Seq Id Detection tag Gene (Total / Viral / PFAM / Unknown ) Affiliation of viral sequence (LCA on best BLAST hits) Taxonomic affiliation of host genome Host species/strain Sequence type Sequence structure Cluster Actinobacteria_gi_223955933-488-36693 hallmark;refseq;vdb 59;21;5;33 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Actinobacteria;Actinobacteria;Bifidobacteriales;Bifidobacteriaceae;Bifidobacterium Bifidobacterium longum subsp. infantis CCUG 52486 prophage linear Cluster_207 Actinobacteria_gi_224581105 hallmark 123;14;10;99 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Streptomycetaceae;Streptomyces Streptomyces himastatinicus ATCC 53653 extrachromosomal linear Cluster_602 Actinobacteria_gi_227870386 hallmark;refseq 65;26;6;33 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Corynebacteriaceae;Corynebacterium Corynebacterium aurimucosum ATCC 700975 extrachromosomal linear Cluster_445 Actinobacteria_gi_257461662 refseq 12;6;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Pseudonocardiaceae;Saccharopolyspora Saccharopolyspora erythraea NRRL 2338 extrachromosomal linear Cluster_19 Actinobacteria_gi_280966972 hallmark 15;4;4;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Mycobacteriaceae;Mycobacterium Mycobacterium tuberculosis 210 extrachromosomal linear unclustered Actinobacteria_gi_288922759 hallmark;refseq 20;8;;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Phic3unalikevirus;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Frankiaceae;Frankia Frankia sp. EUN1f extrachromosomal linear Cluster_240 Actinobacteria_gi_288922827 hallmark 27;3;3;21 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Frankiaceae;Frankia Frankia sp. EUN1f extrachromosomal linear unclustered Actinobacteria_gi_289705802 hallmark 22;4;1;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Micrococcaceae;Micrococcus Micrococcus luteus SK58 extrachromosomal linear Cluster_544 Actinobacteria_gi_289706249 hallmark 55;12;10;33 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Micrococcaceae;Micrococcus Micrococcus luteus SK58 extrachromosomal linear Cluster_544 Actinobacteria_gi_298253790 hallmark;refseq 55;20;13;22 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Actinobacteria;Actinobacteria;Bifidobacteriales;Bifidobacteriaceae;Gardnerella Gardnerella vaginalis 5-1 extrachromosomal linear Cluster_20 Actinobacteria_gi_309801484 hallmark 97;17;6;74 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Actinobacteria;Actinobacteria;Bifidobacteriales;Bifidobacteriaceae;Bifidobacterium Bifidobacterium dentium JCVIHMP022 extrachromosomal circular Cluster_597 Actinobacteria_gi_317512503 hallmark 35;7;1;27 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Streptomycetaceae;Streptomyces Streptomyces sp. SA3_actF extrachromosomal linear Cluster_240 Actinobacteria_gi_317512533 refseq 23;8;1;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Streptomycetaceae;Streptomyces Streptomyces sp. SA3_actF extrachromosomal linear Cluster_240 Actinobacteria_gi_317512558 refseq 25;11;1;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Streptomycetaceae;Streptomyces Streptomyces sp. SA3_actF extrachromosomal linear Cluster_457 Actinobacteria_gi_317512592 hallmark;refseq 17;7;;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Streptomycetaceae;Streptomyces Streptomyces sp. SA3_actF extrachromosomal linear Cluster_525 Actinobacteria_gi_319434504-31294-49449 hallmark;refseq;vdb 28;7;4;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Actinobacteria;Actinobacteria;Bifidobacteriales;Bifidobacteriaceae;Bifidobacterium Bifidobacterium sp. 12_1_47BFAA prophage linear Cluster_207 Actinobacteria_gi_319434515 hallmark 21;6;1;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Actinobacteria;Actinobacteria;Bifidobacteriales;Bifidobacteriaceae;Bifidobacterium Bifidobacterium sp. 12_1_47BFAA extrachromosomal linear Cluster_207 Actinobacteria_gi_326385254 hallmark;refseq 22;16;;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Gordoniaceae;Gordonia Gordonia neofelifaecis NRRL B-59395 extrachromosomal linear Cluster_394 Actinobacteria_gi_335052661-9901-30151 hallmark;refseq;vdb 22;9;7;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Propionibacteriaceae;Propionibacterium Propionibacterium sp. 409-HC1 prophage linear Cluster_20 Actinobacteria_gi_343927414 hallmark;refseq 79;36;1;42 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Gordoniaceae;Gordonia Gordonia alkanivorans NBRC 16433 extrachromosomal linear Cluster_387 Actinobacteria_gi_345849874-10087-67150 hallmark 80;16;7;57 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Streptomycetaceae;Streptomyces Streptomyces zinciresistens K42 prophage linear Cluster_582 Actinobacteria_gi_358445441 refseq;vdb 10;2;5;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Corynebacteriaceae;Corynebacterium Corynebacterium casei UCMA 3821 extrachromosomal linear Cluster_220 Actinobacteria_gi_367470708-12843-52698 hallmark 59;5;9;45 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Actinobacteria;Actinobacteria;Solirubrobacterales;Patulibacteraceae;Patulibacter Patulibacter medicamentivorans prophage linear unclustered Actinobacteria_gi_383825550 hallmark;refseq 63;27;7;29 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Mycobacteriaceae;Mycobacterium Mycobacterium xenopi RIVM700367 extrachromosomal circular Cluster_78 Actinobacteria_gi_405980663 hallmark;refseq 57;19;5;33 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Actinomycetaceae;Actinomyces Actinomyces turicensis ACS-279-V-Col4 extrachromosomal circular Cluster_57 Actinobacteria_gi_405982617 hallmark 15;6;;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Actinomycetaceae;Actinomyces Actinomyces neuii BVS029A5 extrachromosomal linear Cluster_354 Actinobacteria_gi_408543508-152-15228 hallmark;refseq 10;7;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Phic3unalikevirus;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Streptomycetaceae;Streptomyces Streptomyces somaliensis DSM 40738 prophage linear Cluster_525 Actinobacteria_gi_410685546 hallmark 48;11;7;30 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Streptomycetaceae;Streptomyces Streptomyces sp. FR1 extrachromosomal linear Cluster_610 Actinobacteria_gi_414579940 hallmark;refseq 69;36;8;25 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Mycobacteriaceae;Mycobacterium Mycobacterium abscessus 5S-1215 extrachromosomal linear Cluster_78 Actinobacteria_gi_418422484 hallmark;refseq 92;51;3;38 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Mycobacteriaceae;Mycobacterium Mycobacterium abscessus subsp. bolletii BD extrachromosomal circular Cluster_132 Actinobacteria_gi_419848920 hallmark;refseq 38;11;2;25 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Actinobacteria;Actinobacteria;Bifidobacteriales;Bifidobacteriaceae;Bifidobacterium Bifidobacterium longum subsp. longum 1-6B extrachromosomal linear Cluster_421 Actinobacteria_gi_419853350-0-39534 hallmark;refseq 66;17;6;43 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Actinobacteria;Actinobacteria;Bifidobacteriales;Bifidobacteriaceae;Bifidobacterium Bifidobacterium longum subsp. longum 2-2B prophage linear Cluster_421 Actinobacteria_gi_419859811 hallmark;refseq 42;16;3;23 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Corynebacteriaceae;Corynebacterium Corynebacterium diphtheriae bv. intermedius str. NCTC 5011 extrachromosomal linear Cluster_383 Actinobacteria_gi_419962223 hallmark;refseq 63;30;5;28 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Nocardiaceae;Rhodococcus Rhodococcus opacus M213 extrachromosomal circular Cluster_445 Actinobacteria_gi_420151093 hallmark 16;6;2;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Actinomycetaceae;Actinomyces Actinomyces georgiae F0490 extrachromosomal linear Cluster_394 Actinobacteria_gi_420966112 refseq 31;11;4;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Mycobacteriaceae;Mycobacterium Mycobacterium abscessus 3A-0810-R extrachromosomal linear Cluster_499 Actinobacteria_gi_421010943-4014-41828 hallmark;refseq 50;22;4;24 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Mycobacteriaceae;Mycobacterium Mycobacterium abscessus 3A-0122-R prophage linear Cluster_362 Actinobacteria_gi_421017314 hallmark;refseq 42;17;4;21 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Mycobacteriaceae;Mycobacterium Mycobacterium abscessus 3A-0122-S extrachromosomal linear Cluster_499 Actinobacteria_gi_421031946 hallmark;refseq 37;21;1;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Mycobacteriaceae;Mycobacterium Mycobacterium abscessus 3A-0930-R extrachromosomal linear Cluster_537 Actinobacteria_gi_421037359 hallmark;refseq 22;12;;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Mycobacteriaceae;Mycobacterium Mycobacterium abscessus 3A-0930-S extrachromosomal linear Cluster_537 Actinobacteria_gi_421742321 hallmark;refseq 100;20;7;73 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Streptomycetaceae;Streptomyces Streptomyces sp. SM8 extrachromosomal linear Cluster_539 Actinobacteria_gi_440697762 hallmark 105;20;4;81 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Streptomycetaceae;Streptomyces Streptomyces turgidiscabies Car8 extrachromosomal linear Cluster_582 Actinobacteria_gi_440701504-0-33798 hallmark;refseq 46;16;;30 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Streptomycetaceae;Streptomyces Streptomyces turgidiscabies Car8 prophage linear Cluster_240 Actinobacteria_gi_440705562 hallmark 61;5;16;40 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Streptomycetaceae;Streptomyces Streptomyces turgidiscabies Car8 extrachromosomal linear Cluster_602 Actinobacteria_gi_441157011 hallmark 43;4;14;25 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Streptomycetaceae;Streptomyces Streptomyces rimosus subsp. rimosus ATCC 10970 extrachromosomal linear unclustered Actinobacteria_gi_444434169 hallmark;refseq 43;20;1;22 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Gordoniaceae;Gordonia Gordonia soli NBRC 108243 extrachromosomal linear Cluster_446 Actinobacteria_gi_444434225 refseq 37;10;2;25 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Gordoniaceae;Gordonia Gordonia soli NBRC 108243 extrachromosomal linear unclustered Actinobacteria_gi_458793476 hallmark;refseq 68;29;6;33 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Nocardiaceae;Rhodococcus Rhodococcus ruber BKS 20-38 extrachromosomal linear Cluster_155 Actinobacteria_gi_458877862 hallmark;refseq 62;14;4;44 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Streptomycetaceae;Streptomyces Streptomyces gancidicus BKS 13-15 extrachromosomal linear Cluster_539 Actinobacteria_gi_459042216 hallmark;refseq 76;20;21;35 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Gordoniaceae;Gordonia Gordonia malaquae NBRC 108250 extrachromosomal linear unclustered Actinobacteria_gi_482922633 refseq;vdb 25;6;1;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Actinobacteria;Actinobacteria;unknown;unknown;unknown actinobacterium SCGC AAA024-D14 extrachromosomal linear unclustered Actinobacteria_gi_482936492 hallmark 113;17;8;88 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Micromonosporaceae;Salinispora Salinispora pacifica DSM 45548 extrachromosomal linear Cluster_240 Actinobacteria_gi_482937413 hallmark;refseq 49;14;2;33 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Micromonosporaceae;Salinispora Salinispora pacifica DSM 45544 extrachromosomal linear Cluster_214 Actinobacteria_gi_483039162 hallmark;refseq 18;7;;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Nocardiaceae;Rhodococcus Rhodococcus rhodochrous BKS6-46 extrachromosomal linear Cluster_155 Actinobacteria_gi_483400703-10663-64185 hallmark;refseq 77;53;1;23 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Mycobacteriaceae;Mycobacterium Mycobacterium intracellulare M.i.198 prophage linear Cluster_73 Actinobacteria_gi_483435817-13250-63069 hallmark;refseq 83;74;;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Mycobacteriaceae;Mycobacterium Mycobacterium hassiacum DSM 44199 prophage linear Cluster_103 Actinobacteria_gi_483692900 hallmark;refseq 50;13;2;35 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Streptomycetaceae;Streptomyces Streptomyces vitaminophilus DSM 41686 extrachromosomal linear Cluster_374 Actinobacteria_gi_483966370 hallmark 100;13;12;75 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Frankiaceae;Frankia Frankia sp. BCU110501 extrachromosomal linear Cluster_6 Actinobacteria_gi_483969925 hallmark 49;9;3;37 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Streptomycetaceae;Streptomyces Streptomyces sp. KhCrAH-244 extrachromosomal linear Cluster_581 Actinobacteria_gi_483974391 hallmark;refseq 44;23;3;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Streptomycetaceae;Streptomyces Streptomyces sp. MspMP-M5 extrachromosomal linear Cluster_73 Actinobacteria_gi_483986472 refseq 32;13;;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Nocardioidaceae;Actinopolymorpha Actinopolymorpha alba DSM 45243 extrachromosomal linear Cluster_19 Actinobacteria_gi_483996828 refseq 22;10;2;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Phic3unalikevirus;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Frankiaceae;Frankia Frankia sp. BMG5.12 extrachromosomal circular Cluster_42 Actinobacteria_gi_483999582 hallmark 61;11;3;47 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Thermomonosporaceae;Actinomadura Actinomadura flavalba DSM 45200 extrachromosomal circular Cluster_286 Actinobacteria_gi_484005549 refseq 34;17;1;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Pseudonocardiaceae;Actinokineospora Actinokineospora enzanensis DSM 44649 extrachromosomal linear Cluster_103 Actinobacteria_gi_484011519-11339-40355 hallmark;refseq 35;31;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Micromonosporaceae;Salinispora Salinispora pacifica CNS055 prophage circular Cluster_272 Actinobacteria_gi_484012116-1226-53285 hallmark;refseq 78;40;2;36 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Mycobacteriaceae;Mycobacterium Mycobacterium abscessus 9808 prophage linear Cluster_391 Actinobacteria_gi_484014952 hallmark;refseq 118;23;5;90 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Nocardiopsaceae;Nocardiopsis Nocardiopsis synnemataformans DSM 44143 extrachromosomal linear Cluster_581 Actinobacteria_gi_484017447 hallmark;vdb 17;4;2;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Nocardiopsaceae;Nocardiopsis Nocardiopsis valliformis DSM 45023 extrachromosomal linear Cluster_286 Actinobacteria_gi_484019805 hallmark;refseq 34;16;1;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Nocardiopsaceae;Nocardiopsis Nocardiopsis lucentensis DSM 44048 extrachromosomal linear Cluster_263 Actinobacteria_gi_484021587 hallmark;refseq 21;11;1;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Nocardiopsaceae;Nocardiopsis Nocardiopsis lucentensis DSM 44048 extrachromosomal linear Cluster_263 Actinobacteria_gi_484023173 hallmark;refseq 17;9;;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Phic3unalikevirus;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Nocardiopsaceae;Nocardiopsis Nocardiopsis salina YIM 90010 extrachromosomal linear Cluster_263 Actinobacteria_gi_484023928 hallmark;refseq 49;16;5;28 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Nocardiopsaceae;Nocardiopsis Nocardiopsis salina YIM 90010 extrachromosomal linear Cluster_263 Actinobacteria_gi_484024199 hallmark 63;16;5;42 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Nocardiopsaceae;Nocardiopsis Nocardiopsis gilva YIM 90087 extrachromosomal linear Cluster_286 Actinobacteria_gi_484024972 hallmark;refseq 36;12;4;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;L5likevirus;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Nocardiopsaceae;Nocardiopsis Nocardiopsis gilva YIM 90087 extrachromosomal linear Cluster_103 Actinobacteria_gi_484024991 hallmark;refseq 101;24;11;66 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Nocardiopsaceae;Nocardiopsis Nocardiopsis gilva YIM 90087 extrachromosomal linear Cluster_590 Actinobacteria_gi_484025394 hallmark;refseq 53;19;;34 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Micromonosporaceae;Salinispora Salinispora arenicola CNP193 extrachromosomal linear Cluster_214 Actinobacteria_gi_484031757 hallmark;vdb 12;3;2;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Micromonosporaceae;Salinispora Salinispora arenicola CNY256 extrachromosomal linear Cluster_286 Actinobacteria_gi_484032675-42320-77942 hallmark;refseq 52;16;5;31 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Micromonosporaceae;Salinispora Salinispora arenicola CNY260 prophage linear Cluster_214 Actinobacteria_gi_484033837 hallmark;refseq 38;11;2;25 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Micromonosporaceae;Salinispora Salinispora arenicola CNY280 extrachromosomal linear Cluster_214 Actinobacteria_gi_484033862 hallmark;refseq 39;13;1;25 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Micromonosporaceae;Salinispora Salinispora arenicola CNY280 extrachromosomal linear Cluster_214 Actinobacteria_gi_484035204 hallmark;refseq 33;9;2;22 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Micromonosporaceae;Salinispora Salinispora pacifica CNQ768 extrachromosomal linear Cluster_214 Actinobacteria_gi_484036214 hallmark;refseq 20;9;1;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Micromonosporaceae;Salinispora Salinispora pacifica CNT584 extrachromosomal linear Cluster_214 Actinobacteria_gi_484036993 hallmark 31;3;5;23 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Micromonosporaceae;Salinispora Salinispora pacifica CNT609 extrachromosomal linear unclustered Actinobacteria_gi_484040487 hallmark;refseq 45;12;;33 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Micromonosporaceae;Salinispora Salinispora pacifica CNY330 extrachromosomal linear Cluster_214 Actinobacteria_gi_484042886-11-24134 hallmark;refseq 29;10;2;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Micromonosporaceae;Salinispora Salinispora tropica CNR699 prophage linear Cluster_155 Actinobacteria_gi_484042948 hallmark 13;5;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Micromonosporaceae;Salinispora Salinispora tropica CNR699 extrachromosomal linear Cluster_132 Actinobacteria_gi_484042993 hallmark 15;2;1;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Micromonosporaceae;Salinispora Salinispora tropica CNR699 extrachromosomal linear unclustered Actinobacteria_gi_484048409 hallmark;refseq 66;18;5;43 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Corynebacteriaceae;Corynebacterium Corynebacterium diphtheriae bv. mitis str. NC03529 extrachromosomal linear Cluster_446 Actinobacteria_gi_484048417 hallmark;refseq 40;15;4;21 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Corynebacteriaceae;Corynebacterium Corynebacterium diphtheriae bv. mitis str. NC03529 extrachromosomal linear Cluster_383 Actinobacteria_gi_484063094-9427-43290 hallmark 35;5;13;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Actinobacteria;Actinobacteria;Coriobacteriales;Coriobacteriaceae;unknown Coriobacteriaceae bacterium GD5 prophage linear Cluster_576 Actinobacteria_gi_484064923-31-33894 hallmark 35;5;13;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Actinobacteria;Actinobacteria;Coriobacteriales;Coriobacteriaceae;Collinsella Collinsella sp. GD3 prophage linear Cluster_576 Actinobacteria_gi_484080795-158098-231781 hallmark;refseq 99;55;4;40 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Mycobacteriaceae;Mycobacterium Mycobacterium abscessus M115 prophage linear Cluster_132 Actinobacteria_gi_484081368 hallmark;refseq 69;32;;37 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Mycobacteriaceae;Mycobacterium Mycobacterium abscessus subsp. bolletii M18 extrachromosomal linear Cluster_212 Actinobacteria_gi_484126993-2307-14717 hallmark 21;5;;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Corynebacteriaceae;unknown Corynebacterium-like bacterium B27 prophage linear unclustered Actinobacteria_gi_484176109 hallmark;vdb 15;1;4;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Micrococcaceae;Kocuria Kocuria atrinae C3-8 extrachromosomal linear Cluster_19 Actinobacteria_gi_484231591 hallmark;refseq 80;27;15;38 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;L5likevirus;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Corynebacteriaceae;Corynebacterium Corynebacterium mastitidis DSM 44356 extrachromosomal linear Cluster_446 Actinobacteria_gi_484335802-74-42145 hallmark;refseq 50;20;8;22 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Mycobacteriaceae;Mycobacterium Mycobacterium abscessus M156 prophage linear Cluster_362 Actinobacteria_gi_484336158 refseq 21;11;1;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Mycobacteriaceae;Mycobacterium Mycobacterium abscessus M148 extrachromosomal linear Cluster_362 Actinobacteria_gi_484336207 refseq 22;13;;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Mycobacteriaceae;Mycobacterium Mycobacterium abscessus M148 extrachromosomal linear Cluster_132 Actinobacteria_gi_484336292 hallmark;refseq 36;17;2;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Mycobacteriaceae;Mycobacterium Mycobacterium abscessus M148 extrachromosomal linear Cluster_155 Actinobacteria_gi_484336387 hallmark;refseq 36;15;;21 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Mycobacteriaceae;Mycobacterium Mycobacterium abscessus M148 extrachromosomal linear Cluster_362 Actinobacteria_gi_484867420 hallmark 34;11;2;21 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Streptomycetaceae;Streptomyces Streptomyces sp. TOR3209 extrachromosomal linear Cluster_240 Actinobacteria_gi_484867422 refseq 35;10;;25 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Streptomycetaceae;Streptomyces Streptomyces sp. TOR3209 extrachromosomal linear Cluster_457 Actinobacteria_gi_485069185 hallmark;refseq 59;20;12;27 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Streptomycetaceae;Streptomyces Streptomyces sp. FxanaD5 extrachromosomal linear Cluster_263 Actinobacteria_gi_485070998 hallmark;refseq 32;13;2;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Streptomycetaceae;Streptomyces Streptomyces sulphureus DSM 40104 extrachromosomal linear Cluster_132 Actinobacteria_gi_485467442 hallmark;refseq 13;11;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Mycobacteriaceae;Mycobacterium Mycobacterium avium subsp. avium Env 77 extrachromosomal linear Cluster_567 Actinobacteria_gi_485467562 hallmark;refseq 22;14;;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Mycobacteriaceae;Mycobacterium Mycobacterium avium subsp. avium Env 77 extrachromosomal linear Cluster_567 Actinobacteria_gi_485467603 refseq 17;9;1;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Mycobacteriaceae;Mycobacterium Mycobacterium avium subsp. avium Env 77 extrachromosomal linear Cluster_78 Actinobacteria_gi_485663315 hallmark;refseq 35;16;2;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Phic3unalikevirus;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Streptomycetaceae;Streptomyces Streptomyces sp. Wigar10 extrachromosomal linear Cluster_286 Actinobacteria_gi_489177658 hallmark 52;9;3;40 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Punalikevirus;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Pseudonocardiaceae;Amycolatopsis Amycolatopsis vancoresmycina DSM 44592 extrachromosomal linear Cluster_467 Actinobacteria_gi_493997464 hallmark 23;5;5;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Nocardiaceae;Rhodococcus Rhodococcus sp. EsD8 extrachromosomal linear unclustered Actinobacteria_gi_494002731 hallmark;refseq 67;23;4;40 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Nocardiaceae;Rhodococcus Rhodococcus sp. EsD8 extrachromosomal linear Cluster_354 Actinobacteria_gi_498789487 refseq 18;9;2;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;L5likevirus;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Nocardiaceae;Rhodococcus Rhodococcus rhodnii LMG 5362 extrachromosomal linear Cluster_354 Actinobacteria_gi_498789783 hallmark;refseq 42;18;1;23 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;L5likevirus;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Nocardiaceae;Rhodococcus Rhodococcus rhodnii LMG 5362 extrachromosomal linear Cluster_354 Actinobacteria_gi_498790102 hallmark;refseq 45;26;;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Nocardiaceae;Rhodococcus Rhodococcus rhodnii LMG 5362 extrachromosomal linear Cluster_235 Actinobacteria_gi_498792577 hallmark;refseq 22;14;;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Nocardiaceae;Rhodococcus Rhodococcus rhodnii LMG 5362 extrachromosomal linear Cluster_235 Actinobacteria_gi_506496126-11321-56319 hallmark;refseq 78;21;3;54 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Microbacteriaceae;Agrococcus Agrococcus pavilionensis RW1 prophage linear Cluster_382 Actinobacteria_gi_512703811-1170088-1228984 hallmark;refseq 70;25;16;29 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Actinobacteria;Actinobacteria;Coriobacteriales;Coriobacteriaceae;Atopobium Atopobium sp. oral taxon 199 str. F0494 prophage linear Cluster_57 Actinobacteria_gi_514922871 hallmark;refseq 89;33;11;45 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Phic3unalikevirus;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Streptomycetaceae;Streptomyces Streptomyces aurantiacus JA 4570 extrachromosomal linear Cluster_374 Actinobacteria_gi_515169684 hallmark 20;7;;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Actinobacteria;Actinobacteria;Bifidobacteriales;Bifidobacteriaceae;Gardnerella Gardnerella vaginalis JCP8151B extrachromosomal linear Cluster_508 Actinobacteria_gi_515203431 hallmark;refseq 16;7;;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Actinobacteria;Actinobacteria;Bifidobacteriales;Bifidobacteriaceae;Gardnerella Gardnerella vaginalis JCP8151A extrachromosomal linear Cluster_508 Actinobacteria_gi_515222949 hallmark;refseq 51;20;11;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Actinobacteria;Actinobacteria;Bifidobacteriales;Bifidobacteriaceae;Gardnerella Gardnerella vaginalis JCP8108 extrachromosomal linear Cluster_20 Actinobacteria_gi_523592800 hallmark;refseq 46;18;8;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Actinobacteria;Actinobacteria;Bifidobacteriales;Bifidobacteriaceae;Gardnerella Gardnerella vaginalis JCP8017B extrachromosomal linear Cluster_20 Actinobacteria_gi_523593728 hallmark;refseq 34;14;4;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Actinobacteria;Actinobacteria;Bifidobacteriales;Bifidobacteriaceae;Gardnerella Gardnerella vaginalis JCP8017A extrachromosomal linear Cluster_20 Actinobacteria_gi_523594143 hallmark;refseq 54;20;16;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Actinobacteria;Actinobacteria;Bifidobacteriales;Bifidobacteriaceae;Gardnerella Gardnerella vaginalis JCP7719 extrachromosomal linear Cluster_20 Actinobacteria_gi_523607311 hallmark;refseq 64;20;17;27 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Actinobacteria;Actinobacteria;Bifidobacteriales;Bifidobacteriaceae;Gardnerella Gardnerella vaginalis JCP7276 extrachromosomal linear Cluster_20 Actinobacteria_gi_544674883-1159-10410 hallmark;refseq 14;6;1;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Propionibacteriaceae;Propionibacterium Propionibacterium avidum TM16 prophage linear Cluster_207 Actinobacteria_gi_544774031 hallmark;refseq 59;21;;38 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Microbacteriaceae;Microbacterium Microbacterium maritypicum MF109 extrachromosomal linear Cluster_382 Actinobacteria_gi_544775493 hallmark 23;8;;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Microbacteriaceae;Microbacterium Microbacterium maritypicum MF109 extrachromosomal circular Cluster_2 Actinobacteria_gi_544933272 refseq 12;6;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Pseudonocardiaceae;Saccharopolyspora Saccharopolyspora erythraea D extrachromosomal linear Cluster_19 Actinobacteria_gi_545333501 hallmark;refseq 37;14;1;22 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Actinomycetaceae;Actinomyces Actinomyces johnsonii F0510 extrachromosomal linear Cluster_374 Actinobacteria_gi_545352115-20076-47096 hallmark;refseq;vdb 34;11;2;21 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Actinomycetaceae;Actinomyces Actinomyces sp. oral taxon 877 str. F0543 prophage linear Cluster_207 Actinobacteria_gi_545408482 hallmark 33;9;5;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;L5likevirus;unknown Bacteria;Actinobacteria;Actinobacteria;Bifidobacteriales;Bifidobacteriaceae;Bifidobacterium Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456 extrachromosomal linear Cluster_207 Actinobacteria_gi_545410648 hallmark;vdb 31;8;3;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Actinobacteria;Actinobacteria;Bifidobacteriales;Bifidobacteriaceae;Bifidobacterium Bifidobacterium breve JCP7499 extrachromosomal linear Cluster_207 Actinobacteria_gi_545597125-23523-54898 hallmark;refseq;vdb 54;16;3;35 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Actinobacteria;Actinobacteria;Coriobacteriales;Coriobacteriaceae;Olsenella Olsenella profusa F0195 prophage linear Cluster_197 Actinobacteria_gi_545597997 hallmark;refseq 46;14;5;27 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Actinobacteria;Actinobacteria;Coriobacteriales;Coriobacteriaceae;Olsenella Olsenella profusa F0195 extrachromosomal linear Cluster_382 Actinobacteria_gi_545611432 hallmark 55;14;5;36 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Actinobacteria;Actinobacteria;Coriobacteriales;Coriobacteriaceae;Atopobium Atopobium sp. BV3Ac4 extrachromosomal linear Cluster_76 Actinobacteria_gi_546862272 hallmark 13;5;1;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;Phi29likevirus;unknown Bacteria;Actinobacteria;Actinobacteria;Coriobacteriales;Coriobacteriaceae;Eggerthella Eggerthella sp. CAG:1427 extrachromosomal linear Cluster_182 Actinobacteria_gi_547761680-18542-28527 noncaudo 11;4;1;6 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Actinobacteria;Actinobacteria;Bifidobacteriales;Bifidobacteriaceae;Bifidobacterium Bifidobacterium bifidum CAG:234 prophage linear unclustered Actinobacteria_gi_548079438 refseq;vdb 39;12;3;24 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Actinobacteria;Actinobacteria;Coriobacteriales;Coriobacteriaceae;Cryptobacterium Cryptobacterium sp. CAG:338 extrachromosomal linear Cluster_94 Actinobacteria_gi_548163931 hallmark;refseq 30;12;4;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Actinobacteria;Actinobacteria;Coriobacteriales;Coriobacteriaceae;Collinsella Collinsella sp. CAG:289 extrachromosomal linear Cluster_426 Actinobacteria_gi_548569677 hallmark 19;6;;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Actinobacteria;Actinobacteria;Bifidobacteriales;Bifidobacteriaceae;Bifidobacterium Bifidobacterium longum subsp. longum CECT 7347 extrachromosomal linear Cluster_207 Actinobacteria_gi_550255506 hallmark;refseq 59;57;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Nocardiaceae;Rhodococcus Rhodococcus equi NBRC 101255 = C 7 extrachromosomal linear Cluster_598 Actinobacteria_gi_551236822 hallmark 40;12;3;25 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Actinobacteria;Actinobacteria;Bifidobacteriales;Bifidobacteriaceae;Alloscardovia Alloscardovia omnicolens DSM 21503 extrachromosomal circular Cluster_421 Actinobacteria_gi_551239924 hallmark;refseq 38;10;2;26 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Actinobacteria;Actinobacteria;Bifidobacteriales;Bifidobacteriaceae;Bifidobacterium Bifidobacterium magnum DSM 20222 extrachromosomal linear Cluster_597 Actinobacteria_gi_551245205 hallmark 22;6;2;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Actinomycetaceae;Varibaculum Varibaculum cambriense DSM 15806 extrachromosomal circular Cluster_394 Actinobacteria_gi_564018020 hallmark 41;7;5;29 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Frankiaceae;Frankia Frankia sp. CcI6 extrachromosomal linear Cluster_42 Actinobacteria_gi_564945046 refseq 32;14;5;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Mycobacteriaceae;Mycobacterium Mycobacterium avium subsp. hominissuis 10-5606 extrachromosomal linear Cluster_391 Actinobacteria_gi_564971081 hallmark;refseq 16;9;;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Mycobacteriaceae;Mycobacterium Mycobacterium avium subsp. hominissuis 10-5606 extrachromosomal linear Cluster_209 Actinobacteria_gi_564971092 hallmark 18;4;2;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Mycobacteriaceae;Mycobacterium Mycobacterium avium subsp. hominissuis 10-5606 extrachromosomal linear Cluster_19 Actinobacteria_gi_568063277 hallmark 43;10;5;28 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Streptomycetaceae;Streptomyces Streptomyces sp. F2 extrachromosomal linear Cluster_610 Alphaproteobacteria_gi_146276058-2120630-2161130 hallmark;refseq 57;32;4;21 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;Rhodobacter Rhodobacter sphaeroides ATCC 17025 prophage linear Cluster_101 Alphaproteobacteria_gi_163867306-1933082-1971336 hallmark;refseq 47;28;5;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Bartonellaceae;Bartonella Bartonella tribocorum CIP 105476 prophage linear Cluster_101 Alphaproteobacteria_gi_170744977 hallmark 29;4;3;22 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Methylobacteriaceae;Methylobacterium Methylobacterium radiotolerans JCM 2831 extrachromosomal linear Cluster_1 Alphaproteobacteria_gi_188579259 hallmark;vdb 27;7;10;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Methylobacteriaceae;Methylobacterium Methylobacterium populi BJ001 extrachromosomal linear Cluster_42 Alphaproteobacteria_gi_224580656-0-35096 hallmark;refseq;vdb 24;10;10;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Alphaproteobacteria;Rickettsiales;Anaplasmataceae;Wolbachia Wolbachia endosymbiont of Culex quinquefasciatus JHB prophage linear Cluster_181 Alphaproteobacteria_gi_224580657 hallmark 86;16;33;37 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rickettsiales;Anaplasmataceae;Wolbachia Wolbachia endosymbiont of Culex quinquefasciatus JHB extrachromosomal linear Cluster_181 Alphaproteobacteria_gi_254505302 hallmark;refseq 53;20;4;29 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;Labrenzia Labrenzia alexandrii DFL-11 extrachromosomal linear Cluster_58 Alphaproteobacteria_gi_260576679 hallmark 60;14;18;28 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;Rhodobacter Rhodobacter sp. SW2 extrachromosomal linear Cluster_136 Alphaproteobacteria_gi_260577034 hallmark 47;12;11;24 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;Rhodobacter Rhodobacter sp. SW2 extrachromosomal linear Cluster_136 Alphaproteobacteria_gi_260577346 hallmark;vdb 20;5;5;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;Rhodobacter Rhodobacter sp. SW2 extrachromosomal linear Cluster_10 Alphaproteobacteria_gi_304393905 hallmark;refseq 91;27;8;56 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;Ahrensia Ahrensia sp. R2A130 extrachromosomal linear Cluster_3 Alphaproteobacteria_gi_306839375 hallmark;refseq 46;17;11;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;T4likevirus;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Brucellaceae;Brucella Brucella sp. NF 2653 extrachromosomal linear Cluster_131 Alphaproteobacteria_gi_306840416 hallmark 48;11;4;33 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Brucellaceae;Brucella Brucella sp. BO2 extrachromosomal linear Cluster_4 Alphaproteobacteria_gi_306840426 hallmark;vdb 16;5;1;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Brucellaceae;Brucella Brucella sp. BO2 extrachromosomal linear Cluster_4 Alphaproteobacteria_gi_306843026 hallmark 22;8;5;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Brucellaceae;Brucella Brucella sp. BO2 extrachromosomal linear Cluster_101 Alphaproteobacteria_gi_306846319 hallmark;refseq 17;15;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Brucellaceae;Brucella Brucella inopinata BO1 extrachromosomal linear Cluster_42 Alphaproteobacteria_gi_307943872 hallmark;refseq 27;12;3;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;Roseibium Roseibium sp. TrichSKD4 extrachromosomal linear Cluster_0 Alphaproteobacteria_gi_307944653 hallmark;refseq 67;21;10;36 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;Roseibium Roseibium sp. TrichSKD4 extrachromosomal linear Cluster_0 Alphaproteobacteria_gi_315121750-175543-216747 hallmark;refseq 48;33;2;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Rhizobiaceae;Candidatus Liberibacter Candidatus Liberibacter solanacearum CLso-ZC1 prophage linear Cluster_260 Alphaproteobacteria_gi_329113603 refseq 29;11;10;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhodospirillales;Acetobacteraceae;Acetobacter Acetobacter pomorum DM001 extrachromosomal linear Cluster_101 Alphaproteobacteria_gi_329115469 hallmark 33;8;6;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhodospirillales;Acetobacteraceae;Acetobacter Acetobacter pomorum DM001 extrachromosomal linear Cluster_376 Alphaproteobacteria_gi_330992627 hallmark 17;3;4;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhodospirillales;Acetobacteraceae;Gluconacetobacter Gluconacetobacter sp. SXCC-1 extrachromosomal linear Cluster_395 Alphaproteobacteria_gi_335035758 hallmark 20;7;;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unclassified;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Rhizobiaceae;Agrobacterium Agrobacterium sp. ATCC 31749 extrachromosomal linear Cluster_563 Alphaproteobacteria_gi_339021592 hallmark;refseq 24;15;6;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhodospirillales;Acetobacteraceae;Acetobacter Acetobacter tropicalis NBRC 101654 extrachromosomal linear Cluster_54 Alphaproteobacteria_gi_339021902 hallmark 19;6;;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhodospirillales;Acetobacteraceae;Acetobacter Acetobacter tropicalis NBRC 101654 extrachromosomal linear unclustered Alphaproteobacteria_gi_339021999 refseq 18;11;;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhodospirillales;Acetobacteraceae;Acetobacter Acetobacter tropicalis NBRC 101654 extrachromosomal linear Cluster_54 Alphaproteobacteria_gi_339022256 refseq;vdb 13;5;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhodospirillales;Acetobacteraceae;Acetobacter Acetobacter tropicalis NBRC 101654 extrachromosomal circular Cluster_4 Alphaproteobacteria_gi_339022435 hallmark 15;6;1;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhodospirillales;Acetobacteraceae;Acetobacter Acetobacter tropicalis NBRC 101654 extrachromosomal linear Cluster_3 Alphaproteobacteria_gi_339959485 hallmark;refseq 18;8;2;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;Paracoccus Paracoccus sp. TRP extrachromosomal linear Cluster_218 Alphaproteobacteria_gi_348166658-37040-88255 hallmark;refseq 76;29;4;43 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhodospirillales;Acetobacteraceae;Komagataeibacter Gluconacetobacter europaeus LMG 18494 prophage linear Cluster_54 Alphaproteobacteria_gi_348166710 hallmark 18;4;3;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhodospirillales;Acetobacteraceae;Komagataeibacter Gluconacetobacter europaeus LMG 18494 extrachromosomal circular Cluster_6 Alphaproteobacteria_gi_348166900 hallmark 49;15;11;23 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhodospirillales;Acetobacteraceae;Komagataeibacter Gluconacetobacter oboediens 174Bp2 extrachromosomal linear Cluster_28 Alphaproteobacteria_gi_353025795 hallmark 10;4;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rickettsiales;Anaplasmataceae;Wolbachia Wolbachia endosymbiont wVitB of Nasonia vitripennis extrachromosomal linear Cluster_181 Alphaproteobacteria_gi_354594202 hallmark;refseq;vdb 66;15;22;29 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhodospirillales;Acetobacteraceae;Commensalibacter Commensalibacter intestini A911 extrachromosomal linear Cluster_3 Alphaproteobacteria_gi_354595417 hallmark 46;9;9;28 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhodospirillales;Acetobacteraceae;Commensalibacter Commensalibacter intestini A911 extrachromosomal linear Cluster_82 Alphaproteobacteria_gi_357032483 hallmark 44;14;10;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhodospirillales;Acetobacteraceae;Gluconobacter Gluconobacter morbifer G707 extrachromosomal linear Cluster_3 Alphaproteobacteria_gi_359400421 hallmark;refseq 41;21;4;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Sphingomonadales;Sphingomonadaceae;Novosphingobium Novosphingobium pentaromativorans US6-1 extrachromosomal linear Cluster_0 Alphaproteobacteria_gi_359789361 refseq 39;13;4;22 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Phyllobacteriaceae;Mesorhizobium Mesorhizobium alhagi CCNWXJ12-2 extrachromosomal linear Cluster_205 Alphaproteobacteria_gi_359790220 hallmark;refseq 58;22;7;29 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Phyllobacteriaceae;Mesorhizobium Mesorhizobium alhagi CCNWXJ12-2 extrachromosomal linear Cluster_517 Alphaproteobacteria_gi_359790324 hallmark;refseq 34;13;4;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Phyllobacteriaceae;Mesorhizobium Mesorhizobium alhagi CCNWXJ12-2 extrachromosomal linear Cluster_218 Alphaproteobacteria_gi_365882891 hallmark;refseq 106;27;27;52 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Bradyrhizobiaceae;Bradyrhizobium Bradyrhizobium sp. ORS 375 extrachromosomal linear Cluster_0 Alphaproteobacteria_gi_365886390 hallmark 17;3;1;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Bradyrhizobiaceae;Bradyrhizobium Bradyrhizobium sp. STM 3809 extrachromosomal linear Cluster_19 Alphaproteobacteria_gi_365896721 refseq 13;9;;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Bradyrhizobiaceae;Bradyrhizobium Bradyrhizobium sp. STM 3843 extrachromosomal linear Cluster_54 Alphaproteobacteria_gi_372137200 hallmark 13;5;;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;Oceanicola Oceanicola sp. S124 extrachromosomal linear Cluster_7 Alphaproteobacteria_gi_372137318-398-37125 hallmark;refseq 48;28;4;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;Oceanicola Oceanicola sp. S124 prophage linear Cluster_3 Alphaproteobacteria_gi_373449894 hallmark;vdb 13;2;5;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Alphaproteobacteria;Rickettsiales;Anaplasmataceae;Wolbachia Wolbachia pipientis wAlbB extrachromosomal linear Cluster_181 Alphaproteobacteria_gi_374088007 hallmark 41;9;7;25 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhodospirillales;Acetobacteraceae;unknown Acetobacteraceae bacterium AT-5844 extrachromosomal linear Cluster_376 Alphaproteobacteria_gi_381168833 hallmark;vdb 18;5;3;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhodospirillales;Rhodospirillaceae;Phaeospirillum Phaeospirillum molischianum DSM 120 extrachromosomal linear Cluster_571 Alphaproteobacteria_gi_381414274 hallmark 29;8;3;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Sphingomonadales;Sphingomonadaceae;Sphingomonas Sphingomonas elodea ATCC 31461 extrachromosomal linear Cluster_0 Alphaproteobacteria_gi_381414287 hallmark;refseq 29;18;2;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Sphingomonadales;Sphingomonadaceae;Sphingomonas Sphingomonas elodea ATCC 31461 extrachromosomal linear Cluster_0 Alphaproteobacteria_gi_384917524 hallmark;vdb 34;6;15;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Yualikevirus;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;Citreicella Citreicella sp. 357 extrachromosomal linear Cluster_136 Alphaproteobacteria_gi_390168193 hallmark 21;3;1;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Sphingomonadales;Sphingomonadaceae;Sphingobium Sphingobium indicum B90A extrachromosomal linear unclustered Alphaproteobacteria_gi_393764654 hallmark;refseq 67;24;1;42 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Methylobacteriaceae;Methylobacterium Methylobacterium sp. GXF4 extrachromosomal linear Cluster_587 Alphaproteobacteria_gi_397770497-26002-77127 hallmark;refseq;vdb 62;25;14;23 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Bartonellaceae;Bartonella Bartonella sp. DB5-6 prophage linear Cluster_203 Alphaproteobacteria_gi_397770507 hallmark;refseq 17;10;3;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Bartonellaceae;Bartonella Bartonella sp. DB5-6 extrachromosomal linear Cluster_0 Alphaproteobacteria_gi_397770508 hallmark 24;4;2;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Bartonellaceae;Bartonella Bartonella sp. DB5-6 extrachromosomal linear Cluster_101 Alphaproteobacteria_gi_397770509 hallmark;vdb 19;2;7;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Bartonellaceae;Bartonella Bartonella sp. DB5-6 extrachromosomal linear Cluster_203 Alphaproteobacteria_gi_397770539 hallmark 37;13;7;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Bartonellaceae;Bartonella Bartonella washoensis 085-0475 extrachromosomal linear Cluster_0 Alphaproteobacteria_gi_398379397-12555-50951 hallmark;refseq 50;14;1;35 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unclassified;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Rhizobiaceae;Rhizobium Rhizobium sp. AP16 prophage linear Cluster_454 Alphaproteobacteria_gi_398386603 hallmark 30;4;10;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Sphingomonadales;Sphingomonadaceae;Sphingobium Sphingobium sp. AP49 extrachromosomal linear Cluster_531 Alphaproteobacteria_gi_398820691 hallmark 43;10;1;32 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Bradyrhizobiaceae;Bradyrhizobium Bradyrhizobium sp. YR681 extrachromosomal linear Cluster_5 Alphaproteobacteria_gi_398823709 hallmark;refseq 117;28;24;65 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Bradyrhizobiaceae;Bradyrhizobium Bradyrhizobium sp. YR681 extrachromosomal linear Cluster_517 Alphaproteobacteria_gi_399063385 hallmark;refseq 18;7;2;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Sphingomonadales;Sphingomonadaceae;Novosphingobium Novosphingobium sp. AP12 extrachromosomal linear Cluster_342 Alphaproteobacteria_gi_402821110-8504-33206 hallmark 43;15;;28 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Sphingomonadales;Sphingomonadaceae;Sphingomonas Sphingomonas sp. LH128 prophage linear Cluster_432 Alphaproteobacteria_gi_402821324 hallmark;refseq 43;15;2;26 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Sphingomonadales;Sphingomonadaceae;Sphingomonas Sphingomonas sp. LH128 extrachromosomal linear Cluster_7 Alphaproteobacteria_gi_402850157 hallmark 51;13;6;32 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;Rhodovulum Rhodovulum sp. PH10 extrachromosomal linear Cluster_570 Alphaproteobacteria_gi_407780245 hallmark 76;16;14;46 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Phyllobacteriaceae;Nitratireductor Nitratireductor pacificus pht-3B extrachromosomal linear Cluster_201 Alphaproteobacteria_gi_407780934-153693-193855 hallmark;refseq;vdb 59;23;8;28 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhodospirillales;Rhodospirillaceae;Oceanibaculum Oceanibaculum indicum P24 prophage linear Cluster_3 Alphaproteobacteria_gi_407783993 hallmark;refseq 41;19;4;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhodospirillales;Rhodospirillaceae;Oceanibaculum Oceanibaculum indicum P24 extrachromosomal linear Cluster_20 Alphaproteobacteria_gi_407800646 hallmark 17;4;4;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;Oceaniovalibus Oceaniovalibus guishaninsula JLT2003 extrachromosomal linear Cluster_136 Alphaproteobacteria_gi_407977313 hallmark;refseq 21;12;1;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Phyllobacteriaceae;Nitratireductor Nitratireductor indicus C115 extrachromosomal linear Cluster_4 Alphaproteobacteria_gi_407977335 hallmark;refseq 20;10;2;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Phyllobacteriaceae;Nitratireductor Nitratireductor indicus C115 extrachromosomal linear Cluster_218 Alphaproteobacteria_gi_410651360 hallmark 47;12;5;30 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhodospirillales;Acetobacteraceae;Gluconobacter Gluconobacter frateurii NBRC 101659 extrachromosomal linear Cluster_376 Alphaproteobacteria_gi_418057449 hallmark;refseq 114;28;17;69 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Methylobacteriaceae;Methylobacterium Methylobacterium extorquens DSM 13060 extrachromosomal linear Cluster_177 Alphaproteobacteria_gi_418061159 hallmark 21;6;7;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Methylobacteriaceae;Methylobacterium Methylobacterium extorquens DSM 13060 extrachromosomal linear Cluster_19 Alphaproteobacteria_gi_418403387-0-30091 hallmark;refseq 36;16;2;18 Viruses;dsDNA viruses no RNA stage;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Rhizobiaceae;Sinorhizobium Sinorhizobium meliloti CCNWSX0020 prophage linear Cluster_352 Alphaproteobacteria_gi_418938031-6048-43633 hallmark 58;18;10;30 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Rhizobiaceae;Rhizobium Rhizobium sp. PDO1-076 prophage linear Cluster_3 Alphaproteobacteria_gi_421760367 hallmark 41;7;10;24 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Bartonellaceae;Bartonella Bartonella bacilliformis INS extrachromosomal linear Cluster_203 Alphaproteobacteria_gi_421853582 hallmark 30;9;10;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhodospirillales;Acetobacteraceae;Acetobacter Acetobacter pasteurianus subsp. pasteurianus LMG 1262 = NBRC 106471 extrachromosomal linear Cluster_1 Alphaproteobacteria_gi_444308382 hallmark 55;14;5;36 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Brucellaceae;Ochrobactrum Ochrobactrum intermedium M86 extrachromosomal linear Cluster_507 Alphaproteobacteria_gi_444310867 hallmark 35;8;1;26 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Brucellaceae;Ochrobactrum Ochrobactrum intermedium M86 extrachromosomal linear Cluster_507 Alphaproteobacteria_gi_444312596 hallmark 71;18;6;47 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Tunalikevirus;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Brucellaceae;Ochrobactrum Ochrobactrum intermedium M86 extrachromosomal linear Cluster_177 Alphaproteobacteria_gi_451941309-854790-896321 hallmark;refseq 48;28;7;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Bartonellaceae;Bartonella Bartonella vinsonii subsp. berkhoffii str. Winnie prophage linear Cluster_101 Alphaproteobacteria_gi_458907243 hallmark 75;17;26;32 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Alphaproteobacteria;Rhodospirillales;Rhodospirillaceae;Magnetospirillum Magnetospirillum sp. SO-1 extrachromosomal linear Cluster_168 Alphaproteobacteria_gi_458920821 hallmark;vdb 14;2;4;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhodospirillales;Rhodospirillaceae;Magnetospirillum Magnetospirillum sp. SO-1 extrachromosomal linear Cluster_136 Alphaproteobacteria_gi_458921628 hallmark 21;3;5;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhodospirillales;Rhodospirillaceae;Magnetospirillum Magnetospirillum sp. SO-1 extrachromosomal linear Cluster_571 Alphaproteobacteria_gi_459021726-69921-90619 hallmark;vdb 23;7;6;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhodospirillales;Acetobacteraceae;Gluconobacter Gluconobacter thailandicus NBRC 3255 prophage linear Cluster_3 Alphaproteobacteria_gi_459785094 hallmark;refseq 48;24;5;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Brucellaceae;Ochrobactrum Ochrobactrum sp. CDB2 extrachromosomal linear Cluster_218 Alphaproteobacteria_gi_476522928 hallmark;refseq 11;9;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Rhizobiaceae;Candidatus Liberibacter Candidatus Liberibacter americanus PW_SP extrachromosomal linear Cluster_260 Alphaproteobacteria_gi_476522950 hallmark;refseq 7;7;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Rhizobiaceae;Candidatus Liberibacter Candidatus Liberibacter americanus PW_SP extrachromosomal linear Cluster_260 Alphaproteobacteria_gi_476522964 refseq 7;5;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Rhizobiaceae;Candidatus Liberibacter Candidatus Liberibacter americanus PW_SP extrachromosomal linear Cluster_260 Alphaproteobacteria_gi_482743784 hallmark 42;7;3;32 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Sphingomonadales;Sphingomonadaceae;Sphingomonas Sphingomonas wittichii DP58 extrachromosomal linear Cluster_379 Alphaproteobacteria_gi_482759443 hallmark 57;14;;43 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Sphingomonadales;Sphingomonadaceae;Sphingomonas Sphingomonas wittichii DP58 extrachromosomal linear Cluster_547 Alphaproteobacteria_gi_482992239 hallmark;vdb 26;1;7;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Methylobacteriaceae;Methylobacterium Methylobacterium sp. WSM2598 extrachromosomal circular Cluster_1 Alphaproteobacteria_gi_483319666 hallmark 14;1;3;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Tunalikevirus;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Bradyrhizobiaceae;Bradyrhizobium Bradyrhizobium japonicum WSM2793 extrachromosomal linear Cluster_510 Alphaproteobacteria_gi_483807038 hallmark 69;14;14;41 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhodospirillales;Acetobacteraceae;Komagataeibacter Gluconacetobacter europaeus LMG 18890 extrachromosomal circular Cluster_3 Alphaproteobacteria_gi_483831584 hallmark 15;3;1;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Punalikevirus;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhodospirillales;Acetobacteraceae;Acetobacter Acetobacter pasteurianus 3P3 extrachromosomal linear Cluster_395 Alphaproteobacteria_gi_483832087 hallmark 12;5;;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhodospirillales;Acetobacteraceae;Acetobacter Acetobacter pasteurianus 3P3 extrachromosomal linear Cluster_376 Alphaproteobacteria_gi_483839584 hallmark 46;5;8;33 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhodospirillales;Acetobacteraceae;Komagataeibacter Gluconacetobacter europaeus 5P3 extrachromosomal linear Cluster_395 Alphaproteobacteria_gi_483839739 hallmark 56;7;5;44 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Alphaproteobacteria;Rhodospirillales;Acetobacteraceae;Komagataeibacter Gluconacetobacter europaeus 5P3 extrachromosomal linear Cluster_395 Alphaproteobacteria_gi_483995603 hallmark 39;9;8;22 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Methylobacteriaceae;Meganema Meganema perideroedes DSM 15528 extrachromosomal circular Cluster_126 Alphaproteobacteria_gi_483997032 hallmark 61;15;7;39 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Alphaproteobacteria;unknown;unknown;unknown alpha proteobacterium LLX12A extrachromosomal linear Cluster_4 Alphaproteobacteria_gi_483997090 hallmark 41;7;16;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Alphaproteobacteria;unknown;unknown;unknown alpha proteobacterium LLX12A extrachromosomal linear Cluster_531 Alphaproteobacteria_gi_483997275 hallmark;refseq 20;7;4;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Alphaproteobacteria;unknown;unknown;unknown alpha proteobacterium LLX12A extrachromosomal linear Cluster_3 Alphaproteobacteria_gi_484006205 refseq 5;4;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Alphaproteobacteria;Rickettsiales;Anaplasmataceae;Wolbachia Wolbachia endosymbiont of Diaphorina citri extrachromosomal linear Cluster_181 Alphaproteobacteria_gi_484041859 hallmark;refseq 30;17;6;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Bartonellaceae;Bartonella Bartonella rattaustraliani AUST/NH4 extrachromosomal linear Cluster_101 Alphaproteobacteria_gi_484042143 hallmark 23;8;3;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Bartonellaceae;Bartonella Bartonella rattaustraliani AUST/NH4 extrachromosomal linear Cluster_136 Alphaproteobacteria_gi_484042176 hallmark;refseq 26;14;6;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Bartonellaceae;Bartonella Bartonella rattaustraliani AUST/NH4 extrachromosomal linear Cluster_0 Alphaproteobacteria_gi_484042631 hallmark 44;12;12;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Bartonellaceae;Bartonella Bartonella rattimassiliensis 15908 extrachromosomal linear Cluster_203 Alphaproteobacteria_gi_484042655 hallmark;refseq 35;20;3;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Bartonellaceae;Bartonella Bartonella rattimassiliensis 15908 extrachromosomal linear Cluster_101 Alphaproteobacteria_gi_484042709 hallmark 22;9;6;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Bartonellaceae;Bartonella Bartonella rattimassiliensis 15908 extrachromosomal linear Cluster_203 Alphaproteobacteria_gi_484075156-0-39986 hallmark;refseq 60;28;4;28 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhodospirillales;Acetobacteraceae;Saccharibacter Saccharibacter floricola DSM 15669 prophage linear Cluster_54 Alphaproteobacteria_gi_484075262 hallmark 54;3;3;48 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhodospirillales;Acetobacteraceae;Saccharibacter Saccharibacter floricola DSM 15669 extrachromosomal linear Cluster_259 Alphaproteobacteria_gi_484075274 hallmark 48;8;15;25 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhodospirillales;Acetobacteraceae;Saccharibacter Saccharibacter floricola DSM 15669 extrachromosomal linear Cluster_3 Alphaproteobacteria_gi_484115409 hallmark 13;5;2;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Phic3unalikevirus;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Sphingomonadales;Sphingomonadaceae;unknown Sphingomonas-like bacterium B12 extrachromosomal linear Cluster_136 Alphaproteobacteria_gi_484132260 hallmark;refseq 11;7;1;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Bradyrhizobiaceae;Rhodopseudomonas Rhodopseudomonas sp. B29 extrachromosomal linear Cluster_3 Alphaproteobacteria_gi_484132262 hallmark 22;7;5;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Bradyrhizobiaceae;Rhodopseudomonas Rhodopseudomonas sp. B29 extrachromosomal linear Cluster_301 Alphaproteobacteria_gi_484196661 hallmark 25;5;8;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;Loktanella Loktanella hongkongensis DSM 17492 extrachromosomal circular Cluster_20 Alphaproteobacteria_gi_484205927 refseq 19;8;;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Rhizobiaceae;Sinorhizobium Sinorhizobium medicae WSM1369 extrachromosomal linear Cluster_137 Alphaproteobacteria_gi_484205957 refseq 22;11;;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Rhizobiaceae;Sinorhizobium Sinorhizobium medicae WSM1369 extrachromosomal linear Cluster_301 Alphaproteobacteria_gi_484205980 hallmark 22;7;3;12 Viruses;dsDNA viruses no RNA stage;unclassified;unclassified;unknown;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Rhizobiaceae;Sinorhizobium Sinorhizobium medicae WSM1369 extrachromosomal linear Cluster_177 Alphaproteobacteria_gi_484225362-0-14781 refseq 24;11;3;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Caulobacterales;Caulobacteraceae;Caulobacter Caulobacter sp. JGI 0001013-O16 prophage linear unclustered Alphaproteobacteria_gi_484225386-4307-26230 hallmark;vdb 27;6;3;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Caulobacterales;Caulobacteraceae;Caulobacter Caulobacter sp. JGI 0001013-O16 prophage linear Cluster_1 Alphaproteobacteria_gi_484226341-0-28070 hallmark;refseq 36;20;5;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Sphingomonadales;Sphingomonadaceae;Novosphingobium Novosphingobium nitrogenifigens DSM 19370 prophage linear Cluster_0 Alphaproteobacteria_gi_484235208 hallmark 62;15;5;42 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Rhizobiaceae;Kaistia Kaistia granuli DSM 23481 extrachromosomal circular Cluster_570 Alphaproteobacteria_gi_484345497 hallmark 49;13;10;26 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Rhizobiaceae;Sinorhizobium Sinorhizobium meliloti H1 extrachromosomal linear Cluster_201 Alphaproteobacteria_gi_484345843 hallmark 49;13;10;26 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Rhizobiaceae;Sinorhizobium Sinorhizobium meliloti H1 extrachromosomal linear Cluster_201 Alphaproteobacteria_gi_484345884 hallmark;refseq 28;11;4;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Rhizobiaceae;Sinorhizobium Sinorhizobium meliloti C0438LL extrachromosomal linear Cluster_177 Alphaproteobacteria_gi_484346346-99-20515 hallmark;refseq 29;16;2;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Rhizobiaceae;Sinorhizobium Sinorhizobium meliloti C0438LL prophage linear Cluster_301 Alphaproteobacteria_gi_484346722 hallmark 19;4;4;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Rhizobiaceae;Sinorhizobium Sinorhizobium meliloti C0431A extrachromosomal linear Cluster_201 Alphaproteobacteria_gi_484347313-2-32895 hallmark;refseq 42;12;4;26 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unclassified;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Rhizobiaceae;Sinorhizobium Sinorhizobium meliloti C0431A prophage linear Cluster_563 Alphaproteobacteria_gi_484348689 hallmark;refseq 52;20;;32 Viruses;dsDNA viruses no RNA stage;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Rhizobiaceae;Sinorhizobium Sinorhizobium meliloti AK75 extrachromosomal linear Cluster_352 Alphaproteobacteria_gi_484349127 hallmark;vdb 18;2;6;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Rhizobiaceae;Sinorhizobium Sinorhizobium meliloti AK11 extrachromosomal linear Cluster_42 Alphaproteobacteria_gi_484349863 hallmark 78;16;13;49 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Rhizobiaceae;Sinorhizobium Sinorhizobium meliloti AE608H extrachromosomal linear Cluster_349 Alphaproteobacteria_gi_484350062 hallmark 18;4;5;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Rhizobiaceae;Sinorhizobium Sinorhizobium meliloti AE608H extrachromosomal linear Cluster_201 Alphaproteobacteria_gi_484350120 hallmark;refseq 23;9;5;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Rhizobiaceae;Sinorhizobium Sinorhizobium meliloti AE608H extrachromosomal linear Cluster_177 Alphaproteobacteria_gi_484350290 hallmark;refseq 33;11;4;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Rhizobiaceae;Sinorhizobium Sinorhizobium meliloti AE608H extrachromosomal linear Cluster_432 Alphaproteobacteria_gi_484350991 hallmark 16;5;4;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Rhizobiaceae;Sinorhizobium Sinorhizobium meliloti A0643DD extrachromosomal linear Cluster_201 Alphaproteobacteria_gi_484351058 hallmark 16;5;4;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Rhizobiaceae;Sinorhizobium Sinorhizobium meliloti A0643DD extrachromosomal linear Cluster_201 Alphaproteobacteria_gi_484351429 hallmark 15;5;;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Rhizobiaceae;Sinorhizobium Sinorhizobium meliloti A0641M extrachromosomal linear Cluster_436 Alphaproteobacteria_gi_484351531-3486-47539 hallmark 51;12;9;30 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Rhizobiaceae;Sinorhizobium Sinorhizobium meliloti A0641M prophage linear Cluster_349 Alphaproteobacteria_gi_484351542 hallmark 15;5;;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Rhizobiaceae;Sinorhizobium Sinorhizobium meliloti A0641M extrachromosomal linear Cluster_436 Alphaproteobacteria_gi_484351824 hallmark;refseq 37;13;3;21 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Rhizobiaceae;Sinorhizobium Sinorhizobium meliloti A0641M extrachromosomal linear Cluster_432 Alphaproteobacteria_gi_484351870 hallmark;refseq 16;7;;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Rhizobiaceae;Sinorhizobium Sinorhizobium meliloti A0641M extrachromosomal linear Cluster_4 Alphaproteobacteria_gi_484351963 hallmark 45;8;10;27 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Rhizobiaceae;Sinorhizobium Sinorhizobium meliloti A0641M extrachromosomal linear Cluster_349 Alphaproteobacteria_gi_484352290 hallmark 24;9;4;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Rhizobiaceae;Sinorhizobium Sinorhizobium meliloti 5A14 extrachromosomal linear Cluster_177 Alphaproteobacteria_gi_484352338 hallmark 24;9;4;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Rhizobiaceae;Sinorhizobium Sinorhizobium meliloti 5A14 extrachromosomal linear Cluster_177 Alphaproteobacteria_gi_484352401 hallmark 21;8;3;10 Viruses;dsDNA viruses no RNA stage;unclassified;unclassified;unknown;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Rhizobiaceae;Sinorhizobium Sinorhizobium meliloti 5A14 extrachromosomal linear Cluster_177 Alphaproteobacteria_gi_484352444 hallmark 11;2;1;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Rhizobiaceae;Sinorhizobium Sinorhizobium meliloti 5A14 extrachromosomal linear Cluster_349 Alphaproteobacteria_gi_484352467-8296-37690 hallmark 34;10;2;22 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Rhizobiaceae;Sinorhizobium Sinorhizobium meliloti 5A14 prophage linear Cluster_352 Alphaproteobacteria_gi_484352955-0-41431 hallmark;refseq 55;17;5;33 Viruses;dsDNA viruses no RNA stage;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Rhizobiaceae;Sinorhizobium Sinorhizobium meliloti 1A42 prophage linear Cluster_352 Alphaproteobacteria_gi_484353035 hallmark;vdb 16;3;1;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Rhizobiaceae;Sinorhizobium Sinorhizobium meliloti 1A42 extrachromosomal linear unclustered Alphaproteobacteria_gi_485046112-0-21388 hallmark 35;11;;24 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Sphingomonadales;Sphingomonadaceae;Sphingomonas Sphingomonas sp. ATCC 31555 prophage linear Cluster_4 Alphaproteobacteria_gi_485050827-10807-62500 hallmark;vdb 63;17;7;39 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Beijerinckiaceae;Chelatococcus Chelatococcus sp. GW1 prophage linear Cluster_17 Alphaproteobacteria_gi_485068261 hallmark;refseq 46;24;4;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Sphingomonadales;Sphingomonadaceae;Sphingomonas Sphingomonas sp. Mn802worker extrachromosomal linear Cluster_0 Alphaproteobacteria_gi_485071565 hallmark;refseq 90;42;7;41 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Rhizobiaceae;Agrobacterium Agrobacterium sp. 10MFCol1.1 extrachromosomal circular Cluster_218 Alphaproteobacteria_gi_485071566 hallmark 71;10;5;56 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Rhizobiaceae;Agrobacterium Agrobacterium sp. 10MFCol1.1 extrachromosomal circular Cluster_203 Alphaproteobacteria_gi_485091527-14351-46301 hallmark;refseq 45;23;7;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhodospirillales;Rhodospirillaceae;Novispirillum Novispirillum itersonii subsp. itersonii ATCC 12639 prophage linear Cluster_0 Alphaproteobacteria_gi_485099451 hallmark 68;12;19;37 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;Loktanella Loktanella vestfoldensis DSM 16212 extrachromosomal linear Cluster_136 Alphaproteobacteria_gi_486307128-0-45017 hallmark 77;15;3;59 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Caulobacterales;Caulobacteraceae;Caulobacter Caulobacter sp. JGI 0001010-J14 prophage linear Cluster_455 Alphaproteobacteria_gi_486351604 refseq;vdb 35;10;6;19 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Alphaproteobacteria;unknown;unknown;unknown alpha proteobacterium SCGC AAA300-J04 extrachromosomal linear unclustered Alphaproteobacteria_gi_486400337-6784-43731 hallmark 50;12;6;32 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Aurantimonadaceae;Aureimonas Aureimonas ureilytica DSM 18598 prophage linear Cluster_0 Alphaproteobacteria_gi_486400373 hallmark;refseq 46;13;3;30 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Aurantimonadaceae;Aureimonas Aureimonas ureilytica DSM 18598 extrachromosomal linear Cluster_342 Alphaproteobacteria_gi_486400801-1185-10398 refseq 15;8;2;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Aurantimonadaceae;Aureimonas Aureimonas ureilytica DSM 18598 prophage linear Cluster_218 Alphaproteobacteria_gi_486421658 refseq 28;12;;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Alphaproteobacteria;unknown;unknown;unknown alpha proteobacterium SCGC AAA160-J14 extrachromosomal linear unclustered Alphaproteobacteria_gi_487379952 hallmark 82;21;2;59 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Methylobacteriaceae;Methylobacterium Methylobacterium sp. 285MFTsu5.1 extrachromosomal linear Cluster_587 Alphaproteobacteria_gi_487380020 hallmark 72;6;3;63 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Methylobacteriaceae;Methylobacterium Methylobacterium sp. 285MFTsu5.1 extrachromosomal linear unclustered Alphaproteobacteria_gi_487404945-2532390-2577293 hallmark;refseq 59;26;6;27 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Methylocystaceae;Methylopila Methylopila sp. M107 prophage linear Cluster_101 Alphaproteobacteria_gi_491810426 hallmark 23;8;2;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;Ruegeria Ruegeria mobilis F1926 extrachromosomal linear Cluster_2 Alphaproteobacteria_gi_491815706 hallmark;refseq 28;12;4;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;Ruegeria Ruegeria mobilis F1926 extrachromosomal linear Cluster_101 Alphaproteobacteria_gi_494011385 hallmark;noncaudo 4;2;;2 Viruses;ssDNA viruses;unknown;Microviridae;Chlamydiamicrovirus;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Sphingomonadales;Sphingomonadaceae;Sphingobium Sphingobium japonicum BiD32 extrachromosomal linear Cluster_140 Alphaproteobacteria_gi_511098063 hallmark;refseq 53;27;9;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Bartonellaceae;Bartonella Bartonella vinsonii subsp. berkhoffii str. Tweed extrachromosomal linear Cluster_101 Alphaproteobacteria_gi_511098065 hallmark;refseq 51;27;9;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Bartonellaceae;Bartonella Bartonella vinsonii subsp. berkhoffii str. Tweed extrachromosomal linear Cluster_101 Alphaproteobacteria_gi_511098066-102560-145358 hallmark;refseq;vdb 52;27;10;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Bartonellaceae;Bartonella Bartonella vinsonii subsp. berkhoffii str. Tweed prophage linear Cluster_101 Alphaproteobacteria_gi_511098067 hallmark;refseq 56;28;9;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Bartonellaceae;Bartonella Bartonella vinsonii subsp. berkhoffii str. Tweed extrachromosomal linear Cluster_101 Alphaproteobacteria_gi_511098068-31297-62538 hallmark;refseq 41;14;9;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Bartonellaceae;Bartonella Bartonella vinsonii subsp. berkhoffii str. Tweed prophage linear Cluster_203 Alphaproteobacteria_gi_511098068-381-17654 hallmark;refseq 25;14;2;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Bartonellaceae;Bartonella Bartonella vinsonii subsp. berkhoffii str. Tweed prophage linear Cluster_101 Alphaproteobacteria_gi_511098069 hallmark;refseq 52;27;9;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Bartonellaceae;Bartonella Bartonella vinsonii subsp. berkhoffii str. Tweed extrachromosomal linear Cluster_101 Alphaproteobacteria_gi_511767980 hallmark 22;4;1;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Brucellaceae;Pseudochrobactrum Pseudochrobactrum sp. AO18b extrachromosomal linear Cluster_201 Alphaproteobacteria_gi_513139191 hallmark;refseq 28;14;4;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Hyphomonadaceae;Maricaulis Maricaulis sp. JL2009 extrachromosomal linear Cluster_42 Alphaproteobacteria_gi_514075839 hallmark 62;18;4;40 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Alphaproteobacteria;Sphingomonadales;Sphingomonadaceae;Sphingobium Sphingobium sp. YL23 extrachromosomal linear Cluster_183 Alphaproteobacteria_gi_523692486 hallmark;refseq 60;21;11;28 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Rhizobiaceae;Agrobacterium Agrobacterium radiobacter DSM 30147 extrachromosomal linear Cluster_0 Alphaproteobacteria_gi_523699749-22568-54642 hallmark 39;5;5;29 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Sphingomonadales;Sphingomonadaceae;Sphingobium Sphingobium chinhatense IP26 prophage linear Cluster_326 Alphaproteobacteria_gi_523700511 refseq;vdb 9;1;4;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Sphingomonadales;Sphingomonadaceae;Sphingobium Sphingobium chinhatense IP26 extrachromosomal linear Cluster_42 Alphaproteobacteria_gi_523701341 hallmark;refseq 16;7;1;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Yualikevirus;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Sphingomonadales;Sphingomonadaceae;Sphingobium Sphingobium chinhatense IP26 extrachromosomal linear Cluster_326 Alphaproteobacteria_gi_523701355 hallmark;refseq 16;7;1;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Yualikevirus;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Sphingomonadales;Sphingomonadaceae;Sphingobium Sphingobium chinhatense IP26 extrachromosomal linear Cluster_326 Alphaproteobacteria_gi_523702149 hallmark 18;3;5;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Sphingomonadales;Sphingomonadaceae;Sphingobium Sphingobium chinhatense IP26 extrachromosomal linear unclustered Alphaproteobacteria_gi_523703156 hallmark 13;5;;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Sphingomonadales;Sphingomonadaceae;Sphingobium Sphingobium chinhatense IP26 extrachromosomal linear Cluster_326 Alphaproteobacteria_gi_544701511 hallmark 42;10;10;22 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhodospirillales;Rhodospirillaceae;Phaeospirillum Phaeospirillum fulvum MGU-K5 extrachromosomal linear Cluster_3 Alphaproteobacteria_gi_544702032 hallmark;refseq 32;14;9;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhodospirillales;Rhodospirillaceae;Phaeospirillum Phaeospirillum fulvum MGU-K5 extrachromosomal linear Cluster_3 Alphaproteobacteria_gi_544702296 hallmark 21;7;;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Alphaproteobacteria;Rhodospirillales;Rhodospirillaceae;Phaeospirillum Phaeospirillum fulvum MGU-K5 extrachromosomal linear unclustered Alphaproteobacteria_gi_544818519 hallmark 22;4;2;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;T7likevirus;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Sphingomonadales;Sphingomonadaceae;Novosphingobium Novosphingobium lindaniclasticum LE124 extrachromosomal linear Cluster_9 Alphaproteobacteria_gi_544818927-6137-37414 hallmark;vdb 40;16;3;21 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;T7likevirus;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Sphingomonadales;Sphingomonadaceae;Novosphingobium Novosphingobium lindaniclasticum LE124 prophage linear Cluster_58 Alphaproteobacteria_gi_544908096 hallmark 19;6;6;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Sphingomonadales;Sphingomonadaceae;Sphingobium Sphingobium ummariense RL-3 extrachromosomal linear Cluster_3 Alphaproteobacteria_gi_544909599 hallmark 40;8;5;27 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Sphingomonadales;Sphingomonadaceae;Sphingobium Sphingobium ummariense RL-3 extrachromosomal linear Cluster_326 Alphaproteobacteria_gi_547459329 hallmark 15;3;;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhodospirillales;Acetobacteraceae;Acetobacter Acetobacter sp. CAG:267 extrachromosomal linear Cluster_313 Alphaproteobacteria_gi_547776269-554-11103 hallmark;refseq;vdb 14;11;;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhodospirillales;Rhodospirillaceae;Azospirillum Azospirillum sp. CAG:260 prophage linear Cluster_7 Alphaproteobacteria_gi_547784706 hallmark;refseq;vdb 17;8;3;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhodospirillales;Rhodospirillaceae;Azospirillum Azospirillum sp. CAG:239 extrachromosomal linear Cluster_0 Alphaproteobacteria_gi_547785573-39959-52534 hallmark 19;5;1;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhodospirillales;Rhodospirillaceae;Azospirillum Azospirillum sp. CAG:239 prophage linear Cluster_114 Alphaproteobacteria_gi_549951343 hallmark 46;14;5;27 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Brucellaceae;Ochrobactrum Ochrobactrum intermedium 229E extrachromosomal linear Cluster_26 Alphaproteobacteria_gi_550978692 hallmark 28;4;11;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Yualikevirus;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhodospirillales;Rhodospirillaceae;Fodinicurvata Fodinicurvata sediminis DSM 21159 extrachromosomal linear unclustered Alphaproteobacteria_gi_557832083 hallmark;refseq 15;12;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Caulobacterales;Caulobacteraceae;Asticcacaulis Asticcacaulis sp. AC466 extrachromosomal linear Cluster_149 Alphaproteobacteria_gi_557832156 refseq 76;25;;51 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Caulobacterales;Caulobacteraceae;Asticcacaulis Asticcacaulis sp. AC466 extrachromosomal linear Cluster_149 Alphaproteobacteria_gi_558562543-24663-106868 hallmark 78;23;30;25 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rickettsiales;Anaplasmataceae;Wolbachia Wolbachia pipientis wMelPop prophage linear Cluster_181 Alphaproteobacteria_gi_560138247 hallmark;refseq 48;22;7;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Sphingomonadales;Sphingomonadaceae;Zymomonas Zymomonas mobilis subsp. mobilis str. CP4 = NRRL B-14023 extrachromosomal linear Cluster_0 Alphaproteobacteria_gi_563528539 hallmark 23;5;;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Phyllobacteriaceae;Mesorhizobium Mesorhizobium sp. LNJC403B00 extrachromosomal linear Cluster_313 Alphaproteobacteria_gi_563537402 hallmark 21;4;;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Phyllobacteriaceae;Mesorhizobium Mesorhizobium sp. LNJC395A00 extrachromosomal linear Cluster_313 Alphaproteobacteria_gi_563543012 hallmark 9;2;;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Phyllobacteriaceae;Mesorhizobium Mesorhizobium sp. LNJC391B00 extrachromosomal linear unclustered Alphaproteobacteria_gi_563543678 hallmark 24;3;6;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Phyllobacteriaceae;Mesorhizobium Mesorhizobium sp. LNJC386A00 extrachromosomal linear unclustered Alphaproteobacteria_gi_563543685 hallmark 15;4;;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Phyllobacteriaceae;Mesorhizobium Mesorhizobium sp. LNJC386A00 extrachromosomal linear Cluster_313 Alphaproteobacteria_gi_563545195 hallmark 18;5;;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Phyllobacteriaceae;Mesorhizobium Mesorhizobium sp. LNJC384A00 extrachromosomal linear Cluster_313 Alphaproteobacteria_gi_563575800 refseq 24;9;2;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Phic3unalikevirus;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Phyllobacteriaceae;Mesorhizobium Mesorhizobium sp. LNHC221B00 extrachromosomal linear Cluster_301 Alphaproteobacteria_gi_564007046 hallmark 13;2;2;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Phyllobacteriaceae;Mesorhizobium Mesorhizobium sp. L103C119B0 extrachromosomal linear Cluster_510 Alphaproteobacteria_gi_564013440-0-38639 hallmark;refseq 47;26;2;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Sphingomonadales;Sphingomonadaceae;Blastomonas Blastomonas sp. CACIA14H2 prophage linear Cluster_0 Alphaproteobacteria_gi_565826716 hallmark 44;10;10;24 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;Rhodobacter Rhodobacter capsulatus DE442 extrachromosomal linear Cluster_136 Alphaproteobacteria_gi_565828300-11201-39437 hallmark;vdb 37;12;10;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;Rhodobacter Rhodobacter capsulatus YW1 prophage linear Cluster_126 Alphaproteobacteria_gi_565828556 hallmark 19;5;3;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;Rhodobacter Rhodobacter capsulatus YW1 extrachromosomal linear Cluster_136 Alphaproteobacteria_gi_565828729 hallmark;refseq 121;71;15;35 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;Rhodobacter Rhodobacter capsulatus YW1 extrachromosomal linear Cluster_3 Alphaproteobacteria_gi_565833173-67658-102706 hallmark 40;10;7;23 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;Rhodobacter Rhodobacter capsulatus YW2 prophage linear Cluster_136 Alphaproteobacteria_gi_565842009 hallmark 44;10;10;24 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;Rhodobacter Rhodobacter capsulatus Y262 extrachromosomal linear Cluster_136 Alphaproteobacteria_gi_565843078 hallmark 44;10;10;24 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;Rhodobacter Rhodobacter capsulatus R121 extrachromosomal linear Cluster_136 Alphaproteobacteria_gi_567406774 hallmark 46;14;3;29 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Sphingomonadales;Sphingomonadaceae;Sphingobium Sphingobium sp. C100 extrachromosomal linear Cluster_342 Alphaproteobacteria_gi_568305927 hallmark 55;15;6;34 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;Phaeobacter Phaeobacter gallaeciensis DSM 26640 extrachromosomal linear Cluster_436 Alphaproteobacteria_gi_584596132 hallmark;vdb 12;2;4;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rickettsiales;Holosporaceae;Holospora Holospora undulata HU1 extrachromosomal linear Cluster_42 Alphaproteobacteria_gi_584596366-8919-59450 hallmark;refseq 65;16;23;26 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rickettsiales;Holosporaceae;Holospora Holospora undulata HU1 prophage linear Cluster_181 Alphaproteobacteria_gi_83309099-2600211-2620488 noncaudo 42;6;;36 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Alphaproteobacteria;Rhodospirillales;Rhodospirillaceae;Magnetospirillum Magnetospirillum magneticum AMB-1 prophage linear unclustered Bacilli_gi_116510843-1036732-1072360 hallmark;refseq 59;49;4;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Lactococcus Lactococcus lactis subsp. cremoris SK11 prophage linear Cluster_159 Bacilli_gi_116628683-612264-680268 hallmark;refseq 100;94;;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus gasseri ATCC 33323 prophage linear Cluster_141 Bacilli_gi_118445179 hallmark;refseq 80;33;21;26 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus thuringiensis str. Al Hakam extrachromosomal linear Cluster_268 Bacilli_gi_125622882-779007-819130 hallmark;refseq 61;49;4;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Lactococcus Lactococcus lactis subsp. cremoris MG1363 prophage linear Cluster_195 Bacilli_gi_126652723-0-48258 hallmark 66;19;14;33 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus sp. B14905 prophage linear Cluster_19 Bacilli_gi_139472888-1271278-1308146 hallmark;refseq 58;50;1;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes str. Manfredo prophage linear Cluster_68 Bacilli_gi_139472888-654135-687352 hallmark;refseq 55;50;1;4 Viruses;unclassified;unclassified;unclassified;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes str. Manfredo prophage linear Cluster_57 Bacilli_gi_148266447-1076286-1121209 hallmark;refseq 63;59;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus JH9 prophage linear Cluster_6 Bacilli_gi_148266447-361134-403447 hallmark;refseq 65;61;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus JH9 prophage linear Cluster_8 Bacilli_gi_148986114 hallmark;refseq 42;34;;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae SP3-BS71 extrachromosomal linear Cluster_31 Bacilli_gi_148990169-4745-39384 hallmark;refseq 55;37;5;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae SP6-BS73 prophage linear Cluster_50 Bacilli_gi_148998951 hallmark;refseq 48;35;3;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae SP11-BS70 extrachromosomal linear Cluster_30 Bacilli_gi_149004075 hallmark;refseq 46;28;3;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae SP14-BS69 extrachromosomal linear Cluster_30 Bacilli_gi_149004357 hallmark;refseq 21;13;1;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae SP14-BS69 extrachromosomal linear Cluster_50 Bacilli_gi_149004388 hallmark;refseq 37;27;3;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae SP14-BS69 extrachromosomal linear Cluster_50 Bacilli_gi_149008029 hallmark;refseq 53;52;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae SP18-BS74 extrachromosomal linear Cluster_52 Bacilli_gi_149012670-25250-58304 hallmark;refseq 52;36;4;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae SP19-BS75 prophage linear Cluster_50 Bacilli_gi_150392480-1076160-1121083 hallmark;refseq 63;59;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus JH1 prophage linear Cluster_6 Bacilli_gi_150392480-361204-403517 hallmark;refseq 65;61;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus JH1 prophage linear Cluster_8 Bacilli_gi_151220212-1098873-1141372 hallmark;refseq 66;63;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus str. Newman prophage linear Cluster_8 Bacilli_gi_151220212-320821-363215 hallmark;refseq 68;68;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus str. Newman prophage linear Cluster_8 Bacilli_gi_15671982-1414087-1456974 hallmark;refseq 60;57;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Lactococcus Lactococcus lactis subsp. lactis Il1403 prophage linear Cluster_32 Bacilli_gi_15671982-450396-517339 hallmark;refseq 99;76;20;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Lactococcus Lactococcus lactis subsp. lactis Il1403 prophage linear Cluster_199 Bacilli_gi_15674250-529606-568538 hallmark;refseq 47;41;1;5 Viruses;unclassified;unclassified;unclassified;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes M1 GAS prophage linear Cluster_90 Bacilli_gi_15674250-775777-819888 hallmark;refseq 66;45;9;12 Viruses;unclassified;unclassified;unclassified;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes M1 GAS prophage linear Cluster_115 Bacilli_gi_161508266-1559658-1607107 hallmark;refseq 66;63;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus USA300_TCH1516 prophage linear Cluster_6 Bacilli_gi_163791513 hallmark;refseq 23;16;3;4 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Carnobacteriaceae;Carnobacterium Carnobacterium sp. AT7 extrachromosomal linear Cluster_145 Bacilli_gi_163805793 hallmark;refseq 55;42;1;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae CDC3059-06 extrachromosomal linear Cluster_31 Bacilli_gi_163805794 hallmark;refseq 57;44;1;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae CDC3059-06 extrachromosomal linear Cluster_31 Bacilli_gi_163805795 hallmark;refseq 51;35;4;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae CDC3059-06 extrachromosomal linear Cluster_31 Bacilli_gi_163805796 hallmark;refseq 47;35;1;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae CDC3059-06 extrachromosomal linear Cluster_31 Bacilli_gi_163805865 hallmark;refseq 56;42;3;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae SP195 extrachromosomal linear Cluster_31 Bacilli_gi_163806165-83466-125628 hallmark;refseq 61;40;11;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae CDC1873-00 prophage linear Cluster_30 Bacilli_gi_163806179 hallmark;refseq 44;30;5;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae CDC1873-00 extrachromosomal linear Cluster_30 Bacilli_gi_163806182 hallmark;refseq 43;28;5;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae CDC1873-00 extrachromosomal linear Cluster_30 Bacilli_gi_163937865 hallmark;refseq 85;29;8;48 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus weihenstephanensis KBAB4 extrachromosomal linear Cluster_365 Bacilli_gi_163937941 hallmark;refseq 71;37;11;23 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus weihenstephanensis KBAB4 extrachromosomal linear Cluster_76 Bacilli_gi_165873068 hallmark;refseq 28;21;3;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus anthracis str. A0488 extrachromosomal linear Cluster_76 Bacilli_gi_167636592 hallmark;refseq 27;20;3;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus anthracis str. A0442 extrachromosomal linear Cluster_76 Bacilli_gi_167641861 hallmark;refseq 31;21;5;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus anthracis str. A0193 extrachromosomal linear Cluster_76 Bacilli_gi_16799079-2406683-2445916 hallmark;refseq 64;46;9;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Listeriaceae;Listeria Listeria innocua Clip11262 prophage linear Cluster_94 Bacilli_gi_16799079-2587855-2625832 hallmark;refseq 62;46;5;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Listeriaceae;Listeria Listeria innocua Clip11262 prophage linear Cluster_31 Bacilli_gi_16802048-2360689-2402391 hallmark;refseq 67;48;10;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Listeriaceae;Listeria Listeria monocytogenes EGD-e prophage linear Cluster_185 Bacilli_gi_169832377-24791-58003 hallmark;refseq 42;30;3;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae Hungary19A-6 prophage linear Cluster_30 Bacilli_gi_169832377-58228-99038 hallmark;refseq 52;50;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;C2likevirus;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae Hungary19A-6 prophage linear Cluster_52 Bacilli_gi_170689508 hallmark;refseq 27;20;3;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus anthracis str. A0465 extrachromosomal linear Cluster_76 Bacilli_gi_170709180 hallmark;refseq 28;21;3;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus anthracis str. A0389 extrachromosomal linear Cluster_76 Bacilli_gi_177654952-9433-40354 hallmark;refseq 49;31;7;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus anthracis str. A0174 prophage linear Cluster_76 Bacilli_gi_177655428 hallmark;refseq 28;21;3;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus anthracis str. A0174 extrachromosomal linear Cluster_76 Bacilli_gi_190569304 hallmark;refseq 27;21;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus anthracis str. Tsiankovskii-I extrachromosomal linear Cluster_76 Bacilli_gi_191636824-1043463-1078200 hallmark;refseq 50;35;3;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus casei BL23 prophage linear Cluster_363 Bacilli_gi_194045650 hallmark;refseq 30;30;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus str. JKD6009 extrachromosomal linear Cluster_40 Bacilli_gi_196037087-0-45570 hallmark;refseq 67;30;19;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus cereus W prophage linear Cluster_268 Bacilli_gi_196042459-4851-52747 hallmark;refseq 79;44;9;26 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus cereus NVH0597-99 prophage linear Cluster_186 Bacilli_gi_196047581 hallmark;refseq 34;15;11;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus cereus 03BB108 extrachromosomal linear Cluster_268 Bacilli_gi_196048419 hallmark;refseq 70;37;6;27 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus cereus 03BB108 extrachromosomal linear Cluster_116 Bacilli_gi_196251034-0-31481 hallmark;refseq 44;27;1;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Geobacillus Geobacillus sp. G11MC16 prophage linear Cluster_150 Bacilli_gi_197326955-40906-83132 hallmark;refseq 73;52;11;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Listeriaceae;Listeria Listeria monocytogenes FSL J1-194 prophage linear Cluster_185 Bacilli_gi_197327012 refseq 20;11;4;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Listeriaceae;Listeria Listeria monocytogenes FSL R2-503 extrachromosomal linear Cluster_94 Bacilli_gi_19745201-1041255-1087764 hallmark;refseq 72;55;8;9 Viruses;unclassified;unclassified;unclassified;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes MGAS8232 prophage linear Cluster_115 Bacilli_gi_19745201-1451819-1493398 hallmark;refseq 64;58;;6 Viruses;unclassified;unclassified;unclassified;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes MGAS8232 prophage linear Cluster_106 Bacilli_gi_19745201-293857-332337 hallmark;refseq 56;53;;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes MGAS8232 prophage linear Cluster_30 Bacilli_gi_19745201-578068-617146 hallmark;refseq 61;51;2;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes MGAS8232 prophage linear Cluster_68 Bacilli_gi_197918280 hallmark;refseq 17;11;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Listeriaceae;Listeria Listeria monocytogenes FSL J1-175 extrachromosomal linear Cluster_94 Bacilli_gi_197918293 hallmark;refseq 22;19;;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Listeriaceae;Listeria Listeria monocytogenes FSL J1-175 extrachromosomal linear Cluster_40 Bacilli_gi_197918713 hallmark;refseq 35;17;9;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Listeriaceae;Listeria Listeria monocytogenes FSL J2-003 extrachromosomal linear Cluster_94 Bacilli_gi_197919513 hallmark;refseq 31;22;1;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Listeriaceae;Listeria Listeria monocytogenes FSL J2-064 extrachromosomal linear Cluster_162 Bacilli_gi_197919527 hallmark;refseq 17;12;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Firmicutes;Bacilli;Bacillales;Listeriaceae;Listeria Listeria monocytogenes FSL J2-064 extrachromosomal linear Cluster_94 Bacilli_gi_197920088-489040-524185 hallmark;refseq 53;40;10;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Listeriaceae;Listeria Listeria monocytogenes F6900 prophage linear Cluster_185 Bacilli_gi_197920144-35141-71365 hallmark;refseq;vdb 59;43;5;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Listeriaceae;Listeria Listeria monocytogenes J2818 prophage linear Cluster_94 Bacilli_gi_197920146 hallmark;refseq 69;52;9;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Listeriaceae;Listeria Listeria monocytogenes J2818 extrachromosomal linear Cluster_185 Bacilli_gi_197921361 hallmark;refseq 35;28;;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Listeriaceae;Listeria Listeria monocytogenes HPB2262 extrachromosomal linear Cluster_162 Bacilli_gi_197921362 hallmark;refseq 19;18;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Listeriaceae;Listeria Listeria monocytogenes HPB2262 extrachromosomal linear Cluster_94 Bacilli_gi_199598923 hallmark;refseq 57;52;;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus rhamnosus HN001 extrachromosomal linear Cluster_127 Bacilli_gi_21281729-1528922-1576884 hallmark;refseq 66;63;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus MW2 prophage linear Cluster_6 Bacilli_gi_217963303-1387838-1431243 hallmark;refseq 68;57;4;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Listeriaceae;Listeria Listeria monocytogenes HCC23 prophage linear Cluster_412 Bacilli_gi_218230750-2507426-2547955 hallmark;refseq 54;40;6;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus cereus B4264 prophage linear Cluster_55 Bacilli_gi_218290702 hallmark 66;17;12;37 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Alicyclobacillaceae;Alicyclobacillus Alicyclobacillus acidocaldarius LAA1 extrachromosomal linear Cluster_467 Bacilli_gi_218847808 hallmark;refseq 116;32;15;69 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus cereus G9842 extrachromosomal linear Cluster_393 Bacilli_gi_218895141-2470312-2513147 hallmark;refseq 54;36;7;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus cereus G9842 prophage linear Cluster_76 Bacilli_gi_21909536-1137718-1172256 hallmark;refseq 55;52;2;1 Viruses;unclassified;unclassified;unclassified;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes MGAS315 prophage linear Cluster_57 Bacilli_gi_21909536-1230279-1271840 hallmark;refseq 64;62;;2 Viruses;unclassified;unclassified;unclassified;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes MGAS315 prophage linear Cluster_106 Bacilli_gi_21909536-1313257-1351275 hallmark;refseq 60;57;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes MGAS315 prophage linear Cluster_196 Bacilli_gi_21909536-749188-788201 hallmark;refseq 57;55;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes MGAS315 prophage linear Cluster_30 Bacilli_gi_21909536-977412-1016695 hallmark;refseq 58;57;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes MGAS315 prophage linear Cluster_68 Bacilli_gi_221079686 hallmark;refseq 25;25;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus str. CF-Marseille extrachromosomal linear Cluster_49 Bacilli_gi_221079725 hallmark;refseq 36;34;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus str. CF-Marseille extrachromosomal linear Cluster_6 Bacilli_gi_221079795 hallmark;refseq 19;19;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus str. CF-Marseille extrachromosomal linear Cluster_40 Bacilli_gi_221079809 refseq 20;18;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus str. CF-Marseille extrachromosomal linear Cluster_6 Bacilli_gi_221230948-1487839-1526889 hallmark;refseq 52;51;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;C2likevirus;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae ATCC 700669 prophage linear Cluster_52 Bacilli_gi_221316922 hallmark 74;24;10;40 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus cereus Q1 extrachromosomal linear Cluster_150 Bacilli_gi_223044298 hallmark;refseq 59;47;4;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus capitis SK14 extrachromosomal linear Cluster_35 Bacilli_gi_223933165-0-37690 hallmark;refseq 56;33;9;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus suis 89/1591 prophage linear Cluster_50 Bacilli_gi_223933546 hallmark;refseq 41;26;4;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus suis 89/1591 extrachromosomal linear Cluster_57 Bacilli_gi_224580166-104901-142362 hallmark;refseq;vdb 54;38;3;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus infantarius subsp. infantarius ATCC BAA-102 prophage linear Cluster_57 Bacilli_gi_22536185-1833293-1867142 hallmark;refseq 49;35;5;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae 2603V/R prophage linear Cluster_30 Bacilli_gi_22536185-558801-608722 hallmark;refseq;vdb 78;40;18;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae 2603V/R prophage linear Cluster_62 Bacilli_gi_225855735-24325-60932 hallmark;refseq 60;47;4;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae P1031 prophage linear Cluster_31 Bacilli_gi_225869487-1742324-1775791 hallmark;refseq 43;32;4;7 Viruses;unclassified phages;;;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus equi subsp. equi 4047 prophage linear Cluster_115 Bacilli_gi_238801476-3248097-3274994 hallmark;refseq 35;28;3;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus cereus BDRD-ST26 prophage linear Cluster_55 Bacilli_gi_238801489-3326471-3348798 hallmark;refseq 27;21;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus cereus AH603 prophage linear Cluster_76 Bacilli_gi_238801498-3721238-3752580 hallmark;refseq 47;32;5;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus thuringiensis serovar tochigiensis BGSC 4Y1 prophage linear Cluster_55 Bacilli_gi_238801502-3570308-3596189 hallmark;refseq 31;23;2;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus thuringiensis serovar pakistani str. T13001 prophage linear Cluster_76 Bacilli_gi_238801511-375045-392169 hallmark;refseq 30;27;;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus thuringiensis IBL 4222 prophage linear Cluster_55 Bacilli_gi_238801511-6544650-6563909 hallmark;refseq 31;26;4;1 Viruses;dsDNA viruses no RNA stage;unknown;Tectiviridae;Tectivirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus thuringiensis IBL 4222 prophage linear Cluster_125 Bacilli_gi_238854975 hallmark;refseq 62;42;6;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus jensenii 269-3 extrachromosomal linear Cluster_473 Bacilli_gi_239633784-516453-546930 hallmark;refseq;vdb 42;27;7;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecium Com12 prophage linear Cluster_90 Bacilli_gi_239948566-843944-882994 hallmark;refseq 61;43;6;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis T1 prophage linear Cluster_178 Bacilli_gi_239948577-632907-671957 hallmark;refseq 62;43;6;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis T3 prophage linear Cluster_178 Bacilli_gi_239948585-620256-656470 hallmark;refseq 55;39;4;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis ATCC 4200 prophage linear Cluster_41 Bacilli_gi_242355587-478649-518482 hallmark;refseq 64;50;5;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis X98 prophage linear Cluster_41 Bacilli_gi_242355587-843387-883784 hallmark;refseq 65;45;7;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis X98 prophage linear Cluster_178 Bacilli_gi_242355652-20677-52016 hallmark;refseq 47;24;6;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Punalikevirus;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus "Enterococcus faecium 1,231,502" prophage linear Cluster_250 Bacilli_gi_242361992 hallmark;refseq 47;42;1;4 Viruses;unclassified phages;unknown;unknown;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis HIP11704 extrachromosomal linear Cluster_107 Bacilli_gi_242362035-373302-413505 hallmark;refseq 62;44;3;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis E1Sol prophage linear Cluster_41 Bacilli_gi_242364200 hallmark;refseq 48;38;1;9 Viruses;unclassified phages;unknown;unknown;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis T2 extrachromosomal linear Cluster_107 Bacilli_gi_242364220 hallmark;refseq 21;13;2;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis DS5 extrachromosomal linear Cluster_17 Bacilli_gi_242364291-479779-521001 hallmark;refseq 55;49;;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis Merz96 prophage linear Cluster_41 Bacilli_gi_242364322-195-41921 hallmark;refseq 59;50;;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus rhamnosus LMS2-1 prophage linear Cluster_133 Bacilli_gi_251781468-1569185-1604459 hallmark;refseq 59;49;1;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus dysgalactiae subsp. equisimilis GGS_124 prophage linear Cluster_196 Bacilli_gi_251833060 hallmark;refseq 64;25;3;36 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Phic3unalikevirus;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus vaginalis ATCC 49540 extrachromosomal linear Cluster_32 Bacilli_gi_251833322 hallmark 42;12;17;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus reuteri CF48-3A extrachromosomal linear Cluster_42 Bacilli_gi_251833402-71867-102264 hallmark;refseq 32;15;5;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus reuteri MM2-3 prophage linear Cluster_32 Bacilli_gi_251833405 hallmark 37;11;5;21 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus reuteri MM2-3 extrachromosomal linear Cluster_32 Bacilli_gi_254036981-363884-405812 hallmark;refseq 67;65;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus 132 prophage linear Cluster_8 Bacilli_gi_254036985-101925-147819 hallmark;refseq 62;58;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus 132 prophage linear Cluster_6 Bacilli_gi_254555169-1024403-1064133 hallmark;refseq 53;36;2;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus plantarum JDM1 prophage linear Cluster_32 Bacilli_gi_255926317-326405-368856 hallmark;refseq 66;64;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus USA300_TCH959 prophage linear Cluster_8 Bacilli_gi_256402468 hallmark;refseq 24;23;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus A9781 extrachromosomal linear Cluster_35 Bacilli_gi_257427710-567989-612181 hallmark;refseq 64;58;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus 65-1322 prophage linear Cluster_6 Bacilli_gi_257430852-0-34240 hallmark;refseq 58;55;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus 68-397 prophage linear Cluster_56 Bacilli_gi_257431371-0-33726 hallmark;refseq 57;51;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus 68-397 prophage linear Cluster_8 Bacilli_gi_257433049-139222-180874 hallmark;refseq 63;57;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus E1410 prophage linear Cluster_8 Bacilli_gi_257436456-0-37773 hallmark;refseq 59;54;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus M876 prophage linear Cluster_56 Bacilli_gi_257436992-0-34673 hallmark;refseq 57;51;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus M876 prophage linear Cluster_8 Bacilli_gi_258420277 hallmark;refseq 32;31;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus A9719 extrachromosomal linear Cluster_6 Bacilli_gi_258421696 hallmark;refseq 24;24;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus A9719 extrachromosomal linear Cluster_35 Bacilli_gi_258427119 hallmark;refseq 33;32;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus A9299 extrachromosomal linear Cluster_6 Bacilli_gi_258428675 refseq 27;24;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus A9299 extrachromosomal linear Cluster_6 Bacilli_gi_258428979 hallmark;refseq 31;30;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus A9299 extrachromosomal linear Cluster_35 Bacilli_gi_258440728 hallmark;refseq 37;36;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus A8115 extrachromosomal linear Cluster_8 Bacilli_gi_258443244 hallmark;refseq 35;35;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus A8115 extrachromosomal linear Cluster_56 Bacilli_gi_258445228 hallmark;refseq 24;22;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus A6300 extrachromosomal linear Cluster_49 Bacilli_gi_258445554 hallmark;refseq 36;34;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus A6300 extrachromosomal linear Cluster_6 Bacilli_gi_258446363 hallmark;refseq 28;26;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus A6300 extrachromosomal linear Cluster_49 Bacilli_gi_258447767 hallmark;refseq 22;21;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus A6224 extrachromosomal linear Cluster_49 Bacilli_gi_258448816 hallmark;refseq 66;62;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus A6224 extrachromosomal linear Cluster_6 Bacilli_gi_258448883-0-41097 hallmark;refseq 65;57;8; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus A6224 prophage linear Cluster_8 Bacilli_gi_258455538 hallmark;refseq 68;61;7; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus A5937 extrachromosomal linear Cluster_6 Bacilli_gi_260663785 hallmark;refseq 31;19;3;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus fermentum 28-3-CHN extrachromosomal linear Cluster_41 Bacilli_gi_260667551 hallmark;refseq 51;30;2;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus extrachromosomal linear Cluster_56 Bacilli_gi_262046743-72999-126896 hallmark;refseq 84;39;7;38 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus crispatus MV-3A-US prophage linear Cluster_206 Bacilli_gi_262047904 hallmark;refseq 15;10;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Phic3unalikevirus;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus crispatus MV-3A-US extrachromosomal linear Cluster_528 Bacilli_gi_262047917 hallmark;refseq 15;10;;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Phic3unalikevirus;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus crispatus MV-3A-US extrachromosomal linear Cluster_528 Bacilli_gi_262049860 hallmark;refseq 62;58;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus D30 extrachromosomal linear Cluster_6 Bacilli_gi_262052887 hallmark;refseq 29;27;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus 930918-3 extrachromosomal linear Cluster_6 Bacilli_gi_262052910 hallmark;refseq 29;26;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus 930918-3 extrachromosomal linear Cluster_49 Bacilli_gi_262053142 hallmark;refseq 10;10;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus 930918-3 extrachromosomal linear Cluster_56 Bacilli_gi_268318562-730561-765995 hallmark;refseq 51;35;2;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus johnsonii FI9785 prophage linear Cluster_41 Bacilli_gi_269201690-2044749-2087988 hallmark;refseq 63;57;1;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus ED98 prophage linear Cluster_6 Bacilli_gi_282904457-0-30668 hallmark;refseq 49;45;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus C160 prophage linear Cluster_8 Bacilli_gi_282905315-580508-628042 hallmark;refseq 64;58;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus Btn1260 prophage linear Cluster_6 Bacilli_gi_282910944-156063-204266 hallmark;refseq 64;62;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus WBG10049 prophage linear Cluster_6 Bacilli_gi_282914756 hallmark;refseq 48;47;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus M899 extrachromosomal linear Cluster_56 Bacilli_gi_282914805 hallmark;refseq 17;17;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus M899 extrachromosomal linear Cluster_40 Bacilli_gi_282919869-0-28714 hallmark;refseq 37;35;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus A9765 prophage linear Cluster_35 Bacilli_gi_282921678-84843-117175 hallmark;refseq 39;37;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus A9765 prophage linear Cluster_6 Bacilli_gi_282924532-0-34588 hallmark;refseq 56;54;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus C101 prophage linear Cluster_56 Bacilli_gi_282925249 hallmark;refseq 17;17;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus C101 extrachromosomal linear Cluster_40 Bacilli_gi_282926077 hallmark;refseq 42;40;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus A9765 extrachromosomal linear Cluster_56 Bacilli_gi_282929075 hallmark;refseq 47;37;8;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus A10102 extrachromosomal linear Cluster_8 Bacilli_gi_284800255-1291115-1335717 hallmark;refseq 67;51;4;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Listeriaceae;Listeria Listeria monocytogenes 08-5578 prophage linear Cluster_162 Bacilli_gi_284800255-2477841-2512950 hallmark;refseq 58;45;9;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Listeriaceae;Listeria Listeria monocytogenes 08-5578 prophage linear Cluster_94 Bacilli_gi_284993440-1257819-1302421 hallmark;refseq 67;51;4;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Listeriaceae;Listeria Listeria monocytogenes 08-5923 prophage linear Cluster_162 Bacilli_gi_284993440-2444572-2479681 hallmark;refseq 58;45;9;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Listeriaceae;Listeria Listeria monocytogenes 08-5923 prophage linear Cluster_94 Bacilli_gi_288904223-449737-494815 hallmark;refseq;vdb 58;41;4;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus gallolyticus UCN34 prophage linear Cluster_88 Bacilli_gi_28894912-1107932-1147568 hallmark;refseq 57;55;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes SSI-1 prophage linear Cluster_30 Bacilli_gi_28894912-545611-583628 hallmark;refseq 60;57;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes SSI-1 prophage linear Cluster_196 Bacilli_gi_28894912-625045-666606 hallmark;refseq 64;62;;2 Viruses;unclassified;unclassified;unclassified;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes SSI-1 prophage linear Cluster_106 Bacilli_gi_28894912-724628-759166 hallmark;refseq 55;52;2;1 Viruses;unclassified;unclassified;unclassified;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes SSI-1 prophage linear Cluster_57 Bacilli_gi_28894912-880188-919089 hallmark;refseq 60;58;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes SSI-1 prophage linear Cluster_68 Bacilli_gi_289166909-398200-442838 hallmark;refseq 74;56;4;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus mitis B6 prophage linear Cluster_15 Bacilli_gi_289166909-738608-743776 noncaudo 4;3;1; Viruses;ssDNA viruses;unknown;Inoviridae;Plectrovirus;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus mitis B6 prophage linear Cluster_143 Bacilli_gi_289566704 hallmark;refseq 27;16;3;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecium D344SRF extrachromosomal linear Cluster_6 Bacilli_gi_289566803 hallmark;refseq 22;20;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecium D344SRF extrachromosomal linear Cluster_119 Bacilli_gi_289567068 hallmark;refseq 17;16;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecium D344SRF extrachromosomal linear Cluster_41 Bacilli_gi_289567086 hallmark;refseq 18;11;2;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Punalikevirus;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecium D344SRF extrachromosomal linear Cluster_222 Bacilli_gi_289567104 refseq;vdb 12;6;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecium D344SRF extrachromosomal linear Cluster_350 Bacilli_gi_289567117 hallmark;refseq 17;14;1;2 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecium D344SRF extrachromosomal linear Cluster_145 Bacilli_gi_290891479 hallmark;refseq 46;28;4;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Leuconostocaceae;Oenococcus Oenococcus oeni AWRIB429 extrachromosomal linear Cluster_32 Bacilli_gi_290891529 hallmark;refseq 51;49;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Leuconostocaceae;Oenococcus Oenococcus oeni AWRIB429 extrachromosomal linear Cluster_32 Bacilli_gi_290891575 hallmark;refseq 19;15;1;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Leuconostocaceae;Oenococcus Oenococcus oeni AWRIB429 extrachromosomal linear Cluster_157 Bacilli_gi_293379989 hallmark;refseq 52;22;5;25 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus crispatus 214-1 extrachromosomal linear Cluster_206 Bacilli_gi_293380154 hallmark;refseq 17;9;2;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus crispatus 214-1 extrachromosomal linear Cluster_206 Bacilli_gi_293510791 hallmark;refseq 17;17;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus M809 extrachromosomal linear Cluster_40 Bacilli_gi_293530869-0-34116 hallmark;refseq 56;54;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus M1015 prophage linear Cluster_56 Bacilli_gi_293545390 hallmark;refseq 17;17;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus M1015 extrachromosomal linear Cluster_40 Bacilli_gi_293553367 hallmark;refseq 31;19;6;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecium E1039 extrachromosomal linear Cluster_90 Bacilli_gi_293553727 hallmark;refseq 31;19;2;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecium E1039 extrachromosomal linear Cluster_41 Bacilli_gi_293570856 hallmark;refseq 44;23;11;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecium E980 extrachromosomal linear Cluster_32 Bacilli_gi_293572592 hallmark;refseq 48;25;9;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecium E980 extrachromosomal linear Cluster_41 Bacilli_gi_29374661-289329-326210 hallmark;refseq 55;50;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis V583 prophage linear Cluster_17 Bacilli_gi_294614749 hallmark;refseq 28;14;5;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Punalikevirus;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecium E1636 extrachromosomal linear Cluster_222 Bacilli_gi_294616019 hallmark;refseq 23;19;;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecium E1636 extrachromosomal linear Cluster_119 Bacilli_gi_294617236 hallmark;refseq 18;12;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecium E1679 extrachromosomal linear Cluster_52 Bacilli_gi_294617253 refseq 8;5;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecium E1679 extrachromosomal linear Cluster_90 Bacilli_gi_294619674 refseq 27;13;4;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecium E1679 extrachromosomal linear Cluster_30 Bacilli_gi_294622454 hallmark;refseq 51;24;11;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Punalikevirus;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecium U0317 extrachromosomal linear Cluster_250 Bacilli_gi_294780266-5960-38382 hallmark;refseq 49;33;2;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis PC1.1 prophage linear Cluster_30 Bacilli_gi_294848397-86711-134161 hallmark;refseq 67;64;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus A9754 prophage linear Cluster_6 Bacilli_gi_295406379-166170-200939 hallmark;refseq 59;58;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus A8819 prophage linear Cluster_8 Bacilli_gi_295407444-2839-30993 hallmark;refseq 38;37;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus A8819 prophage linear Cluster_40 Bacilli_gi_295407487 hallmark;refseq 52;50;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus A8819 extrachromosomal linear Cluster_8 Bacilli_gi_295407538 hallmark;refseq 35;34;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus A8819 extrachromosomal linear Cluster_6 Bacilli_gi_295407646 refseq 26;22;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus A8819 extrachromosomal linear Cluster_6 Bacilli_gi_295427484-583274-630529 hallmark;refseq 69;65;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus EMRSA16 prophage linear Cluster_6 Bacilli_gi_295823229 hallmark;refseq 25;25;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus MR1 extrachromosomal linear Cluster_40 Bacilli_gi_295823231 hallmark;refseq 22;22;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus MR1 extrachromosomal linear Cluster_49 Bacilli_gi_295823236 hallmark;refseq 20;19;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus MR1 extrachromosomal linear Cluster_6 Bacilli_gi_296500838-2496144-2537191 hallmark;refseq 52;33;8;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus thuringiensis BMB171 prophage linear Cluster_76 Bacilli_gi_297210119-386629-430201 hallmark;refseq 61;58;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus ATCC 51811 prophage linear Cluster_6 Bacilli_gi_297210123 hallmark;refseq 11;10;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus ATCC 51811 extrachromosomal linear Cluster_56 Bacilli_gi_297245106-166113-184964 hallmark;refseq 42;41;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus A8796 prophage linear Cluster_8 Bacilli_gi_297246568 hallmark;refseq 32;31;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus A8796 extrachromosomal linear Cluster_6 Bacilli_gi_297246647 hallmark;refseq 29;28;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus A8796 extrachromosomal linear Cluster_49 Bacilli_gi_298527634-2267561-2314536 hallmark;refseq 65;61;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus MN8 prophage linear Cluster_6 Bacilli_gi_300765818 hallmark;refseq 77;73;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Listeriaceae;Listeria Listeria monocytogenes FSL N1-017 extrachromosomal linear Cluster_29 Bacilli_gi_300766147 hallmark;refseq 40;32;;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Listeriaceae;Listeria Listeria monocytogenes FSL N1-017 extrachromosomal linear Cluster_162 Bacilli_gi_300766274 hallmark;refseq 38;28;4;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Listeriaceae;Listeria Listeria monocytogenes FSL N1-017 extrachromosomal linear Cluster_94 Bacilli_gi_300766310 hallmark;refseq 25;21;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Listeriaceae;Listeria Listeria monocytogenes FSL N1-017 extrachromosomal linear Cluster_185 Bacilli_gi_300860136-583915-626439 hallmark;refseq 63;62;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis TUSoD Ef11 prophage linear Cluster_41 Bacilli_gi_301299418 refseq 25;15;2;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus salivarius ACS-116-V-Col5a extrachromosomal linear Cluster_88 Bacilli_gi_301299539 hallmark;refseq 18;11;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus salivarius ACS-116-V-Col5a extrachromosomal linear Cluster_32 Bacilli_gi_301300595 hallmark;refseq 20;11;5;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus salivarius ACS-116-V-Col5a extrachromosomal linear Cluster_52 Bacilli_gi_301300708 hallmark;refseq 46;20;3;23 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus salivarius ACS-116-V-Col5a extrachromosomal linear Cluster_6 Bacilli_gi_303255421 hallmark;refseq 48;36;2;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae BS455 extrachromosomal linear Cluster_31 Bacilli_gi_303255644-0-32908 hallmark;refseq 58;38;3;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae BS455 prophage linear Cluster_50 Bacilli_gi_303259084-189885-216145 hallmark;refseq 47;36;2;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae SP-BS293 prophage linear Cluster_31 Bacilli_gi_303260813-209928-244198 hallmark;refseq 54;43;2;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae SP14-BS292 prophage linear Cluster_31 Bacilli_gi_303263141-210757-245027 hallmark;refseq 54;43;2;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae BS397 prophage linear Cluster_31 Bacilli_gi_303265420-110956-137418 hallmark;refseq 47;36;2;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae BS457 prophage linear Cluster_31 Bacilli_gi_303267755-75727-109991 hallmark;refseq 54;43;2;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae BS458 prophage linear Cluster_31 Bacilli_gi_306828415 hallmark;refseq 59;51;1;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes ATCC 10782 extrachromosomal linear Cluster_106 Bacilli_gi_307126151-1989757-2030527 hallmark;refseq 64;44;3;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae 670-6B prophage linear Cluster_50 Bacilli_gi_307710001-0-28645 hallmark;refseq 52;37;1;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus mitis SK564 prophage linear Cluster_31 Bacilli_gi_308171891-870032-907063 hallmark;refseq 52;33;5;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus amyloliquefaciens DSM 7 prophage linear Cluster_6 Bacilli_gi_309804985 hallmark;refseq 56;29;5;22 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus iners LactinV 09V1-c extrachromosomal linear Cluster_334 Bacilli_gi_309806790 hallmark;refseq 54;30;4;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus iners LactinV 03V1-b extrachromosomal linear Cluster_334 Bacilli_gi_311744845-1757962-1803995 hallmark;refseq 65;62;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus TCH70 prophage linear Cluster_6 Bacilli_gi_312868614 hallmark;refseq 32;17;2;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus oris PB013-T2-3 extrachromosomal linear Cluster_88 Bacilli_gi_312870611 hallmark;refseq 25;14;3;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus oris PB013-T2-3 extrachromosomal linear Cluster_41 Bacilli_gi_312873770 hallmark;refseq 51;30;3;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus iners LEAF 2052A-d extrachromosomal linear Cluster_68 Bacilli_gi_312977117-201829-259634 hallmark;refseq;vdb 87;37;18;32 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus crispatus CTV-05 prophage linear Cluster_206 Bacilli_gi_315037230-1441600-1487975 hallmark;refseq 66;34;5;27 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus amylovorus GRL 1112 prophage linear Cluster_52 Bacilli_gi_315649228-69696-99291 hallmark;refseq 37;22;5;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Paenibacillaceae;Paenibacillus Paenibacillus vortex V453 prophage linear Cluster_15 Bacilli_gi_323649861-519095-555231 hallmark;refseq;vdb 47;28;2;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus ruminis ATCC 25644 prophage linear Cluster_399 Bacilli_gi_323650955 hallmark;refseq 102;40;18;44 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus subtilis subsp. natto extrachromosomal linear Cluster_333 Bacilli_gi_325681573 hallmark;refseq 58;25;8;25 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus reuteri MM4-1A extrachromosomal linear Cluster_32 Bacilli_gi_325912757 hallmark;refseq 55;28;5;22 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus iners UPII 60-B extrachromosomal linear Cluster_334 Bacilli_gi_329115710-658321-693683 hallmark;refseq 56;32;3;21 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus parauberis NCFD 2020 prophage linear Cluster_30 Bacilli_gi_332522132-235929-273638 hallmark;refseq 59;36;5;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus porcinus str. Jelinkova 176 prophage linear Cluster_62 Bacilli_gi_335029684-0-26362 hallmark;refseq 39;33;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus infantis SK1076 prophage linear Cluster_31 Bacilli_gi_335038930 hallmark;refseq 19;10;4;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Caldalkalibacillus Caldalkalibacillus thermarum TA2.A1 extrachromosomal linear Cluster_135 Bacilli_gi_336232954-9022-28680 hallmark;refseq 19;11;;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus coryniformis subsp. torquens KCTC 3535 prophage linear Cluster_401 Bacilli_gi_336232955 hallmark;refseq 48;20;5;23 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus coryniformis subsp. torquens KCTC 3535 extrachromosomal linear Cluster_127 Bacilli_gi_336232957 hallmark;refseq 45;34;1;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus coryniformis subsp. torquens KCTC 3535 extrachromosomal linear Cluster_70 Bacilli_gi_336233546-739015-780180 hallmark;refseq 67;41;2;24 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Geobacillus Geobacillus thermoglucosidasius C56-YS93 prophage linear Cluster_20 Bacilli_gi_339302712 hallmark;refseq 57;28;5;24 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Leuconostocaceae;Leuconostoc Leuconostoc pseudomesenteroides KCTC 3652 extrachromosomal linear Cluster_32 Bacilli_gi_339434019 hallmark;refseq 27;14;1;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Leuconostocaceae;Fructobacillus Fructobacillus fructosus KCTC 3544 extrachromosomal linear Cluster_41 Bacilli_gi_339434028 hallmark;refseq 20;14;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Leuconostocaceae;Fructobacillus Fructobacillus fructosus KCTC 3544 extrachromosomal linear Cluster_41 Bacilli_gi_339434036 hallmark;refseq;vdb 19;11;2;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Leuconostocaceae;Fructobacillus Fructobacillus fructosus KCTC 3544 extrachromosomal linear Cluster_143 Bacilli_gi_354585674-8738-62189 hallmark 75;24;9;42 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Paenibacillaceae;Paenibacillus Paenibacillus lactis 154 prophage linear Cluster_105 Bacilli_gi_356908030 refseq 100;30;16;54 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Firmicutes;Bacilli;Bacillales;Paenibacillaceae;Paenibacillus Paenibacillus elgii B69 extrachromosomal linear Cluster_294 Bacilli_gi_356908039 refseq 73;21;5;47 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Spbetalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Paenibacillaceae;Paenibacillus Paenibacillus elgii B69 extrachromosomal linear Cluster_211 Bacilli_gi_356908088 hallmark 63;13;7;43 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Firmicutes;Bacilli;Bacillales;Paenibacillaceae;Paenibacillus Paenibacillus elgii B69 extrachromosomal linear Cluster_152 Bacilli_gi_356908153 hallmark 12;4;2;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Spbetalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Paenibacillaceae;Paenibacillus Paenibacillus elgii B69 extrachromosomal linear Cluster_526 Bacilli_gi_357238088-227639-250404 hallmark;refseq 29;21;2;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus ictaluri 707-05 prophage linear Cluster_20 Bacilli_gi_357238483-407714-430480 hallmark;refseq 35;24;4;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus ictaluri 707-05 prophage linear Cluster_17 Bacilli_gi_358052789-12117-19962 hallmark;refseq 10;9;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus simiae CCM 7213 prophage linear Cluster_143 Bacilli_gi_365164259 hallmark;refseq 95;41;17;37 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus sp. 7_6_55CFAA_CT2 extrachromosomal linear Cluster_186 Bacilli_gi_365822010 hallmark;refseq 23;13;3;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus suebicus KCTC 3549 extrachromosomal linear Cluster_32 Bacilli_gi_365822121 hallmark;refseq 22;14;4;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus mali KCTC 3596 = DSM 20444 extrachromosomal linear Cluster_32 Bacilli_gi_365822134 hallmark;refseq 24;21;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus mali KCTC 3596 = DSM 20444 extrachromosomal linear Cluster_289 Bacilli_gi_365822176 hallmark;refseq 18;14;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus mali KCTC 3596 = DSM 20444 extrachromosomal linear Cluster_52 Bacilli_gi_365822285 refseq 35;29;1;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus zeae KCTC 3804 extrachromosomal linear Cluster_133 Bacilli_gi_365822846 hallmark;refseq 50;28;1;21 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus acidipiscis KCTC 13900 extrachromosomal linear Cluster_127 Bacilli_gi_365854193 hallmark 19;6;1;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus parafarraginis F0439 extrachromosomal linear Cluster_8 Bacilli_gi_365854313 hallmark 16;7;2;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus parafarraginis F0439 extrachromosomal linear Cluster_95 Bacilli_gi_365854317 hallmark;refseq 82;32;19;31 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus parafarraginis F0439 extrachromosomal linear Cluster_32 Bacilli_gi_373466296-15209-60043 hallmark;refseq 60;30;4;26 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Phic3unalikevirus;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus kisonensis F0435 prophage linear Cluster_32 Bacilli_gi_374601708-0-104377 hallmark;refseq 86;35;22;29 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Paenibacillaceae;Paenibacillus Paenibacillus dendritiformis C454 prophage linear Cluster_489 Bacilli_gi_375287510 hallmark;refseq 81;67;4;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus cereus NC7401 extrachromosomal linear Cluster_116 Bacilli_gi_376270191 hallmark;refseq 81;32;20;29 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus cereus F837/76 extrachromosomal linear Cluster_268 Bacilli_gi_377556631 hallmark;refseq 41;28;3;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus gastricus PS3 extrachromosomal linear Cluster_41 Bacilli_gi_377556685 hallmark;refseq 56;32;4;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus gastricus PS3 extrachromosomal linear Cluster_32 Bacilli_gi_377832687 refseq 120;43;6;71 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus mucosae LM1 extrachromosomal linear Cluster_89 Bacilli_gi_379019812-1533336-1577575 hallmark;refseq 75;73;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus M013 prophage linear Cluster_8 Bacilli_gi_379704392-792400-832873 hallmark;refseq;vdb 59;39;4;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus infantarius subsp. infantarius CJ18 prophage linear Cluster_41 Bacilli_gi_381181969 hallmark;refseq 57;33;7;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Phic3unalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Listeriaceae;Listeria Listeria fleischmannii subsp. coloradonensis extrachromosomal linear Cluster_6 Bacilli_gi_383939350 hallmark;refseq 69;44;4;21 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pseudopneumoniae SK674 extrachromosomal circular Cluster_30 Bacilli_gi_384162404-855932-891120 hallmark;refseq 48;30;5;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus amyloliquefaciens LL3 prophage linear Cluster_6 Bacilli_gi_384177910-4724782-4761462 hallmark;refseq 54;42;3;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Phic3unalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus thuringiensis serovar finitimus YBT-020 prophage linear Cluster_269 Bacilli_gi_384183548 hallmark 73;24;12;37 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus thuringiensis serovar chinensis CT-43 extrachromosomal linear Cluster_150 Bacilli_gi_384546269-1107905-1148300 hallmark;refseq 67;63;1;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus ED133 prophage linear Cluster_8 Bacilli_gi_384548923-1513054-1559305 hallmark;refseq 67;64;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus JKD6159 prophage linear Cluster_6 Bacilli_gi_384860682-2119995-2157993 hallmark;refseq 57;53;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus str. JKD6008 prophage linear Cluster_40 Bacilli_gi_384865886-1745674-1793895 hallmark;refseq 64;62;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus TCH60 prophage linear Cluster_6 Bacilli_gi_385780298-1558909-1606496 hallmark;refseq 66;61;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus 11819-97 prophage linear Cluster_6 Bacilli_gi_385782956-887556-929686 hallmark;refseq 62;48;5;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus lugdunensis N920143 prophage linear Cluster_8 Bacilli_gi_385818534-1045559-1080296 hallmark;refseq 50;35;3;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus casei LC2W prophage linear Cluster_363 Bacilli_gi_385821700-1035449-1070186 hallmark;refseq 50;35;3;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus casei BD-II prophage linear Cluster_363 Bacilli_gi_385824947-839554-883014 hallmark;refseq 62;51;3;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus johnsonii DPC 6026 prophage linear Cluster_157 Bacilli_gi_385836969-622724-662135 hallmark;refseq 59;49;5;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Lactococcus Lactococcus lactis subsp. cremoris A76 prophage linear Cluster_159 Bacilli_gi_386006713-1224754-1268159 hallmark;refseq 69;56;4;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Listeriaceae;Listeria Listeria monocytogenes L99 prophage linear Cluster_412 Bacilli_gi_386025288-1222710-1266118 hallmark;refseq 69;57;4;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Listeriaceae;Listeria Listeria monocytogenes M7 prophage linear Cluster_412 Bacilli_gi_386045634-2359202-2401508 hallmark;refseq 68;50;10;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Listeriaceae;Listeria Listeria monocytogenes J0161 prophage linear Cluster_185 Bacilli_gi_386045634-2682391-2718615 hallmark;refseq;vdb 59;43;5;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Listeriaceae;Listeria Listeria monocytogenes J0161 prophage linear Cluster_94 Bacilli_gi_386361880-1133631-1157904 hallmark;refseq 37;35;1;1 Viruses;unclassified;unclassified;unclassified;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes Alab49 prophage linear Cluster_57 Bacilli_gi_386361880-967175-1012375 hallmark;refseq 65;48;7;10 Viruses;unclassified phages;;;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes Alab49 prophage linear Cluster_115 Bacilli_gi_387601291-1596549-1643210 hallmark;refseq 70;65;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus ST398 prophage linear Cluster_6 Bacilli_gi_387756560-23745-57287 hallmark;refseq;vdb 49;39;1;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae OXC141 prophage linear Cluster_31 Bacilli_gi_389853198-779839-819962 hallmark;refseq 61;49;4;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Lactococcus Lactococcus lactis subsp. cremoris NZ9000 prophage linear Cluster_195 Bacilli_gi_390630674 hallmark;refseq 76;33;4;39 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Leuconostocaceae;Weissella Weissella confusa LBAE C39-2 extrachromosomal linear Cluster_29 Bacilli_gi_390993670 hallmark;refseq 21;10;1;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Carnobacteriaceae;Carnobacterium Carnobacterium maltaromaticum ATCC 35586 extrachromosomal linear Cluster_55 Bacilli_gi_390993716-246-13916 hallmark;refseq 16;13;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Carnobacteriaceae;Carnobacterium Carnobacterium maltaromaticum ATCC 35586 prophage linear Cluster_15 Bacilli_gi_392971819-146829-199081 hallmark;refseq 64;33;5;26 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus equorum subsp. equorum Mu2 prophage linear Cluster_8 Bacilli_gi_395238799 hallmark;refseq 28;17;;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Phic3unalikevirus;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus gigeriorum CRBIP 24.85 extrachromosomal linear Cluster_141 Bacilli_gi_395239076 hallmark;refseq 59;33;3;23 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus gigeriorum CRBIP 24.85 extrachromosomal linear Cluster_32 Bacilli_gi_395244000-0-26030 hallmark;refseq 40;26;;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus hominis CRBIP 24.179 prophage linear Cluster_141 Bacilli_gi_397698583-257750-295157 hallmark;refseq 54;51;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis D32 prophage linear Cluster_17 Bacilli_gi_397738323 refseq 68;44;7;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Spbetalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus vallismortis DV1-F-3 extrachromosomal linear Cluster_253 Bacilli_gi_397738354 hallmark;refseq 76;32;18;26 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus vallismortis DV1-F-3 extrachromosomal linear Cluster_105 Bacilli_gi_397738363 refseq 41;31;2;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus vallismortis DV1-F-3 extrachromosomal linear Cluster_253 Bacilli_gi_397738376 refseq 50;36;3;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus vallismortis DV1-F-3 extrachromosomal linear Cluster_253 Bacilli_gi_399049503 refseq;vdb 18;4;3;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Paenibacillaceae;Brevibacillus Brevibacillus sp. CF112 extrachromosomal linear unclustered Bacilli_gi_399051981 hallmark;noncaudo 30;10;2;18 Viruses;dsDNA viruses no RNA stage;unknown;Tectiviridae;Tectivirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Paenibacillaceae;Brevibacillus Brevibacillus sp. CF112 extrachromosomal linear Cluster_125 Bacilli_gi_399053859 refseq 34;16;3;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Paenibacillaceae;Brevibacillus Brevibacillus sp. CF112 extrachromosomal linear Cluster_308 Bacilli_gi_399056144 hallmark 39;6;12;21 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Paenibacillaceae;Brevibacillus Brevibacillus sp. CF112 extrachromosomal linear Cluster_72 Bacilli_gi_399516719 hallmark;refseq 47;27;4;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Leuconostocaceae;Leuconostoc Leuconostoc pseudomesenteroides 4882 extrachromosomal linear Cluster_41 Bacilli_gi_399579775 refseq 13;7;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;T4likevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Sporolactobacillaceae;Sporolactobacillus Sporolactobacillus vineae DSM 21990 = SL153 extrachromosomal linear Cluster_564 Bacilli_gi_402297927-7125-46941 hallmark;refseq 55;24;9;22 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus alcalophilus ATCC 27647 prophage linear Cluster_67 Bacilli_gi_402558249-34571-69901 hallmark;refseq 55;23;7;25 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Punalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus thuringiensis HD-771 prophage linear Cluster_150 Bacilli_gi_402558574 hallmark;refseq 64;42;3;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus thuringiensis HD-771 extrachromosomal linear Cluster_186 Bacilli_gi_402558824-1373424-1415725 hallmark;refseq;vdb 60;39;10;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus thuringiensis HD-771 prophage linear Cluster_55 Bacilli_gi_402818618-33898-50880 hallmark;refseq 25;16;1;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Paenibacillaceae;Paenibacillus Paenibacillus alvei DSM 29 prophage linear Cluster_50 Bacilli_gi_402818618-58-33202 hallmark;refseq 59;27;4;28 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Paenibacillaceae;Paenibacillus Paenibacillus alvei DSM 29 prophage linear Cluster_30 Bacilli_gi_403048122 hallmark;refseq;vdb 51;13;21;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Paenibacillaceae;Paenibacillus Paenibacillus senegalensis JC66 extrachromosomal linear Cluster_15 Bacilli_gi_403048418 hallmark 13;2;3;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Planococcaceae;Kurthia Kurthia massiliensis extrachromosomal linear Cluster_333 Bacilli_gi_403048419 hallmark 16;2;2;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Planococcaceae;Kurthia Kurthia massiliensis extrachromosomal linear Cluster_333 Bacilli_gi_403048714 hallmark 17;6;1;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Planococcaceae;Kurthia Kurthia sp. JC8E extrachromosomal linear Cluster_138 Bacilli_gi_404282430-1244247-1287027 hallmark;refseq 69;48;4;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Listeriaceae;Listeria Listeria monocytogenes SLCC2372 prophage linear Cluster_162 Bacilli_gi_405756987-1244070-1286688 hallmark;refseq 67;47;3;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Listeriaceae;Listeria Listeria monocytogenes SLCC2479 prophage linear Cluster_162 Bacilli_gi_406578771 hallmark;refseq 14;10;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus sp. GMD6S extrachromosomal linear Cluster_20 Bacilli_gi_406580233 hallmark;refseq 31;18;8;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus sp. GMD4E extrachromosomal linear Cluster_90 Bacilli_gi_406584727 hallmark;refseq 31;18;8;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus sp. GMD2E extrachromosomal linear Cluster_90 Bacilli_gi_406588330 hallmark;refseq;vdb 45;24;10;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus sp. GMD1S extrachromosomal linear Cluster_20 Bacilli_gi_406589702 hallmark;refseq 24;16;4;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus sp. GMD1E extrachromosomal linear Cluster_90 Bacilli_gi_407708681 hallmark;refseq 75;27;6;42 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus thuringiensis MC28 extrachromosomal linear Cluster_150 Bacilli_gi_407979928 hallmark 46;13;3;30 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Spbetalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus sp. HYC-10 extrachromosomal linear Cluster_167 Bacilli_gi_407980662 refseq 41;16;5;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus sp. HYC-10 extrachromosomal linear Cluster_105 Bacilli_gi_407980902 hallmark;refseq 17;10;7; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus sp. HYC-10 extrachromosomal linear Cluster_105 Bacilli_gi_407980970 hallmark 21;6;8;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus sp. HYC-10 extrachromosomal linear Cluster_105 Bacilli_gi_407981060 hallmark 18;9;7;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus sp. HYC-10 extrachromosomal linear Cluster_105 Bacilli_gi_408784815 hallmark;refseq 45;21;7;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Aerococcaceae;Facklamia Facklamia ignava CCUG 37419 extrachromosomal linear Cluster_20 Bacilli_gi_409913960-1385758-1426006 hallmark;refseq 51;46;;5 Viruses;unclassified;unclassified;unclassified;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes A20 prophage linear Cluster_70 Bacilli_gi_409913960-982600-1020388 hallmark;refseq 60;50;4;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes A20 prophage linear Cluster_196 Bacilli_gi_409995665-1041799-1076533 hallmark;refseq 50;35;3;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus casei W56 prophage linear Cluster_363 Bacilli_gi_410475457-24324-60929 hallmark;refseq 60;47;4;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae gamPNI0373 prophage linear Cluster_31 Bacilli_gi_411107839 hallmark;refseq 69;36;11;22 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Lactococcus Lactococcus raffinolactis 4877 extrachromosomal linear Cluster_41 Bacilli_gi_415687370-0-41667 hallmark;refseq 56;53;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus CGS01 prophage linear Cluster_6 Bacilli_gi_415694657 hallmark;refseq 35;32;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus CGS03 extrachromosomal linear Cluster_6 Bacilli_gi_415694867 refseq 26;24;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus CGS03 extrachromosomal linear Cluster_6 Bacilli_gi_415699875 hallmark;refseq 53;51;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae 459-5 extrachromosomal linear Cluster_52 Bacilli_gi_415890624 hallmark;refseq 22;19;;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecium E4453 extrachromosomal linear Cluster_41 Bacilli_gi_415891593 hallmark;refseq 22;16;1;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecium E4453 extrachromosomal linear Cluster_119 Bacilli_gi_416127188 hallmark;refseq 29;22;;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus epidermidis FRI909 extrachromosomal linear Cluster_6 Bacilli_gi_416143743 hallmark;refseq 59;32;6;21 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecium E4452 extrachromosomal linear Cluster_41 Bacilli_gi_416841886-0-27167 hallmark;refseq 33;33;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus O11 prophage linear Cluster_56 Bacilli_gi_416847937 hallmark;refseq 40;39;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus O46 extrachromosomal linear Cluster_49 Bacilli_gi_416848126 hallmark;refseq 46;45;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus O46 extrachromosomal linear Cluster_8 Bacilli_gi_417090946 hallmark;refseq 62;36;6;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus suis R61 extrachromosomal linear Cluster_50 Bacilli_gi_417646485-34936-72606 hallmark;refseq 56;49;2;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus epidermidis VCU144 prophage linear Cluster_8 Bacilli_gi_417648795 hallmark;refseq 20;19;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus 21189 extrachromosomal linear Cluster_6 Bacilli_gi_417650146 refseq 25;23;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus 21189 extrachromosomal linear Cluster_6 Bacilli_gi_417650690 hallmark;refseq 66;63;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus 21172 extrachromosomal linear Cluster_40 Bacilli_gi_417654534 hallmark;refseq 68;64;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus 21193 extrachromosomal linear Cluster_6 Bacilli_gi_417656941 hallmark;refseq 40;37;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus epidermidis VCU028 extrachromosomal linear Cluster_8 Bacilli_gi_417659246 hallmark;refseq 73;64;4;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus epidermidis VCU045 extrachromosomal linear Cluster_8 Bacilli_gi_417695265 refseq 22;15;3;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae GA47368 extrachromosomal linear Cluster_30 Bacilli_gi_417751809 hallmark;refseq 20;13;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus dysgalactiae subsp. equisimilis SK1249 extrachromosomal linear Cluster_20 Bacilli_gi_417751967 hallmark;refseq 27;25;1;1 Viruses;unclassified;unclassified;unclassified;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus dysgalactiae subsp. equisimilis SK1249 extrachromosomal linear Cluster_68 Bacilli_gi_417752159-1026-28537 hallmark;refseq 38;32;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus dysgalactiae subsp. equisimilis SK1249 prophage linear Cluster_17 Bacilli_gi_417752720 hallmark;refseq 46;30;1;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus dysgalactiae subsp. equisimilis SK1249 extrachromosomal linear Cluster_30 Bacilli_gi_417753211-9810-41935 hallmark;refseq 50;43;2;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus dysgalactiae subsp. equisimilis SK1249 prophage linear Cluster_52 Bacilli_gi_417797297-90004-137007 hallmark;refseq 67;65;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus 21305 prophage linear Cluster_6 Bacilli_gi_417798346 hallmark;refseq 32;31;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus 21310 extrachromosomal linear Cluster_35 Bacilli_gi_417798378 hallmark;refseq 22;21;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus 21310 extrachromosomal linear Cluster_56 Bacilli_gi_417798765 hallmark;refseq 36;34;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus 21310 extrachromosomal linear Cluster_40 Bacilli_gi_417855870-1158916-1200081 hallmark;refseq 58;43;7;8 Viruses;unclassified;unclassified;unclassified;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes HKU QMH11M0907901 prophage linear Cluster_115 Bacilli_gi_417855870-489312-530530 hallmark;refseq 52;46;1;5 Viruses;unclassified;unclassified;unclassified;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes HKU QMH11M0907901 prophage linear Cluster_70 Bacilli_gi_417888570 hallmark;refseq 21;21;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus 21195 extrachromosomal linear Cluster_40 Bacilli_gi_417889221 hallmark;refseq 19;19;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus 21195 extrachromosomal linear Cluster_56 Bacilli_gi_417889241 hallmark;refseq 31;31;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus 21195 extrachromosomal linear Cluster_49 Bacilli_gi_417894173-0-39497 hallmark;refseq 59;55;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus 21201 prophage linear Cluster_8 Bacilli_gi_417894420-150-38144 hallmark;refseq 65;60;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus 21201 prophage linear Cluster_8 Bacilli_gi_417896179 hallmark;refseq 17;17;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus 21235 extrachromosomal linear Cluster_40 Bacilli_gi_417896295 hallmark;refseq 57;55;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus 21235 extrachromosomal linear Cluster_8 Bacilli_gi_417897394 refseq 36;31;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus 21235 extrachromosomal linear Cluster_8 Bacilli_gi_417904279 hallmark;refseq 36;36;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus 21269 extrachromosomal linear Cluster_49 Bacilli_gi_417906544 hallmark;refseq 51;46;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus capitis VCU116 extrachromosomal linear Cluster_40 Bacilli_gi_417935460-55324-90986 hallmark;refseq 55;36;3;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus infantis X prophage linear Cluster_50 Bacilli_gi_417939277-5553-40816 hallmark;refseq 55;39;4;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;C2likevirus;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus infantis SK970 prophage linear Cluster_166 Bacilli_gi_417972469-10649-37669 hallmark;refseq 41;31;1;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus ruminis ATCC 25644 prophage linear Cluster_57 Bacilli_gi_417973945-7683-39121 hallmark;refseq 39;26;2;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus ruminis ATCC 25644 prophage linear Cluster_399 Bacilli_gi_417985231 hallmark;refseq 48;39;;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus casei 21/1 extrachromosomal linear Cluster_30 Bacilli_gi_417986406-23033-40274 refseq 36;20;4;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus casei 32G prophage linear Cluster_96 Bacilli_gi_417986451 hallmark;refseq 23;19;;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus casei 32G extrachromosomal linear Cluster_30 Bacilli_gi_417987164 hallmark;refseq 21;19;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus casei 32G extrachromosomal linear Cluster_96 Bacilli_gi_417987185 refseq 39;26;3;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Phic3unalikevirus;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus casei 32G extrachromosomal linear Cluster_133 Bacilli_gi_417989998-17497-39738 hallmark;refseq 23;17;;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus casei A2-362 prophage linear Cluster_32 Bacilli_gi_417991325 hallmark;refseq 22;15;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus casei A2-362 extrachromosomal linear Cluster_96 Bacilli_gi_417991437 hallmark;refseq 20;18;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus casei A2-362 extrachromosomal linear Cluster_161 Bacilli_gi_417991492 refseq 28;14;3;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus casei A2-362 extrachromosomal linear Cluster_133 Bacilli_gi_417991541 hallmark;refseq 23;19;;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus casei A2-362 extrachromosomal linear Cluster_30 Bacilli_gi_417991583 hallmark;refseq 17;15;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus casei A2-362 extrachromosomal linear Cluster_41 Bacilli_gi_417991622 refseq 29;12;3;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus casei A2-362 extrachromosomal linear Cluster_96 Bacilli_gi_417995207 refseq 30;15;3;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus casei M36 extrachromosomal linear Cluster_420 Bacilli_gi_418001443 refseq 30;21;1;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Phic3unalikevirus;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus casei UCD174 extrachromosomal linear Cluster_133 Bacilli_gi_418002585 hallmark;refseq 25;21;;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus casei UCD174 extrachromosomal linear Cluster_161 Bacilli_gi_418002624 hallmark;refseq 26;19;3;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus casei UCD174 extrachromosomal linear Cluster_41 Bacilli_gi_418002652 hallmark;refseq 24;19;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus casei UCD174 extrachromosomal linear Cluster_133 Bacilli_gi_418002674 hallmark;refseq 37;35;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus casei UCD174 extrachromosomal linear Cluster_127 Bacilli_gi_418002709 refseq 21;14;2;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus casei UCD174 extrachromosomal linear Cluster_96 Bacilli_gi_418004195 refseq 24;15;4;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus casei UW1 extrachromosomal linear Cluster_420 Bacilli_gi_418037156 hallmark;refseq 31;25;1;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Lactococcus Lactococcus lactis subsp. lactis CNCM I-1631 extrachromosomal linear Cluster_57 Bacilli_gi_418038308 hallmark;refseq 25;16;6;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Lactococcus Lactococcus lactis subsp. lactis CNCM I-1631 extrachromosomal linear Cluster_356 Bacilli_gi_418038770 hallmark;refseq 17;17;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Lactococcus Lactococcus lactis subsp. lactis CNCM I-1631 extrachromosomal linear Cluster_159 Bacilli_gi_418069249 hallmark;refseq 53;31;3;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Pediococcus Pediococcus acidilactici MA18/5M extrachromosomal linear Cluster_32 Bacilli_gi_418072737 hallmark;refseq 54;42;1;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus rhamnosus R0011 extrachromosomal linear Cluster_96 Bacilli_gi_418072794 hallmark;refseq 49;42;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus rhamnosus R0011 extrachromosomal linear Cluster_133 Bacilli_gi_418075088 hallmark;refseq 53;38;2;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae GA47502 extrachromosomal linear Cluster_31 Bacilli_gi_418076765-0-17856 hallmark;refseq;vdb 30;28;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae GA47502 prophage linear Cluster_52 Bacilli_gi_418095085 refseq 23;22;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae GA16531 extrachromosomal linear Cluster_30 Bacilli_gi_418104056 hallmark;refseq 27;17;3;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae GA44500 extrachromosomal linear Cluster_50 Bacilli_gi_418105572-57782-95647 hallmark;refseq 51;50;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;C2likevirus;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae GA44500 prophage linear Cluster_52 Bacilli_gi_418106402 hallmark;refseq 59;37;5;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae GA41410 extrachromosomal linear Cluster_30 Bacilli_gi_418108933 hallmark;refseq 43;28;6;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae GA49447 extrachromosomal linear Cluster_30 Bacilli_gi_418134205 hallmark;refseq 46;31;4;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae GA11426 extrachromosomal linear Cluster_30 Bacilli_gi_418135618-0-34890 hallmark;refseq 58;35;3;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae GA11426 prophage linear Cluster_50 Bacilli_gi_418143142 hallmark;refseq 60;44;7;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae GA13494 extrachromosomal linear Cluster_31 Bacilli_gi_418154042 refseq 31;19;2;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae GA16242 extrachromosomal linear Cluster_52 Bacilli_gi_418161016 hallmark;refseq 48;29;5;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae GA17328 extrachromosomal linear Cluster_30 Bacilli_gi_418165586 refseq 31;20;5;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae GA17971 extrachromosomal linear Cluster_31 Bacilli_gi_418173798-108723-146533 hallmark;refseq 51;49;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;C2likevirus;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae GA41277 prophage linear Cluster_52 Bacilli_gi_418174697 hallmark;refseq 53;39;3;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae GA41277 extrachromosomal linear Cluster_30 Bacilli_gi_418174774-9159-49660 hallmark;refseq 63;40;10;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae GA41437 prophage linear Cluster_30 Bacilli_gi_418203509 hallmark 19;6;3;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae GA52306 extrachromosomal linear Cluster_469 Bacilli_gi_418217724 hallmark;refseq 42;28;5;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae NP127 extrachromosomal linear Cluster_30 Bacilli_gi_418220022 hallmark;refseq 50;37;4;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae GA47751 extrachromosomal linear Cluster_30 Bacilli_gi_418230837-0-22658 hallmark;refseq 45;27;3;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae EU-NP01 prophage linear Cluster_50 Bacilli_gi_418237552 hallmark;refseq 44;28;5;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae NorthCarolina6A-23 extrachromosomal linear Cluster_30 Bacilli_gi_418278709 refseq 8;5;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;T4likevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus 21178 extrachromosomal linear Cluster_541 Bacilli_gi_418278758 hallmark;refseq 29;29;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus 21178 extrachromosomal linear Cluster_49 Bacilli_gi_418279219 hallmark;refseq 23;21;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus 21178 extrachromosomal linear Cluster_6 Bacilli_gi_418280714 hallmark;refseq 23;23;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus 21178 extrachromosomal linear Cluster_40 Bacilli_gi_418281068 refseq 59;17;5;37 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus 21178 extrachromosomal linear Cluster_194 Bacilli_gi_418281204 refseq 29;26;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus 21178 extrachromosomal linear Cluster_8 Bacilli_gi_418282152 hallmark;refseq 29;28;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus 21202 extrachromosomal linear Cluster_35 Bacilli_gi_418283812 hallmark;refseq 17;17;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus 21202 extrachromosomal linear Cluster_56 Bacilli_gi_418284202 hallmark;refseq 16;16;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus 21202 extrachromosomal linear Cluster_40 Bacilli_gi_418284443-85920-116656 hallmark;refseq 35;33;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus 21209 prophage linear Cluster_6 Bacilli_gi_418286208 refseq 27;23;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus 21209 extrachromosomal linear Cluster_8 Bacilli_gi_418312897 hallmark;refseq 41;41;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus 21334 extrachromosomal linear Cluster_40 Bacilli_gi_418313262 hallmark;refseq 36;36;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus 21334 extrachromosomal linear Cluster_49 Bacilli_gi_418314622 hallmark;refseq 57;54;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus 21340 extrachromosomal linear Cluster_6 Bacilli_gi_418315920 refseq 26;26;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus 21340 extrachromosomal linear Cluster_8 Bacilli_gi_418315944-0-28648 hallmark;refseq 36;35;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus 21340 prophage linear Cluster_49 Bacilli_gi_418326388-36596-77815 hallmark;refseq 64;51;3;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus epidermidis VCU071 prophage linear Cluster_8 Bacilli_gi_418329359 hallmark;refseq 23;21;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus epidermidis 14.1.R1.SE extrachromosomal linear Cluster_35 Bacilli_gi_418424020 hallmark;refseq 16;16;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus VRS1 extrachromosomal linear Cluster_35 Bacilli_gi_418425168 refseq 22;17;5; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus VRS1 extrachromosomal linear Cluster_223 Bacilli_gi_418425926 hallmark;refseq 35;31;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus VRS1 extrachromosomal linear Cluster_6 Bacilli_gi_418427071 hallmark;refseq 38;37;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus VRS2 extrachromosomal linear Cluster_6 Bacilli_gi_418427219-0-30545 hallmark;refseq 39;38;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus VRS2 prophage linear Cluster_35 Bacilli_gi_418428885 refseq 29;23;6; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus VRS2 extrachromosomal linear Cluster_6 Bacilli_gi_418432823 hallmark;refseq 25;25;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus VRS4 extrachromosomal linear Cluster_35 Bacilli_gi_418436451-28044-46423 hallmark;refseq 40;39;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus VRS5 prophage linear Cluster_8 Bacilli_gi_418437598 refseq 29;27;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus VRS5 extrachromosomal linear Cluster_6 Bacilli_gi_418438411 hallmark;refseq 37;36;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus VRS5 extrachromosomal linear Cluster_6 Bacilli_gi_418439375-9892-16676 refseq;vdb 9;8;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus VRS6 prophage linear Cluster_8 Bacilli_gi_418439975 hallmark;refseq 36;33;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus VRS6 extrachromosomal linear Cluster_6 Bacilli_gi_418442364 hallmark;refseq 37;36;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus VRS7 extrachromosomal linear Cluster_8 Bacilli_gi_418442426 refseq 13;12;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus VRS7 extrachromosomal linear Cluster_35 Bacilli_gi_418443471 hallmark;refseq 36;34;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus VRS7 extrachromosomal linear Cluster_40 Bacilli_gi_418444227 hallmark;refseq 38;36;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus VRS7 extrachromosomal linear Cluster_6 Bacilli_gi_418444355 refseq 11;11;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus VRS7 extrachromosomal linear Cluster_35 Bacilli_gi_418444369 refseq 26;24;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus VRS7 extrachromosomal linear Cluster_6 Bacilli_gi_418447255 hallmark;refseq 44;41;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus VRS8 extrachromosomal linear Cluster_8 Bacilli_gi_418447301 hallmark;refseq 34;32;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus VRS8 extrachromosomal linear Cluster_6 Bacilli_gi_418447335 hallmark;refseq 36;33;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus VRS8 extrachromosomal linear Cluster_8 Bacilli_gi_418447372 hallmark;refseq 31;31;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus VRS8 extrachromosomal linear Cluster_40 Bacilli_gi_418449033 hallmark;refseq 72;63;7;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus VRS9 extrachromosomal linear Cluster_6 Bacilli_gi_418451522-387519-433306 hallmark;refseq 68;64;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus VRS10 prophage linear Cluster_6 Bacilli_gi_418453252 hallmark;refseq 25;24;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus VRS10 extrachromosomal linear Cluster_49 Bacilli_gi_418454265-6091-48807 hallmark;refseq 63;61;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus VRS11a prophage linear Cluster_8 Bacilli_gi_418456138 hallmark;refseq 49;46;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus VRS11a extrachromosomal linear Cluster_6 Bacilli_gi_418456274 refseq 12;12;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus VRS11a extrachromosomal linear Cluster_6 Bacilli_gi_418457141-6089-48805 hallmark;refseq 63;61;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus VRS11b prophage linear Cluster_8 Bacilli_gi_418459014 hallmark;refseq 61;57;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus VRS11b extrachromosomal linear Cluster_6 Bacilli_gi_418558834-21519-67828 hallmark;refseq 69;65;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus 21252 prophage linear Cluster_6 Bacilli_gi_418562342-90474-138012 hallmark;refseq 65;62;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus 21262 prophage linear Cluster_6 Bacilli_gi_418564521-0-42382 hallmark;refseq 60;54;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus 21264 prophage linear Cluster_6 Bacilli_gi_418566521 hallmark;refseq 63;56;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus 21264 extrachromosomal linear Cluster_40 Bacilli_gi_418568452-178206-212060 hallmark;refseq 41;40;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus 21272 prophage linear Cluster_6 Bacilli_gi_418569179-107310-136745 hallmark;refseq 40;40;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus 21272 prophage linear Cluster_49 Bacilli_gi_418569702 refseq 27;16;8;3 Viruses;dsDNA viruses no RNA stage;unclassified;unclassified;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus 21283 extrachromosomal linear Cluster_254 Bacilli_gi_418569780 hallmark;refseq 21;21;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus 21283 extrachromosomal linear Cluster_49 Bacilli_gi_418571191 hallmark;refseq 22;21;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus 21283 extrachromosomal linear Cluster_35 Bacilli_gi_418571259 hallmark;refseq 30;30;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus 21283 extrachromosomal linear Cluster_40 Bacilli_gi_418572921 hallmark;refseq 62;56;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus 21333 extrachromosomal linear Cluster_6 Bacilli_gi_418574723-1492-41667 hallmark;refseq 58;53;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus 21333 prophage linear Cluster_56 Bacilli_gi_418578406-1011714-1056771 hallmark;refseq 67;64;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus CIG1114 prophage linear Cluster_6 Bacilli_gi_418581925-0-28052 hallmark;refseq 34;33;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus CIG1605 prophage linear Cluster_35 Bacilli_gi_418581925-470970-518224 hallmark;refseq 68;64;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus CIG1605 prophage linear Cluster_6 Bacilli_gi_418595755 hallmark;refseq 29;29;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus 21342 extrachromosomal linear Cluster_49 Bacilli_gi_418595872 refseq 31;29;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus 21342 extrachromosomal linear Cluster_8 Bacilli_gi_418595951 refseq 27;23;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus 21342 extrachromosomal linear Cluster_8 Bacilli_gi_418596659 hallmark;refseq 36;33;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus 21342 extrachromosomal linear Cluster_40 Bacilli_gi_418597930 hallmark;refseq 22;22;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus 21343 extrachromosomal linear Cluster_49 Bacilli_gi_418598785-0-32717 hallmark;refseq 60;56;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus 21343 prophage linear Cluster_8 Bacilli_gi_418598920-1492-28407 hallmark;refseq 34;32;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus 21343 prophage linear Cluster_40 Bacilli_gi_418602195 hallmark;refseq 59;55;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus 21345 extrachromosomal linear Cluster_8 Bacilli_gi_418603245 hallmark;refseq 46;43;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus 21345 extrachromosomal linear Cluster_40 Bacilli_gi_418604393-14973-50087 hallmark;refseq 47;24;3;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus epidermidis VCU041 prophage linear Cluster_257 Bacilli_gi_418610180 hallmark;refseq 68;55;6;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus epidermidis VCU065 extrachromosomal linear Cluster_8 Bacilli_gi_418613544 hallmark;refseq 64;57;3;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus epidermidis VCU118 extrachromosomal linear Cluster_8 Bacilli_gi_418613735-8867-46749 hallmark;refseq 47;24;3;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus epidermidis VCU118 prophage linear Cluster_257 Bacilli_gi_418621305 hallmark;refseq 66;53;6;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus epidermidis VCU123 extrachromosomal linear Cluster_6 Bacilli_gi_418638786 hallmark;refseq 33;33;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus IS-3 extrachromosomal linear Cluster_40 Bacilli_gi_418641661-86743-133361 hallmark;refseq 70;66;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus IS-24 prophage linear Cluster_6 Bacilli_gi_418643491 hallmark;refseq 120;80;35;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus IS-55 extrachromosomal linear Cluster_56 Bacilli_gi_418646258 hallmark;refseq 71;60;7;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus IS-88 extrachromosomal linear Cluster_40 Bacilli_gi_418646970 hallmark;refseq 42;39;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus IS-88 extrachromosomal linear Cluster_6 Bacilli_gi_418648883 hallmark;refseq 29;26;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus IS-88 extrachromosomal linear Cluster_6 Bacilli_gi_418650355-102333-148584 hallmark;refseq 68;65;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus IS-91 prophage linear Cluster_6 Bacilli_gi_418653784 refseq 16;16;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus IS-99 extrachromosomal linear Cluster_35 Bacilli_gi_418655351 hallmark;refseq 36;35;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus IS-105 extrachromosomal linear Cluster_8 Bacilli_gi_418655824 hallmark;refseq 38;36;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus IS-105 extrachromosomal linear Cluster_40 Bacilli_gi_418656049 hallmark;refseq 12;12;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus IS-105 extrachromosomal linear Cluster_56 Bacilli_gi_418658992-19-19168 refseq 36;34;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus IS-111 prophage linear Cluster_6 Bacilli_gi_418659253 hallmark;refseq 45;35;7;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus IS-111 extrachromosomal linear Cluster_35 Bacilli_gi_418660152 hallmark;refseq 28;27;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus IS-111 extrachromosomal linear Cluster_6 Bacilli_gi_418660466 hallmark;refseq 23;23;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus IS-111 extrachromosomal linear Cluster_40 Bacilli_gi_418663301-72717-96992 hallmark;refseq 41;38;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus IS-122 prophage linear Cluster_6 Bacilli_gi_418870895 hallmark;refseq 22;21;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus IS-125 extrachromosomal linear Cluster_56 Bacilli_gi_418870917 hallmark;refseq 35;34;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus IS-125 extrachromosomal linear Cluster_35 Bacilli_gi_418871717 hallmark;refseq 20;19;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus IS-125 extrachromosomal linear Cluster_56 Bacilli_gi_418871954 refseq 28;14;6;8 Viruses;dsDNA viruses no RNA stage;unknown;unknown;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus IS-125 extrachromosomal linear Cluster_254 Bacilli_gi_418872635 hallmark;refseq 42;40;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus IS-125 extrachromosomal linear Cluster_40 Bacilli_gi_418877365-324549-360575 hallmark;refseq 60;59;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus CIG1165 prophage linear Cluster_8 Bacilli_gi_418877725 hallmark;refseq 19;19;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus CIG1165 extrachromosomal linear Cluster_35 Bacilli_gi_418877970-427303-474658 hallmark;refseq 75;69;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus CIG1165 prophage linear Cluster_6 Bacilli_gi_418879131 hallmark;refseq 35;30;5; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus CIG1165 extrachromosomal linear Cluster_8 Bacilli_gi_418879198 refseq 39;33;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus CIG1213 extrachromosomal linear Cluster_6 Bacilli_gi_418879237-0-36335 hallmark;refseq 60;56;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus CIG1213 prophage linear Cluster_6 Bacilli_gi_418881987-0-66145 hallmark;refseq 100;92;8; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus CIG1769 prophage linear Cluster_6 Bacilli_gi_418891704 hallmark;refseq 49;43;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus CIG1176 extrachromosomal linear Cluster_8 Bacilli_gi_418891978-215212-262466 hallmark;refseq 68;64;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus CIG1176 prophage linear Cluster_6 Bacilli_gi_418892898 refseq 48;34;12;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus CIG1176 extrachromosomal linear Cluster_223 Bacilli_gi_418893975-328443-364711 hallmark;refseq 63;61;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus CIG1057 prophage linear Cluster_8 Bacilli_gi_418894347 hallmark;refseq 19;18;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus CIG1057 extrachromosomal linear Cluster_35 Bacilli_gi_418894720-0-22965 hallmark;refseq 26;26;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus CIG1057 prophage linear Cluster_35 Bacilli_gi_418894892-351648-397765 hallmark;refseq 71;66;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus CIG1057 prophage linear Cluster_6 Bacilli_gi_418897457 refseq 27;24;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus CIGC341D extrachromosomal linear Cluster_8 Bacilli_gi_418897538-553874-601128 hallmark;refseq 68;64;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus CIGC341D prophage linear Cluster_6 Bacilli_gi_418899734 refseq 39;30;8;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus CIG1214 extrachromosomal linear Cluster_223 Bacilli_gi_418900471-0-40889 hallmark;refseq 65;60;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus CIG1214 prophage linear Cluster_8 Bacilli_gi_418900929-0-44215 hallmark;refseq 65;61;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus CIG1214 prophage linear Cluster_6 Bacilli_gi_418901405 hallmark;refseq 43;41;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus CIG1214 extrachromosomal linear Cluster_35 Bacilli_gi_418902777-1012535-1057592 hallmark;refseq 66;63;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus CIG1770 prophage linear Cluster_6 Bacilli_gi_418908158-17497-52198 hallmark;refseq 54;51;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus CIG149 prophage linear Cluster_40 Bacilli_gi_418910738-210568-255154 hallmark;refseq 67;62;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus CIG547 prophage linear Cluster_6 Bacilli_gi_418916784-587452-634706 hallmark;refseq 68;64;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus CIG1267 prophage linear Cluster_6 Bacilli_gi_418917818-126423-196354 hallmark;refseq 98;83;11;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus CIG1267 prophage linear Cluster_223 Bacilli_gi_418918827-312809-356609 hallmark;refseq 61;57;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus CIGC348 prophage linear Cluster_6 Bacilli_gi_418922961-181243-228496 hallmark;refseq 70;66;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus CIG1233 prophage linear Cluster_6 Bacilli_gi_418926576 hallmark;refseq 42;38;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus CIG2018 extrachromosomal linear Cluster_6 Bacilli_gi_418926619 refseq 28;25;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus CIG2018 extrachromosomal linear Cluster_6 Bacilli_gi_418927831-1013269-1058328 hallmark;refseq 67;64;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus CIG1612 prophage linear Cluster_6 Bacilli_gi_418930544-330492-349212 hallmark;refseq 42;41;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus CIG1750 prophage linear Cluster_8 Bacilli_gi_418931127-754-10388 hallmark;refseq 23;20;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus CIG1750 prophage linear Cluster_8 Bacilli_gi_418931725 hallmark;refseq 36;31;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus CIG1750 extrachromosomal linear Cluster_6 Bacilli_gi_418933447-548605-592002 hallmark;refseq 68;63;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus CIGC128 prophage linear Cluster_8 Bacilli_gi_418934214-220028-266180 hallmark;refseq 67;64;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus CIGC128 prophage linear Cluster_6 Bacilli_gi_418946888 hallmark;refseq 41;39;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus IS-157 extrachromosomal linear Cluster_40 Bacilli_gi_418947426 hallmark;refseq 18;17;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus IS-157 extrachromosomal linear Cluster_56 Bacilli_gi_418949194-44861-72515 hallmark;refseq 32;32;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus IS-157 prophage linear Cluster_35 Bacilli_gi_418950604 hallmark;refseq 44;43;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus IS-160 extrachromosomal linear Cluster_40 Bacilli_gi_418953429-35776-64130 hallmark;refseq 36;35;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus IS-189 prophage linear Cluster_35 Bacilli_gi_418954000 refseq 61;17;7;37 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus IS-189 extrachromosomal linear Cluster_194 Bacilli_gi_418954259 hallmark;refseq 22;21;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus IS-189 extrachromosomal linear Cluster_56 Bacilli_gi_418954614 hallmark;refseq 44;41;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus IS-189 extrachromosomal linear Cluster_40 Bacilli_gi_418964126 hallmark;refseq 19;12;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus anginosus subsp. whileyi CCUG 39159 extrachromosomal linear Cluster_20 Bacilli_gi_418972756 hallmark;refseq 30;24;1;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pseudopneumoniae ATCC BAA-960 extrachromosomal linear Cluster_30 Bacilli_gi_418973915 hallmark;refseq 30;21;4;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pseudopneumoniae ATCC BAA-960 extrachromosomal linear Cluster_50 Bacilli_gi_418978086-86937-134553 hallmark;refseq 66;64;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus DR10 prophage linear Cluster_6 Bacilli_gi_418982038-444418-491672 hallmark;refseq 68;64;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus CIG1242 prophage linear Cluster_6 Bacilli_gi_418983774-105903-125738 hallmark;refseq 23;23;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus CIG1500 prophage linear Cluster_49 Bacilli_gi_418985638-0-42458 hallmark;refseq 71;64;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus CIG1500 prophage linear Cluster_8 Bacilli_gi_418985638-486624-529999 hallmark;refseq 64;60;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus CIG1500 prophage linear Cluster_6 Bacilli_gi_418988425-98510-144543 hallmark;refseq 65;62;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus CIG1835 prophage linear Cluster_6 Bacilli_gi_418990410-1012793-1058714 hallmark;refseq 68;63;5; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus CIG1096 prophage linear Cluster_6 Bacilli_gi_418993954-235323-279724 hallmark;refseq 63;58;5; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus CIG290 prophage linear Cluster_6 Bacilli_gi_419433482-306698-344906 hallmark;refseq 52;51;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae GA40183 prophage linear Cluster_52 Bacilli_gi_419452187-8514-43604 hallmark;refseq 54;43;4;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae EU-NP03 prophage linear Cluster_31 Bacilli_gi_419456576 refseq 22;13;4;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae GA02254 extrachromosomal linear Cluster_31 Bacilli_gi_419458823 hallmark;refseq 52;36;6;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae GA02270 extrachromosomal linear Cluster_30 Bacilli_gi_419461106 hallmark;refseq 43;28;5;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae GA02714 extrachromosomal linear Cluster_30 Bacilli_gi_419464821-108742-146749 hallmark;refseq 51;50;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;C2likevirus;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae GA04175 prophage linear Cluster_52 Bacilli_gi_419467498-0-26468 hallmark;refseq 45;38;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae GA05248 prophage linear Cluster_31 Bacilli_gi_419476384-0-21347 hallmark;refseq;vdb 40;26;2;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae GA14688 prophage linear Cluster_50 Bacilli_gi_419476656 hallmark;refseq 21;13;2;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae GA14688 extrachromosomal linear Cluster_50 Bacilli_gi_419491786 hallmark;refseq 24;16;2;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae GA47179 extrachromosomal linear Cluster_30 Bacilli_gi_419511444 hallmark;refseq 14;13;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae GA05578 extrachromosomal linear Cluster_31 Bacilli_gi_419511460 refseq 16;10;1;5 Viruses;unclassified;unclassified;unclassified;unclassified;unclassified Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae GA05578 extrachromosomal linear Cluster_31 Bacilli_gi_419524742 hallmark;refseq 42;28;5;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae GA14373 extrachromosomal linear Cluster_30 Bacilli_gi_419757567 hallmark;refseq 54;24;8;22 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Leuconostocaceae;Oenococcus Oenococcus oeni AWRIB304 extrachromosomal circular Cluster_32 Bacilli_gi_419759047 refseq 19;12;;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Leuconostocaceae;Oenococcus Oenococcus oeni AWRIB304 extrachromosomal linear Cluster_32 Bacilli_gi_419759068 hallmark;refseq 11;6;;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Leuconostocaceae;Oenococcus Oenococcus oeni AWRIB304 extrachromosomal linear Cluster_32 Bacilli_gi_419759083 hallmark;refseq 19;11;4;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Leuconostocaceae;Oenococcus Oenococcus oeni AWRIB304 extrachromosomal linear Cluster_32 Bacilli_gi_419767764 hallmark;refseq 23;18;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus mitis SK579 extrachromosomal linear Cluster_143 Bacilli_gi_419767788 hallmark 19;8;5;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus mitis SK579 extrachromosomal linear Cluster_52 Bacilli_gi_419768752 hallmark;refseq 67;60;3;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus epidermidis IS-250 extrachromosomal linear Cluster_8 Bacilli_gi_419774929 hallmark;refseq 54;49;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus CO-23 extrachromosomal linear Cluster_40 Bacilli_gi_419775070 hallmark;refseq 49;47;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus CO-23 extrachromosomal linear Cluster_6 Bacilli_gi_419785735 hallmark;refseq 38;36;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus IS-M extrachromosomal linear Cluster_6 Bacilli_gi_419786064 refseq 35;29;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus IS-M extrachromosomal linear Cluster_6 Bacilli_gi_419786154 hallmark;refseq 33;32;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus IS-M extrachromosomal linear Cluster_40 Bacilli_gi_419800480-51741-91277 hallmark;refseq 55;39;1;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus parasanguinis F0449 prophage linear Cluster_88 Bacilli_gi_419815797-18564-51428 hallmark;refseq 34;23;3;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus sp. GMD2S prophage linear Cluster_20 Bacilli_gi_419819195-18643-51507 hallmark;refseq 34;23;3;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus sp. GMD4S prophage linear Cluster_20 Bacilli_gi_419856271 hallmark;refseq 22;13;3;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Leuconostocaceae;Oenococcus Oenococcus oeni AWRIB202 extrachromosomal linear Cluster_32 Bacilli_gi_419856838 hallmark;refseq 21;13;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Leuconostocaceae;Oenococcus Oenococcus oeni AWRIB202 extrachromosomal linear Cluster_32 Bacilli_gi_420145258 hallmark 78;26;5;47 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus coryniformis subsp. coryniformis CECT 5711 extrachromosomal linear Cluster_565 Bacilli_gi_420163024-321145-357961 hallmark;refseq 50;37;1;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus epidermidis NIHLM095 prophage linear Cluster_6 Bacilli_gi_420167530-156173-192990 hallmark;refseq 49;36;1;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus epidermidis NIHLM087 prophage linear Cluster_6 Bacilli_gi_420172277 hallmark;refseq 70;62;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus epidermidis NIHLM067 extrachromosomal linear Cluster_8 Bacilli_gi_420182616-41694-83385 hallmark;refseq 69;60;4;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus epidermidis NIHLM049 prophage linear Cluster_8 Bacilli_gi_420216378-0-39145 hallmark;refseq 69;58;3;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus epidermidis NIH05001 prophage linear Cluster_6 Bacilli_gi_420218063-0-39510 hallmark;refseq 63;55;5;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus epidermidis NIH05001 prophage linear Cluster_8 Bacilli_gi_420218610 hallmark;refseq 27;21;;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus epidermidis NIH04008 extrachromosomal linear Cluster_6 Bacilli_gi_420219255 hallmark;refseq 25;14;1;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus epidermidis NIH04008 extrachromosomal linear Cluster_257 Bacilli_gi_420219606 refseq 15;9;1;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Spbetalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus epidermidis NIH04008 extrachromosomal linear Cluster_471 Bacilli_gi_420220190-3871-46499 hallmark;refseq 73;61;4;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus epidermidis NIH04008 prophage linear Cluster_8 Bacilli_gi_420225008-3736-45574 hallmark;refseq 68;61;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus epidermidis NIH06004 prophage linear Cluster_8 Bacilli_gi_420231795 hallmark;refseq 22;15;2;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus epidermidis NIH051668 extrachromosomal linear Cluster_6 Bacilli_gi_420233404 refseq 60;17;6;37 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus epidermidis NIH051668 extrachromosomal linear Cluster_194 Bacilli_gi_420233465 refseq 50;23;4;23 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Spbetalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus epidermidis NIH051668 extrachromosomal linear Cluster_211 Bacilli_gi_420265149 hallmark;refseq 24;21;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus mali KCTC 3596 = DSM 20444 extrachromosomal linear Cluster_289 Bacilli_gi_420265558 hallmark;refseq 21;14;3;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus mali KCTC 3596 = DSM 20444 extrachromosomal linear Cluster_32 Bacilli_gi_420266791 hallmark;refseq 17;14;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus mali KCTC 3596 = DSM 20444 extrachromosomal linear Cluster_52 Bacilli_gi_421147537-68568-104677 hallmark;refseq 49;37;2;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae GB00112 prophage linear Cluster_88 Bacilli_gi_421150017-104330-146395 hallmark;refseq 65;64;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus str. Newbould 305 prophage linear Cluster_8 Bacilli_gi_421192230 hallmark;refseq 119;53;29;37 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Leuconostocaceae;Oenococcus Oenococcus oeni AWRIB548 extrachromosomal linear Cluster_32 Bacilli_gi_421207796 hallmark;refseq 26;16;1;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae 2090008 extrachromosomal linear Cluster_17 Bacilli_gi_421208975 hallmark 19;7;3;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae 2070005 extrachromosomal linear Cluster_469 Bacilli_gi_421209991-6314-37991 hallmark;refseq;vdb 43;29;5;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae 2070035 prophage linear Cluster_30 Bacilli_gi_421219160 hallmark;refseq 36;25;1;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae 2070335 extrachromosomal linear Cluster_57 Bacilli_gi_421221512 hallmark;refseq 18;12;1;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae 2070425 extrachromosomal linear Cluster_50 Bacilli_gi_421221530 hallmark;refseq 45;36;2;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae 2070425 extrachromosomal linear Cluster_30 Bacilli_gi_421223748 refseq 24;17;2;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae 2070531 extrachromosomal linear Cluster_50 Bacilli_gi_421223772 refseq 26;13;4;9 Viruses;unclassified;unclassified;unclassified;unclassified;unclassified Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae 2070531 extrachromosomal linear Cluster_50 Bacilli_gi_421226164 hallmark 20;7;3;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae 2070768 extrachromosomal linear Cluster_469 Bacilli_gi_421228548 hallmark;refseq 68;44;5;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae 2072047 extrachromosomal linear Cluster_50 Bacilli_gi_421230819 hallmark;refseq 26;17;1;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae 2061376 extrachromosomal linear Cluster_17 Bacilli_gi_421232949 hallmark;refseq 50;38;4;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae 2080076 extrachromosomal linear Cluster_31 Bacilli_gi_421235103-11785-51629 hallmark;refseq 57;42;3;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae 2061617 prophage linear Cluster_31 Bacilli_gi_421237372 hallmark;refseq 60;32;5;23 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae 2071004 extrachromosomal linear Cluster_50 Bacilli_gi_421237437 hallmark;refseq 47;37;3;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae 2071247 extrachromosomal linear Cluster_31 Bacilli_gi_421241725 hallmark;refseq 50;35;3;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae 2080913 extrachromosomal linear Cluster_50 Bacilli_gi_421281395-108743-146282 hallmark;refseq 52;51;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae GA04672 prophage linear Cluster_52 Bacilli_gi_421288669-8414-15109 refseq 14;9;;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae GA54354 prophage linear Cluster_30 Bacilli_gi_421291971-20337-47087 hallmark;refseq 36;24;3;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae GA56348 prophage linear Cluster_487 Bacilli_gi_421303949 hallmark;refseq 42;28;3;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae GA62331 extrachromosomal linear Cluster_30 Bacilli_gi_421305463-0-41015 hallmark;refseq 60;42;4;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae GA62331 prophage linear Cluster_50 Bacilli_gi_421310660 refseq 15;11;1;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae GA62681 extrachromosomal linear Cluster_31 Bacilli_gi_421311788-118037-144785 hallmark;refseq 37;24;4;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae GA58981 prophage linear Cluster_487 Bacilli_gi_421489513-66758-103300 hallmark;refseq 56;48;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus anginosus SK1138 prophage linear Cluster_52 Bacilli_gi_421512330 hallmark;refseq 21;11;2;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis ATCC 29212 extrachromosomal linear Cluster_222 Bacilli_gi_421512733 hallmark;refseq 22;15;3;4 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis ATCC 29212 extrachromosomal linear Cluster_145 Bacilli_gi_421766543 hallmark;refseq 21;18;;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Lactococcus Lactococcus garvieae DCC43 extrachromosomal linear Cluster_30 Bacilli_gi_421767366 hallmark;refseq 26;24;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Lactococcus Lactococcus garvieae DCC43 extrachromosomal linear Cluster_57 Bacilli_gi_421767858 hallmark;refseq 28;17;4;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Lactococcus Lactococcus garvieae DCC43 extrachromosomal linear Cluster_356 Bacilli_gi_421858131 hallmark;refseq 17;12;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Paenibacillaceae;Paenibacillus Paenibacillus popilliae ATCC 14706 extrachromosomal linear Cluster_42 Bacilli_gi_421859220 hallmark;refseq 18;14;1;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Paenibacillaceae;Paenibacillus Paenibacillus popilliae ATCC 14706 extrachromosomal linear Cluster_15 Bacilli_gi_421859620 hallmark;refseq 32;21;2;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Paenibacillaceae;Paenibacillus Paenibacillus popilliae ATCC 14706 extrachromosomal linear Cluster_15 Bacilli_gi_421892111 hallmark;refseq 22;20;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes NS88.2 extrachromosomal linear Cluster_143 Bacilli_gi_422743901-102184-143684 hallmark;refseq 55;52;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus MRSA177 prophage linear Cluster_6 Bacilli_gi_422746016-196303-243376 hallmark;refseq 67;64;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus MRSA131 prophage linear Cluster_6 Bacilli_gi_422757969-1394223-1432038 hallmark;refseq 69;52;1;16 Viruses;unclassified;unclassified;unclassified;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957 prophage linear Cluster_57 Bacilli_gi_422757969-1724554-1772897 hallmark;refseq 74;53;6;15 Viruses;unclassified phages;;;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957 prophage linear Cluster_115 Bacilli_gi_423079685 hallmark;refseq 51;44;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus rhamnosus ATCC 21052 extrachromosomal linear Cluster_133 Bacilli_gi_423321503-348617-402292 hallmark;refseq 80;35;7;38 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus crispatus FB077-07 prophage linear Cluster_206 Bacilli_gi_423364338 hallmark 86;30;11;45 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Punalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus cereus VD022 extrachromosomal linear Cluster_150 Bacilli_gi_423364498 hallmark;refseq 72;25;12;35 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus cereus VD022 extrachromosomal linear Cluster_423 Bacilli_gi_423364641 hallmark 58;15;5;38 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus cereus VD022 extrachromosomal linear Cluster_365 Bacilli_gi_423364702 hallmark;vdb 28;10;;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus cereus VD022 extrachromosomal linear Cluster_365 Bacilli_gi_423388038 hallmark;refseq 75;37;18;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus cereus BAG1X1-2 extrachromosomal linear Cluster_186 Bacilli_gi_423399425 hallmark;refseq 83;43;14;26 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus cereus BAG2X1-1 extrachromosomal circular Cluster_116 Bacilli_gi_423399602-2939316-2990500 hallmark;refseq 70;40;10;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus cereus BAG2X1-2 prophage linear Cluster_76 Bacilli_gi_423405198 hallmark;refseq 76;48;7;21 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus cereus BAG2X1-2 extrachromosomal circular Cluster_116 Bacilli_gi_423410568 hallmark;refseq 87;46;6;35 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus cereus BAG2X1-3 extrachromosomal circular Cluster_116 Bacilli_gi_423416314 hallmark;refseq 82;35;16;31 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus cereus BAG3O-2 extrachromosomal linear Cluster_186 Bacilli_gi_423416397 hallmark;refseq 78;48;9;21 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus cereus BAG3O-2 extrachromosomal circular Cluster_116 Bacilli_gi_423422311-2192763-2255576 hallmark;refseq 78;60;3;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus cereus BAG3X2-2 prophage linear Cluster_308 Bacilli_gi_423427972 hallmark;refseq 84;38;17;29 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus cereus BAG3X2-2 extrachromosomal circular Cluster_186 Bacilli_gi_423433709 hallmark;refseq 89;36;17;36 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus cereus BAG4O-1 extrachromosomal linear Cluster_186 Bacilli_gi_423445290 hallmark;refseq 68;35;1;32 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus cereus BAG4X2-1 extrachromosomal circular Cluster_119 Bacilli_gi_423468587 hallmark;refseq 81;40;11;30 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus cereus BAG6O-1 extrachromosomal circular Cluster_116 Bacilli_gi_423480041 hallmark;refseq 101;30;28;43 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus cereus BAG6X1-1 extrachromosomal linear Cluster_268 Bacilli_gi_423490892 hallmark;refseq 72;38;14;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus cereus BtB2-4 extrachromosomal linear Cluster_135 Bacilli_gi_423490981 hallmark;refseq 79;37;;42 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus cereus BtB2-4 extrachromosomal circular Cluster_192 Bacilli_gi_423496617 hallmark;refseq 101;60;17;24 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus cereus CER057 extrachromosomal linear Cluster_135 Bacilli_gi_423502290 hallmark;refseq 70;37;13;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus cereus CER074 extrachromosomal circular Cluster_135 Bacilli_gi_423508375 refseq 13;12;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus cereus HD73 extrachromosomal linear Cluster_55 Bacilli_gi_423532033 hallmark;refseq 85;35;16;34 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus cereus HuB1-1 extrachromosomal linear Cluster_186 Bacilli_gi_423549186 hallmark;refseq 83;48;10;25 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus cereus HuB5-5 extrachromosomal circular Cluster_135 Bacilli_gi_423549292 hallmark;refseq 30;18;2;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus cereus HuB5-5 extrachromosomal circular Cluster_135 Bacilli_gi_423560503 hallmark;refseq 53;28;4;21 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus cereus MC67 extrachromosomal linear Cluster_135 Bacilli_gi_423560596-2938638-2975754 hallmark;refseq 58;54;;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus cereus MSX-A1 prophage linear Cluster_290 Bacilli_gi_423560596-4340049-4380676 hallmark;refseq 48;26;6;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus cereus MSX-A1 prophage linear Cluster_241 Bacilli_gi_423572409 hallmark;refseq 27;26;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus cereus MSX-A12 extrachromosomal linear Cluster_135 Bacilli_gi_423572483 refseq 29;28;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus cereus MSX-A12 extrachromosomal linear Cluster_116 Bacilli_gi_423572779-4730538-4764456 hallmark;refseq 52;33;4;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus cereus MSX-D12 prophage linear Cluster_119 Bacilli_gi_423584588-368833-409419 hallmark;refseq 60;49;2;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus cereus VD045 prophage linear Cluster_55 Bacilli_gi_424772886-28233-72014 hallmark;refseq 72;69;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus CM05 prophage linear Cluster_35 Bacilli_gi_42518084-1292528-1330402 hallmark;refseq 55;51;;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus johnsonii NCC 533 prophage linear Cluster_474 Bacilli_gi_425736919-157078-193613 hallmark;refseq 53;37;2;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus massiliensis S46 prophage linear Cluster_40 Bacilli_gi_425738963 hallmark;refseq 14;7;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus massiliensis S46 extrachromosomal linear Cluster_161 Bacilli_gi_427394458 hallmark;refseq 18;16;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Carnobacteriaceae;Alloiococcus Alloiococcus otitis ATCC 51267 extrachromosomal linear Cluster_41 Bacilli_gi_427441627 hallmark;refseq 60;37;1;22 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Pediococcus Pediococcus lolii NGRI 0510Q extrachromosomal linear Cluster_159 Bacilli_gi_428765681-1849705-1891283 hallmark;refseq 62;61;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis str. Symbioflor 1 prophage linear Cluster_41 Bacilli_gi_429204493 hallmark;refseq 47;30;3;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus saerimneri 30a extrachromosomal linear Cluster_399 Bacilli_gi_430356286-17-14694 hallmark;refseq 16;11;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis OG1X prophage linear Cluster_41 Bacilli_gi_430369546-17-14695 hallmark;refseq 16;11;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis M7 prophage linear Cluster_41 Bacilli_gi_433542171 hallmark;refseq 16;13;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Paenibacillaceae;Brevibacillus Brevibacillus agri BAB-2500 extrachromosomal linear Cluster_55 Bacilli_gi_433544975 refseq 17;10;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Paenibacillaceae;Brevibacillus Brevibacillus agri BAB-2500 extrachromosomal linear Cluster_17 Bacilli_gi_433547270 hallmark;refseq 76;25;12;39 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Paenibacillaceae;Brevibacillus Brevibacillus agri BAB-2500 extrachromosomal linear Cluster_105 Bacilli_gi_434373506-3050122-3090701 hallmark;refseq 58;33;9;16 Viruses;unclassified;unclassified;unclassified;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus thuringiensis HD-789 prophage linear Cluster_241 Bacilli_gi_434373506-3817766-3858377 hallmark;refseq 48;27;5;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus thuringiensis HD-789 prophage linear Cluster_241 Bacilli_gi_440706325 hallmark;refseq 29;28;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus 21282 extrachromosomal linear Cluster_8 Bacilli_gi_440706401 hallmark;refseq 51;48;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus 21282 extrachromosomal linear Cluster_40 Bacilli_gi_440707089 hallmark;refseq 21;21;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus 21282 extrachromosomal linear Cluster_49 Bacilli_gi_440708296 refseq 27;15;9;3 Viruses;dsDNA viruses no RNA stage;unclassified;unclassified;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus 21282 extrachromosomal linear Cluster_254 Bacilli_gi_443637144 hallmark;refseq 35;35;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus 21236 extrachromosomal linear Cluster_56 Bacilli_gi_443637600 hallmark;refseq 37;36;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus 21236 extrachromosomal linear Cluster_8 Bacilli_gi_443637869 hallmark;refseq 65;61;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus 21196 extrachromosomal linear Cluster_56 Bacilli_gi_444891724-1663358-1699962 hallmark;refseq 60;47;4;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae PCS70012 prophage linear Cluster_31 Bacilli_gi_444891813 hallmark;refseq 66;47;10;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae PCS81218 extrachromosomal linear Cluster_31 Bacilli_gi_444892102-4544-41147 hallmark;refseq 60;47;4;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae PNI0006 prophage linear Cluster_31 Bacilli_gi_444892229-0-19408 hallmark;refseq 42;30;3;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae PNI0007 prophage linear Cluster_31 Bacilli_gi_444893116-93-38687 hallmark;refseq 62;47;5;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae PNI0009 prophage linear Cluster_31 Bacilli_gi_444893195-172842-209448 hallmark;refseq 60;47;4;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae PNI0010 prophage linear Cluster_31 Bacilli_gi_444893273 hallmark;refseq 51;37;4;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae PNI0076 extrachromosomal linear Cluster_31 Bacilli_gi_444893437 hallmark;refseq 66;47;10;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae PNI0360 extrachromosomal linear Cluster_31 Bacilli_gi_444897497 hallmark;refseq 60;44;7;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae PNI0427 extrachromosomal linear Cluster_31 Bacilli_gi_444897776 refseq 20;10;4;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae PNI0446 extrachromosomal linear Cluster_31 Bacilli_gi_445070017-335640-372244 hallmark;refseq 61;48;4;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae PNI0153 prophage linear Cluster_31 Bacilli_gi_445070857 hallmark;refseq 58;44;4;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae PNI0199 extrachromosomal linear Cluster_31 Bacilli_gi_448741607-45152-79085 hallmark;refseq 40;38;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus KT/314250 prophage linear Cluster_6 Bacilli_gi_448741692 hallmark;refseq 35;34;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus KT/314250 extrachromosomal linear Cluster_35 Bacilli_gi_448879146-1659265-1699117 hallmark;refseq 60;46;4;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus sp. F0441 prophage linear Cluster_31 Bacilli_gi_448879149-252108-297819 hallmark;refseq 66;44;3;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus sp. F0442 prophage linear Cluster_31 Bacilli_gi_448879155 hallmark;refseq 42;17;10;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus urinalis FB127-CNA-2 extrachromosomal linear Cluster_20 Bacilli_gi_450065761-18938-58696 hallmark;refseq 49;40;2;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus mutans NLML9 prophage linear Cluster_32 Bacilli_gi_450082728 hallmark;refseq 28;24;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus mutans N66 extrachromosomal linear Cluster_32 Bacilli_gi_451952299 hallmark;refseq 31;18;8;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus sp. GMD3E extrachromosomal linear Cluster_90 Bacilli_gi_452721209 refseq;vdb 19;10;4;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus GR1 extrachromosomal linear Cluster_337 Bacilli_gi_452721217-29-29111 hallmark;refseq 36;35;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus GR1 prophage linear Cluster_49 Bacilli_gi_452725555 hallmark;refseq 56;21;15;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae FSL C1-494 extrachromosomal linear Cluster_20 Bacilli_gi_452725796 hallmark;refseq 58;22;14;22 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae FSL S3-603 extrachromosomal linear Cluster_20 Bacilli_gi_452725803 hallmark;refseq;vdb 30;20;5;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae FSL S3-603 extrachromosomal linear Cluster_52 Bacilli_gi_452725808 hallmark;refseq 21;19;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae FSL S3-603 extrachromosomal linear Cluster_68 Bacilli_gi_452725916 hallmark;refseq 83;40;29;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae FSL S3-003 extrachromosomal linear Cluster_65 Bacilli_gi_452726033-41981-81552 hallmark;refseq 60;43;4;13 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae CCUG 25532 prophage linear Cluster_65 Bacilli_gi_452726042-108192-148054 hallmark;refseq 53;39;4;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae CCUG 25532 prophage linear Cluster_88 Bacilli_gi_452726130-29364-47853 refseq 38;20;3;15 Viruses;unclassified;unclassified;unclassified;unclassified;unclassified Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae CCUG 37737 prophage linear Cluster_65 Bacilli_gi_452726158-107824-145149 hallmark;refseq;vdb 63;36;10;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae CCUG 37738 prophage linear Cluster_62 Bacilli_gi_452726386-99653-138270 hallmark;refseq;vdb 68;42;7;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae CCUG 44077 prophage linear Cluster_62 Bacilli_gi_452726387 hallmark;refseq;vdb 18;11;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae CCUG 44077 extrachromosomal linear Cluster_20 Bacilli_gi_452726394 hallmark 29;10;7;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae CCUG 44077 extrachromosomal linear Cluster_20 Bacilli_gi_452726490 hallmark;refseq 50;32;6;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae LMG 15091 extrachromosomal linear Cluster_166 Bacilli_gi_452726509-5707-45963 hallmark;refseq 61;38;3;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae LMG 15091 prophage linear Cluster_68 Bacilli_gi_452726573-10408-34786 hallmark;refseq 25;22;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae LMG 15092 prophage linear Cluster_30 Bacilli_gi_452726598 refseq 29;15;;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae LMG 15092 extrachromosomal linear Cluster_68 Bacilli_gi_452726602 hallmark;refseq 19;15;1;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae LMG 15092 extrachromosomal linear Cluster_57 Bacilli_gi_452726650 refseq 22;12;4;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae LMG 15093 extrachromosomal linear Cluster_62 Bacilli_gi_452726651 hallmark;refseq 43;26;8;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae LMG 15093 extrachromosomal linear Cluster_62 Bacilli_gi_452726694 hallmark 21;9;2;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae LMG 15093 extrachromosomal linear Cluster_30 Bacilli_gi_452727009-1609-45850 hallmark;refseq;vdb 73;45;8;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae BSU188 prophage linear Cluster_65 Bacilli_gi_452727111 hallmark;refseq 37;25;4;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;C2likevirus;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae BSU178 extrachromosomal linear Cluster_62 Bacilli_gi_452727118 hallmark;refseq 44;20;12;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae BSU178 extrachromosomal linear Cluster_20 Bacilli_gi_452727152-47876-79937 hallmark;refseq 47;33;5;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae BSU96 prophage linear Cluster_30 Bacilli_gi_452727184 refseq 23;16;;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae BSU165 extrachromosomal linear Cluster_68 Bacilli_gi_452727197 hallmark;refseq 21;21;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae BSU165 extrachromosomal linear Cluster_68 Bacilli_gi_452727198 hallmark;refseq 19;16;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae BSU165 extrachromosomal linear Cluster_361 Bacilli_gi_452727297 hallmark;refseq 17;17;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae BSU167 extrachromosomal linear Cluster_68 Bacilli_gi_452727314 hallmark;refseq 74;37;20;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae BSU167 extrachromosomal linear Cluster_65 Bacilli_gi_452727506-2076-45570 hallmark;refseq 44;20;10;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae STIR-CD-21 prophage linear Cluster_20 Bacilli_gi_452727518-3040-44246 hallmark;refseq 52;25;13;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae STIR-CD-22 prophage linear Cluster_20 Bacilli_gi_452727572 refseq 12;7;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae STIR-CD-23 extrachromosomal linear Cluster_20 Bacilli_gi_452727694-2700-43806 hallmark;refseq 43;20;10;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae STIR-CD-27 prophage linear Cluster_20 Bacilli_gi_452727743 hallmark;refseq 41;19;11;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae STIR-CD-28 extrachromosomal linear Cluster_20 Bacilli_gi_452728166-2357-46245 hallmark;refseq 44;21;9;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae MRI Z1-211 prophage linear Cluster_20 Bacilli_gi_452728186 hallmark;refseq 39;17;10;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae MRI Z1-212 extrachromosomal linear Cluster_20 Bacilli_gi_452728242-0-44812 hallmark;refseq 50;21;11;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae MRI Z1-213 prophage linear Cluster_20 Bacilli_gi_452728252 hallmark;refseq 24;16;5;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae MRI Z1-213 extrachromosomal linear Cluster_62 Bacilli_gi_452728317 hallmark;refseq 21;11;6;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae MRI Z1-214 extrachromosomal linear Cluster_20 Bacilli_gi_452728318 hallmark 33;10;8;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae MRI Z1-214 extrachromosomal linear Cluster_20 Bacilli_gi_452728348 hallmark;refseq 57;40;5;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae MRI Z1-214 extrachromosomal linear Cluster_62 Bacilli_gi_452728466 hallmark;refseq 55;21;15;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae MRI Z1-216 extrachromosomal linear Cluster_20 Bacilli_gi_452728534 hallmark;refseq 18;16;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae LDS 617 extrachromosomal linear Cluster_62 Bacilli_gi_452728584 hallmark;refseq 19;19;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae LDS 617 extrachromosomal linear Cluster_68 Bacilli_gi_452728659 hallmark;refseq 56;23;12;21 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae LDS 628 extrachromosomal linear Cluster_20 Bacilli_gi_452728672 hallmark;refseq 26;23;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae LDS 628 extrachromosomal linear Cluster_68 Bacilli_gi_452728825 hallmark;refseq 50;21;13;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae str. Gottschalk 992B extrachromosomal linear Cluster_20 Bacilli_gi_452728885-101911-133702 hallmark;refseq 47;33;5;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae GB00003 prophage linear Cluster_30 Bacilli_gi_452728929 hallmark;refseq 50;21;14;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae GB00013 extrachromosomal circular Cluster_20 Bacilli_gi_452728962-1899-45787 hallmark;refseq 44;21;8;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae GB00020 prophage linear Cluster_20 Bacilli_gi_452729015 hallmark;refseq 52;21;14;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae GB00083 extrachromosomal linear Cluster_20 Bacilli_gi_452729028-1578-45466 hallmark;refseq 44;21;9;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae GB00084 prophage linear Cluster_20 Bacilli_gi_452729088 hallmark;refseq 40;29;5;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae GB00092 extrachromosomal linear Cluster_65 Bacilli_gi_452729151-20879-57652 hallmark;refseq;vdb 49;36;3;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae GB00111 prophage linear Cluster_88 Bacilli_gi_452729177-68896-109233 hallmark;refseq 49;40;3;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae GB00115 prophage linear Cluster_70 Bacilli_gi_452729336-26767-65244 hallmark;refseq 53;38;3;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae GB00206 prophage linear Cluster_88 Bacilli_gi_452729338-45870-77661 hallmark;refseq 47;31;6;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae GB00206 prophage linear Cluster_30 Bacilli_gi_452729404-7-41317 hallmark;refseq 66;43;9;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;C2likevirus;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae GB00241 prophage linear Cluster_65 Bacilli_gi_452729407 hallmark;refseq 49;21;13;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae GB00241 extrachromosomal linear Cluster_20 Bacilli_gi_452729492-303-40638 hallmark;refseq 49;40;3;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae GB00264 prophage linear Cluster_70 Bacilli_gi_452729518-90723-128125 hallmark;refseq;vdb 47;38;3;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae GB00279 prophage linear Cluster_70 Bacilli_gi_452729520-4284-35745 hallmark;refseq 45;32;3;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae GB00279 prophage linear Cluster_166 Bacilli_gi_452729546 hallmark;refseq 19;17;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae GB00300 extrachromosomal linear Cluster_30 Bacilli_gi_452729547 hallmark;refseq 29;23;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae GB00300 extrachromosomal linear Cluster_65 Bacilli_gi_452729603 hallmark;refseq 86;47;15;24 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae GB00543 extrachromosomal linear Cluster_65 Bacilli_gi_452729703-69077-105187 hallmark;refseq 50;38;2;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae GB00557 prophage linear Cluster_88 Bacilli_gi_452729709 refseq 35;19;6;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae GB00561 extrachromosomal linear Cluster_62 Bacilli_gi_452729710 hallmark;refseq 35;29;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae GB00561 extrachromosomal linear Cluster_70 Bacilli_gi_452729736-118964-151191 hallmark;refseq 50;31;5;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae GB00561 prophage linear Cluster_30 Bacilli_gi_452729747 hallmark;refseq 20;19;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae GB00561 extrachromosomal linear Cluster_68 Bacilli_gi_452729750 hallmark;refseq 20;16;1;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae GB00561 extrachromosomal linear Cluster_361 Bacilli_gi_452729793 hallmark;refseq;vdb 50;26;14;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae GB00601 extrachromosomal linear Cluster_62 Bacilli_gi_452729950-44885-78705 hallmark;refseq 48;33;6;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae GB00654 prophage linear Cluster_30 Bacilli_gi_452729957-21553-57662 hallmark;refseq 49;37;2;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae GB00654 prophage linear Cluster_88 Bacilli_gi_452730089 refseq 22;12;4;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae GB00865 extrachromosomal linear Cluster_62 Bacilli_gi_452730094 hallmark;refseq 34;25;2;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae GB00865 extrachromosomal linear Cluster_361 Bacilli_gi_452730163 hallmark;refseq 17;16;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae GB00874 extrachromosomal linear Cluster_197 Bacilli_gi_452730165-1863-45751 hallmark;refseq 44;21;9;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae GB00874 prophage linear Cluster_20 Bacilli_gi_452730166 hallmark;refseq 21;18;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae GB00874 extrachromosomal linear Cluster_65 Bacilli_gi_452730223-105117-150027 hallmark;refseq 72;47;6;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae GB00884 prophage linear Cluster_65 Bacilli_gi_452730244-19419-54919 hallmark;refseq;vdb 65;43;4;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae GB00887 prophage linear Cluster_65 Bacilli_gi_452730288-2237-45156 hallmark;refseq 46;24;9;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae GB00888 prophage linear Cluster_20 Bacilli_gi_452730668 hallmark;refseq 18;16;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae GB00899 extrachromosomal linear Cluster_361 Bacilli_gi_452730788 refseq 32;19;1;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae GB00899 extrachromosomal linear Cluster_62 Bacilli_gi_452730885 hallmark;refseq 46;21;13;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae GB00901 extrachromosomal linear Cluster_20 Bacilli_gi_452730900-130866-165765 hallmark;refseq 56;37;2;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae GB00901 prophage linear Cluster_65 Bacilli_gi_452730938-8365-49750 hallmark;refseq 44;21;10;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae GB00904 prophage linear Cluster_20 Bacilli_gi_452730940 hallmark;refseq 36;30;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae GB00904 extrachromosomal linear Cluster_68 Bacilli_gi_452730991-98558-142890 hallmark;refseq;vdb 73;46;7;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae GB00911 prophage linear Cluster_65 Bacilli_gi_452731028-6901-45440 hallmark;refseq 67;47;3;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;C2likevirus;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae GB00922 prophage linear Cluster_65 Bacilli_gi_452731079-1616-43001 hallmark;refseq 43;21;9;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae GB00923 prophage linear Cluster_20 Bacilli_gi_452731093-8707-49882 hallmark;refseq 42;21;9;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae GB00924 prophage linear Cluster_20 Bacilli_gi_452731147-3529-44914 hallmark;refseq 43;21;9;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae GB00929 prophage linear Cluster_20 Bacilli_gi_452731199-133480-177733 hallmark;refseq;vdb 73;45;8;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae GB00933 prophage linear Cluster_65 Bacilli_gi_452731391-8546-40774 hallmark;refseq 47;33;6;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae GB00947 prophage linear Cluster_30 Bacilli_gi_452731493 hallmark;refseq 48;21;13;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae GB00955 extrachromosomal linear Cluster_20 Bacilli_gi_452731701 hallmark;refseq 21;12;5;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae GB00959 extrachromosomal linear Cluster_20 Bacilli_gi_452731784-6162-46651 hallmark;refseq;vdb 69;44;7;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;C2likevirus;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae GB00975 prophage linear Cluster_62 Bacilli_gi_452731872-3816-44971 hallmark;refseq 43;21;9;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae GB00984 prophage linear Cluster_20 Bacilli_gi_452731877-0-45193 hallmark;refseq 72;46;6;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae GB00984 prophage linear Cluster_65 Bacilli_gi_452741601 hallmark;refseq 21;21;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus 16K extrachromosomal linear Cluster_40 Bacilli_gi_452741739 refseq 53;39;12;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus PM1 extrachromosomal linear Cluster_254 Bacilli_gi_452741743-79-29606 hallmark;refseq 44;44;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus PM1 prophage linear Cluster_40 Bacilli_gi_452741813-125310-169923 hallmark;refseq 62;59;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus NN54 prophage linear Cluster_6 Bacilli_gi_452741934 hallmark;refseq 58;43;5;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae SPN7465 extrachromosomal linear Cluster_31 Bacilli_gi_452741973-1632797-1666339 hallmark;refseq;vdb 49;39;1;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae SPN021198 prophage linear Cluster_31 Bacilli_gi_452741991 hallmark;refseq 50;44;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae SPN072838 extrachromosomal linear Cluster_31 Bacilli_gi_458798330-349456-403365 hallmark;refseq;vdb 88;37;6;45 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;T4likevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus sonorensis L12 prophage linear Cluster_407 Bacilli_gi_459284225-1720262-1756205 hallmark;refseq 60;41;2;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Lactococcus Lactococcus lactis subsp. lactis IO-1 prophage linear Cluster_195 Bacilli_gi_459788634-14632-35431 hallmark;refseq 32;23;2;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Phic3unalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Listeriaceae;Listeria Listeria fleischmannii LU2006-1 prophage linear Cluster_32 Bacilli_gi_459789085 hallmark;refseq 30;14;4;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Listeriaceae;Listeria Listeria fleischmannii LU2006-1 extrachromosomal linear Cluster_6 Bacilli_gi_459790340-432953-471546 hallmark;refseq 56;40;1;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus parauberis KRS-02083 prophage linear Cluster_32 Bacilli_gi_459819101-64627-104037 hallmark;refseq 61;44;1;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus tigurinus AZ_3a prophage linear Cluster_31 Bacilli_gi_470922499 hallmark;refseq 64;28;8;28 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus stratosphericus LAMA 585 extrachromosomal linear Cluster_49 Bacilli_gi_47092373-35639-76172 hallmark;refseq 69;49;11;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Listeriaceae;Listeria Listeria monocytogenes serotype 4b str. H7858 prophage linear Cluster_94 Bacilli_gi_470935649 hallmark;refseq 21;10;4;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus plantarum UCMA 3037 extrachromosomal linear Cluster_138 Bacilli_gi_470952890 hallmark;refseq 39;18;9;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae CF01173 extrachromosomal linear Cluster_20 Bacilli_gi_470957326-10686-89923 hallmark;refseq 89;21;27;41 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae SS1014 prophage linear Cluster_220 Bacilli_gi_47095974-43-40624 hallmark;refseq 62;46;9;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Listeriaceae;Listeria Listeria monocytogenes serotype 1/2a str. F6854 prophage linear Cluster_185 Bacilli_gi_47569625 refseq 44;25;7;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus cereus G9241 extrachromosomal linear Cluster_116 Bacilli_gi_476525634-6267-41028 hallmark;refseq;vdb 55;33;5;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus durans IPLA 655 prophage linear Cluster_119 Bacilli_gi_479328021-1541325-1589007 hallmark;refseq 71;65;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1 prophage linear Cluster_6 Bacilli_gi_480445016-1058696-1104024 hallmark;refseq 54;49;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0719 prophage linear Cluster_6 Bacilli_gi_480445016-710443-754751 hallmark;refseq 58;56;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0719 prophage linear Cluster_8 Bacilli_gi_480447120-324466-342964 hallmark;refseq 42;41;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0769 prophage linear Cluster_8 Bacilli_gi_480454219-425923-470373 hallmark;refseq 55;52;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0770 prophage linear Cluster_6 Bacilli_gi_480530348-23745-57287 hallmark;refseq;vdb 49;39;1;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae SPN994039 prophage linear Cluster_31 Bacilli_gi_480533968-23745-57287 hallmark;refseq;vdb 49;39;1;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae SPN994038 prophage linear Cluster_31 Bacilli_gi_480535788-23745-57287 hallmark;refseq;vdb 49;39;1;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae SPN034183 prophage linear Cluster_31 Bacilli_gi_480994456-0-25579 hallmark;refseq 29;18;3;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus sp. GMD5S prophage linear Cluster_20 Bacilli_gi_481024207 refseq 11;6;5; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;T4likevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus PPUKM-261-2009 extrachromosomal linear Cluster_541 Bacilli_gi_481024309 refseq 48;16;2;30 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus PPUKM-261-2009 extrachromosomal linear Cluster_194 Bacilli_gi_481024485-52394-82914 hallmark;refseq 38;37;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus PPUKM-332-2009 prophage linear Cluster_6 Bacilli_gi_481024565 refseq 38;15;2;21 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Spbetalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus PPUKM-332-2009 extrachromosomal linear Cluster_194 Bacilli_gi_481024571 refseq 44;24;5;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus PPUKM-332-2009 extrachromosomal linear Cluster_211 Bacilli_gi_481024682 hallmark;refseq 44;36;6;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus PPUKM-377-2009 extrachromosomal linear Cluster_8 Bacilli_gi_481024711 refseq 12;9;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus PPUKM-377-2009 extrachromosomal linear Cluster_337 Bacilli_gi_481024735 hallmark;refseq 37;36;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus PPUKM-377-2009 extrachromosomal linear Cluster_6 Bacilli_gi_481024736 hallmark;refseq 31;31;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus PPUKM-377-2009 extrachromosomal linear Cluster_40 Bacilli_gi_481024739 refseq 26;15;8;3 Viruses;dsDNA viruses no RNA stage;unclassified;unclassified;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus PPUKM-377-2009 extrachromosomal linear Cluster_254 Bacilli_gi_481024799-89461-119979 hallmark;refseq 33;32;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus PPUKM-775-2009 prophage linear Cluster_6 Bacilli_gi_481024830 refseq 48;16;2;30 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus PPUKM-775-2009 extrachromosomal linear Cluster_194 Bacilli_gi_481024984-12820-57152 hallmark;refseq 65;58;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M2 prophage linear Cluster_40 Bacilli_gi_481025031-17-32408 hallmark;refseq 47;45;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus 3957 prophage linear Cluster_8 Bacilli_gi_481025031-337641-367855 hallmark;refseq 43;43;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus 3957 prophage linear Cluster_40 Bacilli_gi_481025061-0-33480 hallmark;refseq 51;51;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus LVP2 prophage linear Cluster_8 Bacilli_gi_481025070 hallmark;refseq 22;21;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus LVP2 extrachromosomal linear Cluster_35 Bacilli_gi_481025098 hallmark;refseq 21;21;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus LVP2 extrachromosomal linear Cluster_49 Bacilli_gi_481025125 refseq 18;10;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus LVP5 extrachromosomal linear Cluster_337 Bacilli_gi_481025128-557106-586729 hallmark;refseq 38;37;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus LVP5 prophage linear Cluster_49 Bacilli_gi_481025157-2928-28997 hallmark;refseq 35;35;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus VH221 prophage linear Cluster_40 Bacilli_gi_481025179 hallmark;refseq 40;38;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus VH221 extrachromosomal linear Cluster_49 Bacilli_gi_481025197 refseq 25;24;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus VH221 extrachromosomal linear Cluster_8 Bacilli_gi_481025272 hallmark;refseq 35;18;8;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae FSL S3-170 extrachromosomal linear Cluster_20 Bacilli_gi_481025615 refseq;vdb 10;1;6;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae FSL C1-487 extrachromosomal linear Cluster_220 Bacilli_gi_481025641 hallmark;refseq 54;22;14;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae FSL C1-487 extrachromosomal linear Cluster_20 Bacilli_gi_481025764 refseq;vdb 20;8;6;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae FSL S3-026 extrachromosomal linear Cluster_20 Bacilli_gi_481025765 hallmark 19;10;4;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae FSL S3-026 extrachromosomal linear Cluster_20 Bacilli_gi_481025831 hallmark 31;12;9;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae FSL S3-586 extrachromosomal linear Cluster_20 Bacilli_gi_481025847 hallmark 37;12;9;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae FSL S3-586 extrachromosomal linear Cluster_20 Bacilli_gi_481025939-2369-38046 hallmark;refseq 52;32;6;14 Viruses;unclassified;unclassified;unclassified;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae FSL S3-105 prophage linear Cluster_166 Bacilli_gi_481025944-6175-29564 hallmark;refseq 49;27;1;21 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae FSL S3-105 prophage linear Cluster_62 Bacilli_gi_481025945 hallmark;refseq;vdb 36;20;11;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae FSL S3-105 extrachromosomal linear Cluster_62 Bacilli_gi_481025968-0-40916 hallmark;refseq 49;24;11;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae FSL S3-105 prophage linear Cluster_20 Bacilli_gi_481026096 hallmark;refseq 36;19;8;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae FSL S3-251 extrachromosomal linear Cluster_20 Bacilli_gi_481026110 hallmark;refseq 27;21;1;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae FSL S3-251 extrachromosomal linear Cluster_62 Bacilli_gi_481026132 hallmark;refseq 52;22;14;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae FSL S3-023 extrachromosomal linear Cluster_20 Bacilli_gi_481026145-19322-50783 hallmark;refseq 45;32;3;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae FSL S3-090 prophage linear Cluster_166 Bacilli_gi_481026161-1592-40517 hallmark;refseq;vdb 67;41;4;22 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae FSL S3-090 prophage linear Cluster_65 Bacilli_gi_481026446-11850-50978 hallmark;refseq;vdb 67;41;7;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;C2likevirus;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae FSL S3-268 prophage linear Cluster_62 Bacilli_gi_481026520-9454-50787 hallmark;refseq;vdb 72;44;7;21 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;C2likevirus;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae FSL S3-005 prophage linear Cluster_62 Bacilli_gi_481026543-1504-45392 hallmark;refseq 44;21;9;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae FSL S3-001 prophage linear Cluster_20 Bacilli_gi_481026558 hallmark;refseq 31;18;;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae CCUG 91 extrachromosomal linear Cluster_65 Bacilli_gi_481026569 hallmark;refseq 35;25;1;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae CCUG 91 extrachromosomal linear Cluster_65 Bacilli_gi_481026583-9009-31886 hallmark;refseq 45;26;2;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae CCUG 91 prophage linear Cluster_65 Bacilli_gi_481026597-47782-79843 hallmark;refseq 47;33;5;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae CCUG 17336 prophage linear Cluster_30 Bacilli_gi_481026629-68607-104716 hallmark;refseq 49;37;2;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae CCUG 17336 prophage linear Cluster_88 Bacilli_gi_481026738-17833-52408 hallmark;refseq 66;43;4;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae CCUG 28551 prophage linear Cluster_65 Bacilli_gi_481026809-262624-294415 hallmark;refseq 47;33;5;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae CCUG 29376 prophage linear Cluster_30 Bacilli_gi_481026857 hallmark;refseq 52;22;14;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae CCUG 30636 extrachromosomal linear Cluster_20 Bacilli_gi_481026890 hallmark;refseq 52;33;7;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae CCUG 37736 extrachromosomal linear Cluster_166 Bacilli_gi_481026947 refseq 16;7;5;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae CCUG 37740 extrachromosomal linear Cluster_20 Bacilli_gi_481026958 hallmark 29;11;7;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae CCUG 37740 extrachromosomal linear Cluster_20 Bacilli_gi_481027039 hallmark;refseq 37;17;9;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae CCUG 44050 extrachromosomal linear Cluster_20 Bacilli_gi_481027065-15463-54257 hallmark;refseq 62;39;;23 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae CCUG 44074 prophage linear Cluster_65 Bacilli_gi_481027265-10173-63118 hallmark;refseq;vdb 80;40;23;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae CCUG 44110 prophage linear Cluster_62 Bacilli_gi_481027308 hallmark;refseq 51;21;13;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae CCUG 44140 extrachromosomal linear Cluster_20 Bacilli_gi_481027343-68798-104907 hallmark;refseq 49;37;2;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae CCUG 44186 prophage linear Cluster_88 Bacilli_gi_481027426 hallmark;refseq 43;20;11;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae CCUG 49072 extrachromosomal linear Cluster_20 Bacilli_gi_481027460-100277-132558 hallmark;refseq 46;33;3;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae CCUG 49086 prophage linear Cluster_166 Bacilli_gi_481027468-44864-77281 hallmark;refseq 47;32;6;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae CCUG 49086 prophage linear Cluster_30 Bacilli_gi_481027489-19253-50685 hallmark;refseq 45;32;3;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae CCUG 49100 prophage linear Cluster_166 Bacilli_gi_481027494 hallmark;refseq 50;21;13;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae CCUG 49100 extrachromosomal linear Cluster_20 Bacilli_gi_481027541 hallmark;refseq 47;20;13;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae LMG 15083 extrachromosomal linear Cluster_20 Bacilli_gi_481027544-39837-76776 hallmark;refseq 56;39;5;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae LMG 15083 prophage linear Cluster_62 Bacilli_gi_481027600-19323-53212 hallmark;refseq 53;38;2;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae LMG 15089 prophage linear Cluster_52 Bacilli_gi_481027614 hallmark;refseq 53;35;7;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae LMG 15089 extrachromosomal linear Cluster_62 Bacilli_gi_481027706-20664-52426 hallmark;refseq 48;31;3;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae BSU248 prophage linear Cluster_166 Bacilli_gi_481027755-0-45833 hallmark;refseq 46;21;11;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae BSU447 prophage linear Cluster_20 Bacilli_gi_481027788 hallmark;refseq 51;36;3;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae BSU260 extrachromosomal linear Cluster_88 Bacilli_gi_481027800 hallmark;refseq 57;38;6;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae BSU260 extrachromosomal linear Cluster_62 Bacilli_gi_481027825-215022-255439 hallmark;refseq 64;41;3;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae BSU451 prophage linear Cluster_65 Bacilli_gi_481028027-34357-73011 hallmark;refseq 59;46;3;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;C2likevirus;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae STIR-CD-14 prophage linear Cluster_65 Bacilli_gi_481028052 hallmark;refseq 59;38;7;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;C2likevirus;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae STIR-CD-25 extrachromosomal linear Cluster_62 Bacilli_gi_481028088 hallmark;refseq 35;17;10;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae STIR-CD-26 extrachromosomal linear Cluster_20 Bacilli_gi_481028166-43292-69307 hallmark;refseq 29;18;4;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae MRI Z1-022 prophage linear Cluster_20 Bacilli_gi_481028209-32815-50341 hallmark;refseq 41;24;2;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae MRI Z1-023 prophage linear Cluster_65 Bacilli_gi_481028229 hallmark;refseq 51;21;14;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae MRI Z1-025 extrachromosomal linear Cluster_20 Bacilli_gi_481028273-113676-151001 hallmark;refseq;vdb 64;36;10;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae MRI Z1-035 prophage linear Cluster_62 Bacilli_gi_481028301-48-39547 hallmark;refseq 53;38;5;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae MRI Z1-048 prophage linear Cluster_88 Bacilli_gi_481028372-8461-39542 hallmark;refseq 42;32;5;5 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae MRI Z1-048 prophage linear Cluster_65 Bacilli_gi_481028636 hallmark;refseq 26;14;6;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae MRI Z1-209 extrachromosomal linear Cluster_20 Bacilli_gi_481028700 refseq;vdb 11;5;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae MRI Z1-215 extrachromosomal linear Cluster_20 Bacilli_gi_481028723 hallmark;refseq 40;30;1;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae MRI Z1-217 extrachromosomal linear Cluster_62 Bacilli_gi_481028754 hallmark;refseq 18;9;5;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae MRI Z1-217 extrachromosomal linear Cluster_20 Bacilli_gi_481028771 refseq 10;7;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae MRI Z1-217 extrachromosomal linear Cluster_20 Bacilli_gi_481029021 refseq 26;18;1;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae LDS 623 extrachromosomal linear Cluster_65 Bacilli_gi_481029062 hallmark;refseq 19;16;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae LDS 623 extrachromosomal linear Cluster_68 Bacilli_gi_481029200 hallmark;refseq 19;11;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae str. Gottschalk 13227 extrachromosomal linear Cluster_20 Bacilli_gi_481029207 refseq 13;7;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae str. Gottschalk 13227 extrachromosomal linear Cluster_20 Bacilli_gi_481029223-8094-48204 hallmark;refseq 68;43;7;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;C2likevirus;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae str. Gottschalk 13227 prophage linear Cluster_62 Bacilli_gi_481029264 hallmark;refseq 51;21;14;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae str. Gottschalk 2864 extrachromosomal linear Cluster_20 Bacilli_gi_481029337-105603-137394 hallmark;refseq 46;32;5;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae str. Gottschalk 998A prophage linear Cluster_30 Bacilli_gi_481029451-7712-47449 hallmark;refseq;vdb 67;42;7;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;C2likevirus;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae FSL F2-338 prophage linear Cluster_62 Bacilli_gi_481029496-0-19298 hallmark;refseq;vdb 19;13;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae FSL S3-568 prophage linear Cluster_20 Bacilli_gi_481029515 hallmark;refseq;vdb 21;14;3;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae FSL S3-568 extrachromosomal linear Cluster_52 Bacilli_gi_481029706 hallmark;refseq 9;6;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae FSL S3-128 extrachromosomal linear Cluster_88 Bacilli_gi_481029738 hallmark;refseq 28;15;8;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae FSL S3-128 extrachromosomal linear Cluster_20 Bacilli_gi_481029743 hallmark;refseq 13;11;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae FSL S3-128 extrachromosomal linear Cluster_68 Bacilli_gi_481029813 refseq;vdb 14;5;3;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae FSL S3-043 extrachromosomal linear Cluster_20 Bacilli_gi_481030040 hallmark;refseq 34;23;1;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae FSL S3-027 extrachromosomal linear Cluster_62 Bacilli_gi_481030079-3467-44414 hallmark;refseq 46;22;8;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae FSL S3-027 prophage linear Cluster_20 Bacilli_gi_481030140 hallmark;refseq 79;53;14;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;C2likevirus;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae FSL S3-229 extrachromosomal linear Cluster_52 Bacilli_gi_481030151 hallmark;refseq 55;22;14;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae FSL S3-229 extrachromosomal linear Cluster_20 Bacilli_gi_481030213 hallmark;refseq 9;6;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae FSL S3-222 extrachromosomal linear Cluster_88 Bacilli_gi_481030245 hallmark;refseq 28;15;8;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae FSL S3-222 extrachromosomal linear Cluster_20 Bacilli_gi_481030250 hallmark;refseq 13;11;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae FSL S3-222 extrachromosomal linear Cluster_68 Bacilli_gi_481030309 hallmark;refseq 54;21;14;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae FSL S3-654 extrachromosomal linear Cluster_20 Bacilli_gi_481030547 hallmark;refseq 53;21;14;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae FSL S3-034 extrachromosomal linear Cluster_20 Bacilli_gi_481030601 hallmark;refseq 15;13;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae FSL S3-034 extrachromosomal linear Cluster_68 Bacilli_gi_481030641-350-39095 hallmark;refseq 43;21;7;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae FSL S3-608 prophage linear Cluster_20 Bacilli_gi_481030684 hallmark;refseq 31;24;2;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae FSL S3-608 extrachromosomal linear Cluster_68 Bacilli_gi_481030819-8255-50073 hallmark;refseq 47;21;8;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae LMG 14747 prophage linear Cluster_20 Bacilli_gi_481030874 hallmark;refseq;vdb 53;21;14;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae LMG 14747 extrachromosomal linear Cluster_20 Bacilli_gi_481030940 hallmark;refseq 50;20;13;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae STIR-CD-01 extrachromosomal linear Cluster_20 Bacilli_gi_481030972 hallmark;refseq 44;26;3;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae FSL S3-062 extrachromosomal linear Cluster_30 Bacilli_gi_481031090-9622-51044 hallmark;refseq 42;21;10;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae MRI Z1-205 prophage linear Cluster_20 Bacilli_gi_481031108-494107-530520 hallmark;refseq 60;38;;22 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae MRI Z1-204 prophage linear Cluster_65 Bacilli_gi_481031290-10600-42061 hallmark;refseq 45;32;3;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae GB01003 prophage linear Cluster_166 Bacilli_gi_481031361 hallmark;refseq;vdb 52;29;14;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae GB00965 extrachromosomal linear Cluster_62 Bacilli_gi_481031398-68858-104967 hallmark;refseq 49;37;2;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae GB00963 prophage linear Cluster_88 Bacilli_gi_481031461-7548-45586 hallmark;refseq 64;40;6;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;C2likevirus;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae GB00954 prophage linear Cluster_62 Bacilli_gi_481031519 refseq;vdb 14;4;8;2 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae GB00954 extrachromosomal linear Cluster_500 Bacilli_gi_481031635-91148-123376 hallmark;refseq 47;33;6;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae GB00919 prophage linear Cluster_30 Bacilli_gi_481031663 hallmark;refseq 17;16;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae GB00900 extrachromosomal linear Cluster_68 Bacilli_gi_481031687-841-44503 hallmark;refseq 44;21;9;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae GB00900 prophage linear Cluster_20 Bacilli_gi_481031689 refseq 22;11;5;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae GB00900 extrachromosomal linear Cluster_62 Bacilli_gi_481031694 hallmark;refseq 18;14;;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae GB00900 extrachromosomal linear Cluster_30 Bacilli_gi_481031704-0-30951 hallmark;refseq 45;32;3;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae GB00900 prophage linear Cluster_166 Bacilli_gi_482599575 hallmark;refseq 49;22;12;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae PR06 extrachromosomal linear Cluster_20 Bacilli_gi_483257455 hallmark;refseq 73;30;17;26 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Lactococcus Lactococcus garvieae I113 extrachromosomal linear Cluster_195 Bacilli_gi_483380334-0-25984 hallmark;refseq 38;28;3;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus cecorum DSM 20682 = ATCC 43198 prophage linear Cluster_57 Bacilli_gi_483401861 hallmark;refseq 28;18;1;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Paenibacillaceae;Brevibacillus Brevibacillus brevis FJAT-0809-GLX extrachromosomal linear Cluster_29 Bacilli_gi_483535096 hallmark;refseq 51;33;4;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus caballi DSM 19004 extrachromosomal circular Cluster_31 Bacilli_gi_483609091 hallmark;refseq 26;20;1;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus ovis DSM 16829 extrachromosomal linear Cluster_17 Bacilli_gi_483613946-212003-252391 hallmark;refseq 59;37;4;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus thoraltensis DSM 12221 prophage linear Cluster_88 Bacilli_gi_483984334 hallmark;refseq 65;57;4;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus epidermidis 12142587 extrachromosomal linear Cluster_8 Bacilli_gi_483992661 hallmark;refseq 35;24;4;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus licheniformis CGMCC 3963 extrachromosomal linear Cluster_6 Bacilli_gi_483992683 refseq 49;18;3;28 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;T4likevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus licheniformis CGMCC 3963 extrachromosomal linear Cluster_407 Bacilli_gi_483992709-116952-143462 hallmark;refseq 35;18;9;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus licheniformis CGMCC 3963 prophage linear Cluster_105 Bacilli_gi_483992947-10153-49378 refseq 62;36;2;24 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus licheniformis CGMCC 3963 prophage linear Cluster_253 Bacilli_gi_483993038 hallmark;refseq 19;14;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus licheniformis CGMCC 3963 extrachromosomal linear Cluster_55 Bacilli_gi_483993112 hallmark;refseq 19;17;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus licheniformis CGMCC 3963 extrachromosomal linear Cluster_55 Bacilli_gi_484000369 hallmark;refseq;vdb 43;15;18;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus acidiproducens DSM 23148 extrachromosomal linear Cluster_42 Bacilli_gi_484000434 hallmark;refseq 50;31;3;16 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus acidiproducens DSM 23148 extrachromosomal circular Cluster_145 Bacilli_gi_484002915-0-51593 hallmark;refseq 90;36;9;45 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Paenibacillaceae;Brevibacillus Brevibacillus laterosporus DSM 25 prophage linear Cluster_15 Bacilli_gi_484009374 hallmark 15;5;5;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecium LCT-EF20 extrachromosomal linear Cluster_336 Bacilli_gi_484009523-0-25503 hallmark;refseq 47;26;5;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecium LCT-EF20 prophage linear Cluster_41 Bacilli_gi_484009620 hallmark 15;5;5;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecium LCT-EF258 extrachromosomal linear Cluster_336 Bacilli_gi_484019068 hallmark;refseq 24;18;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus sp. 105MF extrachromosomal linear Cluster_135 Bacilli_gi_484019240 refseq 33;20;2;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus sp. 105MF extrachromosomal linear Cluster_116 Bacilli_gi_484028336 hallmark 79;22;10;47 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Paenibacillaceae;Brevibacillus Brevibacillus massiliensis extrachromosomal linear Cluster_526 Bacilli_gi_484031409 hallmark;refseq 25;20;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus delphini 8086 extrachromosomal linear Cluster_56 Bacilli_gi_484031751 hallmark;refseq 38;33;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus delphini 8086 extrachromosomal linear Cluster_49 Bacilli_gi_484032088 hallmark 28;10;1;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus sp. WBUNB009 extrachromosomal linear Cluster_150 Bacilli_gi_484032490 hallmark;refseq 78;46;8;24 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus intermedius NCTC 11048 extrachromosomal linear Cluster_8 Bacilli_gi_484032532 hallmark;refseq 22;21;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus intermedius NCTC 11048 extrachromosomal linear Cluster_40 Bacilli_gi_484033855 hallmark;refseq 44;18;3;23 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Punalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus sp. WBUNB004 extrachromosomal linear Cluster_150 Bacilli_gi_484050443 hallmark;refseq 62;48;4;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus warneri A487 extrachromosomal linear Cluster_8 Bacilli_gi_484065296 hallmark;vdb 14;3;2;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Gracilibacillus Gracilibacillus lacisalsi DSM 19029 extrachromosomal linear Cluster_76 Bacilli_gi_484065322 hallmark;refseq 15;9;;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Gracilibacillus Gracilibacillus lacisalsi DSM 19029 extrachromosomal linear Cluster_6 Bacilli_gi_484068245 hallmark 15;5;5;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecium LCT-EF90 extrachromosomal linear Cluster_336 Bacilli_gi_484068390-0-22143 hallmark;refseq 43;21;5;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecium LCT-EF90 prophage linear Cluster_41 Bacilli_gi_484070739 hallmark;refseq 79;33;18;28 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus subtilis S1-4 extrachromosomal linear Cluster_105 Bacilli_gi_484070808 hallmark 35;12;14;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus subtilis S1-4 extrachromosomal linear Cluster_105 Bacilli_gi_484070851 hallmark 32;8;7;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Spbetalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus subtilis S1-4 extrachromosomal linear Cluster_167 Bacilli_gi_484070873 refseq 12;7;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;T4likevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Sporolactobacillaceae;Sporolactobacillus Sporolactobacillus vineae DSM 21990 = SL153 extrachromosomal linear Cluster_564 Bacilli_gi_484078956 hallmark;refseq 99;41;9;49 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus licheniformis 10-1-A extrachromosomal circular Cluster_407 Bacilli_gi_484080317 hallmark 54;19;9;26 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Paenibacillaceae;Paenibacillus Paenibacillus daejeonensis DSM 15491 extrachromosomal linear Cluster_48 Bacilli_gi_484080341 hallmark 46;18;8;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Paenibacillaceae;Paenibacillus Paenibacillus daejeonensis DSM 15491 extrachromosomal linear Cluster_48 Bacilli_gi_484086219-17820-51091 hallmark;refseq;vdb 49;26;10;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Phic3unalikevirus;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecium C309 prophage linear Cluster_32 Bacilli_gi_484086256 hallmark;refseq 35;19;5;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Punalikevirus;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecium C309 extrachromosomal linear Cluster_222 Bacilli_gi_484104960 hallmark;refseq 69;44;5;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus xylosus NJ extrachromosomal linear Cluster_6 Bacilli_gi_484105572-0-37570 hallmark;refseq 69;35;8;26 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus sp. L1(2012) prophage linear Cluster_135 Bacilli_gi_484174861 hallmark 28;2;1;25 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Lysinibacillus Lysinibacillus boronitolerans F1182 extrachromosomal linear unclustered Bacilli_gi_484215963 refseq 30;15;2;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus casei UW4 extrachromosomal linear Cluster_133 Bacilli_gi_484215987 hallmark;refseq 15;8;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus casei UW4 extrachromosomal linear Cluster_32 Bacilli_gi_484229681 hallmark;refseq 21;20;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus sp. JGI 0001002-I23 extrachromosomal linear Cluster_35 Bacilli_gi_484233207 hallmark 31;13;5;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Alicyclobacillaceae;Alicyclobacillus Alicyclobacillus pohliae DSM 22757 extrachromosomal linear Cluster_42 Bacilli_gi_484234828 hallmark;refseq 27;22;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus minor DSM 17118 extrachromosomal linear Cluster_17 Bacilli_gi_484234829 hallmark;refseq 30;25;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus minor DSM 17118 extrachromosomal linear Cluster_68 Bacilli_gi_484266562 hallmark;refseq 33;24;3;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus hominis subsp. hominis ZBW5 extrachromosomal linear Cluster_40 Bacilli_gi_484266671 hallmark;refseq 37;32;;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus hominis subsp. hominis ZBW5 extrachromosomal linear Cluster_35 Bacilli_gi_484970147 refseq 23;14;1;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Lactococcus Lactococcus garvieae TB25 extrachromosomal linear Cluster_199 Bacilli_gi_484970357 hallmark;refseq 17;15;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Lactococcus Lactococcus garvieae LG9 extrachromosomal linear Cluster_32 Bacilli_gi_484970370 hallmark;refseq 22;16;1;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Lactococcus Lactococcus garvieae LG9 extrachromosomal linear Cluster_30 Bacilli_gi_484970437 hallmark;refseq 23;19;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Lactococcus Lactococcus garvieae LG9 extrachromosomal linear Cluster_157 Bacilli_gi_485035020 hallmark;refseq 64;35;3;26 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus reuteri mlc3 extrachromosomal linear Cluster_157 Bacilli_gi_485035154 hallmark;refseq 75;36;5;34 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus reuteri lpuph extrachromosomal linear Cluster_29 Bacilli_gi_485038625-72012-92454 hallmark;vdb 30;8;13;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus subtilis gtP20b prophage linear Cluster_105 Bacilli_gi_485038658 hallmark;refseq 50;34;2;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Phic3unalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus subtilis gtP20b extrachromosomal linear Cluster_55 Bacilli_gi_485038661 hallmark 28;11;6;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus subtilis gtP20b extrachromosomal linear Cluster_105 Bacilli_gi_485053901 hallmark;refseq 24;23;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes BJCYGAS15 extrachromosomal linear Cluster_70 Bacilli_gi_485053981-68970-105435 hallmark;refseq 46;42;;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes HLJGAS12011 prophage linear Cluster_70 Bacilli_gi_485053997 hallmark;refseq 24;20;;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes HLJGAS12011 extrachromosomal linear Cluster_68 Bacilli_gi_485054001 hallmark;refseq 21;19;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes HLJGAS12011 extrachromosomal linear Cluster_90 Bacilli_gi_485054040-48200-89383 hallmark;refseq 59;43;7;9 Viruses;unclassified;unclassified;unclassified;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes HLJGAS12011 prophage linear Cluster_115 Bacilli_gi_485054371 hallmark;refseq 72;30;8;34 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Paenibacillaceae;Paenibacillus Paenibacillus sp. OSY-SE extrachromosomal linear Cluster_67 Bacilli_gi_485061803-56845-97572 hallmark;refseq 64;46;4;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus sp. AL1 prophage linear Cluster_8 Bacilli_gi_485065228-0-16087 hallmark;refseq 36;22;2;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Lactococcus Lactococcus garvieae 21881 prophage linear Cluster_195 Bacilli_gi_485065280-0-31990 hallmark;refseq 42;32;2;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Lactococcus Lactococcus garvieae 8831 prophage linear Cluster_70 Bacilli_gi_485066273-238-40694 hallmark;refseq 68;40;6;22 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Lactococcus Lactococcus garvieae UNIUD074 prophage linear Cluster_195 Bacilli_gi_485066299 hallmark;refseq 39;25;3;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Lactococcus Lactococcus garvieae UNIUD074 extrachromosomal linear Cluster_32 Bacilli_gi_485069829-387-25180 hallmark;refseq;vdb 31;19;4;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Paenibacillaceae;Paenibacillus Paenibacillus ginsengihumi DSM 21568 prophage linear Cluster_55 Bacilli_gi_485455515 refseq 113;73;5;35 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Spbetalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus subtilis subsp. subtilis str. AUSI98 extrachromosomal linear Cluster_253 Bacilli_gi_485455557-35926-67504 hallmark;refseq 34;19;4;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus subtilis subsp. subtilis str. AUSI98 prophage linear Cluster_55 Bacilli_gi_485455564 hallmark;refseq 77;36;17;24 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus subtilis subsp. subtilis str. AUSI98 extrachromosomal linear Cluster_105 Bacilli_gi_485455588 hallmark;refseq 76;30;17;29 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus subtilis subsp. spizizenii DV1-B-1 extrachromosomal linear Cluster_105 Bacilli_gi_485684761 refseq;vdb 10;3;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus sobrinus TCI-9 extrachromosomal linear Cluster_350 Bacilli_gi_485750259 refseq;vdb 9;2;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus sobrinus TCI-119 extrachromosomal linear Cluster_350 Bacilli_gi_486200690-998832-1046281 hallmark;refseq 66;63;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus HI049 prophage linear Cluster_6 Bacilli_gi_486203361-2252648-2300097 hallmark;refseq 66;63;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus HI010 prophage linear Cluster_6 Bacilli_gi_486205205-998718-1046167 hallmark;refseq 66;63;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus HI049B prophage linear Cluster_6 Bacilli_gi_486205975-102478-144440 hallmark;refseq 57;54;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus HI010B prophage linear Cluster_6 Bacilli_gi_486209995-1512562-1560011 hallmark;refseq 66;63;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus HI022 prophage linear Cluster_6 Bacilli_gi_486211608-1533765-1581214 hallmark;refseq 66;63;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus HI049C prophage linear Cluster_6 Bacilli_gi_486213000-986335-1033784 hallmark;refseq 66;63;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus HI168 prophage linear Cluster_6 Bacilli_gi_486214133-1220016-1267413 hallmark;refseq 66;63;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus HI111 prophage linear Cluster_6 Bacilli_gi_486215615-1000089-1047538 hallmark;refseq 66;63;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus HI013 prophage linear Cluster_6 Bacilli_gi_486217544-11604-30218 hallmark;refseq 41;40;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0001 prophage linear Cluster_8 Bacilli_gi_486217704 hallmark;refseq 21;20;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0001 extrachromosomal linear Cluster_35 Bacilli_gi_486217781 hallmark;refseq 22;22;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0001 extrachromosomal linear Cluster_35 Bacilli_gi_486217861 refseq 28;26;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0001 extrachromosomal linear Cluster_6 Bacilli_gi_486217883 hallmark;refseq 28;27;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0001 extrachromosomal linear Cluster_6 Bacilli_gi_486225786-1724326-1770328 hallmark;refseq 68;63;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0029 prophage linear Cluster_6 Bacilli_gi_486232687-84-26430 hallmark;refseq 29;28;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0045 prophage linear Cluster_49 Bacilli_gi_486237704-1056260-1099853 hallmark;refseq 61;56;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0066 prophage linear Cluster_6 Bacilli_gi_486237704-710660-752358 hallmark;refseq 65;62;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0066 prophage linear Cluster_49 Bacilli_gi_486239304-221791-266903 hallmark;refseq 65;62;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0102 prophage linear Cluster_6 Bacilli_gi_486246367-1020677-1065466 hallmark;refseq 63;59;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0103 prophage linear Cluster_6 Bacilli_gi_486251531-2090991-2136030 hallmark;refseq 59;58;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0150 prophage linear Cluster_8 Bacilli_gi_486253298-0-40813 hallmark;refseq 63;57;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0173 prophage linear Cluster_8 Bacilli_gi_486253298-1767307-1786352 hallmark;refseq 42;41;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0173 prophage linear Cluster_8 Bacilli_gi_486256732-1899769-1932801 hallmark;refseq 24;20;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0197 prophage linear Cluster_8 Bacilli_gi_486257669-131915-176632 hallmark;refseq 53;50;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0197 prophage linear Cluster_49 Bacilli_gi_486259720-2433276-2478018 hallmark;refseq 64;60;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0221 prophage linear Cluster_6 Bacilli_gi_486261107-307995-353272 hallmark;refseq 63;58;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0237 prophage linear Cluster_6 Bacilli_gi_486268272-1024054-1068444 hallmark;refseq 53;48;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0326 prophage linear Cluster_6 Bacilli_gi_486271607-329598-354877 hallmark;refseq 51;49;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0328 prophage linear Cluster_8 Bacilli_gi_486272254-438474-482737 hallmark;refseq 63;60;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0328 prophage linear Cluster_6 Bacilli_gi_486274654-644418-689751 hallmark;refseq 65;61;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0329 prophage linear Cluster_6 Bacilli_gi_486275406-0-33936 hallmark;refseq 38;37;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0329 prophage linear Cluster_35 Bacilli_gi_486280931-2293934-2338991 hallmark;refseq 68;65;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0340 prophage linear Cluster_6 Bacilli_gi_486282563-305246-348038 hallmark;refseq 60;57;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0347 prophage linear Cluster_6 Bacilli_gi_486290526 hallmark;refseq 23;22;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0391 extrachromosomal linear Cluster_35 Bacilli_gi_486291032-147451-192385 hallmark;refseq 64;60;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0391 prophage linear Cluster_6 Bacilli_gi_486291809-880083-911464 hallmark;refseq 38;36;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0391 prophage linear Cluster_49 Bacilli_gi_486302143-485037-530298 hallmark;refseq 64;59;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0450 prophage linear Cluster_6 Bacilli_gi_486306261-0-18096 hallmark;refseq 33;29;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0467 prophage linear Cluster_8 Bacilli_gi_486307196-1447166-1466605 hallmark;refseq 42;41;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0467 prophage linear Cluster_8 Bacilli_gi_486310012-1045449-1089786 hallmark;refseq 62;58;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0468 prophage linear Cluster_6 Bacilli_gi_486313128-435733-479781 hallmark;refseq 61;58;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0478 prophage linear Cluster_6 Bacilli_gi_486318205-371538-414474 hallmark;refseq 64;57;3;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0489 prophage linear Cluster_8 Bacilli_gi_486320731-970691-1016277 hallmark;refseq 67;63;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0494 prophage linear Cluster_6 Bacilli_gi_486330251-0-17684 hallmark;refseq 37;35;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus B40950 prophage linear Cluster_8 Bacilli_gi_486331620-322407-362331 hallmark;refseq 64;63;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus B147830 prophage linear Cluster_8 Bacilli_gi_486337440-0-30201 hallmark;refseq 39;38;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0528 prophage linear Cluster_8 Bacilli_gi_486339825-0-32383 hallmark;refseq 42;39;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0528 prophage linear Cluster_49 Bacilli_gi_486339825-456217-502792 hallmark;refseq 62;58;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0528 prophage linear Cluster_6 Bacilli_gi_486342614-987388-1033640 hallmark;refseq 65;62;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0531 prophage linear Cluster_6 Bacilli_gi_486345866-288168-332987 hallmark;refseq 59;55;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0536 prophage linear Cluster_6 Bacilli_gi_486347448-423187-466864 hallmark;refseq 60;56;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0539 prophage linear Cluster_6 Bacilli_gi_486349175-324490-345960 hallmark;refseq 47;45;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0539 prophage linear Cluster_8 Bacilli_gi_486349305 hallmark;refseq 14;14;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0539 extrachromosomal linear Cluster_35 Bacilli_gi_486352271-425835-471887 hallmark;refseq 66;62;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0547 prophage linear Cluster_6 Bacilli_gi_486354656 hallmark;refseq 23;23;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0565 extrachromosomal linear Cluster_35 Bacilli_gi_486357261-1452951-1471208 hallmark;refseq 42;41;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0580 prophage linear Cluster_8 Bacilli_gi_486358833-0-28359 hallmark;refseq 34;33;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0602 prophage linear Cluster_35 Bacilli_gi_486358833-148270-180128 hallmark;refseq 56;54;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0602 prophage linear Cluster_8 Bacilli_gi_486359560-309057-353319 hallmark;refseq 64;61;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0602 prophage linear Cluster_6 Bacilli_gi_486361222-340666-358938 hallmark;refseq 42;41;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0622 prophage linear Cluster_8 Bacilli_gi_486365630-22-30112 hallmark;refseq 39;38;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0687 prophage linear Cluster_8 Bacilli_gi_486366366-346112-389889 hallmark;refseq 64;60;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0687 prophage linear Cluster_8 Bacilli_gi_486366366-813081-858830 hallmark;refseq 69;66;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0687 prophage linear Cluster_6 Bacilli_gi_486369161-324610-349683 hallmark;refseq 53;52;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0692 prophage linear Cluster_8 Bacilli_gi_486369358 hallmark;refseq 12;12;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0692 extrachromosomal linear Cluster_35 Bacilli_gi_486375972-323916-342537 hallmark;refseq 42;41;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0780 prophage linear Cluster_8 Bacilli_gi_486376414 hallmark;refseq 24;24;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0780 extrachromosomal linear Cluster_35 Bacilli_gi_486377135-0-18372 hallmark;refseq 40;37;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0780 prophage linear Cluster_8 Bacilli_gi_486379833-333032-378331 hallmark;refseq 73;70;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0799 prophage linear Cluster_35 Bacilli_gi_486380307-121888-170184 hallmark;refseq 55;53;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0799 prophage linear Cluster_8 Bacilli_gi_486380307-474129-519080 hallmark;refseq 56;52;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0799 prophage linear Cluster_6 Bacilli_gi_486383324-121181-167112 hallmark;refseq 61;59;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0823 prophage linear Cluster_49 Bacilli_gi_486383324-471057-516529 hallmark;refseq 54;48;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0823 prophage linear Cluster_6 Bacilli_gi_486385588-2250358-2294564 hallmark;refseq 63;59;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0844 prophage linear Cluster_6 Bacilli_gi_486388784-204-29714 hallmark;refseq 39;38;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0934 prophage linear Cluster_35 Bacilli_gi_486388784-503685-545967 hallmark;refseq 59;54;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0934 prophage linear Cluster_6 Bacilli_gi_486390443-373942-392795 hallmark;refseq 40;39;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0943 prophage linear Cluster_8 Bacilli_gi_486393915-1423983-1468246 hallmark;refseq 63;60;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0944 prophage linear Cluster_6 Bacilli_gi_486399931-0-18255 hallmark;refseq 40;37;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0999 prophage linear Cluster_8 Bacilli_gi_486401503-1052744-1097802 hallmark;refseq 67;64;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1007 prophage linear Cluster_6 Bacilli_gi_486402553-591873-635933 hallmark;refseq 60;58;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1010 prophage linear Cluster_8 Bacilli_gi_486404951-425888-470641 hallmark;refseq 64;60;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1015 prophage linear Cluster_6 Bacilli_gi_486405783-206161-263084 hallmark;refseq 100;96;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1016 prophage linear Cluster_8 Bacilli_gi_486407993-453599-499276 hallmark;refseq 66;61;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1036 prophage linear Cluster_6 Bacilli_gi_486409007-0-30736 hallmark;refseq 45;26;4;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Salinicoccus Salinicoccus albus DSM 19776 prophage linear Cluster_49 Bacilli_gi_486409891-325322-343595 hallmark;refseq 42;41;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1037 prophage linear Cluster_8 Bacilli_gi_486410955 hallmark;refseq 22;22;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1037 extrachromosomal linear Cluster_35 Bacilli_gi_486411563-0-17897 hallmark;refseq 36;32;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1037 prophage linear Cluster_8 Bacilli_gi_486414273-430399-465165 hallmark;refseq 46;43;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0529 prophage linear Cluster_6 Bacilli_gi_486416208-1621961-1646087 hallmark;refseq 50;48;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1063 prophage linear Cluster_8 Bacilli_gi_486416926-121500-170172 hallmark;refseq 59;57;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1063 prophage linear Cluster_8 Bacilli_gi_486416926-474116-521019 hallmark;refseq 55;51;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1063 prophage linear Cluster_6 Bacilli_gi_486417634-1059805-1104068 hallmark;refseq 63;60;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1076 prophage linear Cluster_6 Bacilli_gi_486420802-1057247-1102312 hallmark;refseq 62;59;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1064 prophage linear Cluster_6 Bacilli_gi_486422720-222938-273630 hallmark;refseq 54;53;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1092 prophage linear Cluster_35 Bacilli_gi_486423861-0-25232 hallmark;refseq 33;31;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1093 prophage linear Cluster_56 Bacilli_gi_486425960-590503-628296 hallmark;refseq 60;57;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1095 prophage linear Cluster_8 Bacilli_gi_486426334-426617-472192 hallmark;refseq 66;62;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1095 prophage linear Cluster_6 Bacilli_gi_486429182-432066-476328 hallmark;refseq 63;60;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1103 prophage linear Cluster_6 Bacilli_gi_486431063-435247-491732 hallmark;refseq 73;67;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1119 prophage linear Cluster_6 Bacilli_gi_486431800-325356-343629 hallmark;refseq 42;41;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1167 prophage linear Cluster_8 Bacilli_gi_486432357 hallmark;refseq 24;24;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1167 extrachromosomal linear Cluster_35 Bacilli_gi_486432394 hallmark;refseq 38;32;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1167 extrachromosomal linear Cluster_8 Bacilli_gi_486434630-2087272-2130538 hallmark;refseq 68;65;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1170 prophage linear Cluster_8 Bacilli_gi_486434630-2434683-2478945 hallmark;refseq 63;60;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1170 prophage linear Cluster_6 Bacilli_gi_486435663 refseq 10;10;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1198 extrachromosomal linear Cluster_35 Bacilli_gi_486436221-0-17758 hallmark;refseq 39;36;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1198 prophage linear Cluster_8 Bacilli_gi_486436221-1737888-1756306 hallmark;refseq 42;41;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1198 prophage linear Cluster_8 Bacilli_gi_486447954-554482-604802 hallmark;refseq 75;69;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1199 prophage linear Cluster_6 Bacilli_gi_486506047-2809182-2827455 hallmark;refseq 42;41;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1215 prophage linear Cluster_8 Bacilli_gi_486624733-0-17758 hallmark;refseq 38;35;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1229 prophage linear Cluster_8 Bacilli_gi_486644648-324972-343189 hallmark;refseq 41;40;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1248 prophage linear Cluster_8 Bacilli_gi_486651308-0-19061 hallmark;refseq 38;34;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1248 prophage linear Cluster_8 Bacilli_gi_486651351 refseq 10;10;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1248 extrachromosomal linear Cluster_35 Bacilli_gi_486669659-1912839-1957773 hallmark;refseq 64;60;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1253 prophage linear Cluster_6 Bacilli_gi_486684463-322477-364110 hallmark;refseq 61;59;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1255 prophage linear Cluster_8 Bacilli_gi_486684463-583746-627120 hallmark;refseq 66;63;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1255 prophage linear Cluster_8 Bacilli_gi_486739869-328827-379499 hallmark;refseq 65;64;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1277 prophage linear Cluster_8 Bacilli_gi_486787193-372762-390703 hallmark;refseq 38;37;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1291 prophage linear Cluster_8 Bacilli_gi_486915382-326464-360536 hallmark;refseq 59;58;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1321 prophage linear Cluster_8 Bacilli_gi_486919067-243461-268026 hallmark;refseq 36;31;5; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1321 prophage linear Cluster_8 Bacilli_gi_486924102-431970-477497 hallmark;refseq 67;64;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1321 prophage linear Cluster_6 Bacilli_gi_486956393-2572595-2596578 hallmark;refseq 49;48;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1322 prophage linear Cluster_8 Bacilli_gi_486986178-0-19017 hallmark;refseq 30;27;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1359 prophage linear Cluster_8 Bacilli_gi_487027023-1014144-1059805 hallmark;refseq 68;64;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1367 prophage linear Cluster_6 Bacilli_gi_487083277-0-18105 hallmark;refseq 34;29;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1394 prophage linear Cluster_8 Bacilli_gi_487132426 hallmark;refseq 23;23;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1450 extrachromosomal linear Cluster_35 Bacilli_gi_487135036-0-17800 hallmark;refseq 39;36;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1450 prophage linear Cluster_8 Bacilli_gi_487135576-1040655-1082111 hallmark;refseq 64;61;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1462 prophage linear Cluster_8 Bacilli_gi_487135933-325233-343507 hallmark;refseq 42;41;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1463 prophage linear Cluster_8 Bacilli_gi_487136278 hallmark;refseq 23;23;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1463 extrachromosomal linear Cluster_35 Bacilli_gi_487136831 hallmark;refseq 13;13;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1481 extrachromosomal linear Cluster_35 Bacilli_gi_487137167-2095986-2139819 hallmark;refseq 62;59;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1520 prophage linear Cluster_6 Bacilli_gi_487137439-425721-469554 hallmark;refseq 62;59;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1521 prophage linear Cluster_6 Bacilli_gi_487137481 hallmark;refseq 24;21;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1521 extrachromosomal linear Cluster_8 Bacilli_gi_487137976 hallmark;refseq 65;62;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1531 extrachromosomal circular Cluster_6 Bacilli_gi_487139035-528695-574105 hallmark;refseq 66;62;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1544 prophage linear Cluster_6 Bacilli_gi_487139555-831776-849906 hallmark;refseq 41;39;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1556 prophage linear Cluster_8 Bacilli_gi_487139757 hallmark;refseq 23;23;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1556 extrachromosomal linear Cluster_35 Bacilli_gi_487146604-519658-564769 hallmark;refseq 64;61;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1563 prophage linear Cluster_6 Bacilli_gi_487186501-2190637-2210091 hallmark;refseq 39;35;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1565 prophage linear Cluster_8 Bacilli_gi_487189945-425722-469601 hallmark;refseq 62;59;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1565 prophage linear Cluster_6 Bacilli_gi_487223404-0-18255 hallmark;refseq 40;37;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1578 prophage linear Cluster_8 Bacilli_gi_487258816-327462-362881 hallmark;refseq 59;58;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0006 prophage linear Cluster_8 Bacilli_gi_487267757-459762-504221 hallmark;refseq 57;53;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0006 prophage linear Cluster_6 Bacilli_gi_487290252-1496548-1541603 hallmark;refseq 66;63;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0055 prophage linear Cluster_6 Bacilli_gi_487336408-423187-453629 hallmark;refseq 33;32;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0060 prophage linear Cluster_6 Bacilli_gi_487344359 hallmark;refseq;vdb 95;67;20;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0060 extrachromosomal linear Cluster_6 Bacilli_gi_487350114-1022108-1066573 hallmark;refseq 60;55;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0077 prophage linear Cluster_6 Bacilli_gi_487356577-324326-351843 hallmark;refseq 55;54;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0108 prophage linear Cluster_8 Bacilli_gi_487358582-234515-261713 hallmark;refseq 50;46;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0108 prophage linear Cluster_8 Bacilli_gi_487359205-424273-469712 hallmark;refseq 66;62;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0144 prophage linear Cluster_6 Bacilli_gi_487360092-0-19283 hallmark;refseq 42;39;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0177 prophage linear Cluster_8 Bacilli_gi_487360444 refseq 14;12;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0200 extrachromosomal linear Cluster_49 Bacilli_gi_487360555-1022054-1066374 hallmark;refseq 59;56;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0200 prophage linear Cluster_6 Bacilli_gi_487360877-487377-532310 hallmark;refseq 64;60;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0212 prophage linear Cluster_6 Bacilli_gi_487362212-2554340-2598827 hallmark;refseq 63;60;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0250 prophage linear Cluster_6 Bacilli_gi_487362493 hallmark;refseq 13;13;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0280 extrachromosomal linear Cluster_35 Bacilli_gi_487362514-235319-254743 hallmark;refseq 39;35;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0280 prophage linear Cluster_8 Bacilli_gi_487362590-427393-471655 hallmark;refseq 63;60;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0280 prophage linear Cluster_6 Bacilli_gi_487362733-1690907-1712151 hallmark;refseq 45;44;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0280 prophage linear Cluster_8 Bacilli_gi_487363159-987930-1032864 hallmark;refseq 64;60;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0306 prophage linear Cluster_6 Bacilli_gi_487363558 refseq 21;20;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0334 extrachromosomal linear Cluster_8 Bacilli_gi_487363716-1025117-1069410 hallmark;refseq 58;53;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0334 prophage linear Cluster_6 Bacilli_gi_487364069-2183118-2234070 hallmark;refseq 65;61;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0350 prophage linear Cluster_6 Bacilli_gi_487364822-900972-945906 hallmark;refseq 64;60;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0363 prophage linear Cluster_6 Bacilli_gi_487365191-2414908-2461579 hallmark;refseq 68;63;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0367 prophage linear Cluster_6 Bacilli_gi_487365551-1572752-1591676 hallmark;refseq 42;41;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0374 prophage linear Cluster_8 Bacilli_gi_487365933-324939-365027 hallmark;refseq 64;63;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0375 prophage linear Cluster_8 Bacilli_gi_487366006-423187-468150 hallmark;refseq 58;53;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0375 prophage linear Cluster_6 Bacilli_gi_487367492-566331-611583 hallmark;refseq 67;64;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0396 prophage linear Cluster_6 Bacilli_gi_487368144-1059290-1104348 hallmark;refseq 67;64;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0424 prophage linear Cluster_6 Bacilli_gi_487369026-1061131-1107017 hallmark;refseq 65;59;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0510 prophage linear Cluster_6 Bacilli_gi_487369026-593343-637673 hallmark;refseq 49;46;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0510 prophage linear Cluster_8 Bacilli_gi_487369849-163132-210386 hallmark;refseq 68;64;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0513 prophage linear Cluster_6 Bacilli_gi_487370246-0-17732 hallmark;refseq 37;34;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0562 prophage linear Cluster_8 Bacilli_gi_487370688-2698584-2742859 hallmark;refseq 62;58;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0571 prophage linear Cluster_6 Bacilli_gi_487370984-1010441-1056257 hallmark;refseq 69;66;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0584 prophage linear Cluster_6 Bacilli_gi_487371607-1836442-1881810 hallmark;refseq 52;48;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0586 prophage linear Cluster_8 Bacilli_gi_487371607-2001721-2048918 hallmark;refseq 56;53;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0586 prophage linear Cluster_8 Bacilli_gi_487371925-1052191-1096904 hallmark;refseq 62;59;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0633 prophage linear Cluster_6 Bacilli_gi_487372667-408558-456003 hallmark;refseq 63;56;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0104 prophage linear Cluster_6 Bacilli_gi_487372667-48445-104613 hallmark;refseq 47;43;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0104 prophage linear Cluster_49 Bacilli_gi_487372846 refseq 13;10;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0171 extrachromosomal linear Cluster_223 Bacilli_gi_487372978-1019131-1066694 hallmark;refseq 64;60;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0171 prophage linear Cluster_6 Bacilli_gi_487374936-119357-162731 hallmark;refseq 73;71;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0270 prophage linear Cluster_49 Bacilli_gi_487374986-305326-335768 hallmark;refseq 33;32;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0270 prophage linear Cluster_6 Bacilli_gi_487375558-0-33462 hallmark;refseq 43;42;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0273 prophage linear Cluster_8 Bacilli_gi_487375990-1015243-1060533 hallmark;refseq 64;60;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0279 prophage linear Cluster_6 Bacilli_gi_487376330-1029229-1074156 hallmark;refseq 53;48;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0288 prophage linear Cluster_6 Bacilli_gi_487376936-1096510-1140907 hallmark;refseq 60;56;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0312 prophage linear Cluster_6 Bacilli_gi_487378643-9-25484 hallmark;refseq 29;29;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0404 prophage linear Cluster_49 Bacilli_gi_487378778-1015213-1046427 hallmark;refseq 36;34;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0404 prophage linear Cluster_6 Bacilli_gi_487379243-3037-46770 hallmark;refseq 55;52;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0415 prophage linear Cluster_6 Bacilli_gi_487379684-588006-630498 hallmark;refseq 64;61;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0455 prophage linear Cluster_8 Bacilli_gi_487379773-325129-344365 hallmark;refseq 42;41;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0460 prophage linear Cluster_8 Bacilli_gi_487379888 hallmark;refseq 23;23;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0460 extrachromosomal linear Cluster_35 Bacilli_gi_487379995-0-18615 hallmark;refseq 40;37;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0460 prophage linear Cluster_8 Bacilli_gi_487380761-1056644-1101899 hallmark;refseq 62;58;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0646 prophage linear Cluster_6 Bacilli_gi_487381120-570007-591140 hallmark;refseq 45;44;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0648 prophage linear Cluster_8 Bacilli_gi_487381382-423187-466730 hallmark;refseq 56;52;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0660 prophage linear Cluster_6 Bacilli_gi_487381527-374614-396216 hallmark;refseq 46;45;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0660 prophage linear Cluster_8 Bacilli_gi_487381565 hallmark;refseq 14;14;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0660 extrachromosomal linear Cluster_35 Bacilli_gi_487382034-325071-346204 hallmark;refseq 45;44;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0663 prophage linear Cluster_8 Bacilli_gi_487382141-423187-467878 hallmark;refseq 56;52;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0663 prophage linear Cluster_6 Bacilli_gi_487382376-825204-843477 hallmark;refseq 42;41;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0673 prophage linear Cluster_8 Bacilli_gi_487382633-0-18014 hallmark;refseq 35;31;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0673 prophage linear Cluster_8 Bacilli_gi_487382665 hallmark;refseq 20;20;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0673 extrachromosomal linear Cluster_35 Bacilli_gi_487382989-320136-341221 hallmark;refseq 45;44;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0792 prophage linear Cluster_8 Bacilli_gi_487383103-239456-259154 hallmark;refseq 21;14;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0792 prophage linear Cluster_8 Bacilli_gi_487383547-327083-346007 hallmark;refseq 42;41;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0822 prophage linear Cluster_8 Bacilli_gi_487383719 hallmark;refseq 24;24;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0822 extrachromosomal linear Cluster_35 Bacilli_gi_487384247-1053608-1098666 hallmark;refseq 67;64;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0831 prophage linear Cluster_6 Bacilli_gi_487385357-805326-848544 hallmark;refseq 67;63;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0877 prophage linear Cluster_8 Bacilli_gi_487385673-486958-531891 hallmark;refseq 64;60;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0892 prophage linear Cluster_6 Bacilli_gi_487386371-60-27622 hallmark;refseq 31;31;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0900 prophage linear Cluster_49 Bacilli_gi_487387237-325268-343542 hallmark;refseq 42;41;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0927 prophage linear Cluster_8 Bacilli_gi_487387530-0-17701 hallmark;refseq 39;36;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0927 prophage linear Cluster_8 Bacilli_gi_487387567 hallmark;refseq 23;23;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0927 extrachromosomal linear Cluster_35 Bacilli_gi_487388144-164722-211976 hallmark;refseq 68;64;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0946 prophage linear Cluster_6 Bacilli_gi_487388602-1010383-1054645 hallmark;refseq 63;60;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0964 prophage linear Cluster_6 Bacilli_gi_487390037 hallmark;refseq 54;53;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0978 extrachromosomal linear Cluster_8 Bacilli_gi_487390337-426909-472696 hallmark;refseq 65;61;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0978 prophage linear Cluster_6 Bacilli_gi_487390609-1009483-1055236 hallmark;refseq 66;62;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0994 prophage linear Cluster_6 Bacilli_gi_487391726-156879-202206 hallmark;refseq 66;62;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1034 prophage linear Cluster_6 Bacilli_gi_487392577-323514-341844 hallmark;refseq 42;41;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1044 prophage linear Cluster_8 Bacilli_gi_487392815-426730-471478 hallmark;refseq 64;60;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1044 prophage linear Cluster_6 Bacilli_gi_487393369 hallmark;refseq 20;20;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1061 extrachromosomal linear Cluster_49 Bacilli_gi_487393526 hallmark;refseq 28;27;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1061 extrachromosomal linear Cluster_8 Bacilli_gi_487393551 hallmark;refseq 61;57;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1061 extrachromosomal linear Cluster_6 Bacilli_gi_487394190 hallmark;refseq 21;20;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1062 extrachromosomal linear Cluster_35 Bacilli_gi_487394275-0-21275 hallmark;refseq 42;38;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1062 prophage linear Cluster_8 Bacilli_gi_487394397-327097-346021 hallmark;refseq 42;41;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1068 prophage linear Cluster_8 Bacilli_gi_487394509 hallmark;refseq 24;23;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1068 extrachromosomal linear Cluster_35 Bacilli_gi_487395159-124759-174343 hallmark;refseq 54;51;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1109 prophage linear Cluster_8 Bacilli_gi_487395342-1560354-1586002 hallmark;refseq 54;53;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1109 prophage linear Cluster_8 Bacilli_gi_487395760 hallmark;refseq 56;51;5; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1109 extrachromosomal linear Cluster_6 Bacilli_gi_487395891-325390-343930 hallmark;refseq 42;41;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1126 prophage linear Cluster_8 Bacilli_gi_487395966-0-18525 hallmark;refseq 35;32;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1126 prophage linear Cluster_8 Bacilli_gi_487396127-548304-590061 hallmark;refseq 60;56;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1142 prophage linear Cluster_8 Bacilli_gi_487396419-1048874-1093729 hallmark;refseq 62;59;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1223 prophage linear Cluster_6 Bacilli_gi_487396776 hallmark;refseq 21;21;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1224 extrachromosomal linear Cluster_35 Bacilli_gi_487397170-55-25454 hallmark;refseq 29;29;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1244 prophage linear Cluster_49 Bacilli_gi_487397585 hallmark;refseq 65;61;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1275 extrachromosomal linear Cluster_6 Bacilli_gi_487398265 refseq 26;20;6; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1286 extrachromosomal linear Cluster_223 Bacilli_gi_487398415-1026346-1071966 hallmark;refseq 69;64;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1309 prophage linear Cluster_6 Bacilli_gi_487398605-369899-388823 hallmark;refseq 42;41;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1374 prophage linear Cluster_8 Bacilli_gi_487398680 hallmark;refseq 24;24;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1374 extrachromosomal linear Cluster_35 Bacilli_gi_487398963-325312-344083 hallmark;refseq 42;41;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1405 prophage linear Cluster_8 Bacilli_gi_487399506-1088810-1135319 hallmark;refseq 61;55;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1510 prophage linear Cluster_6 Bacilli_gi_487399506-623295-665583 hallmark;refseq 63;62;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1510 prophage linear Cluster_8 Bacilli_gi_487399778 hallmark;refseq 23;22;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0075 extrachromosomal linear Cluster_35 Bacilli_gi_487399870-0-18546 hallmark;refseq 34;31;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0075 prophage linear Cluster_8 Bacilli_gi_487399870-1740162-1758941 hallmark;refseq 42;41;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0075 prophage linear Cluster_8 Bacilli_gi_487400143-561610-606909 hallmark;refseq 65;62;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M0294 prophage linear Cluster_6 Bacilli_gi_487400592-2314111-2355995 hallmark;refseq 59;56;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1060 prophage linear Cluster_6 Bacilli_gi_487401055-0-18721 hallmark;refseq 38;34;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1193 prophage linear Cluster_8 Bacilli_gi_487401372-996664-1040581 hallmark;refseq 64;60;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1228 prophage linear Cluster_6 Bacilli_gi_487401590-637598-683433 hallmark;refseq 70;63;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1407 prophage linear Cluster_6 Bacilli_gi_487401900-1059699-1103961 hallmark;refseq 63;60;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1466 prophage linear Cluster_6 Bacilli_gi_487401900-710773-755859 hallmark;refseq 66;63;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1466 prophage linear Cluster_8 Bacilli_gi_487633587-19493-48230 hallmark;vdb 37;15;14;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus subtilis PS216 prophage linear Cluster_105 Bacilli_gi_487638550-24494-64529 hallmark;refseq 64;38;5;21 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae 2009 prophage linear Cluster_50 Bacilli_gi_487643843 hallmark;refseq 60;37;3;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae 801 extrachromosomal linear Cluster_50 Bacilli_gi_487644099 hallmark;refseq 54;37;4;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae 801 extrachromosomal linear Cluster_31 Bacilli_gi_487648403 refseq 31;15;1;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae 845 extrachromosomal linear Cluster_50 Bacilli_gi_487648513 refseq 24;16;1;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae 845 extrachromosomal linear Cluster_50 Bacilli_gi_487650537 hallmark;refseq 31;30;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae 1488 extrachromosomal linear Cluster_52 Bacilli_gi_487650782 hallmark;refseq 21;13;2;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae 1488 extrachromosomal linear Cluster_30 Bacilli_gi_487659745 hallmark;refseq 23;14;3;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae 3051 extrachromosomal linear Cluster_50 Bacilli_gi_487659938 hallmark;refseq 24;20;;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae 3051 extrachromosomal linear Cluster_30 Bacilli_gi_488002700-5909-46744 hallmark;refseq 59;48;1;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus sp. MDS7B prophage linear Cluster_35 Bacilli_gi_493196425-1008037-1052479 hallmark;refseq 63;58;5; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus M1188 prophage linear Cluster_6 Bacilli_gi_493972587 hallmark;refseq 20;8;2;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus sp. GeD10 extrachromosomal linear Cluster_241 Bacilli_gi_493976631 hallmark;refseq 18;17;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus sp. GeD10 extrachromosomal linear Cluster_55 Bacilli_gi_493978186 hallmark;refseq 15;14;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus sp. GeD10 extrachromosomal linear Cluster_55 Bacilli_gi_493978660 hallmark 18;7;4;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus sp. GeD10 extrachromosomal circular Cluster_161 Bacilli_gi_493978813 hallmark;refseq 32;17;2;13 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus sp. GeD10 extrachromosomal linear Cluster_439 Bacilli_gi_493984344 hallmark;refseq 26;15;2;9 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus sp. GeD10 extrachromosomal linear Cluster_439 Bacilli_gi_493984999 hallmark;refseq 17;15;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus sp. GeD10 extrachromosomal linear Cluster_55 Bacilli_gi_493986589 refseq 23;15;;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus sp. GeD10 extrachromosomal linear Cluster_55 Bacilli_gi_493987063 hallmark;refseq 23;17;1;5 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus sp. GeD10 extrachromosomal linear Cluster_145 Bacilli_gi_49482253-1591396-1638650 hallmark;refseq 68;64;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus MRSA252 prophage linear Cluster_6 Bacilli_gi_49484912-981083-1025256 hallmark;refseq 63;58;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus MSSA476 prophage linear Cluster_6 Bacilli_gi_498824173-24-24160 hallmark;refseq 37;31;;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus pseudintermedius K7 prophage linear Cluster_56 Bacilli_gi_499123038 hallmark;refseq 46;41;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes 06BA18369 extrachromosomal linear Cluster_70 Bacilli_gi_499123200-0-40352 hallmark;refseq 61;47;4;10 Viruses;unclassified phages;;;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes 06BA18369 prophage linear Cluster_115 Bacilli_gi_499123209-0-30541 hallmark;refseq 47;46;1; Viruses;unclassified;unclassified;unclassified;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes 06BA18369 prophage linear Cluster_57 Bacilli_gi_499123212 hallmark;refseq 20;19;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes 06BA18369 extrachromosomal linear Cluster_90 Bacilli_gi_499133151 hallmark;refseq 43;17;7;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Lysinibacillus Lysinibacillus sphaericus OT4b.31 extrachromosomal linear Cluster_364 Bacilli_gi_499133295 hallmark;refseq;vdb 39;13;12;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Lysinibacillus Lysinibacillus sphaericus OT4b.31 extrachromosomal linear Cluster_220 Bacilli_gi_499134377 hallmark;refseq 22;21;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus 06BA18369 extrachromosomal linear Cluster_56 Bacilli_gi_499134378 hallmark;refseq 40;39;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus 06BA18369 extrachromosomal linear Cluster_40 Bacilli_gi_499134405 hallmark;refseq 36;34;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus 06BA18369 extrachromosomal linear Cluster_8 Bacilli_gi_499134412 hallmark;refseq 19;19;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus 06BA18369 extrachromosomal linear Cluster_49 Bacilli_gi_500215897-667957-700043 hallmark;refseq 42;39;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0065 prophage linear Cluster_17 Bacilli_gi_500218213-457850-494914 hallmark;refseq;vdb 57;39;2;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0062 prophage linear Cluster_30 Bacilli_gi_500219249-340805-382586 hallmark;refseq;vdb 68;62;1;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0061 prophage linear Cluster_332 Bacilli_gi_500220803 hallmark;refseq 20;17;;3 Viruses;unclassified phages;unknown;unknown;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0061 extrachromosomal linear Cluster_107 Bacilli_gi_500222154-775522-812732 hallmark;refseq 53;50;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0064 prophage linear Cluster_17 Bacilli_gi_500222525-283-37493 hallmark;refseq 53;50;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0064 prophage linear Cluster_17 Bacilli_gi_500754380-342141-385119 hallmark;refseq 66;52;1;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0075 prophage linear Cluster_41 Bacilli_gi_500827005-36026-73435 hallmark;refseq 53;50;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0079 prophage linear Cluster_17 Bacilli_gi_500897546-1522846-1565824 hallmark;refseq 66;52;1;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0081 prophage linear Cluster_41 Bacilli_gi_500937919-378094-422912 hallmark;refseq 69;43;7;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0067 prophage linear Cluster_29 Bacilli_gi_500940034-38633-75513 hallmark;refseq 54;49;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0067 prophage linear Cluster_17 Bacilli_gi_500950856-1166007-1210825 hallmark;refseq 69;43;7;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0068 prophage linear Cluster_29 Bacilli_gi_500950856-43168-80048 hallmark;refseq 55;50;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0068 prophage linear Cluster_17 Bacilli_gi_500957445-378895-423713 hallmark;refseq 69;43;7;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0069 prophage linear Cluster_29 Bacilli_gi_500958033-39347-76227 hallmark;refseq 55;50;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0069 prophage linear Cluster_17 Bacilli_gi_500967136-1680859-1725677 hallmark;refseq 69;43;7;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0070 prophage linear Cluster_29 Bacilli_gi_500967741-709531-746411 hallmark;refseq 55;50;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0070 prophage linear Cluster_17 Bacilli_gi_500976066-44041-80921 hallmark;refseq 55;50;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0106 prophage linear Cluster_17 Bacilli_gi_500976564-379979-424797 hallmark;refseq 69;43;7;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0106 prophage linear Cluster_29 Bacilli_gi_500981207-313242-350122 hallmark;refseq 55;50;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0088 prophage linear Cluster_17 Bacilli_gi_500982093-939786-984604 hallmark;refseq 69;43;7;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0088 prophage linear Cluster_29 Bacilli_gi_500982710 refseq 60;26;12;22 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0088 extrachromosomal circular Cluster_409 Bacilli_gi_500985022-1159204-1204022 hallmark;refseq 69;43;7;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0120 prophage linear Cluster_29 Bacilli_gi_500985022-36848-73728 hallmark;refseq 55;50;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0120 prophage linear Cluster_17 Bacilli_gi_500991358-1382331-1419211 hallmark;refseq 55;50;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0089 prophage linear Cluster_17 Bacilli_gi_500991358-2508999-2553817 hallmark;refseq 69;43;7;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0089 prophage linear Cluster_29 Bacilli_gi_500993436-40658-77538 hallmark;refseq 55;50;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0090 prophage linear Cluster_17 Bacilli_gi_500993990-377977-422795 hallmark;refseq 69;43;7;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0090 prophage linear Cluster_29 Bacilli_gi_500994984-33709-70589 hallmark;refseq 55;50;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0109 prophage linear Cluster_17 Bacilli_gi_500994986-374825-419643 hallmark;refseq 69;43;7;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0109 prophage linear Cluster_29 Bacilli_gi_500999071-40090-76970 hallmark;refseq 55;50;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0110 prophage linear Cluster_17 Bacilli_gi_500999935-380179-424997 hallmark;refseq 69;43;7;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0110 prophage linear Cluster_29 Bacilli_gi_501001041-38965-75845 hallmark;refseq 55;50;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0091 prophage linear Cluster_17 Bacilli_gi_501001043-379959-424777 hallmark;refseq 69;43;7;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0091 prophage linear Cluster_29 Bacilli_gi_501001074 refseq 60;26;12;22 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0091 extrachromosomal circular Cluster_409 Bacilli_gi_501001117-43434-80314 hallmark;refseq 55;50;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0092 prophage linear Cluster_17 Bacilli_gi_501001214-378266-423084 hallmark;refseq 69;43;7;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0092 prophage linear Cluster_29 Bacilli_gi_501003024-33714-70594 hallmark;refseq 55;50;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0085 prophage linear Cluster_17 Bacilli_gi_501003765-953629-998447 hallmark;refseq 69;43;7;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0085 prophage linear Cluster_29 Bacilli_gi_501007686-0-29277 hallmark;refseq 43;33;2;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0335 prophage linear Cluster_17 Bacilli_gi_501009352-38808-75688 hallmark;refseq 55;50;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0111 prophage linear Cluster_17 Bacilli_gi_501010152-954557-999375 hallmark;refseq 69;43;7;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0111 prophage linear Cluster_29 Bacilli_gi_501015627-38641-75521 hallmark;refseq 55;50;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0119 prophage linear Cluster_17 Bacilli_gi_501015680-377754-422572 hallmark;refseq 69;43;7;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0119 prophage linear Cluster_29 Bacilli_gi_501021365-40984-77864 hallmark;refseq 55;50;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0094 prophage linear Cluster_17 Bacilli_gi_501021925-379732-424550 hallmark;refseq 69;43;7;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0094 prophage linear Cluster_29 Bacilli_gi_501023403-39269-76149 hallmark;refseq 54;49;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0095 prophage linear Cluster_17 Bacilli_gi_501024419-380277-425095 hallmark;refseq 69;43;7;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0095 prophage linear Cluster_29 Bacilli_gi_501025499-38615-75495 hallmark;refseq 55;50;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0096 prophage linear Cluster_17 Bacilli_gi_501026048-378114-422932 hallmark;refseq 69;43;7;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0096 prophage linear Cluster_29 Bacilli_gi_501027727-39313-76193 hallmark;refseq 55;50;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0097 prophage linear Cluster_17 Bacilli_gi_501028254-937839-982657 hallmark;refseq 69;43;7;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0097 prophage linear Cluster_29 Bacilli_gi_501031130-38908-75788 hallmark;refseq 55;50;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0112 prophage linear Cluster_17 Bacilli_gi_501031759-941701-986519 hallmark;refseq 69;43;7;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0112 prophage linear Cluster_29 Bacilli_gi_501033790 hallmark;refseq 35;22;2;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Twortlikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus epidermidis 41tr extrachromosomal linear Cluster_211 Bacilli_gi_501035646 hallmark;refseq 25;13;1;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus epidermidis 41tr extrachromosomal linear Cluster_257 Bacilli_gi_501037124-41070-77950 hallmark;refseq 55;50;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0098 prophage linear Cluster_17 Bacilli_gi_501037683-963830-1008648 hallmark;refseq 69;43;7;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0098 prophage linear Cluster_29 Bacilli_gi_501039535-304349-341229 hallmark;refseq 55;50;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0099 prophage linear Cluster_17 Bacilli_gi_501040435-375705-420523 hallmark;refseq 69;43;7;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0099 prophage linear Cluster_29 Bacilli_gi_501041245 refseq 19;14;;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Spbetalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus epidermidis 36-1 extrachromosomal linear Cluster_211 Bacilli_gi_501041435 hallmark;refseq 29;27;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus epidermidis 36-1 extrachromosomal linear Cluster_6 Bacilli_gi_501041821 hallmark;refseq 29;14;;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus epidermidis 36-1 extrachromosomal linear Cluster_257 Bacilli_gi_501043260 hallmark;refseq 12;11;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus epidermidis 36-1 extrachromosomal linear Cluster_8 Bacilli_gi_501044662 hallmark;refseq 15;11;;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus epidermidis 36-1 extrachromosomal linear Cluster_6 Bacilli_gi_501044670 refseq 11;7;;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Spbetalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus epidermidis 36-1 extrachromosomal linear Cluster_194 Bacilli_gi_501046114-41863-78743 hallmark;refseq 55;50;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0113 prophage linear Cluster_17 Bacilli_gi_501047155-375033-419851 hallmark;refseq 69;43;7;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0113 prophage linear Cluster_29 Bacilli_gi_501053180-40725-77605 hallmark;refseq 55;50;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0114 prophage linear Cluster_17 Bacilli_gi_501053543-377891-422709 hallmark;refseq 69;43;7;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0114 prophage linear Cluster_29 Bacilli_gi_501056826-41116-77996 hallmark;refseq 55;50;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0100 prophage linear Cluster_17 Bacilli_gi_501057849-375008-419826 hallmark;refseq 69;43;7;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0100 prophage linear Cluster_29 Bacilli_gi_501059894 refseq 28;17;1;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Spbetalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus epidermidis 528m extrachromosomal linear Cluster_211 Bacilli_gi_501060258-34761-71641 hallmark;refseq 55;50;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0107 prophage linear Cluster_17 Bacilli_gi_501061065-375291-420109 hallmark;refseq 69;43;7;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0107 prophage linear Cluster_29 Bacilli_gi_501061350 hallmark;refseq 22;12;;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus epidermidis 528m extrachromosomal linear Cluster_257 Bacilli_gi_501061853 refseq 20;9;1;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Spbetalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus epidermidis 528m extrachromosomal linear Cluster_471 Bacilli_gi_501065799-34133-71013 hallmark;refseq 55;50;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0087 prophage linear Cluster_17 Bacilli_gi_501066317-944762-989580 hallmark;refseq 69;43;7;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0087 prophage linear Cluster_29 Bacilli_gi_501070097-39044-75924 hallmark;refseq 55;50;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0108 prophage linear Cluster_17 Bacilli_gi_501071196-379460-424278 hallmark;refseq 69;43;7;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0108 prophage linear Cluster_29 Bacilli_gi_501075363-2048191-2089324 hallmark;refseq 59;49;1;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0086 prophage linear Cluster_41 Bacilli_gi_501076900-1001297-1037319 hallmark;refseq 51;45;1;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0115 prophage linear Cluster_41 Bacilli_gi_501109801-24125-55467 hallmark;refseq 44;30;4;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecium EnGen0134 prophage linear Cluster_400 Bacilli_gi_501126329-95650-109683 hallmark;refseq 26;19;2;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecium EnGen0136 prophage linear Cluster_41 Bacilli_gi_501128942-24125-54786 hallmark;refseq 41;29;4;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecium EnGen0138 prophage linear Cluster_400 Bacilli_gi_501141450-964232-994911 hallmark;refseq 41;29;4;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecium EnGen0146 prophage linear Cluster_400 Bacilli_gi_501163551 hallmark;refseq 42;22;9;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecium EnGen0153 extrachromosomal linear Cluster_90 Bacilli_gi_501481354-33522-76500 hallmark;refseq 66;52;1;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0060 prophage linear Cluster_41 Bacilli_gi_501528963 hallmark 40;17;3;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus mundtii ATCC 882 extrachromosomal linear Cluster_30 Bacilli_gi_501531750-202064-244416 hallmark;refseq;vdb 66;31;4;31 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus hirae ATCC 9790 prophage linear Cluster_6 Bacilli_gi_501537837-868404-915959 hallmark;refseq;vdb 63;26;10;27 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus raffinosus ATCC 49464 prophage linear Cluster_17 Bacilli_gi_501558684-1019042-1036336 hallmark;refseq 19;15;1;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus phoeniculicola ATCC BAA-412 prophage linear Cluster_336 Bacilli_gi_501569203 hallmark;refseq 40;29;1;10 Viruses;unclassified;unclassified;unclassified;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0239 extrachromosomal linear Cluster_107 Bacilli_gi_501571940-675432-714482 hallmark;refseq 62;43;6;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0240 prophage linear Cluster_178 Bacilli_gi_501573066-43418-80299 hallmark;refseq 55;50;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0242 prophage linear Cluster_17 Bacilli_gi_501577308-39437-76318 hallmark;refseq 55;50;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0244 prophage linear Cluster_17 Bacilli_gi_501577667-402704-448469 hallmark;refseq 70;43;7;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0244 prophage linear Cluster_29 Bacilli_gi_501579664-38973-77954 hallmark;refseq 54;50;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0245 prophage linear Cluster_17 Bacilli_gi_501581526-40892-78102 hallmark;refseq 53;50;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0246 prophage linear Cluster_17 Bacilli_gi_501588936-378276-423907 hallmark;refseq 71;44;7;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0248 prophage linear Cluster_29 Bacilli_gi_501593784 refseq 17;7;3;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0251 extrachromosomal linear Cluster_50 Bacilli_gi_501601470-378194-423012 hallmark;refseq 69;43;7;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0231 prophage linear Cluster_29 Bacilli_gi_501606787-35087-71967 hallmark;refseq 54;49;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0231 prophage linear Cluster_17 Bacilli_gi_501611608-959869-997959 hallmark;refseq 56;47;2;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0250 prophage linear Cluster_41 Bacilli_gi_501614103 hallmark;refseq 61;34;5;22 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecium EnGen0267 extrachromosomal circular Cluster_119 Bacilli_gi_501666059-677285-710184 hallmark;refseq 48;33;3;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Phic3unalikevirus;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0308 prophage linear Cluster_32 Bacilli_gi_501839905-910461-957005 hallmark;refseq 73;46;7;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0297 prophage linear Cluster_29 Bacilli_gi_501852123-1159732-1204550 hallmark;refseq 69;43;7;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0310 prophage linear Cluster_29 Bacilli_gi_501852123-40247-77127 hallmark;refseq 55;50;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0310 prophage linear Cluster_17 Bacilli_gi_501862930-1467592-1513223 hallmark;refseq 71;44;7;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0294 prophage linear Cluster_29 Bacilli_gi_501870949-43103-80319 hallmark;refseq 53;50;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0307 prophage linear Cluster_17 Bacilli_gi_501899574-332744-369953 hallmark;refseq 54;51;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0298 prophage linear Cluster_17 Bacilli_gi_501926272-39348-76558 hallmark;refseq 53;50;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0302 prophage linear Cluster_17 Bacilli_gi_501935344-45010-82220 hallmark;refseq 53;50;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0306 prophage linear Cluster_17 Bacilli_gi_501941596-1706486-1746319 hallmark;refseq 64;50;5;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0291 prophage linear Cluster_41 Bacilli_gi_501960592-16978-50598 hallmark;refseq 55;32;3;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0279 prophage linear Cluster_119 Bacilli_gi_501968925-147482-181538 hallmark;refseq 51;34;7;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0281 prophage linear Cluster_178 Bacilli_gi_501975299 hallmark;refseq 46;37;1;8 Viruses;unclassified phages;unknown;unknown;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0287 extrachromosomal linear Cluster_107 Bacilli_gi_501981456-659288-697870 hallmark;refseq;vdb 62;46;6;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0300 prophage linear Cluster_31 Bacilli_gi_502075552-0-27138 hallmark;refseq 41;32;4;5 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0285 prophage linear Cluster_145 Bacilli_gi_502168195-1834634-1875220 hallmark;refseq 55;40;4;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0341 prophage linear Cluster_17 Bacilli_gi_502174871-1518129-1558706 hallmark;refseq 54;40;4;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0366 prophage linear Cluster_17 Bacilli_gi_502174949 hallmark;refseq 48;38;1;9 Viruses;unclassified phages;unknown;unknown;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0366 extrachromosomal linear Cluster_107 Bacilli_gi_502190608 hallmark;refseq 44;39;;5 Viruses;unclassified phages;unknown;unknown;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0361 extrachromosomal linear Cluster_107 Bacilli_gi_502198097 hallmark;refseq 49;38;1;10 Viruses;unclassified phages;unknown;unknown;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0345 extrachromosomal linear Cluster_107 Bacilli_gi_502206344-994950-1037475 hallmark;refseq 63;62;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis ATCC 19433 prophage linear Cluster_41 Bacilli_gi_502219466-45993-83402 hallmark;refseq 53;50;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0348 prophage linear Cluster_17 Bacilli_gi_502238181-1032628-1070718 hallmark;refseq 56;47;2;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis ATCC 35038 prophage linear Cluster_41 Bacilli_gi_502290128-1030126-1072642 hallmark;refseq 63;62;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0354 prophage linear Cluster_41 Bacilli_gi_502290128-372940-420205 hallmark;refseq 71;45;7;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0354 prophage linear Cluster_29 Bacilli_gi_502292638-5046-18721 refseq 30;20;4;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0355 prophage linear Cluster_178 Bacilli_gi_502299557-1641431-1685718 hallmark;refseq 64;62;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0369 prophage linear Cluster_41 Bacilli_gi_502303887-108605-145100 hallmark;refseq 53;43;5;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0357 prophage linear Cluster_178 Bacilli_gi_502314859-41796-79012 hallmark;refseq 53;50;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0370 prophage linear Cluster_17 Bacilli_gi_502322615-33902-71931 hallmark;refseq 57;53;1;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0359 prophage linear Cluster_17 Bacilli_gi_502326762-45-24240 hallmark;refseq 31;18;4;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0360 prophage linear Cluster_222 Bacilli_gi_502327608-33351-74643 hallmark;refseq 60;49;1;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0360 prophage linear Cluster_41 Bacilli_gi_502354864-246239-283567 hallmark;refseq;vdb 60;37;2;21 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0367 prophage linear Cluster_40 Bacilli_gi_502354864-392672-430112 hallmark;refseq 67;48;4;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0367 prophage linear Cluster_17 Bacilli_gi_502362932-34964-77961 hallmark;refseq 60;50;;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis ATCC 6055 prophage linear Cluster_41 Bacilli_gi_502395783-40359-77654 hallmark;refseq 54;51;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0339 prophage linear Cluster_17 Bacilli_gi_502402921 hallmark;refseq 44;42;1;1 Viruses;unclassified phages;unknown;unknown;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0331 extrachromosomal linear Cluster_107 Bacilli_gi_502424906-1033617-1076164 hallmark;refseq 64;63;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0333 prophage linear Cluster_41 Bacilli_gi_502427206-1029360-1072336 hallmark;refseq 62;60;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0328 prophage linear Cluster_41 Bacilli_gi_502427206-628487-667434 hallmark;refseq 55;41;3;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0328 prophage linear Cluster_178 Bacilli_gi_502432782-1367392-1407978 hallmark;refseq 54;40;4;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0332 prophage linear Cluster_17 Bacilli_gi_502432864 hallmark;refseq 24;23;;1 Viruses;unclassified phages;unknown;unknown;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0332 extrachromosomal linear Cluster_107 Bacilli_gi_505484066 hallmark 83;24;5;54 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus cereus TIAC219 extrachromosomal circular Cluster_365 Bacilli_gi_505484080 hallmark 82;27;12;43 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Punalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus cereus TIAC219 extrachromosomal circular Cluster_150 Bacilli_gi_505484126 hallmark 37;15;5;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus cereus TIAC219 extrachromosomal linear Cluster_423 Bacilli_gi_505484137 hallmark;vdb 13;7;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus cereus TIAC219 extrachromosomal linear Cluster_76 Bacilli_gi_505721318-375274-420092 hallmark;refseq 69;43;7;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0194 prophage linear Cluster_29 Bacilli_gi_505721331-39353-76233 hallmark;refseq 55;50;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0194 prophage linear Cluster_17 Bacilli_gi_505721346-2973980-3010860 hallmark;refseq 55;50;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0195 prophage linear Cluster_17 Bacilli_gi_505721346-948924-993742 hallmark;refseq 69;43;7;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0195 prophage linear Cluster_29 Bacilli_gi_505721363-643194-680074 hallmark;refseq 55;50;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0196 prophage linear Cluster_17 Bacilli_gi_505721432-948531-993349 hallmark;refseq 69;43;7;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0196 prophage linear Cluster_29 Bacilli_gi_505721461-38709-75589 hallmark;refseq 55;50;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0197 prophage linear Cluster_17 Bacilli_gi_505721462-377609-422427 hallmark;refseq 69;43;7;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0197 prophage linear Cluster_29 Bacilli_gi_505721713-35142-72022 hallmark;refseq 54;49;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0199 prophage linear Cluster_17 Bacilli_gi_505721714-380382-425200 hallmark;refseq 69;43;7;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0199 prophage linear Cluster_29 Bacilli_gi_505721731-41679-78559 hallmark;refseq 55;50;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0200 prophage linear Cluster_17 Bacilli_gi_505721735-375950-420768 hallmark;refseq 69;43;7;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0200 prophage linear Cluster_29 Bacilli_gi_505721755-378156-422974 hallmark;refseq 69;43;7;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0201 prophage linear Cluster_29 Bacilli_gi_505723210-41893-78773 hallmark;refseq 55;50;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0201 prophage linear Cluster_17 Bacilli_gi_505727129-375135-419953 hallmark;refseq 69;43;7;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0202 prophage linear Cluster_29 Bacilli_gi_505727149-40591-77471 hallmark;refseq 55;50;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0202 prophage linear Cluster_17 Bacilli_gi_505727155-378152-422970 hallmark;refseq 69;43;7;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0203 prophage linear Cluster_29 Bacilli_gi_505727175-33893-70773 hallmark;refseq 55;50;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0203 prophage linear Cluster_17 Bacilli_gi_505727207-38693-75573 hallmark;refseq 55;50;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0204 prophage linear Cluster_17 Bacilli_gi_505727228-376379-421197 hallmark;refseq 69;43;7;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0204 prophage linear Cluster_29 Bacilli_gi_505727244-45573-82453 hallmark;refseq 55;50;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0207 prophage linear Cluster_17 Bacilli_gi_505727655-948422-993240 hallmark;refseq 69;43;7;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0207 prophage linear Cluster_29 Bacilli_gi_505728762-375161-419979 hallmark;refseq 69;43;7;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0205 prophage linear Cluster_29 Bacilli_gi_505728820-40606-77486 hallmark;refseq 55;50;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0205 prophage linear Cluster_17 Bacilli_gi_505728835-35219-72099 hallmark;refseq 55;50;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0228 prophage linear Cluster_17 Bacilli_gi_505728853-378051-422869 hallmark;refseq 69;43;7;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0228 prophage linear Cluster_29 Bacilli_gi_505729108-38843-75723 hallmark;refseq 55;50;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0206 prophage linear Cluster_17 Bacilli_gi_505729133-943592-988410 hallmark;refseq 69;43;7;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0206 prophage linear Cluster_29 Bacilli_gi_505729151-375071-419889 hallmark;refseq 69;43;7;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0374 prophage linear Cluster_29 Bacilli_gi_505729176-34758-72657 hallmark;refseq 57;52;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0374 prophage linear Cluster_17 Bacilli_gi_505731482-34873-71753 hallmark;refseq 54;49;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0208 prophage linear Cluster_17 Bacilli_gi_505732217-379311-424129 hallmark;refseq 69;43;7;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0208 prophage linear Cluster_29 Bacilli_gi_505733671-377970-422788 hallmark;refseq 69;43;7;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0209 prophage linear Cluster_29 Bacilli_gi_505733696-38857-75737 hallmark;refseq 54;49;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0209 prophage linear Cluster_17 Bacilli_gi_505733734-375230-420048 hallmark;refseq 69;43;7;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0210 prophage linear Cluster_29 Bacilli_gi_505733761-40717-77597 hallmark;refseq 55;50;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0210 prophage linear Cluster_17 Bacilli_gi_505733769-39179-76059 hallmark;refseq 55;50;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0211 prophage linear Cluster_17 Bacilli_gi_505733770-374980-419798 hallmark;refseq 69;43;7;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0211 prophage linear Cluster_29 Bacilli_gi_505733771 hallmark;refseq 35;31;;4 Viruses;unclassified phages;unknown;unknown;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0211 extrachromosomal linear Cluster_107 Bacilli_gi_505733855-937440-982258 hallmark;refseq 69;43;7;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0213 prophage linear Cluster_29 Bacilli_gi_505733897-39218-76098 hallmark;refseq 54;49;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0213 prophage linear Cluster_17 Bacilli_gi_505734158-378071-422889 hallmark;refseq 69;43;7;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0214 prophage linear Cluster_29 Bacilli_gi_505737603-38901-75781 hallmark;refseq 55;50;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0214 prophage linear Cluster_17 Bacilli_gi_505739668-378254-423072 hallmark;refseq 69;43;7;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0215 prophage linear Cluster_29 Bacilli_gi_505739720-39695-76575 hallmark;refseq 54;49;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0215 prophage linear Cluster_17 Bacilli_gi_505741125-379825-424643 hallmark;refseq 69;43;7;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0216 prophage linear Cluster_29 Bacilli_gi_505741126 hallmark;refseq 35;31;;4 Viruses;unclassified phages;unknown;unknown;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0216 extrachromosomal linear Cluster_107 Bacilli_gi_505741153-35878-72758 hallmark;refseq 55;50;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0216 prophage linear Cluster_17 Bacilli_gi_505741330-932948-977766 hallmark;refseq 69;43;7;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0217 prophage linear Cluster_29 Bacilli_gi_505742298-40597-77477 hallmark;refseq 55;50;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0217 prophage linear Cluster_17 Bacilli_gi_505743493-935441-980259 hallmark;refseq 69;43;7;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0218 prophage linear Cluster_29 Bacilli_gi_505744447-33893-70773 hallmark;refseq 55;50;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0218 prophage linear Cluster_17 Bacilli_gi_505745964-35422-72302 hallmark;refseq 55;50;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0219 prophage linear Cluster_17 Bacilli_gi_505746810-377996-422814 hallmark;refseq 69;43;7;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0219 prophage linear Cluster_29 Bacilli_gi_505747177-652548-689428 hallmark;refseq 55;50;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0220 prophage linear Cluster_17 Bacilli_gi_505747692-908265-953083 hallmark;refseq 69;43;7;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0220 prophage linear Cluster_29 Bacilli_gi_505750378-40883-77763 hallmark;refseq 54;49;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0221 prophage linear Cluster_17 Bacilli_gi_505750666-375698-420516 hallmark;refseq 69;43;7;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0221 prophage linear Cluster_29 Bacilli_gi_505751087-39414-76294 hallmark;refseq 54;49;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0222 prophage linear Cluster_17 Bacilli_gi_505751930-942630-987448 hallmark;refseq 69;43;7;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0222 prophage linear Cluster_29 Bacilli_gi_505752071 hallmark;refseq 35;31;;4 Viruses;unclassified phages;unknown;unknown;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0222 extrachromosomal linear Cluster_107 Bacilli_gi_505755426-34648-71528 hallmark;refseq 55;50;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0223 prophage linear Cluster_17 Bacilli_gi_505757456-375070-419888 hallmark;refseq 69;43;7;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0223 prophage linear Cluster_29 Bacilli_gi_505767932-42300-79125 hallmark;refseq 56;51;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0224 prophage linear Cluster_17 Bacilli_gi_505782770-950402-995220 hallmark;refseq 69;43;7;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0224 prophage linear Cluster_29 Bacilli_gi_505795205-35502-72382 hallmark;refseq 55;50;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0225 prophage linear Cluster_17 Bacilli_gi_505804684-379194-424012 hallmark;refseq 69;43;7;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0225 prophage linear Cluster_29 Bacilli_gi_505804685 hallmark;refseq 26;23;;3 Viruses;unclassified phages;unknown;unknown;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0225 extrachromosomal linear Cluster_107 Bacilli_gi_505804699-40890-77770 hallmark;refseq 54;49;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis EnGen0226 prophage linear Cluster_17 Bacilli_gi_505804725 hallmark;refseq 20;14;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecium EnGen0184 extrachromosomal linear Cluster_6 Bacilli_gi_505812665-525579-562476 hallmark;refseq 54;36;5;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Phic3unalikevirus;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecium EnGen0167 prophage linear Cluster_119 Bacilli_gi_505852353-75-21287 hallmark;refseq 32;17;7;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecium EnGen0175 prophage linear Cluster_119 Bacilli_gi_505865337-25600-59139 hallmark;refseq;vdb 53;25;9;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecium EnGen0177 prophage linear Cluster_250 Bacilli_gi_505870677 hallmark;refseq 38;23;7;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecium EnGen0177 extrachromosomal linear Cluster_32 Bacilli_gi_507018265 hallmark;refseq 56;37;6;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus cereus BMG1.7 extrachromosomal linear Cluster_234 Bacilli_gi_507018283 hallmark;refseq 33;29;;4 Viruses;dsDNA viruses no RNA stage;unknown;Tectiviridae;Tectivirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus cereus BMG1.7 extrachromosomal linear Cluster_125 Bacilli_gi_507025306-845403-896624 hallmark;refseq 67;61;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus cereus HuB13-1 prophage linear Cluster_55 Bacilli_gi_507025386 hallmark;refseq 72;49;6;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus cereus HuB13-1 extrachromosomal linear Cluster_234 Bacilli_gi_507025497 hallmark;refseq 24;24;; Viruses;dsDNA viruses no RNA stage;unknown;Tectiviridae;Tectivirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus cereus HuB13-1 extrachromosomal linear Cluster_125 Bacilli_gi_507027221-2388773-2433538 hallmark;refseq 65;56;2;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus cereus HuB4-4 prophage linear Cluster_55 Bacilli_gi_507027448-46096-89013 hallmark 48;11;9;28 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus cereus HuB4-4 prophage linear Cluster_150 Bacilli_gi_507027716 hallmark;refseq 55;35;4;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus cereus HuB4-4 extrachromosomal linear Cluster_55 Bacilli_gi_507027929 hallmark;refseq 80;65;4;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus cereus IS845/00 extrachromosomal linear Cluster_116 Bacilli_gi_507027989 hallmark;refseq 71;48;6;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus cereus ISP2954 extrachromosomal linear Cluster_234 Bacilli_gi_507028065-43024-56217 refseq;vdb 18;15;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus cereus ISP2954 prophage linear Cluster_19 Bacilli_gi_507028092 hallmark;refseq 24;22;;2 Viruses;dsDNA viruses no RNA stage;unknown;Tectiviridae;Tectivirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus cereus ISP2954 extrachromosomal linear Cluster_125 Bacilli_gi_507028098 hallmark;refseq 25;25;; Viruses;dsDNA viruses no RNA stage;unknown;Tectiviridae;Tectivirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus cereus ISP2954 extrachromosomal linear Cluster_125 Bacilli_gi_507028124-1766-63644 hallmark;refseq;vdb 83;46;19;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus cereus ISP2954 prophage linear Cluster_55 Bacilli_gi_507028129 hallmark;refseq;vdb 14;6;5;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus cereus ISP2954 extrachromosomal linear Cluster_76 Bacilli_gi_507028670 hallmark;refseq 43;24;6;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus cereus MC118 extrachromosomal linear Cluster_135 Bacilli_gi_507029665 hallmark 64;21;13;30 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus cereus VD021 extrachromosomal circular Cluster_423 Bacilli_gi_507031328-401468-440635 hallmark;refseq 43;28;1;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus cereus VD021 prophage linear Cluster_55 Bacilli_gi_507039007 hallmark;refseq 57;27;6;24 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus cereus VD133 extrachromosomal linear Cluster_290 Bacilli_gi_507040157-159148-201524 hallmark;refseq 44;32;4;8 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus cereus VD133 prophage linear Cluster_269 Bacilli_gi_507048098 hallmark;refseq 73;43;7;23 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus cereus VD146 extrachromosomal circular Cluster_116 Bacilli_gi_507053045 hallmark;refseq 52;27;8;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus cereus VD184 extrachromosomal linear Cluster_241 Bacilli_gi_507053064 hallmark 21;8;3;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus cereus VD184 extrachromosomal linear Cluster_241 Bacilli_gi_507053096 hallmark;refseq 27;24;;3 Viruses;dsDNA viruses no RNA stage;unknown;Tectiviridae;Tectivirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus cereus VD184 extrachromosomal linear Cluster_125 Bacilli_gi_507053172 hallmark;refseq 77;38;1;38 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus cereus VD184 extrachromosomal circular Cluster_192 Bacilli_gi_507054256-840364-876941 hallmark;refseq 56;51;;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus cereus VD196 prophage linear Cluster_290 Bacilli_gi_507054341 hallmark;refseq 22;17;2;3 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus cereus VD196 extrachromosomal linear Cluster_145 Bacilli_gi_507054687-861351-883054 hallmark;refseq 37;22;6;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus cereus VD196 prophage linear Cluster_150 Bacilli_gi_507055493-2793767-2856861 hallmark;refseq 80;40;15;25 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus cereus VD214 prophage linear Cluster_76 Bacilli_gi_507057479 hallmark;refseq 99;37;27;35 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus cereus VDM053 extrachromosomal linear Cluster_268 Bacilli_gi_507065719 hallmark;refseq 86;38;14;34 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus cereus B5-2 extrachromosomal circular Cluster_116 Bacilli_gi_507417516 refseq 32;27;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus 103564 extrachromosomal linear Cluster_6 Bacilli_gi_507417543 hallmark;refseq 27;27;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus 103564 extrachromosomal linear Cluster_56 Bacilli_gi_507417659 refseq 26;22;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus 103564 extrachromosomal linear Cluster_8 Bacilli_gi_507417756 hallmark;refseq 32;31;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus 103564 extrachromosomal linear Cluster_6 Bacilli_gi_508126650-849452-890319 hallmark;refseq 69;45;3;21 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus iniae SF1 prophage linear Cluster_197 Bacilli_gi_50913346-1202303-1232274 hallmark;refseq 47;44;2;1 Viruses;unclassified;unclassified;unclassified;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes MGAS10394 prophage linear Cluster_57 Bacilli_gi_50913346-1331436-1355819 hallmark;refseq 29;27;;2 Viruses;unclassified;unclassified;unclassified;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes MGAS10394 prophage linear Cluster_106 Bacilli_gi_50913346-1546623-1564006 hallmark;refseq 18;16;1;1 Viruses;unclassified phages;;;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes MGAS10394 prophage linear Cluster_115 Bacilli_gi_50913346-35574-75249 hallmark;refseq 51;49;;2 Viruses;unclassified;unclassified;unclassified;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes MGAS10394 prophage linear Cluster_70 Bacilli_gi_510795580 refseq 25;22;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus 091751 extrachromosomal linear Cluster_223 Bacilli_gi_510795913 hallmark;refseq 24;24;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus 091751 extrachromosomal linear Cluster_40 Bacilli_gi_510796250-191153-228034 hallmark;refseq 55;50;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis V583 prophage linear Cluster_17 Bacilli_gi_510799013-2602180-2640899 hallmark;refseq;vdb 59;38;2;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus dispar ATCC 51266 prophage linear Cluster_472 Bacilli_gi_510799013-332654-374213 hallmark;refseq 60;34;;26 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;C2likevirus;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus dispar ATCC 51266 prophage linear Cluster_492 Bacilli_gi_510804365-420471-460981 hallmark;refseq;vdb 54;33;6;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus avium ATCC 14025 prophage linear Cluster_157 Bacilli_gi_510812190-57883-106086 hallmark;refseq 64;62;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus 122051 prophage linear Cluster_6 Bacilli_gi_510813493 hallmark;refseq 36;35;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus 112808A extrachromosomal linear Cluster_49 Bacilli_gi_510813710-2326-50153 hallmark;refseq 71;68;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus 112808A prophage linear Cluster_6 Bacilli_gi_510813841 refseq 49;15;2;32 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus MRGR3 extrachromosomal linear Cluster_194 Bacilli_gi_510813919 hallmark;refseq 43;40;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus MRGR3 extrachromosomal linear Cluster_56 Bacilli_gi_510814076 hallmark;refseq 18;18;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus MRGR3 extrachromosomal linear Cluster_40 Bacilli_gi_510929231 hallmark;refseq;vdb 34;19;8;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecium ATCC 8459 extrachromosomal linear Cluster_90 Bacilli_gi_510929609-513442-560997 hallmark;refseq;vdb 63;26;10;27 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus raffinosus ATCC 49464 prophage linear Cluster_17 Bacilli_gi_510932048-1372592-1411116 hallmark;refseq;vdb 58;38;2;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus dispar ATCC 51266 prophage linear Cluster_472 Bacilli_gi_510932048-827932-869296 hallmark;refseq;vdb 60;34;;26 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;C2likevirus;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus dispar ATCC 51266 prophage linear Cluster_492 Bacilli_gi_510932088-850646-891156 hallmark;refseq;vdb 54;33;6;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus avium ATCC 14025 prophage linear Cluster_157 Bacilli_gi_510932270-734192-771073 hallmark;refseq 55;50;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis V583 prophage linear Cluster_17 Bacilli_gi_510998441 refseq 28;24;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus CBD-635 extrachromosomal linear Cluster_8 Bacilli_gi_510998485 hallmark;refseq 16;16;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus CBD-635 extrachromosomal linear Cluster_35 Bacilli_gi_511644305-4233-44878 hallmark;refseq 61;56;;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus paracasei subsp. paracasei Lpp219 prophage linear Cluster_127 Bacilli_gi_511644467 hallmark;refseq 46;39;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus paracasei subsp. paracasei Lpp219 extrachromosomal linear Cluster_32 Bacilli_gi_511644714 hallmark 15;4;3;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus paracasei subsp. paracasei Lpp219 extrachromosomal linear Cluster_138 Bacilli_gi_511645692 hallmark;refseq 32;23;;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus paracasei subsp. paracasei Lpp229 extrachromosomal linear Cluster_161 Bacilli_gi_511646053 hallmark;refseq 53;42;2;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus paracasei subsp. paracasei Lpp229 extrachromosomal linear Cluster_127 Bacilli_gi_511646167 hallmark;refseq 39;15;13;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus paracasei subsp. paracasei Lpp229 extrachromosomal linear Cluster_32 Bacilli_gi_511646970 hallmark 22;6;6;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus paracasei subsp. paracasei Lpp74 extrachromosomal linear Cluster_138 Bacilli_gi_511647718 hallmark;refseq 8;8;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus paracasei subsp. paracasei Lpp7 extrachromosomal linear Cluster_127 Bacilli_gi_511647753 hallmark;refseq 11;7;1;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus paracasei subsp. paracasei Lpp7 extrachromosomal linear Cluster_138 Bacilli_gi_511662364-0-15743 hallmark 17;8;5;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus paracasei subsp. paracasei CNCM I-4270 prophage linear Cluster_30 Bacilli_gi_511662431 refseq 30;14;4;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus paracasei subsp. paracasei CNCM I-4270 extrachromosomal linear Cluster_96 Bacilli_gi_511664302 refseq 22;11;5;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus paracasei subsp. paracasei Lpp14 extrachromosomal linear Cluster_96 Bacilli_gi_511664517 refseq 34;26;2;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus paracasei subsp. paracasei Lpp14 extrachromosomal linear Cluster_133 Bacilli_gi_511666737 refseq 26;23;;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus paracasei subsp. tolerans Lpl14 extrachromosomal linear Cluster_133 Bacilli_gi_511666764 hallmark;refseq 12;11;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus paracasei subsp. tolerans Lpl14 extrachromosomal linear Cluster_127 Bacilli_gi_511666795 refseq 23;17;;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus paracasei subsp. tolerans Lpl14 extrachromosomal linear Cluster_96 Bacilli_gi_511666806 hallmark;refseq 15;13;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus paracasei subsp. tolerans Lpl14 extrachromosomal linear Cluster_96 Bacilli_gi_511699586 hallmark;refseq 37;14;8;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus paracasei subsp. paracasei Lpp221 extrachromosomal linear Cluster_138 Bacilli_gi_511715541 hallmark;refseq 33;27;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus paracasei subsp. paracasei Lpp37 extrachromosomal linear Cluster_41 Bacilli_gi_511716556 refseq 32;15;2;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus paracasei subsp. paracasei Lpp37 extrachromosomal linear Cluster_96 Bacilli_gi_511739624 refseq 16;8;2;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus paracasei subsp. paracasei CNCM I-4649 extrachromosomal linear Cluster_420 Bacilli_gi_511746432 hallmark;refseq 48;39;2;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus paracasei subsp. paracasei Lpp43 extrachromosomal linear Cluster_96 Bacilli_gi_511746486 hallmark;refseq 31;24;;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus paracasei subsp. paracasei Lpp43 extrachromosomal linear Cluster_161 Bacilli_gi_511746615 hallmark;refseq 17;12;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus paracasei subsp. paracasei Lpp43 extrachromosomal linear Cluster_138 Bacilli_gi_511746626 hallmark;refseq 19;9;2;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus paracasei subsp. paracasei Lpp43 extrachromosomal linear Cluster_138 Bacilli_gi_511748055 hallmark;refseq 32;28;;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus paracasei subsp. tolerans Lpl7 extrachromosomal linear Cluster_127 Bacilli_gi_511748065 refseq 25;22;;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus paracasei subsp. tolerans Lpl7 extrachromosomal linear Cluster_133 Bacilli_gi_511748074 refseq 23;17;;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus paracasei subsp. tolerans Lpl7 extrachromosomal linear Cluster_96 Bacilli_gi_511749509 hallmark;refseq 56;31;4;21 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus paracasei subsp. paracasei Lpp230 extrachromosomal linear Cluster_96 Bacilli_gi_511750666 hallmark;refseq 57;46;1;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;C2likevirus;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus paracasei subsp. paracasei Lpp17 extrachromosomal linear Cluster_133 Bacilli_gi_511750775-22690-39175 refseq 32;19;2;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus paracasei subsp. paracasei Lpp17 prophage linear Cluster_96 Bacilli_gi_511750877 hallmark;refseq 19;17;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus paracasei subsp. paracasei Lpp17 extrachromosomal linear Cluster_143 Bacilli_gi_511751224 hallmark;refseq 19;17;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus paracasei subsp. paracasei Lpp22 extrachromosomal linear Cluster_127 Bacilli_gi_511751261 hallmark;refseq 20;18;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus paracasei subsp. paracasei Lpp22 extrachromosomal linear Cluster_41 Bacilli_gi_511751413 refseq 44;19;8;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus paracasei subsp. paracasei Lpp22 extrachromosomal linear Cluster_96 Bacilli_gi_511751733 hallmark;refseq 18;15;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus paracasei subsp. paracasei Lpp22 extrachromosomal linear Cluster_52 Bacilli_gi_511755028 hallmark;refseq 47;35;1;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus paracasei subsp. paracasei Lpp225 extrachromosomal linear Cluster_96 Bacilli_gi_512543719-619918-675626 hallmark;refseq 97;64;9;24 Viruses;unclassified phages;;;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae ILRI005 prophage linear Cluster_19 Bacilli_gi_512594165 hallmark;refseq 54;28;6;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus reuteri I5007 extrachromosomal linear Cluster_32 Bacilli_gi_513042830 hallmark;refseq;vdb 28;11;7;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;unknown;Exiguobacterium Exiguobacterium sp. S17 extrachromosomal linear Cluster_129 Bacilli_gi_513043252 hallmark 24;9;1;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;unknown;Exiguobacterium Exiguobacterium sp. S17 extrachromosomal linear Cluster_269 Bacilli_gi_513803224 hallmark;refseq 61;33;9;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus plantarum IPLA88 extrachromosomal linear Cluster_52 Bacilli_gi_513804293 hallmark;refseq 57;29;3;25 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus plantarum IPLA88 extrachromosomal circular Cluster_491 Bacilli_gi_513804419 hallmark;vdb 24;10;5;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus plantarum IPLA88 extrachromosomal linear Cluster_138 Bacilli_gi_514064966-1532449-1578918 hallmark;refseq 67;62;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus CA-347 prophage linear Cluster_6 Bacilli_gi_514340857 hallmark;refseq 80;66;4;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus cereus IS075 extrachromosomal circular Cluster_116 Bacilli_gi_514961984 hallmark;refseq 99;44;21;34 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus cereus BAG1O-3 extrachromosomal circular Cluster_186 Bacilli_gi_518697859-0-15863 hallmark;vdb 24;12;2;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus paracasei subsp. paracasei Lpp227 prophage linear Cluster_138 Bacilli_gi_518717293 hallmark;refseq;vdb 31;13;5;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus paracasei subsp. paracasei CNCM I-4648 extrachromosomal linear Cluster_138 Bacilli_gi_518724447 hallmark;refseq 16;11;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus paracasei subsp. paracasei CNCM I-4648 extrachromosomal linear Cluster_161 Bacilli_gi_518727579 hallmark;refseq 19;15;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus paracasei subsp. paracasei Lpp125 extrachromosomal linear Cluster_52 Bacilli_gi_518727744 refseq 33;16;3;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus paracasei subsp. paracasei Lpp125 extrachromosomal linear Cluster_96 Bacilli_gi_518727829 hallmark;refseq 22;19;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus paracasei subsp. paracasei Lpp125 extrachromosomal linear Cluster_41 Bacilli_gi_518732506 hallmark;refseq 50;25;5;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus paracasei subsp. paracasei CNCM I-2877 extrachromosomal linear Cluster_96 Bacilli_gi_518737665 hallmark;refseq 58;47;1;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus paracasei subsp. paracasei Lpp70 extrachromosomal linear Cluster_32 Bacilli_gi_519663067-11023-48772 hallmark;refseq 62;60;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unknown;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Geobacillus Geobacillus kaustophilus GBlys prophage linear Cluster_15 Bacilli_gi_519666216 hallmark;refseq 54;28;3;23 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Phic3unalikevirus;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus otakiensis JCM 15040 extrachromosomal linear Cluster_32 Bacilli_gi_520977850 refseq 17;10;3;4 Viruses;dsDNA viruses no RNA stage;unknown;unknown;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus epidermidis Scl22 extrachromosomal linear Cluster_331 Bacilli_gi_520981127 refseq 19;11;3;5 Viruses;dsDNA viruses no RNA stage;unclassified;unclassified;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus epidermidis Sentile2 extrachromosomal linear Cluster_331 Bacilli_gi_521210823-1165352-1214040 hallmark;refseq 72;69;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus Bmb9393 prophage linear Cluster_6 Bacilli_gi_521210823-1641561-1682083 hallmark;refseq 60;57;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus Bmb9393 prophage linear Cluster_8 Bacilli_gi_522835068 hallmark;refseq 36;24;;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecium 13.SD.W.09 extrachromosomal linear Cluster_41 Bacilli_gi_522835105 refseq 27;13;2;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecium 13.SD.W.09 extrachromosomal linear Cluster_119 Bacilli_gi_522835413 refseq 29;21;;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis 02-MB-BW-10 extrachromosomal linear Cluster_17 Bacilli_gi_522835488-106286-142974 hallmark;refseq 56;44;6;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis B83616-1 prophage linear Cluster_178 Bacilli_gi_522835544 hallmark;refseq 36;27;5;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis 06-MB-S-10 extrachromosomal linear Cluster_29 Bacilli_gi_522835552 refseq 61;34;12;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis 06-MB-S-10 extrachromosomal linear Cluster_332 Bacilli_gi_522835565 hallmark;refseq 33;17;3;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis 06-MB-S-10 extrachromosomal linear Cluster_17 Bacilli_gi_522835665 hallmark;refseq 36;27;5;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis 06-MB-S-04 extrachromosomal linear Cluster_29 Bacilli_gi_522835787 hallmark;refseq 19;18;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis 06-MB-DW-09 extrachromosomal linear Cluster_41 Bacilli_gi_522835811 hallmark 16;8;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis 06-MB-DW-09 extrachromosomal linear Cluster_90 Bacilli_gi_522835911 refseq 24;20;;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis F01966 extrachromosomal linear Cluster_17 Bacilli_gi_522835944 refseq 32;15;4;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis F01966 extrachromosomal linear Cluster_250 Bacilli_gi_522835961 hallmark;refseq 37;26;1;10 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis F01966 extrachromosomal linear Cluster_145 Bacilli_gi_522835964 hallmark;refseq 20;17;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis F01966 extrachromosomal linear Cluster_31 Bacilli_gi_522836001 hallmark;refseq 22;15;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis 13-SD-W-01 extrachromosomal linear Cluster_88 Bacilli_gi_522836334 hallmark;refseq 16;15;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecium SD2A-2 extrachromosomal linear Cluster_41 Bacilli_gi_522836561 hallmark;refseq 43;32;3;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecium SB2C-2 extrachromosomal linear Cluster_141 Bacilli_gi_522836732 hallmark;refseq 35;23;4;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecium OC2A-1 extrachromosomal linear Cluster_41 Bacilli_gi_522836810 hallmark;refseq 15;12;1;2 Viruses;unclassified phages;unknown;unknown;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecium LA4B-2 extrachromosomal linear Cluster_107 Bacilli_gi_522836828 hallmark;refseq 23;15;4;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecium LA4B-2 extrachromosomal linear Cluster_52 Bacilli_gi_522836830 hallmark;refseq 27;22;;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecium LA4B-2 extrachromosomal linear Cluster_30 Bacilli_gi_522836897 hallmark;refseq 37;26;3;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis WKS-26-18-2 extrachromosomal linear Cluster_141 Bacilli_gi_522837034 hallmark;refseq 37;26;7;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis UP2S-6 extrachromosomal linear Cluster_29 Bacilli_gi_522837055 hallmark;refseq 34;17;4;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis UP2S-6 extrachromosomal linear Cluster_222 Bacilli_gi_522837160 hallmark;refseq 18;10;2;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis LA3B-2 extrachromosomal linear Cluster_222 Bacilli_gi_522837163 hallmark;refseq 44;30;7;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis LA3B-2 extrachromosomal linear Cluster_145 Bacilli_gi_522837217 hallmark;refseq 16;16;; Viruses;unclassified phages;unknown;unknown;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis LA3B-2 extrachromosomal linear Cluster_107 Bacilli_gi_522837238 hallmark;refseq 27;20;1;6 Viruses;unclassified phages;unknown;unknown;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis LA3B-2 extrachromosomal linear Cluster_107 Bacilli_gi_523414886-1002676-1040469 hallmark;refseq 60;50;4;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes M1 476 prophage linear Cluster_196 Bacilli_gi_523414886-1404512-1444760 hallmark;refseq 51;46;;5 Viruses;unclassified;unclassified;unclassified;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes M1 476 prophage linear Cluster_70 Bacilli_gi_523688505-5844-52726 hallmark;refseq 70;45;3;22 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus gasseri K7 prophage linear Cluster_32 Bacilli_gi_523688622 hallmark;refseq 62;54;;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus gasseri K7 extrachromosomal linear Cluster_141 Bacilli_gi_523688976-105158-146099 hallmark;refseq 70;68;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus SA_ST125_MupR prophage linear Cluster_56 Bacilli_gi_525808973-964189-1010999 hallmark;refseq 70;58;3;9 Viruses;unclassified phages;;;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes HSC5 prophage linear Cluster_115 Bacilli_gi_525896797-788234-825281 hallmark;refseq 66;48;8;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Listeriaceae;Listeria Listeria monocytogenes prophage linear Cluster_94 Bacilli_gi_525916939-1072721-1113121 hallmark;refseq;vdb 66;48;8;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Listeriaceae;Listeria Listeria monocytogenes prophage linear Cluster_94 Bacilli_gi_525916939-2207951-2250949 hallmark;refseq 61;48;2;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Listeriaceae;Listeria Listeria monocytogenes prophage linear Cluster_162 Bacilli_gi_525924641-0-20184 hallmark;refseq 36;27;3;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Listeriaceae;Listeria Listeria monocytogenes prophage linear Cluster_94 Bacilli_gi_525924641-286350-322424 hallmark;refseq;vdb 55;41;4;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Listeriaceae;Listeria Listeria monocytogenes prophage linear Cluster_94 Bacilli_gi_525929673-2120850-2157912 hallmark;refseq 66;48;8;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Listeriaceae;Listeria Listeria monocytogenes prophage linear Cluster_94 Bacilli_gi_525934212-2389375-2426437 hallmark;refseq 66;47;9;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Listeriaceae;Listeria Listeria monocytogenes prophage linear Cluster_94 Bacilli_gi_526444490 hallmark;refseq 100;37;18;45 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus subtilis subsp. subtilis str. NCIB 3610 extrachromosomal linear Cluster_333 Bacilli_gi_527329219-1342033-1382274 hallmark;refseq 58;44;2;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus lutetiensis 033 prophage linear Cluster_52 Bacilli_gi_532358222-1459948-1506272 hallmark;refseq 67;66;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus 55/2053 prophage linear Cluster_56 Bacilli_gi_544020570 hallmark;refseq 79;61;2;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus thuringiensis T01-328 extrachromosomal linear Cluster_308 Bacilli_gi_544020631 hallmark;refseq 30;18;8;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus thuringiensis T01-328 extrachromosomal linear Cluster_76 Bacilli_gi_544020692 hallmark;refseq 17;13;;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus thuringiensis T01-328 extrachromosomal linear Cluster_40 Bacilli_gi_544641250-21-38283 hallmark;refseq 51;35;3;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae MRI Z1-038 prophage linear Cluster_68 Bacilli_gi_544676481 refseq 30;14;7;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecium CRL1879 extrachromosomal linear Cluster_119 Bacilli_gi_544676657 hallmark;refseq 21;16;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecium CRL1879 extrachromosomal linear Cluster_52 Bacilli_gi_544736131 hallmark;refseq 19;18;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Lactococcus Lactococcus lactis subsp. cremoris TIFN1 extrachromosomal linear Cluster_159 Bacilli_gi_544736228 hallmark;refseq 12;10;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Lactococcus Lactococcus lactis subsp. cremoris TIFN1 extrachromosomal linear Cluster_475 Bacilli_gi_544737280 hallmark;refseq 43;35;4;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Lactococcus Lactococcus lactis subsp. cremoris TIFN1 extrachromosomal linear Cluster_199 Bacilli_gi_544761146 hallmark;refseq 30;29;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus SA16 extrachromosomal linear Cluster_6 Bacilli_gi_544761152 hallmark;refseq 40;38;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus SA16 extrachromosomal linear Cluster_35 Bacilli_gi_544761182 refseq 31;29;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus SA16 extrachromosomal linear Cluster_8 Bacilli_gi_544761188 refseq 27;25;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus SA16 extrachromosomal linear Cluster_6 Bacilli_gi_544772894 hallmark;refseq 63;46;4;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus mitis 29/42 extrachromosomal linear Cluster_31 Bacilli_gi_544789347 refseq 28;23;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Lactococcus Lactococcus lactis subsp. cremoris TIFN7 extrachromosomal linear Cluster_195 Bacilli_gi_544790306 hallmark;refseq 16;12;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Lactococcus Lactococcus lactis subsp. cremoris TIFN7 extrachromosomal linear Cluster_17 Bacilli_gi_544790345 hallmark;refseq 53;44;7;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Lactococcus Lactococcus lactis subsp. cremoris TIFN7 extrachromosomal linear Cluster_57 Bacilli_gi_544790728-13659-39639 refseq 32;20;7;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Lactococcus Lactococcus lactis subsp. cremoris TIFN7 prophage linear Cluster_360 Bacilli_gi_544794562 refseq;vdb 17;10;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Lactococcus Lactococcus lactis subsp. cremoris TIFN5 extrachromosomal linear Cluster_199 Bacilli_gi_544794576 hallmark;refseq 18;18;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Lactococcus Lactococcus lactis subsp. cremoris TIFN5 extrachromosomal linear Cluster_159 Bacilli_gi_544794579 hallmark;refseq 10;8;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Lactococcus Lactococcus lactis subsp. cremoris TIFN5 extrachromosomal linear Cluster_475 Bacilli_gi_544795903 hallmark;refseq 21;21;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Lactococcus Lactococcus lactis subsp. lactis bv. diacetylactis str. TIFN4 extrachromosomal linear Cluster_32 Bacilli_gi_544796374 hallmark;refseq 28;25;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Lactococcus Lactococcus lactis subsp. lactis bv. diacetylactis str. TIFN4 extrachromosomal linear Cluster_199 Bacilli_gi_544798797 refseq 18;13;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Lactococcus Lactococcus lactis subsp. cremoris TIFN3 extrachromosomal linear Cluster_195 Bacilli_gi_544798983-62258-92912 hallmark;refseq 46;41;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Lactococcus Lactococcus lactis subsp. lactis bv. diacetylactis str. TIFN2 prophage linear Cluster_32 Bacilli_gi_544844151 hallmark 58;20;9;29 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Paenibacillaceae;Paenibacillus Paenibacillus alvei TS-15 extrachromosomal linear Cluster_48 Bacilli_gi_544846155-64881-105938 refseq;vdb 37;14;8;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Spbetalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Paenibacillaceae;Paenibacillus Paenibacillus alvei TS-15 prophage linear Cluster_489 Bacilli_gi_544867115 refseq 19;11;4;4 Viruses;unclassified;unclassified;unclassified;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes GA41345 extrachromosomal linear Cluster_196 Bacilli_gi_544867302 hallmark;refseq 44;35;4;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes GA41345 extrachromosomal linear Cluster_197 Bacilli_gi_544867478-193-40434 hallmark;refseq 52;47;;5 Viruses;unclassified;unclassified;unclassified;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes GA41345 prophage linear Cluster_70 Bacilli_gi_544872557-209220-241322 hallmark;refseq 35;34;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus S1 prophage linear Cluster_6 Bacilli_gi_544872726-414297-455585 hallmark;refseq 70;68;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus S130 prophage linear Cluster_8 Bacilli_gi_544872756-142244-188113 hallmark;refseq 64;61;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus S130 prophage linear Cluster_6 Bacilli_gi_544887331-41514-77225 hallmark;refseq 53;52;1; Viruses;unclassified;unclassified;unclassified;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes GA40634 prophage linear Cluster_57 Bacilli_gi_544904425 hallmark;refseq 9;7;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus gasseri 2016 extrachromosomal linear Cluster_157 Bacilli_gi_544931045 hallmark;refseq 40;39;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes GA19681 extrachromosomal linear Cluster_57 Bacilli_gi_544931155 refseq 37;26;4;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes GA19681 extrachromosomal linear Cluster_115 Bacilli_gi_544931173 hallmark;refseq 25;19;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes GA19681 extrachromosomal linear Cluster_143 Bacilli_gi_544931225 refseq 21;10;7;4 Viruses;unclassified phages;;;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes GA19681 extrachromosomal linear Cluster_422 Bacilli_gi_544931238 refseq 20;14;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes GA19681 extrachromosomal linear Cluster_378 Bacilli_gi_544931704 hallmark;refseq 18;17;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes GA19681 extrachromosomal linear Cluster_106 Bacilli_gi_544931953 refseq 25;22;;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes UTMEM-1 extrachromosomal linear Cluster_68 Bacilli_gi_544932020-0-32525 hallmark;refseq 43;38;;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes UTMEM-1 prophage linear Cluster_70 Bacilli_gi_544932303-149338-189585 hallmark;refseq 51;46;;5 Viruses;unclassified;unclassified;unclassified;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes UTSW-2 prophage linear Cluster_70 Bacilli_gi_544932354 hallmark;refseq 27;21;;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes UTSW-2 extrachromosomal linear Cluster_65 Bacilli_gi_544941730 hallmark;refseq 22;11;4;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus fermentum 3872 extrachromosomal linear Cluster_42 Bacilli_gi_544942779 hallmark;refseq 49;24;2;23 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus jensenii MD IIE-70(2) extrachromosomal linear Cluster_334 Bacilli_gi_544949633 hallmark;refseq 46;22;5;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus plantarum 2165 extrachromosomal linear Cluster_138 Bacilli_gi_545133163 hallmark;refseq 29;15;1;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus amyloliquefaciens EGD-AQ14 extrachromosomal linear Cluster_55 Bacilli_gi_545133188 hallmark;refseq 29;19;;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus amyloliquefaciens EGD-AQ14 extrachromosomal linear Cluster_55 Bacilli_gi_545133216 hallmark 16;8;5;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus amyloliquefaciens EGD-AQ14 extrachromosomal linear Cluster_105 Bacilli_gi_545378051 hallmark;refseq 35;11;4;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Firmicutes;Bacilli;Bacillales;Paenibacillaceae;Aneurinibacillus Aneurinibacillus aneurinilyticus ATCC 12856 extrachromosomal linear Cluster_105 Bacilli_gi_545381418 hallmark;refseq 68;20;17;31 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Paenibacillaceae;Aneurinibacillus Aneurinibacillus aneurinilyticus ATCC 12856 extrachromosomal linear Cluster_42 Bacilli_gi_545383209 hallmark;refseq 72;29;5;38 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Paenibacillaceae;Aneurinibacillus Aneurinibacillus aneurinilyticus ATCC 12856 extrachromosomal linear Cluster_55 Bacilli_gi_545607155-0-22835 hallmark;refseq 37;27;3;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis E12 prophage linear Cluster_250 Bacilli_gi_545607450 hallmark;refseq 22;17;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes GA06023 extrachromosomal linear Cluster_143 Bacilli_gi_545608552 hallmark;refseq 21;20;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes GA06023 extrachromosomal linear Cluster_90 Bacilli_gi_545633528-1533421-1577662 hallmark;refseq 76;74;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus SA957 prophage linear Cluster_8 Bacilli_gi_545645907 hallmark;refseq 58;30;10;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;unknown;Gemella Gemella bergeriae ATCC 700627 extrachromosomal linear Cluster_57 Bacilli_gi_545669026-54257-93947 hallmark;refseq 52;45;;7 Viruses;unclassified phages;;;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes GA41046 prophage linear Cluster_90 Bacilli_gi_545669324-94008-124660 hallmark;refseq 34;32;;2 Viruses;unclassified;unclassified;unclassified;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes GA41046 prophage linear Cluster_70 Bacilli_gi_546316379-2287-31151 hallmark;refseq 36;20;9;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus licheniformis CG-B52 prophage linear Cluster_105 Bacilli_gi_546316577 refseq 24;15;1;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus licheniformis CG-B52 extrachromosomal linear Cluster_135 Bacilli_gi_547875108-7076-20994 hallmark 30;4;1;25 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus ruminis CAG:367 prophage linear Cluster_143 Bacilli_gi_548186205 hallmark 35;8;2;25 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus sp. CAG:988 extrachromosomal linear Cluster_126 Bacilli_gi_548585805 hallmark;refseq 63;34;5;24 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus shenzhenensis LY-73 extrachromosomal linear Cluster_127 Bacilli_gi_548586763 hallmark;refseq 40;20;3;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus shenzhenensis LY-73 extrachromosomal linear Cluster_50 Bacilli_gi_548587139 hallmark 28;7;6;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus shenzhenensis LY-73 extrachromosomal linear Cluster_565 Bacilli_gi_550697070 refseq 29;18;3;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus plantarum WJL extrachromosomal linear Cluster_32 Bacilli_gi_550915875 hallmark;refseq 16;14;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus casei 5b extrachromosomal linear Cluster_161 Bacilli_gi_551064768 hallmark;refseq 34;18;3;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Bavariicoccus Bavariicoccus seileri DSM 19936 extrachromosomal circular Cluster_31 Bacilli_gi_551717241-407555-460919 hallmark;refseq 80;36;8;36 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus crispatus MV-1A-US prophage linear Cluster_206 Bacilli_gi_552941368-113972-134574 hallmark;refseq 32;29;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis BM4654 prophage linear Cluster_17 Bacilli_gi_552941384-35618-74407 hallmark;refseq 57;54;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis BM4654 prophage linear Cluster_17 Bacilli_gi_552942435 hallmark;refseq 43;26;6;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecium 10/96A extrachromosomal linear Cluster_119 Bacilli_gi_553743182 hallmark;refseq 23;17;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes GA40468 extrachromosomal linear Cluster_143 Bacilli_gi_553743639 hallmark;refseq 37;33;1;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes GA40468 extrachromosomal linear Cluster_70 Bacilli_gi_553743820 hallmark;refseq 23;20;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes GA40468 extrachromosomal linear Cluster_90 Bacilli_gi_553743934 hallmark;refseq 48;44;3;1 Viruses;unclassified;unclassified;unclassified;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes GA19700 extrachromosomal linear Cluster_70 Bacilli_gi_553744112 hallmark;refseq 34;27;4;3 Viruses;unclassified;unclassified;unclassified;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes GA19700 extrachromosomal linear Cluster_143 Bacilli_gi_553744167 hallmark;refseq 29;27;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes GA19700 extrachromosomal linear Cluster_106 Bacilli_gi_553744317 refseq;vdb 20;11;7;2 Viruses;unclassified phages;;;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes GA19700 extrachromosomal linear Cluster_422 Bacilli_gi_553744366 hallmark;refseq 40;36;;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes GA19700 extrachromosomal linear Cluster_68 Bacilli_gi_553744391 refseq 17;13;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes GA19700 extrachromosomal linear Cluster_378 Bacilli_gi_553744498-158659-189280 hallmark;refseq 44;41;;3 Viruses;unclassified phages;;;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes GA41039 prophage linear Cluster_106 Bacilli_gi_553744498-24908-59440 hallmark;refseq 55;52;2;1 Viruses;unclassified;unclassified;unclassified;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes GA41039 prophage linear Cluster_57 Bacilli_gi_553744601 refseq 19;14;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes GA41039 extrachromosomal linear Cluster_378 Bacilli_gi_553744818-158638-191344 hallmark;refseq 49;46;;3 Viruses;unclassified phages;;;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes GA41208 prophage linear Cluster_106 Bacilli_gi_553744818-24886-59420 hallmark;refseq 56;54;2; Viruses;unclassified;unclassified;unclassified;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes GA41208 prophage linear Cluster_57 Bacilli_gi_553744872 refseq 20;13;2;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes GA41208 extrachromosomal linear Cluster_378 Bacilli_gi_553745922-634-32772 hallmark;refseq 56;54;1;1 Viruses;unclassified;unclassified;unclassified;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes GA41394 prophage linear Cluster_57 Bacilli_gi_553746034-14259-49378 hallmark;refseq 45;43;;2 Viruses;unclassified;unclassified;unclassified;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes GA41394 prophage linear Cluster_70 Bacilli_gi_553746053-60563-85045 hallmark;refseq 43;39;;4 Viruses;unclassified phages;;;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes GA41394 prophage linear Cluster_106 Bacilli_gi_553746122-21701-68199 hallmark;refseq 72;55;8;9 Viruses;unclassified;unclassified;unclassified;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes GA41394 prophage linear Cluster_115 Bacilli_gi_553746270-41379-78473 hallmark;refseq 61;44;4;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes GA40377 prophage linear Cluster_115 Bacilli_gi_553746314-0-30920 hallmark;refseq 51;49;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes GA40377 prophage linear Cluster_106 Bacilli_gi_553746457-39216-73171 hallmark;refseq 53;50;2;1 Viruses;unclassified;unclassified;unclassified;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes GA03805 prophage linear Cluster_57 Bacilli_gi_553746535 hallmark;refseq 14;12;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes GA03805 extrachromosomal linear Cluster_422 Bacilli_gi_554463091-1712679-1752535 hallmark;refseq 59;49;1;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Lactococcus Lactococcus lactis subsp. lactis KLDS 4.0325 prophage linear Cluster_159 Bacilli_gi_554463091-2339878-2374886 hallmark;refseq 50;38;7;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Lactococcus Lactococcus lactis subsp. lactis KLDS 4.0325 prophage linear Cluster_356 Bacilli_gi_554642795-1151330-1192475 hallmark;refseq 63;59;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus Z172 prophage linear Cluster_8 Bacilli_gi_554764098-22736-94690 refseq 41;27;6;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Lactococcus Lactococcus lactis subsp. lactis Dephy 1 prophage linear Cluster_360 Bacilli_gi_554764220 hallmark;refseq 27;21;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Lactococcus Lactococcus lactis subsp. lactis Dephy 1 extrachromosomal linear Cluster_90 Bacilli_gi_554764460 hallmark;refseq 25;23;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Lactococcus Lactococcus lactis subsp. lactis Dephy 1 extrachromosomal linear Cluster_32 Bacilli_gi_554764669-0-32411 hallmark;refseq 54;37;4;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Lactococcus Lactococcus lactis subsp. lactis Dephy 1 prophage linear Cluster_30 Bacilli_gi_554764690 hallmark;refseq 27;24;;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Lactococcus Lactococcus lactis subsp. lactis Dephy 1 extrachromosomal linear Cluster_17 Bacilli_gi_556501617 hallmark;refseq 25;17;5;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Lactococcus Lactococcus lactis subsp. lactis bv. diacetylactis str. LD61 extrachromosomal linear Cluster_356 Bacilli_gi_556501634 hallmark;refseq 21;20;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Lactococcus Lactococcus lactis subsp. lactis bv. diacetylactis str. LD61 extrachromosomal linear Cluster_32 Bacilli_gi_556501639 hallmark;refseq 27;24;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Lactococcus Lactococcus lactis subsp. lactis bv. diacetylactis str. LD61 extrachromosomal linear Cluster_199 Bacilli_gi_556589855-694981-736805 hallmark;refseq 69;55;5;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus pasteuri SP1 prophage linear Cluster_8 Bacilli_gi_556912645 hallmark;refseq 54;32;4;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus helveticus CIRM-BIA 951 extrachromosomal linear Cluster_52 Bacilli_gi_556912837 hallmark;refseq 60;46;2;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus helveticus CIRM-BIA 104 extrachromosomal circular Cluster_141 Bacilli_gi_557375084 hallmark;refseq 46;42;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae BHN191 extrachromosomal linear Cluster_52 Bacilli_gi_557375515-0-31859 hallmark;refseq 62;35;4;23 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae BHN191 prophage linear Cluster_50 Bacilli_gi_557375634 hallmark;refseq 47;46;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae BHN237 extrachromosomal linear Cluster_52 Bacilli_gi_557375928 hallmark;refseq 54;35;5;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae BHN237 extrachromosomal linear Cluster_50 Bacilli_gi_557376294-7048-41204 hallmark;refseq 48;33;3;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae BHN427 prophage linear Cluster_50 Bacilli_gi_558555772-623306-667455 hallmark;refseq 64;57;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus PSP1996 prophage linear Cluster_8 Bacilli_gi_558555864-163710-206447 hallmark;refseq 51;48;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus PSP1996 prophage linear Cluster_6 Bacilli_gi_558684320 hallmark;refseq 57;35;6;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus thuringiensis YBT-1518 extrachromosomal linear Cluster_119 Bacilli_gi_559191496 refseq 21;12;4;5 Viruses;dsDNA viruses no RNA stage;unclassified;unclassified;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus epidermidis CIM37 extrachromosomal linear Cluster_331 Bacilli_gi_560222377 refseq 18;10;3;5 Viruses;dsDNA viruses no RNA stage;unclassified;unclassified;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus epidermidis APO27 extrachromosomal linear Cluster_331 Bacilli_gi_560223291 refseq 21;12;4;5 Viruses;dsDNA viruses no RNA stage;unclassified;unclassified;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus epidermidis MC28 extrachromosomal linear Cluster_331 Bacilli_gi_560272834-43857-68122 hallmark;refseq 38;37;1; Viruses;unclassified;unclassified;unclassified;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes GA03455 prophage linear Cluster_57 Bacilli_gi_560273519 hallmark;refseq 48;36;6;6 Viruses;unclassified phages;;;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes GA03455 extrachromosomal linear Cluster_115 Bacilli_gi_560274507-0-32071 hallmark;refseq 42;37;2;3 Viruses;unclassified;unclassified;unclassified;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes GA03455 prophage linear Cluster_90 Bacilli_gi_560277320-21734-61260 hallmark;refseq 59;57;1;1 Viruses;unclassified phages;;;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes GA03799 prophage linear Cluster_68 Bacilli_gi_560288363 hallmark;refseq 23;18;;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes GA03747 extrachromosomal linear Cluster_70 Bacilli_gi_560289780 hallmark;refseq 23;20;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes GA03747 extrachromosomal linear Cluster_90 Bacilli_gi_560289884 hallmark;refseq 29;23;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes GA03747 extrachromosomal linear Cluster_143 Bacilli_gi_560289971 hallmark;refseq 23;22;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes GA03747 extrachromosomal linear Cluster_70 Bacilli_gi_560291587 hallmark;refseq 51;48;;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes GA03747 extrachromosomal linear Cluster_30 Bacilli_gi_560293512-94432-134682 hallmark;refseq 52;47;;5 Viruses;unclassified;unclassified;unclassified;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes GA19702 prophage linear Cluster_70 Bacilli_gi_560294481 hallmark;vdb 80;4;53;23 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes GA19702 extrachromosomal linear Cluster_20 Bacilli_gi_560295271-60173-102174 hallmark;refseq 58;48;1;9 Viruses;unclassified;unclassified;unclassified;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes GA19702 prophage linear Cluster_106 Bacilli_gi_564753172 hallmark 27;9;6;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus sp. CPSM8 extrachromosomal linear Cluster_55 Bacilli_gi_564801365 hallmark;refseq 23;13;3;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus equi DPC 6820 extrachromosomal linear Cluster_52 Bacilli_gi_564802417 refseq 8;5;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus equi DPC 6820 extrachromosomal linear Cluster_0 Bacilli_gi_564811070 hallmark;refseq 20;16;1;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus equi DPC 6820 extrachromosomal linear Cluster_41 Bacilli_gi_564812418 refseq 33;14;1;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus equi DPC 6820 extrachromosomal linear Cluster_8 Bacilli_gi_564812632 hallmark;refseq 16;14;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus equi DPC 6820 extrachromosomal linear Cluster_30 Bacilli_gi_565633412 hallmark;refseq 30;17;4;9 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis PF3 extrachromosomal linear Cluster_145 Bacilli_gi_565634353 hallmark;refseq 23;22;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis PF3 extrachromosomal linear Cluster_41 Bacilli_gi_565636128 hallmark;refseq 43;31;5;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus Enterococcus faecalis PF3 extrachromosomal linear Cluster_29 Bacilli_gi_565801942-36621-52109 refseq 32;16;2;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus thuringiensis serovar aizawai str. Leapi01 prophage linear Cluster_234 Bacilli_gi_565801945 refseq 26;17;2;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus thuringiensis serovar aizawai str. Leapi01 extrachromosomal linear Cluster_269 Bacilli_gi_565802131 hallmark;refseq 33;24;2;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus thuringiensis serovar aizawai str. Leapi01 extrachromosomal linear Cluster_76 Bacilli_gi_565802287 hallmark;refseq 30;21;1;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus thuringiensis serovar aizawai str. Leapi01 extrachromosomal linear Cluster_30 Bacilli_gi_565802304 hallmark;refseq 50;32;6;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus thuringiensis serovar aizawai str. Leapi01 extrachromosomal linear Cluster_234 Bacilli_gi_565802559-2241-30926 hallmark;refseq 51;33;3;15 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus thuringiensis serovar aizawai str. Hu4-2 prophage linear Cluster_269 Bacilli_gi_565802561 hallmark;refseq 36;25;4;7 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus thuringiensis serovar aizawai str. Hu4-2 extrachromosomal linear Cluster_269 Bacilli_gi_565802584 refseq 35;23;5;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Spounalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus thuringiensis serovar aizawai str. Hu4-2 extrachromosomal linear Cluster_116 Bacilli_gi_565802644 hallmark;refseq 29;21;2;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus thuringiensis serovar aizawai str. Hu4-2 extrachromosomal linear Cluster_76 Bacilli_gi_565802656 hallmark;refseq 25;18;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus thuringiensis serovar aizawai str. Hu4-2 extrachromosomal linear Cluster_30 Bacilli_gi_565802658 hallmark;refseq 25;13;3;9 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus thuringiensis serovar aizawai str. Hu4-2 extrachromosomal linear Cluster_439 Bacilli_gi_565802818 hallmark;refseq 25;23;;2 Viruses;dsDNA viruses no RNA stage;unknown;Tectiviridae;Tectivirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus thuringiensis serovar aizawai str. Hu4-2 extrachromosomal linear Cluster_125 Bacilli_gi_565849049 hallmark;refseq 39;29;2;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae 27 extrachromosomal linear Cluster_31 Bacilli_gi_565849072 hallmark;refseq 25;16;3;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pneumoniae 27 extrachromosomal linear Cluster_50 Bacilli_gi_565851255 hallmark;refseq 29;18;5;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pseudopneumoniae G42 extrachromosomal linear Cluster_50 Bacilli_gi_565851319 hallmark;refseq 24;19;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pseudopneumoniae G42 extrachromosomal linear Cluster_30 Bacilli_gi_565854653 hallmark;refseq 55;40;2;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pseudopneumoniae 22725 extrachromosomal linear Cluster_31 Bacilli_gi_565854743 hallmark;refseq 42;29;4;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pseudopneumoniae 22725 extrachromosomal linear Cluster_50 Bacilli_gi_565858025-8013-50395 hallmark;refseq;vdb 74;47;4;23 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pseudopneumoniae 5247 prophage linear Cluster_30 Bacilli_gi_565866318 hallmark;refseq 73;52;7;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus mitis 27/7 extrachromosomal linear Cluster_15 Bacilli_gi_565881249-19297-37551 hallmark;refseq 26;15;3;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Paenibacillaceae;Paenibacillus Paenibacillus sp. JCM 10914 prophage linear Cluster_15 Bacilli_gi_565885379 hallmark;refseq 70;32;6;32 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Paenibacillaceae;Paenibacillus Paenibacillus sp. JCM 10914 extrachromosomal linear Cluster_30 Bacilli_gi_565886297 noncaudo;vdb 12;;3;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Paenibacillaceae;Paenibacillus Paenibacillus sp. JCM 10914 extrachromosomal linear Cluster_594 Bacilli_gi_566131514 hallmark;refseq 58;29;3;26 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus plantarum 4_3 extrachromosomal circular Cluster_491 Bacilli_gi_566131765-19584-59097 hallmark;refseq;vdb 52;30;5;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus plantarum 4_3 prophage linear Cluster_157 Bacilli_gi_566158812 hallmark;refseq 43;18;10;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus fermentum NB-22 extrachromosomal linear Cluster_41 Bacilli_gi_566172474-988768-1034355 hallmark;refseq 68;64;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus KPL1845 prophage linear Cluster_6 Bacilli_gi_56808948 hallmark;refseq 45;42;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes M49 591 extrachromosomal linear Cluster_197 Bacilli_gi_568179610-5447-60563 hallmark;refseq;vdb 81;42;9;30 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus thuringiensis serovar tenebrionis str. YBT-1765 prophage linear Cluster_234 Bacilli_gi_56973315 hallmark;refseq 25;22;;3 Viruses;dsDNA viruses no RNA stage;unknown;Tectiviridae;Tectivirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus cereus ATCC 14579 extrachromosomal linear Cluster_125 Bacilli_gi_575529750 hallmark;refseq 75;59;;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus rhamnosus 2166 extrachromosomal linear Cluster_32 Bacilli_gi_575668271 hallmark;refseq 24;12;3;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus crispatus 2029 extrachromosomal linear Cluster_206 Bacilli_gi_575668283 hallmark;refseq 26;13;4;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus Lactobacillus crispatus 2029 extrachromosomal linear Cluster_206 Bacilli_gi_57650036-354760-397541 hallmark;refseq 71;70;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus COL prophage linear Cluster_6 Bacilli_gi_70725001-1807036-1855693 hallmark;refseq 65;43;10;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus haemolyticus JCSC1435 prophage linear Cluster_40 Bacilli_gi_71902667-1227073-1269153 hallmark;refseq 66;63;1;2 Viruses;unclassified;unclassified;unclassified;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes MGAS6180 prophage linear Cluster_106 Bacilli_gi_71902667-988437-1032366 hallmark;refseq 68;49;6;13 Viruses;unclassified;unclassified;unclassified;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes MGAS6180 prophage linear Cluster_115 Bacilli_gi_71909814-1385736-1425984 hallmark;refseq 51;46;;5 Viruses;unclassified;unclassified;unclassified;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes MGAS5005 prophage linear Cluster_70 Bacilli_gi_71909814-983899-1021692 hallmark;refseq 60;50;4;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes MGAS5005 prophage linear Cluster_196 Bacilli_gi_75759441 noncaudo 31;8;2;21 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unclassified Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus thuringiensis serovar israelensis ATCC 35646 extrachromosomal linear unclustered Bacilli_gi_75760763 hallmark;refseq 22;22;; Viruses;dsDNA viruses no RNA stage;unknown;Tectiviridae;Tectivirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus thuringiensis serovar israelensis ATCC 35646 extrachromosomal linear Cluster_125 Bacilli_gi_75760807 noncaudo 14;6;2;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus thuringiensis serovar israelensis ATCC 35646 extrachromosomal linear Cluster_42 Bacilli_gi_75760979 hallmark 13;6;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus thuringiensis serovar israelensis ATCC 35646 extrachromosomal linear Cluster_241 Bacilli_gi_75761324 refseq 8;6;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus thuringiensis serovar israelensis ATCC 35646 extrachromosomal linear Cluster_76 Bacilli_gi_76798615 hallmark;refseq 16;16;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae 18RS21 extrachromosomal linear Cluster_30 Bacilli_gi_76798649 refseq 12;8;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;C2likevirus;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae 18RS21 extrachromosomal linear Cluster_65 Bacilli_gi_77405268-13648-44448 hallmark;refseq 43;34;1;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae H36B prophage linear Cluster_88 Bacilli_gi_77411234-0-24805 hallmark;refseq;vdb 26;14;6;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae CJB111 prophage linear Cluster_20 Bacilli_gi_77412059 hallmark 22;8;6;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae CJB111 extrachromosomal linear Cluster_20 Bacilli_gi_77413447 hallmark;refseq;vdb 37;17;12;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae 515 extrachromosomal linear Cluster_30 Bacilli_gi_77414309 refseq 38;21;1;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus agalactiae 515 extrachromosomal linear Cluster_65 Bacilli_gi_82749777-1830601-1887201 hallmark;refseq 77;71;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus RF122 prophage linear Cluster_337 Bacilli_gi_87159884-1545711-1593160 hallmark;refseq 66;63;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus USA300_FPR3757 prophage linear Cluster_6 Bacilli_gi_88193823-1462346-1508522 hallmark;refseq 67;64;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus Staphylococcus aureus subsp. aureus NCTC 8325 prophage linear Cluster_6 Bacilli_gi_94987631-1380189-1420438 hallmark;refseq 51;46;;5 Viruses;unclassified;unclassified;unclassified;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes MGAS9429 prophage linear Cluster_70 Bacilli_gi_94987631-776515-817684 hallmark;refseq 57;43;7;7 Viruses;unclassified;unclassified;unclassified;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes MGAS9429 prophage linear Cluster_115 Bacilli_gi_94989509-1254657-1296251 hallmark;refseq 65;62;1;2 Viruses;unclassified;unclassified;unclassified;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes MGAS10270 prophage linear Cluster_106 Bacilli_gi_94989509-528607-570690 hallmark;refseq 65;55;1;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes MGAS10270 prophage linear Cluster_68 Bacilli_gi_94991497-1404079-1444328 hallmark;refseq 51;46;;5 Viruses;unclassified;unclassified;unclassified;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes MGAS2096 prophage linear Cluster_70 Bacilli_gi_94991497-531482-570812 hallmark;refseq 48;42;;6 Viruses;unclassified;unclassified;unclassified;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes MGAS2096 prophage linear Cluster_90 Bacilli_gi_94993396-1220823-1256538 hallmark;refseq 54;52;1;1 Viruses;unclassified;unclassified;unclassified;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes MGAS10750 prophage linear Cluster_57 Bacilli_gi_94993396-546006-587868 hallmark;refseq 65;53;1;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus Streptococcus pyogenes MGAS10750 prophage linear Cluster_68 Bacteroidia_gi_223954434-0-61099 hallmark 78;18;13;47 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Bacteroidetes;Bacteroidia;Bacteroidales;Bacteroidaceae;Bacteroides Bacteroides coprocola DSM 17136 prophage linear Cluster_314 Bacteroidia_gi_223955873-76047-133444 hallmark;refseq;vdb 74;19;7;48 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Bacteroidetes;Bacteroidia;Bacteroidales;Bacteroidaceae;Bacteroides Bacteroides stercoris ATCC 43183 prophage linear Cluster_316 Bacteroidia_gi_224485592 hallmark 46;11;9;26 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Bacteroidetes;Bacteroidia;Bacteroidales;Bacteroidaceae;Bacteroides Bacteroides sp. 2_2_4 extrachromosomal linear Cluster_113 Bacteroidia_gi_260885173 hallmark 42;7;11;24 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Bacteroidetes;Bacteroidia;Bacteroidales;Prevotellaceae;Prevotella Prevotella bergensis DSM 17361 extrachromosomal linear Cluster_113 Bacteroidia_gi_282878098 hallmark 25;7;4;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Bacteroidetes;Bacteroidia;Bacteroidales;Prevotellaceae;Prevotella Prevotella buccalis ATCC 35310 extrachromosomal linear Cluster_305 Bacteroidia_gi_282879408 refseq 21;10;;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Bacteroidetes;Bacteroidia;Bacteroidales;Prevotellaceae;Prevotella Prevotella buccalis ATCC 35310 extrachromosomal linear Cluster_314 Bacteroidia_gi_282879960-10239-76617 hallmark 98;16;17;65 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Bacteroidetes;Bacteroidia;Bacteroidales;Prevotellaceae;Prevotella Prevotella timonensis CRIS 5C-B1 prophage linear Cluster_314 Bacteroidia_gi_293372186 hallmark 44;11;7;26 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Bacteroidetes;Bacteroidia;Bacteroidales;Bacteroidaceae;Bacteroides Bacteroides ovatus SD CMC 3f extrachromosomal linear Cluster_4 Bacteroidia_gi_293372908-329-57889 hallmark;vdb 61;15;15;31 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Bacteroidetes;Bacteroidia;Bacteroidales;Bacteroidaceae;Bacteroides Bacteroides ovatus SD CMC 3f prophage linear Cluster_320 Bacteroidia_gi_294644793 hallmark 45;12;9;24 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Bacteroidetes;Bacteroidia;Bacteroidales;Bacteroidaceae;Bacteroides Bacteroides xylanisolvens SD CC 2a extrachromosomal linear Cluster_320 Bacteroidia_gi_298484481 refseq;vdb 7;;3;4 Bacteria;Bacteroidetes;Bacteroidia;Bacteroidales;Bacteroidaceae;Bacteroides Bacteroides sp. D22 extrachromosomal circular Cluster_246 Bacteroidia_gi_303237911 refseq;vdb 21;5;7;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Bacteroidetes;Bacteroidia;Bacteroidales;Prevotellaceae;Prevotella Prevotella disiens FB035-09AN extrachromosomal linear Cluster_113 Bacteroidia_gi_307564858 hallmark 47;8;5;34 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Bacteroidetes;Bacteroidia;Bacteroidales;Prevotellaceae;Prevotella Prevotella amnii CRIS 21A-A extrachromosomal linear Cluster_468 Bacteroidia_gi_319430465 refseq;vdb 7;;3;4 Bacteria;Bacteroidetes;Bacteroidia;Bacteroidales;Bacteroidaceae;Bacteroides Bacteroides eggerthii 1_2_48FAA extrachromosomal circular Cluster_246 Bacteroidia_gi_325672487 hallmark 45;7;7;31 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Bacteroidetes;Bacteroidia;Bacteroidales;Prevotellaceae;Prevotella Prevotella multiformis DSM 16608 extrachromosomal linear Cluster_113 Bacteroidia_gi_329959038 refseq;vdb 8;;3;5 Bacteria;Bacteroidetes;Bacteroidia;Bacteroidales;Bacteroidaceae;Bacteroides Bacteroides clarus YIT 12056 extrachromosomal circular Cluster_246 Bacteroidia_gi_330998596-63767-111518 hallmark;refseq;vdb 55;11;9;35 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Bacteroidetes;Bacteroidia;Bacteroidales;Prevotellaceae;Paraprevotella Paraprevotella xylaniphila YIT 11841 prophage linear Cluster_305 Bacteroidia_gi_333463429 hallmark 62;13;9;40 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Tunalikevirus;unknown Bacteria;Bacteroidetes;Bacteroidia;Bacteroidales;Porphyromonadaceae;Dysgonomonas Dysgonomonas mossii DSM 22836 extrachromosomal linear Cluster_502 Bacteroidia_gi_333463430 hallmark 30;6;3;21 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Bacteroidetes;Bacteroidia;Bacteroidales;Porphyromonadaceae;Dysgonomonas Dysgonomonas mossii DSM 22836 extrachromosomal linear Cluster_583 Bacteroidia_gi_336407417-186642-243729 hallmark;refseq;vdb 75;19;6;50 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Bacteroidetes;Bacteroidia;Bacteroidales;Bacteroidaceae;Bacteroides Bacteroides sp. 1_1_30 prophage linear Cluster_316 Bacteroidia_gi_345651594 refseq;vdb 7;;3;4 Bacteria;Bacteroidetes;Bacteroidia;Bacteroidales;Bacteroidaceae;Bacteroides Bacteroides sp. D1 extrachromosomal circular Cluster_246 Bacteroidia_gi_357048603 hallmark 65;13;14;38 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Bacteroidetes;Bacteroidia;Bacteroidales;Prevotellaceae;Paraprevotella Paraprevotella clara YIT 11840 extrachromosomal linear Cluster_305 Bacteroidia_gi_423221334 refseq;vdb 7;;3;4 Bacteria;Bacteroidetes;Bacteroidia;Bacteroidales;Bacteroidaceae;Bacteroides Bacteroides caccae CL03T12C61 extrachromosomal circular Cluster_246 Bacteroidia_gi_423226541-377453-434592 hallmark;refseq;vdb 79;21;7;51 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Bacteroidetes;Bacteroidia;Bacteroidales;Bacteroidaceae;Bacteroides Bacteroides cellulosilyticus CL02T12C19 prophage linear Cluster_316 Bacteroidia_gi_423242675 refseq;vdb 7;;3;4 Bacteria;Bacteroidetes;Bacteroidia;Bacteroidales;Bacteroidaceae;Bacteroides Bacteroides dorei CL03T12C01 extrachromosomal circular Cluster_246 Bacteroidia_gi_423298705 hallmark 38;6;1;31 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Bacteroidetes;Bacteroidia;Bacteroidales;Bacteroidaceae;Bacteroides Bacteroides ovatus CL03T12C18 extrachromosomal linear unclustered Bacteroidia_gi_423298785 refseq;vdb 7;;3;4 Bacteria;Bacteroidetes;Bacteroidia;Bacteroidales;Bacteroidaceae;Bacteroides Bacteroides ovatus CL03T12C18 extrachromosomal circular Cluster_246 Bacteroidia_gi_423298834-868952-940205 hallmark;refseq;vdb 84;19;16;49 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Bacteroidetes;Bacteroidia;Bacteroidales;Bacteroidaceae;Bacteroides Bacteroides finegoldii CL09T03C10 prophage linear Cluster_320 Bacteroidia_gi_423312783-668033-724965 hallmark;vdb 78;22;4;52 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Bacteroidetes;Bacteroidia;Bacteroidales;Bacteroidaceae;Bacteroides Bacteroides vulgatus CL09T03C04 prophage linear Cluster_316 Bacteroidia_gi_482849993-161755-233136 hallmark;refseq;vdb 84;19;16;49 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Bacteroidetes;Bacteroidia;Bacteroidales;Bacteroidaceae;Bacteroides Bacteroides finegoldii CL09T03C10 prophage linear Cluster_320 Bacteroidia_gi_483488487 refseq;vdb 19;4;3;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Bacteroidetes;Bacteroidia;Bacteroidales;Porphyromonadaceae;Porphyromonas Porphyromonas levii DSM 23370 extrachromosomal linear Cluster_113 Bacteroidia_gi_483874715 hallmark 20;3;4;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Bacteroidetes;Bacteroidia;Bacteroidales;Bacteroidaceae;Bacteroides Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM 13223 extrachromosomal linear Cluster_468 Bacteroidia_gi_484001862 hallmark 52;6;9;37 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Bacteroidetes;Bacteroidia;Bacteroidales;Bacteroidaceae;Bacteroides Bacteroides gallinarum DSM 18171 extrachromosomal linear Cluster_113 Bacteroidia_gi_484063615 hallmark 19;4;3;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Bacteroidetes;Bacteroidia;Bacteroidales;Prevotellaceae;Prevotella Prevotella oris DSM 18711 extrachromosomal linear Cluster_113 Bacteroidia_gi_484064245 hallmark;refseq 77;22;8;47 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Bacteroidetes;Bacteroidia;Bacteroidales;Rikenellaceae;Alistipes Candidatus Alistipes marseilloanorexicus AP11 extrachromosomal linear Cluster_314 Bacteroidia_gi_484226193 hallmark 47;11;8;28 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Tunalikevirus;unknown Bacteria;Bacteroidetes;Bacteroidia;Bacteroidales;Porphyromonadaceae;Dysgonomonas Dysgonomonas mossii DSM 22836 extrachromosomal linear Cluster_502 Bacteroidia_gi_484226199 hallmark 22;4;1;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Bacteroidetes;Bacteroidia;Bacteroidales;Porphyromonadaceae;Dysgonomonas Dysgonomonas mossii DSM 22836 extrachromosomal linear Cluster_583 Bacteroidia_gi_484227712 refseq;vdb 34;4;11;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Bacteroidetes;Bacteroidia;Bacteroidales;Porphyromonadaceae;Porphyromonas Porphyromonas bennonis DSM 23058 extrachromosomal linear Cluster_113 Bacteroidia_gi_484228023-6337-29623 hallmark 24;6;2;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Bacteroidetes;Bacteroidia;Bacteroidales;Bacteroidaceae;Bacteroides Bacteroides propionicifaciens DSM 19291 prophage linear Cluster_4 Bacteroidia_gi_512436205-47427-103478 hallmark;vdb 76;23;4;49 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Bacteroidetes;Bacteroidia;Bacteroidales;Bacteroidaceae;Bacteroides Bacteroides massiliensis dnLKV3 prophage linear Cluster_316 Bacteroidia_gi_545434946 hallmark 51;7;19;25 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Bacteroidetes;Bacteroidia;Bacteroidales;Prevotellaceae;Prevotella Prevotella sp. F0091 extrachromosomal linear Cluster_113 Bacteroidia_gi_545439055 hallmark;refseq 35;12;7;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Bacteroidetes;Bacteroidia;Bacteroidales;Porphyromonadaceae;Porphyromonas Porphyromonas gingivalis F0185 extrachromosomal linear Cluster_315 Bacteroidia_gi_545442110 hallmark;refseq 36;13;4;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Bacteroidetes;Bacteroidia;Bacteroidales;Porphyromonadaceae;Porphyromonas Porphyromonas gingivalis W4087 extrachromosomal linear Cluster_315 Bacteroidia_gi_546189476 hallmark;noncaudo 7;3;;4 Viruses;unclassified;unclassified;unclassified;unclassified;unclassified Bacteria;Bacteroidetes;Bacteroidia;Bacteroidales;Prevotellaceae;Prevotella Prevotella salivae F0493 extrachromosomal linear unclustered Bacteroidia_gi_546368108 refseq;vdb 23;5;7;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Bacteroidetes;Bacteroidia;Bacteroidales;Prevotellaceae;Prevotella Prevotella sp. CAG:1058 extrachromosomal linear Cluster_113 Bacteroidia_gi_546393220 hallmark 21;5;5;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Bacteroidetes;Bacteroidia;Bacteroidales;Prevotellaceae;Prevotella Prevotella sp. CAG:255 extrachromosomal linear Cluster_305 Bacteroidia_gi_547185581 hallmark;refseq 4;3;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;C2likevirus;unknown Bacteria;Bacteroidetes;Bacteroidia;Bacteroidales;Rikenellaceae;Alistipes Alistipes sp. CAG:831 extrachromosomal linear Cluster_315 Bacteroidia_gi_547226449-10313-16392 hallmark;noncaudo 5;1;2;2 Viruses;ssDNA viruses;unknown;Microviridae;Chlamydiamicrovirus;unknown Bacteria;Bacteroidetes;Bacteroidia;Bacteroidales;Prevotellaceae;Prevotella Prevotella sp. CAG:1185 prophage linear unclustered Bacteroidia_gi_547233352 hallmark;refseq 21;7;1;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;Phi29likevirus;unknown Bacteria;Bacteroidetes;Bacteroidia;Bacteroidales;Bacteroidaceae;Bacteroides Bacteroides sp. CAG:1076 extrachromosomal linear Cluster_182 Bacteroidia_gi_547251048 hallmark 21;6;2;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Bacteroidetes;Bacteroidia;Bacteroidales;Porphyromonadaceae;Odoribacter Odoribacter sp. CAG:788 extrachromosomal linear Cluster_357 Bacteroidia_gi_547256306 refseq;vdb 15;5;1;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;T4likevirus;unknown Bacteria;Bacteroidetes;Bacteroidia;Bacteroidales;Prevotellaceae;Prevotella Prevotella sp. CAG:1092 extrachromosomal linear Cluster_304 Bacteroidia_gi_547256905 hallmark 37;5;5;27 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Bacteroidetes;Bacteroidia;Bacteroidales;Prevotellaceae;Prevotella Prevotella sp. CAG:487 extrachromosomal linear Cluster_113 Bacteroidia_gi_547321470 refseq 28;8;4;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Bacteroidetes;Bacteroidia;Bacteroidales;Bacteroidaceae;Bacteroides Bacteroides plebeius CAG:211 extrachromosomal linear Cluster_320 Bacteroidia_gi_547330701 hallmark;vdb 14;3;2;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Bacteroidetes;Bacteroidia;Bacteroidales;Rikenellaceae;Alistipes Alistipes sp. CAG:53 extrachromosomal linear unclustered Bacteroidia_gi_547880191 hallmark 43;6;9;28 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Bacteroidetes;Bacteroidia;Bacteroidales;Bacteroidaceae;Bacteroides Bacteroides sp. CAG:770 extrachromosomal linear Cluster_113 Bacteroidia_gi_547897726 hallmark;refseq 25;8;3;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Bacteroidetes;Bacteroidia;Bacteroidales;Bacteroidaceae;Bacteroides Bacteroides faecis CAG:32 extrachromosomal linear Cluster_315 Bacteroidia_gi_547906417 hallmark 36;6;7;23 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Bacteroidetes;Bacteroidia;Bacteroidales;Prevotellaceae;Prevotella Prevotella sp. CAG:474 extrachromosomal linear Cluster_113 Bacteroidia_gi_547920081-1836-3955 hallmark;noncaudo 2;1;;1 Viruses;ssDNA viruses;unknown;Microviridae;Chlamydiamicrovirus;unknown Bacteria;Bacteroidetes;Bacteroidia;Bacteroidales;Porphyromonadaceae;Parabacteroides Parabacteroides merdae CAG:48 prophage linear unclustered Bacteroidia_gi_547939309 hallmark;refseq 94;21;27;46 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Bacteroidetes;Bacteroidia;Bacteroidales;Bacteroidaceae;Bacteroides Bacteroides sp. CAG:714 extrachromosomal linear Cluster_305 Bacteroidia_gi_548179961 hallmark;refseq 60;20;5;35 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Bacteroidetes;Bacteroidia;Bacteroidales;Bacteroidaceae;Bacteroides Bacteroides uniformis CAG:3 extrachromosomal linear Cluster_315 Bacteroidia_gi_548235121 hallmark 38;9;4;25 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Bacteroidetes;Bacteroidia;Bacteroidales;Prevotellaceae;Prevotella Prevotella sp. CAG:873 extrachromosomal linear Cluster_468 Bacteroidia_gi_548242387 hallmark;refseq;vdb 17;8;3;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Bacteroidetes;Bacteroidia;Bacteroidales;Rikenellaceae;Alistipes Alistipes putredinis CAG:67 extrachromosomal linear Cluster_22 Bacteroidia_gi_557506781 hallmark;refseq 30;9;3;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Bacteroidetes;Bacteroidia;Bacteroidales;Prevotellaceae;Prevotella Prevotella sp. CAG:1031 extrachromosomal linear Cluster_440 Betaproteobacteria_gi_120608714-2556822-2610901 hallmark;refseq 62;22;4;36 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Comamonadaceae;Acidovorax Acidovorax citrulli AAC00-1 prophage linear Cluster_205 Betaproteobacteria_gi_120608714-2613045-2631508 hallmark;refseq 31;7;7;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Comamonadaceae;Acidovorax Acidovorax citrulli AAC00-1 prophage linear Cluster_14 Betaproteobacteria_gi_126438353-3804855-3815466 refseq 13;5;3;5 Viruses;unclassified;unclassified;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia Burkholderia pseudomallei 668 prophage linear Cluster_128 Betaproteobacteria_gi_134283347-137806-150093 noncaudo 15;8;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia Burkholderia pseudomallei 305 prophage linear Cluster_128 Betaproteobacteria_gi_134287418 hallmark;refseq 122;33;17;72 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia Burkholderia vietnamiensis G4 extrachromosomal linear Cluster_66 Betaproteobacteria_gi_134294128-1387052-1421353 hallmark;refseq 48;27;9;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia Burkholderia vietnamiensis G4 prophage linear Cluster_39 Betaproteobacteria_gi_149127391 refseq 25;18;;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia Burkholderia thailandensis TXDOH extrachromosomal linear Cluster_4 Betaproteobacteria_gi_149127571-0-37136 hallmark;refseq 50;41;2;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia Burkholderia thailandensis TXDOH prophage linear Cluster_4 Betaproteobacteria_gi_149131732-174-6650 noncaudo 10;2;5;3 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia Burkholderia thailandensis TXDOH prophage linear Cluster_128 Betaproteobacteria_gi_149132582-8449-46271 hallmark;refseq;vdb 54;44;2;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia Burkholderia ubonensis Bu prophage linear Cluster_0 Betaproteobacteria_gi_149141527 hallmark;refseq 32;29;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia Burkholderia ubonensis Bu extrachromosomal linear Cluster_0 Betaproteobacteria_gi_149146001 hallmark;refseq 26;25;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia Burkholderia oklahomensis EO147 extrachromosomal linear Cluster_0 Betaproteobacteria_gi_149146613-0-50926 hallmark;refseq 66;57;3;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia Burkholderia oklahomensis EO147 prophage linear Cluster_4 Betaproteobacteria_gi_149146715 refseq 20;9;5;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia Burkholderia oklahomensis EO147 extrachromosomal linear Cluster_28 Betaproteobacteria_gi_149147175-14021-26284 noncaudo 14;4;4;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Spounalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia Burkholderia oklahomensis C6786 prophage linear Cluster_128 Betaproteobacteria_gi_149147175-2605-14057 noncaudo 14;5;1;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia Burkholderia oklahomensis C6786 prophage linear Cluster_463 Betaproteobacteria_gi_149147508-19387-29661 noncaudo 15;7;3;5 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia Burkholderia oklahomensis C6786 prophage linear Cluster_128 Betaproteobacteria_gi_149148107-30109-66630 hallmark;refseq 50;23;9;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia Burkholderia thailandensis Bt4 prophage linear Cluster_0 Betaproteobacteria_gi_149148269 refseq;vdb 8;4;2;2 Viruses;unclassified;unclassified;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia Burkholderia thailandensis Bt4 extrachromosomal linear Cluster_128 Betaproteobacteria_gi_149148298-4988-10027 noncaudo 6;3;1;2 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia Burkholderia thailandensis Bt4 prophage linear Cluster_128 Betaproteobacteria_gi_149148314-10182-42232 hallmark;refseq 48;47;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia Burkholderia thailandensis Bt4 prophage linear Cluster_21 Betaproteobacteria_gi_149152531 hallmark;refseq 13;7;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia Burkholderia pseudomallei 14 extrachromosomal linear Cluster_0 Betaproteobacteria_gi_149152543 refseq 39;15;6;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia Burkholderia pseudomallei 14 extrachromosomal linear Cluster_0 Betaproteobacteria_gi_149152605-16292-33070 hallmark;refseq 22;22;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia Burkholderia pseudomallei 91 prophage linear Cluster_0 Betaproteobacteria_gi_149152844-13322-51227 hallmark;refseq 48;20;9;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia Burkholderia pseudomallei 91 prophage linear Cluster_0 Betaproteobacteria_gi_149153429-10214-17473 noncaudo 11;4;2;5 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia Burkholderia pseudomallei 91 prophage linear Cluster_128 Betaproteobacteria_gi_149154255 hallmark;refseq 17;17;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia Burkholderia pseudomallei 91 extrachromosomal linear Cluster_0 Betaproteobacteria_gi_149154262-3977-49562 hallmark;refseq 66;36;1;29 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia Burkholderia pseudomallei 91 prophage linear Cluster_484 Betaproteobacteria_gi_149154927-0-36507 hallmark;refseq 49;21;11;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia Burkholderia pseudomallei 9 prophage linear Cluster_0 Betaproteobacteria_gi_149156612-0-7186 refseq 9;4;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia Burkholderia thailandensis MSMB43 prophage linear Cluster_128 Betaproteobacteria_gi_149156612-7236-15377 refseq 11;4;2;5 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia Burkholderia thailandensis MSMB43 prophage linear Cluster_128 Betaproteobacteria_gi_149156765-2958-43574 hallmark;refseq 52;44;2;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia Burkholderia thailandensis MSMB43 prophage linear Cluster_0 Betaproteobacteria_gi_149157060-14682-55543 hallmark;refseq 46;28;;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unclassified;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia Burkholderia thailandensis MSMB43 prophage linear Cluster_273 Betaproteobacteria_gi_149157104-9522-43061 hallmark;refseq 47;25;7;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia Burkholderia thailandensis MSMB43 prophage linear Cluster_39 Betaproteobacteria_gi_149158964 hallmark;refseq 75;27;19;29 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia Burkholderia pseudomallei 7894 extrachromosomal linear Cluster_0 Betaproteobacteria_gi_149160264 hallmark;refseq 22;19;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia Burkholderia pseudomallei 7894 extrachromosomal linear Cluster_0 Betaproteobacteria_gi_149160785-618-36269 hallmark;refseq 47;21;9;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia Burkholderia pseudomallei 112 prophage linear Cluster_0 Betaproteobacteria_gi_149161195 refseq 22;18;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia Burkholderia pseudomallei 112 extrachromosomal linear Cluster_0 Betaproteobacteria_gi_149161196 hallmark;refseq 28;23;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia Burkholderia pseudomallei 112 extrachromosomal linear Cluster_0 Betaproteobacteria_gi_149162466-10866-53097 hallmark;refseq 61;22;6;33 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia Burkholderia pseudomallei NCTC 13177 prophage linear Cluster_454 Betaproteobacteria_gi_152979768-2003821-2019674 hallmark;noncaudo 16;3;3;10 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Oxalobacteraceae;Janthinobacterium Janthinobacterium sp. Marseille prophage linear Cluster_14 Betaproteobacteria_gi_171316474-21791-47298 hallmark;refseq 35;33;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia Burkholderia ambifaria MEX-5 prophage linear Cluster_0 Betaproteobacteria_gi_171317890-6289-13945 noncaudo 9;4;3;2 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia Burkholderia ambifaria MEX-5 prophage linear Cluster_128 Betaproteobacteria_gi_187925958-648026-657093 hallmark;noncaudo 10;5;1;4 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Ralstonia Ralstonia pickettii 12J prophage linear Cluster_216 Betaproteobacteria_gi_187927112-1481834-1495435 hallmark;noncaudo 22;13;1;8 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Ralstonia Ralstonia pickettii 12J prophage linear Cluster_172 Betaproteobacteria_gi_187927112-2648175-2656505 hallmark;noncaudo 13;7;1;5 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Ralstonia Ralstonia pickettii 12J prophage linear Cluster_172 Betaproteobacteria_gi_191639869-573341-609615 hallmark;refseq 50;50;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia Burkholderia cenocepacia J2315 prophage linear Cluster_21 Betaproteobacteria_gi_206558403-100404-124893 hallmark;refseq 27;26;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia Burkholderia cenocepacia J2315 prophage linear Cluster_0 Betaproteobacteria_gi_207738414-1132627-1141966 hallmark;noncaudo 14;8;3;3 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Ralstonia Ralstonia solanacearum IPO1609 prophage linear Cluster_14 Betaproteobacteria_gi_207741818-2278619-2293606 hallmark;noncaudo 16;8;2;6 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Ralstonia Ralstonia solanacearum IPO1609 prophage linear Cluster_216 Betaproteobacteria_gi_223045381-3807-44257 hallmark;refseq 53;19;9;25 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria flavescens NRL30031/H210 prophage linear Cluster_4 Betaproteobacteria_gi_223958654-35-19653 hallmark;refseq;vdb 19;11;2;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria gonorrhoeae 1291 prophage linear Cluster_262 Betaproteobacteria_gi_223958736 hallmark 32;10;7;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Tunalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria gonorrhoeae DGI18 extrachromosomal linear Cluster_341 Betaproteobacteria_gi_223958788-22514-42929 hallmark;refseq 21;12;2;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria gonorrhoeae FA6140 prophage linear Cluster_262 Betaproteobacteria_gi_224824873-246380-282062 hallmark;refseq 47;28;7;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Pseudogulbenkiania Pseudogulbenkiania ferrooxidans 2002 prophage linear Cluster_39 Betaproteobacteria_gi_241661625-2269330-2280478 noncaudo 15;5;1;9 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Ralstonia Ralstonia pickettii 12D prophage linear Cluster_596 Betaproteobacteria_gi_241665037-1103420-1112387 noncaudo 13;7;;6 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Ralstonia Ralstonia pickettii 12D prophage linear Cluster_172 Betaproteobacteria_gi_241763567-0-44634 hallmark;refseq 62;20;1;41 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Comamonadaceae;Acidovorax Acidovorax delafieldii 2AN prophage linear Cluster_233 Betaproteobacteria_gi_241764055-7507-15116 noncaudo 13;5;;8 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Comamonadaceae;Acidovorax Acidovorax delafieldii 2AN prophage linear Cluster_14 Betaproteobacteria_gi_254028270 noncaudo 13;3;3;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Methylophilales;Methylophilaceae;Methylovorus Methylovorus glucosetrophus SIP3-4 extrachromosomal linear Cluster_172 Betaproteobacteria_gi_254173940-2210684-2246765 hallmark;refseq 45;44;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia Burkholderia thailandensis E264 prophage linear Cluster_0 Betaproteobacteria_gi_254192738-549538-570582 hallmark;refseq 29;29;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia Burkholderia pseudomallei S13 prophage linear Cluster_0 Betaproteobacteria_gi_254193268-0-11560 hallmark;refseq 10;9;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia Burkholderia pseudomallei S13 prophage linear Cluster_0 Betaproteobacteria_gi_254195679-253946-289935 hallmark;refseq 46;21;9;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia Burkholderia pseudomallei S13 prophage linear Cluster_0 Betaproteobacteria_gi_254197076-0-32884 hallmark;refseq 42;42;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia Burkholderia pseudomallei S13 prophage linear Cluster_0 Betaproteobacteria_gi_254199197 hallmark;refseq 32;15;9;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia Burkholderia pseudomallei S13 extrachromosomal linear Cluster_0 Betaproteobacteria_gi_258589883 hallmark;refseq 28;18;1;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria lactamica ATCC 23970 extrachromosomal linear Cluster_54 Betaproteobacteria_gi_260590258-28330-68074 hallmark;refseq 54;22;12;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria subflava NJ9703 prophage linear Cluster_39 Betaproteobacteria_gi_293398769 hallmark 41;13;7;21 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Tunalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria gonorrhoeae F62 extrachromosomal linear Cluster_341 Betaproteobacteria_gi_296042073 hallmark 33;11;6;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria polysaccharea ATCC 43768 extrachromosomal linear Cluster_187 Betaproteobacteria_gi_299534258 hallmark 35;12;4;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unclassified;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Comamonadaceae;Comamonas Comamonas testosteroni S44 extrachromosomal linear Cluster_379 Betaproteobacteria_gi_300702374-1748600-1785174 hallmark;refseq 54;41;5;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Ralstonia Ralstonia solanacearum CFBP2957 prophage linear Cluster_21 Betaproteobacteria_gi_300702374-1860361-1868042 hallmark;noncaudo 12;9;;3 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Ralstonia Ralstonia solanacearum CFBP2957 prophage linear Cluster_172 Betaproteobacteria_gi_309783526-6715-15824 noncaudo 13;6;2;5 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Ralstonia Ralstonia sp. 5_7_47FAA prophage linear Cluster_543 Betaproteobacteria_gi_332283175 hallmark;refseq 68;24;5;39 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Alcaligenaceae;Pusillimonas Pusillimonas sp. T7-7 extrachromosomal linear Cluster_180 Betaproteobacteria_gi_333911667-4419908-4429086 hallmark;noncaudo 12;5;;7 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Comamonadaceae;Delftia Delftia sp. Cs1-4 prophage linear Cluster_14 Betaproteobacteria_gi_33598993-3833573-3869403 hallmark;refseq 48;29;8;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Alcaligenaceae;Bordetella Bordetella bronchiseptica RB50 prophage linear Cluster_39 Betaproteobacteria_gi_338760576-20718-62259 hallmark 56;15;9;32 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria sicca 4320 prophage linear Cluster_341 Betaproteobacteria_gi_339905954-1891604-1929514 hallmark;refseq 47;41;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia Burkholderia glumae BGR1 prophage linear Cluster_0 Betaproteobacteria_gi_340785197-2493510-2511229 noncaudo 28;7;2;19 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Oxalobacteraceae;Collimonas Collimonas fungivorans Ter331 prophage linear Cluster_172 Betaproteobacteria_gi_340785197-3916048-3955290 hallmark;refseq 47;23;8;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Oxalobacteraceae;Collimonas Collimonas fungivorans Ter331 prophage linear Cluster_93 Betaproteobacteria_gi_34495455-428968-449964 hallmark;refseq;vdb 23;17;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Chromobacterium Chromobacterium violaceum ATCC 12472 prophage linear Cluster_22 Betaproteobacteria_gi_345874541 hallmark;refseq 58;32;9;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria weaveri LMG 5135 extrachromosomal linear Cluster_21 Betaproteobacteria_gi_347537839-960551-1005744 hallmark;refseq 63;26;5;32 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Pseudogulbenkiania Pseudogulbenkiania sp. NH8B prophage linear Cluster_1 Betaproteobacteria_gi_348618597 hallmark;refseq 53;17;8;28 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Candidatus Glomeribacter Candidatus Glomeribacter gigasporarum BEG34 extrachromosomal linear Cluster_351 Betaproteobacteria_gi_348618666 refseq 23;10;2;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Candidatus Glomeribacter Candidatus Glomeribacter gigasporarum BEG34 extrachromosomal linear Cluster_203 Betaproteobacteria_gi_353025679 refseq 15;8;3;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Spounalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia Candidatus Burkholderia kirkii UZHbot1 extrachromosomal linear Cluster_19 Betaproteobacteria_gi_374365821-94473-100136 hallmark;noncaudo 10;5;1;4 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Cupriavidus Cupriavidus basilensis OR16 prophage linear Cluster_229 Betaproteobacteria_gi_374370123-21701-58664 hallmark;refseq 57;26;6;25 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Cupriavidus Cupriavidus basilensis OR16 prophage linear Cluster_39 Betaproteobacteria_gi_374370688-23026-35095 noncaudo 17;6;;11 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Cupriavidus Cupriavidus basilensis OR16 prophage linear Cluster_216 Betaproteobacteria_gi_381402495-554374-590902 hallmark;refseq 47;27;7;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Kingella Kingella kingae PYKK081 prophage linear Cluster_44 Betaproteobacteria_gi_386860126-133514-172629 hallmark;refseq 51;48;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia Burkholderia pseudomallei 1026b prophage linear Cluster_0 Betaproteobacteria_gi_388567966 refseq 55;19;14;22 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Comamonadaceae;Hydrogenophaga Hydrogenophaga sp. PBC extrachromosomal linear Cluster_168 Betaproteobacteria_gi_388568376-13575-50310 hallmark;refseq;vdb 48;19;9;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Comamonadaceae;Hydrogenophaga Hydrogenophaga sp. PBC prophage linear Cluster_168 Betaproteobacteria_gi_395009488-0-32631 hallmark 39;12;7;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Comamonadaceae;Acidovorax Acidovorax sp. CF316 prophage linear Cluster_20 Betaproteobacteria_gi_398833554 hallmark 32;7;2;23 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Oxalobacteraceae;Herbaspirillum Herbaspirillum sp. YR522 extrachromosomal linear Cluster_351 Betaproteobacteria_gi_399020337-0-8906 noncaudo 16;3;1;12 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Oxalobacteraceae;Herbaspirillum Herbaspirillum sp. CF444 prophage linear Cluster_51 Betaproteobacteria_gi_405795793-132377-141470 noncaudo 13;6;1;6 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Ralstonia Ralstonia sp. 5_2_56FAA prophage linear Cluster_543 Betaproteobacteria_gi_416161686 hallmark;refseq 28;18;6;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis N1568 extrachromosomal linear Cluster_44 Betaproteobacteria_gi_416170988 hallmark;refseq 23;13;8;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis OX99.30304 extrachromosomal linear Cluster_44 Betaproteobacteria_gi_416182996-9218-35501 hallmark;refseq 29;18;6;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis M13399 prophage linear Cluster_44 Betaproteobacteria_gi_416196569 hallmark;refseq 52;20;18;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis CU385 extrachromosomal linear Cluster_44 Betaproteobacteria_gi_416205302-17734-46738 hallmark 38;11;10;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis 961-5945 prophage linear Cluster_75 Betaproteobacteria_gi_418288327 hallmark;refseq 25;18;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis NM233 extrachromosomal linear Cluster_44 Betaproteobacteria_gi_418290553 hallmark;refseq 25;18;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis NM220 extrachromosomal linear Cluster_44 Betaproteobacteria_gi_418397746 refseq 11;6;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia Burkholderia pseudomallei 354a extrachromosomal linear Cluster_463 Betaproteobacteria_gi_418397949 hallmark;refseq 14;7;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia Burkholderia pseudomallei 354a extrachromosomal linear Cluster_0 Betaproteobacteria_gi_418544760-35653-70831 hallmark;refseq 46;19;9;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia Burkholderia pseudomallei 1258a prophage linear Cluster_0 Betaproteobacteria_gi_418551753-35655-70833 hallmark;refseq 46;19;9;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia Burkholderia pseudomallei 1258b prophage linear Cluster_0 Betaproteobacteria_gi_418558068 refseq 12;6;1;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia Burkholderia pseudomallei 354e extrachromosomal linear Cluster_463 Betaproteobacteria_gi_421470373-6597-38546 hallmark;refseq 43;37;1;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia Burkholderia multivorans ATCC BAA-247 prophage linear Cluster_0 Betaproteobacteria_gi_421483435 hallmark 25;7;2;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Alcaligenaceae;Achromobacter Achromobacter piechaudii HLE extrachromosomal linear Cluster_294 Betaproteobacteria_gi_421485108 hallmark;refseq 23;10;1;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Alcaligenaceae;Achromobacter Achromobacter piechaudii HLE extrachromosomal linear Cluster_126 Betaproteobacteria_gi_421486561 hallmark 18;8;6;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Alcaligenaceae;Achromobacter Achromobacter piechaudii HLE extrachromosomal linear Cluster_4 Betaproteobacteria_gi_421540251 refseq 20;7;3;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis 93004 extrachromosomal linear Cluster_19 Betaproteobacteria_gi_421551205-22578-49209 hallmark;refseq 35;15;10;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis 69166 prophage linear Cluster_39 Betaproteobacteria_gi_421559037-310-25307 hallmark;refseq 32;21;6;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis 92045 prophage linear Cluster_44 Betaproteobacteria_gi_421565330 hallmark 17;4;5;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis NM3081 extrachromosomal linear Cluster_187 Betaproteobacteria_gi_421565348-0-17789 hallmark;refseq 24;17;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis NM3081 prophage linear Cluster_44 Betaproteobacteria_gi_421866684-29854-52313 hallmark;refseq 25;25;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia Burkholderia cenocepacia H111 prophage linear Cluster_0 Betaproteobacteria_gi_421887956 hallmark;refseq 28;23;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Ralstonia Ralstonia solanacearum K60-1 extrachromosomal linear Cluster_0 Betaproteobacteria_gi_421889794 hallmark;vdb 21;3;9;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Ralstonia Ralstonia solanacearum K60-1 extrachromosomal linear Cluster_168 Betaproteobacteria_gi_421906670-10852-49676 hallmark 49;15;14;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis alpha704 prophage linear Cluster_75 Betaproteobacteria_gi_421907146-25772-63784 hallmark;refseq 56;25;6;25 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis alpha704 prophage linear Cluster_0 Betaproteobacteria_gi_424777143-20292-28139 noncaudo 14;4;;10 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Alcaligenaceae;Alcaligenes Alcaligenes sp. HPC1271 prophage linear Cluster_51 Betaproteobacteria_gi_424777481 hallmark;refseq 85;33;20;32 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Alcaligenaceae;Alcaligenes Alcaligenes sp. HPC1271 extrachromosomal linear Cluster_4 Betaproteobacteria_gi_424778001 refseq 37;15;8;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Alcaligenaceae;Alcaligenes Alcaligenes sp. HPC1271 extrachromosomal linear Cluster_4 Betaproteobacteria_gi_427827172 hallmark;refseq 19;13;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis H44/76 extrachromosomal linear Cluster_44 Betaproteobacteria_gi_430025423-31365-38532 noncaudo 11;4;;7 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Cupriavidus Cupriavidus sp. HMR-1 prophage linear Cluster_596 Betaproteobacteria_gi_430025539-0-9822 hallmark;refseq 10;2;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;T4likevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Cupriavidus Cupriavidus sp. HMR-1 prophage linear unclustered Betaproteobacteria_gi_430025539-9934-18290 hallmark;refseq 13;8;;5 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Cupriavidus Cupriavidus sp. HMR-1 prophage linear Cluster_229 Betaproteobacteria_gi_433469085 hallmark 63;17;20;26 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis 98080 extrachromosomal linear Cluster_75 Betaproteobacteria_gi_433471878-16696-43917 hallmark;refseq 40;15;10;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis 68094 prophage linear Cluster_39 Betaproteobacteria_gi_433475550-69948-90645 hallmark 35;12;5;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis 88050 prophage linear Cluster_348 Betaproteobacteria_gi_433478052-19813-59877 hallmark;refseq 65;22;13;30 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis 70012 prophage linear Cluster_39 Betaproteobacteria_gi_433486252 hallmark 26;6;6;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis 97014 extrachromosomal linear Cluster_348 Betaproteobacteria_gi_433486278-1344-17199 hallmark;refseq;vdb 20;14;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis 97014 prophage linear Cluster_44 Betaproteobacteria_gi_433520303 hallmark;refseq 44;15;14;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis 65014 extrachromosomal linear Cluster_39 Betaproteobacteria_gi_433539367-23823-51958 hallmark;refseq 41;15;11;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis 70030 prophage linear Cluster_39 Betaproteobacteria_gi_444348149 hallmark;refseq 19;11;;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria sp. oral taxon 020 str. F0370 extrachromosomal linear Cluster_21 Betaproteobacteria_gi_444348953 hallmark;refseq 41;18;7;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria sp. oral taxon 020 str. F0370 extrachromosomal linear Cluster_21 Betaproteobacteria_gi_482909684-27294-76934 hallmark;refseq 62;45;5;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia Burkholderia pyrrocinia CH-67 prophage linear Cluster_4 Betaproteobacteria_gi_482910708-110400-140622 hallmark;refseq 32;30;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia Burkholderia pyrrocinia CH-67 prophage linear Cluster_0 Betaproteobacteria_gi_483224433 hallmark 28;9;4;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Gallionellales;Gallionellaceae;Gallionella Gallionella sp. SCGC AAA018-N21 extrachromosomal linear Cluster_359 Betaproteobacteria_gi_483587362-3686-53282 hallmark;refseq 73;25;15;33 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia Burkholderia glumae AU6208 prophage linear Cluster_28 Betaproteobacteria_gi_483606617 refseq 16;7;2;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia Burkholderia glumae AU6208 extrachromosomal linear Cluster_1 Betaproteobacteria_gi_483800879-58739-68696 noncaudo;vdb 13;4;1;8 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia Burkholderia sp. WSM4176 prophage linear Cluster_51 Betaproteobacteria_gi_483967339 noncaudo;vdb 13;3;4;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Betaproteobacteria;Hydrogenophilales;Hydrogenophilaceae;Thiobacillus Thiobacillus thioparus DSM 505 extrachromosomal circular Cluster_51 Betaproteobacteria_gi_484009608-6961-46444 hallmark;refseq;vdb 55;27;11;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Comamonadaceae;Brachymonas Brachymonas chironomi DSM 19884 prophage linear Cluster_21 Betaproteobacteria_gi_484077491-142197-183464 hallmark;refseq 52;22;2;28 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Betaproteobacteria;Rhodocyclales;Rhodocyclaceae;Azoarcus Azoarcus toluclasticus ATCC 700605 prophage linear Cluster_249 Betaproteobacteria_gi_484145774 hallmark;refseq 46;19;9;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia Burkholderia pseudomallei NCTC 13392 extrachromosomal linear Cluster_0 Betaproteobacteria_gi_484145809 hallmark;refseq 32;20;1;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia Burkholderia pseudomallei NCTC 13392 extrachromosomal linear Cluster_4 Betaproteobacteria_gi_484145824 refseq 36;18;;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia Burkholderia pseudomallei NCTC 13392 extrachromosomal linear Cluster_484 Betaproteobacteria_gi_484173433 hallmark;refseq 11;6;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Comamonadaceae;Comamonas Comamonas testosteroni NBRC 100989 extrachromosomal linear Cluster_0 Betaproteobacteria_gi_484173463-54273-68336 hallmark;refseq 18;13;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Comamonadaceae;Comamonas Comamonas testosteroni NBRC 100989 prophage linear Cluster_0 Betaproteobacteria_gi_484322655-389-42258 hallmark 56;15;15;26 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis NMB prophage linear Cluster_75 Betaproteobacteria_gi_485035252-3325-16821 noncaudo 17;4;1;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia Burkholderia thailandensis E555 prophage linear unclustered Betaproteobacteria_gi_485035271-0-47405 hallmark;refseq 59;53;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia Burkholderia thailandensis E555 prophage linear Cluster_4 Betaproteobacteria_gi_485035303 hallmark;refseq 21;10;4;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia Burkholderia thailandensis E555 extrachromosomal linear Cluster_21 Betaproteobacteria_gi_485035531 hallmark;refseq 24;20;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia Burkholderia thailandensis E555 extrachromosomal linear Cluster_0 Betaproteobacteria_gi_485042487 hallmark;refseq 27;21;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria lactamica NS19 extrachromosomal linear Cluster_54 Betaproteobacteria_gi_485042531-0-35368 hallmark;refseq 56;20;12;24 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria lactamica NS19 prophage linear Cluster_39 Betaproteobacteria_gi_485043027 hallmark;refseq 22;16;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis NS44 extrachromosomal linear Cluster_44 Betaproteobacteria_gi_485049118-24003-65731 hallmark;refseq;vdb 56;27;11;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Kingella Kingella kingae 11220434 prophage linear Cluster_44 Betaproteobacteria_gi_485071427 hallmark;refseq;vdb 65;17;22;26 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Comamonadaceae;Caldimonas Caldimonas manganoxidans ATCC BAA-369 extrachromosomal linear Cluster_168 Betaproteobacteria_gi_485071434 hallmark;refseq 57;20;15;22 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Comamonadaceae;Caldimonas Caldimonas manganoxidans ATCC BAA-369 extrachromosomal linear Cluster_22 Betaproteobacteria_gi_485071454 refseq 16;10;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Comamonadaceae;Caldimonas Caldimonas manganoxidans ATCC BAA-369 extrachromosomal linear Cluster_168 Betaproteobacteria_gi_485074404 hallmark 18;5;4;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Comamonadaceae;Curvibacter Curvibacter lanceolatus ATCC 14669 extrachromosomal linear Cluster_513 Betaproteobacteria_gi_485074414 hallmark 12;3;3;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Comamonadaceae;Curvibacter Curvibacter lanceolatus ATCC 14669 extrachromosomal linear Cluster_513 Betaproteobacteria_gi_485099580 hallmark 74;17;10;47 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Vitreoscilla Vitreoscilla stercoraria DSM 513 extrachromosomal linear Cluster_66 Betaproteobacteria_gi_485458316 hallmark;vdb 25;4;11;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Ralstonia Ralstonia solanacearum Y45 extrachromosomal linear Cluster_168 Betaproteobacteria_gi_485458331-0-36835 hallmark 53;15;11;27 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Ralstonia Ralstonia solanacearum Y45 prophage linear Cluster_351 Betaproteobacteria_gi_485458402-20704-33160 hallmark;refseq 16;12;;4 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Ralstonia Ralstonia solanacearum Y45 prophage linear Cluster_216 Betaproteobacteria_gi_485472159 hallmark;refseq 38;20;9;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis Nm8187 extrachromosomal linear Cluster_44 Betaproteobacteria_gi_487420637 hallmark;refseq 27;15;6;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis 69155 extrachromosomal linear Cluster_44 Betaproteobacteria_gi_487421359 hallmark;refseq 53;18;16;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis 69155 extrachromosomal linear Cluster_39 Betaproteobacteria_gi_487424174 hallmark;refseq 49;16;15;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis 69176 extrachromosomal linear Cluster_39 Betaproteobacteria_gi_487426108 hallmark;refseq 39;15;12;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis 70021 extrachromosomal linear Cluster_39 Betaproteobacteria_gi_487426389 hallmark;refseq 32;18;9;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis 70021 extrachromosomal linear Cluster_44 Betaproteobacteria_gi_487429924 hallmark;refseq 47;15;15;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis 2000080 extrachromosomal linear Cluster_39 Betaproteobacteria_gi_487432665 hallmark;refseq 42;15;13;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis 96060 extrachromosomal linear Cluster_39 Betaproteobacteria_gi_487435052 hallmark;refseq 43;14;13;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis 94018 extrachromosomal linear Cluster_39 Betaproteobacteria_gi_487437034 hallmark;refseq 19;11;1;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis 75643 extrachromosomal linear Cluster_44 Betaproteobacteria_gi_487437603 hallmark;refseq 47;16;15;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis 75643 extrachromosomal linear Cluster_39 Betaproteobacteria_gi_487440460-7622-34035 hallmark;refseq 33;14;10;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis 75689 prophage linear Cluster_39 Betaproteobacteria_gi_487445784 hallmark;refseq 32;18;9;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis 63023 extrachromosomal linear Cluster_44 Betaproteobacteria_gi_487446621 hallmark;refseq 42;15;13;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis 63023 extrachromosomal linear Cluster_39 Betaproteobacteria_gi_487449474 hallmark;refseq 53;17;15;21 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis 61106 extrachromosomal linear Cluster_39 Betaproteobacteria_gi_487451601 hallmark;refseq 27;15;7;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis 70082 extrachromosomal linear Cluster_44 Betaproteobacteria_gi_487452158 hallmark;refseq 47;16;16;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis 70082 extrachromosomal linear Cluster_39 Betaproteobacteria_gi_487454199 hallmark;refseq 29;13;9;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis 65012 extrachromosomal linear Cluster_39 Betaproteobacteria_gi_487455050 hallmark;refseq 41;14;13;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis 65012 extrachromosomal linear Cluster_39 Betaproteobacteria_gi_487457185 hallmark;refseq 32;14;12;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis 64182 extrachromosomal linear Cluster_44 Betaproteobacteria_gi_487457893 hallmark;refseq 42;14;13;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis 64182 extrachromosomal linear Cluster_39 Betaproteobacteria_gi_487461073 hallmark;refseq 48;16;13;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis 97027 extrachromosomal linear Cluster_39 Betaproteobacteria_gi_487463704 hallmark;refseq 43;14;13;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis 96024 extrachromosomal linear Cluster_39 Betaproteobacteria_gi_487465903 hallmark;refseq 19;11;2;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis 97008 extrachromosomal linear Cluster_44 Betaproteobacteria_gi_487466538 hallmark;refseq 47;15;15;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis 97008 extrachromosomal linear Cluster_39 Betaproteobacteria_gi_487469511-8012-35389 hallmark;refseq 39;14;10;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis 98005 prophage linear Cluster_39 Betaproteobacteria_gi_487472849-6782-34925 hallmark;refseq 40;14;11;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis 2004085 prophage linear Cluster_39 Betaproteobacteria_gi_487475693 hallmark;refseq 19;11;2;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis 2000063 extrachromosomal linear Cluster_44 Betaproteobacteria_gi_487476374-8017-35358 hallmark;refseq 39;14;10;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis 2000063 prophage linear Cluster_39 Betaproteobacteria_gi_487478854 hallmark;refseq 15;9;1;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis 2002007 extrachromosomal linear Cluster_44 Betaproteobacteria_gi_487479565-7933-35265 hallmark;refseq 39;14;10;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis 2002007 prophage linear Cluster_39 Betaproteobacteria_gi_487482935 hallmark;refseq 43;14;13;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis NM604 extrachromosomal linear Cluster_39 Betaproteobacteria_gi_487485259 hallmark;refseq 19;11;2;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis NM606 extrachromosomal linear Cluster_44 Betaproteobacteria_gi_487485894 hallmark;refseq 42;14;13;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis NM606 extrachromosomal linear Cluster_39 Betaproteobacteria_gi_487488021 hallmark;refseq 18;11;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis NM607 extrachromosomal linear Cluster_44 Betaproteobacteria_gi_487488869 hallmark;refseq 42;14;13;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis NM607 extrachromosomal linear Cluster_39 Betaproteobacteria_gi_487491298-8795-34263 hallmark;vdb 32;10;9;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis NM133 prophage linear Cluster_75 Betaproteobacteria_gi_487495181 hallmark 68;21;22;25 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis NM23 extrachromosomal linear Cluster_75 Betaproteobacteria_gi_487498307 hallmark 53;17;18;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis NM32 extrachromosomal linear Cluster_75 Betaproteobacteria_gi_487501362 hallmark;vdb 39;12;12;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis NM35 extrachromosomal linear Cluster_75 Betaproteobacteria_gi_487503635-420-37399 hallmark;vdb 44;11;16;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis NM36 prophage linear Cluster_75 Betaproteobacteria_gi_487507773-8580-34269 hallmark 32;9;9;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis NM43 prophage linear Cluster_75 Betaproteobacteria_gi_487510450 hallmark;vdb 39;13;12;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis NM82 extrachromosomal linear Cluster_75 Betaproteobacteria_gi_487513012-8585-34058 hallmark;vdb 31;9;9;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis NM94 prophage linear Cluster_75 Betaproteobacteria_gi_487515800 hallmark;vdb 39;12;12;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis NM95 extrachromosomal linear Cluster_75 Betaproteobacteria_gi_487518814 hallmark;vdb 39;12;12;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis NM313 extrachromosomal linear Cluster_75 Betaproteobacteria_gi_487521614 hallmark;vdb 38;12;12;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis NM1495 extrachromosomal linear Cluster_75 Betaproteobacteria_gi_487527942-7986-36990 hallmark 38;11;10;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis 73704 prophage linear Cluster_75 Betaproteobacteria_gi_487534473 hallmark 19;4;5;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis 2002020 extrachromosomal linear Cluster_187 Betaproteobacteria_gi_487534494 hallmark;refseq 19;13;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis 2002020 extrachromosomal linear Cluster_44 Betaproteobacteria_gi_487537359 hallmark 19;4;5;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis NM477 extrachromosomal linear Cluster_187 Betaproteobacteria_gi_487537383-1219-12163 hallmark;refseq;vdb 14;12;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis NM477 prophage linear Cluster_44 Betaproteobacteria_gi_487539860 hallmark 19;4;5;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis M13265 extrachromosomal linear Cluster_187 Betaproteobacteria_gi_487539883-1244-12188 hallmark;refseq;vdb 14;12;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis M13265 prophage linear Cluster_44 Betaproteobacteria_gi_487542268 hallmark 47;15;12;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis NM3147 extrachromosomal linear Cluster_75 Betaproteobacteria_gi_487544895 hallmark 48;15;14;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis 2001072 extrachromosomal linear Cluster_75 Betaproteobacteria_gi_487547563 hallmark;vdb 40;12;13;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis 2001073 extrachromosomal linear Cluster_75 Betaproteobacteria_gi_487550129 hallmark;vdb 38;12;12;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis 2000081 extrachromosomal linear Cluster_75 Betaproteobacteria_gi_487556222-2277-25484 hallmark;refseq 26;17;5;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis 2004032 prophage linear Cluster_44 Betaproteobacteria_gi_487562486 hallmark 43;14;11;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis 2004264 extrachromosomal linear Cluster_75 Betaproteobacteria_gi_487565741 hallmark 58;18;21;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis 2000175 extrachromosomal linear Cluster_75 Betaproteobacteria_gi_487570048-0-26664 hallmark;vdb 33;10;9;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis 2005079 prophage linear Cluster_75 Betaproteobacteria_gi_487572903 hallmark 49;15;15;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis 2005040 extrachromosomal linear Cluster_75 Betaproteobacteria_gi_487576318 hallmark 49;15;14;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis 2002004 extrachromosomal linear Cluster_75 Betaproteobacteria_gi_487579623 hallmark 24;4;6;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis 2005172 extrachromosomal linear Cluster_348 Betaproteobacteria_gi_487579655-1469-17324 hallmark;refseq;vdb 20;14;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis 2005172 prophage linear Cluster_44 Betaproteobacteria_gi_487583237 hallmark 24;4;6;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis 2008223 extrachromosomal linear Cluster_348 Betaproteobacteria_gi_487583270-1481-17336 hallmark;refseq;vdb 20;14;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis 2008223 prophage linear Cluster_44 Betaproteobacteria_gi_487586717-2752-25386 hallmark;refseq 25;17;5;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis 2003051 prophage linear Cluster_44 Betaproteobacteria_gi_487599140-3096-25709 hallmark;refseq 26;18;5;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis NM90 prophage linear Cluster_44 Betaproteobacteria_gi_487628299-8383-31481 hallmark;refseq 28;18;5;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis NM165 prophage linear Cluster_44 Betaproteobacteria_gi_489033261 hallmark 58;16;5;37 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Betaproteobacteria;Rhodocyclales;Rhodocyclaceae;Thauera Thauera sp. 27 extrachromosomal linear Cluster_1 Betaproteobacteria_gi_490282712-321-30149 hallmark 35;10;2;23 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Betaproteobacteria;Nitrosomonadales;Nitrosomonadaceae;Nitrosospira Nitrosospira sp. APG3 prophage linear Cluster_5 Betaproteobacteria_gi_490469351-14437-21721 noncaudo;vdb 13;2;1;10 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Rhodocyclales;Rhodocyclaceae;Thauera Thauera linaloolentis 47Lol = DSM 12138 prophage linear Cluster_228 Betaproteobacteria_gi_490490454 hallmark;refseq 59;23;10;26 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Betaproteobacteria;Rhodocyclales;Rhodocyclaceae;Thauera Thauera phenylacetica B4P extrachromosomal linear Cluster_21 Betaproteobacteria_gi_490769071-294376-302519 noncaudo 11;7;1;3 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Ralstonia Ralstonia pickettii OR214 prophage linear Cluster_172 Betaproteobacteria_gi_498489424 hallmark;refseq 18;11;2;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis 97018 extrachromosomal linear Cluster_44 Betaproteobacteria_gi_498489471-7531-34882 hallmark;refseq 39;14;10;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis 97018 prophage linear Cluster_39 Betaproteobacteria_gi_498489675 hallmark;refseq 46;15;15;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis 2003022 extrachromosomal linear Cluster_39 Betaproteobacteria_gi_498489846 hallmark 47;14;15;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis NM1482 extrachromosomal linear Cluster_75 Betaproteobacteria_gi_498490106-5337-27950 hallmark;refseq 26;18;5;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis NM27 prophage linear Cluster_44 Betaproteobacteria_gi_505733775-245011-254189 noncaudo 12;4;2;6 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Pandoraea Pandoraea sp. SD6-2 prophage linear Cluster_51 Betaproteobacteria_gi_511621714 hallmark;refseq 36;23;;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Comamonadaceae;Comamonas Comamonas sp. B-9 extrachromosomal linear Cluster_0 Betaproteobacteria_gi_512572917 hallmark;refseq 92;27;4;61 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Comamonadaceae;Delftia Delftia acidovorans CCUG 274B extrachromosomal linear Cluster_233 Betaproteobacteria_gi_512574463 hallmark;refseq 21;10;1;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Comamonadaceae;Delftia Delftia acidovorans CCUG 274B extrachromosomal linear Cluster_0 Betaproteobacteria_gi_512600403 hallmark;refseq 83;25;16;42 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Comamonadaceae;Delftia Delftia acidovorans CCUG 15835 extrachromosomal linear Cluster_18 Betaproteobacteria_gi_512601249 hallmark 63;16;7;40 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Comamonadaceae;Delftia Delftia acidovorans CCUG 15835 extrachromosomal linear Cluster_180 Betaproteobacteria_gi_512605790 hallmark;refseq 22;9;3;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Comamonadaceae;Delftia Delftia acidovorans CCUG 15835 extrachromosomal linear Cluster_233 Betaproteobacteria_gi_514982514 refseq 16;7;6;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis 98002 extrachromosomal linear Cluster_4 Betaproteobacteria_gi_514982536-1469-17324 hallmark;refseq;vdb 20;14;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis 98002 prophage linear Cluster_44 Betaproteobacteria_gi_514983101-2256-25502 hallmark;refseq 26;17;5;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis 2007461 prophage linear Cluster_44 Betaproteobacteria_gi_514983307 hallmark 49;15;15;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis 2001068 extrachromosomal linear Cluster_75 Betaproteobacteria_gi_523408232-1103953-1118061 hallmark;noncaudo 17;7;3;7 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Ralstonia Ralstonia solanacearum CMR15 prophage linear Cluster_216 Betaproteobacteria_gi_526456747-1067646-1076055 noncaudo 10;6;2;2 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia Burkholderia pseudomallei MSHR305 prophage linear Cluster_128 Betaproteobacteria_gi_53717639-3967707-3975962 noncaudo 10;4;2;4 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia Burkholderia pseudomallei K96243 prophage linear Cluster_128 Betaproteobacteria_gi_53721039-1426445-1462145 hallmark;refseq 44;44;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia Burkholderia pseudomallei K96243 prophage linear Cluster_0 Betaproteobacteria_gi_537732135-122483-146963 hallmark;refseq 26;25;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia Burkholderia cenocepacia K56-2Valvano prophage linear Cluster_0 Betaproteobacteria_gi_543951000-15930-29749 hallmark;refseq 17;17;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia Burkholderia cenocepacia BC7 prophage linear Cluster_0 Betaproteobacteria_gi_543952876 hallmark;refseq 12;9;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia Burkholderia cenocepacia BC7 extrachromosomal linear Cluster_0 Betaproteobacteria_gi_544725867-309-9141 hallmark;refseq 17;13;;4 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Ralstonia Ralstonia solanacearum SD54 prophage linear Cluster_172 Betaproteobacteria_gi_544726344 hallmark 14;3;3;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Ralstonia Ralstonia solanacearum SD54 extrachromosomal linear Cluster_168 Betaproteobacteria_gi_545064648 hallmark;refseq 24;10;6;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis 96037 extrachromosomal linear Cluster_39 Betaproteobacteria_gi_545065055-1163-12107 hallmark;refseq;vdb 14;12;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis 2002030 prophage linear Cluster_44 Betaproteobacteria_gi_545065342 hallmark 19;5;5;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis NM3141 extrachromosomal linear Cluster_187 Betaproteobacteria_gi_545065345-1216-12160 hallmark;refseq;vdb 14;12;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis NM3141 prophage linear Cluster_44 Betaproteobacteria_gi_545066495 hallmark;refseq 24;11;6;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis NM151 extrachromosomal linear Cluster_39 Betaproteobacteria_gi_545067072-3524-10410 refseq 11;5;;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis NM1476 prophage linear Cluster_187 Betaproteobacteria_gi_545067074 hallmark 19;5;5;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis NM1476 extrachromosomal linear Cluster_187 Betaproteobacteria_gi_545067080-1185-12129 hallmark;refseq;vdb 14;12;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis NM1476 prophage linear Cluster_44 Betaproteobacteria_gi_545067796 hallmark;refseq 24;11;6;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis NM518 extrachromosomal linear Cluster_39 Betaproteobacteria_gi_545068093 hallmark 19;5;5;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis NM3173 extrachromosomal linear Cluster_187 Betaproteobacteria_gi_545068096 hallmark;refseq 20;13;3;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis NM3173 extrachromosomal linear Cluster_44 Betaproteobacteria_gi_545068290 hallmark;refseq 17;9;4;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis NM3230 extrachromosomal linear Cluster_262 Betaproteobacteria_gi_545068446 hallmark;refseq 22;10;1;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unclassified;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis NM3230 extrachromosomal linear Cluster_262 Betaproteobacteria_gi_545068473 hallmark;refseq 24;11;7;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis NM3230 extrachromosomal linear Cluster_39 Betaproteobacteria_gi_545068561 hallmark;refseq 20;11;2;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis NM3230 extrachromosomal linear Cluster_0 Betaproteobacteria_gi_545068801 hallmark;refseq 24;10;6;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria meningitidis NM2866 extrachromosomal linear Cluster_39 Betaproteobacteria_gi_545112286-22915-46656 hallmark;refseq;vdb 24;14;5;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Pseudogulbenkiania Pseudogulbenkiania ferrooxidans EGD-HP2 prophage linear Cluster_44 Betaproteobacteria_gi_545113632-26959-50050 hallmark;refseq 38;17;8;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Pseudogulbenkiania Pseudogulbenkiania ferrooxidans EGD-HP2 prophage linear Cluster_3 Betaproteobacteria_gi_545113834 hallmark;refseq 39;22;5;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Pseudogulbenkiania Pseudogulbenkiania ferrooxidans EGD-HP2 extrachromosomal linear Cluster_22 Betaproteobacteria_gi_545115158 hallmark;refseq 17;13;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Pseudogulbenkiania Pseudogulbenkiania ferrooxidans EGD-HP2 extrachromosomal linear Cluster_39 Betaproteobacteria_gi_546470327 hallmark;refseq 26;11;1;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Sutterellaceae;Parasutterella Parasutterella excrementihominis CAG:233 extrachromosomal linear Cluster_7 Betaproteobacteria_gi_548223806 hallmark 21;7;3;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Sutterellaceae;Sutterella Sutterella sp. CAG:351 extrachromosomal linear Cluster_248 Betaproteobacteria_gi_548224430 hallmark;refseq 28;13;7;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Sutterellaceae;Sutterella Sutterella sp. CAG:351 extrachromosomal linear Cluster_3 Betaproteobacteria_gi_551716217-1374427-1403994 hallmark;refseq 40;28;5;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Oxalobacteraceae;Oxalobacter Oxalobacter formigenes HOxBLS prophage linear Cluster_0 Betaproteobacteria_gi_551716217-1404222-1443175 hallmark;refseq 53;34;3;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Oxalobacteraceae;Oxalobacter Oxalobacter formigenes HOxBLS prophage linear Cluster_54 Betaproteobacteria_gi_553047139 hallmark;refseq 32;13;10;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria Neisseria gonorrhoeae FA19 extrachromosomal linear Cluster_262 Betaproteobacteria_gi_557849004 hallmark;refseq 9;7;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Ralstonia Ralstonia solanacearum SD54 extrachromosomal linear Cluster_210 Betaproteobacteria_gi_557849018-309-9141 hallmark;refseq 17;13;;4 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Ralstonia Ralstonia solanacearum SD54 prophage linear Cluster_172 Betaproteobacteria_gi_558010976-0-34852 hallmark;refseq 44;21;9;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia Burkholderia cenocepacia KC-01 prophage linear Cluster_0 Betaproteobacteria_gi_558013854-21777-34017 noncaudo 14;4;1;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia Burkholderia cenocepacia KC-01 prophage linear Cluster_51 Betaproteobacteria_gi_558016758 hallmark;refseq 54;39;6;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia Burkholderia cenocepacia KC-01 extrachromosomal circular Cluster_4 Betaproteobacteria_gi_564612022 hallmark 15;6;3;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Alcaligenaceae;Bordetella Bordetella pertussis CHLA-11 extrachromosomal linear Cluster_183 Betaproteobacteria_gi_565117443 hallmark;refseq 23;11;7;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Betaproteobacteria;Neisseriales;Neisseriaceae;Eikenella Eikenella corrodens CC92I extrachromosomal linear Cluster_21 Betaproteobacteria_gi_565867306 hallmark;refseq 53;28;9;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Alcaligenaceae;Pelistega Pelistega sp. HM-7 extrachromosomal linear Cluster_288 Betaproteobacteria_gi_565867615 hallmark;vdb 13;1;2;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Alcaligenaceae;Pelistega Pelistega sp. HM-7 extrachromosomal linear unclustered Betaproteobacteria_gi_565867765 hallmark 38;10;4;24 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Alcaligenaceae;Pelistega Pelistega sp. HM-7 extrachromosomal linear Cluster_553 Betaproteobacteria_gi_565871297 hallmark 24;4;1;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Alcaligenaceae;Pelistega Pelistega sp. HM-7 extrachromosomal linear Cluster_553 Betaproteobacteria_gi_566076436 hallmark;vdb 56;16;23;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Alcaligenaceae;Bordetella Bordetella pertussis STO1-CHOC-0019 extrachromosomal linear Cluster_183 Betaproteobacteria_gi_566083461 hallmark 15;6;3;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Alcaligenaceae;Bordetella Bordetella pertussis CHLA-13 extrachromosomal linear Cluster_183 Betaproteobacteria_gi_566102480-20-12589 hallmark 20;9;6;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Alcaligenaceae;Bordetella Bordetella pertussis 2371640 prophage linear Cluster_183 Betaproteobacteria_gi_566102480-21201-33479 hallmark 16;6;2;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Alcaligenaceae;Bordetella Bordetella pertussis 2371640 prophage linear Cluster_183 Betaproteobacteria_gi_566110776 hallmark;refseq 13;6;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Alcaligenaceae;Bordetella Bordetella pertussis 2356847 extrachromosomal linear Cluster_183 Betaproteobacteria_gi_83716035-1578828-1614931 hallmark;refseq 45;44;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia Burkholderia thailandensis E264 prophage linear Cluster_0 Betaproteobacteria_gi_83718394-3724103-3732010 noncaudo 10;5;3;2 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia Burkholderia thailandensis E264 prophage linear Cluster_128 Betaproteobacteria_gi_83746828-73871-83566 hallmark;refseq 13;8;2;3 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Ralstonia Ralstonia solanacearum UW551 prophage linear Cluster_216 Betaproteobacteria_gi_83748706-38779-47373 hallmark;noncaudo 14;8;2;4 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Ralstonia Ralstonia solanacearum UW551 prophage linear Cluster_14 Betaproteobacteria_gi_83749797 hallmark 13;3;3;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Ralstonia Ralstonia solanacearum UW551 extrachromosomal linear Cluster_18 Caldiserica_bacterium_sp_JGI_0000059-M03_ID_3731 hallmark;refseq 16;8;2;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Caldiserica;unknown;unknown;unknown;unknown Caldiserica_bacterium_sp_JGI_0000059-M03 extrachromosomal linear Cluster_22 Caldiserica_bacterium_sp_JGI_0000059-M03_ID_3757 noncaudo 12;3;2;7 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Caldiserica;unknown;unknown;unknown;unknown Caldiserica_bacterium_sp_JGI_0000059-M03 extrachromosomal linear Cluster_14 candidate_division_OP3_bacterium_sp_SCGC_AAA257-O07_ID_3295 hallmark 49;9;2;38 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Omnitrophica;unknown;unknown;unknown;unknown candidate_division_OP3_bacterium_sp_SCGC_AAA257-O07 extrachromosomal linear Cluster_461 candidate_division_WWE1_bacterium_sp_JGI_0000059-P03_ID_2723 Non-similarity 10;1;1;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Phic3unalikevirus;unknown Bacteria;Cloacimonetes;unknown;unknown;unknown;unknown candidate_division_WWE1_bacterium_sp_JGI_0000059-P03 extrachromosomal linear unclustered Clostridia_gi_148245107 hallmark;refseq 78;28;12;38 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium kluyveri DSM 555 extrachromosomal linear Cluster_530 Clostridia_gi_153883175-95370-130282 hallmark;refseq 51;26;2;23 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium botulinum C str. Eklund prophage linear Cluster_40 Clostridia_gi_153883184 refseq 49;34;4;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium botulinum C str. Eklund extrachromosomal linear Cluster_89 Clostridia_gi_153883197 refseq 15;12;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium botulinum C str. Eklund extrachromosomal linear Cluster_89 Clostridia_gi_153883612-29538-60066 hallmark;refseq 46;45;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium perfringens B str. ATCC 3626 prophage linear Cluster_375 Clostridia_gi_153883623 hallmark;refseq 34;23;3;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium perfringens B str. ATCC 3626 extrachromosomal linear Cluster_200 Clostridia_gi_153883714-0-33729 hallmark;refseq 45;33;3;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium perfringens E str. JGS1987 prophage linear Cluster_200 Clostridia_gi_153883716 hallmark;refseq 60;36;8;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium perfringens E str. JGS1987 extrachromosomal linear Cluster_77 Clostridia_gi_153883810 hallmark;refseq 64;34;2;28 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium perfringens CPE str. F4969 extrachromosomal linear Cluster_77 Clostridia_gi_153883811 hallmark;refseq 47;33;3;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium perfringens CPE str. F4969 extrachromosomal linear Cluster_77 Clostridia_gi_153930785-3101670-3140229 hallmark;refseq 60;30;9;21 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium botulinum A str. ATCC 19397 prophage linear Cluster_129 Clostridia_gi_160878162-3615270-3659755 hallmark;refseq;vdb 69;27;8;34 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium phytofermentans ISDg prophage linear Cluster_15 Clostridia_gi_169344351 hallmark 39;13;9;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium perfringens C str. JGS1495 extrachromosomal circular Cluster_30 Clostridia_gi_182418536 hallmark;refseq 9;5;;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium butyricum 5521 extrachromosomal linear Cluster_30 Clostridia_gi_182418547-372-22795 hallmark;vdb 27;6;8;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium butyricum 5521 prophage linear Cluster_152 Clostridia_gi_187932320-2821332-2873931 hallmark;refseq 83;42;13;28 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium botulinum B str. Eklund 17B prophage linear Cluster_95 Clostridia_gi_209401276-1065214-1110658 hallmark;refseq 60;45;1;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile QCD-32g58 prophage linear Cluster_15 Clostridia_gi_211596814 hallmark 90;18;23;49 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Eubacteriaceae;Eubacterium Eubacterium ventriosum ATCC 27560 extrachromosomal linear Cluster_236 Clostridia_gi_211596895-66269-137690 hallmark;refseq;vdb 95;22;34;39 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Lachnospiraceae;Blautia Ruminococcus torques ATCC 27756 prophage linear Cluster_226 Clostridia_gi_215539458 hallmark;refseq 22;19;;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile ATCC 43255 extrachromosomal linear Cluster_74 Clostridia_gi_219684126 hallmark;refseq 57;37;3;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile QCD-37x79 extrachromosomal linear Cluster_34 Clostridia_gi_219684127 hallmark;refseq 52;51;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Phic3unalikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile QCD-37x79 extrachromosomal linear Cluster_77 Clostridia_gi_219723305 hallmark 20;5;4;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile QCD-66c26 extrachromosomal linear Cluster_167 Clostridia_gi_219723360 hallmark 20;9;1;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile QCD-63q42 extrachromosomal linear Cluster_193 Clostridia_gi_219723361 hallmark;refseq 31;17;1;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile QCD-63q42 extrachromosomal linear Cluster_34 Clostridia_gi_219723362 hallmark;refseq 26;19;2;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile QCD-63q42 extrachromosomal linear Cluster_34 Clostridia_gi_219723363 hallmark;refseq 26;26;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Phic3unalikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile QCD-63q42 extrachromosomal linear Cluster_77 Clostridia_gi_219723364 hallmark;refseq 43;35;2;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile QCD-63q42 extrachromosomal linear Cluster_74 Clostridia_gi_219723366 refseq 113;39;11;63 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile QCD-63q42 extrachromosomal linear Cluster_176 Clostridia_gi_219723494 hallmark;refseq 67;41;4;22 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile QCD-97b34 extrachromosomal linear Cluster_34 Clostridia_gi_223667572-323765-376572 hallmark;refseq;vdb 67;24;14;29 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Lachnospiraceae;Dorea Dorea longicatena DSM 13814 prophage linear Cluster_227 Clostridia_gi_223956448-2418564-2449606 hallmark;refseq;vdb 47;17;4;26 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;unknown;unknown [Bacteroides] pectinophilus ATCC 43243 prophage linear Cluster_243 Clostridia_gi_224223425 hallmark;refseq 15;7;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium leptum DSM 753 extrachromosomal linear unclustered Clostridia_gi_224486038 hallmark 17;5;3;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium asparagiforme DSM 15981 extrachromosomal linear Cluster_459 Clostridia_gi_224486046 hallmark 38;6;4;28 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium asparagiforme DSM 15981 extrachromosomal linear Cluster_459 Clostridia_gi_224486047-87662-132698 hallmark;refseq;vdb 61;27;13;21 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium asparagiforme DSM 15981 prophage linear Cluster_15 Clostridia_gi_224486136 hallmark 88;15;14;59 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unclassified Bacteria;Firmicutes;Clostridia;Clostridiales;Lachnospiraceae;Blautia Blautia hydrogenotrophica DSM 10507 extrachromosomal linear Cluster_255 Clostridia_gi_224486139 refseq;vdb 61;18;5;38 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Lachnospiraceae;Blautia Blautia hydrogenotrophica DSM 10507 extrachromosomal linear Cluster_255 Clostridia_gi_224514672-1722306-1754535 hallmark;refseq;vdb 45;28;4;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile ATCC 43255 prophage linear Cluster_15 Clostridia_gi_224514679-1605411-1657174 hallmark;refseq 66;52;2;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile QCD-97b34 prophage linear Cluster_15 Clostridia_gi_224514680-1625520-1677280 hallmark;refseq 67;52;2;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile QCD-37x79 prophage linear Cluster_15 Clostridia_gi_224514686-1668856-1720618 hallmark;refseq 66;52;2;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile QCD-76w55 prophage linear Cluster_15 Clostridia_gi_224514732 hallmark 21;7;4;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium bolteae ATCC BAA-613 extrachromosomal linear Cluster_34 Clostridia_gi_224514887-60-13831 hallmark;vdb 16;5;;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Yualikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Eubacteriaceae;Eubacterium Eubacterium siraeum DSM 15702 prophage linear Cluster_244 Clostridia_gi_224514969-26510-67213 hallmark;refseq 64;24;6;34 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium scindens ATCC 35704 prophage linear Cluster_408 Clostridia_gi_224515013 hallmark;vdb 47;2;23;22 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium scindens ATCC 35704 extrachromosomal linear Cluster_500 Clostridia_gi_224531476-1620964-1672725 hallmark;refseq 66;52;2;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile QCD-66c26 prophage linear Cluster_15 Clostridia_gi_237642738 refseq;vdb 49;10;13;26 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium hathewayi DSM 13479 extrachromosomal linear Cluster_226 Clostridia_gi_237642771 hallmark;refseq 36;11;3;22 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium hathewayi DSM 13479 extrachromosomal linear Cluster_50 Clostridia_gi_237642775 hallmark;refseq 27;14;6;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium hathewayi DSM 13479 extrachromosomal linear Cluster_15 Clostridia_gi_237642811 hallmark 33;10;5;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium hathewayi DSM 13479 extrachromosomal linear Cluster_355 Clostridia_gi_237642835 hallmark 23;8;2;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium hathewayi DSM 13479 extrachromosomal linear Cluster_452 Clostridia_gi_237642836 refseq;vdb 20;5;3;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium hathewayi DSM 13479 extrachromosomal linear Cluster_17 Clostridia_gi_237643536-35553-83069 hallmark;refseq;vdb 61;22;16;23 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Ruminococcaceae;Ruminococcus Ruminococcus flavefaciens FD-1 prophage linear Cluster_42 Clostridia_gi_238909104 hallmark;refseq 98;37;18;43 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Firmicutes;Clostridia;Clostridiales;Eubacteriaceae;Eubacterium Eubacterium eligens ATCC 27750 extrachromosomal linear Cluster_335 Clostridia_gi_241911870 hallmark;vdb 21;6;5;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Lachnospiraceae;Marvinbryantia Marvinbryantia formatexigens DSM 14469 extrachromosomal linear Cluster_42 Clostridia_gi_255527911 hallmark 20;2;1;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;T4likevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium carboxidivorans P7 extrachromosomal linear unclustered Clostridia_gi_256402711-179985-228048 hallmark;refseq;vdb 65;15;18;32 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Lachnospiraceae;Blautia Blautia hansenii DSM 20583 prophage linear Cluster_236 Clostridia_gi_260681769-1676815-1730339 hallmark;refseq 68;51;2;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD196 prophage linear Cluster_15 Clostridia_gi_260685375-1674440-1726202 hallmark;refseq 66;52;2;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile R20291 prophage linear Cluster_15 Clostridia_gi_283767241-16075-65536 hallmark;refseq;vdb 66;15;19;32 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium sp. M62/1 prophage linear Cluster_236 Clostridia_gi_307243547 hallmark;refseq 39;17;6;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;Peptostreptococcus Peptostreptococcus stomatis DSM 17678 extrachromosomal linear Cluster_31 Clostridia_gi_307563182 hallmark;refseq 52;20;14;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium cellulovorans 743B extrachromosomal linear Cluster_20 Clostridia_gi_307563231-42424-87955 hallmark;vdb 49;17;13;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium cellulovorans 743B prophage linear Cluster_42 Clostridia_gi_307563406-0-27696 hallmark;refseq 37;21;6;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium cellulovorans 743B prophage linear Cluster_76 Clostridia_gi_313116151 hallmark;refseq 15;9;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Ruminococcaceae;Faecalibacterium Faecalibacterium cf. prausnitzii KLE1255 extrachromosomal linear Cluster_57 Clostridia_gi_313116189 hallmark 45;8;9;28 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Ruminococcaceae;Faecalibacterium Faecalibacterium cf. prausnitzii KLE1255 extrachromosomal linear Cluster_48 Clostridia_gi_313116233 refseq;vdb 49;8;7;34 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Firmicutes;Clostridia;Clostridiales;Ruminococcaceae;Faecalibacterium Faecalibacterium cf. prausnitzii KLE1255 extrachromosomal linear Cluster_42 Clostridia_gi_313116237 hallmark 88;22;18;48 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Ruminococcaceae;Faecalibacterium Faecalibacterium cf. prausnitzii KLE1255 extrachromosomal linear Cluster_77 Clostridia_gi_313897106 hallmark 63;20;7;36 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium sp. HGF2 extrachromosomal linear Cluster_31 Clostridia_gi_324035751-41009-118330 hallmark;refseq;vdb 100;32;19;49 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium symbiosum WAL-14163 prophage linear Cluster_226 Clostridia_gi_324035913-481009-519433 hallmark;refseq;vdb 56;22;6;28 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium symbiosum WAL-14673 prophage linear Cluster_408 Clostridia_gi_331268188-1296309-1329168 hallmark;refseq 51;27;4;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium botulinum BKT015925 prophage linear Cluster_488 Clostridia_gi_331270707 hallmark;refseq 55;23;3;29 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium botulinum BKT015925 extrachromosomal linear Cluster_413 Clostridia_gi_331640230-194003-280818 hallmark;refseq;vdb 100;37;28;35 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Lachnospiraceae;unknown Lachnospiraceae bacterium 3_1_46FAA prophage linear Cluster_42 Clostridia_gi_331640230-74256-106427 hallmark;refseq 61;28;4;29 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Lachnospiraceae;unknown Lachnospiraceae bacterium 3_1_46FAA prophage linear Cluster_57 Clostridia_gi_336423908-52859-71872 hallmark 25;8;3;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Lachnospiraceae;unknown Lachnospiraceae bacterium 5_1_57FAA prophage linear Cluster_227 Clostridia_gi_336423913 hallmark;refseq;vdb 74;22;24;28 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Lachnospiraceae;unknown Lachnospiraceae bacterium 5_1_57FAA extrachromosomal linear Cluster_77 Clostridia_gi_336440810-359795-415074 hallmark;refseq;vdb 76;21;23;32 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Firmicutes;Clostridia;Clostridiales;Lachnospiraceae;unknown Lachnospiraceae bacterium 1_1_57FAA prophage linear Cluster_220 Clostridia_gi_342731686-117088-156068 hallmark;refseq;vdb 54;28;11;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Candidatus Arthromitus Candidatus Arthromitus sp. SFB-mouse-Japan prophage linear Cluster_15 Clostridia_gi_345859137 hallmark 34;9;8;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptococcaceae;Desulfosporosinus Desulfosporosinus sp. OT extrachromosomal linear Cluster_236 Clostridia_gi_345861936 hallmark;refseq 60;24;5;31 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Firmicutes;Clostridia;Clostridiales;Peptococcaceae;Desulfosporosinus Desulfosporosinus sp. OT extrachromosomal linear Cluster_31 Clostridia_gi_355632064-60118-93388 hallmark;refseq;vdb 49;16;11;22 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium sp. 7_3_54FAA prophage linear Cluster_34 Clostridia_gi_355635008-30994-83331 hallmark;refseq;vdb 69;14;18;37 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium sp. 7_3_54FAA prophage linear Cluster_236 Clostridia_gi_355689648-74587-135725 hallmark;refseq;vdb 90;25;12;53 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium citroniae WAL-17108 prophage linear Cluster_226 Clostridia_gi_365137247-641329-700297 hallmark;vdb 83;20;10;53 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Ruminococcaceae;Subdoligranulum Subdoligranulum sp. 4_3_54A2FAA prophage linear Cluster_226 Clostridia_gi_365137247-96890-137931 hallmark;refseq;vdb 56;19;8;29 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Firmicutes;Clostridia;Clostridiales;Ruminococcaceae;Subdoligranulum Subdoligranulum sp. 4_3_54A2FAA prophage linear Cluster_20 Clostridia_gi_365845792 hallmark 28;10;4;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;unknown;Flavonifractor Flavonifractor plautii ATCC 29863 extrachromosomal linear Cluster_34 Clostridia_gi_365845821 refseq;vdb 33;5;6;22 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Firmicutes;Clostridia;Clostridiales;unknown;Flavonifractor Flavonifractor plautii ATCC 29863 extrachromosomal linear Cluster_495 Clostridia_gi_365845843 refseq;vdb 24;6;4;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Twortlikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;unknown;Flavonifractor Flavonifractor plautii ATCC 29863 extrachromosomal linear Cluster_89 Clostridia_gi_365845844 refseq;vdb 15;4;3;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;unknown;Flavonifractor Flavonifractor plautii ATCC 29863 extrachromosomal linear Cluster_152 Clostridia_gi_365845940 hallmark;refseq 47;15;8;24 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Spbetalikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;unknown;Flavonifractor Flavonifractor plautii ATCC 29863 extrachromosomal linear Cluster_40 Clostridia_gi_365845991-10830-52419 hallmark;refseq 60;21;10;29 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;unknown;Flavonifractor Flavonifractor plautii ATCC 29863 prophage linear Cluster_15 Clostridia_gi_373121103-353147-435681 hallmark;refseq;vdb 100;34;17;49 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Lachnospiraceae;unknown Lachnospiraceae bacterium 7_1_58FAA prophage linear Cluster_15 Clostridia_gi_373121127-22643-57257 hallmark;vdb 52;19;10;23 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Lachnospiraceae;unknown Lachnospiraceae bacterium 7_1_58FAA prophage linear Cluster_34 Clostridia_gi_373471558 hallmark;refseq 28;16;5;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Lachnospiraceae;unknown Lachnospiraceae bacterium oral taxon 082 str. F0431 extrachromosomal linear Cluster_15 Clostridia_gi_375092752-1310461-1348892 hallmark;refseq;vdb 56;31;3;22 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiales Family XI. Incertae Sedis;Helcococcus Helcococcus kunzii ATCC 51366 prophage linear Cluster_77 Clostridia_gi_383843666-1670235-1721988 hallmark;refseq 66;52;2;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile 2007855 prophage linear Cluster_15 Clostridia_gi_383843667 hallmark;refseq 68;41;3;24 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile BI1 extrachromosomal linear Cluster_34 Clostridia_gi_383843669-1686592-1738353 hallmark;refseq 66;52;2;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile BI1 prophage linear Cluster_15 Clostridia_gi_397904599-10862-52431 hallmark 65;23;9;33 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Caloramator Caloramator australicus RC3 prophage linear Cluster_48 Clostridia_gi_399579249 hallmark 58;11;5;42 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium arbusti SL206 extrachromosomal linear Cluster_167 Clostridia_gi_399579477 hallmark;refseq 48;24;4;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiales Family XI. Incertae Sedis;Peptoniphilus Peptoniphilus rhinitidis 1-13 extrachromosomal linear Cluster_57 Clostridia_gi_402835379 hallmark 95;16;34;45 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiales Family XIII. Incertae Sedis;Mogibacterium Mogibacterium sp. CM50 extrachromosomal linear Cluster_220 Clostridia_gi_402838105 hallmark;refseq 35;19;1;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Peptostreptococcaceae bacterium OBRC8 extrachromosomal linear Cluster_29 Clostridia_gi_402838822 hallmark;refseq 32;15;6;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Peptostreptococcaceae bacterium OBRC8 extrachromosomal linear Cluster_15 Clostridia_gi_410725548-0-62426 hallmark;refseq 102;34;21;47 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium sp. Maddingley MBC34-26 prophage linear Cluster_28 Clostridia_gi_410727720 hallmark;refseq 29;12;1;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium sp. Maddingley MBC34-26 extrachromosomal linear Cluster_291 Clostridia_gi_416348160-2570-54993 hallmark;refseq 84;33;12;39 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium botulinum C str. Stockholm prophage linear Cluster_95 Clostridia_gi_416348575 hallmark;refseq 38;33;;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium botulinum C str. Stockholm extrachromosomal linear Cluster_89 Clostridia_gi_416349179 refseq 30;29;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium botulinum C str. Stockholm extrachromosomal linear Cluster_89 Clostridia_gi_416350723 refseq 19;17;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium botulinum C str. Stockholm extrachromosomal linear Cluster_89 Clostridia_gi_416372985 hallmark;refseq 86;33;13;40 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium botulinum C str. Stockholm extrachromosomal linear Cluster_95 Clostridia_gi_417959728 refseq;vdb 14;6;2;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Candidatus Arthromitus Candidatus Arthromitus sp. SFB-1 extrachromosomal linear Cluster_15 Clostridia_gi_417967362 hallmark;refseq 19;11;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Candidatus Arthromitus Candidatus Arthromitus sp. SFB-5 extrachromosomal linear Cluster_15 Clostridia_gi_419719396 hallmark;refseq 40;17;7;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Lachnospiraceae;Lachnoanaerobaculum Lachnoanaerobaculum saburreum F0468 extrachromosomal linear Cluster_15 Clostridia_gi_422346908-263682-299784 hallmark;refseq 49;32;2;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium perfringens WAL-14572 prophage linear Cluster_200 Clostridia_gi_422348123 hallmark;refseq 59;34;5;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium perfringens WAL-14572 extrachromosomal linear Cluster_77 Clostridia_gi_423080687 hallmark;refseq 53;32;3;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile 002-P50-2011 extrachromosomal linear Cluster_34 Clostridia_gi_423083325-47386-96905 hallmark;refseq 61;44;3;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile 002-P50-2011 prophage linear Cluster_15 Clostridia_gi_423084762 hallmark;refseq 56;35;3;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile 050-P50-2011 extrachromosomal linear Cluster_34 Clostridia_gi_423088052-47090-95461 hallmark;refseq 60;45;2;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile 050-P50-2011 prophage linear Cluster_15 Clostridia_gi_424825740 hallmark;refseq 31;13;6;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium sporogenes PA 3679 extrachromosomal linear Cluster_126 Clostridia_gi_424826084 hallmark 73;17;13;43 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium sporogenes PA 3679 extrachromosomal linear Cluster_28 Clostridia_gi_424828341 hallmark;refseq 39;15;5;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium sporogenes PA 3679 extrachromosomal linear Cluster_77 Clostridia_gi_424834807 hallmark;refseq 30;13;6;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Punalikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium sporogenes PA 3679 extrachromosomal linear Cluster_529 Clostridia_gi_429244820 hallmark;refseq 59;24;6;29 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium botulinum CFSAN001628 extrachromosomal linear Cluster_126 Clostridia_gi_440782432-39828-81041 hallmark;refseq 51;33;3;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium pasteurianum DSM 525 prophage linear Cluster_200 Clostridia_gi_444384414-0-41581 hallmark;vdb 64;23;10;31 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Punalikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Lachnospiraceae;Anaerostipes Anaerostipes hadrus DSM 3319 prophage linear Cluster_490 Clostridia_gi_451816898-818683-861235 hallmark;refseq 50;28;7;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium saccharoperbutylacetonicum N1-4(HMT) prophage linear Cluster_15 Clostridia_gi_482919705 hallmark;refseq 52;22;9;21 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptococcaceae;Dehalobacter Dehalobacter sp. FTH1 extrachromosomal circular Cluster_15 Clostridia_gi_483046904-0-43059 hallmark 77;26;14;37 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium botulinum CDC66177 prophage linear Cluster_34 Clostridia_gi_483366699 hallmark;refseq 24;19;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD37 extrachromosomal linear Cluster_15 Clostridia_gi_483366921 hallmark;refseq 13;13;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD37 extrachromosomal linear Cluster_479 Clostridia_gi_483984649 hallmark 113;22;17;74 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Lachnospiraceae;Blautia Blautia producta ATCC 27340 = DSM 2950 extrachromosomal linear Cluster_310 Clostridia_gi_483984722 hallmark 69;18;7;44 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Lachnospiraceae;Blautia Blautia producta ATCC 27340 = DSM 2950 extrachromosomal linear Cluster_255 Clostridia_gi_483984762 hallmark;refseq 56;24;3;29 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Lachnospiraceae;Blautia Blautia producta ATCC 27340 = DSM 2950 extrachromosomal linear Cluster_243 Clostridia_gi_483984795 hallmark 24;7;1;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Lachnospiraceae;Blautia Blautia producta ATCC 27340 = DSM 2950 extrachromosomal linear Cluster_295 Clostridia_gi_483984821 hallmark;refseq 25;18;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Lachnospiraceae;Blautia Blautia producta ATCC 27340 = DSM 2950 extrachromosomal linear Cluster_197 Clostridia_gi_484030781 hallmark 10;2;2;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Ruminococcaceae;Ruminococcus Ruminococcus sp. JC304 extrachromosomal linear unclustered Clostridia_gi_484134973 hallmark;vdb 48;;24;24 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium saccharoperbutylacetonicum N1-4(HMT) extrachromosomal linear unclustered Clostridia_gi_484135380-17626-43175 hallmark;vdb 36;12;3;21 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium saccharoperbutylacetonicum N1-4(HMT) prophage linear unclustered Clostridia_gi_484135393 hallmark 106;28;15;63 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium saccharoperbutylacetonicum N1-4(HMT) extrachromosomal circular Cluster_393 Clostridia_gi_484142200 hallmark;refseq 87;33;22;32 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium botulinum CB11/1-1 extrachromosomal linear Cluster_55 Clostridia_gi_484165891 hallmark;refseq 84;30;9;45 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium tyrobutyricum DSM 2637 = ATCC 25755 = JCM 11008 extrachromosomal linear Cluster_291 Clostridia_gi_484165946 hallmark;vdb 16;5;1;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Spbetalikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium tyrobutyricum DSM 2637 = ATCC 25755 = JCM 11008 extrachromosomal linear Cluster_76 Clostridia_gi_484228595 refseq;vdb 14;7;2;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile ATCC 9689 = DSM 1296 extrachromosomal linear Cluster_176 Clostridia_gi_484228599 refseq 14;8;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile ATCC 9689 = DSM 1296 extrachromosomal linear Cluster_176 Clostridia_gi_484228627 hallmark;refseq 46;30;2;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile ATCC 9689 = DSM 1296 extrachromosomal linear Cluster_34 Clostridia_gi_484228664-0-43810 hallmark;refseq 72;53;2;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile ATCC 9689 = DSM 1296 prophage linear Cluster_15 Clostridia_gi_485044578 hallmark;refseq 55;27;7;21 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium botulinum BKT028387 extrachromosomal linear Cluster_488 Clostridia_gi_485044592 hallmark;refseq 45;21;3;21 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium botulinum BKT028387 extrachromosomal linear Cluster_126 Clostridia_gi_485045024 hallmark;refseq 60;43;3;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium botulinum V891 extrachromosomal linear Cluster_89 Clostridia_gi_485045048 refseq 40;23;4;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium botulinum V891 extrachromosomal linear Cluster_89 Clostridia_gi_485045056 hallmark;refseq 41;25;5;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium botulinum V891 extrachromosomal linear Cluster_95 Clostridia_gi_485045058 refseq 35;21;3;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium botulinum V891 extrachromosomal linear Cluster_89 Clostridia_gi_485045070 refseq 36;15;6;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Spbetalikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium botulinum V891 extrachromosomal linear Cluster_89 Clostridia_gi_485045091 hallmark;refseq 32;18;5;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium botulinum V891 extrachromosomal linear Cluster_17 Clostridia_gi_485045145 hallmark;refseq 14;8;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium botulinum V891 extrachromosomal linear Cluster_413 Clostridia_gi_485045194 hallmark;refseq 20;12;1;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium botulinum V891 extrachromosomal linear Cluster_413 Clostridia_gi_485075759-38224-92961 hallmark;refseq;vdb 81;40;9;32 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;Peptostreptococcus Peptostreptococcus anaerobius DSM 2949 prophage linear Cluster_34 Clostridia_gi_485075893 refseq 22;10;;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Spbetalikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;Peptostreptococcus Peptostreptococcus anaerobius DSM 2949 extrachromosomal linear Cluster_208 Clostridia_gi_485075904 refseq 15;9;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;Peptostreptococcus Peptostreptococcus anaerobius DSM 2949 extrachromosomal linear Cluster_208 Clostridia_gi_485091781 hallmark 15;4;2;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Yualikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Eubacteriaceae;Eubacterium Eubacterium siraeum DSM 15702 extrachromosomal linear Cluster_244 Clostridia_gi_490177391 hallmark;refseq 57;16;6;35 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium sp. ASF502 extrachromosomal linear Cluster_42 Clostridia_gi_490182861-399957-424965 hallmark;refseq;vdb 31;6;8;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium sp. ASF502 prophage linear Cluster_48 Clostridia_gi_490539173 hallmark;refseq 38;21;6;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Firmicutes;Clostridia;Thermoanaerobacterales;Thermoanaerobacteraceae;Thermoanaerobacter Thermoanaerobacter thermohydrosulfuricus WC1 extrachromosomal linear Cluster_104 Clostridia_gi_490540426 hallmark 18;7;2;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Thermoanaerobacterales;Thermoanaerobacteraceae;Thermoanaerobacter Thermoanaerobacter thermohydrosulfuricus WC1 extrachromosomal linear Cluster_104 Clostridia_gi_499152390 hallmark;refseq 50;16;4;30 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium tyrobutyricum DSM 2637 = ATCC 25755 = JCM 11008 extrachromosomal linear Cluster_291 Clostridia_gi_499152505 refseq 29;14;3;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium tyrobutyricum DSM 2637 = ATCC 25755 = JCM 11008 extrachromosomal linear Cluster_291 Clostridia_gi_499153052 hallmark;refseq 14;9;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium tyrobutyricum DSM 2637 = ATCC 25755 = JCM 11008 extrachromosomal linear Cluster_42 Clostridia_gi_510836939 hallmark;refseq 36;21;2;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium sartagoforme AAU1 extrachromosomal linear Cluster_55 Clostridia_gi_512436336 hallmark 124;21;62;41 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Lachnospiraceae;unknown Lachnospiraceae bacterium A4 extrachromosomal linear Cluster_42 Clostridia_gi_512436369 hallmark;refseq 48;16;12;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Lachnospiraceae;unknown Lachnospiraceae bacterium 3-1 extrachromosomal linear Cluster_42 Clostridia_gi_512436376 hallmark;refseq 23;9;4;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Lachnospiraceae;unknown Lachnospiraceae bacterium 3-1 extrachromosomal linear Cluster_20 Clostridia_gi_512436394 hallmark 102;28;26;48 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Lachnospiraceae;unknown Lachnospiraceae bacterium 28-4 extrachromosomal linear Cluster_20 Clostridia_gi_512438407 hallmark;refseq 33;19;1;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Firmicutes;Clostridia;Clostridiales;Lachnospiraceae;unknown Lachnospiraceae bacterium M18-1 extrachromosomal linear Cluster_197 Clostridia_gi_512438408 hallmark;refseq 28;11;1;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Lachnospiraceae;unknown Lachnospiraceae bacterium M18-1 extrachromosomal linear Cluster_227 Clostridia_gi_514231917 hallmark 93;15;6;72 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Lachnospiraceae;unknown Lachnospiraceae bacterium A2 extrachromosomal linear Cluster_295 Clostridia_gi_514231939 hallmark 39;12;9;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Ruminococcaceae;Anaerotruncus Anaerotruncus sp. G3(2012) extrachromosomal linear Cluster_158 Clostridia_gi_537985678-1655908-1720767 hallmark;refseq;vdb 87;23;16;48 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Ruminococcaceae;Ruminococcus Ruminococcus sp. 5_1_39BFAA prophage linear Cluster_310 Clostridia_gi_544673572-0-26398 hallmark;refseq 37;18;4;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium botulinum Af84 prophage linear Cluster_126 Clostridia_gi_544673572-26476-62720 hallmark;refseq 54;14;11;29 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium botulinum Af84 prophage linear Cluster_28 Clostridia_gi_544690375 hallmark;refseq 58;32;5;21 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium sordellii ATCC 9714 extrachromosomal linear Cluster_129 Clostridia_gi_544703850 hallmark 68;21;12;35 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium botulinum CFSAN002367 extrachromosomal linear Cluster_28 Clostridia_gi_544703972-0-43716 hallmark 80;18;11;51 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Spbetalikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium botulinum CFSAN002367 prophage linear Cluster_126 Clostridia_gi_544704046 refseq 32;11;1;20 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium botulinum CFSAN002367 extrachromosomal linear Cluster_220 Clostridia_gi_544704120 hallmark;refseq 33;13;3;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Punalikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium botulinum CFSAN002367 extrachromosomal linear Cluster_529 Clostridia_gi_544704931 hallmark 32;5;3;24 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium botulinum A1 str. CFSAN002368 extrachromosomal linear Cluster_291 Clostridia_gi_544704943 hallmark;refseq 30;19;3;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium botulinum A1 str. CFSAN002368 extrachromosomal linear Cluster_126 Clostridia_gi_544953209 hallmark;refseq 43;30;1;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD3 extrachromosomal linear Cluster_15 Clostridia_gi_544953227 hallmark;refseq 20;16;;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD3 extrachromosomal linear Cluster_15 Clostridia_gi_544954104 hallmark;refseq 76;62;2;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD3 extrachromosomal linear Cluster_104 Clostridia_gi_544954871 hallmark;refseq 44;39;;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD8 extrachromosomal linear Cluster_129 Clostridia_gi_544954879 hallmark;refseq 20;18;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD8 extrachromosomal linear Cluster_104 Clostridia_gi_544955628 hallmark;refseq 15;14;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD8 extrachromosomal linear Cluster_67 Clostridia_gi_544956067 hallmark;refseq 23;22;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD8 extrachromosomal linear Cluster_129 Clostridia_gi_544956151 hallmark;refseq 39;36;;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD9 extrachromosomal linear Cluster_129 Clostridia_gi_544956168 hallmark;refseq 42;35;;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD9 extrachromosomal linear Cluster_15 Clostridia_gi_544956290 hallmark;refseq 22;18;1;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD9 extrachromosomal linear Cluster_15 Clostridia_gi_544956385 hallmark;refseq 26;21;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD9 extrachromosomal linear Cluster_129 Clostridia_gi_544956489 hallmark;refseq 15;9;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD9 extrachromosomal linear Cluster_52 Clostridia_gi_544957317 hallmark;refseq 26;22;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD17 extrachromosomal linear Cluster_104 Clostridia_gi_544957770 hallmark;refseq 16;14;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD17 extrachromosomal linear Cluster_95 Clostridia_gi_544959358-34968-84117 hallmark;refseq 74;67;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD21 prophage linear Cluster_67 Clostridia_gi_544960609 hallmark;refseq 23;16;;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD22 extrachromosomal linear Cluster_158 Clostridia_gi_544960801-10072-51160 hallmark;refseq 56;31;5;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD22 prophage linear Cluster_424 Clostridia_gi_544961837 hallmark;refseq 35;26;1;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD34 extrachromosomal linear Cluster_84 Clostridia_gi_544961859 hallmark;refseq 23;15;2;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD34 extrachromosomal linear Cluster_84 Clostridia_gi_544963344-8075-31204 hallmark;refseq;vdb 38;24;4;10 Viruses;unclassified;unclassified;unclassified;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD38 prophage linear Cluster_84 Clostridia_gi_544963951 hallmark 18;9;3;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD39 extrachromosomal linear Cluster_339 Clostridia_gi_544964358 hallmark;refseq 36;31;;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD40 extrachromosomal linear Cluster_74 Clostridia_gi_544964438 hallmark;refseq 73;42;5;26 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD40 extrachromosomal linear Cluster_34 Clostridia_gi_544965394 hallmark;refseq 48;34;3;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD42 extrachromosomal linear Cluster_219 Clostridia_gi_544966223 refseq 106;34;10;62 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD43 extrachromosomal linear Cluster_176 Clostridia_gi_544966424 hallmark;refseq 28;25;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD43 extrachromosomal linear Cluster_15 Clostridia_gi_544966436 hallmark;refseq 73;43;5;25 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD43 extrachromosomal circular Cluster_34 Clostridia_gi_544966903 hallmark;refseq 42;34;2;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD43 extrachromosomal linear Cluster_95 Clostridia_gi_544967458-49-54192 hallmark;refseq 83;63;4;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD44 prophage linear Cluster_15 Clostridia_gi_544968212 hallmark;refseq 61;38;4;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD45 extrachromosomal linear Cluster_34 Clostridia_gi_544968278 refseq 74;28;5;41 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Spbetalikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD45 extrachromosomal linear Cluster_208 Clostridia_gi_544968332 refseq 18;17;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD45 extrachromosomal linear Cluster_77 Clostridia_gi_544968566 hallmark;refseq 37;30;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD45 extrachromosomal linear Cluster_15 Clostridia_gi_544968674-10083-47528 hallmark;refseq 48;29;4;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD45 prophage linear Cluster_84 Clostridia_gi_544969398 hallmark;refseq 31;31;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD47 extrachromosomal linear Cluster_77 Clostridia_gi_544969411 refseq 16;15;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD47 extrachromosomal linear Cluster_77 Clostridia_gi_544969431 hallmark;refseq 24;14;;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD47 extrachromosomal linear Cluster_34 Clostridia_gi_544969544 refseq 15;12;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD47 extrachromosomal linear Cluster_34 Clostridia_gi_544969680 hallmark 18;9;;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD47 extrachromosomal linear Cluster_193 Clostridia_gi_544969706-0-25694 hallmark;refseq 44;36;2;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD47 prophage linear Cluster_74 Clostridia_gi_544969766 hallmark;refseq 24;21;;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD49 extrachromosomal linear Cluster_104 Clostridia_gi_544969844 refseq 101;37;15;49 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD49 extrachromosomal linear Cluster_176 Clostridia_gi_544969915 hallmark;refseq 49;47;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD49 extrachromosomal linear Cluster_287 Clostridia_gi_544970409 refseq 16;13;;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD51 extrachromosomal linear Cluster_34 Clostridia_gi_544970425 hallmark;refseq 19;14;;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD51 extrachromosomal linear Cluster_479 Clostridia_gi_544970532-47617-78949 hallmark;refseq 41;29;3;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD51 prophage linear Cluster_15 Clostridia_gi_544971024 hallmark;refseq 51;27;4;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD51 extrachromosomal linear Cluster_34 Clostridia_gi_544971204 hallmark;refseq 44;28;6;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD68 extrachromosomal linear Cluster_396 Clostridia_gi_544972094 hallmark;refseq 16;13;;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD69 extrachromosomal linear Cluster_111 Clostridia_gi_544974273 hallmark;refseq 36;35;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD70 extrachromosomal linear Cluster_15 Clostridia_gi_544974425 hallmark;refseq 27;27;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD70 extrachromosomal linear Cluster_67 Clostridia_gi_544974655 hallmark;refseq 33;30;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD86 extrachromosomal linear Cluster_15 Clostridia_gi_544974817 hallmark;refseq 36;28;2;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD86 extrachromosomal linear Cluster_95 Clostridia_gi_544974822 refseq 23;18;;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD86 extrachromosomal linear Cluster_74 Clostridia_gi_544974893 refseq 31;18;1;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD86 extrachromosomal linear Cluster_34 Clostridia_gi_544974911 hallmark;refseq 41;25;3;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD86 extrachromosomal linear Cluster_34 Clostridia_gi_544974919 refseq 26;10;2;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD86 extrachromosomal linear Cluster_208 Clostridia_gi_544974967 refseq;vdb 70;26;5;39 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Spbetalikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD88 extrachromosomal linear Cluster_208 Clostridia_gi_544975022 refseq 115;36;12;67 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD88 extrachromosomal linear Cluster_176 Clostridia_gi_544975120 hallmark;refseq 12;10;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD88 extrachromosomal linear Cluster_111 Clostridia_gi_544975200-8040-46525 hallmark;refseq 61;38;7;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD88 prophage linear Cluster_84 Clostridia_gi_544975336 hallmark;refseq 24;17;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD88 extrachromosomal linear Cluster_95 Clostridia_gi_544975936 hallmark;refseq 20;15;;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD92 extrachromosomal linear Cluster_404 Clostridia_gi_544975979 hallmark;refseq 39;19;7;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD92 extrachromosomal linear Cluster_193 Clostridia_gi_544976382-0-26434 hallmark;refseq 44;36;2;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD92 prophage linear Cluster_74 Clostridia_gi_544977368 refseq 25;22;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD111 extrachromosomal linear Cluster_74 Clostridia_gi_544977688 hallmark;refseq 17;17;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD111 extrachromosomal linear Cluster_67 Clostridia_gi_544977697 hallmark;refseq 21;12;2;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD111 extrachromosomal linear Cluster_67 Clostridia_gi_544977890 hallmark;refseq 55;49;1;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD113 extrachromosomal linear Cluster_129 Clostridia_gi_544977904 hallmark;refseq 17;15;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD113 extrachromosomal linear Cluster_15 Clostridia_gi_544978902 hallmark;refseq 54;37;5;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD127 extrachromosomal linear Cluster_84 Clostridia_gi_544978907 hallmark;refseq 19;17;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD127 extrachromosomal linear Cluster_99 Clostridia_gi_544979052 refseq 9;7;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD127 extrachromosomal linear Cluster_511 Clostridia_gi_544979865 hallmark;refseq 71;63;2;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD127 extrachromosomal linear Cluster_67 Clostridia_gi_544980400 refseq 31;24;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD129 extrachromosomal linear Cluster_74 Clostridia_gi_544980419 hallmark;refseq 18;14;1;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD129 extrachromosomal linear Cluster_99 Clostridia_gi_544980574-2676-18747 refseq 23;14;4;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD129 prophage linear Cluster_152 Clostridia_gi_544981648 refseq;vdb 25;8;1;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Spbetalikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD129 extrachromosomal linear Cluster_208 Clostridia_gi_544981831 hallmark;refseq 32;29;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD131 extrachromosomal linear Cluster_15 Clostridia_gi_544981832 hallmark;refseq 72;42;5;25 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD131 extrachromosomal circular Cluster_34 Clostridia_gi_544981942 hallmark;refseq 42;34;2;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD131 extrachromosomal linear Cluster_95 Clostridia_gi_544982686 refseq 105;30;11;64 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD133 extrachromosomal linear Cluster_176 Clostridia_gi_544983005-105518-126600 hallmark;refseq 41;35;1;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD144 prophage linear Cluster_74 Clostridia_gi_544983269 refseq 71;28;3;40 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Spbetalikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD149 extrachromosomal linear Cluster_208 Clostridia_gi_544983294 refseq 115;36;11;68 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD149 extrachromosomal linear Cluster_176 Clostridia_gi_544983343 hallmark;refseq 45;37;2;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD149 extrachromosomal linear Cluster_95 Clostridia_gi_544983345 hallmark;refseq 73;43;5;25 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD149 extrachromosomal linear Cluster_34 Clostridia_gi_544983421 hallmark;refseq 28;25;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD149 extrachromosomal linear Cluster_15 Clostridia_gi_544983612 hallmark;refseq 49;35;3;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD159 extrachromosomal linear Cluster_219 Clostridia_gi_544984104 hallmark;refseq 48;38;1;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD160 extrachromosomal circular Cluster_77 Clostridia_gi_544984655-35557-57674 hallmark;refseq 28;21;3;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD160 prophage linear Cluster_34 Clostridia_gi_544985573 hallmark;refseq 17;16;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD160 extrachromosomal linear Cluster_15 Clostridia_gi_544986654-4573-19948 hallmark;refseq;vdb 20;12;2;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD160 prophage linear Cluster_200 Clostridia_gi_544986678 refseq 18;9;6;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD160 extrachromosomal linear Cluster_309 Clostridia_gi_544987717 hallmark;refseq 19;13;1;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD160 extrachromosomal linear Cluster_15 Clostridia_gi_544988586 hallmark 32;14;5;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD160 extrachromosomal linear Cluster_84 Clostridia_gi_544988754-148-36437 hallmark;refseq;vdb 55;36;7;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD165 prophage linear Cluster_219 Clostridia_gi_544988983 hallmark;refseq 58;33;5;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD166 extrachromosomal linear Cluster_34 Clostridia_gi_544989019 refseq 34;25;1;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD166 extrachromosomal linear Cluster_397 Clostridia_gi_544989024 hallmark;refseq 28;25;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD166 extrachromosomal linear Cluster_15 Clostridia_gi_544989082 hallmark;refseq 41;33;2;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD166 extrachromosomal linear Cluster_95 Clostridia_gi_544989187 refseq;vdb 19;13;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD169 extrachromosomal linear Cluster_111 Clostridia_gi_544989454 refseq 39;18;6;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD170 extrachromosomal linear Cluster_176 Clostridia_gi_544989563 refseq 31;15;2;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD170 extrachromosomal linear Cluster_34 Clostridia_gi_544989567 hallmark;refseq 22;16;1;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD170 extrachromosomal linear Cluster_15 Clostridia_gi_544989798-0-22767 hallmark;refseq 38;27;3;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD170 prophage linear Cluster_74 Clostridia_gi_544990174 hallmark;refseq 41;30;2;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD175 extrachromosomal linear Cluster_15 Clostridia_gi_544990179 hallmark;refseq 22;18;1;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD175 extrachromosomal linear Cluster_99 Clostridia_gi_544990188 hallmark;refseq 36;31;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD175 extrachromosomal linear Cluster_34 Clostridia_gi_544990336 refseq 25;16;4;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD175 extrachromosomal linear Cluster_152 Clostridia_gi_544991956 hallmark 18;9;;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD181 extrachromosomal linear Cluster_193 Clostridia_gi_544991984-0-26031 hallmark;refseq 44;36;2;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD181 prophage linear Cluster_74 Clostridia_gi_544992425 hallmark;refseq 12;10;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD196 extrachromosomal linear Cluster_15 Clostridia_gi_544992568 refseq 21;13;4;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD196 extrachromosomal linear Cluster_152 Clostridia_gi_544993791 hallmark;refseq 28;25;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD200 extrachromosomal linear Cluster_15 Clostridia_gi_544993848 hallmark;refseq 36;28;2;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD200 extrachromosomal linear Cluster_95 Clostridia_gi_544994020 refseq 99;34;12;53 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD200 extrachromosomal linear Cluster_176 Clostridia_gi_544994029 hallmark;refseq 73;42;6;25 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD200 extrachromosomal linear Cluster_34 Clostridia_gi_544994035 refseq 27;21;1;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD200 extrachromosomal linear Cluster_397 Clostridia_gi_544994751 hallmark;refseq 29;23;1;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD211 extrachromosomal linear Cluster_74 Clostridia_gi_544994757 hallmark;refseq 29;18;2;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD211 extrachromosomal linear Cluster_84 Clostridia_gi_544994778 hallmark;refseq 18;12;1;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile CD211 extrachromosomal linear Cluster_15 Clostridia_gi_544995746 hallmark;refseq 41;37;1;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile 655 extrachromosomal linear Cluster_129 Clostridia_gi_544995855 hallmark;refseq 66;40;5;21 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile 655 extrachromosomal linear Cluster_34 Clostridia_gi_544995858-10095-57803 hallmark;refseq 59;43;3;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile 655 prophage linear Cluster_15 Clostridia_gi_544996213 hallmark;refseq 21;14;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile 824 extrachromosomal linear Cluster_15 Clostridia_gi_544996218 hallmark;refseq 20;12;;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile 824 extrachromosomal linear Cluster_111 Clostridia_gi_544996229 hallmark;refseq 28;28;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile 824 extrachromosomal linear Cluster_67 Clostridia_gi_544996279 hallmark;refseq 31;27;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile 824 extrachromosomal linear Cluster_251 Clostridia_gi_544996720-26564-47833 hallmark;refseq 42;31;1;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile 840 prophage linear Cluster_470 Clostridia_gi_544996728-0-13677 hallmark;refseq 24;23;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile 840 prophage linear Cluster_111 Clostridia_gi_544997289 hallmark 13;6;3;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile 842 extrachromosomal linear Cluster_339 Clostridia_gi_544997337-10177-31046 hallmark;refseq;vdb 36;23;4;9 Viruses;unclassified;unclassified;unclassified;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile 842 prophage linear Cluster_84 Clostridia_gi_544997621 hallmark;refseq 50;35;2;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile 6041 extrachromosomal linear Cluster_74 Clostridia_gi_544998353 hallmark;refseq 45;22;4;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile 6042 extrachromosomal linear Cluster_34 Clostridia_gi_544998434 hallmark;refseq 57;43;2;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile 6042 extrachromosomal linear Cluster_396 Clostridia_gi_544998684 hallmark 15;7;1;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile 6057 extrachromosomal linear Cluster_34 Clostridia_gi_544998882 hallmark;refseq 20;15;;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile 6057 extrachromosomal linear Cluster_15 Clostridia_gi_544998928 refseq 16;13;;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile 6057 extrachromosomal linear Cluster_34 Clostridia_gi_544999095-49-17389 hallmark;refseq 21;14;2;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile 6057 prophage linear Cluster_396 Clostridia_gi_544999328 hallmark;refseq 29;17;4;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile DA00044 extrachromosomal linear Cluster_111 Clostridia_gi_544999597 hallmark;refseq 38;37;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile DA00062 extrachromosomal linear Cluster_287 Clostridia_gi_544999756 hallmark;refseq 31;29;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile DA00062 extrachromosomal linear Cluster_67 Clostridia_gi_545000286 hallmark;refseq 20;12;4;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile DA00065 extrachromosomal linear Cluster_309 Clostridia_gi_545000592 hallmark;refseq 61;36;4;21 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile DA00065 extrachromosomal linear Cluster_34 Clostridia_gi_545000702-159-15689 hallmark;refseq 24;22;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile DA00114 prophage linear Cluster_67 Clostridia_gi_545000730-12518-44765 hallmark;refseq 53;38;4;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile DA00114 prophage linear Cluster_84 Clostridia_gi_545000837 hallmark;refseq 26;21;;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile DA00114 extrachromosomal linear Cluster_104 Clostridia_gi_545000977 hallmark;refseq 53;21;6;26 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile DA00126 extrachromosomal linear Cluster_208 Clostridia_gi_545001079-51887-100663 hallmark;refseq 83;68;2;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile DA00126 prophage linear Cluster_104 Clostridia_gi_545002097-8761-32058 hallmark;refseq 47;39;;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile DA00129 prophage linear Cluster_74 Clostridia_gi_545002311 hallmark;refseq 33;28;;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile DA00129 extrachromosomal linear Cluster_104 Clostridia_gi_545002610 hallmark;refseq 33;26;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile DA00131 extrachromosomal linear Cluster_15 Clostridia_gi_545002615 hallmark;refseq 13;11;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile DA00131 extrachromosomal linear Cluster_111 Clostridia_gi_545002719 hallmark;refseq 26;26;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile DA00131 extrachromosomal linear Cluster_104 Clostridia_gi_545002878 hallmark;refseq 57;31;4;22 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile DA00132 extrachromosomal linear Cluster_34 Clostridia_gi_545002883 hallmark;refseq 19;15;;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile DA00132 extrachromosomal linear Cluster_15 Clostridia_gi_545003308-33321-54980 hallmark;refseq 29;21;1;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile DA00134 prophage linear Cluster_15 Clostridia_gi_545003827 hallmark;refseq 18;14;;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile DA00142 extrachromosomal linear Cluster_15 Clostridia_gi_545003911-10129-42312 hallmark;refseq 45;32;1;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile DA00142 prophage linear Cluster_15 Clostridia_gi_545004420 hallmark;vdb 22;5;7;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile DA00145 extrachromosomal linear Cluster_167 Clostridia_gi_545004609-6980-29020 hallmark;refseq 47;43;;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile DA00145 prophage linear Cluster_74 Clostridia_gi_545004626 hallmark;refseq 24;19;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile DA00145 extrachromosomal linear Cluster_15 Clostridia_gi_545004628 hallmark;refseq 16;15;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile DA00145 extrachromosomal linear Cluster_287 Clostridia_gi_545004842-8006-32727 hallmark;refseq;vdb 32;21;3;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile DA00145 prophage linear Cluster_15 Clostridia_gi_545005980 hallmark;refseq 97;52;22;23 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile DA00154 extrachromosomal linear Cluster_219 Clostridia_gi_545011147-110641-159417 hallmark;refseq 83;68;2;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile DA00165 prophage linear Cluster_104 Clostridia_gi_545013016-49294-107666 hallmark;refseq 95;73;3;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile DA00174 prophage linear Cluster_67 Clostridia_gi_545013272 hallmark;refseq 48;34;3;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile DA00183 extrachromosomal linear Cluster_219 Clostridia_gi_545013277 hallmark;refseq 25;16;2;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile DA00183 extrachromosomal linear Cluster_111 Clostridia_gi_545013531 refseq;vdb 8;3;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile DA00189 extrachromosomal linear Cluster_138 Clostridia_gi_545013557 hallmark;refseq 28;26;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile DA00189 extrachromosomal linear Cluster_15 Clostridia_gi_545013623-10105-57898 hallmark;refseq 73;53;5;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile DA00189 prophage linear Cluster_67 Clostridia_gi_545013813-51851-85068 hallmark;refseq 59;47;2;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile DA00191 prophage linear Cluster_104 Clostridia_gi_545013896 hallmark;refseq 75;46;4;25 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile DA00191 extrachromosomal circular Cluster_34 Clostridia_gi_545013898 hallmark;refseq 16;14;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile DA00191 extrachromosomal linear Cluster_104 Clostridia_gi_545013926-10497-64120 hallmark;refseq 71;52;2;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile DA00191 prophage linear Cluster_15 Clostridia_gi_545014161 hallmark;refseq 22;13;2;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile DA00193 extrachromosomal linear Cluster_111 Clostridia_gi_545014294-51839-85347 hallmark;refseq 60;47;2;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile DA00195 prophage linear Cluster_104 Clostridia_gi_545014656 hallmark;refseq 27;18;1;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile DA00196 extrachromosomal linear Cluster_15 Clostridia_gi_545014903 hallmark;refseq 25;18;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile DA00196 extrachromosomal linear Cluster_99 Clostridia_gi_545014906 refseq 14;12;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile DA00196 extrachromosomal linear Cluster_99 Clostridia_gi_545015022-228245-273032 hallmark;refseq 64;45;2;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile DA00196 prophage linear Cluster_15 Clostridia_gi_545015325 hallmark;refseq 21;18;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile DA00196 extrachromosomal linear Cluster_99 Clostridia_gi_545015846 hallmark;refseq 13;7;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile DA00210 extrachromosomal linear Cluster_339 Clostridia_gi_545015959 hallmark;refseq 17;16;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile DA00210 extrachromosomal linear Cluster_15 Clostridia_gi_545015962 hallmark;refseq 24;24;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile DA00210 extrachromosomal linear Cluster_67 Clostridia_gi_545016948 hallmark;refseq 47;24;5;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile DA00211 extrachromosomal linear Cluster_34 Clostridia_gi_545017454 refseq 24;13;3;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile DA00212 extrachromosomal linear Cluster_219 Clostridia_gi_545017658-12536-47566 hallmark;refseq 46;32;2;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile DA00215 prophage linear Cluster_15 Clostridia_gi_545017662 hallmark;refseq 21;15;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile DA00215 extrachromosomal linear Cluster_111 Clostridia_gi_545017943-14335-63007 hallmark;refseq 72;65;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile DA00216 prophage linear Cluster_67 Clostridia_gi_545018124 refseq 29;16;7;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile DA00216 extrachromosomal linear Cluster_152 Clostridia_gi_545018837 refseq 32;24;1;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile DA00232 extrachromosomal linear Cluster_470 Clostridia_gi_545018978 hallmark;refseq 36;31;;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile DA00238 extrachromosomal linear Cluster_74 Clostridia_gi_545019023 hallmark;refseq 64;36;4;24 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile DA00238 extrachromosomal linear Cluster_34 Clostridia_gi_545019144 hallmark;refseq 47;46;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Phic3unalikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile DA00238 extrachromosomal linear Cluster_77 Clostridia_gi_545019489-10107-29800 refseq;vdb 36;23;4;9 Viruses;unclassified;unclassified;unclassified;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile DA00245 prophage linear Cluster_84 Clostridia_gi_545019801 hallmark;refseq 16;16;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile DA00245 extrachromosomal linear Cluster_104 Clostridia_gi_545019830 hallmark;refseq 17;16;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile DA00245 extrachromosomal linear Cluster_67 Clostridia_gi_545019850 hallmark;refseq 35;34;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile DA00246 extrachromosomal linear Cluster_34 Clostridia_gi_545019888 hallmark;refseq 32;17;2;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile DA00246 extrachromosomal linear Cluster_55 Clostridia_gi_545019896 hallmark;refseq 42;23;4;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile DA00246 extrachromosomal linear Cluster_34 Clostridia_gi_545019949 refseq 28;14;2;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile DA00246 extrachromosomal linear Cluster_34 Clostridia_gi_545020309 hallmark;refseq 26;18;2;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile DA00256 extrachromosomal linear Cluster_15 Clostridia_gi_545020338-7753-22812 refseq 32;20;3;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile DA00256 prophage linear Cluster_84 Clostridia_gi_545020398 refseq 30;16;7;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile DA00256 extrachromosomal linear Cluster_152 Clostridia_gi_545020459 refseq 38;23;5;10 Viruses;unclassified;unclassified;unclassified;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile DA00256 extrachromosomal linear Cluster_84 Clostridia_gi_545020692 hallmark;refseq 29;19;3;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile DA00256 extrachromosomal linear Cluster_104 Clostridia_gi_545021218 hallmark;refseq 43;33;1;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile DA00273 extrachromosomal linear Cluster_74 Clostridia_gi_545021263 refseq 16;9;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile DA00273 extrachromosomal linear Cluster_404 Clostridia_gi_545021272 hallmark;refseq 55;33;4;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile DA00273 extrachromosomal linear Cluster_34 Clostridia_gi_545021469 hallmark 17;8;;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile DA00273 extrachromosomal linear Cluster_193 Clostridia_gi_545021980 hallmark;refseq 39;32;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile DA00305 extrachromosomal linear Cluster_74 Clostridia_gi_545022051 refseq 13;8;;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile DA00305 extrachromosomal linear Cluster_404 Clostridia_gi_545022081 refseq 20;13;3;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile DA00305 extrachromosomal linear Cluster_152 Clostridia_gi_545022581 hallmark;refseq 25;13;2;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile DA00305 extrachromosomal linear Cluster_193 Clostridia_gi_545022887 hallmark 15;7;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile DA00306 extrachromosomal linear Cluster_15 Clostridia_gi_545022922-47477-71257 hallmark;refseq 43;29;4;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile DA00306 prophage linear Cluster_84 Clostridia_gi_545023108 hallmark 26;12;1;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile DA00307 extrachromosomal linear Cluster_193 Clostridia_gi_545023148-49570-73115 hallmark;refseq 48;37;;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile DA00307 prophage linear Cluster_74 Clostridia_gi_545023166 hallmark;refseq 64;38;4;22 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile DA00307 extrachromosomal linear Cluster_34 Clostridia_gi_545023332 hallmark;refseq 54;51;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile DA00307 extrachromosomal linear Cluster_129 Clostridia_gi_545023643 hallmark;refseq 71;55;2;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile DA00310 extrachromosomal linear Cluster_15 Clostridia_gi_545024716-0-52375 hallmark;refseq 81;49;5;27 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile F152 prophage linear Cluster_34 Clostridia_gi_545024826 hallmark;refseq 57;36;9;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile F249 extrachromosomal linear Cluster_219 Clostridia_gi_545025134 hallmark;vdb 16;4;3;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile F253 extrachromosomal linear Cluster_167 Clostridia_gi_545025285 hallmark;refseq 42;32;1;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile F253 extrachromosomal linear Cluster_15 Clostridia_gi_545025400 refseq 30;16;7;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile F253 extrachromosomal linear Cluster_152 Clostridia_gi_545025453 hallmark;refseq 29;21;5;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile F253 extrachromosomal linear Cluster_99 Clostridia_gi_545026636-0-37230 hallmark;refseq 48;26;4;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile F314 prophage linear Cluster_424 Clostridia_gi_545030157 hallmark;refseq 56;50;1;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile Y10 extrachromosomal linear Cluster_129 Clostridia_gi_545030182 hallmark;refseq 71;45;4;22 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile Y10 extrachromosomal linear Cluster_34 Clostridia_gi_545030500 refseq 26;13;3;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile Y21 extrachromosomal linear Cluster_84 Clostridia_gi_545030618 hallmark;refseq 28;27;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile Y21 extrachromosomal linear Cluster_67 Clostridia_gi_545030656 hallmark;refseq 60;33;5;22 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile Y41 extrachromosomal linear Cluster_34 Clostridia_gi_545030666 hallmark;refseq 54;49;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile Y41 extrachromosomal linear Cluster_129 Clostridia_gi_545030798-10084-55949 hallmark;refseq 56;40;3;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile Y155 prophage linear Cluster_15 Clostridia_gi_545030831 refseq 9;6;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile Y155 extrachromosomal linear Cluster_152 Clostridia_gi_545031373 hallmark;refseq 32;25;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile Y165 extrachromosomal linear Cluster_104 Clostridia_gi_545031386 hallmark;refseq 20;19;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile Y165 extrachromosomal linear Cluster_287 Clostridia_gi_545031787 hallmark;refseq 14;8;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile Y165 extrachromosomal linear Cluster_111 Clostridia_gi_545032236 refseq 18;10;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile Y171 extrachromosomal linear Cluster_309 Clostridia_gi_545032314 hallmark;refseq 35;25;2;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile Y171 extrachromosomal linear Cluster_74 Clostridia_gi_545032423 hallmark;refseq 16;15;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile Y184 extrachromosomal linear Cluster_67 Clostridia_gi_545032678 hallmark;refseq 17;16;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile Y184 extrachromosomal linear Cluster_15 Clostridia_gi_545032679 hallmark;refseq 19;18;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile Y184 extrachromosomal linear Cluster_99 Clostridia_gi_545032829 refseq 17;10;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile Y184 extrachromosomal linear Cluster_511 Clostridia_gi_545033788 refseq 18;16;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile Y202 extrachromosomal linear Cluster_99 Clostridia_gi_545034029 hallmark;refseq 17;16;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile Y202 extrachromosomal linear Cluster_15 Clostridia_gi_545034157 refseq 25;12;2;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile Y202 extrachromosomal linear Cluster_84 Clostridia_gi_545034193 hallmark;refseq 28;24;;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile Y202 extrachromosomal linear Cluster_95 Clostridia_gi_545034271-47463-98238 hallmark;refseq 67;50;1;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile Y215 prophage linear Cluster_15 Clostridia_gi_545034421 refseq;vdb 26;15;4;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile Y231 extrachromosomal linear Cluster_111 Clostridia_gi_545034554-49445-78215 hallmark;refseq 53;48;;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile Y247 prophage linear Cluster_15 Clostridia_gi_545035115 hallmark;refseq 22;13;1;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile Y270 extrachromosomal linear Cluster_15 Clostridia_gi_545035444 hallmark;refseq 15;11;;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile Y307 extrachromosomal linear Cluster_111 Clostridia_gi_545035491 refseq 25;13;8;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile Y307 extrachromosomal linear Cluster_152 Clostridia_gi_545036060 hallmark;refseq 62;38;4;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile Y312 extrachromosomal linear Cluster_34 Clostridia_gi_545036069 hallmark;refseq 56;50;1;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile Y312 extrachromosomal linear Cluster_129 Clostridia_gi_545036925-220-51237 hallmark;refseq 79;63;4;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile Y358 prophage linear Cluster_15 Clostridia_gi_545037117 hallmark;refseq 44;41;;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile Y381 extrachromosomal linear Cluster_77 Clostridia_gi_545037317 hallmark;refseq 35;16;5;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Punalikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile Y384 extrachromosomal linear Cluster_250 Clostridia_gi_545037542-3677-36763 hallmark;refseq 52;29;6;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile Y384 prophage linear Cluster_119 Clostridia_gi_545037736 hallmark;refseq 16;14;1;1 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile Y384 extrachromosomal linear Cluster_145 Clostridia_gi_545037866 refseq 13;7;1;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile Y384 extrachromosomal linear Cluster_15 Clostridia_gi_545037962-8039-50929 hallmark;refseq 75;58;2;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile Y384 prophage linear Cluster_251 Clostridia_gi_545038083 hallmark;refseq 18;16;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile Y384 extrachromosomal linear Cluster_15 Clostridia_gi_545038142 hallmark;refseq 77;45;5;27 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile Y384 extrachromosomal linear Cluster_34 Clostridia_gi_545039121 hallmark;refseq 84;58;1;25 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile Y401 extrachromosomal circular Cluster_67 Clostridia_gi_545039456 hallmark;refseq 51;50;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Phic3unalikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile P1 extrachromosomal circular Cluster_77 Clostridia_gi_545040034 refseq;vdb 40;27;9;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile P3 extrachromosomal linear Cluster_111 Clostridia_gi_545040419 hallmark;refseq 28;28;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile P5 extrachromosomal linear Cluster_67 Clostridia_gi_545040821 hallmark;refseq 41;24;2;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile P6 extrachromosomal linear Cluster_193 Clostridia_gi_545040827 hallmark;refseq 12;8;1;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile P6 extrachromosomal linear Cluster_111 Clostridia_gi_545040838 hallmark;refseq 55;52;;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Phic3unalikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile P6 extrachromosomal linear Cluster_77 Clostridia_gi_545040870 hallmark;refseq 74;45;5;24 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile P6 extrachromosomal linear Cluster_34 Clostridia_gi_545041330 hallmark;refseq 22;18;;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile P7 extrachromosomal linear Cluster_15 Clostridia_gi_545041455 refseq 11;6;5; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile P7 extrachromosomal linear Cluster_99 Clostridia_gi_545041686 hallmark;refseq 25;21;1;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile P7 extrachromosomal linear Cluster_15 Clostridia_gi_545041815 hallmark;refseq 37;37;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Phic3unalikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile P7 extrachromosomal linear Cluster_77 Clostridia_gi_545042015 refseq 28;21;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile P8 extrachromosomal linear Cluster_397 Clostridia_gi_545042017 refseq 24;20;;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile P8 extrachromosomal linear Cluster_74 Clostridia_gi_545042021 hallmark;refseq 36;33;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile P8 extrachromosomal linear Cluster_15 Clostridia_gi_545042081 hallmark;refseq 36;27;2;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile P8 extrachromosomal linear Cluster_95 Clostridia_gi_545042574-12492-45139 hallmark;refseq 45;33;1;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile P9 prophage linear Cluster_15 Clostridia_gi_545042990 hallmark;refseq 29;18;6;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile P11 extrachromosomal linear Cluster_99 Clostridia_gi_545043069-10111-42759 hallmark;refseq 44;32;1;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile P11 prophage linear Cluster_15 Clostridia_gi_545043286 refseq 16;8;2;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile P11 extrachromosomal linear unclustered Clostridia_gi_545043425-97642-136219 hallmark;refseq 60;44;3;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile P13 prophage linear Cluster_74 Clostridia_gi_545043553-176308-217460 hallmark;refseq 52;41;1;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile P13 prophage linear Cluster_15 Clostridia_gi_545043568 refseq 25;16;5;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile P13 extrachromosomal linear Cluster_99 Clostridia_gi_545043797 hallmark;refseq 90;47;9;34 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile P15 extrachromosomal linear Cluster_34 Clostridia_gi_545043968 hallmark;refseq 14;12;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile P19 extrachromosomal linear Cluster_99 Clostridia_gi_545044227 refseq 16;8;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile P20 extrachromosomal linear Cluster_478 Clostridia_gi_545044439 hallmark;refseq 39;32;2;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile P21 extrachromosomal linear Cluster_15 Clostridia_gi_545044514 hallmark;refseq 29;28;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile P21 extrachromosomal linear Cluster_67 Clostridia_gi_545044593 hallmark 20;5;4;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile P23 extrachromosomal linear Cluster_167 Clostridia_gi_545044880 hallmark;refseq 56;43;2;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile P24 extrachromosomal linear Cluster_15 Clostridia_gi_545044940 hallmark;refseq 41;33;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile P24 extrachromosomal linear Cluster_67 Clostridia_gi_545045010-49019-94601 hallmark;refseq 79;60;2;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile P25 prophage linear Cluster_15 Clostridia_gi_545045045 hallmark;refseq 33;29;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile P25 extrachromosomal linear Cluster_67 Clostridia_gi_545047080-76197-107291 hallmark;refseq 52;37;4;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile P29 prophage linear Cluster_84 Clostridia_gi_545047774 hallmark;refseq 18;14;;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile P30 extrachromosomal linear Cluster_99 Clostridia_gi_545047928-47470-79268 hallmark;refseq 50;34;4;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile P30 prophage linear Cluster_84 Clostridia_gi_545048494 hallmark;vdb 21;5;6;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile P31 extrachromosomal linear Cluster_167 Clostridia_gi_545049023 hallmark;refseq 30;21;1;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile P38 extrachromosomal linear Cluster_15 Clostridia_gi_545049030 hallmark;refseq 18;12;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile P38 extrachromosomal linear Cluster_478 Clostridia_gi_545049359 hallmark;refseq 35;33;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile P38 extrachromosomal linear Cluster_67 Clostridia_gi_545049577 hallmark;refseq 59;34;4;21 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile P36 extrachromosomal linear Cluster_34 Clostridia_gi_545049814 hallmark;refseq 40;26;3;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile P42 extrachromosomal linear Cluster_84 Clostridia_gi_545050016 hallmark 22;5;5;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile P45 extrachromosomal circular Cluster_167 Clostridia_gi_545050181 hallmark;refseq 22;14;1;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile P46 extrachromosomal linear Cluster_15 Clostridia_gi_545050221 hallmark;refseq 42;40;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile P46 extrachromosomal linear Cluster_67 Clostridia_gi_545050231 hallmark 25;12;3;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile P46 extrachromosomal linear Cluster_406 Clostridia_gi_545050421 hallmark;refseq 26;16;1;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile P48 extrachromosomal linear Cluster_15 Clostridia_gi_545050438 hallmark;refseq 30;30;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile P48 extrachromosomal linear Cluster_67 Clostridia_gi_545050474 hallmark;refseq 44;35;3;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile P48 extrachromosomal linear Cluster_34 Clostridia_gi_545050663 hallmark;refseq 49;48;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Phic3unalikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile P48 extrachromosomal linear Cluster_77 Clostridia_gi_545051108 hallmark;refseq 51;50;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Phic3unalikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile P49 extrachromosomal circular Cluster_77 Clostridia_gi_545051162 hallmark;refseq 33;25;1;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile P50 extrachromosomal linear Cluster_15 Clostridia_gi_545051170 hallmark;refseq 31;23;1;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile P50 extrachromosomal linear Cluster_99 Clostridia_gi_545051184-570387-600909 hallmark;refseq 45;29;1;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile P50 prophage linear Cluster_15 Clostridia_gi_545051224 hallmark;refseq 22;19;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile P50 extrachromosomal linear Cluster_99 Clostridia_gi_545051677-47472-91850 hallmark;refseq 54;39;4;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile P51 prophage linear Cluster_15 Clostridia_gi_545052078 hallmark;refseq 13;12;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile P51 extrachromosomal linear Cluster_95 Clostridia_gi_545052176 hallmark 23;5;6;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile P59 extrachromosomal linear Cluster_167 Clostridia_gi_545052260-0-34729 hallmark;refseq 50;39;2;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile P59 prophage linear Cluster_95 Clostridia_gi_545052424 hallmark;refseq 46;35;1;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile P59 extrachromosomal linear Cluster_15 Clostridia_gi_545053316-232170-263640 hallmark;refseq 41;29;4;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile P61 prophage linear Cluster_15 Clostridia_gi_545053425-49685-72529 hallmark;refseq 44;37;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile P78 prophage linear Cluster_74 Clostridia_gi_545053493 hallmark;refseq 66;37;5;24 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile P69 extrachromosomal linear Cluster_34 Clostridia_gi_545053530 hallmark;refseq 43;40;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile P69 extrachromosomal linear Cluster_15 Clostridia_gi_545053569 hallmark;refseq 36;28;2;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile P69 extrachromosomal linear Cluster_95 Clostridia_gi_545053673 hallmark 24;11;3;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile P70 extrachromosomal linear Cluster_406 Clostridia_gi_545053716 refseq 16;9;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile P70 extrachromosomal linear Cluster_111 Clostridia_gi_545053990 hallmark;refseq 75;47;4;24 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile P71 extrachromosomal linear Cluster_34 Clostridia_gi_545054069 hallmark;refseq 20;12;4;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile P71 extrachromosomal linear Cluster_309 Clostridia_gi_545054205 hallmark;refseq 42;33;6;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile P73 extrachromosomal linear Cluster_15 Clostridia_gi_545054279 hallmark;refseq 64;36;5;23 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile P74 extrachromosomal linear Cluster_34 Clostridia_gi_545054357-103769-155846 hallmark;refseq 67;53;2;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile P74 prophage linear Cluster_99 Clostridia_gi_545054500 hallmark 19;9;2;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile P75 extrachromosomal linear Cluster_406 Clostridia_gi_545054517-0-10960 hallmark;refseq 17;17;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile P75 prophage linear Cluster_99 Clostridia_gi_545054567 hallmark;refseq 20;11;1;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile P75 extrachromosomal linear Cluster_15 Clostridia_gi_545054674 hallmark 17;9;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile P77 extrachromosomal linear Cluster_339 Clostridia_gi_545054676 hallmark;refseq 17;16;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile P77 extrachromosomal linear Cluster_287 Clostridia_gi_545061504 hallmark;refseq 96;29;10;57 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium bifermentans ATCC 638 extrachromosomal linear Cluster_34 Clostridia_gi_545061581 refseq 38;24;1;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile F200 extrachromosomal linear Cluster_74 Clostridia_gi_545061585 hallmark;refseq 19;9;2;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile F200 extrachromosomal linear Cluster_15 Clostridia_gi_545061697 refseq 27;15;2;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile F200 extrachromosomal linear Cluster_84 Clostridia_gi_545061915 hallmark;refseq 29;23;1;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile F525 extrachromosomal linear Cluster_74 Clostridia_gi_545061917 hallmark;refseq 29;18;2;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile F525 extrachromosomal linear Cluster_84 Clostridia_gi_545062049-522710-561922 hallmark;refseq 61;48;3;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile F548 prophage linear Cluster_84 Clostridia_gi_545062109 hallmark;refseq 63;59;;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile F548 extrachromosomal linear Cluster_34 Clostridia_gi_545062118-0-31923 hallmark;refseq 48;35;2;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile F548 prophage linear Cluster_15 Clostridia_gi_545062157-0-22732 hallmark;refseq;vdb 35;23;5;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile F548 prophage linear Cluster_74 Clostridia_gi_545390150 hallmark;refseq 33;11;6;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium sp. ATCC BAA-442 extrachromosomal linear Cluster_15 Clostridia_gi_545391396 hallmark 23;4;1;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium sp. ATCC BAA-442 extrachromosomal linear unclustered Clostridia_gi_545401873 hallmark 72;19;10;43 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium symbiosum ATCC 14940 extrachromosomal linear Cluster_48 Clostridia_gi_545413440 hallmark 80;21;18;41 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Lachnospiraceae;Blautia Blautia sp. KLE 1732 extrachromosomal linear Cluster_310 Clostridia_gi_545420585 refseq;vdb 13;3;2;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium sp. ATCC 29733 extrachromosomal circular unclustered Clostridia_gi_545422032 hallmark;refseq 33;15;3;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium sp. ATCC 29733 extrachromosomal linear Cluster_243 Clostridia_gi_545443780 hallmark 34;12;12;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Ruminococcaceae;Ruminococcus Ruminococcus callidus ATCC 27760 extrachromosomal linear Cluster_42 Clostridia_gi_545444197 hallmark 58;15;14;29 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Ruminococcaceae;Ruminococcus Ruminococcus callidus ATCC 27760 extrachromosomal linear Cluster_42 Clostridia_gi_545445993 hallmark;refseq 18;9;2;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Ruminococcaceae;Ruminococcus Ruminococcus callidus ATCC 27760 extrachromosomal linear Cluster_20 Clostridia_gi_545624061 hallmark;refseq 118;37;6;75 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Oscillospiraceae;Oscillibacter Oscillibacter sp. KLE 1728 extrachromosomal linear Cluster_495 Clostridia_gi_545639314-6496-63820 hallmark;refseq 83;24;10;49 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Oscillospiraceae;Oscillibacter Oscillibacter sp. KLE 1728 prophage linear Cluster_355 Clostridia_gi_545639651 hallmark 11;3;;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Oscillospiraceae;Oscillibacter Oscillibacter sp. KLE 1728 extrachromosomal linear Cluster_580 Clostridia_gi_545643690 hallmark 9;3;;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Oscillospiraceae;Oscillibacter Oscillibacter sp. KLE 1745 extrachromosomal circular Cluster_580 Clostridia_gi_545644210-13585-64916 hallmark;refseq 75;24;6;45 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Oscillospiraceae;Oscillibacter Oscillibacter sp. KLE 1745 prophage linear Cluster_355 Clostridia_gi_545644394 refseq;vdb 14;3;3;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Firmicutes;Clostridia;Clostridiales;Oscillospiraceae;Oscillibacter Oscillibacter sp. KLE 1745 extrachromosomal linear unclustered Clostridia_gi_546162569-1631445-1676706 hallmark;refseq;vdb 66;37;4;25 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium intestinale URNW prophage linear Cluster_50 Clostridia_gi_546477851 hallmark 34;13;7;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium sp. CAG:7 extrachromosomal linear Cluster_42 Clostridia_gi_546486044-95813-139509 hallmark;refseq;vdb 61;18;11;32 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium sp. CAG:7 prophage linear Cluster_452 Clostridia_gi_546486246 hallmark;refseq;vdb 52;17;20;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium sp. CAG:7 extrachromosomal linear Cluster_20 Clostridia_gi_546697520 hallmark 19;8;2;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium sp. CAG:590 extrachromosomal linear Cluster_295 Clostridia_gi_546932691 hallmark 19;3;;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Yualikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium sp. CAG:81 extrachromosomal linear Cluster_244 Clostridia_gi_546938241-31377-54043 hallmark;refseq;vdb 34;18;4;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium sp. CAG:81 prophage linear Cluster_426 Clostridia_gi_546939731-162301-174407 hallmark;refseq;vdb 15;7;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium sp. CAG:81 prophage linear Cluster_126 Clostridia_gi_547022485 refseq;vdb 19;5;6;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Eubacteriaceae;Eubacterium Eubacterium sp. CAG:786 extrachromosomal linear Cluster_309 Clostridia_gi_547024125 hallmark;refseq 52;25;8;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Eubacteriaceae;Eubacterium Eubacterium sp. CAG:786 extrachromosomal linear Cluster_15 Clostridia_gi_547036646-0-18161 hallmark 29;10;6;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Eubacteriaceae;Eubacterium Eubacterium sp. CAG:786 prophage linear Cluster_42 Clostridia_gi_547193171 hallmark;refseq;vdb 18;9;4;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;Peptostreptococcus Peptostreptococcus anaerobius CAG:621 extrachromosomal linear Cluster_17 Clostridia_gi_547209477-0-28549 hallmark;refseq;vdb 40;22;4;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium sp. CAG:678 prophage linear Cluster_197 Clostridia_gi_547240599 hallmark;refseq 98;24;15;59 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Ruminococcaceae;Ruminococcus Ruminococcus sp. CAG:17 extrachromosomal linear Cluster_226 Clostridia_gi_547268948 hallmark;refseq;vdb 46;15;21;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Ruminococcaceae;Ruminococcus Ruminococcus torques CAG:61 extrachromosomal linear Cluster_20 Clostridia_gi_547303947 refseq;vdb 24;9;3;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Spbetalikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Lachnospiraceae;Roseburia Roseburia sp. CAG:50 extrachromosomal linear Cluster_227 Clostridia_gi_547698226 hallmark;refseq 33;18;5;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Ruminococcaceae;Ruminococcus Ruminococcus sp. CAG:579 extrachromosomal linear Cluster_42 Clostridia_gi_547704552 hallmark 11;1;1;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Ruminococcaceae;Ruminococcus Ruminococcus sp. CAG:579 extrachromosomal linear Cluster_368 Clostridia_gi_547728748 hallmark;refseq 47;21;10;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Ruminococcaceae;Ruminococcus Ruminococcus sp. CAG:563 extrachromosomal linear Cluster_77 Clostridia_gi_547729035 hallmark;refseq 22;11;2;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Ruminococcaceae;Ruminococcus Ruminococcus sp. CAG:563 extrachromosomal linear Cluster_243 Clostridia_gi_547737408 hallmark;refseq 27;10;3;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Lachnospiraceae;unknown Lachnospiraceae bacterium CAG:215 extrachromosomal linear Cluster_77 Clostridia_gi_547755088 hallmark;refseq 76;25;11;40 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium sp. CAG:221 extrachromosomal linear Cluster_32 Clostridia_gi_547759895 hallmark;refseq 60;19;9;32 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Lachnospiraceae;Blautia Blautia sp. CAG:52 extrachromosomal linear Cluster_57 Clostridia_gi_547762165 hallmark 20;8;4;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium sp. CAG:557 extrachromosomal linear Cluster_161 Clostridia_gi_547766152-28262-59617 hallmark;refseq;vdb 41;16;5;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Oscillospiraceae;Oscillibacter Oscillibacter sp. CAG:241 prophage linear Cluster_76 Clostridia_gi_547777052 hallmark;vdb 14;5;2;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Ruminococcaceae;Ruminococcus Ruminococcus sp. CAG:177 extrachromosomal linear Cluster_50 Clostridia_gi_547782873 hallmark 37;7;7;23 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium sp. CAG:217 extrachromosomal linear Cluster_50 Clostridia_gi_547783687 hallmark 40;10;2;28 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium sp. CAG:217 extrachromosomal linear Cluster_244 Clostridia_gi_547790224 refseq;vdb 21;7;2;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium clostridioforme CAG:132 extrachromosomal linear Cluster_255 Clostridia_gi_547805222 hallmark;refseq 52;18;9;25 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Lachnospiraceae;Blautia Blautia sp. CAG:237 extrachromosomal linear Cluster_295 Clostridia_gi_547807793-174268-205484 hallmark;vdb 46;19;5;22 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Firmicutes;Clostridia;Clostridiales;Lachnospiraceae;Coprococcus Coprococcus sp. CAG:131 prophage linear Cluster_17 Clostridia_gi_547826598 hallmark;refseq 32;11;6;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Eubacteriaceae;Eubacterium Eubacterium sp. CAG:202 extrachromosomal linear Cluster_243 Clostridia_gi_547826624 refseq 30;8;9;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Eubacteriaceae;Eubacterium Eubacterium sp. CAG:202 extrachromosomal linear Cluster_20 Clostridia_gi_547828470 hallmark;refseq 21;12;;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium leptum CAG:27 extrachromosomal linear Cluster_77 Clostridia_gi_547831345-16388-52509 hallmark;vdb 52;19;6;27 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Lachnospiraceae;unknown Lachnospiraceae bacterium CAG:364 prophage linear Cluster_227 Clostridia_gi_547833238 hallmark;refseq 57;22;9;26 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium sp. CAG:413 extrachromosomal linear Cluster_533 Clostridia_gi_547839317-8231-13520 hallmark;noncaudo 9;3;;6 Viruses;ssDNA viruses;unknown;Microviridae;Chlamydiamicrovirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium sp. CAG:306 prophage linear Cluster_140 Clostridia_gi_547839746 hallmark;refseq 47;21;7;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium sp. CAG:306 extrachromosomal linear Cluster_21 Clostridia_gi_547840376 hallmark;refseq 19;12;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Eubacteriaceae;Eubacterium Eubacterium sp. CAG:274 extrachromosomal linear Cluster_15 Clostridia_gi_547850312 hallmark;refseq 107;28;17;62 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Punalikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Ruminococcaceae;Faecalibacterium Faecalibacterium sp. CAG:82 extrachromosomal linear Cluster_533 Clostridia_gi_547852287-44804-82676 hallmark;vdb 37;12;4;21 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Firmicutes;Clostridia;Clostridiales;Eubacteriaceae;Eubacterium Eubacterium sp. CAG:251 prophage linear Cluster_244 Clostridia_gi_547857777 hallmark 55;16;22;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium sp. CAG:352 extrachromosomal linear Cluster_243 Clostridia_gi_547865431-14344-24739 hallmark;vdb 13;4;;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Yualikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Eubacteriaceae;Eubacterium Eubacterium siraeum CAG:80 prophage linear Cluster_244 Clostridia_gi_547865548 hallmark 50;15;16;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Eubacteriaceae;Eubacterium Eubacterium siraeum CAG:80 extrachromosomal linear Cluster_42 Clostridia_gi_547865888 hallmark 64;14;4;46 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium sp. CAG:58 extrachromosomal linear Cluster_295 Clostridia_gi_547868097 hallmark 66;22;16;28 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium sp. CAG:58 extrachromosomal linear Cluster_15 Clostridia_gi_547873663-11997-37723 hallmark;refseq;vdb 41;20;3;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Lachnospiraceae;Dorea Dorea formicigenerans CAG:28 prophage linear Cluster_57 Clostridia_gi_547873860 hallmark 32;10;6;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Lachnospiraceae;Dorea Dorea formicigenerans CAG:28 extrachromosomal linear Cluster_426 Clostridia_gi_547882765 hallmark;refseq 20;10;1;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Ruminococcaceae;Ruminococcus Ruminococcus sp. CAG:57 extrachromosomal linear Cluster_452 Clostridia_gi_547884111 hallmark;vdb 42;5;17;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Oscillospiraceae;Oscillibacter Oscillibacter sp. CAG:155 extrachromosomal linear Cluster_368 Clostridia_gi_547888572-0-42670 hallmark 56;10;11;35 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Eubacteriaceae;Eubacterium Eubacterium rectale CAG:36 prophage linear Cluster_236 Clostridia_gi_547902707-39831-65925 refseq;vdb 42;15;5;22 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Lachnospiraceae;Roseburia Roseburia sp. CAG:380 prophage linear Cluster_255 Clostridia_gi_547942827 hallmark;refseq 17;8;2;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium sp. CAG:356 extrachromosomal linear Cluster_141 Clostridia_gi_547958683 hallmark 23;8;2;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Yualikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium sp. CAG:43 extrachromosomal linear Cluster_244 Clostridia_gi_547965261-11334-26222 hallmark;refseq 23;13;3;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium sp. CAG:505 prophage linear Cluster_480 Clostridia_gi_548093166 refseq 83;33;7;43 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Ruminococcaceae;Ruminococcus Ruminococcus sp. CAG:9 extrachromosomal linear Cluster_89 Clostridia_gi_548188892 hallmark 31;10;4;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Ruminococcaceae;Ruminococcus Ruminococcus sp. CAG:330 extrachromosomal linear Cluster_34 Clostridia_gi_548189486 hallmark 15;6;1;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Phic3unalikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Ruminococcaceae;Ruminococcus Ruminococcus sp. CAG:330 extrachromosomal linear Cluster_227 Clostridia_gi_548190329 hallmark 72;21;12;39 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Spbetalikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Ruminococcaceae;Ruminococcus Ruminococcus sp. CAG:330 extrachromosomal linear Cluster_375 Clostridia_gi_548199516 hallmark 22;4;4;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Eubacteriaceae;Eubacterium Eubacterium dolichum CAG:375 extrachromosomal linear unclustered Clostridia_gi_548207151-77995-115863 hallmark;refseq;vdb 43;22;7;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Ruminococcaceae;Ruminococcus Ruminococcus sp. CAG:90 prophage linear Cluster_408 Clostridia_gi_548208456 hallmark;refseq 31;16;9;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Ruminococcaceae;Ruminococcus Ruminococcus sp. CAG:403 extrachromosomal linear Cluster_20 Clostridia_gi_548208793 hallmark;refseq 66;30;11;25 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Ruminococcaceae;Ruminococcus Ruminococcus sp. CAG:403 extrachromosomal linear Cluster_15 Clostridia_gi_548232719 hallmark 75;17;6;52 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium sp. CAG:269 extrachromosomal circular Cluster_251 Clostridia_gi_548245767 hallmark;refseq 43;17;6;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium sp. CAG:277 extrachromosomal linear Cluster_134 Clostridia_gi_548246196 refseq;vdb 90;12;32;46 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium sp. CAG:277 extrachromosomal linear Cluster_310 Clostridia_gi_548299989 hallmark;refseq 44;18;8;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium sp. CAG:813 extrachromosomal linear Cluster_21 Clostridia_gi_550101870 hallmark;refseq 33;26;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile DA00130 extrachromosomal linear Cluster_15 Clostridia_gi_550101917 hallmark;refseq 13;11;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile DA00130 extrachromosomal linear Cluster_111 Clostridia_gi_550104912 hallmark;refseq 26;26;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile DA00130 extrachromosomal linear Cluster_104 Clostridia_gi_550109407 hallmark;refseq 35;34;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile P33 extrachromosomal linear Cluster_15 Clostridia_gi_550113142 hallmark;refseq 32;31;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile P33 extrachromosomal linear Cluster_67 Clostridia_gi_550114834 hallmark;refseq 16;9;2;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile P41 extrachromosomal linear Cluster_84 Clostridia_gi_550116859 hallmark 13;7;1;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile P41 extrachromosomal linear Cluster_15 Clostridia_gi_550121985 hallmark;refseq 41;38;;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile P37 extrachromosomal linear Cluster_67 Clostridia_gi_550124733 hallmark;refseq 26;19;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile P64 extrachromosomal linear Cluster_67 Clostridia_gi_550125691 hallmark;refseq 16;10;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile P64 extrachromosomal linear Cluster_15 Clostridia_gi_550130037-95265-133929 hallmark;refseq 61;45;3;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile P68 prophage linear Cluster_74 Clostridia_gi_550130350 hallmark;refseq 51;38;2;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile P68 extrachromosomal linear Cluster_15 Clostridia_gi_550135422-47288-69589 hallmark;refseq 27;19;1;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile F665 prophage linear Cluster_15 Clostridia_gi_550140903 hallmark;refseq 13;11;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile F665 extrachromosomal linear Cluster_99 Clostridia_gi_550143617 hallmark;refseq 41;22;3;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile P53 extrachromosomal linear Cluster_424 Clostridia_gi_550476923 hallmark;refseq 26;17;1;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile E10 extrachromosomal linear Cluster_15 Clostridia_gi_550502754 hallmark;refseq 21;16;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;unknown Clostridium difficile E10 extrachromosomal linear Cluster_34 Clostridia_gi_551043246 hallmark;refseq 37;12;11;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;unknown;unknown Clostridiales bacterium NK3B98 extrachromosomal linear Cluster_20 Clostridia_gi_551720650-456133-502893 hallmark;refseq;vdb 71;18;15;38 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Ruminococcaceae;unknown Ruminococcaceae bacterium D16 prophage linear Cluster_236 Clostridia_gi_553309842-50785-87214 hallmark;refseq;vdb 58;25;10;23 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiales Family XI. Incertae Sedis;unknown Clostridiales bacterium BV3C26 prophage linear Cluster_29 Clostridia_gi_553310853 hallmark;refseq 42;27;3;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiales Family XI. Incertae Sedis;unknown Clostridiales bacterium BV3C26 extrachromosomal linear Cluster_76 Clostridia_gi_553726179 hallmark;vdb 40;9;21;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium thermocellum BC1 extrachromosomal linear Cluster_42 Clostridia_gi_557507028 hallmark;vdb 18;5;7;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium sp. CAG:226 extrachromosomal linear Cluster_72 Clostridia_gi_564826236 hallmark;refseq 38;15;7;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Youngiibacter Youngiibacter fragilis 232.1 extrachromosomal linear Cluster_20 Clostridia_gi_565896634 hallmark;refseq 44;23;9;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium pasteurianum NRRL B-598 extrachromosomal linear Cluster_95 Cyanobacteria_gi_292905252 hallmark 51;4;5;42 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Cyanobacteria;unknown;Nostocales;Nostocaceae;Anabaena Anabaena variabilis ATCC 29413 extrachromosomal linear unclustered Cyanobacteria_gi_416410336 hallmark;vdb 22;2;;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Cyanobacteria;unknown;Chroococcales;unknown;Crocosphaera Crocosphaera watsonii WH 0003 extrachromosomal linear Cluster_545 Cyanobacteria_gi_427415018 hallmark 78;19;9;50 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Cyanobacteria;unknown;Oscillatoriales;unknown;Leptolyngbya Leptolyngbya sp. PCC 7375 extrachromosomal linear Cluster_89 Cyanobacteria_gi_427740400 hallmark 27;1;1;25 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;T4likevirus;unknown Bacteria;Cyanobacteria;unknown;Nostocales;Rivulariaceae;Rivularia Rivularia sp. PCC 7116 extrachromosomal linear unclustered Cyanobacteria_gi_443328673 hallmark 107;22;10;75 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Cyanobacteria;unknown;Pleurocapsales;unknown;Xenococcus Xenococcus sp. PCC 7305 extrachromosomal circular Cluster_89 Cyanobacteria_gi_472317756 hallmark;refseq 5;4;;1 Viruses;ssDNA viruses;unknown;Microviridae;Chlamydiamicrovirus;unknown Bacteria;Cyanobacteria;unknown;Nostocales;Nostocaceae;Richelia Richelia intracellularis HH01 extrachromosomal linear Cluster_140 Cyanobacteria_gi_546223575 hallmark;vdb 19;2;;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Cyanobacteria;unknown;Chroococcales;unknown;Crocosphaera Crocosphaera watsonii WH 0005 extrachromosomal linear Cluster_545 Cyanobacteria_gi_553737699 hallmark 33;5;6;22 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Cyanobacteria;unknown;Oscillatoriales;unknown;Leptolyngbya Leptolyngbya sp. Heron Island J extrachromosomal linear Cluster_561 Cyanobacteria_gi_553739909 hallmark 37;5;6;26 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unclassified Bacteria;Cyanobacteria;unknown;Oscillatoriales;unknown;Leptolyngbya Leptolyngbya sp. Heron Island J extrachromosomal linear unclustered Cytophagia_gi_124008650-8550-74489 hallmark 59;4;12;43 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Bacteroidetes;Cytophagia;Cytophagales;Cytophagaceae;Microscilla Microscilla marina ATCC 23134 prophage linear Cluster_38 Cytophagia_gi_441500421 hallmark 47;10;4;33 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Bacteroidetes;Cytophagia;Cytophagales;Flammeovirgaceae;Fulvivirga Fulvivirga imtechensis AK7 extrachromosomal linear Cluster_113 Cytophagia_gi_483993778-985-68901 hallmark;refseq 83;22;5;56 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Bacteroidetes;Cytophagia;Cytophagales;Cytophagaceae;Spirosoma Spirosoma spitsbergense DSM 19989 prophage linear Cluster_330 Cytophagia_gi_484106105 hallmark 55;8;10;37 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Bacteroidetes;Cytophagia;Cytophagales;Flammeovirgaceae;Nafulsella Nafulsella turpanensis ZLM-10 extrachromosomal linear Cluster_4 Deinococci_gi_484153811 hallmark 99;15;14;70 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Deinococcus-Thermus;Deinococci;Deinococcales;Deinococcaceae;Deinococcus Deinococcus wulumuqiensis R12 extrachromosomal linear Cluster_310 Deinococci_gi_484153907 hallmark 83;9;7;67 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Deinococcus-Thermus;Deinococci;Deinococcales;Deinococcaceae;Deinococcus Deinococcus wulumuqiensis R12 extrachromosomal linear unclustered Deinococci_gi_484154262 refseq 8;4;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Deinococcus-Thermus;Deinococci;Deinococcales;Deinococcaceae;Deinococcus Deinococcus wulumuqiensis R12 extrachromosomal linear unclustered Deltaproteobacteria_gi_115375882 hallmark 52;10;14;28 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Deltaproteobacteria;Myxococcales;Cystobacteraceae;Stigmatella Stigmatella aurantiaca DW4/3-1 extrachromosomal linear Cluster_190 Deltaproteobacteria_gi_115379459 hallmark 17;4;3;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Deltaproteobacteria;Myxococcales;Cystobacteraceae;Stigmatella Stigmatella aurantiaca DW4/3-1 extrachromosomal linear Cluster_190 Deltaproteobacteria_gi_115379634 hallmark;vdb 15;3;4;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Deltaproteobacteria;Myxococcales;Cystobacteraceae;Stigmatella Stigmatella aurantiaca DW4/3-1 extrachromosomal linear Cluster_190 Deltaproteobacteria_gi_120601051-3198570-3219699 hallmark;refseq 27;16;8;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Deltaproteobacteria;Desulfovibrionales;Desulfovibrionaceae;Desulfovibrio Desulfovibrio vulgaris DP4 prophage linear Cluster_71 Deltaproteobacteria_gi_218885109-862545-900907 hallmark;refseq 47;25;11;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Deltaproteobacteria;Desulfovibrionales;Desulfovibrionaceae;Desulfovibrio Desulfovibrio vulgaris str. 'Miyazaki F' prophage linear Cluster_39 Deltaproteobacteria_gi_224515267 hallmark 49;9;9;31 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Deltaproteobacteria;Desulfovibrionales;Desulfovibrionaceae;Desulfovibrio Desulfovibrio piger ATCC 29098 extrachromosomal linear Cluster_21 Deltaproteobacteria_gi_347731334-0-14771 hallmark;refseq 20;10;2;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Deltaproteobacteria;Desulfovibrionales;Desulfovibrionaceae;Desulfovibrio Desulfovibrio sp. A2 prophage linear Cluster_39 Deltaproteobacteria_gi_347732078 hallmark 54;9;17;28 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Deltaproteobacteria;Desulfovibrionales;Desulfovibrionaceae;Desulfovibrio Desulfovibrio sp. A2 extrachromosomal linear Cluster_21 Deltaproteobacteria_gi_387151873-2802698-2837493 hallmark;refseq 47;23;9;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Deltaproteobacteria;Desulfovibrionales;Desulfovibrionaceae;Desulfovibrio Desulfovibrio vulgaris RCH1 prophage linear Cluster_39 Deltaproteobacteria_gi_46562128-2799566-2834361 hallmark;refseq 47;23;9;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Deltaproteobacteria;Desulfovibrionales;Desulfovibrionaceae;Desulfovibrio Desulfovibrio vulgaris str. Hildenborough prophage linear Cluster_39 Deltaproteobacteria_gi_484120025 hallmark 52;6;9;37 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Deltaproteobacteria;Myxococcales;Myxococcaceae;Myxococcus Myxococcus xanthus DZF1 extrachromosomal linear Cluster_190 Deltaproteobacteria_gi_484120040 hallmark 32;7;5;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Deltaproteobacteria;Myxococcales;Myxococcaceae;Myxococcus Myxococcus xanthus DZF1 extrachromosomal linear Cluster_190 Deltaproteobacteria_gi_484120044 hallmark 31;5;7;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Deltaproteobacteria;Myxococcales;Myxococcaceae;Myxococcus Myxococcus xanthus DZF1 extrachromosomal linear Cluster_190 Deltaproteobacteria_gi_484343931 hallmark 30;5;7;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Deltaproteobacteria;Myxococcales;Myxococcaceae;Myxococcus Myxococcus xanthus DZ2 extrachromosomal linear Cluster_190 Deltaproteobacteria_gi_484343950 hallmark 20;5;1;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Deltaproteobacteria;Myxococcales;Myxococcaceae;Myxococcus Myxococcus xanthus DZ2 extrachromosomal linear Cluster_190 Deltaproteobacteria_gi_486401475 refseq;vdb 15;4;4;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Deltaproteobacteria;Desulfovibrionales;Desulfovibrionaceae;Desulfovibrio Desulfovibrio desulfuricans subsp. aestuarii DSM 17919 = ATCC 29578 extrachromosomal linear Cluster_535 Deltaproteobacteria_gi_486401495 hallmark 12;2;1;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Deltaproteobacteria;Desulfovibrionales;Desulfovibrionaceae;Desulfovibrio Desulfovibrio desulfuricans subsp. aestuarii DSM 17919 = ATCC 29578 extrachromosomal linear Cluster_1 Deltaproteobacteria_gi_486401528 refseq;vdb 15;5;4;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Deltaproteobacteria;Desulfovibrionales;Desulfovibrionaceae;Desulfovibrio Desulfovibrio desulfuricans subsp. aestuarii DSM 17919 = ATCC 29578 extrachromosomal linear Cluster_535 Deltaproteobacteria_gi_486401586 hallmark;refseq 41;16;9;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Deltaproteobacteria;Desulfovibrionales;Desulfovibrionaceae;Desulfovibrio Desulfovibrio desulfuricans subsp. aestuarii DSM 17919 = ATCC 29578 extrachromosomal circular Cluster_71 Deltaproteobacteria_gi_510897572 hallmark;refseq 22;9;8;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Deltaproteobacteria;Desulfovibrionales;Desulfovibrionaceae;Desulfovibrio Desulfovibrio sp. Dsv1 extrachromosomal linear Cluster_3 Deltaproteobacteria_gi_510897575 hallmark 27;9;7;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Deltaproteobacteria;Desulfovibrionales;Desulfovibrionaceae;Desulfovibrio Desulfovibrio sp. Dsv1 extrachromosomal linear Cluster_21 Deltaproteobacteria_gi_544815434 hallmark;vdb 93;20;34;39 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Deltaproteobacteria;Desulfovibrionales;Desulfovibrionaceae;Desulfovibrio Desulfovibrio alkalitolerans DSM 16529 extrachromosomal linear Cluster_190 Deltaproteobacteria_gi_557300723 hallmark 36;7;9;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Deltaproteobacteria;Syntrophobacterales;Syntrophaceae;Smithella Smithella sp. ME-1 extrachromosomal linear Cluster_101 Deltaproteobacteria_gi_557300972 hallmark;refseq 19;9;4;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Deltaproteobacteria;Syntrophobacterales;Syntrophaceae;Smithella Smithella sp. ME-1 extrachromosomal linear Cluster_44 Epsilonproteobacteria_gi_223039718-11852-59952 hallmark 78;18;12;48 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Campylobacteraceae;Campylobacter Campylobacter rectus RM3267 prophage linear Cluster_0 Epsilonproteobacteria_gi_257459268 hallmark 49;12;5;32 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Campylobacteraceae;Campylobacter Campylobacter gracilis RM3268 extrachromosomal linear Cluster_123 Epsilonproteobacteria_gi_317511053 hallmark 28;7;9;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Campylobacteraceae;Campylobacter Campylobacter jejuni subsp. jejuni 305 extrachromosomal linear Cluster_80 Epsilonproteobacteria_gi_385218266-202627-218317 hallmark;refseq 23;23;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Helicobacteraceae;Helicobacter Helicobacter pylori Gambia94/24 prophage linear Cluster_69 Epsilonproteobacteria_gi_385219873-1218025-1246384 hallmark;refseq 32;31;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Helicobacteraceae;Helicobacter Helicobacter pylori India7 prophage linear Cluster_69 Epsilonproteobacteria_gi_386747036-181506-202444 hallmark;refseq 24;18;;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Helicobacteraceae;Helicobacter Helicobacter cetorum MIT 99-5656 prophage linear Cluster_69 Epsilonproteobacteria_gi_395225548 hallmark 38;6;;32 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Helicobacteraceae;Thiovulum Thiovulum sp. ES extrachromosomal linear Cluster_181 Epsilonproteobacteria_gi_402547406-9256-46582 hallmark 49;15;10;24 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Spounalikevirus;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Campylobacteraceae;Campylobacter Campylobacter sp. FOBRC14 prophage linear Cluster_0 Epsilonproteobacteria_gi_416117995 hallmark 22;4;4;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Campylobacteraceae;Campylobacter Campylobacter concisus UNSWCD extrachromosomal linear Cluster_402 Epsilonproteobacteria_gi_419536862 hallmark 13;2;3;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Campylobacteraceae;Campylobacter Campylobacter coli 111-3 extrachromosomal linear Cluster_123 Epsilonproteobacteria_gi_419538725 hallmark 57;9;8;40 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Campylobacteraceae;Campylobacter Campylobacter coli 90-3 extrachromosomal linear Cluster_123 Epsilonproteobacteria_gi_419539196-0-25042 hallmark;vdb 39;12;13;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Campylobacteraceae;Campylobacter Campylobacter coli 90-3 prophage linear Cluster_80 Epsilonproteobacteria_gi_419540124 hallmark 20;2;4;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Campylobacteraceae;Campylobacter Campylobacter coli Z163 extrachromosomal linear Cluster_123 Epsilonproteobacteria_gi_419544126 hallmark 25;9;8;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Campylobacteraceae;Campylobacter Campylobacter coli 2553 extrachromosomal linear Cluster_0 Epsilonproteobacteria_gi_419546469 hallmark 14;2;3;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Campylobacteraceae;Campylobacter Campylobacter coli 2680 extrachromosomal linear Cluster_123 Epsilonproteobacteria_gi_419548953 hallmark 37;11;16;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Campylobacteraceae;Campylobacter Campylobacter coli 2685 extrachromosomal linear Cluster_80 Epsilonproteobacteria_gi_419551133 hallmark 14;1;4;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Campylobacteraceae;Campylobacter Campylobacter coli 2688 extrachromosomal linear Cluster_554 Epsilonproteobacteria_gi_419552098 hallmark 19;2;4;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Campylobacteraceae;Campylobacter Campylobacter coli 2692 extrachromosomal linear Cluster_123 Epsilonproteobacteria_gi_419554787 hallmark 13;1;3;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Campylobacteraceae;Campylobacter Campylobacter coli 2698 extrachromosomal linear Cluster_123 Epsilonproteobacteria_gi_419558938 hallmark 14;1;4;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Campylobacteraceae;Campylobacter Campylobacter coli 80352 extrachromosomal linear Cluster_123 Epsilonproteobacteria_gi_419560207 hallmark 46;14;17;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Campylobacteraceae;Campylobacter Campylobacter coli 86119 extrachromosomal linear Cluster_80 Epsilonproteobacteria_gi_419564360 hallmark 57;18;19;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Campylobacteraceae;Campylobacter Campylobacter coli 1098 extrachromosomal linear Cluster_80 Epsilonproteobacteria_gi_419567532-9762-51807 hallmark 62;19;22;21 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Campylobacteraceae;Campylobacter Campylobacter coli 1417 prophage linear Cluster_80 Epsilonproteobacteria_gi_419568067 hallmark 28;6;6;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Campylobacteraceae;Campylobacter Campylobacter coli 1417 extrachromosomal linear Cluster_327 Epsilonproteobacteria_gi_419577246 hallmark 29;4;7;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Campylobacteraceae;Campylobacter Campylobacter coli 59-2 extrachromosomal linear Cluster_327 Epsilonproteobacteria_gi_419581508 hallmark 53;11;7;35 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Campylobacteraceae;Campylobacter Campylobacter coli 1957 extrachromosomal linear Cluster_327 Epsilonproteobacteria_gi_419587243 hallmark 30;9;11;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Campylobacteraceae;Campylobacter Campylobacter coli 67-8 extrachromosomal linear Cluster_80 Epsilonproteobacteria_gi_419589171 hallmark 42;6;5;31 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Campylobacteraceae;Campylobacter Campylobacter coli 317/04 extrachromosomal linear Cluster_123 Epsilonproteobacteria_gi_419590355 hallmark 40;6;7;27 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Campylobacteraceae;Campylobacter Campylobacter coli 37/05 extrachromosomal linear Cluster_554 Epsilonproteobacteria_gi_419591851 hallmark 49;13;19;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Campylobacteraceae;Campylobacter Campylobacter coli 37/05 extrachromosomal linear Cluster_80 Epsilonproteobacteria_gi_419601196 hallmark 65;15;31;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Campylobacteraceae;Campylobacter Campylobacter coli LMG 23344 extrachromosomal linear Cluster_80 Epsilonproteobacteria_gi_419609244 hallmark 44;13;17;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Campylobacteraceae;Campylobacter Campylobacter coli H6 extrachromosomal linear Cluster_80 Epsilonproteobacteria_gi_419610926-10654-50567 hallmark 62;20;20;22 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Campylobacteraceae;Campylobacter Campylobacter coli H8 prophage linear Cluster_80 Epsilonproteobacteria_gi_419615239 hallmark 15;1;3;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Campylobacteraceae;Campylobacter Campylobacter coli H56 extrachromosomal linear Cluster_123 Epsilonproteobacteria_gi_419616562 hallmark 56;18;18;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Campylobacteraceae;Campylobacter Campylobacter coli Z156 extrachromosomal linear Cluster_80 Epsilonproteobacteria_gi_419617153 hallmark 17;5;4;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Campylobacteraceae;Campylobacter Campylobacter coli Z156 extrachromosomal linear Cluster_327 Epsilonproteobacteria_gi_419617186 hallmark 14;1;3;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Campylobacteraceae;Campylobacter Campylobacter coli Z156 extrachromosomal linear Cluster_123 Epsilonproteobacteria_gi_419620844 hallmark 17;5;6;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Campylobacteraceae;Campylobacter Campylobacter jejuni subsp. jejuni 51494 extrachromosomal linear Cluster_80 Epsilonproteobacteria_gi_419634179 hallmark 21;5;7;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Campylobacteraceae;Campylobacter Campylobacter jejuni subsp. jejuni LMG 23269 extrachromosomal linear Cluster_80 Epsilonproteobacteria_gi_419648075 hallmark 58;19;21;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Campylobacteraceae;Campylobacter Campylobacter jejuni subsp. jejuni LMG 9217 extrachromosomal linear Cluster_80 Epsilonproteobacteria_gi_419649749 hallmark 19;7;7;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Campylobacteraceae;Campylobacter Campylobacter jejuni subsp. jejuni 2008-1025 extrachromosomal linear Cluster_80 Epsilonproteobacteria_gi_419654369 refseq 16;6;5;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Campylobacteraceae;Campylobacter Campylobacter jejuni subsp. jejuni 2008-872 extrachromosomal linear Cluster_605 Epsilonproteobacteria_gi_419655414-20270-48307 hallmark;vdb 44;15;15;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Campylobacteraceae;Campylobacter Campylobacter jejuni subsp. jejuni 2008-988 prophage linear Cluster_80 Epsilonproteobacteria_gi_419656203 hallmark 19;2;5;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Campylobacteraceae;Campylobacter Campylobacter jejuni subsp. jejuni 2008-988 extrachromosomal linear Cluster_123 Epsilonproteobacteria_gi_419659566 hallmark 13;1;1;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Campylobacteraceae;Campylobacter Campylobacter jejuni subsp. jejuni 2008-979 extrachromosomal linear Cluster_327 Epsilonproteobacteria_gi_419659643 hallmark 17;5;5;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Campylobacteraceae;Campylobacter Campylobacter jejuni subsp. jejuni 2008-979 extrachromosomal linear Cluster_80 Epsilonproteobacteria_gi_419665265 refseq 16;6;5;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Campylobacteraceae;Campylobacter Campylobacter jejuni subsp. jejuni 1997-7 extrachromosomal linear Cluster_605 Epsilonproteobacteria_gi_419667534 hallmark 17;5;5;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Campylobacteraceae;Campylobacter Campylobacter jejuni subsp. jejuni 1997-10 extrachromosomal linear Cluster_80 Epsilonproteobacteria_gi_419672067 hallmark 26;4;6;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Campylobacteraceae;Campylobacter Campylobacter jejuni subsp. jejuni 1997-14 extrachromosomal linear Cluster_278 Epsilonproteobacteria_gi_419673829 hallmark 37;6;8;23 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Campylobacteraceae;Campylobacter Campylobacter jejuni subsp. jejuni 51037 extrachromosomal linear Cluster_278 Epsilonproteobacteria_gi_419678729 hallmark 25;4;5;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Campylobacteraceae;Campylobacter Campylobacter jejuni subsp. jejuni 87459 extrachromosomal linear Cluster_278 Epsilonproteobacteria_gi_419683110 hallmark 38;13;14;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Campylobacteraceae;Campylobacter Campylobacter jejuni subsp. jejuni 1213 extrachromosomal linear Cluster_80 Epsilonproteobacteria_gi_419685464 hallmark 23;3;5;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Campylobacteraceae;Campylobacter Campylobacter jejuni subsp. jejuni 1577 extrachromosomal linear Cluster_123 Epsilonproteobacteria_gi_419694535 hallmark 56;17;17;22 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Campylobacteraceae;Campylobacter Campylobacter jejuni subsp. jejuni LMG 9872 extrachromosomal linear Cluster_80 Epsilonproteobacteria_gi_419696591 hallmark 38;13;14;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Campylobacteraceae;Campylobacter Campylobacter jejuni subsp. jejuni LMG 23210 extrachromosomal linear Cluster_80 Epsilonproteobacteria_gi_419698388 hallmark 38;12;13;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Campylobacteraceae;Campylobacter Campylobacter jejuni subsp. jejuni LMG 23211 extrachromosomal linear Cluster_80 Epsilonproteobacteria_gi_420411110 refseq 8;4;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Helicobacteraceae;Helicobacter Helicobacter pylori NQ4200 extrachromosomal linear Cluster_262 Epsilonproteobacteria_gi_420485972-0-21879 hallmark;refseq 26;25;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Helicobacteraceae;Helicobacter Helicobacter pylori Hp P-4 prophage linear Cluster_69 Epsilonproteobacteria_gi_420496638-420714-436329 hallmark;refseq 21;21;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Helicobacteraceae;Helicobacter Helicobacter pylori Hp P-25 prophage linear Cluster_69 Epsilonproteobacteria_gi_420516451-1081-16493 hallmark;refseq 24;24;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Helicobacteraceae;Helicobacter Helicobacter pylori Hp P-4c prophage linear Cluster_69 Epsilonproteobacteria_gi_420518331-0-18610 hallmark;refseq 27;26;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Helicobacteraceae;Helicobacter Helicobacter pylori Hp P-4d prophage linear Cluster_69 Epsilonproteobacteria_gi_420522047-281975-295145 hallmark;refseq 18;17;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Helicobacteraceae;Helicobacter Helicobacter pylori Hp P-11b prophage linear Cluster_69 Epsilonproteobacteria_gi_420527357-77964-93582 hallmark;refseq 23;23;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Helicobacteraceae;Helicobacter Helicobacter pylori Hp P-25c prophage linear Cluster_69 Epsilonproteobacteria_gi_420528833-420846-436464 hallmark;refseq 22;22;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Helicobacteraceae;Helicobacter Helicobacter pylori Hp P-25d prophage linear Cluster_69 Epsilonproteobacteria_gi_424783653 hallmark 69;17;7;45 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Campylobacteraceae;Campylobacter Campylobacter showae CSUNSWCD extrachromosomal circular Cluster_278 Epsilonproteobacteria_gi_459825395 hallmark;refseq 44;21;5;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Campylobacteraceae;Campylobacter Campylobacter showae CC57C extrachromosomal linear Cluster_367 Epsilonproteobacteria_gi_469924712 hallmark;refseq 22;21;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Helicobacteraceae;Helicobacter Helicobacter pylori GAM105Ai extrachromosomal linear Cluster_69 Epsilonproteobacteria_gi_469924743 refseq 11;10;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Helicobacteraceae;Helicobacter Helicobacter pylori GAM105Ai extrachromosomal linear Cluster_239 Epsilonproteobacteria_gi_469925074-73526-89181 hallmark;refseq 22;22;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Helicobacteraceae;Helicobacter Helicobacter pylori GAM120Ai prophage linear Cluster_69 Epsilonproteobacteria_gi_469925846-32242-47813 hallmark;refseq 23;23;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Helicobacteraceae;Helicobacter Helicobacter pylori GAM260Bi prophage linear Cluster_69 Epsilonproteobacteria_gi_469926061 hallmark;refseq 24;22;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Helicobacteraceae;Helicobacter Helicobacter pylori GAM265BSii extrachromosomal linear Cluster_69 Epsilonproteobacteria_gi_469926352 refseq 13;11;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Helicobacteraceae;Helicobacter Helicobacter pylori GAM83Bi extrachromosomal linear Cluster_239 Epsilonproteobacteria_gi_469926393-78207-91228 hallmark;refseq 17;17;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Helicobacteraceae;Helicobacter Helicobacter pylori GAM83Bi prophage linear Cluster_69 Epsilonproteobacteria_gi_469933952-177-15748 hallmark;refseq 23;23;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Helicobacteraceae;Helicobacter Helicobacter pylori HP260Bi prophage linear Cluster_69 Epsilonproteobacteria_gi_470390318-38-15302 hallmark;refseq 22;22;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Helicobacteraceae;Helicobacter Helicobacter pylori GAMchJs136i prophage linear Cluster_69 Epsilonproteobacteria_gi_483977523 hallmark 54;10;11;33 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Campylobacteraceae;Campylobacter Campylobacter jejuni subsp. jejuni RB922 extrachromosomal linear Cluster_278 Epsilonproteobacteria_gi_483977641 hallmark 58;19;21;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Campylobacteraceae;Campylobacter Campylobacter jejuni subsp. jejuni RB922 extrachromosomal linear Cluster_80 Epsilonproteobacteria_gi_483979507 hallmark 32;6;8;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Campylobacteraceae;Campylobacter Campylobacter jejuni subsp. jejuni 04197 extrachromosomal linear Cluster_278 Epsilonproteobacteria_gi_514958906 hallmark 51;16;6;29 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Campylobacteraceae;Campylobacter Campylobacter ureolyticus ACS-301-V-Sch3b extrachromosomal linear Cluster_80 Epsilonproteobacteria_gi_526465356-167943-181665 hallmark;refseq 22;22;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Helicobacteraceae;Helicobacter Helicobacter pylori UM298 prophage linear Cluster_69 Epsilonproteobacteria_gi_529858346-254386-268108 hallmark;refseq 22;22;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Helicobacteraceae;Helicobacter Helicobacter pylori UM299 prophage linear Cluster_69 Epsilonproteobacteria_gi_529973389-706111-719833 hallmark;refseq 22;22;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Helicobacteraceae;Helicobacter Helicobacter pylori UM032 prophage linear Cluster_69 Epsilonproteobacteria_gi_530280362-386870-414707 hallmark;refseq 34;31;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Helicobacteraceae;Helicobacter Helicobacter pylori UM037 prophage linear Cluster_69 Epsilonproteobacteria_gi_537791908 hallmark;refseq 23;22;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Helicobacteraceae;Helicobacter Helicobacter pylori FD430 extrachromosomal linear Cluster_69 Epsilonproteobacteria_gi_544651181 hallmark 22;7;4;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Campylobacteraceae;Campylobacter Campylobacter concisus UNSW3 extrachromosomal linear Cluster_402 Epsilonproteobacteria_gi_544653311-62-36896 hallmark;refseq 51;18;9;24 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Campylobacteraceae;Campylobacter Campylobacter concisus UNSWCS prophage linear Cluster_183 Epsilonproteobacteria_gi_544654569 hallmark 19;5;2;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Campylobacteraceae;Campylobacter Campylobacter concisus UNSWCS extrachromosomal linear Cluster_402 Epsilonproteobacteria_gi_544657562 hallmark 57;15;5;37 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Campylobacteraceae;Campylobacter Campylobacter concisus ATCC 51562 extrachromosomal circular Cluster_123 Epsilonproteobacteria_gi_544659823 hallmark 70;5;26;39 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Campylobacteraceae;Campylobacter Campylobacter concisus UNSW2 extrachromosomal linear Cluster_123 Epsilonproteobacteria_gi_544748168 hallmark;refseq 21;19;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Helicobacteraceae;Helicobacter Helicobacter pylori PZ5080 extrachromosomal linear Cluster_69 Epsilonproteobacteria_gi_544749112 refseq;vdb 22;13;9; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Helicobacteraceae;Helicobacter Helicobacter pylori PZ5086 extrachromosomal linear Cluster_69 Epsilonproteobacteria_gi_544887605 hallmark;refseq 24;22;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Helicobacteraceae;Helicobacter Helicobacter pylori UM037 extrachromosomal linear Cluster_69 Epsilonproteobacteria_gi_544889330-0-15098 hallmark;refseq 18;18;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Helicobacteraceae;Helicobacter Helicobacter pylori UM038 prophage linear Cluster_69 Epsilonproteobacteria_gi_544890110 refseq 13;11;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Helicobacteraceae;Helicobacter Helicobacter pylori UM038 extrachromosomal linear Cluster_239 Epsilonproteobacteria_gi_544898238-0-17005 hallmark;refseq 20;20;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Helicobacteraceae;Helicobacter Helicobacter pylori UM114 prophage linear Cluster_69 Epsilonproteobacteria_gi_544898671-13912-27790 refseq 11;10;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Helicobacteraceae;Helicobacter Helicobacter pylori UM114 prophage linear Cluster_239 Epsilonproteobacteria_gi_545301943 refseq 11;10;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Helicobacteraceae;Helicobacter Helicobacter pylori GAM117Ai extrachromosomal linear Cluster_239 Epsilonproteobacteria_gi_558871270 refseq 9;9;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Helicobacteraceae;Helicobacter Helicobacter pylori X47-2AL extrachromosomal linear Cluster_239 Epsilonproteobacteria_gi_57506173 hallmark 26;8;6;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Epsilonproteobacteria;Campylobacterales;Campylobacteraceae;Campylobacter Campylobacter upsaliensis RM3195 extrachromosomal linear Cluster_69 Erysipelotrichia_gi_218292494-3544-39853 hallmark;refseq 59;25;3;31 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Erysipelotrichia;Erysipelotrichales;Erysipelotrichaceae;Catenibacterium Catenibacterium mitsuokai DSM 15897 prophage linear Cluster_17 Erysipelotrichia_gi_218293816 hallmark;refseq 69;19;13;37 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Erysipelotrichia;Erysipelotrichales;Erysipelotrichaceae;Catenibacterium Catenibacterium mitsuokai DSM 15897 extrachromosomal linear Cluster_57 Erysipelotrichia_gi_365833705-246515-283731 hallmark;refseq 52;26;4;22 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Erysipelotrichia;Erysipelotrichales;Erysipelotrichaceae;Coprobacillus Coprobacillus sp. 3_3_56FAA prophage linear Cluster_50 Erysipelotrichia_gi_422330420 hallmark;refseq 37;15;4;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Firmicutes;Erysipelotrichia;Erysipelotrichales;Erysipelotrichaceae;unknown Erysipelotrichaceae bacterium 6_1_45 extrachromosomal linear Cluster_200 Erysipelotrichia_gi_422330460 hallmark;refseq 20;14;1;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Erysipelotrichia;Erysipelotrichales;Erysipelotrichaceae;unknown Erysipelotrichaceae bacterium 6_1_45 extrachromosomal linear Cluster_200 Flavobacteriia_gi_213963944 hallmark 50;6;7;37 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Bacteroidetes;Flavobacteriia;Flavobacteriales;Flavobacteriaceae;Capnocytophaga Capnocytophaga sputigena ATCC 33612 extrachromosomal linear Cluster_113 Flavobacteriia_gi_423326479 refseq 50;23;1;26 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Bacteroidetes;Flavobacteriia;Flavobacteriales;Flavobacteriaceae;Myroides Myroides [odoratimimus] CIP 103059 extrachromosomal linear Cluster_279 Flavobacteriia_gi_444366862 hallmark;refseq 63;25;6;32 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Bacteroidetes;Flavobacteriia;Flavobacteriales;Flavobacteriaceae;Capnocytophaga Capnocytophaga sp. oral taxon 332 str. F0381 extrachromosomal circular Cluster_373 Flavobacteriia_gi_444380918 hallmark 18;2;1;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Bacteroidetes;Flavobacteriia;Flavobacteriales;Flavobacteriaceae;Capnocytophaga Capnocytophaga sp. oral taxon 326 str. F0382 extrachromosomal linear Cluster_113 Flavobacteriia_gi_483018745 hallmark;vdb 12;1;6;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Bacteroidetes;Flavobacteriia;Flavobacteriales;Flavobacteriaceae;Capnocytophaga Capnocytophaga cynodegmi DSM 19736 extrachromosomal linear unclustered Flavobacteriia_gi_483493097-10773-28749 hallmark;noncaudo 19;5;4;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Bacteroidetes;Flavobacteriia;Flavobacteriales;Flavobacteriaceae;Chryseobacterium Chryseobacterium taeanense ARB2 prophage linear Cluster_4 Flavobacteriia_gi_483493097-1574-10450 hallmark;noncaudo 11;3;1;7 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Bacteroidetes;Flavobacteriia;Flavobacteriales;Flavobacteriaceae;Chryseobacterium Chryseobacterium taeanense ARB2 prophage linear Cluster_175 Flavobacteriia_gi_484003514-0-31508 hallmark;refseq 45;19;3;23 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Tunalikevirus;unknown Bacteria;Bacteroidetes;Flavobacteriia;Flavobacteriales;Flavobacteriaceae;Riemerella Riemerella columbina DSM 16469 prophage linear Cluster_314 Flavobacteriia_gi_484003640 hallmark 44;4;6;34 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Bacteroidetes;Flavobacteriia;Flavobacteriales;Flavobacteriaceae;Riemerella Riemerella columbina DSM 16469 extrachromosomal linear Cluster_113 Flavobacteriia_gi_484003720 hallmark;refseq 42;26;3;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Bacteroidetes;Flavobacteriia;Flavobacteriales;Flavobacteriaceae;Riemerella Riemerella columbina DSM 16469 extrachromosomal linear Cluster_373 Flavobacteriia_gi_484038015 refseq 26;20;1;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Bacteroidetes;Flavobacteriia;Flavobacteriales;Flavobacteriaceae;Riemerella Riemerella anatipestifer RA-SG extrachromosomal linear Cluster_373 Flavobacteriia_gi_487372893 hallmark;refseq 49;14;;35 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Bacteroidetes;Flavobacteriia;Flavobacteriales;Flavobacteriaceae;Flavobacterium Flavobacterium sp. SCGC AAA160-P02 extrachromosomal linear Cluster_608 Flavobacteriia_gi_487373049 refseq 20;11;;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Bacteroidetes;Flavobacteriia;Flavobacteriales;Flavobacteriaceae;Flavobacterium Flavobacterium sp. SCGC AAA160-P02 extrachromosomal linear Cluster_280 Fusobacteriia_gi_224580831-44287-86520 hallmark;refseq;vdb 66;21;16;29 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Fusobacteria;Fusobacteriia;Fusobacteriales;Fusobacteriaceae;Fusobacterium Fusobacterium nucleatum subsp. animalis D11 prophage linear Cluster_251 Fusobacteriia_gi_262039271 hallmark 43;12;6;25 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Fusobacteria;Fusobacteriia;Fusobacteriales;Leptotrichiaceae;Leptotrichia Leptotrichia goodfellowii F0264 extrachromosomal linear Cluster_355 Fusobacteriia_gi_343197991 hallmark 73;9;6;58 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Fusobacteria;Fusobacteriia;Fusobacteriales;Fusobacteriaceae;Fusobacterium Fusobacterium varium ATCC 27725 extrachromosomal linear Cluster_30 Fusobacteriia_gi_34762154 hallmark 69;11;11;47 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Fusobacteria;Fusobacteriia;Fusobacteriales;Fusobacteriaceae;Fusobacterium Fusobacterium nucleatum subsp. vincentii ATCC 49256 extrachromosomal linear Cluster_48 Fusobacteriia_gi_34763346 refseq 28;7;2;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Fusobacteria;Fusobacteriia;Fusobacteriales;Fusobacteriaceae;Fusobacterium Fusobacterium nucleatum subsp. vincentii ATCC 49256 extrachromosomal linear Cluster_48 Fusobacteriia_gi_419840980 hallmark;refseq;vdb 27;12;7;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Fusobacteria;Fusobacteriia;Fusobacteriales;Fusobacteriaceae;Fusobacterium Fusobacterium necrophorum subsp. funduliforme ATCC 51357 extrachromosomal linear Cluster_429 Fusobacteriia_gi_419841405 hallmark;refseq 57;20;9;28 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Fusobacteria;Fusobacteriia;Fusobacteriales;Fusobacteriaceae;Fusobacterium Fusobacterium necrophorum subsp. funduliforme ATCC 51357 extrachromosomal linear Cluster_6 Fusobacteriia_gi_421499368 hallmark 40;8;8;24 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Fusobacteria;Fusobacteriia;Fusobacteriales;Fusobacteriaceae;Fusobacterium Fusobacterium necrophorum subsp. funduliforme Fnf 1007 extrachromosomal linear Cluster_48 Fusobacteriia_gi_421501288 hallmark 27;9;5;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Fusobacteria;Fusobacteriia;Fusobacteriales;Fusobacteriaceae;Fusobacterium Fusobacterium necrophorum subsp. funduliforme Fnf 1007 extrachromosomal linear Cluster_48 Fusobacteriia_gi_545623867 hallmark 79;20;10;49 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Fusobacteria;Fusobacteriia;Fusobacteriales;Leptotrichiaceae;Leptotrichia Leptotrichia wadei F0279 extrachromosomal linear Cluster_48 Fusobacteriia_gi_545660453 hallmark 36;10;3;23 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Fusobacteria;Fusobacteriia;Fusobacteriales;Leptotrichiaceae;Leptotrichia Leptotrichia sp. oral taxon 215 str. W9775 extrachromosomal linear Cluster_121 Fusobacteriia_gi_545663287-13-31320 hallmark 59;18;7;34 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Fusobacteria;Fusobacteriia;Fusobacteriales;Leptotrichiaceae;Leptotrichia Leptotrichia sp. oral taxon 225 str. F0581 prophage linear Cluster_48 Fusobacteriia_gi_547450323-34938-67437 hallmark;refseq;vdb 50;17;13;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Fusobacteria;Fusobacteriia;Fusobacteriales;Fusobacteriaceae;Fusobacterium Fusobacterium sp. CAG:649 prophage linear Cluster_429 Fusobacteriia_gi_548239132 hallmark;refseq 56;23;9;24 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Fusobacteria;Fusobacteriia;Fusobacteriales;Fusobacteriaceae;Fusobacterium Fusobacterium sp. CAG:439 extrachromosomal linear Cluster_21 Fusobacteriia_gi_548240924 refseq;vdb 22;7;6;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Fusobacteria;Fusobacteriia;Fusobacteriales;Fusobacteriaceae;Fusobacterium Fusobacterium sp. CAG:439 extrachromosomal linear Cluster_21 Gammaproteobacteria_gi_104779316-4422466-4470170 hallmark;refseq 57;27;16;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas entomophila L48 prophage linear Cluster_0 Gammaproteobacteria_gi_107098994-664473-684316 hallmark;noncaudo 25;12;8;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa PACS2 prophage linear Cluster_0 Gammaproteobacteria_gi_107098994-734002-745632 hallmark;noncaudo 12;5;6;1 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa PACS2 prophage linear Cluster_13 Gammaproteobacteria_gi_108793532-64-68281 hallmark;refseq 75;66;7;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis Antiqua prophage linear Cluster_9 Gammaproteobacteria_gi_108793732-62-65941 hallmark;refseq 71;64;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis Nepal516 prophage linear Cluster_9 Gammaproteobacteria_gi_10955964 refseq 11;10;;1 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio parahaemolyticus extrachromosomal linear Cluster_14 Gammaproteobacteria_gi_110645304-788517-797623 noncaudo 12;7;2;3 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa PAO1 prophage linear Cluster_13 Gammaproteobacteria_gi_116048575-4345162-4355418 noncaudo 13;10;1;2 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa UCBPP-PA14 prophage linear Cluster_13 Gammaproteobacteria_gi_116177070 hallmark;refseq 44;41;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis FV-1 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_116177077 hallmark;refseq 36;22;8;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis FV-1 extrachromosomal linear Cluster_18 Gammaproteobacteria_gi_116177078-7188-17197 noncaudo 13;3;2;8 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis FV-1 prophage linear Cluster_51 Gammaproteobacteria_gi_116177124-3925-19378 hallmark;refseq;vdb 23;14;6;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis FV-1 prophage linear Cluster_5 Gammaproteobacteria_gi_117622295-2259632-2282445 hallmark;refseq 27;21;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli APEC O1 prophage linear Cluster_0 Gammaproteobacteria_gi_117622295-2570198-2610336 hallmark;refseq;vdb 58;45;8;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli APEC O1 prophage linear Cluster_11 Gammaproteobacteria_gi_117622295-2737456-2778918 hallmark;refseq 55;49;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli APEC O1 prophage linear Cluster_7 Gammaproteobacteria_gi_117622295-5003616-5049433 hallmark;refseq;vdb 59;36;17;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli APEC O1 prophage linear Cluster_2 Gammaproteobacteria_gi_117622295-919777-954157 hallmark;refseq 42;34;8; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli APEC O1 prophage linear Cluster_0 Gammaproteobacteria_gi_118585394-23851-53771 hallmark;refseq 39;39;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae 1587 prophage linear Cluster_97 Gammaproteobacteria_gi_118585408-36044-41368 hallmark;refseq 10;8;2; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae 1587 prophage linear Cluster_14 Gammaproteobacteria_gi_118585421-26724-34808 hallmark;refseq;vdb 13;11;;2 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae 1587 prophage linear Cluster_14 Gammaproteobacteria_gi_118585481-0-5609 hallmark;refseq 10;8;;2 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae 1587 prophage linear Cluster_14 Gammaproteobacteria_gi_118585508-0-2943 hallmark;refseq 4;4;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae 1587 prophage linear Cluster_14 Gammaproteobacteria_gi_118585512 hallmark;refseq 6;6;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae 1587 extrachromosomal linear Cluster_242 Gammaproteobacteria_gi_118585532 noncaudo 5;2;;3 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae 1587 extrachromosomal linear Cluster_14 Gammaproteobacteria_gi_118585854-33338-40720 noncaudo 10;6;2;2 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae MZO-3 prophage linear Cluster_14 Gammaproteobacteria_gi_118585879-32585-39012 hallmark;refseq 11;11;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae MZO-3 prophage linear Cluster_14 Gammaproteobacteria_gi_120615214 refseq 8;8;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae B33 extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_121587487 hallmark;refseq 60;42;10;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae 2740-80 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_121729854 hallmark 16;6;1;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae V52 extrachromosomal linear Cluster_285 Gammaproteobacteria_gi_121730290 noncaudo 5;2;3; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae V52 extrachromosomal linear Cluster_198 Gammaproteobacteria_gi_121730307 refseq 4;4;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae V52 extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_123440403-1849767-1887256 hallmark;refseq 48;31;7;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia enterocolitica subsp. enterocolitica 8081 prophage linear Cluster_0 Gammaproteobacteria_gi_126172257-2530963-2542704 hallmark;noncaudo 16;4;2;10 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Alteromonadales;Shewanellaceae;Shewanella Shewanella baltica OS155 prophage linear Cluster_14 Gammaproteobacteria_gi_134133424 hallmark;refseq 42;40;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis biovar Antiqua str. UG05-0454 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_134133519 hallmark;refseq 54;49;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis biovar Orientalis str. MG05-1020 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_134133610-16407-41116 refseq 24;22;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis biovar Mediaevalis str. K1973002 prophage linear Cluster_9 Gammaproteobacteria_gi_134133618 hallmark;refseq 18;18;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis biovar Mediaevalis str. K1973002 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_134133676 hallmark;refseq;vdb 32;19;9;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis biovar Antiqua str. B42003004 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_134133678 hallmark;refseq 30;28;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis biovar Antiqua str. B42003004 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_134133752 hallmark;refseq 36;34;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis biovar Antiqua str. E1979001 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_134133756 refseq;vdb 19;12;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis biovar Antiqua str. E1979001 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_145629787 hallmark;refseq 52;26;9;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Haemophilus Haemophilus influenzae 22.1-21 extrachromosomal linear Cluster_134 Gammaproteobacteria_gi_145629842 hallmark;refseq 30;15;8;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Haemophilus Haemophilus influenzae 22.1-21 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_145630842-65824-83192 hallmark;refseq 22;14;2;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Haemophilus Haemophilus influenzae R3021 prophage linear Cluster_0 Gammaproteobacteria_gi_145631693 hallmark;refseq 45;31;7;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Haemophilus Haemophilus influenzae R3021 extrachromosomal linear Cluster_288 Gammaproteobacteria_gi_145631907 hallmark;refseq 30;14;1;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Haemophilus Haemophilus influenzae R3021 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_145633902 hallmark 39;13;21;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Haemophilus Haemophilus influenzae 3655 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_145633946 hallmark;refseq 40;19;12;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Haemophilus Haemophilus influenzae 3655 extrachromosomal linear Cluster_21 Gammaproteobacteria_gi_145635753 hallmark;refseq 41;20;13;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Haemophilus Haemophilus influenzae PittAA extrachromosomal linear Cluster_21 Gammaproteobacteria_gi_145635794 hallmark;refseq 32;19;8;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Haemophilus Haemophilus influenzae PittAA extrachromosomal linear Cluster_21 Gammaproteobacteria_gi_145635828 hallmark;refseq 29;17;7;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Haemophilus Haemophilus influenzae PittAA extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_145635913 hallmark 19;8;4;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Haemophilus Haemophilus influenzae PittAA extrachromosomal linear Cluster_72 Gammaproteobacteria_gi_145639936-1961-33637 hallmark;refseq 47;30;3;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Haemophilus Haemophilus influenzae PittII prophage linear Cluster_0 Gammaproteobacteria_gi_145640015 hallmark;refseq 29;15;11;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Haemophilus Haemophilus influenzae PittII extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_145642085 hallmark;refseq 47;22;11;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Haemophilus Haemophilus influenzae 22.4-21 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_145642304 hallmark;refseq 29;13;3;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Haemophilus Haemophilus influenzae 22.4-21 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_146305042-2338332-2348667 hallmark;noncaudo 15;5;2;8 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas mendocina ymp prophage linear Cluster_13 Gammaproteobacteria_gi_147671401-1012837-1046619 hallmark;refseq 45;43;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae O395 prophage linear Cluster_97 Gammaproteobacteria_gi_147671401-561159-567544 noncaudo 9;9;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae O395 prophage linear Cluster_12 Gammaproteobacteria_gi_147673035-1115122-1139313 refseq 20;9;4;7 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae O395 prophage linear Cluster_12 Gammaproteobacteria_gi_147673035-689119-722678 hallmark;refseq 54;41;3;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae O395 prophage linear Cluster_3 Gammaproteobacteria_gi_147673035-764575-799610 hallmark;refseq 56;42;4;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae O395 prophage linear Cluster_3 Gammaproteobacteria_gi_149110192 hallmark;refseq 22;15;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_149113253-47261-78043 hallmark;refseq 38;35;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella "Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701" prophage linear Cluster_0 Gammaproteobacteria_gi_149113271-45660-66264 hallmark;refseq 25;25;; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella "Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701" prophage linear Cluster_3 Gammaproteobacteria_gi_149113312 refseq 17;14;3; Viruses;unclassified phages;;;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella "Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701" extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_149113603 refseq 10;8;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis biovar Orientalis str. F1991016 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_149113604 refseq 16;14;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis biovar Orientalis str. F1991016 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_149192253-2769-11670 hallmark;noncaudo 12;4;1;7 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio shilonii AK1 prophage linear Cluster_14 Gammaproteobacteria_gi_149192721-0-77652 hallmark;refseq;vdb 84;65;13;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis CA88-4125 prophage linear Cluster_9 Gammaproteobacteria_gi_149910720 hallmark;refseq 53;25;2;26 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Alteromonadales;Moritellaceae;Moritella Moritella sp. PE36 extrachromosomal circular Cluster_248 Gammaproteobacteria_gi_152983466-5530314-5538909 noncaudo 13;9;1;3 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa PA7 prophage linear Cluster_13 Gammaproteobacteria_gi_153901837-0-17924 hallmark;refseq 28;27;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480 prophage linear Cluster_82 Gammaproteobacteria_gi_153901840-0-26994 hallmark;refseq 36;31;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480 prophage linear Cluster_3 Gammaproteobacteria_gi_153901868 hallmark;refseq 30;25;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480 extrachromosomal linear Cluster_11 Gammaproteobacteria_gi_153946813-2506817-2556994 hallmark;refseq 69;49;7;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pseudotuberculosis IP 31758 prophage linear Cluster_0 Gammaproteobacteria_gi_156105541-127-29153 hallmark;refseq 29;26;2;1 Viruses;unclassified;unclassified;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. SL317 prophage linear Cluster_1 Gammaproteobacteria_gi_156105548 hallmark;refseq 67;51;4;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. SL317 extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_156105549 hallmark;refseq 48;41;3;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. SL317 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_156105551 hallmark;refseq 37;29;6;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. SL317 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_156105552 refseq 29;25;1;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. SL317 extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_156105555 hallmark;refseq 21;19;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. SL317 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_15640032-1564445-1574540 refseq 14;12;1;1 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae O1 biovar El Tor str. N16961 prophage linear Cluster_12 Gammaproteobacteria_gi_156718201-0-49233 hallmark;refseq 62;54;2;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537 prophage linear Cluster_1 Gammaproteobacteria_gi_156718208-47218-78761 hallmark;refseq 44;35;5;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537 prophage linear Cluster_1 Gammaproteobacteria_gi_156718209 hallmark;refseq 85;56;23;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_156718289 hallmark;refseq 46;34;8;4 Viruses;unclassified;unclassified;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_156972381-2310900-2320016 noncaudo 10;3;3;4 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio campbellii ATCC BAA-1116 prophage linear Cluster_19 Gammaproteobacteria_gi_156975952-956668-968479 noncaudo 19;10;1;8 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio campbellii ATCC BAA-1116 prophage linear Cluster_14 Gammaproteobacteria_gi_157144296-1746080-1796777 hallmark;refseq 67;44;8;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Citrobacter Citrobacter koseri ATCC BAA-895 prophage linear Cluster_26 Gammaproteobacteria_gi_157154711-826855-853484 hallmark;refseq 40;30;6;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli E24377A prophage linear Cluster_1 Gammaproteobacteria_gi_157362818 hallmark;refseq 74;29;13;32 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Serratia Serratia proteamaculans 568 extrachromosomal linear Cluster_48 Gammaproteobacteria_gi_15829254-1246015-1308207 hallmark;refseq 83;78;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. Sakai prophage linear Cluster_5 Gammaproteobacteria_gi_15829254-2158693-2203939 hallmark;refseq;vdb 64;43;20;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. Sakai prophage linear Cluster_1 Gammaproteobacteria_gi_15829254-2206585-2235715 hallmark;refseq;vdb 33;25;6;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. Sakai prophage linear Cluster_4 Gammaproteobacteria_gi_16082781-62-72868 hallmark;refseq 81;62;15;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis CO92 prophage linear Cluster_9 Gammaproteobacteria_gi_162417821 hallmark;refseq 116;74;28;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis Angola extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_163769653-147814-192145 hallmark;refseq 50;49;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC508 prophage linear Cluster_5 Gammaproteobacteria_gi_163769656-28847-60348 hallmark;refseq 42;34;6;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC508 prophage linear Cluster_0 Gammaproteobacteria_gi_163769668-9969-46131 hallmark;refseq 45;35;7;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC508 prophage linear Cluster_1 Gammaproteobacteria_gi_163769670-0-20995 hallmark;refseq 25;20;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC508 prophage linear Cluster_1 Gammaproteobacteria_gi_163769672-6904-44124 hallmark;refseq 41;31;9;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC508 prophage linear Cluster_2 Gammaproteobacteria_gi_163769687-0-19104 hallmark;refseq;vdb 19;14;5; Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC508 prophage linear Cluster_1 Gammaproteobacteria_gi_163769691 hallmark;refseq 40;27;10;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC508 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_163769697 hallmark;refseq 41;30;10;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC508 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_163769699 hallmark;refseq 48;28;15;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC508 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_163769709 hallmark;refseq 24;21;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC508 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_163769720 hallmark;refseq 18;14;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC508 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_163769721 refseq 16;11;5; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC508 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_163769725 hallmark;refseq 12;10;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC508 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_163769990-2047-38459 hallmark;refseq 34;20;12;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC869 prophage linear Cluster_4 Gammaproteobacteria_gi_163769990-55835-82997 hallmark;refseq 39;31;6;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC869 prophage linear Cluster_1 Gammaproteobacteria_gi_163770003-63-94197 hallmark;refseq;vdb 63;51;9;3 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC869 prophage linear Cluster_0 Gammaproteobacteria_gi_163770041 hallmark;refseq 49;36;12;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC869 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_163770045 hallmark;refseq 32;29;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC869 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_163770046 hallmark;refseq 30;27;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC869 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_163770050 hallmark;refseq 17;16;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC869 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_163770052 hallmark;refseq 11;9;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC869 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_163779548-165414-198954 hallmark;refseq 41;41;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4501 prophage linear Cluster_5 Gammaproteobacteria_gi_163779553-14718-54610 hallmark;refseq;vdb 54;25;17;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4501 prophage linear Cluster_3 Gammaproteobacteria_gi_163779561-0-30536 hallmark;refseq 28;16;11;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4501 prophage linear Cluster_4 Gammaproteobacteria_gi_163779561-52716-87565 hallmark;refseq 43;33;7;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4501 prophage linear Cluster_1 Gammaproteobacteria_gi_163779567-48191-79988 hallmark;refseq 37;30;7; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4501 prophage linear Cluster_4 Gammaproteobacteria_gi_163779568-537-75401 hallmark;refseq 51;40;10;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4501 prophage linear Cluster_1 Gammaproteobacteria_gi_163779570-26050-63267 hallmark;refseq 41;31;9;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4501 prophage linear Cluster_2 Gammaproteobacteria_gi_163779583-0-27377 hallmark;refseq 45;39;6; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4501 prophage linear Cluster_5 Gammaproteobacteria_gi_163779592 refseq 26;14;9;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4501 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_163779594-4805-28211 hallmark;refseq 37;24;8;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4501 prophage linear Cluster_4 Gammaproteobacteria_gi_163779599 hallmark;refseq 32;25;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4501 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_163779600 hallmark;refseq 31;31;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4501 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_163779605 refseq 22;15;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4501 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_163779610 hallmark;refseq 14;12;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4501 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_163779611 refseq 16;15;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4501 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_163779619 refseq 17;10;7; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4501 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_163779798-140948-178169 hallmark;refseq 40;30;9;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4486 prophage linear Cluster_2 Gammaproteobacteria_gi_163779800-235265-274335 hallmark;refseq 42;42;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4486 prophage linear Cluster_5 Gammaproteobacteria_gi_163779811-94879-107565 hallmark;refseq;vdb 13;9;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4486 prophage linear Cluster_0 Gammaproteobacteria_gi_163779816 hallmark;refseq 95;43;45;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4486 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_163779824-21453-57611 hallmark;refseq;vdb 46;36;7;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4486 prophage linear Cluster_1 Gammaproteobacteria_gi_163779842 refseq 17;10;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4486 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_163779843 refseq 18;14;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4486 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_163779845 refseq 17;14;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4486 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_163779966-174970-212354 hallmark;refseq 40;40;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4401 prophage linear Cluster_5 Gammaproteobacteria_gi_163779975-1184-24854 hallmark;refseq 32;26;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4401 prophage linear Cluster_0 Gammaproteobacteria_gi_163779975-74931-112470 hallmark;refseq 48;29;9;10 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4401 prophage linear Cluster_2 Gammaproteobacteria_gi_163779976-28281-70631 hallmark;refseq;vdb 56;40;12;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4401 prophage linear Cluster_1 Gammaproteobacteria_gi_163779982-22714-59935 hallmark;refseq 41;31;9;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4401 prophage linear Cluster_2 Gammaproteobacteria_gi_163779984-65597-72817 refseq 14;10;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4401 prophage linear Cluster_19 Gammaproteobacteria_gi_163779992-24677-51811 hallmark;refseq 42;31;7;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4401 prophage linear Cluster_4 Gammaproteobacteria_gi_163779995 hallmark;refseq 72;48;22;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4401 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_163780013 hallmark;refseq 27;22;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4401 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_163780161-102456-133957 hallmark;refseq 42;34;6;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4076 prophage linear Cluster_0 Gammaproteobacteria_gi_163780172-27411-62213 hallmark;refseq 50;36;10;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4076 prophage linear Cluster_4 Gammaproteobacteria_gi_163780174-0-41863 hallmark;refseq 58;43;15; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4076 prophage linear Cluster_1 Gammaproteobacteria_gi_163780175-7-33059 hallmark;refseq 37;28;9; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4076 prophage linear Cluster_1 Gammaproteobacteria_gi_163780184 hallmark;refseq 27;24;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4076 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_163780186 refseq 22;14;7;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4076 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_163780189 hallmark;refseq 20;17;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4076 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_163780190 hallmark;refseq 16;13;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4076 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_163780300-242-34160 hallmark;refseq 31;19;11;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4113 prophage linear Cluster_4 Gammaproteobacteria_gi_163780300-52090-86935 hallmark;refseq 44;34;7;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4113 prophage linear Cluster_1 Gammaproteobacteria_gi_163780304-0-80178 hallmark;refseq 33;26;7; Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4113 prophage linear Cluster_1 Gammaproteobacteria_gi_163780306-25988-63209 hallmark;refseq 41;31;9;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4113 prophage linear Cluster_2 Gammaproteobacteria_gi_163780308-0-10120 hallmark;refseq 10;8;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4113 prophage linear Cluster_0 Gammaproteobacteria_gi_163780319-0-30413 hallmark;refseq 33;25;8; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4113 prophage linear Cluster_1 Gammaproteobacteria_gi_163780322-0-23906 hallmark;refseq 36;26;6;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4113 prophage linear Cluster_4 Gammaproteobacteria_gi_163780326-0-30866 hallmark;refseq 35;26;7;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4113 prophage linear Cluster_4 Gammaproteobacteria_gi_163780332 hallmark;refseq 45;30;15; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4113 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_163780337 refseq 30;17;9;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4113 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_163780348 hallmark;refseq 26;23;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4113 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_163780352 hallmark;refseq 22;15;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4113 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_163780355 hallmark;refseq 24;19;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4113 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_163780358 refseq 17;17;; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4113 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_163780360 refseq 15;7;6;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4113 extrachromosomal linear Cluster_19 Gammaproteobacteria_gi_163780522-10-67058 hallmark;refseq 89;63;24;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4196 prophage linear Cluster_4 Gammaproteobacteria_gi_163780527-655-28186 hallmark;refseq 31;23;8; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4196 prophage linear Cluster_1 Gammaproteobacteria_gi_163780534-66814-90104 hallmark;refseq 32;26;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4196 prophage linear Cluster_0 Gammaproteobacteria_gi_163780535-10148-44993 hallmark;refseq 44;34;7;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4196 prophage linear Cluster_1 Gammaproteobacteria_gi_163780540-7149-44369 hallmark;refseq 41;31;9;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4196 prophage linear Cluster_2 Gammaproteobacteria_gi_163780544-0-24839 hallmark;refseq 35;25;6;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4196 prophage linear Cluster_4 Gammaproteobacteria_gi_163780551-114-20894 hallmark;refseq 22;17;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4196 prophage linear Cluster_1 Gammaproteobacteria_gi_163780574 hallmark;refseq 28;21;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4196 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_163780580 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4196 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_163780581 refseq 12;7;5; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4196 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_163780583 hallmark;refseq 15;14;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4196 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_163800103-622013-628634 noncaudo 10;8;;2 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio sp. AND4 prophage linear Cluster_14 Gammaproteobacteria_gi_163800684-217739-226406 refseq 12;8;;4 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio sp. AND4 prophage linear Cluster_14 Gammaproteobacteria_gi_163800684-231292-237534 refseq 9;8;;1 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio sp. AND4 prophage linear Cluster_14 Gammaproteobacteria_gi_163803045 hallmark 40;6;17;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio sp. AND4 extrachromosomal circular Cluster_95 Gammaproteobacteria_gi_16445223-1330832-1391948 hallmark;refseq 79;75;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EDL933 prophage linear Cluster_5 Gammaproteobacteria_gi_16445223-1861227-1930146 hallmark;refseq 98;70;26;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EDL933 prophage linear Cluster_10 Gammaproteobacteria_gi_165939406 hallmark;refseq 76;47;18;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis biovar Orientalis str. IP275 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_16758993-3515445-3549000 hallmark;refseq 45;34;5;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhi str. CT18 prophage linear Cluster_0 Gammaproteobacteria_gi_16763390-4420419-4437147 hallmark;refseq 19;15;1;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 prophage linear Cluster_22 Gammaproteobacteria_gi_170022262-2543502-2586587 hallmark;refseq 55;42;4;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pseudotuberculosis YPIII prophage linear Cluster_0 Gammaproteobacteria_gi_170079663-1349791-1378744 hallmark;refseq 42;36;1;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli str. K-12 substr. DH10B prophage linear Cluster_1 Gammaproteobacteria_gi_170679574-4408908-4441946 hallmark;refseq 42;36;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli SMS-3-5 prophage linear Cluster_0 Gammaproteobacteria_gi_170729251-1167852-1184440 hallmark;refseq 24;14;1;9 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xylella Xylella fastidiosa M12 prophage linear Cluster_271 Gammaproteobacteria_gi_170729251-1206887-1248417 hallmark;refseq 53;32;11;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xylella Xylella fastidiosa M12 prophage linear Cluster_0 Gammaproteobacteria_gi_170783404 hallmark;refseq 11;6;;5 Viruses;ssDNA viruses;unknown;Inoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Stenotrophomonas Stenotrophomonas maltophilia extrachromosomal linear Cluster_153 Gammaproteobacteria_gi_182680572-1128738-1154960 hallmark;refseq 39;15;6;18 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xylella Xylella fastidiosa M23 prophage linear Cluster_271 Gammaproteobacteria_gi_182680572-1169998-1226453 hallmark;refseq 72;32;24;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xylella Xylella fastidiosa M23 prophage linear Cluster_202 Gammaproteobacteria_gi_182680572-453845-468903 hallmark;refseq 23;18;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xylella Xylella fastidiosa M23 prophage linear Cluster_0 Gammaproteobacteria_gi_187730020-808694-878902 hallmark;refseq 92;54;34;4 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella boydii CDC 3083-94 prophage linear Cluster_19 Gammaproteobacteria_gi_188211166 hallmark;refseq 24;15;3;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhi str. E00-7866 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_188475090-329-15997 refseq 28;25;2;1 Viruses;unclassified phages;;;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhi str. E98-3139 prophage linear Cluster_82 Gammaproteobacteria_gi_188475445 hallmark;refseq 26;11;8;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhi str. E98-3139 extrachromosomal linear Cluster_28 Gammaproteobacteria_gi_188507814 hallmark 17;4;1;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhi str. M223 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_188508302 hallmark;refseq 14;11;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhi str. J185 extrachromosomal linear Cluster_21 Gammaproteobacteria_gi_188518118 hallmark;refseq 18;15;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhi str. E02-1180 extrachromosomal linear Cluster_21 Gammaproteobacteria_gi_190572091-1094707-1114531 hallmark;refseq 26;17;1;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Stenotrophomonas Stenotrophomonas maltophilia K279a prophage linear Cluster_0 Gammaproteobacteria_gi_191165455-45895-85269 hallmark;refseq 53;46;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B7A prophage linear Cluster_11 Gammaproteobacteria_gi_191166532-34970-73654 hallmark;refseq 54;40;13;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B7A prophage linear Cluster_1 Gammaproteobacteria_gi_191167993-27250-39328 hallmark;refseq 15;13;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B7A prophage linear Cluster_0 Gammaproteobacteria_gi_191168715-0-22439 hallmark;refseq 33;16;6;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B7A prophage linear Cluster_0 Gammaproteobacteria_gi_191169069 hallmark;refseq 25;23;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B7A extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_191169361 hallmark;refseq 17;11;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B7A extrachromosomal linear Cluster_21 Gammaproteobacteria_gi_191169460 hallmark;refseq 14;11;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B7A extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_191173131-49618-74706 hallmark;refseq 29;22;3;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli F11 prophage linear Cluster_2 Gammaproteobacteria_gi_191174131-25093-34542 hallmark;noncaudo 16;7;;9 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli F11 prophage linear Cluster_36 Gammaproteobacteria_gi_191174547 hallmark;refseq 26;17;;9 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli F11 extrachromosomal linear Cluster_36 Gammaproteobacteria_gi_191174657 noncaudo 5;2;;3 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli F11 extrachromosomal linear Cluster_231 Gammaproteobacteria_gi_193062476-214-34461 hallmark;refseq 42;29;11;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli E22 prophage linear Cluster_0 Gammaproteobacteria_gi_193062758-127293-158667 hallmark;refseq 36;23;7;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli E22 prophage linear Cluster_0 Gammaproteobacteria_gi_193065440-0-21192 hallmark;refseq 28;19;2;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli E22 prophage linear Cluster_37 Gammaproteobacteria_gi_193065556-26371-58919 hallmark;refseq 48;32;13;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli E22 prophage linear Cluster_1 Gammaproteobacteria_gi_193066145 hallmark;refseq 55;37;6;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli E22 extrachromosomal linear Cluster_21 Gammaproteobacteria_gi_193066429 hallmark;refseq 28;21;7; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli E22 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_193066504 hallmark;refseq 25;22;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli E22 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_193066596 hallmark;refseq 20;14;6; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli E22 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_193066605 hallmark;refseq 20;14;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli E22 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_193066647 hallmark;refseq 17;14;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli E22 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_193066661 hallmark;refseq 17;14;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli E22 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_193069523-26110-84954 hallmark;refseq 75;63;11;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli E110019 prophage linear Cluster_4 Gammaproteobacteria_gi_193069707-0-11300 hallmark;refseq 11;9;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli E110019 prophage linear Cluster_0 Gammaproteobacteria_gi_193070463-296-42118 hallmark;refseq 59;52;7; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli E110019 prophage linear Cluster_4 Gammaproteobacteria_gi_193071252-0-18456 hallmark;refseq 22;19;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli E110019 prophage linear Cluster_4 Gammaproteobacteria_gi_193071334 hallmark;refseq 41;32;5;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli E110019 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_193071368 hallmark;refseq 41;27;9;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli E110019 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_193071447 hallmark;refseq;vdb 26;16;8;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli E110019 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_193071636 hallmark;refseq 22;21;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli E110019 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_194426712-51689-95270 hallmark;refseq 57;48;8;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B171 prophage linear Cluster_2 Gammaproteobacteria_gi_194429884 hallmark;refseq 36;27;7;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B171 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_194429976-1818-22245 refseq;vdb 22;16;6; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B171 prophage linear Cluster_1 Gammaproteobacteria_gi_194430027 hallmark;refseq 29;20;8;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B171 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_194430075 hallmark;refseq 35;34;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B171 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_194430110 hallmark;refseq 25;11;8;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B171 extrachromosomal linear Cluster_28 Gammaproteobacteria_gi_194430136 hallmark;refseq 23;17;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B171 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_194430175 refseq 21;15;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B171 extrachromosomal linear Cluster_158 Gammaproteobacteria_gi_194430388 hallmark;refseq 15;13;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B171 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_194430402 hallmark;refseq 13;10;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B171 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_194437158-51502-78958 refseq;vdb 38;31;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 101-1 prophage linear Cluster_1 Gammaproteobacteria_gi_194437990-111223-138774 hallmark;refseq 36;29;3;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 101-1 prophage linear Cluster_3 Gammaproteobacteria_gi_194442203-2729025-2779173 hallmark;refseq 59;53;2;4 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. SL254 prophage linear Cluster_1 Gammaproteobacteria_gi_194442203-4231893-4262598 hallmark;refseq 39;34;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. SL254 prophage linear Cluster_0 Gammaproteobacteria_gi_194447306-3366637-3401332 hallmark;refseq;vdb 42;25;13;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 prophage linear Cluster_0 Gammaproteobacteria_gi_194733902-4314665-4354412 hallmark;refseq 58;46;10;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 prophage linear Cluster_3 Gammaproteobacteria_gi_198241740-2923320-2958107 hallmark;refseq 43;35;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 prophage linear Cluster_0 Gammaproteobacteria_gi_198440825 hallmark 18;3;2;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Pectobacterium Pectobacterium carotovorum subsp. carotovorum WPP14 extrachromosomal linear Cluster_518 Gammaproteobacteria_gi_198441469-40-23750 hallmark;refseq 30;19;5;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Pectobacterium Pectobacterium carotovorum subsp. brasiliensis PBR1692 prophage linear Cluster_11 Gammaproteobacteria_gi_200389291-1006918-1050738 hallmark;refseq 53;48;2;3 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Virchow str. SL491 prophage linear Cluster_1 Gammaproteobacteria_gi_200389291-689033-738117 hallmark;refseq 74;63;4;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Virchow str. SL491 prophage linear Cluster_23 Gammaproteobacteria_gi_205357438 hallmark;refseq 25;23;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29 extrachromosomal linear Cluster_54 Gammaproteobacteria_gi_205357847-57724-88556 hallmark;refseq 32;29;2;1 Viruses;unclassified;unclassified;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella "Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701" prophage linear Cluster_1 Gammaproteobacteria_gi_208805610-0-38258 hallmark;refseq 55;50;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4206 prophage linear Cluster_4 Gammaproteobacteria_gi_208805610-126161-157662 hallmark;refseq 41;34;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4206 prophage linear Cluster_0 Gammaproteobacteria_gi_208805610-4353196-4384833 hallmark;refseq 29;16;12;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4206 prophage linear Cluster_4 Gammaproteobacteria_gi_208805610-4402762-4437026 hallmark;refseq 44;34;7;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4206 prophage linear Cluster_1 Gammaproteobacteria_gi_208810832-383030-409014 hallmark;refseq 32;25;7; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4206 prophage linear Cluster_4 Gammaproteobacteria_gi_208811221 hallmark;refseq 13;11;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4206 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_208811820-0-26106 hallmark;refseq 36;29;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4045 prophage linear Cluster_0 Gammaproteobacteria_gi_208814765-1763850-1787053 hallmark;refseq 28;23;5; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4045 prophage linear Cluster_4 Gammaproteobacteria_gi_208817097-0-39802 hallmark;refseq 58;53;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4045 prophage linear Cluster_4 Gammaproteobacteria_gi_208817245 hallmark;refseq 50;31;18;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4045 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_208818172-1114327-1145829 hallmark;refseq 42;35;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4042 prophage linear Cluster_0 Gammaproteobacteria_gi_208818172-1417-34874 hallmark;refseq 38;29;8;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4042 prophage linear Cluster_1 Gammaproteobacteria_gi_208818172-379948-456201 hallmark;refseq 99;70;26;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4042 prophage linear Cluster_4 Gammaproteobacteria_gi_208818172-42627-78650 hallmark;refseq 48;25;18;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4042 prophage linear Cluster_10 Gammaproteobacteria_gi_208818172-967963-1026423 hallmark;refseq 76;66;9;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4042 prophage linear Cluster_4 Gammaproteobacteria_gi_208822007-631321-667911 hallmark;refseq 36;21;13;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4042 prophage linear Cluster_4 Gammaproteobacteria_gi_208822007-685954-709593 hallmark;refseq 36;28;6;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4042 prophage linear Cluster_1 Gammaproteobacteria_gi_209395693-1505296-1545603 hallmark;refseq 45;20;20;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4115 prophage linear Cluster_4 Gammaproteobacteria_gi_209395693-1554862-1589126 hallmark;refseq 44;34;7;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4115 prophage linear Cluster_1 Gammaproteobacteria_gi_209395693-1697223-1727220 hallmark;refseq 35;27;7;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4115 prophage linear Cluster_1 Gammaproteobacteria_gi_209395693-1749121-1778367 hallmark;refseq 33;24;8;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4115 prophage linear Cluster_1 Gammaproteobacteria_gi_209395693-2072925-2149772 hallmark;refseq 100;71;26;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4115 prophage linear Cluster_4 Gammaproteobacteria_gi_209395693-2661486-2719944 hallmark;refseq 76;66;9;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4115 prophage linear Cluster_4 Gammaproteobacteria_gi_209395693-2807847-2839348 hallmark;refseq 42;35;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4115 prophage linear Cluster_0 Gammaproteobacteria_gi_209693634-1110573-1142791 hallmark;refseq 44;30;2;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Aliivibrio Aliivibrio salmonicida LFI1238 prophage linear Cluster_0 Gammaproteobacteria_gi_209917191-2122868-2167371 hallmark;refseq 60;45;10;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli SE11 prophage linear Cluster_1 Gammaproteobacteria_gi_209917191-2262800-2308985 hallmark;refseq 62;30;14;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli SE11 prophage linear Cluster_0 Gammaproteobacteria_gi_209917191-2659697-2695610 hallmark;refseq 52;44;;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli SE11 prophage linear Cluster_3 Gammaproteobacteria_gi_209953761 refseq 33;17;2;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Providencia Providencia alcalifaciens DSM 30120 extrachromosomal linear unclustered Gammaproteobacteria_gi_209953798 hallmark;refseq 22;12;6;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Providencia Providencia alcalifaciens DSM 30120 extrachromosomal linear Cluster_18 Gammaproteobacteria_gi_209953801-59244-86841 hallmark;refseq 52;22;1;29 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Providencia Providencia alcalifaciens DSM 30120 prophage linear Cluster_5 Gammaproteobacteria_gi_209953824-71393-102145 hallmark;refseq 46;32;6;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Providencia Providencia alcalifaciens DSM 30120 prophage linear Cluster_18 Gammaproteobacteria_gi_209953829 hallmark 24;10;5;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Providencia Providencia alcalifaciens DSM 30120 extrachromosomal linear Cluster_18 Gammaproteobacteria_gi_211594023-1396793-1405425 noncaudo 11;5;2;4 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Photobacterium Photobacterium profundum 3TCK prophage linear Cluster_303 Gammaproteobacteria_gi_211594024-1425157-1447166 hallmark;noncaudo 28;15;4;9 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Photobacterium Photobacterium profundum 3TCK prophage linear Cluster_303 Gammaproteobacteria_gi_211594404-1655113-1662589 hallmark;noncaudo 11;8;1;2 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio alginolyticus 12G01 prophage linear Cluster_14 Gammaproteobacteria_gi_211594590-47462-78403 hallmark;refseq 42;40;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae NCTC 8457 prophage linear Cluster_97 Gammaproteobacteria_gi_211594598-213750-220203 hallmark;refseq 10;10;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae NCTC 8457 prophage linear Cluster_14 Gammaproteobacteria_gi_211594685-13608-50732 hallmark 55;18;8;29 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae NCTC 8457 prophage linear Cluster_21 Gammaproteobacteria_gi_211595727-78619-110861 hallmark;refseq 43;43;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae B33 prophage linear Cluster_97 Gammaproteobacteria_gi_21229478-2434388-2451079 refseq 26;16;2;8 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas campestris pv. campestris str. ATCC 33913 prophage linear Cluster_43 Gammaproteobacteria_gi_212632911-2688102-2694660 hallmark;noncaudo 8;5;;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Alteromonadales;Shewanellaceae;Shewanella Shewanella piezotolerans WP3 prophage linear Cluster_14 Gammaproteobacteria_gi_213971948 hallmark;vdb 35;13;10;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. tomato T1 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_215485161-2810372-2852364 hallmark;refseq 57;47;3;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O127:H6 str. E2348/69 prophage linear Cluster_7 Gammaproteobacteria_gi_215820496-0-35923 hallmark;refseq 47;41;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191 prophage linear Cluster_23 Gammaproteobacteria_gi_215820498-78-38440 hallmark;refseq 62;53;3;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191 prophage linear Cluster_11 Gammaproteobacteria_gi_215820505-49750-64731 hallmark;refseq 17;14;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191 prophage linear Cluster_22 Gammaproteobacteria_gi_216265005 hallmark;refseq 43;24;5;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB900 extrachromosomal linear Cluster_38 Gammaproteobacteria_gi_218547440-2755040-2795034 hallmark;refseq 58;38;13;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia fergusonii ATCC 35469 prophage linear Cluster_0 Gammaproteobacteria_gi_218547440-4194941-4210415 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia fergusonii ATCC 35469 prophage linear Cluster_22 Gammaproteobacteria_gi_218547440-4513178-4557211 hallmark;refseq;vdb 54;33;17;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia fergusonii ATCC 35469 prophage linear Cluster_2 Gammaproteobacteria_gi_218556939-2169551-2205492 hallmark;refseq 44;34;8;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli S88 prophage linear Cluster_0 Gammaproteobacteria_gi_218556939-4953627-4999443 hallmark;refseq;vdb 58;35;17;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli S88 prophage linear Cluster_2 Gammaproteobacteria_gi_218687878-1101538-1163922 hallmark;refseq 71;52;12;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli ED1a prophage linear Cluster_5 Gammaproteobacteria_gi_218687878-1395619-1435534 hallmark;refseq 52;37;11;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli ED1a prophage linear Cluster_4 Gammaproteobacteria_gi_218687878-1658136-1707471 hallmark;refseq;vdb 56;37;13;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli ED1a prophage linear Cluster_4 Gammaproteobacteria_gi_218687878-2381771-2399258 hallmark;refseq 19;15;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli ED1a prophage linear Cluster_0 Gammaproteobacteria_gi_218693476-821201-864826 hallmark;refseq 57;43;10;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 55989 prophage linear Cluster_1 Gammaproteobacteria_gi_218698419-2745834-2791549 hallmark;refseq 60;54;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli IAI39 prophage linear Cluster_19 Gammaproteobacteria_gi_218698419-4625632-4639742 hallmark;refseq 17;15;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli IAI39 prophage linear Cluster_22 Gammaproteobacteria_gi_218703261-1367931-1444021 hallmark;refseq 100;59;32;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMN026 prophage linear Cluster_1 Gammaproteobacteria_gi_218888746-2690476-2740340 hallmark;refseq 69;57;4;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa LESB58 prophage linear Cluster_64 Gammaproteobacteria_gi_218888746-4545226-4553428 noncaudo 13;10;;3 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa LESB58 prophage linear Cluster_13 Gammaproteobacteria_gi_221630420 hallmark;refseq 120;99;7;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli LF82 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_222154829-1000749-1036732 hallmark;refseq 52;46;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli LF82 prophage linear Cluster_11 Gammaproteobacteria_gi_222154829-2736084-2769214 hallmark;refseq 45;39;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli LF82 prophage linear Cluster_0 Gammaproteobacteria_gi_223042260 noncaudo 15;4;4;7 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Actinobacillus Actinobacillus minor 202 extrachromosomal linear Cluster_51 Gammaproteobacteria_gi_223044564-334674-422569 hallmark;refseq 69;34;2;33 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio parahaemolyticus AN-5034 prophage linear Cluster_248 Gammaproteobacteria_gi_223044732-10857-18708 noncaudo 12;6;1;5 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio parahaemolyticus AQ4037 prophage linear Cluster_14 Gammaproteobacteria_gi_223044763-3674-12026 refseq 10;9;;1 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio parahaemolyticus Peru-466 prophage linear Cluster_14 Gammaproteobacteria_gi_223666377-54255-61393 hallmark;refseq 13;11;;2 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae MZO-2 prophage linear Cluster_14 Gammaproteobacteria_gi_223666388-181135-192486 hallmark;refseq 17;11;2;4 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae 623-39 prophage linear Cluster_14 Gammaproteobacteria_gi_223666408 hallmark;refseq 59;24;9;26 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio campbellii HY01 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_223666476-21789-29724 refseq 13;9;;4 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio campbellii HY01 prophage linear Cluster_14 Gammaproteobacteria_gi_223666519-5709-15126 refseq 12;9;1;2 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio campbellii HY01 prophage linear Cluster_14 Gammaproteobacteria_gi_223666609 refseq 10;8;;2 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio campbellii HY01 extrachromosomal linear Cluster_14 Gammaproteobacteria_gi_224514698-5522972-5578841 hallmark;refseq 71;68;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. TW14588 prophage linear Cluster_5 Gammaproteobacteria_gi_224580183 hallmark;refseq 94;44;12;38 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Providencia Providencia stuartii ATCC 25827 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_224580997-57097-96995 hallmark;refseq 59;54;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella sp. D9 prophage linear Cluster_3 Gammaproteobacteria_gi_224581838-1334752-1374177 hallmark;refseq 62;48;7;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594 prophage linear Cluster_11 Gammaproteobacteria_gi_225363919-1529390-1561632 hallmark;refseq 44;44;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae MO10 prophage linear Cluster_97 Gammaproteobacteria_gi_225363919-796706-817294 hallmark;refseq 29;20;2;7 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae MO10 prophage linear Cluster_14 Gammaproteobacteria_gi_225594896 hallmark;refseq 51;22;11;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Proteus Proteus penneri ATCC 35198 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_225936441-19528-28538 refseq 12;9;;3 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio parahaemolyticus K5030 prophage linear Cluster_14 Gammaproteobacteria_gi_225936441-28485-41472 refseq 22;4;1;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio parahaemolyticus K5030 prophage linear Cluster_215 Gammaproteobacteria_gi_227116370-1220538-1254097 hallmark;refseq 54;41;3;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae O395 prophage linear Cluster_3 Gammaproteobacteria_gi_227116370-1295994-1331029 hallmark;refseq 56;42;4;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae O395 prophage linear Cluster_3 Gammaproteobacteria_gi_227116370-1646541-1670732 refseq 20;9;4;7 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae O395 prophage linear Cluster_12 Gammaproteobacteria_gi_227119188-214350-248132 hallmark;refseq 45;43;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae O395 prophage linear Cluster_97 Gammaproteobacteria_gi_227119188-696398-703019 noncaudo 10;9;;1 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae O395 prophage linear Cluster_12 Gammaproteobacteria_gi_229508434-152884-165595 refseq 16;9;3;4 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae BX 330286 prophage linear Cluster_12 Gammaproteobacteria_gi_229509402-183997-191428 refseq 10;9;1; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae B33 prophage linear Cluster_12 Gammaproteobacteria_gi_229510657-1545316-1577558 hallmark;refseq 44;44;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae B33 prophage linear Cluster_97 Gammaproteobacteria_gi_229517779-797262-805877 refseq 12;12;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae RC9 prophage linear Cluster_12 Gammaproteobacteria_gi_229518488-757267-789509 hallmark;refseq 44;44;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae RC9 prophage linear Cluster_97 Gammaproteobacteria_gi_229522229-436716-470354 hallmark;refseq 55;42;4;9 Viruses;dsDNA viruses no RNA stage;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae TM 11079-80 prophage linear Cluster_3 Gammaproteobacteria_gi_229525934-1084013-1091165 hallmark;refseq 13;11;;2 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio albensis VL426 prophage linear Cluster_14 Gammaproteobacteria_gi_229527568-8554-17686 hallmark;refseq 15;12;;3 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae 12129(1) prophage linear Cluster_14 Gammaproteobacteria_gi_229527568-939024-972676 hallmark;refseq 54;42;3;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae 12129(1) prophage linear Cluster_3 Gammaproteobacteria_gi_229605062-852208-858811 noncaudo 10;9;;1 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae MJ-1236 prophage linear Cluster_12 Gammaproteobacteria_gi_229606122-1260437-1292679 hallmark;refseq 44;44;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae MJ-1236 prophage linear Cluster_97 Gammaproteobacteria_gi_229896925 hallmark;refseq 113;81;20;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis Pestoides A extrachromosomal circular Cluster_9 Gammaproteobacteria_gi_229897708 hallmark;refseq 99;67;23;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis biovar Orientalis str. PEXU2 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_229900267 hallmark;refseq 53;48;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis biovar Orientalis str. India 195 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_238756346 hallmark 31;13;12;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia ruckeri ATCC 29473 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_238760571 hallmark;refseq 22;10;4;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia aldovae ATCC 35236 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_238764983-15718-40473 hallmark;refseq 35;27;4;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia kristensenii ATCC 33638 prophage linear Cluster_0 Gammaproteobacteria_gi_238765382 hallmark 28;11;11;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia kristensenii ATCC 33638 extrachromosomal linear Cluster_28 Gammaproteobacteria_gi_238765407 hallmark 25;5;4;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia kristensenii ATCC 33638 extrachromosomal linear Cluster_259 Gammaproteobacteria_gi_238785226-4842-38794 hallmark;refseq 48;23;8;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia bercovieri ATCC 43970 prophage linear Cluster_39 Gammaproteobacteria_gi_238785961 hallmark 25;10;10;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia bercovieri ATCC 43970 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_238790536 hallmark;refseq 43;28;5;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia frederiksenii ATCC 33641 extrachromosomal linear Cluster_137 Gammaproteobacteria_gi_238790690 hallmark 35;13;10;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia frederiksenii ATCC 33641 extrachromosomal linear Cluster_28 Gammaproteobacteria_gi_238899406-4132273-4174198 hallmark;refseq 56;47;9; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli BW2952 prophage linear Cluster_1 Gammaproteobacteria_gi_240948420 hallmark;refseq 54;36;8;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Actinobacillus Actinobacillus minor NM305 extrachromosomal linear Cluster_39 Gammaproteobacteria_gi_240950139 hallmark;refseq 44;23;15;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Actinobacillus Actinobacillus minor NM305 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_240950411 hallmark 27;10;9;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Actinobacillus Actinobacillus minor NM305 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_242237460-2469275-2497312 hallmark;refseq 31;21;7;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Dickeya Dickeya dadantii Ech703 prophage linear Cluster_0 Gammaproteobacteria_gi_253825511 refseq 30;17;5;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Photorhabdus Photorhabdus asymbiotica extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_253987483-4944614-4964246 hallmark;refseq 31;28;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Photorhabdus Photorhabdus asymbiotica prophage linear Cluster_0 Gammaproteobacteria_gi_253987483-8446-26544 hallmark;refseq 22;21;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Photorhabdus Photorhabdus asymbiotica prophage linear Cluster_0 Gammaproteobacteria_gi_254160123-2100684-2122372 hallmark;refseq 26;20;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B str. REL606 prophage linear Cluster_0 Gammaproteobacteria_gi_254225709-15995-50000 hallmark;refseq 53;42;4;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae V51 prophage linear Cluster_3 Gammaproteobacteria_gi_254226666-0-9659 refseq 14;13;;1 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae V51 prophage linear Cluster_12 Gammaproteobacteria_gi_254227128 noncaudo 4;3;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae V51 extrachromosomal linear Cluster_303 Gammaproteobacteria_gi_254227173 noncaudo 4;3;;1 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae V51 extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_254228276-54361-60151 noncaudo 9;1;3;5 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio sp. Ex25 prophage linear Cluster_566 Gammaproteobacteria_gi_254229529-56244-68175 refseq 15;10;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio sp. Ex25 prophage linear Cluster_130 Gammaproteobacteria_gi_254234166-6194059-6200931 noncaudo 11;6;1;4 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa C3719 prophage linear Cluster_13 Gammaproteobacteria_gi_254239388-5902753-5912361 noncaudo 15;11;;4 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa 2192 prophage linear Cluster_13 Gammaproteobacteria_gi_254284862-260828-268081 hallmark;noncaudo 11;9;;2 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae AM-19226 prophage linear Cluster_14 Gammaproteobacteria_gi_254286072-23359-33747 hallmark;refseq 16;12;;4 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae AM-19226 prophage linear Cluster_14 Gammaproteobacteria_gi_254292264 hallmark;refseq 5;5;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae AM-19226 extrachromosomal linear Cluster_14 Gammaproteobacteria_gi_254292279 noncaudo 3;2;;1 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae AM-19226 extrachromosomal linear Cluster_14 Gammaproteobacteria_gi_254360800-29840-63301 hallmark;refseq 49;46;;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Mannheimia Mannheimia haemolytica PHL213 prophage linear Cluster_0 Gammaproteobacteria_gi_254361300-6107-45249 hallmark;refseq 53;31;9;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Mannheimia Mannheimia haemolytica PHL213 prophage linear Cluster_44 Gammaproteobacteria_gi_254362838 hallmark;refseq 39;19;9;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Mannheimia Mannheimia haemolytica PHL213 extrachromosomal linear Cluster_179 Gammaproteobacteria_gi_254449224-7608-26650 hallmark;refseq 22;16;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;unknown;unknown;unknown gamma proteobacterium HTCC5015 prophage linear Cluster_0 Gammaproteobacteria_gi_254449332 hallmark;refseq 25;12;;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;unknown;unknown;unknown gamma proteobacterium HTCC5015 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_254489993-8770-43747 hallmark;refseq 50;24;15;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Thiotrichales;Piscirickettsiaceae;Methylophaga Methylophaga thiooxydans DMS010 prophage linear Cluster_3 Gammaproteobacteria_gi_254507641-77639-91107 hallmark;noncaudo 18;8;3;7 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio sp. 16 prophage linear Cluster_14 Gammaproteobacteria_gi_254520880-2917817-2928605 hallmark;noncaudo 15;5;2;8 Viruses;ssDNA viruses;unknown;Inoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Stenotrophomonas Stenotrophomonas sp. SKA14 prophage linear Cluster_322 Gammaproteobacteria_gi_254791136-1505584-1545891 hallmark;refseq 45;20;20;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. TW14359 prophage linear Cluster_4 Gammaproteobacteria_gi_254791136-1555150-1589414 hallmark;refseq 44;34;7;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. TW14359 prophage linear Cluster_1 Gammaproteobacteria_gi_254791136-1696198-1726195 hallmark;refseq 35;27;7;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. TW14359 prophage linear Cluster_1 Gammaproteobacteria_gi_254791136-1748097-1777343 hallmark;refseq 33;24;8;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. TW14359 prophage linear Cluster_1 Gammaproteobacteria_gi_254791136-2071901-2148753 hallmark;refseq 100;71;26;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. TW14359 prophage linear Cluster_4 Gammaproteobacteria_gi_254791136-2660467-2718925 hallmark;refseq 76;66;9;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. TW14359 prophage linear Cluster_4 Gammaproteobacteria_gi_254791136-2806827-2838328 hallmark;refseq 41;34;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. TW14359 prophage linear Cluster_0 Gammaproteobacteria_gi_255319735 hallmark 12;2;3;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;T4likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter radioresistens SK82 extrachromosomal linear Cluster_210 Gammaproteobacteria_gi_255319998 hallmark 12;5;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Tunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter radioresistens SK82 extrachromosomal linear Cluster_46 Gammaproteobacteria_gi_255745439-481423-489480 refseq 12;12;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae CIRS101 prophage linear Cluster_12 Gammaproteobacteria_gi_255961261-1308394-1345132 hallmark;refseq;vdb 42;26;11;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas fluorescens Pf0-1 prophage linear Cluster_85 Gammaproteobacteria_gi_256352476 hallmark;refseq 24;23;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. FRIK2000 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_256352510-48531-70329 hallmark;refseq 35;30;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. FRIK2000 prophage linear Cluster_0 Gammaproteobacteria_gi_256352521 hallmark;refseq 21;18;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. FRIK2000 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_256352618-14502-55842 hallmark;refseq 52;25;12;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. FRIK2000 prophage linear Cluster_3 Gammaproteobacteria_gi_256352692 hallmark;refseq 30;14;6;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. FRIK2000 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_256352776 hallmark;refseq 24;23;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. FRIK966 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_256352852-0-21774 hallmark;refseq 35;30;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. FRIK966 prophage linear Cluster_0 Gammaproteobacteria_gi_256352936 hallmark;refseq 19;13;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. FRIK966 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_256352956 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. FRIK966 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_256352969-3923-14181 hallmark;refseq 11;7;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. FRIK966 prophage linear Cluster_3 Gammaproteobacteria_gi_257136649-64838-76291 hallmark;noncaudo 19;8;1;10 Viruses;ssDNA viruses;unknown;Inoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas campestris pv. musacearum NCPPB 4381 prophage linear Cluster_322 Gammaproteobacteria_gi_257137173 hallmark;refseq 24;10;2;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. aesculi str. NCPPB 3681 extrachromosomal linear Cluster_476 Gammaproteobacteria_gi_257137521-0-15544 refseq 21;11;9;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. aesculi str. 2250 prophage linear Cluster_71 Gammaproteobacteria_gi_257455533-8222-51655 hallmark;refseq;vdb 52;21;7;24 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Enhydrobacter Enhydrobacter aerosaccus SK60 prophage linear Cluster_304 Gammaproteobacteria_gi_258620050-263012-300436 hallmark;refseq 46;27;9;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio mimicus VM573 prophage linear Cluster_3 Gammaproteobacteria_gi_258623410-96558-103697 noncaudo 10;8;1;1 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio mimicus VM573 prophage linear Cluster_12 Gammaproteobacteria_gi_258626010-56-6504 hallmark;refseq 8;5;;3 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio mimicus VM603 prophage linear Cluster_242 Gammaproteobacteria_gi_260447156-1043782-1070525 hallmark;refseq 30;20;6;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Providencia Providencia rustigianii DSM 4541 prophage linear Cluster_2 Gammaproteobacteria_gi_260447165 hallmark 19;9;5;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Providencia Providencia rustigianii DSM 4541 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_260447166 hallmark;refseq 24;16;1;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Providencia Providencia rustigianii DSM 4541 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_260582441-62963-77108 hallmark;refseq 22;16;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Haemophilus Haemophilus influenzae NT127 prophage linear Cluster_0 Gammaproteobacteria_gi_260582895-0-16961 hallmark;refseq 23;16;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Haemophilus Haemophilus influenzae NT127 prophage linear Cluster_0 Gammaproteobacteria_gi_260583086 hallmark;refseq 64;30;10;24 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Haemophilus Haemophilus influenzae NT127 extrachromosomal linear Cluster_134 Gammaproteobacteria_gi_260775639-290984-388801 hallmark;noncaudo 25;9;2;14 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio coralliilyticus ATCC BAA-450 prophage linear Cluster_242 Gammaproteobacteria_gi_260842239-2144101-2195509 hallmark;refseq 73;53;16;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O103:H2 str. 12009 prophage linear Cluster_1 Gammaproteobacteria_gi_260842239-2861828-2924148 hallmark;refseq 74;69;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O103:H2 str. 12009 prophage linear Cluster_5 Gammaproteobacteria_gi_260842239-840124-880739 hallmark;refseq 44;30;13;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O103:H2 str. 12009 prophage linear Cluster_1 Gammaproteobacteria_gi_260853213-1558973-1609453 hallmark;refseq 71;62;8;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O26:H11 str. 11368 prophage linear Cluster_4 Gammaproteobacteria_gi_260853213-3089703-3138848 hallmark;refseq 66;49;15;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O26:H11 str. 11368 prophage linear Cluster_1 Gammaproteobacteria_gi_260866153-1183559-1243643 hallmark;refseq 78;75;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O111:H- str. 11128 prophage linear Cluster_5 Gammaproteobacteria_gi_260866153-1744537-1773090 hallmark;refseq 33;25;7;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O111:H- str. 11128 prophage linear Cluster_4 Gammaproteobacteria_gi_260866153-2394403-2440474 hallmark;refseq 55;49;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O111:H- str. 11128 prophage linear Cluster_4 Gammaproteobacteria_gi_260866153-2537486-2591159 hallmark;refseq 73;48;21;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O111:H- str. 11128 prophage linear Cluster_10 Gammaproteobacteria_gi_260866153-2614667-2660897 hallmark;refseq 71;61;6;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O111:H- str. 11128 prophage linear Cluster_11 Gammaproteobacteria_gi_260871126 hallmark;refseq 121;101;4;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O111:H- str. 11128 extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_260881935-1635577-1682711 hallmark;refseq 74;49;6;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Enterobacter Enterobacter cancerogenus ATCC 35316 prophage linear Cluster_25 Gammaproteobacteria_gi_261492098-28399-53125 hallmark;vdb 26;2;18;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Mannheimia Mannheimia haemolytica serotype A2 str. BOVINE prophage linear Cluster_72 Gammaproteobacteria_gi_261492216 hallmark;refseq 44;32;8;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Mannheimia Mannheimia haemolytica serotype A2 str. BOVINE extrachromosomal linear Cluster_293 Gammaproteobacteria_gi_261492386 hallmark;refseq 37;18;9;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Mannheimia Mannheimia haemolytica serotype A2 str. BOVINE extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_261492509-75662-113394 hallmark;refseq 54;45;2;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Mannheimia Mannheimia haemolytica serotype A2 str. BOVINE prophage linear Cluster_0 Gammaproteobacteria_gi_261493441-0-32479 hallmark;refseq 48;31;6;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Mannheimia Mannheimia haemolytica serotype A2 str. BOVINE prophage linear Cluster_39 Gammaproteobacteria_gi_261494589-30167-47325 hallmark;refseq 22;21;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Mannheimia Mannheimia haemolytica serotype A2 str. OVINE prophage linear Cluster_0 Gammaproteobacteria_gi_261494889 hallmark;refseq 24;18;;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Mannheimia Mannheimia haemolytica serotype A2 str. OVINE extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_261495244 hallmark;refseq 27;17;3;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Mannheimia Mannheimia haemolytica serotype A2 str. OVINE extrachromosomal linear Cluster_338 Gammaproteobacteria_gi_261495301-3655-46722 hallmark;refseq 59;34;12;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Mannheimia Mannheimia haemolytica serotype A2 str. OVINE prophage linear Cluster_39 Gammaproteobacteria_gi_261495926 hallmark;refseq 28;16;4;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Mannheimia Mannheimia haemolytica serotype A2 str. OVINE extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_261496415 hallmark;refseq 31;23;4;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Mannheimia Mannheimia haemolytica serotype A2 str. OVINE extrachromosomal linear Cluster_293 Gammaproteobacteria_gi_261496959 hallmark;refseq 31;15;8;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Mannheimia Mannheimia haemolytica serotype A2 str. OVINE extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_261819370-3143431-3159096 hallmark;refseq;vdb 22;16;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Pectobacterium Pectobacterium wasabiae WPP163 prophage linear Cluster_21 Gammaproteobacteria_gi_262045650 hallmark;refseq 73;21;15;37 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884 extrachromosomal linear Cluster_26 Gammaproteobacteria_gi_262045653 refseq 19;12;3;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884 extrachromosomal linear Cluster_25 Gammaproteobacteria_gi_262045654 hallmark;refseq 36;27;4;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884 extrachromosomal linear Cluster_25 Gammaproteobacteria_gi_262147151 refseq 9;9;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae INDRE 91/1 extrachromosomal circular Cluster_12 Gammaproteobacteria_gi_262166852 refseq 7;5;;2 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae RC27 extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_262167787-45426-79208 hallmark;refseq 45;43;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae RC27 prophage linear Cluster_97 Gammaproteobacteria_gi_262169251-599-12725 noncaudo 7;6;1; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae RC27 prophage linear Cluster_12 Gammaproteobacteria_gi_262170156-45514-79073 hallmark;refseq 54;41;3;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae RC27 prophage linear Cluster_3 Gammaproteobacteria_gi_262170318-1357443-1364632 hallmark;refseq 11;10;1; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio mimicus MB451 prophage linear Cluster_14 Gammaproteobacteria_gi_262174036 hallmark 60;20;2;38 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio mimicus MB451 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_262392383-2034070-2046001 noncaudo 13;9;1;3 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio sp. Ex25 prophage linear Cluster_130 Gammaproteobacteria_gi_262395299-148838-155099 noncaudo 10;1;5;4 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio sp. Ex25 prophage linear Cluster_566 Gammaproteobacteria_gi_262402114-29309-45270 noncaudo 25;4;4;17 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio sp. RC586 prophage linear Cluster_198 Gammaproteobacteria_gi_269963037-53217-61033 refseq 11;9;;2 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio harveyi 1DA3 prophage linear Cluster_14 Gammaproteobacteria_gi_269968404-1344-13797 noncaudo 14;8;2;4 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio alginolyticus 40B prophage linear Cluster_130 Gammaproteobacteria_gi_270490934 hallmark;refseq 124;81;22;21 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis KIM D27 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_271498578-2014520-2037146 hallmark;refseq 28;20;5;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Dickeya Dickeya dadantii Ech586 prophage linear Cluster_0 Gammaproteobacteria_gi_281190708 noncaudo 9;2;2;5 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Alteromonadales;Pseudoalteromonadaceae;Pseudoalteromonas Pseudoalteromonas sp. BSi20327 extrachromosomal linear Cluster_14 Gammaproteobacteria_gi_28197945-1118855-1143364 hallmark;refseq 41;16;5;20 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xylella Xylella fastidiosa Temecula1 prophage linear Cluster_271 Gammaproteobacteria_gi_28197945-1159609-1216913 hallmark;refseq 73;33;24;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xylella Xylella fastidiosa Temecula1 prophage linear Cluster_202 Gammaproteobacteria_gi_28197945-453992-469050 hallmark;refseq 23;18;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xylella Xylella fastidiosa Temecula1 prophage linear Cluster_0 Gammaproteobacteria_gi_283783779-2730674-2794470 hallmark;refseq 74;46;19;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Citrobacter Citrobacter rodentium ICC168 prophage linear Cluster_10 Gammaproteobacteria_gi_285016821-1792470-1845390 hallmark;noncaudo 19;4;9;6 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas albilineans GPE PC73 prophage linear Cluster_271 Gammaproteobacteria_gi_28896774-1659252-1669725 noncaudo 13;9;;4 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio parahaemolyticus RIMD 2210633 prophage linear Cluster_14 Gammaproteobacteria_gi_290473094-660029-714741 hallmark;refseq 63;34;14;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Xenorhabdus Xenorhabdus bovienii SS-2004 prophage linear Cluster_4 Gammaproteobacteria_gi_290473094-987716-1015762 hallmark;refseq 35;23;7;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Xenorhabdus Xenorhabdus bovienii SS-2004 prophage linear Cluster_0 Gammaproteobacteria_gi_290512895-83197-126411 hallmark;refseq 64;44;6;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella sp. 1_1_55 prophage linear Cluster_148 Gammaproteobacteria_gi_291280824-1586587-1624749 hallmark;refseq 46;36;7;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O55:H7 str. CB9615 prophage linear Cluster_4 Gammaproteobacteria_gi_291280824-1734206-1776333 hallmark;refseq 53;33;16;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O55:H7 str. CB9615 prophage linear Cluster_10 Gammaproteobacteria_gi_291280824-302609-362890 hallmark;refseq 80;52;23;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O55:H7 str. CB9615 prophage linear Cluster_1 Gammaproteobacteria_gi_291280824-5306238-5355168 hallmark;refseq;vdb 59;36;20;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O55:H7 str. CB9615 prophage linear Cluster_1 Gammaproteobacteria_gi_29140543-3501103-3534660 hallmark;refseq 45;34;5;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhi str. Ty2 prophage linear Cluster_0 Gammaproteobacteria_gi_293403699 hallmark;refseq 17;16;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli FVEC1412 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_293409074-1730883-1769898 hallmark;refseq 57;50;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B354 prophage linear Cluster_11 Gammaproteobacteria_gi_293411859 hallmark;refseq 118;92;10;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B354 extrachromosomal circular Cluster_9 Gammaproteobacteria_gi_293417316-72713-103353 hallmark;refseq 41;35;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B185 prophage linear Cluster_0 Gammaproteobacteria_gi_293432968-641885-680236 hallmark;refseq;vdb 43;30;11;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B088 prophage linear Cluster_1 Gammaproteobacteria_gi_294501992-62-65943 hallmark;refseq;vdb 70;63;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis Z176003 prophage linear Cluster_9 Gammaproteobacteria_gi_294624470 hallmark;refseq 13;11;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_294638547-267107-298132 hallmark;refseq 38;31;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Edwardsiella Edwardsiella tarda ATCC 23685 prophage linear Cluster_0 Gammaproteobacteria_gi_294638549-1980854-2021803 hallmark;refseq 55;43;5;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Edwardsiella Edwardsiella tarda ATCC 23685 prophage linear Cluster_3 Gammaproteobacteria_gi_294652002 hallmark 48;10;5;33 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter haemolyticus ATCC 19194 extrachromosomal linear Cluster_114 Gammaproteobacteria_gi_294664179 hallmark;noncaudo 12;4;1;7 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535 extrachromosomal linear Cluster_366 Gammaproteobacteria_gi_294664513 hallmark;noncaudo 22;8;1;13 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535 extrachromosomal linear Cluster_366 Gammaproteobacteria_gi_294665708 hallmark;refseq 43;27;2;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535 extrachromosomal linear Cluster_180 Gammaproteobacteria_gi_296100371-1325089-1370589 hallmark;refseq 72;56;6;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Enterobacter Enterobacter cloacae subsp. cloacae ATCC 13047 prophage linear Cluster_25 Gammaproteobacteria_gi_296100371-3244219-3278678 hallmark;refseq 51;33;7;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Enterobacter Enterobacter cloacae subsp. cloacae ATCC 13047 prophage linear Cluster_25 Gammaproteobacteria_gi_296100371-3638199-3682456 hallmark;refseq 80;63;4;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Enterobacter Enterobacter cloacae subsp. cloacae ATCC 13047 prophage linear Cluster_19 Gammaproteobacteria_gi_298497799-740126-752459 refseq 17;13;1;3 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae MAK 757 prophage linear Cluster_12 Gammaproteobacteria_gi_300714588-106469-139564 hallmark;refseq 44;28;4;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Erwinia Erwinia billingiae Eb661 prophage linear Cluster_0 Gammaproteobacteria_gi_300714588-1247999-1280817 hallmark;refseq 41;33;6;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Erwinia Erwinia billingiae Eb661 prophage linear Cluster_0 Gammaproteobacteria_gi_300721089-1052689-1081804 hallmark;refseq 30;21;4;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Xenorhabdus Xenorhabdus nematophila ATCC 19061 prophage linear Cluster_0 Gammaproteobacteria_gi_300817119-85859-108076 hallmark;refseq 35;28;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MS 107-1 prophage linear Cluster_3 Gammaproteobacteria_gi_300824882 hallmark;refseq 37;32;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MS 119-7 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_300824922 hallmark 34;12;13;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MS 119-7 extrachromosomal linear Cluster_28 Gammaproteobacteria_gi_300825006 hallmark;refseq 32;24;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MS 119-7 extrachromosomal linear Cluster_26 Gammaproteobacteria_gi_300825092 hallmark;refseq 19;14;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MS 119-7 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_300825227 refseq 11;6;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MS 119-7 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_300825244 hallmark;refseq 15;10;5; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MS 119-7 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_300825286 refseq 9;5;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MS 119-7 extrachromosomal linear Cluster_47 Gammaproteobacteria_gi_300910334 hallmark;refseq 39;25;11;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MS 198-1 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_300913199 hallmark 17;7;4;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MS 84-1 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_300915557 hallmark;refseq 17;11;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MS 198-1 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_300915570-0-11408 hallmark;refseq 10;9;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MS 84-1 prophage linear Cluster_0 Gammaproteobacteria_gi_300915638 hallmark 26;10;13;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MS 84-1 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_300915649 hallmark;refseq 34;30;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MS 198-1 extrachromosomal linear Cluster_11 Gammaproteobacteria_gi_300916012-601-14988 hallmark;refseq 17;14;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MS 198-1 prophage linear Cluster_2 Gammaproteobacteria_gi_300921569-0-25829 hallmark;refseq;vdb 37;27;5;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MS 115-1 prophage linear Cluster_0 Gammaproteobacteria_gi_300921608 refseq 17;14;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MS 115-1 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_300921638 hallmark;refseq 40;23;4;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MS 115-1 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_300921682-26256-64220 hallmark;refseq 58;49;6;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MS 115-1 prophage linear Cluster_11 Gammaproteobacteria_gi_300927514 hallmark;refseq 22;21;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MS 182-1 extrachromosomal linear Cluster_11 Gammaproteobacteria_gi_300927523-704-18675 hallmark;refseq 21;18;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MS 182-1 prophage linear Cluster_11 Gammaproteobacteria_gi_300934732-0-36650 hallmark;refseq 52;42;7;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MS 187-1 prophage linear Cluster_1 Gammaproteobacteria_gi_300941213 hallmark;refseq 16;13;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MS 21-1 extrachromosomal linear Cluster_21 Gammaproteobacteria_gi_300941254 hallmark;refseq 33;24;4;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MS 21-1 extrachromosomal linear Cluster_11 Gammaproteobacteria_gi_300941295 hallmark;refseq 18;13;5; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MS 21-1 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_300941303 hallmark;refseq 15;9;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MS 21-1 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_300952809-11854-35397 hallmark;refseq 34;27;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MS 116-1 prophage linear Cluster_0 Gammaproteobacteria_gi_301014596-23716-27422 hallmark;noncaudo 5;4;;1 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MS 200-1 prophage linear Cluster_36 Gammaproteobacteria_gi_301014644 hallmark;noncaudo 8;4;;4 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MS 200-1 extrachromosomal linear Cluster_36 Gammaproteobacteria_gi_301016196 hallmark;refseq 18;11;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MS 200-1 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_301016200-71674-106648 hallmark;refseq 45;35;4;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MS 200-1 prophage linear Cluster_2 Gammaproteobacteria_gi_301030153 hallmark;refseq 24;22;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MS 196-1 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_301030196-94575-130232 hallmark;refseq 52;46;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MS 69-1 prophage linear Cluster_3 Gammaproteobacteria_gi_301030199 refseq 27;19;5;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MS 196-1 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_301030209 refseq 21;14;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MS 196-1 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_301030716-500-14165 hallmark;refseq 15;13;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MS 69-1 prophage linear Cluster_2 Gammaproteobacteria_gi_301030729 hallmark;refseq 55;26;18;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MS 69-1 extrachromosomal linear Cluster_26 Gammaproteobacteria_gi_301033810-210-16258 refseq 26;13;5;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MS 196-1 prophage linear Cluster_37 Gammaproteobacteria_gi_301051437-85451-115719 hallmark;refseq 31;26;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MS 185-1 prophage linear Cluster_7 Gammaproteobacteria_gi_301051441 hallmark;refseq 66;38;23;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MS 185-1 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_301051501-73326-107085 hallmark;refseq 41;34;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MS 185-1 prophage linear Cluster_0 Gammaproteobacteria_gi_301301444-236681-272556 hallmark;refseq 51;37;9;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MS 124-1 prophage linear Cluster_2 Gammaproteobacteria_gi_301301961-0-25514 hallmark;refseq 37;31;6; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MS 124-1 prophage linear Cluster_10 Gammaproteobacteria_gi_301306458-0-18670 hallmark;refseq 22;17;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MS 124-1 prophage linear Cluster_4 Gammaproteobacteria_gi_301306874 hallmark;refseq 19;9;4;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MS 124-1 extrachromosomal linear Cluster_33 Gammaproteobacteria_gi_301306953 hallmark;refseq 15;13;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MS 124-1 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_301323970-142-31587 hallmark;refseq 43;28;3;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. tomato Max13 prophage linear Cluster_256 Gammaproteobacteria_gi_301323982 hallmark;refseq 80;42;11;27 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. tomato Max13 extrachromosomal linear Cluster_405 Gammaproteobacteria_gi_301324117 hallmark;vdb 16;5;6;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. tomato Max13 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_301324169-0-23612 hallmark;refseq 33;9;11;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. tomato Max13 prophage linear Cluster_0 Gammaproteobacteria_gi_301324169-23976-56345 hallmark;refseq 40;19;9;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. tomato Max13 prophage linear Cluster_71 Gammaproteobacteria_gi_301324464 hallmark 38;9;4;25 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Punalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB056 extrachromosomal linear Cluster_66 Gammaproteobacteria_gi_301330831 hallmark;refseq 21;19;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MS 78-1 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_301330864 hallmark;refseq 31;15;2;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB058 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_301331006 hallmark;refseq 27;21;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB058 extrachromosomal linear Cluster_46 Gammaproteobacteria_gi_301332271 hallmark 24;5;3;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Punalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB059 extrachromosomal linear Cluster_66 Gammaproteobacteria_gi_301680444 hallmark;refseq 20;12;4;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MS 146-1 extrachromosomal linear Cluster_19 Gammaproteobacteria_gi_302031372 refseq 36;20;;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. tomato K40 extrachromosomal linear Cluster_405 Gammaproteobacteria_gi_302031653 refseq 10;6;1;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. tomato K40 extrachromosomal linear Cluster_71 Gammaproteobacteria_gi_302031673 hallmark;refseq 31;13;8;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. tomato K40 extrachromosomal linear Cluster_71 Gammaproteobacteria_gi_302031725 hallmark;refseq 33;18;4;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. tomato K40 extrachromosomal linear Cluster_405 Gammaproteobacteria_gi_302031734 refseq 12;7;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. tomato K40 extrachromosomal linear Cluster_47 Gammaproteobacteria_gi_302121827-40969-76805 hallmark;refseq 52;29;4;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. tomato NCPPB 1108 prophage linear Cluster_83 Gammaproteobacteria_gi_302121827-7096-40559 hallmark;refseq 43;20;10;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. tomato NCPPB 1108 prophage linear Cluster_71 Gammaproteobacteria_gi_302121906 hallmark;refseq 41;21;4;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. tomato NCPPB 1108 extrachromosomal linear Cluster_18 Gammaproteobacteria_gi_302122179 hallmark;refseq 50;20;12;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. syringae 642 extrachromosomal linear Cluster_18 Gammaproteobacteria_gi_302122387 hallmark;refseq 27;16;4;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. syringae 642 extrachromosomal linear Cluster_83 Gammaproteobacteria_gi_304398193-196379-223975 hallmark;refseq 29;25;;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Pantoea Pantoea sp. aB prophage linear Cluster_7 Gammaproteobacteria_gi_304399062 hallmark;refseq 102;56;10;36 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Pantoea Pantoea sp. aB extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_307251317 refseq 32;13;8;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Actinobacillus Actinobacillus pleuropneumoniae serovar 4 str. M62 extrachromosomal linear Cluster_293 Gammaproteobacteria_gi_307251344-12101-34614 hallmark;refseq 28;20;1;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Actinobacillus Actinobacillus pleuropneumoniae serovar 4 str. M62 prophage linear Cluster_134 Gammaproteobacteria_gi_307254298 refseq 16;8;4;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Actinobacillus Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261 extrachromosomal linear Cluster_338 Gammaproteobacteria_gi_307258129-5362-45102 hallmark;refseq 54;22;15;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Actinobacillus Actinobacillus pleuropneumoniae serovar 10 str. D13039 prophage linear Cluster_2 Gammaproteobacteria_gi_307313471-57431-88334 hallmark;refseq 47;47;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli W prophage linear Cluster_3 Gammaproteobacteria_gi_307315336 hallmark;refseq 18;16;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli W extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_308185541-2856622-2886414 hallmark;refseq 47;34;3;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Pantoea Pantoea vagans C9-1 prophage linear Cluster_0 Gammaproteobacteria_gi_309797018-137-28258 hallmark;refseq 41;32;7;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MS 145-7 prophage linear Cluster_1 Gammaproteobacteria_gi_309797357 hallmark;refseq 50;39;3;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MS 145-7 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_309797627 refseq 44;39;;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MS 145-7 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_309797878 refseq;vdb 35;25;7;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;T4likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MS 145-7 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_309798005 hallmark;refseq 24;17;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MS 145-7 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_311277332-1953685-1996496 hallmark;refseq 57;42;4;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Enterobacter Enterobacter lignolyticus SCF1 prophage linear Cluster_1 Gammaproteobacteria_gi_312964210 refseq 39;30;4;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2362-75 extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_312964261 hallmark;refseq 61;50;4;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2362-75 extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_312964329 refseq 13;11;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2362-75 extrachromosomal linear Cluster_353 Gammaproteobacteria_gi_312965221 hallmark;refseq 29;21;5;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2362-75 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_312966357-2258-14278 hallmark;refseq;vdb 13;11;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2362-75 prophage linear Cluster_1 Gammaproteobacteria_gi_312966527 hallmark;refseq 26;18;6;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2362-75 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_312969538-0-30322 hallmark;refseq 41;29;11;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 1827-70 prophage linear Cluster_1 Gammaproteobacteria_gi_313112493-5415905-5455670 hallmark;refseq 55;48;;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa 39016 prophage linear Cluster_100 Gammaproteobacteria_gi_313112493-5538857-5575721 hallmark;refseq 54;54;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa 39016 prophage linear Cluster_59 Gammaproteobacteria_gi_313112493-870458-911458 hallmark;refseq 62;38;5;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa 39016 prophage linear Cluster_83 Gammaproteobacteria_gi_31795183-62-65945 hallmark;refseq 71;64;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis prophage linear Cluster_9 Gammaproteobacteria_gi_31795333 hallmark;refseq 110;77;21;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis KIM10+ extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_319774951-456856-491660 hallmark;refseq 51;33;4;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Haemophilus Haemophilus influenzae F3047 prophage linear Cluster_0 Gammaproteobacteria_gi_319896422-419146-452969 hallmark;refseq 52;28;12;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Haemophilus Haemophilus influenzae F3031 prophage linear Cluster_21 Gammaproteobacteria_gi_320157827-918607-928792 hallmark;noncaudo 16;9;1;6 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio vulnificus MO6-24/O prophage linear Cluster_14 Gammaproteobacteria_gi_32035066 refseq 39;18;7;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Actinobacillus Actinobacillus pleuropneumoniae serovar 1 str. 4074 extrachromosomal linear Cluster_293 Gammaproteobacteria_gi_322830733-1603225-1638144 hallmark;refseq 39;29;5;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Rahnella Rahnella sp. Y9602 prophage linear Cluster_0 Gammaproteobacteria_gi_322830733-1939420-1977772 hallmark;refseq 44;38;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Rahnella Rahnella sp. Y9602 prophage linear Cluster_4 Gammaproteobacteria_gi_322830733-756714-771512 hallmark;refseq 21;18;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Rahnella Rahnella sp. Y9602 prophage linear Cluster_0 Gammaproteobacteria_gi_325271855 hallmark;refseq 36;21;3;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas sp. TJI-51 extrachromosomal linear Cluster_83 Gammaproteobacteria_gi_325272812 hallmark;refseq 35;14;3;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;T7likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas sp. TJI-51 extrachromosomal linear Cluster_58 Gammaproteobacteria_gi_325276083 hallmark;refseq 32;23;2;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas sp. TJI-51 extrachromosomal linear Cluster_93 Gammaproteobacteria_gi_325915711-0-5234 hallmark;noncaudo;vdb 10;4;1;5 Viruses;ssDNA viruses;unknown;Inoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas vesicatoria ATCC 35937 prophage linear Cluster_322 Gammaproteobacteria_gi_325921215-6428-16434 hallmark;noncaudo 14;5;;9 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas gardneri ATCC 19865 prophage linear Cluster_153 Gammaproteobacteria_gi_325928215 hallmark 10;3;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas perforans 91-118 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_327187797 hallmark;refseq 25;18;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;unknown Plautia stali symbiont extrachromosomal linear Cluster_21 Gammaproteobacteria_gi_327187809 hallmark;refseq 49;38;5;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;unknown Plautia stali symbiont extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_327187844 hallmark;refseq 19;15;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;unknown Plautia stali symbiont extrachromosomal linear Cluster_22 Gammaproteobacteria_gi_327187876 hallmark;refseq 25;15;2;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;unknown Plautia stali symbiont extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_329124276-813-45072 hallmark;refseq;vdb 60;28;14;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Haemophilus Haemophilus aegyptius ATCC 11116 prophage linear Cluster_134 Gammaproteobacteria_gi_330017557 hallmark;refseq 37;28;3;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella sp. MS 92-3 extrachromosomal linear Cluster_25 Gammaproteobacteria_gi_330024090-22-26158 hallmark;refseq 29;25;;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella sp. MS 92-3 prophage linear Cluster_7 Gammaproteobacteria_gi_330445047 hallmark;refseq 55;27;7;21 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Photobacterium Photobacterium leiognathi subsp. mandapamensis svers.1.1. extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_331006572-617-8776 noncaudo 13;4;1;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Alteromonadales;unknown;unknown gamma proteobacterium IMCC1989 prophage linear Cluster_13 Gammaproteobacteria_gi_331007131 hallmark;refseq 27;12;5;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Alteromonadales;unknown;unknown gamma proteobacterium IMCC1989 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_33151282-1177654-1188326 noncaudo 15;6;2;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;T4likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Haemophilus Haemophilus ducreyi 35000HP prophage linear Cluster_302 Gammaproteobacteria_gi_331646787 refseq 36;28;1;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli M605 extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_331649912 hallmark;refseq 66;61;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli M605 extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_331650219-297617-328642 hallmark;refseq 46;44;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli M605 prophage linear Cluster_3 Gammaproteobacteria_gi_331652735-0-32968 hallmark;refseq 42;26;12;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli M718 prophage linear Cluster_4 Gammaproteobacteria_gi_331655709 hallmark;refseq 99;80;12;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli M718 extrachromosomal circular Cluster_16 Gammaproteobacteria_gi_331665670-413901-452133 hallmark;refseq 51;32;17;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TA143 prophage linear Cluster_1 Gammaproteobacteria_gi_331667966 hallmark;refseq 31;13;10;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TA271 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_331675312-62852-95545 hallmark;refseq 41;35;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TA280 prophage linear Cluster_0 Gammaproteobacteria_gi_331676385-68809-103169 hallmark;refseq 49;38;8;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli H591 prophage linear Cluster_1 Gammaproteobacteria_gi_331677334-643038-674409 hallmark;refseq 42;32;5;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli H591 prophage linear Cluster_0 Gammaproteobacteria_gi_331680133-363199-406162 hallmark;refseq;vdb 55;32;16;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli H591 prophage linear Cluster_2 Gammaproteobacteria_gi_332139403-3518079-3551671 hallmark;refseq 45;35;6;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Pantoea Pantoea ananatis LMG 20103 prophage linear Cluster_0 Gammaproteobacteria_gi_332159624-1584617-1621273 hallmark;refseq 40;22;6;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia enterocolitica subsp. palearctica 105.5R(r) prophage linear Cluster_114 Gammaproteobacteria_gi_332159624-2078753-2108526 hallmark;refseq 45;24;11;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia enterocolitica subsp. palearctica 105.5R(r) prophage linear Cluster_0 Gammaproteobacteria_gi_332159624-2476595-2494296 hallmark;noncaudo 27;15;;12 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia enterocolitica subsp. palearctica 105.5R(r) prophage linear Cluster_36 Gammaproteobacteria_gi_332533776-15807-55385 hallmark;refseq 57;25;14;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Alteromonadales;Pseudoalteromonadaceae;Pseudoalteromonas Pseudoalteromonas haloplanktis ANT/505 prophage linear Cluster_0 Gammaproteobacteria_gi_332534027-6866-51616 hallmark 59;19;16;24 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Alteromonadales;Pseudoalteromonadaceae;Pseudoalteromonas Pseudoalteromonas haloplanktis ANT/505 prophage linear Cluster_3 Gammaproteobacteria_gi_332534094 hallmark 72;20;4;48 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Alteromonadales;Pseudoalteromonadaceae;Pseudoalteromonas Pseudoalteromonas haloplanktis ANT/505 extrachromosomal linear Cluster_126 Gammaproteobacteria_gi_333054691 hallmark 17;7;1;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii 6013150 extrachromosomal linear Cluster_93 Gammaproteobacteria_gi_333069142-7230-43501 hallmark;refseq 50;30;8;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii 6013150 prophage linear Cluster_122 Gammaproteobacteria_gi_333069149 hallmark;refseq 31;16;1;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii 6013150 extrachromosomal linear Cluster_93 Gammaproteobacteria_gi_333069152 hallmark;refseq 52;29;7;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii 6013150 extrachromosomal linear Cluster_24 Gammaproteobacteria_gi_333069176 hallmark 51;10;4;37 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Punalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii 6013150 extrachromosomal linear Cluster_66 Gammaproteobacteria_gi_333069422 hallmark;refseq 42;28;6;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii 6013113 extrachromosomal linear Cluster_24 Gammaproteobacteria_gi_333924895-878261-896106 hallmark;refseq 22;18;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Serratia Serratia sp. AS12 prophage linear Cluster_0 Gammaproteobacteria_gi_333929848-878446-896291 hallmark;refseq 22;18;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Serratia Serratia plymuthica AS9 prophage linear Cluster_0 Gammaproteobacteria_gi_334126447-1347522-1396523 hallmark;refseq 75;59;6;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Enterobacter Enterobacter hormaechei ATCC 49162 prophage linear Cluster_134 Gammaproteobacteria_gi_334363766-7559-31422 hallmark;refseq 34;15;6;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Aeromonadales;Aeromonadaceae;Aeromonas Aeromonas caviae Ae398 prophage linear Cluster_3 Gammaproteobacteria_gi_339998036-3085001-3115187 hallmark;refseq 39;32;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella bongori NCTC 12419 prophage linear Cluster_0 Gammaproteobacteria_gi_343504309-13209-22216 hallmark;refseq 15;10;1;4 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio ichthyoenteri ATCC 700023 prophage linear Cluster_14 Gammaproteobacteria_gi_343506764 hallmark 25;7;7;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio ichthyoenteri ATCC 700023 extrachromosomal linear Cluster_22 Gammaproteobacteria_gi_343508076-33482-43245 refseq 12;8;;4 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio ichthyoenteri ATCC 700023 prophage linear Cluster_130 Gammaproteobacteria_gi_343509570 hallmark;refseq 45;28;7;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio scophthalmi LMG 19158 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_345301759 hallmark;refseq 38;25;6;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Enterobacter Enterobacter asburiae LF7a extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_345879247 refseq 19;7;;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;unknown;unknown;unknown endosymbiont of Riftia pachyptila (vent Ph05) extrachromosomal linear Cluster_425 Gammaproteobacteria_gi_349703141-0-12072 refseq 16;9;1;6 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio rotiferianus DAT722 prophage linear Cluster_14 Gammaproteobacteria_gi_349703176 refseq 8;6;;2 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio rotiferianus DAT722 extrachromosomal linear Cluster_130 Gammaproteobacteria_gi_354697327-944224-982829 hallmark;refseq 53;40;4;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Enterobacter Enterobacter mori LMG 25706 prophage linear Cluster_2 Gammaproteobacteria_gi_354697329-473969-512294 hallmark;refseq 49;40;4;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Enterobacter Enterobacter mori LMG 25706 prophage linear Cluster_4 Gammaproteobacteria_gi_355654227-1775741-1825339 hallmark;refseq 65;40;6;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas sp. 2_1_26 prophage linear Cluster_120 Gammaproteobacteria_gi_355654498-62107-70749 noncaudo 13;9;1;3 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas sp. 2_1_26 prophage linear Cluster_13 Gammaproteobacteria_gi_357631907 hallmark;refseq 34;15;1;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter sp. P8-3-8 extrachromosomal linear Cluster_93 Gammaproteobacteria_gi_357631912 hallmark;refseq 22;13;2;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter sp. P8-3-8 extrachromosomal linear Cluster_24 Gammaproteobacteria_gi_359428169 hallmark;refseq 59;26;10;23 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter sp. NBRC 100985 extrachromosomal linear Cluster_369 Gammaproteobacteria_gi_359435334 hallmark 44;14;13;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Alteromonadales;Pseudoalteromonadaceae;Pseudoalteromonas Pseudoalteromonas sp. BSi20652 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_359437531-10149-70077 hallmark;refseq 74;23;25;26 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Alteromonadales;Pseudoalteromonadaceae;Pseudoalteromonas Pseudoalteromonas sp. BSi20311 prophage linear Cluster_0 Gammaproteobacteria_gi_359446497 hallmark;noncaudo 8;4;1;3 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Alteromonadales;Pseudoalteromonadaceae;Pseudoalteromonas Pseudoalteromonas sp. BSi20439 extrachromosomal linear Cluster_14 Gammaproteobacteria_gi_359453661 hallmark;refseq 48;18;10;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Alteromonadales;Pseudoalteromonadaceae;Pseudoalteromonas Pseudoalteromonas sp. BSi20495 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_359783938 hallmark;refseq 51;27;8;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas psychrotolerans L19 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_360034408-1041584-1051380 refseq 13;12;1; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae O1 str. 2010EL-1786 prophage linear Cluster_12 Gammaproteobacteria_gi_365149417-299894-322488 hallmark;refseq 33;19;3;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella sp. 4_1_44FAA prophage linear Cluster_37 Gammaproteobacteria_gi_365838771 hallmark;refseq 28;24;1;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Hafnia Hafnia alvei ATCC 51873 extrachromosomal linear Cluster_23 Gammaproteobacteria_gi_365838815 hallmark;refseq 80;47;16;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Hafnia Hafnia alvei ATCC 51873 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_365838825 hallmark;refseq 29;18;5;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Hafnia Hafnia alvei ATCC 51873 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_365919610-1870654-1916959 hallmark;refseq 70;51;6;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yokenella Yokenella regensburgei ATCC 43003 prophage linear Cluster_25 Gammaproteobacteria_gi_365922865-48885-84155 hallmark;refseq 53;22;11;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Cardiobacteriales;Cardiobacteriaceae;Cardiobacterium Cardiobacterium valvarum F0432 prophage linear Cluster_39 Gammaproteobacteria_gi_365926852-0-23125 hallmark;refseq 24;17;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia sp. TW09308 prophage linear Cluster_11 Gammaproteobacteria_gi_365926852-827704-857293 hallmark;refseq 41;36;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia sp. TW09308 prophage linear Cluster_0 Gammaproteobacteria_gi_372136950 hallmark 20;6;5;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Alteromonadales;Alteromonadaceae;Marinobacterium Marinobacterium stanieri S30 extrachromosomal linear Cluster_311 Gammaproteobacteria_gi_372136978 hallmark;refseq 42;23;9;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Alteromonadales;Alteromonadaceae;Marinobacterium Marinobacterium stanieri S30 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_372137343-176307-197152 hallmark;refseq 31;27;1;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Pantoea Pantoea sp. SL1_M5 prophage linear Cluster_0 Gammaproteobacteria_gi_374259645 hallmark 56;16;8;32 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas sp. S9 extrachromosomal linear Cluster_249 Gammaproteobacteria_gi_374259649 refseq 5;4;;1 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas sp. S9 extrachromosomal linear Cluster_13 Gammaproteobacteria_gi_374333820-2238585-2245997 noncaudo 10;5;1;4 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Aeromonadales;Aeromonadaceae;Oceanimonas Oceanimonas sp. GK1 prophage linear Cluster_14 Gammaproteobacteria_gi_374683958-75121-96986 hallmark 34;13;3;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Aeromonadales;Succinivibrionaceae;unknown Succinivibrionaceae bacterium WG-1 prophage linear Cluster_3 Gammaproteobacteria_gi_374683971-0-19856 hallmark 24;7;3;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Aeromonadales;Succinivibrionaceae;unknown Succinivibrionaceae bacterium WG-1 prophage linear Cluster_42 Gammaproteobacteria_gi_374683972 hallmark 25;8;6;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Aeromonadales;Succinivibrionaceae;unknown Succinivibrionaceae bacterium WG-1 extrachromosomal linear Cluster_42 Gammaproteobacteria_gi_374979381 refseq 24;20;;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_374981863-119-29162 hallmark;refseq 28;26;2; Viruses;unclassified phages;;;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786 prophage linear Cluster_1 Gammaproteobacteria_gi_375108294 hallmark 44;14;7;23 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Alteromonadales;Alteromonadaceae;Alishewanella Alishewanella jeotgali KCTC 22429 extrachromosomal linear Cluster_21 Gammaproteobacteria_gi_375108338-120915-129743 hallmark;noncaudo 12;4;1;7 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Alteromonadales;Alteromonadaceae;Alishewanella Alishewanella jeotgali KCTC 22429 prophage linear Cluster_14 Gammaproteobacteria_gi_375111432-2892-38502 hallmark;refseq 45;21;10;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Alteromonadales;Alteromonadaceae;Alishewanella Alishewanella jeotgali KCTC 22429 prophage linear Cluster_3 Gammaproteobacteria_gi_375117430-2923320-2958107 hallmark;refseq 43;35;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Dublin str. SD3246 prophage linear Cluster_0 Gammaproteobacteria_gi_37524032-10226-30012 hallmark;refseq 24;22;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Photorhabdus Photorhabdus luminescens subsp. laumondii TTO1 prophage linear Cluster_0 Gammaproteobacteria_gi_375256816-3813342-3857583 hallmark;refseq 46;34;3;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella oxytoca KCTC 1686 prophage linear Cluster_4 Gammaproteobacteria_gi_377520096-1937563-1970946 hallmark;refseq 59;32;21;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella sonnei 53G prophage linear Cluster_19 Gammaproteobacteria_gi_377520096-3017503-3078611 hallmark;refseq 52;37;14;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella sonnei 53G prophage linear Cluster_19 Gammaproteobacteria_gi_377520096-4442086-4474033 hallmark;refseq 41;33;7;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella sonnei 53G prophage linear Cluster_0 Gammaproteobacteria_gi_377575845-190669-239930 hallmark;refseq 83;55;7;21 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia hermannii NBRC 105704 prophage linear Cluster_25 Gammaproteobacteria_gi_378443454-2753355-2803497 hallmark;refseq 59;53;2;4 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 prophage linear Cluster_1 Gammaproteobacteria_gi_378443454-3370742-3401392 hallmark;refseq 40;35;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 prophage linear Cluster_0 Gammaproteobacteria_gi_378448274-2780528-2830675 hallmark;refseq 60;53;3;4 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S prophage linear Cluster_1 Gammaproteobacteria_gi_378578251-30958-56779 hallmark;refseq 44;26;6;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Pantoea Pantoea stewartii subsp. stewartii DC283 prophage linear Cluster_37 Gammaproteobacteria_gi_378578251-73756-99593 hallmark;refseq 37;23;3;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Pantoea Pantoea stewartii subsp. stewartii DC283 prophage linear Cluster_0 Gammaproteobacteria_gi_378579053-144688-201355 hallmark;refseq 91;37;20;34 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Pantoea Pantoea stewartii subsp. stewartii DC283 prophage linear Cluster_28 Gammaproteobacteria_gi_378582731 hallmark;refseq 61;28;14;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Pantoea Pantoea stewartii subsp. stewartii DC283 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_378582795-2576-30650 hallmark;refseq 40;29;9;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Pantoea Pantoea stewartii subsp. stewartii DC283 prophage linear Cluster_21 Gammaproteobacteria_gi_378696079-1766164-1795166 hallmark;refseq 40;25;5;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Haemophilus Haemophilus influenzae 10810 prophage linear Cluster_44 Gammaproteobacteria_gi_378697983-2726692-2777254 hallmark;refseq 60;57;3; Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 prophage linear Cluster_1 Gammaproteobacteria_gi_378710836-1768255-1798802 hallmark;refseq 41;34;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KO11FL prophage linear Cluster_0 Gammaproteobacteria_gi_378710836-4662111-4694265 hallmark;refseq 41;35;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KO11FL prophage linear Cluster_0 Gammaproteobacteria_gi_378760355-17769-33455 noncaudo 17;5;2;10 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas sacchari NCPPB 4393 prophage linear Cluster_153 Gammaproteobacteria_gi_378760357-8358-14535 hallmark;vdb 5;2;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Yualikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas sacchari NCPPB 4393 prophage linear Cluster_91 Gammaproteobacteria_gi_378764971-661793-685004 hallmark;refseq 28;27;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Pantoea Pantoea ananatis LMG 5342 prophage linear Cluster_0 Gammaproteobacteria_gi_378958130-3489740-3523297 hallmark;refseq 45;34;5;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12 prophage linear Cluster_0 Gammaproteobacteria_gi_378975690-35748-122824 hallmark;refseq 97;79;10;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae HS11286 prophage linear Cluster_9 Gammaproteobacteria_gi_378976159-4049962-4084784 hallmark;refseq 44;34;5;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae HS11286 prophage linear Cluster_0 Gammaproteobacteria_gi_378982542-2724401-2772242 hallmark;refseq 56;54;2; Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. T000240 prophage linear Cluster_1 Gammaproteobacteria_gi_378987404-2728739-2778927 hallmark;refseq 57;53;4; Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1 prophage linear Cluster_1 Gammaproteobacteria_gi_379699217-2726692-2777254 hallmark;refseq 60;57;3; Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74 prophage linear Cluster_1 Gammaproteobacteria_gi_379739908-1561474-1571566 hallmark;refseq 14;12;1;1 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae IEC224 prophage linear Cluster_12 Gammaproteobacteria_gi_379739908-1606347-1649182 hallmark;refseq 52;24;;28 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae IEC224 prophage linear Cluster_248 Gammaproteobacteria_gi_381173609-619-7630 hallmark;noncaudo 8;5;3; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas citri pv. mangiferaeindicae LMG 941 prophage linear Cluster_153 Gammaproteobacteria_gi_381402589-11793-41622 hallmark;refseq 37;28;5;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Pantoea Pantoea sp. Sc1 prophage linear Cluster_0 Gammaproteobacteria_gi_383187966-1610200-1640617 hallmark;refseq 37;29;6;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Rahnella Rahnella aquatilis CIP 78.65 = ATCC 33071 prophage linear Cluster_0 Gammaproteobacteria_gi_383187966-783646-798492 hallmark;refseq 21;18;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Rahnella Rahnella aquatilis CIP 78.65 = ATCC 33071 prophage linear Cluster_0 Gammaproteobacteria_gi_383494824-2726059-2776207 hallmark;refseq 60;53;2;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. 798 prophage linear Cluster_1 Gammaproteobacteria_gi_383817333 hallmark;refseq 26;16;2;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Serratia Serratia sp. M24T3 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_383817415 hallmark;refseq 16;13;;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Serratia Serratia sp. M24T3 extrachromosomal linear Cluster_64 Gammaproteobacteria_gi_384124222-62-65878 hallmark;refseq;vdb 70;63;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis D106004 prophage linear Cluster_9 Gammaproteobacteria_gi_384124388-62-67737 hallmark;refseq;vdb 72;64;6;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis D182038 prophage linear Cluster_9 Gammaproteobacteria_gi_384129960-1467048-1503647 hallmark;refseq 50;32;5;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii 1656-2 prophage linear Cluster_122 Gammaproteobacteria_gi_384141139 hallmark;refseq 100;68;23;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis A1122 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_384255905-1556141-1588943 hallmark;refseq 38;29;5;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Rahnella Rahnella aquatilis HX2 prophage linear Cluster_0 Gammaproteobacteria_gi_384255905-718847-733645 hallmark;refseq 21;18;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Rahnella Rahnella aquatilis HX2 prophage linear Cluster_0 Gammaproteobacteria_gi_384416964 hallmark;refseq 105;74;21;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis biovar Medievalis str. Harbin 35 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_384425691-2459236-2469751 hallmark;noncaudo 13;9;1;3 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas campestris pv. raphani 756C prophage linear Cluster_366 Gammaproteobacteria_gi_384541581-306986-350684 hallmark;refseq 66;56;6;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella flexneri 2002017 prophage linear Cluster_19 Gammaproteobacteria_gi_386056071-4758448-4769484 noncaudo 14;8;1;5 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa M18 prophage linear Cluster_13 Gammaproteobacteria_gi_386056071-5282555-5295806 noncaudo 17;11;;6 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa M18 prophage linear Cluster_13 Gammaproteobacteria_gi_386062973-1698545-1740400 hallmark;refseq 63;41;5;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa NCGM2.S1 prophage linear Cluster_83 Gammaproteobacteria_gi_386083114-1573852-1588909 hallmark;refseq 23;18;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xylella Xylella fastidiosa subsp. fastidiosa GB514 prophage linear Cluster_0 Gammaproteobacteria_gi_386307442-2917245-2940754 hallmark;refseq 25;16;5;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia enterocolitica subsp. palearctica Y11 prophage linear Cluster_0 Gammaproteobacteria_gi_386326719-878257-896102 hallmark;refseq 22;18;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Serratia Serratia sp. AS13 prophage linear Cluster_0 Gammaproteobacteria_gi_386338936-2619304-2627750 hallmark;noncaudo 13;3;2;8 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Alteromonadales;Shewanellaceae;Shewanella Shewanella baltica OS117 prophage linear Cluster_14 Gammaproteobacteria_gi_386388679 hallmark;refseq 19;10;7;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Haemophilus Haemophilus paraphrohaemolyticus HK411 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_386389050 hallmark;refseq 64;30;16;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Haemophilus Haemophilus paraphrohaemolyticus HK411 extrachromosomal linear Cluster_21 Gammaproteobacteria_gi_386389790 hallmark;refseq 22;15;3;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Haemophilus Haemophilus paraphrohaemolyticus HK411 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_386597751-2105338-2155736 hallmark;refseq;vdb 59;34;19;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli IHE3034 prophage linear Cluster_4 Gammaproteobacteria_gi_386597751-2880152-2920121 hallmark;refseq 55;48;2;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli IHE3034 prophage linear Cluster_7 Gammaproteobacteria_gi_386597751-965582-998589 hallmark;refseq 43;37;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli IHE3034 prophage linear Cluster_0 Gammaproteobacteria_gi_386602643-1980756-1989532 hallmark;noncaudo 14;7;;7 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UM146 prophage linear Cluster_36 Gammaproteobacteria_gi_386607309-2307174-2337602 hallmark;refseq 41;34;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli W prophage linear Cluster_0 Gammaproteobacteria_gi_386607309-4331978-4364132 hallmark;refseq 42;35;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli W prophage linear Cluster_0 Gammaproteobacteria_gi_386612163-2814536-2856520 hallmark;refseq 64;51;5;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMNK88 prophage linear Cluster_11 Gammaproteobacteria_gi_386612163-294934-328684 hallmark;refseq 52;41;6;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMNK88 prophage linear Cluster_3 Gammaproteobacteria_gi_386612163-3000276-3041314 hallmark;refseq 55;49;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMNK88 prophage linear Cluster_7 Gammaproteobacteria_gi_386612163-3168188-3204378 hallmark;refseq 52;44;4;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMNK88 prophage linear Cluster_4 Gammaproteobacteria_gi_386617516-909009-933964 hallmark;refseq 29;21;5;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli NA114 prophage linear Cluster_0 Gammaproteobacteria_gi_386622414-1761158-1789331 hallmark;refseq 37;30;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O7:K1 str. CE10 prophage linear Cluster_0 Gammaproteobacteria_gi_386622414-1811860-1841775 hallmark;refseq 33;24;6;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O7:K1 str. CE10 prophage linear Cluster_1 Gammaproteobacteria_gi_386622414-2937608-2978783 hallmark;refseq 52;46;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O7:K1 str. CE10 prophage linear Cluster_7 Gammaproteobacteria_gi_386622414-4818567-4832677 hallmark;refseq 18;15;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O7:K1 str. CE10 prophage linear Cluster_22 Gammaproteobacteria_gi_386627502-1300638-1376416 hallmark;refseq 100;56;38;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli str. 'clone D i2' prophage linear Cluster_1 Gammaproteobacteria_gi_386698504-2618577-2649127 hallmark;refseq 41;34;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KO11FL prophage linear Cluster_0 Gammaproteobacteria_gi_386698504-3185335-3210110 hallmark;refseq;vdb 27;22;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KO11FL prophage linear Cluster_1 Gammaproteobacteria_gi_386698504-614609-646763 hallmark;refseq 41;35;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KO11FL prophage linear Cluster_0 Gammaproteobacteria_gi_386703215-1189705-1228610 hallmark;refseq 61;52;6;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P12b prophage linear Cluster_11 Gammaproteobacteria_gi_386703215-2657094-2696252 hallmark;refseq 60;54;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P12b prophage linear Cluster_11 Gammaproteobacteria_gi_386707734-2303629-2334179 hallmark;refseq 41;34;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli W prophage linear Cluster_0 Gammaproteobacteria_gi_386707734-4328459-4360613 hallmark;refseq 41;35;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli W prophage linear Cluster_0 Gammaproteobacteria_gi_386716467-2420236-2427476 noncaudo 14;8;1;5 Viruses;ssDNA viruses;unknown;Inoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Stenotrophomonas Stenotrophomonas maltophilia D457 prophage linear Cluster_43 Gammaproteobacteria_gi_387122089-1575025-1616396 hallmark;refseq 65;31;15;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii MDR-TJ prophage linear Cluster_28 Gammaproteobacteria_gi_387134041 hallmark;refseq 59;40;9;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Edwardsiella Edwardsiella tarda FL6-60 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_387504721 hallmark;refseq 105;93;6;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O55:H7 str. RM12579 extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_387504934-1580173-1616922 hallmark;refseq 44;34;7;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O55:H7 str. RM12579 prophage linear Cluster_4 Gammaproteobacteria_gi_387504934-1731745-1771137 hallmark;refseq 48;31;12;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O55:H7 str. RM12579 prophage linear Cluster_10 Gammaproteobacteria_gi_387504934-301255-359995 hallmark;refseq 76;51;22;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O55:H7 str. RM12579 prophage linear Cluster_1 Gammaproteobacteria_gi_387605479-1535661-1579661 hallmark;refseq 49;30;12;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 042 prophage linear Cluster_26 Gammaproteobacteria_gi_387605479-878981-914156 hallmark;refseq 58;56;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 042 prophage linear Cluster_3 Gammaproteobacteria_gi_387610477-2839084-2883863 hallmark;refseq 60;51;1;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli ETEC H10407 prophage linear Cluster_7 Gammaproteobacteria_gi_387610477-4685534-4723747 hallmark;refseq 56;47;6;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli ETEC H10407 prophage linear Cluster_3 Gammaproteobacteria_gi_387610477-855768-907753 hallmark;refseq 66;48;11;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli ETEC H10407 prophage linear Cluster_142 Gammaproteobacteria_gi_387615344-1595201-1618878 hallmark;refseq 24;19;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O83:H1 str. NRG 857C prophage linear Cluster_2 Gammaproteobacteria_gi_387615344-996498-1034595 hallmark;refseq 57;50;3;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O83:H1 str. NRG 857C prophage linear Cluster_11 Gammaproteobacteria_gi_387769074-0-11660 hallmark;refseq 20;14;;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Pasteurella Pasteurella bettyae CCUG 2042 prophage linear Cluster_0 Gammaproteobacteria_gi_387769260 refseq 21;11;1;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Pasteurella Pasteurella bettyae CCUG 2042 extrachromosomal linear Cluster_72 Gammaproteobacteria_gi_387770170 hallmark;refseq 24;18;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Pasteurella Pasteurella bettyae CCUG 2042 extrachromosomal linear Cluster_44 Gammaproteobacteria_gi_387880559-1247056-1310115 hallmark;refseq 79;75;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli Xuzhou21 prophage linear Cluster_5 Gammaproteobacteria_gi_389686655-1354908-1426703 hallmark;refseq 100;64;15;21 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas chlororaphis O6 prophage linear Cluster_85 Gammaproteobacteria_gi_389705939-0-64687 hallmark;refseq 75;34;5;36 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter sp. HA prophage linear Cluster_519 Gammaproteobacteria_gi_389708617 hallmark;refseq 81;29;13;39 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter sp. HA extrachromosomal linear Cluster_24 Gammaproteobacteria_gi_390991443-618-35923 hallmark;refseq 48;27;4;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas axonopodis pv. punicae str. LMG 859 prophage linear Cluster_0 Gammaproteobacteria_gi_391227518-3944369-3981624 hallmark;refseq 53;37;6;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas synxantha BG33R prophage linear Cluster_21 Gammaproteobacteria_gi_392419087-1476838-1518279 hallmark;refseq 55;29;4;22 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas stutzeri CCUG 29243 prophage linear Cluster_217 Gammaproteobacteria_gi_392976867-2693346-2733176 hallmark;refseq 52;33;10;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Enterobacter Enterobacter cloacae subsp. dissolvens SDM prophage linear Cluster_82 Gammaproteobacteria_gi_394743162-165631-202524 hallmark;refseq 55;30;3;22 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas extremaustralis 14-3 substr. 14-3b prophage linear Cluster_83 Gammaproteobacteria_gi_394743213-110825-143978 hallmark;refseq 45;30;8;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas extremaustralis 14-3 substr. 14-3b prophage linear Cluster_72 Gammaproteobacteria_gi_394743888 hallmark 49;14;10;25 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas extremaustralis 14-3 substr. 14-3b extrachromosomal linear Cluster_85 Gammaproteobacteria_gi_394743925 hallmark;refseq 41;27;3;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas extremaustralis 14-3 substr. 14-3b extrachromosomal linear Cluster_137 Gammaproteobacteria_gi_394743960 hallmark;refseq 30;16;6;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas extremaustralis 14-3 substr. 14-3b extrachromosomal linear Cluster_18 Gammaproteobacteria_gi_394749239-18573-43599 hallmark;refseq 33;24;5;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas sp. PAMC 25886 prophage linear Cluster_85 Gammaproteobacteria_gi_395229378-246013-294130 hallmark;refseq 59;48;2;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Citrobacter Citrobacter sp. A1 prophage linear Cluster_1 Gammaproteobacteria_gi_395230352-0-30538 hallmark;refseq 46;38;1;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Citrobacter Citrobacter sp. A1 prophage linear Cluster_4 Gammaproteobacteria_gi_395794507 hallmark;refseq 73;33;7;33 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas sp. Ag1 extrachromosomal linear Cluster_18 Gammaproteobacteria_gi_395795648-37909-52700 hallmark;refseq 18;13;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas sp. Ag1 prophage linear Cluster_85 Gammaproteobacteria_gi_397655102-4144569-4177060 hallmark;refseq 42;35;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella oxytoca E718 prophage linear Cluster_0 Gammaproteobacteria_gi_397685123-3240733-3251043 noncaudo 16;5;1;10 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas stutzeri DSM 10701 prophage linear Cluster_414 Gammaproteobacteria_gi_398790687 hallmark;refseq 46;19;7;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Spbetalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Pantoea Pantoea sp. YR343 extrachromosomal linear Cluster_351 Gammaproteobacteria_gi_398795717-3801-20722 refseq 24;14;;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Pantoea Pantoea sp. YR343 prophage linear Cluster_561 Gammaproteobacteria_gi_398801980-0-10260 refseq;vdb 18;11;;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Pantoea Pantoea sp. GM01 prophage linear Cluster_7 Gammaproteobacteria_gi_398848570 hallmark;refseq;vdb 84;40;20;24 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas sp. GM84 extrachromosomal linear Cluster_64 Gammaproteobacteria_gi_398849263 hallmark;refseq 81;28;15;38 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas sp. GM80 extrachromosomal linear Cluster_18 Gammaproteobacteria_gi_398849380-94-40488 hallmark;refseq;vdb 50;23;14;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas sp. GM80 prophage linear Cluster_85 Gammaproteobacteria_gi_398854951-26167-64134 hallmark;vdb 48;18;12;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas sp. GM80 prophage linear Cluster_0 Gammaproteobacteria_gi_398861947-602-56335 hallmark;refseq 82;35;14;33 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas sp. GM79 prophage linear Cluster_18 Gammaproteobacteria_gi_398863743-21174-47295 hallmark;refseq 45;19;3;23 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas sp. GM78 prophage linear Cluster_264 Gammaproteobacteria_gi_398866602 hallmark;refseq 15;10;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas sp. GM78 extrachromosomal linear Cluster_83 Gammaproteobacteria_gi_398911980 hallmark;refseq 48;29;4;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas sp. GM49 extrachromosomal linear Cluster_64 Gammaproteobacteria_gi_398976734-139445-181834 hallmark;refseq;vdb 47;27;12;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas sp. GM25 prophage linear Cluster_85 Gammaproteobacteria_gi_399005738 hallmark;refseq 29;14;6;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas sp. GM17 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_399006139-36508-73108 hallmark;refseq;vdb 42;27;10;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas sp. GM17 prophage linear Cluster_85 Gammaproteobacteria_gi_401677934-15678-25932 hallmark;refseq 12;12;; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Enterobacter Enterobacter sp. SST3 prophage linear Cluster_0 Gammaproteobacteria_gi_402295227 hallmark;refseq 69;28;13;28 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter parvus DSM 16617 = CIP 108168 extrachromosomal linear Cluster_169 Gammaproteobacteria_gi_402295304 noncaudo 12;2;2;8 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter parvus DSM 16617 = CIP 108168 extrachromosomal circular Cluster_417 Gammaproteobacteria_gi_402295634 hallmark;refseq 43;18;4;21 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter sp. NCTC 10304 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_402295635 refseq 51;18;7;26 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter sp. NCTC 10304 extrachromosomal linear Cluster_53 Gammaproteobacteria_gi_402295640 hallmark;refseq 48;29;1;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter sp. NCTC 10304 extrachromosomal linear Cluster_299 Gammaproteobacteria_gi_402295644 hallmark;refseq 47;21;10;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter sp. NCTC 10304 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_402295713 hallmark;refseq 21;18;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter sp. NCTC 10304 extrachromosomal linear Cluster_24 Gammaproteobacteria_gi_402295733 hallmark;refseq 15;9;1;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter sp. NCTC 10304 extrachromosomal linear Cluster_24 Gammaproteobacteria_gi_402295758 noncaudo 14;2;2;10 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter sp. NCTC 10304 extrachromosomal linear Cluster_165 Gammaproteobacteria_gi_402296057 hallmark 40;9;12;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter bereziniae LMG 1003 extrachromosomal linear Cluster_169 Gammaproteobacteria_gi_402296097 hallmark 33;10;5;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Tunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter bereziniae LMG 1003 extrachromosomal linear Cluster_369 Gammaproteobacteria_gi_402296101 hallmark 25;10;1;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter bereziniae LMG 1003 extrachromosomal linear Cluster_114 Gammaproteobacteria_gi_402296102 hallmark 29;11;5;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter bereziniae LMG 1003 extrachromosomal linear Cluster_210 Gammaproteobacteria_gi_402296114 hallmark 23;7;2;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter bereziniae LMG 1003 extrachromosomal linear Cluster_210 Gammaproteobacteria_gi_402296116 hallmark 21;5;4;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Tunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter bereziniae LMG 1003 extrachromosomal linear Cluster_169 Gammaproteobacteria_gi_402296518 hallmark;refseq 98;40;23;35 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas fragi A22 extrachromosomal linear Cluster_18 Gammaproteobacteria_gi_402296789 noncaudo 8;2;1;5 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;unknown;unknown;unknown SAR86 cluster bacterium SAR86C extrachromosomal linear unclustered Gammaproteobacteria_gi_402842047-140304-156036 hallmark;refseq 15;14;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella sp. OBRC7 prophage linear Cluster_4 Gammaproteobacteria_gi_403962775 hallmark;vdb 27;7;7;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas fuscovaginae UPB0736 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_406351895-60302-93133 hallmark;refseq 39;32;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia sp. 1_1_43 prophage linear Cluster_0 Gammaproteobacteria_gi_406839693 hallmark;refseq 33;21;7;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cyclitrophicus ZF14 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_407021224-1584342-1605274 hallmark;refseq 30;27;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Kosakonia Kosakonia radicincitans DSM 16656 prophage linear Cluster_0 Gammaproteobacteria_gi_407021225-2278261-2328024 hallmark;refseq 63;46;4;13 Viruses;unclassified;unclassified;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Kosakonia Kosakonia radicincitans DSM 16656 prophage linear Cluster_137 Gammaproteobacteria_gi_407466711-2145618-2195121 hallmark;refseq 61;46;13;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 2009EL-2071 prophage linear Cluster_1 Gammaproteobacteria_gi_407466711-2522995-2582469 hallmark;refseq 73;55;8;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 2009EL-2071 prophage linear Cluster_5 Gammaproteobacteria_gi_407466711-3306493-3366629 hallmark;refseq 69;68;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 2009EL-2071 prophage linear Cluster_5 Gammaproteobacteria_gi_407466711-3631504-3673987 hallmark;refseq 57;43;10;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 2009EL-2071 prophage linear Cluster_1 Gammaproteobacteria_gi_407479587-2148610-2196792 hallmark;refseq 63;46;13;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 2011C-3493 prophage linear Cluster_1 Gammaproteobacteria_gi_407479587-2525770-2585244 hallmark;refseq 70;54;8;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 2011C-3493 prophage linear Cluster_5 Gammaproteobacteria_gi_407479587-3256612-3317008 hallmark;refseq 71;70;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 2011C-3493 prophage linear Cluster_5 Gammaproteobacteria_gi_407479587-3581877-3624360 hallmark;refseq 57;43;10;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 2011C-3493 prophage linear Cluster_1 Gammaproteobacteria_gi_407794996 hallmark;refseq 23;11;2;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Alteromonadales;Idiomarinaceae;Idiomarina Idiomarina xiamenensis 10-D-4 extrachromosomal linear Cluster_101 Gammaproteobacteria_gi_407795020 hallmark 26;12;4;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Alteromonadales;Idiomarinaceae;Idiomarina Idiomarina xiamenensis 10-D-4 extrachromosomal linear Cluster_81 Gammaproteobacteria_gi_409167369 hallmark 50;18;8;24 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Alteromonadales;Pseudoalteromonadaceae;Pseudoalteromonas Pseudoalteromonas flavipulchra JG1 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_409167409-274568-285664 hallmark;noncaudo 19;12;;7 Viruses;dsDNA viruses no RNA stage;unknown;Corticoviridae;Corticovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Alteromonadales;Pseudoalteromonadaceae;Pseudoalteromonas Pseudoalteromonas flavipulchra JG1 prophage linear Cluster_453 Gammaproteobacteria_gi_409167671-32543-45509 hallmark;refseq;vdb 13;10;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas sp. HYS prophage linear Cluster_0 Gammaproteobacteria_gi_409167680 hallmark;refseq 81;33;9;39 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas sp. HYS extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_409249673 hallmark;refseq 23;21;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_409249695-19653-64303 hallmark;refseq 54;49;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1 prophage linear Cluster_2 Gammaproteobacteria_gi_410090155-52825-79063 hallmark;vdb 35;14;10;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas viridiflava UASWS0038 prophage linear Cluster_0 Gammaproteobacteria_gi_410480139-2137928-2187425 hallmark;refseq 66;48;14;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 2009EL-2050 prophage linear Cluster_1 Gammaproteobacteria_gi_410480139-2515299-2574773 hallmark;refseq 74;55;8;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 2009EL-2050 prophage linear Cluster_5 Gammaproteobacteria_gi_410480139-3248868-3309004 hallmark;refseq 69;68;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 2009EL-2050 prophage linear Cluster_5 Gammaproteobacteria_gi_410480139-3573880-3616363 hallmark;refseq 57;43;10;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 2009EL-2050 prophage linear Cluster_1 Gammaproteobacteria_gi_410485110-7659-91304 hallmark;refseq 100;83;8;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 2009EL-2050 prophage linear Cluster_9 Gammaproteobacteria_gi_410591379-525040-534994 noncaudo 11;5;2;4 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Aeromonadales;Aeromonadaceae;Aeromonas Aeromonas dhakensis AAK1 prophage linear Cluster_266 Gammaproteobacteria_gi_410591407-12916-45167 hallmark;refseq 44;39;;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Aeromonadales;Aeromonadaceae;Aeromonas Aeromonas dhakensis AAK1 prophage linear Cluster_0 Gammaproteobacteria_gi_410685988 hallmark;refseq 11;8;;3 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cincinnatiensis extrachromosomal linear Cluster_14 Gammaproteobacteria_gi_414071335-1273-11624 noncaudo;vdb 16;3;;13 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Alteromonadales;Pseudoalteromonadaceae;Pseudoalteromonas Pseudoalteromonas sp. Bsw20308 prophage linear Cluster_560 Gammaproteobacteria_gi_414071926 hallmark;refseq 52;20;13;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Alteromonadales;Pseudoalteromonadaceae;Pseudoalteromonas Pseudoalteromonas sp. Bsw20308 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_414561716-2788286-2822865 hallmark;refseq 53;36;6;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Alteromonadales;Shewanellaceae;Shewanella Shewanella oneidensis MR-1 prophage linear Cluster_3 Gammaproteobacteria_gi_414574989 hallmark;refseq 23;13;9;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella sonnei 3233-85 extrachromosomal linear Cluster_19 Gammaproteobacteria_gi_414576343-1151-47557 hallmark;refseq;vdb 58;32;21;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella sonnei 3233-85 prophage linear Cluster_1 Gammaproteobacteria_gi_414577017 hallmark;refseq 77;51;15;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella sonnei 3233-85 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_414577320-10551-24106 hallmark;refseq 17;16;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella sonnei 3233-85 prophage linear Cluster_19 Gammaproteobacteria_gi_414579180-51003-98043 hallmark;refseq 54;38;15;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella sonnei 3233-85 prophage linear Cluster_2 Gammaproteobacteria_gi_414594918-0-16920 hallmark;refseq 14;12;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shimwellia Shimwellia blattae DSM 4481 = NBRC 105725 prophage linear Cluster_11 Gammaproteobacteria_gi_415764878 hallmark 26;9;12;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Aggregatibacter Aggregatibacter actinomycetemcomitans D17P-3 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_415770960 hallmark;refseq 43;25;7;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Aggregatibacter Aggregatibacter actinomycetemcomitans D17P-2 extrachromosomal linear Cluster_21 Gammaproteobacteria_gi_415771559 hallmark;refseq 41;35;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 3431 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_415771611 hallmark;refseq 59;35;13;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 3431 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_415777773 hallmark;refseq 15;12;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 3431 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_415778922 hallmark;refseq 51;45;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 3431 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_415779542 refseq 43;22;10;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 3431 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_415779888 hallmark;refseq 38;28;8;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 3431 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_415781566 refseq 21;19;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EPECa14 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_415781590 refseq 15;13;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EPECa14 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_415781922 refseq 27;13;10;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EPECa14 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_415782020 refseq 19;11;5;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EPECa14 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_415782501 refseq 15;12;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EPECa14 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_415782914-18686-35954 hallmark;refseq 21;17;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EPECa14 prophage linear Cluster_2 Gammaproteobacteria_gi_415784457-53209-92647 hallmark;refseq 52;47;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EPECa14 prophage linear Cluster_7 Gammaproteobacteria_gi_415790179 refseq 24;11;12;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EPECa14 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_415799121-1644-42152 hallmark;refseq 55;49;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli E128010 prophage linear Cluster_2 Gammaproteobacteria_gi_415803405 hallmark;refseq 30;20;8;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli E128010 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_415805303-34436-49016 hallmark;refseq 18;13;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli E128010 prophage linear Cluster_0 Gammaproteobacteria_gi_415805396 hallmark 11;5;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli E128010 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_415809956 hallmark;refseq 28;19;6;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli LT-68 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_415812059 hallmark;refseq 28;24;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli LT-68 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_415813018 hallmark;refseq 29;23;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli LT-68 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_415813134 refseq 19;12;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli LT-68 extrachromosomal linear Cluster_19 Gammaproteobacteria_gi_415813515 hallmark;refseq 23;14;8;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli LT-68 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_415816892 hallmark;refseq 11;8;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli OK1180 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_415817526 hallmark;refseq 20;12;5;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli OK1180 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_415817734 hallmark;refseq 19;14;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli OK1180 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_415819428 hallmark;refseq 63;42;8;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli OK1180 extrachromosomal linear Cluster_79 Gammaproteobacteria_gi_415819523 refseq 42;26;6;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli OK1180 extrachromosomal linear Cluster_79 Gammaproteobacteria_gi_415819780 hallmark;refseq 19;12;7; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli OK1180 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_415821325-88988-112707 hallmark;refseq 31;23;7;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli OK1180 prophage linear Cluster_4 Gammaproteobacteria_gi_415822712-0-51412 hallmark;refseq 56;53;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli OK1180 prophage linear Cluster_5 Gammaproteobacteria_gi_415825636 refseq 12;9;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli OK1357 extrachromosomal linear Cluster_353 Gammaproteobacteria_gi_415825676 refseq 41;37;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli OK1357 extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_415825733 refseq 38;35;;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli OK1357 extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_415826180-85973-100634 hallmark;refseq 13;10;2;1 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli OK1357 prophage linear Cluster_0 Gammaproteobacteria_gi_415829682-133441-164745 hallmark;refseq 39;33;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli OK1357 prophage linear Cluster_0 Gammaproteobacteria_gi_415830013-246-8889 refseq 11;11;; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli OK1357 prophage linear Cluster_230 Gammaproteobacteria_gi_415836690-1265-37023 hallmark;refseq 49;43;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli RN587/1 prophage linear Cluster_1 Gammaproteobacteria_gi_415836893 hallmark;refseq 19;16;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli RN587/1 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_415837599-187352-221855 hallmark;refseq 43;29;12;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli RN587/1 prophage linear Cluster_2 Gammaproteobacteria_gi_415840233-10958-47277 hallmark;refseq 49;33;8;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli RN587/1 prophage linear Cluster_0 Gammaproteobacteria_gi_415841233 refseq;vdb 37;18;17;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli RN587/1 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_415842188-6764-34323 hallmark;refseq 36;18;8;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli RN587/1 prophage linear Cluster_0 Gammaproteobacteria_gi_415844963 refseq 47;29;13;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella sonnei 53G extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_415845806-17176-30728 hallmark;refseq 18;17;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella sonnei 53G prophage linear Cluster_19 Gammaproteobacteria_gi_415846501-11846-43782 hallmark;refseq 44;35;8;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella sonnei 53G prophage linear Cluster_0 Gammaproteobacteria_gi_415850830 refseq 16;9;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella sonnei 53G extrachromosomal linear Cluster_19 Gammaproteobacteria_gi_415855909 hallmark;refseq 24;17;7; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella flexneri 2a str. 2457T extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_415859500 refseq 13;10;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella flexneri 2a str. 2457T extrachromosomal linear Cluster_19 Gammaproteobacteria_gi_415867544 refseq 22;16;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MS 85-1 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_415867602 hallmark;refseq 19;14;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MS 85-1 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_415867833 hallmark 19;9;4;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MS 85-1 extrachromosomal linear Cluster_33 Gammaproteobacteria_gi_415878485-11589-33294 hallmark;refseq 36;28;5;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MS 79-10 prophage linear Cluster_3 Gammaproteobacteria_gi_415880281 hallmark;refseq 23;20;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MS 79-10 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_416013532 hallmark;refseq 35;14;11;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. glycinea str. B076 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_416060787 noncaudo 14;5;;9 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Aggregatibacter Aggregatibacter actinomycetemcomitans serotype e str. SCC393 extrachromosomal linear Cluster_302 Gammaproteobacteria_gi_416101516 noncaudo 14;3;3;8 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Aggregatibacter Aggregatibacter actinomycetemcomitans serotype b str. I23C extrachromosomal linear Cluster_302 Gammaproteobacteria_gi_416150298 hallmark;refseq 44;30;3;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB210 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_416150982 hallmark;refseq 34;20;4;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB210 extrachromosomal linear Cluster_38 Gammaproteobacteria_gi_416151183 hallmark;refseq 30;23;3;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB210 extrachromosomal linear Cluster_46 Gammaproteobacteria_gi_416218107 hallmark;refseq 29;14;1;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Moraxella Moraxella catarrhalis 7169 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_416222931 hallmark 36;12;5;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Moraxella Moraxella catarrhalis 103P14B1 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_416224247 hallmark;refseq 19;11;1;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Moraxella Moraxella catarrhalis 103P14B1 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_416224637 hallmark;refseq 22;11;1;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;N4likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Moraxella Moraxella catarrhalis 103P14B1 extrachromosomal linear Cluster_188 Gammaproteobacteria_gi_416227889 hallmark;refseq 32;12;6;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Moraxella Moraxella catarrhalis 46P47B1 extrachromosomal linear Cluster_93 Gammaproteobacteria_gi_416245307 noncaudo 10;3;1;6 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Moraxella Moraxella catarrhalis BC8 extrachromosomal linear Cluster_165 Gammaproteobacteria_gi_416259294-0-11778 hallmark;refseq 16;16;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella dysenteriae CDC 74-1112 prophage linear Cluster_4 Gammaproteobacteria_gi_416259462 hallmark;refseq 21;18;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella dysenteriae CDC 74-1112 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_416261336-45920-72213 hallmark;refseq 27;17;8;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella dysenteriae CDC 74-1112 prophage linear Cluster_1 Gammaproteobacteria_gi_416261896 hallmark 16;7;7;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella dysenteriae CDC 74-1112 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_416263883 refseq 19;16;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella dysenteriae CDC 74-1112 extrachromosomal linear Cluster_79 Gammaproteobacteria_gi_416267742-0-11920 hallmark;refseq 12;10;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella dysenteriae CDC 74-1112 prophage linear Cluster_0 Gammaproteobacteria_gi_416267877 refseq 22;13;7;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella dysenteriae CDC 74-1112 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_416276788 refseq 21;17;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella dysenteriae CDC 74-1112 extrachromosomal linear Cluster_79 Gammaproteobacteria_gi_416277063 hallmark;refseq 24;21;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella dysenteriae CDC 74-1112 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_416277457-82733-116704 hallmark;refseq 42;32;7;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella dysenteriae CDC 74-1112 prophage linear Cluster_0 Gammaproteobacteria_gi_416278493 hallmark;refseq 34;23;9;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella boydii ATCC 9905 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_416279443 refseq 32;22;8;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella boydii ATCC 9905 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_416281219 refseq 38;25;6;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella boydii ATCC 9905 extrachromosomal linear Cluster_19 Gammaproteobacteria_gi_416282712-21693-53641 hallmark;refseq 39;32;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella boydii ATCC 9905 prophage linear Cluster_0 Gammaproteobacteria_gi_416283218 hallmark;refseq 27;15;5;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella boydii ATCC 9905 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_416285342 hallmark;refseq 23;16;3;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella boydii ATCC 9905 extrachromosomal linear Cluster_54 Gammaproteobacteria_gi_416285440 hallmark;refseq 24;18;6; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella boydii ATCC 9905 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_416287397 refseq 37;26;6;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella boydii ATCC 9905 extrachromosomal linear Cluster_37 Gammaproteobacteria_gi_416287516 hallmark;refseq 27;18;7;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella boydii ATCC 9905 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_416291394 hallmark;refseq 29;24;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella flexneri CDC 796-83 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_416294562 hallmark;vdb 19;10;8;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella flexneri CDC 796-83 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_416295887 hallmark;refseq 16;12;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella flexneri CDC 796-83 extrachromosomal linear Cluster_19 Gammaproteobacteria_gi_416297267 hallmark;refseq 22;18;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella flexneri CDC 796-83 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_416304889-58914-70843 hallmark;refseq 12;9;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella flexneri CDC 796-83 prophage linear Cluster_0 Gammaproteobacteria_gi_416307160 hallmark;refseq 21;18;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. 1044 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_416307245-1777-37113 hallmark;refseq;vdb 48;23;13;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. 1044 prophage linear Cluster_3 Gammaproteobacteria_gi_416307346 hallmark;refseq 25;19;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. 1044 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_416307467 hallmark;refseq 30;23;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. 1044 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_416307692 refseq 12;7;5; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. 1044 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_416307750-0-84352 hallmark;refseq;vdb 68;60;7;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. 1044 prophage linear Cluster_1 Gammaproteobacteria_gi_416308144 hallmark;refseq 21;17;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. 1044 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_416309610-299-34138 hallmark;refseq 34;34;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. 1044 prophage linear Cluster_5 Gammaproteobacteria_gi_416310619 refseq 32;15;11;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. 1044 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_416318398 hallmark;refseq 15;13;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC1212 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_416318520-149725-185624 hallmark;refseq 51;47;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC1212 prophage linear Cluster_4 Gammaproteobacteria_gi_416318802-0-33341 hallmark;refseq 48;41;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC1212 prophage linear Cluster_3 Gammaproteobacteria_gi_416320642-0-21494 hallmark;refseq 30;18;9;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC1212 prophage linear Cluster_10 Gammaproteobacteria_gi_416320835-6448-20223 hallmark;refseq 15;14;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC1212 prophage linear Cluster_4 Gammaproteobacteria_gi_416320905 refseq 42;25;16;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC1212 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_416320993 refseq;vdb 18;12;6; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC1212 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_416323414-32369-55577 hallmark;refseq 36;24;7;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC1212 prophage linear Cluster_4 Gammaproteobacteria_gi_416323751 hallmark;refseq 39;26;11;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC1212 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_416324357 refseq 10;7;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. 1125 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_416324383 hallmark;refseq 26;19;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. 1125 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_416325272-0-26800 hallmark;refseq 32;24;7;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. 1125 prophage linear Cluster_2 Gammaproteobacteria_gi_416326267 hallmark 10;4;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. 1125 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_416327906 hallmark;refseq 16;13;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. 1125 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_416328450 refseq 15;11;1;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. 1125 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_416328769-0-12816 hallmark;refseq 22;16;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. 1125 prophage linear Cluster_1 Gammaproteobacteria_gi_416329258 hallmark;refseq 18;15;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. 1125 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_416330424-272385-303930 hallmark;refseq 32;32;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. 1125 prophage linear Cluster_5 Gammaproteobacteria_gi_416331479 hallmark;refseq 31;15;7;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. 1125 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_416331650 refseq 35;24;11; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. 1125 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_416331745 hallmark;refseq 17;15;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. 1125 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_416333389 hallmark;refseq 22;13;4;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli WV_060327 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_416334691-74563-105950 hallmark;refseq 40;33;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli WV_060327 prophage linear Cluster_0 Gammaproteobacteria_gi_416337394-688-24846 hallmark;refseq 26;19;7; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli WV_060327 prophage linear Cluster_1 Gammaproteobacteria_gi_416344888 refseq 29;17;11;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC4100B extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_416345456-245409-276665 hallmark;refseq 39;23;10;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC4100B prophage linear Cluster_0 Gammaproteobacteria_gi_416346558-3083-21688 hallmark;refseq 20;17;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC4100B prophage linear Cluster_2 Gammaproteobacteria_gi_416346558-350834-373632 hallmark;refseq 25;20;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC4100B prophage linear Cluster_1 Gammaproteobacteria_gi_416421222-144810-184572 hallmark;refseq 62;49;5;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Montevideo str. 315996572 prophage linear Cluster_23 Gammaproteobacteria_gi_416434486-40992-91098 hallmark;refseq 80;67;7;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1 prophage linear Cluster_23 Gammaproteobacteria_gi_416437810-144810-194915 hallmark;refseq 79;64;7;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3 prophage linear Cluster_23 Gammaproteobacteria_gi_416442707-144811-194916 hallmark;refseq 78;66;7;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4 prophage linear Cluster_23 Gammaproteobacteria_gi_416449924-144812-194917 hallmark;refseq 79;66;7;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1 prophage linear Cluster_23 Gammaproteobacteria_gi_416456076-144812-194917 hallmark;refseq 79;66;7;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2 prophage linear Cluster_23 Gammaproteobacteria_gi_416474647-667-34215 hallmark;refseq 45;41;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054 prophage linear Cluster_0 Gammaproteobacteria_gi_416477382-3582-53802 hallmark;refseq 78;66;7;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054 prophage linear Cluster_23 Gammaproteobacteria_gi_416484924-30-50086 hallmark;refseq 80;65;7;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675 prophage linear Cluster_23 Gammaproteobacteria_gi_416491564-15826-57153 hallmark;refseq 54;43;7;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675 prophage linear Cluster_0 Gammaproteobacteria_gi_416495320 hallmark;refseq 120;78;14;28 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965 extrachromosomal linear Cluster_79 Gammaproteobacteria_gi_416496768-0-39760 hallmark;refseq 61;48;5;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965 prophage linear Cluster_23 Gammaproteobacteria_gi_416527373-28290-78486 hallmark;refseq 73;66;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Montevideo str. LQC 10 prophage linear Cluster_23 Gammaproteobacteria_gi_416532884-149707-201891 hallmark;refseq 82;69;4;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Montevideo str. SARB30 prophage linear Cluster_4 Gammaproteobacteria_gi_416536570 hallmark;refseq 12;7;;5 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Montevideo str. SARB30 extrachromosomal linear Cluster_36 Gammaproteobacteria_gi_416543930-0-39721 hallmark;refseq 60;48;5;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Montevideo str. 19N prophage linear Cluster_23 Gammaproteobacteria_gi_416548563 hallmark;refseq 44;32;6;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Montevideo str. 29N extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_416570245-112244-150655 hallmark;refseq 58;48;4;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Montevideo str. 4441 H prophage linear Cluster_11 Gammaproteobacteria_gi_416574979-28207-78312 hallmark;refseq 81;66;7;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01 prophage linear Cluster_23 Gammaproteobacteria_gi_416582560-144811-194916 hallmark;refseq 81;66;7;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507 prophage linear Cluster_23 Gammaproteobacteria_gi_416603725-172617-223951 hallmark;refseq 81;67;7;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Montevideo str. 413180 prophage linear Cluster_23 Gammaproteobacteria_gi_416610812-0-51238 hallmark;refseq 82;68;7;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Montevideo str. 446600 prophage linear Cluster_23 Gammaproteobacteria_gi_416619157-672-34220 hallmark;refseq 46;41;5; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1 prophage linear Cluster_0 Gammaproteobacteria_gi_416622093-102060-152075 hallmark;refseq 79;64;7;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1 prophage linear Cluster_23 Gammaproteobacteria_gi_416626925-6579-39816 hallmark;refseq 38;33;5; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1 prophage linear Cluster_0 Gammaproteobacteria_gi_416630540-138463-177956 hallmark;refseq 60;47;5;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1 prophage linear Cluster_23 Gammaproteobacteria_gi_416631620 refseq 21;18;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1 extrachromosomal linear Cluster_23 Gammaproteobacteria_gi_416639573-6082-56226 hallmark;refseq 79;67;7;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Montevideo str. 609460 prophage linear Cluster_23 Gammaproteobacteria_gi_416649117-28232-78336 hallmark;refseq 80;65;7;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20 prophage linear Cluster_23 Gammaproteobacteria_gi_416655257-0-32549 hallmark;refseq 43;37;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Montevideo str. 556152 prophage linear Cluster_23 Gammaproteobacteria_gi_416665177-144814-194768 hallmark;refseq 78;63;7;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077 prophage linear Cluster_23 Gammaproteobacteria_gi_416683157-11611-61755 hallmark;refseq 80;68;7;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047 prophage linear Cluster_23 Gammaproteobacteria_gi_416689343-0-52935 hallmark;refseq 62;43;13;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055 prophage linear Cluster_0 Gammaproteobacteria_gi_416699054 hallmark;refseq 15;13;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055 extrachromosomal linear Cluster_23 Gammaproteobacteria_gi_416699088 refseq 23;19;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055 extrachromosomal linear Cluster_23 Gammaproteobacteria_gi_416703535-144812-194917 hallmark;refseq 81;66;7;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052 prophage linear Cluster_23 Gammaproteobacteria_gi_416711339-245865-295921 hallmark;refseq 81;66;7;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312 prophage linear Cluster_23 Gammaproteobacteria_gi_416715663-144812-194917 hallmark;refseq 80;65;7;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258 prophage linear Cluster_23 Gammaproteobacteria_gi_416722414-144812-194917 hallmark;refseq 81;66;7;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Montevideo str. 315731156 prophage linear Cluster_23 Gammaproteobacteria_gi_416727614-112117-151916 hallmark;refseq 61;48;5;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199 prophage linear Cluster_23 Gammaproteobacteria_gi_416736857-61942-101691 hallmark;refseq 60;47;5;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282 prophage linear Cluster_23 Gammaproteobacteria_gi_416737753-0-16699 hallmark;refseq 25;22;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282 prophage linear Cluster_0 Gammaproteobacteria_gi_416743920 hallmark;refseq 33;29;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283 extrachromosomal linear Cluster_23 Gammaproteobacteria_gi_416750797-0-19397 hallmark;refseq 23;19;1;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283 prophage linear Cluster_23 Gammaproteobacteria_gi_416754364-19163-58769 hallmark;refseq 56;46;5;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284 prophage linear Cluster_23 Gammaproteobacteria_gi_416765432-61980-101750 hallmark;refseq 61;48;5;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285 prophage linear Cluster_23 Gammaproteobacteria_gi_416769272-144812-172460 hallmark;refseq 35;28;2;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287 prophage linear Cluster_23 Gammaproteobacteria_gi_416772088 refseq 23;19;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287 extrachromosomal linear Cluster_23 Gammaproteobacteria_gi_416773647 hallmark;refseq 16;12;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. G5101 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_416776219 hallmark;refseq 17;14;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. G5101 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_416785497 hallmark;refseq 16;12;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H- str. 493-89 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_416792873 hallmark;refseq 25;18;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H- str. 493-89 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_416796465 hallmark;refseq 16;12;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H- str. H 2687 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_416804180 hallmark;refseq 25;18;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H- str. H 2687 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_416807976 hallmark;refseq 16;12;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O55:H7 str. 3256-97 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_416814437 hallmark;refseq 15;14;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O55:H7 str. 3256-97 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_416815209 hallmark;refseq 27;20;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O55:H7 str. 3256-97 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_416820706 hallmark;refseq 20;17;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O55:H7 str. USDA 5905 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_416825125 hallmark;refseq 25;18;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O55:H7 str. USDA 5905 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_416825892 hallmark;refseq 16;13;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O55:H7 str. USDA 5905 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_416826232 hallmark;refseq 17;10;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O55:H7 str. USDA 5905 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_416828731 hallmark;refseq 16;12;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. LSU-61 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_416831715 refseq 17;9;4;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. LSU-61 extrachromosomal linear Cluster_493 Gammaproteobacteria_gi_416835957 hallmark;refseq 25;18;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. LSU-61 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_416894577 hallmark;refseq 54;25;13;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Aggregatibacter Aggregatibacter aphrophilus ATCC 33389 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_416895606-406944-432062 hallmark;refseq 39;30;5;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli STEC_7v prophage linear Cluster_1 Gammaproteobacteria_gi_416896041-243073-270495 hallmark;refseq 45;35;5;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli STEC_7v prophage linear Cluster_11 Gammaproteobacteria_gi_416897276 refseq 39;18;12;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli STEC_7v extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_416897375 hallmark;refseq 23;16;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli STEC_7v extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_416898115 hallmark;refseq 17;14;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli STEC_7v extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_416898449-0-23621 hallmark;refseq 41;34;3;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli STEC_7v prophage linear Cluster_11 Gammaproteobacteria_gi_416898449-188977-230534 hallmark;refseq 55;47;6;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli STEC_7v prophage linear Cluster_7 Gammaproteobacteria_gi_416898449-367847-390607 hallmark;refseq 29;26;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli STEC_7v prophage linear Cluster_0 Gammaproteobacteria_gi_417083993 refseq 28;15;9;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli cloneA_i1 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_417084054 hallmark;refseq 18;12;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli cloneA_i1 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_417085157-93955-126014 hallmark;refseq 40;33;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli cloneA_i1 prophage linear Cluster_0 Gammaproteobacteria_gi_417085607-27117-55080 hallmark;refseq;vdb 37;25;8;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli cloneA_i1 prophage linear Cluster_11 Gammaproteobacteria_gi_417111998 hallmark;refseq 15;13;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 1.2741 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_417112098-0-19416 hallmark;refseq 23;18;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 1.2741 prophage linear Cluster_1 Gammaproteobacteria_gi_417112603-35193-75196 hallmark;refseq 54;45;7;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 1.2741 prophage linear Cluster_11 Gammaproteobacteria_gi_417114146-77370-94325 refseq;vdb 27;18;7;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 1.2741 prophage linear Cluster_1 Gammaproteobacteria_gi_417114797-130455-172445 hallmark;refseq 58;47;5;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 1.2741 prophage linear Cluster_7 Gammaproteobacteria_gi_417114797-658252-689110 hallmark;refseq 44;36;5;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 1.2741 prophage linear Cluster_0 Gammaproteobacteria_gi_417119087-426553-459374 hallmark;refseq 45;36;6;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 1.2741 prophage linear Cluster_1 Gammaproteobacteria_gi_417120396-161258-191126 hallmark;refseq 41;34;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 97.0246 prophage linear Cluster_0 Gammaproteobacteria_gi_417124260-517-35180 hallmark;refseq 44;38;6; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 97.0246 prophage linear Cluster_1 Gammaproteobacteria_gi_417125096 hallmark;refseq 36;22;8;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 97.0246 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_417126178-106036-131708 hallmark;refseq 40;23;10;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 97.0246 prophage linear Cluster_10 Gammaproteobacteria_gi_417128128 hallmark;refseq 25;20;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 97.0246 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_417128383 refseq 36;19;10;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 97.0246 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_417129507 hallmark;refseq 25;21;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 5.0588 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_417142058-31770-64418 hallmark;refseq 41;35;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 97.0259 prophage linear Cluster_0 Gammaproteobacteria_gi_417145620 hallmark;refseq 28;23;5; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 1.2264 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_417145862-411558-452621 hallmark;refseq;vdb 61;52;7;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 1.2264 prophage linear Cluster_11 Gammaproteobacteria_gi_417148199-169409-232691 hallmark;refseq 72;56;9;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 1.2264 prophage linear Cluster_5 Gammaproteobacteria_gi_417154139-975617-1021136 hallmark;refseq 52;45;7; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 96.0497 prophage linear Cluster_1 Gammaproteobacteria_gi_417156405-1438985-1469935 hallmark;refseq 39;36;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 96.0497 prophage linear Cluster_0 Gammaproteobacteria_gi_417161881 hallmark;refseq 27;21;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 99.0741 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_417164773 hallmark;refseq 27;25;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 99.0741 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_417164892 hallmark;refseq 26;22;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 99.0741 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_417173365-3718529-3744396 hallmark;refseq 36;25;8;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 3.2608 prophage linear Cluster_1 Gammaproteobacteria_gi_417179411-0-28175 hallmark;refseq 40;28;9;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 93.0624 prophage linear Cluster_1 Gammaproteobacteria_gi_417179842 hallmark;refseq 16;9;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 93.0624 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_417179872 hallmark;refseq 16;12;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 93.0624 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_417180873 hallmark;refseq 59;48;6;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 93.0624 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_417182392-319909-351271 hallmark;refseq 37;23;7;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 93.0624 prophage linear Cluster_0 Gammaproteobacteria_gi_417182966 hallmark;refseq 22;13;4;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 93.0624 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_417188728 refseq 11;9;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Punalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 4.0522 extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_417189413 hallmark;refseq 39;27;4;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 4.0522 extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_417189686-113765-137864 hallmark;refseq 28;18;8;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 4.0522 prophage linear Cluster_1 Gammaproteobacteria_gi_417190246 hallmark;refseq 19;18;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 4.0522 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_417190322 hallmark;refseq 12;9;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 4.0522 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_417191848-477281-507317 hallmark;refseq 30;27;;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 4.0522 prophage linear Cluster_5 Gammaproteobacteria_gi_417191848-50725-93572 hallmark;refseq 69;59;5;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 4.0522 prophage linear Cluster_11 Gammaproteobacteria_gi_417193850 refseq 17;12;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Punalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 4.0522 extrachromosomal linear Cluster_79 Gammaproteobacteria_gi_417194058 refseq 17;9;6;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 4.0522 extrachromosomal linear Cluster_19 Gammaproteobacteria_gi_417194368 refseq 12;10;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 4.0522 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_417194600 refseq 10;9;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Punalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 4.0522 extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_417195918 refseq 16;10;1;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 4.0522 extrachromosomal linear Cluster_79 Gammaproteobacteria_gi_417196687 refseq 20;16;1;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 4.0522 extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_417196848 refseq 13;12;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 4.0522 extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_417198414 refseq 20;20;; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 4.0522 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_417200341 hallmark;refseq 12;10;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 4.0522 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_417200957-45537-67871 hallmark;refseq 27;21;6; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 4.0522 prophage linear Cluster_4 Gammaproteobacteria_gi_417204479-30644-53132 hallmark;refseq 18;18;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli JB1-95 prophage linear Cluster_5 Gammaproteobacteria_gi_417206616 refseq 31;26;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli JB1-95 extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_417208766 hallmark;refseq 15;10;5; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli JB1-95 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_417217679 refseq 19;17;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli JB1-95 extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_417219307 hallmark;refseq 38;31;2;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Punalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli JB1-95 extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_417220728-2911224-2954819 hallmark;refseq 56;46;8;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 96.154 prophage linear Cluster_1 Gammaproteobacteria_gi_417223690-1656344-1693861 hallmark;refseq 58;51;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 96.154 prophage linear Cluster_3 Gammaproteobacteria_gi_417223690-1806063-1848072 hallmark;refseq 48;33;9;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 96.154 prophage linear Cluster_4 Gammaproteobacteria_gi_417226623 refseq 46;27;12;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 5.0959 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_417227145 refseq 16;13;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 5.0959 extrachromosomal linear Cluster_19 Gammaproteobacteria_gi_417227324-0-73097 hallmark;refseq;vdb 70;50;18;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 5.0959 prophage linear Cluster_1 Gammaproteobacteria_gi_417230690 hallmark;refseq 75;41;19;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 5.0959 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_417230772-0-43149 hallmark;refseq 62;48;9;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 5.0959 prophage linear Cluster_4 Gammaproteobacteria_gi_417231137-276361-341484 hallmark;refseq 86;75;9;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 5.0959 prophage linear Cluster_5 Gammaproteobacteria_gi_417233947 hallmark;refseq 19;12;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 5.0959 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_417234041 refseq 25;13;12; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 5.0959 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_417234459 hallmark;refseq 15;10;5; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 5.0959 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_417235513 hallmark;refseq 19;13;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 9.0111 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_417239761 hallmark 15;7;7;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 9.0111 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_417240967-23292-98589 hallmark;refseq 88;67;14;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 9.0111 prophage linear Cluster_5 Gammaproteobacteria_gi_417241141 hallmark;refseq 43;36;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 9.0111 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_417244487-277124-311426 hallmark;refseq 52;36;9;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 9.0111 prophage linear Cluster_10 Gammaproteobacteria_gi_417247545-0-23912 hallmark;refseq 31;23;7;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 9.0111 prophage linear Cluster_1 Gammaproteobacteria_gi_417248758 hallmark;refseq 15;10;5; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 4.0967 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_417250439 refseq 33;25;7;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 4.0967 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_417251055-0-27589 hallmark;refseq 43;22;15;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 4.0967 prophage linear Cluster_10 Gammaproteobacteria_gi_417253601 hallmark;refseq 24;16;8; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 4.0967 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_417254315-35743-97828 hallmark;refseq 81;76;5; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 4.0967 prophage linear Cluster_5 Gammaproteobacteria_gi_417259606 hallmark;refseq 35;17;5;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2.3916 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_417260275-0-14122 hallmark;vdb 20;14;5;1 Viruses;dsDNA viruses no RNA stage;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2.3916 prophage linear Cluster_3 Gammaproteobacteria_gi_417261156-907918-926744 hallmark;refseq 32;21;4;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2.3916 prophage linear Cluster_3 Gammaproteobacteria_gi_417263098-0-21114 hallmark;refseq 36;26;6;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2.3916 prophage linear Cluster_1 Gammaproteobacteria_gi_417263829-71909-114102 hallmark;refseq 55;45;4;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2.3916 prophage linear Cluster_11 Gammaproteobacteria_gi_417264840-0-45551 hallmark;refseq 62;34;11;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2.3916 prophage linear Cluster_72 Gammaproteobacteria_gi_417265622-29934-91381 hallmark;refseq 73;60;7;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 3.3884 prophage linear Cluster_5 Gammaproteobacteria_gi_417274097-720610-764886 hallmark;refseq 74;56;10;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2.4168 prophage linear Cluster_347 Gammaproteobacteria_gi_417275549 hallmark;refseq 21;16;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 3.2303 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_417277323-65468-86045 hallmark;refseq 29;25;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 3.2303 prophage linear Cluster_0 Gammaproteobacteria_gi_417278042-19106-30840 hallmark;refseq 18;14;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 3.2303 prophage linear Cluster_0 Gammaproteobacteria_gi_417280092-362797-409590 hallmark;refseq 68;54;7;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 3003 prophage linear Cluster_1 Gammaproteobacteria_gi_417280092-575964-606578 hallmark;refseq 45;38;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 3003 prophage linear Cluster_0 Gammaproteobacteria_gi_417280092-805-38431 hallmark;refseq 47;30;14;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 3003 prophage linear Cluster_2 Gammaproteobacteria_gi_417282694-0-45350 hallmark;refseq;vdb 56;28;22;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 3003 prophage linear Cluster_1 Gammaproteobacteria_gi_417284053-0-40264 hallmark;refseq 56;50;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 3003 prophage linear Cluster_1 Gammaproteobacteria_gi_417284853 hallmark;refseq 52;28;20;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 3003 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_417287374-895739-928908 hallmark;refseq 50;41;5;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW07793 prophage linear Cluster_3 Gammaproteobacteria_gi_417288245-1-73736 hallmark;refseq 86;52;30;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW07793 prophage linear Cluster_1 Gammaproteobacteria_gi_417290554-1118500-1161762 hallmark;refseq 60;49;4;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B41 prophage linear Cluster_7 Gammaproteobacteria_gi_417294551 refseq 38;16;14;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 900105 (10e) extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_417294597 hallmark;refseq 15;10;5; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 900105 (10e) extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_417294841-43659-79455 hallmark;refseq 58;52;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 900105 (10e) prophage linear Cluster_4 Gammaproteobacteria_gi_417295241 hallmark;refseq 18;15;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 900105 (10e) extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_417297420-145-17074 hallmark;refseq 20;16;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 900105 (10e) prophage linear Cluster_4 Gammaproteobacteria_gi_417298571-307455-332336 hallmark;refseq 35;20;11;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 900105 (10e) prophage linear Cluster_10 Gammaproteobacteria_gi_417298961 hallmark;refseq 20;15;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 900105 (10e) extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_417299202-323515-345694 hallmark;refseq 33;22;6;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 900105 (10e) prophage linear Cluster_1 Gammaproteobacteria_gi_417299555 hallmark;refseq 14;12;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 900105 (10e) extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_417299571-141416-180853 hallmark;refseq 51;46;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 900105 (10e) prophage linear Cluster_7 Gammaproteobacteria_gi_417299571-520434-545128 hallmark;refseq 40;30;8;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 900105 (10e) prophage linear Cluster_1 Gammaproteobacteria_gi_417308713-243408-280854 hallmark;refseq 49;45;1;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PCN033 prophage linear Cluster_7 Gammaproteobacteria_gi_417310429-49152-82582 hallmark;refseq 42;35;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PCN033 prophage linear Cluster_0 Gammaproteobacteria_gi_417311161 hallmark;refseq 22;15;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PCN033 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_417319646-50041-60465 refseq 17;10;1;6 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio parahaemolyticus 10329 prophage linear Cluster_14 Gammaproteobacteria_gi_417340615 hallmark;refseq 22;20;1;1 Viruses;unclassified phages;;;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Baildon str. R6-199 extrachromosomal linear Cluster_54 Gammaproteobacteria_gi_417354797 refseq 14;9;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Give str. S5-487 extrachromosomal linear Cluster_230 Gammaproteobacteria_gi_417356742 hallmark;refseq 31;18;12;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Give str. S5-487 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_417358931-3002983-3033332 hallmark;refseq 39;28;6;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Edwardsiella Edwardsiella ictaluri 93-146 prophage linear Cluster_0 Gammaproteobacteria_gi_417412242 hallmark;refseq 36;33;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Mississippi str. A4-633 extrachromosomal linear Cluster_11 Gammaproteobacteria_gi_417468841 hallmark;refseq 31;28;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Montevideo str. S5-403 extrachromosomal linear Cluster_23 Gammaproteobacteria_gi_417469243-3057-17066 hallmark;refseq 16;16;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Montevideo str. S5-403 prophage linear Cluster_0 Gammaproteobacteria_gi_417469843 hallmark;refseq 23;16;7; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Montevideo str. S5-403 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_417516202 refseq 21;19;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Uganda str. R8-3404 extrachromosomal linear Cluster_23 Gammaproteobacteria_gi_417517153 refseq 31;22;5;4 Viruses;unclassified;unclassified;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Uganda str. R8-3404 extrachromosomal linear Cluster_37 Gammaproteobacteria_gi_417520687-0-10032 hallmark;refseq 13;10;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Uganda str. R8-3404 prophage linear Cluster_0 Gammaproteobacteria_gi_417558989 hallmark;vdb 16;5;8;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xylella Xylella fastidiosa EB92.1 extrachromosomal linear Cluster_202 Gammaproteobacteria_gi_417567970 hallmark;refseq 49;40;4;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii OIFC189 extrachromosomal linear Cluster_24 Gammaproteobacteria_gi_417571585 hallmark;refseq 120;48;22;50 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii OIFC189 extrachromosomal linear Cluster_53 Gammaproteobacteria_gi_417577763 hallmark;refseq 37;21;5;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii Naval-17 extrachromosomal linear Cluster_24 Gammaproteobacteria_gi_417578405 hallmark;refseq 28;26;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii Naval-17 extrachromosomal linear Cluster_46 Gammaproteobacteria_gi_417579723-38873-79097 hallmark;refseq 52;39;10;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli STEC_B2F1 prophage linear Cluster_1 Gammaproteobacteria_gi_417580651 refseq 18;12;6; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli STEC_B2F1 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_417580868 hallmark;refseq 22;16;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli STEC_B2F1 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_417583472-68851-99801 hallmark;refseq 39;36;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli STEC_B2F1 prophage linear Cluster_0 Gammaproteobacteria_gi_417584279 hallmark;refseq 19;15;;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Punalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli STEC_C165-02 extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_417584302 hallmark;refseq 57;47;5;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli STEC_C165-02 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_417584354 refseq 31;30;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli STEC_C165-02 extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_417584388 refseq 20;19;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli STEC_C165-02 extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_417585694 hallmark;refseq 44;38;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Punalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli STEC_C165-02 extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_417585741 refseq 23;21;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli STEC_C165-02 extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_417585767-297-12774 hallmark;refseq 12;10;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli STEC_C165-02 prophage linear Cluster_0 Gammaproteobacteria_gi_417586362-514221-532412 hallmark;refseq;vdb 20;16;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli STEC_C165-02 prophage linear Cluster_1 Gammaproteobacteria_gi_417589252 refseq 15;11;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2534-86 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_417589274 refseq 12;8;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2534-86 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_417589299 hallmark;refseq 27;22;5; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2534-86 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_417590463 hallmark;refseq 13;9;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2534-86 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_417591027 refseq 12;8;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2534-86 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_417591212 hallmark;refseq 18;15;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2534-86 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_417592141 refseq 39;22;11;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2534-86 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_417595094-23378-51751 hallmark;refseq 45;35;6;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 3030-1 prophage linear Cluster_2 Gammaproteobacteria_gi_417595700 hallmark;refseq 35;27;6;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 3030-1 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_417595734 hallmark;refseq;vdb 19;17;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 3030-1 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_417600077-753-13409 refseq;vdb 15;12;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 3030-1 prophage linear Cluster_1 Gammaproteobacteria_gi_417600136 hallmark;refseq 17;16;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 3030-1 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_417600161 hallmark;refseq 29;21;6;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 3030-1 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_417601311 hallmark;refseq 19;14;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli STEC_94C extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_417601766-360-39340 hallmark;refseq 39;35;1;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli STEC_94C prophage linear Cluster_5 Gammaproteobacteria_gi_417603250 refseq 10;8;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli STEC_94C extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_417606203 hallmark;refseq 35;32;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli STEC_DG131-3 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_417606544-36530-71013 hallmark;refseq 49;40;9; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli STEC_DG131-3 prophage linear Cluster_1 Gammaproteobacteria_gi_417607234 refseq 17;15;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli STEC_DG131-3 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_417607608 hallmark;refseq 54;28;17;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli STEC_DG131-3 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_417607938 hallmark;refseq 28;22;6; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli STEC_DG131-3 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_417607968-76688-139844 hallmark;refseq 74;59;9;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli STEC_DG131-3 prophage linear Cluster_5 Gammaproteobacteria_gi_417611714 hallmark;refseq 20;14;6; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli STEC_EH250 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_417611737-74353-118076 hallmark;refseq 56;41;8;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli STEC_EH250 prophage linear Cluster_1 Gammaproteobacteria_gi_417612102-44417-109338 hallmark;refseq 74;65;3;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli STEC_EH250 prophage linear Cluster_5 Gammaproteobacteria_gi_417612559 hallmark;refseq 16;10;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli STEC_EH250 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_417615901-254373-292104 hallmark;refseq 52;42;8;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli STEC_EH250 prophage linear Cluster_1 Gammaproteobacteria_gi_417617096 hallmark;refseq 30;15;15; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli G58-1 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_417621513-299171-322330 hallmark;refseq 39;29;6;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli STEC_H.1.8 prophage linear Cluster_1 Gammaproteobacteria_gi_417622762 hallmark;refseq 20;17;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli STEC_H.1.8 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_417622844 hallmark;refseq;vdb 31;13;12;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli STEC_H.1.8 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_417622875 hallmark;refseq 31;20;10;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli STEC_H.1.8 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_417623676-0-22873 hallmark;refseq;vdb 37;25;5;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli STEC_H.1.8 prophage linear Cluster_1 Gammaproteobacteria_gi_417626887 hallmark;vdb 23;5;8;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli STEC_H.1.8 extrachromosomal linear Cluster_28 Gammaproteobacteria_gi_417628169 hallmark;vdb 51;21;22;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli STEC_MHI813 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_417628228 hallmark;refseq 20;18;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli STEC_MHI813 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_417637868 hallmark;refseq 14;12;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TX1999 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_417663167-0-38070 hallmark;refseq 60;49;5;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli AA86 prophage linear Cluster_3 Gammaproteobacteria_gi_417665273-68989-91402 hallmark;refseq 29;23;6; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli STEC_O31 prophage linear Cluster_10 Gammaproteobacteria_gi_417665361-285249-319090 hallmark;refseq 45;35;10; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli STEC_O31 prophage linear Cluster_1 Gammaproteobacteria_gi_417666239 hallmark;refseq 34;25;4;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli STEC_O31 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_417666299-319807-339805 hallmark;refseq 24;18;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli STEC_O31 prophage linear Cluster_26 Gammaproteobacteria_gi_417666876 hallmark;refseq 32;26;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli STEC_O31 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_417667264 hallmark;refseq 16;10;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli STEC_O31 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_417670317 hallmark;refseq 12;10;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella dysenteriae 155-74 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_417670361 hallmark;refseq 17;12;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella dysenteriae 155-74 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_417671252 refseq 24;15;6;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella dysenteriae 155-74 extrachromosomal linear Cluster_19 Gammaproteobacteria_gi_417671997 hallmark;refseq 16;14;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella dysenteriae 155-74 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_417675763 refseq 14;7;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella dysenteriae 155-74 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_417692287 refseq 9;5;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella boydii 5216-82 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_417700248 hallmark;refseq 18;14;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella flexneri K-218 extrachromosomal linear Cluster_19 Gammaproteobacteria_gi_417700771 refseq 23;17;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella flexneri K-218 extrachromosomal linear Cluster_19 Gammaproteobacteria_gi_417700797 hallmark;refseq 27;21;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella flexneri K-218 extrachromosomal linear Cluster_19 Gammaproteobacteria_gi_417700824-1067-11463 refseq;vdb 12;10;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella flexneri K-218 prophage linear Cluster_47 Gammaproteobacteria_gi_417701352 hallmark;refseq 21;14;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella flexneri K-218 extrachromosomal linear Cluster_19 Gammaproteobacteria_gi_417705779 hallmark;refseq 51;43;4;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella flexneri VA-6 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_417706318 refseq 16;14;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella flexneri VA-6 extrachromosomal linear Cluster_19 Gammaproteobacteria_gi_417706338-0-11757 hallmark;refseq;vdb 15;12;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella flexneri VA-6 prophage linear Cluster_47 Gammaproteobacteria_gi_417707857 hallmark;refseq 15;10;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella flexneri VA-6 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_417709717 refseq 20;13;3;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella flexneri VA-6 extrachromosomal linear Cluster_19 Gammaproteobacteria_gi_417721204 hallmark;refseq 18;15;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella flexneri K-304 extrachromosomal linear Cluster_19 Gammaproteobacteria_gi_417721759 hallmark;refseq 29;21;8; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella flexneri K-304 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_417723463 refseq 18;11;4;3 Viruses;unclassified;unclassified;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella flexneri K-304 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_417724229 hallmark;refseq 17;11;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella flexneri K-304 extrachromosomal linear Cluster_19 Gammaproteobacteria_gi_417728594 refseq 16;9;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella flexneri K-671 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_417728614 refseq 16;10;6; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella flexneri K-671 extrachromosomal linear Cluster_19 Gammaproteobacteria_gi_417728792 hallmark;refseq 20;12;4;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella flexneri K-671 extrachromosomal linear Cluster_19 Gammaproteobacteria_gi_417729005-1367-12801 refseq;vdb 14;12;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella flexneri K-671 prophage linear Cluster_47 Gammaproteobacteria_gi_417737068 hallmark;refseq 20;14;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella flexneri 4343-70 extrachromosomal linear Cluster_19 Gammaproteobacteria_gi_417737565 refseq 28;19;7;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella flexneri 4343-70 extrachromosomal linear Cluster_19 Gammaproteobacteria_gi_417737597 hallmark;refseq 23;19;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella flexneri 4343-70 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_417737774-12910-18352 refseq 9;7;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella flexneri 4343-70 prophage linear Cluster_19 Gammaproteobacteria_gi_417743548 refseq 24;12;10;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella flexneri 2930-71 extrachromosomal linear Cluster_19 Gammaproteobacteria_gi_417743575 refseq 29;18;11; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella flexneri 2930-71 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_417754031 refseq 16;11;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC2B extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_417754622-271370-295186 hallmark;refseq 39;35;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC2B prophage linear Cluster_1 Gammaproteobacteria_gi_417756020 hallmark;refseq 18;12;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC2B extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_417808651 hallmark;refseq 30;13;5;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. LB226692 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_417808681 refseq 25;20;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. LB226692 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_417808751 hallmark;refseq 19;13;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. LB226692 extrachromosomal linear Cluster_11 Gammaproteobacteria_gi_417813428-53542-57958 noncaudo 6;6;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-49A2 prophage linear Cluster_12 Gammaproteobacteria_gi_417815625-797246-803468 refseq 10;10;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HCUF01 prophage linear Cluster_12 Gammaproteobacteria_gi_417816338 noncaudo 12;5;3;4 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HCUF01 extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_417822463-699491-732327 hallmark;refseq 41;22;5;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HE48 prophage linear Cluster_5 Gammaproteobacteria_gi_417826216-15697-47412 hallmark;refseq 52;49;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella flexneri J1713 prophage linear Cluster_3 Gammaproteobacteria_gi_417826769 refseq 26;14;8;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella flexneri J1713 extrachromosomal linear Cluster_19 Gammaproteobacteria_gi_417828146 refseq 16;12;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella flexneri J1713 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_417829164-371-24463 hallmark;refseq 40;23;9;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella flexneri J1713 prophage linear Cluster_3 Gammaproteobacteria_gi_417830908-67840-114343 hallmark;refseq 59;44;11;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella flexneri J1713 prophage linear Cluster_1 Gammaproteobacteria_gi_417831737-121144-164762 hallmark;refseq 55;42;9;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 01-09591 prophage linear Cluster_1 Gammaproteobacteria_gi_417835994 refseq 24;18;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 01-09591 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_417836316 hallmark;refseq 13;11;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 01-09591 extrachromosomal linear Cluster_11 Gammaproteobacteria_gi_417836476 hallmark;refseq 60;28;17;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 01-09591 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_417836724 refseq 20;17;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 01-09591 extrachromosomal linear Cluster_23 Gammaproteobacteria_gi_417844251 noncaudo 17;4;3;10 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Haemophilus Haemophilus haemolyticus M21639 extrachromosomal linear Cluster_302 Gammaproteobacteria_gi_417845254-0-69420 hallmark;refseq 96;32;42;22 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Haemophilus Haemophilus haemolyticus M21639 prophage linear Cluster_3 Gammaproteobacteria_gi_417845552-6906-18534 hallmark 15;4;6;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Haemophilus Haemophilus haemolyticus M21639 prophage linear Cluster_2 Gammaproteobacteria_gi_417845746 hallmark;refseq 34;16;1;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Haemophilus Haemophilus haemolyticus M21639 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_417845915 hallmark;refseq 27;20;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Haemophilus Haemophilus haemolyticus M21639 extrachromosomal linear Cluster_44 Gammaproteobacteria_gi_417846076-0-27062 hallmark;refseq 38;32;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Haemophilus Haemophilus haemolyticus M21639 prophage linear Cluster_0 Gammaproteobacteria_gi_417846219 refseq 33;14;6;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Haemophilus Haemophilus haemolyticus M21639 extrachromosomal linear Cluster_134 Gammaproteobacteria_gi_417846251 hallmark;refseq 42;26;6;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Haemophilus Haemophilus haemolyticus M21639 extrachromosomal linear Cluster_134 Gammaproteobacteria_gi_417846447 hallmark;refseq 41;23;6;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Haemophilus Haemophilus haemolyticus M21639 extrachromosomal linear Cluster_179 Gammaproteobacteria_gi_417854891 hallmark;refseq 19;19;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Pasteurella Pasteurella multocida subsp. multocida str. Anand1_goat extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_417854912 hallmark;refseq 22;19;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Pasteurella Pasteurella multocida subsp. multocida str. Anand1_goat extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_417863696-322326-364808 hallmark;refseq 57;44;10;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. C227-11 prophage linear Cluster_1 Gammaproteobacteria_gi_417864780-354524-413984 hallmark;refseq 71;70;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. C227-11 prophage linear Cluster_5 Gammaproteobacteria_gi_417865239-340448-399910 hallmark;refseq 76;58;8;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. C227-11 prophage linear Cluster_5 Gammaproteobacteria_gi_417868439 hallmark;refseq 17;13;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. C227-11 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_417868840-0-21968 hallmark;refseq 34;21;2;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH1 prophage linear Cluster_346 Gammaproteobacteria_gi_417870530 hallmark;noncaudo 10;3;;7 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH1 extrachromosomal linear Cluster_232 Gammaproteobacteria_gi_417872714 hallmark;refseq 56;30;7;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH2 extrachromosomal linear Cluster_38 Gammaproteobacteria_gi_417873779 hallmark 33;12;11;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH2 extrachromosomal linear Cluster_28 Gammaproteobacteria_gi_417874182 hallmark;refseq 19;18;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH2 extrachromosomal linear Cluster_46 Gammaproteobacteria_gi_417874997 hallmark;refseq 43;21;4;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH2 extrachromosomal linear Cluster_53 Gammaproteobacteria_gi_417876138 hallmark;refseq 103;42;6;55 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH2 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_417877323 hallmark;refseq 19;15;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH3 extrachromosomal linear Cluster_24 Gammaproteobacteria_gi_417882666 hallmark;refseq 26;15;;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH4 extrachromosomal linear Cluster_93 Gammaproteobacteria_gi_417883085 hallmark;refseq 21;10;5;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH4 extrachromosomal linear Cluster_24 Gammaproteobacteria_gi_417883141 hallmark;refseq 18;14;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH4 extrachromosomal linear Cluster_38 Gammaproteobacteria_gi_417883804 hallmark 29;13;5;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;T4likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH4 extrachromosomal linear Cluster_53 Gammaproteobacteria_gi_417884026 hallmark;refseq 95;40;5;50 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH4 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_417884297 hallmark;refseq 40;20;3;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH4 extrachromosomal linear Cluster_93 Gammaproteobacteria_gi_417884644 hallmark;refseq 20;7;4;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Tunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH4 extrachromosomal linear Cluster_169 Gammaproteobacteria_gi_417949419-198-5285 noncaudo 12;3;;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio splendidus ATCC 33789 prophage linear Cluster_607 Gammaproteobacteria_gi_417949419-5402-16912 noncaudo 17;7;2;8 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio splendidus ATCC 33789 prophage linear Cluster_14 Gammaproteobacteria_gi_417978744 refseq 33;32;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli XH001 extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_417978988-680-11551 hallmark;refseq;vdb 13;12;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli XH001 prophage linear Cluster_19 Gammaproteobacteria_gi_418026272 noncaudo 12;3;1;8 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Alteromonadales;Shewanellaceae;Shewanella Shewanella baltica OS625 extrachromosomal linear Cluster_228 Gammaproteobacteria_gi_418043487-70381-92174 hallmark;refseq 27;20;2;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli W26 prophage linear Cluster_26 Gammaproteobacteria_gi_418044387 refseq 25;18;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli W26 extrachromosomal linear Cluster_79 Gammaproteobacteria_gi_418044409 hallmark;refseq 59;37;9;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli W26 extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_418044465 hallmark;refseq 30;19;2;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli W26 extrachromosomal linear Cluster_79 Gammaproteobacteria_gi_418242445-17149-48075 hallmark;refseq 41;28;5;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia enterocolitica subsp. palearctica PhRBD_Ye1 prophage linear Cluster_0 Gammaproteobacteria_gi_418242906-0-10954 hallmark;refseq 10;8;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia enterocolitica subsp. palearctica PhRBD_Ye1 prophage linear Cluster_0 Gammaproteobacteria_gi_418253103 hallmark;refseq 40;32;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella flexneri 6603-63 extrachromosomal linear Cluster_11 Gammaproteobacteria_gi_418253413-66833-101986 hallmark;refseq 51;47;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella flexneri 6603-63 prophage linear Cluster_3 Gammaproteobacteria_gi_418254329 hallmark;refseq;vdb 76;44;28;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella flexneri 6603-63 extrachromosomal linear Cluster_19 Gammaproteobacteria_gi_418256307 refseq 12;6;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella flexneri 6603-63 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_418256357 refseq 49;23;19;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella flexneri 6603-63 extrachromosomal linear Cluster_19 Gammaproteobacteria_gi_418265823-106601-131450 refseq;vdb 34;23;7;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella sonnei str. Moseley prophage linear Cluster_1 Gammaproteobacteria_gi_418267384-8804-22398 hallmark;refseq 18;17;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella sonnei str. Moseley prophage linear Cluster_19 Gammaproteobacteria_gi_418270137-41650-73594 hallmark;refseq 41;33;7;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella sonnei str. Moseley prophage linear Cluster_0 Gammaproteobacteria_gi_418300889-1462072-1491771 hallmark;refseq 47;32;8;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMNF18 prophage linear Cluster_3 Gammaproteobacteria_gi_418300889-2236016-2277962 hallmark;refseq 60;51;5;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMNF18 prophage linear Cluster_3 Gammaproteobacteria_gi_418300889-3087981-3117961 hallmark;refseq 48;31;8;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMNF18 prophage linear Cluster_3 Gammaproteobacteria_gi_418332479-10763-15094 refseq 6;6;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-06A1 prophage linear Cluster_12 Gammaproteobacteria_gi_418336524-800496-804948 noncaudo 6;6;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-23A1 prophage linear Cluster_12 Gammaproteobacteria_gi_418345740 refseq 7;7;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-28A1 extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_418348185-797578-802030 noncaudo 6;6;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-43A1 prophage linear Cluster_12 Gammaproteobacteria_gi_418348894 noncaudo 6;3;1;2 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-43A1 extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_418355312 refseq 11;11;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-61A1 extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_418357637 noncaudo 11;2;1;8 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Aeromonadales;Aeromonadaceae;Aeromonas Aeromonas salmonicida subsp. salmonicida 01-B526 extrachromosomal linear Cluster_198 Gammaproteobacteria_gi_418362827 hallmark;refseq 15;10;;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Aeromonadales;Aeromonadaceae;Aeromonas Aeromonas salmonicida subsp. salmonicida 01-B526 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_418465034 hallmark;refseq 49;31;4;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Aggregatibacter Aggregatibacter actinomycetemcomitans RhAA1 extrachromosomal linear Cluster_21 Gammaproteobacteria_gi_418483106-28313-78418 hallmark;refseq 81;66;7;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Montevideo str. 80959-06 prophage linear Cluster_23 Gammaproteobacteria_gi_418486285-106-41991 hallmark;refseq 67;53;5;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Montevideo str. CT_02035278 prophage linear Cluster_23 Gammaproteobacteria_gi_418497043-144811-194916 hallmark;refseq 80;67;7;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Montevideo str. CT_02035318 prophage linear Cluster_23 Gammaproteobacteria_gi_418501561-28260-78365 hallmark;refseq 80;67;7;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Montevideo str. CT_02035320 prophage linear Cluster_23 Gammaproteobacteria_gi_418505188-29247-79352 hallmark;refseq 77;65;7;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Montevideo str. CT_02035321 prophage linear Cluster_23 Gammaproteobacteria_gi_418507718-144812-172725 hallmark;refseq 34;26;2;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Montevideo str. CT_02035327 prophage linear Cluster_23 Gammaproteobacteria_gi_418514995 hallmark;refseq 100;90;3;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Pomona str. ATCC 10729 extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_418518641-585-10562 hallmark;noncaudo 15;3;1;11 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas axonopodis pv. malvacearum str. GSPB1386 prophage linear Cluster_366 Gammaproteobacteria_gi_418519098 hallmark;refseq 15;11;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas axonopodis pv. malvacearum str. GSPB1386 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_418525870-245816-295920 hallmark;refseq 82;67;7;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008286 prophage linear Cluster_23 Gammaproteobacteria_gi_418762721-0-15831 hallmark;refseq 18;15;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. CVM 35185 prophage linear Cluster_22 Gammaproteobacteria_gi_418764616-135370-169007 hallmark;refseq 44;35;7;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. CVM 35199 prophage linear Cluster_0 Gammaproteobacteria_gi_418766362 hallmark;refseq 13;13;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. CVM 35199 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_418767802 refseq 22;21;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. CVM 35199 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_418768286-100890-126584 hallmark;refseq 35;27;6;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. CVM 35199 prophage linear Cluster_2 Gammaproteobacteria_gi_418773232 hallmark;refseq 20;18;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. CVM 21539 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_418773567-327862-359450 hallmark;refseq 41;32;4;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. CVM 33953 prophage linear Cluster_0 Gammaproteobacteria_gi_418775825 hallmark;refseq 49;41;6;2 Viruses;unclassified;unclassified;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. CVM 33953 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_418777134 hallmark;refseq 49;29;12;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. CVM 33953 extrachromosomal linear Cluster_54 Gammaproteobacteria_gi_418777185-159532-175241 hallmark;refseq 18;15;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. CVM 33953 prophage linear Cluster_22 Gammaproteobacteria_gi_418783052 hallmark;refseq 33;26;4;3 Viruses;unclassified;unclassified;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. CVM 21559 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_418783804-135089-158177 hallmark;refseq 33;30;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. CVM 21559 prophage linear Cluster_0 Gammaproteobacteria_gi_418793421 hallmark;refseq 41;37;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. CVM 19449 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_418795843-0-39620 hallmark;refseq 46;35;7;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. CVM 19449 prophage linear Cluster_2 Gammaproteobacteria_gi_418801035 hallmark;refseq 58;44;2;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. CVM 35202 extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_418801094 refseq 19;15;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. CVM 35202 extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_418801116 refseq 15;14;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. CVM 35202 extrachromosomal linear Cluster_19 Gammaproteobacteria_gi_418804976-66-45852 hallmark;refseq 58;49;6;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. CVM 35202 prophage linear Cluster_1 Gammaproteobacteria_gi_418805673 hallmark;refseq 16;10;6; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. CVM 21550 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_418807160-66569-97268 hallmark;refseq 41;36;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. CVM 21550 prophage linear Cluster_0 Gammaproteobacteria_gi_418807822-0-15855 hallmark;refseq 18;15;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. CVM 21550 prophage linear Cluster_22 Gammaproteobacteria_gi_418809835 hallmark;refseq 17;11;6; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. CVM 22513 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_418811322-66521-97226 hallmark;refseq 39;34;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. CVM 22513 prophage linear Cluster_0 Gammaproteobacteria_gi_418815212-54217-85067 hallmark;refseq 32;29;2;1 Viruses;unclassified;unclassified;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. CVM 21538 prophage linear Cluster_1 Gammaproteobacteria_gi_418815720 refseq 19;15;;4 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. CVM 21538 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_418815745 refseq 18;18;; Viruses;unclassified phages;;;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. CVM 21538 extrachromosomal linear Cluster_82 Gammaproteobacteria_gi_418818557-66084-96789 hallmark;refseq 39;34;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. CVM 21538 prophage linear Cluster_0 Gammaproteobacteria_gi_418819119 refseq 19;15;;4 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. CVM 22425 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_418819659 hallmark;refseq 26;24;2; Viruses;unclassified phages;;;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. CVM 22425 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_418819988-132150-168362 hallmark;refseq 52;45;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. CVM 22425 prophage linear Cluster_11 Gammaproteobacteria_gi_418821520-66084-96789 hallmark;refseq 39;34;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. CVM 22425 prophage linear Cluster_0 Gammaproteobacteria_gi_418823758 hallmark;refseq 28;25;2;1 Viruses;unclassified phages;;;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. CVM 22425 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_418827041 hallmark;refseq 43;36;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. CVM 22462 extrachromosomal linear Cluster_11 Gammaproteobacteria_gi_418828274 hallmark;refseq 18;16;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. CVM 22462 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_418828869-8047-27221 hallmark;refseq;vdb 31;25;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. CVM 22462 prophage linear Cluster_0 Gammaproteobacteria_gi_418829466 refseq 19;15;;4 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_418829763 hallmark;refseq 27;25;2; Viruses;unclassified phages;;;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_418832519-0-15756 hallmark;refseq 18;15;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 prophage linear Cluster_22 Gammaproteobacteria_gi_418833777 hallmark;refseq 25;24;1; Viruses;unclassified phages;;;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_418833810-0-15708 hallmark;refseq 17;15;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. CVM N1543 prophage linear Cluster_22 Gammaproteobacteria_gi_418836969 hallmark;refseq 25;23;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. CVM N1543 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_418837001 hallmark;refseq 24;23;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. CVM N1543 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_418837936 refseq 18;18;; Viruses;unclassified phages;;;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. CVM N1543 extrachromosomal linear Cluster_82 Gammaproteobacteria_gi_418838057 refseq 19;15;;4 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. CVM N1543 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_418838193-79894-110599 hallmark;refseq 39;34;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. CVM N1543 prophage linear Cluster_0 Gammaproteobacteria_gi_418841510-57805-92015 hallmark;refseq 41;38;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. CVM 21554 prophage linear Cluster_0 Gammaproteobacteria_gi_418845847-0-38628 hallmark;refseq;vdb 52;27;11;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. CVM 19443 prophage linear Cluster_28 Gammaproteobacteria_gi_418846662-28558-69736 hallmark;refseq 56;48;1;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. CVM 19443 prophage linear Cluster_7 Gammaproteobacteria_gi_418851222-57803-92013 hallmark;refseq 41;38;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. CVM 37978 prophage linear Cluster_0 Gammaproteobacteria_gi_418856355-42766-75085 hallmark;refseq 40;38;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. CVM 19593 prophage linear Cluster_0 Gammaproteobacteria_gi_418859395-48846-89441 hallmark;refseq 55;46;3;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. CVM 19470 prophage linear Cluster_7 Gammaproteobacteria_gi_418859683 hallmark;refseq 13;13;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. CVM 19470 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_418859727 refseq 10;8;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. CVM 19470 extrachromosomal linear Cluster_47 Gammaproteobacteria_gi_418859751-52248-66309 hallmark;refseq 17;13;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. CVM 19470 prophage linear Cluster_22 Gammaproteobacteria_gi_418868004 hallmark;refseq 32;23;3;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. CVM 4176 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_418870299 refseq 21;9;7;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. CVM 4176 extrachromosomal linear Cluster_225 Gammaproteobacteria_gi_418958901 hallmark;refseq 23;20;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli J53 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_418995354 refseq 13;9;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC1A extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_418995773 refseq 21;16;5; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC1A extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_418997139 hallmark;refseq 22;17;5; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC1A extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_418997163-0-12021 hallmark;refseq 12;10;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC1A prophage linear Cluster_10 Gammaproteobacteria_gi_418997889 refseq 17;14;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC1A extrachromosomal linear Cluster_398 Gammaproteobacteria_gi_418998292 refseq 21;10;4;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC1A extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_418999518-54096-82209 hallmark;refseq 40;31;7;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC1A prophage linear Cluster_10 Gammaproteobacteria_gi_419000375 hallmark;refseq 16;10;6; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC1B extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419000917 refseq 20;18;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC1B extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419001067-893-30952 hallmark;refseq 42;34;4;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC1B prophage linear Cluster_0 Gammaproteobacteria_gi_419002438 refseq 9;5;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC1B extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_419005648 refseq 13;12;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC1C extrachromosomal linear Cluster_353 Gammaproteobacteria_gi_419007120 hallmark;refseq 34;25;8;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC1C extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_419007402 refseq 21;12;8;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC1C extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_419007655 hallmark;refseq 80;70;2;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC1C extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_419007736 hallmark;refseq 13;12;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Punalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC1C extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_419008166-85772-103612 hallmark;refseq 18;14;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC1C prophage linear Cluster_2 Gammaproteobacteria_gi_419011163 hallmark;refseq 18;13;5; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC1D extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419011907 refseq 22;14;4;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC1D extrachromosomal linear Cluster_398 Gammaproteobacteria_gi_419013305 hallmark;refseq 78;43;18;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC1D extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_419015305-31581-67186 hallmark;refseq 51;49;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC1D prophage linear Cluster_3 Gammaproteobacteria_gi_419016229-53909-81111 hallmark;refseq 38;31;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC1D prophage linear Cluster_10 Gammaproteobacteria_gi_419017234 hallmark;refseq 25;22;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC1E extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419017264 refseq 17;15;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC1E extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_419017283 refseq 15;8;7; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC1E extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_419018350 hallmark;refseq 17;12;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC1E extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_419018789-0-65766 hallmark;refseq 94;71;13;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC1E prophage linear Cluster_21 Gammaproteobacteria_gi_419021800 hallmark;refseq 18;13;5; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC2A extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419022414 refseq 20;17;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC2A extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419022907-86039-117070 hallmark;refseq 44;36;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC2A prophage linear Cluster_0 Gammaproteobacteria_gi_419023771 refseq;vdb 20;12;7;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC2A extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_419023792 hallmark;refseq 23;15;7;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC2A extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_419026609-52727-83028 hallmark;refseq 43;35;6;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC2A prophage linear Cluster_1 Gammaproteobacteria_gi_419027191-0-10283 refseq;vdb 12;10;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC2C prophage linear Cluster_47 Gammaproteobacteria_gi_419027726 hallmark;refseq 35;28;3;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC2C extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_419027863-973-30408 hallmark;refseq 40;32;5;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC2C prophage linear Cluster_0 Gammaproteobacteria_gi_419028384 hallmark;refseq 17;10;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC2C extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_419028408 hallmark;refseq 29;22;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC2C extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_419028521 refseq 11;10;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC2C extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_419028750 hallmark;refseq 15;10;5; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC2C extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419028945 hallmark;refseq 100;86;6;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC2C extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_419033576-272955-314629 hallmark;refseq 58;49;8;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC2D prophage linear Cluster_2 Gammaproteobacteria_gi_419034387 hallmark;refseq 11;8;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC2D extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419034851-54108-101048 hallmark;refseq 64;49;12;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC2D prophage linear Cluster_1 Gammaproteobacteria_gi_419037966 hallmark;refseq 15;13;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC2E extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419038489 hallmark;refseq 32;29;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC2E extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419038523 refseq 35;25;7;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC2E extrachromosomal linear Cluster_398 Gammaproteobacteria_gi_419039173 hallmark;refseq 21;17;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC2E extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_419043140 refseq 18;17;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC3A extrachromosomal linear Cluster_252 Gammaproteobacteria_gi_419044210 hallmark;refseq 19;16;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC3A extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_419044635 refseq 23;10;8;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC3A extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_419044669 hallmark;refseq 17;15;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC3A extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419044946 hallmark;refseq 19;14;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC3A extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419044967 hallmark;refseq 18;15;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC3A extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419045076 hallmark;refseq 22;15;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC3A extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419045748 hallmark;refseq 37;21;7;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC3A extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_419046042 hallmark;refseq 14;8;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC3A extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_419046058 hallmark;refseq 49;44;5; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC3A extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_419049946 refseq 20;18;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC3B extrachromosomal linear Cluster_252 Gammaproteobacteria_gi_419049995-0-33163 hallmark;refseq 33;32;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC3B prophage linear Cluster_5 Gammaproteobacteria_gi_419050204 hallmark;refseq 19;15;1;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC3B extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_419050506 refseq 18;13;5; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC3B extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_419050851 hallmark;refseq 14;11;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC3B extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419051035 hallmark;refseq 18;13;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC3B extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_419051554 hallmark;refseq 34;18;7;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC3B extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_419052333 hallmark;refseq 23;17;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC3B extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_419055869 refseq 24;10;9;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC3C extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_419055980 refseq 35;32;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC3C extrachromosomal linear Cluster_252 Gammaproteobacteria_gi_419056012 hallmark;refseq 35;35;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC3C extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_419056368 hallmark;refseq 19;12;2;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC3C extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_419056474 refseq 13;10;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC3C extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419056632 hallmark;refseq 25;16;9; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC3C extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_419056658 hallmark;refseq 17;13;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC3C extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419056868 hallmark;refseq 21;16;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC3C extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419057780 hallmark;refseq 17;14;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC3C extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_419057803 hallmark;refseq 40;27;5;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC3C extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_419061543-0-38091 hallmark;refseq 40;40;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC3D prophage linear Cluster_5 Gammaproteobacteria_gi_419061779 hallmark;refseq 15;13;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC3D extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_419061805-0-25422 hallmark;refseq 32;8;16;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC3D prophage linear Cluster_33 Gammaproteobacteria_gi_419061805-36613-64275 hallmark;refseq 37;30;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC3D prophage linear Cluster_1 Gammaproteobacteria_gi_419062249 refseq 14;9;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC3D extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_419067096 hallmark;refseq 24;20;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC3E extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_419068541 hallmark;refseq 15;13;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC3E extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419068806 hallmark;refseq 20;16;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC3E extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_419068837 refseq 30;18;10;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC3E extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_419070005-56185-68198 hallmark;refseq;vdb 12;8;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC3E prophage linear Cluster_0 Gammaproteobacteria_gi_419070064-471-23413 hallmark;refseq 33;25;4;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC3E prophage linear Cluster_0 Gammaproteobacteria_gi_419070154 hallmark;refseq 21;19;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC3E extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_419070182 refseq 27;20;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC3E extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419073900-207954-238398 hallmark;refseq 41;35;6; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC3F prophage linear Cluster_0 Gammaproteobacteria_gi_419074258 hallmark;refseq 14;11;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC3F extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_419074353 refseq 26;10;3;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC3F extrachromosomal linear Cluster_493 Gammaproteobacteria_gi_419074373 refseq 18;16;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC3F extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419074396 refseq 17;13;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC3F extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419074566 refseq 13;8;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC3F extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_419074798 refseq;vdb 35;22;13; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC3F extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_419075147 hallmark;refseq 13;7;6; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC3F extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419075316 refseq 12;9;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC3F extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_419075904 refseq 19;15;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC3F extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_419075924-581-14987 hallmark;refseq 18;15;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC3F prophage linear Cluster_2 Gammaproteobacteria_gi_419079429 refseq 15;11;1;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC4A extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_419079965 refseq 14;8;6; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC4A extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_419079983 hallmark;refseq 19;17;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC4A extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419080008 hallmark;refseq 36;27;6;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC4A extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419080446 hallmark;refseq 20;17;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC4A extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419080474 refseq 13;9;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC4A extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_419083173-74737-86167 hallmark;refseq 15;13;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC4A prophage linear Cluster_0 Gammaproteobacteria_gi_419084768 hallmark;refseq 23;17;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC4B extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_419085125 hallmark;refseq 25;21;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC4B extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419085554 hallmark;refseq 17;14;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC4B extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419085587 refseq 11;7;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC4B extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_419085758 refseq 26;16;10; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC4B extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_419085821 hallmark;refseq 15;10;5; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC4B extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_419086183 hallmark;refseq 18;14;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC4B extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_419086711 hallmark;refseq 20;16;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC4B extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419086854-58244-89741 hallmark;refseq 44;35;5;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC4B prophage linear Cluster_0 Gammaproteobacteria_gi_419087016 refseq 33;23;8;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC4B extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419087170-171875-211530 hallmark;refseq 44;43;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC4B prophage linear Cluster_5 Gammaproteobacteria_gi_419090729-79785-108043 hallmark;refseq 37;29;6;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC4C prophage linear Cluster_2 Gammaproteobacteria_gi_419091112 hallmark;refseq 20;19;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC4C extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_419091483-41-7831 refseq 9;6;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC4C prophage linear Cluster_4 Gammaproteobacteria_gi_419091775 refseq 13;8;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC4C extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_419091792 hallmark;refseq 16;13;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC4C extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419092825 hallmark;refseq 28;20;6;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC4C extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419093066 hallmark;refseq 17;13;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC4C extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_419094995-114138-135604 hallmark;refseq 31;26;5; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC4C prophage linear Cluster_0 Gammaproteobacteria_gi_419095158-5-10027 hallmark;refseq 10;8;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC4C prophage linear Cluster_0 Gammaproteobacteria_gi_419096698 hallmark;refseq 25;20;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC4D extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_419097077 hallmark;refseq 18;17;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC4D extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_419097492-0-16045 hallmark;refseq 21;18;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC4D prophage linear Cluster_4 Gammaproteobacteria_gi_419097492-52218-65413 hallmark;refseq 21;15;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC4D prophage linear Cluster_1 Gammaproteobacteria_gi_419097582 hallmark;refseq 17;15;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC4D extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419097729 refseq 34;23;11; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC4D extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_419098101 refseq 20;14;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC4D extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_419098120 refseq 15;12;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC4D extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_419098803 refseq 21;20;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC4D extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_419099124-104036-121320 hallmark;refseq 19;18;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC4D prophage linear Cluster_7 Gammaproteobacteria_gi_419099245-0-28844 hallmark;refseq 44;43;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC4D prophage linear Cluster_7 Gammaproteobacteria_gi_419103330 hallmark;refseq 17;14;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC4E extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419103541 refseq 32;20;11;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC4E extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_419103604 hallmark;refseq 15;10;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC4E extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419103847 refseq 18;9;3;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC4E extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_419104445-58164-89675 hallmark;refseq 43;35;5;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC4E prophage linear Cluster_0 Gammaproteobacteria_gi_419108275 refseq 23;10;8;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC4F extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_419108304 hallmark;refseq 18;18;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC4F extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_419108338 hallmark;refseq 23;20;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC4F extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419108739 hallmark;refseq 25;20;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC4F extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419108938 refseq 32;20;12; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC4F extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_419109888 hallmark;refseq 33;27;6; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC4F extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_419113024-419953-451030 hallmark;refseq 46;39;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC5A prophage linear Cluster_1 Gammaproteobacteria_gi_419114421 hallmark;refseq 27;19;7;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC5A extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419114669 hallmark;refseq 19;12;7; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC5A extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419115192 hallmark;refseq 17;14;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC5A extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419118057-83285-122778 hallmark;refseq 52;39;10;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC5A prophage linear Cluster_2 Gammaproteobacteria_gi_419118994 hallmark;refseq 37;31;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC5B extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419119193-76211-113984 hallmark;refseq 48;36;9;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC5B prophage linear Cluster_1 Gammaproteobacteria_gi_419120273 refseq 12;8;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC5B extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419120288 hallmark;refseq 22;17;5; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC5B extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419120829 hallmark;refseq 20;16;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC5B extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419124692 hallmark;refseq 40;34;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC5C extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419124995 hallmark;refseq 37;27;10; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC5C extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_419125634 hallmark;refseq 26;21;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC5C extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_419125671-119528-158923 hallmark;refseq 49;32;12;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC5C prophage linear Cluster_10 Gammaproteobacteria_gi_419127143 refseq 20;16;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC5C extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419129770-69658-80835 refseq 20;14;6; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC5D prophage linear Cluster_1 Gammaproteobacteria_gi_419129878-356156-378836 hallmark;refseq 34;25;6;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC5D prophage linear Cluster_1 Gammaproteobacteria_gi_419130247 hallmark;refseq 19;18;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC5D extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419130526 hallmark;refseq 29;22;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC5D extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_419131216 refseq 11;8;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC5D extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419131442 hallmark;refseq 20;14;6; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC5D extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419134353-57455-82760 hallmark;refseq 35;31;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC5D prophage linear Cluster_1 Gammaproteobacteria_gi_419134533 refseq 30;28;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC5E extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_419134975-277179-305331 hallmark;refseq 33;26;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC5E prophage linear Cluster_2 Gammaproteobacteria_gi_419135931-67573-81037 hallmark;refseq 19;13;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC5E prophage linear Cluster_10 Gammaproteobacteria_gi_419139214-75488-97671 hallmark;refseq 33;28;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC5E prophage linear Cluster_0 Gammaproteobacteria_gi_419140573 hallmark;refseq 84;69;7;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC6A extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_419141894-621508-664663 hallmark;refseq 65;33;13;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC6A prophage linear Cluster_28 Gammaproteobacteria_gi_419142652 hallmark;refseq 33;23;7;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC6A extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_419145561 hallmark;refseq 13;12;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC6A extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419145630 refseq 24;23;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC6A extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_419145794 hallmark;refseq 70;36;14;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC6A extrachromosomal linear Cluster_48 Gammaproteobacteria_gi_419145910 hallmark;refseq 53;25;20;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC6A extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419148051 refseq 15;9;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC6B extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419148319 hallmark;refseq 17;10;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC6B extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_419148805 hallmark;refseq 20;12;6;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC6B extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419151683 refseq 17;10;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC6C extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_419157166 refseq 14;9;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC6D extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_419158929 noncaudo 25;10;7;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC6D extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_419159027-16483-45043 hallmark;refseq 29;27;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC6D prophage linear Cluster_5 Gammaproteobacteria_gi_419160320 hallmark;refseq 19;17;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC6D extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419162942-71226-85978 hallmark;refseq 25;21;1;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC6E prophage linear Cluster_1 Gammaproteobacteria_gi_419164174-21345-68041 hallmark;refseq 61;45;10;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC6E prophage linear Cluster_5 Gammaproteobacteria_gi_419167733 refseq 19;15;1;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC7A extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_419167805 hallmark;refseq 50;42;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC7A extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_419172543 refseq 31;24;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC7A extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_419173575-39598-75441 hallmark;refseq 53;45;2;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC7B prophage linear Cluster_3 Gammaproteobacteria_gi_419174316-72525-84003 hallmark;refseq 16;12;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC7B prophage linear Cluster_0 Gammaproteobacteria_gi_419180507-112824-136897 hallmark;refseq 25;19;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC7C prophage linear Cluster_2 Gammaproteobacteria_gi_419180698-355-67894 hallmark;refseq 69;59;5;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC7C prophage linear Cluster_16 Gammaproteobacteria_gi_419181892-32698-65344 hallmark;refseq 41;35;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC7C prophage linear Cluster_0 Gammaproteobacteria_gi_419183108 refseq 32;24;6;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC7C extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_419184717 hallmark;refseq 68;57;6;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC7D extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_419186159-0-19120 hallmark;refseq 22;18;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC7D prophage linear Cluster_2 Gammaproteobacteria_gi_419187342-27528-60174 hallmark;refseq 40;35;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC7D prophage linear Cluster_0 Gammaproteobacteria_gi_419188868 refseq 30;24;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC7D extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_419189989-113-46503 refseq 45;37;4;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC7E prophage linear Cluster_16 Gammaproteobacteria_gi_419191446-350-20261 hallmark;refseq 22;18;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC7E prophage linear Cluster_2 Gammaproteobacteria_gi_419193770 refseq 21;17;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Punalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC7E extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_419194732 hallmark;refseq 35;30;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Punalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC7E extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_419194772 hallmark;refseq 16;8;7;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC7E extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_419195288-3629-25930 hallmark;refseq 34;31;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC8A prophage linear Cluster_19 Gammaproteobacteria_gi_419195328 hallmark;refseq 21;17;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC8A extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_419195354 refseq 14;12;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC8A extrachromosomal linear Cluster_19 Gammaproteobacteria_gi_419196871 hallmark;refseq 24;15;8;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC8A extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419197410 refseq 35;21;10;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC8A extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_419198140 refseq 40;33;3;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC8A extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_419200506 refseq 20;18;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Punalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC8A extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_419200645 refseq 16;12;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC8A extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_419200803 refseq 15;11;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC8A extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_419200830 hallmark;refseq 27;17;7;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC8A extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419200883 hallmark;refseq 16;15;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC8A extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_419200913 refseq 18;16;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC8A extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_419200968 refseq 21;11;6;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC8A extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_419201043 hallmark;refseq 49;42;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC8A extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_419201884 hallmark;refseq 23;17;6; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC8B extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419201909 refseq;vdb 20;10;9;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC8B extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_419202495 hallmark;refseq 15;14;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC8B extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_419202698 hallmark;refseq 24;18;6; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC8B extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419203307 hallmark;refseq 21;16;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC8B extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_419203812 hallmark;refseq 53;36;13;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC8B extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_419204164-101669-125646 hallmark;refseq 32;17;5;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC8B prophage linear Cluster_0 Gammaproteobacteria_gi_419204296-0-61726 hallmark;refseq 72;70;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC8B prophage linear Cluster_5 Gammaproteobacteria_gi_419206684 hallmark;refseq 25;19;4;2 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC8B extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_419207571 hallmark;refseq 16;14;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC8C extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419207879 hallmark;refseq 17;12;5; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC8C extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419208230 hallmark;refseq 91;80;5;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC8C extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_419208332 refseq 20;16;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC8C extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_419208689-8812-22297 hallmark 23;8;9;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC8C prophage linear Cluster_33 Gammaproteobacteria_gi_419208910 hallmark;refseq 21;17;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC8C extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419210060 refseq 18;16;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC8C extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419210079-7965-45465 hallmark;refseq 45;32;3;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC8C prophage linear Cluster_79 Gammaproteobacteria_gi_419210404 refseq 18;13;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC8C extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419210851 refseq 24;20;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC8C extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_419213154 refseq 59;33;17;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC8C extrachromosomal linear Cluster_79 Gammaproteobacteria_gi_419213236 refseq 19;14;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Punalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC8C extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_419214049-38068-59157 hallmark;refseq 33;22;6;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC8D prophage linear Cluster_1 Gammaproteobacteria_gi_419214408 hallmark;refseq 17;12;5; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC8D extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419215110 refseq 16;12;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC8D extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_419215350 hallmark;refseq 23;21;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC8D extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_419215746 hallmark;refseq 14;11;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC8D extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_419220315 hallmark 16;8;4;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC8E extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_419220782 hallmark;refseq 32;19;4;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC8E extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_419220816 hallmark;refseq 18;13;5; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC8E extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419221211 hallmark;refseq 25;20;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC8E extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_419221813 hallmark;refseq 17;12;5; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC8E extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419221831 hallmark;refseq 21;15;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC8E extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_419221855-177740-196817 hallmark;refseq 23;18;3;2 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC8E prophage linear Cluster_4 Gammaproteobacteria_gi_419225531 refseq 13;10;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC9A extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_419225753 hallmark;refseq 14;10;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC9A extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419226007 hallmark;refseq 15;12;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC9A extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_419226035 hallmark;refseq 25;20;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC9A extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_419226066 refseq 33;14;13;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC9A extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_419226754-1031-18803 hallmark;refseq 23;16;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC9A prophage linear Cluster_0 Gammaproteobacteria_gi_419227094 hallmark;refseq 15;12;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC9A extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_419227420 hallmark;refseq 21;14;7; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC9A extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419227632 hallmark;refseq 22;20;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC9A extrachromosomal linear Cluster_11 Gammaproteobacteria_gi_419229659-35151-56987 hallmark;refseq 35;29;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC9A prophage linear Cluster_2 Gammaproteobacteria_gi_419229737-111-17551 refseq;vdb 21;17;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC9A prophage linear Cluster_47 Gammaproteobacteria_gi_419230157-0-6708 refseq 6;6;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC9A prophage linear Cluster_4 Gammaproteobacteria_gi_419230280 hallmark;refseq 14;13;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC9B extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_419230323 refseq 14;10;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC9B extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_419230395 hallmark;refseq 17;14;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC9B extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_419230447 hallmark;refseq 24;21;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC9B extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_419233106-0-26751 hallmark;refseq 44;35;9; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC9B prophage linear Cluster_1 Gammaproteobacteria_gi_419233308-160499-203361 hallmark;refseq 62;52;4;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC9B prophage linear Cluster_7 Gammaproteobacteria_gi_419236181-208519-229106 hallmark;refseq 34;23;6;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC9C prophage linear Cluster_1 Gammaproteobacteria_gi_419236668 refseq 25;16;5;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC9C extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419236690 hallmark;refseq 16;12;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC9C extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419237096 hallmark;refseq 15;9;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC9C extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_419237152 hallmark;refseq 18;16;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC9C extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_419237244 refseq 18;14;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC9C extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419237619 hallmark;refseq 45;20;18;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC9C extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_419238533-126698-168685 hallmark;refseq 63;53;5;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC9C prophage linear Cluster_11 Gammaproteobacteria_gi_419241153 hallmark;refseq 19;17;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC9D extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419241176 hallmark;refseq 23;18;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC9D extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419241398 hallmark;refseq 20;16;1;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC9D extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_419243955-0-29207 hallmark;refseq 43;32;8;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC9D prophage linear Cluster_1 Gammaproteobacteria_gi_419244490-11930-45332 hallmark;refseq 40;37;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC9D prophage linear Cluster_0 Gammaproteobacteria_gi_419245950-75851-105542 hallmark;refseq 43;35;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC9D prophage linear Cluster_0 Gammaproteobacteria_gi_419246168-62582-88237 hallmark;refseq 39;32;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC9D prophage linear Cluster_2 Gammaproteobacteria_gi_419247407 hallmark;refseq 21;17;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC9E extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419247428 hallmark;refseq 18;15;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC9E extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419247713-9610-25777 hallmark;refseq 16;13;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC9E prophage linear Cluster_1 Gammaproteobacteria_gi_419247746 hallmark;refseq 22;15;7; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC9E extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419248187 hallmark;refseq 13;13;; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC9E extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419248203 hallmark;refseq 18;15;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC9E extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419248270 hallmark;refseq 36;32;1;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC9E extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_419248768-114325-138326 hallmark;refseq 25;19;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC9E prophage linear Cluster_2 Gammaproteobacteria_gi_419249777-156980-180310 hallmark;refseq;vdb 24;21;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC9E prophage linear Cluster_11 Gammaproteobacteria_gi_419249777-1666-31481 hallmark;refseq 44;35;8;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC9E prophage linear Cluster_1 Gammaproteobacteria_gi_419249975 refseq 35;29;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC9E extrachromosomal linear Cluster_23 Gammaproteobacteria_gi_419250340 refseq 34;19;7;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC9E extrachromosomal linear Cluster_79 Gammaproteobacteria_gi_419253171 refseq 27;17;4;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC10A extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419253454 refseq 23;18;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC10A extrachromosomal linear Cluster_19 Gammaproteobacteria_gi_419253478 hallmark;refseq 22;15;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC10A extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419253811 hallmark;refseq 16;14;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC10A extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_419254119 hallmark;refseq 23;19;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC10A extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_419254143-43973-76735 hallmark;refseq 57;50;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC10A prophage linear Cluster_4 Gammaproteobacteria_gi_419254615 hallmark;refseq 15;13;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC10A extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419255629 refseq 15;12;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC10A extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_419255645 hallmark;refseq 29;22;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC10A extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419259921 hallmark;refseq 18;15;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC10B extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_419260268 refseq 19;17;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC10B extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419260294 refseq 36;30;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC10B extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_419260337 hallmark;refseq 20;17;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC10B extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_419261282 refseq 22;14;4;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC10B extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_419261863 refseq 36;32;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC10B extrachromosomal linear Cluster_23 Gammaproteobacteria_gi_419261900-132801-156316 hallmark;refseq 25;21;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC10B prophage linear Cluster_11 Gammaproteobacteria_gi_419262063 refseq 20;14;2;4 Viruses;unclassified;unclassified;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC10B extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_419262248-0-36972 hallmark;refseq 49;43;1;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC10B prophage linear Cluster_7 Gammaproteobacteria_gi_419264867-323513-343192 hallmark;refseq 31;21;6;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC10C prophage linear Cluster_1 Gammaproteobacteria_gi_419265500 refseq 24;17;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC10C extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_419265520 refseq 24;19;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC10C extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_419265776 refseq 22;14;5;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC10C extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_419265810 hallmark;refseq 18;15;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC10C extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419265831 hallmark;refseq 61;35;17;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC10C extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_419265907 refseq 10;9;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC10C extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_419266172 hallmark;refseq 18;14;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC10C extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_419266251 hallmark;refseq 16;13;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC10C extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_419266888 hallmark;refseq 15;12;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC10C extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419267215 hallmark;refseq 24;17;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC10C extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419267249 refseq 17;9;4;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC10C extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_419267841 hallmark;refseq 16;10;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC10C extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419268380 hallmark;refseq 15;13;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC10C extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_419268401-0-20385 refseq 29;25;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC10C prophage linear Cluster_10 Gammaproteobacteria_gi_419269560-95747-164990 hallmark;refseq 72;39;20;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC10C prophage linear Cluster_3 Gammaproteobacteria_gi_419270477-384393-405747 hallmark;refseq 34;23;6;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC10D prophage linear Cluster_1 Gammaproteobacteria_gi_419271234 hallmark;refseq 16;10;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC10D extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419271565 hallmark;refseq 17;15;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC10D extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419271843 refseq 26;12;11;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC10D extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_419273358 hallmark;refseq 33;25;6;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC10D extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419273867 hallmark;refseq 28;21;7; Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC10D extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_419276689 hallmark;refseq 31;25;6; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC10E extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419278115 hallmark 23;6;6;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC10E extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_419278140 hallmark;refseq 21;13;7;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC10E extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_419280258-21899-54835 hallmark;refseq 40;33;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC10E prophage linear Cluster_0 Gammaproteobacteria_gi_419282355-37650-59514 hallmark;refseq 34;23;6;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC10F prophage linear Cluster_1 Gammaproteobacteria_gi_419282433 hallmark;refseq 16;15;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC10F extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419282997 hallmark;refseq 17;16;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC10F extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_419283018 hallmark;refseq 18;14;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC10F extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_419284141-44497-88015 hallmark;refseq 60;25;24;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC10F prophage linear Cluster_28 Gammaproteobacteria_gi_419284835 hallmark;refseq 19;14;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC10F extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_419284855 hallmark;refseq 18;12;6; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC10F extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419284875-0-24584 hallmark;refseq 39;32;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC10F prophage linear Cluster_1 Gammaproteobacteria_gi_419287247 hallmark;refseq 97;85;4;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC10F extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_419287465 hallmark;refseq 19;18;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC10F extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_419288258 hallmark;refseq 30;20;10; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC11A extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419288612 hallmark;refseq 29;25;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC11A extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419288644-14288-35167 hallmark;refseq 23;18;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC11A prophage linear Cluster_2 Gammaproteobacteria_gi_419289167 refseq 31;19;6;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC11A extrachromosomal linear Cluster_19 Gammaproteobacteria_gi_419289202 hallmark;refseq 27;22;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC11A extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_419290543-71509-106314 hallmark;refseq;vdb 46;38;7;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC11A prophage linear Cluster_0 Gammaproteobacteria_gi_419293604 hallmark;refseq 17;12;5; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC11B extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419293622 hallmark;refseq 15;11;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC11B extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419293893 hallmark;refseq 27;21;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC11B extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419294142 hallmark;refseq 40;33;7; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC11B extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419294225 hallmark;refseq 17;11;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC11B extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_419294711-387-20254 hallmark;refseq 21;17;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC11B prophage linear Cluster_2 Gammaproteobacteria_gi_419295780 hallmark;refseq 46;36;4;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC11B extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_419297346-71368-103128 hallmark;refseq 45;39;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC11B prophage linear Cluster_0 Gammaproteobacteria_gi_419298428 refseq 18;16;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC11C extrachromosomal linear Cluster_252 Gammaproteobacteria_gi_419299325-14180-23564 refseq;vdb 18;14;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC11C prophage linear Cluster_5 Gammaproteobacteria_gi_419299361-0-36890 hallmark;refseq 43;42;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC11C prophage linear Cluster_5 Gammaproteobacteria_gi_419300054 hallmark;refseq 27;19;8; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC11C extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419300625-157109-188469 hallmark;refseq 38;25;7;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC11C prophage linear Cluster_0 Gammaproteobacteria_gi_419303645 hallmark;refseq 17;15;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC11C extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_419303677 refseq 26;16;7;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC11C extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419303714 refseq 25;11;9;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC11C extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_419303998 hallmark;refseq 19;12;7; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC11C extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419304093 hallmark;refseq 29;19;6;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC11D extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419304173 hallmark;refseq 14;12;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC11D extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419304190 hallmark;refseq 20;14;6; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC11D extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419304365 hallmark;refseq 30;25;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC11D extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_419304425 hallmark;refseq 28;23;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC11D extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_419304746 hallmark;refseq 27;21;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC11D extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419304774-297580-321961 hallmark;refseq 32;22;10; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC11D prophage linear Cluster_1 Gammaproteobacteria_gi_419306180 refseq 17;10;3;4 Viruses;unclassified;unclassified;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC11D extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_419306784-129704-161063 hallmark;refseq 38;23;7;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC11D prophage linear Cluster_0 Gammaproteobacteria_gi_419308883-73414-104461 hallmark;refseq 42;35;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC11D prophage linear Cluster_0 Gammaproteobacteria_gi_419311699 refseq 22;14;8; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC11E extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419311795-138517-169873 hallmark;refseq 41;24;7;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC11E prophage linear Cluster_0 Gammaproteobacteria_gi_419313848-73291-104339 hallmark;refseq 42;35;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC11E prophage linear Cluster_0 Gammaproteobacteria_gi_419314462 hallmark;vdb 33;15;11;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC11E extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_419314506 hallmark;refseq 35;30;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC11E extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419314547 hallmark;refseq 25;20;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC11E extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_419314578 hallmark;refseq 16;15;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC11E extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419314654 hallmark;refseq 14;9;5; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC11E extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419315085 hallmark;refseq 15;10;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC12A extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419317237-16728-48083 hallmark;refseq;vdb 39;22;8;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC12A prophage linear Cluster_0 Gammaproteobacteria_gi_419319952 hallmark;refseq 16;12;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC12A extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419320014 refseq 11;7;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC12A extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_419320026 refseq 53;27;11;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC12A extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_419320084 refseq 13;10;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC12A extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419320100 hallmark 23;8;4;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC12A extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_419320129 hallmark;refseq 16;11;5; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC12A extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_419320191 hallmark 25;9;5;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC12A extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_419320257 hallmark;refseq 70;45;8;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC12A extrachromosomal linear Cluster_79 Gammaproteobacteria_gi_419320375 hallmark;refseq 19;15;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC12A extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419321181-22280-55635 hallmark;refseq 48;40;7;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC12B prophage linear Cluster_1 Gammaproteobacteria_gi_419321531 hallmark;refseq 63;58;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC12B extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_419321596 refseq 11;10;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC12B extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_419322454 hallmark;refseq 22;16;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC12B extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419322517-22641-29776 noncaudo 10;2;1;7 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC12B prophage linear Cluster_51 Gammaproteobacteria_gi_419322928 hallmark;refseq 13;10;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC12B extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_419322998 hallmark;refseq 28;15;8;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC12B extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_419323524 hallmark;refseq 15;11;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC12B extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419324015-0-71426 hallmark;refseq;vdb 45;24;12;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC12B prophage linear Cluster_0 Gammaproteobacteria_gi_419324093 hallmark;refseq 77;67;2;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC12B extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_419326563 hallmark;refseq 19;15;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC12C extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_419326709 hallmark;refseq 16;12;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC12C extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_419327133-302415-331309 hallmark;refseq 42;35;7; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC12C prophage linear Cluster_1 Gammaproteobacteria_gi_419328618 refseq 12;8;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC12C extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_419328986-46564-76825 hallmark;refseq 40;33;3;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC12C prophage linear Cluster_3 Gammaproteobacteria_gi_419329389-44894-76244 hallmark;refseq 39;23;8;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC12C prophage linear Cluster_0 Gammaproteobacteria_gi_419332875 hallmark;refseq 39;32;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC12D extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419332914-238356-267435 hallmark;refseq 43;33;7;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC12D prophage linear Cluster_1 Gammaproteobacteria_gi_419333201 hallmark;refseq 59;56;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC12D extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_419333801 hallmark;refseq 21;16;5; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC12D extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419334565 hallmark;refseq 18;15;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC12D extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_419335373 refseq 18;13;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC12D extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_419337737 hallmark;refseq;vdb 39;20;10;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC12D extrachromosomal linear Cluster_28 Gammaproteobacteria_gi_419338217 refseq 35;26;6;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC12E extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_419338251-37651-69179 hallmark;refseq 46;38;8; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC12E prophage linear Cluster_1 Gammaproteobacteria_gi_419339415 hallmark;refseq 33;28;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC12E extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_419340469-17159-48519 hallmark;refseq 37;23;7;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC12E prophage linear Cluster_0 Gammaproteobacteria_gi_419343096 refseq 17;11;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC12E extrachromosomal linear Cluster_79 Gammaproteobacteria_gi_419343145 refseq 9;5;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC12E extrachromosomal linear Cluster_79 Gammaproteobacteria_gi_419343179 hallmark;refseq 20;9;;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Punalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC12E extrachromosomal linear Cluster_79 Gammaproteobacteria_gi_419343259 hallmark;refseq 15;10;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC12E extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419343445 hallmark;refseq 17;12;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC13A extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_419345288 hallmark;refseq 23;16;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC13A extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_419346240-13156-40748 hallmark;refseq 39;34;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC13A prophage linear Cluster_0 Gammaproteobacteria_gi_419347711 hallmark;refseq 35;24;9;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC13A extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_419350700-18152-45745 hallmark;refseq 39;34;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC13B prophage linear Cluster_0 Gammaproteobacteria_gi_419352091-69898-102687 hallmark;refseq 42;34;6;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC13B prophage linear Cluster_0 Gammaproteobacteria_gi_419352924 refseq 15;10;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC13C extrachromosomal linear Cluster_19 Gammaproteobacteria_gi_419353676-74064-120370 hallmark;refseq 64;51;11;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC13C prophage linear Cluster_1 Gammaproteobacteria_gi_419355043 hallmark;refseq 21;14;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC13C extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_419355067 hallmark;refseq 22;14;6;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC13C extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_419355092 hallmark;refseq 20;14;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC13C extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_419355727-0-33068 hallmark;refseq 48;46;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC13C prophage linear Cluster_3 Gammaproteobacteria_gi_419357567-68047-100836 hallmark;refseq 42;34;7;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC13C prophage linear Cluster_0 Gammaproteobacteria_gi_419359008-75373-117598 hallmark;refseq 60;48;9;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC13D prophage linear Cluster_1 Gammaproteobacteria_gi_419360817-328-37035 hallmark;refseq 52;49;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC13D prophage linear Cluster_3 Gammaproteobacteria_gi_419362537-68777-101566 hallmark;refseq 42;34;7;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC13D prophage linear Cluster_0 Gammaproteobacteria_gi_419364077 hallmark;refseq 55;31;15;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC13E extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419364337 hallmark;refseq 53;45;7;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC13E extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419365894-0-33810 hallmark;refseq 50;48;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC13E prophage linear Cluster_3 Gammaproteobacteria_gi_419374558 hallmark;refseq 21;17;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC14B extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419374588-0-12262 hallmark;refseq 13;11;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC14B prophage linear Cluster_0 Gammaproteobacteria_gi_419374816 hallmark;refseq 29;21;8; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC14B extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_419378004-47643-80578 hallmark;refseq 43;34;7;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC14B prophage linear Cluster_0 Gammaproteobacteria_gi_419378719 hallmark;refseq 16;11;4;1 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC14C extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_419379795 hallmark;refseq 35;25;3;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC14C extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_419379831-0-10582 hallmark;refseq 10;9;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC14C prophage linear Cluster_0 Gammaproteobacteria_gi_419380831 hallmark;refseq 19;8;4;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC14C extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_419380852 hallmark;refseq 16;11;3;2 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC14C extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_419383483-243-10678 hallmark;refseq 10;8;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC14C prophage linear Cluster_0 Gammaproteobacteria_gi_419384963 hallmark;refseq 27;23;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC14D extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419385533-170080-201420 hallmark;refseq 47;45;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC14D prophage linear Cluster_3 Gammaproteobacteria_gi_419388684-11897-44835 hallmark;refseq 41;34;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC14D prophage linear Cluster_0 Gammaproteobacteria_gi_419391257 hallmark;refseq 19;13;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC15A extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_419392475-3117-10607 refseq 9;8;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC15A prophage linear Cluster_10 Gammaproteobacteria_gi_419393676-24637-56424 hallmark;refseq 42;35;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC15A prophage linear Cluster_0 Gammaproteobacteria_gi_419399246-74111-105896 hallmark;refseq 42;35;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC15B prophage linear Cluster_0 Gammaproteobacteria_gi_419404492-72671-95869 hallmark;refseq 32;27;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC15C prophage linear Cluster_0 Gammaproteobacteria_gi_419405979 hallmark;refseq 19;11;7;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC15D extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419406015-0-11085 hallmark;refseq 11;10;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC15D prophage linear Cluster_0 Gammaproteobacteria_gi_419407355-4-80481 hallmark;refseq 57;30;14;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC15D prophage linear Cluster_0 Gammaproteobacteria_gi_419408163 refseq 86;24;40;22 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC15D extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_419409656-74309-106093 hallmark;refseq 42;35;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC15D prophage linear Cluster_0 Gammaproteobacteria_gi_419411830-141467-183465 hallmark;refseq 57;45;10;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC15E prophage linear Cluster_1 Gammaproteobacteria_gi_419412861-26791-77111 hallmark;refseq 63;41;14;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC15E prophage linear Cluster_1 Gammaproteobacteria_gi_419415215-73944-97933 hallmark;refseq 33;28;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli DEC15E prophage linear Cluster_0 Gammaproteobacteria_gi_419701209-89393-133350 hallmark;refseq 57;51;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli SCI-07 prophage linear Cluster_7 Gammaproteobacteria_gi_419703370-0-68180 hallmark;refseq 42;28;8;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli SCI-07 prophage linear Cluster_0 Gammaproteobacteria_gi_419703560 hallmark;refseq 25;18;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli SCI-07 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_419728052-83908-125309 hallmark;refseq 56;47;3;6 Viruses;unclassified;unclassified;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Heidelberg str. 41579 prophage linear Cluster_1 Gammaproteobacteria_gi_419728545-72473-103347 hallmark;refseq 40;35;5; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Heidelberg str. 41579 prophage linear Cluster_0 Gammaproteobacteria_gi_419733014-20-41421 hallmark;refseq 57;47;4;6 Viruses;unclassified;unclassified;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Heidelberg str. 41563 prophage linear Cluster_1 Gammaproteobacteria_gi_419733483-66106-87528 hallmark;refseq 29;25;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Heidelberg str. 41563 prophage linear Cluster_0 Gammaproteobacteria_gi_419739349-19890-50296 hallmark;refseq 47;43;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Heidelberg str. 41573 prophage linear Cluster_11 Gammaproteobacteria_gi_419740402-147-30643 hallmark;refseq 45;38;2;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Heidelberg str. 41573 prophage linear Cluster_2 Gammaproteobacteria_gi_419740514-14700-31949 hallmark;refseq 24;22;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Heidelberg str. 41573 prophage linear Cluster_0 Gammaproteobacteria_gi_419741236 refseq 16;10;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Heidelberg str. 41573 extrachromosomal linear Cluster_158 Gammaproteobacteria_gi_419743162-66106-87376 hallmark;refseq 29;25;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Heidelberg str. 41566 prophage linear Cluster_0 Gammaproteobacteria_gi_419746076-11467-52867 hallmark;refseq 55;47;3;5 Viruses;unclassified phages;;;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Heidelberg str. 41566 prophage linear Cluster_1 Gammaproteobacteria_gi_419748103-43296-76548 hallmark;refseq 49;41;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Heidelberg str. 41565 prophage linear Cluster_2 Gammaproteobacteria_gi_419750860 hallmark;refseq 22;22;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Heidelberg str. 41565 extrachromosomal linear Cluster_11 Gammaproteobacteria_gi_419750935 refseq 12;7;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Heidelberg str. 41565 extrachromosomal linear Cluster_11 Gammaproteobacteria_gi_419750948 refseq;vdb 19;11;5;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Heidelberg str. 41565 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_419763800-481928-521392 hallmark;refseq 52;41;1;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae DSM 30104 prophage linear Cluster_7 Gammaproteobacteria_gi_419786339-0-15749 hallmark;refseq 18;15;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. Levine 1 prophage linear Cluster_22 Gammaproteobacteria_gi_419786446 hallmark;refseq 20;17;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. Levine 1 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419788485 hallmark;refseq 30;25;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. Levine 1 extrachromosomal linear Cluster_54 Gammaproteobacteria_gi_419789357-95197-137290 hallmark;refseq;vdb 56;52;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. Levine 1 prophage linear Cluster_3 Gammaproteobacteria_gi_419793055 hallmark;refseq 30;27;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. Levine 15 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419794184-44371-87171 hallmark;refseq;vdb 59;54;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. Levine 15 prophage linear Cluster_3 Gammaproteobacteria_gi_419794399 hallmark;refseq 44;32;7;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. Levine 15 extrachromosomal linear Cluster_54 Gammaproteobacteria_gi_419801614 noncaudo 11;3;1;7 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Haemophilus Haemophilus parainfluenzae HK262 extrachromosomal linear Cluster_51 Gammaproteobacteria_gi_419802204 noncaudo 11;4;;7 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Haemophilus Haemophilus parainfluenzae HK262 extrachromosomal linear Cluster_51 Gammaproteobacteria_gi_419806442 hallmark;refseq 34;21;8;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli AI27 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419806806-259-11025 hallmark;refseq 10;9;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli AI27 prophage linear Cluster_0 Gammaproteobacteria_gi_419807017 hallmark;refseq 22;16;1;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli AI27 extrachromosomal linear Cluster_26 Gammaproteobacteria_gi_419807471 hallmark;refseq 16;14;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli AI27 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419807500 refseq;vdb 16;14;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli AI27 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419809321-141751-173519 hallmark;refseq 40;35;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O32:H37 str. P4 prophage linear Cluster_0 Gammaproteobacteria_gi_419826465 noncaudo 10;3;3;4 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae CP1033(6) extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_419829349-721003-728584 hallmark;refseq 12;11;;1 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-1A2 prophage linear Cluster_14 Gammaproteobacteria_gi_419833634-3449-11030 hallmark;refseq 12;11;;1 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-61A2 prophage linear Cluster_14 Gammaproteobacteria_gi_419863662-117425-149566 hallmark;refseq 41;34;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O103:H25 str. CVM9340 prophage linear Cluster_0 Gammaproteobacteria_gi_419866561 hallmark;refseq 21;16;5; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O103:H25 str. CVM9340 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_419866688 refseq 27;24;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O103:H25 str. CVM9340 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_419866863 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O103:H25 str. CVM9340 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_419867160 hallmark;refseq 12;9;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O103:H25 str. CVM9340 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_419870412-16145-47507 hallmark;refseq 36;23;7;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O103:H2 str. CVM9450 prophage linear Cluster_0 Gammaproteobacteria_gi_419872086 hallmark;refseq 31;24;7; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O103:H2 str. CVM9450 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419872117 hallmark;refseq 37;34;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O103:H2 str. CVM9450 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_419872203 hallmark;refseq 32;29;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O103:H2 str. CVM9450 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419872236 refseq 35;31;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O103:H2 str. CVM9450 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_419872544 refseq 18;10;5;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O103:H2 str. CVM9450 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419872588 refseq 17;12;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O103:H2 str. CVM9450 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_419873777 refseq 18;11;2;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O111:H11 str. CVM9534 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419875241-10557-61847 hallmark;refseq;vdb 69;30;28;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O111:H11 str. CVM9534 prophage linear Cluster_3 Gammaproteobacteria_gi_419879288-6694-17998 refseq 20;17;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O111:H11 str. CVM9534 prophage linear Cluster_81 Gammaproteobacteria_gi_419880197 refseq 20;12;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O111:H11 str. CVM9545 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419880261 refseq 18;14;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O111:H11 str. CVM9545 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419880588 refseq 24;18;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O111:H11 str. CVM9545 extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_419880637 refseq 19;16;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O111:H11 str. CVM9545 extrachromosomal linear Cluster_81 Gammaproteobacteria_gi_419880742 refseq 9;8;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Punalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O111:H11 str. CVM9545 extrachromosomal linear Cluster_19 Gammaproteobacteria_gi_419886226 hallmark;refseq 23;14;;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O111:H11 str. CVM9545 extrachromosomal linear Cluster_79 Gammaproteobacteria_gi_419886624 refseq 19;17;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O111:H8 str. CVM9570 extrachromosomal linear Cluster_252 Gammaproteobacteria_gi_419891115 hallmark;refseq 29;29;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O111:H8 str. CVM9570 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_419892583 hallmark;refseq 22;14;5;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O111:H8 str. CVM9570 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_419897910 hallmark;refseq 30;30;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O111:H8 str. CVM9574 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_419898182 hallmark;refseq 22;14;5;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O111:H8 str. CVM9574 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_419898239 refseq 24;16;8; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O111:H8 str. CVM9574 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_419898434 hallmark;refseq 14;10;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O111:H8 str. CVM9574 extrachromosomal linear Cluster_11 Gammaproteobacteria_gi_419898589 refseq 20;18;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O111:H8 str. CVM9574 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_419898942 hallmark;refseq 17;14;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O26:H11 str. CVM9942 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_419899070 refseq 20;13;2;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O26:H11 str. CVM9942 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419904114 hallmark;refseq 46;20;13;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O26:H11 str. CVM9942 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_419904329 hallmark;refseq 29;21;2;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O26:H11 str. CVM9942 extrachromosomal linear Cluster_7 Gammaproteobacteria_gi_419904683 hallmark;refseq 23;20;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O26:H11 str. CVM9942 extrachromosomal linear Cluster_11 Gammaproteobacteria_gi_419908958-110873-134776 hallmark;refseq 25;21;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O26:H11 str. CVM10026 prophage linear Cluster_11 Gammaproteobacteria_gi_419910424 hallmark;refseq 43;20;11;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O26:H11 str. CVM10026 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_419911411 hallmark;refseq 14;11;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O26:H11 str. CVM10026 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_419911967-11779-44362 hallmark;refseq 41;37;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KD1 prophage linear Cluster_0 Gammaproteobacteria_gi_419913738-84-14523 hallmark;refseq 17;14;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KD1 prophage linear Cluster_2 Gammaproteobacteria_gi_419915097 hallmark;refseq 12;10;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KD1 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419915120 refseq 17;12;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KD1 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419916594 hallmark;refseq 20;12;6;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KD2 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419917972-15063-50220 hallmark;refseq 43;32;6;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KD2 prophage linear Cluster_0 Gammaproteobacteria_gi_419918523 hallmark;refseq 22;15;2;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KD2 extrachromosomal linear Cluster_26 Gammaproteobacteria_gi_419920861-653-15042 hallmark;refseq 17;14;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KD2 prophage linear Cluster_2 Gammaproteobacteria_gi_419922793 refseq 12;11;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Punalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 541-15 extrachromosomal linear Cluster_19 Gammaproteobacteria_gi_419922827 hallmark;refseq 13;8;;5 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 541-15 extrachromosomal linear Cluster_36 Gammaproteobacteria_gi_419923501 hallmark;refseq 16;7;1;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 541-15 extrachromosomal linear Cluster_82 Gammaproteobacteria_gi_419923526 hallmark;refseq 24;24;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 541-15 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419924176 hallmark 18;4;2;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 541-15 extrachromosomal linear Cluster_294 Gammaproteobacteria_gi_419927857 hallmark;refseq 33;24;4;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 541-1 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419928599-33749-64594 hallmark;refseq 40;31;4;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 541-1 prophage linear Cluster_0 Gammaproteobacteria_gi_419932048-0-11185 hallmark;refseq;vdb 16;12;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 576-1 prophage linear Cluster_2 Gammaproteobacteria_gi_419933139-153-37134 hallmark;refseq 49;44;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 576-1 prophage linear Cluster_7 Gammaproteobacteria_gi_419936309 hallmark;refseq 27;24;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 576-1 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_419940094 hallmark;refseq 18;16;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 75 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_419940347 hallmark;refseq 15;12;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 75 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_419943548 refseq 21;12;6;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HM605 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_419944757-11263-34721 hallmark;refseq 32;28;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HM605 prophage linear Cluster_0 Gammaproteobacteria_gi_419944858-0-15624 refseq 26;17;7;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HM605 prophage linear Cluster_1 Gammaproteobacteria_gi_419946966 hallmark;refseq 9;6;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HM605 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_419946984 hallmark;refseq 20;16;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HM605 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_419947251-7110-29742 hallmark;refseq 32;16;5;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HM605 prophage linear Cluster_0 Gammaproteobacteria_gi_419947295-0-10868 hallmark;refseq 12;9;3; Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HM605 prophage linear Cluster_0 Gammaproteobacteria_gi_419950623-22714-46284 hallmark;refseq 29;22;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli CUMT8 prophage linear Cluster_11 Gammaproteobacteria_gi_419950677 refseq 27;26;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli CUMT8 extrachromosomal linear Cluster_23 Gammaproteobacteria_gi_419952011-33751-65709 hallmark;refseq 39;32;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli CUMT8 prophage linear Cluster_0 Gammaproteobacteria_gi_419952097-38101-61626 hallmark;refseq 28;23;5; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli CUMT8 prophage linear Cluster_0 Gammaproteobacteria_gi_419958269-193971-225517 hallmark;refseq 49;36;4;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Enterobacter Enterobacter cloacae subsp. cloacae GS1 prophage linear Cluster_25 Gammaproteobacteria_gi_419973158-1165-43547 hallmark;refseq 60;45;5;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH1 prophage linear Cluster_25 Gammaproteobacteria_gi_419976221-40441-59295 hallmark;refseq 32;25;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH1 prophage linear Cluster_37 Gammaproteobacteria_gi_419976913 hallmark;refseq 20;19;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH1 extrachromosomal linear Cluster_7 Gammaproteobacteria_gi_419976935 hallmark;refseq 23;18;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH1 extrachromosomal linear Cluster_92 Gammaproteobacteria_gi_419977031 hallmark;refseq 30;23;;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH1 extrachromosomal linear Cluster_102 Gammaproteobacteria_gi_419978343-1257-43639 hallmark;refseq 60;45;5;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH2 prophage linear Cluster_25 Gammaproteobacteria_gi_419981915-40335-59189 hallmark;refseq 32;25;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH2 prophage linear Cluster_37 Gammaproteobacteria_gi_419982650 hallmark;refseq 20;19;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH2 extrachromosomal linear Cluster_7 Gammaproteobacteria_gi_419982672 hallmark;refseq 23;18;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH2 extrachromosomal linear Cluster_92 Gammaproteobacteria_gi_419982761 hallmark;refseq 28;23;;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH2 extrachromosomal linear Cluster_102 Gammaproteobacteria_gi_419983728-1227-43609 hallmark;refseq 59;44;5;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH4 prophage linear Cluster_25 Gammaproteobacteria_gi_419988293 hallmark;refseq 20;19;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH4 extrachromosomal linear Cluster_7 Gammaproteobacteria_gi_419988315 hallmark;refseq 23;18;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH4 extrachromosomal linear Cluster_92 Gammaproteobacteria_gi_419988412 hallmark;refseq 30;23;;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH4 extrachromosomal linear Cluster_102 Gammaproteobacteria_gi_419988504 refseq 22;18;;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH4 extrachromosomal linear Cluster_37 Gammaproteobacteria_gi_419989780-1155-43537 hallmark;refseq 60;45;5;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH5 prophage linear Cluster_25 Gammaproteobacteria_gi_419993014-40297-59151 hallmark;refseq 32;25;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH5 prophage linear Cluster_37 Gammaproteobacteria_gi_419994117 hallmark;refseq 20;19;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH5 extrachromosomal linear Cluster_7 Gammaproteobacteria_gi_419994139 hallmark;refseq 23;18;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH5 extrachromosomal linear Cluster_92 Gammaproteobacteria_gi_419994263 hallmark;refseq 28;23;;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH5 extrachromosomal linear Cluster_102 Gammaproteobacteria_gi_419995659-1251-43633 hallmark;refseq 58;43;5;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH6 prophage linear Cluster_25 Gammaproteobacteria_gi_419999242-6593-25447 hallmark;refseq 32;25;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH6 prophage linear Cluster_37 Gammaproteobacteria_gi_419999910 hallmark;refseq 20;19;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH6 extrachromosomal linear Cluster_7 Gammaproteobacteria_gi_419999932 hallmark;refseq 23;18;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH6 extrachromosomal linear Cluster_92 Gammaproteobacteria_gi_420000072 hallmark;refseq 30;23;;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH6 extrachromosomal linear Cluster_102 Gammaproteobacteria_gi_420000569-1142-43522 hallmark;refseq 61;45;5;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH7 prophage linear Cluster_25 Gammaproteobacteria_gi_420005011-40314-59167 hallmark;refseq 32;25;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH7 prophage linear Cluster_37 Gammaproteobacteria_gi_420005770 hallmark;refseq 18;17;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH7 extrachromosomal linear Cluster_7 Gammaproteobacteria_gi_420005789 hallmark;refseq 21;16;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH7 extrachromosomal linear Cluster_92 Gammaproteobacteria_gi_420005829 hallmark;refseq 30;23;;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH7 extrachromosomal linear Cluster_102 Gammaproteobacteria_gi_420007522-217577-259957 hallmark;refseq 59;43;5;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH8 prophage linear Cluster_25 Gammaproteobacteria_gi_420010604-40275-59128 hallmark;refseq 32;25;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH8 prophage linear Cluster_37 Gammaproteobacteria_gi_420011447 hallmark;refseq 20;19;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH8 extrachromosomal linear Cluster_7 Gammaproteobacteria_gi_420011469 hallmark;refseq 23;18;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH8 extrachromosomal linear Cluster_92 Gammaproteobacteria_gi_420011577 hallmark;refseq 29;23;;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH8 extrachromosomal linear Cluster_102 Gammaproteobacteria_gi_420011682 refseq 15;10;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH8 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_420013131-1262-43644 hallmark;refseq 60;44;5;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH9 prophage linear Cluster_25 Gammaproteobacteria_gi_420016895-6525-25379 hallmark;refseq 32;25;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH9 prophage linear Cluster_37 Gammaproteobacteria_gi_420017436 hallmark;refseq 20;19;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH9 extrachromosomal linear Cluster_7 Gammaproteobacteria_gi_420017458 hallmark;refseq 23;18;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH9 extrachromosomal linear Cluster_92 Gammaproteobacteria_gi_420017516 hallmark;refseq 29;23;;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH9 extrachromosomal linear Cluster_102 Gammaproteobacteria_gi_420018216-1278-43657 hallmark;refseq 58;43;5;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH10 prophage linear Cluster_25 Gammaproteobacteria_gi_420022245-6503-25356 hallmark;refseq 32;25;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH10 prophage linear Cluster_37 Gammaproteobacteria_gi_420022978 hallmark;refseq 20;19;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH10 extrachromosomal linear Cluster_7 Gammaproteobacteria_gi_420023000 hallmark;refseq 24;19;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH10 extrachromosomal linear Cluster_92 Gammaproteobacteria_gi_420023105 hallmark;refseq 30;24;;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH10 extrachromosomal linear Cluster_102 Gammaproteobacteria_gi_420024314-1211-43593 hallmark;refseq 60;45;5;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH11 prophage linear Cluster_25 Gammaproteobacteria_gi_420027973-40328-59181 hallmark;refseq 32;25;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH11 prophage linear Cluster_37 Gammaproteobacteria_gi_420028710 hallmark;refseq 20;19;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH11 extrachromosomal linear Cluster_7 Gammaproteobacteria_gi_420028758 hallmark;refseq 23;18;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH11 extrachromosomal linear Cluster_92 Gammaproteobacteria_gi_420028834 hallmark;refseq 28;23;;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH11 extrachromosomal linear Cluster_102 Gammaproteobacteria_gi_420028954 refseq 15;10;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH11 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_420030072-1256-43638 hallmark;refseq 60;45;5;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH12 prophage linear Cluster_25 Gammaproteobacteria_gi_420033661-40307-59161 hallmark;refseq 32;25;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH12 prophage linear Cluster_37 Gammaproteobacteria_gi_420034564 hallmark;refseq 20;19;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH12 extrachromosomal linear Cluster_7 Gammaproteobacteria_gi_420034586 hallmark;refseq 23;18;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH12 extrachromosomal linear Cluster_92 Gammaproteobacteria_gi_420034666 hallmark;refseq 30;23;;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH12 extrachromosomal linear Cluster_102 Gammaproteobacteria_gi_420035178-1221-43601 hallmark;refseq 61;45;5;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH14 prophage linear Cluster_25 Gammaproteobacteria_gi_420039348-40444-59298 hallmark;refseq 31;24;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH14 prophage linear Cluster_37 Gammaproteobacteria_gi_420040257 hallmark;refseq 18;17;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH14 extrachromosomal linear Cluster_7 Gammaproteobacteria_gi_420040276 hallmark;refseq 21;16;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH14 extrachromosomal linear Cluster_92 Gammaproteobacteria_gi_420040347 hallmark;refseq 30;23;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH14 extrachromosomal linear Cluster_102 Gammaproteobacteria_gi_420041508-1155-43536 hallmark;refseq 60;44;5;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH16 prophage linear Cluster_25 Gammaproteobacteria_gi_420045223-40268-59122 hallmark;refseq 32;25;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH16 prophage linear Cluster_37 Gammaproteobacteria_gi_420045956 hallmark;refseq 20;19;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH16 extrachromosomal linear Cluster_7 Gammaproteobacteria_gi_420045978 hallmark;refseq 23;18;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH16 extrachromosomal linear Cluster_92 Gammaproteobacteria_gi_420046060 hallmark;refseq 29;23;;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH16 extrachromosomal linear Cluster_102 Gammaproteobacteria_gi_420047569-1161-43543 hallmark;refseq 60;45;5;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH17 prophage linear Cluster_25 Gammaproteobacteria_gi_420051153-40295-59148 hallmark;refseq 31;24;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH17 prophage linear Cluster_37 Gammaproteobacteria_gi_420051704 hallmark;refseq 35;26;3;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH17 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_420051807 hallmark;refseq 20;19;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH17 extrachromosomal linear Cluster_7 Gammaproteobacteria_gi_420051829 hallmark;refseq 23;18;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH17 extrachromosomal linear Cluster_92 Gammaproteobacteria_gi_420051870 hallmark;refseq 30;23;;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH17 extrachromosomal linear Cluster_102 Gammaproteobacteria_gi_420053273-1200-43581 hallmark;refseq 59;43;5;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH18 prophage linear Cluster_25 Gammaproteobacteria_gi_420056786-6478-25332 hallmark;refseq 32;25;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH18 prophage linear Cluster_37 Gammaproteobacteria_gi_420057438 hallmark;refseq 20;19;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH18 extrachromosomal linear Cluster_7 Gammaproteobacteria_gi_420057460 hallmark;refseq 23;18;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH18 extrachromosomal linear Cluster_92 Gammaproteobacteria_gi_420057541 hallmark;refseq 30;23;;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH18 extrachromosomal linear Cluster_102 Gammaproteobacteria_gi_420058116-1051-43430 hallmark;refseq 60;45;5;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH19 prophage linear Cluster_25 Gammaproteobacteria_gi_420061926-40183-59035 hallmark;refseq 31;24;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH19 prophage linear Cluster_37 Gammaproteobacteria_gi_420062944 hallmark;refseq 20;19;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH19 extrachromosomal linear Cluster_7 Gammaproteobacteria_gi_420063012 hallmark;refseq 23;18;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH19 extrachromosomal linear Cluster_92 Gammaproteobacteria_gi_420063193 hallmark;refseq 28;23;;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH19 extrachromosomal linear Cluster_102 Gammaproteobacteria_gi_420064403-1230-43608 hallmark;refseq 60;45;5;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH20 prophage linear Cluster_25 Gammaproteobacteria_gi_420068168-6574-25428 hallmark;refseq 32;25;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH20 prophage linear Cluster_37 Gammaproteobacteria_gi_420068910 hallmark;refseq 18;17;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH20 extrachromosomal linear Cluster_7 Gammaproteobacteria_gi_420068929 hallmark;refseq 21;16;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH20 extrachromosomal linear Cluster_92 Gammaproteobacteria_gi_420068969 hallmark;refseq 31;23;1;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH20 extrachromosomal linear Cluster_102 Gammaproteobacteria_gi_420070280-171969-214351 hallmark;refseq 59;44;5;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH21 prophage linear Cluster_25 Gammaproteobacteria_gi_420073610-6640-25494 hallmark;refseq 32;25;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH21 prophage linear Cluster_37 Gammaproteobacteria_gi_420074569 hallmark;refseq 20;19;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH21 extrachromosomal linear Cluster_7 Gammaproteobacteria_gi_420074591 hallmark;refseq 22;17;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH21 extrachromosomal linear Cluster_92 Gammaproteobacteria_gi_420079347-40469-59322 hallmark;refseq 33;26;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH22 prophage linear Cluster_37 Gammaproteobacteria_gi_420079881-1511-45160 hallmark;refseq 63;47;6;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH22 prophage linear Cluster_25 Gammaproteobacteria_gi_420080498 hallmark;refseq 20;19;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH22 extrachromosomal linear Cluster_7 Gammaproteobacteria_gi_420080520 hallmark;refseq 23;18;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH22 extrachromosomal linear Cluster_92 Gammaproteobacteria_gi_420080618 hallmark;refseq 30;23;;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH22 extrachromosomal linear Cluster_102 Gammaproteobacteria_gi_420083302-6468-25320 hallmark;refseq 32;25;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH23 prophage linear Cluster_37 Gammaproteobacteria_gi_420083990-1592-45172 hallmark;refseq 61;45;6;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH23 prophage linear Cluster_25 Gammaproteobacteria_gi_420085575 hallmark;refseq 23;18;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH23 extrachromosomal linear Cluster_92 Gammaproteobacteria_gi_420085889 hallmark;refseq 31;23;1;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH23 extrachromosomal linear Cluster_102 Gammaproteobacteria_gi_420085953 hallmark;refseq 15;14;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH23 extrachromosomal linear Cluster_7 Gammaproteobacteria_gi_420091647 hallmark;refseq 18;18;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O111:H8 str. CVM9602 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_420098357 hallmark;refseq 16;14;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O111:H8 str. CVM9634 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_420099237 refseq 13;12;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O111:H11 str. CVM9455 extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_420099668 hallmark;refseq 12;8;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O111:H11 str. CVM9455 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_420099815 hallmark;refseq 17;11;6; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O111:H11 str. CVM9455 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_420101828-566-38960 hallmark;refseq 51;25;15;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O111:H11 str. CVM9455 prophage linear Cluster_3 Gammaproteobacteria_gi_420105279-2148-21459 hallmark;refseq 26;13;7;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O111:H11 str. CVM9455 prophage linear Cluster_0 Gammaproteobacteria_gi_420106126-6700-13928 refseq 15;13;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O111:H11 str. CVM9553 prophage linear Cluster_81 Gammaproteobacteria_gi_420106539 refseq 18;11;2;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O111:H11 str. CVM9553 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_420106717 hallmark;refseq 18;14;;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O111:H11 str. CVM9553 extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_420110449 hallmark;refseq 47;21;15;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O111:H11 str. CVM9553 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_420116645-0-24941 hallmark;refseq 28;23;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O26:H11 str. CVM10021 prophage linear Cluster_11 Gammaproteobacteria_gi_420117800-4445-23346 refseq 29;22;3;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O26:H11 str. CVM10021 prophage linear Cluster_1 Gammaproteobacteria_gi_420118035 hallmark;refseq 22;15;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O26:H11 str. CVM10021 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_420123878 hallmark;refseq 23;22;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O26:H11 str. CVM10030 extrachromosomal linear Cluster_7 Gammaproteobacteria_gi_420123927-4218-21400 refseq 26;22;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O26:H11 str. CVM10030 prophage linear Cluster_1 Gammaproteobacteria_gi_420124224 refseq 16;12;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O26:H11 str. CVM10030 extrachromosomal linear Cluster_477 Gammaproteobacteria_gi_420124240 refseq 21;12;4;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O26:H11 str. CVM10030 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_420124418 hallmark;refseq 13;10;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O26:H11 str. CVM10030 extrachromosomal linear Cluster_11 Gammaproteobacteria_gi_420124451 hallmark;refseq 15;14;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O26:H11 str. CVM10030 extrachromosomal linear Cluster_11 Gammaproteobacteria_gi_420127347-32838-58491 hallmark;refseq 29;24;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O26:H11 str. CVM10224 prophage linear Cluster_11 Gammaproteobacteria_gi_420129585-3991-21634 refseq 27;22;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O26:H11 str. CVM10224 prophage linear Cluster_1 Gammaproteobacteria_gi_420129860 refseq 20;13;2;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O26:H11 str. CVM10224 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_420131816-34-25497 hallmark;refseq 28;23;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O26:H11 str. CVM9952 prophage linear Cluster_11 Gammaproteobacteria_gi_420135275-629-15063 hallmark;refseq 18;15;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O26:H11 str. CVM9952 prophage linear Cluster_2 Gammaproteobacteria_gi_420136328 refseq 21;12;4;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O26:H11 str. CVM9952 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_420137445 hallmark;refseq 64;32;7;25 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa CIG1 extrachromosomal linear Cluster_83 Gammaproteobacteria_gi_420258763-2349-25767 hallmark;refseq 33;22;2;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia enterocolitica subsp. enterocolitica WA-314 prophage linear Cluster_0 Gammaproteobacteria_gi_420259586 refseq 15;7;2;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia enterocolitica subsp. enterocolitica WA-314 extrachromosomal linear Cluster_230 Gammaproteobacteria_gi_420260220-0-42431 hallmark;refseq 60;30;15;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia enterocolitica subsp. enterocolitica WA-314 prophage linear Cluster_3 Gammaproteobacteria_gi_420268339 hallmark;refseq 19;14;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA22 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_420268722-31563-50609 hallmark;refseq 31;24;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA22 prophage linear Cluster_1 Gammaproteobacteria_gi_420269007 hallmark;refseq 21;18;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA22 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_420269354 refseq 27;16;11; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA22 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_420269716-32-27037 hallmark;refseq 38;23;11;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA22 prophage linear Cluster_10 Gammaproteobacteria_gi_420270157 hallmark;refseq 18;11;7; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA22 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_420270200-588-26081 hallmark;refseq 32;25;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA22 prophage linear Cluster_2 Gammaproteobacteria_gi_420274108 hallmark;refseq 17;14;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA40 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_420274637 hallmark;refseq 14;11;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA40 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_420274664-42503-58140 hallmark;refseq 22;19;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA40 prophage linear Cluster_1 Gammaproteobacteria_gi_420274860 hallmark;refseq 17;14;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA40 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_420274879 refseq 19;10;7;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA40 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_420275219 refseq 33;20;12;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA40 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_420275844 refseq 33;31;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA40 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_420275878 hallmark;refseq 27;21;6; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA40 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_420276102 refseq 19;15;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA40 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_420280393 refseq 31;18;13; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW06591 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_420280431 hallmark;refseq 29;15;8;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW06591 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_420280961 hallmark;refseq 18;12;6; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW06591 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_420281000 hallmark;refseq;vdb 24;19;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW06591 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_420281530 hallmark;refseq 42;32;9;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW06591 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_420285214 hallmark;refseq 25;19;6; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW10246 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_420285506 hallmark;refseq 16;13;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW10246 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_420287201 refseq 35;33;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW10246 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_420287654 hallmark;refseq 20;20;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW10246 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_420287689 refseq 23;22;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW10246 extrachromosomal linear Cluster_19 Gammaproteobacteria_gi_420291234 hallmark;refseq 22;19;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW11039 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_420291368-9209-47629 hallmark;refseq 51;24;16;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW11039 prophage linear Cluster_3 Gammaproteobacteria_gi_420291666 hallmark;refseq 33;27;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW11039 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_420292855 refseq 27;26;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW11039 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_420293357 refseq 31;28;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW11039 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_420293391 hallmark;refseq 15;13;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW11039 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_420297349-35912-56786 hallmark;refseq 31;24;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW09109 prophage linear Cluster_1 Gammaproteobacteria_gi_420297425 hallmark;refseq 18;16;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW09109 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_420297591 refseq 23;17;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW09109 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_420298022 refseq 44;27;16;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW09109 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_420298407-0-67809 hallmark;refseq 39;28;6;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW09109 prophage linear Cluster_0 Gammaproteobacteria_gi_420298718-1845-40395 hallmark;refseq 56;51;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW09109 prophage linear Cluster_4 Gammaproteobacteria_gi_420298906 refseq 28;20;5;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW09109 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_420298938-407419-445588 hallmark;refseq 50;48;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW09109 prophage linear Cluster_7 Gammaproteobacteria_gi_420302680 hallmark;refseq 28;22;6; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW10119 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_420303886 refseq 48;31;17; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW10119 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_420304539 hallmark;refseq 45;42;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW10119 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_420304586-92390-123907 hallmark;refseq 42;34;5;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW10119 prophage linear Cluster_0 Gammaproteobacteria_gi_420304791-263083-293781 hallmark;refseq 32;31;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW10119 prophage linear Cluster_5 Gammaproteobacteria_gi_420308506 hallmark;refseq 21;18;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1738 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_420308875 hallmark;refseq 14;9;5; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1738 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_420308934 hallmark;refseq 16;14;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1738 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_420309097 hallmark;refseq 19;16;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1738 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_420309135 refseq 16;12;1;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1738 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_420309498 refseq 30;18;11;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1738 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_420309540 hallmark;refseq 14;10;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1738 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_420309556 hallmark;refseq 12;10;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1738 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_420310033 refseq 19;12;3;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1738 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_420310110 hallmark;refseq 17;12;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1738 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_420310128-0-32457 hallmark;refseq 47;44;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1738 prophage linear Cluster_4 Gammaproteobacteria_gi_420310331 hallmark;refseq 40;31;7;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1738 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_420313997 refseq 26;12;9;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1734 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_420314358 refseq 20;14;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1734 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_420314381 refseq 12;7;5; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1734 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_420314484 hallmark;refseq 28;14;6;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1734 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_420314965 refseq 27;17;10; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1734 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_420315515-71-22868 hallmark;refseq 31;25;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1734 prophage linear Cluster_0 Gammaproteobacteria_gi_420315603 hallmark;refseq 16;14;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1734 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_420315676-92550-105446 hallmark;refseq;vdb 13;9;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1734 prophage linear Cluster_0 Gammaproteobacteria_gi_420315816-270394-301803 hallmark;refseq 32;32;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1734 prophage linear Cluster_5 Gammaproteobacteria_gi_420318404-0-31213 hallmark;refseq 37;28;7;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella flexneri 2850-71 prophage linear Cluster_1 Gammaproteobacteria_gi_420318738-126-23401 hallmark;refseq 38;35;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella flexneri 2850-71 prophage linear Cluster_3 Gammaproteobacteria_gi_420319188 hallmark 19;7;8;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella flexneri 2850-71 extrachromosomal linear Cluster_19 Gammaproteobacteria_gi_420319205 refseq 50;33;14;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella flexneri 2850-71 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_420324366-47548-68783 refseq;vdb 25;16;9; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella flexneri CCH060 prophage linear Cluster_1 Gammaproteobacteria_gi_420324576-0-31904 hallmark;refseq 43;32;7;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella flexneri CCH060 prophage linear Cluster_0 Gammaproteobacteria_gi_420325702 hallmark;refseq 31;15;15;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella flexneri CCH060 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_420325890 hallmark;refseq 19;8;6;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella flexneri CCH060 extrachromosomal linear Cluster_19 Gammaproteobacteria_gi_420329369 hallmark;refseq 68;60;4;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella flexneri K-1770 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_420329502 hallmark;refseq 17;12;;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella flexneri K-1770 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_420329731-4531-30033 hallmark;refseq 36;28;7;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella flexneri K-1770 prophage linear Cluster_19 Gammaproteobacteria_gi_420330013 refseq 19;13;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella flexneri K-1770 extrachromosomal linear Cluster_47 Gammaproteobacteria_gi_420331492 refseq 13;8;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella flexneri K-1770 extrachromosomal linear Cluster_19 Gammaproteobacteria_gi_420331636 hallmark;refseq 16;12;1;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella flexneri K-1770 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_420331654 refseq 24;15;5;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella flexneri K-1770 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_420334901 hallmark;refseq 33;21;12; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella flexneri K-315 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_420335294 refseq 22;10;8;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella flexneri K-315 extrachromosomal linear Cluster_19 Gammaproteobacteria_gi_420336717 refseq 12;7;4;1 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella flexneri K-315 extrachromosomal linear Cluster_19 Gammaproteobacteria_gi_420339703 hallmark;refseq 36;26;10; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella flexneri K-404 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_420339909 refseq 18;15;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella flexneri K-404 extrachromosomal linear Cluster_19 Gammaproteobacteria_gi_420340880 hallmark;refseq 17;12;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella flexneri K-404 extrachromosomal linear Cluster_19 Gammaproteobacteria_gi_420342226 refseq 17;8;6;3 Viruses;unclassified;unclassified;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella flexneri K-404 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_420344912 hallmark;refseq 20;16;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella boydii 965-58 extrachromosomal linear Cluster_54 Gammaproteobacteria_gi_420344936 hallmark;refseq 44;38;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella boydii 965-58 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_420345022 hallmark;refseq 18;13;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella boydii 965-58 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_420345987 hallmark 49;17;25;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella boydii 965-58 extrachromosomal linear Cluster_28 Gammaproteobacteria_gi_420346344 refseq 16;10;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella boydii 965-58 extrachromosomal linear Cluster_19 Gammaproteobacteria_gi_420346604 refseq 23;19;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella boydii 965-58 extrachromosomal linear Cluster_19 Gammaproteobacteria_gi_420347648-57423-95110 hallmark;refseq 47;33;6;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella boydii 965-58 prophage linear Cluster_0 Gammaproteobacteria_gi_420352363-13709-33538 hallmark;vdb 24;14;9;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella boydii 4444-74 prophage linear Cluster_1 Gammaproteobacteria_gi_420356229-217518-264557 hallmark;refseq 54;37;15;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella sonnei 3226-85 prophage linear Cluster_2 Gammaproteobacteria_gi_420357439-0-25696 hallmark;refseq 32;14;15;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella sonnei 3226-85 prophage linear Cluster_19 Gammaproteobacteria_gi_420358867 refseq 39;27;9;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella sonnei 3226-85 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_420359535 refseq 31;20;7;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella sonnei 3226-85 extrachromosomal linear Cluster_19 Gammaproteobacteria_gi_420359854-0-14284 hallmark;refseq 19;18;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella sonnei 3226-85 prophage linear Cluster_19 Gammaproteobacteria_gi_420362096 refseq 22;16;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella sonnei 4822-66 extrachromosomal linear Cluster_19 Gammaproteobacteria_gi_420364443-13117-27069 hallmark;refseq 17;16;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella sonnei 4822-66 prophage linear Cluster_19 Gammaproteobacteria_gi_420364502-13130-31336 hallmark;refseq 23;16;7; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella sonnei 4822-66 prophage linear Cluster_19 Gammaproteobacteria_gi_420379357 refseq 23;13;7;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella dysenteriae 225-75 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_420379525-0-14167 refseq;vdb 20;17;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella dysenteriae 225-75 prophage linear Cluster_10 Gammaproteobacteria_gi_420379631 refseq 23;13;7;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella dysenteriae 225-75 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_420379867-25-11845 hallmark;refseq 16;16;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella dysenteriae 225-75 prophage linear Cluster_4 Gammaproteobacteria_gi_420380836-213998-240407 hallmark;refseq 34;29;5; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella dysenteriae 225-75 prophage linear Cluster_0 Gammaproteobacteria_gi_420381424 refseq 17;10;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella dysenteriae 225-75 extrachromosomal linear Cluster_54 Gammaproteobacteria_gi_420381615 refseq;vdb 22;15;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella dysenteriae 225-75 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_420383597 hallmark;refseq 17;10;7; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella dysenteriae 225-75 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_420384934 hallmark;refseq 49;30;11;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EPECa12 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_420385509-0-12999 hallmark;refseq 17;13;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EPECa12 prophage linear Cluster_2 Gammaproteobacteria_gi_420388689 hallmark;refseq 49;42;3;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EPECa12 extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_420388982 refseq 32;24;6;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EPECa12 extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_420389841-36754-62776 hallmark;refseq 39;33;6; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EPEC C342-62 prophage linear Cluster_1 Gammaproteobacteria_gi_420390087 hallmark;refseq 20;14;1;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Punalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EPEC C342-62 extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_420390109-70443-120977 hallmark;refseq 62;42;16;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EPEC C342-62 prophage linear Cluster_1 Gammaproteobacteria_gi_420390330-156297-205382 hallmark;refseq 66;53;9;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EPEC C342-62 prophage linear Cluster_4 Gammaproteobacteria_gi_420390894 refseq 73;67;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EPEC C342-62 extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_420390974 hallmark;refseq 17;15;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EPEC C342-62 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_420544037 hallmark;refseq 24;23;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-01 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_420546985 hallmark;refseq 16;13;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-01 extrachromosomal linear Cluster_18 Gammaproteobacteria_gi_420547001 refseq 14;9;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-01 extrachromosomal linear Cluster_27 Gammaproteobacteria_gi_420549569 refseq 15;14;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-02 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_420552313 hallmark;refseq 13;10;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-02 extrachromosomal linear Cluster_18 Gammaproteobacteria_gi_420552326 refseq 14;9;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-02 extrachromosomal linear Cluster_27 Gammaproteobacteria_gi_420554834 hallmark;refseq 25;24;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-03 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_420557828 hallmark;refseq 16;13;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-03 extrachromosomal linear Cluster_18 Gammaproteobacteria_gi_420560539 hallmark;refseq 20;20;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-04 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_420563350 hallmark;refseq 16;13;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-04 extrachromosomal linear Cluster_18 Gammaproteobacteria_gi_420563366 refseq 14;9;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-04 extrachromosomal linear Cluster_27 Gammaproteobacteria_gi_420568373 hallmark;refseq 16;13;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-05 extrachromosomal linear Cluster_18 Gammaproteobacteria_gi_420568389 refseq 14;9;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-05 extrachromosomal linear Cluster_27 Gammaproteobacteria_gi_420570807 hallmark;refseq 36;35;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-05 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_420571148 refseq 15;14;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-06 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_420574037 hallmark;refseq 16;13;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-06 extrachromosomal linear Cluster_18 Gammaproteobacteria_gi_420574053 refseq 14;9;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-06 extrachromosomal linear Cluster_27 Gammaproteobacteria_gi_420576692 hallmark;refseq 34;33;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-07 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_420579349 hallmark;refseq 16;13;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-07 extrachromosomal linear Cluster_18 Gammaproteobacteria_gi_420579365 refseq 14;9;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-07 extrachromosomal linear Cluster_27 Gammaproteobacteria_gi_420581849 refseq 21;19;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-08 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_420581952 hallmark;refseq 29;29;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-08 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_420584683 hallmark;refseq 16;13;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-08 extrachromosomal linear Cluster_18 Gammaproteobacteria_gi_420584699 refseq 14;9;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-08 extrachromosomal linear Cluster_27 Gammaproteobacteria_gi_420589814 hallmark;refseq 16;13;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-09 extrachromosomal linear Cluster_18 Gammaproteobacteria_gi_420589830 refseq 14;9;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-09 extrachromosomal linear Cluster_27 Gammaproteobacteria_gi_420592232 hallmark;refseq 19;19;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-09 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_420594126 hallmark 17;5;8;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-10 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_420595202 hallmark;refseq 16;13;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-10 extrachromosomal linear Cluster_18 Gammaproteobacteria_gi_420595218 refseq 14;9;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-10 extrachromosomal linear Cluster_27 Gammaproteobacteria_gi_420597716 hallmark;refseq 29;29;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-10 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_420597981 hallmark;refseq 19;19;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-11 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_420600839 hallmark;refseq 16;13;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-11 extrachromosomal linear Cluster_18 Gammaproteobacteria_gi_420600855 refseq 14;9;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-11 extrachromosomal linear Cluster_27 Gammaproteobacteria_gi_420603452 refseq 8;7;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-12 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_420603461 hallmark;refseq 29;29;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-12 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_420606313 refseq 14;9;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-12 extrachromosomal linear Cluster_27 Gammaproteobacteria_gi_420611675 hallmark;refseq 16;13;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-13 extrachromosomal linear Cluster_18 Gammaproteobacteria_gi_420611691 refseq 14;9;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-13 extrachromosomal linear Cluster_27 Gammaproteobacteria_gi_420614108 refseq 23;20;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-14 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_420614253 hallmark;refseq 37;36;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-14 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_420617043 hallmark;refseq 16;13;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-14 extrachromosomal linear Cluster_18 Gammaproteobacteria_gi_420617059 refseq 14;9;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-14 extrachromosomal linear Cluster_27 Gammaproteobacteria_gi_420619509 hallmark;refseq 20;20;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-15 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_420621326 hallmark 19;8;9;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-15 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_420622364 hallmark;refseq 16;13;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-15 extrachromosomal linear Cluster_18 Gammaproteobacteria_gi_420622380 refseq 14;9;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-15 extrachromosomal linear Cluster_27 Gammaproteobacteria_gi_420627456 hallmark;refseq 16;13;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-16 extrachromosomal linear Cluster_18 Gammaproteobacteria_gi_420627472 refseq 14;9;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-16 extrachromosomal linear Cluster_27 Gammaproteobacteria_gi_420629745 hallmark;refseq 25;24;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-16 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_420630029 hallmark;refseq 34;33;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-19 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_420632553 hallmark;refseq 16;13;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-19 extrachromosomal linear Cluster_18 Gammaproteobacteria_gi_420632569 refseq 14;9;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-19 extrachromosomal linear Cluster_27 Gammaproteobacteria_gi_420632727-23139-31581 noncaudo 12;3;1;8 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-19 prophage linear Cluster_51 Gammaproteobacteria_gi_420637766 hallmark;refseq 16;13;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-25 extrachromosomal linear Cluster_18 Gammaproteobacteria_gi_420637782 refseq 14;9;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-25 extrachromosomal linear Cluster_27 Gammaproteobacteria_gi_420640338 hallmark;refseq 20;20;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-25 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_420640678 hallmark;refseq 36;35;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-29 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_420640765 refseq 21;19;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-29 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_420643296 hallmark;refseq 16;13;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-29 extrachromosomal linear Cluster_18 Gammaproteobacteria_gi_420643312 refseq 14;9;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-29 extrachromosomal linear Cluster_27 Gammaproteobacteria_gi_420645641 hallmark;refseq 29;29;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-32 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_420648514 hallmark;refseq 16;13;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-32 extrachromosomal linear Cluster_18 Gammaproteobacteria_gi_420651305 refseq 17;16;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-34 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_420654157 hallmark;refseq 16;13;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-34 extrachromosomal linear Cluster_18 Gammaproteobacteria_gi_420654173 refseq 14;9;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-34 extrachromosomal linear Cluster_27 Gammaproteobacteria_gi_420659638 hallmark;refseq 16;13;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-36 extrachromosomal linear Cluster_18 Gammaproteobacteria_gi_420659654 refseq 14;9;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-36 extrachromosomal linear Cluster_27 Gammaproteobacteria_gi_420662238 hallmark;refseq 34;33;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-42 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_420664959 hallmark;refseq 16;13;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-42 extrachromosomal linear Cluster_18 Gammaproteobacteria_gi_420664975 refseq 14;9;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-42 extrachromosomal linear Cluster_27 Gammaproteobacteria_gi_420669857 hallmark;refseq 16;13;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-45 extrachromosomal linear Cluster_18 Gammaproteobacteria_gi_420669873 refseq 14;9;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-45 extrachromosomal linear Cluster_27 Gammaproteobacteria_gi_420675204 hallmark;refseq 16;13;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-46 extrachromosomal linear Cluster_18 Gammaproteobacteria_gi_420675220 refseq 14;9;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-46 extrachromosomal linear Cluster_27 Gammaproteobacteria_gi_420677566 hallmark;refseq 20;20;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-46 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_420677586 refseq 8;7;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-46 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_420678004 hallmark;refseq 25;24;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-47 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_420679726 hallmark 17;5;8;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-47 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_420680795 hallmark;refseq 16;13;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-47 extrachromosomal linear Cluster_18 Gammaproteobacteria_gi_420680811 refseq 14;9;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-47 extrachromosomal linear Cluster_27 Gammaproteobacteria_gi_420683239 refseq 8;7;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-48 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_420683355 hallmark;refseq 29;29;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-48 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_420684979 hallmark 17;5;8;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-48 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_420686079 hallmark;refseq 16;13;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-48 extrachromosomal linear Cluster_18 Gammaproteobacteria_gi_420686095 refseq 14;9;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-48 extrachromosomal linear Cluster_27 Gammaproteobacteria_gi_420691267 hallmark;refseq 16;13;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-52 extrachromosomal linear Cluster_18 Gammaproteobacteria_gi_420691283 refseq 14;9;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-52 extrachromosomal linear Cluster_27 Gammaproteobacteria_gi_420693876 hallmark;refseq 25;24;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-52 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_420694208 hallmark;refseq 34;33;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-53 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_420697068 hallmark;refseq 16;13;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-53 extrachromosomal linear Cluster_18 Gammaproteobacteria_gi_420697084 refseq 14;9;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-53 extrachromosomal linear Cluster_27 Gammaproteobacteria_gi_420702642 hallmark;refseq 16;13;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-54 extrachromosomal linear Cluster_18 Gammaproteobacteria_gi_420705628 hallmark;refseq 21;20;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-54 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_420707338 hallmark 17;5;8;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-55 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_420708335 hallmark;refseq 16;13;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-55 extrachromosomal linear Cluster_18 Gammaproteobacteria_gi_420708351 refseq 14;9;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-55 extrachromosomal linear Cluster_27 Gammaproteobacteria_gi_420710971 refseq 8;7;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-55 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_420713737 hallmark;refseq 16;13;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-56 extrachromosomal linear Cluster_18 Gammaproteobacteria_gi_420713753 refseq 14;9;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-56 extrachromosomal linear Cluster_27 Gammaproteobacteria_gi_420716437 hallmark;refseq 25;24;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-58 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_420718052 hallmark 18;7;9;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-58 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_420719200 hallmark;refseq 16;13;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-58 extrachromosomal linear Cluster_18 Gammaproteobacteria_gi_420719410 noncaudo 12;3;4;5 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-58 extrachromosomal linear Cluster_51 Gammaproteobacteria_gi_420721874 refseq 21;19;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-58 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_420724726 hallmark;refseq 16;13;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-59 extrachromosomal linear Cluster_18 Gammaproteobacteria_gi_420724742 refseq 14;9;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-59 extrachromosomal linear Cluster_27 Gammaproteobacteria_gi_420727199 refseq 8;7;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-59 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_420727537 refseq 8;7;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-60 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_420727559 hallmark;refseq 19;19;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-60 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_420730344 hallmark;refseq 16;13;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-60 extrachromosomal linear Cluster_18 Gammaproteobacteria_gi_420730360 refseq 14;9;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-60 extrachromosomal linear Cluster_27 Gammaproteobacteria_gi_420735366 hallmark;refseq 16;13;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-61 extrachromosomal linear Cluster_18 Gammaproteobacteria_gi_420735382 refseq 14;9;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-61 extrachromosomal linear Cluster_27 Gammaproteobacteria_gi_420737650 refseq 8;7;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-61 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_420737660 hallmark;refseq 29;29;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-61 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_420738104 hallmark;refseq 29;29;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-63 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_420738136 refseq 8;7;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-63 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_420739805 hallmark 17;5;8;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-63 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_420740841 hallmark;refseq 16;13;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-63 extrachromosomal linear Cluster_18 Gammaproteobacteria_gi_420740857 refseq 14;9;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-63 extrachromosomal linear Cluster_27 Gammaproteobacteria_gi_420743373 hallmark;refseq 27;27;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-64 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_420746393 refseq 14;9;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-64 extrachromosomal linear Cluster_27 Gammaproteobacteria_gi_420746582-19374-29392 noncaudo 13;3;2;8 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-64 prophage linear Cluster_51 Gammaproteobacteria_gi_420749175 refseq 21;19;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-65 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_420749205 hallmark;refseq 19;19;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-65 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_420749228 refseq 15;14;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-65 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_420750932 hallmark 17;5;8;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-65 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_420751981 hallmark;refseq 16;13;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-65 extrachromosomal linear Cluster_18 Gammaproteobacteria_gi_420751997 refseq 14;9;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-65 extrachromosomal linear Cluster_27 Gammaproteobacteria_gi_420763037 hallmark;refseq 16;13;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-71 extrachromosomal linear Cluster_18 Gammaproteobacteria_gi_420763053 refseq 14;9;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-71 extrachromosomal linear Cluster_27 Gammaproteobacteria_gi_420763236 noncaudo 12;3;1;8 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-71 extrachromosomal linear Cluster_51 Gammaproteobacteria_gi_420765462 hallmark;refseq 19;19;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-71 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_420768218 hallmark;refseq 16;13;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-72 extrachromosomal linear Cluster_18 Gammaproteobacteria_gi_420768234 refseq 14;9;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-72 extrachromosomal linear Cluster_27 Gammaproteobacteria_gi_420768422-170-10179 noncaudo 13;3;2;8 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-72 prophage linear Cluster_51 Gammaproteobacteria_gi_420770744 hallmark;refseq 19;19;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-72 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_420770778 refseq 8;7;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-72 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_420773260 hallmark;refseq 16;13;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-76 extrachromosomal linear Cluster_18 Gammaproteobacteria_gi_420773276 refseq 14;9;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-76 extrachromosomal linear Cluster_27 Gammaproteobacteria_gi_420773455 noncaudo 12;3;1;8 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-76 extrachromosomal linear Cluster_51 Gammaproteobacteria_gi_420775735 refseq 15;14;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-76 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_420775973 hallmark;refseq 20;20;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-88 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_420778795 hallmark;refseq 16;13;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-88 extrachromosomal linear Cluster_18 Gammaproteobacteria_gi_420778811 refseq 14;9;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-88 extrachromosomal linear Cluster_27 Gammaproteobacteria_gi_420781389 refseq 8;7;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-89 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_420781621 hallmark;refseq 19;19;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-89 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_420783218 hallmark 27;9;13;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-89 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_420784376 hallmark;refseq 16;13;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-89 extrachromosomal linear Cluster_18 Gammaproteobacteria_gi_420784392 refseq 14;9;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-89 extrachromosomal linear Cluster_27 Gammaproteobacteria_gi_420789618 hallmark;refseq 16;13;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-90 extrachromosomal linear Cluster_18 Gammaproteobacteria_gi_420789634 refseq 14;9;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-90 extrachromosomal linear Cluster_27 Gammaproteobacteria_gi_420792070 hallmark;refseq 27;26;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-90 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_420792197 refseq 21;19;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-91 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_420792514 hallmark;refseq 25;24;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-91 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_420795118 hallmark;refseq 16;13;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-91 extrachromosomal linear Cluster_18 Gammaproteobacteria_gi_420795134 refseq 14;9;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-91 extrachromosomal linear Cluster_27 Gammaproteobacteria_gi_420800169 hallmark;refseq 16;13;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-92 extrachromosomal linear Cluster_18 Gammaproteobacteria_gi_420800185 refseq 14;9;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-92 extrachromosomal linear Cluster_27 Gammaproteobacteria_gi_420802816 refseq 15;14;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-92 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_420805559 hallmark;refseq 16;13;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-93 extrachromosomal linear Cluster_18 Gammaproteobacteria_gi_420805575 refseq 14;9;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-93 extrachromosomal linear Cluster_27 Gammaproteobacteria_gi_420808099 refseq 21;19;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-93 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_420810874 hallmark;refseq 16;13;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-94 extrachromosomal linear Cluster_18 Gammaproteobacteria_gi_420810890 refseq 14;9;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-94 extrachromosomal linear Cluster_27 Gammaproteobacteria_gi_420813625 refseq 17;16;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-95 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_420816439 hallmark;refseq 16;13;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-95 extrachromosomal linear Cluster_18 Gammaproteobacteria_gi_420816455 refseq 14;9;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-95 extrachromosomal linear Cluster_27 Gammaproteobacteria_gi_420818859 hallmark;refseq 20;20;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-96 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_420821722 hallmark;refseq 13;10;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-96 extrachromosomal linear Cluster_18 Gammaproteobacteria_gi_420821735 refseq 14;9;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-96 extrachromosomal linear Cluster_27 Gammaproteobacteria_gi_420826813 hallmark;refseq 16;13;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-98 extrachromosomal linear Cluster_18 Gammaproteobacteria_gi_420826829 refseq 14;9;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-98 extrachromosomal linear Cluster_27 Gammaproteobacteria_gi_420829456 refseq 8;7;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-98 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_420829477 hallmark;refseq 19;19;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-98 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_420832514 hallmark;refseq 16;13;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-99 extrachromosomal linear Cluster_18 Gammaproteobacteria_gi_420832530 refseq 14;9;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-99 extrachromosomal linear Cluster_27 Gammaproteobacteria_gi_420836356 hallmark 23;6;11;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-100 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_420837383 hallmark;refseq 16;13;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-100 extrachromosomal linear Cluster_18 Gammaproteobacteria_gi_420837399 refseq 14;9;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-100 extrachromosomal linear Cluster_27 Gammaproteobacteria_gi_420839727 hallmark;refseq 34;33;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-100 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_420842556 hallmark;refseq 16;13;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-101 extrachromosomal linear Cluster_18 Gammaproteobacteria_gi_420842572 refseq 14;9;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-101 extrachromosomal linear Cluster_27 Gammaproteobacteria_gi_420845101 hallmark;refseq 29;29;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-101 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_420845413 hallmark;refseq 29;29;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-102 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_420847122 hallmark 17;5;8;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-102 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_420848197 hallmark;refseq 16;13;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-102 extrachromosomal linear Cluster_18 Gammaproteobacteria_gi_420848213 refseq 14;9;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-102 extrachromosomal linear Cluster_27 Gammaproteobacteria_gi_420850612 refseq 14;13;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-103 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_420853717 hallmark;refseq;vdb 15;12;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-103 extrachromosomal linear Cluster_18 Gammaproteobacteria_gi_420853734 refseq 14;9;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-103 extrachromosomal linear Cluster_27 Gammaproteobacteria_gi_420859068 hallmark;refseq 16;13;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-113 extrachromosomal linear Cluster_18 Gammaproteobacteria_gi_420859084 refseq 14;9;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-113 extrachromosomal linear Cluster_27 Gammaproteobacteria_gi_420861423 refseq 10;9;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-113 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_420861646 hallmark;refseq 15;15;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis PY-113 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_421157649-8978-33715 hallmark;refseq 29;18;9;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa ATCC 25324 prophage linear Cluster_0 Gammaproteobacteria_gi_421161204 hallmark;refseq 54;44;1;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa ATCC 25324 extrachromosomal linear Cluster_64 Gammaproteobacteria_gi_421162344 noncaudo 5;3;1;1 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa ATCC 25324 extrachromosomal linear Cluster_13 Gammaproteobacteria_gi_421165533-0-39830 hallmark;refseq 57;42;6;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa ATCC 700888 prophage linear Cluster_100 Gammaproteobacteria_gi_421165891 hallmark;refseq 13;12;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa ATCC 700888 extrachromosomal linear Cluster_164 Gammaproteobacteria_gi_421167368 hallmark;refseq 21;19;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa ATCC 700888 extrachromosomal linear Cluster_23 Gammaproteobacteria_gi_421169282-4091-9691 refseq 7;6;;1 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa ATCC 700888 prophage linear Cluster_13 Gammaproteobacteria_gi_421169913-11902-19102 refseq 10;8;1;1 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa ATCC 700888 prophage linear Cluster_13 Gammaproteobacteria_gi_421172173-0-28796 hallmark;refseq 45;44;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa CI27 prophage linear Cluster_59 Gammaproteobacteria_gi_421173259 hallmark;refseq 25;17;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa CI27 extrachromosomal linear Cluster_100 Gammaproteobacteria_gi_421175121 hallmark;refseq 21;20;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa CI27 extrachromosomal linear Cluster_100 Gammaproteobacteria_gi_421175743-205459-262548 hallmark;refseq 99;72;5;22 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa CI27 prophage linear Cluster_64 Gammaproteobacteria_gi_421175743-24-7818 noncaudo 12;8;1;3 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa CI27 prophage linear Cluster_13 Gammaproteobacteria_gi_421177901 noncaudo 12;2;3;7 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa CI27 extrachromosomal circular Cluster_175 Gammaproteobacteria_gi_421199284 hallmark;refseq 49;24;5;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii OIFC109 extrachromosomal linear Cluster_38 Gammaproteobacteria_gi_421205227 hallmark;refseq 41;32;3;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AC12 extrachromosomal linear Cluster_46 Gammaproteobacteria_gi_421205282 hallmark;refseq 57;33;6;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AC12 extrachromosomal linear Cluster_38 Gammaproteobacteria_gi_421264762 hallmark;refseq 49;25;17;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Pasteurella Pasteurella multocida subsp. multocida str. P52VAC extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_421264810 refseq;vdb 45;10;4;31 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Pasteurella Pasteurella multocida subsp. multocida str. P52VAC extrachromosomal linear Cluster_160 Gammaproteobacteria_gi_421264857 hallmark 15;6;2;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Pasteurella Pasteurella multocida subsp. multocida str. P52VAC extrachromosomal linear Cluster_572 Gammaproteobacteria_gi_421315965-796864-803847 noncaudo 10;4;3;3 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae CP1032(5) prophage linear Cluster_12 Gammaproteobacteria_gi_421316673-888647-895250 noncaudo 10;9;;1 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae CP1032(5) prophage linear Cluster_12 Gammaproteobacteria_gi_421320354-797635-802094 noncaudo 6;6;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae CP1038(11) prophage linear Cluster_12 Gammaproteobacteria_gi_421324351-797809-806169 noncaudo 12;9;1;2 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae CP1041(14) prophage linear Cluster_12 Gammaproteobacteria_gi_421328012-797509-802117 noncaudo 7;7;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae CP1042(15) prophage linear Cluster_12 Gammaproteobacteria_gi_421331799-784472-791465 noncaudo 10;4;3;3 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae CP1046(19) prophage linear Cluster_12 Gammaproteobacteria_gi_421332551-16199-58791 hallmark;refseq 51;25;;26 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae CP1046(19) prophage linear Cluster_248 Gammaproteobacteria_gi_421332911-410515-442757 hallmark;refseq 44;44;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae CP1046(19) prophage linear Cluster_97 Gammaproteobacteria_gi_421335270-55011-59570 noncaudo 7;7;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae CP1048(21) prophage linear Cluster_12 Gammaproteobacteria_gi_421338499-800101-810031 noncaudo 13;8;3;2 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-20A2 prophage linear Cluster_12 Gammaproteobacteria_gi_421346703-799810-804283 noncaudo 6;6;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-46A1 prophage linear Cluster_12 Gammaproteobacteria_gi_421350541-764345-773877 hallmark;refseq 17;12;;5 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HE-25 prophage linear Cluster_14 Gammaproteobacteria_gi_421433750-381-18560 hallmark;refseq 23;22;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. 648905 5-18 prophage linear Cluster_0 Gammaproteobacteria_gi_421449036-0-26172 hallmark;refseq 37;31;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. 58-6482 prophage linear Cluster_0 Gammaproteobacteria_gi_421455093 hallmark;refseq 50;23;6;21 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii IS-123 extrachromosomal linear Cluster_38 Gammaproteobacteria_gi_421466231 hallmark 32;11;3;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter radioresistens WC-A-157 extrachromosomal linear Cluster_28 Gammaproteobacteria_gi_421495319 hallmark;refseq 42;23;4;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Aeromonadales;Aeromonadaceae;Aeromonas Aeromonas media WS extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_421504438-357199-366052 noncaudo 16;3;2;11 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas mendocina DLHK prophage linear Cluster_163 Gammaproteobacteria_gi_421514606-788902-797266 noncaudo 10;7;1;2 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa PAO579 prophage linear Cluster_13 Gammaproteobacteria_gi_421530934 hallmark;refseq 22;11;5;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas putida S11 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_421535959 hallmark;refseq 41;25;5;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AC30 extrachromosomal linear Cluster_38 Gammaproteobacteria_gi_421536002 hallmark;refseq 20;19;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AC30 extrachromosomal linear Cluster_46 Gammaproteobacteria_gi_421576019-83734-125135 hallmark;refseq 56;47;3;6 Viruses;unclassified;unclassified;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Heidelberg str. CFSAN00325 prophage linear Cluster_1 Gammaproteobacteria_gi_421623336 refseq 23;11;4;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii OIFC074 extrachromosomal linear Cluster_109 Gammaproteobacteria_gi_421628443 hallmark;refseq 20;16;1;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii OIFC180 extrachromosomal linear Cluster_24 Gammaproteobacteria_gi_421630246 hallmark;refseq 22;12;3;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii OIFC180 extrachromosomal linear Cluster_46 Gammaproteobacteria_gi_421631422 hallmark;refseq 31;14;3;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii OIFC180 extrachromosomal linear Cluster_93 Gammaproteobacteria_gi_421641562 hallmark;refseq 28;18;2;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii IS-235 extrachromosomal linear Cluster_46 Gammaproteobacteria_gi_421643114-94899-110488 hallmark;refseq 20;19;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii IS-235 prophage linear Cluster_0 Gammaproteobacteria_gi_421643305 hallmark;refseq 29;20;2;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii IS-235 extrachromosomal linear Cluster_24 Gammaproteobacteria_gi_421645694 hallmark;refseq 40;26;5;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii IS-251 extrachromosomal linear Cluster_24 Gammaproteobacteria_gi_421646740-1775-17364 hallmark;refseq 20;19;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii IS-251 prophage linear Cluster_0 Gammaproteobacteria_gi_421646976 hallmark 33;8;6;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii IS-251 extrachromosomal linear Cluster_114 Gammaproteobacteria_gi_421648727 hallmark;refseq 28;18;2;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii IS-251 extrachromosomal linear Cluster_46 Gammaproteobacteria_gi_421652070-0-51475 hallmark;refseq 72;43;7;22 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii OIFC0162 prophage linear Cluster_24 Gammaproteobacteria_gi_421661713-0-7378 hallmark;noncaudo;vdb 11;3;1;7 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii OIFC110 prophage linear Cluster_416 Gammaproteobacteria_gi_421662044 refseq 12;7;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii OIFC110 extrachromosomal linear Cluster_275 Gammaproteobacteria_gi_421663172 hallmark;refseq 60;30;7;23 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii OIFC110 extrachromosomal linear Cluster_46 Gammaproteobacteria_gi_421663842 hallmark;refseq 17;15;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii OIFC110 extrachromosomal linear Cluster_46 Gammaproteobacteria_gi_421664879 refseq 28;17;3;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii OIFC110 extrachromosomal linear Cluster_38 Gammaproteobacteria_gi_421665919-1836-25157 hallmark;refseq 37;21;3;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii OIFC087 prophage linear Cluster_38 Gammaproteobacteria_gi_421667774 hallmark;refseq 17;15;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii OIFC087 extrachromosomal linear Cluster_46 Gammaproteobacteria_gi_421672213 hallmark;refseq 21;17;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii OIFC099 extrachromosomal linear Cluster_24 Gammaproteobacteria_gi_421672983 hallmark;refseq 49;27;9;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii OIFC065 extrachromosomal linear Cluster_24 Gammaproteobacteria_gi_421676758 hallmark;noncaudo 6;2;;4 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii OIFC065 extrachromosomal linear Cluster_232 Gammaproteobacteria_gi_421676779 hallmark;refseq 46;25;5;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii OIFC111 extrachromosomal linear Cluster_38 Gammaproteobacteria_gi_421677648-167-21318 hallmark;refseq 25;14;6;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii OIFC111 prophage linear Cluster_24 Gammaproteobacteria_gi_421679327 hallmark;refseq 122;47;25;50 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii OIFC111 extrachromosomal circular Cluster_53 Gammaproteobacteria_gi_421680545 hallmark;refseq 25;12;1;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella flexneri 1485-80 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_421680611 hallmark;refseq 18;18;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella flexneri 1485-80 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_421682113 hallmark 20;5;2;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella flexneri 1485-80 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_421682640-40648-61649 hallmark;refseq 23;13;9;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella flexneri 1485-80 prophage linear Cluster_4 Gammaproteobacteria_gi_421683688 hallmark;refseq 67;37;20;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella Shigella flexneri 1485-80 extrachromosomal linear Cluster_54 Gammaproteobacteria_gi_421686474 refseq 14;9;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii IS-143 extrachromosomal linear Cluster_267 Gammaproteobacteria_gi_421689343 hallmark;refseq 121;45;22;54 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii IS-143 extrachromosomal circular Cluster_53 Gammaproteobacteria_gi_421691305 hallmark;noncaudo 6;2;;4 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii IS-116 extrachromosomal linear Cluster_232 Gammaproteobacteria_gi_421692020 hallmark;refseq 48;27;9;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii IS-116 extrachromosomal linear Cluster_24 Gammaproteobacteria_gi_421695203 hallmark;refseq 48;27;4;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii WC-692 extrachromosomal linear Cluster_24 Gammaproteobacteria_gi_421699077 hallmark;refseq 29;19;2;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii IS-58 extrachromosomal linear Cluster_46 Gammaproteobacteria_gi_421699372 hallmark;refseq 27;20;2;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii IS-58 extrachromosomal linear Cluster_24 Gammaproteobacteria_gi_421701290-2867-18455 hallmark;refseq 21;19;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii IS-58 prophage linear Cluster_0 Gammaproteobacteria_gi_421702855 hallmark;refseq 33;20;4;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ZWS1122 extrachromosomal linear Cluster_38 Gammaproteobacteria_gi_421702891 refseq 13;7;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ZWS1122 extrachromosomal linear Cluster_24 Gammaproteobacteria_gi_421705363 hallmark;refseq 33;26;3;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ZWS1122 extrachromosomal linear Cluster_46 Gammaproteobacteria_gi_421706620 hallmark;refseq 31;21;4;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ZWS1219 extrachromosomal linear Cluster_24 Gammaproteobacteria_gi_421706653 hallmark;refseq 33;26;3;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ZWS1219 extrachromosomal linear Cluster_46 Gammaproteobacteria_gi_421777366-0-22709 hallmark;refseq 33;26;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli AD30 prophage linear Cluster_0 Gammaproteobacteria_gi_421778365-0-22827 hallmark;refseq 33;27;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli AD30 prophage linear Cluster_0 Gammaproteobacteria_gi_421778398 hallmark;refseq 41;26;8;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli AD30 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_421778664 hallmark;refseq 16;12;1;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli AD30 extrachromosomal linear Cluster_26 Gammaproteobacteria_gi_421789164 hallmark;refseq 20;9;2;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Twortlikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii Naval-82 extrachromosomal linear Cluster_53 Gammaproteobacteria_gi_421790481 hallmark;refseq 20;12;2;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii Naval-2 extrachromosomal linear Cluster_24 Gammaproteobacteria_gi_421791759 hallmark;refseq 40;20;2;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii Naval-2 extrachromosomal linear Cluster_93 Gammaproteobacteria_gi_421794482 hallmark;refseq 34;13;11;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Tunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii Naval-2 extrachromosomal linear Cluster_169 Gammaproteobacteria_gi_421798195 refseq 21;10;4;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii Naval-21 extrachromosomal linear Cluster_109 Gammaproteobacteria_gi_421799980 hallmark;refseq 29;19;2;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii Canada BC1 extrachromosomal linear Cluster_46 Gammaproteobacteria_gi_421801088 hallmark;refseq 31;20;2;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii Canada BC1 extrachromosomal linear Cluster_24 Gammaproteobacteria_gi_421808573 hallmark;refseq 122;47;25;50 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii OIFC035 extrachromosomal circular Cluster_53 Gammaproteobacteria_gi_421812792 hallmark;refseq 14;13;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 8.0416 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_421815912 hallmark;refseq 20;19;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 8.0416 extrachromosomal linear Cluster_7 Gammaproteobacteria_gi_421817097 hallmark;refseq 20;16;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 10.0821 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_421817742 hallmark;refseq 12;10;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 10.0821 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_421821522 hallmark;refseq 46;21;15;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli FRIK920 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_421822881 hallmark;refseq 17;12;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli FRIK920 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_421822901 refseq 12;10;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli FRIK920 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_421823452 hallmark;refseq 16;13;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli FRIK920 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_421823473 hallmark;refseq 19;17;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli FRIK920 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_421823769 refseq 29;17;12; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli FRIK920 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_421824397 hallmark;refseq 27;26;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli FRIK920 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_421824467-94630-125314 hallmark;refseq 45;39;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli FRIK920 prophage linear Cluster_0 Gammaproteobacteria_gi_421825147 hallmark;refseq 25;24;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli FRIK920 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_421825180 refseq 24;22;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli FRIK920 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_421825205 refseq 23;21;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli FRIK920 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_421825233 hallmark;refseq 24;23;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli FRIK920 extrachromosomal linear Cluster_7 Gammaproteobacteria_gi_421825258 refseq 26;20;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli FRIK920 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_421829629-202-61012 hallmark;refseq;vdb 76;46;16;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA7 prophage linear Cluster_3 Gammaproteobacteria_gi_421830005 hallmark;refseq 18;14;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA7 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_421830262 hallmark;refseq 21;18;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA7 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_421830672 refseq 26;15;11; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA7 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_421831595 hallmark;refseq 15;15;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA7 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_421831613 refseq 27;24;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA7 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_421833224 refseq 12;8;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA7 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_421884569 refseq 23;19;;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Senftenberg str. SS209 extrachromosomal linear Cluster_23 Gammaproteobacteria_gi_421886289-747-19812 hallmark;refseq 20;17;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Senftenberg str. SS209 prophage linear Cluster_22 Gammaproteobacteria_gi_421909911 hallmark;refseq 27;17;3;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae ST258-K26BO extrachromosomal linear Cluster_410 Gammaproteobacteria_gi_421911146-14084-33094 hallmark;refseq 32;25;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae ST258-K26BO prophage linear Cluster_37 Gammaproteobacteria_gi_421912220 hallmark;refseq 30;24;;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae ST258-K26BO extrachromosomal linear Cluster_7 Gammaproteobacteria_gi_421913411 hallmark;refseq 11;10;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae ST258-K26BO extrachromosomal linear Cluster_7 Gammaproteobacteria_gi_421913615-10310-56262 hallmark;refseq 61;44;6;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae ST258-K26BO prophage linear Cluster_25 Gammaproteobacteria_gi_421914088 hallmark;refseq 20;19;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae ST258-K28BO extrachromosomal linear Cluster_7 Gammaproteobacteria_gi_421915755-10236-47317 hallmark;refseq 56;39;6;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae ST258-K28BO prophage linear Cluster_148 Gammaproteobacteria_gi_421916668 hallmark;refseq 35;25;4;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae ST258-K28BO extrachromosomal linear Cluster_25 Gammaproteobacteria_gi_421918113 hallmark;refseq 23;18;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae ST258-K28BO extrachromosomal linear Cluster_92 Gammaproteobacteria_gi_421918613-14242-33096 hallmark;refseq 32;25;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae ST258-K28BO prophage linear Cluster_37 Gammaproteobacteria_gi_422010612 refseq 19;18;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Punalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O111:H11 str. CVM9455 extrachromosomal linear Cluster_19 Gammaproteobacteria_gi_422030165 hallmark;refseq 14;14;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. STm2 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_422031237 hallmark;refseq 31;31;; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. STm2 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_422031270 refseq 20;18;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. STm2 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_422031937 hallmark;refseq 18;17;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. STm2 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_422033468-20520-33014 hallmark;refseq;vdb 11;10;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. STm2 prophage linear Cluster_22 Gammaproteobacteria_gi_422296547-57724-73852 hallmark;vdb 21;10;7;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas avellanae BPIC 631 prophage linear Cluster_3 Gammaproteobacteria_gi_422299174 hallmark;vdb 41;14;9;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas avellanae BPIC 631 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_422331065-477379-491009 hallmark;refseq 17;14;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 4_1_47FAA prophage linear Cluster_22 Gammaproteobacteria_gi_422333904-55590-88033 hallmark;refseq 47;37;4;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 4_1_47FAA prophage linear Cluster_0 Gammaproteobacteria_gi_422335723-10731-31439 hallmark;refseq 25;17;5;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 4_1_47FAA prophage linear Cluster_0 Gammaproteobacteria_gi_422354371 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MS 117-3 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_422360219 hallmark;refseq 24;17;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MS 110-3 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_422364215-4876-18544 hallmark;refseq 15;13;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MS 153-1 prophage linear Cluster_2 Gammaproteobacteria_gi_422366479 hallmark;refseq 14;10;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MS 153-1 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_422371944-96126-128409 hallmark;refseq 45;34;5;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MS 16-3 prophage linear Cluster_0 Gammaproteobacteria_gi_422372695 hallmark;refseq 3;3;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MS 60-1 extrachromosomal linear Cluster_36 Gammaproteobacteria_gi_422373652 hallmark;refseq 23;18;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MS 60-1 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_422373743-80-24566 hallmark;refseq 33;30;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MS 60-1 prophage linear Cluster_3 Gammaproteobacteria_gi_422375036 hallmark;refseq 50;34;7;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MS 60-1 extrachromosomal linear Cluster_21 Gammaproteobacteria_gi_422375811-31675-52628 hallmark;refseq 32;17;12;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MS 60-1 prophage linear Cluster_10 Gammaproteobacteria_gi_422377856 hallmark;refseq 23;16;3;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MS 60-1 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_422380176-18493-59604 hallmark;refseq 55;49;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MS 57-2 prophage linear Cluster_7 Gammaproteobacteria_gi_422380790-715-22772 hallmark;refseq 29;27;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MS 57-2 prophage linear Cluster_3 Gammaproteobacteria_gi_422579926 hallmark;refseq 22;9;2;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. aesculi str. 0893_23 extrachromosomal linear Cluster_476 Gammaproteobacteria_gi_422583646-46508-66176 hallmark;vdb 25;9;10;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. aesculi str. 0893_23 prophage linear Cluster_3 Gammaproteobacteria_gi_422594891-259905-266279 noncaudo 15;3;1;11 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. lachrymans str. M301315 prophage linear Cluster_14 Gammaproteobacteria_gi_422597474-64764-94809 hallmark;refseq 48;22;6;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. lachrymans str. M301315 prophage linear Cluster_83 Gammaproteobacteria_gi_422599187 hallmark;refseq 32;17;5;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. lachrymans str. M301315 extrachromosomal linear Cluster_26 Gammaproteobacteria_gi_422599245 hallmark;refseq 30;19;3;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. lachrymans str. M301315 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_422649256 hallmark;refseq 37;20;10;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. actinidiae str. M302091 extrachromosomal linear Cluster_71 Gammaproteobacteria_gi_422676627 hallmark;refseq 34;18;5;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. aceris str. M302273 extrachromosomal linear Cluster_83 Gammaproteobacteria_gi_422676692 hallmark;refseq 33;21;2;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. aceris str. M302273 extrachromosomal linear Cluster_64 Gammaproteobacteria_gi_422748737-632908-665688 hallmark;refseq 39;33;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli H252 prophage linear Cluster_0 Gammaproteobacteria_gi_422752328 hallmark;refseq 117;73;13;31 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli H252 extrachromosomal linear Cluster_79 Gammaproteobacteria_gi_422752550 hallmark;refseq 53;41;7;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli H252 extrachromosomal linear Cluster_11 Gammaproteobacteria_gi_422752670 hallmark;refseq 27;23;;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli H252 extrachromosomal linear Cluster_7 Gammaproteobacteria_gi_422757812 hallmark;refseq 12;8;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli H263 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_422760734-610454-628513 hallmark;refseq 23;21;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli E1167 prophage linear Cluster_0 Gammaproteobacteria_gi_422762464-586051-604540 hallmark;refseq 26;21;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli E1167 prophage linear Cluster_0 Gammaproteobacteria_gi_422763052-297573-340792 hallmark;refseq 55;40;13;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli E1167 prophage linear Cluster_1 Gammaproteobacteria_gi_422763843-214873-228581 hallmark;refseq 18;14;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli E1167 prophage linear Cluster_0 Gammaproteobacteria_gi_422764518-219-34601 hallmark;refseq 49;41;4;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli E1167 prophage linear Cluster_3 Gammaproteobacteria_gi_422764745-2026462-2058127 hallmark;refseq 42;34;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli E1520 prophage linear Cluster_0 Gammaproteobacteria_gi_422764745-2357239-2396563 hallmark;refseq 57;52;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli E1520 prophage linear Cluster_11 Gammaproteobacteria_gi_422769253 refseq 101;51;30;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli E1520 extrachromosomal linear Cluster_19 Gammaproteobacteria_gi_422774023-552464-576596 hallmark;refseq 28;23;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli H120 prophage linear Cluster_1 Gammaproteobacteria_gi_422778611-66426-76531 hallmark;refseq;vdb 14;11;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli H120 prophage linear Cluster_0 Gammaproteobacteria_gi_422778688-0-22118 hallmark;refseq 27;18;2;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli H120 prophage linear Cluster_0 Gammaproteobacteria_gi_422784853-1906172-1939287 hallmark;refseq 43;36;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli H489 prophage linear Cluster_0 Gammaproteobacteria_gi_422794165 hallmark;refseq 103;93;6;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TA007 extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_422794449 hallmark;refseq 44;21;6;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TA007 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_422799904-517623-552601 hallmark;refseq 48;42;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli M863 prophage linear Cluster_11 Gammaproteobacteria_gi_422801730-377523-408698 hallmark;refseq 44;31;8;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli M863 prophage linear Cluster_1 Gammaproteobacteria_gi_422802113-364843-398441 hallmark;refseq 51;38;12;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli M863 prophage linear Cluster_1 Gammaproteobacteria_gi_422802482-263481-280844 hallmark;refseq 19;13;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli M863 prophage linear Cluster_1 Gammaproteobacteria_gi_422803715 hallmark;refseq 14;9;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli M863 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_422803864-2325999-2355514 hallmark;refseq 39;32;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia fergusonii B253 prophage linear Cluster_0 Gammaproteobacteria_gi_422806576-278763-323438 hallmark;refseq;vdb 54;34;16;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia fergusonii B253 prophage linear Cluster_2 Gammaproteobacteria_gi_422806576-624423-639894 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia fergusonii B253 prophage linear Cluster_22 Gammaproteobacteria_gi_422815473-51972-102154 hallmark;refseq 67;53;10;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli M919 prophage linear Cluster_2 Gammaproteobacteria_gi_422815473-843850-873534 hallmark;refseq 40;38;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli M919 prophage linear Cluster_3 Gammaproteobacteria_gi_422819118-721169-750812 hallmark;refseq 36;29;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli M919 prophage linear Cluster_1 Gammaproteobacteria_gi_422829076-2807-16915 hallmark;refseq 17;15;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B093 prophage linear Cluster_22 Gammaproteobacteria_gi_422830174 hallmark;refseq 101;86;6;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B093 extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_422830949-0-33852 hallmark;refseq 50;41;5;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B093 prophage linear Cluster_3 Gammaproteobacteria_gi_422835244-0-36075 hallmark;refseq 48;37;11; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli E101 prophage linear Cluster_1 Gammaproteobacteria_gi_422836537-0-34603 hallmark;refseq 49;30;11;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli E101 prophage linear Cluster_4 Gammaproteobacteria_gi_422836753 hallmark;refseq;vdb 34;20;7;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli E101 extrachromosomal linear Cluster_26 Gammaproteobacteria_gi_422837102 refseq 10;8;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli E101 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_422891671 refseq 3;3;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-40A1 extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_422891674 refseq 5;5;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-40A1 extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_422894973 hallmark 17;5;2;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-40A1 extrachromosomal linear Cluster_285 Gammaproteobacteria_gi_422902773 refseq 3;3;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-48A1 extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_422902776 refseq 4;4;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-48A1 extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_422903099 hallmark 20;5;3;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-48A1 extrachromosomal linear Cluster_285 Gammaproteobacteria_gi_422906614-53148-57479 noncaudo 6;6;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-70A1 prophage linear Cluster_12 Gammaproteobacteria_gi_422906659 refseq 3;3;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-70A1 extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_422907959-32861-63384 hallmark;refseq 44;39;;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HE-09 prophage linear Cluster_97 Gammaproteobacteria_gi_422913512 refseq 3;3;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HFU-02 extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_422913515 refseq 7;7;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HFU-02 extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_422915566 hallmark;refseq 10;10;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-02A1 extrachromosomal linear Cluster_14 Gammaproteobacteria_gi_422920756-463-3233 noncaudo 5;4;1; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae BJG-01 prophage linear Cluster_14 Gammaproteobacteria_gi_422922751-14837-17220 noncaudo 4;2;1;1 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae BJG-01 prophage linear Cluster_14 Gammaproteobacteria_gi_422924100 hallmark;refseq 3;3;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae BJG-01 extrachromosomal linear Cluster_242 Gammaproteobacteria_gi_422924116 hallmark;refseq 3;3;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae BJG-01 extrachromosomal linear Cluster_242 Gammaproteobacteria_gi_422925673-54310-58270 noncaudo 5;5;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-38A1 prophage linear Cluster_12 Gammaproteobacteria_gi_422925717 refseq 3;3;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-38A1 extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_422958368-573227-606137 hallmark;refseq 41;33;6;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli H494 prophage linear Cluster_0 Gammaproteobacteria_gi_422978459-57-35892 hallmark;refseq 48;31;11;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TA124 prophage linear Cluster_1 Gammaproteobacteria_gi_422979918 hallmark;refseq 26;23;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TA124 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_422980172 refseq 17;10;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TA124 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_422987226-323200-382559 hallmark;refseq 68;51;8;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. C227-11 prophage linear Cluster_5 Gammaproteobacteria_gi_422990407-1147074-1189557 hallmark;refseq 57;43;10;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. C227-11 prophage linear Cluster_1 Gammaproteobacteria_gi_422990407-1454426-1519565 hallmark;refseq 67;64;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. C227-11 prophage linear Cluster_5 Gammaproteobacteria_gi_422992349-1142705-1185188 hallmark;refseq 57;43;10;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. C236-11 prophage linear Cluster_1 Gammaproteobacteria_gi_422992349-1450057-1510579 hallmark;refseq 74;71;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. C236-11 prophage linear Cluster_5 Gammaproteobacteria_gi_422992349-2180907-2240383 hallmark;refseq 69;53;8;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. C236-11 prophage linear Cluster_5 Gammaproteobacteria_gi_422997572-1129527-1173151 hallmark;refseq 57;43;10;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 09-7901 prophage linear Cluster_1 Gammaproteobacteria_gi_422997572-1477268-1537713 hallmark;refseq 73;72;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 09-7901 prophage linear Cluster_5 Gammaproteobacteria_gi_423002516-692586-754687 hallmark;refseq 80;58;11;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 04-8351 prophage linear Cluster_5 Gammaproteobacteria_gi_423006539-582640-626264 hallmark;refseq 56;43;10;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 04-8351 prophage linear Cluster_1 Gammaproteobacteria_gi_423006539-930381-990824 hallmark;refseq 73;71;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 04-8351 prophage linear Cluster_5 Gammaproteobacteria_gi_423007663-1140088-1182571 hallmark;refseq 57;43;10;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 11-3677 prophage linear Cluster_1 Gammaproteobacteria_gi_423007663-1447440-1507836 hallmark;refseq 71;70;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 11-3677 prophage linear Cluster_5 Gammaproteobacteria_gi_423007663-1824140-1869498 hallmark;refseq 59;32;17;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 11-3677 prophage linear Cluster_1 Gammaproteobacteria_gi_423007663-2176946-2236831 hallmark;refseq 70;54;8;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 11-3677 prophage linear Cluster_5 Gammaproteobacteria_gi_423021847-1146020-1188503 hallmark;refseq 57;43;10;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 11-4404 prophage linear Cluster_1 Gammaproteobacteria_gi_423021847-1453372-1517105 hallmark;refseq 69;64;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 11-4404 prophage linear Cluster_5 Gammaproteobacteria_gi_423024121-0-40706 hallmark;refseq 57;39;8;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 11-4522 prophage linear Cluster_5 Gammaproteobacteria_gi_423024121-369741-417833 hallmark;refseq 64;46;13;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 11-4522 prophage linear Cluster_1 Gammaproteobacteria_gi_423026996-1151788-1194271 hallmark;refseq 57;43;10;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 11-4522 prophage linear Cluster_1 Gammaproteobacteria_gi_423026996-1459140-1518588 hallmark;refseq 71;70;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 11-4522 prophage linear Cluster_5 Gammaproteobacteria_gi_423026996-1835207-1882805 hallmark;refseq 60;32;17;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 11-4522 prophage linear Cluster_1 Gammaproteobacteria_gi_423029241-0-33902 hallmark;refseq 34;34;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 11-4623 prophage linear Cluster_5 Gammaproteobacteria_gi_423029241-1093866-1144753 hallmark;refseq 66;44;12;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 11-4623 prophage linear Cluster_1 Gammaproteobacteria_gi_423029241-350266-397760 hallmark;refseq 61;33;17;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 11-4623 prophage linear Cluster_1 Gammaproteobacteria_gi_423029241-705117-764824 hallmark;refseq 74;55;8;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 11-4623 prophage linear Cluster_5 Gammaproteobacteria_gi_423032836-1143297-1185780 hallmark;refseq 57;43;10;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 11-4623 prophage linear Cluster_1 Gammaproteobacteria_gi_423035723-1123586-1166069 hallmark;refseq 57;43;10;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 11-4632 C1 prophage linear Cluster_1 Gammaproteobacteria_gi_423035723-1430938-1497482 hallmark;refseq 70;69;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 11-4632 C1 prophage linear Cluster_5 Gammaproteobacteria_gi_423035723-2170424-2226406 hallmark;refseq 67;45;8;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 11-4632 C1 prophage linear Cluster_5 Gammaproteobacteria_gi_423035723-2556023-2604130 hallmark;refseq 63;46;13;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 11-4632 C1 prophage linear Cluster_1 Gammaproteobacteria_gi_423040825-1159199-1201682 hallmark;refseq 57;43;10;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 11-4632 C2 prophage linear Cluster_1 Gammaproteobacteria_gi_423040825-1466551-1527556 hallmark;refseq 71;69;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 11-4632 C2 prophage linear Cluster_5 Gammaproteobacteria_gi_423040825-2199041-2258545 hallmark;refseq 72;55;8;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 11-4632 C2 prophage linear Cluster_5 Gammaproteobacteria_gi_423040825-2585840-2634586 hallmark;refseq 66;45;12;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 11-4632 C2 prophage linear Cluster_1 Gammaproteobacteria_gi_423047512-1143489-1185972 hallmark;refseq 57;43;10;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 11-4632 C3 prophage linear Cluster_1 Gammaproteobacteria_gi_423047512-1450841-1511956 hallmark;refseq 69;66;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 11-4632 C3 prophage linear Cluster_5 Gammaproteobacteria_gi_423047512-1827950-1877412 hallmark;refseq 61;32;17;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 11-4632 C3 prophage linear Cluster_1 Gammaproteobacteria_gi_423051594-1642481-1701955 hallmark;refseq 73;55;9;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 11-4632 C4 prophage linear Cluster_5 Gammaproteobacteria_gi_423051594-603055-645538 hallmark;refseq 57;43;10;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 11-4632 C4 prophage linear Cluster_1 Gammaproteobacteria_gi_423051594-910407-970803 hallmark;refseq 71;70;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 11-4632 C4 prophage linear Cluster_5 Gammaproteobacteria_gi_423058060-1144393-1186876 hallmark;refseq 57;43;10;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 11-4632 C5 prophage linear Cluster_1 Gammaproteobacteria_gi_423058060-1451745-1512336 hallmark;refseq 71;70;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 11-4632 C5 prophage linear Cluster_5 Gammaproteobacteria_gi_423058060-2183376-2242881 hallmark;refseq 70;54;8;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 11-4632 C5 prophage linear Cluster_5 Gammaproteobacteria_gi_423112131 hallmark;refseq 121;97;9;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella oxytoca 10-5243 extrachromosomal circular Cluster_9 Gammaproteobacteria_gi_423123271 hallmark;refseq 33;14;6;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella oxytoca 10-5246 extrachromosomal linear Cluster_72 Gammaproteobacteria_gi_423123309-1034864-1082210 hallmark;refseq 63;41;7;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella oxytoca 10-5250 prophage linear Cluster_26 Gammaproteobacteria_gi_423144995-54409-58369 noncaudo 5;5;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-19A1 prophage linear Cluster_12 Gammaproteobacteria_gi_423145041 refseq 3;3;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-19A1 extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_423149156-628339-632299 noncaudo 5;5;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-21A1 prophage linear Cluster_12 Gammaproteobacteria_gi_423149716 refseq 3;3;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-21A1 extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_423153004-596953-600913 noncaudo 5;5;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-22A1 prophage linear Cluster_12 Gammaproteobacteria_gi_423153529 refseq 3;3;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-22A1 extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_423155783-627529-631860 noncaudo 6;6;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-32A1 prophage linear Cluster_12 Gammaproteobacteria_gi_423156621 refseq 3;3;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-32A1 extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_423159604-633528-637488 noncaudo 5;5;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-33A2 prophage linear Cluster_12 Gammaproteobacteria_gi_423160188 refseq 3;3;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-33A2 extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_423164883 noncaudo 8;2;3;3 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-48B2 extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_423164990 refseq 8;7;1; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-48B2 extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_423165327 hallmark 17;5;2;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-48B2 extrachromosomal linear Cluster_285 Gammaproteobacteria_gi_423659539 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA31 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_423700469-1136677-1184472 hallmark;refseq 63;45;9;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli H730 prophage linear Cluster_1 Gammaproteobacteria_gi_423702445-1070545-1099035 hallmark;refseq 37;34;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli H730 prophage linear Cluster_0 Gammaproteobacteria_gi_423705524-1067772-1106628 hallmark;refseq 52;47;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B799 prophage linear Cluster_7 Gammaproteobacteria_gi_423705524-443844-494650 hallmark;refseq 66;48;1;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B799 prophage linear Cluster_3 Gammaproteobacteria_gi_423709934-388204-408836 hallmark;refseq 30;19;11; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B799 prophage linear Cluster_1 Gammaproteobacteria_gi_423710565 hallmark;refseq 69;32;14;23 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B799 extrachromosomal circular Cluster_48 Gammaproteobacteria_gi_423724035-12174-48862 hallmark;refseq;vdb 51;24;15;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA31 prophage linear Cluster_3 Gammaproteobacteria_gi_423725952 refseq 13;13;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA31 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_423725968 hallmark;refseq 12;12;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA31 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_423730979-54374-58334 noncaudo 5;5;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-17A1 prophage linear Cluster_12 Gammaproteobacteria_gi_423731025 refseq 3;3;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-17A1 extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_423758189 refseq 8;7;1; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-50A2 extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_423823975 hallmark;refseq 12;11;;1 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-55C2 extrachromosomal linear Cluster_14 Gammaproteobacteria_gi_423833708 hallmark;refseq 12;12;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-59A1 extrachromosomal linear Cluster_14 Gammaproteobacteria_gi_423859287 hallmark;refseq 11;11;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-60A1 extrachromosomal linear Cluster_14 Gammaproteobacteria_gi_423892669-53161-57492 noncaudo 6;6;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-62A1 prophage linear Cluster_12 Gammaproteobacteria_gi_423893364 refseq 3;3;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-62A1 extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_423928291 refseq 3;3;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-77A1 extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_423928587 refseq 6;6;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-77A1 extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_423999178 hallmark;refseq 11;11;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-02C1 extrachromosomal linear Cluster_14 Gammaproteobacteria_gi_424002314-54018-58349 noncaudo 6;6;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-17A2 prophage linear Cluster_12 Gammaproteobacteria_gi_424002475 refseq 3;3;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-17A2 extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_424006251 refseq 3;3;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-37A1 extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_424006254 refseq 7;7;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-37A1 extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_424011804 hallmark;refseq 10;10;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-55B2 extrachromosomal linear Cluster_14 Gammaproteobacteria_gi_424021622 hallmark;refseq 11;11;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-59B1 extrachromosomal linear Cluster_14 Gammaproteobacteria_gi_424024169-54318-58979 noncaudo 6;5;1; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-62B1 prophage linear Cluster_12 Gammaproteobacteria_gi_424024240 refseq 4;4;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-62B1 extrachromosomal circular Cluster_12 Gammaproteobacteria_gi_424027118 refseq 3;3;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-69A1 extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_424027121 refseq 7;7;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-69A1 extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_424032399-29-13053 hallmark;noncaudo 18;8;1;9 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio sp. HENC-01 prophage linear Cluster_14 Gammaproteobacteria_gi_424044467 refseq 5;5;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio sp. HENC-03 extrachromosomal linear Cluster_551 Gammaproteobacteria_gi_424044476 refseq 4;4;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio sp. HENC-03 extrachromosomal linear Cluster_551 Gammaproteobacteria_gi_424051190 hallmark;refseq 119;47;22;50 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii Ab11111 extrachromosomal linear Cluster_53 Gammaproteobacteria_gi_424056504 hallmark;refseq 42;20;2;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter nosocomialis Ab22222 extrachromosomal linear Cluster_24 Gammaproteobacteria_gi_424075670 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli FDA505 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_424076549 hallmark;vdb 41;10;23;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli FDA505 extrachromosomal linear Cluster_33 Gammaproteobacteria_gi_424076601 hallmark;refseq 27;21;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli FDA505 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_424078392 refseq 14;14;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli FDA505 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_424078409 hallmark;refseq 12;12;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli FDA505 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_424081365-900-19401 hallmark;refseq 23;23;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli FDA517 prophage linear Cluster_3 Gammaproteobacteria_gi_424081997 hallmark;refseq 18;15;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli FDA517 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_424084349 refseq 16;15;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli FDA517 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_424084412-58323-89007 hallmark;refseq 45;38;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli FDA517 prophage linear Cluster_0 Gammaproteobacteria_gi_424084849-169180-207366 hallmark;refseq 50;49;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli FDA517 prophage linear Cluster_7 Gammaproteobacteria_gi_424087352 hallmark;refseq 26;18;5;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli FRIK1996 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_424087988-8413-22203 hallmark;refseq 20;20;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli FRIK1996 prophage linear Cluster_3 Gammaproteobacteria_gi_424088630 hallmark;refseq 20;17;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli FRIK1996 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_424089016 hallmark;refseq 14;11;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli FRIK1996 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_424089472-0-28613 hallmark;refseq 34;15;13;6 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli FRIK1996 prophage linear Cluster_33 Gammaproteobacteria_gi_424089517 hallmark;refseq 20;18;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli FRIK1996 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_424090918-1387-49773 hallmark;refseq 43;37;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli FRIK1996 prophage linear Cluster_0 Gammaproteobacteria_gi_424093747 hallmark;refseq 19;19;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli FRIK1985 extrachromosomal linear Cluster_7 Gammaproteobacteria_gi_424094204-908-19409 hallmark;refseq 23;23;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli FRIK1985 prophage linear Cluster_3 Gammaproteobacteria_gi_424094844 hallmark;refseq 18;15;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli FRIK1985 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_424097365 refseq 15;14;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli FRIK1985 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_424097489-3-31254 hallmark;refseq 46;39;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli FRIK1985 prophage linear Cluster_0 Gammaproteobacteria_gi_424101254 hallmark;refseq 21;18;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli FRIK1990 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_424101464-789-22997 hallmark;refseq 26;22;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli FRIK1990 prophage linear Cluster_0 Gammaproteobacteria_gi_424103601 refseq 21;19;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli FRIK1990 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_424104119 hallmark;refseq 11;11;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli FRIK1990 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_424106593 hallmark;refseq 15;15;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli FRIK1990 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_424106958 hallmark;refseq 51;24;15;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 93-001 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_424108058 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 93-001 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_424108950-14735-36526 hallmark;vdb 16;8;6;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 93-001 prophage linear Cluster_4 Gammaproteobacteria_gi_424109299 hallmark;refseq 26;12;7;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 93-001 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_424110808 hallmark;refseq 12;12;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 93-001 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_424114051 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA3 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_424116144-51791-64687 hallmark;refseq;vdb 13;9;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA3 prophage linear Cluster_0 Gammaproteobacteria_gi_424116206-0-22549 hallmark;refseq 31;25;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA3 prophage linear Cluster_0 Gammaproteobacteria_gi_424120106 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA5 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_424120992-11041-25245 hallmark;vdb 21;7;9;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA5 prophage linear Cluster_4 Gammaproteobacteria_gi_424121041 hallmark;refseq 24;19;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA5 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_424122909 refseq 13;13;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA5 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_424122924 hallmark;refseq 13;13;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA5 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_424126348 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA9 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_424127174-245-28460 hallmark;vdb 26;8;11;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA9 prophage linear Cluster_33 Gammaproteobacteria_gi_424127493 hallmark 26;11;6;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA9 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_424128371 hallmark;refseq 26;17;6;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA9 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_424128674-162-23948 hallmark;refseq 32;26;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA9 prophage linear Cluster_0 Gammaproteobacteria_gi_424129067 hallmark;refseq 13;13;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA9 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_424131734-24265-58005 hallmark;refseq 48;42;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA10 prophage linear Cluster_3 Gammaproteobacteria_gi_424132458 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA10 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_424134750 refseq 18;17;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA10 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_424134919 hallmark;refseq 18;15;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA10 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_424134939 hallmark;refseq 14;11;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA10 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_424135316 hallmark;refseq 11;11;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA10 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_424135359 refseq 43;38;1;4 Viruses;unclassified phages;unknown;unknown;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA10 extrachromosomal linear Cluster_174 Gammaproteobacteria_gi_424137796-1376-14609 hallmark;refseq 18;13;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA10 prophage linear Cluster_0 Gammaproteobacteria_gi_424139000 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA14 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_424139939-245-21370 hallmark;vdb 27;8;13;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA14 prophage linear Cluster_33 Gammaproteobacteria_gi_424141905 refseq 13;13;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA14 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_424141919 hallmark;refseq 12;12;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA14 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_424145438 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA15 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_424148225 refseq 15;15;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA15 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_424148245 hallmark;refseq 12;12;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA15 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_424151570 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA24 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_424153766-56256-79067 hallmark;refseq 27;23;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA24 prophage linear Cluster_0 Gammaproteobacteria_gi_424187995 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA25 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_424244885-58371-89433 hallmark;refseq 42;35;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA25 prophage linear Cluster_0 Gammaproteobacteria_gi_424271633 hallmark;refseq 17;14;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA28 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_424292465-245-28991 hallmark;vdb 27;8;13;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA28 prophage linear Cluster_33 Gammaproteobacteria_gi_424323921-53586-66765 hallmark;refseq;vdb 13;9;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA28 prophage linear Cluster_0 Gammaproteobacteria_gi_424323980-0-22564 hallmark;refseq 31;25;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA28 prophage linear Cluster_0 Gammaproteobacteria_gi_424325907 hallmark;refseq 15;14;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA28 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_424424511 hallmark;refseq 22;16;6; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA32 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_424438250-0-43903 hallmark;refseq 50;23;18;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA32 prophage linear Cluster_33 Gammaproteobacteria_gi_424450598 refseq 13;13;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA32 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_424450614 hallmark;refseq 12;12;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA32 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_424450628 refseq 25;23;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA32 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_424453988 hallmark;refseq 20;16;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA33 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_424454879-13724-46553 hallmark;refseq 36;21;10;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA33 prophage linear Cluster_1 Gammaproteobacteria_gi_424456792 refseq 13;13;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA33 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_424456807 hallmark;refseq 12;12;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA33 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_424460293 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA39 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_424461220-249-29926 hallmark;vdb 30;9;14;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA39 prophage linear Cluster_33 Gammaproteobacteria_gi_424462753-29941-51480 hallmark;refseq 27;23;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA39 prophage linear Cluster_0 Gammaproteobacteria_gi_424463184 refseq 14;12;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA39 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_424463204 hallmark;refseq 13;13;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA39 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_424463234 refseq 44;38;1;5 Viruses;unclassified phages;unknown;unknown;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA39 extrachromosomal linear Cluster_174 Gammaproteobacteria_gi_424466122-8453-25973 hallmark;refseq 23;23;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA41 prophage linear Cluster_3 Gammaproteobacteria_gi_424466765 hallmark;refseq 22;18;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA41 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_424467691-0-28596 hallmark;refseq 34;16;12;6 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA41 prophage linear Cluster_33 Gammaproteobacteria_gi_424469133-56521-87205 hallmark;refseq 45;39;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA41 prophage linear Cluster_0 Gammaproteobacteria_gi_424471838-3715-18116 hallmark;refseq 15;10;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA41 prophage linear Cluster_3 Gammaproteobacteria_gi_424472129 hallmark;refseq 51;23;16;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA42 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_424473325 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA42 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_424476126 refseq 15;15;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA42 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_424476145 hallmark;refseq 12;12;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA42 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_424479264 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW07945 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_424480067-247-29761 hallmark;vdb 29;8;14;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW07945 prophage linear Cluster_33 Gammaproteobacteria_gi_424481419-28242-49993 hallmark;refseq 30;24;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW07945 prophage linear Cluster_0 Gammaproteobacteria_gi_424481833 refseq 13;11;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW07945 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_424485327 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW09098 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_424486177-239-29682 hallmark;vdb 27;8;13;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW09098 prophage linear Cluster_33 Gammaproteobacteria_gi_424486506 hallmark 26;11;6;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW09098 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_424487559-56296-79102 hallmark;refseq 28;24;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW09098 prophage linear Cluster_0 Gammaproteobacteria_gi_424488000 hallmark;refseq 12;12;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW09098 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_424488024 refseq 30;28;1;1 Viruses;unclassified phages;unknown;unknown;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW09098 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_424490795 hallmark;refseq 18;12;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW09195 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_424490814 hallmark;refseq 20;19;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW09195 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_424491501 hallmark;refseq 20;17;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW09195 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_424494119-45549-69396 hallmark;refseq 33;27;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW09195 prophage linear Cluster_0 Gammaproteobacteria_gi_424494256 refseq 7;5;2; Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW09195 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_424497494 hallmark;refseq 49;23;13;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW09195 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_424498552 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC4203 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_424500954-0-22734 hallmark;refseq 31;25;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC4203 prophage linear Cluster_0 Gammaproteobacteria_gi_424504780 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC4196 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_424507143-864-24533 hallmark;refseq 32;26;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC4196 prophage linear Cluster_0 Gammaproteobacteria_gi_424511034 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW14313 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_424512270 hallmark 26;11;6;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW14313 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_424514470-55629-77040 hallmark;refseq 28;23;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW14313 prophage linear Cluster_0 Gammaproteobacteria_gi_424514910 refseq 14;12;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW14313 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_424514931 hallmark;refseq 13;13;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW14313 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_424514955 refseq 43;38;1;4 Viruses;unclassified phages;unknown;unknown;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW14313 extrachromosomal linear Cluster_174 Gammaproteobacteria_gi_424519481 refseq 12;10;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW14301 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_424520804-56460-87144 hallmark;refseq 45;39;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW14301 prophage linear Cluster_0 Gammaproteobacteria_gi_424524434 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC4421 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_424525304-241-43655 hallmark;refseq 48;23;17;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC4421 prophage linear Cluster_33 Gammaproteobacteria_gi_424526955 hallmark;refseq 21;19;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC4421 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_424530634 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC4422 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_424531470-0-25687 hallmark;refseq 31;8;16;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC4422 prophage linear Cluster_33 Gammaproteobacteria_gi_424531470-34960-48142 hallmark;refseq 22;16;4;2 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC4422 prophage linear Cluster_1 Gammaproteobacteria_gi_424533116 hallmark;refseq 18;17;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC4422 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_424536608 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC4013 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_424537448-575-28471 hallmark;vdb 24;8;10;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC4013 prophage linear Cluster_33 Gammaproteobacteria_gi_424538877-62263-75278 hallmark;refseq;vdb 14;9;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC4013 prophage linear Cluster_0 Gammaproteobacteria_gi_424538947-0-22946 hallmark;refseq 31;25;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC4013 prophage linear Cluster_0 Gammaproteobacteria_gi_424542528 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC4402 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_424543426-69-17416 hallmark;vdb 13;6;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC4402 prophage linear Cluster_33 Gammaproteobacteria_gi_424544860-51510-64406 hallmark;refseq;vdb 13;9;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC4402 prophage linear Cluster_0 Gammaproteobacteria_gi_424544919 hallmark;refseq 19;15;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC4402 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_424545313 refseq 16;13;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC4402 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_424548849 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC4439 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_424549718-583-29171 hallmark;vdb 26;8;12;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC4439 prophage linear Cluster_33 Gammaproteobacteria_gi_424549763 hallmark;refseq 22;16;4;2 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC4439 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_424551132-56313-81082 hallmark;refseq 30;24;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC4439 prophage linear Cluster_0 Gammaproteobacteria_gi_424555098 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC4436 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_424555944-245-29370 hallmark;vdb 28;9;13;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC4436 prophage linear Cluster_33 Gammaproteobacteria_gi_424557372-162-23831 hallmark;refseq 32;26;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC4436 prophage linear Cluster_0 Gammaproteobacteria_gi_424557768 hallmark;refseq 11;11;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC4436 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_424557801 refseq 43;38;1;4 Viruses;unclassified phages;unknown;unknown;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC4436 extrachromosomal linear Cluster_174 Gammaproteobacteria_gi_424561444 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC4437 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_424562285-0-29335 hallmark;vdb 29;8;15;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC4437 prophage linear Cluster_33 Gammaproteobacteria_gi_424563651-51870-64766 hallmark;refseq;vdb 13;9;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC4437 prophage linear Cluster_0 Gammaproteobacteria_gi_424563710-0-22615 hallmark;refseq 31;25;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC4437 prophage linear Cluster_0 Gammaproteobacteria_gi_424564115 hallmark;refseq 11;11;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC4437 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_424567483 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC4448 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_424568381-75-17624 hallmark 14;7;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC4448 prophage linear Cluster_33 Gammaproteobacteria_gi_424568417 hallmark;refseq 22;18;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC4448 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_424569831-162-23948 hallmark;refseq 32;26;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC4448 prophage linear Cluster_0 Gammaproteobacteria_gi_424573670 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1845 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_424574510-583-29239 hallmark;vdb 26;8;12;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1845 prophage linear Cluster_33 Gammaproteobacteria_gi_424575944-51570-64466 hallmark;refseq;vdb 13;9;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1845 prophage linear Cluster_0 Gammaproteobacteria_gi_424576001 hallmark;refseq 23;15;6;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1845 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_424579622 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1863 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_424581800-53616-66512 hallmark;refseq;vdb 13;9;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1863 prophage linear Cluster_0 Gammaproteobacteria_gi_424581859-0-22549 hallmark;refseq 31;25;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1863 prophage linear Cluster_0 Gammaproteobacteria_gi_424582243 hallmark;refseq 15;14;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1863 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_424586292-54385-57539 noncaudo 4;4;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae CP1030(3) prophage linear Cluster_12 Gammaproteobacteria_gi_424586336 refseq 4;4;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae CP1030(3) extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_424592449 hallmark;refseq 12;9;;3 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae CP1037(10) extrachromosomal circular Cluster_14 Gammaproteobacteria_gi_424594992-54265-58211 noncaudo 5;5;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae CP1040(13) prophage linear Cluster_12 Gammaproteobacteria_gi_424598901 refseq 3;3;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae CP1044(17) extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_424598904 refseq 7;7;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae CP1044(17) extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_424601632 refseq 3;3;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae CP1047(20) extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_424601635 refseq 7;7;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae CP1047(20) extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_424602384-3513-35755 hallmark;refseq 44;44;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae CP1047(20) prophage linear Cluster_97 Gammaproteobacteria_gi_424606591-52483-56436 noncaudo 5;5;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae CP1050(23) prophage linear Cluster_12 Gammaproteobacteria_gi_424610421-53090-57050 noncaudo 5;5;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-39A1 prophage linear Cluster_12 Gammaproteobacteria_gi_424610466 refseq 3;3;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-39A1 extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_424613226-54463-58423 noncaudo 5;5;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-41A1 prophage linear Cluster_12 Gammaproteobacteria_gi_424613274 refseq 3;3;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-41A1 extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_424617216-53512-57472 noncaudo 5;5;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-42A1 prophage linear Cluster_12 Gammaproteobacteria_gi_424617261 refseq 3;3;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-42A1 extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_424621991-54435-58395 noncaudo 5;5;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-47A1 prophage linear Cluster_12 Gammaproteobacteria_gi_424622037 refseq 3;3;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-47A1 extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_424627111 hallmark;refseq 12;11;;1 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-50A1 extrachromosomal linear Cluster_14 Gammaproteobacteria_gi_424630838 hallmark;refseq 11;11;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-51A1 extrachromosomal linear Cluster_14 Gammaproteobacteria_gi_424631731 hallmark;refseq 11;11;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-52A1 extrachromosomal linear Cluster_14 Gammaproteobacteria_gi_424634921 hallmark;refseq 11;11;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-55A1 extrachromosomal linear Cluster_14 Gammaproteobacteria_gi_424638728 hallmark;refseq 11;11;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-56A1 extrachromosomal linear Cluster_14 Gammaproteobacteria_gi_424644479-591211-595171 noncaudo 5;5;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-56A2 prophage linear Cluster_12 Gammaproteobacteria_gi_424645007 refseq 3;3;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-56A2 extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_424649857 hallmark;refseq 11;11;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-57A1 extrachromosomal linear Cluster_14 Gammaproteobacteria_gi_424652685-54413-58373 noncaudo 5;5;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-57A2 prophage linear Cluster_12 Gammaproteobacteria_gi_424652770 refseq 3;3;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-57A2 extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_424656062-591258-595218 noncaudo 5;5;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-81A2 prophage linear Cluster_12 Gammaproteobacteria_gi_424656593 refseq 3;3;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-81A2 extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_424666754-657783-677855 hallmark;refseq 26;17;1;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Stenotrophomonas Stenotrophomonas maltophilia Ab55555 prophage linear Cluster_0 Gammaproteobacteria_gi_424729484-246012-294129 hallmark;refseq 59;48;2;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Citrobacter Citrobacter sp. L17 prophage linear Cluster_1 Gammaproteobacteria_gi_424731324-241688-272248 hallmark;refseq 46;39;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Citrobacter Citrobacter sp. L17 prophage linear Cluster_4 Gammaproteobacteria_gi_424742214 hallmark;refseq 16;12;1;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii WC-141 extrachromosomal linear Cluster_24 Gammaproteobacteria_gi_424743695 hallmark;refseq 19;10;2;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii WC-141 extrachromosomal linear Cluster_24 Gammaproteobacteria_gi_424745106 hallmark;refseq 38;22;5;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii WC-141 extrachromosomal linear Cluster_38 Gammaproteobacteria_gi_424746566-4445-22498 refseq 27;23;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O26:H11 str. CFSAN001629 prophage linear Cluster_1 Gammaproteobacteria_gi_424747147 refseq 21;17;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O26:H11 str. CFSAN001629 extrachromosomal linear Cluster_477 Gammaproteobacteria_gi_424750655 refseq 18;11;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O26:H11 str. CFSAN001629 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_424752963-0-25910 hallmark;refseq 30;25;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O26:H11 str. CFSAN001629 prophage linear Cluster_11 Gammaproteobacteria_gi_424753501 refseq 19;17;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O26:H11 str. CFSAN001629 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_424759289 refseq 21;17;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O111:H11 str. CFSAN001630 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_424763262-115313-149534 hallmark;refseq;vdb 50;24;14;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O111:H11 str. CFSAN001630 prophage linear Cluster_3 Gammaproteobacteria_gi_424768427 hallmark;refseq 12;12;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O111:H8 str. CFSAN001632 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_424771373 refseq 23;16;7; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O111:H8 str. CFSAN001632 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_424771908 hallmark;refseq 15;14;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O111:H8 str. CFSAN001632 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_424773942-1990-12387 hallmark;refseq 11;9;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O111:H8 str. CFSAN001632 prophage linear Cluster_1 Gammaproteobacteria_gi_424773995 refseq 22;21;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O111:H8 str. CFSAN001632 extrachromosomal linear Cluster_11 Gammaproteobacteria_gi_424774232 hallmark;refseq 27;20;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O111:H8 str. CFSAN001632 extrachromosomal linear Cluster_11 Gammaproteobacteria_gi_424810601-94741-103331 refseq 11;10;1; Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio mimicus SX-4 prophage linear Cluster_12 Gammaproteobacteria_gi_424814860 hallmark;refseq 26;19;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Cronobacter Cronobacter sakazakii 696 extrachromosomal linear Cluster_54 Gammaproteobacteria_gi_424814883-3902409-3929790 hallmark;refseq 37;34;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia fergusonii ECD227 prophage linear Cluster_0 Gammaproteobacteria_gi_424814883-4160845-4176319 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia fergusonii ECD227 prophage linear Cluster_22 Gammaproteobacteria_gi_424814883-762787-793595 hallmark;refseq 46;41;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia fergusonii ECD227 prophage linear Cluster_3 Gammaproteobacteria_gi_424819845 hallmark 34;12;13;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Cronobacter Cronobacter sakazakii 696 extrachromosomal linear Cluster_28 Gammaproteobacteria_gi_424938860-1006479-1014538 noncaudo 10;8;;2 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa NCMG1179 prophage linear Cluster_13 Gammaproteobacteria_gi_425064754-759240-819141 hallmark;refseq 85;45;12;28 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Pasteurella Pasteurella multocida subsp. gallicida P1059 prophage linear Cluster_27 Gammaproteobacteria_gi_425074128-1755984-1790248 hallmark;refseq 38;29;6;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae WGLW1 prophage linear Cluster_0 Gammaproteobacteria_gi_425079304-1056216-1103078 hallmark;refseq;vdb 67;47;7;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae WGLW2 prophage linear Cluster_25 Gammaproteobacteria_gi_425084600-1944501-1978765 hallmark;refseq 38;29;6;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae WGLW3 prophage linear Cluster_0 Gammaproteobacteria_gi_425084600-4230163-4302681 hallmark;refseq;vdb 100;78;7;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae WGLW3 prophage linear unclustered Gammaproteobacteria_gi_425089767-2720807-2769840 hallmark;refseq 64;42;10;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae WGLW5 prophage linear Cluster_247 Gammaproteobacteria_gi_425094960-53510-86687 hallmark;refseq 42;29;2;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae WGLW5 prophage linear Cluster_0 Gammaproteobacteria_gi_425096297 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 3.4870 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_425098882 refseq 15;15;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 3.4870 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_425098900 hallmark;refseq 12;12;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 3.4870 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_425102433 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 5.2239 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_425103326 hallmark 18;5;6;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 5.2239 extrachromosomal circular Cluster_33 Gammaproteobacteria_gi_425108229 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 6.0172 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_425111078 refseq 14;14;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 6.0172 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_425111095 hallmark;refseq 19;19;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 6.0172 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_425114507 hallmark;refseq 20;12;4;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 8.0566 extrachromosomal linear Cluster_19 Gammaproteobacteria_gi_425116069-12969-36377 hallmark;refseq 34;28;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 8.0566 prophage linear Cluster_0 Gammaproteobacteria_gi_425119217 hallmark;refseq 21;13;4;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 8.0569 extrachromosomal linear Cluster_19 Gammaproteobacteria_gi_425120834-12977-36385 hallmark;refseq 34;28;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 8.0569 prophage linear Cluster_0 Gammaproteobacteria_gi_425124067 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 8.0586 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_425126981 refseq 13;13;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 8.0586 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_425126998 hallmark;refseq 11;11;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 8.0586 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_425128831 hallmark;refseq 39;36;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 8.0586 extrachromosomal linear Cluster_7 Gammaproteobacteria_gi_425130102 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 8.2524 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_425130908-233-29346 hallmark;vdb 28;9;13;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 8.2524 prophage linear Cluster_33 Gammaproteobacteria_gi_425132016 hallmark;refseq 28;19;5;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 8.2524 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_425132206-92393-105289 hallmark;refseq;vdb 13;9;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 8.2524 prophage linear Cluster_0 Gammaproteobacteria_gi_425132313-0-22613 hallmark;refseq 31;25;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 8.2524 prophage linear Cluster_0 Gammaproteobacteria_gi_425136458-4279-19220 hallmark;refseq 18;16;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 10.0833 prophage linear Cluster_2 Gammaproteobacteria_gi_425138633-85410-98306 hallmark;refseq;vdb 13;9;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 10.0833 prophage linear Cluster_0 Gammaproteobacteria_gi_425138726-0-22546 hallmark;refseq 31;25;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 10.0833 prophage linear Cluster_0 Gammaproteobacteria_gi_425143191 refseq 12;10;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 10.0869 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_425143405 hallmark 25;11;6;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 10.0869 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_425144313 hallmark;refseq 41;21;8;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 10.0869 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_425148649 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 88.0221 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_425150681-148-23817 hallmark;refseq 32;26;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 88.0221 prophage linear Cluster_0 Gammaproteobacteria_gi_425151094 hallmark;refseq 12;11;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 88.0221 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_425154264 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA34 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_425155401 hallmark 26;11;6;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA34 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_425156439 refseq 22;21;1; Viruses;unclassified phages;unknown;unknown;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA34 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_425156572-164-23833 hallmark;refseq 32;26;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA34 prophage linear Cluster_0 Gammaproteobacteria_gi_425156969 hallmark;refseq 13;13;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA34 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_425160716 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli FDA506 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_425161586-249-44013 hallmark;refseq 48;23;17;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli FDA506 prophage linear Cluster_33 Gammaproteobacteria_gi_425166239 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli FDA507 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_425167143-15936-30140 hallmark;refseq 21;7;9;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli FDA507 prophage linear Cluster_4 Gammaproteobacteria_gi_425167143-39413-61400 hallmark;refseq 29;23;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli FDA507 prophage linear Cluster_1 Gammaproteobacteria_gi_425168947 hallmark;refseq 17;17;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli FDA507 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_425172517 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli FDA504 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_425174777-1751-49783 hallmark;refseq;vdb 43;36;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli FDA504 prophage linear Cluster_0 Gammaproteobacteria_gi_425177625-63590-118163 hallmark;refseq 75;46;17;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli FRIK1999 prophage linear Cluster_3 Gammaproteobacteria_gi_425178418 hallmark;refseq 20;17;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli FRIK1999 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_425180733-90140-120974 hallmark;refseq 45;39;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli FRIK1999 prophage linear Cluster_0 Gammaproteobacteria_gi_425184556 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli FRIK1997 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_425185535 hallmark;refseq 33;26;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli FRIK1997 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_425187162 refseq 19;18;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli FRIK1997 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_425187184 hallmark;refseq 12;12;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli FRIK1997 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_425190072 hallmark;refseq 18;10;7;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli FRIK1997 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_425190682-850-19934 hallmark;refseq 24;24;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli NE1487 prophage linear Cluster_3 Gammaproteobacteria_gi_425191320 hallmark;refseq 20;17;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli NE1487 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_425191508-789-21958 hallmark;refseq 29;24;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli NE1487 prophage linear Cluster_0 Gammaproteobacteria_gi_425193794 refseq 21;20;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli NE1487 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_425197632 hallmark;refseq 18;15;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli NE037 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_425200167 refseq 19;17;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli NE037 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_425203678-0-20015 hallmark;refseq 26;25;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli FRIK2001 prophage linear Cluster_3 Gammaproteobacteria_gi_425204297 hallmark;refseq 20;17;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli FRIK2001 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_425204335-159306-188711 hallmark;refseq 40;32;7;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli FRIK2001 prophage linear Cluster_0 Gammaproteobacteria_gi_425205074 hallmark;refseq 61;30;17;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli FRIK2001 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_425205243-0-25484 hallmark 27;9;12;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli FRIK2001 prophage linear Cluster_33 Gammaproteobacteria_gi_425210049 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA4 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_425210907-0-35189 hallmark;refseq 43;14;22;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA4 prophage linear Cluster_4 Gammaproteobacteria_gi_425210907-44462-58340 hallmark;refseq 23;15;4;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA4 prophage linear Cluster_1 Gammaproteobacteria_gi_425212694 hallmark;refseq 26;26;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA4 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_425214523-69685-89718 hallmark;refseq 31;27;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA4 prophage linear Cluster_0 Gammaproteobacteria_gi_425216102 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA23 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_425216988 hallmark;refseq 69;30;29;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA23 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_425217071 hallmark;refseq 58;29;17;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA23 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_425218809 refseq 15;15;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA23 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_425218828 hallmark;refseq 12;12;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA23 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_425222676 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA49 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_425223578-15938-30142 hallmark;refseq 21;7;9;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA49 prophage linear Cluster_4 Gammaproteobacteria_gi_425223578-39415-53333 hallmark;refseq 23;15;4;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA49 prophage linear Cluster_1 Gammaproteobacteria_gi_425225337 refseq 13;13;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA49 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_425225355 hallmark;refseq 12;12;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA49 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_425228916 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA45 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_425230846-116949-152274 hallmark;refseq;vdb 48;24;13;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA45 prophage linear Cluster_3 Gammaproteobacteria_gi_425231490 refseq 16;15;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA45 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_425231509 hallmark;refseq 12;12;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA45 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_425235206 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TT12B extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_425240590-1-20008 hallmark;refseq 26;25;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MA6 prophage linear Cluster_3 Gammaproteobacteria_gi_425241208 hallmark;refseq 20;17;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MA6 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_425243486 refseq 22;21;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MA6 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_425246061 hallmark;refseq 23;21;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 5905 extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_425247334 hallmark;refseq 18;15;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 5905 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_425248397 hallmark;refseq 38;32;6; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 5905 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_425248905 hallmark;refseq 82;75;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 5905 extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_425249603-93871-124232 hallmark;refseq 43;36;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 5905 prophage linear Cluster_0 Gammaproteobacteria_gi_425250118 refseq 28;24;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 5905 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_425253068 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli CB7326 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_425253943 hallmark 19;5;7;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli CB7326 extrachromosomal circular Cluster_33 Gammaproteobacteria_gi_425255381 refseq 20;18;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli CB7326 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_425255599 refseq 21;19;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli CB7326 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_425260163-1091-25739 hallmark;refseq 27;13;9;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC96038 prophage linear Cluster_33 Gammaproteobacteria_gi_425260218 refseq 11;9;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC96038 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_425261451 hallmark;refseq 24;17;3;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC96038 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_425265499 hallmark;refseq 12;10;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 5412 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_425266350 hallmark;refseq 34;27;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 5412 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_425266647 hallmark;refseq 16;10;6; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 5412 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_425271477 refseq 18;11;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW15901 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_425271794 hallmark;refseq 22;15;7; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW15901 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_425273743-24789-51012 hallmark;refseq 31;25;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW15901 prophage linear Cluster_0 Gammaproteobacteria_gi_425275218-0-26571 hallmark;refseq 33;27;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW15901 prophage linear Cluster_0 Gammaproteobacteria_gi_425277022 refseq 24;10;7;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli ARS4.2123 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_425277421 hallmark;refseq 25;23;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli ARS4.2123 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_425278638-8941-38361 hallmark;refseq 40;19;13;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli ARS4.2123 prophage linear Cluster_28 Gammaproteobacteria_gi_425280764-49315-84693 hallmark;refseq 49;32;15;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli ARS4.2123 prophage linear Cluster_2 Gammaproteobacteria_gi_425282135 hallmark;refseq 24;16;6;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW00353 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_425283117 refseq 19;11;7;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW00353 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_425284288-24789-34808 hallmark;refseq 12;12;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW00353 prophage linear Cluster_0 Gammaproteobacteria_gi_425285792-850-11837 hallmark;refseq 13;13;; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW00353 prophage linear Cluster_0 Gammaproteobacteria_gi_425286418 hallmark;refseq 24;16;4;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW00353 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_425287251-5698-22273 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 3006 prophage linear Cluster_2 Gammaproteobacteria_gi_425287876-5322-19026 hallmark;refseq 16;16;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 3006 prophage linear Cluster_4 Gammaproteobacteria_gi_425287905 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 3006 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_425288038 hallmark;refseq 19;11;6;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 3006 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_425289002-45343-75432 hallmark;refseq 41;35;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 3006 prophage linear Cluster_0 Gammaproteobacteria_gi_425289286-79329-114624 hallmark;refseq 51;44;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 3006 prophage linear Cluster_3 Gammaproteobacteria_gi_425289431 hallmark;refseq 44;38;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 3006 extrachromosomal linear Cluster_81 Gammaproteobacteria_gi_425292296 hallmark;refseq 29;25;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA38 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_425292924 hallmark;refseq 23;17;6; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA38 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_425295153 refseq 20;18;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA38 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_425298956 hallmark;refseq 60;48;12; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 07798 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_425299344 hallmark;refseq 16;10;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 07798 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_425299628-29-37315 hallmark;refseq 51;45;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 07798 prophage linear Cluster_3 Gammaproteobacteria_gi_425299810 refseq 25;11;7;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 07798 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_425304685 hallmark;refseq 26;22;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli N1 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_425309658 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1735 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_425310464-466-29204 hallmark;vdb 26;8;12;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1735 prophage linear Cluster_33 Gammaproteobacteria_gi_425310799 hallmark 26;11;6;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1735 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_425311860-56420-79264 hallmark;refseq 28;23;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1735 prophage linear Cluster_0 Gammaproteobacteria_gi_425312309 hallmark;refseq 13;13;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1735 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_425312335 refseq 43;38;1;4 Viruses;unclassified phages;unknown;unknown;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1735 extrachromosomal linear Cluster_174 Gammaproteobacteria_gi_425315580 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1736 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_425316393-468-29915 hallmark;vdb 28;8;13;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1736 prophage linear Cluster_33 Gammaproteobacteria_gi_425316719 hallmark 26;11;6;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1736 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_425317865-160-23829 hallmark;refseq 32;26;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1736 prophage linear Cluster_0 Gammaproteobacteria_gi_425318251 hallmark;refseq 13;13;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1736 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_425318277 refseq 43;38;1;4 Viruses;unclassified phages;unknown;unknown;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1736 extrachromosomal linear Cluster_174 Gammaproteobacteria_gi_425321643 hallmark;refseq 22;16;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1737 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_425322498-621-29588 hallmark;vdb 29;8;14;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1737 prophage linear Cluster_33 Gammaproteobacteria_gi_425322832 hallmark 26;11;6;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1737 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_425323906-51697-64593 hallmark;refseq;vdb 13;9;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1737 prophage linear Cluster_0 Gammaproteobacteria_gi_425323966-0-22546 hallmark;refseq 31;25;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1737 prophage linear Cluster_0 Gammaproteobacteria_gi_425324357 hallmark;refseq 13;13;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1737 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_425324383 refseq 43;38;1;4 Viruses;unclassified phages;unknown;unknown;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1737 extrachromosomal linear Cluster_174 Gammaproteobacteria_gi_425327833 hallmark;refseq 24;18;6; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1846 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_425328693-0-31751 hallmark;vdb 29;8;14;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1846 prophage linear Cluster_33 Gammaproteobacteria_gi_425330175-56309-79043 hallmark;refseq 28;24;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1846 prophage linear Cluster_0 Gammaproteobacteria_gi_425330614 refseq 16;13;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1846 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_425334023 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1847 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_425336315-51533-64429 hallmark;refseq;vdb 13;9;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1847 prophage linear Cluster_0 Gammaproteobacteria_gi_425336374-0-22621 hallmark;refseq 31;25;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1847 prophage linear Cluster_0 Gammaproteobacteria_gi_425336777 refseq 16;13;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1847 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_425340437 hallmark;refseq 20;16;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1848 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_425341286-585-28468 hallmark;vdb 25;8;11;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1848 prophage linear Cluster_33 Gammaproteobacteria_gi_425341337 hallmark;refseq 31;25;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1848 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_425342801-166-24027 hallmark;refseq 33;26;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1848 prophage linear Cluster_0 Gammaproteobacteria_gi_425346314 hallmark;refseq 18;15;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1849 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_425347147-577-29000 hallmark;vdb 26;8;12;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1849 prophage linear Cluster_33 Gammaproteobacteria_gi_425348546-51900-64796 hallmark;refseq;vdb 13;9;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1849 prophage linear Cluster_0 Gammaproteobacteria_gi_425348605-0-22549 hallmark;refseq 31;25;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1849 prophage linear Cluster_0 Gammaproteobacteria_gi_425352540 hallmark;refseq 20;16;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1850 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_425353386-0-29182 hallmark;vdb 28;8;13;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1850 prophage linear Cluster_33 Gammaproteobacteria_gi_425353434 hallmark;refseq 22;20;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1850 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_425354841-53608-66579 hallmark;refseq;vdb 13;9;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1850 prophage linear Cluster_0 Gammaproteobacteria_gi_425354903-301-23248 hallmark;refseq 31;25;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1850 prophage linear Cluster_0 Gammaproteobacteria_gi_425358533 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1856 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_425359415 hallmark;refseq 31;25;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1856 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_425360874-170-24035 hallmark;refseq 33;26;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1856 prophage linear Cluster_0 Gammaproteobacteria_gi_425364645 hallmark;refseq 20;16;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1862 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_425365507-577-28692 hallmark;vdb 26;8;12;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1862 prophage linear Cluster_33 Gammaproteobacteria_gi_425366959-51155-64051 hallmark;refseq;vdb 13;9;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1862 prophage linear Cluster_0 Gammaproteobacteria_gi_425367017 hallmark;refseq 19;15;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1862 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_425371089 hallmark;refseq 18;15;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1864 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_425371927-243-28987 hallmark;vdb 26;8;12;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1864 prophage linear Cluster_33 Gammaproteobacteria_gi_425373332-63972-77058 hallmark;refseq;vdb 14;9;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1864 prophage linear Cluster_0 Gammaproteobacteria_gi_425373405-0-22623 hallmark;refseq 31;25;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1864 prophage linear Cluster_0 Gammaproteobacteria_gi_425373805 hallmark;refseq 15;15;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1864 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_425380132 refseq 21;13;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1865 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_425380449 hallmark;refseq 18;15;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1865 extrachromosomal linear Cluster_11 Gammaproteobacteria_gi_425380634-0-37357 hallmark;refseq 50;46;1;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1865 prophage linear Cluster_7 Gammaproteobacteria_gi_425382374 refseq 26;21;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1865 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_425383874 hallmark;refseq 24;18;6; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1866 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_425384739-583-28851 hallmark;vdb 25;8;11;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1866 prophage linear Cluster_33 Gammaproteobacteria_gi_425384784 hallmark;refseq 25;21;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1866 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_425386245-164-23833 hallmark;refseq 32;26;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1866 prophage linear Cluster_0 Gammaproteobacteria_gi_425386654 hallmark;refseq 15;15;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1866 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_425390572 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1868 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_425391437-247-28995 hallmark;vdb 26;8;12;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1868 prophage linear Cluster_33 Gammaproteobacteria_gi_425392917-40975-53871 hallmark;refseq;vdb 13;9;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1868 prophage linear Cluster_0 Gammaproteobacteria_gi_425392968-0-22734 hallmark;refseq 31;25;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1868 prophage linear Cluster_0 Gammaproteobacteria_gi_425393376 hallmark;refseq 16;15;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1868 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_425396689 hallmark;refseq 18;15;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1869 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_425397555-249-29029 hallmark;vdb 28;8;13;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1869 prophage linear Cluster_33 Gammaproteobacteria_gi_425399039-40977-53913 hallmark;refseq;vdb 13;9;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1869 prophage linear Cluster_0 Gammaproteobacteria_gi_425399092-301-23248 hallmark;refseq 31;25;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1869 prophage linear Cluster_0 Gammaproteobacteria_gi_425399473 hallmark;refseq 17;16;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1869 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_425399532 refseq 24;19;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1869 extrachromosomal linear Cluster_174 Gammaproteobacteria_gi_425402675 hallmark;refseq 22;16;6; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1870 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_425403535-579-28497 hallmark;vdb 25;8;11;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1870 prophage linear Cluster_33 Gammaproteobacteria_gi_425405091-40971-54067 hallmark;refseq;vdb 14;9;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1870 prophage linear Cluster_0 Gammaproteobacteria_gi_425405141-0-22623 hallmark;refseq 31;25;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1870 prophage linear Cluster_0 Gammaproteobacteria_gi_425405555 hallmark;refseq 12;12;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1870 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_425405616 refseq 24;19;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli EC1870 extrachromosomal linear Cluster_174 Gammaproteobacteria_gi_425409220 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli NE098 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_425410075 hallmark 22;7;8;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli NE098 extrachromosomal circular Cluster_4 Gammaproteobacteria_gi_425411984 refseq 13;13;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli NE098 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_425412001 hallmark;refseq 10;10;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli NE098 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_425414349 hallmark;refseq 30;15;13;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli FRIK523 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_425415500 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli FRIK523 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_425418261 refseq 16;16;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli FRIK523 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_425418281 hallmark;refseq 16;16;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli FRIK523 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_425421897 hallmark;refseq 44;33;9;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 0.1288 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_425422608 hallmark;refseq 33;25;7;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 0.1288 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_425426632 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 0.1304 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_425427540-249-21374 hallmark;vdb 27;8;13;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 0.1304 prophage linear Cluster_33 Gammaproteobacteria_gi_425429113 refseq 38;31;7; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 0.1304 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_425739195 hallmark;refseq 88;26;19;43 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii WC-487 extrachromosomal linear Cluster_66 Gammaproteobacteria_gi_425743627 hallmark;refseq 50;30;6;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii WC-323 extrachromosomal linear Cluster_24 Gammaproteobacteria_gi_425743680 hallmark;vdb 19;6;4;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii WC-323 extrachromosomal linear Cluster_38 Gammaproteobacteria_gi_425746942 refseq 19;13;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii WC-323 extrachromosomal linear Cluster_24 Gammaproteobacteria_gi_425747632 hallmark;refseq 57;36;7;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii WC-348 extrachromosomal linear Cluster_24 Gammaproteobacteria_gi_425752207 hallmark;refseq 21;17;1;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii Naval-113 extrachromosomal linear Cluster_24 Gammaproteobacteria_gi_425752300 hallmark;refseq 119;47;22;50 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii Naval-113 extrachromosomal circular Cluster_53 Gammaproteobacteria_gi_425752931 hallmark 32;13;9;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii Naval-113 extrachromosomal linear Cluster_28 Gammaproteobacteria_gi_425754763 refseq 15;9;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii Naval-113 extrachromosomal linear Cluster_267 Gammaproteobacteria_gi_425755274 hallmark;refseq 19;16;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii Naval-113 extrachromosomal linear Cluster_24 Gammaproteobacteria_gi_425896522-1514735-1552864 hallmark;refseq;vdb 42;28;10;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas chlororaphis subsp. aureofaciens 30-84 prophage linear Cluster_85 Gammaproteobacteria_gi_427425230 hallmark;refseq 32;16;9;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii WC-136 extrachromosomal linear Cluster_122 Gammaproteobacteria_gi_427426478-16379-43866 hallmark;refseq 37;21;7;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii WC-136 prophage linear Cluster_122 Gammaproteobacteria_gi_427803074-2506632-2544663 hallmark;refseq 56;47;5;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli chi7122 prophage linear Cluster_11 Gammaproteobacteria_gi_427803074-987619-1018941 hallmark;refseq 41;33;5;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli chi7122 prophage linear Cluster_0 Gammaproteobacteria_gi_427807674-966101-997629 hallmark;refseq 41;33;4;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli prophage linear Cluster_0 Gammaproteobacteria_gi_428148339 hallmark;refseq 35;16;6;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae ST512-K30BO extrachromosomal linear Cluster_19 Gammaproteobacteria_gi_428149153-14279-33133 hallmark;refseq 31;24;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae ST512-K30BO prophage linear Cluster_37 Gammaproteobacteria_gi_428151337-10236-53780 hallmark;refseq 59;44;6;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae ST512-K30BO prophage linear Cluster_25 Gammaproteobacteria_gi_428152426 hallmark 13;3;3;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae ST512-K30BO extrachromosomal linear Cluster_148 Gammaproteobacteria_gi_428152648 hallmark;refseq 35;26;3;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae ST512-K30BO extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_429058902 hallmark;refseq 31;17;11;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 97.0007 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_429061905 refseq 13;13;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 97.0007 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_429061937 hallmark;refseq 11;11;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 97.0007 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_429071916 hallmark;refseq 16;13;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 99.0678 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_429073698-39769-52279 hallmark;refseq;vdb 12;7;5; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 99.0678 prophage linear Cluster_0 Gammaproteobacteria_gi_429073748-312-23259 hallmark;refseq 31;25;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 99.0678 prophage linear Cluster_0 Gammaproteobacteria_gi_429077228 hallmark;refseq 20;16;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 99.0713 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_429079355 refseq 16;16;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 99.0713 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_429079372 hallmark;refseq 10;10;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 99.0713 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_429082710-3395-44749 hallmark;refseq 58;46;7;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Cronobacter Cronobacter condimenti 1330 prophage linear Cluster_3 Gammaproteobacteria_gi_429090711 hallmark;refseq 26;19;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Cronobacter Cronobacter dublinensis 1210 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_429090781 hallmark;refseq 41;21;12;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Cronobacter Cronobacter dublinensis 1210 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_429094643 hallmark;refseq 17;15;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Cronobacter Cronobacter dublinensis 1210 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_429095456-1943076-1978291 hallmark;refseq 52;39;7;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Cronobacter Cronobacter dublinensis 582 prophage linear Cluster_3 Gammaproteobacteria_gi_429100003-1878114-1918393 hallmark;refseq 52;44;;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Cronobacter Cronobacter turicensis 564 prophage linear Cluster_7 Gammaproteobacteria_gi_429104362-356045-415058 hallmark;refseq 100;65;9;26 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Cronobacter Cronobacter malonaticus 681 prophage linear Cluster_23 Gammaproteobacteria_gi_429119566 hallmark;refseq 19;15;1;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Cronobacter Cronobacter sakazakii 680 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_429120722-15556-46820 hallmark;refseq 43;34;3;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Cronobacter Cronobacter sakazakii 680 prophage linear Cluster_7 Gammaproteobacteria_gi_429122166-371-22495 refseq 39;22;5;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Cronobacter Cronobacter sakazakii 680 prophage linear Cluster_3 Gammaproteobacteria_gi_429331104 refseq 11;6;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas putida CSV86 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_429331750 refseq 32;15;3;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas putida CSV86 extrachromosomal linear Cluster_26 Gammaproteobacteria_gi_429771273-0-46246 hallmark;refseq 61;44;12;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 11-02030 prophage linear Cluster_1 Gammaproteobacteria_gi_429775084-25617-61888 hallmark;refseq 50;40;8;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 11-02030 prophage linear Cluster_1 Gammaproteobacteria_gi_429775387-17526-77922 hallmark;refseq 66;65;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 11-02030 prophage linear Cluster_5 Gammaproteobacteria_gi_429775808 refseq 25;13;9;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 11-02030 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_429775905-122896-182370 hallmark;refseq 70;52;8;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 11-02030 prophage linear Cluster_5 Gammaproteobacteria_gi_429777641-398491-435760 hallmark;refseq 37;33;;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 11-02033-1 prophage linear Cluster_5 Gammaproteobacteria_gi_429777641-43731-91134 hallmark;refseq 59;32;17;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 11-02033-1 prophage linear Cluster_1 Gammaproteobacteria_gi_429780270-25617-62047 hallmark;refseq 50;40;8;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 11-02033-1 prophage linear Cluster_1 Gammaproteobacteria_gi_429780710 hallmark;refseq 82;65;17; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 11-02033-1 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_429781203-0-46246 hallmark;refseq 58;42;12;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 11-02033-1 prophage linear Cluster_1 Gammaproteobacteria_gi_429781652-263430-310833 hallmark;refseq 59;32;17;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 11-02092 prophage linear Cluster_1 Gammaproteobacteria_gi_429781652-618190-677664 hallmark;refseq 70;52;8;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 11-02092 prophage linear Cluster_5 Gammaproteobacteria_gi_429784321-25617-61772 hallmark;refseq 50;40;8;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 11-02092 prophage linear Cluster_1 Gammaproteobacteria_gi_429784404-267981-328377 hallmark;refseq 71;70;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 11-02092 prophage linear Cluster_5 Gammaproteobacteria_gi_429784853-0-46246 hallmark;refseq 57;42;10;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 11-02092 prophage linear Cluster_1 Gammaproteobacteria_gi_429789658-25790-61959 hallmark;refseq 50;40;8;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 11-02093 prophage linear Cluster_1 Gammaproteobacteria_gi_429789741-267962-328358 hallmark;refseq 70;69;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 11-02093 prophage linear Cluster_5 Gammaproteobacteria_gi_429790097-152551-212025 hallmark;refseq 68;53;8;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 11-02093 prophage linear Cluster_5 Gammaproteobacteria_gi_429790834-0-46201 hallmark;refseq 59;43;11;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 11-02093 prophage linear Cluster_1 Gammaproteobacteria_gi_429793817-398250-457724 hallmark;refseq 71;54;8;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 11-02281 prophage linear Cluster_5 Gammaproteobacteria_gi_429793817-43490-90893 hallmark;refseq 60;32;17;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 11-02281 prophage linear Cluster_1 Gammaproteobacteria_gi_429795888-25617-61089 hallmark;refseq 50;40;8;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 11-02281 prophage linear Cluster_1 Gammaproteobacteria_gi_429795971-267962-328358 hallmark;refseq 71;70;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 11-02281 prophage linear Cluster_5 Gammaproteobacteria_gi_429796657-0-46246 hallmark;refseq 55;41;10;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 11-02281 prophage linear Cluster_1 Gammaproteobacteria_gi_429805448-25790-62169 hallmark;refseq 50;40;8;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 11-02913 prophage linear Cluster_1 Gammaproteobacteria_gi_429805527-271093-331489 hallmark;refseq 71;70;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 11-02913 prophage linear Cluster_5 Gammaproteobacteria_gi_429805986-311575-371049 hallmark;refseq 70;52;8;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 11-02913 prophage linear Cluster_5 Gammaproteobacteria_gi_429806550 hallmark;refseq 52;26;12;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 11-02913 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_429806772-0-46246 hallmark;refseq 59;43;12;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 11-02913 prophage linear Cluster_1 Gammaproteobacteria_gi_429809734-598198-634316 hallmark;refseq 53;40;10;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 11-03439 prophage linear Cluster_1 Gammaproteobacteria_gi_429810335-398390-457864 hallmark;refseq 70;52;8;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 11-03439 prophage linear Cluster_5 Gammaproteobacteria_gi_429810335-43630-91033 hallmark;refseq 59;32;17;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 11-03439 prophage linear Cluster_1 Gammaproteobacteria_gi_429811124-268013-328409 hallmark;refseq 71;70;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 11-03439 prophage linear Cluster_5 Gammaproteobacteria_gi_429811605-0-46246 hallmark;refseq 57;42;10;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 11-03439 prophage linear Cluster_1 Gammaproteobacteria_gi_429816017-152188-211662 hallmark;refseq 68;53;8;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 11-04080 prophage linear Cluster_5 Gammaproteobacteria_gi_429816395-25790-62196 hallmark;refseq 50;40;8;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 11-04080 prophage linear Cluster_1 Gammaproteobacteria_gi_429816474-271066-316438 hallmark;refseq 60;59;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 11-04080 prophage linear Cluster_5 Gammaproteobacteria_gi_429816773 refseq 10;10;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 11-04080 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_429817192-0-45555 hallmark;refseq 58;43;11;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 11-04080 prophage linear Cluster_1 Gammaproteobacteria_gi_429820705-152217-211691 hallmark;refseq 68;53;8;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 11-03943 prophage linear Cluster_5 Gammaproteobacteria_gi_429821605-25790-68273 hallmark;refseq 56;43;10;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 11-03943 prophage linear Cluster_1 Gammaproteobacteria_gi_429821809-132680-193076 hallmark;refseq 69;68;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 11-03943 prophage linear Cluster_5 Gammaproteobacteria_gi_429822403-0-45555 hallmark;refseq 59;42;12;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 11-03943 prophage linear Cluster_1 Gammaproteobacteria_gi_429843846-398362-457836 hallmark;refseq 70;54;8;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 11-02318 prophage linear Cluster_5 Gammaproteobacteria_gi_429843849-0-46246 hallmark;refseq 61;44;12;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 11-02318 prophage linear Cluster_1 Gammaproteobacteria_gi_429902689-7164-21563 hallmark;refseq 19;19;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 99.0672 prophage linear Cluster_3 Gammaproteobacteria_gi_429902720 hallmark;refseq 17;14;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 99.0672 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_429903126-65074-85116 hallmark;refseq 31;27;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 99.0672 prophage linear Cluster_0 Gammaproteobacteria_gi_429903268 hallmark;refseq 20;16;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 97.0010 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_429903684 refseq 13;13;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 97.0010 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_429903685 hallmark;refseq 11;11;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 97.0010 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_429903882-0-39721 hallmark;refseq 54;38;8;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. Ec11-9450 prophage linear Cluster_5 Gammaproteobacteria_gi_429903888-1115401-1157816 hallmark;refseq 58;43;10;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. Ec11-9450 prophage linear Cluster_1 Gammaproteobacteria_gi_429903888-1422692-1484082 hallmark;refseq 73;69;1;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. Ec11-9450 prophage linear Cluster_5 Gammaproteobacteria_gi_429903938-333431-392905 hallmark;refseq 73;55;8;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. Ec11-9990 prophage linear Cluster_5 Gammaproteobacteria_gi_429907235-374367-434763 hallmark;refseq 71;70;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. Ec11-9990 prophage linear Cluster_5 Gammaproteobacteria_gi_429907235-67015-109498 hallmark;refseq 56;43;10;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. Ec11-9990 prophage linear Cluster_1 Gammaproteobacteria_gi_429907941-0-31121 hallmark;refseq 43;31;9;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. Ec11-9941 prophage linear Cluster_1 Gammaproteobacteria_gi_429910951-1280545-1331623 hallmark;refseq 62;34;17;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. Ec11-9941 prophage linear Cluster_1 Gammaproteobacteria_gi_429910951-1640004-1699478 hallmark;refseq 73;55;9;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. Ec11-9941 prophage linear Cluster_5 Gammaproteobacteria_gi_429910951-597384-642722 hallmark;refseq 61;47;10;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. Ec11-9941 prophage linear Cluster_1 Gammaproteobacteria_gi_429910951-907732-968130 hallmark;refseq 72;70;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. Ec11-9941 prophage linear Cluster_5 Gammaproteobacteria_gi_429913413-357489-406336 hallmark;refseq 64;44;13;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. Ec11-4984 prophage linear Cluster_1 Gammaproteobacteria_gi_429916791-601239-643722 hallmark;refseq 57;43;10;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. Ec11-4984 prophage linear Cluster_1 Gammaproteobacteria_gi_429916791-908591-968921 hallmark;refseq 71;70;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. Ec11-4984 prophage linear Cluster_5 Gammaproteobacteria_gi_429921829-595646-638129 hallmark;refseq 56;43;10;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. Ec11-5604 prophage linear Cluster_1 Gammaproteobacteria_gi_429921829-903003-964927 hallmark;refseq 71;69;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. Ec11-5604 prophage linear Cluster_5 Gammaproteobacteria_gi_429923158-377821-437378 hallmark;refseq 70;67;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. Ec11-4986 prophage linear Cluster_5 Gammaproteobacteria_gi_429923158-69692-112175 hallmark;refseq 57;43;10;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. Ec11-4986 prophage linear Cluster_1 Gammaproteobacteria_gi_429923158-754028-801431 hallmark;refseq 59;32;17;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. Ec11-4986 prophage linear Cluster_1 Gammaproteobacteria_gi_429924242 hallmark;refseq 17;16;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. Ec11-4986 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_429924260-359401-409734 hallmark;refseq 66;46;14;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. Ec11-4986 prophage linear Cluster_1 Gammaproteobacteria_gi_429928206-351550-399918 hallmark;refseq 63;45;13;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. Ec11-4987 prophage linear Cluster_1 Gammaproteobacteria_gi_429932054-382395-442882 hallmark;refseq 70;67;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. Ec11-4987 prophage linear Cluster_5 Gammaproteobacteria_gi_429932054-75058-117541 hallmark;refseq 56;43;10;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. Ec11-4987 prophage linear Cluster_1 Gammaproteobacteria_gi_429932054-758028-804994 hallmark;refseq 59;31;17;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. Ec11-4987 prophage linear Cluster_1 Gammaproteobacteria_gi_429933215-1241979-1289382 hallmark;refseq 59;32;17;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. Ec11-4988 prophage linear Cluster_1 Gammaproteobacteria_gi_429933215-558687-601170 hallmark;refseq 56;43;10;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. Ec11-4988 prophage linear Cluster_1 Gammaproteobacteria_gi_429933215-866039-926435 hallmark;refseq 71;70;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. Ec11-4988 prophage linear Cluster_5 Gammaproteobacteria_gi_429938340-1145550-1188033 hallmark;refseq 57;43;10;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. Ec11-5603 prophage linear Cluster_1 Gammaproteobacteria_gi_429938340-1452902-1514083 hallmark;refseq 71;68;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. Ec11-5603 prophage linear Cluster_5 Gammaproteobacteria_gi_429938340-2184385-2243884 hallmark;refseq 73;55;8;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. Ec11-5603 prophage linear Cluster_5 Gammaproteobacteria_gi_429943481-0-41953 hallmark;refseq 56;41;11;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. Ec11-6006 prophage linear Cluster_1 Gammaproteobacteria_gi_429946478-1279816-1330436 hallmark;refseq 57;30;16;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. Ec11-6006 prophage linear Cluster_1 Gammaproteobacteria_gi_429946478-1637637-1699379 hallmark;refseq 70;52;8;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. Ec11-6006 prophage linear Cluster_5 Gammaproteobacteria_gi_429946478-598214-640697 hallmark;refseq 56;43;10;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. Ec11-6006 prophage linear Cluster_1 Gammaproteobacteria_gi_429946478-905566-963868 hallmark;refseq 69;68;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. Ec11-6006 prophage linear Cluster_5 Gammaproteobacteria_gi_429948620-1144646-1187933 hallmark;refseq 59;44;10;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. Ec12-0465 prophage linear Cluster_1 Gammaproteobacteria_gi_429948620-1452731-1513733 hallmark;refseq 69;67;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. Ec12-0465 prophage linear Cluster_5 Gammaproteobacteria_gi_429948620-1835356-1883984 hallmark;refseq 57;30;17;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. Ec12-0465 prophage linear Cluster_1 Gammaproteobacteria_gi_429948620-2194692-2254166 hallmark;refseq 70;54;8;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. Ec12-0465 prophage linear Cluster_5 Gammaproteobacteria_gi_429951087-1318-33871 hallmark;refseq 45;32;8;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. Ec12-0465 prophage linear Cluster_1 Gammaproteobacteria_gi_429953637-350561-410426 hallmark;refseq 72;56;8;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. Ec12-0466 prophage linear Cluster_5 Gammaproteobacteria_gi_429956884-1153485-1195968 hallmark;refseq 57;43;10;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. Ec12-0466 prophage linear Cluster_1 Gammaproteobacteria_gi_429956884-1460962-1526054 hallmark;refseq 67;65;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. Ec12-0466 prophage linear Cluster_5 Gammaproteobacteria_gi_429958839-25790-68445 hallmark;refseq 58;44;10;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 11-02318 prophage linear Cluster_1 Gammaproteobacteria_gi_429958839-333275-393671 hallmark;refseq 71;70;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. 11-02318 prophage linear Cluster_5 Gammaproteobacteria_gi_429958929 hallmark;refseq 21;18;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 88.1467 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_429959035-0-28381 hallmark 32;14;12;6 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 88.1467 prophage linear Cluster_33 Gammaproteobacteria_gi_429959217-90184-120868 hallmark;refseq 45;38;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 88.1467 prophage linear Cluster_0 Gammaproteobacteria_gi_429959229 hallmark;refseq 24;23;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 88.1467 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_429959293 hallmark;refseq 19;13;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 88.1467 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_429959403 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 88.1042 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_429959526 hallmark 22;7;8;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 88.1042 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_429959693 refseq 23;20;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 88.1042 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_429959808 hallmark;refseq 26;20;6; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 89.0511 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_429960114 refseq 13;13;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 89.0511 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_429960115 hallmark;refseq 12;12;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 89.0511 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_429960189 hallmark;refseq 53;24;14;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 90.0091 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_429960240 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 90.0091 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_429960703 hallmark;refseq 85;53;18;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 90.0039 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_429960728-4285-19210 hallmark;refseq 20;18;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 90.0039 prophage linear Cluster_2 Gammaproteobacteria_gi_429960824-248-28814 hallmark;refseq 33;15;12;6 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 90.0039 prophage linear Cluster_33 Gammaproteobacteria_gi_429960954-90189-121019 hallmark;refseq 46;38;5;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 90.0039 prophage linear Cluster_0 Gammaproteobacteria_gi_429960955 hallmark;refseq 26;17;7;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 90.0039 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_429961100 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 90.2281 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_429963695 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 93.0055 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_429966630 refseq 17;15;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 93.0055 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_429966631 hallmark;refseq 27;12;7;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 93.0055 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_429966794 hallmark;refseq 44;20;13;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 93.0055 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_429966818 hallmark;refseq 44;20;13;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 93.0056 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_429966867 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 93.0056 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_429967042 hallmark;refseq 19;9;5;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 93.0056 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_429967222 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 94.0618 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_429967480 hallmark;refseq 20;20;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 94.0618 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_429967582-4500-19215 hallmark;refseq 19;17;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 95.0183 prophage linear Cluster_2 Gammaproteobacteria_gi_429967698-0-28681 hallmark;refseq 34;16;12;6 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 95.0183 prophage linear Cluster_33 Gammaproteobacteria_gi_429967848-58158-88988 hallmark;refseq 46;39;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 95.0183 prophage linear Cluster_0 Gammaproteobacteria_gi_429967854 hallmark;refseq 26;25;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 95.0183 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_429967959 hallmark;refseq 24;17;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 95.0183 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_429968031 hallmark;refseq 25;20;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 95.1288 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_429968880 refseq 15;15;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 95.0943 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_429968881 hallmark;refseq 12;12;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 95.0943 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_429968896 hallmark;refseq 25;19;6; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 95.0943 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_429968983 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 96.0428 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_429969186-97079-127803 hallmark;refseq 46;38;5;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 96.0428 prophage linear Cluster_0 Gammaproteobacteria_gi_429969189 refseq 15;13;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 96.0428 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_429969300 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 96.0427 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_429969437 hallmark;refseq 17;13;3;1 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 96.0427 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_429969649 refseq 16;16;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 96.0427 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_429969650 hallmark;refseq 12;12;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 96.0427 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_429969763-0-19843 hallmark;refseq 26;25;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 96.0939 prophage linear Cluster_3 Gammaproteobacteria_gi_430006946 hallmark;refseq 20;17;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 96.0939 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_430007049 hallmark;vdb 29;7;16;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 96.0939 extrachromosomal linear Cluster_33 Gammaproteobacteria_gi_430008585 refseq 21;20;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 96.0939 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_430008624-98866-128870 hallmark;refseq 34;33;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 96.0939 prophage linear Cluster_7 Gammaproteobacteria_gi_430008684-888-19389 hallmark;refseq 23;23;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 96.0932 prophage linear Cluster_3 Gammaproteobacteria_gi_430008823 refseq 12;9;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 96.0932 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_430024111-1334-11670 hallmark;refseq 11;7;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 96.0109 prophage linear Cluster_3 Gammaproteobacteria_gi_430024113 hallmark;refseq 28;14;4;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 96.0109 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_430024195 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 96.0109 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_430024572 hallmark;refseq 12;12;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 96.0109 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_430024711 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 96.0107 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_430025069 hallmark;refseq 10;8;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 97.1742 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_430025182 refseq 21;21;; Viruses;unclassified phages;unknown;unknown;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 97.1742 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_430025192-0-22650 hallmark;refseq 31;25;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 97.1742 prophage linear Cluster_0 Gammaproteobacteria_gi_430025215 hallmark;refseq 10;10;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 97.1742 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_430025680 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 97.0003 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_430025731 hallmark;refseq 13;8;3;2 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 97.0003 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_430025750 refseq 15;15;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 97.0003 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_430376811-834383-865618 hallmark;refseq 38;20;5;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Moraxella Moraxella macacae 0408225 prophage linear Cluster_4 Gammaproteobacteria_gi_433018490-0-15370 hallmark;refseq 19;15;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE105 prophage linear Cluster_2 Gammaproteobacteria_gi_433019103-14007-46643 hallmark;refseq 42;33;5;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE105 prophage linear Cluster_0 Gammaproteobacteria_gi_433022547-27600-54028 hallmark;refseq 44;41;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE106 prophage linear Cluster_11 Gammaproteobacteria_gi_433026590 noncaudo 13;3;2;8 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE106 extrachromosomal circular Cluster_51 Gammaproteobacteria_gi_433027863-69-11276 hallmark;refseq 10;8;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE109 prophage linear Cluster_0 Gammaproteobacteria_gi_433031329 hallmark;refseq 11;7;;4 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE109 extrachromosomal circular Cluster_36 Gammaproteobacteria_gi_433031378 refseq 17;10;3;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE112 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_433032008 hallmark;refseq 12;10;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE112 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_433032995 hallmark;refseq 18;12;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE112 extrachromosomal linear Cluster_26 Gammaproteobacteria_gi_433033188 hallmark;refseq 18;12;6; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE112 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_433033207 hallmark 20;8;10;2 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE112 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_433033643 hallmark;refseq 44;26;2;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE112 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_433033864-14815-46161 hallmark;refseq 41;34;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE112 prophage linear Cluster_0 Gammaproteobacteria_gi_433036633-0-10372 hallmark;refseq 12;9;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE112 prophage linear Cluster_3 Gammaproteobacteria_gi_433037467 hallmark;refseq;vdb 42;25;13;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE113 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_433037704 hallmark;refseq 55;47;6;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE113 extrachromosomal linear Cluster_11 Gammaproteobacteria_gi_433039464-0-35173 hallmark;refseq 45;38;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE113 prophage linear Cluster_7 Gammaproteobacteria_gi_433042033 hallmark;refseq 39;22;13;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE117 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_433042864 hallmark;refseq 26;17;4;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE117 extrachromosomal linear Cluster_26 Gammaproteobacteria_gi_433042889 hallmark;refseq 44;24;11;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE117 extrachromosomal circular Cluster_0 Gammaproteobacteria_gi_433043119-767-14482 hallmark;refseq 15;13;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE117 prophage linear Cluster_2 Gammaproteobacteria_gi_433057883-0-14641 hallmark;refseq 17;14;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE124 prophage linear Cluster_2 Gammaproteobacteria_gi_433070238-42842-76009 hallmark;refseq 42;35;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE128 prophage linear Cluster_0 Gammaproteobacteria_gi_433071603 hallmark;refseq 14;12;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE129 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_433072595 hallmark;refseq 17;13;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE129 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_433075212-11925-44687 hallmark;refseq 42;37;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE129 prophage linear Cluster_0 Gammaproteobacteria_gi_433075673 refseq 18;12;1;5 Viruses;unclassified;unclassified;unclassified;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE129 extrachromosomal linear Cluster_37 Gammaproteobacteria_gi_433075969 refseq 17;11;1;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE129 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_433080660-71359-104666 hallmark;refseq 42;34;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE131 prophage linear Cluster_2 Gammaproteobacteria_gi_433080805 hallmark;noncaudo 8;4;;4 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE131 extrachromosomal linear Cluster_36 Gammaproteobacteria_gi_433080840 hallmark;refseq 6;4;;2 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE131 extrachromosomal linear Cluster_36 Gammaproteobacteria_gi_433085530 noncaudo 11;3;2;6 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE133 extrachromosomal circular Cluster_51 Gammaproteobacteria_gi_433086130 refseq 26;19;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE137 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_433087560 refseq 25;14;8;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE137 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_433087712-491712-525105 hallmark;refseq 41;35;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE137 prophage linear Cluster_7 Gammaproteobacteria_gi_433090867 hallmark;refseq 21;19;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE138 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_433091531 hallmark;refseq 33;29;;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE138 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_433091571-6777-31503 hallmark;refseq 34;29;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE138 prophage linear Cluster_0 Gammaproteobacteria_gi_433091770 hallmark;refseq 24;17;2;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE138 extrachromosomal linear Cluster_26 Gammaproteobacteria_gi_433092962-22874-33056 hallmark;refseq 10;8;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE138 prophage linear Cluster_0 Gammaproteobacteria_gi_433095390 hallmark;refseq 52;33;16;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE139 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_433104101 hallmark;refseq 10;7;1;2 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE145 extrachromosomal circular Cluster_36 Gammaproteobacteria_gi_433109411-32517-70849 hallmark;refseq 52;46;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE150 prophage linear Cluster_3 Gammaproteobacteria_gi_433109774-206-43304 hallmark;refseq 54;39;12;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE150 prophage circular Cluster_1 Gammaproteobacteria_gi_433110637 hallmark;refseq 44;37;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE150 extrachromosomal linear Cluster_11 Gammaproteobacteria_gi_433113787 hallmark;refseq 25;23;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE150 extrachromosomal linear Cluster_7 Gammaproteobacteria_gi_433119079 refseq 18;13;5; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE157 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_433119109 hallmark;refseq 18;11;7; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE157 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_433122542-11960-45241 hallmark;refseq 41;34;3;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE157 prophage linear Cluster_0 Gammaproteobacteria_gi_433124184 hallmark;refseq 38;26;10;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE160 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_433125026-684-15119 hallmark;refseq 17;14;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE160 prophage linear Cluster_2 Gammaproteobacteria_gi_433128902 hallmark;refseq 20;17;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE163 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_433129735 hallmark;refseq 22;16;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE163 extrachromosomal linear Cluster_26 Gammaproteobacteria_gi_433129953-254-14674 hallmark;refseq 17;14;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE163 prophage linear Cluster_2 Gammaproteobacteria_gi_433129985 hallmark;refseq 102;90;2;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE163 extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_433133686 hallmark;refseq 47;37;10; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE166 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_433134765-370-11101 hallmark;refseq 14;12;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE166 prophage linear Cluster_2 Gammaproteobacteria_gi_433143095 refseq 27;20;3;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE168 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_433144910-161430-195141 hallmark;refseq 40;35;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE168 prophage linear Cluster_7 Gammaproteobacteria_gi_433147199 noncaudo 12;3;1;8 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE168 extrachromosomal circular Cluster_51 Gammaproteobacteria_gi_433148633 hallmark;refseq 38;26;10;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE174 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_433149034-494-14929 hallmark;refseq 17;14;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE174 prophage linear Cluster_2 Gammaproteobacteria_gi_433156064-56581-77958 hallmark;refseq 31;27;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE176 prophage linear Cluster_0 Gammaproteobacteria_gi_433158564-0-15088 hallmark;refseq 17;14;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE177 prophage linear Cluster_2 Gammaproteobacteria_gi_433161480 hallmark;refseq 23;21;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE177 extrachromosomal linear Cluster_7 Gammaproteobacteria_gi_433162347 refseq 19;14;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE179 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_433163862-70753-103533 hallmark;refseq 39;33;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE179 prophage linear Cluster_0 Gammaproteobacteria_gi_433167347 hallmark;refseq 19;14;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE180 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_433167682-58-11265 hallmark;refseq 10;8;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE180 prophage linear Cluster_0 Gammaproteobacteria_gi_433168015 hallmark;refseq 31;27;;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE180 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_433168947-92572-123742 hallmark;refseq 39;34;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE180 prophage linear Cluster_0 Gammaproteobacteria_gi_433171613 hallmark;refseq 24;15;5;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE180 extrachromosomal linear Cluster_11 Gammaproteobacteria_gi_433171638 hallmark;refseq 27;22;;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE180 extrachromosomal linear Cluster_7 Gammaproteobacteria_gi_433172000-22225-54307 hallmark;refseq 46;38;5;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE232 prophage linear Cluster_3 Gammaproteobacteria_gi_433173374-147-19961 hallmark;refseq 21;19;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE232 prophage linear Cluster_1 Gammaproteobacteria_gi_433175741-67077-89301 hallmark;refseq 32;27;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE232 prophage linear Cluster_0 Gammaproteobacteria_gi_433178084-0-14541 hallmark;refseq 18;15;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE82 prophage linear Cluster_2 Gammaproteobacteria_gi_433178107 hallmark;refseq 16;12;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE82 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_433178129 hallmark;refseq 26;18;6;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE82 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_433178711 hallmark;refseq 74;31;3;40 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE82 extrachromosomal linear Cluster_23 Gammaproteobacteria_gi_433178892-14002-45704 hallmark;refseq 40;33;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE82 prophage linear Cluster_0 Gammaproteobacteria_gi_433186967-14863-49149 hallmark;refseq 55;44;4;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE88 prophage linear Cluster_3 Gammaproteobacteria_gi_433189330-22741-32924 hallmark;refseq 10;8;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE88 prophage linear Cluster_0 Gammaproteobacteria_gi_433192430-35238-52248 hallmark;refseq 27;21;6; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE90 prophage linear Cluster_1 Gammaproteobacteria_gi_433192688-25634-44219 hallmark;refseq 25;21;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE90 prophage linear Cluster_11 Gammaproteobacteria_gi_433194093-45797-77617 hallmark;refseq 39;33;6; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE90 prophage linear Cluster_0 Gammaproteobacteria_gi_433196423 hallmark 17;4;;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE90 extrachromosomal circular unclustered Gammaproteobacteria_gi_433201992 hallmark;refseq 53;42;4;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE95 extrachromosomal linear Cluster_11 Gammaproteobacteria_gi_433202715 hallmark;refseq 18;14;1;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE95 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_433203020 hallmark;refseq 26;16;9;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE95 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_433203048-121-29880 hallmark;refseq 38;27;8;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE95 prophage linear Cluster_1 Gammaproteobacteria_gi_433203654-14008-47680 hallmark;refseq 39;33;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE95 prophage linear Cluster_0 Gammaproteobacteria_gi_433204062-62085-92294 hallmark;refseq 35;34;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE95 prophage linear Cluster_7 Gammaproteobacteria_gi_433204260-12869-34874 hallmark;refseq 35;28;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE95 prophage linear Cluster_0 Gammaproteobacteria_gi_433206676 refseq 29;25;1;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE97 extrachromosomal linear Cluster_261 Gammaproteobacteria_gi_433207630-566-14936 hallmark;refseq 16;14;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE97 prophage linear Cluster_2 Gammaproteobacteria_gi_433210073-11997-44207 hallmark;refseq 43;33;5;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE97 prophage linear Cluster_0 Gammaproteobacteria_gi_433215478 noncaudo 12;3;1;8 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE99 extrachromosomal circular Cluster_51 Gammaproteobacteria_gi_433551628-29712-53227 hallmark;refseq 23;16;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia enterocolitica IP 10393 prophage linear Cluster_0 Gammaproteobacteria_gi_433676172 hallmark;noncaudo 16;3;;13 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas translucens pv. translucens DSM 18974 extrachromosomal linear Cluster_153 Gammaproteobacteria_gi_436594525 refseq 15;10;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. 22704 extrachromosomal linear Cluster_47 Gammaproteobacteria_gi_436611112 hallmark;refseq 11;10;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. 22704 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_436745674 refseq 11;7;;4 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. SE30663 extrachromosomal linear Cluster_224 Gammaproteobacteria_gi_436796677 hallmark;refseq 48;39;5;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. CHS44 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_437118233-0-18172 hallmark;refseq 23;22;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. 607308-16 prophage linear Cluster_0 Gammaproteobacteria_gi_437320589 hallmark;refseq 24;21;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. 17927 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_437322906-12459-35481 hallmark;refseq 34;27;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. 17927 prophage linear Cluster_296 Gammaproteobacteria_gi_437339959 hallmark;refseq 22;18;1;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. CHS4 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_437364004 refseq 19;12;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. 22558 extrachromosomal linear Cluster_224 Gammaproteobacteria_gi_437376149 refseq 13;8;4;1 Viruses;unclassified phages;unknown;unknown;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. 22558 extrachromosomal linear Cluster_224 Gammaproteobacteria_gi_437420979-0-12666 hallmark;refseq 12;12;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. 543463 22-17 prophage linear Cluster_0 Gammaproteobacteria_gi_437443216-63-12729 hallmark;refseq 12;12;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. 543463 40-18 prophage linear Cluster_0 Gammaproteobacteria_gi_437489419 hallmark;refseq 20;19;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. 642046 4-7 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_437490319 refseq 26;17;6;3 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. 642046 4-7 extrachromosomal linear Cluster_47 Gammaproteobacteria_gi_437496777 refseq 16;16;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. 642046 4-7 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_437542119-42822-64068 hallmark;refseq 26;25;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. 648899 3-17 prophage linear Cluster_0 Gammaproteobacteria_gi_437670539 refseq 34;21;9;4 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. 642044 8-1 extrachromosomal linear Cluster_224 Gammaproteobacteria_gi_437677958-42826-65298 hallmark;refseq 28;26;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. 642044 8-1 prophage linear Cluster_0 Gammaproteobacteria_gi_437715891-23-18202 hallmark;refseq 22;22;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. 543463 42-20 prophage linear Cluster_0 Gammaproteobacteria_gi_437792125 hallmark;refseq 16;15;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. 76-2651 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_437832922 hallmark;refseq 66;50;3;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. SARB17 extrachromosomal linear Cluster_25 Gammaproteobacteria_gi_437842373 hallmark;refseq 20;10;4;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. SARB17 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_438050179 refseq 13;7;3;3 Viruses;unclassified;unclassified;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. 50-5646 extrachromosomal linear Cluster_428 Gammaproteobacteria_gi_438092469 hallmark;refseq 13;7;;6 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. 81-2625 extrachromosomal linear Cluster_36 Gammaproteobacteria_gi_438104521-42822-54306 hallmark;refseq 10;10;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. 62-1976 prophage linear Cluster_0 Gammaproteobacteria_gi_438148078-0-46833 hallmark;refseq 55;36;15;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Pullorum str. ATCC 9120 prophage linear Cluster_0 Gammaproteobacteria_gi_440285501-2544032-2595326 hallmark;refseq 74;54;9;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;unknown Enterobacteriaceae bacterium strain FGI 57 prophage linear Cluster_18 Gammaproteobacteria_gi_440709707 refseq 7;7;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae 4260B extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_440710378-2413-34655 hallmark;refseq 44;44;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae 4260B prophage linear Cluster_97 Gammaproteobacteria_gi_440760643 hallmark;refseq 22;14;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Pantoea Pantoea agglomerans 299R extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_440762344 hallmark;refseq 30;18;10;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. SH11G1113 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_440763271-51920-65653 hallmark;refseq 16;13;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. SH11G1113 prophage linear Cluster_22 Gammaproteobacteria_gi_440765976-28223-50789 hallmark;refseq 28;17;8;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. SH08SF124 prophage linear Cluster_0 Gammaproteobacteria_gi_440766032 refseq 17;13;1;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. SH08SF124 extrachromosomal linear Cluster_23 Gammaproteobacteria_gi_440766408 hallmark;refseq 16;16;; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. SH08SF124 extrachromosomal linear Cluster_23 Gammaproteobacteria_gi_440768409-48910-81962 hallmark;refseq 43;38;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. SH08SF124 prophage linear Cluster_0 Gammaproteobacteria_gi_440768940-27350-53475 hallmark;refseq;vdb 35;29;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. SH08SF124 prophage linear Cluster_0 Gammaproteobacteria_gi_440770364-46772-72586 hallmark;refseq 44;40;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. SH08SF124 prophage linear Cluster_23 Gammaproteobacteria_gi_441503707-69250-98562 hallmark;refseq 29;14;4;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Photobacterium Photobacterium sp. AK15 prophage linear Cluster_248 Gammaproteobacteria_gi_441503890-261989-272465 hallmark;refseq 14;7;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Photobacterium Photobacterium sp. AK15 prophage linear Cluster_14 Gammaproteobacteria_gi_441503890-337599-375746 hallmark;refseq 48;23;8;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Photobacterium Photobacterium sp. AK15 prophage linear Cluster_3 Gammaproteobacteria_gi_442590383 hallmark;refseq 17;15;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O10:K5(L):H4 str. ATCC 23506 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_442590405 refseq 70;64;1;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O10:K5(L):H4 str. ATCC 23506 extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_442593497 hallmark;refseq 27;26;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O10:K5(L):H4 str. ATCC 23506 extrachromosomal linear Cluster_353 Gammaproteobacteria_gi_442595183 refseq 16;13;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O10:K5(L):H4 str. ATCC 23506 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_442595421 hallmark;refseq 15;11;1;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O10:K5(L):H4 str. ATCC 23506 extrachromosomal linear Cluster_26 Gammaproteobacteria_gi_442604190-346354-389714 hallmark;refseq 57;45;4;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli Nissle 1917 prophage linear Cluster_2 Gammaproteobacteria_gi_442857396-1871636-1920206 hallmark;refseq;vdb 60;32;11;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Providencia Providencia alcalifaciens Dmel2 prophage linear Cluster_4 Gammaproteobacteria_gi_443473364-103211-113447 noncaudo 15;6;2;7 Viruses;unclassified;unclassified;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas pseudoalcaligenes KF707 prophage linear Cluster_13 Gammaproteobacteria_gi_443530711-797738-808822 noncaudo 16;10;3;3 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-7A1 prophage linear Cluster_12 Gammaproteobacteria_gi_443538061-798002-808713 noncaudo 16;9;4;3 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-81A1 prophage linear Cluster_12 Gammaproteobacteria_gi_443615330-1706424-1737745 hallmark;refseq 41;33;5;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli APEC O78 prophage linear Cluster_0 Gammaproteobacteria_gi_444349449 noncaudo 12;4;1;7 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Aggregatibacter Aggregatibacter actinomycetemcomitans serotype b str. S23A extrachromosomal linear Cluster_302 Gammaproteobacteria_gi_444350194-608268-642569 hallmark;refseq 44;30;3;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Enterobacter Enterobacter aerogenes EA1509E prophage linear Cluster_63 Gammaproteobacteria_gi_444425975-44601-50919 noncaudo 10;6;;4 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio campbellii CAIM 519 = NBRC 15631 prophage linear Cluster_14 Gammaproteobacteria_gi_444429050-172394-185684 hallmark;refseq 19;15;1;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas fluorescens BRIP34879 prophage linear Cluster_85 Gammaproteobacteria_gi_444434353 hallmark 109;17;60;32 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae BRIP39023 extrachromosomal linear Cluster_415 Gammaproteobacteria_gi_444928828 hallmark;refseq 20;15;5; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 99.0814 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_444929473 hallmark;refseq 17;14;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 99.0814 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_444930146 hallmark;refseq 16;14;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 99.0814 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_444931017 hallmark;refseq 14;9;3;2 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 99.0814 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_444931207-42459-52555 hallmark;refseq 10;9;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 99.0814 prophage linear Cluster_0 Gammaproteobacteria_gi_444934762 hallmark;refseq 20;17;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 99.0815 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_444936589 hallmark;refseq 21;16;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 99.0815 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_444940358 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 99.0816 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_444941062 hallmark;refseq 16;14;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 99.0816 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_444946586-8694-16492 hallmark;vdb 14;4;7;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 99.0839 prophage linear Cluster_33 Gammaproteobacteria_gi_444947714 hallmark;refseq 17;16;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 99.0839 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_444947824-9450-22346 hallmark;refseq;vdb 13;9;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 99.0839 prophage linear Cluster_0 Gammaproteobacteria_gi_444947846-506-23453 hallmark;refseq 31;25;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 99.0839 prophage linear Cluster_0 Gammaproteobacteria_gi_444951506 hallmark;refseq 20;17;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 99.0848 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_444953308-39898-51697 hallmark;refseq;vdb 11;7;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 99.0848 prophage linear Cluster_0 Gammaproteobacteria_gi_444953355 hallmark;refseq 20;15;5; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 99.0848 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_444956978 hallmark;refseq 21;18;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 99.1753 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_444959202 refseq 13;13;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 99.1753 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_444959239 hallmark;refseq 10;10;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 99.1753 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_444964313 refseq 8;7;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 99.1775 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_444967987 hallmark;refseq 17;14;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 99.1793 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_444969835 refseq 21;20;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 99.1793 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_444969934 hallmark;refseq 26;24;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 99.1793 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_444970030 refseq 26;24;1;1 Viruses;unclassified phages;unknown;unknown;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 99.1793 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_444970352 hallmark;refseq 10;10;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 99.1793 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_444973489 hallmark;refseq 17;15;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 99.1805 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_444975239-11611-21753 hallmark;refseq 10;8;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 99.1805 prophage linear Cluster_0 Gammaproteobacteria_gi_444975260 hallmark;refseq 21;16;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 99.1805 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_444975612 hallmark;refseq 12;12;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 99.1805 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_444975626 refseq 18;17;1; Viruses;unclassified phages;unknown;unknown;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 99.1805 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_444978440 hallmark;refseq 23;22;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli ATCC 700728 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_444979670 hallmark;refseq 15;14;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli ATCC 700728 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_444982708-71192-92830 hallmark;refseq 29;25;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli ATCC 700728 prophage linear Cluster_0 Gammaproteobacteria_gi_444984317 hallmark;refseq 14;13;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA11 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_444986455 refseq 15;15;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA11 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_444986473 hallmark;refseq 11;11;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA11 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_444989565 hallmark;refseq 20;17;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA19 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_444990268 hallmark;refseq 14;13;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA19 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_444991312-41013-52746 hallmark;refseq;vdb 11;7;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA19 prophage linear Cluster_0 Gammaproteobacteria_gi_444994335-780-10883 hallmark;refseq 10;9;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA13 prophage linear Cluster_0 Gammaproteobacteria_gi_444994917 hallmark;refseq 18;15;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA13 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_444996343 hallmark;refseq 14;8;4;2 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA13 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_444996569-503-23450 hallmark;refseq 31;25;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA13 prophage linear Cluster_0 Gammaproteobacteria_gi_444997039 hallmark;refseq 11;11;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA13 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_445000423 hallmark;refseq 20;17;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA2 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_445001135 hallmark;refseq 15;14;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA2 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_445001940 hallmark;refseq 20;13;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA2 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_445002158-39891-51630 hallmark;refseq;vdb 11;7;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA2 prophage linear Cluster_0 Gammaproteobacteria_gi_445002206-0-22006 hallmark;refseq 31;25;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA2 prophage linear Cluster_0 Gammaproteobacteria_gi_445002306 refseq 26;25;1; Viruses;unclassified phages;unknown;unknown;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA2 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_445002658 hallmark;refseq 15;14;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA2 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_445004944 hallmark;refseq 21;14;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA47 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_445005884 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA47 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_445006566 hallmark;refseq 14;13;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA47 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_445007693-9449-22345 hallmark;refseq;vdb 13;9;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA47 prophage linear Cluster_0 Gammaproteobacteria_gi_445007716-87-21838 hallmark;refseq 30;24;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA47 prophage linear Cluster_0 Gammaproteobacteria_gi_445012701 refseq 20;14;1;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA48 extrachromosomal linear Cluster_37 Gammaproteobacteria_gi_445014916 refseq 23;20;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA48 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_445016825 hallmark;refseq 20;16;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA8 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_445017384 hallmark;vdb 20;5;11;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA8 extrachromosomal linear Cluster_33 Gammaproteobacteria_gi_445017413 hallmark;refseq 16;14;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA8 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_445018261 hallmark;refseq 13;8;3;2 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA8 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_445018500-511-23458 hallmark;refseq 31;25;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA8 prophage linear Cluster_0 Gammaproteobacteria_gi_445018598 refseq 26;25;1; Viruses;unclassified phages;unknown;unknown;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA8 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_445019002 hallmark;refseq 19;18;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA8 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_445021209-0-35194 hallmark;refseq;vdb 48;23;13;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 7.1982 prophage linear Cluster_3 Gammaproteobacteria_gi_445022984 hallmark;refseq 19;17;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 7.1982 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_445023175 hallmark;refseq 14;8;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 7.1982 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_445027522 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 99.1781 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_445028139 hallmark;refseq 33;26;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 99.1781 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_445029764 refseq 14;14;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 99.1781 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_445029810 hallmark;refseq 10;10;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 99.1781 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_445033019 hallmark;refseq 18;16;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 99.1762 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_445033897 hallmark;refseq 14;8;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 99.1762 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_445034809-15336-21184 hallmark;refseq 6;6;; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 99.1762 prophage linear Cluster_0 Gammaproteobacteria_gi_445034829-828-24497 hallmark;refseq 32;26;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 99.1762 prophage linear Cluster_0 Gammaproteobacteria_gi_445035244 hallmark;refseq 13;13;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 99.1762 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_445035262 refseq 26;25;1; Viruses;unclassified phages;unknown;unknown;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 99.1762 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_445038712 hallmark;refseq 20;17;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA35 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_445039425 hallmark;refseq 16;14;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA35 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_445040456-40650-52389 hallmark;refseq;vdb 11;7;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA35 prophage linear Cluster_0 Gammaproteobacteria_gi_445040505-822-24491 hallmark;refseq 32;26;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PA35 prophage linear Cluster_0 Gammaproteobacteria_gi_445043325 hallmark;refseq 28;25;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 3.4880 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_445044016 hallmark;refseq 20;17;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 3.4880 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_445044725-68925-105284 hallmark;refseq;vdb 51;25;14;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 3.4880 prophage linear Cluster_3 Gammaproteobacteria_gi_445046080 refseq 27;25;2; Viruses;unclassified phages;unknown;unknown;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 3.4880 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_445046160-96882-124905 hallmark;refseq 30;29;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 3.4880 prophage linear Cluster_7 Gammaproteobacteria_gi_445049494 hallmark;refseq 30;21;8;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 95.0083 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_445050172-7799-30730 hallmark;vdb 31;7;18;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 95.0083 prophage linear Cluster_33 Gammaproteobacteria_gi_445051585 refseq 15;15;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 95.0083 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_445055156 hallmark;refseq 20;16;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 99.0670 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_445057428 refseq 15;15;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 99.0670 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_445057462 hallmark;refseq 12;12;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 99.0670 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_445133466 hallmark;refseq 52;34;12;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Gallinarum str. 9184 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_445140874-56383-91164 hallmark;refseq 44;35;4;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Dublin str. SL1438 prophage linear Cluster_0 Gammaproteobacteria_gi_445143715 hallmark;refseq 53;33;15;5 Viruses;unclassified phages;;;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Dublin str. SL1438 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_445151433-32632-67317 hallmark;refseq 43;35;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Dublin str. HWS51 prophage linear Cluster_0 Gammaproteobacteria_gi_445154800 hallmark;refseq;vdb 45;31;10;4 Viruses;unclassified phages;;;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Dublin str. HWS51 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_445154918 hallmark;refseq 45;25;7;13 Viruses;unclassified phages;;;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Dublin str. HWS51 extrachromosomal linear Cluster_82 Gammaproteobacteria_gi_445155210-2317-28428 hallmark;refseq 33;30;;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Dublin str. HWS51 prophage linear Cluster_3 Gammaproteobacteria_gi_445156427 refseq 25;19;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Dublin str. HWS51 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_445178585 hallmark;refseq 15;14;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. SE8a extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_445182107-4553-45674 hallmark;refseq 47;40;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. 20037 prophage linear Cluster_0 Gammaproteobacteria_gi_445304760 hallmark;refseq 14;10;1;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unknown;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. 436 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_445339340 hallmark;refseq 13;10;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. 18569 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_445406158 hallmark;refseq 42;26;4;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii Naval-57 extrachromosomal linear Cluster_38 Gammaproteobacteria_gi_445412859 hallmark;refseq 60;21;6;33 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Tunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter sp. WC-743 extrachromosomal linear Cluster_210 Gammaproteobacteria_gi_445426787 hallmark 50;12;5;33 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter sp. WC-743 extrachromosomal circular Cluster_114 Gammaproteobacteria_gi_445431193-11943-67663 hallmark 59;17;6;36 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii OIFC021 prophage circular Cluster_66 Gammaproteobacteria_gi_445437041-4757-39406 hallmark;refseq 58;40;4;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii OIFC021 prophage linear Cluster_38 Gammaproteobacteria_gi_445451213 refseq 35;17;4;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii WC-A-92 extrachromosomal linear Cluster_38 Gammaproteobacteria_gi_445460533 hallmark;refseq 34;28;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii OIFC047 extrachromosomal linear Cluster_24 Gammaproteobacteria_gi_445466650 refseq 24;20;1;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii OIFC338 extrachromosomal linear Cluster_38 Gammaproteobacteria_gi_445471956 hallmark;refseq 38;23;4;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii OIFC338 extrachromosomal linear Cluster_38 Gammaproteobacteria_gi_445479627 hallmark;refseq 57;30;10;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii Naval-78 extrachromosomal linear Cluster_24 Gammaproteobacteria_gi_445479742 hallmark;refseq 35;15;7;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Tunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii Naval-78 extrachromosomal linear Cluster_169 Gammaproteobacteria_gi_445483523 refseq 9;6;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii Naval-78 extrachromosomal linear Cluster_109 Gammaproteobacteria_gi_445493120 hallmark;refseq 20;15;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AA-014 extrachromosomal linear Cluster_38 Gammaproteobacteria_gi_447915004-601935-615141 hallmark;refseq 19;15;1;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas poae RE*1-1-14 prophage linear Cluster_85 Gammaproteobacteria_gi_449057232-128143-134746 noncaudo 10;9;;1 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae O1 str. Inaba G4222 prophage linear Cluster_12 Gammaproteobacteria_gi_449059299-43501-79229 hallmark;refseq 39;25;5;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae hvKP1 prophage linear Cluster_0 Gammaproteobacteria_gi_450186470-25480-68528 hallmark;refseq 54;44;9;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli SEPT362 prophage linear Cluster_1 Gammaproteobacteria_gi_450197512 hallmark;vdb 28;10;16;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli SEPT362 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_450213427 refseq 18;11;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O08 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_450220355 hallmark;refseq 35;31;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O08 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_450229527 hallmark;refseq 57;49;1;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O08 extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_450232567-0-21739 hallmark;refseq 32;26;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O08 prophage linear Cluster_0 Gammaproteobacteria_gi_450232933 refseq 42;38;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O08 extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_451949272 hallmark;refseq 14;12;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 09BKT078844 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_451952016-43688-53777 hallmark;refseq 10;9;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 09BKT078844 prophage linear Cluster_0 Gammaproteobacteria_gi_451952018-2-22949 hallmark;refseq 31;25;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 09BKT078844 prophage linear Cluster_0 Gammaproteobacteria_gi_451966332-39695-70415 hallmark;refseq 39;32;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Edwardsiella Edwardsiella tarda NBRC 105688 prophage linear Cluster_0 Gammaproteobacteria_gi_451985044-10068-18249 refseq 11;8;1;2 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa 18A prophage linear Cluster_13 Gammaproteobacteria_gi_451987984-8291-16793 refseq 12;8;;4 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa 18A prophage linear Cluster_13 Gammaproteobacteria_gi_452119554-4094371-4184893 hallmark;refseq 79;68;7;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992 prophage linear Cluster_0 Gammaproteobacteria_gi_452192570 refseq 9;9;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4009 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_452192577 hallmark;refseq 17;14;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4009 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_452192741-52336-74907 hallmark;refseq 31;25;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4009 prophage linear Cluster_0 Gammaproteobacteria_gi_452212739-0-23562 hallmark;refseq 32;26;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4191 prophage linear Cluster_0 Gammaproteobacteria_gi_452212759 hallmark;refseq 17;14;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4191 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_452212852 refseq 13;13;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H7 str. EC4191 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_452215637 hallmark 20;6;6;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia albertii TW08933 extrachromosomal linear Cluster_33 Gammaproteobacteria_gi_452215663 hallmark;refseq 18;17;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia albertii TW08933 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_452215666 refseq 23;17;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia albertii TW08933 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_452215906 refseq 33;20;9;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia sp. TW09276 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_452216270 hallmark;refseq 15;11;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia sp. TW09231 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_452216275 hallmark;refseq 14;10;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia sp. TW09231 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_452216276 hallmark;refseq 31;28;;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia sp. TW09231 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_452216295 hallmark;refseq 24;21;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia sp. TW09231 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_452216325-1541-23370 hallmark;refseq 27;25;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia sp. TW09231 prophage linear Cluster_0 Gammaproteobacteria_gi_452216338 hallmark 19;4;2;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia sp. TW09231 extrachromosomal linear Cluster_259 Gammaproteobacteria_gi_452216446 refseq 16;10;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia sp. TW09231 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_452216472 noncaudo 10;3;2;5 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia sp. TW09231 extrachromosomal linear Cluster_51 Gammaproteobacteria_gi_452216517 hallmark;refseq 22;14;4;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia sp. TW09231 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_452217787 hallmark 26;8;4;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia albertii TW15818 extrachromosomal linear Cluster_259 Gammaproteobacteria_gi_452231127 hallmark;refseq 51;45;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia sp. TW10509 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_452231150 hallmark;refseq 35;12;8;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia sp. TW10509 extrachromosomal linear Cluster_483 Gammaproteobacteria_gi_452232995 refseq 10;8;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia sp. TW10509 extrachromosomal linear Cluster_71 Gammaproteobacteria_gi_452233116 refseq 11;6;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia sp. TW10509 extrachromosomal linear Cluster_230 Gammaproteobacteria_gi_452235384 hallmark;refseq 16;10;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia sp. TW10509 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_452235408 hallmark;refseq 37;28;9; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia sp. TW10509 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_452236873 hallmark;refseq 23;14;6;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia sp. TW10509 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_452239962-3915-27884 hallmark;refseq 37;30;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW10598 prophage linear Cluster_0 Gammaproteobacteria_gi_452240516 refseq 32;14;11;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW10598 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_452241475-9521-21478 hallmark;refseq 20;17;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW10598 prophage linear Cluster_503 Gammaproteobacteria_gi_452273295-79249-110491 hallmark;refseq 41;34;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW10722 prophage linear Cluster_0 Gammaproteobacteria_gi_452273531-99206-117201 hallmark;refseq 22;19;;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW10722 prophage linear Cluster_0 Gammaproteobacteria_gi_452273597-260-23478 hallmark;refseq 35;33;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW10722 prophage linear Cluster_7 Gammaproteobacteria_gi_452273801 hallmark;refseq;vdb 47;26;17;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW10722 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_452274055-2214-18704 hallmark;refseq 16;14;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW10722 prophage linear Cluster_7 Gammaproteobacteria_gi_452274130-4103-19361 hallmark;refseq 16;11;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW10722 prophage linear Cluster_10 Gammaproteobacteria_gi_452274161 hallmark;refseq 50;38;4;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW10722 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_452274193 refseq;vdb 19;12;3;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW10722 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_452274347 refseq 30;26;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;T4likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW10722 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_452274443 refseq 18;15;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW10722 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_452274493 hallmark;refseq 36;20;12;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW10722 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_452274683 hallmark;refseq 16;12;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW10722 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_452274727 refseq 15;13;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW10722 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_452281549-587-18200 hallmark;refseq;vdb 21;18;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW10828 prophage linear Cluster_0 Gammaproteobacteria_gi_452281869-39696-74191 hallmark;refseq 51;47;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW10828 prophage linear Cluster_3 Gammaproteobacteria_gi_452282245 hallmark;refseq 48;36;8;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW10828 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_452295903-49986-88798 hallmark;refseq 52;49;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW14425 prophage linear Cluster_7 Gammaproteobacteria_gi_452296314-32811-72001 hallmark;refseq 59;49;6;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW14425 prophage linear Cluster_3 Gammaproteobacteria_gi_452296328-0-19175 hallmark;refseq 22;18;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW14425 prophage linear Cluster_1 Gammaproteobacteria_gi_452300766 refseq 7;6;;1 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae O1 str. 2010EL-1798 extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_452301497 refseq 6;6;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae O1 str. 2010EL-1792 extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_452303148-1200487-1215658 hallmark;refseq 20;19;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia sp. TW11588 prophage linear Cluster_1 Gammaproteobacteria_gi_452304327 refseq 9;6;;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii 3990 extrachromosomal linear Cluster_275 Gammaproteobacteria_gi_452304334 hallmark;refseq 39;26;2;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii 3990 extrachromosomal linear Cluster_38 Gammaproteobacteria_gi_452304370 refseq 12;6;1;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii 3990 extrachromosomal linear Cluster_109 Gammaproteobacteria_gi_452304626 hallmark;refseq 54;28;7;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii 3990 extrachromosomal linear Cluster_38 Gammaproteobacteria_gi_452305578 hallmark;refseq 34;13;9;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Tunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii 3909 extrachromosomal linear Cluster_169 Gammaproteobacteria_gi_452305893 hallmark 41;8;6;27 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii 3909 extrachromosomal linear Cluster_66 Gammaproteobacteria_gi_452305926 hallmark 45;14;4;27 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii 3909 extrachromosomal linear Cluster_307 Gammaproteobacteria_gi_452305980 hallmark;refseq 7;6;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii 3909 extrachromosomal linear Cluster_307 Gammaproteobacteria_gi_452306288 hallmark;refseq 27;17;4;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii 3909 extrachromosomal linear Cluster_24 Gammaproteobacteria_gi_452311496 hallmark;refseq 22;20;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii 4190 extrachromosomal linear Cluster_46 Gammaproteobacteria_gi_452311739 refseq 21;11;1;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii 4190 extrachromosomal linear Cluster_24 Gammaproteobacteria_gi_452312103-0-28100 hallmark;refseq 52;17;8;27 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii 4190 prophage linear Cluster_169 Gammaproteobacteria_gi_452313998-2644-39699 hallmark;refseq 52;32;9;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii 4190 prophage linear Cluster_122 Gammaproteobacteria_gi_452314560 refseq 19;11;1;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii 4190 extrachromosomal linear Cluster_109 Gammaproteobacteria_gi_452314573 hallmark 22;8;2;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii 4190 extrachromosomal linear Cluster_114 Gammaproteobacteria_gi_452316241 refseq 25;10;5;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii 4190 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_452320644-17965-34739 hallmark;refseq 29;15;2;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii UMB001 prophage linear Cluster_346 Gammaproteobacteria_gi_452320881 refseq 13;7;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii UMB001 extrachromosomal linear Cluster_109 Gammaproteobacteria_gi_452320982 hallmark;refseq 26;16;4;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii UMB001 extrachromosomal linear Cluster_24 Gammaproteobacteria_gi_452322300 hallmark;refseq 115;45;21;49 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii UMB002 extrachromosomal circular Cluster_53 Gammaproteobacteria_gi_452323501-0-7665 hallmark;noncaudo;vdb 15;3;1;11 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii UMB003 prophage linear Cluster_497 Gammaproteobacteria_gi_452323783 hallmark;refseq 61;22;4;35 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii UMB003 extrachromosomal linear Cluster_307 Gammaproteobacteria_gi_452323793 hallmark 24;7;8;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii UMB003 extrachromosomal linear Cluster_28 Gammaproteobacteria_gi_452333151 refseq 57;34;16;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli H30 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_452333186-0-19179 hallmark;refseq 27;23;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli H30 prophage linear Cluster_1 Gammaproteobacteria_gi_452333186-4330884-4362684 hallmark;refseq 44;35;6;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli H30 prophage linear Cluster_0 Gammaproteobacteria_gi_452333186-4449771-4505917 hallmark;refseq 82;70;10;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli H30 prophage linear Cluster_4 Gammaproteobacteria_gi_452336975 hallmark 13;6;2;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 97.0264 extrachromosomal linear Cluster_47 Gammaproteobacteria_gi_452698371-1145829-1188312 hallmark;refseq 57;43;10;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. H112180280 prophage linear Cluster_1 Gammaproteobacteria_gi_452698371-1453180-1513576 hallmark;refseq 71;70;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. H112180280 prophage linear Cluster_5 Gammaproteobacteria_gi_452698371-1829516-1874202 hallmark;refseq 55;30;16;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. H112180280 prophage linear Cluster_1 Gammaproteobacteria_gi_452698371-2181559-2241032 hallmark;refseq 74;55;8;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. H112180280 prophage linear Cluster_5 Gammaproteobacteria_gi_452698371-2569941-2615406 hallmark;refseq 62;44;12;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. H112180280 prophage linear Cluster_1 Gammaproteobacteria_gi_452699756-597739-640224 hallmark;refseq 58;45;10;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. H112180282 prophage linear Cluster_1 Gammaproteobacteria_gi_452699756-905094-965490 hallmark;refseq 71;70;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. H112180282 prophage linear Cluster_5 Gammaproteobacteria_gi_452699759-317458-376932 hallmark;refseq 70;52;8;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. H112180282 prophage linear Cluster_5 Gammaproteobacteria_gi_452699761-0-37550 hallmark;refseq 46;35;8;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. H112180282 prophage linear Cluster_1 Gammaproteobacteria_gi_452699797-127665-161304 hallmark;refseq 53;41;4;8 Viruses;dsDNA viruses no RNA stage;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae O1 str. Amazonia prophage linear Cluster_3 Gammaproteobacteria_gi_452699866-203767-238055 hallmark;refseq 45;23;12;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. TY-2482 prophage linear Cluster_1 Gammaproteobacteria_gi_452699868-111361-171771 hallmark;refseq 73;70;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. TY-2482 prophage linear Cluster_5 Gammaproteobacteria_gi_452699937-0-31686 hallmark;refseq 48;37;8;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. TY-2482 prophage linear Cluster_1 Gammaproteobacteria_gi_452699957-152513-212033 hallmark;refseq 71;53;8;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. TY-2482 prophage linear Cluster_5 Gammaproteobacteria_gi_452700520 hallmark;refseq 31;23;6;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. H112180283 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_452700522 hallmark;refseq 16;14;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. H112180283 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_452700542-12756-77319 hallmark;refseq 77;70;7; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. H112180283 prophage linear Cluster_5 Gammaproteobacteria_gi_452700566 hallmark;refseq 22;12;6;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. H112180283 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_452700587 hallmark;refseq 33;25;5;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. H112180283 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_452700613 refseq 12;9;;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. H112180283 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_452700782-82558-127930 hallmark;refseq 59;58;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. GOS1 prophage linear Cluster_5 Gammaproteobacteria_gi_452700826-169-41231 hallmark;refseq 56;37;8;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. GOS1 prophage linear Cluster_5 Gammaproteobacteria_gi_452700882-0-32478 hallmark;refseq 45;37;6;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. GOS1 prophage linear Cluster_1 Gammaproteobacteria_gi_452700941 hallmark;refseq 18;13;4;1 Viruses;unclassified;unclassified;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. GOS1 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_452701015 hallmark;refseq 57;55;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. GOS2 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_452701017 refseq 10;10;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. GOS2 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_452701038-0-31737 hallmark;refseq 44;36;6;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. GOS2 prophage linear Cluster_1 Gammaproteobacteria_gi_452701128 hallmark;refseq 18;13;4;1 Viruses;unclassified;unclassified;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. GOS2 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_452701168 hallmark;refseq 20;18;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. GOS2 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_452701532-7556-21229 hallmark;refseq 16;14;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O103:H25 str. NIPH-11060424 prophage linear Cluster_2 Gammaproteobacteria_gi_452701598-37749-48071 hallmark;refseq 10;8;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O103:H25 str. NIPH-11060424 prophage linear Cluster_0 Gammaproteobacteria_gi_452701599-0-25258 hallmark;refseq 34;28;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O103:H25 str. NIPH-11060424 prophage linear Cluster_0 Gammaproteobacteria_gi_452701614 hallmark;refseq 12;12;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O103:H25 str. NIPH-11060424 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_452701617 refseq 12;11;1; Viruses;unclassified phages;unknown;unknown;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O103:H25 str. NIPH-11060424 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_452701623-89861-120984 hallmark;refseq 36;35;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O103:H25 str. NIPH-11060424 prophage linear Cluster_7 Gammaproteobacteria_gi_452701748 hallmark;refseq 14;12;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O103:H25 str. NIPH-11060424 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_452701977-23804-54250 hallmark;refseq 41;35;6; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H- str. 493-89 prophage linear Cluster_0 Gammaproteobacteria_gi_452701984 hallmark;refseq 12;10;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H- str. 493-89 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_452702256 hallmark;refseq 34;27;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H- str. 493-89 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_452702270-0-84541 hallmark;refseq 73;39;33;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H- str. 493-89 prophage linear Cluster_0 Gammaproteobacteria_gi_452702397 hallmark;refseq 34;32;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O113:H21 str. CL-3 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_452702411 hallmark;refseq 21;15;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O113:H21 str. CL-3 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_452702422 hallmark;vdb 40;12;21;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O113:H21 str. CL-3 extrachromosomal linear Cluster_33 Gammaproteobacteria_gi_452702430 hallmark;refseq 14;9;5; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O113:H21 str. CL-3 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_452702476 hallmark;refseq;vdb 16;12;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O113:H21 str. CL-3 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_452702481-13262-43697 hallmark;refseq 35;28;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O113:H21 str. CL-3 prophage linear Cluster_1 Gammaproteobacteria_gi_452702556-21717-52667 hallmark;refseq 39;36;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O91:H21 str. B2F1 prophage linear Cluster_0 Gammaproteobacteria_gi_452702652 refseq 26;22;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O91:H21 str. B2F1 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_452702736-872-14538 hallmark;refseq 15;13;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O91:H21 str. B2F1 prophage linear Cluster_2 Gammaproteobacteria_gi_452702750-344-33689 hallmark;refseq 48;37;9;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O91:H21 str. B2F1 prophage linear Cluster_1 Gammaproteobacteria_gi_452702826 refseq 18;15;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O121:H19 str. MT#2 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_452703068 hallmark;refseq 12;12;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O121:H19 str. MT#2 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_452703129-9089-37345 hallmark;refseq 37;24;5;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O121:H19 str. MT#2 prophage linear Cluster_2 Gammaproteobacteria_gi_452703256 refseq 21;16;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O45:H2 str. 03-EN-705 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_452703265 hallmark;refseq 26;12;5;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O45:H2 str. 03-EN-705 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_452703546 hallmark;refseq 23;11;5;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O45:H2 str. 03-EN-705 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_452703547-1224-31384 hallmark;refseq 34;22;9;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O45:H2 str. 03-EN-705 prophage linear Cluster_3 Gammaproteobacteria_gi_452703622-11893-45053 hallmark;refseq 42;35;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O145:H28 str. 4865/96 prophage linear Cluster_0 Gammaproteobacteria_gi_452703646 hallmark;refseq 25;15;7;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O145:H28 str. 4865/96 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_452703676 hallmark;refseq 18;15;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O145:H28 str. 4865/96 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_452703842 hallmark 25;11;6;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O145:H28 str. 4865/96 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_452704112 hallmark;refseq 29;14;4;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Tunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB5711 extrachromosomal linear Cluster_169 Gammaproteobacteria_gi_452704130-168869-206790 hallmark;refseq 52;31;9;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB5711 prophage linear Cluster_122 Gammaproteobacteria_gi_452704131-0-49186 hallmark;refseq 71;49;6;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB5711 prophage linear Cluster_24 Gammaproteobacteria_gi_452704132-327109-372859 hallmark;refseq 71;42;7;22 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB5711 prophage linear Cluster_38 Gammaproteobacteria_gi_452704137 hallmark;refseq 51;22;17;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB5711 extrachromosomal linear Cluster_28 Gammaproteobacteria_gi_452704186 refseq 7;7;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae O1 str. 3582-05 extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_452719833-1388182-1434543 hallmark;refseq 60;33;17;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. ON2010 prophage linear Cluster_1 Gammaproteobacteria_gi_452719833-2327158-2358979 hallmark;refseq 40;35;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. ON2010 prophage linear Cluster_0 Gammaproteobacteria_gi_452719833-812104-856118 hallmark;refseq 58;44;10;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. ON2010 prophage linear Cluster_1 Gammaproteobacteria_gi_452719837-1231269-1279456 refseq;vdb 45;33;6;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. ON2011 prophage linear Cluster_1 Gammaproteobacteria_gi_452719837-1608020-1667964 hallmark;refseq 73;54;9;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. ON2011 prophage linear Cluster_5 Gammaproteobacteria_gi_452719838-340934-402095 hallmark;refseq 72;69;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. ON2011 prophage linear Cluster_5 Gammaproteobacteria_gi_452719838-668063-709859 hallmark;refseq 55;41;9;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. ON2011 prophage linear Cluster_1 Gammaproteobacteria_gi_452720401 hallmark;refseq 53;28;8;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii W7282 extrachromosomal linear Cluster_24 Gammaproteobacteria_gi_452721090 hallmark;refseq 24;21;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhi str. BL196 extrachromosomal linear Cluster_21 Gammaproteobacteria_gi_452721118 hallmark;refseq 15;10;5; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli NCCP15657 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_452721152 hallmark;refseq 18;13;5; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli NCCP15657 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_452721156 refseq 17;8;5;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli NCCP15657 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_452721187 refseq 27;18;7;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli NCCP15657 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_452721188 refseq 22;20;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli NCCP15657 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_452721289 hallmark;refseq 20;14;6; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli NCCP15647 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_452721307-45460-81388 hallmark;refseq 50;37;8;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli NCCP15647 prophage linear Cluster_4 Gammaproteobacteria_gi_452721311 refseq 17;11;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli NCCP15647 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_452721330 hallmark;refseq 25;19;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli NCCP15647 extrachromosomal linear Cluster_26 Gammaproteobacteria_gi_452721350 hallmark;refseq 18;16;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli NCCP15647 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_452721357 hallmark;refseq 21;21;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli NCCP15647 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_452721371-78152-116277 hallmark;refseq 53;45;5;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli NCCP15647 prophage linear Cluster_11 Gammaproteobacteria_gi_452721410-2523-34157 hallmark;refseq 31;18;12;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli NCCP15658 prophage linear Cluster_4 Gammaproteobacteria_gi_452721410-50722-78675 hallmark;refseq 41;32;7;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli NCCP15658 prophage linear Cluster_1 Gammaproteobacteria_gi_452721412 refseq 20;10;7;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli NCCP15658 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_452721421 refseq 43;26;16;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli NCCP15658 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_452721428 hallmark;refseq 37;33;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli NCCP15658 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_452721429-103899-135400 hallmark;refseq 40;33;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli NCCP15658 prophage linear Cluster_0 Gammaproteobacteria_gi_452721457 hallmark;refseq 44;21;9;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli LCT-EC106 extrachromosomal linear Cluster_48 Gammaproteobacteria_gi_452721852 hallmark;refseq 19;8;1;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhi str. UJ308A extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_452721876 hallmark;refseq 15;13;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhi str. UJ308A extrachromosomal linear Cluster_21 Gammaproteobacteria_gi_452722213 hallmark;refseq 19;8;1;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhi str. UJ816A extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_452722248-54203-101991 hallmark;refseq 57;55;2; Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. ST1660/06 prophage linear Cluster_1 Gammaproteobacteria_gi_452722375-8659-40435 hallmark;refseq 47;32;7;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhi str. ST0208 prophage linear Cluster_21 Gammaproteobacteria_gi_452722397 hallmark;refseq 23;10;3;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhi str. ST0208 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_452722454-0-21528 hallmark;refseq 36;31;2;3 Viruses;unclassified;unclassified;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhi str. ST0208 prophage linear Cluster_82 Gammaproteobacteria_gi_452722580 refseq 16;8;4;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. 2010K-2599 extrachromosomal linear Cluster_428 Gammaproteobacteria_gi_452722814-1241962-1264681 refseq 29;15;6;8 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae H1 prophage linear Cluster_12 Gammaproteobacteria_gi_452724739-0-21996 hallmark;refseq 34;27;3;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhi str. CR0044 prophage linear Cluster_0 Gammaproteobacteria_gi_452724810 noncaudo 11;3;1;7 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhi str. CR0044 extrachromosomal circular Cluster_51 Gammaproteobacteria_gi_452724830-0-21736 hallmark;refseq 32;23;3;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhi str. CR0044 prophage linear Cluster_0 Gammaproteobacteria_gi_452724915 refseq 23;12;2;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii BZICU-2 extrachromosomal linear Cluster_38 Gammaproteobacteria_gi_452725005 hallmark;refseq 47;32;5;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii BZICU-2 extrachromosomal linear Cluster_24 Gammaproteobacteria_gi_452725045-148993-165717 hallmark;refseq 18;15;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Bareilly str. 06-0784 prophage linear Cluster_22 Gammaproteobacteria_gi_452725078 hallmark;refseq 24;18;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Bareilly str. 06-0784 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_452725141-20481-37135 hallmark;refseq 18;15;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Hartford str. 06-0676 prophage linear Cluster_22 Gammaproteobacteria_gi_452725145-490-44365 hallmark;refseq 56;50;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Hartford str. 06-0676 prophage linear Cluster_1 Gammaproteobacteria_gi_452725193-0-43674 hallmark;refseq 54;45;5;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Hadar str. 2011K-0112 prophage linear Cluster_1 Gammaproteobacteria_gi_452725248-13395-52192 hallmark;refseq 55;51;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Mississippi str. 2010K-1406 prophage linear Cluster_3 Gammaproteobacteria_gi_452725285-15551-42975 hallmark;refseq 32;30;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Mississippi str. 2010K-1406 prophage linear Cluster_23 Gammaproteobacteria_gi_452725306 hallmark;refseq 22;19;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Mississippi str. 2010K-1406 extrachromosomal linear Cluster_11 Gammaproteobacteria_gi_452725312 refseq 26;17;4;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Mississippi str. 2010K-1406 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_452732231-953-16887 noncaudo 6;5;1; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae VC1761 prophage linear Cluster_12 Gammaproteobacteria_gi_452732416-0-6233 refseq 10;7;1;2 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae VC4370 prophage linear Cluster_12 Gammaproteobacteria_gi_452732682 noncaudo 8;2;;6 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_1536-8 extrachromosomal linear Cluster_165 Gammaproteobacteria_gi_452732688-17311-51164 hallmark;refseq 53;29;6;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_1536-8 prophage linear Cluster_38 Gammaproteobacteria_gi_452732748 refseq 7;5;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_1536-8 extrachromosomal linear Cluster_109 Gammaproteobacteria_gi_452732861 hallmark 14;5;5;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_1582-8 extrachromosomal linear Cluster_28 Gammaproteobacteria_gi_452732913 hallmark;refseq 30;17;4;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_1582-8 extrachromosomal linear Cluster_38 Gammaproteobacteria_gi_452732950 hallmark;refseq 119;47;22;50 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_1582-8 extrachromosomal circular Cluster_53 Gammaproteobacteria_gi_452733005 hallmark;refseq 17;17;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_1582-8 extrachromosomal linear Cluster_46 Gammaproteobacteria_gi_452733007 hallmark 91;28;16;47 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_1582-8 extrachromosomal linear Cluster_66 Gammaproteobacteria_gi_452733147 hallmark;refseq 42;24;7;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_1583-8 extrachromosomal linear Cluster_38 Gammaproteobacteria_gi_452733154 hallmark;refseq 58;26;11;21 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_1583-8 extrachromosomal linear Cluster_299 Gammaproteobacteria_gi_452733165 hallmark;refseq 28;19;1;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_1583-8 extrachromosomal linear Cluster_46 Gammaproteobacteria_gi_452733324 hallmark;refseq 27;15;;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_1583-8 extrachromosomal linear Cluster_24 Gammaproteobacteria_gi_452733374 hallmark 26;9;4;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_1583-8 extrachromosomal linear Cluster_114 Gammaproteobacteria_gi_452733380 hallmark 23;6;2;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_1583-8 extrachromosomal linear Cluster_66 Gammaproteobacteria_gi_452733388 hallmark;refseq 18;16;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_1594-8 extrachromosomal linear Cluster_24 Gammaproteobacteria_gi_452733486-13328-70718 hallmark 54;14;7;33 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_1594-8 prophage linear Cluster_66 Gammaproteobacteria_gi_452733618 hallmark;refseq 22;17;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_1595-8 extrachromosomal linear Cluster_46 Gammaproteobacteria_gi_452733712 hallmark;refseq 54;29;7;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_1595-8 extrachromosomal linear Cluster_38 Gammaproteobacteria_gi_452733755-16505-69770 hallmark 52;13;10;29 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_1595-8 prophage linear Cluster_66 Gammaproteobacteria_gi_452733769 hallmark;refseq 92;43;8;41 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_1595-8 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_452733789 refseq 11;6;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_1595-8 extrachromosomal linear Cluster_93 Gammaproteobacteria_gi_452734260 hallmark;refseq 51;27;9;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_2007-09-110-01-7 extrachromosomal linear Cluster_122 Gammaproteobacteria_gi_452734332 hallmark 52;17;5;30 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_2007-09-110-01-7 extrachromosomal linear Cluster_66 Gammaproteobacteria_gi_452734354 hallmark;refseq 61;12;26;23 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Tunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_2007-09-110-01-7 extrachromosomal linear Cluster_169 Gammaproteobacteria_gi_452734370-48739-81557 hallmark;refseq;vdb 36;22;8;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_2007-16-25-01-7 prophage linear Cluster_24 Gammaproteobacteria_gi_452734382 refseq 39;16;6;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_2007-16-25-01-7 extrachromosomal linear Cluster_38 Gammaproteobacteria_gi_452734396 hallmark;refseq 39;17;1;21 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_2007-16-25-01-7 extrachromosomal linear Cluster_93 Gammaproteobacteria_gi_452734407 hallmark;refseq 28;14;1;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_2007-16-25-01-7 extrachromosomal linear Cluster_485 Gammaproteobacteria_gi_452734434 hallmark;refseq 45;31;4;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_2007-16-25-01-7 extrachromosomal circular Cluster_0 Gammaproteobacteria_gi_452734447-0-32794 hallmark;refseq;vdb 37;22;8;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_2007-16-27-01 prophage linear Cluster_24 Gammaproteobacteria_gi_452734458 hallmark;refseq 28;14;1;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_2007-16-27-01 extrachromosomal linear Cluster_485 Gammaproteobacteria_gi_452734466 hallmark;refseq 39;17;1;21 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_2007-16-27-01 extrachromosomal linear Cluster_93 Gammaproteobacteria_gi_452734469 refseq 9;6;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_2008-15-34-7 extrachromosomal linear Cluster_109 Gammaproteobacteria_gi_452734610 hallmark;refseq 17;12;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_2008-15-34-7 extrachromosomal linear Cluster_38 Gammaproteobacteria_gi_452734696 hallmark 25;5;2;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Punalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_2008-15-45 extrachromosomal linear Cluster_66 Gammaproteobacteria_gi_452734730 hallmark;refseq 16;12;1;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_2008-15-45 extrachromosomal linear Cluster_46 Gammaproteobacteria_gi_452734777 hallmark 25;5;2;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Punalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_2008-15-52 extrachromosomal linear Cluster_66 Gammaproteobacteria_gi_452734798 refseq 22;12;4;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_2008-15-52 extrachromosomal linear Cluster_38 Gammaproteobacteria_gi_452734812 hallmark;refseq 19;18;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_2008-15-52 extrachromosomal linear Cluster_46 Gammaproteobacteria_gi_452734874-244543-251248 hallmark;noncaudo;vdb 11;3;1;7 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_2008-15-69 prophage linear Cluster_497 Gammaproteobacteria_gi_452734905 hallmark;refseq 55;21;4;30 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_2008-15-69 extrachromosomal linear Cluster_307 Gammaproteobacteria_gi_452734921 hallmark 21;6;7;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_2008-15-69 extrachromosomal linear Cluster_28 Gammaproteobacteria_gi_452734995 hallmark 25;5;2;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Punalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_2008-15-70 extrachromosomal linear Cluster_66 Gammaproteobacteria_gi_452735198 refseq 22;12;4;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_2008-15-71 extrachromosomal linear Cluster_38 Gammaproteobacteria_gi_452735228 hallmark 25;5;2;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Punalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_2008-15-71 extrachromosomal linear Cluster_66 Gammaproteobacteria_gi_452735256 hallmark;refseq 19;18;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_2008-15-71 extrachromosomal linear Cluster_46 Gammaproteobacteria_gi_452735339 hallmark;refseq 19;17;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_2008-23-01-01-7 extrachromosomal linear Cluster_24 Gammaproteobacteria_gi_452735557 hallmark;refseq 119;47;22;50 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_2008-23-07-01-7 extrachromosomal circular Cluster_53 Gammaproteobacteria_gi_452735578 noncaudo 7;2;;5 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_2008-23-07-01-7 extrachromosomal circular Cluster_165 Gammaproteobacteria_gi_452735594 hallmark 35;8;4;23 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_2008-23-07-01-7 extrachromosomal linear Cluster_66 Gammaproteobacteria_gi_452735657 hallmark;refseq 37;29;2;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_2009-04-01-7 extrachromosomal linear Cluster_24 Gammaproteobacteria_gi_452735825 refseq 32;15;3;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;T4likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_2009-04-02-7 extrachromosomal linear Cluster_53 Gammaproteobacteria_gi_452735834-8512-93839 hallmark 102;29;16;57 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_2009-04-02-7 prophage linear Cluster_66 Gammaproteobacteria_gi_452735870 hallmark;refseq 44;25;4;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_2009-04-02-7 extrachromosomal linear Cluster_38 Gammaproteobacteria_gi_452735871 hallmark;refseq 36;30;1;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_2009-04-02-7 extrachromosomal linear Cluster_46 Gammaproteobacteria_gi_452735887 hallmark;refseq 26;12;1;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_515-8 extrachromosomal linear Cluster_93 Gammaproteobacteria_gi_452735940-0-29286 hallmark;refseq 52;30;4;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_515-8 prophage linear Cluster_38 Gammaproteobacteria_gi_452735978 refseq 25;13;5;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_515-8 extrachromosomal linear Cluster_109 Gammaproteobacteria_gi_452736072 hallmark;refseq 93;43;8;42 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_515-8 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_452736100 hallmark;refseq 23;18;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_515-8 extrachromosomal linear Cluster_46 Gammaproteobacteria_gi_452736173 hallmark;refseq 34;20;4;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_908-12 extrachromosomal linear Cluster_38 Gammaproteobacteria_gi_452736179 hallmark 110;29;22;59 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_908-12 extrachromosomal linear Cluster_66 Gammaproteobacteria_gi_452736190 hallmark 11;3;2;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_908-12 extrachromosomal linear Cluster_53 Gammaproteobacteria_gi_452736220 hallmark;refseq 31;26;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_908-12 extrachromosomal linear Cluster_46 Gammaproteobacteria_gi_452736221 refseq 50;21;5;24 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;T4likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_908-12 extrachromosomal linear Cluster_53 Gammaproteobacteria_gi_452736228-62729-82779 hallmark 28;11;5;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Tunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_908-13 prophage linear Cluster_317 Gammaproteobacteria_gi_452736338 refseq 9;6;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_908-13 extrachromosomal linear Cluster_267 Gammaproteobacteria_gi_452736396 hallmark;refseq 16;11;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_908-13 extrachromosomal linear Cluster_237 Gammaproteobacteria_gi_452736500 refseq 16;10;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_908-14-7 extrachromosomal linear Cluster_109 Gammaproteobacteria_gi_452736559 hallmark;refseq 28;15;4;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_908-14-7 extrachromosomal linear Cluster_38 Gammaproteobacteria_gi_452736570-1828-38427 hallmark;refseq 49;32;5;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_908-14-7 prophage linear Cluster_122 Gammaproteobacteria_gi_452736580 hallmark 36;8;5;23 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_908-14-7 extrachromosomal linear Cluster_66 Gammaproteobacteria_gi_452736597 hallmark;refseq 20;19;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_908-14-7 extrachromosomal linear Cluster_46 Gammaproteobacteria_gi_452736766 hallmark;refseq 18;16;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_909-01-7 extrachromosomal linear Cluster_24 Gammaproteobacteria_gi_452736803 noncaudo 7;2;;5 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_909-01-7 extrachromosomal linear Cluster_165 Gammaproteobacteria_gi_452736853 hallmark;refseq 28;18;2;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_909-02-7 extrachromosomal linear Cluster_46 Gammaproteobacteria_gi_452736859 hallmark;refseq 28;20;2;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_909-02-7 extrachromosomal linear Cluster_24 Gammaproteobacteria_gi_452736919 hallmark;refseq 64;26;8;30 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_909-05 extrachromosomal linear Cluster_53 Gammaproteobacteria_gi_452736964-0-41957 hallmark;refseq 57;35;3;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_909-05 prophage linear Cluster_46 Gammaproteobacteria_gi_452737010 hallmark;refseq 19;15;1;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_909-05 extrachromosomal linear Cluster_24 Gammaproteobacteria_gi_452737037 hallmark 14;4;2;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_909-05 extrachromosomal linear unclustered Gammaproteobacteria_gi_452737042 hallmark;refseq 18;17;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_909-05 extrachromosomal linear Cluster_46 Gammaproteobacteria_gi_452737044-7473-16164 refseq 16;8;;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_909-05 prophage linear Cluster_38 Gammaproteobacteria_gi_452737694 hallmark;refseq 25;14;1;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_TG19617 extrachromosomal linear Cluster_24 Gammaproteobacteria_gi_452737829 hallmark;refseq 18;16;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_TG2018 extrachromosomal linear Cluster_24 Gammaproteobacteria_gi_452737878 refseq 25;12;;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_TG2018 extrachromosomal linear Cluster_38 Gammaproteobacteria_gi_452737981 refseq 31;15;2;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_TG2022 extrachromosomal linear Cluster_38 Gammaproteobacteria_gi_452737991-1796-24904 refseq 35;15;7;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_TG2022 prophage linear Cluster_66 Gammaproteobacteria_gi_452738027 hallmark;refseq 17;10;3;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_TG2022 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_452738042 hallmark;refseq 104;39;18;47 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;T4likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_TG2022 extrachromosomal linear Cluster_53 Gammaproteobacteria_gi_452738055 hallmark 37;8;5;24 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Punalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_TG2022 extrachromosomal linear Cluster_66 Gammaproteobacteria_gi_452738061 hallmark;refseq 40;26;6;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_TG2022 extrachromosomal linear Cluster_24 Gammaproteobacteria_gi_452738158 hallmark;refseq 73;41;8;24 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_TG2023 extrachromosomal linear Cluster_38 Gammaproteobacteria_gi_452738232 hallmark;refseq 104;39;18;47 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_TG2023 extrachromosomal linear Cluster_53 Gammaproteobacteria_gi_452738256 hallmark;refseq 17;10;3;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_TG2023 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_452739078-807-31977 hallmark;refseq 40;28;2;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_TG2028 prophage linear Cluster_0 Gammaproteobacteria_gi_452739212 hallmark;refseq 26;10;6;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Tunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_TG2030 extrachromosomal linear Cluster_317 Gammaproteobacteria_gi_452739368 hallmark;refseq 13;8;;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_TG2032 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_452739385 hallmark;refseq 54;27;13;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_TG2032 extrachromosomal linear Cluster_122 Gammaproteobacteria_gi_452739397 hallmark;refseq 17;16;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_TG2032 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_452739596 hallmark;refseq 29;21;4;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_TG2032 extrachromosomal linear Cluster_24 Gammaproteobacteria_gi_452739659 hallmark;refseq 17;10;2;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Tunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_TG2032 extrachromosomal linear Cluster_317 Gammaproteobacteria_gi_452739674 hallmark;refseq 30;23;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_TG2631 extrachromosomal linear Cluster_24 Gammaproteobacteria_gi_452739676 refseq 20;13;2;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_TG2631 extrachromosomal linear Cluster_38 Gammaproteobacteria_gi_452739681 refseq 23;11;1;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_TG2631 extrachromosomal linear Cluster_38 Gammaproteobacteria_gi_452739750 hallmark;refseq 30;20;4;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_TG2631 extrachromosomal linear Cluster_24 Gammaproteobacteria_gi_452739800 hallmark;refseq 119;47;22;50 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_TG27323 extrachromosomal circular Cluster_53 Gammaproteobacteria_gi_452739863 hallmark;refseq 117;45;22;50 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_TG27327 extrachromosomal linear Cluster_53 Gammaproteobacteria_gi_452739929 refseq 14;8;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_TG27327 extrachromosomal linear Cluster_109 Gammaproteobacteria_gi_452740034 hallmark 29;6;5;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_TG27331 extrachromosomal linear Cluster_66 Gammaproteobacteria_gi_452740076 hallmark;refseq 108;44;20;44 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_TG27331 extrachromosomal linear Cluster_53 Gammaproteobacteria_gi_452740130 hallmark;refseq 119;47;22;50 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_TG27335 extrachromosomal circular Cluster_53 Gammaproteobacteria_gi_452740151-0-13480 refseq 26;15;1;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_TG27335 prophage linear Cluster_38 Gammaproteobacteria_gi_452740197 hallmark;refseq 28;19;3;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_TG27335 extrachromosomal linear Cluster_24 Gammaproteobacteria_gi_452740199 hallmark;refseq 25;22;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_TG27335 extrachromosomal linear Cluster_24 Gammaproteobacteria_gi_452740211 refseq 22;13;1;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_TG27335 extrachromosomal linear Cluster_38 Gammaproteobacteria_gi_452740235 hallmark 29;6;5;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_TG27335 extrachromosomal linear Cluster_66 Gammaproteobacteria_gi_452740256 hallmark;refseq 74;33;2;39 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_TG27339 extrachromosomal circular Cluster_24 Gammaproteobacteria_gi_452740263 hallmark;refseq 62;32;8;22 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_TG27339 extrachromosomal linear Cluster_38 Gammaproteobacteria_gi_452740366 hallmark;refseq 45;22;3;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_TG27343 extrachromosomal linear Cluster_299 Gammaproteobacteria_gi_452740379 refseq 6;5;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_TG27343 extrachromosomal linear Cluster_47 Gammaproteobacteria_gi_452740382 hallmark 38;13;9;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_TG27343 extrachromosomal linear Cluster_28 Gammaproteobacteria_gi_452740481 refseq 22;16;1;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_TG27343 extrachromosomal linear Cluster_38 Gammaproteobacteria_gi_452740514 hallmark;refseq 17;10;3;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_TG5064 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_452740544 hallmark;refseq 16;13;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_TG5064 extrachromosomal linear Cluster_46 Gammaproteobacteria_gi_452740582 refseq 14;11;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_TG5064 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_452740653 hallmark 50;16;13;21 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_TG5064 extrachromosomal linear Cluster_53 Gammaproteobacteria_gi_452740897 hallmark 27;4;4;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_TG5064 extrachromosomal linear Cluster_66 Gammaproteobacteria_gi_452740915 refseq 33;16;3;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;T4likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_TG5064 extrachromosomal linear Cluster_53 Gammaproteobacteria_gi_452740941 hallmark;refseq 37;26;4;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_TG5064 extrachromosomal linear Cluster_24 Gammaproteobacteria_gi_452740998 hallmark;refseq 26;14;;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii TG19582 extrachromosomal linear Cluster_93 Gammaproteobacteria_gi_452741105 hallmark;refseq 15;9;1;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii TG19582 extrachromosomal linear Cluster_93 Gammaproteobacteria_gi_452741198 hallmark;refseq 30;22;2;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii TG19582 extrachromosomal linear Cluster_24 Gammaproteobacteria_gi_452741290 hallmark 42;15;3;24 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii TG19582 extrachromosomal linear Cluster_237 Gammaproteobacteria_gi_452741317 refseq 35;12;6;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii TG19582 extrachromosomal linear Cluster_38 Gammaproteobacteria_gi_452741336-0-27633 hallmark;refseq 46;24;6;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_1766_8 prophage linear Cluster_38 Gammaproteobacteria_gi_452741421 hallmark 91;25;18;48 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_1766_8 extrachromosomal circular Cluster_66 Gammaproteobacteria_gi_452741513 hallmark;refseq 119;47;22;50 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_1766_8 extrachromosomal linear Cluster_53 Gammaproteobacteria_gi_452742835-4131361-4165668 hallmark;refseq 46;34;9;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HM605 prophage linear Cluster_0 Gammaproteobacteria_gi_452742916 hallmark;refseq 25;14;7;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. salamae str. 3588/07 extrachromosomal linear Cluster_347 Gammaproteobacteria_gi_452742962 hallmark;refseq 22;17;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. salamae str. 3588/07 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_452744447-68706-81470 hallmark;refseq 17;17;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Mannheimia Mannheimia haemolytica serotype 6 str. H23 prophage linear Cluster_0 Gammaproteobacteria_gi_452744447-71-36593 hallmark;refseq 47;23;8;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Mannheimia Mannheimia haemolytica serotype 6 str. H23 prophage linear Cluster_179 Gammaproteobacteria_gi_452745219-99277-117048 hallmark;refseq 29;28;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Mannheimia Mannheimia haemolytica serotype 6 str. H23 prophage linear Cluster_0 Gammaproteobacteria_gi_452916955 refseq 39;16;6;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB_2007-16-27-01 extrachromosomal linear Cluster_38 Gammaproteobacteria_gi_455595177 refseq 3;3;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-64A1 extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_455595206 refseq 7;7;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-64A1 extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_455737153-2257785-2291092 hallmark;refseq;vdb 41;29;6;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Morganella Morganella morganii subsp. morganii KT prophage linear Cluster_0 Gammaproteobacteria_gi_455819039-54416-58376 noncaudo 5;5;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-65A1 prophage linear Cluster_12 Gammaproteobacteria_gi_455819042 refseq 3;3;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-65A1 extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_455879185-54384-58344 noncaudo 5;5;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-67A1 prophage linear Cluster_12 Gammaproteobacteria_gi_455879681 refseq 3;3;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-67A1 extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_455907973-54396-58356 noncaudo 5;5;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-68A1 prophage linear Cluster_12 Gammaproteobacteria_gi_455908231 refseq 3;3;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-68A1 extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_455931979-572473-576433 noncaudo 5;5;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-71A1 prophage linear Cluster_12 Gammaproteobacteria_gi_455932501 refseq 3;3;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-71A1 extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_455970587-54357-58317 noncaudo 5;5;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-72A2 prophage linear Cluster_12 Gammaproteobacteria_gi_455970962 refseq 3;3;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-72A2 extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_455991563 hallmark;refseq 10;10;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-78A1 extrachromosomal linear Cluster_14 Gammaproteobacteria_gi_456045529-54357-58317 noncaudo 5;5;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-80A1 prophage linear Cluster_12 Gammaproteobacteria_gi_456045754 refseq 3;3;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-80A1 extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_458775987-356067-385385 hallmark;refseq 54;26;1;27 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii MSP4-16 prophage linear Cluster_24 Gammaproteobacteria_gi_458777347 refseq 15;9;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii MSP4-16 extrachromosomal linear Cluster_109 Gammaproteobacteria_gi_458890088-0-37784 hallmark;refseq 55;40;1;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa PA21_ST175 prophage linear Cluster_164 Gammaproteobacteria_gi_458890293 hallmark;refseq 50;50;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa PA21_ST175 extrachromosomal linear Cluster_59 Gammaproteobacteria_gi_458891299 noncaudo 12;2;1;9 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa PA21_ST175 extrachromosomal linear Cluster_163 Gammaproteobacteria_gi_458966203-46557-61769 hallmark;refseq 17;14;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Serratia Serratia marcescens VGH107 prophage linear Cluster_47 Gammaproteobacteria_gi_459791914-1006135-1026159 hallmark;refseq 26;17;1;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Stenotrophomonas Stenotrophomonas maltophilia EPM1 prophage linear Cluster_0 Gammaproteobacteria_gi_459791914-2356084-2359636 noncaudo 8;4;;4 Viruses;ssDNA viruses;unknown;Inoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Stenotrophomonas Stenotrophomonas maltophilia EPM1 prophage linear Cluster_578 Gammaproteobacteria_gi_459791914-2451169-2464612 noncaudo 20;5;5;10 Viruses;ssDNA viruses;unknown;Inoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Stenotrophomonas Stenotrophomonas maltophilia EPM1 prophage linear Cluster_578 Gammaproteobacteria_gi_459800005-21159-89156 hallmark;refseq 64;44;17;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. JS09102 prophage linear Cluster_22 Gammaproteobacteria_gi_459800110 hallmark;refseq 16;15;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. JS09102 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_459800241-69691-91484 hallmark;refseq 32;26;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. JS09102 prophage linear Cluster_0 Gammaproteobacteria_gi_459800831 refseq 53;48;;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. JS09102 extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_459800889 hallmark;refseq 45;37;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Punalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. JS09102 extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_459801106 hallmark;refseq 17;16;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. JS09102 extrachromosomal linear Cluster_11 Gammaproteobacteria_gi_459801124 refseq 21;18;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. JS09102 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_459801149 refseq 16;16;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. JS09102 extrachromosomal linear Cluster_23 Gammaproteobacteria_gi_459802387-44121-86864 hallmark;refseq 48;37;7;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. Henan_3 prophage linear Cluster_2 Gammaproteobacteria_gi_459806388-644735-692549 hallmark;refseq 57;52;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. Shandong_3 prophage linear Cluster_1 Gammaproteobacteria_gi_459810227-42875-86633 hallmark;refseq 51;46;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. Shandong_3 prophage linear Cluster_0 Gammaproteobacteria_gi_460067410-0-14125 hallmark;refseq;vdb 14;11;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae JHCK1 prophage linear Cluster_0 Gammaproteobacteria_gi_460069435 hallmark;refseq 61;43;2;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae JHCK1 extrachromosomal linear Cluster_25 Gammaproteobacteria_gi_460069709 hallmark;refseq 48;36;2;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae JHCK1 extrachromosomal linear Cluster_54 Gammaproteobacteria_gi_460069859 hallmark;refseq 45;22;3;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae JHCK1 extrachromosomal linear Cluster_82 Gammaproteobacteria_gi_460070406 hallmark;refseq 29;20;5;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae JHCK1 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_460070474 hallmark;refseq 32;24;2;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae JHCK1 extrachromosomal linear Cluster_247 Gammaproteobacteria_gi_460070536-85625-125555 hallmark;refseq 56;44;2;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae JHCK1 prophage linear Cluster_7 Gammaproteobacteria_gi_469816145 hallmark;refseq 119;47;22;50 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii MDR-TJ extrachromosomal linear Cluster_53 Gammaproteobacteria_gi_469916444-12488-58013 hallmark;refseq 80;49;3;28 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Morganella Morganella morganii SC01 prophage linear Cluster_54 Gammaproteobacteria_gi_469917935 hallmark 30;12;10;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Morganella Morganella morganii SC01 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_469917978 hallmark;refseq 33;21;6;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Morganella Morganella morganii SC01 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_469918018 hallmark;refseq 26;19;3;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Morganella Morganella morganii SC01 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_469921921 hallmark;refseq 32;24;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae VA360 extrachromosomal linear Cluster_25 Gammaproteobacteria_gi_469921988 hallmark;refseq 34;26;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae VA360 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_470152509-2504311-2508509 noncaudo 7;2;;5 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Pectobacterium Pectobacterium sp. SCC3193 prophage linear Cluster_51 Gammaproteobacteria_gi_470165991-1870118-1903978 hallmark;refseq 47;23;19;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Bibersteinia Bibersteinia trehalosi USDA-ARS-USMARC-192 prophage linear Cluster_3 Gammaproteobacteria_gi_470461182-3708160-3736834 hallmark;refseq 39;34;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Edwardsiella Edwardsiella tarda C07-087 prophage linear Cluster_0 Gammaproteobacteria_gi_470931083 hallmark;refseq 18;12;1;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae RYC492 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_470933712 hallmark;refseq 17;16;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae RYC492 extrachromosomal linear Cluster_64 Gammaproteobacteria_gi_470946471 hallmark;refseq 79;27;25;27 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Stenotrophomonas Stenotrophomonas maltophilia AU12-09 extrachromosomal linear Cluster_47 Gammaproteobacteria_gi_471999978 refseq 3;3;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae O1 str. 116059 extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_471999982 refseq 8;7;;1 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae O1 str. 116059 extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_472037766-67769-101407 hallmark;refseq 55;42;4;9 Viruses;dsDNA viruses no RNA stage;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae O1 str. 116063 prophage linear Cluster_3 Gammaproteobacteria_gi_472064940-62571-69922 hallmark;refseq 11;11;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae O1 str. 87395 prophage linear Cluster_14 Gammaproteobacteria_gi_472107175 hallmark;refseq 54;41;3;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae O1 str. 95412 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_472116569-193916-227698 hallmark;refseq 45;43;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae O1 str. 95412 prophage linear Cluster_97 Gammaproteobacteria_gi_472116832 refseq 6;6;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae O1 str. 95412 extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_472116838 refseq 3;3;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae O1 str. 95412 extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_472136372 refseq 7;7;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae O1 str. AG-7404 extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_472138558-127367-131320 noncaudo 5;5;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae O1 str. AG-8040 prophage linear Cluster_12 Gammaproteobacteria_gi_472150741-54320-58273 noncaudo 5;5;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae O1 str. EC-0009 prophage linear Cluster_12 Gammaproteobacteria_gi_472152950-54328-58281 noncaudo 5;5;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae O1 str. EC-0012 prophage linear Cluster_12 Gammaproteobacteria_gi_472158607-53975-58299 noncaudo 6;6;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae O1 str. EC-0027 prophage linear Cluster_12 Gammaproteobacteria_gi_472165800 refseq 3;3;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae O1 str. EC-0051 extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_472165804 refseq 8;7;;1 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae O1 str. EC-0051 extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_472167898-53984-58308 noncaudo 6;6;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae O1 str. EDC-020 prophage linear Cluster_12 Gammaproteobacteria_gi_472171873 refseq 7;7;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae O1 str. EDC-022 extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_472182363-39007-61395 refseq 13;9;3;1 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae O1 str. EM-1536 prophage linear Cluster_12 Gammaproteobacteria_gi_472182408 refseq 4;4;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae O1 str. EM-1536 extrachromosomal circular Cluster_12 Gammaproteobacteria_gi_472184608-53988-58312 noncaudo 6;6;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae O1 str. EM-1546 prophage linear Cluster_12 Gammaproteobacteria_gi_472184967-396439-428681 hallmark;refseq 44;44;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae O1 str. EM-1546 prophage linear Cluster_97 Gammaproteobacteria_gi_472188377-39001-60432 refseq 12;8;3;1 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae O1 str. EM-1626 prophage linear Cluster_12 Gammaproteobacteria_gi_472191142-53122-62570 hallmark;noncaudo 16;8;2;6 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae O1 str. EM-1676A prophage linear Cluster_14 Gammaproteobacteria_gi_472194267 refseq 3;3;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae O1 str. EM-1727 extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_472194270 refseq 8;7;;1 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae O1 str. EM-1727 extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_472200585 refseq 7;7;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae O1 str. NHCC-004A extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_472203943-54371-58819 noncaudo 6;6;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae O1 str. NHCC-006C prophage linear Cluster_12 Gammaproteobacteria_gi_472203988 noncaudo 3;2;;1 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae O1 str. NHCC-006C extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_472206314-499120-535616 hallmark;refseq 50;24;2;24 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae O1 str. NHCC-008D prophage linear Cluster_300 Gammaproteobacteria_gi_472207317-25-9589 hallmark;refseq 16;12;;4 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae O1 str. NHCC-008D prophage linear Cluster_14 Gammaproteobacteria_gi_472211598 refseq 7;7;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae O1 str. NHCC-010F extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_472215761-54318-58271 noncaudo 5;5;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae O1 str. Nep-21106 prophage linear Cluster_12 Gammaproteobacteria_gi_472218846-54318-58264 noncaudo 5;5;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae O1 str. Nep-21113 prophage linear Cluster_12 Gammaproteobacteria_gi_472223884-54326-58279 noncaudo 5;5;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae O1 str. PCS-023 prophage linear Cluster_12 Gammaproteobacteria_gi_472285897-350747-393129 hallmark;refseq 59;44;5;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae ATCC BAA-2146 prophage linear Cluster_25 Gammaproteobacteria_gi_472288398-262370-288094 hallmark;refseq 27;25;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae ATCC BAA-2146 prophage linear Cluster_7 Gammaproteobacteria_gi_472291012 refseq 16;14;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae ATCC BAA-2146 extrachromosomal linear Cluster_25 Gammaproteobacteria_gi_472295859 hallmark;refseq 21;15;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae 700603 extrachromosomal linear Cluster_247 Gammaproteobacteria_gi_472295960 hallmark;refseq 20;13;2;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae 700603 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_472296498-6183-25037 hallmark;refseq 32;25;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae ATCC BAA-1705 prophage linear Cluster_37 Gammaproteobacteria_gi_472298405-207854-250236 hallmark;refseq 59;44;5;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae ATCC BAA-1705 prophage linear Cluster_25 Gammaproteobacteria_gi_472301806 refseq 11;7;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae ATCC BAA-1705 extrachromosomal linear Cluster_427 Gammaproteobacteria_gi_472323176-4628751-4638475 noncaudo 12;6;1;5 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas denitrificans ATCC 13867 prophage linear Cluster_13 Gammaproteobacteria_gi_472332507-1237595-1272725 hallmark;refseq 51;49;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Mannheimia Mannheimia haemolytica USDA-ARS-USMARC-183 prophage linear Cluster_0 Gammaproteobacteria_gi_472335239-1447613-1465242 hallmark;refseq 26;24;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Mannheimia Mannheimia haemolytica USDA-ARS-USMARC-185 prophage linear Cluster_0 Gammaproteobacteria_gi_472444181-34-8590 noncaudo 11;7;1;3 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio harveyi CAIM 1792 prophage linear Cluster_14 Gammaproteobacteria_gi_474484738-25839-57598 hallmark;refseq 44;36;6;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. E92/11 prophage linear Cluster_1 Gammaproteobacteria_gi_474485055 hallmark;refseq 67;66;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. E92/11 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_474487363-126846-186320 hallmark;refseq 67;49;8;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. E92/11 prophage linear Cluster_5 Gammaproteobacteria_gi_474503652-25521-56382 hallmark;refseq 44;36;6;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. E112/10 prophage linear Cluster_1 Gammaproteobacteria_gi_474503971 hallmark;refseq 67;66;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. E112/10 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_474504618-81200-140674 hallmark;refseq 67;51;8;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. E112/10 prophage linear Cluster_5 Gammaproteobacteria_gi_474504914-0-16156 hallmark;refseq 19;14;4;1 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. E112/10 prophage linear Cluster_0 Gammaproteobacteria_gi_474505108 refseq 36;28;8; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. E112/10 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_474515220 refseq 20;10;7;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. E112/10 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_474562890-41568-74334 hallmark;refseq 42;34;4;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O127:H27 str. C43/90 prophage linear Cluster_0 Gammaproteobacteria_gi_476380484-123980-194322 hallmark;refseq 100;69;16;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE5 prophage linear Cluster_10 Gammaproteobacteria_gi_476380486-863746-899990 hallmark;refseq 45;35;8;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE5 prophage linear Cluster_0 Gammaproteobacteria_gi_476380487-807643-857440 hallmark;refseq;vdb 57;35;16;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE5 prophage linear Cluster_2 Gammaproteobacteria_gi_476380491-1385007-1416678 hallmark;refseq 45;29;8;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE10 prophage linear Cluster_0 Gammaproteobacteria_gi_476380493-601822-633478 hallmark;refseq 41;34;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE10 prophage linear Cluster_0 Gammaproteobacteria_gi_476380502-3252303-3284408 hallmark;refseq 38;32;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE11 prophage linear Cluster_0 Gammaproteobacteria_gi_476380502-951525-998107 hallmark;refseq 54;32;13;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE11 prophage linear Cluster_26 Gammaproteobacteria_gi_476380515-357967-387431 hallmark;refseq 42;31;8;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE12 prophage linear Cluster_1 Gammaproteobacteria_gi_476380521-381843-429235 hallmark;refseq 67;63;1;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE12 prophage linear Cluster_81 Gammaproteobacteria_gi_476380536-584173-632274 hallmark;refseq;vdb 63;40;19;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE16 prophage linear Cluster_1 Gammaproteobacteria_gi_476380541-610667-647044 hallmark;refseq 51;47;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE16 prophage linear Cluster_11 Gammaproteobacteria_gi_476380552-69-10752 hallmark;refseq 15;14;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE21 prophage linear Cluster_1 Gammaproteobacteria_gi_476380560-424799-452993 hallmark;refseq 44;33;6;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE21 prophage linear Cluster_1 Gammaproteobacteria_gi_476380562-56604-94271 hallmark;refseq 55;46;4;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE21 prophage linear Cluster_3 Gammaproteobacteria_gi_476380574 hallmark;refseq 53;22;13;18 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE21 extrachromosomal circular Cluster_48 Gammaproteobacteria_gi_476380576 hallmark;refseq 53;29;18;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE21 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_476380579-3327215-3366430 hallmark;refseq 50;45;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE25 prophage linear Cluster_7 Gammaproteobacteria_gi_476380579-955723-997800 hallmark;refseq 63;52;3;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE25 prophage linear Cluster_3 Gammaproteobacteria_gi_476380589-130-35412 hallmark;refseq 44;37;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE26 prophage linear Cluster_1 Gammaproteobacteria_gi_476380601 refseq 31;16;11;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE28 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_476380610-1174965-1208637 hallmark;refseq 32;20;10;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE39 prophage linear Cluster_1 Gammaproteobacteria_gi_476380610-1222740-1260052 hallmark;refseq 51;36;8;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE39 prophage linear Cluster_21 Gammaproteobacteria_gi_476380612-306-23023 hallmark;refseq 37;28;5;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE39 prophage linear Cluster_1 Gammaproteobacteria_gi_476380616-48173-86457 hallmark;refseq 50;41;8;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE39 prophage linear Cluster_1 Gammaproteobacteria_gi_476380636-100918-132544 hallmark;refseq 38;32;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE44 prophage linear Cluster_0 Gammaproteobacteria_gi_476380646-1483009-1516509 hallmark;refseq 42;34;6;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE178 prophage linear Cluster_0 Gammaproteobacteria_gi_476380646-450010-498047 hallmark;refseq;vdb 65;48;9;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE178 prophage linear Cluster_1 Gammaproteobacteria_gi_476380648-1482964-1521668 hallmark;refseq 53;47;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE178 prophage linear Cluster_7 Gammaproteobacteria_gi_476380648-790555-832809 hallmark;refseq 59;28;15;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE178 prophage linear Cluster_0 Gammaproteobacteria_gi_476380656-1123567-1155269 hallmark;refseq 40;33;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE181 prophage linear Cluster_0 Gammaproteobacteria_gi_476380661-1176054-1206348 hallmark;refseq 43;35;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE181 prophage linear Cluster_1 Gammaproteobacteria_gi_476380668-59801-92011 hallmark;refseq 43;33;5;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE187 prophage linear Cluster_0 Gammaproteobacteria_gi_476380682-0-16384 hallmark;refseq 17;15;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE189 prophage linear Cluster_0 Gammaproteobacteria_gi_476380685-330546-356088 hallmark;refseq 34;25;7;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE189 prophage linear Cluster_1 Gammaproteobacteria_gi_476380697-1188793-1227017 hallmark;refseq 57;51;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE191 prophage linear Cluster_11 Gammaproteobacteria_gi_476380707-486558-562638 hallmark;refseq 77;58;11;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE193 prophage linear Cluster_4 Gammaproteobacteria_gi_476380707-795697-827043 hallmark;refseq 41;34;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE193 prophage linear Cluster_0 Gammaproteobacteria_gi_476380727-419561-448282 hallmark;refseq 41;34;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE204 prophage linear Cluster_1 Gammaproteobacteria_gi_476380735-161521-194688 hallmark;refseq 41;35;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE204 prophage linear Cluster_0 Gammaproteobacteria_gi_476380742-193570-226332 hallmark;refseq 42;37;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE205 prophage linear Cluster_0 Gammaproteobacteria_gi_476380746-113346-155125 hallmark;refseq 51;39;4;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE206 prophage linear Cluster_2 Gammaproteobacteria_gi_476380747-1287880-1299951 hallmark;noncaudo 19;11;;8 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE206 prophage linear Cluster_36 Gammaproteobacteria_gi_476380759-0-38379 hallmark;refseq;vdb 46;31;7;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE208 prophage linear Cluster_1 Gammaproteobacteria_gi_476380775-2664277-2697137 hallmark;refseq 42;34;5;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE210 prophage linear Cluster_0 Gammaproteobacteria_gi_476380783-2363136-2405818 hallmark;refseq 59;50;5;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE212 prophage linear Cluster_11 Gammaproteobacteria_gi_476380783-404004-442095 hallmark;refseq 54;46;5;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE212 prophage linear Cluster_3 Gammaproteobacteria_gi_476380783-4427925-4459527 hallmark;refseq 40;34;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE212 prophage linear Cluster_0 Gammaproteobacteria_gi_476380788-1695896-1729568 hallmark;refseq 40;34;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE213 prophage linear Cluster_0 Gammaproteobacteria_gi_476380788-2028785-2069445 hallmark;refseq 60;44;9;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE213 prophage linear Cluster_3 Gammaproteobacteria_gi_476380788-2213482-2254193 hallmark;refseq 55;51;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE213 prophage linear Cluster_7 Gammaproteobacteria_gi_476380788-2379429-2409940 hallmark;refseq 43;35;5;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE213 prophage linear Cluster_0 Gammaproteobacteria_gi_476380793-0-55342 hallmark;refseq 49;32;12;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE214 prophage linear Cluster_1 Gammaproteobacteria_gi_476380807 hallmark;refseq 67;33;28;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE216 extrachromosomal circular Cluster_1 Gammaproteobacteria_gi_476380809 refseq 38;14;17;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE216 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_476380810-771868-846558 hallmark;refseq 100;59;25;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE216 prophage linear Cluster_21 Gammaproteobacteria_gi_476380825-678521-709343 hallmark;refseq 42;27;12;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE224 prophage linear Cluster_1 Gammaproteobacteria_gi_476380831-1586839-1625952 hallmark;refseq 50;45;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE224 prophage linear Cluster_7 Gammaproteobacteria_gi_476380838-1460006-1500058 hallmark;refseq 53;48;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE228 prophage linear Cluster_7 Gammaproteobacteria_gi_476380859-4002074-4053649 hallmark;refseq;vdb 72;36;18;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE233 prophage linear Cluster_3 Gammaproteobacteria_gi_476380859-83941-102904 hallmark;refseq 24;18;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE233 prophage linear Cluster_0 Gammaproteobacteria_gi_476380862-3258041-3297695 hallmark;refseq 62;53;7;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE234 prophage linear Cluster_11 Gammaproteobacteria_gi_476380874-1484514-1527245 hallmark;refseq 61;51;6;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE235 prophage linear Cluster_7 Gammaproteobacteria_gi_476380874-1655020-1684549 hallmark;refseq 41;32;6;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE235 prophage linear Cluster_0 Gammaproteobacteria_gi_476380890-0-27500 hallmark;refseq 42;28;10;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE236 prophage linear Cluster_10 Gammaproteobacteria_gi_476380900 refseq 17;8;5;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE237 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_476380905-52888-77845 hallmark;refseq 40;31;8;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE47 prophage linear Cluster_4 Gammaproteobacteria_gi_476380908-0-33850 hallmark;refseq;vdb 40;24;13;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE47 prophage linear Cluster_4 Gammaproteobacteria_gi_476380916-2566167-2608422 hallmark;refseq 60;28;15;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE49 prophage linear Cluster_0 Gammaproteobacteria_gi_476380943-569036-615893 hallmark;refseq 57;44;8;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE51 prophage linear Cluster_1 Gammaproteobacteria_gi_476380943-914795-958225 hallmark;refseq 59;48;6;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE51 prophage linear Cluster_11 Gammaproteobacteria_gi_476380946 hallmark;refseq 22;12;5;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE51 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_476380949-423179-467289 hallmark;refseq 56;50;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE51 prophage linear Cluster_7 Gammaproteobacteria_gi_476380958-503324-544603 hallmark;refseq 59;50;6;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE53 prophage linear Cluster_11 Gammaproteobacteria_gi_476380959 hallmark;refseq 55;45;5;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE53 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_476380961-1502547-1544475 hallmark;refseq 57;48;5;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE53 prophage linear Cluster_7 Gammaproteobacteria_gi_476380971-1180836-1221225 hallmark;refseq 60;46;8;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE55 prophage linear Cluster_11 Gammaproteobacteria_gi_476380987 hallmark;refseq 62;36;15;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE57 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_476380991-73071-106132 hallmark;refseq 43;38;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE57 prophage linear Cluster_0 Gammaproteobacteria_gi_476381012 hallmark;refseq 112;75;14;23 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE60 extrachromosomal circular Cluster_79 Gammaproteobacteria_gi_476381019-518604-568094 hallmark;refseq;vdb 59;37;15;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE62 prophage linear Cluster_1 Gammaproteobacteria_gi_476381022-339985-380455 hallmark;refseq;vdb 37;27;7;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE62 prophage linear Cluster_1 Gammaproteobacteria_gi_476381036-3041258-3080201 hallmark;refseq 49;47;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE66 prophage linear Cluster_7 Gammaproteobacteria_gi_476381050-549346-579147 hallmark;refseq 38;26;11;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE72 prophage linear Cluster_1 Gammaproteobacteria_gi_476381050-91750-131793 hallmark;refseq 59;47;4;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE72 prophage linear Cluster_3 Gammaproteobacteria_gi_476381058-1476182-1517996 hallmark;refseq 54;46;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE72 prophage linear Cluster_7 Gammaproteobacteria_gi_476381059-229-63421 hallmark;refseq 70;61;3;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE72 prophage circular Cluster_16 Gammaproteobacteria_gi_476381075 hallmark;refseq 18;17;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE75 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_476381094 refseq 15;15;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE75 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_476381095-129215-173081 hallmark;refseq 60;39;14;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE75 prophage linear Cluster_1 Gammaproteobacteria_gi_476381097-728037-760225 hallmark;refseq 41;36;5; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE75 prophage linear Cluster_0 Gammaproteobacteria_gi_476381109-1234427-1283335 hallmark;refseq 64;51;10;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE77 prophage linear Cluster_1 Gammaproteobacteria_gi_476381111-156689-188264 hallmark;refseq 41;34;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE77 prophage linear Cluster_0 Gammaproteobacteria_gi_476381120-882468-913752 hallmark;refseq 38;33;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE80 prophage linear Cluster_0 Gammaproteobacteria_gi_476381127-56380-93881 hallmark;refseq 57;51;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE80 prophage linear Cluster_3 Gammaproteobacteria_gi_476381137 hallmark;refseq 31;25;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE80 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_476381142 hallmark;refseq 34;19;8;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE80 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_476381159-423247-449565 hallmark;refseq 37;30;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE83 prophage linear Cluster_1 Gammaproteobacteria_gi_476381161 hallmark;refseq 101;54;38;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE83 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_476381162-1114784-1146486 hallmark;refseq 40;33;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE83 prophage linear Cluster_0 Gammaproteobacteria_gi_476381174-175766-216344 hallmark;refseq 45;32;10;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE86 prophage linear Cluster_1 Gammaproteobacteria_gi_476381196-1433682-1473548 hallmark;refseq 55;50;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE93 prophage linear Cluster_7 Gammaproteobacteria_gi_476381208 hallmark;refseq 93;53;16;24 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Punalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE111 extrachromosomal linear Cluster_19 Gammaproteobacteria_gi_476381211-2006354-2091719 hallmark;refseq 100;60;31;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE116 prophage linear Cluster_1 Gammaproteobacteria_gi_476381211-3549557-3592288 hallmark;refseq 61;51;6;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE116 prophage linear Cluster_7 Gammaproteobacteria_gi_476381211-3720063-3749592 hallmark;refseq 41;32;6;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE116 prophage linear Cluster_0 Gammaproteobacteria_gi_476381216-0-12230 hallmark;refseq 17;15;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE119 prophage linear Cluster_3 Gammaproteobacteria_gi_476381217-98845-122360 hallmark;refseq 36;29;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE119 prophage linear Cluster_1 Gammaproteobacteria_gi_476381218-2368934-2404657 hallmark;refseq 50;40;7;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE119 prophage linear Cluster_11 Gammaproteobacteria_gi_476381218-4210194-4246370 hallmark;refseq 46;41;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE119 prophage linear Cluster_3 Gammaproteobacteria_gi_476381246 hallmark;refseq 30;27;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE143 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_476381252-1404360-1434619 hallmark;refseq 30;24;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE156 prophage linear Cluster_0 Gammaproteobacteria_gi_476381252-2649133-2689004 hallmark;refseq 32;24;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE156 prophage linear Cluster_0 Gammaproteobacteria_gi_476381263-61157-86387 hallmark;refseq;vdb 38;25;4;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE162 prophage linear Cluster_21 Gammaproteobacteria_gi_476381271-305276-335960 hallmark;refseq 41;27;11;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE169 prophage linear Cluster_1 Gammaproteobacteria_gi_476381274-357585-383687 hallmark;refseq;vdb 35;30;5; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE169 prophage linear Cluster_1 Gammaproteobacteria_gi_476381276-1438879-1477992 hallmark;refseq 50;45;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE169 prophage linear Cluster_7 Gammaproteobacteria_gi_476381295-2982205-3065030 hallmark;refseq;vdb 100;58;35;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE6 prophage linear Cluster_1 Gammaproteobacteria_gi_476381295-3762991-3806311 hallmark;refseq 60;29;14;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE6 prophage linear Cluster_0 Gammaproteobacteria_gi_476381295-3955943-3997214 hallmark;refseq 60;51;5;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE6 prophage linear Cluster_11 Gammaproteobacteria_gi_476381304-121488-154149 hallmark;refseq 43;36;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE8 prophage linear Cluster_2 Gammaproteobacteria_gi_476381307-1271409-1312120 hallmark;refseq 55;51;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE9 prophage linear Cluster_7 Gammaproteobacteria_gi_476381315-68971-107303 hallmark;refseq 54;48;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE18 prophage linear Cluster_3 Gammaproteobacteria_gi_476381322-1528753-1570814 hallmark;refseq 64;52;9;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE45 prophage linear Cluster_3 Gammaproteobacteria_gi_476381322-3085625-3127173 hallmark;refseq 52;47;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE45 prophage linear Cluster_7 Gammaproteobacteria_gi_476381329-2348640-2387854 hallmark;refseq 49;44;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE23 prophage linear Cluster_7 Gammaproteobacteria_gi_476381329-68193-108083 hallmark;refseq 55;49;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE23 prophage linear Cluster_3 Gammaproteobacteria_gi_476381334-632879-658982 hallmark;refseq;vdb 37;31;6; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE43 prophage linear Cluster_1 Gammaproteobacteria_gi_476381339-2059490-2092698 hallmark;refseq 41;35;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE29 prophage linear Cluster_0 Gammaproteobacteria_gi_476381349-2384724-2426272 hallmark;refseq 52;47;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE46 prophage linear Cluster_7 Gammaproteobacteria_gi_476381349-821019-863154 hallmark;refseq 64;51;9;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE46 prophage linear Cluster_3 Gammaproteobacteria_gi_476381353-165621-196426 hallmark;refseq 40;34;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE48 prophage linear Cluster_0 Gammaproteobacteria_gi_476381353-1834616-1866545 hallmark;refseq 34;20;6;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE48 prophage linear Cluster_0 Gammaproteobacteria_gi_476381383-384433-432078 hallmark;refseq;vdb 62;42;13;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE78 prophage linear Cluster_1 Gammaproteobacteria_gi_476381392-1992882-2040527 hallmark;refseq;vdb 62;42;13;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE79 prophage linear Cluster_1 Gammaproteobacteria_gi_476381394-164551-199692 hallmark;refseq 46;34;7;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE84 prophage linear Cluster_0 Gammaproteobacteria_gi_476381397-2084667-2116487 hallmark;refseq 39;33;6; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE91 prophage linear Cluster_0 Gammaproteobacteria_gi_476381397-637041-655626 hallmark;refseq 25;21;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE91 prophage linear Cluster_11 Gammaproteobacteria_gi_476381404-4054485-4070801 refseq;vdb 24;20;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE101 prophage linear Cluster_1 Gammaproteobacteria_gi_476381408-645012-684518 hallmark;refseq 54;47;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE115 prophage linear Cluster_11 Gammaproteobacteria_gi_476381413-3683230-3720674 hallmark;refseq 44;35;8;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE118 prophage linear Cluster_1 Gammaproteobacteria_gi_476381421-441562-480358 hallmark;refseq;vdb 52;43;6;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE135 prophage linear Cluster_11 Gammaproteobacteria_gi_476381421-560419-591917 hallmark;refseq 39;34;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE135 prophage linear Cluster_0 Gammaproteobacteria_gi_476381423-1238532-1283901 hallmark;refseq 59;45;8;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE136 prophage linear Cluster_1 Gammaproteobacteria_gi_476381424-72207-102924 hallmark;refseq 39;34;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE136 prophage linear Cluster_0 Gammaproteobacteria_gi_476381429-2863333-2897005 hallmark;refseq 40;34;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE140 prophage linear Cluster_0 Gammaproteobacteria_gi_476381429-3196366-3236799 hallmark;refseq 60;45;9;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE140 prophage linear Cluster_3 Gammaproteobacteria_gi_476381429-3380515-3421226 hallmark;refseq 55;51;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE140 prophage linear Cluster_7 Gammaproteobacteria_gi_476381429-3548122-3578633 hallmark;refseq 43;35;5;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE140 prophage linear Cluster_0 Gammaproteobacteria_gi_476381429-445645-492639 hallmark;refseq;vdb 61;40;16;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE140 prophage linear Cluster_2 Gammaproteobacteria_gi_476381438-65173-97383 hallmark;refseq 42;33;5;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE141 prophage linear Cluster_0 Gammaproteobacteria_gi_476381441-1256549-1279518 hallmark;refseq 29;22;2;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE144 prophage linear Cluster_26 Gammaproteobacteria_gi_476381441-359211-413263 hallmark;refseq;vdb 69;47;13;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE144 prophage linear Cluster_1 Gammaproteobacteria_gi_476381442 hallmark;refseq 17;16;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE144 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_476381444-634547-647305 hallmark;refseq 11;10;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE144 prophage linear Cluster_0 Gammaproteobacteria_gi_476381445-463096-503464 hallmark;refseq 52;47;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE144 prophage linear Cluster_7 Gammaproteobacteria_gi_476381445-56-12643 hallmark;refseq 16;15;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE144 prophage linear Cluster_0 Gammaproteobacteria_gi_476381448-2942-13427 hallmark;refseq 12;11;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE144 prophage linear Cluster_0 Gammaproteobacteria_gi_476381450-646168-688393 hallmark;refseq 69;60;5;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE146 prophage linear Cluster_81 Gammaproteobacteria_gi_476381457 refseq 7;6;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE146 extrachromosomal linear Cluster_158 Gammaproteobacteria_gi_476381460-3190120-3236720 hallmark;refseq;vdb 60;37;17;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE147 prophage linear Cluster_2 Gammaproteobacteria_gi_476381461-2289378-2323191 hallmark;refseq 32;22;1;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE154 prophage linear Cluster_114 Gammaproteobacteria_gi_476381468-965939-997865 hallmark;refseq 44;35;5;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE158 prophage linear Cluster_0 Gammaproteobacteria_gi_476381469-4199994-4233224 hallmark;refseq 40;33;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE165 prophage linear Cluster_0 Gammaproteobacteria_gi_476381473-1296873-1306094 hallmark;noncaudo 12;7;;5 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE192 prophage linear Cluster_36 Gammaproteobacteria_gi_476381477-1186890-1222072 hallmark;refseq 53;48;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE194 prophage linear Cluster_11 Gammaproteobacteria_gi_476381478-1593088-1634512 hallmark;refseq 53;45;5;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE194 prophage linear Cluster_7 Gammaproteobacteria_gi_476381486-2746308-2778951 hallmark;refseq 43;33;5;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE190 prophage linear Cluster_0 Gammaproteobacteria_gi_476381491-53973-94462 hallmark;refseq 50;41;6;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE173 prophage linear Cluster_2 Gammaproteobacteria_gi_476381492-0-50702 hallmark;refseq 51;29;17;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE173 prophage linear Cluster_1 Gammaproteobacteria_gi_476381496-96937-137426 hallmark;refseq 51;41;6;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE175 prophage linear Cluster_2 Gammaproteobacteria_gi_476381505-2089562-2108147 hallmark;refseq 25;21;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE184 prophage linear Cluster_11 Gammaproteobacteria_gi_476381505-3513263-3545083 hallmark;refseq 39;33;6; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE184 prophage linear Cluster_0 Gammaproteobacteria_gi_476381511-2101660-2155414 hallmark;refseq 68;43;17;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE196 prophage linear Cluster_4 Gammaproteobacteria_gi_476381518-1532895-1549618 hallmark;refseq 27;21;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE197 prophage linear Cluster_1 Gammaproteobacteria_gi_476381518-2905812-2922639 hallmark;refseq 22;16;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE197 prophage linear Cluster_0 Gammaproteobacteria_gi_476381527 hallmark;refseq 92;77;7;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE203 extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_476381534-521943-564804 hallmark;refseq 56;47;4;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE209 prophage linear Cluster_7 Gammaproteobacteria_gi_476381554 hallmark;refseq 9;6;1;2 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE215 extrachromosomal linear Cluster_36 Gammaproteobacteria_gi_476381557-2381789-2419798 hallmark;refseq 47;43;1;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE217 prophage linear Cluster_7 Gammaproteobacteria_gi_476381557-68896-107228 hallmark;refseq 54;49;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE217 prophage linear Cluster_3 Gammaproteobacteria_gi_476381577-341156-370498 hallmark;refseq 38;34;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE227 prophage linear Cluster_0 Gammaproteobacteria_gi_476381578-1240816-1282875 hallmark;refseq 54;49;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE227 prophage linear Cluster_7 Gammaproteobacteria_gi_476381580-880826-913606 hallmark;refseq 39;33;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE229 prophage linear Cluster_0 Gammaproteobacteria_gi_476381791 refseq 11;7;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE122 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_476381802-0-14541 hallmark;refseq 18;15;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE122 prophage linear Cluster_2 Gammaproteobacteria_gi_476381803 hallmark;refseq 26;17;8;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE122 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_476381832-307-38919 hallmark;refseq 52;47;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE122 prophage linear Cluster_7 Gammaproteobacteria_gi_476381872 hallmark;refseq 20;17;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE125 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_476381890 hallmark;refseq 22;16;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE125 extrachromosomal linear Cluster_26 Gammaproteobacteria_gi_476381896 hallmark;refseq 23;15;7;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE125 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_476381958 hallmark;refseq 14;11;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE125 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_476381977 hallmark;refseq 38;26;10;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE167 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_476381990-684-15119 hallmark;refseq 17;14;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE167 prophage linear Cluster_2 Gammaproteobacteria_gi_476382115 refseq 16;11;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE85 extrachromosomal circular Cluster_5 Gammaproteobacteria_gi_476382130 hallmark;refseq 14;12;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE85 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_476382141 hallmark;refseq 10;5;5; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE85 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_476382180 hallmark;refseq 17;13;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE85 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_476382184 refseq 19;13;1;5 Viruses;unclassified;unclassified;unclassified;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE85 extrachromosomal linear Cluster_37 Gammaproteobacteria_gi_476382231-11961-44723 hallmark;refseq 42;37;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE85 prophage linear Cluster_0 Gammaproteobacteria_gi_476538082 refseq 20;14;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE120 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_476538085 hallmark;refseq 17;15;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE120 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_476538191 hallmark;refseq 69;32;15;22 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE120 extrachromosomal circular Cluster_48 Gammaproteobacteria_gi_476538219 hallmark;refseq 33;17;9;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE120 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_476539554-86087-117235 hallmark;refseq 41;34;2;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE120 prophage linear Cluster_7 Gammaproteobacteria_gi_478427068 hallmark;refseq 50;44;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Dublin str. UC16 extrachromosomal linear Cluster_11 Gammaproteobacteria_gi_478427106 hallmark;refseq 45;24;6;15 Viruses;unclassified phages;;;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Dublin str. UC16 extrachromosomal linear Cluster_82 Gammaproteobacteria_gi_478427124-1234-36014 hallmark;refseq 44;35;3;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Dublin str. UC16 prophage linear Cluster_0 Gammaproteobacteria_gi_478427125 hallmark;refseq;vdb 46;32;10;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Dublin str. UC16 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_478427153 hallmark;refseq 62;50;6;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Dublin str. UC16 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_478476202-4762641-4774080 noncaudo 14;8;;6 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa B136-33 prophage linear Cluster_13 Gammaproteobacteria_gi_478762516-121775-148783 hallmark;refseq 39;26;9;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H43 str. T22 prophage linear Cluster_1 Gammaproteobacteria_gi_478762663-112901-142414 hallmark;refseq 44;35;8;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H43 str. T22 prophage linear Cluster_4 Gammaproteobacteria_gi_478763186-70243-100772 hallmark;refseq 42;37;5; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H43 str. T22 prophage linear Cluster_0 Gammaproteobacteria_gi_478764066-220-61542 hallmark;refseq 70;53;15;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H43 str. T22 prophage linear Cluster_0 Gammaproteobacteria_gi_478764358-14595-38553 hallmark;refseq 34;29;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H43 str. T22 prophage linear Cluster_3 Gammaproteobacteria_gi_478764444-0-10802 hallmark;refseq 10;9;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H43 str. T22 prophage linear Cluster_0 Gammaproteobacteria_gi_478764575 hallmark;refseq 12;9;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157:H43 str. T22 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_480979561 hallmark;refseq 42;19;9;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli LCT-EC59 extrachromosomal linear Cluster_48 Gammaproteobacteria_gi_480990680 hallmark;refseq 29;13;4;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. TY-2482 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_480990696 refseq 21;17;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. TY-2482 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_480992259 hallmark;refseq 11;7;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. TY-2482 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_480992267 refseq 19;13;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. TY-2482 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_480992285 hallmark;refseq 17;16;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. TY-2482 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_480992298 refseq 28;14;8;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H4 str. TY-2482 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_480992392 refseq 7;7;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae O1 str. 2009V-1046 extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_480992456 refseq 7;7;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae O1 str. 2009V-1085 extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_480992502 refseq 7;7;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae O1 str. 2009V-1096 extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_480992618 refseq 7;7;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae O1 str. 2009V-1116 extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_480992657 refseq 8;6;1;1 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae O1 str. 2009V-1131 extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_480992705 hallmark 18;5;3;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae O1 str. 2009V-1131 extrachromosomal linear Cluster_285 Gammaproteobacteria_gi_480992793 refseq 7;6;;1 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae O1 str. 2010EL-1749 extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_480992919 hallmark 19;5;3;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae O1 str. 2010EL-1961 extrachromosomal linear Cluster_285 Gammaproteobacteria_gi_480992931 refseq 7;6;;1 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae O1 str. 2010EL-1961 extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_480993022 refseq 7;6;;1 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae O1 str. 2010EL-2010H extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_480993100 refseq 7;6;;1 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae O1 str. 2010EL-2010N extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_480993165 refseq 6;6;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae O1 str. 2010V-1014 extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_480993255 refseq 7;6;;1 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae O1 str. 2011EL-1089 extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_480993630 refseq 7;6;;1 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae O1 str. 2011EL-1133 extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_480993736 refseq 6;6;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae O1 str. 2011EL-1137 extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_480993821 refseq 7;6;;1 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae O1 str. 2011V-1021 extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_480993925 refseq 7;6;;1 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae O1 str. 3500-05 extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_480994014 refseq 7;7;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae O1 str. 3546-06 extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_480994075 refseq 7;7;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae O1 str. 3554-08 extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_480994162-44609-78298 hallmark;refseq 55;42;4;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae O1 str. 3569-08 prophage linear Cluster_3 Gammaproteobacteria_gi_480994178 refseq 10;9;1; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae O1 str. 3569-08 extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_480994255 refseq 6;6;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae O1 str. C6706 extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_480994280-953-17241 noncaudo 6;5;1; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae 2011EL-301 prophage linear Cluster_12 Gammaproteobacteria_gi_481021322 hallmark;refseq 24;15;3;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii 53264 extrachromosomal linear Cluster_24 Gammaproteobacteria_gi_481021411 hallmark 29;11;10;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii 53264 extrachromosomal linear Cluster_28 Gammaproteobacteria_gi_481021430-34307-72916 hallmark;refseq 52;25;4;23 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB1H8 prophage linear Cluster_114 Gammaproteobacteria_gi_481021442 hallmark;refseq 82;25;15;42 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB1H8 extrachromosomal linear Cluster_66 Gammaproteobacteria_gi_481021535 hallmark;refseq 47;23;11;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB405E4 extrachromosomal linear Cluster_46 Gammaproteobacteria_gi_481021697 refseq 20;15;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB4A3 extrachromosomal linear Cluster_109 Gammaproteobacteria_gi_481021706 hallmark;refseq 21;17;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB4A3 extrachromosomal linear Cluster_24 Gammaproteobacteria_gi_481021708 refseq 8;5;;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB4A3 extrachromosomal linear Cluster_109 Gammaproteobacteria_gi_481021728 hallmark;noncaudo 9;2;;7 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii AB4A3 extrachromosomal linear Cluster_232 Gammaproteobacteria_gi_481021876 hallmark 29;11;10;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii 48055 extrachromosomal linear Cluster_28 Gammaproteobacteria_gi_481021882 hallmark;refseq 24;15;3;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii 48055 extrachromosomal linear Cluster_24 Gammaproteobacteria_gi_481021883 hallmark;refseq 75;30;5;40 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;N4likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii 48055 extrachromosomal linear Cluster_523 Gammaproteobacteria_gi_481022013 hallmark;refseq 23;16;;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABIsac_ColiS extrachromosomal linear Cluster_93 Gammaproteobacteria_gi_481022112 hallmark;refseq 27;12;7;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Tunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABIsac_ColiS extrachromosomal linear Cluster_169 Gammaproteobacteria_gi_481022213 refseq 24;12;3;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABIsac_ColiR extrachromosomal linear Cluster_38 Gammaproteobacteria_gi_481022218 hallmark;refseq 21;13;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABIsac_ColiR extrachromosomal linear Cluster_24 Gammaproteobacteria_gi_481022333 hallmark;refseq 46;23;9;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli LCT-EC52 extrachromosomal linear Cluster_48 Gammaproteobacteria_gi_481022334 refseq 11;7;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli LCT-EC52 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_481023718-32135-41293 hallmark;refseq 13;12;;1 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae P-18785 prophage linear Cluster_14 Gammaproteobacteria_gi_481032910-573-14063 hallmark;refseq 12;10;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Mbandaka str. 2009K-0807 prophage linear Cluster_0 Gammaproteobacteria_gi_481032913-134352-174967 hallmark;refseq 57;49;4;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Mbandaka str. 2009K-0807 prophage linear Cluster_11 Gammaproteobacteria_gi_481032921-63683-93704 hallmark;refseq 38;34;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Mbandaka str. 2009K-0807 prophage linear Cluster_0 Gammaproteobacteria_gi_481032972-70963-117603 hallmark;refseq 57;52;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Thompson str. 2010K-1863 prophage linear Cluster_1 Gammaproteobacteria_gi_481032988-3148-18131 hallmark;refseq 17;14;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Thompson str. 2010K-1863 prophage linear Cluster_22 Gammaproteobacteria_gi_481847813-2203371-2251211 hallmark;refseq 72;46;5;21 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Raoultella Raoultella ornithinolytica B6 prophage linear Cluster_25 Gammaproteobacteria_gi_482731795-13697-59971 hallmark;refseq 73;34;11;28 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas monteilii QM prophage linear Cluster_148 Gammaproteobacteria_gi_482734287 refseq 19;11;1;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas monteilii QM extrachromosomal linear Cluster_264 Gammaproteobacteria_gi_482802627 hallmark;refseq 15;11;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis 2330 extrachromosomal linear Cluster_18 Gammaproteobacteria_gi_482803187 hallmark;refseq 37;36;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis 2330 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_482815871-57-27210 refseq 28;24;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis 2330 prophage linear Cluster_9 Gammaproteobacteria_gi_482816921 hallmark;refseq 38;37;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis 2504 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_482817117 refseq 13;8;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis 2504 extrachromosomal linear Cluster_27 Gammaproteobacteria_gi_482817596 hallmark;refseq 14;11;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis 2504 extrachromosomal linear Cluster_18 Gammaproteobacteria_gi_482818819 hallmark;refseq 14;11;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis 2506 extrachromosomal linear Cluster_18 Gammaproteobacteria_gi_482819335 refseq 13;8;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis 2506 extrachromosomal linear Cluster_27 Gammaproteobacteria_gi_482825750-5806-32959 refseq 28;24;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis 30017 prophage linear Cluster_9 Gammaproteobacteria_gi_482826162 refseq 13;8;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis 30017 extrachromosomal linear Cluster_27 Gammaproteobacteria_gi_482826182 hallmark;refseq 37;36;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis 30017 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_482833097 hallmark;refseq 37;36;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis 42013 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_482833163 refseq 14;8;1;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis 42013 extrachromosomal linear Cluster_27 Gammaproteobacteria_gi_482844453 refseq 7;5;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis 42091 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_482844505 refseq 13;8;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis 42091 extrachromosomal linear Cluster_27 Gammaproteobacteria_gi_482844666 hallmark;refseq 37;36;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis 42091 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_482851909 refseq 13;8;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis 7 extrachromosomal linear Cluster_27 Gammaproteobacteria_gi_482851993-57-27210 refseq 28;24;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis 7 prophage linear Cluster_9 Gammaproteobacteria_gi_482851999 hallmark;refseq 37;36;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis 7 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_482856375 hallmark;refseq 23;22;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis 735 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_482856998 refseq 22;20;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis 780441 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_482857061 hallmark;refseq 37;36;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis 780441 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_482857294 refseq 13;8;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis 780441 extrachromosomal linear Cluster_27 Gammaproteobacteria_gi_482859274 hallmark;refseq 14;11;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis 91 extrachromosomal linear Cluster_18 Gammaproteobacteria_gi_482859341 refseq 13;8;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis 91 extrachromosomal linear Cluster_27 Gammaproteobacteria_gi_482859488 hallmark;refseq 38;37;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis 91 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_482859634 refseq 23;21;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis 91 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_482862645 refseq 14;12;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis A1956001 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_482862761 refseq 13;8;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis A1956001 extrachromosomal linear Cluster_27 Gammaproteobacteria_gi_482874425 hallmark;refseq 37;36;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis C1976001 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_482875039 refseq 21;19;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis C1976001 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_482875091 hallmark;refseq 15;11;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis C1976001 extrachromosomal linear Cluster_18 Gammaproteobacteria_gi_482875266 refseq 15;9;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis C1976001 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_482875579 refseq 12;7;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis C1989001 extrachromosomal linear Cluster_27 Gammaproteobacteria_gi_482875606 refseq 20;18;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis C1989001 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_482876419 hallmark;refseq 35;34;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis C1989001 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_482884694-1738404-1773511 hallmark;refseq 50;49;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Mannheimia Mannheimia haemolytica M42548 prophage linear Cluster_0 Gammaproteobacteria_gi_482902549-1941706-1992396 hallmark;refseq 60;58;2; Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. U288 prophage linear Cluster_1 Gammaproteobacteria_gi_483051358-8184-42493 hallmark;refseq;vdb 45;27;2;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Stenotrophomonas Stenotrophomonas maltophilia S028 prophage linear Cluster_0 Gammaproteobacteria_gi_483055284 hallmark;refseq 56;26;;30 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Stenotrophomonas Stenotrophomonas maltophilia S028 extrachromosomal linear Cluster_64 Gammaproteobacteria_gi_483081963-8415-16378 hallmark;noncaudo 16;7;;9 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas mendocina S5.2 prophage linear Cluster_14 Gammaproteobacteria_gi_483092688 hallmark;vdb 42;10;12;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Methylococcales;Methylococcaceae;Methylococcus Methylococcus capsulatus str. Texas = ATCC 19069 extrachromosomal linear Cluster_168 Gammaproteobacteria_gi_483282499-203195-232726 hallmark;refseq 42;34;5;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;unknown Enterobacteriaceae bacterium LSJC7 prophage linear Cluster_0 Gammaproteobacteria_gi_483283219 hallmark;refseq 58;48;1;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;unknown Enterobacteriaceae bacterium LSJC7 extrachromosomal linear Cluster_47 Gammaproteobacteria_gi_483288494 refseq 16;9;2;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Thiotrichales;Piscirickettsiaceae;Piscirickettsia Piscirickettsia salmonis LF-89 = ATCC VR-1361 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_483305615-4369-36163 hallmark;refseq 41;31;5;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Enterobacter Enterobacter cloacae subsp. cloacae 08XA1 prophage linear Cluster_0 Gammaproteobacteria_gi_483305662 hallmark;refseq 33;25;2;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Enterobacter Enterobacter cloacae subsp. cloacae 08XA1 extrachromosomal linear Cluster_23 Gammaproteobacteria_gi_483305691 hallmark;refseq 30;25;;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Enterobacter Enterobacter cloacae subsp. cloacae 08XA1 extrachromosomal linear Cluster_25 Gammaproteobacteria_gi_483306617-103-13813 hallmark;refseq 12;10;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Enterobacter Enterobacter cloacae subsp. cloacae 08XA1 prophage linear Cluster_0 Gammaproteobacteria_gi_483306993-249971-290685 hallmark;refseq 53;42;4;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Enterobacter Enterobacter cloacae subsp. cloacae 08XA1 prophage linear Cluster_4 Gammaproteobacteria_gi_483306993-349259-385289 hallmark;refseq 43;27;3;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Enterobacter Enterobacter cloacae subsp. cloacae 08XA1 prophage linear Cluster_63 Gammaproteobacteria_gi_483307261 hallmark;refseq 19;15;1;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Enterobacter Enterobacter cloacae subsp. cloacae 08XA1 extrachromosomal linear Cluster_23 Gammaproteobacteria_gi_483314106 hallmark;vdb 14;6;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter sp. TG27347 extrachromosomal linear Cluster_53 Gammaproteobacteria_gi_483324919 hallmark;refseq 53;22;3;28 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter nosocomialis TG19596 extrachromosomal linear Cluster_24 Gammaproteobacteria_gi_483370937 hallmark;refseq 58;27;8;23 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter johnsonii TG19625 extrachromosomal linear Cluster_24 Gammaproteobacteria_gi_483372201 hallmark 23;9;4;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter johnsonii TG19625 extrachromosomal linear Cluster_496 Gammaproteobacteria_gi_483378173 hallmark;refseq 46;27;3;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter junii TG19608 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_483382567 refseq 7;6;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis CMCC125002 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_483386424 refseq 31;24;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis CMCC125002 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_483389851 hallmark;refseq 18;8;2;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter lwoffii TG19636 extrachromosomal linear Cluster_114 Gammaproteobacteria_gi_483393696 hallmark 52;18;4;30 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Spbetalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter pittii TG6411 extrachromosomal circular Cluster_114 Gammaproteobacteria_gi_483397216 noncaudo 4;2;;2 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter radioresistens TG02010 extrachromosomal circular Cluster_231 Gammaproteobacteria_gi_483397453 hallmark;refseq 50;23;13;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Gallibacterium Gallibacterium anatis DSM 16844 = F 149 extrachromosomal linear Cluster_21 Gammaproteobacteria_gi_483397968 hallmark;refseq 35;28;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Gallibacterium Gallibacterium anatis DSM 16844 = F 149 extrachromosomal linear Cluster_403 Gammaproteobacteria_gi_483399511 hallmark;refseq 31;31;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis CMCC125002 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_483400214 hallmark 65;23;10;32 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Tunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter schindleri TG19614 extrachromosomal linear Cluster_210 Gammaproteobacteria_gi_483400773 hallmark;refseq 27;16;2;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Gallibacterium Gallibacterium anatis DSM 16844 = F 149 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_483401142 hallmark;refseq 14;11;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis CMCC125002 extrachromosomal linear Cluster_18 Gammaproteobacteria_gi_483409929 refseq 13;8;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis CMCC125002 extrachromosomal linear Cluster_27 Gammaproteobacteria_gi_483428612 hallmark;refseq 22;9;4;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter sp. 528 extrachromosomal linear Cluster_53 Gammaproteobacteria_gi_483431109 hallmark;refseq 43;14;11;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter sp. TG19627 extrachromosomal linear Cluster_28 Gammaproteobacteria_gi_483432914 hallmark;refseq 31;13;1;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter sp. TG19627 extrachromosomal linear Cluster_114 Gammaproteobacteria_gi_483434444 hallmark 67;17;16;34 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter sp. TG2027 extrachromosomal linear Cluster_53 Gammaproteobacteria_gi_483436862 noncaudo 8;2;1;5 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter sp. TG2027 extrachromosomal linear Cluster_165 Gammaproteobacteria_gi_483522696-691422-699558 noncaudo 13;6;;7 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Aeromonadales;Aeromonadaceae;Aeromonas Aeromonas hydrophila SNUFPC-A8 prophage linear Cluster_266 Gammaproteobacteria_gi_483524538 hallmark;refseq 49;32;7;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Aeromonadales;Aeromonadaceae;Aeromonas Aeromonas hydrophila SNUFPC-A8 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_483525123 noncaudo 11;3;2;6 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Aeromonadales;Aeromonadaceae;Aeromonas Aeromonas hydrophila SNUFPC-A8 extrachromosomal linear Cluster_198 Gammaproteobacteria_gi_483525259 noncaudo;vdb 5;1;1;3 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Aeromonadales;Aeromonadaceae;Aeromonas Aeromonas hydrophila SNUFPC-A8 extrachromosomal linear Cluster_231 Gammaproteobacteria_gi_483599446 hallmark;refseq 29;23;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Citrobacter Citrobacter freundii str. ballerup 7851/39 extrachromosomal linear Cluster_18 Gammaproteobacteria_gi_483599667-0-12816 hallmark;refseq 14;10;1;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Citrobacter Citrobacter freundii str. ballerup 7851/39 prophage linear Cluster_11 Gammaproteobacteria_gi_483600521 hallmark;refseq 30;19;6;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Citrobacter Citrobacter freundii str. ballerup 7851/39 extrachromosomal linear Cluster_347 Gammaproteobacteria_gi_483600969 hallmark;refseq 23;17;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Citrobacter Citrobacter freundii str. ballerup 7851/39 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_483601289-11535-40961 hallmark;refseq 32;24;4;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Citrobacter Citrobacter freundii str. ballerup 7851/39 prophage linear Cluster_0 Gammaproteobacteria_gi_483601989 refseq 10;7;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Citrobacter Citrobacter freundii str. ballerup 7851/39 extrachromosomal linear Cluster_47 Gammaproteobacteria_gi_483602262 hallmark;refseq 63;47;8;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Citrobacter Citrobacter freundii str. ballerup 7851/39 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_483603456 hallmark 21;8;5;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Citrobacter Citrobacter freundii str. ballerup 7851/39 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_483729537 hallmark 29;8;4;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;unknown;unknown;unknown gamma proteobacterium SCGC AB-629-P17 extrachromosomal linear Cluster_359 Gammaproteobacteria_gi_483771549 hallmark;refseq 31;22;5;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia enterocolitica NFO extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_483772185-0-34766 hallmark;refseq 52;29;4;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia enterocolitica NFO prophage linear Cluster_25 Gammaproteobacteria_gi_483772541 hallmark;refseq 29;21;5;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia enterocolitica NFO extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_483788044-139879-146671 noncaudo 10;4;1;5 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Alteromonadales;unknown;Teredinibacter Teredinibacter turnerae T0609 prophage linear Cluster_130 Gammaproteobacteria_gi_483858622-0-31154 hallmark;refseq 35;19;8;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas fluorescens Wayne1 prophage linear Cluster_0 Gammaproteobacteria_gi_483859115 hallmark;refseq 23;17;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas fluorescens Wayne1 extrachromosomal linear Cluster_7 Gammaproteobacteria_gi_483880744 hallmark;refseq 43;27;4;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas fluorescens Wayne1 extrachromosomal linear Cluster_7 Gammaproteobacteria_gi_483886443 hallmark;refseq 45;21;15;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis CMCC348002 extrachromosomal circular Cluster_367 Gammaproteobacteria_gi_483890777 hallmark 22;8;9;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas putida B001 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_483894799 hallmark;refseq 91;37;14;40 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas putida B001 extrachromosomal linear Cluster_148 Gammaproteobacteria_gi_483897206 hallmark;vdb 19;5;8;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas putida B001 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_483898618 noncaudo 10;4;;6 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas putida B001 extrachromosomal linear Cluster_14 Gammaproteobacteria_gi_483909195 refseq 13;8;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis CMCC348002 extrachromosomal linear Cluster_27 Gammaproteobacteria_gi_483910244-69452-72819 noncaudo 8;4;;4 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cyclitrophicus 1F53 prophage linear Cluster_14 Gammaproteobacteria_gi_483911551-133811-137112 noncaudo 7;4;2;1 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cyclitrophicus 1F53 prophage linear Cluster_14 Gammaproteobacteria_gi_483914168 hallmark;refseq 47;22;2;23 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cyclitrophicus 1F97 extrachromosomal linear Cluster_419 Gammaproteobacteria_gi_483916596 hallmark;refseq 48;26;4;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cyclitrophicus 1F97 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_483919455 hallmark;refseq 52;26;8;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cyclitrophicus 1F97 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_483921849-2046-8005 hallmark;refseq 11;9;;2 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cyclitrophicus 1F97 prophage linear Cluster_14 Gammaproteobacteria_gi_483944692-12830-16461 noncaudo 8;4;;4 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cyclitrophicus 1F175 prophage linear Cluster_14 Gammaproteobacteria_gi_483949317 refseq 6;4;;2 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cyclitrophicus 1F175 extrachromosomal linear Cluster_265 Gammaproteobacteria_gi_483954156-57319-65960 hallmark;refseq 13;8;1;4 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cyclitrophicus 1F273 prophage linear Cluster_14 Gammaproteobacteria_gi_483959051 hallmark;refseq 15;8;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cyclitrophicus 1F289 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_483959591 hallmark;refseq 41;21;10;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cyclitrophicus FF75 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_483959629-12224-22748 noncaudo 13;7;2;4 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cyclitrophicus FF75 prophage linear Cluster_130 Gammaproteobacteria_gi_483959629-525-12222 noncaudo 21;3;2;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cyclitrophicus FF75 prophage linear Cluster_215 Gammaproteobacteria_gi_483962047-107418-115844 noncaudo 13;6;4;3 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cyclitrophicus ZF28 prophage linear Cluster_14 Gammaproteobacteria_gi_483962546 noncaudo 8;4;;4 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cyclitrophicus ZF30 extrachromosomal linear Cluster_14 Gammaproteobacteria_gi_483962623 refseq 6;4;;2 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cyclitrophicus ZF30 extrachromosomal linear Cluster_265 Gammaproteobacteria_gi_483963222-0-11682 noncaudo 15;10;;5 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cyclitrophicus ZF65 prophage linear Cluster_14 Gammaproteobacteria_gi_483965295-7766-16559 noncaudo 17;4;;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cyclitrophicus ZF207 prophage linear Cluster_607 Gammaproteobacteria_gi_483965540-13444-19604 noncaudo 10;3;1;6 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cyclitrophicus ZF207 prophage linear Cluster_265 Gammaproteobacteria_gi_483966973 hallmark;refseq 14;8;2;4 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cyclitrophicus ZF264 extrachromosomal linear Cluster_14 Gammaproteobacteria_gi_483966992 refseq 6;5;1; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cyclitrophicus ZF264 extrachromosomal linear Cluster_265 Gammaproteobacteria_gi_483968141 noncaudo 9;4;;5 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio splendidus 12F01 extrachromosomal linear Cluster_14 Gammaproteobacteria_gi_483968824 hallmark 72;20;10;42 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter radioresistens DSM 6976 = NBRC 102413 = CIP 103788 extrachromosomal linear Cluster_210 Gammaproteobacteria_gi_483969493 refseq 12;11;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis CMCC49003 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_483969849 hallmark;refseq 15;14;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis CMCC49003 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_483970058 hallmark;refseq 34;19;2;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter calcoaceticus DSM 30006 = CIP 81.8 extrachromosomal linear Cluster_24 Gammaproteobacteria_gi_483970258 hallmark 18;7;1;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter calcoaceticus DSM 30006 = CIP 81.8 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_483970284 hallmark;refseq 21;10;1;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter calcoaceticus DSM 30006 = CIP 81.8 extrachromosomal linear Cluster_24 Gammaproteobacteria_gi_483971012 refseq 23;20;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis CMCC49003 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_483971870 refseq 14;8;1;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis CMCC49003 extrachromosomal linear Cluster_27 Gammaproteobacteria_gi_483972307 hallmark;refseq 41;19;7;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter genomosp. 3 str. DSM 9306 extrachromosomal linear Cluster_28 Gammaproteobacteria_gi_483972336 hallmark;refseq 34;16;6;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter genomosp. 3 str. DSM 9306 extrachromosomal linear Cluster_122 Gammaproteobacteria_gi_483972369 hallmark;refseq 28;16;2;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter genomosp. 3 str. DSM 9306 extrachromosomal linear Cluster_341 Gammaproteobacteria_gi_483972425 hallmark;refseq 34;21;;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter genomosp. 3 str. DSM 9306 extrachromosomal linear Cluster_24 Gammaproteobacteria_gi_483972458 refseq 15;7;5;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter genomosp. 3 str. DSM 9306 extrachromosomal linear Cluster_109 Gammaproteobacteria_gi_483973732-0-11686 hallmark;vdb 20;7;5;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter genomosp. 13TU str. NCTC 8102 prophage linear Cluster_38 Gammaproteobacteria_gi_483973984 refseq 13;8;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter genomosp. 13TU str. NCTC 8102 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_483974002 refseq 27;10;2;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter genomosp. 13TU str. NCTC 8102 extrachromosomal linear Cluster_114 Gammaproteobacteria_gi_483976866 hallmark;refseq 64;28;13;23 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter lwoffii NCTC 5866 = CIP 64.10 extrachromosomal linear Cluster_519 Gammaproteobacteria_gi_483976922-8433-40099 hallmark;refseq 39;16;4;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter lwoffii NCTC 5866 = CIP 64.10 prophage linear Cluster_210 Gammaproteobacteria_gi_483976931 hallmark;refseq 44;22;4;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter lwoffii NCTC 5866 = CIP 64.10 extrachromosomal linear Cluster_24 Gammaproteobacteria_gi_483978219 refseq 16;11;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis CMCC64001 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_483978682 hallmark;refseq 22;22;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis CMCC64001 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_483978863 hallmark;refseq 15;11;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis CMCC64001 extrachromosomal linear Cluster_18 Gammaproteobacteria_gi_483979228-0-14190 hallmark;refseq 13;12;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella oxytoca 11492-1 prophage linear Cluster_4 Gammaproteobacteria_gi_483979249 refseq 7;6;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis CMCC64001 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_483979359-0-36411 hallmark;refseq 45;28;7;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella oxytoca 11492-1 prophage linear Cluster_21 Gammaproteobacteria_gi_483979653 hallmark;refseq 68;47;13;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella oxytoca 11492-1 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_483981084-270863-280412 hallmark;refseq 13;10;;3 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio parahaemolyticus SNUVpS-1 prophage linear Cluster_14 Gammaproteobacteria_gi_483993382-46682-71083 hallmark;refseq 34;22;7;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas sp. PAMC 26793 prophage linear Cluster_85 Gammaproteobacteria_gi_483995553 hallmark;refseq 76;41;8;27 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;unknown;unknown;unknown gamma proteobacterium WG36 extrachromosomal linear Cluster_54 Gammaproteobacteria_gi_483995830 hallmark;refseq 21;9;7;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;unknown;unknown;unknown gamma proteobacterium WG36 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_483995901-2499-13136 hallmark;refseq 10;7;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;unknown;unknown;unknown gamma proteobacterium WG36 prophage linear Cluster_0 Gammaproteobacteria_gi_483995916 hallmark;refseq 15;14;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;unknown;unknown;unknown gamma proteobacterium WG36 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_483995966 hallmark;refseq 15;11;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;unknown;unknown;unknown gamma proteobacterium WG36 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_483997878 refseq 13;8;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis CMCC8211 extrachromosomal linear Cluster_27 Gammaproteobacteria_gi_483999094 hallmark;refseq 12;9;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Actinobacillus Actinobacillus capsulatus DSM 19761 extrachromosomal linear Cluster_100 Gammaproteobacteria_gi_484003973 hallmark;refseq 55;29;6;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas nitroreducens TX1 extrachromosomal linear Cluster_164 Gammaproteobacteria_gi_484006198-122634-134526 hallmark;refseq 17;14;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Alteromonadales;Pseudoalteromonadaceae;Algicola Algicola sagamiensis DSM 14643 prophage linear Cluster_85 Gammaproteobacteria_gi_484006450 hallmark;refseq 34;17;6;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Alteromonadales;Pseudoalteromonadaceae;Algicola Algicola sagamiensis DSM 14643 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_484006477 hallmark;refseq 16;7;3;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Alteromonadales;Pseudoalteromonadaceae;Algicola Algicola sagamiensis DSM 14643 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_484006485 refseq;vdb 24;7;4;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Alteromonadales;Pseudoalteromonadaceae;Algicola Algicola sagamiensis DSM 14643 extrachromosomal linear Cluster_17 Gammaproteobacteria_gi_484014910 refseq 9;8;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis CMCC87001 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_484016469 refseq 21;18;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis CMCC87001 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_484017241 noncaudo 12;3;1;8 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis CMCC87001 extrachromosomal linear Cluster_51 Gammaproteobacteria_gi_484017359 refseq 13;8;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis CMCC87001 extrachromosomal linear Cluster_27 Gammaproteobacteria_gi_484023370 hallmark;refseq 25;25;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis CMCC91090 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_484024261 refseq 12;11;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis CMCC91090 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_484025176 refseq 20;17;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;T4likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis CMCC91090 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_484027889-0-33167 hallmark;refseq 41;26;5;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Proteus Proteus mirabilis C05028 prophage linear Cluster_4 Gammaproteobacteria_gi_484030090 hallmark;refseq 93;34;15;44 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Punalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio sp. 712i1 extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_484030366 refseq 22;10;4;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio sp. 712i1 extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_484030417 noncaudo 12;5;;7 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio sp. 712i1 extrachromosomal linear Cluster_215 Gammaproteobacteria_gi_484030541 refseq 8;7;;1 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio sp. 712i1 extrachromosomal linear Cluster_14 Gammaproteobacteria_gi_484030545 hallmark;refseq 10;7;2;1 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio sp. 712i1 extrachromosomal linear Cluster_14 Gammaproteobacteria_gi_484032064 refseq 9;8;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis CMCC93014 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_484033710 refseq 21;18;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis CMCC93014 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_484034219-179174-200971 noncaudo 26;11;5;10 Viruses;ssDNA viruses;unknown;Inoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Stenotrophomonas Stenotrophomonas maltophilia PML168 prophage linear Cluster_43 Gammaproteobacteria_gi_484034540 hallmark;refseq 17;17;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis CMCC93014 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_484035577 refseq 20;8;7;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. actinidiae ICMP 18744 extrachromosomal linear Cluster_71 Gammaproteobacteria_gi_484035659 hallmark;refseq 13;8;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. actinidiae ICMP 18744 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_484063187-102870-113757 hallmark;noncaudo 14;6;3;5 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Oceanospirillales;Halomonadaceae;Halomonas Halomonas zhanjiangensis DSM 21076 prophage linear Cluster_36 Gammaproteobacteria_gi_484064829 hallmark;refseq 65;24;7;34 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas axonopodis pv. glycines str. 12-2 extrachromosomal linear Cluster_177 Gammaproteobacteria_gi_484064910 hallmark;refseq 16;13;;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas axonopodis pv. glycines str. 12-2 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_484067539-186646-225375 hallmark;refseq 49;34;4;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa LCT-PA102 prophage linear Cluster_0 Gammaproteobacteria_gi_484067609-0-4307 noncaudo 7;4;1;2 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa LCT-PA102 prophage linear Cluster_13 Gammaproteobacteria_gi_484067791 refseq 14;11;;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa LCT-PA102 extrachromosomal linear Cluster_120 Gammaproteobacteria_gi_484069094 hallmark;refseq 19;15;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Candidatus Hamiltonella Candidatus Hamiltonella defensa MED (Bemisia tabaci) extrachromosomal linear Cluster_11 Gammaproteobacteria_gi_484069790 hallmark;noncaudo 8;4;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Tunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Candidatus Hamiltonella Candidatus Hamiltonella defensa MED (Bemisia tabaci) extrachromosomal linear Cluster_101 Gammaproteobacteria_gi_484071342 hallmark;refseq 49;22;13;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. actinidiae ICMP 9853 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_484071893 refseq 14;7;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. actinidiae ICMP 9853 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_484073426 refseq 30;11;9;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. actinidiae ICMP 18708 extrachromosomal linear Cluster_71 Gammaproteobacteria_gi_484073819 hallmark;refseq 15;8;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. actinidiae ICMP 18708 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_484075302 refseq 30;11;9;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. actinidiae ICMP 18800 extrachromosomal linear Cluster_71 Gammaproteobacteria_gi_484075613 hallmark;refseq 15;8;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. actinidiae ICMP 18800 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_484079467 refseq 30;11;9;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. actinidiae TP1 extrachromosomal linear Cluster_71 Gammaproteobacteria_gi_484079806 hallmark 17;7;4;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. actinidiae TP1 extrachromosomal linear Cluster_415 Gammaproteobacteria_gi_484079810 hallmark;refseq 15;8;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. actinidiae TP1 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_484081337 hallmark;refseq 27;27;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis D1982001 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_484081420 refseq 30;11;9;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. actinidiae TP6-1 extrachromosomal linear Cluster_71 Gammaproteobacteria_gi_484081703 hallmark;refseq 15;8;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. actinidiae TP6-1 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_484081789 refseq 13;8;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis D1982001 extrachromosomal linear Cluster_27 Gammaproteobacteria_gi_484083113 hallmark;refseq 11;9;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas arboricola pv. juglandis str. NCPPB 1447 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_484083662 hallmark 66;9;16;41 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Oceanospirillales;Halomonadaceae;Halomonas Halomonas lutea DSM 23508 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_484090396 refseq 13;8;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis biovar Antiqua str. E1979001 extrachromosomal linear Cluster_27 Gammaproteobacteria_gi_484091935 refseq 10;5;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis biovar Antiqua str. E1979001 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_484093453 refseq 19;17;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis biovar Antiqua str. E1979001 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_484093472 hallmark;refseq 37;36;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis biovar Antiqua str. E1979001 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_484100401 refseq 30;11;9;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. actinidiae ICMP 19455 extrachromosomal linear Cluster_71 Gammaproteobacteria_gi_484100711 hallmark;refseq 15;8;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. actinidiae ICMP 19455 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_484100856-334018-351432 hallmark;refseq 19;16;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Serratia Serratia marcescens LCT-SM213 prophage linear Cluster_47 Gammaproteobacteria_gi_484102684 refseq 30;11;9;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. actinidiae ICMP 19439 extrachromosomal linear Cluster_71 Gammaproteobacteria_gi_484102891 hallmark;refseq 15;8;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. actinidiae ICMP 19439 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_484105649-192443-227309 hallmark;refseq 49;36;6;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Dickeya Dickeya zeae ZJU1202 prophage linear Cluster_0 Gammaproteobacteria_gi_484105653-380700-412400 hallmark;refseq 45;33;6;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Dickeya Dickeya zeae ZJU1202 prophage linear Cluster_21 Gammaproteobacteria_gi_484105672-90012-113280 hallmark;refseq 30;21;3;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Dickeya Dickeya zeae ZJU1202 prophage linear Cluster_0 Gammaproteobacteria_gi_484106788-16595-21965 refseq 10;7;;3 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas campestris JX prophage linear Cluster_43 Gammaproteobacteria_gi_484107058-41221-53982 hallmark;refseq 18;15;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas sp. CBZ-4 prophage linear Cluster_85 Gammaproteobacteria_gi_484107677 hallmark;refseq 26;16;3;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae LZ extrachromosomal linear Cluster_148 Gammaproteobacteria_gi_484115496 hallmark;refseq 39;38;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis G1996006 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_484115889-0-22543 hallmark;vdb 26;11;7;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas tolaasii PMS117 prophage linear Cluster_47 Gammaproteobacteria_gi_484115905-58718-83348 hallmark;refseq 35;23;7;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas tolaasii PMS117 prophage linear Cluster_85 Gammaproteobacteria_gi_484116269 refseq 13;8;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis G1996006 extrachromosomal linear Cluster_27 Gammaproteobacteria_gi_484116538-57-27210 refseq 28;24;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis G1996006 prophage linear Cluster_9 Gammaproteobacteria_gi_484116553 refseq 21;11;6;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis G1996006 extrachromosomal linear Cluster_367 Gammaproteobacteria_gi_484117090 hallmark;refseq 39;38;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis G1996010 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_484118100-57-27210 refseq 28;24;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis G1996010 prophage linear Cluster_9 Gammaproteobacteria_gi_484118460-122301-130046 hallmark;noncaudo 11;5;;6 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Aeromonadales;Aeromonadaceae;Aeromonas Aeromonas hydrophila 173 prophage linear Cluster_231 Gammaproteobacteria_gi_484118673 hallmark;refseq 55;32;3;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. tabaci str. 6605 extrachromosomal linear Cluster_64 Gammaproteobacteria_gi_484118852-278124-310736 hallmark;refseq 51;40;2;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Aeromonadales;Aeromonadaceae;Aeromonas Aeromonas hydrophila 187 prophage linear Cluster_0 Gammaproteobacteria_gi_484119068 refseq 13;8;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis G1996010 extrachromosomal linear Cluster_27 Gammaproteobacteria_gi_484119107 refseq 24;14;6;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis G1996010 extrachromosomal linear Cluster_367 Gammaproteobacteria_gi_484119283-119079-127388 noncaudo 12;6;;6 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Aeromonadales;Aeromonadaceae;Aeromonas Aeromonas hydrophila 259 prophage linear Cluster_266 Gammaproteobacteria_gi_484119734 noncaudo 16;2;2;12 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas fluorescens NZ011 extrachromosomal linear Cluster_14 Gammaproteobacteria_gi_484119766-314-18098 refseq 21;18;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis G8786 prophage linear Cluster_9 Gammaproteobacteria_gi_484121223 refseq 14;8;1;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis G8786 extrachromosomal linear Cluster_27 Gammaproteobacteria_gi_484121911 hallmark;refseq 35;34;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis G8786 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_484122430 refseq 11;9;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;T4likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis G8786 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_484123164 hallmark;refseq 46;21;17;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Avibacterium Avibacterium paragallinarum 221 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_484123177 hallmark;refseq 67;48;4;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Avibacterium Avibacterium paragallinarum 221 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_484123224 hallmark;refseq 14;12;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Avibacterium Avibacterium paragallinarum 221 extrachromosomal linear Cluster_44 Gammaproteobacteria_gi_484128998 hallmark;refseq 15;11;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis H1959004 extrachromosomal linear Cluster_18 Gammaproteobacteria_gi_484131016 refseq 13;8;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis H1959004 extrachromosomal linear Cluster_27 Gammaproteobacteria_gi_484131041 hallmark;refseq 36;35;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis H1959004 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_484137980 hallmark 57;15;3;39 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio harveyi AOD131 extrachromosomal linear Cluster_419 Gammaproteobacteria_gi_484138016 hallmark;refseq 8;7;;1 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio harveyi AOD131 extrachromosomal linear Cluster_14 Gammaproteobacteria_gi_484139971-89330-100698 noncaudo 17;3;1;13 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Alteromonadales;Pseudoalteromonadaceae;Pseudoalteromonas Pseudoalteromonas ruthenica CP76 prophage linear Cluster_560 Gammaproteobacteria_gi_484142617-0-35010 hallmark;refseq 46;34;3;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Proteus Proteus mirabilis PR03 prophage linear Cluster_3 Gammaproteobacteria_gi_484145999-163687-176619 hallmark;refseq 19;14;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas veronii 1YdBTEX2 prophage linear Cluster_85 Gammaproteobacteria_gi_484157103-33249-64320 hallmark;refseq 51;41;3;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae HSL4 prophage linear Cluster_247 Gammaproteobacteria_gi_484157113-91823-135974 hallmark;refseq 44;33;4;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae HSL4 prophage linear Cluster_4 Gammaproteobacteria_gi_484164396-900178-919805 hallmark;refseq 24;19;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Serratia Serratia sp. S4 prophage linear Cluster_0 Gammaproteobacteria_gi_484171492 hallmark;refseq 14;11;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis K11973002 extrachromosomal linear Cluster_18 Gammaproteobacteria_gi_484171806 refseq 8;6;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis K11973002 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_484173558 refseq 20;18;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis K11973002 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_484173622 hallmark;refseq 32;31;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis K11973002 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_484175739-57780-94984 hallmark;refseq 42;25;6;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae 12-3578 prophage linear Cluster_0 Gammaproteobacteria_gi_484175748 hallmark;refseq 9;7;;2 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae 12-3578 extrachromosomal circular Cluster_198 Gammaproteobacteria_gi_484176891 hallmark 11;5;;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Yualikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas fuscovaginae SE-1 extrachromosomal linear Cluster_592 Gammaproteobacteria_gi_484176963 hallmark;refseq 60;28;5;27 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas fuscovaginae SE-1 extrachromosomal linear Cluster_137 Gammaproteobacteria_gi_484176967 refseq 17;15;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas fuscovaginae SE-1 extrachromosomal linear Cluster_137 Gammaproteobacteria_gi_484177721 hallmark;refseq 71;44;;27 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa XMG extrachromosomal circular Cluster_7 Gammaproteobacteria_gi_484177742-72-18753 hallmark;refseq 25;18;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas fuscovaginae SE-1 prophage linear Cluster_85 Gammaproteobacteria_gi_484178168-10892-26897 hallmark;refseq 22;13;4;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa XMG prophage linear Cluster_47 Gammaproteobacteria_gi_484178383 hallmark 50;14;4;32 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas sp. SHU199 extrachromosomal linear Cluster_298 Gammaproteobacteria_gi_484183927-5783-32926 refseq 29;25;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis MGJZ11 prophage linear Cluster_9 Gammaproteobacteria_gi_484184954 hallmark;refseq 37;36;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis MGJZ11 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_484185142 hallmark;refseq 15;11;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis MGJZ11 extrachromosomal linear Cluster_18 Gammaproteobacteria_gi_484185823 hallmark 16;7;4;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Aliivibrio Aliivibrio logei 5S-186 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_484185837 hallmark;refseq 36;20;5;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Aliivibrio Aliivibrio logei 5S-186 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_484185879 refseq 13;8;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis MGJZ11 extrachromosomal linear Cluster_27 Gammaproteobacteria_gi_484191339-9351-13113 noncaudo 6;5;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio ordalii FF-167 prophage linear Cluster_303 Gammaproteobacteria_gi_484191381 hallmark;refseq 19;12;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio ordalii FF-167 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_484192947 hallmark;refseq 23;19;1;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio ordalii FF-93 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_484193544-8003-16875 hallmark;noncaudo 13;7;1;5 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio ordalii FS-144 prophage linear Cluster_14 Gammaproteobacteria_gi_484194109-8091-16963 hallmark;noncaudo 13;7;1;5 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio ordalii 12B09 prophage linear Cluster_14 Gammaproteobacteria_gi_484194864-20-19517 hallmark;noncaudo 25;14;1;10 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio genomosp. F6 str. FF-238 prophage linear Cluster_14 Gammaproteobacteria_gi_484196235 hallmark 57;14;5;38 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio crassostreae 9CS106 extrachromosomal circular Cluster_311 Gammaproteobacteria_gi_484197915-9196-15945 hallmark;refseq 10;8;;2 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio crassostreae 9ZC77 prophage linear Cluster_14 Gammaproteobacteria_gi_484198922-37093-43222 hallmark;refseq 10;9;;1 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio crassostreae ZF-91 prophage linear Cluster_14 Gammaproteobacteria_gi_484201522 hallmark 20;5;4;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio splendidus FF-6 extrachromosomal circular Cluster_1 Gammaproteobacteria_gi_484202349-16948-55678 hallmark;refseq 42;21;4;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio splendidus 1F-157 prophage linear Cluster_300 Gammaproteobacteria_gi_484203171 noncaudo 6;2;2;2 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio splendidus 1F-157 extrachromosomal circular Cluster_198 Gammaproteobacteria_gi_484204727 hallmark;refseq 31;22;5;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio tasmaniensis 1F-187 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_484206216 hallmark 23;9;3;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio tasmaniensis 1F-155 extrachromosomal linear Cluster_300 Gammaproteobacteria_gi_484206698 hallmark;refseq 49;44;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Aggregatibacter Aggregatibacter actinomycetemcomitans DSM 8324 extrachromosomal linear Cluster_288 Gammaproteobacteria_gi_484207440-64460-74207 hallmark;noncaudo 15;9;1;5 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio tasmaniensis 1F-267 prophage linear Cluster_14 Gammaproteobacteria_gi_484208943-7651-19335 hallmark 14;4;4;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio tasmaniensis ZS-17 prophage linear Cluster_0 Gammaproteobacteria_gi_484208983-0-62434 hallmark 35;12;4;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Thiotrichales;Thiotrichaceae;Thiothrix Thiothrix disciformis DSM 14473 prophage linear Cluster_0 Gammaproteobacteria_gi_484209042 hallmark 12;3;;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Thiotrichales;Thiotrichaceae;Thiothrix Thiothrix disciformis DSM 14473 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_484209879-61125-70091 hallmark;noncaudo 14;9;;5 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas campestris pv. musacearum NCPPB 2005 prophage linear Cluster_153 Gammaproteobacteria_gi_484210315-121892-137573 hallmark;noncaudo 25;11;3;11 Viruses;ssDNA viruses;unknown;Inoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas campestris pv. musacearum NCPPB 4379 prophage linear Cluster_153 Gammaproteobacteria_gi_484210951-121748-137383 hallmark;noncaudo 25;10;3;12 Viruses;ssDNA viruses;unknown;Inoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas campestris pv. musacearum NCPPB 4380 prophage linear Cluster_153 Gammaproteobacteria_gi_484212922-123788-133278 hallmark;noncaudo 12;5;1;6 Viruses;ssDNA viruses;unknown;Inoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas campestris pv. musacearum NCPPB 4394 prophage linear Cluster_322 Gammaproteobacteria_gi_484213551 hallmark 14;7;;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas vasicola pv. vasculorum NCPPB 1326 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_484216116-105899-115851 hallmark;refseq 13;10;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas vasicola pv. vasculorum NCPPB 206 prophage linear Cluster_0 Gammaproteobacteria_gi_484216135-320523-330087 hallmark;noncaudo 16;8;;8 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas vasicola pv. vasculorum NCPPB 206 prophage linear Cluster_153 Gammaproteobacteria_gi_484216160 hallmark;refseq 22;16;;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas vasicola pv. vasculorum NCPPB 206 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_484221647 noncaudo 12;3;1;8 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis YN2551 extrachromosomal linear Cluster_51 Gammaproteobacteria_gi_484221655 refseq 13;8;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis YN2551 extrachromosomal linear Cluster_27 Gammaproteobacteria_gi_484227940 hallmark;refseq 35;31;1;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas agarici NCPPB 2289 extrachromosomal linear Cluster_137 Gammaproteobacteria_gi_484228155 hallmark;refseq 91;39;13;39 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas agarici NCPPB 2289 extrachromosomal linear Cluster_54 Gammaproteobacteria_gi_484230766 refseq 11;8;;3 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas axonopodis pv. manihotis str. AFNC1360 extrachromosomal linear Cluster_43 Gammaproteobacteria_gi_484231890-533788-628137 hallmark;refseq 65;24;17;24 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Wohlfahrtiimonas Wohlfahrtiimonas chitiniclastica DSM 18708 prophage linear Cluster_0 Gammaproteobacteria_gi_484232090-11680-18797 noncaudo 13;8;;5 Viruses;ssDNA viruses;unknown;Inoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas axonopodis pv. manihotis str. CIO1 prophage linear Cluster_43 Gammaproteobacteria_gi_484233311 refseq 10;7;;3 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas axonopodis pv. manihotis str. IBSBF 1182 extrachromosomal linear Cluster_43 Gammaproteobacteria_gi_484233324 refseq 13;9;;4 Viruses;ssDNA viruses;unknown;Inoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas axonopodis pv. manihotis str. IBSBF 1182 extrachromosomal linear Cluster_43 Gammaproteobacteria_gi_484233787 refseq 23;16;;7 Viruses;ssDNA viruses;unknown;Inoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas axonopodis pv. manihotis str. IBSBF 1411 extrachromosomal linear Cluster_43 Gammaproteobacteria_gi_484234142 refseq 21;15;;6 Viruses;ssDNA viruses;unknown;Inoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas axonopodis pv. manihotis str. IBSBF 1994 extrachromosomal linear Cluster_43 Gammaproteobacteria_gi_484234359 hallmark;refseq 68;21;16;31 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Oceanospirillales;Hahellaceae;Hahella Hahella ganghwensis DSM 17046 extrachromosomal linear Cluster_168 Gammaproteobacteria_gi_484234849 refseq 9;7;;2 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas axonopodis pv. manihotis str. IBSBF 2345 extrachromosomal linear Cluster_43 Gammaproteobacteria_gi_484235044 refseq 9;7;;2 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas axonopodis pv. manihotis str. IBSBF 2346 extrachromosomal linear Cluster_43 Gammaproteobacteria_gi_484235291 hallmark;refseq 25;10;3;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas axonopodis pv. manihotis str. IBSBF 2538 extrachromosomal linear Cluster_184 Gammaproteobacteria_gi_484235315 hallmark 17;6;;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Alteromonadales;Alteromonadaceae;Microbulbifer Microbulbifer variabilis ATCC 700307 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_484235442 hallmark 32;7;2;23 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas axonopodis pv. manihotis str. IBSBF 2538 extrachromosomal linear Cluster_390 Gammaproteobacteria_gi_484235848 refseq 11;8;;3 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas axonopodis pv. manihotis str. IBSBF 2538 extrachromosomal linear Cluster_43 Gammaproteobacteria_gi_484236201 hallmark;refseq 27;12;3;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas axonopodis pv. manihotis str. IBSBF 2539 extrachromosomal linear Cluster_184 Gammaproteobacteria_gi_484236233 refseq 11;8;;3 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas axonopodis pv. manihotis str. IBSBF 2539 extrachromosomal linear Cluster_43 Gammaproteobacteria_gi_484236376 hallmark 38;8;2;28 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas axonopodis pv. manihotis str. IBSBF 2539 extrachromosomal linear Cluster_390 Gammaproteobacteria_gi_484236603 refseq 9;7;;2 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas axonopodis pv. manihotis str. IBSBF 2665 extrachromosomal linear Cluster_43 Gammaproteobacteria_gi_484237025-66-12781 refseq 23;16;;7 Viruses;ssDNA viruses;unknown;Inoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas axonopodis pv. manihotis str. IBSBF 2666 prophage linear Cluster_43 Gammaproteobacteria_gi_484237295 refseq 10;6;;4 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas axonopodis pv. manihotis str. IBSBF 2667 extrachromosomal linear Cluster_43 Gammaproteobacteria_gi_484237461 refseq 5;4;;1 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas axonopodis pv. manihotis str. IBSBF 2670 extrachromosomal linear Cluster_43 Gammaproteobacteria_gi_484237469-5094-14398 refseq 17;12;;5 Viruses;ssDNA viruses;unknown;Inoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas axonopodis pv. manihotis str. IBSBF 2670 prophage linear Cluster_43 Gammaproteobacteria_gi_484237693-0-6199 refseq 11;8;;3 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas axonopodis pv. manihotis str. IBSBF 2672 prophage linear Cluster_43 Gammaproteobacteria_gi_484237847-80-6965 refseq 12;8;;4 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas axonopodis pv. manihotis str. IBSBF 2673 prophage linear Cluster_43 Gammaproteobacteria_gi_484238102 refseq 10;7;1;2 Viruses;ssDNA viruses;unknown;Inoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas axonopodis pv. manihotis str. IBSBF 278 extrachromosomal linear Cluster_43 Gammaproteobacteria_gi_484238114 hallmark;refseq 38;18;2;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas axonopodis pv. manihotis str. IBSBF 278 extrachromosomal linear Cluster_184 Gammaproteobacteria_gi_484238593 hallmark 21;6;1;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas axonopodis pv. manihotis str. IBSBF 280 extrachromosomal linear Cluster_390 Gammaproteobacteria_gi_484238671 hallmark;refseq 11;6;;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas axonopodis pv. manihotis str. IBSBF 280 extrachromosomal linear Cluster_184 Gammaproteobacteria_gi_484238875 refseq 9;7;;2 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas axonopodis pv. manihotis str. IBSBF 280 extrachromosomal linear Cluster_43 Gammaproteobacteria_gi_484239119-4520-14952 refseq 18;12;;6 Viruses;ssDNA viruses;unknown;Inoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas axonopodis pv. manihotis str. IBSBF 2816 prophage linear Cluster_43 Gammaproteobacteria_gi_484239153 refseq 12;8;1;3 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas axonopodis pv. manihotis str. IBSBF 2818 extrachromosomal linear Cluster_43 Gammaproteobacteria_gi_484239415-4420-14852 refseq 18;12;;6 Viruses;ssDNA viruses;unknown;Inoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas axonopodis pv. manihotis str. IBSBF 2819 prophage linear Cluster_43 Gammaproteobacteria_gi_484239930 noncaudo 5;3;;2 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas axonopodis pv. manihotis str. IBSBF 2819 extrachromosomal linear Cluster_43 Gammaproteobacteria_gi_484240186-4517-17904 refseq 24;16;;8 Viruses;ssDNA viruses;unknown;Inoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas axonopodis pv. manihotis str. IBSBF 2820 prophage linear Cluster_43 Gammaproteobacteria_gi_484240332-58-6583 refseq 12;8;;4 Viruses;ssDNA viruses;unknown;Inoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas axonopodis pv. manihotis str. IBSBF 2821 prophage linear Cluster_43 Gammaproteobacteria_gi_484240365 noncaudo 7;4;;3 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas axonopodis pv. manihotis str. IBSBF 2821 extrachromosomal linear Cluster_43 Gammaproteobacteria_gi_484240863 noncaudo 7;3;;4 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas axonopodis pv. manihotis str. IBSBF 285 extrachromosomal linear Cluster_43 Gammaproteobacteria_gi_484240938 hallmark;refseq 46;27;4;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas axonopodis pv. manihotis str. IBSBF 285 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_484245404 refseq 11;8;;3 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas axonopodis pv. manihotis str. ORST17 extrachromosomal linear Cluster_43 Gammaproteobacteria_gi_484247344 refseq 11;8;;3 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas axonopodis pv. manihotis str. ORST X27 extrachromosomal linear Cluster_43 Gammaproteobacteria_gi_484247659 hallmark 32;7;2;23 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas axonopodis pv. manihotis str. ThaiXam extrachromosomal linear Cluster_390 Gammaproteobacteria_gi_484247867 hallmark;refseq 21;11;2;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas axonopodis pv. manihotis str. ThaiXam extrachromosomal linear Cluster_184 Gammaproteobacteria_gi_484248358 hallmark;refseq 38;25;3;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas axonopodis pv. manihotis str. UA226 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_484248765 refseq 11;8;;3 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas axonopodis pv. manihotis str. UA303 extrachromosomal linear Cluster_43 Gammaproteobacteria_gi_484249003 refseq 11;8;;3 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas axonopodis pv. manihotis str. UA306 extrachromosomal linear Cluster_43 Gammaproteobacteria_gi_484249836-6960-13225 refseq 11;8;;3 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas axonopodis pv. manihotis str. UA324 prophage linear Cluster_43 Gammaproteobacteria_gi_484250130 refseq 12;8;1;3 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas axonopodis pv. manihotis str. UA536 extrachromosomal linear Cluster_43 Gammaproteobacteria_gi_484250532 refseq 12;8;1;3 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas axonopodis pv. manihotis str. UA556 extrachromosomal linear Cluster_43 Gammaproteobacteria_gi_484250687 refseq 11;8;;3 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas axonopodis pv. manihotis str. UA560 extrachromosomal linear Cluster_43 Gammaproteobacteria_gi_484251017 refseq 11;8;;3 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas axonopodis pv. manihotis str. UA686 extrachromosomal linear Cluster_43 Gammaproteobacteria_gi_484251403 refseq 11;8;;3 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas axonopodis pv. manihotis str. UG21 extrachromosomal linear Cluster_43 Gammaproteobacteria_gi_484253064 refseq 6;4;;2 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas axonopodis pv. manihotis str. UG28 extrachromosomal linear Cluster_43 Gammaproteobacteria_gi_484255311 refseq 10;7;;3 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas axonopodis pv. manihotis str. UG45 extrachromosomal circular Cluster_43 Gammaproteobacteria_gi_484256122 refseq 11;8;;3 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas axonopodis pv. manihotis str. UG51 extrachromosomal linear Cluster_43 Gammaproteobacteria_gi_484256503 refseq 11;8;;3 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas axonopodis pv. manihotis str. Xam1134 extrachromosomal linear Cluster_43 Gammaproteobacteria_gi_484256810 refseq 13;8;;5 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas axonopodis pv. manihotis str. Xam668 extrachromosomal linear Cluster_43 Gammaproteobacteria_gi_484256996 refseq 10;7;;3 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas axonopodis pv. manihotis str. Xam668 extrachromosomal linear Cluster_43 Gammaproteobacteria_gi_484257550 refseq 9;7;;2 Viruses;ssDNA viruses;unknown;Inoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas axonopodis pv. manihotis str. Xam672 extrachromosomal linear Cluster_43 Gammaproteobacteria_gi_484257565 hallmark;refseq 39;18;2;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas axonopodis pv. manihotis str. Xam672 extrachromosomal linear Cluster_184 Gammaproteobacteria_gi_484258229 refseq 11;8;;3 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas axonopodis pv. manihotis str. Xam678 extrachromosomal linear Cluster_43 Gammaproteobacteria_gi_484286569-99263-109418 noncaudo 14;8;2;4 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio harveyi ZJ0603 prophage linear Cluster_14 Gammaproteobacteria_gi_484317654 hallmark 101;23;13;65 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter venetianus RAG-1 = CIP 110063 extrachromosomal linear Cluster_66 Gammaproteobacteria_gi_484331101 hallmark;refseq 38;37;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis 2501 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_484331467 hallmark;refseq 29;22;3;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis 2501 extrachromosomal linear Cluster_18 Gammaproteobacteria_gi_484331677 refseq 18;12;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis 2501 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_484331888 refseq 18;16;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis 2501 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_484337382-174718-185041 hallmark;noncaudo 18;11;;7 Viruses;dsDNA viruses no RNA stage;unknown;Corticoviridae;Corticovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Alteromonadales;Pseudoalteromonadaceae;Pseudoalteromonas Pseudoalteromonas sp. NJ631 prophage linear Cluster_453 Gammaproteobacteria_gi_484337393-380-56326 hallmark;refseq;vdb 64;30;15;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Alteromonadales;Pseudoalteromonadaceae;Pseudoalteromonas Pseudoalteromonas sp. NJ631 prophage linear Cluster_0 Gammaproteobacteria_gi_484343531-2204-10731 noncaudo 15;4;2;9 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas stutzeri XLDN-R prophage linear Cluster_414 Gammaproteobacteria_gi_484344433 hallmark;refseq 14;8;1;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas tolaasii 6264 extrachromosomal linear Cluster_148 Gammaproteobacteria_gi_484344445 hallmark;refseq 19;11;4;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas tolaasii 6264 extrachromosomal linear Cluster_18 Gammaproteobacteria_gi_484932882 hallmark;refseq 45;19;10;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. actinidiae CFBP 7286 extrachromosomal linear Cluster_71 Gammaproteobacteria_gi_484933207 hallmark;refseq 40;19;10;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. actinidiae KW41 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_484958176 hallmark;refseq 35;19;9;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. actinidiae PA459 extrachromosomal linear Cluster_71 Gammaproteobacteria_gi_484969890 refseq 15;8;;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. actinidiae PA459 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_485033144 hallmark;refseq 45;19;9;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. actinidiae CH2010-6 extrachromosomal linear Cluster_71 Gammaproteobacteria_gi_485034712 refseq 13;8;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis CMCC96001 extrachromosomal linear Cluster_27 Gammaproteobacteria_gi_485044143 noncaudo 11;3;2;6 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio coralliilyticus P1 extrachromosomal linear Cluster_265 Gammaproteobacteria_gi_485045818-137-41875 hallmark;refseq 76;29;10;37 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas luteola XLDN4-9 prophage linear Cluster_120 Gammaproteobacteria_gi_485046729-53938-58407 noncaudo 5;5;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa MRW44.1 prophage linear Cluster_13 Gammaproteobacteria_gi_485046749-20923-27654 refseq 11;8;2;1 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa MRW44.1 prophage linear Cluster_13 Gammaproteobacteria_gi_485049308 hallmark;refseq 48;48;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa DQ8 extrachromosomal linear Cluster_59 Gammaproteobacteria_gi_485049921-37254-67370 hallmark;refseq 49;34;3;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa DQ8 prophage linear Cluster_120 Gammaproteobacteria_gi_485051096 hallmark;refseq 32;24;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae ST258-490 extrachromosomal linear Cluster_25 Gammaproteobacteria_gi_485051143 hallmark;refseq 26;17;2;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae ST258-490 extrachromosomal linear Cluster_148 Gammaproteobacteria_gi_485052431-52487-85953 hallmark;refseq 46;26;11;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas psychrophila HA-4 prophage linear Cluster_72 Gammaproteobacteria_gi_485052431-8020-32680 hallmark;refseq 33;19;8;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas psychrophila HA-4 prophage linear Cluster_71 Gammaproteobacteria_gi_485052640 hallmark;refseq 16;11;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas psychrophila HA-4 extrachromosomal circular Cluster_0 Gammaproteobacteria_gi_485053466-351-39692 hallmark;refseq 50;34;4;12 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa AH16 prophage linear Cluster_0 Gammaproteobacteria_gi_485053607-0-6682 noncaudo 11;7;1;3 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa AH16 prophage linear Cluster_13 Gammaproteobacteria_gi_485053646 noncaudo 13;2;1;10 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa AH16 extrachromosomal linear Cluster_163 Gammaproteobacteria_gi_485053656 noncaudo 11;2;2;7 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa AH16 extrachromosomal linear Cluster_14 Gammaproteobacteria_gi_485053681 noncaudo 4;3;;1 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa AH16 extrachromosomal linear Cluster_13 Gammaproteobacteria_gi_485055641-9395-48050 hallmark;refseq 59;38;3;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas putida S12 prophage linear Cluster_64 Gammaproteobacteria_gi_485059695 refseq 9;5;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio anguillarum 96F extrachromosomal linear Cluster_303 Gammaproteobacteria_gi_485059728 noncaudo 10;2;1;7 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio anguillarum 96F extrachromosomal linear Cluster_228 Gammaproteobacteria_gi_485060094 hallmark;refseq 7;5;1;1 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio anguillarum RV22 extrachromosomal linear Cluster_242 Gammaproteobacteria_gi_485060171-47262-57037 noncaudo 14;4;1;9 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Aeromonadales;Aeromonadaceae;Aeromonas Aeromonas sp. 159 prophage linear Cluster_266 Gammaproteobacteria_gi_485060621 hallmark;refseq 34;22;2;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Serratia Serratia marcescens W2.3 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_485060623-116221-134226 hallmark;refseq 23;19;1;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Serratia Serratia marcescens W2.3 prophage linear Cluster_47 Gammaproteobacteria_gi_485060663 hallmark;refseq 20;13;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Serratia Serratia marcescens W2.3 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_485061874-18529-54550 hallmark;refseq 49;27;10;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas sp. S13.1.2 prophage linear Cluster_72 Gammaproteobacteria_gi_485061947-17879-69738 hallmark;vdb 68;28;8;32 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas sp. S13.1.2 prophage linear Cluster_83 Gammaproteobacteria_gi_485061967 hallmark;refseq 100;38;22;40 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas sp. S13.1.2 extrachromosomal linear Cluster_148 Gammaproteobacteria_gi_485066476 hallmark 18;8;4;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas oryzae X11-5A extrachromosomal linear Cluster_498 Gammaproteobacteria_gi_485067076 hallmark;refseq 59;35;7;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa PABL056 extrachromosomal linear Cluster_233 Gammaproteobacteria_gi_485067122-27698-37091 refseq 15;8;1;6 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa PABL056 prophage linear Cluster_13 Gammaproteobacteria_gi_485067185 hallmark;refseq 66;46;;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa PABL056 extrachromosomal circular Cluster_164 Gammaproteobacteria_gi_485067225 hallmark;refseq 44;29;2;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa PABL056 extrachromosomal linear Cluster_120 Gammaproteobacteria_gi_485067267 refseq 11;6;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa PABL056 extrachromosomal linear Cluster_19 Gammaproteobacteria_gi_485067335 hallmark;refseq 35;16;5;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas oryzae X8-1A extrachromosomal linear Cluster_498 Gammaproteobacteria_gi_485067653 hallmark 23;9;4;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter johnsonii TG19605 extrachromosomal linear Cluster_496 Gammaproteobacteria_gi_485067757 hallmark;refseq 56;26;8;22 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter johnsonii TG19605 extrachromosomal linear Cluster_24 Gammaproteobacteria_gi_485068581 hallmark;refseq 34;17;2;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Moraxella Moraxella boevrei DSM 14165 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_485068593 hallmark;refseq 21;13;2;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Moraxella Moraxella boevrei DSM 14165 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_485091576-83543-92247 noncaudo 12;5;;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Alteromonadales;Pseudoalteromonadaceae;Pseudoalteromonas Pseudoalteromonas piscicida ATCC 15057 prophage linear Cluster_19 Gammaproteobacteria_gi_485099379-23168-31470 noncaudo 11;4;1;6 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Oceanospirillales;Halomonadaceae;Kushneria Kushneria aurantia DSM 21353 prophage linear Cluster_527 Gammaproteobacteria_gi_485452921-5-29473 hallmark;refseq 47;34;4;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae JH1 prophage linear Cluster_247 Gammaproteobacteria_gi_485452925-0-19495 hallmark;refseq 30;26;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae JH1 prophage linear Cluster_0 Gammaproteobacteria_gi_485452988 hallmark;refseq 55;31;5;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae JH1 extrachromosomal linear Cluster_26 Gammaproteobacteria_gi_485452996 hallmark;refseq 117;97;7;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae JH1 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_485453054-0-25173 hallmark;refseq 43;30;4;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae 1162281 prophage linear Cluster_37 Gammaproteobacteria_gi_485456525 hallmark;refseq 48;22;12;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. actinidiae str. NCPPB 3871 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_485456909 refseq 30;11;9;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. actinidiae str. CRAFRU8.43 extrachromosomal linear Cluster_71 Gammaproteobacteria_gi_485457008 hallmark;refseq 15;8;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. actinidiae str. CRAFRU8.43 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_485457656 hallmark;refseq 48;22;12;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. actinidiae str. NCPPB 3739 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_485459497-10836-22384 hallmark;refseq 10;8;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae 1191100241 prophage linear Cluster_0 Gammaproteobacteria_gi_485459503 hallmark;refseq 25;24;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae 1191100241 extrachromosomal linear Cluster_54 Gammaproteobacteria_gi_485459504 hallmark;refseq 25;19;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae 1191100241 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_485459567 refseq 16;11;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae 1191100241 extrachromosomal linear Cluster_54 Gammaproteobacteria_gi_485459610-176-4874 refseq;vdb 8;7;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae 1191100241 prophage linear Cluster_25 Gammaproteobacteria_gi_485459631-0-36978 hallmark;refseq 61;32;11;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae 1191100241 prophage linear Cluster_37 Gammaproteobacteria_gi_485459908-152-16200 hallmark;refseq 25;21;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae 1191100241 prophage linear Cluster_0 Gammaproteobacteria_gi_485462086-2551218-2559901 noncaudo 12;4;2;6 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa 9BR prophage linear Cluster_175 Gammaproteobacteria_gi_485462086-4851972-4887947 hallmark;refseq 52;39;3;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa 9BR prophage linear Cluster_21 Gammaproteobacteria_gi_485462086-820367-832907 noncaudo 17;8;;9 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa 9BR prophage linear Cluster_13 Gammaproteobacteria_gi_485462089-2484978-2495623 noncaudo 17;4;2;11 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa 19BR prophage linear Cluster_175 Gammaproteobacteria_gi_485462089-4793324-4829299 hallmark;refseq 52;39;3;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa 19BR prophage linear Cluster_21 Gammaproteobacteria_gi_485462089-789584-802124 noncaudo 17;8;;9 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa 19BR prophage linear Cluster_13 Gammaproteobacteria_gi_485462091-2519608-2538208 noncaudo 28;6;3;19 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa 213BR prophage linear Cluster_175 Gammaproteobacteria_gi_485462091-3053160-3089135 hallmark;refseq 52;39;3;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa 213BR prophage linear Cluster_21 Gammaproteobacteria_gi_485462091-789763-802303 noncaudo 17;8;;9 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa 213BR prophage linear Cluster_13 Gammaproteobacteria_gi_485473597-108249-146077 hallmark;refseq;vdb 53;34;5;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas putida B6-2 prophage linear Cluster_64 Gammaproteobacteria_gi_485670788-0-9473 hallmark;noncaudo;vdb 15;3;2;10 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter pittii D499 prophage linear Cluster_416 Gammaproteobacteria_gi_485683816-39-9649 hallmark;noncaudo 13;6;;7 Viruses;ssDNA viruses;unknown;Inoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas campestris pv. musacearum 'Kenyan' prophage linear Cluster_322 Gammaproteobacteria_gi_485821029 hallmark;refseq 44;42;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 178850 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_485821170 hallmark;refseq 30;24;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 178850 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_485821841 refseq 11;10;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Punalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 178850 extrachromosomal linear Cluster_19 Gammaproteobacteria_gi_485825320 refseq 18;18;; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 178850 extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_485826247 refseq 31;26;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 178850 extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_485826986-0-68498 hallmark;refseq 65;46;11;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 178900 prophage linear Cluster_21 Gammaproteobacteria_gi_485828640 noncaudo 10;4;1;5 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 179550 extrachromosomal linear Cluster_231 Gammaproteobacteria_gi_485828672 hallmark;refseq 15;10;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 179550 extrachromosomal linear Cluster_11 Gammaproteobacteria_gi_485828702 hallmark;refseq 32;17;9;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 179550 extrachromosomal linear Cluster_28 Gammaproteobacteria_gi_485829024 hallmark;refseq 28;21;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 179550 extrachromosomal linear Cluster_261 Gammaproteobacteria_gi_485829373-483-33837 hallmark;refseq 48;23;9;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 179550 prophage linear Cluster_0 Gammaproteobacteria_gi_485830568 refseq 22;12;3;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 180200 extrachromosomal circular Cluster_17 Gammaproteobacteria_gi_485830744 hallmark;refseq 37;24;3;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 180200 extrachromosomal linear Cluster_11 Gammaproteobacteria_gi_485830786 hallmark;refseq 15;13;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 180200 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_485831174 hallmark;refseq 22;17;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 180200 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_485831310-0-7731 noncaudo 14;4;1;9 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 180200 prophage linear Cluster_231 Gammaproteobacteria_gi_485834121 hallmark;refseq 11;10;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2730450 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_485834217 refseq 30;15;10;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2730450 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_485834478 hallmark;refseq 39;30;7;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2730450 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_485834817 refseq 28;13;5;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2730450 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_485835422 hallmark;refseq 19;13;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2741950 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_485835500 hallmark;refseq 35;16;5;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2741950 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_485835596 hallmark;refseq 41;31;6;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2741950 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_485836321 hallmark;refseq 27;20;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2860650 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_485836355 refseq 17;14;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2860650 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_485836625 refseq 24;14;2;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2862600 extrachromosomal linear Cluster_504 Gammaproteobacteria_gi_485836883 hallmark;refseq 22;18;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2862600 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_485837163 hallmark;refseq 33;26;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2862600 extrachromosomal linear Cluster_21 Gammaproteobacteria_gi_485837199 hallmark;refseq 37;29;7;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2862600 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_485837620 hallmark;refseq 14;11;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2864350 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_485838051-131956-166422 hallmark;refseq;vdb 52;25;9;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2864350 prophage linear Cluster_72 Gammaproteobacteria_gi_485838070-27368-40936 hallmark;refseq 16;13;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2864350 prophage linear Cluster_22 Gammaproteobacteria_gi_485838403 hallmark;refseq 30;20;9;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2866350 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_485838821 hallmark;refseq 30;24;6; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2875150 extrachromosomal linear Cluster_21 Gammaproteobacteria_gi_485838828 refseq;vdb 13;7;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2875150 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_485838863 refseq 16;11;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2875150 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_485838892 refseq 54;46;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2875150 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_485838995 hallmark;refseq 14;10;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2875150 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_485839132 hallmark;refseq 54;43;6;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2875150 extrachromosomal linear Cluster_11 Gammaproteobacteria_gi_485839184 hallmark;refseq 29;23;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2875150 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_485839192 hallmark;refseq 45;33;3;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2875150 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_485839215-822-24020 hallmark;refseq 28;21;3;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2875150 prophage linear Cluster_26 Gammaproteobacteria_gi_485839263 hallmark;refseq 21;15;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2875150 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_485839612 refseq 24;15;5;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2875150 extrachromosomal linear Cluster_19 Gammaproteobacteria_gi_485839735 hallmark;refseq 48;23;11;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli BCE008_MS-01 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_485840040 hallmark;refseq 31;27;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli BCE008_MS-01 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_485840046 hallmark;refseq 28;14;8;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli BCE008_MS-01 extrachromosomal linear Cluster_28 Gammaproteobacteria_gi_485843121 hallmark;refseq 24;23;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli BCE011_MS-01 extrachromosomal circular Cluster_0 Gammaproteobacteria_gi_485843574 hallmark;refseq 14;10;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli BCE030_MS-09 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_485843913 hallmark;refseq 39;30;7;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli BCE030_MS-09 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_485844535 refseq 20;7;4;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli BCE030_MS-09 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_485844940 hallmark;refseq 12;11;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli BCE032_MS-12 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_485845783 hallmark;refseq 27;22;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MP021561.3 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_485846141-157-11383 hallmark;refseq 10;8;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MP021561.3 prophage linear Cluster_0 Gammaproteobacteria_gi_485846198 hallmark 32;8;7;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MP021561.3 extrachromosomal linear Cluster_481 Gammaproteobacteria_gi_485846205 hallmark;refseq 17;12;5; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MP021561.3 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_485846414-0-34075 hallmark;refseq;vdb 52;25;9;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MP021561.3 prophage linear Cluster_72 Gammaproteobacteria_gi_485846684 refseq 28;18;6;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MP021561.3 extrachromosomal linear Cluster_37 Gammaproteobacteria_gi_485846872 hallmark;refseq 33;27;6; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0298942.10 extrachromosomal linear Cluster_21 Gammaproteobacteria_gi_485846875 refseq 11;9;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0298942.10 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_485846881 refseq 24;14;2;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0298942.10 extrachromosomal linear Cluster_504 Gammaproteobacteria_gi_485847037 hallmark;refseq 21;18;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0298942.10 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_485847306 hallmark;refseq 36;29;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0298942.10 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_485847913 hallmark;refseq 36;29;7; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0298942.11 extrachromosomal linear Cluster_21 Gammaproteobacteria_gi_485847943 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0298942.11 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_485847969 hallmark;refseq 33;26;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0298942.11 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_485848481 hallmark;refseq 18;16;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0298942.12 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_485848517 hallmark;refseq 33;26;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0298942.12 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_485848817 hallmark;refseq 32;26;6; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0298942.12 extrachromosomal linear Cluster_21 Gammaproteobacteria_gi_485848888 refseq 21;10;3;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0298942.12 extrachromosomal linear Cluster_21 Gammaproteobacteria_gi_485849212 refseq 22;10;2;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0298942.14 extrachromosomal linear Cluster_21 Gammaproteobacteria_gi_485849420 hallmark;refseq 34;27;7; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0298942.14 extrachromosomal linear Cluster_21 Gammaproteobacteria_gi_485849439 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0298942.14 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_485849526 hallmark;refseq 33;26;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0298942.14 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_485850267 hallmark;refseq 21;18;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0298942.15 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_485850288 hallmark;refseq 33;26;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0298942.15 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_485850292 refseq 8;5;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0298942.15 extrachromosomal linear Cluster_47 Gammaproteobacteria_gi_485850905 refseq 24;13;2;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0298942.2 extrachromosomal linear Cluster_21 Gammaproteobacteria_gi_485851355 refseq 17;10;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0298942.2 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_485851364 hallmark;refseq 20;17;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0298942.2 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_485851501 refseq 15;13;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0298942.2 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_485851732 hallmark;refseq 34;28;6; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0298942.2 extrachromosomal linear Cluster_21 Gammaproteobacteria_gi_485851735 hallmark;refseq 19;15;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0298942.2 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_485852226 refseq 22;10;2;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0298942.6 extrachromosomal linear Cluster_21 Gammaproteobacteria_gi_485852473 hallmark;refseq 35;28;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0298942.6 extrachromosomal linear Cluster_21 Gammaproteobacteria_gi_485852519 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0298942.6 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_485852581 hallmark;refseq 33;26;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0298942.6 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_485854135 hallmark;refseq 34;27;7; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0298942.7 extrachromosomal linear Cluster_21 Gammaproteobacteria_gi_485854200 hallmark;refseq 20;17;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0298942.7 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_485854289 hallmark;refseq 33;26;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0298942.7 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_485854294 refseq 8;5;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0298942.7 extrachromosomal linear Cluster_47 Gammaproteobacteria_gi_485856540 refseq 20;10;2;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0298942.8 extrachromosomal linear Cluster_21 Gammaproteobacteria_gi_485856862 hallmark;refseq 34;28;6; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0298942.8 extrachromosomal linear Cluster_21 Gammaproteobacteria_gi_485856972 hallmark;refseq 22;19;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0298942.8 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_485857067 hallmark;refseq 34;27;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0298942.8 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_485857124 refseq 21;10;5;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0298942.8 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_485858305 refseq 20;9;2;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0298942.9 extrachromosomal linear Cluster_21 Gammaproteobacteria_gi_485858670 hallmark;refseq 21;17;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0298942.9 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_485859274 hallmark;refseq 20;16;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0298942.9 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_485859371 hallmark;refseq 33;26;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0298942.9 extrachromosomal linear Cluster_21 Gammaproteobacteria_gi_485859852-23081-58046 hallmark;refseq 52;42;5;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299438.10 prophage linear Cluster_3 Gammaproteobacteria_gi_485859993 hallmark;refseq 24;20;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299438.10 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_485860027-0-11180 hallmark;refseq 10;8;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299438.10 prophage linear Cluster_0 Gammaproteobacteria_gi_485860108 hallmark;refseq 24;19;5; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299438.10 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_485860214 hallmark;refseq 20;16;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299438.10 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_485860977 hallmark;refseq 33;30;;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299438.10 extrachromosomal linear Cluster_7 Gammaproteobacteria_gi_485861399 hallmark;refseq 45;31;10;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299438.11 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_485862786-26374-56968 hallmark;refseq 39;34;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299438.11 prophage linear Cluster_0 Gammaproteobacteria_gi_485863404 hallmark;refseq 48;33;10;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299438.3 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_485864157-26443-57037 hallmark;refseq 39;34;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299438.3 prophage linear Cluster_0 Gammaproteobacteria_gi_485864538-18891-49161 hallmark;refseq 46;38;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299438.4 prophage linear Cluster_3 Gammaproteobacteria_gi_485864642 hallmark;refseq 28;25;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299438.4 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_485864748 hallmark;refseq 26;19;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299438.4 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_485864853 hallmark;refseq 21;17;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299438.4 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_485865078-64884-101524 hallmark;refseq 49;45;1;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299438.4 prophage linear Cluster_7 Gammaproteobacteria_gi_485866036 hallmark;refseq 45;31;10;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299438.5 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_485866756-26417-57011 hallmark;refseq 40;35;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299438.5 prophage linear Cluster_0 Gammaproteobacteria_gi_485867316 hallmark;refseq 46;32;10;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299438.6 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_485867975-26507-57101 hallmark;refseq 39;34;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299438.6 prophage linear Cluster_0 Gammaproteobacteria_gi_485868544 hallmark;refseq 46;32;10;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299438.7 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_485869188-26453-57047 hallmark;refseq 39;34;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299438.7 prophage linear Cluster_0 Gammaproteobacteria_gi_485869797 hallmark;refseq 40;27;9;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299438.8 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_485870727-26469-57063 hallmark;refseq 39;34;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299438.8 prophage linear Cluster_0 Gammaproteobacteria_gi_485871447-58922-104356 hallmark;refseq 59;45;11;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299438.9 prophage linear Cluster_1 Gammaproteobacteria_gi_485871848 refseq 23;18;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Punalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299438.9 extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_485872330 hallmark;refseq 15;12;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299438.9 extrachromosomal linear Cluster_142 Gammaproteobacteria_gi_485873494 refseq 14;12;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Punalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299438.9 extrachromosomal linear Cluster_19 Gammaproteobacteria_gi_485875016 refseq 18;10;5;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P02997067.6 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_485875039 hallmark;refseq 28;22;6; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P02997067.6 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_485875121-283248-318163 hallmark;refseq 48;45;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P02997067.6 prophage linear Cluster_3 Gammaproteobacteria_gi_485875204 hallmark;refseq 98;87;2;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P02997067.6 extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_485875580-60166-93810 hallmark;refseq 41;34;3;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P02997067.6 prophage linear Cluster_0 Gammaproteobacteria_gi_485877189 hallmark;refseq 52;29;18;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299917.10 extrachromosomal linear Cluster_28 Gammaproteobacteria_gi_485877391 hallmark;refseq 37;35;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299917.10 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_485877668 hallmark;refseq 37;35;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299917.10 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_485877871-0-36637 hallmark;refseq;vdb 53;26;9;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299917.10 prophage linear Cluster_72 Gammaproteobacteria_gi_485877993 hallmark;refseq 44;32;8;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299917.10 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_485878089 hallmark;refseq 27;27;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299917.10 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_485878244 hallmark;refseq 31;25;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299917.10 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_485878370-338-14052 hallmark;refseq 15;13;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299917.10 prophage linear Cluster_2 Gammaproteobacteria_gi_485879297-0-34048 hallmark;refseq;vdb 51;25;9;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299917.2 prophage linear Cluster_72 Gammaproteobacteria_gi_485879421 hallmark;refseq 44;32;8;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299917.2 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_485879479-50682-72763 hallmark;refseq 34;28;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299917.2 prophage linear Cluster_0 Gammaproteobacteria_gi_485879501-99-10657 hallmark;refseq 10;9;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299917.2 prophage linear Cluster_0 Gammaproteobacteria_gi_485879515 hallmark;refseq 31;31;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299917.2 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_485879591-7903-21617 hallmark;refseq 15;13;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299917.2 prophage linear Cluster_2 Gammaproteobacteria_gi_485880965 hallmark;refseq 29;28;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299917.2 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_485881604-0-37087 hallmark;refseq 54;25;12;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299917.3 prophage linear Cluster_72 Gammaproteobacteria_gi_485881735 hallmark;refseq 17;15;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299917.3 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_485881763 hallmark;refseq 23;18;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299917.3 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_485881770 hallmark;refseq 10;8;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299917.3 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_485881798 hallmark;refseq 16;11;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299917.3 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_485883068 hallmark 32;14;13;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299917.3 extrachromosomal linear Cluster_28 Gammaproteobacteria_gi_485883420-0-34773 hallmark;refseq;vdb 52;25;9;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299917.4 prophage linear Cluster_72 Gammaproteobacteria_gi_485883518 hallmark;refseq 47;35;8;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299917.4 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_485883548-50866-72813 hallmark;refseq 32;27;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299917.4 prophage linear Cluster_0 Gammaproteobacteria_gi_485883582 hallmark;refseq 35;33;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299917.4 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_485883664 hallmark;refseq 25;20;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299917.4 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_485883721-576-19849 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299917.4 prophage linear Cluster_2 Gammaproteobacteria_gi_485885098 hallmark;refseq 48;36;8;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299917.5 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_485885139-50740-72875 hallmark;refseq 32;27;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299917.5 prophage linear Cluster_0 Gammaproteobacteria_gi_485885160 hallmark;refseq 37;35;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299917.5 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_485885232 hallmark;refseq 47;32;12;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299917.5 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_485885254 hallmark;refseq;vdb 32;20;11;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299917.5 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_485885753-0-31066 hallmark;refseq 45;42;;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299917.5 prophage linear Cluster_3 Gammaproteobacteria_gi_485886072 hallmark;refseq 53;29;19;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299917.5 extrachromosomal linear Cluster_28 Gammaproteobacteria_gi_485886401 hallmark;refseq 54;26;10;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299917.5 extrachromosomal linear Cluster_72 Gammaproteobacteria_gi_485886622-0-34807 hallmark;refseq;vdb 52;25;9;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299917.6 prophage linear Cluster_72 Gammaproteobacteria_gi_485886721 hallmark;refseq 32;26;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299917.6 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_485886784-50728-80798 hallmark;refseq 42;36;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299917.6 prophage linear Cluster_0 Gammaproteobacteria_gi_485886792 hallmark;refseq 15;15;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299917.6 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_485886878 hallmark;refseq 29;22;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299917.6 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_485886948 hallmark 19;9;9;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299917.6 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_485887933 hallmark;refseq 25;23;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299917.6 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_485888167-142-36988 hallmark;refseq;vdb 53;26;9;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299917.7 prophage linear Cluster_72 Gammaproteobacteria_gi_485888281-25550-62052 hallmark;refseq 51;36;8;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299917.7 prophage linear Cluster_1 Gammaproteobacteria_gi_485888438 hallmark;refseq 28;22;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299917.7 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_485888508-0-16945 hallmark;refseq 20;17;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299917.7 prophage linear Cluster_2 Gammaproteobacteria_gi_485889340 hallmark;refseq 50;27;18;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299917.7 extrachromosomal linear Cluster_28 Gammaproteobacteria_gi_485889998-55521-77473 hallmark;refseq 36;34;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299917.8 prophage linear Cluster_3 Gammaproteobacteria_gi_485890026-0-33857 hallmark;refseq;vdb 52;25;9;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299917.8 prophage linear Cluster_72 Gammaproteobacteria_gi_485890104 hallmark;refseq 45;33;8;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299917.8 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_485890133-50712-80782 hallmark;refseq 42;36;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299917.8 prophage linear Cluster_0 Gammaproteobacteria_gi_485890210 hallmark;refseq 28;22;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299917.8 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_485890247-0-13107 hallmark;refseq 14;12;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299917.8 prophage linear Cluster_2 Gammaproteobacteria_gi_485890534-38904-52864 hallmark;refseq 16;16;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299917.8 prophage linear Cluster_3 Gammaproteobacteria_gi_485891126-0-33918 hallmark;refseq;vdb 52;25;9;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299917.9 prophage linear Cluster_72 Gammaproteobacteria_gi_485891291 hallmark;refseq 28;22;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299917.9 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_485891902-0-21924 hallmark;refseq 34;32;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299917.9 prophage linear Cluster_3 Gammaproteobacteria_gi_485892289 hallmark;refseq 98;50;31;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0301867.11 extrachromosomal linear Cluster_21 Gammaproteobacteria_gi_485892442 hallmark;refseq 24;21;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0301867.11 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_485892558 refseq 28;13;8;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0301867.11 extrachromosomal linear Cluster_258 Gammaproteobacteria_gi_485894064 refseq 19;12;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0301867.3 extrachromosomal linear Cluster_21 Gammaproteobacteria_gi_485894084 refseq 28;13;8;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0301867.3 extrachromosomal linear Cluster_258 Gammaproteobacteria_gi_485894112-350-25037 hallmark;refseq 28;24;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0301867.3 prophage linear Cluster_1 Gammaproteobacteria_gi_485895729 refseq 25;16;6;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0301867.4 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_485895762 hallmark;refseq 27;23;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0301867.4 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_485899143 hallmark;refseq 99;50;31;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0301867.5 extrachromosomal linear Cluster_21 Gammaproteobacteria_gi_485900587 refseq 28;13;8;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0301867.5 extrachromosomal linear Cluster_258 Gammaproteobacteria_gi_485905661-242-37852 hallmark;refseq 57;37;8;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0301867.7 prophage linear Cluster_21 Gammaproteobacteria_gi_485906292 hallmark;refseq 23;21;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0301867.7 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_485907109 refseq 19;12;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0301867.7 extrachromosomal linear Cluster_21 Gammaproteobacteria_gi_485907270 refseq 28;13;8;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0301867.7 extrachromosomal linear Cluster_258 Gammaproteobacteria_gi_485932367-0-37868 hallmark;refseq 60;39;8;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0301867.8 prophage linear Cluster_21 Gammaproteobacteria_gi_485934336 hallmark;refseq 24;20;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0301867.8 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_485934802 hallmark;refseq 28;23;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0301867.8 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_485944718-25695-57751 hallmark;refseq 50;44;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0302308.10 prophage linear Cluster_3 Gammaproteobacteria_gi_485944833 hallmark;refseq 31;25;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0302308.10 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_485944886-0-11035 hallmark;refseq 10;9;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0302308.10 prophage linear Cluster_0 Gammaproteobacteria_gi_485945261-0-14907 hallmark;refseq 17;15;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0302308.10 prophage linear Cluster_0 Gammaproteobacteria_gi_485946065-23494-57244 hallmark;refseq 53;45;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0302308.11 prophage linear Cluster_3 Gammaproteobacteria_gi_485946160 hallmark;refseq 31;25;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0302308.11 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_485946198-130-13098 hallmark;refseq 12;10;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0302308.11 prophage linear Cluster_0 Gammaproteobacteria_gi_485946473-0-10550 hallmark;refseq 11;9;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0302308.11 prophage linear Cluster_0 Gammaproteobacteria_gi_485947169-24960-57360 hallmark;refseq 50;44;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0302308.12 prophage linear Cluster_3 Gammaproteobacteria_gi_485947203-0-23931 hallmark;refseq 36;30;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0302308.12 prophage linear Cluster_0 Gammaproteobacteria_gi_485947254 refseq 23;17;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0302308.12 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_485948229 refseq 22;19;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0302308.12 extrachromosomal linear Cluster_261 Gammaproteobacteria_gi_485948762 hallmark;refseq 23;22;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0302308.13 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_485949076 hallmark;refseq 32;26;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0302308.13 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_485949127 hallmark;refseq 20;15;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0302308.13 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_485949366-0-11035 hallmark;refseq 10;9;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0302308.13 prophage linear Cluster_0 Gammaproteobacteria_gi_485949414 hallmark;refseq 26;21;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0302308.13 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_485952130-24929-57161 hallmark;refseq 50;44;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0302308.14 prophage linear Cluster_3 Gammaproteobacteria_gi_485952240 hallmark;refseq 29;23;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0302308.14 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_485953160-0-32224 hallmark;refseq 51;45;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0302308.2 prophage linear Cluster_3 Gammaproteobacteria_gi_485953384 hallmark;refseq 32;26;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0302308.2 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_485953729-0-12114 hallmark;refseq 11;9;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0302308.2 prophage linear Cluster_0 Gammaproteobacteria_gi_485970391-23858-58961 hallmark;refseq 54;46;4;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0302308.3 prophage linear Cluster_3 Gammaproteobacteria_gi_485971131 hallmark;refseq 30;24;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0302308.3 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_485973082-0-11763 hallmark;refseq 12;10;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0302308.3 prophage linear Cluster_0 Gammaproteobacteria_gi_485979827 hallmark;refseq 33;26;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0302308.4 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_485980354 hallmark;refseq 22;22;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0302308.4 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_485980545 hallmark;refseq 19;13;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0302308.4 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_485984098-241-11454 hallmark;refseq 10;8;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0302308.4 prophage linear Cluster_0 Gammaproteobacteria_gi_485997406-28056-60279 hallmark;refseq 50;44;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0302308.5 prophage linear Cluster_3 Gammaproteobacteria_gi_485997782 hallmark;refseq 30;24;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0302308.5 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_485998265-0-11483 hallmark;refseq 10;9;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0302308.5 prophage linear Cluster_0 Gammaproteobacteria_gi_486006377 hallmark;refseq 26;17;9; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli p0305293.13 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_486020209 refseq 16;15;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli p0305293.13 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_486021330 hallmark;refseq 23;20;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli p0305293.13 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_486028337-40115-78331 hallmark;refseq 55;43;9;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 179100 prophage linear Cluster_11 Gammaproteobacteria_gi_486030589-26379-48085 hallmark;refseq 32;28;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 179100 prophage linear Cluster_0 Gammaproteobacteria_gi_486030649-0-11837 hallmark;refseq 10;8;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 179100 prophage linear Cluster_0 Gammaproteobacteria_gi_486031906 hallmark;refseq 17;14;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 179100 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_486033158 refseq 21;19;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 179100 extrachromosomal linear Cluster_11 Gammaproteobacteria_gi_486033500 hallmark;refseq 28;19;9; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 179100 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_486034117 hallmark;refseq 16;14;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 179100 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_486035004 refseq 22;10;2;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2733950 extrachromosomal linear Cluster_21 Gammaproteobacteria_gi_486039907 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2733950 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_486040196 hallmark;refseq 33;26;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2733950 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_486047196 hallmark;refseq 31;25;6; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2733950 extrachromosomal linear Cluster_21 Gammaproteobacteria_gi_486052008-170446-198940 hallmark;refseq 39;31;4;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2854350 prophage linear Cluster_2 Gammaproteobacteria_gi_486053443 hallmark;refseq 34;28;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2854350 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_486054077 hallmark 23;7;4;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2854350 extrachromosomal linear Cluster_259 Gammaproteobacteria_gi_486062245 hallmark;refseq 14;9;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli BCE006_MS-23 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_486063155 hallmark;refseq 16;13;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli BCE006_MS-23 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_486067507 hallmark;refseq 40;30;7;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli BCE006_MS-23 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_486086673 hallmark;refseq 35;28;7; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0298942.3 extrachromosomal linear Cluster_21 Gammaproteobacteria_gi_486088187 hallmark;refseq 21;19;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0298942.3 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_486089824 hallmark;refseq 34;27;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0298942.3 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_486095161 refseq 21;10;2;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0298942.3 extrachromosomal linear Cluster_21 Gammaproteobacteria_gi_486108213 refseq 22;10;3;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0298942.4 extrachromosomal linear Cluster_21 Gammaproteobacteria_gi_486113537 hallmark;refseq 34;27;7; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0298942.4 extrachromosomal linear Cluster_21 Gammaproteobacteria_gi_486114202 hallmark;refseq 18;16;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0298942.4 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_486114620 hallmark;refseq 33;26;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0298942.4 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_486126274 refseq 17;13;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Punalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299483.1 extrachromosomal linear Cluster_19 Gammaproteobacteria_gi_486126945-112107-142757 hallmark;refseq 40;33;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299483.1 prophage linear Cluster_0 Gammaproteobacteria_gi_486136503 hallmark;refseq 32;25;3;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299483.2 extrachromosomal linear Cluster_11 Gammaproteobacteria_gi_486136566-313-24996 hallmark;refseq 25;21;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299483.2 prophage linear Cluster_1 Gammaproteobacteria_gi_486137369 refseq 14;13;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Punalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299483.2 extrachromosomal linear Cluster_19 Gammaproteobacteria_gi_486139567-0-22271 hallmark;refseq 33;26;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299483.2 prophage linear Cluster_0 Gammaproteobacteria_gi_486147015 hallmark;refseq 22;16;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299483.3 extrachromosomal linear Cluster_11 Gammaproteobacteria_gi_486151065-656-25339 hallmark;refseq 26;22;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299483.3 prophage linear Cluster_1 Gammaproteobacteria_gi_486151545 refseq 15;14;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Punalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299483.3 extrachromosomal linear Cluster_19 Gammaproteobacteria_gi_486152670-56854-87504 hallmark;refseq 40;33;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299483.3 prophage linear Cluster_0 Gammaproteobacteria_gi_486156085-0-67889 hallmark;refseq 67;44;12;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0301867.13 prophage linear Cluster_21 Gammaproteobacteria_gi_486156453 hallmark;refseq 26;22;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0301867.13 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_486156685 refseq 31;14;9;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0301867.13 extrachromosomal linear Cluster_258 Gammaproteobacteria_gi_486158462-65813-87948 hallmark;refseq 32;27;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0301867.13 prophage linear Cluster_0 Gammaproteobacteria_gi_486160941-0-67838 hallmark;refseq 71;45;13;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0301867.2 prophage linear Cluster_21 Gammaproteobacteria_gi_486161668 hallmark;refseq 26;22;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0301867.2 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_486162058 refseq 33;16;10;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0301867.2 extrachromosomal linear Cluster_258 Gammaproteobacteria_gi_486163022-65652-87710 hallmark;refseq 31;26;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0301867.2 prophage linear Cluster_0 Gammaproteobacteria_gi_486167274-2516-14473 hallmark;refseq 20;16;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0301904.3 prophage linear Cluster_503 Gammaproteobacteria_gi_486167548 hallmark;refseq 37;28;7;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0301904.3 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_486168950-23253-57752 hallmark;refseq 51;42;4;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0302293.7 prophage linear Cluster_3 Gammaproteobacteria_gi_486169190-69166-105448 hallmark;refseq 50;39;9;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0302293.7 prophage linear Cluster_1 Gammaproteobacteria_gi_486169332-108742-130429 hallmark;refseq 26;20;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0302293.7 prophage linear Cluster_26 Gammaproteobacteria_gi_486169365 hallmark;refseq 38;28;7;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0302293.7 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_486174920 hallmark;refseq 14;10;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304799.3 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_486177740 hallmark;refseq 15;13;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304799.3 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_486185851 hallmark;refseq 18;16;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304799.3 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_486186507-94024-126054 hallmark;refseq 41;32;6;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304799.3 prophage linear Cluster_0 Gammaproteobacteria_gi_486186580 hallmark;refseq 25;20;5; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304799.3 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_486189086 hallmark;refseq 42;37;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304799.3 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_486196351 refseq 14;12;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Punalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0305260.2 extrachromosomal linear Cluster_19 Gammaproteobacteria_gi_486196369 refseq 13;8;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0305260.2 extrachromosomal linear Cluster_19 Gammaproteobacteria_gi_486196801 hallmark;refseq 15;12;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0305260.2 extrachromosomal linear Cluster_142 Gammaproteobacteria_gi_486197239-19-37455 hallmark;refseq 48;40;7;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0305260.2 prophage linear Cluster_1 Gammaproteobacteria_gi_486204603 hallmark;refseq 22;19;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli p0305293.14 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_486208434 hallmark;refseq;vdb 34;15;15;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli p0305293.14 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_486208488 hallmark;refseq 24;18;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli p0305293.14 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_486209075 hallmark;refseq 37;22;12;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli p0305293.14 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_486209561-91766-125240 hallmark;refseq 41;32;4;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli p0305293.14 prophage linear Cluster_0 Gammaproteobacteria_gi_486212477 refseq 17;10;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli p0305293.14 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_486219155 hallmark;refseq 20;18;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0302293.10 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_486225713 hallmark;refseq 17;15;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0302293.10 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_486226872 hallmark;refseq 27;20;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0302293.10 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_486227027 hallmark;refseq 34;25;1;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0302293.10 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_486250191 hallmark;refseq 34;24;7;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0302293.3 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_486251939-447397-483830 hallmark;refseq 48;34;8;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0302293.3 prophage linear Cluster_26 Gammaproteobacteria_gi_486253913-82-17914 hallmark;refseq 22;20;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0302293.3 prophage linear Cluster_1 Gammaproteobacteria_gi_486261123 hallmark;refseq 35;25;7;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0302293.4 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_486263674-447710-483728 hallmark;refseq 50;39;9;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0302293.4 prophage linear Cluster_1 Gammaproteobacteria_gi_486266382-685-19632 hallmark;refseq 22;17;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0302293.4 prophage linear Cluster_26 Gammaproteobacteria_gi_486269437-74835-110657 hallmark;refseq 50;39;9;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0302293.6 prophage linear Cluster_1 Gammaproteobacteria_gi_486270446 hallmark;refseq 50;28;15;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0302293.6 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_486276401 hallmark;refseq 28;21;2;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0302293.6 extrachromosomal linear Cluster_26 Gammaproteobacteria_gi_486285218 hallmark;refseq 35;25;7;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0302293.8 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_486288138-388008-424602 hallmark;refseq 50;38;10;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0302293.8 prophage linear Cluster_1 Gammaproteobacteria_gi_486292207-0-22179 hallmark;refseq 25;20;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0302293.8 prophage linear Cluster_26 Gammaproteobacteria_gi_486295806 hallmark;refseq 49;31;14;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0302293.9 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_486297328-157631-196490 hallmark;refseq 52;41;9;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0302293.9 prophage linear Cluster_1 Gammaproteobacteria_gi_486303603 hallmark;refseq 27;25;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0302293.9 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_486305038 hallmark;refseq 21;16;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0302293.9 extrachromosomal linear Cluster_26 Gammaproteobacteria_gi_486312351-0-16631 hallmark;refseq 20;16;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304777.11 prophage linear Cluster_2 Gammaproteobacteria_gi_486313161 hallmark;refseq 15;9;6; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304777.11 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_486316231 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304777.11 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_486319513-6367-19878 hallmark;refseq 19;16;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304777.11 prophage linear Cluster_0 Gammaproteobacteria_gi_486319823-14-26585 hallmark;refseq 35;29;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304777.11 prophage linear Cluster_0 Gammaproteobacteria_gi_486323167 hallmark;refseq 28;25;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304777.12 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_486323903 hallmark;refseq 38;24;9;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304777.12 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_486326500-6665-20140 hallmark;refseq 17;15;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304777.12 prophage linear Cluster_0 Gammaproteobacteria_gi_486326751-20425-54908 hallmark;refseq;vdb 47;16;21;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304777.12 prophage linear Cluster_0 Gammaproteobacteria_gi_486326847-0-26559 hallmark;refseq 35;29;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304777.12 prophage linear Cluster_0 Gammaproteobacteria_gi_486337599 hallmark;refseq 27;23;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304777.13 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_486338538 hallmark;refseq 27;18;8;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304777.13 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_486342035-14-26585 hallmark;refseq 35;29;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304777.13 prophage linear Cluster_0 Gammaproteobacteria_gi_486346791-950-14616 hallmark;refseq 15;13;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304777.13 prophage linear Cluster_2 Gammaproteobacteria_gi_486347964 hallmark;refseq 19;14;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304777.13 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_486355231 hallmark;refseq 25;22;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304777.15 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_486355374-5801-29474 hallmark;refseq 26;21;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304777.15 prophage linear Cluster_47 Gammaproteobacteria_gi_486355821 hallmark;refseq 29;20;8;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304777.15 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_486357878 hallmark;refseq 97;49;30;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304777.15 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_486365888 hallmark;refseq 28;25;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304777.3 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_486366294 hallmark;refseq 32;22;8;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304777.3 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_486367239-20507-32166 hallmark;refseq 15;12;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304777.3 prophage linear Cluster_0 Gammaproteobacteria_gi_486368765-0-26568 hallmark;refseq 35;29;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304777.3 prophage linear Cluster_0 Gammaproteobacteria_gi_486377405 hallmark;refseq 28;25;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304777.4 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_486378238 hallmark;refseq 34;22;10;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304777.4 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_486383322 hallmark;refseq 26;23;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304777.7 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_486383353-0-33958 hallmark;refseq 41;27;11;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304777.7 prophage linear Cluster_1 Gammaproteobacteria_gi_486386289 hallmark;refseq 19;17;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304777.8 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_486387075 hallmark;refseq 27;17;8;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304777.8 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_486398940-1553-15219 hallmark;refseq 15;13;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304777.8 prophage linear Cluster_2 Gammaproteobacteria_gi_486401423 hallmark;refseq 28;25;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304777.9 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_486401963 hallmark;refseq 30;21;7;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304777.9 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_486406545 hallmark;refseq 33;28;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304777.9 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_486410064-182408-227260 hallmark;refseq 69;59;4;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304816.10 prophage linear Cluster_81 Gammaproteobacteria_gi_486410510 hallmark;refseq 41;22;13;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304816.10 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_486412929-0-31219 hallmark;refseq 41;34;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304816.10 prophage linear Cluster_2 Gammaproteobacteria_gi_486418645 hallmark;refseq 27;17;4;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304816.10 extrachromosomal linear Cluster_26 Gammaproteobacteria_gi_486421173 hallmark;refseq 23;16;2;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304816.11 extrachromosomal linear Cluster_26 Gammaproteobacteria_gi_486424191 hallmark;refseq 21;18;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304816.11 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_486424650-182497-227349 hallmark;refseq 68;58;5;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304816.11 prophage linear Cluster_81 Gammaproteobacteria_gi_486424938-6322-28666 hallmark;refseq 29;21;6;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304816.11 prophage linear Cluster_1 Gammaproteobacteria_gi_486426919 hallmark;refseq 44;35;6;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304816.11 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_486430342-1608-16282 hallmark;refseq 16;14;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304816.12 prophage linear Cluster_2 Gammaproteobacteria_gi_486430369 hallmark;refseq 27;21;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304816.12 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_486431921 hallmark;refseq 17;14;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304816.13 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_486431936 hallmark;refseq 20;17;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304816.13 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_486432203-182481-227333 hallmark;refseq 68;59;4;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304816.13 prophage linear Cluster_81 Gammaproteobacteria_gi_486433986-0-15738 refseq 20;17;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304816.13 prophage linear Cluster_3 Gammaproteobacteria_gi_486669453 hallmark;refseq 23;17;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304816.13 extrachromosomal linear Cluster_26 Gammaproteobacteria_gi_486688359 hallmark;refseq 22;16;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304816.14 extrachromosomal linear Cluster_26 Gammaproteobacteria_gi_486723079 hallmark;refseq 23;20;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304816.15 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_486730716-182448-227300 hallmark;refseq 67;58;4;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304816.15 prophage linear Cluster_81 Gammaproteobacteria_gi_486739307 hallmark;refseq 54;27;19;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304816.15 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_486758153-0-21796 hallmark;refseq 26;20;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304816.15 prophage linear Cluster_26 Gammaproteobacteria_gi_486805832 hallmark;refseq 42;33;6;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304816.15 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_486943667 hallmark;refseq 23;17;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304816.2 extrachromosomal linear Cluster_26 Gammaproteobacteria_gi_487032974 hallmark;refseq 41;32;6;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304816.3 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_487033013 hallmark;refseq 20;18;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304816.3 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_487043268-155986-200838 hallmark;refseq 67;58;4;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304816.3 prophage linear Cluster_81 Gammaproteobacteria_gi_487052161 hallmark;refseq 29;21;6;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304816.3 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_487135233-14022-48277 hallmark;refseq 42;28;8;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304816.3 prophage linear Cluster_4 Gammaproteobacteria_gi_487137961 hallmark;refseq 23;17;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304816.5 extrachromosomal linear Cluster_26 Gammaproteobacteria_gi_487138423-182435-227287 hallmark;refseq 68;58;5;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304816.5 prophage linear Cluster_81 Gammaproteobacteria_gi_487138491 hallmark;refseq 40;22;13;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304816.5 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_487138713 hallmark;refseq 42;33;6;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304816.5 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_487146808 hallmark;refseq 20;17;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304816.7 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_487158451-182408-227260 hallmark;refseq 68;59;4;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304816.7 prophage linear Cluster_81 Gammaproteobacteria_gi_487160897-6385-28730 hallmark;refseq 30;22;6;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304816.7 prophage linear Cluster_1 Gammaproteobacteria_gi_487178728-0-21208 hallmark;refseq 26;20;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304816.7 prophage linear Cluster_26 Gammaproteobacteria_gi_487179791 hallmark;refseq 43;33;7;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304816.7 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_487310784-182467-227319 hallmark;refseq 68;59;4;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304816.8 prophage linear Cluster_81 Gammaproteobacteria_gi_487338385 hallmark;refseq 44;34;7;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304816.8 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_487358973 hallmark;refseq 43;34;5;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304816.9 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_487358986 hallmark;refseq 20;17;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304816.9 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_487359072-182447-227299 hallmark;refseq 69;59;5;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304816.9 prophage linear Cluster_81 Gammaproteobacteria_gi_487359126 hallmark;refseq 30;21;7;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304816.9 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_487360065 hallmark;refseq 23;17;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304816.9 extrachromosomal linear Cluster_26 Gammaproteobacteria_gi_487360925-130-40794 hallmark;refseq 51;40;9;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0305260.10 prophage linear Cluster_1 Gammaproteobacteria_gi_487361153 hallmark;refseq 56;29;18;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0305260.10 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_487362369 hallmark;refseq 15;12;;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0305260.10 extrachromosomal linear Cluster_26 Gammaproteobacteria_gi_487362396 refseq 14;12;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Punalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0305260.10 extrachromosomal linear Cluster_19 Gammaproteobacteria_gi_487362795-130-40794 hallmark;refseq 51;40;9;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0305260.11 prophage linear Cluster_1 Gammaproteobacteria_gi_487364160 hallmark;refseq 16;13;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0305260.11 extrachromosomal linear Cluster_26 Gammaproteobacteria_gi_487364295 refseq 13;11;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Punalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0305260.11 extrachromosomal linear Cluster_19 Gammaproteobacteria_gi_487364868 hallmark;refseq 34;23;11; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0305260.12 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_487365127 hallmark;refseq 15;12;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0305260.12 extrachromosomal linear Cluster_142 Gammaproteobacteria_gi_487365942 refseq 14;12;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Punalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0305260.12 extrachromosomal linear Cluster_19 Gammaproteobacteria_gi_487367203-3077-16869 hallmark;refseq 18;17;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0305260.13 prophage linear Cluster_1 Gammaproteobacteria_gi_487367374 hallmark;refseq 60;31;20;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0305260.13 extrachromosomal circular Cluster_1 Gammaproteobacteria_gi_487367944 hallmark;refseq 15;12;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0305260.13 extrachromosomal linear Cluster_142 Gammaproteobacteria_gi_487368674 refseq 15;8;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0305260.13 extrachromosomal linear Cluster_19 Gammaproteobacteria_gi_487368820 refseq 14;12;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Punalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0305260.13 extrachromosomal linear Cluster_19 Gammaproteobacteria_gi_487369038-0-39440 hallmark;refseq 50;41;8;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0305260.15 prophage linear Cluster_1 Gammaproteobacteria_gi_487369986 hallmark;refseq 15;12;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0305260.15 extrachromosomal linear Cluster_142 Gammaproteobacteria_gi_487370735 refseq 15;12;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Punalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0305260.15 extrachromosomal linear Cluster_19 Gammaproteobacteria_gi_487371088-0-31685 hallmark;refseq 36;29;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0305260.3 prophage linear Cluster_1 Gammaproteobacteria_gi_487372032 hallmark;refseq 16;13;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0305260.3 extrachromosomal linear Cluster_142 Gammaproteobacteria_gi_487372696 refseq 14;12;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Punalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0305260.3 extrachromosomal linear Cluster_19 Gammaproteobacteria_gi_487373462 hallmark;refseq 58;32;17;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0305260.4 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_487374700 hallmark;refseq 17;12;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0305260.4 extrachromosomal linear Cluster_26 Gammaproteobacteria_gi_487374822 refseq 14;12;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Punalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0305260.4 extrachromosomal linear Cluster_19 Gammaproteobacteria_gi_487374841 refseq 21;18;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Punalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0305260.4 extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_487375067 hallmark 15;6;;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Phic3unalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;unknown;unknown;unknown gamma proteobacterium SCGC AAA160-D02 extrachromosomal linear Cluster_323 Gammaproteobacteria_gi_487375224-342-31526 hallmark;refseq 35;28;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0305260.5 prophage linear Cluster_1 Gammaproteobacteria_gi_487375457 hallmark;refseq 56;29;18;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0305260.5 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_487376016 refseq 31;16;1;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;unknown;unknown;unknown gamma proteobacterium SCGC AAA160-D02 extrachromosomal linear Cluster_323 Gammaproteobacteria_gi_487376648 hallmark;refseq 15;12;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0305260.5 extrachromosomal linear Cluster_142 Gammaproteobacteria_gi_487376857 refseq 14;12;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Punalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0305260.5 extrachromosomal linear Cluster_19 Gammaproteobacteria_gi_487378845-2285-10146 refseq 13;10;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0305260.6 prophage linear Cluster_1 Gammaproteobacteria_gi_487378959 hallmark;refseq 56;29;19;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0305260.6 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_487379268 hallmark;refseq 15;12;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0305260.6 extrachromosomal linear Cluster_142 Gammaproteobacteria_gi_487379941 refseq 14;12;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Punalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0305260.6 extrachromosomal linear Cluster_19 Gammaproteobacteria_gi_487380140-0-31651 hallmark;refseq 36;29;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0305260.7 prophage linear Cluster_1 Gammaproteobacteria_gi_487380374 refseq 28;12;9;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0305260.7 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_487380379 hallmark;refseq 28;16;10;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0305260.7 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_487380515 refseq 22;18;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Punalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0305260.7 extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_487381214 hallmark;refseq 15;12;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0305260.7 extrachromosomal linear Cluster_142 Gammaproteobacteria_gi_487381257 refseq 14;12;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Punalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0305260.7 extrachromosomal linear Cluster_19 Gammaproteobacteria_gi_487381492 refseq 15;12;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Punalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0305260.8 extrachromosomal linear Cluster_19 Gammaproteobacteria_gi_487381539 hallmark;refseq 14;11;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0305260.8 extrachromosomal linear Cluster_26 Gammaproteobacteria_gi_487381827 hallmark;refseq 53;28;17;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0305260.8 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_487383077 hallmark;refseq 31;27;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0305260.9 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_487383163 hallmark;refseq 54;28;17;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0305260.9 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_487384232 hallmark;refseq 15;12;;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0305260.9 extrachromosomal linear Cluster_26 Gammaproteobacteria_gi_487384364 refseq 14;12;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Punalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0305260.9 extrachromosomal linear Cluster_19 Gammaproteobacteria_gi_487385616-3069-10408 hallmark;refseq 14;12;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli p0305293.10 prophage linear Cluster_1 Gammaproteobacteria_gi_487385722 hallmark;refseq 29;21;5;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli p0305293.10 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_487386082 refseq 22;14;4;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli p0305293.10 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_487386166 hallmark;refseq 11;8;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli p0305293.10 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_487386267 hallmark;refseq 17;11;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli p0305293.10 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_487386321 hallmark;refseq 34;21;11;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli p0305293.10 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_487387759 hallmark;refseq 16;13;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli p0305293.10 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_487388414 hallmark;refseq 18;16;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli p0305293.11 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_487388801 refseq 16;13;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli p0305293.11 extrachromosomal linear Cluster_230 Gammaproteobacteria_gi_487389500 hallmark;refseq 36;28;5;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli p0305293.11 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_487389548 hallmark;refseq 30;21;5;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli p0305293.11 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_487389662 hallmark;refseq 26;17;9; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli p0305293.11 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_487389874 refseq 19;17;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli p0305293.11 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_487391772 hallmark;refseq 17;14;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli p0305293.12 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_487392353 hallmark;refseq 14;12;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli p0305293.12 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_487392423 hallmark;refseq 32;23;6;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli p0305293.12 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_487392574 hallmark;refseq 25;13;9;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli p0305293.12 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_487392590 hallmark;refseq 34;21;11;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli p0305293.12 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_487394124-4109-17047 refseq 15;10;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli p0305293.12 prophage linear Cluster_10 Gammaproteobacteria_gi_487394310-419-15585 hallmark;refseq 20;19;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli p0305293.15 prophage linear Cluster_1 Gammaproteobacteria_gi_487394333 hallmark;refseq 14;9;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli p0305293.15 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_487394405 hallmark;refseq 44;23;15;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli p0305293.15 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_487394409 hallmark;refseq;vdb 31;15;12;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli p0305293.15 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_487395062-67269-93064 hallmark;refseq 41;32;7;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli p0305293.15 prophage linear Cluster_0 Gammaproteobacteria_gi_487395796 hallmark;refseq 22;18;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli p0305293.15 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_487395850 hallmark;refseq 16;14;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli p0305293.2 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_487396225-8462-27879 hallmark;refseq 29;25;1;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli p0305293.2 prophage linear Cluster_0 Gammaproteobacteria_gi_487396266 hallmark;refseq 41;23;15;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli p0305293.2 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_487396844-49844-71053 hallmark;refseq 29;26;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli p0305293.2 prophage linear Cluster_10 Gammaproteobacteria_gi_487397162 hallmark;refseq 15;13;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli p0305293.3 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_487397237 hallmark;refseq 19;15;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli p0305293.3 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_487397534-5080-21094 hallmark;refseq 21;20;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli p0305293.3 prophage linear Cluster_0 Gammaproteobacteria_gi_487398395 hallmark;refseq 17;15;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli p0305293.4 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_487398887 hallmark;refseq 15;11;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli p0305293.4 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_487400193 refseq 21;18;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli p0305293.5 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_487400202 hallmark;refseq 17;13;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli p0305293.5 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_487400375 hallmark;refseq 23;19;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli p0305293.5 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_487400414 hallmark;refseq 45;23;17;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli p0305293.5 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_487400417 hallmark;refseq;vdb 34;15;15;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli p0305293.5 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_487400497 refseq 19;17;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli p0305293.5 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_487400911-67265-79538 hallmark;refseq 16;14;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli p0305293.5 prophage linear Cluster_0 Gammaproteobacteria_gi_487401429 hallmark;refseq 20;18;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli p0305293.6 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_487401484 hallmark;refseq 23;18;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli p0305293.6 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_487403532 refseq 17;15;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli p0305293.6 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_487404227 hallmark;refseq 20;17;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli p0305293.7 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_487404302 hallmark;refseq 27;20;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli p0305293.7 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_487404312 hallmark;refseq 12;9;;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli p0305293.7 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_487404411 hallmark;refseq 40;23;14;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli p0305293.7 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_487404425 hallmark;refseq 16;10;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli p0305293.7 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_487405768 hallmark;refseq 20;17;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli p0305293.8 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_487406055 hallmark;refseq 41;23;14;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli p0305293.8 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_487406305-92033-116367 hallmark;refseq 35;28;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli p0305293.8 prophage linear Cluster_0 Gammaproteobacteria_gi_487406782-4167-30901 hallmark;refseq 36;26;6;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli p0305293.8 prophage linear Cluster_1 Gammaproteobacteria_gi_487407466 hallmark;refseq 27;18;9; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli p0305293.9 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_487407636 refseq 17;16;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli p0305293.9 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_487409605 hallmark;refseq 14;8;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MP021552.7 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_487409707 hallmark;refseq 101;91;2;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MP021552.7 extrachromosomal circular Cluster_16 Gammaproteobacteria_gi_487410588 refseq 19;12;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MP021552.7 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_487410663-0-32525 hallmark;refseq 45;42;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MP021552.7 prophage linear Cluster_3 Gammaproteobacteria_gi_487410887 hallmark;refseq 36;17;13;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MP021552.7 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_487410902 refseq 10;7;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MP021552.7 extrachromosomal linear Cluster_47 Gammaproteobacteria_gi_487413245 hallmark;refseq 48;43;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MP021552.12 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_487413361 hallmark;refseq 37;24;11;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MP021552.12 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_487413495 refseq 17;15;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MP021552.12 extrachromosomal linear Cluster_158 Gammaproteobacteria_gi_487414801 hallmark;refseq 100;90;2;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MP021552.12 extrachromosomal circular Cluster_16 Gammaproteobacteria_gi_487416352 refseq 18;17;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MP021552.11 extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_487416392 refseq 10;9;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MP021552.11 extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_487416679 hallmark;refseq 48;43;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MP021552.11 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_487416781 hallmark;refseq 68;59;1;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MP021552.11 extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_487417693 refseq 18;10;6;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MP021017.9 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_487419023 hallmark;refseq 29;26;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MP021017.9 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_487424735 hallmark;refseq 31;27;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MP021017.6 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_487430315 hallmark;refseq 28;26;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MP021017.5 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_487430735 hallmark;refseq 29;26;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MP021017.4 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_487432984 refseq 18;10;6;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MP021017.4 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_487438321 hallmark;refseq 28;26;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MP021017.3 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_487440311 refseq 20;11;7;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MP021017.3 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_487444984 hallmark;refseq 31;27;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MP021017.2 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_487446155 refseq 20;11;7;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MP021017.2 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_487455679 hallmark;refseq 48;23;11;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MP021017.12 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_487455807 hallmark;refseq 34;17;9;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MP021017.12 extrachromosomal linear Cluster_28 Gammaproteobacteria_gi_487455911 hallmark;refseq 31;27;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MP021017.12 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_487460784 hallmark;refseq 29;26;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MP021017.11 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_487462485 hallmark;refseq 31;27;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MP021017.10 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_487469339 hallmark;refseq 16;11;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli C-34666 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_487471685 refseq 22;16;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli BCE034_MS-14 extrachromosomal linear Cluster_19 Gammaproteobacteria_gi_487471758 hallmark;refseq 21;16;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli BCE034_MS-14 extrachromosomal linear Cluster_26 Gammaproteobacteria_gi_487472428 hallmark;refseq 37;29;5;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli BCE034_MS-14 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_487472749 hallmark;refseq 28;21;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli BCE034_MS-14 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_487473928-60331-92398 hallmark;refseq 40;34;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli BCE034_MS-14 prophage linear Cluster_0 Gammaproteobacteria_gi_487474153-0-62062 hallmark;refseq 55;30;11;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli BCE034_MS-14 prophage linear Cluster_0 Gammaproteobacteria_gi_487474203 refseq 14;10;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli BCE034_MS-14 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_487481946 hallmark;refseq 40;30;7;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli BCE019_MS-13 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_487484728 refseq 33;15;6;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli BCE019_MS-13 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_487488429-25865-54398 hallmark;refseq 39;31;7;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli BCE002_MS12 prophage linear Cluster_2 Gammaproteobacteria_gi_487490780-244484-281194 hallmark;refseq 54;45;6;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli BCE002_MS12 prophage linear Cluster_11 Gammaproteobacteria_gi_487490780-353714-388608 hallmark;refseq 54;43;7;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli BCE002_MS12 prophage linear Cluster_1 Gammaproteobacteria_gi_487493770-0-10239 noncaudo 12;3;2;7 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2875000 prophage linear Cluster_51 Gammaproteobacteria_gi_487496329 hallmark;refseq 52;38;10;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2875000 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_487498020-22959-51376 hallmark;refseq 36;25;2;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2875000 prophage linear Cluster_11 Gammaproteobacteria_gi_487501071 refseq 29;19;7;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2872800 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_487501951-23147-51528 hallmark;refseq 37;25;2;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2872800 prophage linear Cluster_11 Gammaproteobacteria_gi_487503816-2909-13563 hallmark;refseq 15;14;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2872000 prophage linear Cluster_0 Gammaproteobacteria_gi_487503852 hallmark;refseq 22;17;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2872000 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_487504222 hallmark;refseq 68;32;15;21 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2872000 extrachromosomal linear Cluster_48 Gammaproteobacteria_gi_487504664-2303-10516 hallmark;noncaudo 13;7;;6 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2872000 prophage linear Cluster_36 Gammaproteobacteria_gi_487504994-84939-98601 hallmark;refseq 16;15;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2872000 prophage linear Cluster_0 Gammaproteobacteria_gi_487505029-21566-58471 hallmark;refseq 53;39;7;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2872000 prophage linear Cluster_21 Gammaproteobacteria_gi_487506376 hallmark;refseq 21;14;3;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2872000 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_487507332 hallmark;refseq 14;11;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2871950 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_487507756 hallmark;refseq 71;35;15;21 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2871950 extrachromosomal circular Cluster_48 Gammaproteobacteria_gi_487508083-2267-10480 hallmark;noncaudo 13;7;;6 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2871950 prophage linear Cluster_36 Gammaproteobacteria_gi_487508586 hallmark;refseq 84;52;23;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2871950 extrachromosomal linear Cluster_21 Gammaproteobacteria_gi_487513384 refseq 29;19;7;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2867750 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_487514387-22985-51402 hallmark;refseq 37;25;2;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2867750 prophage linear Cluster_11 Gammaproteobacteria_gi_487517913 refseq 29;19;7;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2866750 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_487518855-23084-51501 hallmark;refseq 37;25;2;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2866750 prophage linear Cluster_11 Gammaproteobacteria_gi_487521455 hallmark;refseq 11;6;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2866550 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_487522667 hallmark;refseq 56;41;11;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2866550 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_487522790 hallmark;refseq 23;17;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2866550 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_487523608-22985-51402 hallmark;refseq 36;25;2;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2866550 prophage linear Cluster_11 Gammaproteobacteria_gi_487523853 hallmark;refseq 49;24;11;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2866550 extrachromosomal linear Cluster_28 Gammaproteobacteria_gi_487525771 noncaudo 14;3;3;8 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2866450 extrachromosomal linear Cluster_51 Gammaproteobacteria_gi_487525855 hallmark;refseq 17;15;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2866450 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_487526694-23444-57314 hallmark;refseq 46;33;10;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2865200 prophage linear Cluster_4 Gammaproteobacteria_gi_487527297 hallmark;refseq 39;25;7;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2865200 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_487531239 refseq 41;28;9;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2865200 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_487531674 refseq 25;20;3;2 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2865200 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_487531858 hallmark;refseq 16;13;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2865200 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_487533276 hallmark;refseq 14;8;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2860050 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_487533634 hallmark;refseq 42;23;15;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2860050 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_487533783 hallmark;refseq 23;19;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2860050 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_487534941-0-10484 hallmark;refseq 13;12;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2860050 prophage linear Cluster_0 Gammaproteobacteria_gi_487535246-25654-62555 hallmark;refseq 47;38;5;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2860050 prophage linear Cluster_0 Gammaproteobacteria_gi_487535980-3887-17759 hallmark;refseq 16;11;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2860050 prophage linear Cluster_10 Gammaproteobacteria_gi_487537598 hallmark;refseq 16;13;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2860050 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_487540792 hallmark;refseq 48;34;9;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2853500 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_487541710-23045-51426 hallmark;refseq 37;25;2;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2853500 prophage linear Cluster_11 Gammaproteobacteria_gi_487543747 refseq 20;12;2;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2851500 extrachromosomal linear Cluster_17 Gammaproteobacteria_gi_487543881 noncaudo 15;3;3;9 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2851500 extrachromosomal linear Cluster_51 Gammaproteobacteria_gi_487545880 hallmark;refseq 36;27;6;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2851500 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_487548899-67280-98327 hallmark;refseq 41;35;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2851500 prophage linear Cluster_0 Gammaproteobacteria_gi_487551465 hallmark;refseq 30;20;7;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2850750 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_487551730 hallmark;refseq 22;20;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2850750 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_487552953-23004-51421 hallmark;refseq 36;25;2;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2850750 prophage linear Cluster_11 Gammaproteobacteria_gi_487555291 refseq 29;19;7;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2850400 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_487555472 refseq 15;10;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2850400 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_487556065 hallmark;refseq 50;25;12;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2850400 extrachromosomal linear Cluster_28 Gammaproteobacteria_gi_487556521-22999-51380 hallmark;refseq 37;25;2;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2850400 prophage linear Cluster_11 Gammaproteobacteria_gi_487560257-24166-31664 noncaudo 10;2;1;7 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2848050 prophage linear Cluster_270 Gammaproteobacteria_gi_487561084-23042-51767 hallmark;refseq 36;28;4;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2848050 prophage linear Cluster_11 Gammaproteobacteria_gi_487561207 refseq 16;10;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2848050 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_487562652 hallmark;refseq 56;42;5;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2848050 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_487563143 hallmark;refseq 25;20;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2848050 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_487563172 noncaudo 9;2;1;6 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2848050 extrachromosomal circular Cluster_270 Gammaproteobacteria_gi_487563381 refseq 54;45;3;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2848050 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_487566515 hallmark;refseq 40;12;13;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2845650 extrachromosomal linear Cluster_483 Gammaproteobacteria_gi_487568275-69428-101262 hallmark;refseq 40;33;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2845650 prophage linear Cluster_0 Gammaproteobacteria_gi_487570687 hallmark;refseq 55;38;8;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2845350 extrachromosomal linear Cluster_21 Gammaproteobacteria_gi_487570962 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2845350 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_487574767-26082-49867 hallmark;refseq 33;24;7;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2788150 prophage linear Cluster_1 Gammaproteobacteria_gi_487574856 hallmark;refseq 25;17;6;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2788150 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_487575522-75417-106483 hallmark;refseq 45;43;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2788150 prophage linear Cluster_3 Gammaproteobacteria_gi_487576105-3896-19311 hallmark;refseq 17;14;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2788150 prophage linear Cluster_2 Gammaproteobacteria_gi_487577448-17680-53062 hallmark;refseq;vdb 52;25;9;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2788150 prophage linear Cluster_72 Gammaproteobacteria_gi_487578153 hallmark;refseq 13;9;1;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2788150 extrachromosomal linear Cluster_26 Gammaproteobacteria_gi_487580686 hallmark;refseq 26;20;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2785200 extrachromosomal linear Cluster_26 Gammaproteobacteria_gi_487581740-164157-186044 hallmark;refseq 31;24;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2785200 prophage linear Cluster_2 Gammaproteobacteria_gi_487582029-80787-97168 hallmark;refseq 20;19;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2785200 prophage linear Cluster_1 Gammaproteobacteria_gi_487585238 hallmark;refseq 24;17;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2780750 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_487587182-27589-41157 hallmark;refseq 16;13;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2780750 prophage linear Cluster_22 Gammaproteobacteria_gi_487587426-0-31607 hallmark;refseq 45;43;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2780750 prophage linear Cluster_3 Gammaproteobacteria_gi_487588810 hallmark;refseq 18;16;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2770900 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_487588918 hallmark;refseq 12;9;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2770900 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_487589130 hallmark;refseq 42;25;14;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2770900 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_487589952-25549-62271 hallmark;refseq 46;37;4;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2770900 prophage linear Cluster_0 Gammaproteobacteria_gi_487591023-67390-83526 hallmark;refseq 27;22;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2770900 prophage linear Cluster_0 Gammaproteobacteria_gi_487591201-4129-19067 hallmark;refseq 17;12;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2770900 prophage linear Cluster_10 Gammaproteobacteria_gi_487596043-0-4835 noncaudo 7;3;;4 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2756500 prophage linear Cluster_51 Gammaproteobacteria_gi_487597389 refseq 16;10;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2756500 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_487597973 hallmark;refseq 39;20;11;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2756500 extrachromosomal linear Cluster_28 Gammaproteobacteria_gi_487598823-22916-51694 hallmark;refseq;vdb 38;25;2;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2756500 prophage linear Cluster_11 Gammaproteobacteria_gi_487599760-51121-83473 hallmark;refseq 45;35;7;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2749250 prophage linear Cluster_2 Gammaproteobacteria_gi_487599933 hallmark;refseq 21;18;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2749250 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_487600290 refseq 31;12;15;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2749250 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_487600302 hallmark;refseq 23;15;7;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2749250 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_487601120-67028-101054 hallmark;refseq 41;34;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2749250 prophage linear Cluster_0 Gammaproteobacteria_gi_487604004 refseq 8;5;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2749250 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_487605321 hallmark;refseq 16;13;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2747800 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_487605417 hallmark;refseq 21;16;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2747800 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_487605446 hallmark;refseq 11;8;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2747800 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_487605739 hallmark;refseq 24;12;9;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2747800 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_487607951-0-13307 hallmark;refseq 20;12;4;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2747800 prophage linear Cluster_10 Gammaproteobacteria_gi_487608429 hallmark;refseq 23;18;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2747800 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_487610524 hallmark;refseq 19;15;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2731150 extrachromosomal linear Cluster_47 Gammaproteobacteria_gi_487610579 hallmark;refseq 25;17;5;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2731150 extrachromosomal linear Cluster_11 Gammaproteobacteria_gi_487611727-0-37221 hallmark;refseq 51;21;11;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2731150 prophage linear Cluster_0 Gammaproteobacteria_gi_487611956 hallmark;refseq 31;21;7;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2731150 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_487611971 hallmark;refseq 20;18;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2731150 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_487612689-35539-60442 hallmark;refseq 31;28;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2731150 prophage linear Cluster_3 Gammaproteobacteria_gi_487613461-14147-45687 hallmark;refseq 38;33;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2731150 prophage linear Cluster_0 Gammaproteobacteria_gi_487616072 hallmark;refseq 28;23;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2729250 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_487616452 hallmark;refseq 29;20;9; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2729250 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_487616464 hallmark;refseq 17;11;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2729250 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_487617541 hallmark;refseq 19;15;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2729250 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_487621918-42808-73589 hallmark;refseq 47;20;14;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2726950 prophage linear Cluster_28 Gammaproteobacteria_gi_487622977 refseq 15;8;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2726950 extrachromosomal linear Cluster_19 Gammaproteobacteria_gi_487626185-63185-102665 hallmark;refseq 61;26;20;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2722950 prophage linear Cluster_28 Gammaproteobacteria_gi_487629050 hallmark;refseq 20;13;7; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 199900.1 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_487629468-5979-19645 hallmark;refseq 15;13;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 199900.1 prophage linear Cluster_2 Gammaproteobacteria_gi_487629852 hallmark;refseq 36;30;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 199900.1 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_487629993 refseq 25;10;11;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 199900.1 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_487630853-6468-19439 hallmark;refseq 14;12;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 199900.1 prophage linear Cluster_0 Gammaproteobacteria_gi_487631006-0-26268 hallmark;refseq 34;29;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 199900.1 prophage linear Cluster_0 Gammaproteobacteria_gi_487632580-5768-24723 hallmark;refseq 24;19;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 180600 prophage linear Cluster_2 Gammaproteobacteria_gi_487633183 hallmark;refseq 29;26;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 180600 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_487633254 hallmark;refseq 40;23;13;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 180600 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_487633573-14-26585 hallmark;refseq 35;29;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 180600 prophage linear Cluster_0 Gammaproteobacteria_gi_487636178 hallmark;refseq 21;17;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 180050 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_487636783 hallmark;refseq 33;20;11;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 180050 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_487641221-493365-523916 hallmark;refseq 42;31;9;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli ThroopD prophage linear Cluster_1 Gammaproteobacteria_gi_487642170-29624-62538 hallmark;refseq 47;38;4;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli ThroopD prophage linear Cluster_0 Gammaproteobacteria_gi_487642454-64356-98623 hallmark;refseq 45;37;5;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli ThroopD prophage linear Cluster_0 Gammaproteobacteria_gi_487644005 hallmark;refseq 25;19;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli ThroopD extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_487644454 refseq 15;12;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli p0305293.1 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_487645043 hallmark;refseq 20;18;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli p0305293.1 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_487645208 hallmark;refseq 21;16;5; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli p0305293.1 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_487645932-1392-38120 hallmark;refseq 45;39;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli p0305293.1 prophage linear Cluster_2 Gammaproteobacteria_gi_487645946 hallmark;refseq 19;12;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli p0305293.1 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_487646064-102180-145846 hallmark;refseq 55;43;10;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0305260.1 prophage linear Cluster_1 Gammaproteobacteria_gi_487646111-75103-107895 hallmark;refseq 48;36;9;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0305260.1 prophage linear Cluster_142 Gammaproteobacteria_gi_487648750-327511-372363 hallmark;refseq 66;58;4;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304816.1 prophage linear Cluster_81 Gammaproteobacteria_gi_487649568 hallmark;refseq 17;13;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304777.1 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_487649675 hallmark;refseq 19;14;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304777.1 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_487649940 hallmark;refseq 20;15;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304777.1 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_487652163-75552-109808 hallmark;refseq 48;37;8;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0302293.2 prophage linear Cluster_1 Gammaproteobacteria_gi_487653719 hallmark;refseq 102;92;2;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299917.1 extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_487653816-70873-114496 hallmark;refseq 57;44;10;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299917.1 prophage linear Cluster_1 Gammaproteobacteria_gi_487653816-784418-819445 hallmark;refseq 48;45;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299917.1 prophage linear Cluster_3 Gammaproteobacteria_gi_487653831 hallmark;refseq 57;22;14;21 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299917.1 extrachromosomal linear Cluster_481 Gammaproteobacteria_gi_487654485-158586-194956 hallmark;refseq 44;34;5;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299917.1 prophage linear Cluster_0 Gammaproteobacteria_gi_487656782 hallmark;refseq;vdb 26;16;8;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299917.1 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_487657108 refseq 26;21;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299438.2 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_487657130 hallmark;refseq 33;21;10;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299438.2 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_487657274-4028-18581 hallmark;refseq 18;15;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299438.2 prophage linear Cluster_142 Gammaproteobacteria_gi_487657320-13730-74979 refseq 71;48;13;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0299438.2 prophage linear Cluster_19 Gammaproteobacteria_gi_487658099-68840-79371 hallmark;refseq 14;12;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0298942.1 prophage linear Cluster_21 Gammaproteobacteria_gi_487658205-40129-89714 hallmark;refseq 63;42;17;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0298942.1 prophage linear Cluster_1 Gammaproteobacteria_gi_487659181 hallmark;refseq 57;40;8;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0298942.1 extrachromosomal linear Cluster_21 Gammaproteobacteria_gi_487662246-84144-119126 hallmark;refseq 54;44;6;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MP021561.2 prophage linear Cluster_3 Gammaproteobacteria_gi_487662708-254457-285177 hallmark;refseq 42;35;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MP021561.2 prophage linear Cluster_0 Gammaproteobacteria_gi_487662708-72463-107111 hallmark;refseq 51;38;9;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MP021561.2 prophage linear Cluster_1 Gammaproteobacteria_gi_487663179-452641-500240 hallmark;refseq 72;53;4;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MP021561.2 prophage linear Cluster_25 Gammaproteobacteria_gi_487663634 hallmark;refseq 48;43;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MP021552.8 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_487665203 hallmark;refseq 102;92;2;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MP021552.8 extrachromosomal circular Cluster_16 Gammaproteobacteria_gi_487669435-218720-231700 hallmark;refseq 20;15;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MP020980.2 prophage linear Cluster_0 Gammaproteobacteria_gi_487669486 hallmark;refseq 67;50;10;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MP020980.2 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_487669520 hallmark;refseq 23;16;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MP020980.2 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_487669602 hallmark;refseq 53;28;14;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MP020980.2 extrachromosomal circular Cluster_2 Gammaproteobacteria_gi_487669717-66651-73656 hallmark 7;7;; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MP020980.2 prophage linear Cluster_0 Gammaproteobacteria_gi_487669797-705-13135 hallmark;refseq 14;12;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MP020980.2 prophage linear Cluster_0 Gammaproteobacteria_gi_487669913 refseq 16;8;6;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MP020980.2 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_487670011-70314-82684 hallmark;refseq 17;15;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MP020980.2 prophage linear Cluster_0 Gammaproteobacteria_gi_487670042-30559-44127 hallmark;refseq 16;13;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MP020980.2 prophage linear Cluster_22 Gammaproteobacteria_gi_487670114 hallmark;refseq 21;17;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MP020980.2 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_487670184 hallmark;refseq 118;96;9;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MP020980.2 extrachromosomal circular Cluster_9 Gammaproteobacteria_gi_487670572-322464-367316 hallmark;refseq 69;59;5;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MP020940.1 prophage linear Cluster_81 Gammaproteobacteria_gi_487670587 hallmark;refseq 28;20;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MP020940.1 extrachromosomal linear Cluster_26 Gammaproteobacteria_gi_487670957 hallmark;refseq 24;20;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli Jurua 18/11 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_487671041-536018-580278 hallmark;refseq 56;42;11;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli Jurua 18/11 prophage linear Cluster_1 Gammaproteobacteria_gi_487671041-728719-761629 hallmark;refseq 41;33;6;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli Jurua 18/11 prophage linear Cluster_0 Gammaproteobacteria_gi_487671597 hallmark;refseq 18;16;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli Envira 8/11 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_487671840 refseq 12;7;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli Envira 8/11 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_487672023 hallmark;refseq 50;24;20;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli Envira 8/11 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_487672043 hallmark;refseq;vdb 51;29;18;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli Envira 8/11 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_487673598-23869-42296 hallmark;refseq 27;22;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2726800 prophage linear Cluster_3 Gammaproteobacteria_gi_487673717 hallmark;refseq 47;39;7;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2726800 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_487674234 hallmark;refseq 108;74;28;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2726800 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_487674765 hallmark;refseq 27;19;4;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2720900 extrachromosomal linear Cluster_26 Gammaproteobacteria_gi_487675664 hallmark;refseq 20;18;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2720900 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_487676669 hallmark;refseq 46;38;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 201600.1 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_487676720-178976-203231 hallmark;refseq 35;26;6;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 201600.1 prophage linear Cluster_0 Gammaproteobacteria_gi_487676924-0-23341 hallmark;refseq 29;22;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 201600.1 prophage linear Cluster_0 Gammaproteobacteria_gi_487677208-70529-80957 hallmark;refseq 16;13;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 201600.1 prophage linear Cluster_0 Gammaproteobacteria_gi_487677720-440-7668 hallmark;noncaudo 9;3;1;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli BCE008_MS-13 prophage linear Cluster_270 Gammaproteobacteria_gi_487678398-0-66836 hallmark;refseq 91;59;16;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli BCE007_MS-11 prophage linear Cluster_0 Gammaproteobacteria_gi_487678883-11526-18453 hallmark;vdb 10;7;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli BCE007_MS-11 prophage linear Cluster_0 Gammaproteobacteria_gi_487679061-288806-331975 hallmark;refseq 59;46;8;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli BCE001_MS16 prophage linear Cluster_1 Gammaproteobacteria_gi_487679155-591356-628066 hallmark;refseq 55;45;7;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli BCE001_MS16 prophage linear Cluster_11 Gammaproteobacteria_gi_487679961-1886772-1919488 hallmark;refseq 40;34;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli SWW33 prophage linear Cluster_0 Gammaproteobacteria_gi_487679961-47937-81777 hallmark;refseq 52;42;3;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli SWW33 prophage linear Cluster_3 Gammaproteobacteria_gi_487681003 refseq 16;10;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2735000 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_487681099 refseq 13;9;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2735000 extrachromosomal linear Cluster_47 Gammaproteobacteria_gi_487681646-67074-98122 hallmark;refseq 41;35;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2735000 prophage linear Cluster_0 Gammaproteobacteria_gi_487681819-4099-12779 noncaudo 11;3;1;7 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2735000 prophage linear Cluster_51 Gammaproteobacteria_gi_487682022 hallmark;refseq 22;15;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 174900 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_487682393 hallmark;refseq 17;14;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 174900 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_487682400 hallmark;refseq 20;17;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 174900 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_487682636 hallmark;refseq 18;17;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 174900 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_487683819 hallmark;refseq 23;20;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 178200 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_487685982 hallmark;refseq 17;14;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 178200 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_487686348 hallmark;refseq 17;12;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 178200 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_487955243 refseq 4;4;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae CP1110 extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_487963474 refseq 4;4;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae CP1115 extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_487967820 refseq 4;4;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae CP1111 extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_487975185 refseq 4;4;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae CP1112 extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_487982338 refseq 4;4;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae CP1113 extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_487986371 refseq 4;4;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae CP1114 extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_487989741 refseq 4;4;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae CP1117 extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_487995428 refseq 4;4;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae CP1116 extrachromosomal linear Cluster_12 Gammaproteobacteria_gi_488652559-3501103-3534660 hallmark;refseq 45;34;5;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhi str. Ty21a prophage linear Cluster_0 Gammaproteobacteria_gi_488898121 hallmark;refseq 39;24;7;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas fragariae LMG 25863 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_488985661-940-24453 hallmark;refseq 31;23;2;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KpMDU1 prophage linear Cluster_0 Gammaproteobacteria_gi_489044889 noncaudo 12;3;1;8 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella "Salmonella enterica subsp. houtenae serovar 16:z4,z32:-- str. RKS3027" extrachromosomal circular Cluster_51 Gammaproteobacteria_gi_489052422 hallmark;refseq 43;21;4;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH26 extrachromosomal linear Cluster_53 Gammaproteobacteria_gi_489052885 hallmark;refseq 101;42;6;53 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH26 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_489055546 hallmark;refseq 19;15;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH26 extrachromosomal linear Cluster_24 Gammaproteobacteria_gi_489055629 refseq 36;15;5;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH26 extrachromosomal linear Cluster_38 Gammaproteobacteria_gi_489057112 hallmark;refseq 18;17;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH26 extrachromosomal linear Cluster_46 Gammaproteobacteria_gi_489057227 refseq 15;9;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH26 extrachromosomal linear Cluster_267 Gammaproteobacteria_gi_489057669 refseq 19;13;1;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH26 extrachromosomal linear Cluster_189 Gammaproteobacteria_gi_489057705 hallmark 34;13;11;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH26 extrachromosomal linear Cluster_28 Gammaproteobacteria_gi_489123953 noncaudo 12;4;1;7 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Citrobacter Citrobacter freundii GTC 09629 extrachromosomal linear Cluster_51 Gammaproteobacteria_gi_489199027-9179-40374 hallmark;refseq 42;23;;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH5 prophage linear Cluster_93 Gammaproteobacteria_gi_489199234-3576-16999 refseq 25;11;2;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH5 prophage linear Cluster_346 Gammaproteobacteria_gi_489199916 hallmark;noncaudo 11;3;;8 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH5 extrachromosomal linear Cluster_232 Gammaproteobacteria_gi_489204623-33912-70009 hallmark;refseq 50;27;9;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH6 prophage linear Cluster_122 Gammaproteobacteria_gi_489206598 hallmark;refseq 34;24;4;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH6 extrachromosomal linear Cluster_46 Gammaproteobacteria_gi_489206652 hallmark;refseq 28;16;1;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH6 extrachromosomal linear Cluster_237 Gammaproteobacteria_gi_489208822 hallmark;refseq 49;26;2;21 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH7 extrachromosomal linear Cluster_93 Gammaproteobacteria_gi_489209124 hallmark 24;10;6;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH7 extrachromosomal linear Cluster_122 Gammaproteobacteria_gi_489212380 refseq 17;7;2;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH7 extrachromosomal linear Cluster_38 Gammaproteobacteria_gi_489216092 hallmark;refseq 21;10;5;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Tunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH7 extrachromosomal linear Cluster_317 Gammaproteobacteria_gi_489221009 refseq 24;12;1;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH7 extrachromosomal linear Cluster_237 Gammaproteobacteria_gi_489258418 hallmark;refseq 33;19;;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH10 extrachromosomal linear Cluster_93 Gammaproteobacteria_gi_489273109 hallmark;refseq 15;9;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Tunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH10 extrachromosomal linear Cluster_317 Gammaproteobacteria_gi_489285945 refseq 25;13;1;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH10 extrachromosomal linear Cluster_237 Gammaproteobacteria_gi_489313211-33930-70030 hallmark;refseq 49;27;9;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH11 prophage linear Cluster_122 Gammaproteobacteria_gi_489319072 refseq 24;12;1;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH11 extrachromosomal linear Cluster_237 Gammaproteobacteria_gi_489323864 hallmark;refseq 102;42;7;53 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH13 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_489327416 hallmark;refseq 43;21;4;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH13 extrachromosomal linear Cluster_53 Gammaproteobacteria_gi_489330692 hallmark 31;13;10;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH13 extrachromosomal linear Cluster_28 Gammaproteobacteria_gi_489330989-0-17069 refseq 32;15;3;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH13 prophage linear Cluster_38 Gammaproteobacteria_gi_489335589 refseq 22;13;4;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH13 extrachromosomal linear Cluster_189 Gammaproteobacteria_gi_489335950 hallmark;refseq 19;18;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH13 extrachromosomal linear Cluster_46 Gammaproteobacteria_gi_489336153 hallmark;refseq 20;16;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH13 extrachromosomal linear Cluster_24 Gammaproteobacteria_gi_489352331 hallmark;refseq 121;49;9;63 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH14 extrachromosomal linear Cluster_53 Gammaproteobacteria_gi_489353850 hallmark;refseq 43;21;4;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH14 extrachromosomal linear Cluster_53 Gammaproteobacteria_gi_489353914 refseq 43;18;6;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH14 extrachromosomal linear Cluster_53 Gammaproteobacteria_gi_489355828 hallmark 32;13;10;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH14 extrachromosomal linear Cluster_28 Gammaproteobacteria_gi_489356081 refseq 31;15;4;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH14 extrachromosomal linear Cluster_38 Gammaproteobacteria_gi_489358119 refseq 22;14;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH14 extrachromosomal linear Cluster_189 Gammaproteobacteria_gi_489358252 hallmark;refseq 19;18;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH14 extrachromosomal linear Cluster_46 Gammaproteobacteria_gi_489358365 hallmark;refseq 20;16;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH14 extrachromosomal linear Cluster_24 Gammaproteobacteria_gi_489367229 hallmark;refseq 102;42;7;53 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH15 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_489371609 hallmark 32;13;10;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH15 extrachromosomal linear Cluster_28 Gammaproteobacteria_gi_489372798 hallmark;refseq 19;11;4;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH15 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_489372967 hallmark;refseq 32;21;5;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH15 extrachromosomal linear Cluster_24 Gammaproteobacteria_gi_489373919 refseq 31;15;2;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH15 extrachromosomal linear Cluster_38 Gammaproteobacteria_gi_489374251 hallmark 19;7;2;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Twortlikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH15 extrachromosomal linear Cluster_53 Gammaproteobacteria_gi_489374963 refseq 24;15;3;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH15 extrachromosomal linear Cluster_189 Gammaproteobacteria_gi_489376960 hallmark;refseq 102;42;6;54 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH16 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_489378397 hallmark;refseq 43;21;4;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH16 extrachromosomal linear Cluster_53 Gammaproteobacteria_gi_489381348 hallmark 34;13;10;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH16 extrachromosomal linear Cluster_28 Gammaproteobacteria_gi_489382006 refseq 20;10;5;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH16 extrachromosomal linear Cluster_267 Gammaproteobacteria_gi_489383696 refseq 22;13;4;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH16 extrachromosomal linear Cluster_189 Gammaproteobacteria_gi_489383865 hallmark;refseq 19;18;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH16 extrachromosomal linear Cluster_46 Gammaproteobacteria_gi_489384114 hallmark;refseq 20;16;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH16 extrachromosomal linear Cluster_24 Gammaproteobacteria_gi_489393746 hallmark;refseq 100;42;6;52 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH17 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_489395374 hallmark;refseq 43;21;4;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH17 extrachromosomal linear Cluster_53 Gammaproteobacteria_gi_489397818 hallmark 32;13;10;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH17 extrachromosomal linear Cluster_28 Gammaproteobacteria_gi_489398226 refseq 19;9;5;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH17 extrachromosomal linear Cluster_267 Gammaproteobacteria_gi_489399075 refseq 28;15;1;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH17 extrachromosomal linear Cluster_521 Gammaproteobacteria_gi_489399575 hallmark;refseq 20;19;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH17 extrachromosomal linear Cluster_46 Gammaproteobacteria_gi_489399625 hallmark;refseq 20;16;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH17 extrachromosomal linear Cluster_24 Gammaproteobacteria_gi_489399710 refseq 21;13;2;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH17 extrachromosomal linear Cluster_189 Gammaproteobacteria_gi_489406804 hallmark;noncaudo 10;3;;7 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH18 extrachromosomal circular Cluster_232 Gammaproteobacteria_gi_489410444 hallmark;refseq 107;46;7;54 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH20 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_489413238 hallmark 31;13;10;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH20 extrachromosomal linear Cluster_28 Gammaproteobacteria_gi_489414281 refseq 35;15;5;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH22 extrachromosomal linear Cluster_38 Gammaproteobacteria_gi_489414335 hallmark 32;13;10;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH22 extrachromosomal linear Cluster_28 Gammaproteobacteria_gi_489415741 hallmark;refseq 19;18;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH22 extrachromosomal linear Cluster_46 Gammaproteobacteria_gi_489415795 refseq 10;6;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH22 extrachromosomal linear Cluster_275 Gammaproteobacteria_gi_489415949 hallmark;refseq 20;16;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH22 extrachromosomal linear Cluster_24 Gammaproteobacteria_gi_489416412 refseq 10;6;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH22 extrachromosomal linear Cluster_109 Gammaproteobacteria_gi_489416446 refseq 22;13;3;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH22 extrachromosomal linear Cluster_189 Gammaproteobacteria_gi_489427235 refseq 35;15;5;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH23 extrachromosomal linear Cluster_38 Gammaproteobacteria_gi_489427437 hallmark 32;13;10;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH23 extrachromosomal linear Cluster_28 Gammaproteobacteria_gi_489430139 refseq 10;6;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH23 extrachromosomal linear Cluster_275 Gammaproteobacteria_gi_489430240 hallmark;refseq 20;19;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH23 extrachromosomal linear Cluster_46 Gammaproteobacteria_gi_489430319 hallmark;refseq 20;16;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH23 extrachromosomal linear Cluster_24 Gammaproteobacteria_gi_489430855 refseq 10;6;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH23 extrachromosomal linear Cluster_109 Gammaproteobacteria_gi_489430923 refseq 21;12;3;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH23 extrachromosomal linear Cluster_189 Gammaproteobacteria_gi_489445320 refseq 65;25;3;37 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH24 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_489445829 hallmark;refseq 40;20;4;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH24 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_489450134 hallmark 18;6;7;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH24 extrachromosomal linear Cluster_28 Gammaproteobacteria_gi_489450980 refseq 10;6;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH24 extrachromosomal linear Cluster_275 Gammaproteobacteria_gi_489451051 hallmark;refseq 20;19;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH24 extrachromosomal linear Cluster_46 Gammaproteobacteria_gi_489451269 hallmark;refseq 20;16;1;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH24 extrachromosomal linear Cluster_24 Gammaproteobacteria_gi_489451792 refseq 22;12;3;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH24 extrachromosomal linear Cluster_189 Gammaproteobacteria_gi_489478687-0-21970 hallmark;refseq 34;21;2;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH25 prophage linear Cluster_346 Gammaproteobacteria_gi_489480542 hallmark;noncaudo 9;3;;6 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH25 extrachromosomal linear Cluster_232 Gammaproteobacteria_gi_489550425-171719-182638 refseq 15;9;1;5 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa PA45 prophage linear Cluster_13 Gammaproteobacteria_gi_489665639-105877-142470 hallmark;refseq;vdb 53;26;9;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MP020980.1 prophage linear Cluster_72 Gammaproteobacteria_gi_489666782-175257-185355 hallmark;refseq 12;10;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MP020980.1 prophage linear Cluster_0 Gammaproteobacteria_gi_489667057 hallmark;refseq 23;17;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MP020980.1 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_489667428 hallmark;refseq 66;50;9;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MP020980.1 extrachromosomal circular Cluster_3 Gammaproteobacteria_gi_489667910 hallmark;refseq 18;13;5; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MP020980.1 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_489668716 hallmark;refseq 37;22;11;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MP020980.1 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_489678641-30282-41396 hallmark;refseq 14;12;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli MP020980.1 prophage linear Cluster_22 Gammaproteobacteria_gi_489686661-0-16959 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304777.10 prophage linear Cluster_2 Gammaproteobacteria_gi_489688868 hallmark;refseq 30;26;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304777.10 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_489693838-28850-39033 hallmark;refseq 10;8;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304777.10 prophage linear Cluster_0 Gammaproteobacteria_gi_489694046-0-27049 hallmark;refseq 35;30;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304777.10 prophage linear Cluster_0 Gammaproteobacteria_gi_489740706 hallmark;refseq 34;29;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304777.14 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_489741976 hallmark;refseq 43;21;17;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304777.14 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_489742046-6117-24443 hallmark;refseq 20;17;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304777.14 prophage linear Cluster_2 Gammaproteobacteria_gi_489744014-21-21558 hallmark;refseq 28;22;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304777.14 prophage linear Cluster_0 Gammaproteobacteria_gi_489753141-7063-22780 hallmark;refseq 19;17;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304777.4 prophage linear Cluster_0 Gammaproteobacteria_gi_489814148 hallmark;refseq 18;15;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304777.5 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_489856476 hallmark;refseq 26;18;7;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304777.5 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_489902524-27042-61428 hallmark;refseq 44;38;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304777.7 prophage linear Cluster_0 Gammaproteobacteria_gi_489918472-0-16046 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304777.7 prophage linear Cluster_2 Gammaproteobacteria_gi_489920269 hallmark;refseq 24;16;5;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304777.7 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_489963047 hallmark;refseq 33;28;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304777.8 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_489963152 hallmark;refseq 24;19;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304777.8 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_489971227-400-14066 hallmark;refseq 15;13;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304777.9 prophage linear Cluster_2 Gammaproteobacteria_gi_489973699-6381-28725 hallmark;refseq 29;21;6;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304816.12 prophage linear Cluster_1 Gammaproteobacteria_gi_489975193-39127-83979 hallmark;refseq 68;59;4;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304816.12 prophage linear Cluster_81 Gammaproteobacteria_gi_489975435 refseq 24;18;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304816.12 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_489978940 hallmark;refseq 26;20;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304816.12 extrachromosomal linear Cluster_26 Gammaproteobacteria_gi_490000526 hallmark;refseq 21;17;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304816.14 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_490000759-182327-227179 hallmark;refseq 69;59;5;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304816.14 prophage linear Cluster_81 Gammaproteobacteria_gi_490000944-6291-28635 hallmark;refseq 29;21;6;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304816.14 prophage linear Cluster_1 Gammaproteobacteria_gi_490007434 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304816.2 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_490007856-155986-200838 hallmark;refseq 69;59;5;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304816.2 prophage linear Cluster_81 Gammaproteobacteria_gi_490008970-27-31108 hallmark;refseq 38;32;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304816.2 prophage linear Cluster_2 Gammaproteobacteria_gi_490012392 hallmark;refseq 41;31;6;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304816.4 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_490012420-8929-25416 hallmark;refseq 21;18;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304816.4 prophage linear Cluster_1 Gammaproteobacteria_gi_490012509-140599-185451 hallmark;refseq 66;58;4;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304816.4 prophage linear Cluster_81 Gammaproteobacteria_gi_490012567-6525-28869 hallmark;refseq 29;21;6;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304816.4 prophage linear Cluster_1 Gammaproteobacteria_gi_490015080 hallmark;refseq 24;18;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304816.6 extrachromosomal linear Cluster_26 Gammaproteobacteria_gi_490017310 hallmark;refseq 18;15;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304816.6 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_490017610-182423-227275 hallmark;refseq 68;58;4;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304816.6 prophage linear Cluster_81 Gammaproteobacteria_gi_490017889 hallmark;refseq 40;22;13;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304816.6 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_490019714-0-16167 refseq 22;17;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304816.6 prophage linear Cluster_3 Gammaproteobacteria_gi_490021906-11106-37616 hallmark;refseq 31;24;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304816.6 prophage linear Cluster_1 Gammaproteobacteria_gi_490042309 hallmark;refseq 22;17;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304816.8 extrachromosomal linear Cluster_26 Gammaproteobacteria_gi_490051813 hallmark;refseq 102;92;2;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli C-34666 extrachromosomal circular Cluster_16 Gammaproteobacteria_gi_490052016 hallmark;refseq 37;32;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli C-34666 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_490061936 hallmark;refseq 30;20;7;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2866450 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_490062991 hallmark;refseq 47;24;11;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2866450 extrachromosomal linear Cluster_28 Gammaproteobacteria_gi_490064275-22966-51383 hallmark;refseq 37;25;2;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2866450 prophage linear Cluster_11 Gammaproteobacteria_gi_490078927 hallmark;refseq 18;13;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2865200 extrachromosomal linear Cluster_26 Gammaproteobacteria_gi_490081315 hallmark;refseq 27;25;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2861200 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_490083476 hallmark;noncaudo;vdb 6;1;;5 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2861200 extrachromosomal linear Cluster_270 Gammaproteobacteria_gi_490091285 hallmark;refseq 119;99;9;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2780750 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_490098110 hallmark;refseq 20;18;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2762100 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_490098714 refseq 16;11;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2762100 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_490108352 hallmark;refseq 17;15;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 174750 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_490110284 hallmark 31;13;11;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 174750 extrachromosomal linear Cluster_28 Gammaproteobacteria_gi_490114437 hallmark;refseq 27;21;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 174750 extrachromosomal linear Cluster_11 Gammaproteobacteria_gi_490116302-0-22029 hallmark;refseq 33;26;3;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 174750 prophage linear Cluster_0 Gammaproteobacteria_gi_490116883-13386-42869 hallmark;refseq 39;33;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 174750 prophage linear Cluster_0 Gammaproteobacteria_gi_490121498-67425-101947 hallmark;refseq 54;48;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0302308.1 prophage linear Cluster_3 Gammaproteobacteria_gi_490121822-70689-115890 hallmark;refseq 58;47;6;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0302308.1 prophage linear Cluster_1 Gammaproteobacteria_gi_490129707-67093-103204 hallmark;refseq 52;48;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli Jurua 20/10 prophage linear Cluster_3 Gammaproteobacteria_gi_490195367-54-10466 hallmark;noncaudo 16;8;;8 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2846750 prophage linear Cluster_36 Gammaproteobacteria_gi_490196526-18027-54809 hallmark;refseq 53;39;7;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2846750 prophage linear Cluster_21 Gammaproteobacteria_gi_490200992-14000-37839 hallmark;refseq 32;28;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2846750 prophage linear Cluster_0 Gammaproteobacteria_gi_490206926-2997-46550 hallmark;refseq 61;28;11;22 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2846750 prophage linear Cluster_48 Gammaproteobacteria_gi_490254773 hallmark;refseq 22;19;;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Stenotrophomonas Stenotrophomonas maltophilia RA8 extrachromosomal linear Cluster_311 Gammaproteobacteria_gi_490283097-24778-43540 hallmark;refseq 19;18;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HM65 prophage linear Cluster_0 Gammaproteobacteria_gi_490283220 hallmark;refseq 47;39;2;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HM65 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_490283495 hallmark;refseq 37;29;4;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HM65 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_490283763 refseq 14;10;4; Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HM65 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_490284323 hallmark;refseq 20;18;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HM65 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_490286349-135386-164974 hallmark;refseq 39;31;4;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HM26 prophage linear Cluster_0 Gammaproteobacteria_gi_490286387-601-30133 hallmark;refseq 42;27;13;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HM26 prophage linear Cluster_1 Gammaproteobacteria_gi_490293293-45408-76692 hallmark;refseq 38;33;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HM69 prophage linear Cluster_0 Gammaproteobacteria_gi_490296903 refseq 24;19;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HM69 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_490297031 hallmark;refseq 28;21;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HM69 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_490302994-15189-50621 hallmark;refseq 50;48;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HM27 prophage linear Cluster_3 Gammaproteobacteria_gi_490303348-0-24494 hallmark;refseq 34;26;7;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HM27 prophage linear Cluster_0 Gammaproteobacteria_gi_490305109 hallmark;refseq 34;23;9;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HM27 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_490308560 hallmark;refseq 9;7;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HM27 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_490362997 hallmark;refseq 14;11;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KpMDU1 extrachromosomal linear Cluster_25 Gammaproteobacteria_gi_490363435-0-20971 hallmark;refseq 35;26;3;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KpMDU1 prophage linear Cluster_25 Gammaproteobacteria_gi_490364168 hallmark;refseq 51;39;3;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KpMDU1 extrachromosomal linear Cluster_7 Gammaproteobacteria_gi_490364340 hallmark;refseq 30;19;3;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KpMDU1 extrachromosomal linear Cluster_410 Gammaproteobacteria_gi_490364629-14231-33246 hallmark;refseq 30;23;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KpMDU1 prophage linear Cluster_37 Gammaproteobacteria_gi_490364742 refseq 14;11;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae KpMDU1 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_490682173 hallmark 17;8;2;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas putida str. Idaho extrachromosomal linear Cluster_47 Gammaproteobacteria_gi_490683720 hallmark;refseq 34;17;7;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas putida str. Idaho extrachromosomal linear Cluster_83 Gammaproteobacteria_gi_490684834 hallmark;refseq 33;15;3;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas putida str. Idaho extrachromosomal linear Cluster_83 Gammaproteobacteria_gi_490686954 hallmark;refseq 22;13;5;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas putida str. Idaho extrachromosomal linear Cluster_26 Gammaproteobacteria_gi_490687799 hallmark;refseq 15;13;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas putida str. Idaho extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_490707719-16806-52905 hallmark;refseq 50;27;9;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH19 prophage linear Cluster_122 Gammaproteobacteria_gi_490708119 hallmark;refseq 30;16;2;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH19 extrachromosomal linear Cluster_237 Gammaproteobacteria_gi_490708151 hallmark;refseq 16;15;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH19 extrachromosomal linear Cluster_46 Gammaproteobacteria_gi_490708858 refseq 11;7;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH20 extrachromosomal linear Cluster_275 Gammaproteobacteria_gi_490708860 hallmark;refseq 20;19;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH20 extrachromosomal linear Cluster_46 Gammaproteobacteria_gi_490708866 hallmark;refseq 20;16;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH20 extrachromosomal linear Cluster_24 Gammaproteobacteria_gi_490708869 refseq 21;13;;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ABNIH20 extrachromosomal linear Cluster_521 Gammaproteobacteria_gi_490711007-190-47552 hallmark;refseq 73;37;5;31 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas putida TRO1 prophage linear Cluster_26 Gammaproteobacteria_gi_490720375 hallmark 70;20;5;45 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Alteromonadales;Alteromonadaceae;Marinobacter Marinobacter nanhaiticus D15-8W extrachromosomal circular Cluster_547 Gammaproteobacteria_gi_490726440 hallmark 13;6;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Alteromonadales;Pseudoalteromonadaceae;Pseudoalteromonas Pseudoalteromonas agarivorans S816 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_490727190 hallmark 15;7;6;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Alteromonadales;Pseudoalteromonadaceae;Pseudoalteromonas Pseudoalteromonas agarivorans S816 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_490795760-1102621-1144597 hallmark;refseq 41;27;1;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter sp. NIPH 809 prophage linear Cluster_299 Gammaproteobacteria_gi_490821714-14579-21811 noncaudo 11;2;2;7 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter parvus DSM 16617 = CIP 108168 prophage linear Cluster_417 Gammaproteobacteria_gi_490854578 hallmark;refseq 68;24;5;39 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;N4likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii NIPH 1362 extrachromosomal linear Cluster_523 Gammaproteobacteria_gi_490861250-685007-697948 hallmark;noncaudo 17;4;1;12 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter guillouiae CIP 63.46 prophage linear Cluster_165 Gammaproteobacteria_gi_490878602 hallmark 108;25;3;80 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii NIPH 615 extrachromosomal circular Cluster_506 Gammaproteobacteria_gi_490881971-1682317-1732054 hallmark;refseq 70;47;3;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii NIPH 2061 prophage linear Cluster_24 Gammaproteobacteria_gi_490893321 hallmark;refseq 45;29;8;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter sp. ANC 3789 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_490916701 noncaudo 10;2;2;6 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter sp. CIP 102082 extrachromosomal linear Cluster_417 Gammaproteobacteria_gi_490919085 hallmark 94;29;3;62 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter sp. NIPH 899 extrachromosomal circular Cluster_66 Gammaproteobacteria_gi_490926086 hallmark;refseq 43;22;1;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter sp. NIPH 899 extrachromosomal linear Cluster_307 Gammaproteobacteria_gi_490949770 hallmark 96;26;4;66 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter schindleri NIPH 900 extrachromosomal circular Cluster_66 Gammaproteobacteria_gi_490972898-504401-534040 hallmark;refseq 35;21;3;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii NIPH 190 prophage linear Cluster_19 Gammaproteobacteria_gi_490981638 hallmark 95;23;1;71 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii NIPH 60 extrachromosomal linear Cluster_506 Gammaproteobacteria_gi_491042914 hallmark 54;19;6;29 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter brisouii ANC 4119 extrachromosomal circular Cluster_369 Gammaproteobacteria_gi_491155563 hallmark 81;10;14;57 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Punalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter radioresistens NIPH 2130 extrachromosomal circular Cluster_66 Gammaproteobacteria_gi_491255701 hallmark;refseq 119;42;20;57 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii NIPH 201 extrachromosomal circular Cluster_53 Gammaproteobacteria_gi_491262616-0-40089 hallmark;refseq 57;38;5;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii NIPH 335 prophage linear Cluster_24 Gammaproteobacteria_gi_491269195 hallmark;refseq 66;30;6;30 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii NIPH 329 extrachromosomal circular Cluster_24 Gammaproteobacteria_gi_491269334 hallmark;refseq 112;44;15;53 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii NIPH 329 extrachromosomal linear Cluster_53 Gammaproteobacteria_gi_491276315 hallmark;refseq 117;41;18;58 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii NIPH 70 extrachromosomal linear Cluster_53 Gammaproteobacteria_gi_491278475 noncaudo 7;2;2;3 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii NIPH 290 extrachromosomal circular Cluster_165 Gammaproteobacteria_gi_491285124 hallmark;refseq 71;30;16;25 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ATCC 19606 = CIP 70.34 extrachromosomal linear Cluster_299 Gammaproteobacteria_gi_491286131-396353-445164 hallmark;refseq 76;38;6;32 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ATCC 19606 = CIP 70.34 prophage linear Cluster_24 Gammaproteobacteria_gi_491320318-878524-893378 noncaudo;vdb 24;4;1;19 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter sp. CIP 53.82 prophage linear Cluster_165 Gammaproteobacteria_gi_49146358 hallmark;vdb 57;7;14;36 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Thiotrichales;unknown;unknown Caedibacter taeniospiralis extrachromosomal linear Cluster_167 Gammaproteobacteria_gi_492137484-12599-23103 hallmark;refseq 10;7;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2762100 prophage linear Cluster_0 Gammaproteobacteria_gi_492137918-0-21963 hallmark;refseq 29;25;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2762100 prophage linear Cluster_0 Gammaproteobacteria_gi_492138986-152-42819 hallmark;refseq 59;49;7;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2762100 prophage linear Cluster_11 Gammaproteobacteria_gi_492145550 hallmark;refseq 14;11;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2762100 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_492624286 hallmark;refseq 17;16;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Aeromonadales;Aeromonadaceae;Aeromonas Aeromonas molluscorum 848 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_492624970 hallmark 20;10;1;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Aeromonadales;Aeromonadaceae;Aeromonas Aeromonas molluscorum 848 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_492627534 hallmark;refseq 14;9;;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Aeromonadales;Aeromonadaceae;Aeromonas Aeromonas molluscorum 848 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_493550124 hallmark 16;6;5;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. 56.O.08 extrachromosomal linear Cluster_584 Gammaproteobacteria_gi_493596154 hallmark;refseq 38;23;10;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. 51.E.09 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_493604524 hallmark;refseq 26;17;7;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. 50.E.08 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_493608133 hallmark;refseq 38;23;10;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. 48.E.08 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_493611432-0-10368 hallmark;refseq;vdb 11;9;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. 46.E.09 prophage linear Cluster_22 Gammaproteobacteria_gi_493617746 hallmark;refseq 38;23;10;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. 46.E.09 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_493625922-0-10335 hallmark;refseq;vdb 11;9;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. 45.E.09 prophage linear Cluster_22 Gammaproteobacteria_gi_493629124 hallmark;refseq 37;22;11;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. 45.E.09 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_493630770-2415-10352 hallmark;refseq;vdb 7;5;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. 44.E.09 prophage linear Cluster_22 Gammaproteobacteria_gi_493652953 hallmark;refseq 38;23;10;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. 43.E.09 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_493656930-0-10338 hallmark;refseq;vdb 11;9;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. 42.E.09 prophage linear Cluster_22 Gammaproteobacteria_gi_493658301 hallmark;refseq 39;29;7;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. 42.E.09 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_493665954 hallmark;refseq 12;6;6; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. 42.E.09 extrachromosomal linear Cluster_22 Gammaproteobacteria_gi_493666186 hallmark;refseq 38;23;10;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. 42.E.09 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_493684585-0-10500 hallmark;refseq;vdb 11;9;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. 41.E.09 prophage linear Cluster_22 Gammaproteobacteria_gi_493690298 hallmark;refseq 39;29;7;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. 41.E.09 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_493694029 hallmark;refseq 38;23;10;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. 41.E.09 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_493705566 hallmark;refseq 16;13;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. 38.O.03 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_493705707 hallmark;refseq 24;23;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. 38.O.03 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_493720075-0-39971 hallmark;refseq 52;42;8;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. 36.H.00 prophage linear Cluster_1 Gammaproteobacteria_gi_493728969-76755-108508 hallmark;refseq 44;40;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. 35.H.08 prophage linear Cluster_0 Gammaproteobacteria_gi_493777363-0-22052 hallmark;refseq 28;17;8;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. 29.O.08 prophage linear Cluster_0 Gammaproteobacteria_gi_493778021-0-10482 hallmark;refseq;vdb 11;9;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. 29.O.08 prophage linear Cluster_22 Gammaproteobacteria_gi_493788391-0-22052 hallmark;refseq 28;17;8;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. 28.O.08 prophage linear Cluster_0 Gammaproteobacteria_gi_493796683-0-22079 hallmark;refseq 28;17;8;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. 27.O.98 prophage linear Cluster_0 Gammaproteobacteria_gi_493806918 hallmark;refseq 29;18;8;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. 24.H.04 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_493807147 hallmark;refseq 55;51;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. 24.H.04 extrachromosomal linear Cluster_23 Gammaproteobacteria_gi_493814686-83290-125245 hallmark;refseq 53;44;7;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. 23.F.01 prophage linear Cluster_1 Gammaproteobacteria_gi_493815155-0-21746 hallmark;refseq 28;17;8;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. 23.F.01 prophage linear Cluster_0 Gammaproteobacteria_gi_493823079-3651-15326 hallmark;refseq 13;10;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. 22.H.04 prophage linear Cluster_0 Gammaproteobacteria_gi_493830709-76869-98371 hallmark;refseq 31;26;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. 21.H.10 prophage linear Cluster_0 Gammaproteobacteria_gi_493833832-43952-65953 hallmark;refseq 28;17;8;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. 21.H.10 prophage linear Cluster_0 Gammaproteobacteria_gi_493854476-38713-51014 hallmark;refseq 10;8;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. 19.F.03 prophage linear Cluster_0 Gammaproteobacteria_gi_493867527 hallmark;refseq 44;41;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. 18.H.07 extrachromosomal linear Cluster_11 Gammaproteobacteria_gi_493873031 hallmark;refseq 44;41;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. 17.H.06 extrachromosomal linear Cluster_11 Gammaproteobacteria_gi_493874984-49536-64517 hallmark;refseq 17;14;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. 15.H.03 prophage linear Cluster_22 Gammaproteobacteria_gi_493875682-76692-96174 hallmark;refseq 29;26;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. 15.H.03 prophage linear Cluster_0 Gammaproteobacteria_gi_493879532 hallmark;refseq 11;7;;4 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. 15.H.03 extrachromosomal linear Cluster_36 Gammaproteobacteria_gi_493885568 hallmark;refseq 59;54;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. 14.E.05 extrachromosomal linear Cluster_11 Gammaproteobacteria_gi_493887096-36097-75167 hallmark;refseq 59;55;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. 13.E.05 prophage linear Cluster_11 Gammaproteobacteria_gi_493887456 hallmark;refseq 33;27;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. 13.E.05 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_493907435 hallmark;refseq 33;27;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. 09.F.08 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_493950712-15574-30601 hallmark;refseq 18;15;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. 57.A.08 prophage linear Cluster_22 Gammaproteobacteria_gi_493950966 hallmark;refseq 18;17;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. 57.A.08 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_493958020 hallmark;refseq 38;23;10;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. 49.E.09 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_493959289-49216-70093 hallmark;refseq 24;15;7;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. 39.O.03 prophage linear Cluster_22 Gammaproteobacteria_gi_493964718-0-22054 hallmark;refseq 28;17;8;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. 30.H.04 prophage linear Cluster_0 Gammaproteobacteria_gi_493969621-44187-65953 hallmark;refseq 28;17;8;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. 26.F.98 prophage linear Cluster_0 Gammaproteobacteria_gi_498483687-2505058-2527818 hallmark;refseq 30;19;5;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Dickeya Dickeya dianthicola NCPPB 453 prophage linear Cluster_0 Gammaproteobacteria_gi_498483687-604406-642522 hallmark;refseq 47;36;4;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Dickeya Dickeya dianthicola NCPPB 453 prophage linear Cluster_0 Gammaproteobacteria_gi_498483688 hallmark;refseq 53;23;10;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Dickeya Dickeya dianthicola NCPPB 3534 extrachromosomal linear Cluster_72 Gammaproteobacteria_gi_498483797-2481559-2504891 hallmark;refseq 29;20;5;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Dickeya Dickeya dianthicola NCPPB 3534 prophage linear Cluster_0 Gammaproteobacteria_gi_498483802 hallmark;refseq 15;13;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Dickeya Dickeya dianthicola GBBC 2039 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_498483834-2756203-2779668 hallmark;refseq 31;20;4;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Dickeya Dickeya solani MK10 prophage linear Cluster_0 Gammaproteobacteria_gi_498483838-2687298-2710763 hallmark;refseq 31;20;4;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Dickeya Dickeya solani MK16 prophage linear Cluster_0 Gammaproteobacteria_gi_498484550 hallmark 44;14;16;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Haemophilus Haemophilus parasuis gx033 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_498485000-0-16480 hallmark;refseq 28;15;8;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Haemophilus Haemophilus parasuis gx033 prophage linear Cluster_0 Gammaproteobacteria_gi_498490255 hallmark;refseq 18;15;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304777.2 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_498490259-3926-20553 hallmark;refseq 20;16;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304777.2 prophage linear Cluster_2 Gammaproteobacteria_gi_498490291 hallmark;refseq 34;27;3;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304777.2 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_498490570 hallmark;refseq 26;18;7;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304777.2 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_498490639-4-15404 hallmark;refseq 19;17;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304777.2 prophage linear Cluster_1 Gammaproteobacteria_gi_498490695-6670-20152 hallmark;refseq 16;14;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P0304777.2 prophage linear Cluster_0 Gammaproteobacteria_gi_498508373-4611-9805 hallmark;refseq 9;8;;1 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio parahaemolyticus v110 prophage linear Cluster_14 Gammaproteobacteria_gi_498583135 hallmark;refseq 41;35;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. 73.H.09 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_498623099 hallmark;refseq 42;34;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. 71.E.05 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_498629617 hallmark;refseq 41;21;16;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. 70.E.05 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_498631823 hallmark;refseq 11;7;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. 70.E.05 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_498634664-21000-42301 hallmark;refseq 29;25;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. 70.E.05 prophage linear Cluster_0 Gammaproteobacteria_gi_498657415 hallmark;refseq 32;27;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. 69.H.06 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_498660747-0-22052 hallmark;refseq 28;17;8;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. 68.U.05 prophage linear Cluster_0 Gammaproteobacteria_gi_498667832-0-47321 hallmark;refseq 75;67;4;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. 66.F.99 prophage linear Cluster_23 Gammaproteobacteria_gi_498711479 hallmark;refseq 38;33;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. 64.H.00 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_498720328-0-16018 hallmark;refseq 18;15;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. 63.H.87 prophage linear Cluster_22 Gammaproteobacteria_gi_498720545 hallmark;refseq 43;36;3;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. 63.H.87 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_498722277 hallmark 15;5;5;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. 63.H.87 extrachromosomal linear Cluster_584 Gammaproteobacteria_gi_498730017-21733-51358 hallmark;refseq 39;33;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. 62.H.72 prophage linear Cluster_0 Gammaproteobacteria_gi_498731432-51779-67291 hallmark;refseq 18;15;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. 62.H.72 prophage linear Cluster_22 Gammaproteobacteria_gi_498733216 hallmark;refseq 21;19;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. 62.H.72 extrachromosomal linear Cluster_11 Gammaproteobacteria_gi_498760627-93751-105426 hallmark;refseq 13;10;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. 67.H.09 prophage linear Cluster_0 Gammaproteobacteria_gi_498766313-21000-42301 hallmark;refseq 29;25;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. 67.H.09 prophage linear Cluster_0 Gammaproteobacteria_gi_499068316-423619-447469 hallmark;refseq 25;18;3;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Xenorhabdus Xenorhabdus nematophila F1 prophage linear Cluster_0 Gammaproteobacteria_gi_499133666 hallmark;refseq 21;18;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Enterobacter Enterobacter sp. MR1 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_499134761-0-12786 hallmark;refseq 17;17;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Enterobacter Enterobacter cloacae MR2 prophage linear Cluster_0 Gammaproteobacteria_gi_499135119 refseq 31;19;1;11 Viruses;unclassified;unclassified;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Enterobacter Enterobacter cloacae MR2 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_499135146 hallmark;refseq 17;14;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Enterobacter Enterobacter cloacae MR2 extrachromosomal linear Cluster_18 Gammaproteobacteria_gi_499136717 hallmark 25;6;4;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Aliivibrio Aliivibrio logei ATCC 35077 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_499136721 hallmark;refseq 21;9;6;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Aliivibrio Aliivibrio logei ATCC 35077 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_499136868-9221-28766 hallmark;refseq 25;20;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio gazogenes ATCC 43941 prophage linear Cluster_85 Gammaproteobacteria_gi_501174973 hallmark;refseq 100;40;9;51 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio VIbrio owensii CAIM 1854 = LMG 25443 extrachromosomal circular Cluster_16 Gammaproteobacteria_gi_501677485-4270522-4343277 hallmark;refseq 95;42;18;35 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas protegens CHA0 prophage linear Cluster_18 Gammaproteobacteria_gi_502080925-53-11260 hallmark;refseq 10;8;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157 str. NCCP15738 prophage linear Cluster_0 Gammaproteobacteria_gi_502092201-0-33424 hallmark;refseq 49;42;3;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O157 str. NCCP15738 prophage linear Cluster_3 Gammaproteobacteria_gi_505461603-96976-147052 hallmark;refseq;vdb 80;60;7;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa VRFPA02 prophage linear Cluster_64 Gammaproteobacteria_gi_505462081 hallmark;refseq 68;24;21;23 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa VRFPA02 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_505462428 refseq 21;15;;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa VRFPA02 extrachromosomal linear Cluster_100 Gammaproteobacteria_gi_505462444 refseq 19;15;;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa VRFPA02 extrachromosomal linear Cluster_21 Gammaproteobacteria_gi_505462751-44632-69999 hallmark;refseq 42;42;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa VRFPA02 prophage linear Cluster_59 Gammaproteobacteria_gi_505742164-1177247-1206952 hallmark;refseq 40;29;3;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Plesiomonas Plesiomonas shigelloides 302-73 prophage linear Cluster_0 Gammaproteobacteria_gi_506551859 hallmark;noncaudo 5;3;;2 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TOP2386 extrachromosomal linear Cluster_36 Gammaproteobacteria_gi_506556785-101103-135086 hallmark;refseq 45;37;2;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TOP2652 prophage linear Cluster_7 Gammaproteobacteria_gi_506557407 hallmark;refseq 26;21;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TOP2652 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_506559702 hallmark;refseq 18;14;1;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TOP2652 extrachromosomal linear Cluster_26 Gammaproteobacteria_gi_506812896 hallmark;refseq 40;32;2;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TOP2662-4 extrachromosomal circular Cluster_7 Gammaproteobacteria_gi_506815212 hallmark;refseq 20;15;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TOP2662-4 extrachromosomal linear Cluster_26 Gammaproteobacteria_gi_506815621 hallmark;refseq 21;17;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TOP2662-4 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_506819832 hallmark;refseq 41;33;2;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TOP2662-3 extrachromosomal linear Cluster_7 Gammaproteobacteria_gi_506821152 hallmark;refseq 20;15;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TOP2662-3 extrachromosomal linear Cluster_26 Gammaproteobacteria_gi_506821236 hallmark;refseq 21;17;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TOP2662-3 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_506828397 hallmark;refseq 40;32;2;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TOP2662-2 extrachromosomal linear Cluster_7 Gammaproteobacteria_gi_506829090 hallmark;refseq 20;15;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TOP2662-2 extrachromosomal linear Cluster_26 Gammaproteobacteria_gi_506829396 hallmark;refseq 21;17;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TOP2662-2 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_506839582 hallmark;refseq 40;32;2;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TOP2662-1 extrachromosomal linear Cluster_7 Gammaproteobacteria_gi_506839993 hallmark;refseq 20;15;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TOP2662-1 extrachromosomal linear Cluster_26 Gammaproteobacteria_gi_506840746 hallmark;refseq 23;19;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TOP2662-1 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_506848349 hallmark;refseq 31;26;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TOP2652 extrachromosomal linear Cluster_7 Gammaproteobacteria_gi_506848693 hallmark;refseq 21;17;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TOP2652 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_506848823 hallmark;refseq 20;15;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TOP2652 extrachromosomal linear Cluster_26 Gammaproteobacteria_gi_506858623 hallmark;noncaudo 8;4;;4 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TOP2522-1 extrachromosomal linear Cluster_36 Gammaproteobacteria_gi_506860722 hallmark;refseq 27;20;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TOP2522-1 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_506862063 hallmark;refseq 6;4;;2 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TOP2522-1 extrachromosomal linear Cluster_36 Gammaproteobacteria_gi_506937161 hallmark;refseq 16;11;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TOP2396-3 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_506937299-0-20476 hallmark;refseq 27;20;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TOP2396-3 prophage linear Cluster_0 Gammaproteobacteria_gi_506937570 refseq 20;16;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TOP2396-3 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_506937596 noncaudo 12;3;1;8 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TOP2396-3 extrachromosomal circular Cluster_51 Gammaproteobacteria_gi_506937813-432-14097 hallmark;refseq 14;13;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TOP2396-2 prophage linear Cluster_2 Gammaproteobacteria_gi_506937849 hallmark;refseq 25;20;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TOP2396-2 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_506937851-4171-10351 hallmark;refseq 6;5;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TOP2396-2 prophage linear Cluster_0 Gammaproteobacteria_gi_506937926 hallmark;refseq 17;14;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TOP2396-2 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_506938026 hallmark;refseq 5;4;;1 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TOP2396-1 extrachromosomal linear Cluster_36 Gammaproteobacteria_gi_506938251-4266-29004 hallmark;refseq 28;25;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TOP2386 prophage linear Cluster_1 Gammaproteobacteria_gi_506938288 hallmark;noncaudo 8;4;;4 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TOP2386 extrachromosomal linear Cluster_36 Gammaproteobacteria_gi_506938508-6190-40082 hallmark;refseq 48;32;8;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TOP550-4 prophage linear Cluster_21 Gammaproteobacteria_gi_506938511 refseq 16;12;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TOP550-4 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_506938520 hallmark;refseq;vdb 35;23;9;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TOP550-4 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_506938569 hallmark;refseq;vdb 44;29;12;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TOP550-3 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_506938600 refseq 16;12;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TOP550-3 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_506938694 hallmark;refseq;vdb 23;11;9;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TOP550-2 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_506938696 hallmark;refseq 22;17;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TOP550-2 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_506938697-4693-30485 hallmark;refseq 39;24;7;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TOP550-2 prophage linear Cluster_21 Gammaproteobacteria_gi_506938746 refseq 16;12;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TOP550-2 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_506938837-13747-32014 hallmark;refseq 23;18;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TOP550-1 prophage linear Cluster_1 Gammaproteobacteria_gi_506938914 hallmark;refseq 16;12;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TOP550-1 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_506939174 refseq 16;12;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TOP498 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_506939188 hallmark;refseq 37;23;10;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TOP498 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_506939273 refseq 16;12;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TOP293-4 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_506939308 hallmark;refseq 27;25;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TOP293-4 extrachromosomal linear Cluster_7 Gammaproteobacteria_gi_506939814-28377-54799 hallmark;refseq 38;36;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TOP293-3 prophage linear Cluster_7 Gammaproteobacteria_gi_506939868 refseq 16;11;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TOP293-3 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_506940117 refseq 17;12;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TOP293-2 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_506940197-22771-55383 hallmark;refseq 39;30;7;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TOP293-2 prophage linear Cluster_1 Gammaproteobacteria_gi_506940344-0-29577 hallmark;refseq 39;35;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TOP293-1 prophage linear Cluster_0 Gammaproteobacteria_gi_506940347-3065-18899 refseq 20;15;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TOP293-1 prophage linear Cluster_1 Gammaproteobacteria_gi_506940362-0-11994 hallmark;refseq 15;10;5; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TOP293-1 prophage linear Cluster_1 Gammaproteobacteria_gi_506940403 hallmark;refseq 17;13;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TOP293-1 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_506940407 hallmark;refseq 19;14;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TOP293-1 extrachromosomal linear Cluster_26 Gammaproteobacteria_gi_506940668 hallmark;refseq 47;32;12;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TOP291 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_506940795 hallmark;refseq;vdb 43;28;12;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TOP382-3 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_506940807 refseq 16;12;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TOP382-3 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_506940959 hallmark;refseq 37;28;8;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TOP382-2 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_507080321-2524261-2566866 hallmark;refseq 59;37;7;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Citrobacter Citrobacter sp. KTE30 prophage linear Cluster_0 Gammaproteobacteria_gi_507083312-757804-791202 hallmark;refseq 41;32;3;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Citrobacter Citrobacter sp. KTE151 prophage linear Cluster_0 Gammaproteobacteria_gi_507087088-231247-281418 hallmark;refseq 67;50;1;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Citrobacter Citrobacter sp. KTE32 prophage linear Cluster_18 Gammaproteobacteria_gi_507087223-11772-16028 hallmark;noncaudo 7;3;1;3 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Citrobacter Citrobacter sp. KTE32 prophage linear Cluster_198 Gammaproteobacteria_gi_507087228 hallmark;refseq 6;4;;2 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Citrobacter Citrobacter sp. KTE32 extrachromosomal linear Cluster_36 Gammaproteobacteria_gi_507088072-0-25387 hallmark;refseq 25;20;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE33 prophage linear Cluster_0 Gammaproteobacteria_gi_507088610-687855-730169 hallmark;refseq 56;47;3;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE33 prophage linear Cluster_3 Gammaproteobacteria_gi_507089196-59747-73054 hallmark;refseq 16;13;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE33 prophage linear Cluster_22 Gammaproteobacteria_gi_507091347-2161232-2221557 hallmark;refseq 76;41;9;26 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella sp. KTE92 prophage linear Cluster_26 Gammaproteobacteria_gi_507519518-4403312-4437141 hallmark;refseq 46;40;;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Aeromonadales;Aeromonadaceae;Aeromonas Aeromonas hydrophila ML09-119 prophage linear Cluster_0 Gammaproteobacteria_gi_510819236-24038-70254 hallmark;refseq 62;26;15;21 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Erwinia Erwinia tracheiphila PSU-1 prophage linear Cluster_72 Gammaproteobacteria_gi_510819702 hallmark;refseq 27;18;1;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Erwinia Erwinia tracheiphila PSU-1 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_510824215 hallmark;refseq 51;32;2;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC23 extrachromosomal linear Cluster_63 Gammaproteobacteria_gi_510824268 hallmark;refseq 32;24;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC23 extrachromosomal linear Cluster_25 Gammaproteobacteria_gi_510824578 hallmark;refseq 34;26;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC23 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_510897792-1124724-1153676 hallmark;refseq 43;30;10;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE1 prophage linear Cluster_1 Gammaproteobacteria_gi_510897835 hallmark;refseq 87;46;30;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE1 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_510898012-510888-556809 hallmark;refseq;vdb 58;35;17;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE7 prophage linear Cluster_2 Gammaproteobacteria_gi_510898069-121467-190784 hallmark;refseq 99;66;16;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE7 prophage linear Cluster_10 Gammaproteobacteria_gi_510898081-189914-225858 hallmark;refseq 44;34;8;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE7 prophage linear Cluster_0 Gammaproteobacteria_gi_510898142-309782-339686 hallmark;refseq 45;35;7;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE13 prophage linear Cluster_1 Gammaproteobacteria_gi_510898152 hallmark;refseq 16;15;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE13 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_510898239-1160874-1208266 hallmark;refseq 67;63;1;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE13 prophage linear Cluster_81 Gammaproteobacteria_gi_510899102 hallmark;refseq 90;81;6;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE114 extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_510899603-3686141-3724910 hallmark;refseq 51;37;9;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE114 prophage linear Cluster_4 Gammaproteobacteria_gi_510904024 hallmark;refseq 11;8;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE14 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_510904240 hallmark;refseq 90;46;38;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE14 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_510906157-204107-239170 hallmark;refseq 49;37;9;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE14 prophage linear Cluster_1 Gammaproteobacteria_gi_510906199 hallmark;refseq 17;10;7; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE14 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_510906216 hallmark;refseq 12;8;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE14 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_510911666-556741-594193 hallmark;refseq 44;33;8;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE19 prophage linear Cluster_1 Gammaproteobacteria_gi_510912629-721382-754649 hallmark;refseq 44;36;4;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE19 prophage linear Cluster_0 Gammaproteobacteria_gi_510912651-814044-844396 hallmark;refseq 46;37;6;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE20 prophage linear Cluster_1 Gammaproteobacteria_gi_510912669-0-41050 hallmark;refseq 56;40;11;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE20 prophage linear Cluster_2 Gammaproteobacteria_gi_510912703-247846-285513 hallmark;refseq 55;46;4;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE20 prophage linear Cluster_3 Gammaproteobacteria_gi_510912734-0-26222 hallmark;refseq 33;22;9;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE20 prophage linear Cluster_1 Gammaproteobacteria_gi_510912741 hallmark;refseq 53;22;13;18 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE20 extrachromosomal circular Cluster_48 Gammaproteobacteria_gi_510912758-66-10749 hallmark;refseq 14;13;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE20 prophage linear Cluster_1 Gammaproteobacteria_gi_510912897-234577-248745 hallmark;refseq 17;15;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE24 prophage linear Cluster_22 Gammaproteobacteria_gi_510912897-69413-101250 hallmark;refseq 39;33;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE24 prophage linear Cluster_0 Gammaproteobacteria_gi_510913878-110206-142986 hallmark;refseq 39;33;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE27 prophage linear Cluster_0 Gammaproteobacteria_gi_510913921-927658-967645 hallmark;refseq 54;47;2;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE31 prophage linear Cluster_3 Gammaproteobacteria_gi_510913982 hallmark;refseq 24;22;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE31 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_510914015-882721-896028 hallmark;refseq 16;13;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE31 prophage linear Cluster_22 Gammaproteobacteria_gi_510914074 hallmark;refseq 18;10;7;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE34 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_510914104-547996-581889 hallmark;refseq 49;36;6;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE34 prophage linear Cluster_1 Gammaproteobacteria_gi_510914246-234410-248578 hallmark;refseq 17;15;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE36 prophage linear Cluster_22 Gammaproteobacteria_gi_510914246-65222-94371 hallmark;refseq 37;33;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE36 prophage linear Cluster_0 Gammaproteobacteria_gi_510914267 hallmark;refseq 27;14;4;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE36 extrachromosomal linear Cluster_21 Gammaproteobacteria_gi_510914271 hallmark;refseq 20;17;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE36 extrachromosomal linear Cluster_21 Gammaproteobacteria_gi_510914502-0-27384 hallmark;refseq 19;15;1;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE36 prophage linear Cluster_1 Gammaproteobacteria_gi_510914509-0-16863 hallmark;refseq 29;15;5;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE36 prophage linear Cluster_21 Gammaproteobacteria_gi_510914600-133938-174202 hallmark;refseq 56;53;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE36 prophage linear Cluster_7 Gammaproteobacteria_gi_510914730-428818-453051 hallmark;refseq 33;26;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE37 prophage linear Cluster_1 Gammaproteobacteria_gi_510914878-0-40666 hallmark;refseq 57;31;20;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE37 prophage linear Cluster_1 Gammaproteobacteria_gi_510914972-363988-451409 hallmark;refseq 99;60;20;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE37 prophage linear Cluster_0 Gammaproteobacteria_gi_510914972-894299-932937 hallmark;refseq 50;44;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE37 prophage linear Cluster_7 Gammaproteobacteria_gi_510915107-0-40971 hallmark;refseq 53;28;20;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE38 prophage linear Cluster_1 Gammaproteobacteria_gi_510915123-365409-452838 hallmark;refseq 100;61;20;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE38 prophage linear Cluster_0 Gammaproteobacteria_gi_510915123-896191-934829 hallmark;refseq 50;44;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE38 prophage linear Cluster_7 Gammaproteobacteria_gi_510915356-2273151-2335995 hallmark;refseq 79;57;10;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE40 prophage linear Cluster_19 Gammaproteobacteria_gi_510916008-767725-817349 hallmark;refseq;vdb 66;37;18;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE41 prophage linear Cluster_3 Gammaproteobacteria_gi_510916074-69742-102504 hallmark;refseq 42;37;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE182 prophage linear Cluster_0 Gammaproteobacteria_gi_510916077 hallmark;refseq 26;22;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE182 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_510916172 hallmark;refseq 65;38;19;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE182 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_510916263-2935304-2978125 hallmark;refseq 57;47;6;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE185 prophage linear Cluster_7 Gammaproteobacteria_gi_510916862-0-48670 hallmark;refseq 30;24;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE186 prophage linear Cluster_5 Gammaproteobacteria_gi_510916991-0-30644 hallmark;refseq 44;26;9;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE186 prophage linear Cluster_5 Gammaproteobacteria_gi_510917062-0-29191 hallmark;refseq 47;42;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE186 prophage linear Cluster_4 Gammaproteobacteria_gi_510917590-611292-652917 hallmark;refseq 59;51;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE198 prophage linear Cluster_7 Gammaproteobacteria_gi_510917659 hallmark;refseq 69;32;15;22 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE198 extrachromosomal circular Cluster_48 Gammaproteobacteria_gi_510917781-2207902-2250633 hallmark;refseq 61;51;6;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE200 prophage linear Cluster_7 Gammaproteobacteria_gi_510917781-653919-735048 hallmark;refseq;vdb 100;59;30;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE200 prophage linear Cluster_1 Gammaproteobacteria_gi_510917846-2895978-2929259 hallmark;refseq 41;34;3;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE219 prophage linear Cluster_0 Gammaproteobacteria_gi_510917909 hallmark;refseq 105;94;2;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE221 extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_510917965-325997-370564 hallmark;refseq 54;43;11; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE222 prophage linear Cluster_1 Gammaproteobacteria_gi_510918110-3769275-3801426 hallmark;refseq 42;35;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE225 prophage linear Cluster_0 Gammaproteobacteria_gi_510918428-1548621-1592864 hallmark;refseq 58;32;17;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE240 prophage linear Cluster_1 Gammaproteobacteria_gi_510919612-24399-56863 hallmark;refseq 28;18;6;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE68 prophage linear Cluster_1 Gammaproteobacteria_gi_510919743 refseq 11;10;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Punalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE68 extrachromosomal linear Cluster_19 Gammaproteobacteria_gi_510919832-70992-112103 hallmark;refseq 46;33;5;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE69 prophage linear Cluster_2 Gammaproteobacteria_gi_510919861-353093-373906 hallmark;refseq 29;24;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE69 prophage linear Cluster_1 Gammaproteobacteria_gi_510919894-8971-48079 hallmark;refseq 55;27;12;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE69 prophage linear Cluster_48 Gammaproteobacteria_gi_510920141 hallmark;refseq 23;14;9; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE70 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_510920189-94483-128969 hallmark;refseq 52;41;6;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE71 prophage linear Cluster_4 Gammaproteobacteria_gi_510920327-37312-106446 hallmark;refseq 85;77;4;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE71 prophage linear Cluster_5 Gammaproteobacteria_gi_510921005-1228836-1270172 hallmark;refseq;vdb 62;38;14;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE73 prophage linear Cluster_3 Gammaproteobacteria_gi_510921210-221000-251908 hallmark;refseq 37;31;6; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE73 prophage linear Cluster_0 Gammaproteobacteria_gi_510921570-658237-682498 hallmark;refseq 35;30;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE74 prophage linear Cluster_1 Gammaproteobacteria_gi_510921632-356808-396316 hallmark;refseq 55;40;11;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE89 prophage linear Cluster_1 Gammaproteobacteria_gi_510921642 hallmark;refseq 18;16;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE89 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_510921654-180464-201856 hallmark;refseq 26;17;8;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE89 prophage linear Cluster_1 Gammaproteobacteria_gi_510921727-1736-37710 hallmark;refseq 53;47;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE96 prophage linear Cluster_11 Gammaproteobacteria_gi_510921749-1736-37710 hallmark;refseq 53;47;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE96 prophage linear Cluster_11 Gammaproteobacteria_gi_510921861-13-35987 hallmark;refseq 55;49;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE96 prophage linear Cluster_11 Gammaproteobacteria_gi_510921861-3074890-3110864 hallmark;refseq 55;49;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE96 prophage linear Cluster_11 Gammaproteobacteria_gi_510921961-27718-41895 hallmark;refseq 17;15;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE98 prophage linear Cluster_22 Gammaproteobacteria_gi_510922400-111271-144309 hallmark;refseq 42;36;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE98 prophage linear Cluster_0 Gammaproteobacteria_gi_510922579-0-30999 hallmark;refseq 45;22;14;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE98 prophage linear Cluster_1 Gammaproteobacteria_gi_510923085-2120254-2161924 hallmark;refseq 67;42;13;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE100 prophage linear Cluster_28 Gammaproteobacteria_gi_510923085-3121251-3150996 hallmark;refseq 41;35;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE100 prophage linear Cluster_0 Gammaproteobacteria_gi_510923085-451284-482411 hallmark;refseq 46;32;7;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE100 prophage linear Cluster_3 Gammaproteobacteria_gi_510924375-2741845-2762262 hallmark;refseq 26;20;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE102 prophage linear Cluster_26 Gammaproteobacteria_gi_510924375-4129803-4162890 hallmark;refseq 52;47;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE102 prophage linear Cluster_3 Gammaproteobacteria_gi_510924632-2077420-2106386 hallmark;refseq 31;23;2;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE103 prophage linear Cluster_26 Gammaproteobacteria_gi_510924800-0-10993 hallmark;refseq 17;14;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE103 prophage linear Cluster_0 Gammaproteobacteria_gi_510924800-504241-544140 hallmark;refseq 54;46;4;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE103 prophage linear Cluster_7 Gammaproteobacteria_gi_510925497-1272375-1322513 hallmark;refseq 68;44;16;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE107 prophage linear Cluster_3 Gammaproteobacteria_gi_510925497-2356779-2399096 hallmark;refseq 66;56;7;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE107 prophage linear Cluster_11 Gammaproteobacteria_gi_510925838 hallmark;refseq 113;45;34;34 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE108 extrachromosomal linear Cluster_19 Gammaproteobacteria_gi_510926785-3022545-3073049 hallmark;refseq 77;59;4;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE108 prophage linear Cluster_18 Gammaproteobacteria_gi_510926785-810765-849415 hallmark;refseq 53;35;11;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE108 prophage linear Cluster_3 Gammaproteobacteria_gi_510927116-44449-69386 hallmark;refseq 39;31;7;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE126 prophage linear Cluster_4 Gammaproteobacteria_gi_510927120 hallmark;refseq 16;13;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE126 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_510927129-1444941-1482784 hallmark;refseq 42;33;3;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE127 prophage linear Cluster_1 Gammaproteobacteria_gi_510927129-160967-194134 hallmark;refseq 41;35;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE127 prophage linear Cluster_0 Gammaproteobacteria_gi_510927139-673712-749736 hallmark;refseq 100;58;33;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE127 prophage linear Cluster_1 Gammaproteobacteria_gi_510927367-359150-398109 hallmark;refseq 49;40;7;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE130 prophage linear Cluster_1 Gammaproteobacteria_gi_510927388-0-42822 hallmark;refseq 34;22;5;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE130 prophage linear Cluster_1 Gammaproteobacteria_gi_510927447-435179-482605 hallmark;refseq 60;47;6;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE130 prophage linear Cluster_7 Gammaproteobacteria_gi_510927493-1345444-1366024 hallmark;refseq 33;24;5;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE132 prophage linear Cluster_1 Gammaproteobacteria_gi_510927493-1372702-1402970 hallmark;refseq 33;18;8;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE132 prophage linear Cluster_1 Gammaproteobacteria_gi_510927536-0-37592 hallmark;refseq 23;15;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE132 prophage linear Cluster_10 Gammaproteobacteria_gi_510927553-438294-501464 hallmark;refseq 67;50;4;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE132 prophage linear Cluster_7 Gammaproteobacteria_gi_510927571-0-20039 hallmark;refseq 28;22;1;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE134 prophage linear Cluster_1 Gammaproteobacteria_gi_510927632-672393-709821 hallmark;refseq 32;23;5;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE155 prophage linear Cluster_0 Gammaproteobacteria_gi_510928717-1465836-1513734 hallmark;refseq 55;32;15;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE159 prophage linear Cluster_26 Gammaproteobacteria_gi_510928816-75647-105071 hallmark;refseq 39;36;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE159 prophage linear Cluster_0 Gammaproteobacteria_gi_510928998-368279-410651 hallmark;refseq 62;52;4;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE159 prophage linear Cluster_3 Gammaproteobacteria_gi_510929064-622776-654927 hallmark;refseq 42;35;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE170 prophage linear Cluster_0 Gammaproteobacteria_gi_510929138-1118952-1151103 hallmark;refseq 42;35;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE172 prophage linear Cluster_0 Gammaproteobacteria_gi_510933837-5593058-5601880 noncaudo 13;10;1;2 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa PAK prophage linear Cluster_13 Gammaproteobacteria_gi_510934219-1200852-1211108 noncaudo 14;10;1;3 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa PA14 prophage linear Cluster_13 Gammaproteobacteria_gi_510944555-767655-805692 hallmark;refseq 54;50;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE52 prophage linear Cluster_11 Gammaproteobacteria_gi_510944733 hallmark;refseq 113;73;14;26 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KTE52 extrachromosomal linear Cluster_79 Gammaproteobacteria_gi_510946599-1591236-1600231 noncaudo 11;8;1;2 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa MSH-10 prophage linear Cluster_13 Gammaproteobacteria_gi_510998210 refseq 19;14;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli ATCC 25922 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_510998301 refseq 35;17;9;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli ATCC 25922 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_510998413 hallmark 31;13;7;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli ATCC 25922 extrachromosomal linear Cluster_48 Gammaproteobacteria_gi_510998707-21127-33392 noncaudo 19;5;2;12 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia enterocolitica subsp. palearctica YE-P1 prophage linear Cluster_51 Gammaproteobacteria_gi_510999106-0-8288 noncaudo 13;3;2;8 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia enterocolitica subsp. palearctica YE-P4 prophage linear Cluster_51 Gammaproteobacteria_gi_511009758-122-11106 hallmark;refseq 10;8;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia enterocolitica subsp. palearctica YE-P4 prophage linear Cluster_0 Gammaproteobacteria_gi_511012061-21297-33562 noncaudo 19;5;2;12 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia enterocolitica subsp. palearctica YE-149 prophage linear Cluster_51 Gammaproteobacteria_gi_511012307-21261-33530 noncaudo 19;5;2;12 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia enterocolitica subsp. palearctica YE-150 prophage linear Cluster_51 Gammaproteobacteria_gi_512450094-2691196-2714659 hallmark;refseq 31;20;4;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Dickeya Dickeya solani IPO 2222 prophage linear Cluster_0 Gammaproteobacteria_gi_512451044-2446095-2474129 hallmark;refseq 32;21;8;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Dickeya Dickeya paradisiaca NCPPB 2511 prophage linear Cluster_0 Gammaproteobacteria_gi_512451525-1660170-1682462 hallmark;refseq 27;20;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Dickeya Dickeya zeae NCPPB 3532 prophage linear Cluster_0 Gammaproteobacteria_gi_512454052-2685116-2708579 hallmark;refseq 31;20;4;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Dickeya Dickeya solani GBBC 2040 prophage linear Cluster_0 Gammaproteobacteria_gi_512615653-3159586-3207874 hallmark;noncaudo 76;21;7;48 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas resinovorans NBRC 106553 prophage linear Cluster_14 Gammaproteobacteria_gi_513028875-0-40048 hallmark;refseq 59;54;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Paratyphi A str. GZ9A00052 prophage linear Cluster_11 Gammaproteobacteria_gi_513029383-69845-100286 hallmark;refseq 38;34;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Paratyphi A str. GZ9A00052 prophage linear Cluster_0 Gammaproteobacteria_gi_513037149-0-40044 hallmark;refseq 58;53;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Paratyphi A str. GXS2268 prophage linear Cluster_11 Gammaproteobacteria_gi_513037970-0-40048 hallmark;refseq 60;55;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Paratyphi A str. JX05-19 prophage linear Cluster_11 Gammaproteobacteria_gi_513038082-69847-100472 hallmark;refseq 40;35;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Paratyphi A str. JX05-19 prophage linear Cluster_0 Gammaproteobacteria_gi_513038397-0-40084 hallmark;refseq 59;54;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Paratyphi A str. YN09620 prophage linear Cluster_11 Gammaproteobacteria_gi_513038608-69838-100279 hallmark;refseq 38;34;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Paratyphi A str. YN09620 prophage linear Cluster_0 Gammaproteobacteria_gi_513039543-33597-64038 hallmark;refseq 39;34;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Paratyphi A str. ZJ98-53 prophage linear Cluster_0 Gammaproteobacteria_gi_514076114 refseq 19;11;1;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae B5055 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_514076434 hallmark;refseq 10;7;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae B5055 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_514077031 hallmark;refseq 12;11;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae B5055 extrachromosomal linear Cluster_25 Gammaproteobacteria_gi_514077890 hallmark;refseq 31;21;5;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae B5055 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_514078104 hallmark;refseq 13;12;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae B5055 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_514165697 hallmark;refseq 23;13;5;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Pasteurella Pasteurella multocida P1933 extrachromosomal linear Cluster_179 Gammaproteobacteria_gi_514165742 hallmark;refseq 19;17;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Pasteurella Pasteurella multocida P1933 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_514165787 hallmark 15;6;7;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Pasteurella Pasteurella multocida P1933 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_514165809 hallmark;refseq 19;10;;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Pasteurella Pasteurella multocida P1933 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_514165844 hallmark 15;6;5;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Pasteurella Pasteurella multocida P1933 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_514187899 hallmark 11;2;2;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Pasteurella Pasteurella multocida 1500C extrachromosomal linear Cluster_572 Gammaproteobacteria_gi_514187942 hallmark;refseq 10;6;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Pasteurella Pasteurella multocida 1500C extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_514347535 hallmark;refseq 18;13;;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter guillouiae MSP4-18 extrachromosomal linear Cluster_24 Gammaproteobacteria_gi_514347541 refseq 8;7;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter guillouiae MSP4-18 extrachromosomal linear Cluster_109 Gammaproteobacteria_gi_514347546 hallmark;noncaudo 6;2;;4 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter guillouiae MSP4-18 extrachromosomal linear Cluster_165 Gammaproteobacteria_gi_514350906 hallmark;refseq 69;35;7;27 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter gyllenbergii MTCC 11365 extrachromosomal circular Cluster_24 Gammaproteobacteria_gi_514965089 hallmark 86;19;41;26 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii NIPH 410 extrachromosomal linear Cluster_19 Gammaproteobacteria_gi_514972204 hallmark;refseq 47;27;2;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter gyllenbergii CIP 110306 extrachromosomal circular Cluster_0 Gammaproteobacteria_gi_515027508-42428-77208 hallmark;refseq 44;35;3;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Dublin str. DG22 prophage linear Cluster_0 Gammaproteobacteria_gi_515034726 hallmark;refseq 62;50;6;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Dublin str. DG22 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_515048871 hallmark;refseq 45;31;10;4 Viruses;unclassified;unclassified;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Dublin str. DG22 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_515062936 hallmark;refseq 34;14;6;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Dublin str. DG22 extrachromosomal linear Cluster_82 Gammaproteobacteria_gi_515065271 hallmark;refseq 33;19;10;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. 08-1080 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_515086630 hallmark;refseq 28;24;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. 2009K1726 extrachromosomal linear Cluster_54 Gammaproteobacteria_gi_515086799 refseq 18;18;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. 2009K1726 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_515108094 refseq 30;23;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. 2010K-0267 extrachromosomal linear Cluster_296 Gammaproteobacteria_gi_515108418 hallmark;refseq 28;24;1;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. 2010K-0267 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_515112003 hallmark;refseq 28;24;1;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. 2010K-0271 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_515115051 refseq 31;24;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. 2010K-0271 extrachromosomal linear Cluster_296 Gammaproteobacteria_gi_515122304 hallmark;refseq 28;24;1;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. 2010K-0284 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_515123067 refseq 30;23;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. 2010K-0284 extrachromosomal linear Cluster_296 Gammaproteobacteria_gi_515140949 refseq 33;25;5;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. 2010K-0286 extrachromosomal linear Cluster_296 Gammaproteobacteria_gi_515144125 hallmark;refseq 28;24;1;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. 2010K-0286 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_51594359-2097182-2137889 hallmark;refseq 54;39;6;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pseudotuberculosis IP 32953 prophage linear Cluster_0 Gammaproteobacteria_gi_518661174 hallmark;refseq 14;12;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas sp. CF149 extrachromosomal linear Cluster_64 Gammaproteobacteria_gi_520761811 hallmark;refseq 34;24;3;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Oceanospirillales;Oceanospirillaceae;unknown Osedax symbiont Rs2 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_520804879-34309-69407 hallmark;refseq;vdb 38;22;13;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas sp. CF161 prophage linear Cluster_0 Gammaproteobacteria_gi_520863496-2088-27350 hallmark;refseq 37;20;9;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. actinidiae ICMP 19103 prophage linear Cluster_71 Gammaproteobacteria_gi_520863623 hallmark;refseq 35;21;3;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. actinidiae ICMP 19103 extrachromosomal linear Cluster_256 Gammaproteobacteria_gi_520864190 hallmark;refseq 25;13;2;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. actinidiae ICMP 19073 extrachromosomal linear Cluster_264 Gammaproteobacteria_gi_520868706 hallmark;vdb 18;7;7;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. actinidiae ICMP 19073 extrachromosomal linear Cluster_415 Gammaproteobacteria_gi_520869003 hallmark;refseq 72;40;4;28 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas stutzeri B1SMN1 extrachromosomal linear Cluster_137 Gammaproteobacteria_gi_520869465 refseq 17;9;1;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. actinidiae ICMP 19073 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_520880721 hallmark;refseq 27;14;9;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. actinidiae ICMP 19071 extrachromosomal linear Cluster_71 Gammaproteobacteria_gi_520881093 hallmark;refseq 32;24;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC28 extrachromosomal linear Cluster_25 Gammaproteobacteria_gi_520881781 hallmark;refseq 28;18;1;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. actinidiae ICMP 19071 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_520882301 hallmark;refseq 37;17;2;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. actinidiae ICMP 19071 extrachromosomal linear Cluster_264 Gammaproteobacteria_gi_520882344 noncaudo 8;2;2;4 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. actinidiae ICMP 19071 extrachromosomal linear Cluster_14 Gammaproteobacteria_gi_520882732 hallmark;refseq 56;33;2;21 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC28 extrachromosomal linear Cluster_63 Gammaproteobacteria_gi_520882848 hallmark;refseq 34;26;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC28 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_520882879 refseq 14;7;2;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. actinidiae ICMP 18886 extrachromosomal linear Cluster_71 Gammaproteobacteria_gi_520883794 hallmark;refseq 51;32;2;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC47 extrachromosomal linear Cluster_63 Gammaproteobacteria_gi_520884196 hallmark;refseq 34;26;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC47 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_520884233 hallmark;refseq 32;24;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC47 extrachromosomal linear Cluster_25 Gammaproteobacteria_gi_520884721-0-26722 hallmark;refseq 31;24;2;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC69 prophage linear Cluster_7 Gammaproteobacteria_gi_520885175 hallmark;refseq 34;26;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC69 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_520885345-0-35118 hallmark;refseq 35;29;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC69 prophage linear Cluster_1 Gammaproteobacteria_gi_520885553-188-19198 hallmark;refseq 30;23;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC69 prophage linear Cluster_37 Gammaproteobacteria_gi_520885951-109269-144391 hallmark;refseq 34;27;2;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC77 prophage linear Cluster_1 Gammaproteobacteria_gi_520885951-6160-25014 hallmark;refseq 32;25;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC77 prophage linear Cluster_37 Gammaproteobacteria_gi_520886014 hallmark;refseq 27;22;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC77 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_520886619-8-26731 hallmark;refseq 30;24;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC77 prophage linear Cluster_7 Gammaproteobacteria_gi_520886923-109275-144397 hallmark;refseq 34;27;2;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC96 prophage linear Cluster_1 Gammaproteobacteria_gi_520886923-6166-25020 hallmark;refseq 32;25;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC96 prophage linear Cluster_37 Gammaproteobacteria_gi_520887479-8-26731 hallmark;refseq 30;24;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC96 prophage linear Cluster_7 Gammaproteobacteria_gi_520887640 hallmark;refseq 34;26;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC96 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_520887690 hallmark;refseq 38;30;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC96 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_520888627-420-25794 hallmark;refseq 27;19;4;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae DMC0799 prophage linear Cluster_0 Gammaproteobacteria_gi_520889350 hallmark;refseq 21;19;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae DMC1097 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_520889400 hallmark;refseq 34;26;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae DMC1097 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_520889514 hallmark;refseq 23;21;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae DMC1097 extrachromosomal linear Cluster_47 Gammaproteobacteria_gi_520889627-8-26731 hallmark;refseq 30;24;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae DMC1097 prophage linear Cluster_7 Gammaproteobacteria_gi_520890109-6160-25014 hallmark;refseq 32;25;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae DMC1097 prophage linear Cluster_37 Gammaproteobacteria_gi_520890224-85541-112264 hallmark;refseq 30;24;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae DMC1316 prophage linear Cluster_7 Gammaproteobacteria_gi_520890512 hallmark;refseq 38;30;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae DMC1316 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_520890569 hallmark;refseq 34;26;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae DMC1316 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_520890760 hallmark;refseq 23;21;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae DMC1316 extrachromosomal linear Cluster_47 Gammaproteobacteria_gi_520891024-188-19198 hallmark;refseq 30;23;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae DMC1316 prophage linear Cluster_37 Gammaproteobacteria_gi_520891079 hallmark;refseq 21;19;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae DMC1316 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_520891282 hallmark;refseq 32;24;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC61 extrachromosomal linear Cluster_25 Gammaproteobacteria_gi_520891446 hallmark;refseq 34;26;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC61 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_520891788 hallmark;refseq 51;32;2;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC61 extrachromosomal linear Cluster_63 Gammaproteobacteria_gi_520892177 hallmark;refseq 32;24;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC33 extrachromosomal linear Cluster_25 Gammaproteobacteria_gi_520892187 refseq 14;11;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC33 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_520892236 hallmark;refseq 20;15;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC33 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_520892570 hallmark;refseq 51;32;2;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC33 extrachromosomal linear Cluster_63 Gammaproteobacteria_gi_520893480-85541-112264 hallmark;refseq 30;24;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC59 prophage linear Cluster_7 Gammaproteobacteria_gi_520893513 hallmark;refseq 34;26;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC59 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_520893753 hallmark;refseq 23;21;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC59 extrachromosomal linear Cluster_47 Gammaproteobacteria_gi_520893834-6160-25170 hallmark;refseq 30;23;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC59 prophage linear Cluster_37 Gammaproteobacteria_gi_520893891 hallmark;refseq 21;19;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC59 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_520893939 hallmark;refseq 28;22;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC59 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_520894058 hallmark;refseq 51;32;2;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC07 extrachromosomal linear Cluster_63 Gammaproteobacteria_gi_520894604 hallmark;refseq 34;26;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC07 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_520894632 hallmark;refseq 32;24;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC07 extrachromosomal linear Cluster_25 Gammaproteobacteria_gi_520895009 hallmark 23;7;5;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC07 extrachromosomal linear Cluster_117 Gammaproteobacteria_gi_520895229-109269-144391 hallmark;refseq 34;27;2;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC17 prophage linear Cluster_1 Gammaproteobacteria_gi_520895229-6160-25014 hallmark;refseq 32;25;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC17 prophage linear Cluster_37 Gammaproteobacteria_gi_520895533-85541-112264 hallmark;refseq 30;24;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC17 prophage linear Cluster_7 Gammaproteobacteria_gi_520895591 hallmark;refseq 26;20;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC17 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_520895862 hallmark;refseq 30;24;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC17 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_520896534-109275-144415 hallmark;refseq 35;28;2;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC18 prophage linear Cluster_1 Gammaproteobacteria_gi_520896534-6166-25020 hallmark;refseq 32;25;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC18 prophage linear Cluster_37 Gammaproteobacteria_gi_520896976 hallmark;refseq 34;26;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC18 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_520897023-85541-112264 hallmark;refseq 30;24;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC18 prophage linear Cluster_7 Gammaproteobacteria_gi_520897297 hallmark;refseq 32;24;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC31 extrachromosomal linear Cluster_25 Gammaproteobacteria_gi_520897374 hallmark;refseq 51;32;2;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC31 extrachromosomal linear Cluster_63 Gammaproteobacteria_gi_520897593 hallmark;refseq 34;26;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC31 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_520897631 hallmark 23;7;5;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC31 extrachromosomal linear Cluster_117 Gammaproteobacteria_gi_520898000 hallmark;refseq 34;26;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC06 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_520898076 hallmark;refseq 32;24;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC06 extrachromosomal linear Cluster_25 Gammaproteobacteria_gi_520898513-59437-97613 hallmark;refseq 50;32;2;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC06 prophage linear Cluster_63 Gammaproteobacteria_gi_520898957-109269-144409 hallmark;refseq 35;28;2;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC02 prophage linear Cluster_1 Gammaproteobacteria_gi_520898957-6160-25014 hallmark;refseq 32;25;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC02 prophage linear Cluster_37 Gammaproteobacteria_gi_520899284-85541-112264 hallmark;refseq 30;24;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC02 prophage linear Cluster_7 Gammaproteobacteria_gi_520899785 hallmark;refseq 34;26;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC02 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_520900328-109269-144391 hallmark;refseq 34;27;2;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC67 prophage linear Cluster_1 Gammaproteobacteria_gi_520900328-6160-25014 hallmark;refseq 32;25;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC67 prophage linear Cluster_37 Gammaproteobacteria_gi_520900765 hallmark;refseq 34;26;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC67 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_520901075-17-26731 hallmark;refseq 30;24;1;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC67 prophage linear Cluster_7 Gammaproteobacteria_gi_520901793-43423-79658 hallmark;refseq 41;25;5;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC179 prophage linear Cluster_0 Gammaproteobacteria_gi_520903657 hallmark;refseq 34;27;2;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae 160_1080 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_520903954 hallmark;refseq 32;24;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae 160_1080 extrachromosomal linear Cluster_25 Gammaproteobacteria_gi_520903994 hallmark;refseq 51;32;2;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae 160_1080 extrachromosomal linear Cluster_63 Gammaproteobacteria_gi_520904383 hallmark;refseq 56;33;2;21 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae 120_1020 extrachromosomal linear Cluster_63 Gammaproteobacteria_gi_520904594 hallmark;refseq 44;20;13;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. theae ICMP 3923 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_520904695 hallmark;refseq 34;26;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae 120_1020 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_520905119 hallmark;refseq 32;15;11;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. theae ICMP 3923 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_520905188 hallmark;refseq 32;24;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae 120_1020 extrachromosomal linear Cluster_25 Gammaproteobacteria_gi_520905498 hallmark;refseq 32;24;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae 140_1040 extrachromosomal linear Cluster_25 Gammaproteobacteria_gi_520905631 hallmark;refseq 27;14;9;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. actinidiae ICMP 19072 extrachromosomal linear Cluster_71 Gammaproteobacteria_gi_520905678 hallmark;refseq 34;26;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae 140_1040 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_520905738 hallmark 23;7;5;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae 140_1040 extrachromosomal linear Cluster_117 Gammaproteobacteria_gi_520905957 hallmark;refseq 51;32;2;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae 140_1040 extrachromosomal linear Cluster_63 Gammaproteobacteria_gi_520906104 hallmark;refseq 28;19;1;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. actinidiae ICMP 19072 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_520906408 hallmark;refseq 36;17;2;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. actinidiae ICMP 19072 extrachromosomal linear Cluster_264 Gammaproteobacteria_gi_520906543 hallmark;refseq 34;26;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae 280_1220 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_520906673 hallmark;refseq 32;24;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae 280_1220 extrachromosomal linear Cluster_25 Gammaproteobacteria_gi_520907198 hallmark;refseq 47;22;12;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. actinidiae ICMP 19068 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_520913670 hallmark;refseq;vdb 79;20;25;34 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 extrachromosomal linear Cluster_300 Gammaproteobacteria_gi_520923305 refseq 13;7;1;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. actinidiae ICMP 19104 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_520923549 hallmark;refseq 48;22;12;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. actinidiae ICMP 19104 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_520924374 hallmark;refseq 38;20;10;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. actinidiae ICMP 19102 extrachromosomal linear Cluster_71 Gammaproteobacteria_gi_520924466 hallmark;refseq 32;21;3;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. actinidiae ICMP 19102 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_520925119 hallmark;refseq 47;22;12;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. actinidiae ICMP 9855 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_520925570 hallmark;refseq 35;22;3;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. actinidiae ICMP 19100 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_520926852 refseq 28;12;3;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. actinidiae ICMP 19100 extrachromosomal linear Cluster_264 Gammaproteobacteria_gi_520928725 noncaudo 12;4;1;7 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. actinidiae ICMP 19098 extrachromosomal linear Cluster_532 Gammaproteobacteria_gi_520928733 hallmark;refseq 37;24;2;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. actinidiae ICMP 19098 extrachromosomal linear Cluster_256 Gammaproteobacteria_gi_520950817 noncaudo 12;4;1;7 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. actinidiae ICMP 18883 extrachromosomal linear Cluster_532 Gammaproteobacteria_gi_520950882 hallmark;refseq 37;24;2;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. actinidiae ICMP 18883 extrachromosomal linear Cluster_256 Gammaproteobacteria_gi_520951417 hallmark 17;2;5;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Phikzlikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. actinidiae ICMP 19095 extrachromosomal linear unclustered Gammaproteobacteria_gi_520952737 hallmark;refseq 37;24;2;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. actinidiae ICMP 19095 extrachromosomal linear Cluster_256 Gammaproteobacteria_gi_520953981 hallmark;refseq 36;23;2;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. actinidiae ICMP 19094 extrachromosomal linear Cluster_256 Gammaproteobacteria_gi_520954033 refseq 14;8;1;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. actinidiae ICMP 19094 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_520966101 hallmark;refseq 15;8;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. actinidiae ICMP 19101 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_520971817 hallmark;refseq 15;8;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. actinidiae ICMP 19097 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_520971818 refseq 28;11;8;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. actinidiae ICMP 19097 extrachromosomal linear Cluster_71 Gammaproteobacteria_gi_520972227 refseq 28;11;8;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. actinidiae ICMP 18801 extrachromosomal linear Cluster_71 Gammaproteobacteria_gi_520972228 hallmark;refseq 15;8;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas syringae pv. actinidiae ICMP 18801 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_521101255 hallmark 22;9;6;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio fluvialis I21563 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_521101461-54755-62751 refseq 9;8;;1 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio fluvialis I21563 prophage linear Cluster_130 Gammaproteobacteria_gi_522837800 hallmark;refseq 23;15;7;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli E2265 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_523670247 hallmark;refseq 51;32;2;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC09 extrachromosomal linear Cluster_63 Gammaproteobacteria_gi_523670252 hallmark;refseq 34;26;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC09 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_523670456 hallmark;refseq 32;24;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC09 extrachromosomal linear Cluster_25 Gammaproteobacteria_gi_523670479 hallmark;refseq 34;26;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC01 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_523670518 hallmark;refseq 56;33;2;21 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC01 extrachromosomal linear Cluster_63 Gammaproteobacteria_gi_523670534 hallmark;refseq 32;24;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC01 extrachromosomal linear Cluster_25 Gammaproteobacteria_gi_523671585 hallmark;refseq 12;7;;5 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC81 extrachromosomal linear Cluster_36 Gammaproteobacteria_gi_523675479 hallmark;refseq 32;24;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC27 extrachromosomal linear Cluster_25 Gammaproteobacteria_gi_523675566 hallmark;refseq 34;26;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC27 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_523675662 hallmark;refseq 51;32;2;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC27 extrachromosomal linear Cluster_63 Gammaproteobacteria_gi_523675703 hallmark 23;7;5;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC27 extrachromosomal linear Cluster_117 Gammaproteobacteria_gi_523675727 hallmark;refseq 32;24;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC24 extrachromosomal linear Cluster_25 Gammaproteobacteria_gi_523675784 hallmark;refseq 56;33;2;21 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC24 extrachromosomal linear Cluster_63 Gammaproteobacteria_gi_523675791 hallmark 23;7;5;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC24 extrachromosomal linear Cluster_117 Gammaproteobacteria_gi_523675852 hallmark;refseq 34;26;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC24 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_523675913 hallmark;refseq 32;24;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC26 extrachromosomal linear Cluster_25 Gammaproteobacteria_gi_523675916 hallmark;refseq 34;26;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC26 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_523676017 hallmark 23;7;5;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC26 extrachromosomal linear Cluster_117 Gammaproteobacteria_gi_523676022 hallmark;refseq 51;32;2;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC26 extrachromosomal linear Cluster_63 Gammaproteobacteria_gi_523676119 hallmark;refseq 39;30;3;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC22 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_523676120-66511-93225 hallmark;refseq 30;24;1;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC22 prophage linear Cluster_7 Gammaproteobacteria_gi_523676144 hallmark;refseq 34;26;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC22 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_523676202-109269-144391 hallmark;refseq 34;27;2;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC22 prophage linear Cluster_1 Gammaproteobacteria_gi_523676202-6160-25014 hallmark;refseq 32;25;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC22 prophage linear Cluster_37 Gammaproteobacteria_gi_523676501 hallmark;refseq 32;24;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC04 extrachromosomal linear Cluster_25 Gammaproteobacteria_gi_523676547 hallmark 23;7;5;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC04 extrachromosomal linear Cluster_117 Gammaproteobacteria_gi_523676561 hallmark;refseq 34;26;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC04 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_523676565 hallmark;refseq 51;32;2;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC04 extrachromosomal linear Cluster_63 Gammaproteobacteria_gi_523676632-6160-25170 hallmark;refseq 30;23;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae VAKPC252 prophage linear Cluster_37 Gammaproteobacteria_gi_523676724-83912-119034 hallmark;refseq 35;29;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae VAKPC252 prophage linear Cluster_1 Gammaproteobacteria_gi_523676744 hallmark;refseq 34;26;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae VAKPC252 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_523676810 hallmark;refseq 39;30;3;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae VAKPC252 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_523676817-85541-112264 hallmark;refseq 29;24;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae VAKPC252 prophage linear Cluster_7 Gammaproteobacteria_gi_523676859 hallmark;refseq 22;20;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae VAKPC254 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_523676893 hallmark;refseq 24;22;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae VAKPC254 extrachromosomal linear Cluster_47 Gammaproteobacteria_gi_523676962-85541-112264 hallmark;refseq 30;24;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae VAKPC254 prophage linear Cluster_7 Gammaproteobacteria_gi_523677034-6161-25015 hallmark;refseq 32;25;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae VAKPC254 prophage linear Cluster_37 Gammaproteobacteria_gi_523677044 hallmark;refseq 38;30;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae VAKPC254 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_523677075 hallmark;refseq 24;18;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae VAKPC254 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_523677089 hallmark;refseq 51;32;2;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae VAKPC269 extrachromosomal linear Cluster_63 Gammaproteobacteria_gi_523677101 hallmark;refseq 34;26;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae VAKPC269 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_523677110 hallmark 23;7;5;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae VAKPC269 extrachromosomal linear Cluster_117 Gammaproteobacteria_gi_523677257 hallmark;refseq 32;24;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae VAKPC269 extrachromosomal linear Cluster_25 Gammaproteobacteria_gi_523677356 hallmark;refseq 32;24;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae VAKPC280 extrachromosomal linear Cluster_25 Gammaproteobacteria_gi_523677363 hallmark;refseq 51;32;2;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae VAKPC280 extrachromosomal linear Cluster_63 Gammaproteobacteria_gi_523677370 hallmark;refseq 34;26;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae VAKPC280 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_523677379 hallmark 23;7;5;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae VAKPC280 extrachromosomal linear Cluster_117 Gammaproteobacteria_gi_523677481 hallmark;refseq 32;24;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae VAKPC270 extrachromosomal linear Cluster_25 Gammaproteobacteria_gi_523677568 hallmark;refseq 34;26;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae VAKPC270 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_523677723 hallmark 23;7;5;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae VAKPC270 extrachromosomal linear Cluster_117 Gammaproteobacteria_gi_523680227 hallmark;refseq 51;32;2;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae VAKPC270 extrachromosomal linear Cluster_63 Gammaproteobacteria_gi_523680304 hallmark;refseq 32;24;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae VAKPC276 extrachromosomal linear Cluster_25 Gammaproteobacteria_gi_523680324 hallmark;refseq 51;32;2;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae VAKPC276 extrachromosomal linear Cluster_63 Gammaproteobacteria_gi_523680408 hallmark;refseq 34;26;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae VAKPC276 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_523680448 refseq 22;18;;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae VAKPC276 extrachromosomal linear Cluster_37 Gammaproteobacteria_gi_523680493 hallmark 23;7;5;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae VAKPC276 extrachromosomal linear Cluster_117 Gammaproteobacteria_gi_523680552 hallmark;refseq 39;30;3;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae VAKPC297 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_523680662 hallmark;refseq 34;27;2;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae VAKPC297 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_523680690-0-35117 hallmark;refseq 34;28;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae VAKPC297 prophage linear Cluster_1 Gammaproteobacteria_gi_523680749-6160-25170 hallmark;refseq 30;23;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae VAKPC297 prophage linear Cluster_37 Gammaproteobacteria_gi_523680764-85541-112264 hallmark;refseq 30;24;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae VAKPC297 prophage linear Cluster_7 Gammaproteobacteria_gi_523680801 hallmark;refseq 32;24;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae VAKPC309 extrachromosomal linear Cluster_25 Gammaproteobacteria_gi_523680904 hallmark;refseq 34;26;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae VAKPC309 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_523680927 hallmark 23;7;5;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae VAKPC309 extrachromosomal linear Cluster_117 Gammaproteobacteria_gi_523680947 hallmark;refseq 51;32;2;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae VAKPC309 extrachromosomal linear Cluster_63 Gammaproteobacteria_gi_523681683-41-10779 hallmark;refseq 10;8;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae KP-11 prophage linear Cluster_0 Gammaproteobacteria_gi_523681729 hallmark 30;11;12;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae KP-11 extrachromosomal linear Cluster_28 Gammaproteobacteria_gi_523682055 hallmark;refseq 45;33;6;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae KP-11 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_523682484 hallmark;refseq 31;29;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae KP-11 extrachromosomal linear Cluster_54 Gammaproteobacteria_gi_523683103 hallmark;refseq 34;26;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae 361_1301 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_523683158 hallmark;refseq 32;24;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae 361_1301 extrachromosomal linear Cluster_25 Gammaproteobacteria_gi_523683278 hallmark;refseq 51;32;2;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae 361_1301 extrachromosomal linear Cluster_63 Gammaproteobacteria_gi_523683306 hallmark;refseq 32;24;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae 440_1540 extrachromosomal linear Cluster_25 Gammaproteobacteria_gi_523683413 hallmark;refseq 34;26;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae 440_1540 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_523683505 hallmark;refseq 51;32;2;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae 440_1540 extrachromosomal linear Cluster_63 Gammaproteobacteria_gi_523683511 hallmark 23;7;5;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae 440_1540 extrachromosomal linear Cluster_117 Gammaproteobacteria_gi_523683578 hallmark;refseq 32;24;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae 500_1420 extrachromosomal linear Cluster_25 Gammaproteobacteria_gi_523683633 hallmark;refseq 34;27;2;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae 500_1420 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_523683677 hallmark 23;7;5;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae 500_1420 extrachromosomal linear Cluster_117 Gammaproteobacteria_gi_523683695 hallmark;refseq 51;32;2;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae 500_1420 extrachromosomal linear Cluster_63 Gammaproteobacteria_gi_523683736-83912-119034 hallmark;refseq 34;28;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae 540_1460 prophage linear Cluster_1 Gammaproteobacteria_gi_523683771-6166-25176 hallmark;refseq 30;23;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae 540_1460 prophage linear Cluster_37 Gammaproteobacteria_gi_523683815 hallmark;refseq 18;15;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae 540_1460 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_523683956-20765-47488 hallmark;refseq 29;24;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae 540_1460 prophage linear Cluster_7 Gammaproteobacteria_gi_523683981 hallmark;refseq 20;14;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae 540_1460 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_523684047 hallmark;refseq 34;27;2;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae 646_1568 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_523684117 hallmark;refseq 51;32;2;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae 646_1568 extrachromosomal linear Cluster_63 Gammaproteobacteria_gi_523684145 hallmark;refseq 32;24;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae 646_1568 extrachromosomal linear Cluster_25 Gammaproteobacteria_gi_523684181-193-19203 hallmark;refseq 30;23;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC40 prophage linear Cluster_37 Gammaproteobacteria_gi_523684210-85541-112264 hallmark;refseq 30;24;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC40 prophage linear Cluster_7 Gammaproteobacteria_gi_523684253 hallmark;refseq 34;26;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC40 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_523684289-0-35115 hallmark;refseq 35;29;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC40 prophage linear Cluster_1 Gammaproteobacteria_gi_523684341 hallmark 30;11;12;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae KP-7 extrachromosomal linear Cluster_28 Gammaproteobacteria_gi_523684725 hallmark;refseq 31;29;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae KP-7 extrachromosomal linear Cluster_54 Gammaproteobacteria_gi_523684832 hallmark;refseq 45;34;6;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae KP-7 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_523684996 hallmark;refseq 21;19;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae DMC0526 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_523685061-85541-112264 hallmark;refseq 30;24;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae DMC0526 prophage linear Cluster_7 Gammaproteobacteria_gi_523685089-94865-113719 hallmark;refseq 32;25;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae DMC0526 prophage linear Cluster_37 Gammaproteobacteria_gi_523685159 hallmark;refseq 34;26;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae DMC0526 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_523685210 hallmark;refseq 23;21;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae DMC0526 extrachromosomal linear Cluster_47 Gammaproteobacteria_gi_523685237 hallmark;refseq 34;26;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC48 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_523685383-85543-112257 hallmark;refseq 31;24;2;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC48 prophage linear Cluster_7 Gammaproteobacteria_gi_523685392-196-19206 hallmark;refseq 30;23;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC48 prophage linear Cluster_37 Gammaproteobacteria_gi_523685403-0-35121 hallmark;refseq 34;28;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC48 prophage linear Cluster_1 Gammaproteobacteria_gi_523685516-83898-119020 hallmark;refseq 34;28;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC32 prophage linear Cluster_1 Gammaproteobacteria_gi_523685584-85541-112264 hallmark;refseq 30;24;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC32 prophage linear Cluster_7 Gammaproteobacteria_gi_523685610 hallmark;refseq 34;26;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC32 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_523685752-6164-25174 hallmark;refseq 30;23;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC32 prophage linear Cluster_37 Gammaproteobacteria_gi_523685993-30502-66737 hallmark;refseq 41;25;5;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC57 prophage linear Cluster_0 Gammaproteobacteria_gi_523686317 hallmark;refseq 34;26;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC05 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_523686419 hallmark;refseq 32;24;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC05 extrachromosomal linear Cluster_25 Gammaproteobacteria_gi_523686459 hallmark;refseq 51;32;2;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC05 extrachromosomal linear Cluster_63 Gammaproteobacteria_gi_523686509 hallmark;refseq 32;24;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC 52 extrachromosomal linear Cluster_25 Gammaproteobacteria_gi_523686512 hallmark;refseq 51;32;2;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC 52 extrachromosomal linear Cluster_63 Gammaproteobacteria_gi_523686591 hallmark;refseq 34;26;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC 52 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_523686783 hallmark;refseq 34;26;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC45 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_523686831-6162-25172 hallmark;refseq 30;23;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC45 prophage linear Cluster_37 Gammaproteobacteria_gi_523686869-85541-112264 hallmark;refseq 30;24;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC45 prophage linear Cluster_7 Gammaproteobacteria_gi_523686942-83912-119034 hallmark;refseq 34;28;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC45 prophage linear Cluster_1 Gammaproteobacteria_gi_523687123 hallmark;refseq 32;24;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae VAKPC278 extrachromosomal linear Cluster_25 Gammaproteobacteria_gi_523687137 hallmark 23;7;5;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae VAKPC278 extrachromosomal linear Cluster_117 Gammaproteobacteria_gi_523687165 hallmark;refseq 51;32;2;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae VAKPC278 extrachromosomal linear Cluster_63 Gammaproteobacteria_gi_523687229 hallmark;refseq 34;26;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae VAKPC278 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_523687267 hallmark;refseq 34;26;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC29 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_523687353 hallmark;refseq 32;24;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC29 extrachromosomal linear Cluster_25 Gammaproteobacteria_gi_523687381 hallmark 23;7;5;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC29 extrachromosomal linear Cluster_117 Gammaproteobacteria_gi_523687400 hallmark;refseq 51;32;2;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UHKPC29 extrachromosomal linear Cluster_63 Gammaproteobacteria_gi_525655613-2179369-2216636 hallmark;refseq 55;35;8;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Mannheimia Mannheimia haemolytica D171 prophage linear Cluster_39 Gammaproteobacteria_gi_525655613-359752-411892 hallmark;refseq 73;45;13;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Mannheimia Mannheimia haemolytica D171 prophage linear Cluster_293 Gammaproteobacteria_gi_525662379-203891-239018 hallmark;refseq 49;48;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Mannheimia Mannheimia haemolytica D174 prophage linear Cluster_0 Gammaproteobacteria_gi_525701099-393251-428368 hallmark;refseq 50;49;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Mannheimia Mannheimia haemolytica D153 prophage linear Cluster_0 Gammaproteobacteria_gi_525814190-1209310-1240484 hallmark;refseq 41;36;5; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Heidelberg str. 41578 prophage linear Cluster_0 Gammaproteobacteria_gi_525847173-1369122-1377737 hallmark;noncaudo 15;9;;6 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio parahaemolyticus O1:Kuk str. FDA_R31 prophage linear Cluster_14 Gammaproteobacteria_gi_525852846-865879-874630 noncaudo 9;6;1;2 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio parahaemolyticus O1:K33 str. CDC_K4557 prophage linear Cluster_130 Gammaproteobacteria_gi_525855729-2068849-2111153 hallmark;refseq 62;39;16;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Cubana str. CFSAN002050 prophage linear Cluster_28 Gammaproteobacteria_gi_525855729-2971232-3013993 hallmark;refseq 65;54;4;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Cubana str. CFSAN002050 prophage linear Cluster_4 Gammaproteobacteria_gi_525855729-481962-496859 hallmark;refseq 17;14;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Cubana str. CFSAN002050 prophage linear Cluster_22 Gammaproteobacteria_gi_525855729-523962-573061 hallmark;refseq 76;61;4;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Cubana str. CFSAN002050 prophage linear Cluster_23 Gammaproteobacteria_gi_525945526-2892553-2940226 hallmark;refseq 52;42;7;3 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000189 prophage linear Cluster_1 Gammaproteobacteria_gi_525949893-2014713-2023446 noncaudo 13;10;;3 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio parahaemolyticus O1:Kuk str. FDA_R31 prophage linear Cluster_14 Gammaproteobacteria_gi_526218030-4016064-4066234 hallmark;refseq 57;53;4; Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella "Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. 08-1736" prophage linear Cluster_1 Gammaproteobacteria_gi_526218030-4104421-4135352 hallmark;refseq 43;36;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella "Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. 08-1736" prophage linear Cluster_0 Gammaproteobacteria_gi_526225953-479590-515443 hallmark;refseq 55;26;8;21 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella bongori N268-08 prophage linear Cluster_72 Gammaproteobacteria_gi_526467231-1147024-1183338 hallmark;refseq 51;49;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Mannheimia Mannheimia haemolytica USMARC_2286 prophage linear Cluster_0 Gammaproteobacteria_gi_52788052-56-81945 hallmark;refseq;vdb 92;75;11;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis prophage linear Cluster_9 Gammaproteobacteria_gi_528816716-1842653-1879521 hallmark;refseq 53;46;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. USMARC-S3124.1 prophage linear Cluster_11 Gammaproteobacteria_gi_528816716-4701997-4732702 hallmark;refseq 39;34;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. USMARC-S3124.1 prophage linear Cluster_0 Gammaproteobacteria_gi_529218781-2778116-2813176 hallmark;refseq 52;43;5;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Pullorum str. S06004 prophage linear Cluster_0 Gammaproteobacteria_gi_530627845-2989291-3034242 hallmark;refseq 63;42;5;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae JM45 prophage linear Cluster_148 Gammaproteobacteria_gi_537470952-600118-642810 hallmark;refseq 59;28;15;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O25b:H4-ST131 str. EC958 prophage linear Cluster_0 Gammaproteobacteria_gi_537684926 hallmark;refseq 14;14;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. STm5 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_537684947 hallmark;refseq 18;17;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. STm5 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_537685614 refseq 21;19;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. STm5 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_537685699 hallmark;refseq 22;22;; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. STm5 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_537693701 hallmark;refseq 24;23;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. STm12 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_537694345 hallmark;refseq 32;32;; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. STm12 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_537695901 hallmark;refseq 26;24;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. STm12 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_537698861 hallmark;refseq 33;33;; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. STm11 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_537699153 hallmark;refseq 17;17;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. STm11 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_537700186 hallmark;refseq 21;19;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. STm11 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_537701445 hallmark;refseq 30;30;; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. STm10 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_537702062 hallmark;refseq 18;17;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. STm10 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_537702831 hallmark;refseq 21;20;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. STm10 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_537704131 hallmark;refseq 23;21;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. STm6 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_537704469 hallmark;refseq 21;20;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. STm6 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_537704813 hallmark;refseq 32;32;; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. STm6 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_537707542 hallmark;refseq 18;17;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. STm4 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_537707599 hallmark;refseq 33;33;; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. STm4 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_537707826 hallmark;refseq 14;14;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. STm4 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_537711904 hallmark;refseq 21;20;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. STm3 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_537711937 hallmark;refseq 17;17;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. STm3 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_537712217 hallmark;refseq 33;33;; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. STm3 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_537717974 hallmark;refseq 31;31;; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. STm9 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_537717983 hallmark;refseq 18;17;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. STm9 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_537718003 hallmark;refseq 21;20;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. STm9 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_537720463 hallmark;refseq 18;17;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. STm8 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_537720698 hallmark;refseq 14;14;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. STm8 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_537720821 hallmark;refseq 30;30;; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. STm8 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_537726063 hallmark;refseq 21;20;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. STm1 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_537726619 hallmark;refseq 23;21;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. STm1 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_537726892 hallmark;refseq 33;33;; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. STm1 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_537850335-459290-495692 hallmark;refseq 50;50;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa HB13 prophage linear Cluster_59 Gammaproteobacteria_gi_538038354 hallmark;refseq 23;14;4;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Haemophilus Haemophilus parasuis 29755 extrachromosomal linear Cluster_179 Gammaproteobacteria_gi_538038770 hallmark;refseq 27;12;4;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Haemophilus Haemophilus parasuis 29755 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_538042148 refseq 52;21;15;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Haemophilus Haemophilus parasuis 29755 extrachromosomal linear Cluster_19 Gammaproteobacteria_gi_538042905 hallmark;refseq 14;14;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Haemophilus Haemophilus parasuis 29755 extrachromosomal linear Cluster_44 Gammaproteobacteria_gi_541866813-411576-421696 noncaudo 12;5;3;4 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio campbellii ATCC BAA-1116 prophage linear Cluster_265 Gammaproteobacteria_gi_541870142-1104552-1114328 noncaudo 16;9;;7 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio campbellii ATCC BAA-1116 prophage linear Cluster_14 Gammaproteobacteria_gi_543939240-106086-120169 hallmark;refseq 17;12;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Alteromonadales;Pseudoalteromonadaceae;Pseudoalteromonas Pseudoalteromonas citrea NCIMB 1889 prophage linear Cluster_0 Gammaproteobacteria_gi_543939314 hallmark;refseq 26;10;2;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Alteromonadales;Pseudoalteromonadaceae;Pseudoalteromonas Pseudoalteromonas citrea NCIMB 1889 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_543939413 hallmark;refseq 10;5;;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Twortlikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Alteromonadales;Pseudoalteromonadaceae;Pseudoalteromonas Pseudoalteromonas citrea NCIMB 1889 extrachromosomal linear Cluster_181 Gammaproteobacteria_gi_543939686 hallmark;refseq 34;16;4;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Alteromonadales;Pseudoalteromonadaceae;Pseudoalteromonas Pseudoalteromonas piscicida JCM 20779 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_543939793 hallmark;refseq 24;14;5;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Alteromonadales;Pseudoalteromonadaceae;Pseudoalteromonas Pseudoalteromonas piscicida JCM 20779 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_543941914-670290-680141 hallmark;noncaudo 16;10;;6 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio alginolyticus NBRC 15630 = ATCC 17749 prophage linear Cluster_14 Gammaproteobacteria_gi_543945158-49364-84862 hallmark 43;18;7;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Alteromonadales;Pseudoalteromonadaceae;Pseudoalteromonas Pseudoalteromonas rubra ATCC 29570 prophage linear Cluster_3 Gammaproteobacteria_gi_543973209-1326753-1336653 hallmark;noncaudo 15;9;2;4 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio alginolyticus NBRC 15630 = ATCC 17749 prophage linear Cluster_14 Gammaproteobacteria_gi_544388862-2246773-2277266 hallmark;refseq 40;33;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli LY180 prophage linear Cluster_0 Gammaproteobacteria_gi_544388862-4251415-4283570 hallmark;refseq 42;35;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli LY180 prophage linear Cluster_0 Gammaproteobacteria_gi_544574430-4384390-4414909 hallmark;refseq 38;33;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PMV-1 prophage linear Cluster_0 Gammaproteobacteria_gi_544574430-4541333-4581880 hallmark;refseq 56;42;10;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli PMV-1 prophage linear Cluster_4 Gammaproteobacteria_gi_544677206 hallmark;refseq 30;13;11;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Haemophilus Haemophilus parasuis str. Nagasaki extrachromosomal linear Cluster_179 Gammaproteobacteria_gi_544677275-2739-16098 hallmark;refseq 24;10;4;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Haemophilus Haemophilus parasuis str. Nagasaki prophage linear Cluster_0 Gammaproteobacteria_gi_544677326-5307-28336 hallmark;refseq 35;21;5;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Haemophilus Haemophilus parasuis str. Nagasaki prophage linear Cluster_2 Gammaproteobacteria_gi_544677753-12497-42429 hallmark;refseq 38;23;11;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Haemophilus Haemophilus parasuis str. Nagasaki prophage linear Cluster_22 Gammaproteobacteria_gi_544678062-42-43795 hallmark;refseq 59;44;9;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Haemophilus Haemophilus parasuis str. Nagasaki prophage linear Cluster_39 Gammaproteobacteria_gi_544678281 hallmark;refseq 28;23;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Haemophilus Haemophilus parasuis str. Nagasaki extrachromosomal linear Cluster_403 Gammaproteobacteria_gi_544678643-2903-35481 hallmark;refseq 53;29;5;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Haemophilus Haemophilus parasuis SW114 prophage linear Cluster_2 Gammaproteobacteria_gi_544682955 hallmark;refseq 52;27;13;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Haemophilus Haemophilus parasuis 84-15995 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_544682979 hallmark;refseq 31;24;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Haemophilus Haemophilus parasuis 84-15995 extrachromosomal linear Cluster_403 Gammaproteobacteria_gi_544682987 refseq 19;11;1;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Haemophilus Haemophilus parasuis 84-15995 extrachromosomal linear Cluster_19 Gammaproteobacteria_gi_544683088 hallmark;refseq 34;21;10;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Haemophilus Haemophilus parasuis 84-15995 extrachromosomal linear Cluster_22 Gammaproteobacteria_gi_544684045-50895-64466 hallmark;refseq;vdb 21;14;2;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Haemophilus Haemophilus parasuis H465 prophage linear Cluster_26 Gammaproteobacteria_gi_544686514 hallmark;refseq 80;65;6;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Haemophilus Haemophilus parasuis 174 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_544750553 hallmark;refseq 70;38;5;27 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter gerneri MTCC 9824 extrachromosomal circular Cluster_46 Gammaproteobacteria_gi_544750557-19866-58912 hallmark;refseq 52;27;9;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter gerneri MTCC 9824 prophage linear Cluster_122 Gammaproteobacteria_gi_544750573 noncaudo;vdb 7;2;1;4 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter gerneri MTCC 9824 extrachromosomal linear Cluster_165 Gammaproteobacteria_gi_544755166-928-52200 hallmark;refseq 78;48;8;22 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Serratia Serratia fonticola AU-P3(3) prophage linear Cluster_25 Gammaproteobacteria_gi_544757630-10743-32477 hallmark;refseq 34;27;2;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Pantoea Pantoea sp. AS-PWVM4 prophage linear Cluster_0 Gammaproteobacteria_gi_544772957 hallmark;refseq 50;36;6;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae MP14 extrachromosomal linear Cluster_25 Gammaproteobacteria_gi_544772975 hallmark;refseq 24;19;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae MP14 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_544772989-129350-148204 hallmark;refseq 32;25;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae MP14 prophage linear Cluster_37 Gammaproteobacteria_gi_544778255 hallmark;refseq 50;19;2;29 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Stenotrophomonas Stenotrophomonas maltophilia MF89 extrachromosomal linear Cluster_64 Gammaproteobacteria_gi_544781583-12737-51642 hallmark;refseq 53;48;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa WC55 prophage linear Cluster_100 Gammaproteobacteria_gi_544782039-18510-36299 hallmark;refseq 24;14;5;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa WC55 prophage linear Cluster_0 Gammaproteobacteria_gi_544782243 hallmark;refseq 60;41;3;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa WC55 extrachromosomal linear Cluster_164 Gammaproteobacteria_gi_544782651 refseq 35;22;2;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa WC55 extrachromosomal linear Cluster_217 Gammaproteobacteria_gi_544782692 hallmark;refseq 28;15;2;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa WC55 extrachromosomal linear Cluster_217 Gammaproteobacteria_gi_544799236-241189-291873 hallmark;refseq 53;40;4;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Enterobacter Enterobacter cloacae str. Hanford prophage linear Cluster_18 Gammaproteobacteria_gi_544799257-206503-224580 hallmark;refseq 25;21;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Enterobacter Enterobacter cloacae str. Hanford prophage linear Cluster_0 Gammaproteobacteria_gi_544801580-0-35318 hallmark;refseq 47;19;9;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas alcaligenes OT 69 prophage linear Cluster_1 Gammaproteobacteria_gi_544812099 hallmark;refseq 35;25;3;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae UKKV901664 extrachromosomal linear Cluster_25 Gammaproteobacteria_gi_544812130 hallmark;refseq 45;34;3;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae UKKV901664 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_544812149 refseq 29;20;1;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae UKKV901664 extrachromosomal linear Cluster_37 Gammaproteobacteria_gi_544812319 refseq 11;7;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae UKKV901664 extrachromosomal linear Cluster_427 Gammaproteobacteria_gi_544812333 hallmark;refseq 26;17;2;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae subsp. pneumoniae UKKV901664 extrachromosomal linear Cluster_410 Gammaproteobacteria_gi_544813692-196080-206547 noncaudo 12;5;1;6 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Aeromonadales;Aeromonadaceae;Aeromonas Aeromonas veronii Hm21 prophage linear Cluster_266 Gammaproteobacteria_gi_544815322 hallmark 54;14;4;36 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Aeromonadales;Aeromonadaceae;Aeromonas Aeromonas veronii Hm21 extrachromosomal linear Cluster_249 Gammaproteobacteria_gi_544848218-4074-18989 hallmark;refseq 21;16;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa VRFPA03 prophage linear Cluster_120 Gammaproteobacteria_gi_544848865-10882-20185 hallmark;noncaudo 14;5;2;7 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa VRFPA03 prophage linear Cluster_14 Gammaproteobacteria_gi_544849141-64564-73975 refseq 15;12;;3 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa VRFPA03 prophage linear Cluster_13 Gammaproteobacteria_gi_544850496-0-16391 hallmark;refseq 22;22;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Mannheimia Mannheimia haemolytica D193 prophage linear Cluster_0 Gammaproteobacteria_gi_544850501 hallmark;refseq 60;30;14;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Mannheimia Mannheimia haemolytica D193 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_544850511 hallmark;refseq 55;32;8;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Mannheimia Mannheimia haemolytica D193 extrachromosomal linear Cluster_39 Gammaproteobacteria_gi_544850548 hallmark;refseq 20;12;4;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Mannheimia Mannheimia haemolytica D193 extrachromosomal linear Cluster_179 Gammaproteobacteria_gi_544850556 hallmark 22;9;5;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Mannheimia Mannheimia haemolytica D193 extrachromosomal linear Cluster_179 Gammaproteobacteria_gi_544850612-100597-118248 hallmark;refseq 29;28;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Mannheimia Mannheimia haemolytica D193 prophage linear Cluster_0 Gammaproteobacteria_gi_544850669 hallmark;refseq 22;15;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Mannheimia Mannheimia haemolytica MhBrain2012 extrachromosomal linear Cluster_338 Gammaproteobacteria_gi_544850691-114053-149179 hallmark;refseq 50;49;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Mannheimia Mannheimia haemolytica MhBrain2012 prophage linear Cluster_0 Gammaproteobacteria_gi_544850728-1364-32054 hallmark;refseq 45;23;11;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Mannheimia Mannheimia haemolytica MhSwine2000 prophage linear Cluster_21 Gammaproteobacteria_gi_544850740-13380-60194 hallmark;refseq 64;30;13;21 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Mannheimia Mannheimia haemolytica MhSwine2000 prophage linear Cluster_2 Gammaproteobacteria_gi_544850780 hallmark;refseq 39;24;5;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Mannheimia Mannheimia haemolytica MhSwine2000 extrachromosomal linear Cluster_72 Gammaproteobacteria_gi_544850787-0-12748 hallmark;refseq 17;17;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Mannheimia Mannheimia haemolytica MhSwine2000 prophage linear Cluster_0 Gammaproteobacteria_gi_544850854-113815-136068 hallmark;refseq 33;32;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Mannheimia Mannheimia haemolytica MhSwine2000 prophage linear Cluster_0 Gammaproteobacteria_gi_544851018 refseq 20;17;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. STm7 extrachromosomal linear Cluster_82 Gammaproteobacteria_gi_544851026 hallmark;refseq 25;24;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. STm7 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_544851029 hallmark;refseq 27;25;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. STm7 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_544851059 hallmark;refseq 33;33;; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. STm7 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_544865777-45942-81322 hallmark;refseq 49;22;19;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Mannheimia Mannheimia haemolytica D35 prophage linear Cluster_3 Gammaproteobacteria_gi_544866157 hallmark;refseq 41;24;8;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Mannheimia Mannheimia haemolytica D35 extrachromosomal linear Cluster_338 Gammaproteobacteria_gi_544866246 hallmark;refseq 37;16;11;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Mannheimia Mannheimia haemolytica D35 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_544866847-10486-48336 hallmark;refseq 53;50;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Mannheimia Mannheimia haemolytica D38 prophage linear Cluster_0 Gammaproteobacteria_gi_544866857-0-38512 hallmark;refseq 58;27;14;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Mannheimia Mannheimia haemolytica D38 prophage linear Cluster_2 Gammaproteobacteria_gi_544866886 hallmark;refseq 46;25;8;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Mannheimia Mannheimia haemolytica D38 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_544866898 hallmark;refseq 41;21;8;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Mannheimia Mannheimia haemolytica D38 extrachromosomal linear Cluster_72 Gammaproteobacteria_gi_544866954 hallmark;refseq 18;10;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Mannheimia Mannheimia haemolytica D38 extrachromosomal linear Cluster_179 Gammaproteobacteria_gi_544880174 hallmark;refseq 51;26;10;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H21 str. CFSAN002237 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_544880268 hallmark;refseq 20;15;5; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H21 str. CFSAN002237 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_544880368 refseq 26;21;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H21 str. CFSAN002237 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_544880584-9-24941 hallmark;refseq 38;27;8;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H21 str. CFSAN002236 prophage linear Cluster_1 Gammaproteobacteria_gi_544880712 refseq 29;20;6;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H21 str. CFSAN002236 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_544880783 hallmark;refseq 20;15;5; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H21 str. CFSAN002236 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_544880789 hallmark;refseq 15;12;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H21 str. CFSAN002236 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_544880810 hallmark 20;8;7;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli O104:H21 str. CFSAN002236 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_544880920-12571-24033 hallmark;refseq 10;8;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Heidelberg str. SARA33 prophage linear Cluster_0 Gammaproteobacteria_gi_544881198-0-25852 hallmark;refseq;vdb 43;33;6;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Heidelberg str. SARA33 prophage linear Cluster_0 Gammaproteobacteria_gi_544881331-18717-58343 hallmark;refseq 64;54;5;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Heidelberg str. SARA33 prophage linear Cluster_11 Gammaproteobacteria_gi_544881766-44405-85630 hallmark;refseq 57;48;2;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Muenchen str. RKS4129 prophage linear Cluster_2 Gammaproteobacteria_gi_544905836 hallmark;refseq 15;15;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii 1605 extrachromosomal linear Cluster_46 Gammaproteobacteria_gi_544915306-1917-21810 hallmark;refseq;vdb 27;19;4;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Photorhabdus Photorhabdus temperata subsp. temperata M1021 prophage linear Cluster_0 Gammaproteobacteria_gi_544916481 hallmark;refseq 19;18;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Photorhabdus Photorhabdus temperata subsp. temperata M1021 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_544916594 refseq 35;12;3;20 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Photorhabdus Photorhabdus temperata subsp. temperata M1021 extrachromosomal linear Cluster_37 Gammaproteobacteria_gi_544916610 hallmark;refseq 17;15;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Photorhabdus Photorhabdus temperata subsp. temperata M1021 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_544916745 hallmark;refseq 33;22;4;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Photorhabdus Photorhabdus temperata subsp. temperata M1021 extrachromosomal linear Cluster_47 Gammaproteobacteria_gi_544943705-0-71741 hallmark;refseq 57;33;16;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 95NR1 prophage linear Cluster_3 Gammaproteobacteria_gi_544943720 hallmark;refseq 22;15;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 95NR1 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_544943727 hallmark;refseq 18;11;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 95NR1 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_544943733 refseq 16;15;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 95NR1 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_544943743 refseq 28;25;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 95NR1 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_544943747 refseq 27;16;10;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 95NR1 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_544943757 refseq 52;45;3;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 95NR1 extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_544943810 hallmark;refseq 38;32;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Punalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 95NR1 extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_544943828 refseq 17;16;1; Viruses;unclassified phages;unknown;unknown;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 95NR1 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_544943872 hallmark 17;4;2;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 95NR1 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_544952661 hallmark;refseq 27;18;6;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xylella Xylella fastidiosa subsp. multiplex Griffin-1 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_544952699 hallmark;refseq 17;14;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xylella Xylella fastidiosa subsp. multiplex Griffin-1 extrachromosomal linear Cluster_298 Gammaproteobacteria_gi_544952705 hallmark 19;7;7;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xylella Xylella fastidiosa subsp. multiplex Griffin-1 extrachromosomal linear Cluster_202 Gammaproteobacteria_gi_544952730 hallmark 22;7;5;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xylella Xylella fastidiosa subsp. multiplex Griffin-1 extrachromosomal linear Cluster_184 Gammaproteobacteria_gi_545071081-0-27011 hallmark 39;14;5;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas sp. EGD-AK9 prophage linear Cluster_249 Gammaproteobacteria_gi_545075108 hallmark;refseq 26;14;2;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas sp. EGD-AK9 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_545077902-1370821-1381245 noncaudo 17;10;1;6 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio parahaemolyticus 10290 prophage linear Cluster_14 Gammaproteobacteria_gi_545078374-368107-381725 noncaudo 15;8;2;5 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio parahaemolyticus 10290 prophage linear Cluster_130 Gammaproteobacteria_gi_545081111-1043-10544 refseq 14;3;;11 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio parahaemolyticus VP232 prophage linear Cluster_215 Gammaproteobacteria_gi_545081111-11179-20437 refseq 11;8;2;1 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio parahaemolyticus VP232 prophage linear Cluster_14 Gammaproteobacteria_gi_545081878-1452050-1464499 noncaudo 23;4;;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio parahaemolyticus VP250 prophage linear Cluster_215 Gammaproteobacteria_gi_545081878-1464793-1473556 noncaudo 12;10;;2 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio parahaemolyticus VP250 prophage linear Cluster_14 Gammaproteobacteria_gi_545084651-198022-207032 refseq 12;9;;3 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio parahaemolyticus NIHCB0603 prophage linear Cluster_14 Gammaproteobacteria_gi_545084871-1236653-1249102 noncaudo 23;4;;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio parahaemolyticus VP-NY4 prophage linear Cluster_215 Gammaproteobacteria_gi_545084871-1249381-1258159 noncaudo 12;10;;2 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio parahaemolyticus VP-NY4 prophage linear Cluster_14 Gammaproteobacteria_gi_545085857-23602-69210 hallmark;vdb 59;20;16;23 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio coralliilyticus OCN008 prophage linear Cluster_0 Gammaproteobacteria_gi_545091524 hallmark;refseq 66;24;18;24 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Gallibacterium Gallibacterium anatis 12656/12 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_545122446-857592-866602 noncaudo 12;9;;3 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio parahaemolyticus 949 prophage linear Cluster_14 Gammaproteobacteria_gi_545122446-866549-878573 noncaudo 24;4;;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio parahaemolyticus 949 prophage linear Cluster_215 Gammaproteobacteria_gi_545122535-564-8017 hallmark;refseq 12;10;;2 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio parahaemolyticus VPCR-2010 prophage linear Cluster_14 Gammaproteobacteria_gi_545122535-7964-13930 hallmark;refseq 10;8;1;1 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio parahaemolyticus VPCR-2010 prophage linear Cluster_14 Gammaproteobacteria_gi_545128421-166982-177165 hallmark;noncaudo 16;6;2;8 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas mendocina EGD-AQ5 prophage linear Cluster_414 Gammaproteobacteria_gi_545136053 refseq 26;12;9;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 09BKT076207 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_545136067 hallmark;refseq 32;22;9;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 09BKT076207 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_545136087-36326-56967 hallmark;refseq 31;24;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 09BKT076207 prophage linear Cluster_1 Gammaproteobacteria_gi_545136123 hallmark;refseq 16;13;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 09BKT076207 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_545136127 refseq 31;19;12; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 09BKT076207 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_545136171 refseq 15;15;; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 09BKT076207 extrachromosomal linear Cluster_19 Gammaproteobacteria_gi_545136190 hallmark;refseq 31;24;7; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 09BKT076207 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_545136196-482-24151 hallmark;refseq 32;26;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 09BKT076207 prophage linear Cluster_0 Gammaproteobacteria_gi_545136206 hallmark;refseq 16;16;; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 09BKT076207 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_545136220-255674-281473 hallmark;refseq 27;27;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 09BKT076207 prophage linear Cluster_5 Gammaproteobacteria_gi_545136351 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B102 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_545136429 hallmark;refseq 56;24;16;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B102 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_545136465 hallmark;refseq 13;8;3;2 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B102 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_545136504 refseq 14;14;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B102 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_545136508 hallmark;refseq 15;14;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B102 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_545136582-72-26494 hallmark;refseq 29;22;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B107 prophage linear Cluster_4 Gammaproteobacteria_gi_545136598 hallmark;refseq 18;15;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B107 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_545136609-0-33612 hallmark;refseq 35;35;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B107 prophage linear Cluster_5 Gammaproteobacteria_gi_545136634-41187-60743 hallmark;refseq 29;23;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B107 prophage linear Cluster_1 Gammaproteobacteria_gi_545136634-43-31914 hallmark;refseq 35;11;18;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B107 prophage linear Cluster_33 Gammaproteobacteria_gi_545136641 refseq;vdb 23;11;10;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B107 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_545136647 hallmark;refseq 18;15;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B107 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_545136653 refseq 15;11;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B107 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_545136682 hallmark;refseq 22;16;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B107 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_545136700 refseq 21;19;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B107 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_545136710 hallmark;refseq 15;13;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B107 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_545136726 refseq 31;28;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B107 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_545136762 hallmark;refseq 22;18;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B26-1 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_545136780 hallmark;refseq 13;11;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B26-1 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_545136805 hallmark;refseq 22;17;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B26-1 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_545136824 hallmark;refseq 26;21;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B26-1 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_545136832 hallmark;refseq 20;18;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B26-1 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_545136846 refseq 27;16;11; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B26-1 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_545136879 refseq 23;20;3; Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B26-1 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_545136892 hallmark;refseq 29;23;6; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B26-1 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_545136900 hallmark;refseq 27;27;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B26-1 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_545136906 refseq 20;17;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B26-1 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_545136957 hallmark;refseq 38;22;11;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B26-2 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_545136963 hallmark;refseq 22;17;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B26-2 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_545136980-0-35568 hallmark;refseq 37;37;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B26-2 prophage linear Cluster_5 Gammaproteobacteria_gi_545137000 hallmark;refseq 34;24;6;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B26-2 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_545137049 hallmark;refseq 30;25;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B26-2 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_545137056 refseq 19;9;5;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B26-2 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_545137088 refseq 18;15;3; Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B26-2 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_545137095 hallmark;refseq 13;9;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B26-2 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_545137100 refseq 36;33;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B26-2 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_545137198 refseq 27;26;1; Viruses;unclassified phages;unknown;unknown;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B28-1 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_545137199 hallmark;refseq 21;18;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B28-1 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_545137276 hallmark;refseq 15;9;4;2 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B28-1 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_545137305-39744-51483 hallmark;refseq;vdb 11;7;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B28-1 prophage linear Cluster_0 Gammaproteobacteria_gi_545137307-812-24481 hallmark;refseq 32;26;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B28-1 prophage linear Cluster_0 Gammaproteobacteria_gi_545137418 refseq 28;26;2; Viruses;unclassified phages;unknown;unknown;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B29-1 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_545137420 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B29-1 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_545137460 hallmark;vdb 20;5;11;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B29-1 extrachromosomal linear Cluster_33 Gammaproteobacteria_gi_545137464 hallmark;refseq 17;15;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B29-1 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_545137505 hallmark;refseq 15;9;4;2 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B29-1 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_545137528-10852-20996 hallmark;refseq 10;7;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B29-1 prophage linear Cluster_0 Gammaproteobacteria_gi_545137531-775-24444 hallmark;refseq 32;26;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B29-1 prophage linear Cluster_0 Gammaproteobacteria_gi_545137544 hallmark;refseq 11;11;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B29-1 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_545137637 hallmark;refseq 21;16;5; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B29-2 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_545137683 hallmark;refseq 16;14;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B29-2 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_545137746-39660-51399 hallmark;refseq;vdb 11;7;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B29-2 prophage linear Cluster_0 Gammaproteobacteria_gi_545137748-0-22639 hallmark;refseq 31;25;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B29-2 prophage linear Cluster_0 Gammaproteobacteria_gi_545137751 refseq 26;25;1; Viruses;unclassified phages;unknown;unknown;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B29-2 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_545137760 hallmark;refseq 12;12;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B29-2 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_545137831 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B36-1 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_545137863 hallmark;vdb 20;5;11;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B36-1 extrachromosomal linear Cluster_33 Gammaproteobacteria_gi_545137867 hallmark;refseq 16;14;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B36-1 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_545137915-10849-20951 hallmark;refseq 10;7;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B36-1 prophage linear Cluster_0 Gammaproteobacteria_gi_545137916-790-24459 hallmark;refseq 32;26;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B36-1 prophage linear Cluster_0 Gammaproteobacteria_gi_545137941 refseq 28;25;3; Viruses;unclassified phages;unknown;unknown;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B36-1 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_545138077 hallmark;refseq 21;16;5; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B36-2 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_545138111 hallmark;vdb 20;5;11;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B36-2 extrachromosomal linear Cluster_33 Gammaproteobacteria_gi_545138117 hallmark;refseq 16;14;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B36-2 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_545138173-39736-51469 hallmark;refseq;vdb 11;7;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B36-2 prophage linear Cluster_0 Gammaproteobacteria_gi_545138175-776-24445 hallmark;refseq 32;26;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B36-2 prophage linear Cluster_0 Gammaproteobacteria_gi_545138199 refseq 27;25;2; Viruses;unclassified phages;unknown;unknown;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B36-2 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_545138279 hallmark;refseq 18;15;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B7-1 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_545138294 hallmark;refseq 28;24;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B7-1 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_545138319 hallmark;refseq 26;19;7; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B7-1 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_545138335 refseq 39;24;14;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B7-1 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_545138344 refseq 12;7;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B7-1 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_545138369 refseq 9;6;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B7-1 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_545138374-104151-135652 hallmark;refseq 41;33;6;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B7-1 prophage linear Cluster_0 Gammaproteobacteria_gi_545138430-584311-611275 hallmark;refseq 33;25;7;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B7-2 prophage linear Cluster_2 Gammaproteobacteria_gi_545138439 hallmark;refseq 18;13;5; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B7-2 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_545138457 refseq 9;6;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B7-2 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_545138466 hallmark;refseq 19;17;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B7-2 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_545138472-7414-27389 hallmark;refseq 29;24;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B7-2 prophage linear Cluster_1 Gammaproteobacteria_gi_545138520-165073-196574 hallmark;refseq 41;34;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B7-2 prophage linear Cluster_0 Gammaproteobacteria_gi_545138605 refseq 31;14;10;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B93 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_545138633 hallmark;refseq 21;19;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B93 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_545138652 hallmark;refseq 15;13;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B93 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_545138659 hallmark;refseq 35;19;7;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B93 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_545138676 refseq 32;21;11; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B93 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_545138709 hallmark;refseq 24;18;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B93 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_545138727 hallmark;refseq 20;17;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B93 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_545138736-131255-162754 hallmark;refseq 42;35;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B93 prophage linear Cluster_0 Gammaproteobacteria_gi_545138743-271778-302738 hallmark;refseq 31;31;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B93 prophage linear Cluster_5 Gammaproteobacteria_gi_545138824-83123-113432 hallmark;refseq 35;27;7;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B94 prophage linear Cluster_2 Gammaproteobacteria_gi_545138834 hallmark;refseq 18;15;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B94 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_545138850-7642-31040 hallmark 33;8;17;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B94 prophage linear Cluster_33 Gammaproteobacteria_gi_545138851-0-21930 hallmark;refseq 23;19;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B94 prophage linear Cluster_1 Gammaproteobacteria_gi_545138857 refseq 25;12;11;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B94 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_545138872 hallmark;refseq 26;23;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B94 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_545138877 refseq 13;7;6; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B94 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_545138878 hallmark 29;13;7;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B94 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_545138888 refseq 27;17;10; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B94 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_545138891 refseq 10;7;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B94 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_545138896 hallmark;refseq 26;22;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B94 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_545138922-340-23287 hallmark;refseq 31;25;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B94 prophage linear Cluster_0 Gammaproteobacteria_gi_545138936-271797-306277 hallmark;refseq 36;36;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B94 prophage linear Cluster_5 Gammaproteobacteria_gi_545139002 hallmark;refseq 13;10;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B95 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_545139011 refseq 20;16;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B95 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_545139022 hallmark;refseq 20;18;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B95 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_545139037 hallmark;refseq 16;12;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B95 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_545139054 refseq 16;10;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B95 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_545139095 hallmark;refseq 29;23;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B95 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_545139100 refseq 24;23;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B95 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_545139108-93611-125112 hallmark;refseq 42;34;6;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B95 prophage linear Cluster_0 Gammaproteobacteria_gi_545139127-255021-290257 hallmark;refseq 38;38;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B95 prophage linear Cluster_5 Gammaproteobacteria_gi_545139130 hallmark;refseq 26;21;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B95 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_545139348 hallmark;refseq 30;19;9;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW07509 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_545139453 hallmark;refseq 11;7;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW07509 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_545139559-450788-488660 hallmark;refseq 53;46;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli TW07509 prophage linear Cluster_11 Gammaproteobacteria_gi_545139928 hallmark;refseq 19;17;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 08BKT055439 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_545140086 refseq 19;18;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 08BKT055439 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_545140152 hallmark;refseq 48;23;12;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 08BKT055439 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_545140168 refseq 20;16;1;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 08BKT055439 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_545140407 hallmark;refseq 15;9;3;3 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 08BKT77219 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_545140442 hallmark;refseq 27;25;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 08BKT77219 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_545140564 refseq 18;14;1;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 08BKT77219 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_545140728 hallmark;refseq 15;12;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 09BKT024447 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_545140779 hallmark 15;6;5;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 09BKT024447 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_545140889 refseq 20;19;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 09BKT024447 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_545140902-40690-52428 hallmark;refseq;vdb 11;7;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 09BKT024447 prophage linear Cluster_0 Gammaproteobacteria_gi_545140914 hallmark;refseq 20;16;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 09BKT024447 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_545141139 hallmark;refseq 12;10;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli Bd5610_99 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_545141233 hallmark;refseq 14;11;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli Bd5610_99 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_545141337 refseq 17;16;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli Bd5610_99 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_545141353 hallmark;refseq 29;26;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli Bd5610_99 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_545141386 refseq 17;16;1; Viruses;unclassified phages;unknown;unknown;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli Bd5610_99 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_545141615 hallmark;refseq 21;18;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli T1282_01 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_545141782 hallmark;refseq 31;26;5; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli T1282_01 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_545141967 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli T1840_97 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_545142091-0-23628 hallmark;refseq 33;26;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli T1840_97 prophage linear Cluster_0 Gammaproteobacteria_gi_545142282 hallmark;refseq 14;13;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli T234_00 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_545142331 hallmark;refseq 14;8;3;3 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli T234_00 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_545142365-575-22213 hallmark;refseq 30;26;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli T234_00 prophage linear Cluster_0 Gammaproteobacteria_gi_545142398 refseq 18;15;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli T234_00 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_545142611 hallmark;refseq 14;13;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli T924_01 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_545142693 refseq 21;20;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli T924_01 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_545142702 hallmark;refseq 14;11;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli T924_01 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_545142866-156753-177922 hallmark;refseq 30;25;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 14A prophage linear Cluster_0 Gammaproteobacteria_gi_545142876 hallmark;refseq 17;17;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 14A extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_545142912 hallmark 18;6;7;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 14A extrachromosomal linear Cluster_33 Gammaproteobacteria_gi_545142923 hallmark;refseq 17;15;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 14A extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_545142939 refseq 14;9;5; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 14A extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_545142993 hallmark;refseq 13;8;3;2 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 14A extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_545143036 hallmark;refseq 11;11;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 14A extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_545143135 hallmark;refseq 23;19;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2886-75 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_545143176 hallmark;refseq 16;14;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2886-75 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_545143254 refseq 15;15;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2886-75 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_545143258 hallmark;refseq 12;12;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 2886-75 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_545143384-13820-39643 hallmark;vdb 32;9;17;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B103 prophage linear Cluster_33 Gammaproteobacteria_gi_545143388 hallmark;refseq 15;14;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B103 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_545143473 refseq 16;15;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B103 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_545143475 hallmark;refseq 10;10;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B103 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_545143560 hallmark;refseq 20;16;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B104 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_545143617 hallmark;refseq 15;14;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B104 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_545143680 refseq 15;15;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B104 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_545143682 hallmark;refseq 10;10;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B104 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_545143776 hallmark;refseq 20;16;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B105 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_545143815-13963-39848 hallmark 33;9;17;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B105 prophage linear Cluster_33 Gammaproteobacteria_gi_545143817 hallmark;refseq 15;14;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B105 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_545143898 refseq 17;15;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B105 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_545143899 hallmark;refseq 11;11;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B105 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_545143972 hallmark;refseq 19;16;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B106 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_545144013-13915-39738 hallmark 33;9;17;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B106 prophage linear Cluster_33 Gammaproteobacteria_gi_545144088 refseq 15;15;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B106 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_545144090 hallmark;refseq 24;19;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B106 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_545144191 hallmark;refseq 20;16;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B108 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_545144273 hallmark;refseq 14;9;3;2 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B108 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_545144303 refseq 14;14;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B108 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_545144306 hallmark;refseq 11;11;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B108 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_545144376 hallmark;refseq 20;16;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B109 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_545144461 hallmark;refseq 13;8;3;2 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B109 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_545144480 refseq 22;21;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B109 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_545144495 refseq 14;14;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B109 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_545144497 hallmark;refseq 12;12;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B109 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_545144584 hallmark;refseq 23;19;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B112 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_545144626 hallmark;refseq 14;13;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B112 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_545144664 hallmark;refseq 13;8;3;2 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B112 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_545144691-40992-52725 hallmark;refseq;vdb 11;7;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B112 prophage linear Cluster_0 Gammaproteobacteria_gi_545144692-483-23430 hallmark;refseq 31;25;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B112 prophage linear Cluster_0 Gammaproteobacteria_gi_545144709 refseq 26;25;1; Viruses;unclassified phages;unknown;unknown;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B112 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_545144786 hallmark;refseq 20;16;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B113 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_545144820 hallmark;refseq 16;14;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B113 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_545144888-847-24429 hallmark;refseq 32;26;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B113 prophage linear Cluster_0 Gammaproteobacteria_gi_545144906 refseq 25;24;1; Viruses;unclassified phages;unknown;unknown;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B113 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_545145032 hallmark;refseq 17;15;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B114 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_545145052 hallmark;refseq 15;12;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B114 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_545145074 hallmark;refseq 13;8;3;2 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B114 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_545145102-15340-21188 hallmark;refseq 6;6;; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B114 prophage linear Cluster_0 Gammaproteobacteria_gi_545145103-867-24536 hallmark;refseq 32;26;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B114 prophage linear Cluster_0 Gammaproteobacteria_gi_545145106 refseq 26;25;1; Viruses;unclassified phages;unknown;unknown;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B114 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_545145194 hallmark;refseq 20;16;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B15 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_545145242 hallmark;refseq 17;15;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B15 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_545145262-2955-17357 hallmark;refseq 15;10;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B15 prophage linear Cluster_3 Gammaproteobacteria_gi_545145326 refseq 15;15;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B15 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_545145330 hallmark;refseq 11;11;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B15 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_545145440 hallmark;refseq 20;16;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B17 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_545145470-13913-39736 hallmark;vdb 32;9;17;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B17 prophage linear Cluster_33 Gammaproteobacteria_gi_545145472 hallmark;refseq 24;19;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B17 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_545145474 hallmark;refseq 15;14;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B17 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_545145520 hallmark;refseq 13;8;3;2 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B17 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_545145552 refseq 14;14;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B17 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_545145606-868-15269 hallmark;refseq 15;10;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B40-1 prophage linear Cluster_3 Gammaproteobacteria_gi_545145677 hallmark;refseq 17;16;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B40-1 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_545145724 hallmark;refseq 13;8;3;2 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B40-1 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_545145760 refseq 15;15;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B40-1 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_545145763 hallmark;refseq 12;12;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B40-1 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_545145842 hallmark;refseq 20;16;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B40-2 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_545145885 hallmark;refseq 20;18;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B40-2 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_545145924 hallmark;refseq 13;8;3;2 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B40-2 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_545145954 refseq 14;14;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B40-2 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_545145957 hallmark;refseq 11;11;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B40-2 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_545146015-893-15294 hallmark;refseq 15;10;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B40-2 prophage linear Cluster_3 Gammaproteobacteria_gi_545146057 hallmark;refseq 20;16;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B49-2 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_545146106-8040-33922 hallmark 33;9;17;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B49-2 prophage linear Cluster_33 Gammaproteobacteria_gi_545146195 refseq 16;16;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B49-2 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_545146198 hallmark;refseq;vdb 18;16;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B49-2 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_545146278 hallmark;refseq 20;16;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B5-2 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_545146374 hallmark;refseq 55;24;16;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B5-2 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_545146394 refseq 15;15;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B5-2 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_545146396 hallmark;refseq 10;10;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B5-2 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_545146476 hallmark;refseq 20;16;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B83 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_545146520 hallmark;refseq 15;14;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B83 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_545146557 hallmark;refseq 13;8;3;2 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B83 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_545146590 refseq 15;15;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B83 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_545146592 hallmark;refseq 10;10;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B83 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_545146744 hallmark;refseq 15;14;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B84 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_545146788 hallmark;refseq 13;8;3;2 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B84 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_545146839 refseq 14;14;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B84 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_545146842 hallmark;refseq 11;11;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B84 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_545146911 hallmark;refseq 20;16;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B85 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_545146950 hallmark;refseq 24;19;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B85 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_545146951 hallmark;refseq 17;15;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B85 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_545146996 hallmark;refseq 14;8;4;2 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B85 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_545147037 refseq 15;15;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B85 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_545147142 hallmark;refseq 23;19;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B86 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_545147183 hallmark;refseq 17;15;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B86 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_545147270 refseq 15;15;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B86 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_545147273 hallmark;refseq 11;11;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B86 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_545147351 hallmark;refseq 16;12;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B89 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_545147394 hallmark;refseq 15;14;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B89 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_545147479-764-24433 hallmark;refseq 32;26;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B89 prophage linear Cluster_0 Gammaproteobacteria_gi_545147481 refseq 26;25;1; Viruses;unclassified phages;unknown;unknown;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B89 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_545147628 hallmark;refseq 21;17;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B90 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_545147660 hallmark;refseq 17;15;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B90 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_545147704 hallmark;refseq 13;8;3;2 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B90 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_545147726-15825-22078 hallmark;refseq 6;5;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B90 prophage linear Cluster_0 Gammaproteobacteria_gi_545147728-798-24467 hallmark;refseq 32;26;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B90 prophage linear Cluster_0 Gammaproteobacteria_gi_545147730 refseq 26;25;1; Viruses;unclassified phages;unknown;unknown;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B90 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_545147906 hallmark;refseq 20;18;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli Tx1686 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_545147977-44385-75069 hallmark;refseq 45;38;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli Tx1686 prophage linear Cluster_0 Gammaproteobacteria_gi_545148102 hallmark;refseq 20;17;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli Tx3800 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_545148152 hallmark;refseq 15;14;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli Tx3800 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_545148227-15340-21188 hallmark;refseq 6;6;; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli Tx3800 prophage linear Cluster_0 Gammaproteobacteria_gi_545148230-755-24424 hallmark;refseq 32;26;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli Tx3800 prophage linear Cluster_0 Gammaproteobacteria_gi_545148718-60860-89870 hallmark;refseq 38;30;6;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Serratia Serratia marcescens EGD-HP20 prophage linear Cluster_0 Gammaproteobacteria_gi_545156748-572790-611177 hallmark;refseq 55;50;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 2 (4-6943160) prophage linear Cluster_11 Gammaproteobacteria_gi_545157141 refseq 22;19;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 3 (4-7276001) extrachromosomal linear Cluster_261 Gammaproteobacteria_gi_545157487-171610-202200 hallmark;refseq 41;34;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 3 (4-7276001) prophage linear Cluster_0 Gammaproteobacteria_gi_545157523-277410-322566 hallmark;refseq;vdb 57;36;15;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 3 (4-7276001) prophage linear Cluster_2 Gammaproteobacteria_gi_545157677-29201-75721 hallmark;refseq 53;38;11;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 4 (4-7276109) prophage linear Cluster_2 Gammaproteobacteria_gi_545157788-2161257-2196623 hallmark;refseq 42;34;7;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 5 (4-7148410) prophage linear Cluster_0 Gammaproteobacteria_gi_545157817-474-32159 hallmark;refseq 40;32;7;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 5 (4-7148410) prophage linear Cluster_2 Gammaproteobacteria_gi_545158202-2061885-2105095 hallmark;refseq 58;53;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 6 (3-8296502) prophage linear Cluster_7 Gammaproteobacteria_gi_545158274-54932-91994 hallmark;refseq 53;46;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 6 (3-8296502) prophage linear Cluster_3 Gammaproteobacteria_gi_545159081 noncaudo 13;3;2;8 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 13 (4-7634056) extrachromosomal circular Cluster_51 Gammaproteobacteria_gi_545159155-94242-135479 hallmark;refseq 60;55;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 13 (4-7634056) prophage linear Cluster_11 Gammaproteobacteria_gi_545159208 hallmark;refseq 15;9;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 13 (4-7634056) extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_545159264 hallmark;refseq 18;10;4;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 16 (4-7649002) extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_545159317-724625-782156 hallmark;refseq;vdb 66;38;17;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 16 (4-7649002) prophage linear Cluster_1 Gammaproteobacteria_gi_545159398 hallmark;refseq 58;28;15;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 17 (4-7473087) extrachromosomal circular Cluster_0 Gammaproteobacteria_gi_545159413-708727-741737 hallmark;refseq 39;33;6; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 17 (4-7473087) prophage linear Cluster_0 Gammaproteobacteria_gi_545159467-1488260-1526964 hallmark;refseq 53;47;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 17 (4-7473087) prophage linear Cluster_7 Gammaproteobacteria_gi_545159467-236464-284087 hallmark;refseq 53;31;13;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 17 (4-7473087) prophage linear Cluster_26 Gammaproteobacteria_gi_545160214-744505-786080 hallmark;refseq 55;51;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 19 (4-7154984) prophage linear Cluster_7 Gammaproteobacteria_gi_545162004-245184-282804 hallmark;refseq 56;47;4;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 25 (4-5851939) prophage linear Cluster_3 Gammaproteobacteria_gi_545162041 hallmark;refseq 104;42;3;59 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 25 (4-5851939) extrachromosomal linear Cluster_23 Gammaproteobacteria_gi_545162132-426960-453002 hallmark;refseq 37;33;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 25 (4-5851939) prophage linear Cluster_1 Gammaproteobacteria_gi_545162157-105261-142734 hallmark;refseq 51;38;8;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 25 (4-5851939) prophage linear Cluster_4 Gammaproteobacteria_gi_545162437-210890-245154 hallmark;refseq 42;34;5;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 25 (4-5851939) prophage linear Cluster_0 Gammaproteobacteria_gi_545162641-54-44250 hallmark;refseq 62;45;8;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 26 (4-5703913) prophage linear Cluster_4 Gammaproteobacteria_gi_545162647 hallmark;refseq 24;21;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 26 (4-5703913) extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_545162841-429094-462988 hallmark;refseq 37;30;3;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 26 (4-5703913) prophage linear Cluster_0 Gammaproteobacteria_gi_545162841-727110-769302 hallmark;refseq 57;50;3;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 26 (4-5703913) prophage linear Cluster_7 Gammaproteobacteria_gi_545163253-1742652-1782470 hallmark;refseq 61;52;5;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 28 (4-0907367) prophage linear Cluster_11 Gammaproteobacteria_gi_545163322-151527-190379 hallmark;refseq 50;40;4;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 28 (4-0907367) prophage linear Cluster_2 Gammaproteobacteria_gi_545163352-961189-1037846 hallmark;refseq 99;60;32;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 29 (4-3418073) prophage linear Cluster_1 Gammaproteobacteria_gi_545163399 hallmark;refseq 48;43;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 29 (4-3418073) extrachromosomal circular Cluster_7 Gammaproteobacteria_gi_545163475-1428-35314 hallmark;refseq;vdb 39;29;7;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 30 (4-2661829) prophage linear Cluster_1 Gammaproteobacteria_gi_545163776-145602-187350 hallmark;refseq 55;49;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 32 (4-3773988) prophage linear Cluster_7 Gammaproteobacteria_gi_545163810-810409-855867 hallmark;refseq;vdb 60;36;17;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 32 (4-3773988) prophage linear Cluster_2 Gammaproteobacteria_gi_545163880-581775-626666 hallmark;refseq 68;47;10;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 33 (4-2174936) prophage linear Cluster_1 Gammaproteobacteria_gi_545164069-2197125-2236772 hallmark;refseq 53;47;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 33 (4-2174936) prophage linear Cluster_7 Gammaproteobacteria_gi_545164127-0-16327 hallmark;refseq;vdb 15;12;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 33 (4-2174936) prophage linear Cluster_1 Gammaproteobacteria_gi_545164357-0-31906 hallmark;refseq 50;28;15;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 37 (4-2773848) prophage linear Cluster_1 Gammaproteobacteria_gi_545164365-522146-565177 hallmark;refseq 57;48;4;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 37 (4-2773848) prophage linear Cluster_7 Gammaproteobacteria_gi_545164454-376329-401202 hallmark;refseq 35;30;5; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 38 (4-2774682) prophage linear Cluster_1 Gammaproteobacteria_gi_545164555-306776-342788 hallmark;refseq 38;24;11;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 38 (4-2774682) prophage linear Cluster_1 Gammaproteobacteria_gi_545164929-525586-568616 hallmark;refseq 58;49;4;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 40 (4-1219782) prophage linear Cluster_7 Gammaproteobacteria_gi_545164943-0-39693 hallmark;refseq 53;29;16;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 40 (4-1219782) prophage linear Cluster_1 Gammaproteobacteria_gi_545165011 refseq 9;6;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 41 (4-2677849) extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_545165330-100425-158034 hallmark;refseq;vdb 50;31;15;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 42 (4-2100061) prophage linear Cluster_4 Gammaproteobacteria_gi_545165330-391270-422440 hallmark;refseq 40;35;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 42 (4-2100061) prophage linear Cluster_0 Gammaproteobacteria_gi_545165330-877422-917415 hallmark;refseq 55;48;2;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 42 (4-2100061) prophage linear Cluster_7 Gammaproteobacteria_gi_545165525-16525-108807 hallmark;refseq 100;81;9;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 43 (4-2173468) prophage linear Cluster_9 Gammaproteobacteria_gi_545165752-1037311-1066549 hallmark;refseq 37;32;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 45 (4-3129918) prophage linear Cluster_0 Gammaproteobacteria_gi_545165932 hallmark;refseq 120;96;9;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 46 (4-2758776) extrachromosomal circular Cluster_9 Gammaproteobacteria_gi_545166572-95912-118344 hallmark;refseq 35;27;5;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 46 (4-2758776) prophage linear Cluster_10 Gammaproteobacteria_gi_545167081 hallmark;refseq 21;14;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 53 (4-0631051) extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_545167087 hallmark;refseq 22;14;6;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 53 (4-0631051) extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_545167319-223355-237464 hallmark;refseq 18;15;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 53 (4-0631051) prophage linear Cluster_22 Gammaproteobacteria_gi_545167335 hallmark;refseq 9;5;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 53 (4-0631051) extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_545167831-4901347-4958939 hallmark;refseq;vdb 78;46;23;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 55 (4-2646161) prophage linear Cluster_1 Gammaproteobacteria_gi_545167831-553376-595550 hallmark;refseq 66;52;6;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 55 (4-2646161) prophage linear Cluster_11 Gammaproteobacteria_gi_545167879-1527303-1533524 hallmark;noncaudo 8;5;2;1 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 56 (4-2153033) prophage linear Cluster_36 Gammaproteobacteria_gi_545167914-122516-161368 hallmark;refseq 48;38;4;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 56 (4-2153033) prophage linear Cluster_2 Gammaproteobacteria_gi_545168008-848425-894302 hallmark;refseq 57;40;12;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 58 (4-2839709) prophage linear Cluster_1 Gammaproteobacteria_gi_545168086-856-17284 hallmark;refseq 20;19;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 59 (4-1119338) prophage linear Cluster_0 Gammaproteobacteria_gi_545168118-129572-162831 hallmark;refseq 43;30;11;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 59 (4-1119338) prophage linear Cluster_2 Gammaproteobacteria_gi_545168278-169424-185340 hallmark;refseq 20;19;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 59 (4-1119338) prophage linear Cluster_0 Gammaproteobacteria_gi_545168321-300575-348840 hallmark;refseq 57;42;7;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 59 (4-1119338) prophage linear Cluster_19 Gammaproteobacteria_gi_545168321-47-12732 hallmark;refseq 17;14;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 59 (4-1119338) prophage linear Cluster_0 Gammaproteobacteria_gi_545168383-174976-185639 hallmark;refseq 14;13;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 59 (4-1119338) prophage linear Cluster_0 Gammaproteobacteria_gi_545168480-1110311-1187690 hallmark;refseq 100;60;32;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 63 (4-2542528) prophage linear Cluster_1 Gammaproteobacteria_gi_545168859-1402578-1444542 hallmark;refseq 55;49;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 65 (4-2262045) prophage linear Cluster_7 Gammaproteobacteria_gi_545168859-321833-342987 hallmark;refseq 23;20;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 65 (4-2262045) prophage linear Cluster_1 Gammaproteobacteria_gi_545168859-918320-950215 hallmark;refseq 41;37;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 65 (4-2262045) prophage linear Cluster_0 Gammaproteobacteria_gi_545168911 hallmark;refseq 15;11;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 68 (4-0888028) extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_545168928-933832-978020 hallmark;refseq 57;31;16;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 68 (4-0888028) prophage linear Cluster_1 Gammaproteobacteria_gi_545169017-68574-99983 hallmark;refseq 41;36;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 69 (4-2837072) prophage linear Cluster_0 Gammaproteobacteria_gi_545169023-415236-441599 hallmark;refseq 37;30;3;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 69 (4-2837072) prophage linear Cluster_1 Gammaproteobacteria_gi_545169252 hallmark;refseq 67;32;15;20 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 70 (4-2963531) extrachromosomal circular Cluster_48 Gammaproteobacteria_gi_545170003-423430-463678 hallmark;refseq 51;48;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 70 (4-2963531) prophage linear Cluster_7 Gammaproteobacteria_gi_545170241 hallmark;refseq 33;25;7;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 73 (4-2393174) extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_545170337-1678655-1711435 hallmark;refseq 39;33;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 73 (4-2393174) prophage linear Cluster_0 Gammaproteobacteria_gi_545170337-2166757-2207721 hallmark;refseq 52;47;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 73 (4-2393174) prophage linear Cluster_7 Gammaproteobacteria_gi_545170528-1720269-1762109 hallmark;refseq 55;47;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 74 (4-1034782) prophage linear Cluster_7 Gammaproteobacteria_gi_545171221 hallmark 15;5;4;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 79 (4-2512823) extrachromosomal linear Cluster_33 Gammaproteobacteria_gi_545171409-0-18261 hallmark;refseq 21;17;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 79 (4-2512823) prophage linear Cluster_1 Gammaproteobacteria_gi_545171533-1043546-1083971 hallmark;refseq 60;46;8;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 80 (4-2428830) prophage linear Cluster_11 Gammaproteobacteria_gi_545171533-876058-916302 hallmark;refseq 51;46;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 80 (4-2428830) prophage linear Cluster_7 Gammaproteobacteria_gi_545171642 refseq 15;13;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 80 (4-2428830) extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_545171898-1172782-1208916 hallmark;refseq 52;51;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 82 (4-2209276) prophage linear Cluster_3 Gammaproteobacteria_gi_545171898-2376468-2425741 hallmark;refseq 56;41;8;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 82 (4-2209276) prophage linear Cluster_1 Gammaproteobacteria_gi_545172109-394464-427548 hallmark;refseq 42;33;5;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 82 (4-2209276) prophage linear Cluster_0 Gammaproteobacteria_gi_545172166-0-27764 hallmark;refseq 41;34;7; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 82 (4-2209276) prophage linear Cluster_1 Gammaproteobacteria_gi_545172212-2080039-2126556 hallmark;refseq 65;30;18;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 84 (4-1021478) prophage linear Cluster_0 Gammaproteobacteria_gi_545172326 hallmark;refseq 34;22;9;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 85 (4-0792144) extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_545172887-976433-1052210 hallmark;refseq 100;55;38;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 89 (4-5885604) prophage linear Cluster_1 Gammaproteobacteria_gi_545173045-1150423-1192677 hallmark;refseq 59;28;15;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 90 (4-3191362) prophage linear Cluster_0 Gammaproteobacteria_gi_545173045-1342470-1383753 hallmark;refseq 60;51;5;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 90 (4-3191362) prophage linear Cluster_11 Gammaproteobacteria_gi_545173136-858757-938561 hallmark;refseq 100;56;36;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 95 (4-6074464) prophage linear Cluster_1 Gammaproteobacteria_gi_545173409-2426554-2429837 hallmark;noncaudo 4;4;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 100 (4-2850729) prophage linear Cluster_36 Gammaproteobacteria_gi_545173500-284233-325592 hallmark;refseq 63;27;22;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 100 (4-2850729) prophage linear Cluster_28 Gammaproteobacteria_gi_545173500-995049-1036682 hallmark;refseq 63;54;7;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 100 (4-2850729) prophage linear Cluster_11 Gammaproteobacteria_gi_545173505 hallmark;refseq 12;7;;5 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 100 (4-2850729) extrachromosomal circular Cluster_36 Gammaproteobacteria_gi_545173517-0-30155 hallmark;refseq 39;32;3;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 100 (4-2850729) prophage linear Cluster_2 Gammaproteobacteria_gi_545173524-516771-545510 hallmark;refseq 39;24;13;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 102 (4-6906788) prophage linear Cluster_2 Gammaproteobacteria_gi_545173550-1992383-2027749 hallmark;refseq 42;34;7;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 102 (4-6906788) prophage linear Cluster_0 Gammaproteobacteria_gi_545173559-0-25522 hallmark;refseq 33;26;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 102 (4-6906788) prophage linear Cluster_10 Gammaproteobacteria_gi_545173595 hallmark;refseq 58;41;12;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 103 (4-5904188) extrachromosomal circular Cluster_1 Gammaproteobacteria_gi_545173784-2017695-2050475 hallmark;refseq 39;33;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 104 (4-6977960) prophage linear Cluster_0 Gammaproteobacteria_gi_545173784-2505293-2545641 hallmark;refseq 53;48;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 104 (4-6977960) prophage linear Cluster_7 Gammaproteobacteria_gi_545173848-287044-311864 hallmark;refseq 39;31;6;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 106 (4-6881831) prophage linear Cluster_1 Gammaproteobacteria_gi_545173864-710813-787614 hallmark;refseq 100;59;33;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 106 (4-6881831) prophage linear Cluster_1 Gammaproteobacteria_gi_545174520-0-35769 hallmark;refseq 58;34;17;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 109 (4-6977162) prophage linear Cluster_1 Gammaproteobacteria_gi_545174804-1117898-1194117 hallmark;refseq 100;59;33;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 110 (4-6978754) prophage linear Cluster_1 Gammaproteobacteria_gi_545174804-685735-723198 hallmark;refseq 56;46;6;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 110 (4-6978754) prophage linear Cluster_3 Gammaproteobacteria_gi_545174824-1536356-1566566 hallmark;refseq 40;35;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 110 (4-6978754) prophage linear Cluster_0 Gammaproteobacteria_gi_545175022 hallmark;noncaudo 8;4;;4 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 112 (4-5987253) extrachromosomal linear Cluster_36 Gammaproteobacteria_gi_545175058-1352373-1355740 hallmark;noncaudo 4;4;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 112 (4-5987253) prophage linear Cluster_36 Gammaproteobacteria_gi_545175125-1062928-1103076 hallmark;refseq 54;49;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 112 (4-5987253) prophage linear Cluster_7 Gammaproteobacteria_gi_545184267-549463-590789 hallmark;refseq 58;48;6;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 113 (4-7535473) prophage linear Cluster_7 Gammaproteobacteria_gi_545197720-526549-569580 hallmark;refseq 57;48;4;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 114 (4-7037740) prophage linear Cluster_7 Gammaproteobacteria_gi_545204894 hallmark;refseq 16;14;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 115 (4-4465997) extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_545206154-423522-436569 hallmark;refseq 16;12;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 115 (4-4465997) prophage linear Cluster_0 Gammaproteobacteria_gi_545210758-0-12059 hallmark;refseq 15;15;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 115 (4-4465997) prophage linear Cluster_0 Gammaproteobacteria_gi_545213481-290690-335653 hallmark;refseq;vdb 56;29;20;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 115 (4-4465997) prophage linear Cluster_1 Gammaproteobacteria_gi_545214986-0-14321 hallmark;refseq 18;15;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 115 (4-4465989) prophage linear Cluster_0 Gammaproteobacteria_gi_545214986-568943-607717 hallmark;refseq;vdb 49;29;16;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 115 (4-4465989) prophage linear Cluster_1 Gammaproteobacteria_gi_545215820-2011-19519 hallmark;refseq 23;20;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 115 (4-4465989) prophage linear Cluster_0 Gammaproteobacteria_gi_545230507-713399-757800 hallmark;refseq;vdb 58;46;7;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 119 (4-6879578) prophage linear Cluster_1 Gammaproteobacteria_gi_545230705-573303-594197 hallmark;refseq 29;24;5; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 121 (4-6877826) prophage linear Cluster_1 Gammaproteobacteria_gi_545230987-392289-425608 hallmark;refseq 42;32;4;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 121 (4-6877826) prophage linear Cluster_0 Gammaproteobacteria_gi_545231195-477171-524713 hallmark;refseq;vdb 58;36;17;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 121 (4-6877826) prophage linear Cluster_2 Gammaproteobacteria_gi_545231216-1305000-1381657 hallmark;refseq 100;61;31;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 122 (4-6851606) prophage linear Cluster_1 Gammaproteobacteria_gi_545231234-66192-96272 hallmark;refseq 43;36;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 122 (4-6851606) prophage linear Cluster_0 Gammaproteobacteria_gi_545231246-318-31189 hallmark;refseq 45;34;9;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 122 (4-6851606) prophage linear Cluster_4 Gammaproteobacteria_gi_545231246-749479-793409 hallmark;refseq 62;53;5;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 122 (4-6851606) prophage linear Cluster_7 Gammaproteobacteria_gi_545232298-2181520-2212692 hallmark;refseq 39;34;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 126 (4-6034225) prophage linear Cluster_0 Gammaproteobacteria_gi_545232298-2667990-2709426 hallmark;refseq 58;49;4;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 126 (4-6034225) prophage linear Cluster_7 Gammaproteobacteria_gi_545232409-560980-618788 hallmark;refseq 41;30;9;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 127 (4-7303629) prophage linear Cluster_1 Gammaproteobacteria_gi_545232424 refseq 12;7;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 127 (4-7303629) extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_545232615-1330166-1371751 hallmark;refseq 54;49;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 127 (4-7303629) prophage linear Cluster_7 Gammaproteobacteria_gi_545232615-3175131-3217045 hallmark;refseq 32;23;4;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 127 (4-7303629) prophage linear Cluster_1 Gammaproteobacteria_gi_545232788-67127-100294 hallmark;refseq 40;34;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 130 (4-7036876) prophage linear Cluster_0 Gammaproteobacteria_gi_545232899-0-24231 hallmark;refseq 38;26;8;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 130 (4-7036876) prophage linear Cluster_10 Gammaproteobacteria_gi_545232945-16748-48793 hallmark;refseq 44;35;6;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 130 (4-7036876) prophage linear Cluster_0 Gammaproteobacteria_gi_545233032-1396717-1439567 hallmark;refseq 61;48;9;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 133 (4-4466519) prophage linear Cluster_7 Gammaproteobacteria_gi_545233040-644787-678966 hallmark;refseq 49;40;6;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 133 (4-4466519) prophage linear Cluster_1 Gammaproteobacteria_gi_545233099-1587557-1630288 hallmark;refseq 61;51;6;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 134 (4-6073441) prophage linear Cluster_7 Gammaproteobacteria_gi_545233099-3071225-3147790 hallmark;refseq 100;60;32;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 134 (4-6073441) prophage linear Cluster_1 Gammaproteobacteria_gi_545233144-2323045-2355829 hallmark;refseq 39;33;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 135 (4-4449320) prophage linear Cluster_0 Gammaproteobacteria_gi_545233754 refseq 87;69;8;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 139 (4-3192644) extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_545233780-24824-57508 hallmark;refseq 50;44;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 139 (4-3192644) prophage linear Cluster_3 Gammaproteobacteria_gi_545233790 hallmark;refseq 19;13;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 139 (4-3192644) extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_545233846 hallmark;refseq 37;30;3;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 139 (4-3192644) extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_545233899 hallmark;refseq 42;35;2;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 139 (4-3192644) extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_545233983-555-14221 hallmark;refseq 15;13;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 139 (4-3192644) prophage linear Cluster_2 Gammaproteobacteria_gi_545234012-1337880-1414537 hallmark;refseq 100;60;32;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 140 (4-5894387) prophage linear Cluster_1 Gammaproteobacteria_gi_545234041-102586-133213 hallmark;refseq 39;34;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 140 (4-5894387) prophage linear Cluster_0 Gammaproteobacteria_gi_545234068-248629-281639 hallmark;refseq 39;33;6; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 141 (4-5995973) prophage linear Cluster_0 Gammaproteobacteria_gi_545234090-1541557-1580261 hallmark;refseq 53;47;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 141 (4-5995973) prophage linear Cluster_7 Gammaproteobacteria_gi_545234090-253097-297566 hallmark;refseq 51;31;12;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 141 (4-5995973) prophage linear Cluster_26 Gammaproteobacteria_gi_545234090-807221-849475 hallmark;refseq 59;28;15;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 141 (4-5995973) prophage linear Cluster_0 Gammaproteobacteria_gi_545234090-870902-911170 hallmark;refseq 64;51;5;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 141 (4-5995973) prophage linear Cluster_11 Gammaproteobacteria_gi_545234115-737038-786629 hallmark;refseq;vdb 60;45;7;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 141 (4-5995973) prophage linear Cluster_1 Gammaproteobacteria_gi_545234203 hallmark;refseq 63;31;20;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 142 (4-5627451) extrachromosomal circular Cluster_1 Gammaproteobacteria_gi_545234404-153996-201419 hallmark;refseq;vdb 60;42;16;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 143 (4-5674999) prophage linear Cluster_1 Gammaproteobacteria_gi_545234415 refseq 13;7;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 143 (4-5674999) extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_545234557-2261685-2292028 hallmark;refseq 40;35;5; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 145 (4-5672112) prophage linear Cluster_0 Gammaproteobacteria_gi_545234568-0-21153 hallmark;refseq 29;26;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 146 (4-3189767) prophage linear Cluster_0 Gammaproteobacteria_gi_545234621-1110065-1152319 hallmark;refseq 59;28;15;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 146 (4-3189767) prophage linear Cluster_0 Gammaproteobacteria_gi_545234621-1802818-1842829 hallmark;refseq 54;46;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 146 (4-3189767) prophage linear Cluster_7 Gammaproteobacteria_gi_545234621-514191-563183 hallmark;refseq 52;31;12;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 146 (4-3189767) prophage linear Cluster_26 Gammaproteobacteria_gi_545234621-664109-703179 hallmark;refseq 63;53;4;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 146 (4-3189767) prophage linear Cluster_11 Gammaproteobacteria_gi_545234697-1146088-1175103 hallmark;refseq 38;34;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 146 (4-3189767) prophage linear Cluster_0 Gammaproteobacteria_gi_545234935-582253-628885 hallmark;refseq 59;35;15;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 147 (4-5893887) prophage linear Cluster_1 Gammaproteobacteria_gi_545235921-1025512-1065669 hallmark;refseq 56;51;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 150 (4-3258106) prophage linear Cluster_7 Gammaproteobacteria_gi_545235946-0-28338 hallmark;refseq 40;30;10; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 151 (4-5755573) prophage linear Cluster_1 Gammaproteobacteria_gi_545235948-69199-99409 hallmark;refseq 40;35;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 151 (4-5755573) prophage linear Cluster_0 Gammaproteobacteria_gi_545236005 refseq 13;7;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 151 (4-5755573) extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_545236079-414361-438750 hallmark;refseq;vdb 26;20;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 153 (3-9344314) prophage linear Cluster_26 Gammaproteobacteria_gi_545236170-66385-97261 hallmark;refseq 39;34;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 153 (3-9344314) prophage linear Cluster_0 Gammaproteobacteria_gi_545236269 hallmark;refseq 58;28;15;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 154 (4-5636698) extrachromosomal circular Cluster_0 Gammaproteobacteria_gi_545236289 hallmark;refseq 14;9;5; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 154 (4-5636698) extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_545236342-518138-547168 hallmark;refseq 36;31;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 154 (4-5636698) prophage linear Cluster_11 Gammaproteobacteria_gi_545236384-1111621-1193003 hallmark;refseq 100;61;32;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 155 (4-4509048) prophage linear Cluster_1 Gammaproteobacteria_gi_545237160 hallmark;refseq 33;21;4;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 162 (4-5627982) extrachromosomal linear Cluster_21 Gammaproteobacteria_gi_545237221 hallmark;refseq 55;47;4;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 162 (4-5627982) extrachromosomal circular Cluster_7 Gammaproteobacteria_gi_545237669-3279486-3356754 hallmark;refseq 100;59;32;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 163 (4-4697553) prophage linear Cluster_1 Gammaproteobacteria_gi_545237669-4004324-4048697 hallmark;refseq;vdb 57;45;7;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 163 (4-4697553) prophage linear Cluster_1 Gammaproteobacteria_gi_545238065-1301834-1377676 hallmark;refseq 100;59;32;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 167 (4-6073565) prophage linear Cluster_1 Gammaproteobacteria_gi_545238065-2840381-2883112 hallmark;refseq 61;51;6;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 167 (4-6073565) prophage linear Cluster_7 Gammaproteobacteria_gi_545238120-815960-891955 hallmark;refseq 100;58;34;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 169 (4-1075578) prophage linear Cluster_2 Gammaproteobacteria_gi_545238244-232461-271073 hallmark;refseq 48;43;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 170 (4-3026949) prophage linear Cluster_7 Gammaproteobacteria_gi_545238244-727103-763044 hallmark;refseq 44;34;8;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 170 (4-3026949) prophage linear Cluster_0 Gammaproteobacteria_gi_545238336-545738-600904 hallmark;refseq;vdb 54;29;17;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 170 (4-3026949) prophage linear Cluster_2 Gammaproteobacteria_gi_545238724-533561-576607 hallmark;refseq 58;49;4;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 172 (4-3248542) prophage linear Cluster_7 Gammaproteobacteria_gi_545238743-3525397-3602765 hallmark;refseq 100;60;32;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 173 (3-9175482) prophage linear Cluster_1 Gammaproteobacteria_gi_545238897-1048161-1077416 hallmark;refseq 38;21;13;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 175 (4-3405184) prophage linear Cluster_10 Gammaproteobacteria_gi_545238897-771980-812723 hallmark;refseq 56;46;5;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 175 (4-3405184) prophage linear Cluster_11 Gammaproteobacteria_gi_545239025-324053-355909 hallmark;refseq;vdb 38;30;5;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 175 (4-3405184) prophage linear Cluster_1 Gammaproteobacteria_gi_545239141-0-33077 hallmark;refseq 50;25;17;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 175 (4-3405184) prophage linear Cluster_10 Gammaproteobacteria_gi_545239141-650887-693486 hallmark;refseq 55;50;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 175 (4-3405184) prophage linear Cluster_7 Gammaproteobacteria_gi_545239326-1800716-1842971 hallmark;refseq 59;28;15;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 176 (4-3428664) prophage linear Cluster_0 Gammaproteobacteria_gi_545239369-2245341-2278121 hallmark;refseq 40;34;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 180 (4-3051617) prophage linear Cluster_0 Gammaproteobacteria_gi_545239369-2734430-2774188 hallmark;refseq 50;46;1;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 180 (4-3051617) prophage linear Cluster_7 Gammaproteobacteria_gi_545239512-0-26294 hallmark;refseq 38;30;5;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 183 (4-3205932) prophage linear Cluster_1 Gammaproteobacteria_gi_545239561-442640-472357 hallmark;refseq 40;34;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 183 (4-3205932) prophage linear Cluster_0 Gammaproteobacteria_gi_545239606-1373451-1409805 hallmark;refseq 49;46;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 183 (4-3205932) prophage linear Cluster_7 Gammaproteobacteria_gi_545239676-1047651-1098998 hallmark;refseq 61;33;19;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 184 (4-3343286) prophage linear Cluster_1 Gammaproteobacteria_gi_545239676-1407792-1436592 hallmark;refseq;vdb 35;28;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 184 (4-3343286) prophage linear Cluster_1 Gammaproteobacteria_gi_545239676-771472-812215 hallmark;refseq 56;46;5;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 184 (4-3343286) prophage linear Cluster_11 Gammaproteobacteria_gi_545239725-1123140-1165739 hallmark;refseq 55;50;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 184 (4-3343286) prophage linear Cluster_7 Gammaproteobacteria_gi_545239860-1130130-1168803 hallmark;refseq 49;45;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 185 (4-2876639) prophage linear Cluster_7 Gammaproteobacteria_gi_545239860-705-5669 hallmark;noncaudo 8;3;1;4 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 185 (4-2876639) prophage linear Cluster_36 Gammaproteobacteria_gi_545239860-956693-999756 hallmark;refseq 52;39;6;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 185 (4-2876639) prophage linear Cluster_11 Gammaproteobacteria_gi_545239945-473352-517142 hallmark;refseq;vdb 56;43;11;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 185 (4-2876639) prophage linear Cluster_2 Gammaproteobacteria_gi_545239962-117996-168452 hallmark;refseq;vdb 58;34;16;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 185 (4-2876639) prophage linear Cluster_2 Gammaproteobacteria_gi_545239969 hallmark;refseq 11;7;;4 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 185 (4-2876639) extrachromosomal linear Cluster_36 Gammaproteobacteria_gi_545239994 hallmark;refseq 41;31;7;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 186 (4-3405044) extrachromosomal linear Cluster_21 Gammaproteobacteria_gi_545240007 hallmark;refseq 58;28;15;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 186 (4-3405044) extrachromosomal circular Cluster_0 Gammaproteobacteria_gi_545240021 hallmark;refseq 64;38;16;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 186 (4-3405044) extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_545240026 hallmark;refseq 17;13;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 186 (4-3405044) extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_545240088 hallmark;refseq 14;11;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 186 (4-3405044) extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_545240156-609060-623169 hallmark;refseq 18;15;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 187 (4-4471660) prophage linear Cluster_22 Gammaproteobacteria_gi_545240511-876032-921693 hallmark;refseq 61;51;7;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 188 (4-2356988) prophage linear Cluster_1 Gammaproteobacteria_gi_545240590-42841-76932 hallmark;refseq 45;36;5;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 189 (4-3220125) prophage linear Cluster_0 Gammaproteobacteria_gi_545240946-742371-777178 hallmark;refseq 51;32;14;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 190 (4-3255514) prophage linear Cluster_1 Gammaproteobacteria_gi_545241772-107-19881 hallmark;refseq 14;12;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 191 (3-9341900) prophage linear Cluster_0 Gammaproteobacteria_gi_545241835-980613-998538 hallmark;refseq 22;17;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 191 (3-9341900) prophage linear Cluster_0 Gammaproteobacteria_gi_545241838-0-10386 hallmark;refseq 14;13;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 191 (3-9341900) prophage linear Cluster_0 Gammaproteobacteria_gi_545241860-697260-707481 hallmark;refseq 17;14;;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 191 (3-9341900) prophage linear Cluster_0 Gammaproteobacteria_gi_545241867-547387-593759 hallmark;refseq;vdb 53;30;17;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 191 (3-9341900) prophage linear Cluster_2 Gammaproteobacteria_gi_545242698-2172511-2206234 hallmark;refseq 43;34;3;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 193 (4-3331423) prophage linear Cluster_0 Gammaproteobacteria_gi_545244109 hallmark 31;12;7;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 198 (4-3206106) extrachromosomal linear Cluster_48 Gammaproteobacteria_gi_545244304-2424557-2468883 hallmark;refseq 58;53;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 198 (4-3206106) prophage linear Cluster_7 Gammaproteobacteria_gi_545244392-1624299-1666433 hallmark;refseq;vdb 53;40;9;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 198 (4-3206106) prophage linear Cluster_1 Gammaproteobacteria_gi_545244957-1955861-1988640 hallmark;refseq 40;33;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 201 (4-4459431) prophage linear Cluster_0 Gammaproteobacteria_gi_545244957-2414720-2454689 hallmark;refseq 55;51;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 201 (4-4459431) prophage linear Cluster_7 Gammaproteobacteria_gi_545245029-34740-72374 hallmark;refseq 41;32;4;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 202 (4-3163997) prophage linear Cluster_0 Gammaproteobacteria_gi_545245080-814747-857001 hallmark;refseq 59;28;15;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 202 (4-3163997) prophage linear Cluster_0 Gammaproteobacteria_gi_545245219-1001364-1034144 hallmark;refseq 39;33;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 203 (4-3126218) prophage linear Cluster_0 Gammaproteobacteria_gi_545245544-10393-90993 hallmark;refseq 98;59;19;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 205 (4-3094677) prophage linear Cluster_0 Gammaproteobacteria_gi_545245614-1036860-1079115 hallmark;refseq 60;28;15;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 205 (4-3094677) prophage linear Cluster_0 Gammaproteobacteria_gi_545245633-64325-96847 hallmark;refseq 40;34;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 205 (4-3094677) prophage linear Cluster_0 Gammaproteobacteria_gi_545245678-1459764-1536095 hallmark;refseq 100;60;32;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 206 (4-3128229) prophage linear Cluster_1 Gammaproteobacteria_gi_545245736 hallmark;refseq 50;43;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 206 (4-3128229) extrachromosomal circular Cluster_7 Gammaproteobacteria_gi_545245962-1303271-1352502 hallmark;refseq;vdb 67;48;9;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 207 (4-3113221) prophage linear Cluster_1 Gammaproteobacteria_gi_545245983 hallmark;refseq 30;24;6; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 208 (4-3112292) extrachromosomal linear Cluster_21 Gammaproteobacteria_gi_545245993-1106704-1183361 hallmark;refseq 100;60;32;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 208 (4-3112292) prophage linear Cluster_1 Gammaproteobacteria_gi_545245993-2206799-2237142 hallmark;refseq 40;35;5; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 208 (4-3112292) prophage linear Cluster_0 Gammaproteobacteria_gi_545246213-1720008-1735229 hallmark;refseq 17;14;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 209 (4-3062651) prophage linear Cluster_0 Gammaproteobacteria_gi_545246213-3227386-3241508 hallmark;refseq 20;15;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 209 (4-3062651) prophage linear Cluster_0 Gammaproteobacteria_gi_545246286 refseq 20;18;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 211 (4-3041891) extrachromosomal linear Cluster_261 Gammaproteobacteria_gi_545246407 hallmark;refseq 68;34;14;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 212 (3-9305343) extrachromosomal linear Cluster_48 Gammaproteobacteria_gi_545246475-190336-223098 hallmark;refseq 42;37;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 213 (4-3042928) prophage linear Cluster_0 Gammaproteobacteria_gi_545246532 hallmark;refseq 80;34;26;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 213 (4-3042928) extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_545246600-1106852-1183560 hallmark;refseq 100;60;31;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 215 (4-3008371) prophage linear Cluster_1 Gammaproteobacteria_gi_545246600-4324549-4355663 hallmark;refseq 42;35;3;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 215 (4-3008371) prophage linear Cluster_0 Gammaproteobacteria_gi_545246759-69-25752 hallmark;refseq 34;28;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 217 (4-1022806) prophage linear Cluster_10 Gammaproteobacteria_gi_545246765 refseq 20;11;1;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 217 (4-1022806) extrachromosomal linear Cluster_21 Gammaproteobacteria_gi_545246778 hallmark;refseq 39;23;6;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 217 (4-1022806) extrachromosomal linear Cluster_21 Gammaproteobacteria_gi_545246805-1018983-1054927 hallmark;refseq 44;34;8;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 217 (4-1022806) prophage linear Cluster_0 Gammaproteobacteria_gi_545246805-123530-194463 hallmark;refseq 100;68;17;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 217 (4-1022806) prophage linear Cluster_10 Gammaproteobacteria_gi_545247428-1202180-1244086 hallmark;refseq 50;39;6;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 221 (4-3136817) prophage linear Cluster_1 Gammaproteobacteria_gi_545247476 hallmark;refseq 117;81;15;21 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 221 (4-3136817) extrachromosomal linear Cluster_79 Gammaproteobacteria_gi_545247707-1312851-1353464 hallmark;refseq 54;49;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 222 (4-2977443) prophage linear Cluster_7 Gammaproteobacteria_gi_545247707-848395-880529 hallmark;refseq 41;35;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 222 (4-2977443) prophage linear Cluster_0 Gammaproteobacteria_gi_545247774 refseq 8;5;;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 223 (4-2976528) extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_545247928 hallmark;refseq 25;21;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 225 (4-1273116) extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_545248148-54176-92896 hallmark;refseq 55;49;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 227 (4-2277670) prophage linear Cluster_3 Gammaproteobacteria_gi_545248335-1240130-1291163 hallmark;refseq 69;56;7;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 228 (4-7787030) prophage linear Cluster_3 Gammaproteobacteria_gi_545248603-334941-378620 hallmark;refseq;vdb 56;42;8;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KOEGE 3 (4a) prophage linear Cluster_1 Gammaproteobacteria_gi_545249288-45657-57096 hallmark;refseq 15;15;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KOEGE 7 (16a) prophage linear Cluster_3 Gammaproteobacteria_gi_545249531-68690-100268 hallmark;refseq 38;34;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KOEGE 7 (16a) prophage linear Cluster_0 Gammaproteobacteria_gi_545249659 refseq 78;56;11;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KOEGE 10 (25a) extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_545249692 hallmark;refseq 45;38;3;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KOEGE 10 (25a) extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_545249912-1428250-1468518 hallmark;refseq 59;52;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KOEGE 10 (25a) prophage linear Cluster_11 Gammaproteobacteria_gi_545249912-438344-470200 hallmark;refseq;vdb 40;32;5;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KOEGE 10 (25a) prophage linear Cluster_1 Gammaproteobacteria_gi_545250107-0-6105 hallmark;noncaudo 10;4;2;4 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KOEGE 30 (63a) prophage linear Cluster_36 Gammaproteobacteria_gi_545250107-568757-603655 hallmark;refseq 50;46;1;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KOEGE 30 (63a) prophage linear Cluster_3 Gammaproteobacteria_gi_545250175-175087-213939 hallmark;refseq 49;38;4;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KOEGE 30 (63a) prophage linear Cluster_2 Gammaproteobacteria_gi_545250186 hallmark;refseq 12;7;;5 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KOEGE 30 (63a) extrachromosomal circular Cluster_36 Gammaproteobacteria_gi_545250371-2005021-2037157 hallmark;refseq 40;36;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KOEGE 32 (66a) prophage linear Cluster_0 Gammaproteobacteria_gi_545250371-3663255-3714136 hallmark;refseq;vdb 65;40;17;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KOEGE 32 (66a) prophage linear Cluster_1 Gammaproteobacteria_gi_545250657-0-38644 hallmark;refseq 53;38;11;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KOEGE 33 (68a) prophage linear Cluster_1 Gammaproteobacteria_gi_545251347-1752536-1783915 hallmark;refseq 40;33;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KOEGE 40 (102a) prophage linear Cluster_0 Gammaproteobacteria_gi_545251347-2031730-2066873 hallmark;refseq 50;38;10;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KOEGE 40 (102a) prophage linear Cluster_4 Gammaproteobacteria_gi_545251915 noncaudo 12;3;1;8 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KOEGE 44 (106a) extrachromosomal circular Cluster_51 Gammaproteobacteria_gi_545251958-53942-97100 hallmark;refseq 56;44;9;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KOEGE 56 (169a) prophage linear Cluster_1 Gammaproteobacteria_gi_545252028 hallmark;refseq 41;39;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KOEGE 56 (169a) extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_545252404-330402-342252 hallmark;noncaudo 15;4;6;5 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KOEGE 58 (171a) prophage linear Cluster_36 Gammaproteobacteria_gi_545252467-168259-207135 hallmark;refseq 49;38;4;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KOEGE 58 (171a) prophage linear Cluster_2 Gammaproteobacteria_gi_545252614-594603-636012 hallmark;refseq 56;47;6;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KOEGE 61 (174a) prophage linear Cluster_11 Gammaproteobacteria_gi_545252842-1349892-1426112 hallmark;refseq 100;58;34;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KOEGE 62 (175a) prophage linear Cluster_1 Gammaproteobacteria_gi_545252842-2944685-2986336 hallmark;refseq 58;47;6;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KOEGE 62 (175a) prophage linear Cluster_7 Gammaproteobacteria_gi_545252842-917729-955192 hallmark;refseq 56;46;6;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KOEGE 62 (175a) prophage linear Cluster_3 Gammaproteobacteria_gi_545252904-1557303-1586789 hallmark;refseq 42;36;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KOEGE 62 (175a) prophage linear Cluster_0 Gammaproteobacteria_gi_545253004-0-31826 hallmark;refseq 29;24;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KOEGE 68 (182a) prophage linear Cluster_1 Gammaproteobacteria_gi_545253223 hallmark;refseq 10;7;;3 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KOEGE 70 (185a) extrachromosomal linear Cluster_36 Gammaproteobacteria_gi_545253336-0-6943 hallmark;noncaudo 11;7;;4 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KOEGE 70 (185a) prophage linear Cluster_36 Gammaproteobacteria_gi_545253336-1130354-1170188 hallmark;refseq 54;49;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KOEGE 70 (185a) prophage linear Cluster_7 Gammaproteobacteria_gi_545253336-959515-999899 hallmark;refseq 63;51;6;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KOEGE 70 (185a) prophage linear Cluster_11 Gammaproteobacteria_gi_545253455-52139-98849 hallmark;refseq 60;45;10;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KOEGE 70 (185a) prophage linear Cluster_1 Gammaproteobacteria_gi_545255401-4133103-4146597 hallmark;refseq 17;14;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KOEGE 71 (186a) prophage linear Cluster_22 Gammaproteobacteria_gi_545255484 refseq 20;16;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KOEGE 71 (186a) extrachromosomal linear Cluster_261 Gammaproteobacteria_gi_545255684 hallmark;refseq 107;69;12;26 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KOEGE 73 (195a) extrachromosomal circular Cluster_79 Gammaproteobacteria_gi_545255696-270760-347417 hallmark;refseq 99;59;32;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KOEGE 73 (195a) prophage linear Cluster_1 Gammaproteobacteria_gi_545256008-1427918-1469882 hallmark;refseq 55;49;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KOEGE 77 (202a) prophage linear Cluster_7 Gammaproteobacteria_gi_545256008-336605-357499 hallmark;refseq 21;18;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KOEGE 77 (202a) prophage linear Cluster_1 Gammaproteobacteria_gi_545256008-945129-977024 hallmark;refseq 41;37;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KOEGE 77 (202a) prophage linear Cluster_0 Gammaproteobacteria_gi_545256333-3202787-3235107 hallmark;refseq 39;33;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KOEGE 118 (317a) prophage linear Cluster_0 Gammaproteobacteria_gi_545256727-2915627-2964996 hallmark;refseq 57;43;5;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli KOEGE 131 (358a) prophage linear Cluster_0 Gammaproteobacteria_gi_545257075-2325335-2365106 hallmark;refseq 56;48;5;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3014-1 prophage linear Cluster_11 Gammaproteobacteria_gi_545257202-445320-492169 hallmark;refseq;vdb 61;39;17;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3014-1 prophage linear Cluster_1 Gammaproteobacteria_gi_545257457-2250934-2288751 hallmark;refseq 56;49;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3022-1 prophage linear Cluster_11 Gammaproteobacteria_gi_545258826-0-28999 hallmark;refseq 44;29;7;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3052-1 prophage linear Cluster_1 Gammaproteobacteria_gi_545259628-0-41769 hallmark;refseq 55;41;10;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3065-1 prophage linear Cluster_1 Gammaproteobacteria_gi_545260180 hallmark;refseq 32;16;5;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3087-1 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_545260185 hallmark;refseq 13;8;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3087-1 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_545260250-208570-262119 hallmark;refseq 60;33;16;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3087-1 prophage linear Cluster_26 Gammaproteobacteria_gi_545260696-1088217-1126034 hallmark;refseq 56;49;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3097-1 prophage linear Cluster_11 Gammaproteobacteria_gi_545260942 hallmark;refseq 45;38;;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3108-1 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_545261472-271833-322281 hallmark;refseq 60;38;11;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3108-1 prophage linear Cluster_26 Gammaproteobacteria_gi_545262254-29-8260 hallmark;noncaudo 13;7;;6 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3113-1 prophage linear Cluster_36 Gammaproteobacteria_gi_545262390-142510-181362 hallmark;refseq 50;40;4;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3113-1 prophage linear Cluster_2 Gammaproteobacteria_gi_545262515-2325173-2367965 hallmark;refseq 64;50;10;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3117-1 prophage linear Cluster_3 Gammaproteobacteria_gi_545262700-526397-564699 hallmark;refseq 55;47;4;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3121-1 prophage linear Cluster_11 Gammaproteobacteria_gi_545262821-530036-569470 hallmark;refseq 54;49;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3121-1 prophage linear Cluster_7 Gammaproteobacteria_gi_545263222-67971-100740 hallmark;refseq 43;38;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3122-1 prophage linear Cluster_0 Gammaproteobacteria_gi_545263380-103134-128889 hallmark;refseq 37;31;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3124-1 prophage linear Cluster_3 Gammaproteobacteria_gi_545267136-1418451-1462466 hallmark;refseq 59;50;5;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3139-1 prophage linear Cluster_7 Gammaproteobacteria_gi_545267432-2331943-2370947 hallmark;refseq 55;46;4;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3140-1 prophage linear Cluster_3 Gammaproteobacteria_gi_545267585-0-24117 hallmark;refseq 38;26;8;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3140-1 prophage linear Cluster_10 Gammaproteobacteria_gi_545267585-281702-343983 hallmark;refseq 57;39;13;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3140-1 prophage linear Cluster_2 Gammaproteobacteria_gi_545267615-1687-16137 hallmark;refseq;vdb 15;9;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3140-1 prophage linear Cluster_1 Gammaproteobacteria_gi_545268293-2025070-2066848 hallmark;refseq 57;40;10;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3150-1 prophage linear Cluster_0 Gammaproteobacteria_gi_545269403 noncaudo 9;3;;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3152-1 extrachromosomal circular Cluster_270 Gammaproteobacteria_gi_545269597-0-27856 hallmark;refseq 31;24;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3152-1 prophage linear Cluster_1 Gammaproteobacteria_gi_545269922-175676-206727 hallmark;refseq 40;33;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3152-1 prophage linear Cluster_0 Gammaproteobacteria_gi_545270328-716265-745588 hallmark;refseq 39;35;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3155-1 prophage linear Cluster_0 Gammaproteobacteria_gi_545270464 hallmark;refseq 38;25;11;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3155-1 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_545270467 hallmark;refseq 38;25;11;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3155-1 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_545270674-518498-541488 hallmark;refseq 22;18;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3159-1 prophage linear Cluster_2 Gammaproteobacteria_gi_545270999 noncaudo 13;3;1;9 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3160-1 extrachromosomal circular Cluster_51 Gammaproteobacteria_gi_545271121-351279-393801 hallmark;refseq 59;28;16;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3160-1 prophage linear Cluster_0 Gammaproteobacteria_gi_545271248-405550-440625 hallmark;refseq 49;46;;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3160-1 prophage linear Cluster_3 Gammaproteobacteria_gi_545271721-327069-353789 hallmark;refseq;vdb 35;26;6;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3162-1 prophage linear Cluster_10 Gammaproteobacteria_gi_545271809-965548-1002932 hallmark;refseq 44;34;8;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3162-1 prophage linear Cluster_0 Gammaproteobacteria_gi_545272037-2373305-2404900 hallmark;refseq 41;35;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3163-1 prophage linear Cluster_0 Gammaproteobacteria_gi_545272155-600374-647965 hallmark;refseq;vdb 60;35;17;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3163-1 prophage linear Cluster_1 Gammaproteobacteria_gi_545272970 hallmark;refseq 68;51;8;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3174-1 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_545273013-576233-617502 hallmark;refseq 57;44;8;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3174-1 prophage linear Cluster_1 Gammaproteobacteria_gi_545273063-50162-102553 hallmark;refseq;vdb 54;29;19;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3174-1 prophage linear Cluster_1 Gammaproteobacteria_gi_545273324-70483-98689 hallmark;refseq 36;33;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3174-1 prophage linear Cluster_0 Gammaproteobacteria_gi_545273462-98979-181523 hallmark;refseq 100;55;37;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3175-1 prophage linear Cluster_1 Gammaproteobacteria_gi_545274516-2157251-2197690 hallmark;refseq 60;53;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3176-1 prophage linear Cluster_11 Gammaproteobacteria_gi_545274516-941316-988442 hallmark;refseq 62;34;15;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3176-1 prophage linear Cluster_10 Gammaproteobacteria_gi_545275721 refseq 15;10;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3190-1 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_545275724 refseq 9;7;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3190-1 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_545275745 hallmark;refseq;vdb 76;42;23;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3190-1 extrachromosomal linear Cluster_21 Gammaproteobacteria_gi_545275768-328-13752 noncaudo 14;4;;10 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3190-1 prophage linear Cluster_51 Gammaproteobacteria_gi_545275870-418441-428498 hallmark;refseq 13;12;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3190-1 prophage linear Cluster_21 Gammaproteobacteria_gi_545275952-1107332-1120119 hallmark;refseq 19;16;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3190-1 prophage linear Cluster_1 Gammaproteobacteria_gi_545276070 hallmark;refseq 19;18;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3193-1 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_545276594-2256557-2287971 hallmark;refseq 41;34;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3199-1 prophage linear Cluster_0 Gammaproteobacteria_gi_545276594-2589487-2630603 hallmark;refseq 66;58;4;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3199-1 prophage linear Cluster_11 Gammaproteobacteria_gi_545276679-50849-99029 hallmark;refseq 61;50;4;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3199-1 prophage linear Cluster_3 Gammaproteobacteria_gi_545278032-51107-114058 hallmark;refseq 71;51;11;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3201-1 prophage linear Cluster_5 Gammaproteobacteria_gi_545278032-717-29153 hallmark;refseq 30;18;8;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3201-1 prophage linear Cluster_1 Gammaproteobacteria_gi_545278352 hallmark;refseq 15;11;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3203-1 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_545278396-64-33877 hallmark;refseq 43;33;6;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3203-1 prophage linear Cluster_1 Gammaproteobacteria_gi_545278463-309273-335105 hallmark;refseq 29;25;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3203-1 prophage linear Cluster_1 Gammaproteobacteria_gi_545278647-1964623-1998074 hallmark;refseq 42;35;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3206-1 prophage linear Cluster_0 Gammaproteobacteria_gi_545278742-516017-572122 hallmark;refseq;vdb 58;35;17;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3206-1 prophage linear Cluster_2 Gammaproteobacteria_gi_545282778-52-44033 hallmark;refseq 61;49;10;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3212-1 prophage linear Cluster_1 Gammaproteobacteria_gi_545282814 hallmark;refseq 16;13;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3212-1 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_545282974-114025-145799 hallmark;refseq 42;25;9;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3212-1 prophage linear Cluster_10 Gammaproteobacteria_gi_545283388-1193832-1250717 hallmark;refseq 62;45;7;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3215-1 prophage linear Cluster_5 Gammaproteobacteria_gi_545283408-720211-753272 hallmark;refseq 43;38;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3215-1 prophage linear Cluster_0 Gammaproteobacteria_gi_545283850-528877-569874 hallmark;refseq 59;50;5;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3222-1 prophage linear Cluster_11 Gammaproteobacteria_gi_545283882-526228-565662 hallmark;refseq 54;49;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3222-1 prophage linear Cluster_7 Gammaproteobacteria_gi_545284387-2598256-2638995 hallmark;refseq 54;39;5;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3240-1 prophage linear Cluster_3 Gammaproteobacteria_gi_545284387-274566-320373 hallmark;refseq 59;38;11;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3240-1 prophage linear Cluster_1 Gammaproteobacteria_gi_545284600-629400-672090 hallmark;refseq 60;53;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3240-1 prophage linear Cluster_3 Gammaproteobacteria_gi_545284746-52401-88354 hallmark;refseq 52;48;1;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3257-1 prophage linear Cluster_3 Gammaproteobacteria_gi_545284777 refseq 32;17;7;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3257-1 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_545284804-0-45899 hallmark;refseq;vdb 53;31;18;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3257-1 prophage linear Cluster_4 Gammaproteobacteria_gi_545285087-63035-94478 hallmark;refseq 40;34;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3264-1 prophage linear Cluster_0 Gammaproteobacteria_gi_545285126-720361-751804 hallmark;refseq 40;34;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3268-1 prophage linear Cluster_0 Gammaproteobacteria_gi_545285288-73777-115843 hallmark;refseq 57;48;5;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3271-1 prophage linear Cluster_11 Gammaproteobacteria_gi_545285924-269109-314362 hallmark;refseq;vdb 58;38;15;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3292-1 prophage linear Cluster_2 Gammaproteobacteria_gi_545286053-192-41718 hallmark;refseq 52;31;14;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3292-1 prophage linear Cluster_1 Gammaproteobacteria_gi_545286109 hallmark;refseq 17;14;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3292-1 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_545286160 refseq 22;10;7;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3292-1 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_545286282 hallmark;refseq 31;21;7;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3292-1 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_545286655-597073-636497 hallmark;refseq 51;47;1;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3298-1 prophage linear Cluster_7 Gammaproteobacteria_gi_545286746 hallmark;refseq 25;21;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3304-1 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_545286758 hallmark;refseq 16;10;6; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3304-1 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_545286815 refseq 23;12;4;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3304-1 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_545286818 refseq 10;8;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3304-1 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_545286904-0-37387 hallmark;refseq 45;38;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3304-1 prophage linear Cluster_0 Gammaproteobacteria_gi_545287587-220162-242166 hallmark;refseq 33;25;4;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3317-1 prophage linear Cluster_3 Gammaproteobacteria_gi_545288473-1239164-1250008 hallmark;refseq 17;14;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3329-1 prophage linear Cluster_26 Gammaproteobacteria_gi_545288473-1527403-1590221 hallmark;refseq 75;50;12;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3329-1 prophage linear Cluster_5 Gammaproteobacteria_gi_545288473-2407889-2448281 hallmark;refseq 54;46;7;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3329-1 prophage linear Cluster_11 Gammaproteobacteria_gi_545288473-535049-578030 hallmark;refseq 55;43;9;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3329-1 prophage linear Cluster_1 Gammaproteobacteria_gi_545288631-410628-458415 hallmark;refseq 49;27;17;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3337-1 prophage linear Cluster_1 Gammaproteobacteria_gi_545288772-2274639-2314326 hallmark;refseq 60;50;5;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3341-1 prophage linear Cluster_11 Gammaproteobacteria_gi_545288843-554775-594162 hallmark;refseq 50;38;9;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3355-1 prophage linear Cluster_1 Gammaproteobacteria_gi_545289223-114900-160919 hallmark;refseq;vdb 60;36;18;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3391-1 prophage linear Cluster_1 Gammaproteobacteria_gi_545289369-273016-275209 hallmark;noncaudo 3;3;; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3490-1 prophage linear Cluster_36 Gammaproteobacteria_gi_545289424 hallmark;noncaudo 8;4;;4 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3490-1 extrachromosomal linear Cluster_36 Gammaproteobacteria_gi_545290352-1292064-1339760 hallmark;refseq 62;50;6;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3592-1 prophage linear Cluster_7 Gammaproteobacteria_gi_545290426-834549-849258 hallmark;refseq 22;19;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3609-1 prophage linear Cluster_1 Gammaproteobacteria_gi_545290465-2026437-2073310 hallmark;refseq 63;51;6;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3609-1 prophage linear Cluster_7 Gammaproteobacteria_gi_545290511-178373-217225 hallmark;refseq 49;38;4;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3617-1 prophage linear Cluster_2 Gammaproteobacteria_gi_545290530 hallmark;refseq 19;16;;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3617-1 extrachromosomal linear Cluster_7 Gammaproteobacteria_gi_545291582-75416-81575 hallmark;noncaudo 10;4;2;4 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3617-1 prophage linear Cluster_36 Gammaproteobacteria_gi_545292015-1286696-1294927 hallmark;noncaudo 13;7;;6 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3617-1 prophage linear Cluster_36 Gammaproteobacteria_gi_545292138-0-35455 hallmark;refseq 52;35;10;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3632-1 prophage linear Cluster_1 Gammaproteobacteria_gi_545292256-3570304-3616121 hallmark;refseq;vdb 58;36;16;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3632-1 prophage linear Cluster_2 Gammaproteobacteria_gi_545293406-97658-147825 hallmark;refseq 73;57;11;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3656-1 prophage linear Cluster_1 Gammaproteobacteria_gi_545294044-1102442-1135222 hallmark;refseq 40;33;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3662-1 prophage linear Cluster_0 Gammaproteobacteria_gi_545294044-1731954-1769398 hallmark;refseq 45;36;8;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3662-1 prophage linear Cluster_1 Gammaproteobacteria_gi_545295277-547033-586519 hallmark;refseq 58;52;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3687-1 prophage linear Cluster_11 Gammaproteobacteria_gi_545295392-129076-169628 hallmark;refseq 60;54;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3694-1 prophage linear Cluster_11 Gammaproteobacteria_gi_545295754-275695-320044 hallmark;refseq 59;46;4;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3703-1 prophage linear Cluster_3 Gammaproteobacteria_gi_545296339-34100-67451 hallmark;refseq 39;33;6; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3703-1 prophage linear Cluster_0 Gammaproteobacteria_gi_545296339-633034-678468 hallmark;refseq 59;47;6;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3703-1 prophage linear Cluster_0 Gammaproteobacteria_gi_545296538-104011-145250 hallmark;refseq 60;55;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3705-1 prophage linear Cluster_11 Gammaproteobacteria_gi_545296645 hallmark;refseq 17;12;5; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3707-1 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_545296689-536465-577784 hallmark;refseq 57;51;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3707-1 prophage linear Cluster_7 Gammaproteobacteria_gi_545297021-886505-928207 hallmark;refseq 52;40;9;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3718-1 prophage linear Cluster_1 Gammaproteobacteria_gi_545297075-128136-147083 hallmark;refseq 22;17;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3718-1 prophage linear Cluster_26 Gammaproteobacteria_gi_545297393-268107-342825 hallmark;refseq 71;51;7;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3718-1 prophage linear Cluster_5 Gammaproteobacteria_gi_545297982-215006-249532 hallmark;refseq 44;36;6;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3718-1 prophage linear Cluster_0 Gammaproteobacteria_gi_545298285-750433-782227 hallmark;refseq 40;30;2;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3805-1 prophage linear Cluster_0 Gammaproteobacteria_gi_545298701-69748-99933 hallmark;refseq 39;33;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3805-1 prophage linear Cluster_0 Gammaproteobacteria_gi_545298801-160601-196664 hallmark;refseq 52;50;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3821-1 prophage linear Cluster_3 Gammaproteobacteria_gi_545298835-227462-267504 hallmark;refseq 55;45;7;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3821-1 prophage linear Cluster_4 Gammaproteobacteria_gi_545298889 noncaudo 13;3;1;9 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3834-1 extrachromosomal circular Cluster_51 Gammaproteobacteria_gi_545299104-334778-379252 hallmark;refseq 67;41;15;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3834-1 prophage linear Cluster_1 Gammaproteobacteria_gi_545299623-2850910-2886062 hallmark;refseq 48;45;;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3893-1 prophage linear Cluster_3 Gammaproteobacteria_gi_545299623-2922946-2973322 hallmark;refseq;vdb 61;37;17;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3893-1 prophage linear Cluster_2 Gammaproteobacteria_gi_545299623-94700-130941 hallmark;refseq 45;35;8;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3893-1 prophage linear Cluster_0 Gammaproteobacteria_gi_545299634 refseq 17;9;6;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3893-1 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_545300162-896859-911047 hallmark;refseq 17;15;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3899-1 prophage linear Cluster_22 Gammaproteobacteria_gi_545311870-43039-60414 hallmark;refseq 25;24;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. 10-34587 prophage linear Cluster_0 Gammaproteobacteria_gi_545312308 refseq 34;21;9;4 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. 10-34587 extrachromosomal linear Cluster_224 Gammaproteobacteria_gi_545464185-41-48538 hallmark 62;22;9;31 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas alcaligenes NBRC 14159 prophage linear Cluster_249 Gammaproteobacteria_gi_545471389-0-7138 hallmark;noncaudo 12;7;;5 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio alginolyticus NBRC 15630 = ATCC 17749 prophage linear Cluster_14 Gammaproteobacteria_gi_545472011-233-31267 hallmark 37;10;10;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio azureus NBRC 104587 prophage linear Cluster_419 Gammaproteobacteria_gi_545472131-358-10120 noncaudo 12;7;;5 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio azureus NBRC 104587 prophage linear Cluster_14 Gammaproteobacteria_gi_545472445-24119-72628 hallmark;refseq 60;25;8;27 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio azureus NBRC 104587 prophage linear Cluster_300 Gammaproteobacteria_gi_545472498-150-14544 hallmark;refseq 16;14;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio azureus NBRC 104587 prophage linear Cluster_0 Gammaproteobacteria_gi_545474110-42062-60028 hallmark;refseq 18;12;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio azureus NBRC 104587 prophage linear Cluster_0 Gammaproteobacteria_gi_545595213-260-34541 hallmark;refseq 55;34;9;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Avibacterium Avibacterium paragallinarum JF4211 prophage linear Cluster_134 Gammaproteobacteria_gi_545595286 hallmark;refseq 75;46;7;22 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Avibacterium Avibacterium paragallinarum JF4211 extrachromosomal linear Cluster_21 Gammaproteobacteria_gi_545595667 hallmark;refseq 29;22;2;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Avibacterium Avibacterium paragallinarum JF4211 extrachromosomal linear Cluster_44 Gammaproteobacteria_gi_545595683 hallmark;refseq 27;16;5;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Avibacterium Avibacterium paragallinarum JF4211 extrachromosomal linear Cluster_22 Gammaproteobacteria_gi_545595700 hallmark 39;16;7;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Avibacterium Avibacterium paragallinarum JF4211 extrachromosomal linear Cluster_21 Gammaproteobacteria_gi_545595718-7255-20053 hallmark;refseq 18;12;6; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Avibacterium Avibacterium paragallinarum JF4211 prophage linear Cluster_3 Gammaproteobacteria_gi_545595865 hallmark 28;9;7;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Avibacterium Avibacterium paragallinarum JF4211 extrachromosomal linear Cluster_21 Gammaproteobacteria_gi_545595879 refseq 11;8;;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Avibacterium Avibacterium paragallinarum JF4211 extrachromosomal linear Cluster_134 Gammaproteobacteria_gi_545609665-170936-208751 hallmark;refseq 52;27;18;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Pasteurella Pasteurella multocida subsp. multocida str. PMTB prophage linear Cluster_3 Gammaproteobacteria_gi_545908410 hallmark;refseq 62;25;12;25 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas putida LF54 extrachromosomal linear Cluster_83 Gammaproteobacteria_gi_546172769-56427-93111 hallmark;refseq 55;32;8;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Psychrobacter Psychrobacter aquaticus CMS 56 prophage linear Cluster_21 Gammaproteobacteria_gi_546182855 hallmark;refseq 21;18;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B28-2 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_546182889 hallmark;refseq 16;14;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B28-2 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_546182944-40667-52406 hallmark;refseq;vdb 11;7;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B28-2 prophage linear Cluster_0 Gammaproteobacteria_gi_546182947-758-24427 hallmark;refseq 32;26;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B28-2 prophage linear Cluster_0 Gammaproteobacteria_gi_546182949 refseq 26;25;1; Viruses;unclassified phages;unknown;unknown;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli B28-2 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_546183196 hallmark;refseq 34;28;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 91 (4-4638751) extrachromosomal linear Cluster_11 Gammaproteobacteria_gi_546183309-902399-923987 hallmark;refseq 24;20;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 91 (4-4638751) prophage linear Cluster_11 Gammaproteobacteria_gi_546183750 refseq 52;45;3;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 95JB1 extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_546183763 hallmark;refseq 13;8;5; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 95JB1 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_546183767 hallmark;refseq 19;12;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 95JB1 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_546183771 hallmark;refseq 26;11;5;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 95JB1 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_546183811 hallmark;refseq 49;41;2;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Punalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 95JB1 extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_546183828 hallmark;refseq 12;12;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 95JB1 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_546183840 refseq 17;16;1; Viruses;unclassified phages;unknown;unknown;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 95JB1 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_546183851-0-71767 hallmark;refseq 58;33;17;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 95JB1 prophage linear Cluster_3 Gammaproteobacteria_gi_547420840 hallmark;refseq 28;17;5;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella variicola CAG:634 extrachromosomal linear Cluster_148 Gammaproteobacteria_gi_547891785-29968-69901 hallmark;refseq 59;52;2;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli CAG:4 prophage linear Cluster_3 Gammaproteobacteria_gi_548572863 hallmark;vdb 19;8;4;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Thiotrichales;Piscirickettsiaceae;Piscirickettsia Piscirickettsia salmonis LF-89 = ATCC VR-1361 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_549478129-4274179-4289162 hallmark;refseq 17;14;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Thompson str. RM6836 prophage linear Cluster_22 Gammaproteobacteria_gi_549487522-1433723-1462960 hallmark;refseq 44;32;3;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;unknown Plautia stali symbiont prophage linear Cluster_21 Gammaproteobacteria_gi_549487522-925763-942432 hallmark;refseq;vdb 26;19;3;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;unknown Plautia stali symbiont prophage linear Cluster_21 Gammaproteobacteria_gi_549713031-2576270-2586301 noncaudo 15;7;4;4 Viruses;ssDNA viruses;unknown;Inoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas fuscans subsp. fuscans prophage linear Cluster_43 Gammaproteobacteria_gi_549722728-2719579-2769702 hallmark;refseq 60;53;2;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. DT2 prophage linear Cluster_1 Gammaproteobacteria_gi_549963374-757764-770589 noncaudo 15;7;3;5 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cyclitrophicus FF75 prophage linear Cluster_130 Gammaproteobacteria_gi_549963374-770520-781333 noncaudo 21;3;2;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cyclitrophicus FF75 prophage linear Cluster_215 Gammaproteobacteria_gi_550020189 hallmark;refseq 34;15;7;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio mimicus CAIM 1883 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_550024831 hallmark;refseq 12;8;;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio mimicus CAIM 1883 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_550028398 hallmark;refseq 36;16;7;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio mimicus CAIM 1882 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_550033138 hallmark;refseq 14;8;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio mimicus CAIM 1882 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_550039422-47764-101551 hallmark;refseq 71;50;6;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa VRFPA04 prophage linear Cluster_18 Gammaproteobacteria_gi_550039974-247912-284721 hallmark;refseq 54;52;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa VRFPA04 prophage linear Cluster_59 Gammaproteobacteria_gi_550040016-88-7320 noncaudo;vdb 9;8;1; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa VRFPA04 prophage linear Cluster_13 Gammaproteobacteria_gi_550041947 hallmark;refseq 51;36;5;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa VRFPA04 extrachromosomal linear Cluster_83 Gammaproteobacteria_gi_550048828 hallmark;refseq 16;13;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa VRFPA04 extrachromosomal linear Cluster_59 Gammaproteobacteria_gi_550050944-144-6745 refseq 9;6;;3 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa VRFPA04 prophage linear Cluster_13 Gammaproteobacteria_gi_550282576 refseq 10;5;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio nigripulchritudo SFn135 extrachromosomal linear Cluster_131 Gammaproteobacteria_gi_550284298 hallmark;refseq 30;15;2;13 Viruses;dsDNA viruses no RNA stage;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio nigripulchritudo SFn135 extrachromosomal linear Cluster_131 Gammaproteobacteria_gi_550286899 noncaudo 9;3;2;4 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio nigripulchritudo SFn135 extrachromosomal linear Cluster_228 Gammaproteobacteria_gi_550304393 hallmark;refseq 47;21;7;19 Viruses;dsDNA viruses no RNA stage;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio nigripulchritudo SO65 extrachromosomal circular Cluster_131 Gammaproteobacteria_gi_550350159 hallmark;refseq 102;42;10;50 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio nigripulchritudo SOn1 extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_550359971 refseq 12;7;;5 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio nigripulchritudo SOn1 extrachromosomal linear Cluster_130 Gammaproteobacteria_gi_550368177 refseq 10;5;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio nigripulchritudo Wn13 extrachromosomal linear Cluster_131 Gammaproteobacteria_gi_550370650 hallmark;refseq 30;15;2;13 Viruses;dsDNA viruses no RNA stage;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio nigripulchritudo Wn13 extrachromosomal linear Cluster_131 Gammaproteobacteria_gi_550392970-235-40300 hallmark;refseq 47;22;7;18 Viruses;dsDNA viruses no RNA stage;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio nigripulchritudo AM115 prophage linear Cluster_131 Gammaproteobacteria_gi_550400724 refseq 10;5;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio nigripulchritudo BLFn1 extrachromosomal linear Cluster_131 Gammaproteobacteria_gi_550401017 hallmark;refseq 30;15;2;13 Viruses;dsDNA viruses no RNA stage;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio nigripulchritudo BLFn1 extrachromosomal linear Cluster_131 Gammaproteobacteria_gi_550406366 refseq 10;5;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio nigripulchritudo ENn2 extrachromosomal linear Cluster_131 Gammaproteobacteria_gi_550408608-380-15324 hallmark;refseq 21;8;2;11 Viruses;dsDNA viruses no RNA stage;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio nigripulchritudo ENn2 prophage linear Cluster_131 Gammaproteobacteria_gi_550420495 hallmark;refseq 47;21;7;19 Viruses;dsDNA viruses no RNA stage;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio nigripulchritudo FTn2 extrachromosomal circular Cluster_131 Gammaproteobacteria_gi_550443072-1600311-1637871 hallmark;refseq 53;35;5;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae CG43 prophage linear Cluster_4 Gammaproteobacteria_gi_550550084-0-15803 hallmark;refseq 18;15;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Kentucky str. 13562 prophage linear Cluster_22 Gammaproteobacteria_gi_550550141-9333-51002 hallmark;refseq 34;23;5;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Kentucky str. 13562 prophage linear Cluster_5 Gammaproteobacteria_gi_550550516-63483-77321 hallmark;refseq 16;13;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Kentucky str. 29166 prophage linear Cluster_22 Gammaproteobacteria_gi_550550642 refseq 22;11;6;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Kentucky str. 29166 extrachromosomal linear Cluster_225 Gammaproteobacteria_gi_550550750-51453-67380 hallmark;refseq 18;15;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Kentucky str. 22694 prophage linear Cluster_22 Gammaproteobacteria_gi_550551015 hallmark;refseq 28;21;3;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Kentucky str. N312 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_550551215 hallmark;refseq 19;13;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Kentucky str. 20793 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_550551259-0-15840 hallmark;refseq 18;15;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Kentucky str. 20793 prophage linear Cluster_22 Gammaproteobacteria_gi_550551331 hallmark;refseq 30;25;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. #11-4 extrachromosomal linear Cluster_54 Gammaproteobacteria_gi_550551334 hallmark;refseq 24;19;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. #11-4 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_550551419 hallmark;refseq 31;25;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. #11-3 extrachromosomal linear Cluster_54 Gammaproteobacteria_gi_550551421 hallmark;refseq 23;19;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. #11-3 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_550551471-0-15779 hallmark;refseq 18;15;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. #11-2 prophage linear Cluster_22 Gammaproteobacteria_gi_550551488 hallmark;refseq 30;25;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. #11-2 extrachromosomal linear Cluster_54 Gammaproteobacteria_gi_550551491 hallmark;refseq 23;19;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. #11-2 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_550551625 hallmark;refseq 107;69;14;24 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. 34502 extrachromosomal linear Cluster_79 Gammaproteobacteria_gi_550551678-18240-76414 hallmark;refseq 41;28;8;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. 34502 prophage linear Cluster_22 Gammaproteobacteria_gi_550551706-22901-45493 hallmark;refseq 28;26;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. 34502 prophage linear Cluster_3 Gammaproteobacteria_gi_550551876-68437-96806 hallmark;vdb 39;16;12;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. 35423 prophage linear Cluster_0 Gammaproteobacteria_gi_550551904 hallmark;refseq 79;50;10;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. 35423 extrachromosomal linear Cluster_79 Gammaproteobacteria_gi_550551937 refseq 9;7;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. 35423 extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_550552147 refseq 13;8;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae 303K extrachromosomal linear Cluster_427 Gammaproteobacteria_gi_550654326-106476-130137 hallmark;refseq 29;21;4;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Dickeya Dickeya sp. D s0432-1 prophage linear Cluster_0 Gammaproteobacteria_gi_550692755-0-30817 hallmark;refseq 32;29;2;1 Viruses;unclassified;unclassified;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. 36618 prophage linear Cluster_1 Gammaproteobacteria_gi_550693473 refseq 21;21;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. 36618 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_550693532 refseq 19;19;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. 36618 extrachromosomal linear Cluster_82 Gammaproteobacteria_gi_550701492 hallmark;refseq 31;18;8;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas sp. CMAA1215 extrachromosomal linear Cluster_18 Gammaproteobacteria_gi_550707702 hallmark;refseq 51;28;9;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas sp. CMAA1215 extrachromosomal linear Cluster_85 Gammaproteobacteria_gi_550708930 hallmark;refseq 34;20;5;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas sp. CMAA1215 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_550710773-746663-754244 hallmark;refseq 12;11;;1 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae HC-36A1 prophage linear Cluster_14 Gammaproteobacteria_gi_550711952-1498003-1553973 hallmark;refseq 71;45;8;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Spbetalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae BIDMC 12C prophage linear Cluster_148 Gammaproteobacteria_gi_550712221-2045433-2089580 hallmark;refseq 62;29;17;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli BWH 24 prophage linear Cluster_0 Gammaproteobacteria_gi_550712221-2756494-2796661 hallmark;refseq 54;49;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli BWH 24 prophage linear Cluster_7 Gammaproteobacteria_gi_550713573-4583114-4597252 hallmark;refseq 17;15;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli BIDMC 19C prophage linear Cluster_22 Gammaproteobacteria_gi_550713573-4627623-4670435 hallmark;refseq;vdb 56;44;8;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli BIDMC 19C prophage linear Cluster_1 Gammaproteobacteria_gi_550713573-558672-602209 hallmark;refseq 57;42;14;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli BIDMC 19C prophage linear Cluster_1 Gammaproteobacteria_gi_550766529-3194803-3235349 hallmark;refseq 56;50;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Enterobacter Enterobacter sp. MGH 8 prophage linear Cluster_4 Gammaproteobacteria_gi_550766611-28341-112394 hallmark;refseq 100;95;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Enterobacter Enterobacter sp. MGH 8 prophage linear Cluster_9 Gammaproteobacteria_gi_550796365-1791038-1832170 hallmark;refseq 56;47;3;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Enterobacter Enterobacter sp. MGH 14 prophage linear Cluster_4 Gammaproteobacteria_gi_550796365-2133859-2181810 hallmark;refseq 81;61;6;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Enterobacter Enterobacter sp. MGH 14 prophage linear Cluster_23 Gammaproteobacteria_gi_550796365-3490252-3537771 hallmark;refseq 66;58;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Enterobacter Enterobacter sp. MGH 14 prophage linear Cluster_18 Gammaproteobacteria_gi_550859108-0-10493 hallmark;refseq;vdb 11;9;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. 47.E.09 prophage linear Cluster_22 Gammaproteobacteria_gi_550862720 hallmark;refseq 38;23;10;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. 47.E.09 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_550894146-21932-37915 hallmark;refseq 18;15;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. CDC_2009K1288 prophage linear Cluster_22 Gammaproteobacteria_gi_550904034-97781-133941 hallmark;refseq 39;36;2;1 Viruses;unclassified;unclassified;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. CDC_2009K1158 prophage linear Cluster_1 Gammaproteobacteria_gi_550907057-97878-134039 hallmark;refseq 41;37;2;2 Viruses;unclassified;unclassified;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. CDC_2009K1283 prophage linear Cluster_1 Gammaproteobacteria_gi_550909710 hallmark;refseq 22;20;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. CDC_2009K1277 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_550910429-33533-75897 hallmark;refseq 56;55;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. CDC_2009K1277 prophage linear Cluster_3 Gammaproteobacteria_gi_550910509 hallmark;refseq 21;20;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. CDC_2009K1277 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_551320344 hallmark;refseq 61;23;12;26 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Alteromonadales;Psychromonadaceae;Psychromonas Psychromonas hadalis ATCC BAA-638 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_551351102 hallmark;refseq 34;19;2;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Arenimonas Arenimonas oryziterrae DSM 21050 = YC6267 extrachromosomal linear Cluster_311 Gammaproteobacteria_gi_551605010 hallmark;refseq 16;13;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis 9 extrachromosomal linear Cluster_18 Gammaproteobacteria_gi_551605030 refseq 15;10;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis 9 extrachromosomal linear Cluster_27 Gammaproteobacteria_gi_551609895 hallmark;refseq 16;13;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis S3 extrachromosomal linear Cluster_18 Gammaproteobacteria_gi_551609911 refseq 15;9;1;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis S3 extrachromosomal linear Cluster_27 Gammaproteobacteria_gi_551614669 hallmark;refseq 16;13;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis 24H extrachromosomal linear Cluster_18 Gammaproteobacteria_gi_551614692 refseq 15;9;1;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis 24H extrachromosomal linear Cluster_27 Gammaproteobacteria_gi_551719536 noncaudo;vdb 4;;1;3 Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter sp. RUH2624 extrachromosomal linear Cluster_594 Gammaproteobacteria_gi_552546038-63456-73348 hallmark;noncaudo 14;5;3;6 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Oceanospirillales;Halomonadaceae;Halomonas Halomonas sp. PBN3 prophage linear Cluster_527 Gammaproteobacteria_gi_552743884 hallmark;refseq 17;14;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis 113 extrachromosomal linear Cluster_18 Gammaproteobacteria_gi_552743933 refseq 14;8;1;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis 113 extrachromosomal linear Cluster_27 Gammaproteobacteria_gi_552943184 hallmark;refseq 30;15;11;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Photorhabdus Photorhabdus temperata J3 extrachromosomal linear Cluster_22 Gammaproteobacteria_gi_552944798 hallmark;refseq 15;11;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Photorhabdus Photorhabdus temperata J3 extrachromosomal linear Cluster_47 Gammaproteobacteria_gi_552945216 hallmark;refseq 25;16;1;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Photorhabdus Photorhabdus temperata J3 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_552950990 hallmark 70;21;9;40 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas putida SJ3 extrachromosomal linear Cluster_592 Gammaproteobacteria_gi_553728073-489-42604 hallmark;refseq 55;45;1;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli SCD1 prophage linear Cluster_1 Gammaproteobacteria_gi_553728353-5623-45353 hallmark;refseq;vdb 55;35;13;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli SCD1 prophage linear Cluster_3 Gammaproteobacteria_gi_553728873 hallmark;refseq 23;17;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli SCD2 extrachromosomal linear Cluster_26 Gammaproteobacteria_gi_553729057 hallmark;refseq 16;12;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli SCD2 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_553749912-591032-602923 refseq 14;11;1;2 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa CF77 prophage linear Cluster_13 Gammaproteobacteria_gi_553750688-2659511-2667301 refseq 10;9;;1 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa C52 prophage linear Cluster_13 Gammaproteobacteria_gi_553750688-638108-701661 hallmark;refseq;vdb 96;66;8;22 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa C52 prophage linear Cluster_64 Gammaproteobacteria_gi_553750692 noncaudo 3;2;1; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa C52 extrachromosomal linear Cluster_175 Gammaproteobacteria_gi_553750972-471625-482290 refseq 13;11;;2 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa C51 prophage linear Cluster_13 Gammaproteobacteria_gi_553750975-172914-222509 hallmark;refseq 68;51;4;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa C51 prophage linear Cluster_120 Gammaproteobacteria_gi_553750979 refseq 15;13;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa C51 extrachromosomal linear Cluster_164 Gammaproteobacteria_gi_553752009-623491-630016 noncaudo 8;7;;1 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa C48 prophage linear Cluster_13 Gammaproteobacteria_gi_553752011-637-5175 refseq 7;5;;2 Viruses;unclassified phages;unknown;unknown;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa C48 prophage linear Cluster_13 Gammaproteobacteria_gi_553753101-2061664-2104605 hallmark;refseq 68;50;1;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa C41 prophage linear Cluster_7 Gammaproteobacteria_gi_553753101-715890-723560 noncaudo 14;9;1;4 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa C41 prophage linear Cluster_13 Gammaproteobacteria_gi_553753102-0-11549 noncaudo 14;9;2;3 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa C41 prophage linear Cluster_13 Gammaproteobacteria_gi_553754081-1852057-1899770 hallmark;refseq 64;54;1;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa C40 prophage linear Cluster_120 Gammaproteobacteria_gi_553754082-456740-465757 noncaudo 13;9;2;2 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa C40 prophage linear Cluster_13 Gammaproteobacteria_gi_553755193-4657576-4665800 noncaudo 11;8;;3 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa C23 prophage linear Cluster_13 Gammaproteobacteria_gi_553755229-4683144-4691368 noncaudo 11;8;;3 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa C20 prophage linear Cluster_13 Gammaproteobacteria_gi_553756151-692-10404 noncaudo 13;5;;8 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa M9A.1 prophage linear Cluster_14 Gammaproteobacteria_gi_553756153-1288095-1299429 noncaudo 14;8;;6 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa M9A.1 prophage linear Cluster_13 Gammaproteobacteria_gi_553756153-1811408-1822750 refseq 14;10;;4 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa M9A.1 prophage linear Cluster_13 Gammaproteobacteria_gi_553756153-779597-790249 noncaudo 14;9;;5 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa M9A.1 prophage linear Cluster_13 Gammaproteobacteria_gi_553757909-3013439-3050238 hallmark;refseq 49;33;5;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa M8A.3 prophage linear Cluster_0 Gammaproteobacteria_gi_553757912 noncaudo 12;4;;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa M8A.3 extrachromosomal linear Cluster_13 Gammaproteobacteria_gi_553757991-3468571-3478238 noncaudo 13;8;;5 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa M8A.2 prophage linear Cluster_13 Gammaproteobacteria_gi_553757992-550243-587042 hallmark;refseq 49;33;5;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa M8A.2 prophage linear Cluster_0 Gammaproteobacteria_gi_553757994-52498-65248 refseq 17;10;;7 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa M8A.2 prophage linear Cluster_13 Gammaproteobacteria_gi_553758907-1272951-1285608 noncaudo 15;8;1;6 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa M8A.1 prophage linear Cluster_13 Gammaproteobacteria_gi_553758907-1799091-1814925 refseq 18;10;2;6 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa M8A.1 prophage linear Cluster_13 Gammaproteobacteria_gi_553760403-1889527-1959861 hallmark;refseq;vdb 69;49;7;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BL25 prophage linear Cluster_233 Gammaproteobacteria_gi_553760403-3117093-3128983 noncaudo 15;8;2;5 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BL25 prophage linear Cluster_13 Gammaproteobacteria_gi_553760774-1881547-1919195 hallmark;refseq 49;39;3;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BL24 prophage linear Cluster_0 Gammaproteobacteria_gi_553760774-2029083-2038267 noncaudo 12;6;;6 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BL24 prophage linear Cluster_13 Gammaproteobacteria_gi_553760774-2572147-2582812 refseq 13;11;;2 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BL24 prophage linear Cluster_13 Gammaproteobacteria_gi_553760776 noncaudo 6;3;2;1 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BL24 extrachromosomal linear Cluster_163 Gammaproteobacteria_gi_553761406 noncaudo 12;3;2;7 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BL23 extrachromosomal linear Cluster_175 Gammaproteobacteria_gi_553761413-682861-712778 hallmark;refseq 36;22;10;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BL23 prophage linear Cluster_0 Gammaproteobacteria_gi_553761414-366895-377277 noncaudo 13;9;1;3 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BL23 prophage linear Cluster_13 Gammaproteobacteria_gi_553762034-1785769-1793646 noncaudo 12;7;;5 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BL22 prophage linear Cluster_13 Gammaproteobacteria_gi_553762038-414047-438897 hallmark;refseq 29;23;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BL22 prophage linear Cluster_59 Gammaproteobacteria_gi_553762041 noncaudo 13;3;;10 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BL22 extrachromosomal circular Cluster_14 Gammaproteobacteria_gi_553762605-4629213-4638259 noncaudo 13;9;;4 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BL21 prophage linear Cluster_13 Gammaproteobacteria_gi_553762607-53701-69461 noncaudo 20;7;1;12 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BL21 prophage linear Cluster_13 Gammaproteobacteria_gi_553764059-1231693-1242376 noncaudo 13;9;1;3 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BL20 prophage linear Cluster_13 Gammaproteobacteria_gi_553764059-2031-8932 hallmark;noncaudo 13;3;1;9 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BL20 prophage linear Cluster_14 Gammaproteobacteria_gi_553764846-1855089-1910334 hallmark;refseq 76;49;8;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BL19 prophage linear Cluster_18 Gammaproteobacteria_gi_553766108-4762775-4771734 noncaudo 13;10;1;2 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BL18 prophage linear Cluster_13 Gammaproteobacteria_gi_553766646-5245762-5282161 hallmark;refseq 50;50;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BL17 prophage linear Cluster_59 Gammaproteobacteria_gi_553766884-33017-40289 noncaudo 9;7;1;1 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BL16 prophage linear Cluster_13 Gammaproteobacteria_gi_553766886-1248763-1259100 noncaudo 14;10;1;3 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BL16 prophage linear Cluster_13 Gammaproteobacteria_gi_553766886-1653760-1675256 hallmark;refseq 29;24;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BL16 prophage linear Cluster_164 Gammaproteobacteria_gi_553768117-126719-134724 noncaudo 12;9;1;2 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BL15 prophage linear Cluster_13 Gammaproteobacteria_gi_553769602-603214-680866 hallmark;refseq 81;62;7;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BL13 prophage linear Cluster_0 Gammaproteobacteria_gi_553770258 hallmark;refseq 64;43;10;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BL12 extrachromosomal linear Cluster_100 Gammaproteobacteria_gi_553770270-829139-866560 hallmark;refseq 55;54;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BL12 prophage linear Cluster_59 Gammaproteobacteria_gi_553770272-319853-328752 noncaudo 12;9;;3 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BL12 prophage linear Cluster_13 Gammaproteobacteria_gi_553770698-2331095-2370650 hallmark;refseq 54;46;;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BL11 prophage linear Cluster_100 Gammaproteobacteria_gi_553770701 noncaudo 12;2;3;7 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BL11 extrachromosomal circular Cluster_163 Gammaproteobacteria_gi_553771596-1778263-1786451 noncaudo 11;8;1;2 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BL10 prophage linear Cluster_13 Gammaproteobacteria_gi_553771848-441008-451691 noncaudo 14;9;1;4 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BL09 prophage linear Cluster_13 Gammaproteobacteria_gi_553771851 refseq 18;16;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BL09 extrachromosomal linear Cluster_164 Gammaproteobacteria_gi_553772211-915319-957830 hallmark;refseq 66;41;5;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BL08 prophage linear Cluster_83 Gammaproteobacteria_gi_553772214-118688-181900 hallmark;refseq;vdb 95;63;7;25 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BL08 prophage linear Cluster_64 Gammaproteobacteria_gi_553773138-1492483-1532038 hallmark;refseq 54;46;;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BL06 prophage linear Cluster_100 Gammaproteobacteria_gi_553773942-4092679-4103124 noncaudo 14;8;;6 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BL05 prophage linear Cluster_13 Gammaproteobacteria_gi_553773942-4619031-4631204 noncaudo 14;8;2;4 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BL05 prophage linear Cluster_13 Gammaproteobacteria_gi_553776598-1554356-1560418 noncaudo 7;6;1; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BL04 prophage linear Cluster_13 Gammaproteobacteria_gi_553776601-452439-461618 refseq 13;9;1;3 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BL04 prophage linear Cluster_13 Gammaproteobacteria_gi_553776604-225119-253761 hallmark;refseq 41;41;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BL04 prophage linear Cluster_59 Gammaproteobacteria_gi_553776605-122460-132558 refseq 14;10;;4 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BL04 prophage linear Cluster_13 Gammaproteobacteria_gi_553776605-199115-227757 hallmark;refseq 41;41;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BL04 prophage linear Cluster_59 Gammaproteobacteria_gi_553777448 hallmark;refseq 52;52;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BL03 extrachromosomal linear Cluster_59 Gammaproteobacteria_gi_553777756-1252298-1260522 noncaudo 11;8;;3 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BL02 prophage linear Cluster_13 Gammaproteobacteria_gi_553777756-2423420-2435087 noncaudo 13;9;2;2 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BL02 prophage linear Cluster_13 Gammaproteobacteria_gi_553777756-543382-581999 hallmark;refseq 58;55;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BL02 prophage linear Cluster_59 Gammaproteobacteria_gi_553777758-1058139-1107563 hallmark;refseq 69;47;5;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BL02 prophage linear Cluster_120 Gammaproteobacteria_gi_553778836-4815065-4821026 noncaudo 8;6;1;1 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BL01 prophage linear Cluster_13 Gammaproteobacteria_gi_553778837-449200-460998 refseq 13;11;1;1 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BL01 prophage linear Cluster_13 Gammaproteobacteria_gi_553779497 noncaudo 12;2;1;9 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BWHPSA028 extrachromosomal circular Cluster_163 Gammaproteobacteria_gi_553779664-3654794-3665266 noncaudo 13;10;1;2 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BWHPSA027 prophage linear Cluster_13 Gammaproteobacteria_gi_553779664-474-25283 hallmark;refseq 30;22;2;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BWHPSA027 prophage linear Cluster_83 Gammaproteobacteria_gi_553779665-618706-629689 noncaudo 13;9;2;2 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BWHPSA027 prophage linear Cluster_13 Gammaproteobacteria_gi_553782012-62556-70770 noncaudo 13;9;;4 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BWHPSA025 prophage linear Cluster_13 Gammaproteobacteria_gi_553782014-454695-466195 noncaudo 13;8;1;4 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BWHPSA025 prophage linear Cluster_13 Gammaproteobacteria_gi_553782332-4185421-4191015 noncaudo 7;6;1; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BWHPSA024 prophage linear Cluster_13 Gammaproteobacteria_gi_553782333-116885-127375 noncaudo 14;8;1;5 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BWHPSA024 prophage linear Cluster_13 Gammaproteobacteria_gi_553782516-1680374-1688598 noncaudo 11;8;;3 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BWHPSA023 prophage linear Cluster_13 Gammaproteobacteria_gi_553782525-580812-592479 noncaudo 13;9;2;2 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BWHPSA023 prophage linear Cluster_13 Gammaproteobacteria_gi_553783571 hallmark;refseq 29;21;1;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BWHPSA022 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_553784282-4047292-4061640 noncaudo 19;10;2;7 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BWHPSA021 prophage linear Cluster_13 Gammaproteobacteria_gi_553785891-1670041-1681276 noncaudo 13;8;1;4 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BWHPSA019 prophage linear Cluster_13 Gammaproteobacteria_gi_553785891-2198600-2209313 noncaudo 14;11;2;1 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BWHPSA019 prophage linear Cluster_13 Gammaproteobacteria_gi_553786820-2259001-2268979 noncaudo 15;10;;5 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BWHPSA018 prophage linear Cluster_13 Gammaproteobacteria_gi_553786826 hallmark;refseq 72;45;3;24 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BWHPSA018 extrachromosomal circular Cluster_217 Gammaproteobacteria_gi_553786827 hallmark;refseq 29;27;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BWHPSA018 extrachromosomal linear Cluster_21 Gammaproteobacteria_gi_553786910-2053012-2062196 noncaudo 12;6;;6 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BWHPSA017 prophage linear Cluster_13 Gammaproteobacteria_gi_553786910-2596244-2606909 refseq 13;11;;2 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BWHPSA017 prophage linear Cluster_13 Gammaproteobacteria_gi_553786913 noncaudo 9;2;;7 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BWHPSA017 extrachromosomal linear Cluster_163 Gammaproteobacteria_gi_553787890-449723-461373 refseq 14;10;2;2 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BWHPSA016 prophage linear Cluster_13 Gammaproteobacteria_gi_553788646-1895722-1906340 noncaudo 14;10;2;2 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BWHPSA015 prophage linear Cluster_13 Gammaproteobacteria_gi_553788832-458067-469710 noncaudo 14;10;2;2 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BWHPSA014 prophage linear Cluster_13 Gammaproteobacteria_gi_553789793-1314960-1329308 noncaudo 18;10;2;6 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BWHPSA012 prophage linear Cluster_13 Gammaproteobacteria_gi_553790679-102935-144121 hallmark;refseq 64;47;;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BWHPSA010 prophage linear Cluster_164 Gammaproteobacteria_gi_553790684 hallmark;refseq 50;37;3;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BWHPSA010 extrachromosomal linear Cluster_120 Gammaproteobacteria_gi_553790686 hallmark;refseq 33;25;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BWHPSA010 extrachromosomal linear Cluster_120 Gammaproteobacteria_gi_553790695-610845-645347 hallmark;refseq 52;34;2;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BWHPSA010 prophage linear Cluster_217 Gammaproteobacteria_gi_553791396-4809244-4817109 noncaudo 11;9;1;1 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BWHPSA009 prophage linear Cluster_13 Gammaproteobacteria_gi_553791396-5339731-5359544 noncaudo 15;9;4;2 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BWHPSA009 prophage linear Cluster_13 Gammaproteobacteria_gi_553791396-5508935-5517453 noncaudo 12;9;;3 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BWHPSA009 prophage linear Cluster_13 Gammaproteobacteria_gi_553792172-2562315-2569798 noncaudo 11;8;2;1 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BWHPSA008 prophage linear Cluster_13 Gammaproteobacteria_gi_553792173-2721958-2760872 hallmark;refseq 53;48;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BWHPSA008 prophage linear Cluster_100 Gammaproteobacteria_gi_553792751-2178710-2188251 noncaudo 14;6;;8 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BWHPSA007 prophage linear Cluster_13 Gammaproteobacteria_gi_553792752-467587-504281 hallmark;refseq 53;53;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BWHPSA007 prophage linear Cluster_59 Gammaproteobacteria_gi_553793170-4577715-4585963 noncaudo 12;9;;3 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BWHPSA005 prophage linear Cluster_13 Gammaproteobacteria_gi_553793171-122530-133020 noncaudo 14;8;1;5 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BWHPSA005 prophage linear Cluster_13 Gammaproteobacteria_gi_553793172-563069-571211 noncaudo 10;8;2; Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BWHPSA005 prophage linear Cluster_13 Gammaproteobacteria_gi_553793254-3510797-3522150 noncaudo 13;9;;4 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BWHPSA004 prophage linear Cluster_13 Gammaproteobacteria_gi_553793254-4695655-4725904 noncaudo 11;7;;4 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BWHPSA004 prophage linear Cluster_13 Gammaproteobacteria_gi_553793256 noncaudo 4;2;1;1 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BWHPSA004 extrachromosomal linear Cluster_13 Gammaproteobacteria_gi_553793360-1954053-1963237 noncaudo 12;6;;6 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BWHPSA003 prophage linear Cluster_13 Gammaproteobacteria_gi_553793361-523409-531172 noncaudo 11;8;;3 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BWHPSA003 prophage linear Cluster_13 Gammaproteobacteria_gi_553793364 noncaudo 9;3;1;5 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BWHPSA003 extrachromosomal linear Cluster_175 Gammaproteobacteria_gi_553793547-134845-197959 hallmark;refseq;vdb 100;66;9;25 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BWHPSA002 prophage linear Cluster_64 Gammaproteobacteria_gi_553793550-475870-486535 refseq 13;11;;2 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa BWHPSA002 prophage linear Cluster_13 Gammaproteobacteria_gi_553794124-454044-470056 noncaudo 21;8;1;12 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa X13273 prophage linear Cluster_13 Gammaproteobacteria_gi_553794126-73844-111927 hallmark;refseq 58;57;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa X13273 prophage linear Cluster_59 Gammaproteobacteria_gi_553794290-1091552-1103114 refseq 13;10;1;2 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa S35004 prophage linear Cluster_13 Gammaproteobacteria_gi_553794294 hallmark;refseq 67;50;3;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa S35004 extrachromosomal circular Cluster_120 Gammaproteobacteria_gi_553794295 noncaudo 12;3;2;7 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa S35004 extrachromosomal linear Cluster_163 Gammaproteobacteria_gi_553794552-4209918-4252193 hallmark;refseq 65;41;5;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa 6077 prophage linear Cluster_83 Gammaproteobacteria_gi_553796619-1153480-1163313 refseq 14;10;1;3 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa 19660 prophage linear Cluster_13 Gammaproteobacteria_gi_553796622-0-20879 hallmark;refseq 26;21;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa 19660 prophage linear Cluster_0 Gammaproteobacteria_gi_553796927-1389568-1432125 hallmark;refseq 66;38;1;27 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa U2504 prophage linear Cluster_164 Gammaproteobacteria_gi_553796931-415-36568 hallmark;refseq 51;49;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa U2504 prophage linear Cluster_59 Gammaproteobacteria_gi_553796934-415-36568 hallmark;refseq 51;49;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa U2504 prophage linear Cluster_59 Gammaproteobacteria_gi_553797347-0-26703 hallmark;refseq 34;27;3;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa S54485 prophage linear Cluster_59 Gammaproteobacteria_gi_553797347-2267867-2276907 noncaudo 13;9;;4 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa S54485 prophage linear Cluster_13 Gammaproteobacteria_gi_553797347-2922663-2960568 hallmark;refseq 54;36;4;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa S54485 prophage linear Cluster_0 Gammaproteobacteria_gi_553797347-2960518-2974778 hallmark;refseq 19;8;1;10 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa S54485 prophage linear Cluster_13 Gammaproteobacteria_gi_553797347-3081646-3108373 hallmark;refseq 34;27;3;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa S54485 prophage linear Cluster_59 Gammaproteobacteria_gi_553797349-199099-209825 noncaudo 14;9;1;4 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa S54485 prophage linear Cluster_13 Gammaproteobacteria_gi_553797353 hallmark;refseq 55;40;4;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa S54485 extrachromosomal linear Cluster_100 Gammaproteobacteria_gi_553797354 hallmark;refseq 54;40;4;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa S54485 extrachromosomal linear Cluster_100 Gammaproteobacteria_gi_553798049-57656-68604 noncaudo 16;9;1;6 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa UDL prophage linear Cluster_13 Gammaproteobacteria_gi_553798897-4097661-4108467 noncaudo 16;9;;7 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa X24509 prophage linear Cluster_13 Gammaproteobacteria_gi_553798899-541147-550001 noncaudo 12;8;3;1 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa X24509 prophage linear Cluster_13 Gammaproteobacteria_gi_553800142-1318701-1327573 noncaudo 14;6;;8 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa CF5 prophage linear Cluster_13 Gammaproteobacteria_gi_553801004-1755716-1766483 noncaudo 16;9;;7 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa CF27 prophage linear Cluster_13 Gammaproteobacteria_gi_553801006 noncaudo 9;2;2;5 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa CF27 extrachromosomal circular Cluster_175 Gammaproteobacteria_gi_553801190-451413-463264 refseq 13;9;2;2 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa CF18 prophage linear Cluster_13 Gammaproteobacteria_gi_553801299-1857978-1907240 hallmark;refseq 68;48;4;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa CF127 prophage linear Cluster_120 Gammaproteobacteria_gi_553801300-563575-574240 refseq 13;11;;2 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa CF127 prophage linear Cluster_13 Gammaproteobacteria_gi_553801304 noncaudo 12;2;1;9 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa CF127 extrachromosomal linear Cluster_163 Gammaproteobacteria_gi_553801351-792391-801154 noncaudo 11;7;1;3 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa MSH10 prophage linear Cluster_13 Gammaproteobacteria_gi_553801353 refseq 7;6;;1 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa MSH10 extrachromosomal linear Cluster_13 Gammaproteobacteria_gi_553801404 refseq 6;5;;1 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa MSH3 extrachromosomal linear Cluster_13 Gammaproteobacteria_gi_553801405 refseq 5;4;;1 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa MSH3 extrachromosomal linear Cluster_13 Gammaproteobacteria_gi_553801406 noncaudo 4;3;;1 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa MSH3 extrachromosomal linear Cluster_13 Gammaproteobacteria_gi_553801647 noncaudo 12;3;3;6 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa E2 extrachromosomal circular Cluster_175 Gammaproteobacteria_gi_553802497-2134814-2145021 noncaudo 16;9;1;6 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa 62 prophage linear Cluster_13 Gammaproteobacteria_gi_553802497-2661775-2670943 noncaudo 12;9;1;2 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa 62 prophage linear Cluster_13 Gammaproteobacteria_gi_553805658-51-12358 hallmark;refseq 10;8;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. 409753-6 prophage linear Cluster_0 Gammaproteobacteria_gi_553805704-21704-49917 hallmark;refseq 38;32;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. 409753-6 prophage linear Cluster_0 Gammaproteobacteria_gi_553805856 hallmark;refseq 100;71;16;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. 620239 extrachromosomal linear Cluster_28 Gammaproteobacteria_gi_553805909-134495-157552 hallmark;refseq 33;29;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. 620239 prophage linear Cluster_0 Gammaproteobacteria_gi_553805929-91-11982 hallmark;refseq;vdb 10;7;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. 620239 prophage linear Cluster_0 Gammaproteobacteria_gi_553806185 hallmark;refseq 48;43;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. 557928 extrachromosomal linear Cluster_11 Gammaproteobacteria_gi_553806233 hallmark;refseq 29;23;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. 557928 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_553806283 refseq 17;13;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. 557928 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_553806397 hallmark;refseq 34;17;15;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. 557928 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_553806407-44060-66200 hallmark;refseq 28;17;8;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. 467481 prophage linear Cluster_0 Gammaproteobacteria_gi_553806587-42-10181 hallmark;refseq 10;9;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. 432613 prophage linear Cluster_0 Gammaproteobacteria_gi_553807218-13312-43149 hallmark;refseq 41;35;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. 266757-1 prophage linear Cluster_0 Gammaproteobacteria_gi_553807464 refseq 16;11;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Muenster str. 660 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_553841430 hallmark;refseq 35;28;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Muenster str. 660 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_553855939-387631-431490 hallmark;refseq 69;40;20;9 Viruses;unclassified;unclassified;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Saintpaul str. 9712 prophage linear Cluster_28 Gammaproteobacteria_gi_553862461 hallmark;refseq 34;31;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Rissen str. 150 extrachromosomal linear Cluster_11 Gammaproteobacteria_gi_553865997-3324-45472 hallmark;refseq 50;39;6;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Rissen str. 150 prophage linear Cluster_1 Gammaproteobacteria_gi_553869480-75901-95367 hallmark;refseq 29;26;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Rissen str. 150 prophage linear Cluster_0 Gammaproteobacteria_gi_553874479 hallmark;refseq 23;21;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella "Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. 08-1700" extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_553877205 hallmark;refseq 21;20;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella "Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. 08-1700" extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_553901511 hallmark;refseq 57;35;10;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella "Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. 08-1739" extrachromosomal linear Cluster_54 Gammaproteobacteria_gi_553928093-0-41081 hallmark;refseq 43;34;8;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Javiana str. ATCC BAA-1593 prophage linear Cluster_2 Gammaproteobacteria_gi_553928243-79058-109229 hallmark;refseq 38;35;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Javiana str. ATCC BAA-1593 prophage linear Cluster_0 Gammaproteobacteria_gi_553958106 refseq 25;24;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 110957 extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_553958130 hallmark;refseq 18;13;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 110957 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_553958154-106335-148299 hallmark;refseq 55;49;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 110957 prophage linear Cluster_7 Gammaproteobacteria_gi_553958179 hallmark;refseq 30;18;6;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 110957 extrachromosomal linear Cluster_26 Gammaproteobacteria_gi_553958193 hallmark;refseq 18;16;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Punalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 110957 extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_553958246 refseq 19;18;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 110957 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_553958279 refseq 20;20;; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 110957 extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_553958285-2225-14477 hallmark;refseq 16;15;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 110957 prophage linear Cluster_1 Gammaproteobacteria_gi_553958291 hallmark;refseq 18;12;6; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 110957 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_553958296 hallmark;refseq 16;13;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 110957 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_553959631-8039-27017 hallmark;refseq 22;17;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 113290 prophage linear Cluster_26 Gammaproteobacteria_gi_553959678 hallmark;refseq 32;28;1;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 113290 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_553959696 hallmark;refseq 96;85;3;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 113290 extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_553959776 hallmark;refseq 24;19;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 113290 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_553960754 hallmark;refseq 32;28;1;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 113303 extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_553960785 hallmark;refseq 34;32;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 113303 extrachromosomal linear Cluster_11 Gammaproteobacteria_gi_553960787 refseq 52;48;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 113303 extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_553960789-27060-40589 hallmark;refseq 16;13;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 113303 prophage linear Cluster_22 Gammaproteobacteria_gi_553961529-23341-56210 hallmark;refseq 41;34;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 907357 prophage linear Cluster_0 Gammaproteobacteria_gi_553961569 hallmark;refseq 20;18;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 907357 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_553961573 hallmark;refseq 104;92;3;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 907357 extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_553962559 hallmark;refseq 103;97;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 907713 extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_553962601-181-38840 hallmark;refseq 54;47;2;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 907713 prophage linear Cluster_7 Gammaproteobacteria_gi_553962644 hallmark;refseq 26;17;8;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 907713 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_553962650 hallmark;refseq 14;12;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 907713 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_553964401 hallmark;refseq 40;23;2;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 907713 extrachromosomal linear Cluster_23 Gammaproteobacteria_gi_553988353 hallmark;refseq 44;40;1;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 907779 extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_553988735-17565-59820 hallmark;refseq 59;28;15;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 907779 prophage linear Cluster_0 Gammaproteobacteria_gi_553996030-379433-428059 hallmark;refseq;vdb 69;53;6;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 907779 prophage linear Cluster_11 Gammaproteobacteria_gi_553998107 hallmark;refseq 31;22;6;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 907779 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_553998884 hallmark;refseq 23;18;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 907779 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_554000965 refseq 39;36;;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 907779 extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_554094318-22697-32886 hallmark;refseq 10;8;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 909945-2 prophage linear Cluster_0 Gammaproteobacteria_gi_554133057 hallmark;refseq 27;23;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Punalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 909945-2 extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_554223748 refseq 10;9;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Punalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 909945-2 extrachromosomal linear Cluster_19 Gammaproteobacteria_gi_554233303 hallmark;refseq 33;28;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 909945-2 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_554246781-0-33879 hallmark;refseq 53;48;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 909945-2 prophage linear Cluster_3 Gammaproteobacteria_gi_554496810 hallmark;refseq 50;27;7;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 909957 extrachromosomal linear Cluster_39 Gammaproteobacteria_gi_554496818-24732-80798 hallmark;refseq 72;43;7;22 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 909957 prophage linear Cluster_26 Gammaproteobacteria_gi_554496898-27242-73632 hallmark;refseq 45;35;2;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 909957 prophage linear Cluster_1 Gammaproteobacteria_gi_554499194-3442114-3473179 hallmark;refseq;vdb 43;27;8;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia "Yersinia enterocolitica (type O:5,27) str. YE149/02" prophage linear Cluster_3 Gammaproteobacteria_gi_554499379-103660-127175 hallmark;refseq 23;16;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia enterocolitica (type O:3) str. YE12/03 prophage linear Cluster_0 Gammaproteobacteria_gi_554627005-16817-30803 hallmark;refseq;vdb 17;14;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. SA-4 prophage linear Cluster_0 Gammaproteobacteria_gi_554627929-169930-188898 hallmark;refseq 21;17;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Senftenberg str. 361154004 prophage linear Cluster_22 Gammaproteobacteria_gi_554629021 hallmark;refseq 13;11;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Senftenberg str. 423984-1 extrachromosomal linear Cluster_22 Gammaproteobacteria_gi_554631734 refseq 17;15;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. 0292 extrachromosomal linear Cluster_252 Gammaproteobacteria_gi_554631768 hallmark;refseq 30;27;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. 0292 extrachromosomal linear Cluster_11 Gammaproteobacteria_gi_554632068 refseq 31;26;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. 0292 extrachromosomal linear Cluster_23 Gammaproteobacteria_gi_554632134-28891-68988 hallmark;refseq;vdb 49;37;9;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. 0292 prophage linear Cluster_0 Gammaproteobacteria_gi_554632372-10183-36280 hallmark;refseq 35;24;7;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. SA-1 prophage linear Cluster_0 Gammaproteobacteria_gi_554632436-23466-39298 hallmark;refseq 18;15;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. SA-1 prophage linear Cluster_22 Gammaproteobacteria_gi_554633235-23479-38196 hallmark;refseq 17;14;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. RI_10P078 prophage linear Cluster_22 Gammaproteobacteria_gi_554633299 hallmark;refseq 56;38;8;10 Viruses;unclassified;unclassified;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. RI_10P078 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_554633666-0-16597 hallmark;refseq 20;16;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. RI_10P068 prophage linear Cluster_22 Gammaproteobacteria_gi_554633702 hallmark;refseq 45;31;7;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. RI_10P068 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_554633957-35208-51307 hallmark;refseq 19;16;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. WA_14900 prophage linear Cluster_22 Gammaproteobacteria_gi_554634010 hallmark;refseq 42;28;6;8 Viruses;unclassified;unclassified;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. WA_14900 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_554634163 hallmark;refseq 15;10;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. WA_14900 extrachromosomal linear Cluster_82 Gammaproteobacteria_gi_554634180 refseq 16;9;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. WA_14900 extrachromosomal linear Cluster_225 Gammaproteobacteria_gi_554640811-1264-42009 hallmark;refseq 53;30;7;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. WA_14885 prophage linear Cluster_82 Gammaproteobacteria_gi_554646242-49337-64050 hallmark;refseq 18;14;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. WA_14882 prophage linear Cluster_22 Gammaproteobacteria_gi_554647405 hallmark;refseq 32;25;2;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. WA_14882 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_554651150 refseq 15;9;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. WA_14881 extrachromosomal linear Cluster_225 Gammaproteobacteria_gi_554651202 refseq 10;8;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. WA_14881 extrachromosomal linear Cluster_47 Gammaproteobacteria_gi_554658895 hallmark;refseq 42;30;6;6 Viruses;unclassified;unclassified;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. VA_R100512572 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_554659045 hallmark;refseq 46;27;5;14 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. VA_R100512572 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_554661998 hallmark;refseq 31;24;2;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. VA_R100512570 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_554662293 refseq 22;13;6;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. VA_R100512570 extrachromosomal linear Cluster_225 Gammaproteobacteria_gi_554662425 refseq 10;5;3;2 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. VA_R100512570 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_554663412-169923-188891 hallmark;refseq 21;17;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Senftenberg str. NC_MB012510-0038 prophage linear Cluster_22 Gammaproteobacteria_gi_554665103-53249-88432 hallmark;refseq 45;39;2;4 Viruses;unclassified;unclassified;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Heidelberg str. SARA35 prophage linear Cluster_2 Gammaproteobacteria_gi_554667199 hallmark;refseq 35;29;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Heidelberg str. 82-2052 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_554667415-6172-49163 hallmark;refseq 53;46;2;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Heidelberg str. 82-2052 prophage linear Cluster_2 Gammaproteobacteria_gi_554668218-0-21246 hallmark;refseq 29;25;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Heidelberg str. 24390 prophage linear Cluster_0 Gammaproteobacteria_gi_554668229-186-41587 hallmark;refseq 57;47;4;6 Viruses;unclassified;unclassified;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Heidelberg str. 24390 prophage linear Cluster_1 Gammaproteobacteria_gi_554668865 refseq 19;15;;4 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. AZ 057 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_554669325-0-10989 hallmark;refseq 13;12;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. AZ 057 prophage linear Cluster_0 Gammaproteobacteria_gi_554669670-79915-90080 hallmark;refseq 10;10;; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. AZ 057 prophage linear Cluster_0 Gammaproteobacteria_gi_554670118 hallmark;refseq 19;18;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. AZ 057 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_554670212 hallmark;refseq 15;15;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. AZ 057 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_554670426 refseq 18;18;; Viruses;unclassified phages;;;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. AZ 057 extrachromosomal linear Cluster_82 Gammaproteobacteria_gi_554670518-0-11137 hallmark;refseq 14;9;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. AZ 057 prophage linear Cluster_0 Gammaproteobacteria_gi_554673136 hallmark;refseq 17;16;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. ST4581 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_554673373-18721-37335 hallmark;refseq 21;16;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. ST4581 prophage linear Cluster_22 Gammaproteobacteria_gi_554673986 hallmark;refseq 39;36;3; Viruses;unclassified phages;;;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. ST4581 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_554677205-17055-55788 hallmark;refseq;vdb 50;33;8;9 Viruses;unclassified;unclassified;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella "Salmonella enterica subsp. salamae serovar 58:l,z13,z28:z6 str. 00-0163" prophage linear Cluster_3 Gammaproteobacteria_gi_554679910-8056-47115 hallmark;refseq 49;48;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Saintpaul str. SARA26 prophage linear Cluster_7 Gammaproteobacteria_gi_554681077 hallmark;refseq 61;34;8;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Saintpaul str. SARA26 extrachromosomal linear Cluster_82 Gammaproteobacteria_gi_554681162-2248-38597 hallmark;refseq 53;48;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Saintpaul str. SARA26 prophage linear Cluster_11 Gammaproteobacteria_gi_554681304-20646-37387 hallmark;refseq 18;15;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Paratyphi B str. SARA62 prophage linear Cluster_22 Gammaproteobacteria_gi_554684723-63041-77588 hallmark;refseq 18;15;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella "Salmonella enterica subsp. indica serovar 6,14,25:z10:1,(2),7 str. 1121" prophage linear Cluster_22 Gammaproteobacteria_gi_554684795-41975-77035 hallmark;refseq 44;37;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella "Salmonella enterica subsp. indica serovar 6,14,25:z10:1,(2),7 str. 1121" prophage linear Cluster_0 Gammaproteobacteria_gi_554684932-139500-166988 hallmark;refseq 31;26;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella "Salmonella enterica subsp. indica serovar 6,14,25:z10:1,(2),7 str. 1121" prophage linear Cluster_1 Gammaproteobacteria_gi_554685354 hallmark;refseq 33;15;8;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella "Salmonella enterica subsp. indica serovar 6,14,25:z10:1,(2),7 str. 1121" extrachromosomal linear Cluster_48 Gammaproteobacteria_gi_554685601-8820-39275 hallmark;refseq 41;36;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella "Salmonella enterica subsp. indica serovar 6,14,25:z10:1,(2),7 str. 1121" prophage linear Cluster_0 Gammaproteobacteria_gi_554686383 hallmark;refseq 18;11;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella "Salmonella enterica subsp. houtenae serovar 50:g,z51:- str. 01-0133" extrachromosomal linear Cluster_26 Gammaproteobacteria_gi_554686524 refseq 15;11;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella "Salmonella enterica subsp. houtenae serovar 50:g,z51:- str. 01-0133" extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_554690932-35307-46990 hallmark;refseq 13;10;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella "Salmonella enterica subsp. houtenae serovar 50:g,z51:- str. 01-0133" prophage linear Cluster_0 Gammaproteobacteria_gi_554691131 hallmark;refseq 29;25;4; Viruses;unclassified;unclassified;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella "Salmonella enterica subsp. houtenae serovar 50:g,z51:- str. 01-0133" extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_554895970-1207675-1255348 hallmark;refseq 54;43;7;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000189 prophage linear Cluster_1 Gammaproteobacteria_gi_554922084 hallmark;refseq 28;23;4;1 Viruses;unclassified phages;;;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Worthington str. ATCC 9607 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_554922277 hallmark;refseq 38;29;7;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Worthington str. ATCC 9607 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_554923963 hallmark;refseq 15;15;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Virchow str. ATCC 51955 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_554924447-78501-89682 hallmark;refseq 13;11;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Virchow str. ATCC 51955 prophage linear Cluster_22 Gammaproteobacteria_gi_554924806-44998-85823 hallmark;refseq 56;46;9;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Urbana str. ATCC 9261 prophage linear Cluster_3 Gammaproteobacteria_gi_554925257 hallmark;refseq 68;57;4;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Urbana str. ATCC 9261 extrachromosomal linear Cluster_158 Gammaproteobacteria_gi_554926239-83403-125935 hallmark;refseq 53;46;2;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Muenchen str. ATCC 8388 prophage linear Cluster_2 Gammaproteobacteria_gi_554926810 hallmark;refseq 14;13;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. SARA13 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_554926853 refseq 15;13;2; Viruses;unclassified phages;;;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. SARA13 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_554926880-22570-37552 hallmark;refseq 17;14;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Thompson str. ATCC 8391 prophage linear Cluster_22 Gammaproteobacteria_gi_554927159 hallmark;refseq 14;12;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Tennessee str. TXSC_TXSC08-21 extrachromosomal linear Cluster_11 Gammaproteobacteria_gi_554927475 refseq 13;10;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Tennessee str. TXSC_TXSC08-21 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_554942259-51798-66779 hallmark;refseq 17;14;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Tennessee str. TXSC_TXSC08-21 prophage linear Cluster_22 Gammaproteobacteria_gi_554943948 hallmark;refseq 20;18;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Tennessee str. TXSC_TXSC08-21 extrachromosomal linear Cluster_23 Gammaproteobacteria_gi_554944489 refseq 36;31;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Tennessee str. TXSC_TXSC08-21 extrachromosomal linear Cluster_23 Gammaproteobacteria_gi_554951650-28673-67034 hallmark;refseq 61;52;2;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Tennessee str. TXSC_TXSC08-19 prophage linear Cluster_11 Gammaproteobacteria_gi_554952795-0-13234 hallmark;refseq 15;12;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Tennessee str. TXSC_TXSC08-19 prophage linear Cluster_22 Gammaproteobacteria_gi_554954572 hallmark;refseq 28;27;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Tennessee str. TXSC_TXSC08-19 extrachromosomal linear Cluster_23 Gammaproteobacteria_gi_554954945 hallmark;refseq 41;39;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Tallahassee str. 0012 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_554955485 hallmark;refseq 22;11;8;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Tallahassee str. 0012 extrachromosomal linear Cluster_28 Gammaproteobacteria_gi_554955588-13673-30078 hallmark;refseq 19;15;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Tallahassee str. 0012 prophage linear Cluster_22 Gammaproteobacteria_gi_554955617-2361-18669 refseq 19;15;1;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Tallahassee str. 0012 prophage linear Cluster_17 Gammaproteobacteria_gi_554955672-0-25511 hallmark;refseq 46;43;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Tallahassee str. 0012 prophage linear Cluster_23 Gammaproteobacteria_gi_554956026 hallmark;refseq 30;25;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Tallahassee str. 0012 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_554956500 refseq 26;15;6;5 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Sloterdijk str. ATCC 15791 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_554959014 hallmark;refseq 30;21;6;3 Viruses;unclassified phages;;;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Stanley str. ATCC 7308 extrachromosomal linear Cluster_28 Gammaproteobacteria_gi_554959480-5953-36657 hallmark;refseq 40;35;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Stanley str. ATCC 7308 prophage linear Cluster_0 Gammaproteobacteria_gi_554960274-17910-36973 hallmark;refseq 23;18;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Senftenberg str. 604314 prophage linear Cluster_22 Gammaproteobacteria_gi_554960338-0-37610 hallmark;refseq 55;51;1;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Senftenberg str. ATCC 43845 prophage linear Cluster_23 Gammaproteobacteria_gi_554960438-60459-96600 hallmark;refseq;vdb 49;38;5;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Senftenberg str. ATCC 43845 prophage linear Cluster_3 Gammaproteobacteria_gi_554960463-51624-68352 hallmark;refseq 18;15;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Senftenberg str. ATCC 43845 prophage linear Cluster_22 Gammaproteobacteria_gi_554961649 hallmark;refseq 16;13;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Soerenga str. 695 extrachromosomal linear Cluster_11 Gammaproteobacteria_gi_554961825-43746-60870 hallmark;refseq 25;22;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Soerenga str. 695 prophage linear Cluster_0 Gammaproteobacteria_gi_554962371-15609-31191 hallmark;refseq 24;22;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Soerenga str. 695 prophage linear Cluster_0 Gammaproteobacteria_gi_554964600 refseq 15;13;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Paratyphi B str. SARA42 extrachromosomal linear Cluster_482 Gammaproteobacteria_gi_554964852 refseq 15;8;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Paratyphi B str. ATCC 51962 extrachromosomal linear Cluster_225 Gammaproteobacteria_gi_554964937-7061-37243 hallmark;refseq 42;34;4;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Paratyphi B str. ATCC 51962 prophage linear Cluster_0 Gammaproteobacteria_gi_554965704 hallmark;refseq 34;27;3;4 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Paratyphi B str. ATCC 51962 extrachromosomal linear Cluster_54 Gammaproteobacteria_gi_554966542-251441-322728 hallmark;refseq 96;83;6;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Paratyphi B str. ATCC 19940 prophage linear Cluster_0 Gammaproteobacteria_gi_554966802-5-31341 hallmark;refseq 47;26;16;5 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Paratyphi B str. ATCC 8759 prophage linear Cluster_28 Gammaproteobacteria_gi_554966834 hallmark;refseq 52;49;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Paratyphi B str. ATCC 8759 extrachromosomal linear Cluster_11 Gammaproteobacteria_gi_554966906-80063-110861 hallmark;refseq 40;35;5; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Paratyphi B str. ATCC 8759 prophage linear Cluster_0 Gammaproteobacteria_gi_554967194 hallmark;refseq 22;14;5;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Paratyphi B str. ATCC 10719 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_554971022-343630-360371 hallmark;refseq 18;15;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Paratyphi B str. ATCC BAA-1585 prophage linear Cluster_22 Gammaproteobacteria_gi_555220240 hallmark;refseq 89;43;27;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Poona str. ATCC BAA-1673 extrachromosomal linear Cluster_48 Gammaproteobacteria_gi_555220252-66384-87654 hallmark;refseq 29;25;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Poona str. ATCC BAA-1673 prophage linear Cluster_0 Gammaproteobacteria_gi_555220328-44376-82170 hallmark;refseq 51;48;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Poona str. ATCC BAA-1673 prophage linear Cluster_3 Gammaproteobacteria_gi_555220639 hallmark;refseq 28;14;9;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Poona str. ATCC BAA-1673 extrachromosomal linear Cluster_39 Gammaproteobacteria_gi_555220672 hallmark;refseq 46;40;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Poona str. ATCC BAA-1673 extrachromosomal linear Cluster_11 Gammaproteobacteria_gi_555222193-0-16593 hallmark;refseq 21;20;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Oranienburg str. 701 prophage linear Cluster_0 Gammaproteobacteria_gi_555228400-0-21515 hallmark;refseq;vdb 42;37;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Meleagridis str. 0047 prophage linear Cluster_23 Gammaproteobacteria_gi_555228488-46233-61985 hallmark;refseq 19;15;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Meleagridis str. 0047 prophage linear Cluster_22 Gammaproteobacteria_gi_555230398-37496-67908 hallmark;refseq 41;37;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Montevideo str. 8387 prophage linear Cluster_0 Gammaproteobacteria_gi_555230979 hallmark;refseq 36;29;3;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Mbandaka str. ATCC 51958 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_555231971 hallmark 13;4;5;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Mbandaka str. ATCC 51958 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_555232269 hallmark;refseq 54;32;7;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Mbandaka str. ATCC 51958 extrachromosomal linear Cluster_21 Gammaproteobacteria_gi_555232893 refseq 24;15;4;5 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Miami str. 1923 extrachromosomal linear Cluster_47 Gammaproteobacteria_gi_555233189 hallmark;refseq 15;15;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Miami str. 1923 extrachromosomal linear Cluster_54 Gammaproteobacteria_gi_555233851-0-16442 hallmark;refseq 19;14;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Miami str. 1923 prophage linear Cluster_10 Gammaproteobacteria_gi_555234179 hallmark;refseq 42;36;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Muenchen str. baa1674 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_555235684-24517-41663 hallmark;refseq 19;16;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Senftenberg str. 316235162 prophage linear Cluster_22 Gammaproteobacteria_gi_555236446 hallmark;refseq 115;93;7;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Muenchen str. baa1594 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_555236478 hallmark;refseq 49;21;19;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Muenchen str. baa1594 extrachromosomal linear Cluster_28 Gammaproteobacteria_gi_555236623-0-19287 hallmark;refseq 26;16;1;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Muenchen str. baa1594 prophage linear Cluster_0 Gammaproteobacteria_gi_555236675 hallmark;refseq 20;18;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Muenchen str. baa1594 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_555236757 refseq 23;17;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Muenchen str. baa1594 extrachromosomal linear Cluster_19 Gammaproteobacteria_gi_555236931-7012-19831 hallmark;refseq 10;7;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Muenchen str. baa1594 prophage linear Cluster_0 Gammaproteobacteria_gi_555237110 hallmark;refseq 45;33;1;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Muenchen str. baa1594 extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_555237262-108647-137147 hallmark;refseq 24;18;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Muenchen str. baa1594 prophage linear Cluster_5 Gammaproteobacteria_gi_555237492-0-15721 hallmark;refseq 18;15;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Muenchen str. baa1594 prophage linear Cluster_22 Gammaproteobacteria_gi_555237908-0-20661 hallmark;refseq 29;25;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Muenster str. 420 prophage linear Cluster_0 Gammaproteobacteria_gi_555238015-2817-25986 hallmark;refseq 32;29;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Muenster str. 420 prophage linear Cluster_0 Gammaproteobacteria_gi_555238182-0-20661 hallmark;refseq 29;25;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Muenster str. 0315 prophage linear Cluster_0 Gammaproteobacteria_gi_555238239 refseq 27;27;; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Muenster str. 0315 extrachromosomal linear Cluster_23 Gammaproteobacteria_gi_555238326 hallmark;refseq 32;26;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Muenster str. 0315 extrachromosomal linear Cluster_23 Gammaproteobacteria_gi_555238366 hallmark;refseq 39;35;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Muenster str. 0315 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_555238394 hallmark;refseq 35;27;7;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Muenster str. 0315 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_555238512-129635-170779 hallmark;refseq 51;43;7;1 Viruses;unclassified;unclassified;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Muenster str. 0315 prophage linear Cluster_1 Gammaproteobacteria_gi_555238540 refseq 23;20;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Muenster str. 0315 extrachromosomal linear Cluster_23 Gammaproteobacteria_gi_555238600-10409-38353 hallmark 39;13;4;22 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;T4likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Kentucky str. ATCC 9263 prophage linear Cluster_518 Gammaproteobacteria_gi_555239856-10190-25184 hallmark;refseq 18;14;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Kentucky str. ATCC 9263 prophage linear Cluster_22 Gammaproteobacteria_gi_555240667 hallmark;refseq 24;16;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Kentucky str. 5349 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_555240779 hallmark 34;11;7;16 Viruses;unclassified phages;;;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Javiana str. 10721 extrachromosomal linear Cluster_82 Gammaproteobacteria_gi_555241133 hallmark;refseq 22;16;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Javiana str. 10721 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_555241427-0-26328 hallmark;refseq 35;28;2;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Javiana str. 10721 prophage linear Cluster_482 Gammaproteobacteria_gi_555241619 hallmark;refseq 38;34;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Javiana str. PRS_2010_0720 extrachromosomal linear Cluster_11 Gammaproteobacteria_gi_555241670 hallmark;refseq 13;13;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Javiana str. PRS_2010_0720 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_555241679-2751-51056 hallmark;refseq 56;44;1;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Javiana str. PRS_2010_0720 prophage linear Cluster_16 Gammaproteobacteria_gi_555241746 refseq 23;21;2; Viruses;unclassified phages;;;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Javiana str. PRS_2010_0720 extrachromosomal linear Cluster_82 Gammaproteobacteria_gi_555241789 refseq 34;29;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Javiana str. PRS_2010_0720 extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_555241882 hallmark;refseq 31;26;2;3 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Javiana str. PRS_2010_0720 extrachromosomal linear Cluster_54 Gammaproteobacteria_gi_555241925 refseq 10;7;3; Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Javiana str. PRS_2010_0720 extrachromosomal linear Cluster_224 Gammaproteobacteria_gi_555241967-2781-33329 hallmark;refseq 40;36;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Javiana str. PRS_2010_0720 prophage linear Cluster_0 Gammaproteobacteria_gi_555243724 hallmark;refseq 21;18;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Inverness str. ATCC 10720 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_555243747 hallmark;refseq 42;19;11;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Inverness str. ATCC 10720 extrachromosomal linear Cluster_48 Gammaproteobacteria_gi_555244504-166631-182430 hallmark;refseq 18;15;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Hadar str. ATCC 51956 prophage linear Cluster_22 Gammaproteobacteria_gi_555244601 hallmark;refseq 56;45;2;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Hadar str. ATCC 51956 extrachromosomal linear Cluster_47 Gammaproteobacteria_gi_555245017 hallmark;refseq 18;16;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Gaminara str. ATCC BAA-711 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_555245267 hallmark;refseq 34;20;4;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Gaminara str. ATCC BAA-711 extrachromosomal linear Cluster_21 Gammaproteobacteria_gi_555245341 hallmark;refseq 33;16;10;7 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Gaminara str. ATCC BAA-711 extrachromosomal linear Cluster_28 Gammaproteobacteria_gi_555245436 hallmark;refseq 18;9;2;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Gaminara str. ATCC BAA-711 extrachromosomal linear Cluster_134 Gammaproteobacteria_gi_555245702 hallmark;refseq 23;19;3;1 Viruses;unclassified;unclassified;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Gaminara str. ATCC BAA-711 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_555245893 hallmark;refseq 20;19;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Gaminara str. ATCC BAA-711 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_555246522-69910-100080 hallmark;refseq 38;35;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Gaminara str. ATCC BAA-711 prophage linear Cluster_0 Gammaproteobacteria_gi_555246568-18566-37105 hallmark;refseq 30;28;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Gaminara str. ATCC BAA-711 prophage linear Cluster_11 Gammaproteobacteria_gi_555246645-47736-59311 hallmark;refseq 15;13;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Gaminara str. ATCC BAA-711 prophage linear Cluster_22 Gammaproteobacteria_gi_555247017-2382-31835 hallmark;refseq 37;24;7;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Give str. 564 prophage linear Cluster_0 Gammaproteobacteria_gi_555247099-0-41808 hallmark;refseq 54;43;3;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Give str. 564 prophage linear Cluster_4 Gammaproteobacteria_gi_555247383 hallmark;refseq 16;14;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Derby str. 626 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_555249306-3753-37841 hallmark;refseq 44;35;6;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Chester str. ATCC 11997 prophage linear Cluster_0 Gammaproteobacteria_gi_555249617-778-34694 hallmark;refseq 45;41;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Chester str. ATCC 11997 prophage linear Cluster_3 Gammaproteobacteria_gi_555251352 refseq 14;13;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Choleraesuis str. ATCC 10708 extrachromosomal linear Cluster_47 Gammaproteobacteria_gi_555251404 hallmark;refseq 47;37;9;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Choleraesuis str. ATCC 10708 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_555251689-97635-124708 hallmark;refseq 34;18;11;5 Viruses;unclassified phages;unknown;unknown;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Choleraesuis str. ATCC 10708 prophage linear Cluster_28 Gammaproteobacteria_gi_555252422 hallmark;refseq 38;18;14;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Choleraesuis str. 0006 extrachromosomal linear Cluster_28 Gammaproteobacteria_gi_555252826-7962-24597 hallmark;refseq 26;17;5;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Choleraesuis str. 0006 prophage linear Cluster_22 Gammaproteobacteria_gi_555253117 refseq 20;18;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Choleraesuis str. 0006 extrachromosomal linear Cluster_47 Gammaproteobacteria_gi_555253222 hallmark;refseq 52;40;10;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Choleraesuis str. 0006 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_555254481-126000-164937 hallmark;refseq 53;42;4;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Bareilly str. ATCC 9115 prophage linear Cluster_2 Gammaproteobacteria_gi_555254610-149897-199619 hallmark;refseq 83;75;2;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Bareilly str. ATCC 9115 prophage linear Cluster_23 Gammaproteobacteria_gi_555254795 hallmark;refseq 41;28;9;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Berta str. ATCC 8392 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_555254823-70945-96001 hallmark;refseq 36;31;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Berta str. ATCC 8392 prophage linear Cluster_1 Gammaproteobacteria_gi_555255209-42954-77541 hallmark;refseq 45;38;3;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Berta str. ATCC 8392 prophage linear Cluster_0 Gammaproteobacteria_gi_555257012-10164-25973 hallmark;refseq 21;16;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Bareilly str. 2780 prophage linear Cluster_22 Gammaproteobacteria_gi_555257025 refseq;vdb 15;8;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Bareilly str. 2780 extrachromosomal linear Cluster_230 Gammaproteobacteria_gi_555257197 refseq 14;8;1;5 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000200 extrachromosomal linear Cluster_224 Gammaproteobacteria_gi_555257638-49684-66415 hallmark;refseq 18;15;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000197 prophage linear Cluster_22 Gammaproteobacteria_gi_555258163 hallmark;refseq 37;27;6;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000197 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_555258192 refseq 13;11;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000197 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_555258573-64472-97301 hallmark;refseq 40;33;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000183 prophage linear Cluster_11 Gammaproteobacteria_gi_555259014 hallmark;refseq 45;34;4;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. 648586-1 extrachromosomal linear Cluster_11 Gammaproteobacteria_gi_555259113-38874-51181 hallmark;refseq 10;8;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. 419639 2-1 prophage linear Cluster_0 Gammaproteobacteria_gi_555259122-0-21738 hallmark;refseq 32;26;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. 419639 2-1 prophage linear Cluster_0 Gammaproteobacteria_gi_555260182-111861-126841 hallmark;refseq 17;14;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Albany str. ATCC 51960 prophage linear Cluster_22 Gammaproteobacteria_gi_555260370-34601-45775 hallmark;refseq 10;8;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. ATCC 51957 prophage linear Cluster_0 Gammaproteobacteria_gi_555260667 hallmark;refseq 49;30;10;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. 632182-2 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_555261532 hallmark;refseq 12;8;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Anatum str. ATCC BAA-1592 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_555262035 refseq 18;15;2;1 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Anatum str. ATCC BAA-1592 extrachromosomal linear Cluster_47 Gammaproteobacteria_gi_555262343 hallmark;refseq 28;25;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Anatum str. USDA 100 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_555262404-0-32958 hallmark;refseq 46;36;6;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Anatum str. USDA 100 prophage linear Cluster_0 Gammaproteobacteria_gi_555263308 refseq 19;11;5;3 Viruses;unclassified phages;;;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Abony str. 0014 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_555263591-27238-68649 hallmark;refseq 62;59;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Abony str. 0014 prophage linear Cluster_11 Gammaproteobacteria_gi_555264796-7675-33194 hallmark;refseq 37;32;5; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella "Salmonella enterica subsp. diarizonae serovar 60:r:e,n,x,z15 str. 01-0170" prophage linear Cluster_0 Gammaproteobacteria_gi_555264907 hallmark;refseq 33;17;2;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella "Salmonella enterica subsp. diarizonae serovar 60:r:e,n,x,z15 str. 01-0170" extrachromosomal linear Cluster_18 Gammaproteobacteria_gi_555265496 hallmark;refseq 26;14;4;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella "Salmonella enterica subsp. diarizonae serovar 60:r:e,n,x,z15 str. 01-0170" extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_555267539-12098-26547 hallmark;refseq;vdb 13;10;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella "Salmonella enterica subsp. diarizonae serovar 60:r:e,n,x,z15 str. 01-0170" prophage linear Cluster_0 Gammaproteobacteria_gi_555268340 hallmark;refseq 33;19;11;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Nchanga str. CFSAN001092 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_555268629 refseq 24;19;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Nchanga str. CFSAN001092 extrachromosomal linear Cluster_82 Gammaproteobacteria_gi_555269549 hallmark 31;13;12;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Nchanga str. CFSAN001092 extrachromosomal linear Cluster_28 Gammaproteobacteria_gi_555269585 hallmark;refseq 20;18;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Nchanga str. CFSAN001092 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_555269933 hallmark;refseq 42;37;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Nchanga str. CFSAN001092 extrachromosomal linear Cluster_11 Gammaproteobacteria_gi_555270314 hallmark;refseq 42;37;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Nchanga str. CFSAN001091 extrachromosomal linear Cluster_11 Gammaproteobacteria_gi_555270617 hallmark;refseq 33;19;11;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Nchanga str. CFSAN001091 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_555270637 refseq 28;23;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Nchanga str. CFSAN001091 extrachromosomal linear Cluster_82 Gammaproteobacteria_gi_555271173 hallmark;refseq 39;20;11;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Nchanga str. CFSAN001091 extrachromosomal linear Cluster_28 Gammaproteobacteria_gi_555271326 refseq 22;20;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Eastbourne str. CFSAN001084 extrachromosomal linear Cluster_82 Gammaproteobacteria_gi_555272024 hallmark;refseq 32;27;4;1 Viruses;unclassified;unclassified;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Eastbourne str. CFSAN001084 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_555272352 hallmark;refseq;vdb 35;24;8;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Eastbourne str. CFSAN001084 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_555272665-0-10952 hallmark;refseq 13;11;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Cubana str. CFSAN001083 prophage linear Cluster_22 Gammaproteobacteria_gi_555273080 refseq 11;8;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Cubana str. CFSAN001083 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_555274374 refseq 10;9;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Cubana str. CFSAN001083 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_555274575 hallmark;refseq 36;32;;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Cubana str. CFSAN001083 extrachromosomal linear Cluster_23 Gammaproteobacteria_gi_555275070-28675-58237 hallmark;refseq 37;34;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Havana str. CFSAN001082 prophage linear Cluster_0 Gammaproteobacteria_gi_555275603-10629-50290 hallmark;refseq 53;51;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Havana str. CFSAN001082 prophage linear Cluster_23 Gammaproteobacteria_gi_555281271 hallmark;refseq 49;41;4;4 Viruses;unclassified phages;;;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Bredeney str. CFSAN001080 extrachromosomal linear Cluster_54 Gammaproteobacteria_gi_555282843 refseq 17;15;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Ohio str. CFSAN001079 extrachromosomal linear Cluster_23 Gammaproteobacteria_gi_555283723-44-32607 hallmark;refseq 42;39;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Ohio str. CFSAN001079 prophage linear Cluster_11 Gammaproteobacteria_gi_555283966 hallmark;refseq 41;36;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Manhattan str. CFSAN001078 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_555284589 hallmark;refseq 20;14;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Manhattan str. CFSAN001078 extrachromosomal linear Cluster_22 Gammaproteobacteria_gi_555284798-13190-23941 hallmark;refseq 13;13;; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Manhattan str. CFSAN001078 prophage linear Cluster_3 Gammaproteobacteria_gi_555284926 hallmark;refseq 67;58;1;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Manhattan str. CFSAN001078 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_555285161-166585-203447 hallmark;refseq 48;38;4;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Norwich str. CFSAN001077 prophage linear Cluster_0 Gammaproteobacteria_gi_555285209 hallmark;refseq 26;21;3;2 Viruses;unclassified;unclassified;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Norwich str. CFSAN001077 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_555285884-52166-68493 hallmark;refseq 18;15;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Norwich str. CFSAN001077 prophage linear Cluster_22 Gammaproteobacteria_gi_555286310 hallmark;refseq 68;52;4;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Norwich str. CFSAN001077 extrachromosomal linear Cluster_54 Gammaproteobacteria_gi_555286962-793-42879 hallmark;refseq 57;33;14;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Litchfield str. CFSAN001076 prophage linear Cluster_28 Gammaproteobacteria_gi_555287229 hallmark;refseq 12;11;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Litchfield str. CFSAN001076 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_555287300 hallmark;refseq 61;41;11;9 Viruses;unclassified;unclassified;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Litchfield str. CFSAN001076 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_555287429-109460-126414 hallmark;refseq 18;15;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Hartford str. CFSAN001075 prophage linear Cluster_22 Gammaproteobacteria_gi_555287500-25-41570 hallmark;refseq 52;39;9;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Hartford str. CFSAN001075 prophage linear Cluster_1 Gammaproteobacteria_gi_555288815 hallmark;refseq 31;24;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Abaetetuba str. ATCC 35640 extrachromosomal linear Cluster_82 Gammaproteobacteria_gi_555533761 hallmark 54;19;6;29 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter brisouii CIP 110357 extrachromosomal circular Cluster_369 Gammaproteobacteria_gi_555565347-2065079-2096180 hallmark;refseq 42;28;7;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 50 (4-2593475) prophage linear Cluster_3 Gammaproteobacteria_gi_555565347-2149933-2187620 hallmark;refseq 58;50;2;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 50 (4-2593475) prophage linear Cluster_3 Gammaproteobacteria_gi_555565347-373664-422028 hallmark;refseq 72;64;4;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 50 (4-2593475) prophage linear Cluster_18 Gammaproteobacteria_gi_555573616-230306-268689 hallmark;refseq 61;53;4;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 98 (4-5799287) prophage linear Cluster_3 Gammaproteobacteria_gi_555578523-578552-622453 hallmark;refseq 57;42;12;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3336-1 prophage linear Cluster_1 Gammaproteobacteria_gi_555580856-0-31408 hallmark;refseq 42;40;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3426-1 prophage linear Cluster_3 Gammaproteobacteria_gi_555583745-735-5699 hallmark;noncaudo 8;3;1;4 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3426-1 prophage linear Cluster_36 Gammaproteobacteria_gi_555585557 hallmark;refseq 10;7;;3 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3426-1 extrachromosomal linear Cluster_36 Gammaproteobacteria_gi_555587871-0-6721 hallmark;noncaudo 10;4;2;4 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3290-1 prophage linear Cluster_36 Gammaproteobacteria_gi_555589513-1093659-1134421 hallmark;refseq 55;50;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3290-1 prophage linear Cluster_7 Gammaproteobacteria_gi_555591494-175437-214313 hallmark;refseq 49;38;4;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3290-1 prophage linear Cluster_2 Gammaproteobacteria_gi_555591496 hallmark;noncaudo 8;4;;4 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3290-1 extrachromosomal linear Cluster_36 Gammaproteobacteria_gi_555592227-102-19687 hallmark;refseq 22;15;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3693-1 prophage linear Cluster_0 Gammaproteobacteria_gi_555592241-367630-388782 hallmark;refseq 24;17;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3693-1 prophage linear Cluster_0 Gammaproteobacteria_gi_555592580-1338623-1378626 hallmark;refseq 54;49;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3323-1 prophage linear Cluster_7 Gammaproteobacteria_gi_555592580-864112-895521 hallmark;refseq 39;34;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3323-1 prophage linear Cluster_0 Gammaproteobacteria_gi_555592719-13172-43554 hallmark;refseq 42;36;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3323-1 prophage linear Cluster_0 Gammaproteobacteria_gi_555592767 refseq 14;7;2;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3342-1 extrachromosomal circular Cluster_48 Gammaproteobacteria_gi_555593295 hallmark;refseq 46;21;9;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3342-1 extrachromosomal linear Cluster_48 Gammaproteobacteria_gi_556090783-389-39263 hallmark;refseq 57;42;4;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Serratia Serratia sp. ATCC 39006 prophage linear Cluster_137 Gammaproteobacteria_gi_556195968 hallmark;refseq 56;46;6;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae BIDMC 41 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_556196033 refseq 55;42;5;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae BIDMC 41 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_556198190-3589071-3625312 hallmark;refseq 40;36;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli BIDMC 39 prophage linear Cluster_0 Gammaproteobacteria_gi_556198190-371431-406291 hallmark;refseq 46;39;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli BIDMC 39 prophage linear Cluster_0 Gammaproteobacteria_gi_556198881-2042351-2084605 hallmark;refseq 59;28;15;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli BIDMC 38 prophage linear Cluster_0 Gammaproteobacteria_gi_556243487-2774713-2815853 hallmark;refseq 57;43;;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae BIDMC 24 prophage linear Cluster_7 Gammaproteobacteria_gi_556266251-1329234-1365848 hallmark;refseq 41;25;4;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae BIDMC 22 prophage linear Cluster_0 Gammaproteobacteria_gi_556275227 hallmark;refseq 114;90;11;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae BIDMC 21 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_556314587-223954-244540 hallmark;refseq 36;28;2;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Enterobacter Enterobacter cloacae UCICRE 12 prophage linear Cluster_3 Gammaproteobacteria_gi_556328063-3010679-3035200 hallmark;refseq 26;19;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Enterobacter Enterobacter cloacae UCICRE 11 prophage linear Cluster_17 Gammaproteobacteria_gi_556328063-648589-696455 hallmark;refseq 64;52;3;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Enterobacter Enterobacter cloacae UCICRE 11 prophage linear Cluster_18 Gammaproteobacteria_gi_556328063-728434-758834 hallmark;refseq 39;29;4;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Enterobacter Enterobacter cloacae UCICRE 11 prophage linear Cluster_0 Gammaproteobacteria_gi_556366593-2983700-3027266 hallmark;refseq 67;53;6;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UCICRE 8 prophage linear Cluster_247 Gammaproteobacteria_gi_556398877-1928390-1970793 hallmark;refseq 56;36;7;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Enterobacter Enterobacter cloacae UCICRE 5 prophage linear Cluster_0 Gammaproteobacteria_gi_556398877-3306951-3354885 hallmark;refseq 66;48;9;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Enterobacter Enterobacter cloacae UCICRE 5 prophage linear Cluster_21 Gammaproteobacteria_gi_556403725-2651056-2698189 hallmark;refseq 75;58;2;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UCICRE 4 prophage linear Cluster_54 Gammaproteobacteria_gi_556417786-2006795-2047543 hallmark;refseq 62;47;4;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Enterobacter Enterobacter cloacae UCICRE 3 prophage linear Cluster_4 Gammaproteobacteria_gi_556417786-2654455-2702114 hallmark;refseq 75;54;7;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Enterobacter Enterobacter cloacae UCICRE 3 prophage linear Cluster_25 Gammaproteobacteria_gi_556422501-3214257-3273495 hallmark;refseq 75;52;6;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae UCICRE 2 prophage linear Cluster_26 Gammaproteobacteria_gi_556423242-692280-730751 hallmark;refseq 55;44;8;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli BWH 32 prophage linear Cluster_3 Gammaproteobacteria_gi_556426767-3346990-3389832 hallmark;refseq 56;36;8;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Enterobacter Enterobacter cloacae BWH 31 prophage linear Cluster_0 Gammaproteobacteria_gi_556426780 hallmark;refseq 15;8;2;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Enterobacter Enterobacter cloacae BWH 31 extrachromosomal linear Cluster_44 Gammaproteobacteria_gi_556447892-1674402-1714894 hallmark;refseq 58;36;6;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae BWH 30 prophage linear Cluster_4 Gammaproteobacteria_gi_556464165-1470019-1496079 hallmark;refseq 42;30;2;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Enterobacter Enterobacter cloacae BWH 29 prophage linear Cluster_18 Gammaproteobacteria_gi_556464165-59410-107485 hallmark;refseq 77;60;5;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Enterobacter Enterobacter cloacae BWH 29 prophage linear Cluster_25 Gammaproteobacteria_gi_556469196-2288020-2330979 hallmark;refseq 56;39;8;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella oxytoca MGH 42 prophage linear Cluster_2 Gammaproteobacteria_gi_556471373-3036596-3063409 hallmark;refseq 33;24;2;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae MGH 40 prophage linear Cluster_0 Gammaproteobacteria_gi_556472568-10232-40134 hallmark;refseq 39;31;4;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Enterobacter Enterobacter sp. MGH 38 prophage linear Cluster_0 Gammaproteobacteria_gi_556477195-3037211-3076562 hallmark;refseq 60;46;4;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae MGH 30 prophage linear Cluster_37 Gammaproteobacteria_gi_556478622-23071-104461 hallmark;refseq 99;95;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Enterobacter Enterobacter sp. MGH 26 prophage linear Cluster_9 Gammaproteobacteria_gi_556481255-4455595-4499057 hallmark;refseq 58;41;5;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Enterobacter Enterobacter sp. MGH 25 prophage linear Cluster_4 Gammaproteobacteria_gi_556481255-879873-926321 hallmark;refseq 57;43;4;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Enterobacter Enterobacter sp. MGH 25 prophage linear Cluster_4 Gammaproteobacteria_gi_556481330 hallmark 22;8;4;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Enterobacter Enterobacter sp. MGH 25 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_556488729-242666-271385 hallmark;refseq 40;35;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Enterobacter Enterobacter sp. MGH 24 prophage linear Cluster_0 Gammaproteobacteria_gi_556488729-710509-746668 hallmark;refseq;vdb 42;31;8;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Enterobacter Enterobacter sp. MGH 24 prophage linear Cluster_0 Gammaproteobacteria_gi_556491303-1914347-1956432 hallmark;refseq 55;45;5;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Enterobacter Enterobacter sp. MGH 22 prophage linear Cluster_4 Gammaproteobacteria_gi_556491303-2612109-2643035 hallmark;refseq 40;33;3;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Enterobacter Enterobacter sp. MGH 22 prophage linear Cluster_0 Gammaproteobacteria_gi_556491654 hallmark;refseq 14;14;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae MGH 21 extrachromosomal linear Cluster_47 Gammaproteobacteria_gi_556493183-1172525-1208950 hallmark;refseq 40;25;5;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae MGH 20 prophage linear Cluster_0 Gammaproteobacteria_gi_556493183-273839-318621 hallmark;refseq 68;47;6;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae MGH 20 prophage linear Cluster_25 Gammaproteobacteria_gi_556495303-2971089-3013109 hallmark;refseq 55;38;9;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae MGH 18 prophage linear Cluster_4 Gammaproteobacteria_gi_556495408 refseq 46;35;3;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae MGH 17 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_556495416 hallmark;refseq 72;64;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Klebsiella Klebsiella pneumoniae MGH 17 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_556497781-907889-944040 hallmark;refseq 53;41;2;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Enterobacter Enterobacter sp. MGH 16 prophage linear Cluster_3 Gammaproteobacteria_gi_556497781-952920-979866 hallmark;refseq 37;25;5;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Enterobacter Enterobacter sp. MGH 16 prophage linear Cluster_1 Gammaproteobacteria_gi_556506383-880677-912813 hallmark;refseq 40;36;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 12 (4-7653042) prophage linear Cluster_0 Gammaproteobacteria_gi_556506425 hallmark;refseq 106;91;6;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 12 (4-7653042) extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_556506500 hallmark;refseq 105;95;4;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 86 (4-7026218) extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_556506651 hallmark;refseq 63;47;10;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 108 (4-6924867) extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_556506688 hallmark;refseq 109;98;4;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 108 (4-6924867) extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_556506806-1382881-1424076 hallmark;refseq 56;50;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 108 (4-6924867) prophage linear Cluster_7 Gammaproteobacteria_gi_556506840-276983-309548 hallmark;refseq 45;28;16;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 108 (4-6924867) prophage linear Cluster_1 Gammaproteobacteria_gi_556506960 hallmark;refseq 104;96;1;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 136 (4-5970458) extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_556507027-1074634-1105140 hallmark;refseq 41;35;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 148 (4-3192490) prophage linear Cluster_0 Gammaproteobacteria_gi_556507092 hallmark;refseq 110;100;5;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 148 (4-3192490) extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_556507252-1137765-1179612 hallmark;refseq 55;51;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 148 (4-3192490) prophage linear Cluster_7 Gammaproteobacteria_gi_556507340-564356-576914 hallmark;refseq 12;11;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 152 (4-3447545) prophage linear Cluster_7 Gammaproteobacteria_gi_556507441-376314-398307 hallmark;refseq 31;25;6; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 152 (4-3447545) prophage linear Cluster_0 Gammaproteobacteria_gi_556507462 refseq 48;44;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 152 (4-3447545) extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_556507537 hallmark;refseq 27;25;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 152 (4-3447545) extrachromosomal linear Cluster_7 Gammaproteobacteria_gi_556507592 hallmark;refseq 36;32;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 152 (4-3447545) extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_556507609 hallmark;refseq 39;30;7;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 152 (4-3447545) extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_556507918 hallmark;refseq 108;95;2;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 178 (4-3189163) extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_556507960-0-46614 hallmark;refseq 63;48;4;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3148-1 prophage linear Cluster_16 Gammaproteobacteria_gi_556507984-357462-398578 hallmark;refseq 66;58;4;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3148-1 prophage linear Cluster_11 Gammaproteobacteria_gi_556507984-9435-56298 hallmark;refseq 64;53;11; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3148-1 prophage linear Cluster_0 Gammaproteobacteria_gi_556508000-849526-902645 hallmark;refseq 62;51;5;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3148-1 prophage linear Cluster_3 Gammaproteobacteria_gi_556511384-380463-423491 hallmark;refseq 57;46;7;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 36 (4-5675286) prophage linear Cluster_1 Gammaproteobacteria_gi_556511421 hallmark;refseq 103;93;2;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 36 (4-5675286) extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_556511720-71773-104795 hallmark;refseq 42;36;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 36 (4-5675286) prophage linear Cluster_0 Gammaproteobacteria_gi_556529909-65058-98141 hallmark;refseq 44;35;5;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 113302 prophage linear Cluster_0 Gammaproteobacteria_gi_556539578 hallmark;refseq 25;16;8;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 907391 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_556549020 hallmark;refseq 15;12;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 907391 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_556549193 hallmark;refseq 51;25;11;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 907446 extrachromosomal linear Cluster_28 Gammaproteobacteria_gi_556549214 refseq 12;7;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 907446 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_556549269-267-29291 hallmark;refseq 42;36;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 907446 prophage linear Cluster_1 Gammaproteobacteria_gi_556549306 hallmark;refseq 24;16;6;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 907446 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_556550243-2047030-2089284 hallmark;refseq 59;28;15;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli JJ1886 prophage linear Cluster_0 Gammaproteobacteria_gi_556555077-73465-104061 hallmark;refseq 41;34;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 907672 prophage linear Cluster_0 Gammaproteobacteria_gi_556555488 hallmark;refseq 14;11;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 907700 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_556555498 hallmark;refseq 15;11;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 907700 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_556555550-243845-258637 hallmark;refseq 19;15;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 907700 prophage linear Cluster_0 Gammaproteobacteria_gi_556555636 hallmark;refseq 20;15;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 907701 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_556555645 hallmark;refseq 14;8;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 907701 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_556555660 hallmark;refseq 14;11;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 907701 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_556555709 hallmark;refseq 29;22;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 907701 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_556561969-39364-75273 hallmark;refseq 49;34;9;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 907710 prophage linear Cluster_26 Gammaproteobacteria_gi_556562016 hallmark;noncaudo 7;3;;4 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 907710 extrachromosomal linear Cluster_36 Gammaproteobacteria_gi_556562060 noncaudo 4;2;;2 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 907710 extrachromosomal linear Cluster_36 Gammaproteobacteria_gi_556562145-6885-21272 hallmark;refseq 17;14;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 907715 prophage linear Cluster_2 Gammaproteobacteria_gi_556562188 hallmark;refseq 27;20;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 907715 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_556574498 refseq 10;5;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 907892 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_556579570 refseq 25;19;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 908519 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_556579585 hallmark;refseq 34;31;;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 908519 extrachromosomal linear Cluster_7 Gammaproteobacteria_gi_556579602 hallmark;refseq 16;13;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 908519 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_556579624 hallmark;refseq 118;97;8;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 908519 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_556579709-137519-159435 hallmark;refseq 29;27;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 908519 prophage linear Cluster_3 Gammaproteobacteria_gi_556579735 hallmark;refseq 19;16;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 908519 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_556579789 hallmark;refseq 35;31;1;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 908521 extrachromosomal linear Cluster_7 Gammaproteobacteria_gi_556579887 hallmark;refseq 26;17;8;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 908521 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_556579905-7627-22014 hallmark;refseq 17;14;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 908521 prophage linear Cluster_2 Gammaproteobacteria_gi_556585642-239-23454 hallmark;refseq 25;20;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 908522 prophage linear Cluster_11 Gammaproteobacteria_gi_556587541-179-38767 hallmark;refseq 53;47;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 908522 prophage linear Cluster_7 Gammaproteobacteria_gi_556587564-7486-21873 hallmark;refseq 17;14;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 908522 prophage linear Cluster_2 Gammaproteobacteria_gi_556587584 hallmark;refseq 21;14;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 908522 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_556589824 hallmark;refseq 28;18;8;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 908522 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_556589836 refseq 22;20;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 908522 extrachromosomal linear Cluster_23 Gammaproteobacteria_gi_556592382-261655-275716 hallmark;refseq 19;15;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 908524 prophage linear Cluster_0 Gammaproteobacteria_gi_556592472-229100-268592 hallmark;refseq 59;50;6;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 908525 prophage linear Cluster_11 Gammaproteobacteria_gi_556599774 hallmark;refseq 24;18;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 908541 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_556599821 refseq 16;8;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 908541 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_556599824-1788-11898 hallmark;refseq 9;7;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 908541 prophage linear Cluster_0 Gammaproteobacteria_gi_556599838 hallmark;refseq 20;16;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 908541 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_556599865-0-19485 hallmark;refseq 28;24;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 908541 prophage linear Cluster_0 Gammaproteobacteria_gi_556599867 hallmark;refseq 32;27;;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 908541 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_556599900 hallmark;refseq 18;15;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 908555 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_556605173-14155-49312 hallmark;refseq 44;33;6;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 908573 prophage linear Cluster_0 Gammaproteobacteria_gi_556607882 hallmark;refseq 36;30;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 908573 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_556614388 hallmark;refseq 15;12;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 908573 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_556614684 hallmark;refseq 28;17;9;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 908573 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_556615679 hallmark;refseq 22;15;2;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 908573 extrachromosomal linear Cluster_26 Gammaproteobacteria_gi_556622900 hallmark;refseq 53;25;18;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 908585 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_556623687-42581-75884 hallmark;refseq 42;33;6;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 908585 prophage linear Cluster_0 Gammaproteobacteria_gi_556654498-178-36658 hallmark;refseq 49;44;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 908616 prophage linear Cluster_7 Gammaproteobacteria_gi_556661261 hallmark;refseq 26;17;8;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 908616 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_556668092-7380-21767 hallmark;refseq 17;14;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 908616 prophage linear Cluster_2 Gammaproteobacteria_gi_556673882 hallmark;refseq 17;11;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 908624 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_556676698 hallmark;refseq 16;12;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 908624 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_556685114-30834-73089 hallmark;refseq 59;28;15;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 908624 prophage linear Cluster_0 Gammaproteobacteria_gi_556689304-42063-84317 hallmark;refseq 58;28;15;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 908632 prophage linear Cluster_0 Gammaproteobacteria_gi_556694774-5523-20209 hallmark;refseq 19;15;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 908632 prophage linear Cluster_0 Gammaproteobacteria_gi_556694786 hallmark;refseq 17;13;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 908632 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_556694790 hallmark;refseq 19;16;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 908632 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_556694815 hallmark;refseq 24;9;5;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 908632 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_556694849 hallmark;refseq 18;13;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 908658 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_556694852 hallmark;refseq 19;17;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 908658 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_556694939-68-23548 hallmark;refseq 33;27;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 908658 prophage linear Cluster_0 Gammaproteobacteria_gi_556694943-136-20291 hallmark;refseq 25;18;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 908658 prophage linear Cluster_4 Gammaproteobacteria_gi_556695057-130536-171634 hallmark;refseq 53;45;2;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 908675 prophage linear Cluster_7 Gammaproteobacteria_gi_556695067 hallmark;refseq 18;14;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 908675 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_556695084-0-44701 hallmark;refseq;vdb 56;44;6;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 908675 prophage linear Cluster_11 Gammaproteobacteria_gi_556695278 hallmark;refseq 20;15;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas sp. HPB0071 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_556925269-2114146-2150065 hallmark;refseq 50;50;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa str. Stone 130 prophage linear Cluster_59 Gammaproteobacteria_gi_556925269-5624939-5687940 hallmark;refseq;vdb 98;71;6;21 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa str. Stone 130 prophage linear Cluster_64 Gammaproteobacteria_gi_556925276-256-15333 noncaudo 24;4;2;18 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa str. Stone 130 prophage linear Cluster_163 Gammaproteobacteria_gi_556925344-2523064-2552790 hallmark;refseq 34;20;10;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas sp. P179 prophage linear Cluster_0 Gammaproteobacteria_gi_556925371-49530-91785 hallmark;refseq 59;28;15;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 908691 prophage linear Cluster_0 Gammaproteobacteria_gi_556925377-0-30853 hallmark;refseq;vdb 35;26;8;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 908691 prophage linear Cluster_1 Gammaproteobacteria_gi_556926068 hallmark;refseq 26;19;6;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 908691 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_556926793 refseq 14;8;5;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 910096-2 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_556926873-4585-16451 hallmark;refseq 14;14;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 910096-2 prophage linear Cluster_4 Gammaproteobacteria_gi_556926880 hallmark;refseq 22;14;7;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 910096-2 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_556926888 hallmark;refseq 54;28;15;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 910096-2 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_556926918-11865-44628 hallmark;refseq 41;36;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 910096-2 prophage linear Cluster_0 Gammaproteobacteria_gi_556926947-7410-21845 hallmark;refseq 17;14;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli A25922R prophage linear Cluster_2 Gammaproteobacteria_gi_556927359 refseq 10;6;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli A25922R extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_556927419 hallmark;noncaudo 8;4;;4 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli A35218R extrachromosomal linear Cluster_36 Gammaproteobacteria_gi_556927444-0-25708 hallmark;refseq 38;36;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli A35218R prophage linear Cluster_7 Gammaproteobacteria_gi_556927453 hallmark;noncaudo 7;4;;3 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli A35218R extrachromosomal linear Cluster_36 Gammaproteobacteria_gi_556927474-510-33817 hallmark;refseq 43;34;3;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli A35218R prophage linear Cluster_2 Gammaproteobacteria_gi_556927791-24373-39351 hallmark;refseq 19;15;2;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Agona str. 400095 18 prophage linear Cluster_22 Gammaproteobacteria_gi_557041560-21209-38196 hallmark;refseq 19;15;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. VA_R100506907 prophage linear Cluster_22 Gammaproteobacteria_gi_557041956 hallmark;refseq 17;15;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. VA_R100506907 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_557041968 hallmark;refseq 21;12;2;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Newport str. VA_R100506907 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_557314302 hallmark;refseq 49;29;8;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas putida S12 extrachromosomal linear Cluster_64 Gammaproteobacteria_gi_557401062 hallmark;refseq 11;6;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Chromatiales;Chromatiaceae;Thiohalocapsa uncultured Thiohalocapsa sp. PB-PSB1 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_557680149 hallmark;refseq 18;16;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa VRFPA05 extrachromosomal linear Cluster_23 Gammaproteobacteria_gi_557681391-37318-67240 hallmark;refseq 38;21;10;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa VRFPA05 prophage linear Cluster_0 Gammaproteobacteria_gi_557744713-38791-46820 refseq 13;9;1;3 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa VRFPA01 prophage linear Cluster_13 Gammaproteobacteria_gi_557841210-63482-72426 refseq 12;9;1;2 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa DHS01 prophage linear Cluster_13 Gammaproteobacteria_gi_557841566-102292-163099 hallmark;refseq;vdb 98;71;9;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa DHS01 prophage linear Cluster_64 Gammaproteobacteria_gi_557842004 hallmark;refseq 23;20;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa DHS01 extrachromosomal linear Cluster_425 Gammaproteobacteria_gi_557842025 hallmark;refseq 42;29;3;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa DHS01 extrachromosomal linear Cluster_100 Gammaproteobacteria_gi_557842112-51191-79693 hallmark;refseq 44;44;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa DHS01 prophage linear Cluster_59 Gammaproteobacteria_gi_557842385-41976-78912 hallmark;refseq 46;36;5;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa DHS01 prophage linear Cluster_0 Gammaproteobacteria_gi_557842471 hallmark;refseq 25;18;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa DHS01 extrachromosomal linear Cluster_7 Gammaproteobacteria_gi_557842493 refseq 21;12;;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa DHS01 extrachromosomal linear Cluster_83 Gammaproteobacteria_gi_557842521 hallmark;refseq 24;16;;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa DHS01 extrachromosomal linear Cluster_217 Gammaproteobacteria_gi_558087732-151701-170404 hallmark;refseq 27;24;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Enterobacter Enterobacter cloacae S611 prophage linear Cluster_0 Gammaproteobacteria_gi_558504554 noncaudo 7;2;1;4 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli CE418 extrachromosomal linear Cluster_270 Gammaproteobacteria_gi_558504559 refseq 9;8;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli CE418 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_558504566 refseq 18;11;1;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli CE418 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_558504570 refseq 17;17;; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli CE418 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_558504579 refseq 23;17;1;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli CE418 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_558504779 hallmark 11;5;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli CE418 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_558505810 hallmark;refseq 21;15;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli CE418 extrachromosomal linear Cluster_21 Gammaproteobacteria_gi_558506211 refseq 15;14;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli CE418 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_558506279 hallmark;refseq 15;15;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli CE418 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_558506344-7204-44426 hallmark;refseq 42;30;11;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli CE418 prophage linear Cluster_1 Gammaproteobacteria_gi_558507854-243445-274252 hallmark;refseq 41;32;4;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli CE516 prophage linear Cluster_11 Gammaproteobacteria_gi_558507858 refseq 22;15;7; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli CE516 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_558507969 hallmark 31;9;6;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli CE516 extrachromosomal linear Cluster_259 Gammaproteobacteria_gi_558507999 hallmark;refseq 35;22;5;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli CE516 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_558508352 hallmark;refseq 20;16;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli CE516 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_558508480-43107-74981 hallmark;refseq 40;33;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli CE516 prophage linear Cluster_0 Gammaproteobacteria_gi_558509252 hallmark 9;4;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli CE549 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_558559634 hallmark;refseq 28;21;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Serratia Serratia sp. DD3 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_558665962-6182066-6217394 hallmark;refseq 51;38;3;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa PA1R prophage linear Cluster_21 Gammaproteobacteria_gi_558880442-0-33858 hallmark;refseq 43;22;5;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas putida S610 prophage linear Cluster_83 Gammaproteobacteria_gi_559163067 hallmark;refseq 13;10;;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 907889 extrachromosomal linear Cluster_26 Gammaproteobacteria_gi_559163093 refseq 17;15;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli 907889 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_559165126 refseq 16;11;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli ECA-0157 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_559184906 hallmark 16;5;1;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli ECA-727 extrachromosomal linear Cluster_11 Gammaproteobacteria_gi_559185106-1696-12777 hallmark;refseq;vdb 11;7;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli ECA-727 prophage linear Cluster_0 Gammaproteobacteria_gi_559185296 hallmark;refseq 20;17;;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli ECA-727 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_559185581 hallmark;refseq 57;40;11;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli ECA-727 extrachromosomal linear Cluster_28 Gammaproteobacteria_gi_559186052 hallmark;refseq 14;13;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli ECA-727 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_559187163 hallmark;refseq 19;18;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli ECC-1470 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_559190646-280127-312129 hallmark;refseq 40;35;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli ECC-Z prophage linear Cluster_0 Gammaproteobacteria_gi_559191135 hallmark;refseq 59;47;6;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P4-96 extrachromosomal linear Cluster_11 Gammaproteobacteria_gi_559191445-121286-142945 hallmark;refseq 32;26;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P4-96 prophage linear Cluster_0 Gammaproteobacteria_gi_559191457-146-10233 hallmark;refseq 10;9;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P4-96 prophage linear Cluster_0 Gammaproteobacteria_gi_559192143-7147-47404 hallmark;refseq 59;47;6;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P4-NR prophage linear Cluster_11 Gammaproteobacteria_gi_559192163-121118-142792 hallmark;refseq 32;26;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P4-NR prophage linear Cluster_0 Gammaproteobacteria_gi_559192198-185032-209818 hallmark;refseq 25;21;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P4-NR prophage linear Cluster_1 Gammaproteobacteria_gi_559192252-40835-52042 hallmark;refseq 10;8;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli P4-NR prophage linear Cluster_0 Gammaproteobacteria_gi_559242687 noncaudo 7;3;;4 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Proteus Proteus hauseri ZMd44 extrachromosomal linear Cluster_266 Gammaproteobacteria_gi_560225711 refseq 10;5;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio nigripulchritudo SFn27 extrachromosomal linear Cluster_131 Gammaproteobacteria_gi_560225766 hallmark;refseq 30;15;2;13 Viruses;dsDNA viruses no RNA stage;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio nigripulchritudo SFn27 extrachromosomal linear Cluster_131 Gammaproteobacteria_gi_560457765 hallmark;refseq 81;31;16;34 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas mosselii SJ10 extrachromosomal linear Cluster_18 Gammaproteobacteria_gi_560461213-2552-29413 hallmark;refseq 49;27;2;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas mosselii SJ10 prophage linear Cluster_64 Gammaproteobacteria_gi_560462028 refseq 11;7;1;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas mosselii SJ10 extrachromosomal linear Cluster_83 Gammaproteobacteria_gi_560997353-13101-43513 hallmark;refseq 42;38;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Cubana str. CVM42234 prophage linear Cluster_0 Gammaproteobacteria_gi_560997376-23750-38710 hallmark;refseq 17;14;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Cubana str. CVM42234 prophage linear Cluster_22 Gammaproteobacteria_gi_560997416 hallmark;refseq 35;31;1;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Cubana str. CVM42234 extrachromosomal linear Cluster_23 Gammaproteobacteria_gi_560997418 refseq 21;14;2;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Cubana str. CVM42234 extrachromosomal linear Cluster_23 Gammaproteobacteria_gi_560997440-713275-755579 hallmark;refseq 62;39;16;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Cubana str. CVM42234 prophage linear Cluster_28 Gammaproteobacteria_gi_560997453 hallmark;refseq 27;20;3;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Cubana str. CVM42234 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_560999774-250781-261293 noncaudo 17;9;1;7 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio parahaemolyticus 10296 prophage linear Cluster_14 Gammaproteobacteria_gi_562750759-577776-617278 hallmark;refseq 57;49;;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa MH27 prophage linear Cluster_100 Gammaproteobacteria_gi_563365897-0-34821 hallmark;refseq 64;25;4;35 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas taiwanensis SJ9 prophage linear Cluster_18 Gammaproteobacteria_gi_564009567-15934-22841 refseq 9;7;1;1 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa DHS29 prophage linear Cluster_13 Gammaproteobacteria_gi_564009687-0-30270 hallmark;refseq 48;39;1;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa DHS29 prophage linear Cluster_64 Gammaproteobacteria_gi_564009803 refseq 24;12;4;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa DHS29 extrachromosomal linear Cluster_64 Gammaproteobacteria_gi_564009902 hallmark;refseq 22;19;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa DHS29 extrachromosomal linear Cluster_425 Gammaproteobacteria_gi_564009922-51140-79168 hallmark;refseq 43;43;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa DHS29 prophage linear Cluster_59 Gammaproteobacteria_gi_564010082 hallmark;refseq 23;15;;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa DHS29 extrachromosomal linear Cluster_217 Gammaproteobacteria_gi_564010107 refseq 31;20;1;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa DHS29 extrachromosomal linear Cluster_64 Gammaproteobacteria_gi_564010300 hallmark;refseq 38;26;3;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa DHS29 extrachromosomal linear Cluster_100 Gammaproteobacteria_gi_564010326 hallmark;refseq 40;32;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa DHS29 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_564010338 hallmark;refseq 19;15;;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa DHS29 extrachromosomal linear Cluster_7 Gammaproteobacteria_gi_564949884-5496886-5507771 noncaudo 12;8;2;2 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa MTB-1 prophage linear Cluster_13 Gammaproteobacteria_gi_564949884-6077055-6114722 hallmark;refseq 50;38;4;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa MTB-1 prophage linear Cluster_0 Gammaproteobacteria_gi_565128168-86265-117651 hallmark;refseq 45;38;4;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Cubana str. 76814 prophage linear Cluster_0 Gammaproteobacteria_gi_565129439-23246-38239 hallmark;refseq 17;14;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Cubana str. 76814 prophage linear Cluster_22 Gammaproteobacteria_gi_565623221-11146-48802 hallmark;refseq 58;53;2;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Montevideo str. CFSAN004346 prophage linear Cluster_11 Gammaproteobacteria_gi_565623388 refseq 13;7;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Spbetalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Montevideo str. CFSAN004346 extrachromosomal linear Cluster_428 Gammaproteobacteria_gi_565623409 hallmark;refseq 19;18;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Montevideo str. CFSAN004346 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_565624045 hallmark;refseq 70;37;12;21 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Montevideo str. CFSAN004346 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_565624524-10596-24995 hallmark;refseq 16;15;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium var. 5- str. CFSAN004345 prophage linear Cluster_0 Gammaproteobacteria_gi_565625003 hallmark;refseq 41;24;11;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium var. 5- str. CFSAN004345 extrachromosomal circular Cluster_0 Gammaproteobacteria_gi_565625206-0-15854 hallmark;refseq 22;20;1;1 Viruses;unclassified phages;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Muenster str. CFSAN004344 prophage linear Cluster_54 Gammaproteobacteria_gi_565625356-5434-45541 hallmark;refseq 64;57;3;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Muenster str. CFSAN004344 prophage linear Cluster_11 Gammaproteobacteria_gi_565625455-0-35728 hallmark;refseq 52;44;4;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Muenster str. CFSAN004344 prophage linear Cluster_3 Gammaproteobacteria_gi_565625633 hallmark;refseq 92;68;20;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Muenster str. CFSAN004344 extrachromosomal linear Cluster_21 Gammaproteobacteria_gi_565625942-10934-37364 hallmark;refseq 34;20;10;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Muenster str. CFSAN004344 prophage linear Cluster_225 Gammaproteobacteria_gi_565626149 hallmark;refseq 25;24;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Give var. 15 str. CFSAN004343 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_565626228 hallmark;refseq 57;52;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Give var. 15 str. CFSAN004343 extrachromosomal linear Cluster_11 Gammaproteobacteria_gi_565626239 hallmark;refseq 37;30;5;2 Viruses;unclassified phages;unknown;unknown;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Give var. 15 str. CFSAN004343 extrachromosomal linear Cluster_54 Gammaproteobacteria_gi_565626604-6174-40666 hallmark;refseq 37;27;8;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Give var. 15 str. CFSAN004343 prophage linear Cluster_2 Gammaproteobacteria_gi_565627663-22785-43177 hallmark;refseq;vdb 21;18;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Cerro str. CFSAN001697 prophage linear Cluster_11 Gammaproteobacteria_gi_565627692 hallmark;refseq 11;7;1;3 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Cerro str. CFSAN001697 extrachromosomal linear Cluster_36 Gammaproteobacteria_gi_565627836 hallmark;refseq 11;7;1;3 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Cerro str. CFSAN001692 extrachromosomal linear Cluster_36 Gammaproteobacteria_gi_565628149 hallmark;refseq 11;7;1;3 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Cerro str. CFSAN001691 extrachromosomal linear Cluster_36 Gammaproteobacteria_gi_565628246 hallmark;refseq 11;7;1;3 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Cerro str. CFSAN001690 extrachromosomal linear Cluster_36 Gammaproteobacteria_gi_565628374 hallmark;refseq 37;34;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Cerro str. CFSAN001681 extrachromosomal linear Cluster_23 Gammaproteobacteria_gi_565628505-255-28249 hallmark;refseq 36;33;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Cerro str. CFSAN001680 prophage linear Cluster_23 Gammaproteobacteria_gi_565631178-3930-31924 hallmark;refseq 37;34;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Cerro str. CFSAN001587 prophage linear Cluster_23 Gammaproteobacteria_gi_565631306 hallmark;refseq 6;4;;2 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Cerro str. CFSAN001587 extrachromosomal linear Cluster_36 Gammaproteobacteria_gi_565643352 hallmark;refseq 123;46;23;54 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter baumannii ZW85-1 extrachromosomal linear Cluster_53 Gammaproteobacteria_gi_565643472-2014841-2055599 hallmark;refseq 53;45;2;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Cronobacter Cronobacter sakazakii CMCC 45402 prophage linear Cluster_7 Gammaproteobacteria_gi_565818362-100720-106748 hallmark;noncaudo 13;3;2;8 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xylella Xylella fastidiosa 32 prophage linear Cluster_418 Gammaproteobacteria_gi_565818386 refseq 23;13;7;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xylella Xylella fastidiosa 32 extrachromosomal linear Cluster_202 Gammaproteobacteria_gi_565818428 refseq 36;18;5;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xylella Xylella fastidiosa 32 extrachromosomal linear Cluster_202 Gammaproteobacteria_gi_565818749-42970-55132 hallmark;refseq 13;11;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xylella Xylella fastidiosa 32 prophage linear Cluster_298 Gammaproteobacteria_gi_565818771 hallmark;refseq 25;20;;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xylella Xylella fastidiosa 32 extrachromosomal linear Cluster_298 Gammaproteobacteria_gi_565818901 hallmark;refseq 15;9;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xylella Xylella fastidiosa 32 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_565819539-0-11204 hallmark;noncaudo 19;8;2;9 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xylella Xylella fastidiosa 6c prophage linear Cluster_418 Gammaproteobacteria_gi_565819789-0-38145 hallmark;refseq 52;32;8;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xylella Xylella fastidiosa 6c prophage linear Cluster_0 Gammaproteobacteria_gi_565819799-0-5928 refseq 8;6;;2 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xylella Xylella fastidiosa 6c prophage linear Cluster_271 Gammaproteobacteria_gi_565820347 hallmark;refseq 48;45;1;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli LAU-EC6 extrachromosomal circular Cluster_7 Gammaproteobacteria_gi_565820363 hallmark;refseq 29;20;8;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli LAU-EC6 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_565822145-1240-39143 hallmark;refseq 59;25;23;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli LAU-EC6 prophage linear Cluster_28 Gammaproteobacteria_gi_565822602-122176-155301 hallmark;refseq 42;37;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli LAU-EC7 prophage linear Cluster_0 Gammaproteobacteria_gi_565822604-49745-91999 hallmark;refseq 58;28;15;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli LAU-EC7 prophage linear Cluster_0 Gammaproteobacteria_gi_565822667-478576-541923 hallmark;refseq 80;53;9;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli LAU-EC7 prophage linear Cluster_79 Gammaproteobacteria_gi_565822687 hallmark;refseq 25;20;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli LAU-EC7 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_565822708 refseq 17;14;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Punalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli LAU-EC7 extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_565822722 hallmark;refseq 20;15;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli LAU-EC7 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_565822838-0-11291 hallmark;refseq 13;10;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli LAU-EC7 prophage linear Cluster_0 Gammaproteobacteria_gi_565823013-58208-72346 hallmark;refseq 17;15;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli LAU-EC8 prophage linear Cluster_22 Gammaproteobacteria_gi_565823013-6047-27837 hallmark;refseq;vdb 36;30;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli LAU-EC8 prophage linear Cluster_3 Gammaproteobacteria_gi_565823102 hallmark;refseq 65;28;15;22 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli LAU-EC8 extrachromosomal circular Cluster_48 Gammaproteobacteria_gi_565823149 hallmark;refseq 49;26;17;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli LAU-EC8 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_565823167-1647-40599 hallmark;refseq 50;36;13;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli LAU-EC8 prophage linear Cluster_1 Gammaproteobacteria_gi_565823242-0-15024 hallmark;refseq 17;14;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli LAU-EC8 prophage linear Cluster_2 Gammaproteobacteria_gi_565824005-25281-39419 hallmark;refseq 17;15;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli LAU-EC9 prophage linear Cluster_22 Gammaproteobacteria_gi_565824005-69790-91580 hallmark;refseq;vdb 36;30;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli LAU-EC9 prophage linear Cluster_3 Gammaproteobacteria_gi_565824023 hallmark;refseq 65;28;15;22 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli LAU-EC9 extrachromosomal circular Cluster_48 Gammaproteobacteria_gi_565824033-1647-41022 hallmark;refseq 51;36;14;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli LAU-EC9 prophage linear Cluster_1 Gammaproteobacteria_gi_565824055-0-15024 hallmark;refseq 17;14;3; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli LAU-EC9 prophage linear Cluster_2 Gammaproteobacteria_gi_565825560 hallmark;refseq 50;30;14;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli LAU-EC10 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_565825646-19394-77105 hallmark;refseq 100;74;4;22 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa VRFPA06 prophage linear Cluster_64 Gammaproteobacteria_gi_565825697 hallmark;refseq 43;35;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli LAU-EC10 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_565825735 hallmark;refseq 31;25;6; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli LAU-EC10 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_565825843-225754-263081 hallmark;refseq;vdb 51;43;2;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli LAU-EC10 prophage linear Cluster_7 Gammaproteobacteria_gi_565849506 noncaudo 7;2;2;3 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Photobacterium Photobacterium leiognathi lrivu.4.1 extrachromosomal linear Cluster_228 Gammaproteobacteria_gi_565888720-477144-513425 hallmark;refseq;vdb 43;28;9;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas chlororaphis subsp. aurantiaca PB-St2 prophage linear Cluster_85 Gammaproteobacteria_gi_565889524 hallmark;refseq 15;12;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Cerro str. 5569 extrachromosomal linear Cluster_11 Gammaproteobacteria_gi_565889678 hallmark;refseq 22;20;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Cerro str. 5569 extrachromosomal linear Cluster_23 Gammaproteobacteria_gi_565890235 hallmark;refseq 8;6;1;1 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Cerro str. 5569 extrachromosomal linear Cluster_36 Gammaproteobacteria_gi_565891897-193-19346 hallmark;refseq 18;16;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. 3402 prophage linear Cluster_11 Gammaproteobacteria_gi_565891939 hallmark;refseq 23;19;1;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. 3402 extrachromosomal linear Cluster_23 Gammaproteobacteria_gi_565892136 refseq 20;19;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. 3402 extrachromosomal linear Cluster_23 Gammaproteobacteria_gi_565892180 hallmark;refseq 55;45;5;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. 3402 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_565892401-10910-39106 hallmark;refseq 30;30;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. 3402 prophage linear Cluster_7 Gammaproteobacteria_gi_565892570-18220-47673 hallmark;refseq 37;24;7;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. 3402 prophage linear Cluster_0 Gammaproteobacteria_gi_565892617 hallmark;refseq 23;22;;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium var. Copenhagen str. 0084 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_565892662 refseq 13;11;2; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium var. Copenhagen str. 0084 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_565892773 hallmark;refseq 21;15;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium var. Copenhagen str. 0084 extrachromosomal linear Cluster_22 Gammaproteobacteria_gi_565893125-27522-69886 hallmark;refseq 56;55;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium var. Copenhagen str. 0084 prophage linear Cluster_3 Gammaproteobacteria_gi_565893145 hallmark;refseq 40;39;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium var. Copenhagen str. 0084 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_565893190-295-22438 hallmark;refseq 29;25;4; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium var. Copenhagen str. 0084 prophage linear Cluster_0 Gammaproteobacteria_gi_565893228-0-33835 hallmark;refseq 44;40;3;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Typhimurium var. Copenhagen str. 0084 prophage linear Cluster_11 Gammaproteobacteria_gi_565901091-38350-46423 noncaudo 11;8;1;2 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa VRFPA07 prophage linear Cluster_13 Gammaproteobacteria_gi_565901485-0-36402 hallmark;refseq 51;36;4;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa VRFPA07 prophage linear Cluster_7 Gammaproteobacteria_gi_565902545 hallmark;refseq 15;13;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli ATCC BAA-2209 extrachromosomal linear Cluster_11 Gammaproteobacteria_gi_565905389 refseq 17;15;2; Viruses;unclassified phages;unknown;unknown;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli ATCC BAA-2209 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_565926020 refseq 19;17;1;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli ATCC BAA-2209 extrachromosomal linear Cluster_11 Gammaproteobacteria_gi_565927516 hallmark;refseq 12;12;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli ATCC BAA-2209 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_565952559-41933-56334 hallmark;refseq 15;10;4;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli ATCC BAA-2215 prophage linear Cluster_3 Gammaproteobacteria_gi_565953221-91560-120909 hallmark;refseq;vdb 32;19;8;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli ATCC BAA-2215 prophage linear Cluster_0 Gammaproteobacteria_gi_566073850-157357-200954 hallmark;refseq 67;57;1;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Infantis str. 119944 prophage linear Cluster_4 Gammaproteobacteria_gi_566073961-226333-243120 hallmark;refseq 18;15;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Infantis str. 119944 prophage linear Cluster_22 Gammaproteobacteria_gi_566074159-0-22119 hallmark;refseq 32;27;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Infantis str. 119944 prophage linear Cluster_0 Gammaproteobacteria_gi_566075084 refseq 11;10;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Infantis str. 335-3 extrachromosomal linear Cluster_4 Gammaproteobacteria_gi_566075183-108828-125567 hallmark;refseq 18;15;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella Salmonella enterica subsp. enterica serovar Infantis str. 335-3 prophage linear Cluster_22 Gammaproteobacteria_gi_566137214-0-4070 refseq 5;4;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa VRFPA08 prophage linear Cluster_19 Gammaproteobacteria_gi_566137214-4020-11809 refseq 13;8;;5 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa VRFPA08 prophage linear Cluster_13 Gammaproteobacteria_gi_566137228 refseq 23;9;7;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa VRFPA08 extrachromosomal linear Cluster_59 Gammaproteobacteria_gi_566137320-25997-50298 refseq 36;20;3;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa VRFPA08 prophage linear Cluster_13 Gammaproteobacteria_gi_566137443 hallmark;refseq 30;19;4;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa VRFPA08 extrachromosomal linear Cluster_83 Gammaproteobacteria_gi_566137445 hallmark;refseq 20;10;6;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa VRFPA08 extrachromosomal linear Cluster_18 Gammaproteobacteria_gi_566137455 hallmark;refseq 48;46;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa VRFPA08 extrachromosomal linear Cluster_59 Gammaproteobacteria_gi_566137516 refseq 24;14;1;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa VRFPA08 extrachromosomal linear Cluster_64 Gammaproteobacteria_gi_566137562 refseq 31;12;4;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa VRFPA08 extrachromosomal linear Cluster_64 Gammaproteobacteria_gi_566137571 hallmark;vdb 22;7;5;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa VRFPA08 extrachromosomal linear Cluster_249 Gammaproteobacteria_gi_566137579 refseq 23;17;1;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa VRFPA08 extrachromosomal linear Cluster_83 Gammaproteobacteria_gi_566137654 hallmark;refseq 33;17;2;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa VRFPA08 extrachromosomal linear Cluster_100 Gammaproteobacteria_gi_566138188-563795-609039 hallmark;refseq 65;55;7;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 23 (4-6066488) prophage linear Cluster_11 Gammaproteobacteria_gi_566138364-524829-566195 hallmark;refseq 53;47;2;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 83 (4-2051087) prophage linear Cluster_7 Gammaproteobacteria_gi_566138390-406503-431936 hallmark;refseq 37;25;9;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 83 (4-2051087) prophage linear Cluster_1 Gammaproteobacteria_gi_566138399-92388-133625 hallmark;refseq 60;55;3;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;P22likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 83 (4-2051087) prophage linear Cluster_11 Gammaproteobacteria_gi_566138508-1759867-1802028 hallmark;refseq 59;28;15;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 177 (4-2876612) prophage linear Cluster_0 Gammaproteobacteria_gi_566138508-677984-709947 hallmark;refseq 40;33;5;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 177 (4-2876612) prophage linear Cluster_0 Gammaproteobacteria_gi_566138678-963464-999408 hallmark;refseq 43;34;7;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 214 (4-3062198) prophage linear Cluster_0 Gammaproteobacteria_gi_566138688-679817-725842 hallmark;refseq;vdb 59;35;17;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli HVH 214 (4-3062198) prophage linear Cluster_2 Gammaproteobacteria_gi_566139301-1902425-1944543 hallmark;refseq 58;52;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli UMEA 3489-1 prophage linear Cluster_7 Gammaproteobacteria_gi_567340309 refseq 23;15;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli ATCC BAA-2196 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_567344223-7671-22367 hallmark;refseq 18;15;2;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli ATCC BAA-2196 prophage linear Cluster_2 Gammaproteobacteria_gi_567372713 refseq 16;10;4;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli ATCC BAA-2196 extrachromosomal linear Cluster_174 Gammaproteobacteria_gi_567383732 hallmark;refseq 53;24;16;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli ATCC BAA-2196 extrachromosomal linear Cluster_3 Gammaproteobacteria_gi_567385727-32109-63081 hallmark;refseq 28;28;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli ATCC BAA-2196 prophage linear Cluster_5 Gammaproteobacteria_gi_567441093 hallmark;refseq 10;10;; Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli ATCC BAA-2219 extrachromosomal linear Cluster_5 Gammaproteobacteria_gi_567441305 refseq 18;13;5; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli ATCC BAA-2219 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_567441375 hallmark;refseq 14;9;5; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli ATCC BAA-2219 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_567442761 hallmark;refseq 39;24;6;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli ATCC BAA-2219 extrachromosomal linear Cluster_2 Gammaproteobacteria_gi_568135155-0-36453 hallmark;refseq 47;33;4;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pseudotuberculosis NBRC 105692 prophage linear Cluster_0 Gammaproteobacteria_gi_568135523 hallmark;refseq 39;25;11;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pseudotuberculosis NBRC 105692 extrachromosomal linear Cluster_0 Gammaproteobacteria_gi_568136993-1546200-1558745 hallmark;refseq 19;14;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas sp. TKP prophage linear Cluster_85 Gammaproteobacteria_gi_568136993-3261974-3319642 hallmark;refseq 72;32;18;22 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas sp. TKP prophage linear Cluster_18 Gammaproteobacteria_gi_568151185-2648273-2698137 hallmark;refseq 69;57;4;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa LES431 prophage linear Cluster_64 Gammaproteobacteria_gi_568151185-4492468-4500670 noncaudo 13;10;;3 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa LES431 prophage linear Cluster_13 Gammaproteobacteria_gi_568306739-2834591-2873505 hallmark;refseq 53;48;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa SCV20265 prophage linear Cluster_100 Gammaproteobacteria_gi_568306739-3303007-3319554 noncaudo 21;5;6;10 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa SCV20265 prophage linear Cluster_228 Gammaproteobacteria_gi_568306739-5643335-5654301 noncaudo 13;9;3;1 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa SCV20265 prophage linear Cluster_13 Gammaproteobacteria_gi_568306739-6226519-6262400 hallmark;refseq 45;35;5;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa SCV20265 prophage linear Cluster_0 Gammaproteobacteria_gi_57014152-1776416-1791725 hallmark;noncaudo 28;11;3;14 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xylella Xylella fastidiosa 9a5c prophage linear Cluster_418 Gammaproteobacteria_gi_584594822-14-36660 hallmark;refseq 43;31;3;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter nosocomialis 28F prophage linear Cluster_46 Gammaproteobacteria_gi_584594865 refseq 19;8;3;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter nosocomialis 28F extrachromosomal linear Cluster_38 Gammaproteobacteria_gi_584595106 refseq 21;12;2;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter pittii 42F extrachromosomal linear Cluster_28 Gammaproteobacteria_gi_584595126-0-7064 hallmark;noncaudo;vdb 10;3;1;6 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter pittii 42F prophage linear Cluster_416 Gammaproteobacteria_gi_584595142-902-27321 hallmark;refseq 31;20;5;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Moraxellaceae;Acinetobacter Acinetobacter pittii 42F prophage linear Cluster_24 Gammaproteobacteria_gi_590801025-22937-55357 hallmark;refseq 48;39;5;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli E1777 prophage linear Cluster_3 Gammaproteobacteria_gi_590801178 refseq 47;39;8; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;T4likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli E1777 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_590802476 hallmark;refseq;vdb 46;25;17;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli E1777 extrachromosomal linear Cluster_10 Gammaproteobacteria_gi_590806028 refseq 30;21;3;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli E1777 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_590809019 hallmark;refseq 25;24;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli E1777 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_590809708 refseq 17;12;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli E1777 extrachromosomal linear Cluster_9 Gammaproteobacteria_gi_590817279 hallmark;refseq 30;21;8;1 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Escherichia Escherichia coli E1777 extrachromosomal linear Cluster_1 Gammaproteobacteria_gi_66766352-2528166-2545161 noncaudo 27;16;2;9 Viruses;ssDNA viruses;unknown;Inoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas campestris pv. campestris str. 8004 prophage linear Cluster_43 Gammaproteobacteria_gi_70724907 hallmark;refseq 29;24;1;4 Viruses;unclassified phages;unknown;unknown;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Sodalis Sodalis glossinidius extrachromosomal linear Cluster_7 Gammaproteobacteria_gi_71276652 hallmark 25;10;6;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xylella Xylella fastidiosa Dixon extrachromosomal linear Cluster_184 Gammaproteobacteria_gi_71276698 hallmark;vdb 14;6;3;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xylella Xylella fastidiosa Dixon extrachromosomal linear Cluster_202 Gammaproteobacteria_gi_71276714 hallmark;refseq 21;11;1;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xylella Xylella fastidiosa Dixon extrachromosomal linear Cluster_202 Gammaproteobacteria_gi_78045556-2783418-2796071 hallmark;noncaudo 24;11;1;12 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas campestris pv. vesicatoria str. 85-10 prophage linear Cluster_43 Gammaproteobacteria_gi_84621657-2362429-2381835 hallmark;noncaudo 29;12;6;11 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Xanthomonas Xanthomonas oryzae pv. oryzae MAFF 311018 prophage linear Cluster_153 Gammaproteobacteria_gi_85057978-2871284-2907541 hallmark;refseq 50;25;6;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Sodalis Sodalis glossinidius str. 'morsitans' prophage linear Cluster_114 Halobacteria_gi_257051090-779501-788180 noncaudo 10;7;;3 Viruses;ssDNA viruses;unknown;unknown;unknown;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Halorhabdus Halorhabdus utahensis DSM 12940 prophage linear Cluster_139 Halobacteria_gi_257386085-423263-463260 hallmark;noncaudo 55;12;5;38 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Halomicrobium Halomicrobium mukohataei DSM 12286 prophage linear Cluster_139 Halobacteria_gi_257386085-912068-927416 noncaudo 19;8;;11 Viruses;ssDNA viruses;unknown;unknown;;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Halomicrobium Halomicrobium mukohataei DSM 12286 prophage linear Cluster_124 Halobacteria_gi_289579696-268989-287077 noncaudo 22;7;4;11 Viruses;ssDNA viruses;unknown;unknown;;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Natrialba Natrialba magadii ATCC 43099 prophage linear Cluster_87 Halobacteria_gi_289594273 hallmark;refseq 92;86;;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Natrialba Natrialba magadii ATCC 43099 extrachromosomal linear Cluster_284 Halobacteria_gi_292654178-1299284-1307336 noncaudo 10;6;;4 Viruses;ssDNA viruses;unknown;unknown;unclassified;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Haloferax Haloferax volcanii DS2 prophage linear Cluster_124 Halobacteria_gi_292654178-238920-256155 noncaudo 13;7;4;2 Viruses;ssDNA viruses;unknown;unknown;unclassified;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Haloferax Haloferax volcanii DS2 prophage linear Cluster_324 Halobacteria_gi_322371616 hallmark;refseq 40;13;2;25 Viruses;dsDNA viruses no RNA stage;unknown;unknown;unknown;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Haladaptatus Haladaptatus paucihalophilus DX253 extrachromosomal linear Cluster_574 Halobacteria_gi_336252096-3610642-3631645 noncaudo 30;10;3;17 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Halopiger Halopiger xanaduensis SH-6 prophage linear Cluster_87 Halobacteria_gi_336252096-636851-648746 noncaudo 14;7;;7 Viruses;ssDNA viruses;unknown;unknown;unknown;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Halopiger Halopiger xanaduensis SH-6 prophage linear Cluster_87 Halobacteria_gi_344210305-2710849-2729862 noncaudo 26;9;1;16 Viruses;ssDNA viruses;unknown;unknown;unknown;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Haloarcula Haloarcula hispanica ATCC 33960 prophage linear Cluster_139 Halobacteria_gi_381414460-8392-26272 hallmark;refseq 26;12;1;13 Viruses;dsDNA viruses no RNA stage;unknown;unknown;unknown;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Halobiforma Halobiforma lacisalsi AJ5 prophage linear Cluster_575 Halobacteria_gi_381414467 noncaudo 16;4;1;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Halobiforma Halobiforma lacisalsi AJ5 extrachromosomal linear Cluster_595 Halobacteria_gi_381414478 noncaudo 7;3;;4 Viruses;ssDNA viruses;unknown;unknown;unknown;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Halobiforma Halobiforma lacisalsi AJ5 extrachromosomal linear Cluster_380 Halobacteria_gi_397771790-655984-665141 noncaudo 11;8;;3 Viruses;ssDNA viruses;unknown;unknown;unclassified;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Natrinema Natrinema sp. J7-2 prophage linear Cluster_87 Halobacteria_gi_409167714 hallmark;refseq 17;7;;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Halococcus Halococcus hamelinensis 100A6 extrachromosomal linear Cluster_284 Halobacteria_gi_410688693 refseq 15;7;;8 Viruses;ssDNA viruses;unknown;unknown;;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Haloferax Haloferax lucentense DSM 14919 extrachromosomal linear Cluster_124 Halobacteria_gi_433425862 noncaudo 7;3;;4 Viruses;ssDNA viruses;unknown;unknown;;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Haloferax Haloferax sp. BAB2207 extrachromosomal linear Cluster_124 Halobacteria_gi_433637028-2086207-2096493 noncaudo 15;5;;10 Viruses;ssDNA viruses;unknown;unknown;unknown;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Halovivax Halovivax ruber XH-70 prophage linear Cluster_87 Halobacteria_gi_448281150-35255-45734 noncaudo 16;6;2;8 Viruses;ssDNA viruses;unknown;unknown;;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Natrialba Natrialba magadii ATCC 43099 prophage linear Cluster_87 Halobacteria_gi_448285003 hallmark;refseq 92;86;;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Natrialba Natrialba magadii ATCC 43099 extrachromosomal linear Cluster_284 Halobacteria_gi_448291730-71576-83902 noncaudo 15;8;;7 Viruses;ssDNA viruses;unknown;unknown;unclassified;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Haloferax Haloferax volcanii DS2 prophage linear Cluster_124 Halobacteria_gi_448293993 refseq 12;5;1;6 Viruses;ssDNA viruses;unknown;unknown;unclassified;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Haloferax Haloferax volcanii DS2 extrachromosomal linear Cluster_324 Halobacteria_gi_448294712-6476-64495 hallmark 79;16;3;60 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Halalkalicoccus Halalkalicoccus jeotgali B3 prophage linear Cluster_284 Halobacteria_gi_448298087-53407-66823 noncaudo 20;6;1;13 Viruses;ssDNA viruses;unknown;unknown;;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Natronorubrum Natronorubrum tibetense GA33 prophage linear Cluster_380 Halobacteria_gi_448303253-72276-133184 hallmark;refseq 83;37;2;44 Viruses;dsDNA viruses no RNA stage;unclassified;unclassified;unclassified;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Natronorubrum Natronorubrum sulfidifaciens JCM 14089 prophage linear Cluster_555 Halobacteria_gi_448305451-96288-103987 noncaudo 10;4;1;5 Viruses;ssDNA viruses;unknown;unknown;;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Natronorubrum Natronorubrum sulfidifaciens JCM 14089 prophage linear Cluster_87 Halobacteria_gi_448306972-9594-18301 noncaudo 10;5;1;4 Viruses;ssDNA viruses;unknown;unknown;;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Natronorubrum Natronorubrum bangense JCM 10635 prophage linear Cluster_87 Halobacteria_gi_448307387-192053-246867 hallmark;refseq 84;34;;50 Viruses;dsDNA viruses no RNA stage;unclassified;unclassified;unknown;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Natronorubrum Natronorubrum bangense JCM 10635 prophage linear Cluster_555 Halobacteria_gi_448313326 noncaudo 19;7;1;11 Viruses;ssDNA viruses;unknown;unknown;;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Natronolimnobius Natronolimnobius innermongolicus JCM 12255 extrachromosomal linear Cluster_380 Halobacteria_gi_448316119 refseq 6;5;;1 Viruses;ssDNA viruses;unknown;unknown;unknown;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Natronococcus Natronococcus jeotgali DSM 18795 extrachromosomal linear Cluster_156 Halobacteria_gi_448330764-14227-33803 refseq 28;11;1;16 Viruses;ssDNA viruses;unknown;unknown;unknown;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Natrinema Natrinema versiforme JCM 10478 prophage linear Cluster_87 Halobacteria_gi_448345507-100317-118155 noncaudo 26;9;2;15 Viruses;ssDNA viruses;unknown;unknown;unclassified;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Natrinema Natrinema altunense JCM 12890 prophage linear Cluster_87 Halobacteria_gi_448349506 refseq 9;5;;4 Viruses;ssDNA viruses;unknown;unknown;unknown;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Natrialba Natrialba taiwanensis DSM 12281 extrachromosomal linear Cluster_156 Halobacteria_gi_448349957 hallmark;refseq 78;18;1;59 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Natrialba Natrialba taiwanensis DSM 12281 extrachromosomal circular Cluster_586 Halobacteria_gi_448350073-138912-158077 noncaudo 22;8;2;12 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Natrialba Natrialba taiwanensis DSM 12281 prophage linear Cluster_87 Halobacteria_gi_448355303-29616-43126 noncaudo 17;5;;12 Viruses;ssDNA viruses;unknown;unknown;;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Natrialba Natrialba hulunbeirensis JCM 10989 prophage linear Cluster_87 Halobacteria_gi_448356238 refseq 5;3;;2 Viruses;ssDNA viruses;unknown;unknown;unknown;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Natrialba Natrialba hulunbeirensis JCM 10989 extrachromosomal linear Cluster_156 Halobacteria_gi_448356977 refseq 11;7;;4 Viruses;ssDNA viruses;unknown;unknown;unknown;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Natrialba Natrialba chahannaoensis JCM 10990 extrachromosomal linear Cluster_156 Halobacteria_gi_448356994 noncaudo 7;3;;4 Viruses;ssDNA viruses;unknown;unknown;;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Natrialba Natrialba chahannaoensis JCM 10990 extrachromosomal linear Cluster_124 Halobacteria_gi_448358050 refseq 8;4;;4 Viruses;ssDNA viruses;unknown;unknown;;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Natrialba Natrialba chahannaoensis JCM 10990 extrachromosomal linear Cluster_87 Halobacteria_gi_448358778-57085-70074 noncaudo 16;4;1;11 Viruses;ssDNA viruses;unknown;unknown;unclassified;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Natrialba Natrialba chahannaoensis JCM 10990 prophage linear Cluster_87 Halobacteria_gi_448359188-0-9993 noncaudo 14;5;;9 Viruses;ssDNA viruses;unknown;unknown;;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Natrialba Natrialba chahannaoensis JCM 10990 prophage linear Cluster_87 Halobacteria_gi_448362567-9627-44171 hallmark;noncaudo;vdb 34;8;;26 Viruses;dsDNA viruses no RNA stage;unknown;unknown;unknown;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Natrialba Natrialba asiatica DSM 12278 prophage linear Cluster_586 Halobacteria_gi_448363921-81326-94371 noncaudo 15;8;1;6 Viruses;ssDNA viruses;unknown;unknown;;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Natrialba Natrialba asiatica DSM 12278 prophage linear Cluster_87 Halobacteria_gi_448367707 hallmark;refseq 12;9;;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Natrialba Natrialba aegyptia DSM 13077 extrachromosomal linear Cluster_325 Halobacteria_gi_448376649-179780-203485 noncaudo 28;10;;18 Viruses;ssDNA viruses;unknown;unknown;unknown;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Halovivax Halovivax asiaticus JCM 14624 prophage linear Cluster_87 Halobacteria_gi_448383777-0-13354 noncaudo 16;5;;11 Viruses;ssDNA viruses;unknown;unknown;unclassified;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Haloterrigena Haloterrigena thermotolerans DSM 11522 prophage linear Cluster_87 Halobacteria_gi_448385936-203139-211456 noncaudo 11;6;1;4 Viruses;ssDNA viruses;unknown;unknown;unclassified;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Haloterrigena Haloterrigena thermotolerans DSM 11522 prophage linear Cluster_87 Halobacteria_gi_448386223-0-18400 noncaudo 27;9;3;15 Viruses;ssDNA viruses;unknown;unknown;unclassified;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Haloterrigena Haloterrigena thermotolerans DSM 11522 prophage linear Cluster_87 Halobacteria_gi_448404314 refseq 11;7;;4 Viruses;ssDNA viruses;unknown;unknown;unknown;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Haloterrigena Haloterrigena limicola JCM 13563 extrachromosomal linear Cluster_156 Halobacteria_gi_448406145-102907-117157 noncaudo 18;6;;12 Viruses;ssDNA viruses;unknown;unknown;unknown;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Halosimplex Halosimplex carlsbadense 2-9-1 prophage linear Cluster_139 Halobacteria_gi_448410956-177880-193721 noncaudo 20;7;1;12 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Halosimplex Halosimplex carlsbadense 2-9-1 prophage linear Cluster_124 Halobacteria_gi_448421045 refseq 11;7;;4 Viruses;ssDNA viruses;unknown;unknown;unknown;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Halorubrum Halorubrum terrestre JCM 10247 extrachromosomal circular Cluster_156 Halobacteria_gi_448424038-80920-95419 noncaudo 18;6;1;11 Viruses;ssDNA viruses;unknown;unknown;unknown;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Halorubrum Halorubrum terrestre JCM 10247 prophage linear Cluster_442 Halobacteria_gi_448427000-72-8721 noncaudo 12;4;;8 Viruses;ssDNA viruses;unknown;unknown;unknown;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Halorubrum Halorubrum terrestre JCM 10247 prophage linear Cluster_442 Halobacteria_gi_448460196-205347-227019 noncaudo 34;11;;23 Viruses;dsDNA viruses no RNA stage;unclassified;unclassified;unknown;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Halorubrum Halorubrum lipolyticum DSM 21995 prophage linear unclustered Halobacteria_gi_448466231-19110-33970 refseq 18;9;1;8 Viruses;ssDNA viruses;unknown;unknown;unknown;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Halorubrum Halorubrum kocurii JCM 14978 prophage linear Cluster_276 Halobacteria_gi_448472989 hallmark;refseq 42;12;7;23 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Halorubrum Halorubrum aidingense JCM 13560 extrachromosomal linear Cluster_325 Halobacteria_gi_448473100-287-13395 refseq 29;15;;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Halorubrum Halorubrum aidingense JCM 13560 prophage linear Cluster_325 Halobacteria_gi_448495353 refseq 6;4;;2 Viruses;ssDNA viruses;unknown;unknown;unknown;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Halorubrum Halorubrum californiensis DSM 19288 extrachromosomal linear Cluster_156 Halobacteria_gi_448498985-3140-23576 refseq 22;10;2;10 Viruses;ssDNA viruses;unknown;unknown;unknown;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Halorubrum Halorubrum coriense DSM 10284 prophage linear Cluster_276 Halobacteria_gi_448499170-10445-21938 noncaudo 14;7;;7 Viruses;ssDNA viruses;unknown;unknown;unknown;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Halorubrum Halorubrum coriense DSM 10284 prophage linear Cluster_276 Halobacteria_gi_448502870-13516-33994 noncaudo 24;8;2;14 Viruses;ssDNA viruses;unknown;unknown;unknown;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Halorubrum Halorubrum coriense DSM 10284 prophage linear Cluster_442 Halobacteria_gi_448543799-10614-35830 noncaudo 29;7;3;19 Viruses;ssDNA viruses;unknown;unknown;unclassified;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Haloferax Haloferax sp. ATCC BAA-646 prophage linear Cluster_324 Halobacteria_gi_448550861-23992-49182 noncaudo 30;7;3;20 Viruses;ssDNA viruses;unknown;unknown;unclassified;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Haloferax Haloferax sp. ATCC BAA-645 prophage linear Cluster_324 Halobacteria_gi_448558771-8784-33975 noncaudo 31;8;3;20 Viruses;ssDNA viruses;unknown;unknown;unclassified;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Haloferax Haloferax sp. ATCC BAA-644 prophage linear Cluster_324 Halobacteria_gi_448564640 refseq 9;6;;3 Viruses;ssDNA viruses;unknown;unknown;unknown;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Haloferax Haloferax prahovense DSM 18310 extrachromosomal linear Cluster_156 Halobacteria_gi_448585324-270595-278336 noncaudo 10;6;;4 Viruses;ssDNA viruses;unknown;unknown;unknown;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Haloferax Haloferax gibbonsii ATCC 33959 prophage linear Cluster_124 Halobacteria_gi_448592111 hallmark;refseq 70;23;1;46 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Haloferax Haloferax elongans ATCC BAA-1513 extrachromosomal circular Cluster_603 Halobacteria_gi_448598063 refseq 11;7;;4 Viruses;ssDNA viruses;unknown;unknown;unknown;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Haloferax Haloferax alexandrinus JCM 10717 extrachromosomal linear Cluster_156 Halobacteria_gi_448610561 hallmark;refseq 60;16;2;42 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Haloferax Haloferax mucosum ATCC BAA-1512 extrachromosomal linear Cluster_603 Halobacteria_gi_448623630-35790-47017 noncaudo 16;8;;8 Viruses;ssDNA viruses;unknown;unknown;;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Haloferax Haloferax denitrificans ATCC 35960 prophage linear Cluster_124 Halobacteria_gi_448626887-118246-127934 noncaudo 9;5;2;2 Viruses;ssDNA viruses;unknown;unknown;;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Haloarcula Haloarcula vallismortis ATCC 29715 prophage linear Cluster_139 Halobacteria_gi_448633164 noncaudo 28;4;4;20 Viruses;dsDNA viruses no RNA stage;unknown;unknown;unknown;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Haloarcula Haloarcula vallismortis ATCC 29715 extrachromosomal linear unclustered Halobacteria_gi_448664643-48834-68054 noncaudo 24;8;3;13 Viruses;ssDNA viruses;unknown;unknown;unknown;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Haloarcula Haloarcula amylolytica JCM 13557 prophage linear Cluster_139 Halobacteria_gi_448671664-65692-85879 noncaudo 22;7;;15 Viruses;ssDNA viruses;unknown;unknown;unknown;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Haloarcula Haloarcula amylolytica JCM 13557 prophage linear Cluster_124 Halobacteria_gi_448677191 refseq 8;5;;3 Viruses;ssDNA viruses;unknown;unknown;unknown;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Haloarcula Haloarcula argentinensis DSM 12282 extrachromosomal linear Cluster_156 Halobacteria_gi_448680304-178065-199729 noncaudo 26;8;;18 Viruses;ssDNA viruses;unknown;unknown;unknown;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Haloarcula Haloarcula argentinensis DSM 12282 prophage linear Cluster_139 Halobacteria_gi_448680304-261073-274437 noncaudo 19;5;1;13 Viruses;ssDNA viruses;unknown;unknown;;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Haloarcula Haloarcula argentinensis DSM 12282 prophage linear Cluster_139 Halobacteria_gi_448681465-135912-150818 noncaudo 23;7;;16 Viruses;ssDNA viruses;unknown;unknown;unknown;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Haloarcula Haloarcula argentinensis DSM 12282 prophage linear Cluster_124 Halobacteria_gi_448683719-248199-271311 noncaudo 26;10;1;15 Viruses;ssDNA viruses;unknown;unknown;unknown;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Haloarcula Haloarcula japonica DSM 6131 prophage linear Cluster_139 Halobacteria_gi_448694324 refseq 6;4;1;1 Viruses;ssDNA viruses;unknown;unknown;;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Halobiforma Halobiforma lacisalsi AJ5 extrachromosomal linear Cluster_87 Halobacteria_gi_448695449-8434-26479 hallmark;refseq 27;13;1;13 Viruses;dsDNA viruses no RNA stage;unknown;unknown;unknown;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Halobiforma Halobiforma lacisalsi AJ5 prophage linear Cluster_575 Halobacteria_gi_448700956 noncaudo 16;4;1;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Halobiforma Halobiforma lacisalsi AJ5 extrachromosomal linear Cluster_595 Halobacteria_gi_448721402-640-8235 noncaudo 10;4;2;4 Viruses;ssDNA viruses;unknown;unknown;unclassified;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Halobiforma Halobiforma nitratireducens JCM 10879 prophage linear Cluster_87 Halobacteria_gi_448728133-100599-153663 hallmark;noncaudo 83;13;3;67 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Halococcus Halococcus saccharolyticus DSM 5350 prophage linear Cluster_329 Halobacteria_gi_448728316 hallmark 35;8;;27 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Halococcus Halococcus saccharolyticus DSM 5350 extrachromosomal linear unclustered Halobacteria_gi_448735791 refseq 9;5;;4 Viruses;ssDNA viruses;unknown;unknown;unknown;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Halococcus Halococcus thailandensis JCM 13552 extrachromosomal linear Cluster_156 Halobacteria_gi_448739773 noncaudo 30;6;7;17 Viruses;dsDNA viruses no RNA stage;unclassified;unclassified;unknown;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Halococcus Halococcus thailandensis JCM 13552 extrachromosomal linear unclustered Halobacteria_gi_482989160-1666641-1686042 noncaudo 27;8;1;18 Viruses;ssDNA viruses;unknown;unknown;;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Halomicrobium Halomicrobium katesii DSM 19301 prophage linear Cluster_139 Halobacteria_gi_482989397-13759-33075 noncaudo 28;5;2;21 Viruses;ssDNA viruses;unknown;unknown;unclassified;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Halomicrobium Halomicrobium katesii DSM 19301 prophage linear Cluster_124 Halobacteria_gi_484232361-1956327-2012832 hallmark;refseq 81;26;3;52 Viruses;dsDNA viruses no RNA stage;unknown;unknown;unknown;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Haladaptatus Haladaptatus paucihalophilus DX253 prophage linear Cluster_574 Halobacteria_gi_486396487-3990589-4003157 noncaudo 18;6;1;11 Viruses;ssDNA viruses;unknown;unknown;;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Natronorubrum Natronorubrum tibetense GA33 prophage linear Cluster_380 Halobacteria_gi_529076460-2194204-2235794 noncaudo 51;7;5;39 Viruses;dsDNA viruses no RNA stage;unclassified;unclassified;unknown;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Halorhabdus Halorhabdus tiamatea SARL4B prophage linear unclustered Halobacteria_gi_543936266 hallmark 45;4;1;40 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;T4likevirus;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Halorhabdus Halorhabdus tiamatea SARL4B extrachromosomal linear unclustered Halobacteria_gi_55376942-2036778-2048065 noncaudo 10;7;1;2 Viruses;ssDNA viruses;unknown;unknown;;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Haloarcula Haloarcula marismortui ATCC 43049 prophage linear Cluster_139 Halobacteria_gi_55376942-2136603-2147154 noncaudo 14;7;1;6 Viruses;ssDNA viruses;unknown;unknown;unknown;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Haloarcula Haloarcula marismortui ATCC 43049 prophage linear Cluster_139 Halobacteria_gi_564288321-22075-34920 noncaudo 17;7;;10 Viruses;ssDNA viruses;unknown;unknown;;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Haloarcula Haloarcula hispanica N601 prophage linear Cluster_124 Halobacteria_gi_564288321-2722282-2741295 noncaudo 27;9;1;17 Viruses;ssDNA viruses;unknown;unknown;unknown;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Haloarcula Haloarcula hispanica N601 prophage linear Cluster_139 Methanobacteria_gi_485039145 hallmark 32;6;4;22 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Archaea;Euryarchaeota;Methanobacteria;Methanobacteriales;Methanobacteriaceae;Methanobrevibacter Methanobrevibacter smithii TS145A extrachromosomal linear Cluster_191 Methanobacteria_gi_485039322 hallmark 33;5;3;25 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Archaea;Euryarchaeota;Methanobacteria;Methanobacteriales;Methanobacteriaceae;Methanobrevibacter Methanobrevibacter smithii TS145B extrachromosomal linear Cluster_191 Methanobacteria_gi_485039440 hallmark 27;4;2;21 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Archaea;Euryarchaeota;Methanobacteria;Methanobacteriales;Methanobacteriaceae;Methanobrevibacter Methanobrevibacter smithii TS146A extrachromosomal linear Cluster_191 Methanobacteria_gi_485039548 hallmark 31;5;4;22 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Archaea;Euryarchaeota;Methanobacteria;Methanobacteriales;Methanobacteriaceae;Methanobrevibacter Methanobrevibacter smithii TS146B extrachromosomal linear Cluster_191 Methanobacteria_gi_485039734 hallmark 24;3;1;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Archaea;Euryarchaeota;Methanobacteria;Methanobacteriales;Methanobacteriaceae;Methanobrevibacter Methanobrevibacter smithii TS146C extrachromosomal linear Cluster_191 Methanobacteria_gi_485039845 hallmark 31;6;3;22 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Archaea;Euryarchaeota;Methanobacteria;Methanobacteriales;Methanobacteriaceae;Methanobrevibacter Methanobrevibacter smithii TS146D extrachromosomal linear Cluster_191 Methanobacteria_gi_485039939 hallmark 51;8;3;40 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Archaea;Euryarchaeota;Methanobacteria;Methanobacteriales;Methanobacteriaceae;Methanobrevibacter Methanobrevibacter smithii TS146E extrachromosomal circular Cluster_191 Methanobacteria_gi_485040070 hallmark;refseq 10;4;1;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Archaea;Euryarchaeota;Methanobacteria;Methanobacteriales;Methanobacteriaceae;Methanobrevibacter Methanobrevibacter smithii TS147A extrachromosomal linear Cluster_191 Methanobacteria_gi_485041323 hallmark 23;3;2;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Archaea;Euryarchaeota;Methanobacteria;Methanobacteriales;Methanobacteriaceae;Methanobrevibacter Methanobrevibacter smithii TS96C extrachromosomal linear Cluster_191 Mollicutes_gi_162446888-614609-648901 hallmark;refseq 40;18;9;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Tenericutes;Mollicutes;Acholeplasmatales;Acholeplasmataceae;Acholeplasma Acholeplasma laidlawii PG-8A prophage linear Cluster_20 Mollicutes_gi_359402641-132443-163838 refseq 54;16;11;27 Viruses;ssDNA viruses;unknown;Inoviridae;Plectrovirus;unknown Bacteria;Tenericutes;Mollicutes;Entomoplasmatales;Spiroplasmataceae;Spiroplasma Spiroplasma melliferum KC3 prophage linear Cluster_171 Mollicutes_gi_359402641-271-5392 noncaudo 10;5;1;4 Viruses;ssDNA viruses;unknown;Inoviridae;Plectrovirus;unknown Bacteria;Tenericutes;Mollicutes;Entomoplasmatales;Spiroplasmataceae;Spiroplasma Spiroplasma melliferum KC3 prophage linear Cluster_171 Mollicutes_gi_359402641-303137-364512 refseq 97;23;20;54 Viruses;ssDNA viruses;unknown;Inoviridae;Plectrovirus;unknown Bacteria;Tenericutes;Mollicutes;Entomoplasmatales;Spiroplasmataceae;Spiroplasma Spiroplasma melliferum KC3 prophage linear Cluster_381 Mollicutes_gi_359402641-431409-437827 noncaudo 10;6;;4 Viruses;ssDNA viruses;unknown;Inoviridae;Plectrovirus;unknown Bacteria;Tenericutes;Mollicutes;Entomoplasmatales;Spiroplasmataceae;Spiroplasma Spiroplasma melliferum KC3 prophage linear unclustered Mollicutes_gi_359402641-604500-612253 refseq 13;4;2;7 Viruses;ssDNA viruses;unknown;Inoviridae;Plectrovirus;unknown Bacteria;Tenericutes;Mollicutes;Entomoplasmatales;Spiroplasmataceae;Spiroplasma Spiroplasma melliferum KC3 prophage linear Cluster_171 Mollicutes_gi_359402641-612273-628250 refseq 26;8;2;16 Viruses;ssDNA viruses;unknown;Inoviridae;Plectrovirus;unknown Bacteria;Tenericutes;Mollicutes;Entomoplasmatales;Spiroplasmataceae;Spiroplasma Spiroplasma melliferum KC3 prophage linear Cluster_381 Mollicutes_gi_359402641-710829-715321 noncaudo 10;6;;4 Viruses;ssDNA viruses;unknown;Inoviridae;Plectrovirus;unknown Bacteria;Tenericutes;Mollicutes;Entomoplasmatales;Spiroplasmataceae;Spiroplasma Spiroplasma melliferum KC3 prophage linear Cluster_171 Mollicutes_gi_359403342-460-61809 refseq 98;16;20;62 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;T4likevirus;unknown Bacteria;Tenericutes;Mollicutes;Entomoplasmatales;Spiroplasmataceae;Spiroplasma Spiroplasma melliferum KC3 prophage linear Cluster_171 Mollicutes_gi_359403488-171727-178398 noncaudo 10;5;1;4 Viruses;ssDNA viruses;unknown;Inoviridae;Plectrovirus;unknown Bacteria;Tenericutes;Mollicutes;Entomoplasmatales;Spiroplasmataceae;Spiroplasma Spiroplasma melliferum KC3 prophage linear Cluster_171 Mollicutes_gi_359403488-358807-364056 refseq 10;7;;3 Viruses;ssDNA viruses;unknown;Inoviridae;Plectrovirus;unknown Bacteria;Tenericutes;Mollicutes;Entomoplasmatales;Spiroplasmataceae;Spiroplasma Spiroplasma melliferum KC3 prophage linear Cluster_171 Mollicutes_gi_359403488-375694-377303 refseq 4;4;; Viruses;ssDNA viruses;unknown;Inoviridae;Plectrovirus;unknown Bacteria;Tenericutes;Mollicutes;Entomoplasmatales;Spiroplasmataceae;Spiroplasma Spiroplasma melliferum KC3 prophage linear Cluster_171 Mollicutes_gi_438119578-84435-89423 noncaudo 10;4;;6 Viruses;ssDNA viruses;unknown;Inoviridae;Plectrovirus;unknown Bacteria;Tenericutes;Mollicutes;Entomoplasmatales;Spiroplasmataceae;Spiroplasma Spiroplasma melliferum IPMB4A prophage linear Cluster_381 Negativicutes_gi_282848843-4123-50458 hallmark;refseq;vdb 53;22;3;28 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Firmicutes;Negativicutes;Selenomonadales;Veillonellaceae;Veillonella Veillonella parvula ATCC 17745 prophage linear Cluster_88 Negativicutes_gi_294791573-831244-870566 hallmark;vdb 57;23;2;32 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Negativicutes;Selenomonadales;Veillonellaceae;Veillonella Veillonella sp. 6_1_27 prophage linear Cluster_318 Negativicutes_gi_303229258 hallmark;refseq 50;17;7;26 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Negativicutes;Selenomonadales;Veillonellaceae;Veillonella Veillonella atypica ACS-134-V-Col7a extrachromosomal linear Cluster_340 Negativicutes_gi_312899164 hallmark;refseq 95;26;27;42 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Negativicutes;Selenomonadales;Veillonellaceae;Megasphaera Megasphaera micronuciformis F0359 extrachromosomal linear Cluster_318 Negativicutes_gi_313892420 hallmark 57;17;8;32 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Negativicutes;Selenomonadales;Veillonellaceae;Dialister Dialister microaerophilus UPII 345-E extrachromosomal linear Cluster_340 Negativicutes_gi_313892477 hallmark;refseq 45;16;4;25 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;T7likevirus;unknown Bacteria;Firmicutes;Negativicutes;Selenomonadales;Veillonellaceae;Dialister Dialister microaerophilus UPII 345-E extrachromosomal linear Cluster_58 Negativicutes_gi_383080718 hallmark 44;12;10;22 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Negativicutes;Selenomonadales;Veillonellaceae;Selenomonas Selenomonas ruminantium subsp. lactilytica TAM6421 extrachromosomal linear Cluster_34 Negativicutes_gi_383755655 hallmark 90;19;8;63 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Firmicutes;Negativicutes;Selenomonadales;Veillonellaceae;Selenomonas Selenomonas ruminantium subsp. lactilytica TAM6421 extrachromosomal linear Cluster_549 Negativicutes_gi_383755757 hallmark 96;15;6;75 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Firmicutes;Negativicutes;Selenomonadales;Veillonellaceae;Selenomonas Selenomonas ruminantium subsp. lactilytica TAM6421 extrachromosomal linear Cluster_549 Negativicutes_gi_401563568 hallmark;refseq 13;7;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Firmicutes;Negativicutes;Selenomonadales;Veillonellaceae;Selenomonas Selenomonas sp. FOBRC6 extrachromosomal linear Cluster_42 Negativicutes_gi_401563847 hallmark 23;7;6;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Negativicutes;Selenomonadales;Veillonellaceae;Selenomonas Selenomonas sp. FOBRC6 extrachromosomal linear Cluster_42 Negativicutes_gi_401565811 hallmark 11;5;3;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Firmicutes;Negativicutes;Selenomonadales;Veillonellaceae;Selenomonas Selenomonas sp. FOBRC6 extrachromosomal linear Cluster_42 Negativicutes_gi_402304139 hallmark 66;16;16;34 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Negativicutes;Selenomonadales;Veillonellaceae;Selenomonas Selenomonas sp. FOBRC9 extrachromosomal linear Cluster_48 Negativicutes_gi_402835113 hallmark 27;9;4;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Firmicutes;Negativicutes;Selenomonadales;Veillonellaceae;Selenomonas Selenomonas sp. CM52 extrachromosomal linear Cluster_42 Negativicutes_gi_402835227 hallmark 17;5;1;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Negativicutes;Selenomonadales;Veillonellaceae;Selenomonas Selenomonas sp. CM52 extrachromosomal linear Cluster_42 Negativicutes_gi_416999523 hallmark;refseq 53;18;6;29 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Negativicutes;Selenomonadales;Veillonellaceae;Veillonella Veillonella parvula ACS-068-V-Sch12 extrachromosomal linear Cluster_340 Negativicutes_gi_421057552 hallmark;refseq 36;16;2;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Negativicutes;Selenomonadales;Veillonellaceae;Pelosinus Pelosinus fermentans B3 extrachromosomal linear Cluster_569 Negativicutes_gi_421063393 hallmark;refseq 45;17;2;26 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Negativicutes;Selenomonadales;Veillonellaceae;Pelosinus Pelosinus fermentans A12 extrachromosomal linear Cluster_569 Negativicutes_gi_444335065 hallmark 19;5;3;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Negativicutes;Selenomonadales;Veillonellaceae;Selenomonas Selenomonas sp. oral taxon 138 str. F0429 extrachromosomal linear Cluster_42 Negativicutes_gi_444381513 hallmark 59;17;13;29 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Negativicutes;Selenomonadales;Veillonellaceae;Veillonella Veillonella atypica KON extrachromosomal linear Cluster_340 Negativicutes_gi_484005732 refseq 18;12;;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Negativicutes;Selenomonadales;Veillonellaceae;Pelosinus Pelosinus sp. HCF1 extrachromosomal linear Cluster_308 Negativicutes_gi_484007575 hallmark 25;11;6;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Negativicutes;Selenomonadales;Veillonellaceae;Anaeromusa Anaeromusa acidaminophila DSM 3853 extrachromosomal linear Cluster_42 Negativicutes_gi_484007587 hallmark 21;8;3;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Negativicutes;Selenomonadales;Veillonellaceae;Anaeromusa Anaeromusa acidaminophila DSM 3853 extrachromosomal linear Cluster_42 Negativicutes_gi_484007677 refseq;vdb 24;4;1;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Negativicutes;Selenomonadales;Veillonellaceae;Anaeromusa Anaeromusa acidaminophila DSM 3853 extrachromosomal linear Cluster_158 Negativicutes_gi_485070723 refseq 29;10;6;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Firmicutes;Negativicutes;Selenomonadales;Veillonellaceae;Selenomonas Selenomonas bovis DSM 23594 extrachromosomal linear Cluster_42 Negativicutes_gi_485070738 hallmark;refseq;vdb 19;5;7;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Negativicutes;Selenomonadales;Veillonellaceae;Selenomonas Selenomonas bovis DSM 23594 extrachromosomal linear Cluster_34 Negativicutes_gi_485070744 hallmark 21;7;5;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Negativicutes;Selenomonadales;Veillonellaceae;Selenomonas Selenomonas bovis DSM 23594 extrachromosomal linear Cluster_42 Negativicutes_gi_485070754 hallmark 24;8;2;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Negativicutes;Selenomonadales;Veillonellaceae;Selenomonas Selenomonas bovis DSM 23594 extrachromosomal linear Cluster_50 Negativicutes_gi_485070785 hallmark 15;5;3;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Negativicutes;Selenomonadales;Veillonellaceae;Selenomonas Selenomonas bovis DSM 23594 extrachromosomal linear Cluster_42 Negativicutes_gi_485071342 hallmark;refseq 60;29;6;25 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Negativicutes;Selenomonadales;Veillonellaceae;Zymophilus Zymophilus raffinosivorans DSM 20765 extrachromosomal circular Cluster_15 Negativicutes_gi_520878374-0-29341 hallmark 46;9;8;29 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Negativicutes;Selenomonadales;Veillonellaceae;Megasphaera Megasphaera sp. NM10 prophage linear Cluster_48 Negativicutes_gi_520878529 hallmark 96;24;16;56 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Negativicutes;Selenomonadales;Veillonellaceae;Megasphaera Megasphaera sp. NM10 extrachromosomal linear Cluster_486 Negativicutes_gi_522416322 hallmark 97;24;16;57 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Negativicutes;Selenomonadales;Veillonellaceae;Megasphaera Megasphaera sp. BL7 extrachromosomal linear Cluster_486 Negativicutes_gi_522418631-4500-29331 hallmark;refseq 44;17;3;24 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Firmicutes;Negativicutes;Selenomonadales;Veillonellaceae;Megasphaera Megasphaera sp. BL7 prophage linear Cluster_141 Negativicutes_gi_522420791 hallmark 30;7;5;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Firmicutes;Negativicutes;Selenomonadales;Veillonellaceae;Megasphaera Megasphaera sp. BL7 extrachromosomal linear Cluster_48 Negativicutes_gi_545446786 hallmark 45;13;13;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Negativicutes;Selenomonadales;Veillonellaceae;Selenomonas Selenomonas sp. oral taxon 892 str. F0426 extrachromosomal linear Cluster_42 Negativicutes_gi_545446850 hallmark 33;11;6;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Negativicutes;Selenomonadales;Veillonellaceae;Selenomonas Selenomonas sp. oral taxon 892 str. F0426 extrachromosomal linear Cluster_42 Negativicutes_gi_545446879 hallmark 25;5;4;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Negativicutes;Selenomonadales;Veillonellaceae;Selenomonas Selenomonas sp. oral taxon 892 str. F0426 extrachromosomal linear Cluster_42 Negativicutes_gi_545448349 refseq 15;7;5;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Negativicutes;Selenomonadales;Veillonellaceae;Selenomonas Selenomonas sp. oral taxon 892 str. F0426 extrachromosomal linear Cluster_17 Negativicutes_gi_545588341 hallmark 23;9;2;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Negativicutes;Selenomonadales;Acidaminococcaceae;Phascolarctobacterium Phascolarctobacterium sp. CAG:207 extrachromosomal linear Cluster_440 Negativicutes_gi_545592408-57929-84582 hallmark 46;14;1;31 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Firmicutes;Negativicutes;Selenomonadales;Acidaminococcaceae;Phascolarctobacterium Phascolarctobacterium succinatutens CAG:287 prophage linear Cluster_7 Negativicutes_gi_546348709 refseq;vdb 9;2;;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Firmicutes;Negativicutes;Selenomonadales;Veillonellaceae;Veillonella Veillonella sp. CAG:933 extrachromosomal linear unclustered Negativicutes_gi_546348773 hallmark;refseq 26;11;5;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Negativicutes;Selenomonadales;Veillonellaceae;Veillonella Veillonella sp. CAG:933 extrachromosomal linear Cluster_429 Negativicutes_gi_546349318-12163-37890 hallmark;refseq;vdb 41;20;3;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Negativicutes;Selenomonadales;Veillonellaceae;Veillonella Veillonella sp. CAG:933 prophage linear Cluster_57 Negativicutes_gi_546349956-16649-73610 hallmark 75;19;16;40 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Negativicutes;Selenomonadales;Veillonellaceae;Veillonella Veillonella sp. CAG:933 prophage linear Cluster_48 Negativicutes_gi_546350179 hallmark;refseq 61;18;16;27 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Negativicutes;Selenomonadales;Veillonellaceae;Veillonella Veillonella sp. CAG:933 extrachromosomal linear Cluster_15 Negativicutes_gi_546351067 hallmark 39;11;4;24 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Negativicutes;Selenomonadales;Veillonellaceae;Veillonella Veillonella sp. CAG:933 extrachromosomal linear Cluster_318 Negativicutes_gi_547818715 hallmark;refseq 15;11;1;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Negativicutes;Selenomonadales;Acidaminococcaceae;Acidaminococcus Acidaminococcus intestini CAG:325 extrachromosomal linear Cluster_15 Negativicutes_gi_548123136 hallmark 17;7;5;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Negativicutes;Selenomonadales;Veillonellaceae;Dialister Dialister sp. CAG:357 extrachromosomal linear Cluster_42 Negativicutes_gi_548307056-100-19670 hallmark;refseq;vdb 28;15;1;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Negativicutes;Selenomonadales;Veillonellaceae;Megasphaera Megasphaera elsdenii CAG:570 prophage linear Cluster_88 Negativicutes_gi_548327455-28990-48298 hallmark;refseq;vdb 27;13;4;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Negativicutes;Selenomonadales;Veillonellaceae;Dialister Dialister sp. CAG:588 prophage linear Cluster_6 Negativicutes_gi_548327878 hallmark 36;7;9;20 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Firmicutes;Negativicutes;Selenomonadales;Veillonellaceae;Dialister Dialister sp. CAG:588 extrachromosomal linear Cluster_318 Negativicutes_gi_553307560 hallmark;refseq 28;13;1;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Negativicutes;Selenomonadales;Veillonellaceae;Megasphaera Megasphaera sp. BV3C16-1 extrachromosomal linear Cluster_55 Negativicutes_gi_553308015 hallmark;refseq 24;15;2;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;Negativicutes;Selenomonadales;Veillonellaceae;Megasphaera Megasphaera sp. BV3C16-1 extrachromosomal linear Cluster_15 Negativicutes_gi_553308188-0-19186 refseq;vdb 29;11;5;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;Negativicutes;Selenomonadales;Veillonellaceae;Megasphaera Megasphaera sp. BV3C16-1 prophage linear Cluster_318 Negativicutes_gi_553308696 hallmark;refseq;vdb 21;9;6;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Firmicutes;Negativicutes;Selenomonadales;Veillonellaceae;Megasphaera Megasphaera sp. BV3C16-1 extrachromosomal linear Cluster_34 Negativicutes_gi_553309472-106454-132716 hallmark;refseq;vdb 27;8;9;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;Negativicutes;Selenomonadales;Veillonellaceae;Megasphaera Megasphaera sp. BV3C16-1 prophage linear Cluster_42 Nitrospinia_gi_484200773 hallmark;vdb 15;3;4;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Nitrospinae;Nitrospinia;Nitrospinales;Nitrospinaceae;Nitrospina Nitrospina sp. SCGC AAA288-L16 extrachromosomal linear Cluster_1 Planctomycetia_gi_163804191 hallmark 73;6;12;55 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Tunalikevirus;unknown Bacteria;Planctomycetes;Planctomycetia;Planctomycetales;Planctomycetaceae;Gemmata Gemmata obscuriglobus UQM 2246 extrachromosomal linear Cluster_168 Planctomycetia_gi_163804221 hallmark 52;2;3;47 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;T4likevirus;unknown Bacteria;Planctomycetes;Planctomycetia;Planctomycetales;Planctomycetaceae;Gemmata Gemmata obscuriglobus UQM 2246 extrachromosomal linear unclustered Planctomycetia_gi_163804224 hallmark 47;1;5;41 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Planctomycetes;Planctomycetia;Planctomycetales;Planctomycetaceae;Gemmata Gemmata obscuriglobus UQM 2246 extrachromosomal linear unclustered Planctomycetia_gi_163804432 hallmark 12;2;;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Planctomycetes;Planctomycetia;Planctomycetales;Planctomycetaceae;Gemmata Gemmata obscuriglobus UQM 2246 extrachromosomal linear unclustered Planctomycetia_gi_163804434 hallmark 13;2;;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Planctomycetes;Planctomycetia;Planctomycetales;Planctomycetaceae;Gemmata Gemmata obscuriglobus UQM 2246 extrachromosomal linear unclustered Planctomycetia_gi_163804441 refseq 4;3;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Planctomycetes;Planctomycetia;Planctomycetales;Planctomycetaceae;Gemmata Gemmata obscuriglobus UQM 2246 extrachromosomal linear Cluster_0 Planctomycetia_gi_296051576 hallmark 55;7;6;42 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Planctomycetes;Planctomycetia;Planctomycetales;Planctomycetaceae;Planctomyces Planctomyces limnophilus DSM 3776 extrachromosomal linear Cluster_20 Planctomycetia_gi_470885976 hallmark;vdb 27;1;6;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Planctomycetes;Planctomycetia;Planctomycetales;Planctomycetaceae;Rhodopirellula Rhodopirellula sp. SWK7 extrachromosomal linear unclustered SAR406_cluster_bacterium_SCGC_AAA160-C11_ID_19 refseq 24;11;;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Marinimicrobia;unknown;unknown;unknown;unknown SAR406_cluster_bacterium_SCGC_AAA160-C11 extrachromosomal linear Cluster_323 SAR406_cluster_bacterium_SCGC_AAA160-C11_ID_25 refseq 65;14;1;50 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Marinimicrobia;unknown;unknown;unknown;unknown SAR406_cluster_bacterium_SCGC_AAA160-C11 extrachromosomal linear unclustered SAR406_cluster_bacterium_SCGC_AAA160-I06_ID_23 refseq 16;6;1;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;T4likevirus;unknown Bacteria;Marinimicrobia;unknown;unknown;unknown;unknown SAR406_cluster_bacterium_SCGC_AAA160-I06 extrachromosomal linear unclustered SAR406_cluster_bacterium_sp_SCGC_AAA257-N23_ID_405 hallmark 42;6;2;34 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;T4likevirus;unknown Bacteria;Marinimicrobia;unknown;unknown;unknown;unknown SAR406_cluster_bacterium_sp_SCGC_AAA257-N23 extrachromosomal linear Cluster_344 Sphingobacteriia_gi_408542838 hallmark;refseq 40;11;4;25 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Bacteroidetes;Sphingobacteriia;Sphingobacteriales;Sphingobacteriaceae;Pedobacter Pedobacter agri PB92 extrachromosomal linear Cluster_330 Sphingobacteriia_gi_408542970 hallmark 14;4;1;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Bacteroidetes;Sphingobacteriia;Sphingobacteriales;Sphingobacteriaceae;Pedobacter Pedobacter agri PB92 extrachromosomal linear unclustered Sphingobacteriia_gi_544764751 hallmark 27;1;;26 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;T4likevirus;unknown Bacteria;Bacteroidetes;Sphingobacteriia;Sphingobacteriales;Sphingobacteriaceae;Sphingobacterium Sphingobacterium sp. IITKGP-BTPF85 extrachromosomal linear Cluster_599 Spirochaetia_gi_359585655 hallmark 96;10;15;71 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira licerasiae serovar Varillal str. MMD0835 extrachromosomal circular Cluster_61 Spirochaetia_gi_410450997 hallmark 49;6;3;40 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira sp. Fiocruz LV3954 extrachromosomal linear Cluster_213 Spirochaetia_gi_410942028 hallmark 96;16;9;71 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira noguchii str. 2006001870 extrachromosomal linear Cluster_61 Spirochaetia_gi_417776938 hallmark 49;7;8;34 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira interrogans str. 2002000621 extrachromosomal linear Cluster_147 Spirochaetia_gi_417778209 hallmark 61;8;11;42 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira weilii str. 2006001853 extrachromosomal linear Cluster_121 Spirochaetia_gi_417778601 hallmark 68;5;12;51 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira weilii str. 2006001853 extrachromosomal linear Cluster_146 Spirochaetia_gi_418714845 hallmark 106;14;9;83 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira interrogans str. UI 08452 extrachromosomal linear Cluster_110 Spirochaetia_gi_418727951 hallmark 102;12;11;79 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira interrogans str. UI 12758 extrachromosomal linear Cluster_110 Spirochaetia_gi_418730036 hallmark 24;3;3;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira interrogans str. UI 12758 extrachromosomal linear Cluster_61 Spirochaetia_gi_418745953 hallmark 56;6;9;41 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira santarosai str. CBC379 extrachromosomal linear Cluster_213 Spirochaetia_gi_418747329 hallmark 76;9;10;57 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira santarosai str. CBC379 extrachromosomal linear Cluster_110 Spirochaetia_gi_418749308 hallmark 98;10;15;73 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira licerasiae str. MMD4847 extrachromosomal linear Cluster_61 Spirochaetia_gi_418757795 hallmark 97;10;15;72 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira licerasiae serovar Varillal str. VAR 010 extrachromosomal linear Cluster_61 Spirochaetia_gi_421088245 hallmark 29;1;2;26 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Twortlikevirus;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira kirschneri str. 200802841 extrachromosomal linear Cluster_108 Spirochaetia_gi_421100964 hallmark 64;9;9;46 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira borgpetersenii str. 200901122 extrachromosomal linear Cluster_61 Spirochaetia_gi_421113879 hallmark 57;9;4;44 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira santarosai str. JET extrachromosomal linear Cluster_61 Spirochaetia_gi_429122748 hallmark 34;6;4;24 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Brachyspiraceae;Brachyspira Brachyspira hampsonii 30446 extrachromosomal linear Cluster_42 Spirochaetia_gi_452694705 hallmark 34;9;3;22 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira interrogans serovar Canicola str. HAI0024 extrachromosomal linear Cluster_121 Spirochaetia_gi_452712070 hallmark 37;10;4;23 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira interrogans serovar Bataviae str. 2006006976 extrachromosomal linear Cluster_121 Spirochaetia_gi_452712343 hallmark 34;9;3;22 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira interrogans serovar Bataviae str. 2006006959 extrachromosomal linear Cluster_121 Spirochaetia_gi_452713167 hallmark 94;9;8;77 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira interrogans serovar Lai str. Langkawi extrachromosomal linear Cluster_110 Spirochaetia_gi_452713479 hallmark 34;9;3;22 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira interrogans serovar Bataviae str. Swart extrachromosomal linear Cluster_121 Spirochaetia_gi_452713792 hallmark 25;6;3;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira interrogans serovar Bataviae str. Kariadi-Satu extrachromosomal linear Cluster_121 Spirochaetia_gi_452719071 hallmark 59;11;4;44 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira interrogans serovar Bataviae str. UT234 extrachromosomal linear Cluster_61 Spirochaetia_gi_452719074 hallmark 27;5;3;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira interrogans serovar Bataviae str. UT234 extrachromosomal linear Cluster_61 Spirochaetia_gi_452719423-4196-47267 hallmark 62;3;5;54 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira interrogans serovar Bataviae str. UT234 prophage linear Cluster_108 Spirochaetia_gi_452719437 hallmark 33;4;4;25 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Twortlikevirus;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira interrogans serovar Bataviae str. UT234 extrachromosomal linear Cluster_306 Spirochaetia_gi_452719472-3111-58974 hallmark 63;12;3;48 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira interrogans serovar Medanensis str. L0887 prophage linear Cluster_61 Spirochaetia_gi_452719610-4196-47267 hallmark 62;3;5;54 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira interrogans serovar Medanensis str. L0887 prophage linear Cluster_108 Spirochaetia_gi_458810665 hallmark 62;12;3;47 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira santarosai str. ST188 extrachromosomal linear Cluster_61 Spirochaetia_gi_469807565 hallmark 63;11;4;48 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Twortlikevirus;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira interrogans serovar Pyrogenes str. 200701872 extrachromosomal linear Cluster_147 Spirochaetia_gi_469811775 hallmark 44;1;4;39 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Twortlikevirus;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira interrogans serovar Pyrogenes str. 200701872 extrachromosomal linear Cluster_108 Spirochaetia_gi_469839090 hallmark 13;2;1;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Twortlikevirus;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira santarosai str. 2000030832 extrachromosomal linear Cluster_146 Spirochaetia_gi_469851180 hallmark 92;11;8;73 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira interrogans serovar Zanoni str. LT2156 extrachromosomal linear Cluster_110 Spirochaetia_gi_469868102 hallmark 17;3;1;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Twortlikevirus;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira interrogans serovar Medanensis str. L0448 extrachromosomal linear Cluster_306 Spirochaetia_gi_469875161 hallmark 95;10;9;76 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira interrogans str. L0996 extrachromosomal linear Cluster_110 Spirochaetia_gi_469897885 hallmark 71;5;7;59 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira interrogans serovar Grippotyphosa str. UI 12764 extrachromosomal linear Cluster_146 Spirochaetia_gi_469900911 hallmark 36;5;4;27 Viruses;unclassified;unclassified;unclassified;unclassified;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira interrogans serovar Medanensis str. UT053 extrachromosomal linear Cluster_61 Spirochaetia_gi_469902210 hallmark 23;1;3;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Twortlikevirus;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira interrogans serovar Medanensis str. UT053 extrachromosomal linear Cluster_108 Spirochaetia_gi_469903547 hallmark 82;11;5;66 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira interrogans serovar Medanensis str. UT053 extrachromosomal linear Cluster_110 Spirochaetia_gi_469903889-9807-59626 hallmark 57;11;2;44 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira interrogans serovar Medanensis str. UT053 prophage linear Cluster_61 Spirochaetia_gi_469910345 hallmark 22;3;2;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Twortlikevirus;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira interrogans str. FPW1039 extrachromosomal linear Cluster_344 Spirochaetia_gi_469912333 hallmark 19;3;3;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Twortlikevirus;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira interrogans str. FPW1039 extrachromosomal linear Cluster_306 Spirochaetia_gi_469913730 hallmark 38;6;4;28 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira interrogans str. FPW1039 extrachromosomal linear Cluster_61 Spirochaetia_gi_469943774 hallmark 62;7;8;47 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira noguchii str. 2007001578 extrachromosomal linear Cluster_108 Spirochaetia_gi_469958679 hallmark 52;6;5;41 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira santarosai serovar Arenal str. MAVJ 401 extrachromosomal linear Cluster_213 Spirochaetia_gi_469959492 hallmark 44;10;7;27 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira santarosai serovar Arenal str. MAVJ 401 extrachromosomal linear Cluster_121 Spirochaetia_gi_469982396 hallmark 61;6;4;51 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira interrogans serovar Pyrogenes str. R168 extrachromosomal circular Cluster_110 Spirochaetia_gi_469982505 hallmark;vdb 21;5;5;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira weilii str. UI 13098 extrachromosomal linear Cluster_121 Spirochaetia_gi_469983633 hallmark 14;4;;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira weilii str. UI 13098 extrachromosomal linear Cluster_61 Spirochaetia_gi_469984429 hallmark 36;7;6;23 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira weilii str. UI 13098 extrachromosomal linear Cluster_61 Spirochaetia_gi_469985170 hallmark 26;5;2;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira weilii str. UI 13098 extrachromosomal linear Cluster_61 Spirochaetia_gi_469985491 hallmark 55;5;4;46 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira weilii str. UI 13098 extrachromosomal linear Cluster_108 Spirochaetia_gi_469985581 hallmark 61;12;6;43 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira weilii str. UI 13098 extrachromosomal linear Cluster_61 Spirochaetia_gi_469988863 hallmark 94;11;10;73 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira interrogans serovar Pomona str. UT364 extrachromosomal circular Cluster_110 Spirochaetia_gi_469993240 hallmark 57;13;6;38 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira santarosai str. 200702252 extrachromosomal linear Cluster_297 Spirochaetia_gi_470002519 hallmark 63;10;4;49 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira santarosai str. CBC523 extrachromosomal linear Cluster_61 Spirochaetia_gi_470004712 hallmark 63;6;5;52 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira santarosai str. CBC523 extrachromosomal linear Cluster_110 Spirochaetia_gi_470007918 hallmark 17;3;2;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira santarosai str. HAI134 extrachromosomal linear Cluster_61 Spirochaetia_gi_470008191 hallmark 52;9;6;37 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira santarosai str. HAI134 extrachromosomal linear Cluster_61 Spirochaetia_gi_470010710 hallmark 37;7;;30 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira interrogans serovar Bataviae str. HAI135 extrachromosomal linear Cluster_110 Spirochaetia_gi_470014903 hallmark 37;7;1;29 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira interrogans serovar Bataviae str. HAI135 extrachromosomal linear Cluster_147 Spirochaetia_gi_470028642 hallmark 80;14;7;59 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira noguchii serovar Autumnalis str. ZUN142 extrachromosomal linear Cluster_61 Spirochaetia_gi_470034064 hallmark 82;11;9;62 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Twortlikevirus;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira santarosai str. ZUN179 extrachromosomal linear Cluster_110 Spirochaetia_gi_470038799 hallmark;vdb 70;10;14;46 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira borgpetersenii serovar Mini str. 200901116 extrachromosomal linear Cluster_61 Spirochaetia_gi_470044574 hallmark 100;16;11;73 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira interrogans str. HAI1536 extrachromosomal linear Cluster_61 Spirochaetia_gi_470053319 hallmark 18;3;;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira santarosai str. CBC1416 extrachromosomal linear Cluster_213 Spirochaetia_gi_470057205 hallmark 34;3;4;27 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira borgpetersenii serovar Pomona str. 200901868 extrachromosomal linear Cluster_146 Spirochaetia_gi_470061984 hallmark 24;3;1;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Twortlikevirus;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira kirschneri str. 200803703 extrachromosomal linear Cluster_344 Spirochaetia_gi_470062082 hallmark 24;2;1;21 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Twortlikevirus;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira kirschneri str. 200803703 extrachromosomal linear Cluster_108 Spirochaetia_gi_470064885 hallmark 38;2;2;34 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira kirschneri str. 200803703 extrachromosomal linear Cluster_108 Spirochaetia_gi_470071362 hallmark 50;5;4;41 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Twortlikevirus;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira kirschneri str. 200801925 extrachromosomal linear Cluster_108 Spirochaetia_gi_470078251 hallmark 77;5;4;68 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira kirschneri str. 200801774 extrachromosomal linear Cluster_110 Spirochaetia_gi_470082569-0-43705 hallmark 61;4;6;51 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira noguchii str. 2001034031 prophage linear Cluster_108 Spirochaetia_gi_470906456 hallmark 47;6;2;39 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira sp. Fiocruz LV4135 extrachromosomal linear Cluster_213 Spirochaetia_gi_472226947 hallmark 35;6;5;24 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira santarosai str. CBC1531 extrachromosomal linear Cluster_297 Spirochaetia_gi_472227124 hallmark 49;6;4;39 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira santarosai str. CBC1531 extrachromosomal linear Cluster_213 Spirochaetia_gi_472227499 hallmark 17;5;1;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira santarosai str. CBC1531 extrachromosomal linear Cluster_319 Spirochaetia_gi_472228980 hallmark 58;6;5;47 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira santarosai str. CBC1531 extrachromosomal linear Cluster_146 Spirochaetia_gi_475908565-4819-46578 hallmark 54;11;7;36 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira noguchii str. Cascata prophage linear Cluster_297 Spirochaetia_gi_475910415 hallmark 93;9;7;77 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira noguchii str. Cascata extrachromosomal circular Cluster_110 Spirochaetia_gi_477562971 hallmark 48;6;5;37 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Twortlikevirus;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira interrogans str. 2002000626 extrachromosomal linear Cluster_146 Spirochaetia_gi_477563916 hallmark 74;11;13;50 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira interrogans str. 2002000626 extrachromosomal linear Cluster_147 Spirochaetia_gi_477565433 hallmark 73;4;13;56 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira interrogans str. 2002000626 extrachromosomal linear Cluster_108 Spirochaetia_gi_477572989 hallmark 18;4;;14 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira interrogans serovar Australis str. 200703203 extrachromosomal linear Cluster_319 Spirochaetia_gi_477576147 hallmark 29;6;3;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira interrogans serovar Australis str. 200703203 extrachromosomal linear Cluster_147 Spirochaetia_gi_480994564 hallmark 26;5;1;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira interrogans serovar Szwajizak str. Szwajizak extrachromosomal linear Cluster_319 Spirochaetia_gi_480994565 hallmark 86;6;24;56 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira interrogans serovar Szwajizak str. Szwajizak extrachromosomal linear Cluster_147 Spirochaetia_gi_480994577 hallmark 41;6;6;29 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira interrogans serovar Szwajizak str. Szwajizak extrachromosomal linear Cluster_61 Spirochaetia_gi_480994689 hallmark 44;7;9;28 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira interrogans serovar Szwajizak str. Szwajizak extrachromosomal linear Cluster_306 Spirochaetia_gi_480994706 hallmark 82;6;18;58 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira interrogans serovar Szwajizak str. Szwajizak extrachromosomal linear Cluster_146 Spirochaetia_gi_480995175 hallmark 15;1;1;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Twortlikevirus;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira interrogans serovar Naam str. Naam extrachromosomal linear Cluster_344 Spirochaetia_gi_480995254 hallmark 57;12;3;42 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira interrogans serovar Naam str. Naam extrachromosomal linear Cluster_147 Spirochaetia_gi_481017885 hallmark 30;6;5;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira interrogans serovar Pyrogenes str. Sri Lanka 30 extrachromosomal linear Cluster_306 Spirochaetia_gi_481017919 hallmark 61;3;4;54 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira interrogans serovar Pyrogenes str. Sri Lanka 30 extrachromosomal linear Cluster_108 Spirochaetia_gi_481017960 hallmark 30;5;3;22 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira interrogans serovar Pyrogenes str. Sri Lanka 30 extrachromosomal linear Cluster_61 Spirochaetia_gi_481018001 hallmark 59;6;3;50 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira interrogans serovar Pyrogenes str. Sri Lanka 30 extrachromosomal circular Cluster_110 Spirochaetia_gi_481018113 hallmark 66;3;4;59 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira interrogans serovar Pyrogenes str. Sri Lanka 39 extrachromosomal linear Cluster_108 Spirochaetia_gi_481018194 hallmark 89;13;8;68 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira interrogans serovar Pyrogenes str. Sri Lanka 39 extrachromosomal circular Cluster_110 Spirochaetia_gi_481018313 hallmark 82;7;9;66 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;;unclassified Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira interrogans serovar Pyrogenes str. Sri Lanka 46 extrachromosomal circular Cluster_110 Spirochaetia_gi_481018353 hallmark 52;12;5;35 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira interrogans serovar Pyrogenes str. Sri Lanka 46 extrachromosomal linear Cluster_297 Spirochaetia_gi_481018412 hallmark 66;3;5;58 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira interrogans serovar Pyrogenes str. Sri Lanka 46 extrachromosomal linear Cluster_108 Spirochaetia_gi_481032797 hallmark 31;4;7;20 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira santarosai serovar Szwajizak str. Oregon extrachromosomal linear Cluster_297 Spirochaetia_gi_481032833 hallmark 52;7;4;41 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira santarosai serovar Szwajizak str. Oregon extrachromosomal linear Cluster_213 Spirochaetia_gi_482789361 hallmark 51;5;2;44 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira santarosai serovar Arenal str. 7 extrachromosomal linear Cluster_108 Spirochaetia_gi_482789715 hallmark 54;11;3;40 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira santarosai serovar Arenal str. 7 extrachromosomal linear Cluster_61 Spirochaetia_gi_483581511 hallmark 58;13;4;41 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira borgpetersenii serovar Kenya str. TE 0159 extrachromosomal linear Cluster_147 Spirochaetia_gi_483585405 hallmark 47;10;2;35 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira weilii str. LNT 1194 extrachromosomal linear Cluster_61 Spirochaetia_gi_483585556 hallmark;vdb 14;2;2;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira weilii str. LNT 1194 extrachromosomal linear Cluster_121 Spirochaetia_gi_483599522 hallmark 51;4;6;41 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira weilii str. LNT 1194 extrachromosomal linear Cluster_146 Spirochaetia_gi_483610524 hallmark 31;8;4;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira weilii str. UI 14631 extrachromosomal linear Cluster_121 Spirochaetia_gi_483610574 hallmark 61;10;7;44 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira weilii str. UI 14631 extrachromosomal linear Cluster_61 Spirochaetia_gi_483618573 hallmark 47;10;2;35 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira weilii str. UI 14631 extrachromosomal linear Cluster_61 Spirochaetia_gi_484076454 hallmark 53;15;14;24 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Spirochaetaceae;Spirochaeta Spirochaeta bajacaliforniensis DSM 16054 extrachromosomal linear Cluster_3 Spirochaetia_gi_486406274 hallmark;vdb 14;1;4;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Brachyspiraceae;Brachyspira Brachyspira innocens ATCC 29796 extrachromosomal linear Cluster_2 Spirochaetia_gi_486406309 hallmark 13;4;1;8 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Brachyspiraceae;Brachyspira Brachyspira innocens ATCC 29796 extrachromosomal linear Cluster_2 Spirochaetia_gi_486406599 hallmark 25;4;5;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Brachyspiraceae;Brachyspira Brachyspira innocens ATCC 29796 extrachromosomal linear Cluster_4 Spirochaetia_gi_514398137 hallmark 63;4;8;51 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Hpunalikevirus;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira noguchii str. 1993005606 extrachromosomal linear Cluster_108 Spirochaetia_gi_523624895-11-36720 hallmark 56;11;5;40 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira kirschneri serovar Bulgarica str. Nikolaevo prophage linear Cluster_121 Spirochaetia_gi_523625048 hallmark 70;11;12;47 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira kirschneri serovar Bulgarica str. Nikolaevo extrachromosomal linear Cluster_121 Spirochaetia_gi_523625694-72-38835 hallmark 57;11;5;41 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira kirschneri serovar Bulgarica str. Nikolaevo prophage linear Cluster_121 Spirochaetia_gi_523627096 hallmark 56;12;5;39 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira sp. serovar Kenya str. Sh9 extrachromosomal linear Cluster_147 Spirochaetia_gi_523645358 hallmark 38;6;3;29 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira interrogans str. 2002000631 extrachromosomal linear Cluster_147 Spirochaetia_gi_523645361 hallmark 60;6;9;45 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Twortlikevirus;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira interrogans str. 2002000631 extrachromosomal linear Cluster_146 Spirochaetia_gi_523645780 hallmark 16;4;1;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira interrogans str. 2002000632 extrachromosomal linear Cluster_319 Spirochaetia_gi_523645870-24-39381 hallmark 54;6;5;43 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Twortlikevirus;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira interrogans str. 2002000632 prophage linear Cluster_146 Spirochaetia_gi_523645892-12676-50382 hallmark 53;6;5;42 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Twortlikevirus;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira interrogans str. 2002000632 prophage linear Cluster_146 Spirochaetia_gi_523646099-0-33046 hallmark 45;7;5;33 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira interrogans str. 2002000632 prophage linear Cluster_147 Spirochaetia_gi_523646123 hallmark 16;4;1;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira interrogans str. 2003000735 extrachromosomal linear Cluster_319 Spirochaetia_gi_523646289 hallmark 59;6;9;44 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Twortlikevirus;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira interrogans str. 2003000735 extrachromosomal linear Cluster_146 Spirochaetia_gi_523646440 hallmark 42;7;4;31 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira interrogans str. 2003000735 extrachromosomal linear Cluster_147 Spirochaetia_gi_523646872 hallmark 85;6;19;60 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira sp. P2653 extrachromosomal linear Cluster_108 Spirochaetia_gi_523647283 hallmark 55;12;3;40 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira sp. P2653 extrachromosomal linear Cluster_61 Spirochaetia_gi_523647848 hallmark 32;7;3;22 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira sp. P2653 extrachromosomal linear Cluster_61 Spirochaetia_gi_523648323 hallmark 24;4;4;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira sp. P2653 extrachromosomal linear Cluster_61 Spirochaetia_gi_523649009 hallmark;refseq 98;22;18;58 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira interrogans serovar Valbuzzi str. Duyster extrachromosomal linear Cluster_121 Spirochaetia_gi_523649954 hallmark 49;6;2;41 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira santarosai str. HAI1349 extrachromosomal linear Cluster_213 Spirochaetia_gi_523650070 hallmark 58;6;9;43 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira interrogans str. UT126 extrachromosomal linear Cluster_110 Spirochaetia_gi_537808464 hallmark 51;10;2;39 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira alexanderi serovar Manhao 3 str. L 60 extrachromosomal linear Cluster_61 Spirochaetia_gi_537815031 hallmark 79;12;9;58 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Leptospiraceae;Leptospira Leptospira kmetyi serovar Malaysia str. Bejo-Iso9 extrachromosomal linear Cluster_61 Spirochaetia_gi_544919744-58143-92578 hallmark;refseq 45;16;13;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Spirochaetaceae;Treponema Treponema socranskii subsp. socranskii VPI DR56BR1116 = ATCC 35536 prophage linear Cluster_3 Spirochaetia_gi_545134079 hallmark;refseq 53;20;5;28 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Spirochaetaceae;Treponema Treponema socranskii subsp. socranskii VPI DR56BR1116 = ATCC 35536 extrachromosomal linear Cluster_77 Spirochaetia_gi_545134458-35250-69685 hallmark;refseq 46;16;13;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;Mulikevirus;unknown Bacteria;Spirochaetes;Spirochaetia;Spirochaetales;Spirochaetaceae;Treponema Treponema socranskii subsp. socranskii VPI DR56BR1116 = ATCC 35536 prophage linear Cluster_3 SUP05_AB_750C22AB_904_13 hallmark;refseq 21;8;1;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Oceanospirillales;unknown;SUP05 SUP05_AB_750C22AB_904 extrachromosomal linear Cluster_114 SUP05_AB_750K04AB_904_0 hallmark 117;35;5;77 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;N4likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Oceanospirillales;unknown;SUP05 SUP05_AB_750K04AB_904 extrachromosomal linear Cluster_188 SUP05_AB_751_G10AB_905_6 refseq 32;22;;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Oceanospirillales;unknown;SUP05 SUP05_AB_751_G10AB_905 extrachromosomal linear Cluster_204 SUP05_AB_751_P07AB_905_26 hallmark 18;2;3;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Oceanospirillales;unknown;SUP05 SUP05_AB_751_P07AB_905 extrachromosomal linear unclustered SUP05_AB_754_J03AB_906_13 hallmark;refseq 17;6;;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Oceanospirillales;unknown;SUP05 SUP05_AB_754_J03AB_906 extrachromosomal linear unclustered SUP05_AB_755_D02C10_21 hallmark;refseq 7;6;;1 Viruses;ssDNA viruses;unknown;Microviridae;Chlamydiamicrovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Oceanospirillales;unknown;SUP05 SUP05_AB_755_D02C10 extrachromosomal linear Cluster_140 SUP05_AB_755_M08F06_0 hallmark;refseq 68;24;1;43 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;T4likevirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Oceanospirillales;unknown;SUP05 SUP05_AB_755_M08F06 extrachromosomal linear Cluster_323 Synergistia_gi_282856097-5338-29918 hallmark 33;9;8;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Synergistetes;Synergistia;Synergistales;Synergistaceae;Pyramidobacter Pyramidobacter piscolens W5455 prophage linear Cluster_158 Thermomicrobia_gi_390562069 hallmark;refseq 33;11;1;21 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Chloroflexi;Thermomicrobia;Sphaerobacterales;Sphaerobacteraceae;Nitrolancea Nitrolancea hollandica Lb extrachromosomal linear Cluster_20 Thermoprotei_gi_227826411-1679190-1693805 refseq 29;26;;3 Viruses;dsDNA viruses no RNA stage;unknown;Fuselloviridae;Alphafusellovirus;unknown Archaea;Crenarchaeota;Thermoprotei;Sulfolobales;Sulfolobaceae;Sulfolobus Sulfolobus islandicus M.14.25 prophage linear Cluster_112 Thermoprotei_gi_227829020-118353-133781 refseq 28;24;1;3 Viruses;dsDNA viruses no RNA stage;unknown;Fuselloviridae;Alphafusellovirus;unknown Archaea;Crenarchaeota;Thermoprotei;Sulfolobales;Sulfolobaceae;Sulfolobus Sulfolobus islandicus L.S.2.15 prophage linear Cluster_112 Thermoprotei_gi_229577818-1585865-1598038 refseq 23;18;2;3 Viruses;dsDNA viruses no RNA stage;unknown;Fuselloviridae;Alphafusellovirus;unknown Archaea;Crenarchaeota;Thermoprotei;Sulfolobales;Sulfolobaceae;Sulfolobus Sulfolobus islandicus Y.G.57.14 prophage linear Cluster_112 Thermoprotei_gi_254499601 refseq 10;6;;4 Viruses;dsDNA viruses no RNA stage;unknown;Fuselloviridae;Alphafusellovirus;unknown Archaea;Crenarchaeota;Thermoprotei;Sulfolobales;Sulfolobaceae;Sulfolobus Sulfolobus solfataricus 98/2 extrachromosomal linear Cluster_112 Thermoprotei_gi_254499611 refseq 8;8;; Viruses;dsDNA viruses no RNA stage;unknown;Fuselloviridae;Alphafusellovirus;unknown Archaea;Crenarchaeota;Thermoprotei;Sulfolobales;Sulfolobaceae;Sulfolobus Sulfolobus solfataricus 98/2 extrachromosomal linear Cluster_112 Thermoprotei_gi_374633285-291125-308527 refseq 30;19;1;10 Viruses;dsDNA viruses no RNA stage;unknown;Fuselloviridae;Alphafusellovirus;unknown Archaea;Crenarchaeota;Thermoprotei;Sulfolobales;Sulfolobaceae;Metallosphaera Metallosphaera yellowstonensis MK1 prophage linear Cluster_112 Thermoprotei_gi_483377368-453883-461126 noncaudo 10;5;;5 Viruses;dsDNA viruses no RNA stage;unknown;Fuselloviridae;Alphafusellovirus;unknown Archaea;Crenarchaeota;Thermoprotei;Sulfolobales;Sulfolobaceae;Sulfolobus Sulfolobus islandicus M.16.12 prophage linear Cluster_550 Thermoprotei_gi_483377487-338515-381935 refseq 60;21;16;23 Viruses;dsDNA viruses no RNA stage;unknown;Fuselloviridae;Alphafusellovirus;unknown Archaea;Crenarchaeota;Thermoprotei;Sulfolobales;Sulfolobaceae;Sulfolobus Sulfolobus islandicus M.16.12 prophage linear Cluster_505 Thermoprotei_gi_483378735-452740-459981 noncaudo;vdb 10;5;;5 Viruses;dsDNA viruses no RNA stage;unknown;Fuselloviridae;Alphafusellovirus;unknown Archaea;Crenarchaeota;Thermoprotei;Sulfolobales;Sulfolobaceae;Sulfolobus Sulfolobus islandicus M.16.22 prophage linear Cluster_550 Thermoprotei_gi_483378806-339141-382559 refseq 61;21;17;23 Viruses;dsDNA viruses no RNA stage;unknown;Fuselloviridae;Alphafusellovirus;unknown Archaea;Crenarchaeota;Thermoprotei;Sulfolobales;Sulfolobaceae;Sulfolobus Sulfolobus islandicus M.16.22 prophage linear Cluster_505 Thermoprotei_gi_483380609-2368826-2414990 noncaudo 63;11;9;43 Viruses;dsDNA viruses no RNA stage;unknown;Fuselloviridae;Alphafusellovirus;unknown Archaea;Crenarchaeota;Thermoprotei;Sulfolobales;Sulfolobaceae;Sulfolobus Sulfolobus islandicus M.16.40 prophage linear Cluster_112 unknown_gi_253682852 refseq 16;8;4;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown unknown;unknown;unknown;unknown;unknown;unknown Clostridium phage D-1873 extrachromosomal linear Cluster_89 unknown_gi_253682872 refseq 14;13;1; Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown unknown;unknown;unknown;unknown;unknown;unknown Clostridium phage D-1873 extrachromosomal linear Cluster_89 unknown_gi_253682895 hallmark;refseq 82;57;6;19 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown unknown;unknown;unknown;unknown;unknown;unknown Clostridium phage D-1873 extrachromosomal linear Cluster_89 unknown_gi_253682974 refseq 17;15;;2 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown unknown;unknown;unknown;unknown;unknown;unknown Clostridium phage D-1873 extrachromosomal linear Cluster_89 unknown_gi_484106635 hallmark 24;5;1;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Bacteroidetes;unknown;unknown;unknown;unknown Cytophagales str. B6 extrachromosomal linear Cluster_599 unknown_gi_484201157 hallmark 56;7;;49 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Chloroflexi;unknown;unknown;unknown;unknown SAR202 cluster bacterium SCGC AAA240-N13 extrachromosomal linear unclustered unknown_gi_484209866 noncaudo 7;2;2;3 Viruses;dsDNA viruses no RNA stage;unknown;Bicaudaviridae;unknown;unknown Archaea;Crenarchaeota;unknown;unknown;unknown;unknown crenarchaeote SCGC AAA261-F05 extrachromosomal linear unclustered unknown_gi_484235599-6649-21987 noncaudo 16;4;7;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Archaea;Crenarchaeota;unknown;unknown;unknown;unknown Crenarchaeota archaeon SCGC AAA471-B05 prophage linear Cluster_589 unknown_gi_486908286 hallmark 39;10;;29 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Verrucomicrobia;unknown;unknown;unknown;unknown Verrucomicrobia bacterium SCGC AAA164-I21 extrachromosomal linear Cluster_608 unknown_gi_486908921 refseq;vdb 22;2;;20 Viruses;dsDNA viruses no RNA stage;unknown;unknown;unknown;unknown Bacteria;Verrucomicrobia;unknown;unknown;unknown;unknown Verrucomicrobia bacterium SCGC AAA164-I21 extrachromosomal linear unclustered unknown_gi_487398564 refseq 23;12;1;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Verrucomicrobia;unknown;unknown;unknown;unknown Verrucomicrobia bacterium SCGC AAA164-M04 extrachromosomal linear unclustered unknown_gi_487398648 hallmark 41;11;6;24 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Verrucomicrobia;unknown;unknown;unknown;unknown Verrucomicrobia bacterium SCGC AAA164-M04 extrachromosomal linear Cluster_126 unknown_gi_487398751 refseq 44;16;;28 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Verrucomicrobia;unknown;unknown;unknown;unknown Verrucomicrobia bacterium SCGC AAA164-M04 extrachromosomal linear Cluster_58 unknown_gi_487398877 refseq;vdb 28;8;2;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;T4likevirus;unknown Bacteria;Verrucomicrobia;unknown;unknown;unknown;unknown Verrucomicrobia bacterium SCGC AAA164-M04 extrachromosomal linear unclustered unknown_gi_506495612-27125-42463 noncaudo 16;4;7;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Archaea;Crenarchaeota;unknown;unknown;unknown;unknown Crenarchaeota archaeon SCGC AAA471-O08 prophage linear Cluster_589 unknown_gi_511637850 hallmark 19;3;1;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Omnitrophica;unknown;unknown;unknown;unknown Omnitrophica bacterium SCGC AAA257-O07 extrachromosomal linear Cluster_461 unknown_gi_511637864 hallmark 11;3;1;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Omnitrophica;unknown;unknown;unknown;unknown Omnitrophica bacterium SCGC AAA257-O07 extrachromosomal linear Cluster_461 unknown_gi_543937801 noncaudo 31;3;13;15 Viruses;dsDNA viruses no RNA stage;unclassified;unclassified;unclassified;unknown Bacteria;unknown;unknown;Haloplasmatales;Haloplasmataceae;Haloplasma Haloplasma contractile SSD-17B extrachromosomal linear unclustered unknown_gi_546400467 hallmark 18;3;3;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;unknown;unknown;unknown;unknown Firmicutes bacterium CAG:555 extrachromosomal linear Cluster_368 unknown_gi_546714669 hallmark;refseq 53;19;7;27 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;unknown;unknown;unknown;unknown Firmicutes bacterium CAG:110 extrachromosomal linear Cluster_161 unknown_gi_546720379 refseq;vdb 13;4;6;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Firmicutes;unknown;unknown;unknown;unknown Firmicutes bacterium CAG:110 extrachromosomal linear Cluster_42 unknown_gi_547178034 hallmark 28;3;7;18 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;unknown;unknown;unknown;unknown Firmicutes bacterium CAG:114 extrachromosomal linear Cluster_368 unknown_gi_547191751 hallmark 89;23;16;50 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;unknown;unknown;unknown;unknown Firmicutes bacterium CAG:124 extrachromosomal linear Cluster_48 unknown_gi_547274508 hallmark;refseq 28;12;3;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unknown;unknown Bacteria;Firmicutes;unknown;unknown;unknown;unknown Firmicutes bacterium CAG:646 extrachromosomal linear Cluster_243 unknown_gi_547275463 hallmark;refseq 31;13;3;15 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;unknown;unknown;unknown;unknown Firmicutes bacterium CAG:646 extrachromosomal linear Cluster_106 unknown_gi_547732420-72-29629 hallmark 39;6;1;32 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unknown;unknown Bacteria;Firmicutes;unknown;unknown;unknown;unknown Firmicutes bacterium CAG:238 prophage linear Cluster_591 unknown_gi_547742710-205798-240777 hallmark;refseq;vdb 56;17;9;30 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;unknown;unknown;unknown;unknown Firmicutes bacterium CAG:145 prophage linear Cluster_31 unknown_gi_547778826 refseq;vdb 28;9;8;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;unknown;unknown;unknown;unknown Firmicutes bacterium CAG:240 extrachromosomal linear Cluster_20 unknown_gi_547779779 hallmark;refseq;vdb 33;14;13;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;unknown;unknown;unknown;unknown Firmicutes bacterium CAG:240 extrachromosomal linear Cluster_42 unknown_gi_547812173 refseq;vdb 21;6;10;5 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Firmicutes;unknown;unknown;unknown;unknown Firmicutes bacterium CAG:170 extrachromosomal linear Cluster_350 unknown_gi_547812444 hallmark 80;21;13;46 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;unknown;unknown;unknown;unknown Firmicutes bacterium CAG:170 extrachromosomal linear Cluster_48 unknown_gi_547820232 hallmark 22;9;6;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;unknown;unknown;unknown;unknown Firmicutes bacterium CAG:41 extrachromosomal linear Cluster_512 unknown_gi_547821111 hallmark;refseq;vdb 14;6;5;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;unknown;unknown;unknown;unknown Firmicutes bacterium CAG:41 extrachromosomal linear Cluster_512 unknown_gi_547821157 hallmark;refseq 26;14;3;9 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Firmicutes;unknown;unknown;unknown;unknown Firmicutes bacterium CAG:41 extrachromosomal linear Cluster_251 unknown_gi_547821862 hallmark 37;12;9;16 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;unknown;unknown;unknown;unknown Firmicutes bacterium CAG:41 extrachromosomal linear Cluster_20 unknown_gi_547846574 refseq;vdb 89;15;6;68 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;unknown;unknown;unknown;unknown Firmicutes bacterium CAG:466 extrachromosomal linear Cluster_89 unknown_gi_547847145-4476-19350 hallmark;refseq 22;12;3;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;unknown;unknown;unknown;unknown Firmicutes bacterium CAG:466 prophage linear Cluster_480 unknown_gi_547858986 hallmark;refseq 41;14;5;22 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Firmicutes;unknown;unknown;unknown;unknown Firmicutes bacterium CAG:449 extrachromosomal linear Cluster_42 unknown_gi_547862516 hallmark 57;14;5;38 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;unknown;unknown;unknown;unknown Firmicutes bacterium CAG:424 extrachromosomal linear Cluster_227 unknown_gi_547933689-128-14872 refseq;vdb 12;7;1;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Phic3unalikevirus;unknown Bacteria;Firmicutes;unknown;unknown;unknown;unknown Firmicutes bacterium CAG:94 prophage linear Cluster_20 unknown_gi_547973622 hallmark 84;20;2;62 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;unknown;unknown;unknown;unknown Firmicutes bacterium CAG:882 extrachromosomal linear Cluster_255 unknown_gi_548041010 hallmark;refseq 71;18;19;34 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;unknown;unknown;unknown;unknown Firmicutes bacterium CAG:270 extrachromosomal linear Cluster_490 unknown_gi_548308941 refseq;vdb 19;7;5;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;unknown;unknown;unknown;unknown Firmicutes bacterium CAG:95 extrachromosomal linear Cluster_17 unknown_gi_548309918 hallmark;refseq 32;12;3;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Firmicutes;unknown;unknown;unknown;unknown Firmicutes bacterium CAG:95 extrachromosomal linear Cluster_459 unknown_gi_551155515 hallmark 50;4;2;44 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unknown;unknown Bacteria;Poribacteria;unknown;unknown;unknown;unknown Poribacteria bacterium WGA-3G extrachromosomal linear unclustered unknown_gi_551220586 hallmark;vdb 18;4;2;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Chloroflexi;unknown;unknown;unknown;unknown Chloroflexi bacterium oral taxon 439 isolate Chl1-2 extrachromosomal linear Cluster_601 unknown_gi_551221795 hallmark;vdb 18;4;2;12 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Chloroflexi;unknown;unknown;unknown;unknown Chloroflexi bacterium oral taxon 439 isolate Chl1 extrachromosomal linear Cluster_601 unknown_gi_557506529-95083-110088 hallmark;refseq;vdb 22;13;3;6 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;unknown;unknown;unknown;unknown Firmicutes bacterium CAG:102 prophage linear Cluster_15 unknown_gi_557506924-0-37126 hallmark 50;6;6;38 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Firmicutes;unknown;unknown;unknown;unknown Firmicutes bacterium CAG:103 prophage linear Cluster_591 Zetaproteobacteria_gi_483101500 hallmark;refseq 69;26;17;26 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Zetaproteobacteria;unknown;unknown;unknown zeta proteobacterium SCGC AB-137-C09 extrachromosomal linear Cluster_0 Zetaproteobacteria_gi_483166662 hallmark 28;7;4;17 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Zetaproteobacteria;unknown;unknown;unknown zeta proteobacterium SCGC AB-133-C04 extrachromosomal linear Cluster_359 Zetaproteobacteria_gi_483190635 hallmark 25;8;4;13 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Proteobacteria;Zetaproteobacteria;unknown;unknown;unknown zeta proteobacterium SCGC AB-137-I08 extrachromosomal linear Cluster_359 Actinobacteria_gi_145297095 hallmark;refseq 73;24;3;46 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Actinobacteria;Actinobacteria;Actinomycetales;Corynebacteriaceae;Corynebacterium Corynebacterium glutamicum R extrachromosomal linear Cluster_445 Bacilli_gi_434380362 hallmark;refseq 24;24;; Viruses;dsDNA viruses no RNA stage;unknown;Tectiviridae;Tectivirus;unknown Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus thuringiensis HD-789 extrachromosomal linear Cluster_125 Bacilli_gi_452202137 hallmark 47;15;9;23 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacillus thuringiensis serovar thuringiensis str. IS5056 extrachromosomal linear Cluster_150 Betaproteobacteria_gi_10954629 hallmark;refseq 10;9;;1 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Ralstonia Ralstonia solanacearum extrachromosomal linear Cluster_229 Clostridia_gi_219684028 hallmark;refseq 78;29;12;37 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unknown Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium kluyveri NBRC 12016 extrachromosomal linear Cluster_530 Clostridia_gi_451822614 hallmark 105;28;15;62 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;unclassified;unclassified Bacteria;Firmicutes;Clostridia;Clostridiales;Clostridiaceae;Clostridium Clostridium saccharoperbutylacetonicum N1-4(HMT) extrachromosomal linear Cluster_393 Cyanobacteria_gi_307591243 hallmark 12;1;1;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;T4likevirus;unknown Bacteria;Cyanobacteria;unknown;Chroococcales;unknown;Cyanothece Cyanothece sp. PCC 7822 extrachromosomal linear Cluster_558 Cyanobacteria_gi_436736068 hallmark;vdb 12;;1;11 Viruses;dsDNA viruses no RNA stage;Caudovirales;Siphoviridae;Lambdalikevirus;unknown Bacteria;Cyanobacteria;unknown;Pleurocapsales;unknown;Stanieria Stanieria cyanosphaera PCC 7437 extrachromosomal linear Cluster_558 Gammaproteobacteria_gi_161789109 hallmark;refseq 99;41;8;50 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio sp. 0908 extrachromosomal linear Cluster_16 Gammaproteobacteria_gi_190570458 noncaudo;vdb 5;;2;3 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio Vibrio cholerae extrachromosomal linear Cluster_231 Gammaproteobacteria_gi_407689711 hallmark;refseq 52;22;3;27 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unclassified Bacteria;Proteobacteria;Gammaproteobacteria;Alteromonadales;Alteromonadaceae;Alteromonas Alteromonas macleodii str. 'Balearic Sea AD45' extrachromosomal circular Cluster_16 Gammaproteobacteria_gi_45478588-62-83808 hallmark;refseq 90;76;11;3 Viruses;dsDNA viruses no RNA stage;Caudovirales;unclassified;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Yersinia Yersinia pestis biovar Microtus str. 91001 prophage linear Cluster_9 Gammaproteobacteria_gi_507121143 noncaudo 13;3;1;9 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Providencia Providencia sneebia DSM 19967 extrachromosomal linear Cluster_36 Gammaproteobacteria_gi_544848166 hallmark;refseq 65;18;12;35 Viruses;dsDNA viruses no RNA stage;Caudovirales;Podoviridae;unclassified;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa VRFPA03 extrachromosomal linear Cluster_233 Gammaproteobacteria_gi_544848404 refseq 20;13;3;4 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa VRFPA03 extrachromosomal linear Cluster_120 Gammaproteobacteria_gi_544848875 noncaudo 18;3;3;12 Viruses;ssDNA viruses;unknown;Inoviridae;Inovirus;unknown Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas Pseudomonas aeruginosa VRFPA03 extrachromosomal linear Cluster_163 Halobacteria_gi_161561737 refseq 20;13;;7 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unknown;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Halobacterium Halobacterium salinarum extrachromosomal linear Cluster_284 Halobacteria_gi_385805044 noncaudo 6;2;;4 Viruses;ssDNA viruses;unknown;unknown;unknown;unknown Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halobacteriaceae;Haloquadratum Haloquadratum walsbyi C23 extrachromosomal linear unclustered Thermococci_gi_295698802 noncaudo 11;3;1;7 Viruses;dsDNA viruses no RNA stage;unknown;unknown;unknown;unknown Archaea;Euryarchaeota;Thermococci;Thermococcales;Thermococcaceae;Thermococcus Thermococcus nautili extrachromosomal linear unclustered Thermococci_gi_295698815 noncaudo 33;4;4;25 Viruses;unclassified;unknown;unclassified;unclassified;unknown Archaea;Euryarchaeota;Thermococci;Thermococcales;Thermococcaceae;Thermococcus Thermococcus sp. 26/2 extrachromosomal linear unclustered unknown_gi_294508902 hallmark 14;3;1;10 Viruses;dsDNA viruses no RNA stage;Caudovirales;Myoviridae;unclassified;unknown Bacteria;Bacteroidetes;unknown;Bacteroidetes Order II. Incertae sedis;Rhodothermaceae;Salinibacter Salinibacter ruber M8 extrachromosomal linear unclustered