Retrieve the results by the job ID in Results page: PHIS_2020100611012107
total 17 bacterial sequence(s) are input, remove 2 bacterial sequence(s) (length < 1000bp) and 15 bacterial sequence(s) are retained to execute PHISDector for predition of hosts.
Contig_ID | Contig_Def | Genome_Size(bp) | Predicted_Infecting_Phage_Number |
---|---|---|---|
JH556650 | JH556650 Listeria innocua ATCC 33091 genomic scaffold Scfld102 | 469210 | 3 |
JH556635 | JH556635 Listeria innocua ATCC 33091 genomic scaffold Scfld1 | 80501 | 0 |
JH556639 | JH556639 Listeria innocua ATCC 33091 genomic scaffold Scfld10 | 1518 | 0 |
JH556634 | JH556634 Listeria innocua ATCC 33091 genomic scaffold Scfld0 | 103437 | 0 |
JH556648 | JH556648 Listeria innocua ATCC 33091 genomic scaffold Scfld77 | 128196 | 0 |
JH556645 | JH556645 Listeria innocua ATCC 33091 genomic scaffold Scfld30 | 38014 | 0 |
JH556647 | JH556647 Listeria innocua ATCC 33091 genomic scaffold Scfld42 | 1455432 | 5 |
JH556637 | JH556637 Listeria innocua ATCC 33091 genomic scaffold Scfld7 | 15412 | 0 |
JH556643 | JH556643 Listeria innocua ATCC 33091 genomic scaffold Scfld25 | 8477 | 0 |
JH556646 | JH556646 Listeria innocua ATCC 33091 genomic scaffold Scfld31 | 561500 | 0 |
JH556640 | JH556640 Listeria innocua ATCC 33091 genomic scaffold Scfld11 | 2670 | 0 |
JH556641 | JH556641 Listeria innocua ATCC 33091 genomic scaffold Scfld12 | 3297 | 0 |
JH556636 | JH556636 Listeria innocua ATCC 33091 genomic scaffold Scfld6 | 1682 | 0 |
JH556638 | JH556638 Listeria innocua ATCC 33091 genomic scaffold Scfld9 | 4410 | 0 |
JH556649 | JH556649 Listeria innocua ATCC 33091 genomic scaffold Scfld79 | 16961 | 0 |
Annotation:
1. If bacterial contig size < 1000bp, PHISDetector will not consider this contig.
2. If the input file is multi-fasta format, PHISDetector will consider no more than 50 contigs(length>=1000bp)
Lists of Predicted infecting phage keywords
Strong: the bacterium-phage pair passes Criterion 1
Weak: the bacterium-phage pair passes Criterion 2 but doesn't pass Criterion 1
Not validated
Phage_ID | Phage_Def | Score | CRISPR | Prophage | Genetic homology | Sequence composition | PPI | PHIS Details |
---|---|---|---|---|---|---|---|---|
MH341453 | Listeria phage PSU-VKH-LP041 | 1.0 | Strong | No | No | Yes | No | |
DQ003640 | Listeria phage B054 | 1.0 | Strong | No | No | Yes | No | |
DQ003642 | Listeria phage A006 | 1.0 | Strong | No | No | Yes | No | |
MH341451 | Listeria phage PSU-VKH-LP019 | 1.0 | Strong | No | No | Yes | No | |
KP399677 | Listeria phage vB_LmoS_188 | 1.0 | Strong | No | No | Yes | No |