The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_LS483488	Helicobacter pylori NCTC 11637 = CCUG 17874 = ATCC 43504 strain NCTC 11637 chromosome 1	1680937	58368	69256	1680937		uncultured_Caudovirales_phage(33.33%)	9	NA	NA
WP_162296836.1|58368_60414_+	DNA helicase UvrD	NA	A7KV33	Bacillus_phage	34.6	4.1e-91
WP_108169443.1|60410_61067_+	flagellar basal body P-ring formation protein FlgA	NA	NA	NA	NA	NA
WP_000780122.1|61076_61640_+	UbiX family flavin prenyltransferase	NA	NA	NA	NA	NA
WP_108169444.1|61639_62113_+	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	45.5	3.3e-28
WP_108169445.1|62114_62690_+	dTMP kinase	NA	Q2XUX0	environmental_halophage	37.2	2.2e-10
WP_108169446.1|62677_63253_+	ComF family protein	NA	NA	NA	NA	NA
WP_108169963.1|63285_65325_+	N-6 DNA methylase	NA	A0A2H4JBT5	uncultured_Caudovirales_phage	57.7	2.6e-210
WP_108169447.1|65321_66515_+	restriction endonuclease subunit S	NA	A0A2H4J4K4	uncultured_Caudovirales_phage	30.0	5.8e-05
WP_108169448.1|66580_69256_+	DNA polymerase I	NA	A0A218MKQ4	uncultured_virus	37.3	8.3e-60
>prophage 2
NZ_LS483488	Helicobacter pylori NCTC 11637 = CCUG 17874 = ATCC 43504 strain NCTC 11637 chromosome 1	1680937	387102	423865	1680937	protease,transposase,integrase,tRNA	Helicobacter_phage(30.77%)	37	384353:384368	425724:425739
384353:384368	attL	AAAAGCGATTTTGATA	NA	NA	NA	NA
WP_108169655.1|387102_388347_+	DNA cytosine methyltransferase	NA	M1PSQ0	Streptococcus_phage	29.2	5.5e-30
WP_108169656.1|388333_389104_+	hypothetical protein	NA	S0A2X1	Cellulophaga_phage	48.1	4.0e-55
WP_108169657.1|389078_390425_+	McrB family protein	NA	M1NSM1	Streptococcus_phage	45.2	2.4e-84
WP_108169658.1|390417_391632_+	LlaJI family restriction endonuclease	NA	Q6DMW8	Streptococcus_phage	36.4	3.2e-67
WP_108169659.1|391712_392735_-	pseudaminic acid synthase	NA	A0A1B1IVE2	uncultured_Mediterranean_phage	34.1	9.0e-31
WP_108169660.1|392739_393381_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	28.7	1.4e-16
WP_108169661.1|393380_394655_-	apolipoprotein N-acyltransferase	NA	NA	NA	NA	NA
WP_001106292.1|394882_395584_+	CvpA family protein	NA	NA	NA	NA	NA
WP_108169663.1|395593_397099_+|tRNA	lysine--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	40.9	4.6e-92
WP_108169664.1|397098_398349_+	serine hydroxymethyltransferase	NA	A0A240F3L3	Aeromonas_phage	52.7	1.8e-105
WP_000138102.1|398359_398902_+	DUF1882 domain-containing protein	NA	NA	NA	NA	NA
WP_108169665.1|398923_399727_+	hypothetical protein	NA	NA	NA	NA	NA
WP_108169666.1|401706_402486_+	hypothetical protein	NA	NA	NA	NA	NA
WP_108169667.1|402505_402799_+	hypothetical protein	NA	NA	NA	NA	NA
WP_108169668.1|402805_404329_+	hypothetical protein	NA	NA	NA	NA	NA
WP_108169669.1|404325_404628_+	virB2 type IV secretion protein	NA	NA	NA	NA	NA
WP_001173702.1|404628_404895_+	hypothetical protein	NA	NA	NA	NA	NA
WP_108169670.1|404887_407311_+	VirB4 family type IV secretion/conjugal transfer ATPase	NA	NA	NA	NA	NA
WP_108169671.1|407313_409347_+	type IA DNA topoisomerase	NA	A0A2K9L5F8	Tupanvirus	31.8	4.7e-47
WP_108169672.1|409463_410633_+	hypothetical protein	NA	NA	NA	NA	NA
WP_108169673.1|410632_412165_+	TrbG/VirB9 family P-type conjugative transfer protein	NA	NA	NA	NA	NA
WP_108169674.1|412164_412533_+	DNA transformation compentancy	NA	NA	NA	NA	NA
WP_108169144.1|412529_413813_-|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A1S5REX3	Helicobacter_phage	86.4	1.9e-203
WP_162296838.1|413864_414311_+|transposase	IS200/IS605 family transposase	transposase	A0A1S5REW8	Helicobacter_phage	98.6	6.8e-76
WP_162296844.1|414397_414682_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000159825.1|414955_415246_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000795431.1|415242_415698_-	hypothetical protein	NA	NA	NA	NA	NA
WP_108169675.1|415694_416636_-	Flp pilus assembly complex ATPase component TadA	NA	NA	NA	NA	NA
WP_108169676.1|416635_416935_-	hypothetical protein	NA	NA	NA	NA	NA
WP_108169677.1|416931_417195_-	hypothetical protein	NA	NA	NA	NA	NA
WP_108169678.1|417184_417481_-	hypothetical protein	NA	NA	NA	NA	NA
WP_162296838.1|418553_419000_-|transposase	IS200/IS605 family transposase	transposase	A0A1S5REW8	Helicobacter_phage	98.6	6.8e-76
WP_108169679.1|419051_420335_+|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A1S5REX3	Helicobacter_phage	85.9	2.7e-202
WP_053577294.1|420412_420691_+	hypothetical protein	NA	NA	NA	NA	NA
WP_108169680.1|420692_421955_+	P-type conjugative transfer protein TrbL	NA	NA	NA	NA	NA
WP_108169681.1|422028_422712_+|protease	CAAX protease	protease	NA	NA	NA	NA
WP_108169682.1|422791_423865_-|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
425724:425739	attR	AAAAGCGATTTTGATA	NA	NA	NA	NA
>prophage 3
NZ_LS483488	Helicobacter pylori NCTC 11637 = CCUG 17874 = ATCC 43504 strain NCTC 11637 chromosome 1	1680937	1296985	1303879	1680937	transposase	Helicobacter_phage(33.33%)	7	NA	NA
WP_108169144.1|1296985_1298269_-|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A1S5REX3	Helicobacter_phage	86.4	1.9e-203
WP_162296838.1|1298320_1298767_+|transposase	IS200/IS605 family transposase	transposase	A0A1S5REW8	Helicobacter_phage	98.6	6.8e-76
WP_108169146.1|1298844_1299531_+	type II restriction endonuclease	NA	A0A076FMQ7	Aureococcus_anophage	38.9	7.4e-29
WP_108169953.1|1300173_1300767_+	Laminin subunit alpha-2 precursor	NA	NA	NA	NA	NA
WP_108169147.1|1300763_1301891_+	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase	NA	A0A2K9L0G1	Tupanvirus	29.7	2.5e-26
WP_000454012.1|1302214_1303240_+	ribonucleotide-diphosphate reductase subunit beta	NA	A2PYN0	Cyanophage	34.3	9.3e-52
WP_108169148.1|1303249_1303879_+	protein-L-isoaspartate O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	38.8	2.3e-21
