Pfam ID	int Pfam ID	domain	int domain
pfam02739	pfam09293	5_3_exonuc_N	RNaseH_C
pfam02872	pfam00149	5_nucleotid_C	Metallophos
pfam00004	pfam02933	AAA	CDC48_2
pfam00004	pfam02916	AAA	DNA_PPF
pfam00004	pfam09116	AAA	gp45-slide_C
pfam13604	pfam18343	AAA_30	SH3_14
pfam13604	pfam07057	AAA_30	TraI
pfam17871	pfam10431	AAA_lid_9	ClpB_D2-small
pfam17871	pfam02861	AAA_lid_9	Clp_N
pfam00583	pfam18014	Acetyltransf_1	Acetyltransf_18
pfam01842	pfam00551	ACT	Formyl_trans_N
pfam13602	pfam08659	ADH_zinc_N_2	KR
pfam03496	pfam00071	ADPrib_exo_Tox	Ras
pfam00578	pfam13905	AhpC-TSA	Thioredoxin_8
pfam00586	pfam18072	AIRS	FGAR-AT_linker
pfam02769	pfam18072	AIRS_C	FGAR-AT_linker
pfam01263	pfam01370	Aldose_epim	Epimerase
pfam01510	pfam14700	Amidase_2	RPOL_N
pfam01520	pfam04122	Amidase_3	CW_binding_2
pfam13193	pfam00551	AMP-binding_C	Formyl_trans_N
pfam12895	pfam18801	ANAPC3	RapH_N
pfam12894	pfam00270	ANAPC4_WD40	DEAD
pfam00023	pfam07679	Ank	I-set
pfam00023	pfam00069	Ank	Pkinase
pfam00023	pfam00071	Ank	Ras
pfam12796	pfam00025	Ank_2	Arf
pfam12796	pfam07679	Ank_2	I-set
pfam12796	pfam00069	Ank_2	Pkinase
pfam12796	pfam00071	Ank_2	Ras
pfam13637	pfam00069	Ank_4	Pkinase
pfam13637	pfam00071	Ank_4	Ras
pfam13857	pfam00069	Ank_5	Pkinase
pfam01636	pfam00128	APH	Alpha-amylase
pfam03869	pfam11423	Arc	Repressor_Mnt
pfam09003	pfam07825	Arm-DNA-bind_1	Exc
pfam00308	pfam02767	Bac_DnaA	DNA_pol3_beta_2
pfam16774	pfam16792	Baseplate	Caudo_bapla16
pfam16774	pfam08931	Baseplate	Caudo_bapla_RBP
pfam10996	pfam00753	Beta-Casp	Lactamase_B
pfam02929	pfam02837	Bgal_small_N	Glyco_hydro_2_N
pfam05588	pfam17993	Botulinum_HA-17	HA70_C
pfam00528	pfam01547	BPD_transp_1	SBP_bac_1
pfam00528	pfam13416	BPD_transp_1	SBP_bac_8
pfam10651	pfam05709	BppU_N	Sipho_tail
pfam06616	pfam17728	BsuBI_PstI_RE	BsuBI_PstI_RE_N
pfam08332	pfam00069	CaMKII_AD	Pkinase
pfam00188	pfam14504	CAP	CAP_assoc_N
pfam16861	pfam02543	Carbam_trans_C	Carbam_trans_N
pfam00194	pfam07679	Carb_anhydrase	I-set
pfam09611	pfam09614	Cas_Csy1	Cas_Csy2
pfam09611	pfam09615	Cas_Csy1	Cas_Csy3
pfam09614	pfam09615	Cas_Csy2	Cas_Csy3
pfam09615	pfam09618	Cas_Csy3	Cas_Csy4
pfam00689	pfam08282	Cation_ATPase_C	Hydrolase_3
pfam16792	pfam08931	Caudo_bapla16	Caudo_bapla_RBP
pfam01845	pfam00521	CcdB	DNA_topoisoIV
pfam02754	pfam07992	CCG	Pyr_redox_2
pfam03498	pfam03372	CDtoxinA	Exo_endo_phos
pfam05257	pfam08460	CHAP	SH3_5
pfam01584	pfam02518	CheW	HATPase_c
pfam13690	pfam00072	CheX	Response_reg
pfam00504	pfam00124	Chloroa_b-bind	Photo_RC
pfam00385	pfam00145	Chromo	DNA_methylase
pfam03505	pfam17993	Clenterotox	HA70_C
pfam10431	pfam00227	ClpB_D2-small	Proteasome
pfam02617	pfam02861	ClpS	Clp_N
pfam01817	pfam00793	CM_2	DAHP_synth_1
pfam17839	pfam00149	CNP_C_terminal	Metallophos
pfam08764	pfam00089	Coagulase	Trypsin
pfam00135	pfam13927	COesterase	Ig_3
pfam07484	pfam14928	Collar	S_tail_recep_bd
pfam11546	pfam00089	CompInhib_SCIN	Trypsin
pfam18710	pfam01381	ComR_TPR	HTH_3
pfam00668	pfam00067	Condensation	p450
pfam00166	pfam00118	Cpn10	Cpn60_TCP1
pfam02786	pfam02787	CPSase_L_D2	CPSase_L_D3
pfam02787	pfam00988	CPSase_L_D3	CPSase_sm_chain
pfam02787	pfam00117	CPSase_L_D3	GATase
pfam02537	pfam00041	CRCB	fn3
pfam00313	pfam00076	CSD	RRM_1
pfam16710	pfam06519	CTXphi_pIII-N1	TolA
pfam00190	pfam07883	Cupin_1	Cupin_2
pfam00283	pfam00124	Cytochrom_B559	Photo_RC
pfam00284	pfam00124	Cytochrom_B559a	Photo_RC
pfam14495	pfam00124	Cytochrom_C550	Photo_RC
pfam01678	pfam00293	DAP_epimerase	NUDIX
pfam18430	pfam01381	DBD_HTH	HTH_3
pfam02914	pfam09039	DDE_2	HTH_Tnp_Mu_2
pfam01609	pfam02281	DDE_Tnp_1	Dimer_Tnp_Tn5
pfam01609	pfam14706	DDE_Tnp_1	Tnp_DNA_bind
pfam01368	pfam02272	DHH	DHHA1
pfam01368	pfam02833	DHH	DHHA2
pfam10418	pfam07992	DHODB_Fe-S_bind	Pyr_redox_2
pfam01487	pfam18317	DHquinase_I	SDH_C
pfam01487	pfam08501	DHquinase_I	Shikimate_dh_N
pfam17587	pfam15935	Dmd	RnlA_toxin
pfam10410	pfam13155	DnaB_bind	Toprim_2
pfam07319	pfam01695	DnaI_N	IstB_IS21
pfam00226	pfam13591	DnaJ	MerR_2
pfam00226	pfam00069	DnaJ	Pkinase
pfam00986	pfam03884	DNA_gyraseB_C	YacG
pfam01653	pfam14520	DNA_ligase_aden	HHH_5
pfam01068	pfam14743	DNA_ligase_A_M	DNA_ligase_OB_2
pfam03120	pfam01653	DNA_ligase_OB	DNA_ligase_aden
pfam03120	pfam03119	DNA_ligase_OB	DNA_ligase_ZBD
pfam03119	pfam14520	DNA_ligase_ZBD	HHH_5
pfam00712	pfam02767	DNA_pol3_beta	DNA_pol3_beta_2
pfam00712	pfam01336	DNA_pol3_beta	tRNA_anti-codon
pfam01612	pfam18305	DNA_pol_A_exo1	DNA_pol_A_exoN
pfam00521	pfam18053	DNA_topoisoIV	GyrB_insert
pfam08148	pfam00271	DSHCT	Helicase_C
pfam00782	pfam00069	DSPc	Pkinase
pfam08338	pfam01370	DUF1731	Epimerase
pfam10832	pfam02661	DUF2559	Fic
pfam11611	pfam17118	DUF4352	DUF5105
pfam00563	pfam00990	EAL	GGDEF
pfam00563	pfam00072	EAL	Response_reg
pfam00378	pfam00072	ECH_1	Response_reg
pfam00036	pfam00069	EF-hand_1	Pkinase
pfam13405	pfam00069	EF-hand_6	Pkinase
pfam13499	pfam00069	EF-hand_7	Pkinase
pfam13499	pfam00085	EF-hand_7	Thioredoxin
pfam03764	pfam01668	EFG_IV	SmpB
pfam00889	pfam03431	EF_TS	RNA_replicase_B
pfam01223	pfam01353	Endonuclease_NS	GFP
pfam01223	pfam01663	Endonuclease_NS	Phosphodiest
pfam12217	pfam12219	End_beta_propel	End_tail_spike
pfam12218	pfam12217	End_N_terminal	End_beta_propel
pfam12218	pfam12219	End_N_terminal	End_tail_spike
pfam00113	pfam03952	Enolase_C	Enolase_N
pfam01375	pfam01376	Enterotoxin_a	Enterotoxin_b
pfam01370	pfam02911	Epimerase	Formyl_trans_C
pfam01370	pfam16363	Epimerase	GDP_Man_Dehyd
pfam01370	pfam01058	Epimerase	Oxidored_q6
pfam00275	pfam03863	EPSP_synthase	Phage_mat-A
pfam14011	pfam00823	ESX-1_EspG	PPE
pfam00754	pfam04616	F5_F8_type_C	Glyco_hydro_43
pfam00754	pfam05089	F5_F8_type_C	NAGLU
pfam00754	pfam12972	F5_F8_type_C	NAGLU_C
pfam00111	pfam00067	Fer2	p450
pfam13353	pfam13186	Fer4_12	SPASM
pfam13183	pfam07992	Fer4_8	Pyr_redox_2
pfam00254	pfam00069	FKBP_C	Pkinase
pfam00254	pfam07714	FKBP_C	Pkinase_Tyr
pfam01590	pfam00990	GAF	GGDEF
pfam06064	pfam17946	Gam	RecC_C
pfam06064	pfam00580	Gam	UvrD-helicase
pfam06064	pfam13361	Gam	UvrD_C
pfam00535	pfam00652	Glycos_transf_2	Ricin_B_lectin
pfam18565	pfam02837	Glyco_hydro2_C5	Glyco_hydro_2_N
pfam00232	pfam07679	Glyco_hydro_1	I-set
pfam00703	pfam02837	Glyco_hydro_2	Glyco_hydro_2_N
pfam02836	pfam02837	Glyco_hydro_2_C	Glyco_hydro_2_N
pfam08244	pfam00251	Glyco_hydro_32C	Glyco_hydro_32N
pfam01228	pfam02901	Gly_radical	PFL-like
pfam06714	pfam00959	Gp5_OB	Phage_lysozyme
pfam04965	pfam05947	GPW_gp25	T6SS_TssF
pfam04965	pfam06996	GPW_gp25	T6SS_TssG
pfam00009	pfam03431	GTP_EFTU	RNA_replicase_B
pfam03144	pfam03431	GTP_EFTU_D2	RNA_replicase_B
pfam03143	pfam03431	GTP_EFTU_D3	RNA_replicase_B
pfam02895	pfam02518	H-kinase_dim	HATPase_c
pfam00672	pfam02518	HAMP	HATPase_c
pfam00672	pfam00512	HAMP	HisKA
pfam02518	pfam00512	HATPase_c	HisKA
pfam02518	pfam00183	HATPase_c	HSP90
pfam02518	pfam00072	HATPase_c	Response_reg
pfam13589	pfam00183	HATPase_c_3	HSP90
pfam09008	pfam11650	Head_binding	P22_Tail-4
pfam09008	pfam09251	Head_binding	PhageP22-tail
pfam02985	pfam00149	HEAT	Metallophos
pfam02985	pfam00069	HEAT	Pkinase
pfam13646	pfam00149	HEAT_2	Metallophos
pfam13646	pfam00069	HEAT_2	Pkinase
pfam03130	pfam00091	HEAT_PBS	Tubulin
pfam00512	pfam00072	HisKA	Response_reg
pfam00512	pfam08970	HisKA	Sda
pfam07730	pfam00072	HisKA_3	Response_reg
pfam00403	pfam00080	HMA	Sod_Cu
pfam01844	pfam18541	HNH	RuvC_III
pfam07475	pfam00381	Hpr_kinase_C	PTS-HPr
pfam01627	pfam00072	Hpt	Response_reg
pfam00183	pfam00069	HSP90	Pkinase
pfam12833	pfam13377	HTH_18	Peripla_BP_3
pfam01418	pfam01380	HTH_6	SIS
pfam02316	pfam09299	HTH_Tnp_Mu_1	Mu-transpos_C
pfam01155	pfam10609	HypA	ParA
pfam07679	pfam00047	I-set	ig
pfam07679	pfam13895	I-set	Ig_2
pfam07679	pfam13927	I-set	Ig_3
pfam07679	pfam13306	I-set	LRR_5
pfam07679	pfam13855	I-set	LRR_8
pfam07679	pfam00069	I-set	Pkinase
pfam07679	pfam17136	I-set	ribosomal_L24
pfam07679	pfam13416	I-set	SBP_bac_8
pfam04140	pfam00041	ICMT	fn3
pfam08858	pfam08864	IDEAL	UPF0302
pfam01008	pfam00483	IF-2B	NTP_transferase
pfam00707	pfam01176	IF3_C	eIF-1a
pfam13895	pfam00047	Ig_2	ig
pfam13895	pfam13927	Ig_2	Ig_3
pfam13927	pfam00047	Ig_3	ig
pfam13927	pfam13855	Ig_3	LRR_8
pfam05922	pfam00082	Inhibitor_I9	Peptidase_S8
pfam00520	pfam00092	Ion_trans	VWA
pfam07885	pfam02254	Ion_trans_2	TrkA_N
pfam00225	pfam00091	Kinesin	Tubulin
pfam00356	pfam00532	LacI	Peripla_BP_1
pfam00356	pfam13377	LacI	Peripla_BP_3
pfam00961	pfam14528	LAGLIDADG_1	LAGLIDADG_3
pfam12544	pfam04055	LAM_C	Radical_SAM
pfam04072	pfam00149	LCM	Metallophos
pfam16881	pfam04055	LIAS_N	Radical_SAM
pfam13855	pfam00047	LRR_8	ig
pfam03642	pfam00089	MAP	Trypsin
pfam00149	pfam00595	Metallophos	PDZ
pfam00149	pfam00160	Metallophos	Pro_isomerase
pfam00149	pfam13558	Metallophos	SbcCD_C
pfam00149	pfam00515	Metallophos	TPR_1
pfam00149	pfam13431	Metallophos	TPR_17
pfam01420	pfam08684	Methylase_S	ocr
pfam08421	pfam13489	Methyltransf_13	Methyltransf_23
pfam08484	pfam13489	Methyltransf_14	Methyltransf_23
pfam10672	pfam17785	Methyltrans_SAM	PUA_3
pfam10672	pfam01170	Methyltrans_SAM	UPF0020
pfam11873	pfam01464	Mltc_N	SLT
pfam03176	pfam00959	MMPL	Phage_lysozyme
pfam03476	pfam00959	MOSC_N	Phage_lysozyme
pfam04471	pfam18062	Mrr_cat	RE_AspBHI_N
pfam01716	pfam00124	MSP	Photo_RC
pfam02384	pfam08684	N6_Mtase	ocr
pfam02384	pfam18135	N6_Mtase	Type_ISP_C
pfam14833	pfam03446	NAD_binding_11	NAD_binding_2
pfam07993	pfam00550	NAD_binding_4	PP-binding
pfam04095	pfam17956	NAPRTase	NAPRTase_C
pfam08470	pfam07951	NTNH_C	Toxin_R_bind_C
pfam08470	pfam07953	NTNH_C	Toxin_R_bind_N
pfam00691	pfam07676	OmpA	PD40
pfam00691	pfam02412	OmpA	TSP_3
pfam07194	pfam00072	P2	Response_reg
pfam11650	pfam16510	P22_Tail-4	P22_portal
pfam03551	pfam10400	PadR	Vir_act_alpha_C
pfam00989	pfam00072	PAS	Response_reg
pfam00595	pfam00041	PDZ	fn3
pfam00934	pfam00823	PE	PPE
pfam01551	pfam08460	Peptidase_M23	SH3_5
pfam01742	pfam07951	Peptidase_M27	Toxin_R_bind_C
pfam01742	pfam07953	Peptidase_M27	Toxin_R_bind_N
pfam01742	pfam07952	Peptidase_M27	Toxin_trans
pfam00082	pfam00041	Peptidase_S8	fn3
pfam00082	pfam06280	Peptidase_S8	fn3_5
pfam00082	pfam12580	Peptidase_S8	TPPII
pfam02304	pfam02305	Phage_B	Phage_F
pfam05065	pfam16722	Phage_capsid	SAPIS-gp6
pfam16452	pfam07022	Phage_CI_C	Phage_CI_repr
pfam05357	pfam06519	Phage_Coat_A	TolA
pfam02305	pfam02925	Phage_F	gpD
pfam02305	pfam02306	Phage_F	Phage_G
pfam06890	pfam18715	Phage_Mu_Gp45	Phage_spike
pfam00124	pfam00737	Photo_RC	PsbH
pfam00124	pfam02532	Photo_RC	PsbI
pfam00124	pfam01788	Photo_RC	PsbJ
pfam00124	pfam05151	Photo_RC	PsbM
pfam00124	pfam01789	Photo_RC	PsbP
pfam00124	pfam06596	Photo_RC	PsbX
pfam02811	pfam13263	PHP	PHP_C
pfam00069	pfam00027	Pkinase	cNMP_binding
pfam00069	pfam00041	Pkinase	fn3
pfam00069	pfam00581	Pkinase	Rhodanese
pfam00069	pfam00076	Pkinase	RRM_1
pfam00069	pfam00575	Pkinase	S1
pfam07715	pfam03544	Plug	TonB_C
pfam12627	pfam12626	PolyA_pol_RNAbd	PolyA_pol_arg_C
pfam08485	pfam02719	Polysacc_syn_2C	Polysacc_synt_2
pfam00550	pfam00067	PP-binding	p450
pfam14572	pfam13793	Pribosyl_synth	Pribosyltran_N
pfam14464	pfam02597	Prok-JAB	ThiS
pfam00421	pfam00124	PSII	Photo_RC
pfam00381	pfam00532	PTS-HPr	Peripla_BP_1
pfam00381	pfam13377	PTS-HPr	Peripla_BP_3
pfam00381	pfam02255	PTS-HPr	PTS_IIA
pfam04055	pfam13186	Radical_SAM	SPASM
pfam00071	pfam07719	Ras	TPR_2
pfam02132	pfam13662	RecR	Toprim_4
pfam00072	pfam00158	Response_reg	Sigma54_activat
pfam00072	pfam14689	Response_reg	SPOB_a
pfam00072	pfam14682	Response_reg	SPOB_ab
pfam02482	pfam00380	Ribosomal_S30AE	Ribosomal_S9
pfam00333	pfam01668	Ribosomal_S5	SmpB
pfam00164	pfam01668	Ribosom_S12_S23	SmpB
pfam09414	pfam18043	RNA_ligase	T4_Rnl2_C
pfam16857	pfam03979	RNA_pol_inhib	Sigma70_r1_1
pfam05000	pfam01258	RNA_pol_Rpb1_4	zf-dskA_traR
pfam04998	pfam16857	RNA_pol_Rpb1_5	RNA_pol_inhib
pfam04563	pfam16857	RNA_pol_Rpb2_1	RNA_pol_inhib
pfam00562	pfam00027	RNA_pol_Rpb2_6	cNMP_binding
pfam00562	pfam04963	RNA_pol_Rpb2_6	Sigma54_CBD
pfam00562	pfam04552	RNA_pol_Rpb2_6	Sigma54_DBD
pfam00562	pfam04546	RNA_pol_Rpb2_6	Sigma70_ner
pfam00562	pfam18339	RNA_pol_Rpb2_6	Tudor_1_RapA
pfam03431	pfam00575	RNA_replicase_B	S1
pfam16751	pfam08281	RsdA_SigD_bd	Sigma70_r4_2
pfam13456	pfam13416	RVT_3	SBP_bac_8
pfam13416	pfam00041	SBP_bac_8	fn3
pfam00263	pfam03958	Secretin	Secretin_N
pfam00856	pfam00622	SET	SPRY
pfam04542	pfam13490	Sigma70_r2	zf-HC2
pfam08281	pfam13490	Sigma70_r4_2	zf-HC2
pfam01464	pfam14718	SLT	SLT_L
pfam09199	pfam02876	SSL_OB	Stap_Strp_tox_C
pfam02821	pfam00089	Staphylokinase	Trypsin
pfam02876	pfam01123	Stap_Strp_tox_C	Stap_Strp_toxin
pfam07678	pfam00092	TED_complement	VWA
pfam03544	pfam00593	TonB_C	TonB_dep_Rec
pfam07951	pfam07953	Toxin_R_bind_C	Toxin_R_bind_N
pfam07951	pfam07952	Toxin_R_bind_C	Toxin_trans
pfam07953	pfam07952	Toxin_R_bind_N	Toxin_trans
pfam00654	pfam00041	Voltage_CLC	fn3