assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_902167325.1_chitino_3	NZ_LR632930	Chitinophaga pinensis isolate 3 chromosome 1	1	256439-256540	1	CRISPRCasFinder	no		WYL,csa3,PD-DExK,DEDDh,cas3	Orphan	CCGCGAGGTATGTAGGTTCGAGT	23	1	3	256462-256517|256462-256517|256462-256517	NZ_LR632930.1_256030-256085|NZ_LR632930.1_256174-256229|NZ_LR632930.1_256318-256373	NA	1	1	Orphan	WYL,csa3,PD-DExK,DEDDh,cas3	NA|327aa|up_6|NZ_LR632930.1_246653_247634_-,NA|505aa|up_5|NZ_LR632930.1_247649_249164_-,NA	NA|680aa|up_9|NZ_LR632930.1_243209_245249_-	COG4232, COG4232, Thiol:disulfide interchange protein [Posttranslational modification, protein turnover, chaperones / Energy production and conversion]	NA|152aa|up_8|NZ_LR632930.1_245351_245807_-	pfam11412, DsbC, Disulphide bond corrector protein DsbC	NA|231aa|up_7|NZ_LR632930.1_245859_246552_-	PRK03619, PRK03619, phosphoribosylformylglycinamidine synthase subunit PurQ	NA|327aa|up_6|NZ_LR632930.1_246653_247634_-	NA	NA|505aa|up_5|NZ_LR632930.1_247649_249164_-	NA	NA|307aa|up_4|NZ_LR632930.1_249323_250244_+	TIGR01777, Hypothetical_UPF0105_protein_Rv2216/MT2273/Mb2239	NA|412aa|up_3|NZ_LR632930.1_250248_251484_-	COG0147, TrpE, Anthranilate/para-aminobenzoate synthases component I [Amino acid transport and metabolism / Coenzyme metabolism]	NA|177aa|up_2|NZ_LR632930.1_251544_252075_-	PRK05901, PRK05901, RNA polymerase sigma factor; Provisional	NA|421aa|up_1|NZ_LR632930.1_252172_253435_-	PRK01117, PRK01117, adenylosuccinate synthetase; Provisional	NA|749aa|up_0|NZ_LR632930.1_253513_255760_-	COG0317, SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases [Signal transduction mechanisms / Transcription]	NA|381aa|down_0|NZ_LR632930.1_256659_257802_+	cd02966, TlpA_like_family, TlpA-like family; composed of  TlpA, ResA, DsbE and similar proteins	NA|182aa|down_1|NZ_LR632930.1_257877_258423_-	pfam03168, LEA_2, Late embryogenesis abundant protein	NA|1004aa|down_2|NZ_LR632930.1_258833_261845_-	COG2133, COG2133, Glucose/sorbosone dehydrogenases [Carbohydrate transport and metabolism]	NA|375aa|down_3|NZ_LR632930.1_261863_262988_-	pfam16147, DUF4855, Domain of unknown function (DUF4855)	NA|402aa|down_4|NZ_LR632930.1_262997_264203_-	pfam16389, DUF4998, Domain of unknown function	NA|400aa|down_5|NZ_LR632930.1_264225_265425_-	pfam16391, DUF5000, Domain of unknown function	NA|642aa|down_6|NZ_LR632930.1_265452_267378_-	pfam07980, SusD_RagB, SusD family	NA|1076aa|down_7|NZ_LR632930.1_267404_270632_-	TIGR04056, OMP_RagA_SusC, TonB-linked outer membrane protein, SusC/RagA family	NA|409aa|down_8|NZ_LR632930.1_271173_272400_-	cd17394, MFS_FucP_like, Fucose permease and similar proteins of the Major Facilitator Superfamily of transporters	NA|397aa|down_9|NZ_LR632930.1_272424_273615_-	cd00249, AGE, AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid
GCF_902167325.1_chitino_3	NZ_LR632930	Chitinophaga pinensis isolate 3 chromosome 1	2	1570930-1571025	2	CRISPRCasFinder	no		WYL,csa3,PD-DExK,DEDDh,cas3	Orphan	GAAAGCAAAAGCTGCAGTAAAGGC	24	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,PD-DExK,DEDDh,cas3	NA|221aa|up_7|NZ_LR632930.1_1561028_1561691_+,NA|454aa|up_2|NZ_LR632930.1_1566241_1567603_+,NA|390aa|down_2|NZ_LR632930.1_1576505_1577675_+	NA|431aa|up_9|NZ_LR632930.1_1558452_1559745_-	PRK00077, eno, enolase; Provisional	NA|301aa|up_8|NZ_LR632930.1_1559796_1560699_-	TIGR03522, GldA_ABC_ATP, gliding motility-associated ABC transporter ATP-binding subunit GldA	NA|221aa|up_7|NZ_LR632930.1_1561028_1561691_+	NA	NA|329aa|up_6|NZ_LR632930.1_1561697_1562684_+	pfam04039, MnhB, Domain related to MnhB subunit of Na+/H+ antiporter	NA|589aa|up_5|NZ_LR632930.1_1562746_1564513_+	cd07185, OmpA_C-like, Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA	NA|261aa|up_4|NZ_LR632930.1_1564576_1565359_+	COG0600, TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism]	NA|268aa|up_3|NZ_LR632930.1_1565358_1566162_+	COG1116, TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]	NA|454aa|up_2|NZ_LR632930.1_1566241_1567603_+	NA	NA|136aa|up_1|NZ_LR632930.1_1567658_1568066_-	pfam14229, DUF4332, Domain of unknown function (DUF4332)	NA|566aa|up_0|NZ_LR632930.1_1568187_1569885_+	pfam01551, Peptidase_M23, Peptidase family M23	NA|517aa|down_0|NZ_LR632930.1_1571296_1572847_-	TIGR03524, gliding_motility_protein_GldJ, gliding motility-associated lipoprotein GldJ	NA|1123aa|down_1|NZ_LR632930.1_1573019_1576388_+	cd02258, Peptidase_C25_N, Peptidase C25 family N-terminal domain, found in Arg-gingipain (Rgp), Lys-gingipain (Kgp) and related proteins	NA|390aa|down_2|NZ_LR632930.1_1576505_1577675_+	NA	NA|161aa|down_3|NZ_LR632930.1_1577769_1578252_+	pfam02542, YgbB, YgbB family	NA|148aa|down_4|NZ_LR632930.1_1578283_1578727_+	PRK00601, dut, dUTP diphosphatase	NA|581aa|down_5|NZ_LR632930.1_1578729_1580472_+	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein	NA|278aa|down_6|NZ_LR632930.1_1580504_1581338_+	pfam14125, DUF4292, Domain of unknown function (DUF4292)	NA|479aa|down_7|NZ_LR632930.1_1581388_1582825_+	COG4942, COG4942, Membrane-bound metallopeptidase [Cell division and chromosome partitioning]	NA|380aa|down_8|NZ_LR632930.1_1582898_1584038_-	TIGR03999, thiol_BshA, N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA	NA|457aa|down_9|NZ_LR632930.1_1584121_1585492_+	cd03883, M28_Pgcp_like, M28 Zn-Peptidase Plasma glutamate carboxypeptidase
GCF_902167325.1_chitino_3	NZ_LR632930	Chitinophaga pinensis isolate 3 chromosome 1	3	3721003-3721097	3	CRISPRCasFinder	no		WYL,csa3,PD-DExK,DEDDh,cas3	Orphan	GTCGCCATTCAGATCGTCGAGCC	23	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,PD-DExK,DEDDh,cas3	NA|725aa|up_9|NZ_LR632930.1_3707576_3709751_+,NA|195aa|up_8|NZ_LR632930.1_3709774_3710359_+,NA|131aa|up_6|NZ_LR632930.1_3711817_3712210_+,NA|199aa|up_5|NZ_LR632930.1_3712680_3713277_+,NA|162aa|up_4|NZ_LR632930.1_3713420_3713906_+,NA|193aa|down_2|NZ_LR632930.1_3724377_3724956_-,NA|62aa|down_3|NZ_LR632930.1_3725071_3725257_+,NA|118aa|down_4|NZ_LR632930.1_3725370_3725724_+,NA|253aa|down_5|NZ_LR632930.1_3725733_3726492_-	NA|725aa|up_9|NZ_LR632930.1_3707576_3709751_+	NA	NA|195aa|up_8|NZ_LR632930.1_3709774_3710359_+	NA	NA|385aa|up_7|NZ_LR632930.1_3710447_3711602_+	cd15482, Sialidase_non-viral, Non-viral sialidases	NA|131aa|up_6|NZ_LR632930.1_3711817_3712210_+	NA	NA|199aa|up_5|NZ_LR632930.1_3712680_3713277_+	NA	NA|162aa|up_4|NZ_LR632930.1_3713420_3713906_+	NA	NA|420aa|up_3|NZ_LR632930.1_3713974_3715234_-	pfam07995, GSDH, Glucose / Sorbosone dehydrogenase	NA|191aa|up_2|NZ_LR632930.1_3715301_3715874_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|466aa|up_1|NZ_LR632930.1_3715887_3717285_-	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|138aa|up_0|NZ_LR632930.1_3717361_3717775_+	COG1733, COG1733, Predicted transcriptional regulators [Transcription]	NA|381aa|down_0|NZ_LR632930.1_3721598_3722741_-	cd02248, Peptidase_C1A, Peptidase C1A subfamily (MEROPS database nomenclature); composed of cysteine peptidases (CPs) similar to papain, including the mammalian CPs (cathepsins B, C, F, H, L, K, O, S, V, X and W)	NA|518aa|down_1|NZ_LR632930.1_3722819_3724373_-	cd03399, SPFH_flotillin, Flotillin or reggie family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily	NA|193aa|down_2|NZ_LR632930.1_3724377_3724956_-	NA	NA|62aa|down_3|NZ_LR632930.1_3725071_3725257_+	NA	NA|118aa|down_4|NZ_LR632930.1_3725370_3725724_+	NA	NA|253aa|down_5|NZ_LR632930.1_3725733_3726492_-	NA	NA|258aa|down_6|NZ_LR632930.1_3726936_3727710_-	pfam03867, FTZ, Fushi tarazu (FTZ), N-terminal region	NA|509aa|down_7|NZ_LR632930.1_3728032_3729559_+	cd16031, G6S_like, unchracterized sulfatase homologous to glucosamine (N-acetyl)-6-sulfatase(G6S, GNS)	NA|741aa|down_8|NZ_LR632930.1_3729589_3731812_-	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel	NA|1298aa|down_9|NZ_LR632930.1_3731898_3735792_-	pfam14200, RicinB_lectin_2, Ricin-type beta-trefoil lectin domain-like
GCF_902167325.1_chitino_3	NZ_LR632930	Chitinophaga pinensis isolate 3 chromosome 1	4	4113276-4113442	1	PILER-CR	no		WYL,csa3,PD-DExK,DEDDh,cas3	Orphan	CAACCTCTTATGTGAGGTCATTCAGAAAGGCAGGA	35	0	0	NA	NA	NA	2	2	Orphan	WYL,csa3,PD-DExK,DEDDh,cas3	NA|182aa|up_1|NZ_LR632930.1_4111372_4111918_+,NA|261aa|up_0|NZ_LR632930.1_4112024_4112807_-,NA|86aa|down_1|NZ_LR632930.1_4114987_4115245_-,NA|131aa|down_3|NZ_LR632930.1_4117776_4118169_+,NA|198aa|down_9|NZ_LR632930.1_4123069_4123663_-	NA|428aa|up_9|NZ_LR632930.1_4102099_4103383_+	COG0427, ACH1, Acetyl-CoA hydrolase [Energy production and conversion]	NA|233aa|up_8|NZ_LR632930.1_4103386_4104085_-	pfam12146, Hydrolase_4, Serine aminopeptidase, S33	NA|99aa|up_7|NZ_LR632930.1_4104000_4104297_-	COG2267, PldB, Lysophospholipase [Lipid metabolism]	NA|439aa|up_6|NZ_LR632930.1_4104676_4105993_+	pfam16819, DUF5074, Domain of unknown function (DUF5074)	NA|665aa|up_5|NZ_LR632930.1_4105995_4107990_+	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel	NA|379aa|up_4|NZ_LR632930.1_4108004_4109141_+	COG3391, COG3391, Uncharacterized conserved protein [Function unknown]	NA|392aa|up_3|NZ_LR632930.1_4109177_4110353_+	pfam16820, PKD_3, PKD-like domain	NA|302aa|up_2|NZ_LR632930.1_4110420_4111326_+	pfam00924, MS_channel, Mechanosensitive ion channel	NA|182aa|up_1|NZ_LR632930.1_4111372_4111918_+	NA	NA|261aa|up_0|NZ_LR632930.1_4112024_4112807_-	NA	NA|327aa|down_0|NZ_LR632930.1_4113827_4114808_-	pfam04338, DUF481, Protein of unknown function, DUF481	NA|86aa|down_1|NZ_LR632930.1_4114987_4115245_-	NA	NA|727aa|down_2|NZ_LR632930.1_4115499_4117680_+	pfam00930, DPPIV_N, Dipeptidyl peptidase IV (DPP IV) N-terminal region	NA|131aa|down_3|NZ_LR632930.1_4117776_4118169_+	NA	NA|212aa|down_4|NZ_LR632930.1_4118240_4118876_-	pfam01988, VIT1, VIT family	NA|412aa|down_5|NZ_LR632930.1_4118872_4120108_-	TIGR01885, Ornithine_aminotransferase, ornithine aminotransferase	NA|87aa|down_6|NZ_LR632930.1_4120116_4120377_-	pfam00887, ACBP, Acyl CoA binding protein	NA|598aa|down_7|NZ_LR632930.1_4120552_4122346_+	PRK05433, PRK05433, GTP-binding protein LepA; Provisional	NA|220aa|down_8|NZ_LR632930.1_4122338_4122998_+	cd01994, Alpha_ANH_like_IV, This is a subfamily of Adenine nucleotide alpha hydrolases superfamily	NA|198aa|down_9|NZ_LR632930.1_4123069_4123663_-	NA
GCF_902167325.1_chitino_3	NZ_LR632930	Chitinophaga pinensis isolate 3 chromosome 1	5	5178795-5178928	4	CRISPRCasFinder	no		WYL,csa3,PD-DExK,DEDDh,cas3	Orphan	TAATTGCGCTGTAATTGTACGCTA	24	2	3	5178819-5178849|5178819-5178849|5178874-5178904	NZ_LR632930.1_5899901-5899871|NZ_LR632930.1_2776276-2776306|NZ_LR632930.1_728688-728658	NA	2	2	Orphan	WYL,csa3,PD-DExK,DEDDh,cas3	NA,NA|132aa|down_4|NZ_LR632930.1_5182516_5182912_-,NA|115aa|down_6|NZ_LR632930.1_5183459_5183804_-	NA|157aa|up_9|NZ_LR632930.1_5169435_5169906_-	PRK00901, PRK00901, methylated-DNA--protein-cysteine methyltransferase; Provisional	NA|157aa|up_8|NZ_LR632930.1_5169902_5170373_-	pfam12867, DinB_2, DinB superfamily	NA|471aa|up_7|NZ_LR632930.1_5170466_5171879_+	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]	NA|372aa|up_6|NZ_LR632930.1_5171944_5173060_-	pfam12698, ABC2_membrane_3, ABC-2 family transporter protein	NA|369aa|up_5|NZ_LR632930.1_5173059_5174166_-	pfam12698, ABC2_membrane_3, ABC-2 family transporter protein	NA|244aa|up_4|NZ_LR632930.1_5174169_5174901_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|305aa|up_3|NZ_LR632930.1_5174897_5175812_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|299aa|up_2|NZ_LR632930.1_5175818_5176715_-	PRK03598, PRK03598, putative efflux pump membrane fusion protein; Provisional	NA|419aa|up_1|NZ_LR632930.1_5176717_5177974_-	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion]	NA|203aa|up_0|NZ_LR632930.1_5178023_5178632_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|162aa|down_0|NZ_LR632930.1_5179151_5179637_-	cd00586, 4HBT, 4-hydroxybenzoyl-CoA thioesterase (4HBT)	NA|253aa|down_1|NZ_LR632930.1_5179769_5180528_-	PRK06500, PRK06500, SDR family oxidoreductase	NA|90aa|down_2|NZ_LR632930.1_5180586_5180856_-	pfam12840, HTH_20, Helix-turn-helix domain	NA|491aa|down_3|NZ_LR632930.1_5180919_5182392_-	PRK01642, cls, cardiolipin synthetase; Reviewed	NA|132aa|down_4|NZ_LR632930.1_5182516_5182912_-	NA	NA|175aa|down_5|NZ_LR632930.1_5182938_5183463_-	pfam13801, Metal_resist, Heavy-metal resistance	NA|115aa|down_6|NZ_LR632930.1_5183459_5183804_-	NA	NA|189aa|down_7|NZ_LR632930.1_5183849_5184416_-	COG1595, RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription]	NA|975aa|down_8|NZ_LR632930.1_5184467_5187392_-	pfam14905, OMP_b-brl_3, Outer membrane protein beta-barrel family	NA|801aa|down_9|NZ_LR632930.1_5187512_5189915_-	COG1506, DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
