CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP001685	Leptotrichia buccalis DSM 1135, complete genome	7 crisprs	PD-DExK,cas3,cas14j,DEDDh,cas2,cas1,cas4,cas5,cas7,cas8b2,cas6,cas10,csx10gr5,csm3gr7,csx1,csx20,WYL,cas13a,DinG,csa3	1	20	2	5

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP001685_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP001685_1

502904-503089

TypeV

I-B

Consensus_repeat	Method
GTTTCAATCCTTGTTTTAATGGATTCACTATTCTTAC	PILER-CR
CAATCCTTGTTTTAATGGATTCACTATTCTTAC	CRISPRCasFinder

2 spacers

cas14j

The CRISPR arrays of CP001685_1

>merge|CP001685|1|502904-503089|PILER-CR,CRISPRCasFinder
GTTCCAATCCTTGTTTTAATGGATTCACTATTCTTACAATATAAAGAAGAAATAAAAAGGGCAATCAGGACCATGTTTCAATCCTTATTTTAATGGATTCACTATTCTTACGAGCTTGGATTTGCTTTAAAAGAAATTCAAGAAATTCAGTCTCAATCCTTGTTTTAATGGATTCACTATTCTTAC

>CP001685|1|1|502904-503089|PILER-CR
GTTCCAATCCTTGTTTTAATGGATTCACTATTCTTAC	AATATAAAGAAGAAATAAAAAGGGCAATCAGGACCAT
GTTTCAATCCTTATTTTAATGGATTCACTATTCTTAC	GAGCTTGGATTTGCTTTAAAAGAAATTCAAGAAATTCA
GTCTCAATCCTTGTTTTAATGGATTCACTATTCTTAC

>CP001685|1|1|502908-503089|CRISPRCasFinder
CAATCCTTGTTTTAATGGATTCACTATTCTTAC	AATATAAAGAAGAAATAAAAAGGGCAATCAGGACCATGTTT
CAATCCTTATTTTAATGGATTCACTATTCTTAC	GAGCTTGGATTTGCTTTAAAAGAAATTCAAGAAATTCAGTCT
CAATCCTTGTTTTAATGGATTCACTATTCTTAC

Protein	Signature genes	Signature genes Name	Protein_function
CP001685.1\|ACV38386.1\|507727_507991_-\|integral-membrane-protein	unknown	unknown	gnl\|CDD\|367325
CP001685.1\|ACV38384.1\|503917_505906_-\|small-GTP-binding-protein	unknown	unknown	gnl\|CDD\|237186
CP001685.1\|ACV38391.1\|513091_514189_-\|transposase,-IS605-OrfB-family	cas14j	-	gnl\|CDD\|223747
CP001685.1\|ACV38376.1\|497535_498090_+\|methyltransferase	unknown	unknown	gnl\|CDD\|367574
CP001685.1\|ACV38387.1\|508124_509642_+\|glycerol-kinase	unknown	unknown	gnl\|CDD\|234594
CP001685.1\|ACV38378.1\|498458_499349_+\|Polyprenyl-synthetase	unknown	unknown	gnl\|CDD\|223220
CP001685.1\|ACV38390.1\|512418_512886_-\|hypothetical-protein	unknown	unknown	unknown
CP001685.1\|ACV38383.1\|502236_502827_-\|cobalbumin-biosynthesis-protein	unknown	unknown	gnl\|CDD\|235612
CP001685.1\|ACV38379.1\|499445_500156_+\|hypothetical-protein	unknown	unknown	unknown
CP001685.1\|ACV38377.1\|498118_498340_+\|Exonuclease-VII-small-subunit	unknown	unknown	gnl\|CDD\|179195
CP001685.1\|ACV38380.1\|500179_500959_+\|protein-of-unknown-function-DUF152	unknown	unknown	gnl\|CDD\|319354
CP001685.1\|ACV38388.1\|509721_511404_-\|Chloride-channel-core	unknown	unknown	gnl\|CDD\|238504
CP001685.1\|ACV38374.1\|492959_496517_+\|DNA-polymerase-III,-alpha-subunit	unknown	unknown	gnl\|CDD\|235554
CP001685.1\|ACV38381.1\|500991_501552_+\|hypothetical-protein	unknown	unknown	unknown
CP001685.1\|ACV38393.1\|514860_515700_+\|ATP-NAD/AcoX-kinase	unknown	unknown	gnl\|CDD\|223139
CP001685.1\|ACV38375.1\|496714_497482_+\|hypothetical-protein	unknown	unknown	unknown
CP001685.1\|ACV38389.1\|511428_512397_-\|ApbE-family-lipoprotein	unknown	unknown	gnl\|CDD\|224394
CP001685.1\|ACV38385.1\|506269_507454_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|371915
CP001685.1\|ACV38382.1\|501620_502199_-\|5-formyltetrahydrofolate-cyclo-ligase	unknown	unknown	gnl\|CDD\|223290
CP001685.1\|ACV38392.1\|514193_514592_-\|transposase-IS200-family-protein	unknown	unknown	gnl\|CDD\|376616

Protein	Function_ID	Function_description	E-value
CP001685.1\|ACV38386.1\|507727_507991_-\|integral-membrane-protein	gnl\|CDD\|367325	pfam03083, MtN3_slv, Sugar efflux transporter for intercellular exchange. This family includes proteins such as drosophila saliva, MtN3 involved in root nodule development and a protein involved in activation and expression of recombination activation genes (RAGs). Although the molecular function of these proteins is unknown, they are almost certainly transmembrane proteins. This family contains a region of two transmembrane helices that is found in two copies in most members of the family. This family also contains specific sugar efflux transporters that are essential for the maintenance of animal blood glucose levels, plant nectar production, and plant seed and pollen development. In many organisims it meditaes gluose transport; in Arabidopsis it is necessary for pollen viability; and two of the rice homologs are specifically exploited by bacterial pathogens for virulence by means of direct binding of a bacterial effector to the SWEET promoter.	0.000742054
CP001685.1\|ACV38384.1\|503917_505906_-\|small-GTP-binding-protein	gnl\|CDD\|237186	PRK12740, PRK12740, elongation factor G-like protein EF-G2.	0
CP001685.1\|ACV38391.1\|513091_514189_-\|transposase,-IS605-OrfB-family	gnl\|CDD\|223747	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	1.50391e-48
CP001685.1\|ACV38376.1\|497535_498090_+\|methyltransferase	gnl\|CDD\|367574	pfam03602, Cons_hypoth95, Conserved hypothetical protein 95.	1.01027e-65
CP001685.1\|ACV38387.1\|508124_509642_+\|glycerol-kinase	gnl\|CDD\|234594	PRK00047, glpK, glycerol kinase GlpK.	0
CP001685.1\|ACV38378.1\|498458_499349_+\|Polyprenyl-synthetase	gnl\|CDD\|223220	COG0142, IspA, Geranylgeranyl pyrophosphate synthase [Coenzyme metabolism].	1.43233e-79
CP001685.1\|ACV38385.1\|506269_507454_+\|hypothetical-protein	gnl\|CDD\|371915	pfam12138, Spherulin4, Spherulation-specific family 4. This protein is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 250 and 398 amino acids in length. There is a conserved NPG sequence motif and there are two completely conserved G residues that may be functionally important. Starvation will often induce spherulation - the production of spores - and this process may involve DNA-methylation. Changes in the methylation of spherulin4 are associated with the formation of spherules, but these changes are probably transient. Methylation of the gene accompanies its transcriptional activation, and spherulin4 mRNA is only detectable in late spherulating cultures and mature spherules. It is a spherulation-specific protein.	1.24089e-19
CP001685.1\|ACV38383.1\|502236_502827_-\|cobalbumin-biosynthesis-protein	gnl\|CDD\|235612	PRK05800, cobU, adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase; Validated.	6.79151e-73
CP001685.1\|ACV38380.1\|500179_500959_+\|protein-of-unknown-function-DUF152	gnl\|CDD\|319354	cd16833, YfiH, protein of unknown function YfiH. This subfamily contains YfiH, a protein of unknown function from Shigella flexneri, E. coli, and many similar proteins which collectively are often called DUF152. The structure of YfiH reveals a distant homology to Rho-activating toxins cytotoxic necrotizing factor 1 (CNF1) as well as chemotaxis protein CheD that stimulates methylation of methyl-accepting chemotaxis proteins (MCPs), all having an invariant Cys-His pair forming a catalytic dyad, and is required by the CNF-1 toxins for deamidation activity.	3.28821e-59
CP001685.1\|ACV38388.1\|509721_511404_-\|Chloride-channel-core	gnl\|CDD\|238504	cd01031, EriC, ClC chloride channel EriC. This domain is found in the EriC chloride transporters that mediate the extreme acid resistance response in eubacteria and archaea. This response allows bacteria to survive in the acidic environments by decarboxylation-linked proton utilization. As shown for Escherichia coli EriC, these channels can counterbalance the electric current produced by the outwardly directed virtual proton pump linked to amino acid decarboxylation. The EriC proteins belong to the ClC superfamily of chloride ion channels, which share a unique double-barreled architecture and voltage-dependent gating mechanism. The voltage-dependent gating is conferred by the permeating anion itself, acting as the gating charge. In Escherichia coli EriC, a glutamate residue that protrudes into the pore is thought to participate in gating by binding to a Cl- ion site within the selectivity filter.	7.67203e-134
CP001685.1\|ACV38374.1\|492959_496517_+\|DNA-polymerase-III,-alpha-subunit	gnl\|CDD\|235554	PRK05673, dnaE, DNA polymerase III subunit alpha; Validated.	0
CP001685.1\|ACV38389.1\|511428_512397_-\|ApbE-family-lipoprotein	gnl\|CDD\|224394	COG1477, ApbE, Membrane-associated lipoprotein involved in thiamine biosynthesis [Coenzyme metabolism].	3.78933e-48
CP001685.1\|ACV38393.1\|514860_515700_+\|ATP-NAD/AcoX-kinase	gnl\|CDD\|223139	COG0061, nadF, NAD kinase [Coenzyme metabolism].	1.39885e-75
CP001685.1\|ACV38392.1\|514193_514592_-\|transposase-IS200-family-protein	gnl\|CDD\|376616	pfam01797, Y1_Tnp, Transposase IS200 like. Transposases are needed for efficient transposition of the insertion sequence or transposon DNA. This family includes transposases for IS200 from E. coli.	1.85883e-47
CP001685.1\|ACV38377.1\|498118_498340_+\|Exonuclease-VII-small-subunit	gnl\|CDD\|179195	PRK00977, PRK00977, exodeoxyribonuclease VII small subunit; Provisional.	1.87097e-10
CP001685.1\|ACV38382.1\|501620_502199_-\|5-formyltetrahydrofolate-cyclo-ligase	gnl\|CDD\|223290	COG0212, COG0212, 5-formyltetrahydrofolate cyclo-ligase [Coenzyme metabolism].	7.36654e-42

>CP001685.1|ACV38383.1|502236_502827_-|cobalbumin-biosynthesis-protein
MALIFVTGGAKSGKSKFAEELILSLNNGKQENVYLATSLVFDEEMKEKVRLHKERRKNNWGTVETYKNFENSLNEYFPKTKNGIKNNMLVDCLTTMITNIIFEEKDVDWDNFDKKSYVKIVEKLDKNVENTVNELLNITNQFENTIIVSNELGLGLVPSYPLGRYFREIAGKMNQAVAKRADEVYFVVSGIPMKIK
>CP001685.1|ACV38382.1|501620_502199_-|5-formyltetrahydrofolate-cyclo-ligase
MKNEKLNLQLEKDKIRQEILKKRNNLSTEEVEKKSDLIIQNLEKFIKNAENIMIFMDMKNEVRITKLMKLYPEKSFFIPKITDSKNREMKINKYNENELVLHKFGYYESSSSDFYNENILDIVIVPAVVFDFEKNRIGFGGGYYDTFLKKVREKNKKVLFIGICYDFQIVDEVPTESHDMILNFIVSENKVI
>CP001685.1|ACV38381.1|500991_501552_+|hypothetical-protein
MKKILTLAFLVIGVTTFSASCDWFKENTEYADKMVELVKKERLTNKVYCDTDQKKMVYETVDNDTNEKYIEIGLSYNKNKKNSFTYEDILNSFVEFEKDVDKLYPWVNLTKLEYQNAPRYYNYRMYVYNPETQNEYMAFLVTYDTSNGTWNKYYSNEFWNGENENEKEIINVIKETGLKETDDIIY
>CP001685.1|ACV38380.1|500179_500959_+|protein-of-unknown-function-DUF152
MFIENKSYYYIEEFEKYGITAVYTKKIAGNMSDYCPIENQEEGIQKKNREKLLEDLNLTDKQEVMAFQTHSNNVKTIDEDTTKYYYEKEEDIDGFLTKRKDIAIFTFYADCLPIFVYDKENQVIGVWHSGWPGTFKEIMKSGLLEMKKNYGTKIENVIMALGIGIGQKDYEVGNEFYDKFMEKFGKSDGKIVEESFWFNEETKKYHFDNTKFNELMALKFGIKKENLIIANESTFNEKFHSYRRDGKNAGRATAMISFK
>CP001685.1|ACV38379.1|499445_500156_+|hypothetical-protein
MKIKKLLMMVLVLLSVQMCGPEPKLDYNVTKSESYKISEKKMKKNSLEVKKGFEADNDKFRNKAKEVTKKFIEDMMAKEFQNKNETFATQAMKQMVVNMIEKGIEYQKSKIEEIRFFNDEEVQITQKVKVFDNSKGNIAKLQNEYELLKLVAQKLQYKDIQDMSSQMEKMDKKEAFSKFMNGISGVIEDEFKKEENYTEMTTTVNMNKVNNTWHIKNLDEQIKAIEMIFSNLSNSM
>CP001685.1|ACV38378.1|498458_499349_+|Polyprenyl-synthetase
MLREYLEDKKKIVEGNLKELLGNYENKYPEKLSEAMEYAVMNGGKRIRPILMYMICDLFEKNNCKSYDKIKEIAAALEFIHCYSLVHDDLPAMDNDDYRRGKLTVHKKYNEAIGVLVGDVLLTEAFGIIANSKSLGDKNKIEIISKLSEYAGFFGMVGGQFVDMESENKKVEIDTLKYIHAHKTGKLLTAAIELPMIALDIESEKREKMVEYSKLLGIAFQIKDDILDIEGNFEEIGKKSNDAQNEKTTYPSIFGLEKSKKLLQEYLEKAKKIIENEFEGNQLFLELTDYFGNRKK
>CP001685.1|ACV38377.1|498118_498340_+|Exonuclease-VII-small-subunit
MAVKKQSYEENIAQIDEILEKLESEELSLDDSISEYEKAIKLIKDSEKLLESGEGKVMKVLEKNGKLEMEKFE
>CP001685.1|ACV38376.1|497535_498090_+|methyltransferase
MRIVAGVLKNRRIKSREGRETRPTLERIKEAIFSIIGEKVADAKFLDLYSGTGNVSFEALSRGAKRAIMIEEDKEALRIIIENVNHLGIEEKCRAYKNDVSRAIEILARKNEIFDIIFLDPPYKENISTKTIEKISEENLLERDGIIISEHSTYEKMADKIGNFVKYDERDYNKKVVSFYRFEN
>CP001685.1|ACV38375.1|496714_497482_+|hypothetical-protein
MNFFAKKLKNFFSVIFVIAIFITFTVLTFSENSEFLAIGNLKIVRQEPLVIKREDLNITIEKNRTIKVNSVYTFENIGNYNVKSTFMFWLDTNVEKTDKKDFSNKNTNNRGKFVKNIKFLTDYKKAQSLRAVINFDESIYENQVTDNIQREWFAISKVIPSMEEGKVAVYYDLINTKFSRNKDFVYSFDLVENFFNKNKAEVLYVNIYNKSDLKIKNIDFKGYEFKNISKNNKKEHYQLLEGGVNLDGKLVIKFE
>CP001685.1|ACV38374.1|492959_496517_+|DNA-polymerase-III,-alpha-subunit
MENKFVHLKLHTEYSLLEGVGKIDEYVEKAKKTGVKALAITDTSMFGAIEFFKKCKNAGIKPIIGLEVFLDGLEKVGEFSLTLLAKNQNGYKNLSKLSSISYSRFTRNRNKIKYDELKKYSDDLYILSGGINSEVVKGILDLENTQVRRVVEKLGKDFGDNFFIEVPAVERLEKARKMLFDIVRKNKFDNFVITNDVYYPNRKDAVLQKIVESIKEGSKIDTEKSENSEILYDDLYLKSENEIEKSFENKEYSEFYETGINNVEKIMENCNVDFEFHHFKFPKYSLPQNISEKEFLRNLVFEGLFHKYLKKSVSDSEKLQLDKNFEIIQKEIAKDEIAGQKLKEVKIREELLKNNLENVLERAEYELEIIDKMGYNGYFIIVWDFIKFSRENGVYVGPGRGSAAGSIVSYALNITEIDPLEYNLIFERFLNPERISMPDIDIDFDQEQREIVINYVVNKYGAEYVAHIITFGTLKARLAIRDVGRVLNVSLVKVDKIAKMIPFNTELKDALNNIPEFRKMYGTDREIKKVIDYSLKLEGKVRHASVHAAGVVISKDVLSDEIPTYSDGKTKIVSTQYQMKELEELGILKMDFLGLKNLTILRKTVENIEKRRKTKIVLNDIPLNDEKTYELLTKADTMGVFQCESAGIRSLMKKMKIEKFEDIIALLALYRPGPLRSGMVDDFINVKNNRTEIKYIDDSLKYILEETYGIILYQEQVMKIVSEMANYSLGEADELRRAIGKKNPELMKKNREKFVTNAEKNGVFSKKANEIYDLVEKFGGYGFNKSHSAAYALIVYWTAYFKANYPLEFFAAIITTEVHNLDRFVVFVNEAKEKGINIFLPDVNLSDYDFEIEESFENNNEIKKMGIRFGLFAVKGIGAALINEIKKERENGDFSSYEDFVYRMKQNGITKKQLESFILSGALDKLNGNRFEKYKSIDKILEYSQKKYESEEDLQMILFSGEKKFKGKFEMEKADEFPQKVLLENEKEYLGIYVSSHPLNEKKRLINIISHNKISEISQKELKKVRIIGIVKNVKKFATRAGKEPMVKFEMEDFQKNIEVVCFPREYVTFGYKITEGQIMVLEGIVNSEQNKNTVILNNICNIENLEENKNLKLYILIDEEVKEKNQKLKEIILKNKGDNQVFLAFKTNEKKEVVKLSKKYNVNLSLKFIRKVAKLFGIERIKLR
>CP001685.1|ACV38384.1|503917_505906_-|small-GTP-binding-protein
MRIYDSNNIRNVGILGHSGSGKSNMVEGLEFTAGLTNRIVNNENDTKITNSLSLHAIEYQTSKFNFVDIPGYGDFFGEVESGLAAVDGAIIIVDGTTDLTVGTETALELTDSRNIPRFIFVNKIDNEKADYEKILSQLREKYGKRIAPFHVPWGRGDEFRGHINVVDMFAREFDKNKNECATVDMPADMDDEINPIREMLLEAVAETDEELMDKYFNGEEFTTAEIHRGLRQGVLDCSVIPVICGSTLKNIGLHTTFDMVKDYLPAPIDIEKIQPEKNTFVCQIFKTTIDSFLGKVSYAKVYSGEIKQDSEVFNVNKKIKEKIGKIHTFVINKMDELQKAIAGDIVVFSKFNSTKTSDTLSTNEKEASVKDITFPKPQLFVAIEPLNKNDDEKMSSGLNRLMEEDPSFTWHRNLETGQTVLGVQGELHSATVIEKLKAKFGISIKTIELKVPYRETIKGTSEVQGKHKKQSGGHGQYGDVLIKFSHVDEDFVFEETITGGSVPKSYIPAVEKGLRESLKEGVLAGYPVTNIKAVLYDGSYHDVDSSELAFKIAANLAFKKGMLAAKPILLEPIMELTIIIPEEYIGDVMGDINKKRGRVMGMEAHKGTKQKIIAEAPMSETFKYANELKAITQGRGYFEMKLVRYEELMGDLAQKVIDSRKK
>CP001685.1|ACV38385.1|506269_507454_+|hypothetical-protein
MERKVKNENKGLEAFGNDEIFDIIKNNLKNDKEYKVNFGYMNGFHKSKIDNSQKLFKNSSFNQNISDSSEKNQFNFSSENSIPYVIINLSDDFSYENSSKYITQIKKNNKLGIKNLGYVTTNEYLKSIDKIYSEIDKYMEFFGENYISGIFFDELSSGKNLSEVKYMSQLYNYVKTKYPDSLVVGNPGGTITDEMSKYADLWLTSEVSADDYINNWIPRNYEFENNPANSSHIVHVIHSAKPEQYETLVNLSKERNAGFLMIINADENVENEDLIDEDDCDDEILDFDKMEIIENDENISHEFVSSGKYNIAGDLKISNLDLFTLLNDYYKNSTKRDFFKNMFNNNFDFGYNISNEFKIDYSYKIKDEIGNFEIKLTKNKNFSFFYSSIFKNVI
>CP001685.1|ACV38386.1|507727_507991_-|integral-membrane-protein
MNKKKINTLVGSIGAFIGIIVFITYIPQIIANIGGQKAQPWQPLSASISCLIWVIYGWTKEPKKDYILIVPNAAGVILGFLTFITAI
>CP001685.1|ACV38387.1|508124_509642_+|glycerol-kinase
MDNQKKYIIALDQGTTSSRAIIFDKNLNIIEKAQKEFTQIFPQPGWVEHNAMEIWASQRSVLTEVIAQSGISLKDVAAIGITNQRETVIVWDKNTGEPVYNAIVWQCRRTAEICEELKNRGLEDYVNENTGLIIDAYFSGTKVKWILDNVKGAREKAENGELLFGTVDTWLVWKLTGGKVHVTDFTNASRTMLFNIKNLEWDKKILKELNIPESMLPEVRNSSEIYGKTRMGITIGEENGTSIPISGIAGDQQAALFGQAGFHTGDIKNTYGTGCFMLMNTGNKCIKSNNGLLTTIAIGIDGKVEYALEGSIFIGGAVIQWFRDELRFFDKASDTEYFAQQVDDNGGVYLVPAFVGLGSPYWDMYARGTIVGLTRGSNKNHIIRAALESIAYQSKDLINAMKEDSGIEINSLKVDGGATANNFLMQFQSDILNTKVLRPEIIETTALGAAYLAGLAVGFWKNKEEIKKNWRLNKEFLPNLSENLRKKYYKCWKKAVEKAKSWEED
>CP001685.1|ACV38388.1|509721_511404_-|Chloride-channel-core
MAKDVLHELRDISSLKSRRNNIVLIFLCFLVGIFSGIIVGTYTLLLKKMSIFREFFTTNLELPKIIIGIIVFILMGMAVQFMLSKYPLISGSGIPQVSGLLTKKVKFKWFGELVTKFVGGILAIGTGMSMGREGPSVHLGALVGSGIKEVTKRSEVEEKYLVTCGASAGISSTFNAPLAGVIFSLEELHKFFSPLLLICTLVASGTSNFISRMILGSHTSFQYNFMLPKDIPYYIFAIITVIFCIIITITGKAFSYFLLLIQRQYKKWKLNKYVKMLLFMIIAYAIAVFFSDITGGGHELIEEMFGKNVLLRTLIIILVLKFFYTMLCYATGAPGGIFLPMLVIGALTGKVYGEILNHYFSIPNEIIVHFMLLGMAAYFTAVVRAPITGITLILEMTGNFSYLYMLIIVCTITYIFTELLKMEPIYERLYFNMFHKQILAEDKQNSENEKHARRLEMLEKWWKNKKIDIGVKSNRKNAKDKIVTLLIPVGANSEFDNKTVKDLNLPENLLIVSVRKAGKDSIARGDTLIQSGNQLVIITDYTTAQKYAGELKEKGMKIVE
>CP001685.1|ACV38389.1|511428_512397_-|ApbE-family-lipoprotein
MMYKVQVRFLFHSDIKIKIPEIYDDSIFDKLFGILEDIDEKYNSYSENSYIDKINKNSGHFVKVNDETIKILSKIIHLSKIIGGEYDITIMPLIRLWGFYKQNPILPSLDKIKKAKRLVDYKKIIIDKKRNRIKIEKNQEIITGSFIKAYAIEKIVEEMKKIGIKDAIVNAGGSSIIAIDEWGIIAENPEEEREILRNKKGMPIKITQNQYAGDDEYNDLFEIKIKNKSYSTSNQKNTYLLINNEKYGHIISPKTGFPSQNKQVGVITENAFFGDIISTGMYNQTPEKFYEIMGKLSKEMEISGFLIDKDGEIFYFNMEKYF
>CP001685.1|ACV38390.1|512418_512886_-|hypothetical-protein
MSNKKKIILFLGAVSLIAFGNYKQFTKNKAQTTVEGKTSEKATSSVNGTAKEGKVSEKATSSAGAKTGTEGKNSEQATSSAGSNQKPQNNGNPTEAKSAQQPQNKPVNQNEQSGNEKKSENNQNSNTQQQPKNSGDLKLDDTDVKDKFKLDTSKK
>CP001685.1|ACV38391.1|513091_514189_-|transposase,-IS605-OrfB-family
MKYNLAFKYRIYPNKEQELLVNKTFGCVRFVYNTILYTANKIYEETGKNKIITPASLKSENQFLKEVDSLALSNAQLNVKRSFTNFFQKRAKFPKFKSKKTSVKSYTTNCVNNSIRIEENKYLVLPKLKKIKLKYHREIPKDYKIKSVTLTNSNGNYYVSVLTEFEKEIQKMPSNDKVIGLDFSMSELFVSSENQRADYPRYFKMLEKKLKKLQKSLSRKVKFSKNWYKQKEKISKLHEYIKNCRGDFLHKLSKKLSEAYNTVAVEDLNMKGMSQALNFGKSVGDNGWGMFLRMLEYKLMFSGKQFLKIDKWFPSSKTCSKCGNVKEELKLSERSYKCECCGIEIDRDYNAALNIKNIGKEMLKY
>CP001685.1|ACV38392.1|514193_514592_-|transposase-IS200-family-protein
MSYNSNYHSVFDINYHMIFCIKYRRVVINDEISNRLKEIFEKICPKYNIVLKEWEHDVDHIHMLINAMPNTELSKFVNTYKSASSRLIKKEFPEIRRRLWKEYFWSRSYLVVSVGGAPLEIIKKYIQNQKEV
>CP001685.1|ACV38393.1|514860_515700_+|ATP-NAD/AcoX-kinase
MEKSEKLKNNDLNRKNKVEKVRIVKSGYGNENLLKDFYDYLKEKNIQEVFGVEEADLIISLGGDGTMLIAAKEAITGNIPVLAVNMGSLGYLAEVKPQNAVKMLEDYENGNYKIEERAFLEVKYEDNIFYALNELVITKGGHEAHLIQVEVYSNDIFVNKYRADGIIVATPTGSTAYSLSAGGSIVHPGLNALSITPLAPQSLTARPIIVDGCEVLSFKATSRDEAVHLNIDGNQWFQIQQNDLVSARLSKKKIRIVKPMDSDYYSILRQKLKWGDSVL

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Crispr_ID: CP001685_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP001685_2

879301-884706

Unclear

Consensus_repeat	Method
GTTTTAATAGCACAAATTGTATTGTAAAT	PILER-CR
GTTTTAATAGCACAAATTGTATTGTAAAT	CRISPRCasFinder
NNNNNNNNNNNNNGTTTTAATAGCACAAATTGTATTGTAAAT	CRT
GTTTTAATAGCACAAATTGTATTGTAAAT	CRT

92 spacers

cas6,cas8b2,cas7,cas5,cas3,cas4,cas1,cas2

The CRISPR arrays of CP001685_2

>merge|CP001685|2|879301-884706|PILER-CR,CRISPRCasFinder,CRT,CRT
GTTTTAATAGCACAAATTGTATTGTAAATTATTAGAAACCTTGTTTTTAATAACAGGATTTTTTGTTTTAATAGCACAAATTGTATTGTAAATCTCCCTACATCTTGTATTTTTAACACTCTTGTGCTAGTTTTAATAGCACAAATTGTATTGTAAATGCAAATGAAACTTTTAGTTGTGGATTGAAACATCCGTTTTAATAGCACAAATTGTATTGTAAATGGAATAAAAGAAAAATTGGAGGAATACTTAAACCACGTTTTAATAGCACAAATTGTATTGTAAATGATGCTTTTAGTGCTTCTGCGAAAGTTTCAAAACTGTTTTAATAGCACAAATTGTATTGTAAATCAAGTATCTACCATCTGCATCTTTCCACAATTTCAGTTTTAATAGCACAAATTGTATTGTAAATAACACATTCAGGCACTCAATGACTATCTTAGCTGGCGTTTTAATAGCACAAATTGTATTGTAAATTCGTATATTATATGAGGATTATAATACTTGTCAGCTGTTTTAATAGCACAAATTGTATTGTAAATGCTTTTCAACCCATTTAATATCCGTTTTAATGTTGTGTTTTAATAGCACAAATTGTATTGTAAATCATCTTAAAGCTGTATTTAATACCACTGACAAGGAAGTTTTAATAGCACAAATTGTATTGTAAATCTCCTCTTTGCCAATGTTGTTTTTAATTTGCACTCGGTTTTAATAGCACAAATTGTATTGTAAATGATTAGTAAATACATAATGCAATAAGTCTAAATCATGTTTTAATAGCACAAATTGTATTGTAAATAATCACTTTGTATGCTTGACTTAAACTTACTTCCAAGTTTTAATAGCACAAATTGTATTGTAAATTTGCGTCTTCGATATAATCGAGAACGATTCTTTCAAGTTTTAATAGCACAAATTGTATTGTAAATGCTTTCTTGATATTATTATACTATACTTTTTATCAAAAGTTTTAATAGCACAAATTGTATTGTAAATGCCTGTTAAGGACTTCAACAAGTTTTTCGTTTTGTGGTTTTAATAGCACAAATTGTATTGTAAATTTGTGAATATTTACTATTTGTTTCTCAACTTTAAATGTTTTAATAGCACAAATTGTATTGTAAATTCCGCCGCCGGACCGTAAATAATCGTATTATTGCTGTTTTAATAGCACAAATTGTATTGTAAATAATTGTATTATATGGAATGTTGGGACTGGCTGGTAAAGTTTTAATAGCACAAATTGTATTGTAAATGTGTAAACGGAGATTACAACAACATTATTAGAAAACGTTTTAATAGCACAAATTGTATTGTAAATATAATACCATTAAAGGCTTTATTTTTGAGTTTAATTGTTTTAATAGCACAAATTGTATTGTAAATTTGTATTGTTTGTGTCAAATTCTCCTAGAAGTGTACGTTTTAATAGCACAAATTGTATTGTAAATACAGGTATGGCACGTTCGGTTAGGTCTAATTAAATCGTTTTAATAGCACAAATTGTATTGTAAATTTTTCTCTAATTCTTTAATTTTTGAATACAAACTGTTTTAATAGCACAAATTGTATTGTAAATTTCTTTATCTGAGCCTAAAATATCATCTAAAATTCTGTTTTAATAGCACAAATTGTATTGTAAATCAAAATTATTGGACTTTGGTAACTTTGATACAATTGTTTTAATAGCACAAATTGTATTGTAAATTATATTGCCTTGTACTTGCCTTTACATATTGGTATCGTTTTAATAGCACAAATTGTATTGTAAATTAAAAATTGATAAAACTTGTTAATTAATACTTATTTGTTTTAATAGCACAAATTGTATTGTAAATGTTTTTAATGGAAAAAATGCAATAGATATTATGGAGTTTTAATAGCACAAATTGTATTGTAAATTTATTCAACATCTCCTTATAGTTTTTATTAATTTTTGTTTTAATAGCACAAATTGTATTGTAAATTTAGTAAATACTTGTTGGGAAACAGAGAAATTATAGTTTTAATAGCACAAATTGTATTGTAAATGATGTAAAAGACGAAGAAGGGAATATTAATCTTAAAGTTTTAATAGCACAAATTGTATTGTAAATGAAAAAGGACTTAAAAGATTTCGAGCAAGAAGAAAAGTTTTAATAGCACAAATTGTATTGTAAATACTTTTGAGGAAACTGCTGAACACATCTTGAAAGATGTTTTAATAGCACAAATTGTATTGTAAATAGTTATATCGCCAAAAACCTTTTTCAGCCTTCTGTAGTTTTAATAGCACAAATTGTATTGTAAATCTTGTTGTGCTTTAAATTTAGTTAGTTTTGCCATCTGTTTTAATAGCACAAATTGTATTGTAAATGCTTACACATTTGCTCAAGGAATTAATGGACGTTGGGTTTTAATAGCACAAATTGTATTGTAAATTTCCCGCCCGCAGCCCTTCAGTTGTGCCAAGTGTGGTTTTAATAGCACAAATTGTATTGTAAATTCAACTCCCCTTATTTTCTACCAGTACCTTTAAAAAGTTTTAATAGCACAAATTGTATTGTAAATATTCATTTATATAATCATATTCTTTTAATTTCTTTAGTTTTAATAGCACAAATTGTATTGTAAATATACAAATTGTCTCTTTCCAAAAGTTATTAAATATTGTTTTAATAGCACAAATTGTATTGTAAATTTAAATCAATGATAAATTATTTTCATATCTGAACTTGTTTTAATAGCACAAATTGTATTGTAAATTAGTGTTAGAGGAATTAACACAATTAAAGATTAATTGTTTTAATAGCACAAATTGTATTGTAAATATCAAAAAATAAGTATATTAATGATGATAATAATATGTTTTAATAGCACAAATTGTATTGTAAATTTTTCACTTTCTCGTTGTTGCTGTTTACTAATGTTGTTTTAATAGCACAAATTGTATTGTAAATCGAATTCTTCCATATCTGAAAATTTGCCTTTTTTAGTTTTAATAGCACAAATTGTATTGTAAATTGCGGAATTGGCTTTTATTTAATTGAATGTTATTGTGTTTTAATAGCACAAATTGTATTGTAAATTTCAATACTATATTCTCTAATACTGGAATATCTTTGTTTTAATAGCACAAATTGTATTGTAAATAAAGGTTTCTAAAAACAATATCGGCGATTTCTGACAAGTTTTAATAGCACAAATTGTATTGTAAATATACAAATAGAAGTAGTTGCTAACAATAACAATAAGTTTTAATAGCACAAATTGTATTGTAAATTTTCTTCCGCAAATTGCACAAGTTCTTGACTTTAAGTTTTAATAGCACAAATTGTATTGTAAATTGATATTAAGAGAAAAGATTTGGAAGATGCTTTATTGTTTTAATAGCACAAATTGTATTGTAAATATTCACAATCATACACTCCATTAAACGTTGTAGTGGTTTTAATAGCACAAATTGTATTGTAAATGTTGCAGGACTGTTTATGGGAATTGCTGAAGCAATGTTTTAATAGCACAAATTGTATTGTAAATACAGTATCTTGTACTAATCTGTACTCTGAACTTTCGTTTTAATAGCACAAATTGTATTGTAAATTATGTTTACCGATTTCCCTTTTGACGCTTTTATAAGGTTTTAATAGCACAAATTGTATTGTAAATCAATTTCGTGCAGTAAGTCATCTTCTTTCTTTTCATGTTTTAATAGCACAAATTGTATTGTAAATTCAAATTTTTGTTCTTTACGATGCAGATTGTTTTGTGTTTTAATAGCACAAATTGTATTGTAAATTGATATTAAGGAGGTGTAGATAATAATTGAGTAGTAGTTTTAATAGCACAAATTGTATTGTAAATATAATGGTAATTGGGACTTTTGCGGGCGTGGCCTTGGTTTTAATAGCACAAATTGTATTGTAAATTTACTCAATCATATAATTTAAATGATAATATGTTTGGTTTTAATAGCACAAATTGTATTGTAAATAATTATGAAATATGGAAAGGGTATGTTTTTTCAAAAGTTTTAATAGCACAAATTGTATTGTAAATTTATCTTTGTATGTTTTTACATCACAATAAAAATAAGTTTTAATAGCACAAATTGTATTGTAAATACAATCATCTGTAGGAGTGTGATTTATGGACATAAAGTTTTAATAGCACAAATTGTATTGTAAATAATTTTGATAGCTTTTCTTCTATTTTTGAAGCGGCTGTTTTAATAGCACAAATTGTATTGTAAATTAAAAATTTATTTCTTAAATAATTTCTTAATTCTGGTTTTAATAGCACAAATTGTATTGTAAATGTTGGGAGGACGAATAATGAGAGAAATAAAATTTAGGTTTTAATAGCACAAATTGTATTGTAAATTTTGTCTATAAGGAAAATATGGATATTTTTGAACTGGGTTTTAATAGCACAAATTGTATTGTAAATGTTACAGTTCCTCATATTCTTTCAGGTTTTCCAGTATGTTTTAATAGCACAAATTGTATTGTAAATAATAACCGTATTCGTCAGTTTTAAGATTATGTTCATGTTTTAATAGCACAAATTGTATTGTAAATCAATTCTGCTTTTTCTATCCAGTTCTGAACATACAGTGTTTTAATAGCACAAATTGTATTGTAAATTATAAACTGGCAATTGAAAAATCGTATTCGGGATGTGTTTTAATAGCACAAATTGTATTGTAAATTATCTTCCTTAGTTATTTGATAATACTTTTTCCAAGTTTTAATAGCACAAATTGTATTGTAAATCTTTGTGGTTGTTTTCAAAGATAAGTTCCTTTGCCTGTTTTAATAGCACAAATTGTATTGTAAATAGAAGATTTTATGTATGTAAGAAATGGTAAACAAGTGTTTTAATAGCACAAATTGTATTGTAAATGGAGAATTGAAGAGCCTTTAAAAATTCTGAAGGTACGTTTTAATAGCACAAATTGTATTGTAAATTGTCTAGTGAGCGGAAGACGACCCTTGAAACGAAGGTTTTAATAGCACAAATTGTATTGTAAATCATCTTCGGTGAAAGCAAATTTTTCTTGTAACTGACGTTTTAATAGCACAAATTGTATTGTAAATCGTCTAGTGTAGCAGTTCTTAGCCCACTGCGCAAGGTTTTAATAGCACAAATTGTATTGTAAATCCTTTTGAGTTATAATAATATCGCCAAATAAAATCGTTTTAATAGCACAAATTGTATTGTAAATTTTTTATCACATAATTCTAATGAATAATTATCAAAGTTTTAATAGCACAAATTGTATTGTAAATCAAAACAAGGAGCGATAGTTTCGACTATTTTTGGAGGTTTTAATAGCACAAATTGTATTGTAAATTTCTGTACATTTGCTATTTTATTCCAGCCCATAAAAGTTTTAATAGCACAAATTGTATTGTAAAT

>CP001685|2|2|879301-884706|PILER-CR
GTTTTAATAGCACAAATTGTATTGTAAAT	TATTAGAAACCTTGTTTTTAATAACAGGATTTTTT
GTTTTAATAGCACAAATTGTATTGTAAAT	CTCCCTACATCTTGTATTTTTAACACTCTTGTGCTA
GTTTTAATAGCACAAATTGTATTGTAAAT	GCAAATGAAACTTTTAGTTGTGGATTGAAACATCC
GTTTTAATAGCACAAATTGTATTGTAAAT	GGAATAAAAGAAAAATTGGAGGAATACTTAAACCAC
GTTTTAATAGCACAAATTGTATTGTAAAT	GATGCTTTTAGTGCTTCTGCGAAAGTTTCAAAACT
GTTTTAATAGCACAAATTGTATTGTAAAT	CAAGTATCTACCATCTGCATCTTTCCACAATTTCA
GTTTTAATAGCACAAATTGTATTGTAAAT	AACACATTCAGGCACTCAATGACTATCTTAGCTGGC
GTTTTAATAGCACAAATTGTATTGTAAAT	TCGTATATTATATGAGGATTATAATACTTGTCAGCT
GTTTTAATAGCACAAATTGTATTGTAAAT	GCTTTTCAACCCATTTAATATCCGTTTTAATGTTGT
GTTTTAATAGCACAAATTGTATTGTAAAT	CATCTTAAAGCTGTATTTAATACCACTGACAAGGAA
GTTTTAATAGCACAAATTGTATTGTAAAT	CTCCTCTTTGCCAATGTTGTTTTTAATTTGCACTCG
GTTTTAATAGCACAAATTGTATTGTAAAT	GATTAGTAAATACATAATGCAATAAGTCTAAATCAT
GTTTTAATAGCACAAATTGTATTGTAAAT	AATCACTTTGTATGCTTGACTTAAACTTACTTCCAA
GTTTTAATAGCACAAATTGTATTGTAAAT	TTGCGTCTTCGATATAATCGAGAACGATTCTTTCAA
GTTTTAATAGCACAAATTGTATTGTAAAT	GCTTTCTTGATATTATTATACTATACTTTTTATCAAAA
GTTTTAATAGCACAAATTGTATTGTAAAT	GCCTGTTAAGGACTTCAACAAGTTTTTCGTTTTGTG
GTTTTAATAGCACAAATTGTATTGTAAAT	TTGTGAATATTTACTATTTGTTTCTCAACTTTAAAT
GTTTTAATAGCACAAATTGTATTGTAAAT	TCCGCCGCCGGACCGTAAATAATCGTATTATTGCT
GTTTTAATAGCACAAATTGTATTGTAAAT	AATTGTATTATATGGAATGTTGGGACTGGCTGGTAAA
GTTTTAATAGCACAAATTGTATTGTAAAT	GTGTAAACGGAGATTACAACAACATTATTAGAAAAC
GTTTTAATAGCACAAATTGTATTGTAAAT	ATAATACCATTAAAGGCTTTATTTTTGAGTTTAATT
GTTTTAATAGCACAAATTGTATTGTAAAT	TTGTATTGTTTGTGTCAAATTCTCCTAGAAGTGTAC
GTTTTAATAGCACAAATTGTATTGTAAAT	ACAGGTATGGCACGTTCGGTTAGGTCTAATTAAATC
GTTTTAATAGCACAAATTGTATTGTAAAT	TTTTCTCTAATTCTTTAATTTTTGAATACAAACT
GTTTTAATAGCACAAATTGTATTGTAAAT	TTCTTTATCTGAGCCTAAAATATCATCTAAAATTCT
GTTTTAATAGCACAAATTGTATTGTAAAT	CAAAATTATTGGACTTTGGTAACTTTGATACAATT
GTTTTAATAGCACAAATTGTATTGTAAAT	TATATTGCCTTGTACTTGCCTTTACATATTGGTATC
GTTTTAATAGCACAAATTGTATTGTAAAT	TAAAAATTGATAAAACTTGTTAATTAATACTTATTT
GTTTTAATAGCACAAATTGTATTGTAAAT	GTTTTTAATGGAAAAAATGCAATAGATATTATGGA
GTTTTAATAGCACAAATTGTATTGTAAAT	TTATTCAACATCTCCTTATAGTTTTTATTAATTTTT
GTTTTAATAGCACAAATTGTATTGTAAAT	TTAGTAAATACTTGTTGGGAAACAGAGAAATTATA
GTTTTAATAGCACAAATTGTATTGTAAAT	GATGTAAAAGACGAAGAAGGGAATATTAATCTTAAA
GTTTTAATAGCACAAATTGTATTGTAAAT	GAAAAAGGACTTAAAAGATTTCGAGCAAGAAGAAAA
GTTTTAATAGCACAAATTGTATTGTAAAT	ACTTTTGAGGAAACTGCTGAACACATCTTGAAAGAT
GTTTTAATAGCACAAATTGTATTGTAAAT	AGTTATATCGCCAAAAACCTTTTTCAGCCTTCTGTA
GTTTTAATAGCACAAATTGTATTGTAAAT	CTTGTTGTGCTTTAAATTTAGTTAGTTTTGCCATCT
GTTTTAATAGCACAAATTGTATTGTAAAT	GCTTACACATTTGCTCAAGGAATTAATGGACGTTGG
GTTTTAATAGCACAAATTGTATTGTAAAT	TTCCCGCCCGCAGCCCTTCAGTTGTGCCAAGTGTG
GTTTTAATAGCACAAATTGTATTGTAAAT	TCAACTCCCCTTATTTTCTACCAGTACCTTTAAAAA
GTTTTAATAGCACAAATTGTATTGTAAAT	ATTCATTTATATAATCATATTCTTTTAATTTCTTTA
GTTTTAATAGCACAAATTGTATTGTAAAT	ATACAAATTGTCTCTTTCCAAAAGTTATTAAATATT
GTTTTAATAGCACAAATTGTATTGTAAAT	TTAAATCAATGATAAATTATTTTCATATCTGAACTT
GTTTTAATAGCACAAATTGTATTGTAAAT	TAGTGTTAGAGGAATTAACACAATTAAAGATTAATT
GTTTTAATAGCACAAATTGTATTGTAAAT	ATCAAAAAATAAGTATATTAATGATGATAATAATAT
GTTTTAATAGCACAAATTGTATTGTAAAT	TTTTCACTTTCTCGTTGTTGCTGTTTACTAATGTT
GTTTTAATAGCACAAATTGTATTGTAAAT	CGAATTCTTCCATATCTGAAAATTTGCCTTTTTTA
GTTTTAATAGCACAAATTGTATTGTAAAT	TGCGGAATTGGCTTTTATTTAATTGAATGTTATTGT
GTTTTAATAGCACAAATTGTATTGTAAAT	TTCAATACTATATTCTCTAATACTGGAATATCTTT
GTTTTAATAGCACAAATTGTATTGTAAAT	AAAGGTTTCTAAAAACAATATCGGCGATTTCTGACAA
GTTTTAATAGCACAAATTGTATTGTAAAT	ATACAAATAGAAGTAGTTGCTAACAATAACAATAA
GTTTTAATAGCACAAATTGTATTGTAAAT	TTTCTTCCGCAAATTGCACAAGTTCTTGACTTTAA
GTTTTAATAGCACAAATTGTATTGTAAAT	TGATATTAAGAGAAAAGATTTGGAAGATGCTTTATT
GTTTTAATAGCACAAATTGTATTGTAAAT	ATTCACAATCATACACTCCATTAAACGTTGTAGTG
GTTTTAATAGCACAAATTGTATTGTAAAT	GTTGCAGGACTGTTTATGGGAATTGCTGAAGCAAT
GTTTTAATAGCACAAATTGTATTGTAAAT	ACAGTATCTTGTACTAATCTGTACTCTGAACTTTC
GTTTTAATAGCACAAATTGTATTGTAAAT	TATGTTTACCGATTTCCCTTTTGACGCTTTTATAAG
GTTTTAATAGCACAAATTGTATTGTAAAT	CAATTTCGTGCAGTAAGTCATCTTCTTTCTTTTCAT
GTTTTAATAGCACAAATTGTATTGTAAAT	TCAAATTTTTGTTCTTTACGATGCAGATTGTTTTGT
GTTTTAATAGCACAAATTGTATTGTAAAT	TGATATTAAGGAGGTGTAGATAATAATTGAGTAGTA
GTTTTAATAGCACAAATTGTATTGTAAAT	ATAATGGTAATTGGGACTTTTGCGGGCGTGGCCTTG
GTTTTAATAGCACAAATTGTATTGTAAAT	TTACTCAATCATATAATTTAAATGATAATATGTTTG
GTTTTAATAGCACAAATTGTATTGTAAAT	AATTATGAAATATGGAAAGGGTATGTTTTTTCAAAA
GTTTTAATAGCACAAATTGTATTGTAAAT	TTATCTTTGTATGTTTTTACATCACAATAAAAATAA
GTTTTAATAGCACAAATTGTATTGTAAAT	ACAATCATCTGTAGGAGTGTGATTTATGGACATAAA
GTTTTAATAGCACAAATTGTATTGTAAAT	AATTTTGATAGCTTTTCTTCTATTTTTGAAGCGGCT
GTTTTAATAGCACAAATTGTATTGTAAAT	TAAAAATTTATTTCTTAAATAATTTCTTAATTCTG
GTTTTAATAGCACAAATTGTATTGTAAAT	GTTGGGAGGACGAATAATGAGAGAAATAAAATTTAG
GTTTTAATAGCACAAATTGTATTGTAAAT	TTTGTCTATAAGGAAAATATGGATATTTTTGAACTGG
GTTTTAATAGCACAAATTGTATTGTAAAT	GTTACAGTTCCTCATATTCTTTCAGGTTTTCCAGTAT
GTTTTAATAGCACAAATTGTATTGTAAAT	AATAACCGTATTCGTCAGTTTTAAGATTATGTTCAT
GTTTTAATAGCACAAATTGTATTGTAAAT	CAATTCTGCTTTTTCTATCCAGTTCTGAACATACAGT
GTTTTAATAGCACAAATTGTATTGTAAAT	TATAAACTGGCAATTGAAAAATCGTATTCGGGATGT
GTTTTAATAGCACAAATTGTATTGTAAAT	TATCTTCCTTAGTTATTTGATAATACTTTTTCCAA
GTTTTAATAGCACAAATTGTATTGTAAAT	CTTTGTGGTTGTTTTCAAAGATAAGTTCCTTTGCCT
GTTTTAATAGCACAAATTGTATTGTAAAT	AGAAGATTTTATGTATGTAAGAAATGGTAAACAAGT
GTTTTAATAGCACAAATTGTATTGTAAAT	GGAGAATTGAAGAGCCTTTAAAAATTCTGAAGGTAC
GTTTTAATAGCACAAATTGTATTGTAAAT	TGTCTAGTGAGCGGAAGACGACCCTTGAAACGAAG
GTTTTAATAGCACAAATTGTATTGTAAAT	CATCTTCGGTGAAAGCAAATTTTTCTTGTAACTGAC
GTTTTAATAGCACAAATTGTATTGTAAAT	CGTCTAGTGTAGCAGTTCTTAGCCCACTGCGCAAG
GTTTTAATAGCACAAATTGTATTGTAAAT	CCTTTTGAGTTATAATAATATCGCCAAATAAAATC
GTTTTAATAGCACAAATTGTATTGTAAAT	TTTTTATCACATAATTCTAATGAATAATTATCAAA
GTTTTAATAGCACAAATTGTATTGTAAAT	CAAAACAAGGAGCGATAGTTTCGACTATTTTTGGAG
GTTTTAATAGCACAAATTGTATTGTAAAT	TTCTGTACATTTGCTATTTTATTCCAGCCCATAAAA
GTTTTAATAGCACAAATTGTATTGTAAAT

>CP001685|2|2|879301-884706|CRISPRCasFinder
GTTTTAATAGCACAAATTGTATTGTAAAT	TATTAGAAACCTTGTTTTTAATAACAGGATTTTTT
GTTTTAATAGCACAAATTGTATTGTAAAT	CTCCCTACATCTTGTATTTTTAACACTCTTGTGCTA
GTTTTAATAGCACAAATTGTATTGTAAAT	GCAAATGAAACTTTTAGTTGTGGATTGAAACATCC
GTTTTAATAGCACAAATTGTATTGTAAAT	GGAATAAAAGAAAAATTGGAGGAATACTTAAACCAC
GTTTTAATAGCACAAATTGTATTGTAAAT	GATGCTTTTAGTGCTTCTGCGAAAGTTTCAAAACT
GTTTTAATAGCACAAATTGTATTGTAAAT	CAAGTATCTACCATCTGCATCTTTCCACAATTTCA
GTTTTAATAGCACAAATTGTATTGTAAAT	AACACATTCAGGCACTCAATGACTATCTTAGCTGGC
GTTTTAATAGCACAAATTGTATTGTAAAT	TCGTATATTATATGAGGATTATAATACTTGTCAGCT
GTTTTAATAGCACAAATTGTATTGTAAAT	GCTTTTCAACCCATTTAATATCCGTTTTAATGTTGT
GTTTTAATAGCACAAATTGTATTGTAAAT	CATCTTAAAGCTGTATTTAATACCACTGACAAGGAA
GTTTTAATAGCACAAATTGTATTGTAAAT	CTCCTCTTTGCCAATGTTGTTTTTAATTTGCACTCG
GTTTTAATAGCACAAATTGTATTGTAAAT	GATTAGTAAATACATAATGCAATAAGTCTAAATCAT
GTTTTAATAGCACAAATTGTATTGTAAAT	AATCACTTTGTATGCTTGACTTAAACTTACTTCCAA
GTTTTAATAGCACAAATTGTATTGTAAAT	TTGCGTCTTCGATATAATCGAGAACGATTCTTTCAA
GTTTTAATAGCACAAATTGTATTGTAAAT	GCTTTCTTGATATTATTATACTATACTTTTTATCAAAA
GTTTTAATAGCACAAATTGTATTGTAAAT	GCCTGTTAAGGACTTCAACAAGTTTTTCGTTTTGTG
GTTTTAATAGCACAAATTGTATTGTAAAT	TTGTGAATATTTACTATTTGTTTCTCAACTTTAAAT
GTTTTAATAGCACAAATTGTATTGTAAAT	TCCGCCGCCGGACCGTAAATAATCGTATTATTGCT
GTTTTAATAGCACAAATTGTATTGTAAAT	AATTGTATTATATGGAATGTTGGGACTGGCTGGTAAA
GTTTTAATAGCACAAATTGTATTGTAAAT	GTGTAAACGGAGATTACAACAACATTATTAGAAAAC
GTTTTAATAGCACAAATTGTATTGTAAAT	ATAATACCATTAAAGGCTTTATTTTTGAGTTTAATT
GTTTTAATAGCACAAATTGTATTGTAAAT	TTGTATTGTTTGTGTCAAATTCTCCTAGAAGTGTAC
GTTTTAATAGCACAAATTGTATTGTAAAT	ACAGGTATGGCACGTTCGGTTAGGTCTAATTAAATC
GTTTTAATAGCACAAATTGTATTGTAAAT	TTTTCTCTAATTCTTTAATTTTTGAATACAAACT
GTTTTAATAGCACAAATTGTATTGTAAAT	TTCTTTATCTGAGCCTAAAATATCATCTAAAATTCT
GTTTTAATAGCACAAATTGTATTGTAAAT	CAAAATTATTGGACTTTGGTAACTTTGATACAATT
GTTTTAATAGCACAAATTGTATTGTAAAT	TATATTGCCTTGTACTTGCCTTTACATATTGGTATC
GTTTTAATAGCACAAATTGTATTGTAAAT	TAAAAATTGATAAAACTTGTTAATTAATACTTATTT
GTTTTAATAGCACAAATTGTATTGTAAAT	GTTTTTAATGGAAAAAATGCAATAGATATTATGGA
GTTTTAATAGCACAAATTGTATTGTAAAT	TTATTCAACATCTCCTTATAGTTTTTATTAATTTTT
GTTTTAATAGCACAAATTGTATTGTAAAT	TTAGTAAATACTTGTTGGGAAACAGAGAAATTATA
GTTTTAATAGCACAAATTGTATTGTAAAT	GATGTAAAAGACGAAGAAGGGAATATTAATCTTAAA
GTTTTAATAGCACAAATTGTATTGTAAAT	GAAAAAGGACTTAAAAGATTTCGAGCAAGAAGAAAA
GTTTTAATAGCACAAATTGTATTGTAAAT	ACTTTTGAGGAAACTGCTGAACACATCTTGAAAGAT
GTTTTAATAGCACAAATTGTATTGTAAAT	AGTTATATCGCCAAAAACCTTTTTCAGCCTTCTGTA
GTTTTAATAGCACAAATTGTATTGTAAAT	CTTGTTGTGCTTTAAATTTAGTTAGTTTTGCCATCT
GTTTTAATAGCACAAATTGTATTGTAAAT	GCTTACACATTTGCTCAAGGAATTAATGGACGTTGG
GTTTTAATAGCACAAATTGTATTGTAAAT	TTCCCGCCCGCAGCCCTTCAGTTGTGCCAAGTGTG
GTTTTAATAGCACAAATTGTATTGTAAAT	TCAACTCCCCTTATTTTCTACCAGTACCTTTAAAAA
GTTTTAATAGCACAAATTGTATTGTAAAT	ATTCATTTATATAATCATATTCTTTTAATTTCTTTA
GTTTTAATAGCACAAATTGTATTGTAAAT	ATACAAATTGTCTCTTTCCAAAAGTTATTAAATATT
GTTTTAATAGCACAAATTGTATTGTAAAT	TTAAATCAATGATAAATTATTTTCATATCTGAACTT
GTTTTAATAGCACAAATTGTATTGTAAAT	TAGTGTTAGAGGAATTAACACAATTAAAGATTAATT
GTTTTAATAGCACAAATTGTATTGTAAAT	ATCAAAAAATAAGTATATTAATGATGATAATAATAT
GTTTTAATAGCACAAATTGTATTGTAAAT	TTTTCACTTTCTCGTTGTTGCTGTTTACTAATGTT
GTTTTAATAGCACAAATTGTATTGTAAAT	CGAATTCTTCCATATCTGAAAATTTGCCTTTTTTA
GTTTTAATAGCACAAATTGTATTGTAAAT	TGCGGAATTGGCTTTTATTTAATTGAATGTTATTGT
GTTTTAATAGCACAAATTGTATTGTAAAT	TTCAATACTATATTCTCTAATACTGGAATATCTTT
GTTTTAATAGCACAAATTGTATTGTAAAT	AAAGGTTTCTAAAAACAATATCGGCGATTTCTGACAA
GTTTTAATAGCACAAATTGTATTGTAAAT	ATACAAATAGAAGTAGTTGCTAACAATAACAATAA
GTTTTAATAGCACAAATTGTATTGTAAAT	TTTCTTCCGCAAATTGCACAAGTTCTTGACTTTAA
GTTTTAATAGCACAAATTGTATTGTAAAT	TGATATTAAGAGAAAAGATTTGGAAGATGCTTTATT
GTTTTAATAGCACAAATTGTATTGTAAAT	ATTCACAATCATACACTCCATTAAACGTTGTAGTG
GTTTTAATAGCACAAATTGTATTGTAAAT	GTTGCAGGACTGTTTATGGGAATTGCTGAAGCAAT
GTTTTAATAGCACAAATTGTATTGTAAAT	ACAGTATCTTGTACTAATCTGTACTCTGAACTTTC
GTTTTAATAGCACAAATTGTATTGTAAAT	TATGTTTACCGATTTCCCTTTTGACGCTTTTATAAG
GTTTTAATAGCACAAATTGTATTGTAAAT	CAATTTCGTGCAGTAAGTCATCTTCTTTCTTTTCAT
GTTTTAATAGCACAAATTGTATTGTAAAT	TCAAATTTTTGTTCTTTACGATGCAGATTGTTTTGT
GTTTTAATAGCACAAATTGTATTGTAAAT	TGATATTAAGGAGGTGTAGATAATAATTGAGTAGTA
GTTTTAATAGCACAAATTGTATTGTAAAT	ATAATGGTAATTGGGACTTTTGCGGGCGTGGCCTTG
GTTTTAATAGCACAAATTGTATTGTAAAT	TTACTCAATCATATAATTTAAATGATAATATGTTTG
GTTTTAATAGCACAAATTGTATTGTAAAT	AATTATGAAATATGGAAAGGGTATGTTTTTTCAAAA
GTTTTAATAGCACAAATTGTATTGTAAAT	TTATCTTTGTATGTTTTTACATCACAATAAAAATAA
GTTTTAATAGCACAAATTGTATTGTAAAT	ACAATCATCTGTAGGAGTGTGATTTATGGACATAAA
GTTTTAATAGCACAAATTGTATTGTAAAT	AATTTTGATAGCTTTTCTTCTATTTTTGAAGCGGCT
GTTTTAATAGCACAAATTGTATTGTAAAT	TAAAAATTTATTTCTTAAATAATTTCTTAATTCTG
GTTTTAATAGCACAAATTGTATTGTAAAT	GTTGGGAGGACGAATAATGAGAGAAATAAAATTTAG
GTTTTAATAGCACAAATTGTATTGTAAAT	TTTGTCTATAAGGAAAATATGGATATTTTTGAACTGG
GTTTTAATAGCACAAATTGTATTGTAAAT	GTTACAGTTCCTCATATTCTTTCAGGTTTTCCAGTAT
GTTTTAATAGCACAAATTGTATTGTAAAT	AATAACCGTATTCGTCAGTTTTAAGATTATGTTCAT
GTTTTAATAGCACAAATTGTATTGTAAAT	CAATTCTGCTTTTTCTATCCAGTTCTGAACATACAGT
GTTTTAATAGCACAAATTGTATTGTAAAT	TATAAACTGGCAATTGAAAAATCGTATTCGGGATGT
GTTTTAATAGCACAAATTGTATTGTAAAT	TATCTTCCTTAGTTATTTGATAATACTTTTTCCAA
GTTTTAATAGCACAAATTGTATTGTAAAT	CTTTGTGGTTGTTTTCAAAGATAAGTTCCTTTGCCT
GTTTTAATAGCACAAATTGTATTGTAAAT	AGAAGATTTTATGTATGTAAGAAATGGTAAACAAGT
GTTTTAATAGCACAAATTGTATTGTAAAT	GGAGAATTGAAGAGCCTTTAAAAATTCTGAAGGTAC
GTTTTAATAGCACAAATTGTATTGTAAAT	TGTCTAGTGAGCGGAAGACGACCCTTGAAACGAAG
GTTTTAATAGCACAAATTGTATTGTAAAT	CATCTTCGGTGAAAGCAAATTTTTCTTGTAACTGAC
GTTTTAATAGCACAAATTGTATTGTAAAT	CGTCTAGTGTAGCAGTTCTTAGCCCACTGCGCAAG
GTTTTAATAGCACAAATTGTATTGTAAAT	CCTTTTGAGTTATAATAATATCGCCAAATAAAATC
GTTTTAATAGCACAAATTGTATTGTAAAT	TTTTTATCACATAATTCTAATGAATAATTATCAAA
GTTTTAATAGCACAAATTGTATTGTAAAT	CAAAACAAGGAGCGATAGTTTCGACTATTTTTGGAG
GTTTTAATAGCACAAATTGTATTGTAAAT	TTCTGTACATTTGCTATTTTATTCCAGCCCATAAAA
GTTTTAATAGCACAAATTGTATTGTAAAT

>CP001685|2|1|879301-879897|CRT
GTTTTAATAGCACAAATTGTATTGTAAAT	TATTAGAAACCTTGTTTTTAATAACAGGATTTTTT
	TATTAGAAACCTTGTTTTTAATAACAGGATTTTTT
GTTTTAATAGCACAAATTGTATTGTAAAT	CTCCCTACATCTTGTATTTTTAACACTCTTGTGCTA
	CTCCCTACATCTTGTATTTTTAACACTCTTGTGCTA
GTTTTAATAGCACAAATTGTATTGTAAAT	GCAAATGAAACTTTTAGTTGTGGATTGAAACATCC
	GCAAATGAAACTTTTAGTTGTGGATTGAAACATCC
GTTTTAATAGCACAAATTGTATTGTAAAT	GGAATAAAAGAAAAATTGGAGGAATACTTAAACCAC
	GGAATAAAAGAAAAATTGGAGGAATACTTAAACCAC
GTTTTAATAGCACAAATTGTATTGTAAAT	GATGCTTTTAGTGCTTCTGCGAAAGTTTCAAAACT
	GATGCTTTTAGTGCTTCTGCGAAAGTTTCAAAACT
GTTTTAATAGCACAAATTGTATTGTAAAT	CAAGTATCTACCATCTGCATCTTTCCACAATTTCA
	CAAGTATCTACCATCTGCATCTTTCCACAATTTCA
GTTTTAATAGCACAAATTGTATTGTAAAT	AACACATTCAGGCACTCAATGACTATCTTAGCTGGC
	AACACATTCAGGCACTCAATGACTATCTTAGCTGGC
GTTTTAATAGCACAAATTGTATTGTAAAT	TCGTATATTATATGAGGATTATAATACTTGTCAGCT
	TCGTATATTATATGAGGATTATAATACTTGTCAGCT
GTTTTAATAGCACAAATTGTATTGTAAAT	GCTTTTCAACCCATTTAATATCCGTTTTAATGTTGT
	GCTTTTCAACCCATTTAATATCC
GTTTTAATGTTGTGTTTTAATAGCACAAATTGTATTGTAAAT	CATCTTAAAGCTGTATTTAATACCACTGACAAGGAA
GTTTTAATAGCACAAATTGTATTGTAAAT	CTCCTCTTTGCCAATGTTGTTTTTAATTTGCACTCG
GTTTTAATAGCACAAATTGTATTGTAAAT	GATTAGTAAATACATAATGCAATAAGTCTAAATCAT
GTTTTAATAGCACAAATTGTATTGTAAAT	AATCACTTTGTATGCTTGACTTAAACTTACTTCCAA
GTTTTAATAGCACAAATTGTATTGTAAAT	TTGCGTCTTCGATATAATCGAGAACGATTCTTTCAA
GTTTTAATAGCACAAATTGTATTGTAAAT	GCTTTCTTGATATTATTATACTATACTTTTTATCAAAA
GTTTTAATAGCACAAATTGTATTGTAAAT	GCCTGTTAAGGACTTCAACAAGTTTTTCGTTTTGTG
GTTTTAATAGCACAAATTGTATTGTAAAT	TTGTGAATATTTACTATTTGTTTCTCAACTTTAAAT
GTTTTAATAGCACAAATTGTATTGTAAAT	TCCGCCGCCGGACCGTAAATAATCGTATTATTGCT
GTTTTAATAGCACAAATTGTATTGTAAAT	AATTGTATTATATGGAATGTTGGGACTGGCTGGTAAA
GTTTTAATAGCACAAATTGTATTGTAAAT	GTGTAAACGGAGATTACAACAACATTATTAGAAAAC
GTTTTAATAGCACAAATTGTATTGTAAAT	ATAATACCATTAAAGGCTTTATTTTTGAGTTTAATT
GTTTTAATAGCACAAATTGTATTGTAAAT	TTGTATTGTTTGTGTCAAATTCTCCTAGAAGTGTAC
GTTTTAATAGCACAAATTGTATTGTAAAT	ACAGGTATGGCACGTTCGGTTAGGTCTAATTAAATC
GTTTTAATAGCACAAATTGTATTGTAAAT	TTTTCTCTAATTCTTTAATTTTTGAATACAAACT
GTTTTAATAGCACAAATTGTATTGTAAAT	TTCTTTATCTGAGCCTAAAATATCATCTAAAATTCT
GTTTTAATAGCACAAATTGTATTGTAAAT	CAAAATTATTGGACTTTGGTAACTTTGATACAATT
GTTTTAATAGCACAAATTGTATTGTAAAT	TATATTGCCTTGTACTTGCCTTTACATATTGGTATC
GTTTTAATAGCACAAATTGTATTGTAAAT	TAAAAATTGATAAAACTTGTTAATTAATACTTATTT
GTTTTAATAGCACAAATTGTATTGTAAAT	GTTTTTAATGGAAAAAATGCAATAGATATTATGGA
GTTTTAATAGCACAAATTGTATTGTAAAT	TTATTCAACATCTCCTTATAGTTTTTATTAATTTTT
GTTTTAATAGCACAAATTGTATTGTAAAT	TTAGTAAATACTTGTTGGGAAACAGAGAAATTATA
GTTTTAATAGCACAAATTGTATTGTAAAT	GATGTAAAAGACGAAGAAGGGAATATTAATCTTAAA
GTTTTAATAGCACAAATTGTATTGTAAAT	GAAAAAGGACTTAAAAGATTTCGAGCAAGAAGAAAA
GTTTTAATAGCACAAATTGTATTGTAAAT	ACTTTTGAGGAAACTGCTGAACACATCTTGAAAGAT
GTTTTAATAGCACAAATTGTATTGTAAAT	AGTTATATCGCCAAAAACCTTTTTCAGCCTTCTGTA
GTTTTAATAGCACAAATTGTATTGTAAAT	CTTGTTGTGCTTTAAATTTAGTTAGTTTTGCCATCT
GTTTTAATAGCACAAATTGTATTGTAAAT	GCTTACACATTTGCTCAAGGAATTAATGGACGTTGG
GTTTTAATAGCACAAATTGTATTGTAAAT	TTCCCGCCCGCAGCCCTTCAGTTGTGCCAAGTGTG
GTTTTAATAGCACAAATTGTATTGTAAAT	TCAACTCCCCTTATTTTCTACCAGTACCTTTAAAAA
GTTTTAATAGCACAAATTGTATTGTAAAT	ATTCATTTATATAATCATATTCTTTTAATTTCTTTA
GTTTTAATAGCACAAATTGTATTGTAAAT	ATACAAATTGTCTCTTTCCAAAAGTTATTAAATATT
GTTTTAATAGCACAAATTGTATTGTAAAT	TTAAATCAATGATAAATTATTTTCATATCTGAACTT
GTTTTAATAGCACAAATTGTATTGTAAAT	TAGTGTTAGAGGAATTAACACAATTAAAGATTAATT
GTTTTAATAGCACAAATTGTATTGTAAAT	ATCAAAAAATAAGTATATTAATGATGATAATAATAT
GTTTTAATAGCACAAATTGTATTGTAAAT	TTTTCACTTTCTCGTTGTTGCTGTTTACTAATGTT
GTTTTAATAGCACAAATTGTATTGTAAAT	CGAATTCTTCCATATCTGAAAATTTGCCTTTTTTA
GTTTTAATAGCACAAATTGTATTGTAAAT	TGCGGAATTGGCTTTTATTTAATTGAATGTTATTGT
GTTTTAATAGCACAAATTGTATTGTAAAT	TTCAATACTATATTCTCTAATACTGGAATATCTTT
GTTTTAATAGCACAAATTGTATTGTAAAT	AAAGGTTTCTAAAAACAATATCGGCGATTTCTGACAA
GTTTTAATAGCACAAATTGTATTGTAAAT	ATACAAATAGAAGTAGTTGCTAACAATAACAATAA
GTTTTAATAGCACAAATTGTATTGTAAAT	TTTCTTCCGCAAATTGCACAAGTTCTTGACTTTAA
GTTTTAATAGCACAAATTGTATTGTAAAT	TGATATTAAGAGAAAAGATTTGGAAGATGCTTTATT
GTTTTAATAGCACAAATTGTATTGTAAAT	ATTCACAATCATACACTCCATTAAACGTTGTAGTG
GTTTTAATAGCACAAATTGTATTGTAAAT	GTTGCAGGACTGTTTATGGGAATTGCTGAAGCAAT
GTTTTAATAGCACAAATTGTATTGTAAAT	ACAGTATCTTGTACTAATCTGTACTCTGAACTTTC
GTTTTAATAGCACAAATTGTATTGTAAAT	TATGTTTACCGATTTCCCTTTTGACGCTTTTATAAG
GTTTTAATAGCACAAATTGTATTGTAAAT	CAATTTCGTGCAGTAAGTCATCTTCTTTCTTTTCAT
GTTTTAATAGCACAAATTGTATTGTAAAT	TCAAATTTTTGTTCTTTACGATGCAGATTGTTTTGT
GTTTTAATAGCACAAATTGTATTGTAAAT	TGATATTAAGGAGGTGTAGATAATAATTGAGTAGTA
GTTTTAATAGCACAAATTGTATTGTAAAT	ATAATGGTAATTGGGACTTTTGCGGGCGTGGCCTTG
GTTTTAATAGCACAAATTGTATTGTAAAT	TTACTCAATCATATAATTTAAATGATAATATGTTTG
GTTTTAATAGCACAAATTGTATTGTAAAT	AATTATGAAATATGGAAAGGGTATGTTTTTTCAAAA
GTTTTAATAGCACAAATTGTATTGTAAAT	TTATCTTTGTATGTTTTTACATCACAATAAAAATAA
GTTTTAATAGCACAAATTGTATTGTAAAT	ACAATCATCTGTAGGAGTGTGATTTATGGACATAAA
GTTTTAATAGCACAAATTGTATTGTAAAT	AATTTTGATAGCTTTTCTTCTATTTTTGAAGCGGCT
GTTTTAATAGCACAAATTGTATTGTAAAT	TAAAAATTTATTTCTTAAATAATTTCTTAATTCTG
GTTTTAATAGCACAAATTGTATTGTAAAT	GTTGGGAGGACGAATAATGAGAGAAATAAAATTTAG
GTTTTAATAGCACAAATTGTATTGTAAAT	TTTGTCTATAAGGAAAATATGGATATTTTTGAACTGG
GTTTTAATAGCACAAATTGTATTGTAAAT	GTTACAGTTCCTCATATTCTTTCAGGTTTTCCAGTAT
GTTTTAATAGCACAAATTGTATTGTAAAT	AATAACCGTATTCGTCAGTTTTAAGATTATGTTCAT
GTTTTAATAGCACAAATTGTATTGTAAAT	CAATTCTGCTTTTTCTATCCAGTTCTGAACATACAGT
GTTTTAATAGCACAAATTGTATTGTAAAT	TATAAACTGGCAATTGAAAAATCGTATTCGGGATGT
GTTTTAATAGCACAAATTGTATTGTAAAT	TATCTTCCTTAGTTATTTGATAATACTTTTTCCAA
GTTTTAATAGCACAAATTGTATTGTAAAT	CTTTGTGGTTGTTTTCAAAGATAAGTTCCTTTGCCT
GTTTTAATAGCACAAATTGTATTGTAAAT	AGAAGATTTTATGTATGTAAGAAATGGTAAACAAGT
GTTTTAATAGCACAAATTGTATTGTAAAT	GGAGAATTGAAGAGCCTTTAAAAATTCTGAAGGTAC
GTTTTAATAGCACAAATTGTATTGTAAAT	TGTCTAGTGAGCGGAAGACGACCCTTGAAACGAAG
GTTTTAATAGCACAAATTGTATTGTAAAT	CATCTTCGGTGAAAGCAAATTTTTCTTGTAACTGAC
GTTTTAATAGCACAAATTGTATTGTAAAT	CGTCTAGTGTAGCAGTTCTTAGCCCACTGCGCAAG
GTTTTAATAGCACAAATTGTATTGTAAAT	CCTTTTGAGTTATAATAATATCGCCAAATAAAATC
GTTTTAATAGCACAAATTGTATTGTAAAT	TTTTTATCACATAATTCTAATGAATAATTATCAAA
GTTTTAATAGCACAAATTGTATTGTAAAT	CAAAACAAGGAGCGATAGTTTCGACTATTTTTGGAG
GTTTTAATAGCACAAATTGTATTGTAAAT	TTCTGTACATTTGCTATTTTATTCCAGCCCATAAAA


>CP001685|2|2|879301-884706|CRT
GTTTTAATAGCACAAATTGTATTGTAAAT	TATTAGAAACCTTGTTTTTAATAACAGGATTTTTT
	TATTAGAAACCTTGTTTTTAATAACAGGATTTTTT
GTTTTAATAGCACAAATTGTATTGTAAAT	CTCCCTACATCTTGTATTTTTAACACTCTTGTGCTA
	CTCCCTACATCTTGTATTTTTAACACTCTTGTGCTA
GTTTTAATAGCACAAATTGTATTGTAAAT	GCAAATGAAACTTTTAGTTGTGGATTGAAACATCC
	GCAAATGAAACTTTTAGTTGTGGATTGAAACATCC
GTTTTAATAGCACAAATTGTATTGTAAAT	GGAATAAAAGAAAAATTGGAGGAATACTTAAACCAC
	GGAATAAAAGAAAAATTGGAGGAATACTTAAACCAC
GTTTTAATAGCACAAATTGTATTGTAAAT	GATGCTTTTAGTGCTTCTGCGAAAGTTTCAAAACT
	GATGCTTTTAGTGCTTCTGCGAAAGTTTCAAAACT
GTTTTAATAGCACAAATTGTATTGTAAAT	CAAGTATCTACCATCTGCATCTTTCCACAATTTCA
	CAAGTATCTACCATCTGCATCTTTCCACAATTTCA
GTTTTAATAGCACAAATTGTATTGTAAAT	AACACATTCAGGCACTCAATGACTATCTTAGCTGGC
	AACACATTCAGGCACTCAATGACTATCTTAGCTGGC
GTTTTAATAGCACAAATTGTATTGTAAAT	TCGTATATTATATGAGGATTATAATACTTGTCAGCT
	TCGTATATTATATGAGGATTATAATACTTGTCAGCT
GTTTTAATAGCACAAATTGTATTGTAAAT	GCTTTTCAACCCATTTAATATCCGTTTTAATGTTGT
	GCTTTTCAACCCATTTAATATCC
GTTTTAATGTTGTGTTTTAATAGCACAAATTGTATTGTAAAT	CATCTTAAAGCTGTATTTAATACCACTGACAAGGAA
GTTTTAATAGCACAAATTGTATTGTAAAT	CTCCTCTTTGCCAATGTTGTTTTTAATTTGCACTCG
GTTTTAATAGCACAAATTGTATTGTAAAT	GATTAGTAAATACATAATGCAATAAGTCTAAATCAT
GTTTTAATAGCACAAATTGTATTGTAAAT	AATCACTTTGTATGCTTGACTTAAACTTACTTCCAA
GTTTTAATAGCACAAATTGTATTGTAAAT	TTGCGTCTTCGATATAATCGAGAACGATTCTTTCAA
GTTTTAATAGCACAAATTGTATTGTAAAT	GCTTTCTTGATATTATTATACTATACTTTTTATCAAAA
GTTTTAATAGCACAAATTGTATTGTAAAT	GCCTGTTAAGGACTTCAACAAGTTTTTCGTTTTGTG
GTTTTAATAGCACAAATTGTATTGTAAAT	TTGTGAATATTTACTATTTGTTTCTCAACTTTAAAT
GTTTTAATAGCACAAATTGTATTGTAAAT	TCCGCCGCCGGACCGTAAATAATCGTATTATTGCT
GTTTTAATAGCACAAATTGTATTGTAAAT	AATTGTATTATATGGAATGTTGGGACTGGCTGGTAAA
GTTTTAATAGCACAAATTGTATTGTAAAT	GTGTAAACGGAGATTACAACAACATTATTAGAAAAC
GTTTTAATAGCACAAATTGTATTGTAAAT	ATAATACCATTAAAGGCTTTATTTTTGAGTTTAATT
GTTTTAATAGCACAAATTGTATTGTAAAT	TTGTATTGTTTGTGTCAAATTCTCCTAGAAGTGTAC
GTTTTAATAGCACAAATTGTATTGTAAAT	ACAGGTATGGCACGTTCGGTTAGGTCTAATTAAATC
GTTTTAATAGCACAAATTGTATTGTAAAT	TTTTCTCTAATTCTTTAATTTTTGAATACAAACT
GTTTTAATAGCACAAATTGTATTGTAAAT	TTCTTTATCTGAGCCTAAAATATCATCTAAAATTCT
GTTTTAATAGCACAAATTGTATTGTAAAT	CAAAATTATTGGACTTTGGTAACTTTGATACAATT
GTTTTAATAGCACAAATTGTATTGTAAAT	TATATTGCCTTGTACTTGCCTTTACATATTGGTATC
GTTTTAATAGCACAAATTGTATTGTAAAT	TAAAAATTGATAAAACTTGTTAATTAATACTTATTT
GTTTTAATAGCACAAATTGTATTGTAAAT	GTTTTTAATGGAAAAAATGCAATAGATATTATGGA
GTTTTAATAGCACAAATTGTATTGTAAAT	TTATTCAACATCTCCTTATAGTTTTTATTAATTTTT
GTTTTAATAGCACAAATTGTATTGTAAAT	TTAGTAAATACTTGTTGGGAAACAGAGAAATTATA
GTTTTAATAGCACAAATTGTATTGTAAAT	GATGTAAAAGACGAAGAAGGGAATATTAATCTTAAA
GTTTTAATAGCACAAATTGTATTGTAAAT	GAAAAAGGACTTAAAAGATTTCGAGCAAGAAGAAAA
GTTTTAATAGCACAAATTGTATTGTAAAT	ACTTTTGAGGAAACTGCTGAACACATCTTGAAAGAT
GTTTTAATAGCACAAATTGTATTGTAAAT	AGTTATATCGCCAAAAACCTTTTTCAGCCTTCTGTA
GTTTTAATAGCACAAATTGTATTGTAAAT	CTTGTTGTGCTTTAAATTTAGTTAGTTTTGCCATCT
GTTTTAATAGCACAAATTGTATTGTAAAT	GCTTACACATTTGCTCAAGGAATTAATGGACGTTGG
GTTTTAATAGCACAAATTGTATTGTAAAT	TTCCCGCCCGCAGCCCTTCAGTTGTGCCAAGTGTG
GTTTTAATAGCACAAATTGTATTGTAAAT	TCAACTCCCCTTATTTTCTACCAGTACCTTTAAAAA
GTTTTAATAGCACAAATTGTATTGTAAAT	ATTCATTTATATAATCATATTCTTTTAATTTCTTTA
GTTTTAATAGCACAAATTGTATTGTAAAT	ATACAAATTGTCTCTTTCCAAAAGTTATTAAATATT
GTTTTAATAGCACAAATTGTATTGTAAAT	TTAAATCAATGATAAATTATTTTCATATCTGAACTT
GTTTTAATAGCACAAATTGTATTGTAAAT	TAGTGTTAGAGGAATTAACACAATTAAAGATTAATT
GTTTTAATAGCACAAATTGTATTGTAAAT	ATCAAAAAATAAGTATATTAATGATGATAATAATAT
GTTTTAATAGCACAAATTGTATTGTAAAT	TTTTCACTTTCTCGTTGTTGCTGTTTACTAATGTT
GTTTTAATAGCACAAATTGTATTGTAAAT	CGAATTCTTCCATATCTGAAAATTTGCCTTTTTTA
GTTTTAATAGCACAAATTGTATTGTAAAT	TGCGGAATTGGCTTTTATTTAATTGAATGTTATTGT
GTTTTAATAGCACAAATTGTATTGTAAAT	TTCAATACTATATTCTCTAATACTGGAATATCTTT
GTTTTAATAGCACAAATTGTATTGTAAAT	AAAGGTTTCTAAAAACAATATCGGCGATTTCTGACAA
GTTTTAATAGCACAAATTGTATTGTAAAT	ATACAAATAGAAGTAGTTGCTAACAATAACAATAA
GTTTTAATAGCACAAATTGTATTGTAAAT	TTTCTTCCGCAAATTGCACAAGTTCTTGACTTTAA
GTTTTAATAGCACAAATTGTATTGTAAAT	TGATATTAAGAGAAAAGATTTGGAAGATGCTTTATT
GTTTTAATAGCACAAATTGTATTGTAAAT	ATTCACAATCATACACTCCATTAAACGTTGTAGTG
GTTTTAATAGCACAAATTGTATTGTAAAT	GTTGCAGGACTGTTTATGGGAATTGCTGAAGCAAT
GTTTTAATAGCACAAATTGTATTGTAAAT	ACAGTATCTTGTACTAATCTGTACTCTGAACTTTC
GTTTTAATAGCACAAATTGTATTGTAAAT	TATGTTTACCGATTTCCCTTTTGACGCTTTTATAAG
GTTTTAATAGCACAAATTGTATTGTAAAT	CAATTTCGTGCAGTAAGTCATCTTCTTTCTTTTCAT
GTTTTAATAGCACAAATTGTATTGTAAAT	TCAAATTTTTGTTCTTTACGATGCAGATTGTTTTGT
GTTTTAATAGCACAAATTGTATTGTAAAT	TGATATTAAGGAGGTGTAGATAATAATTGAGTAGTA
GTTTTAATAGCACAAATTGTATTGTAAAT	ATAATGGTAATTGGGACTTTTGCGGGCGTGGCCTTG
GTTTTAATAGCACAAATTGTATTGTAAAT	TTACTCAATCATATAATTTAAATGATAATATGTTTG
GTTTTAATAGCACAAATTGTATTGTAAAT	AATTATGAAATATGGAAAGGGTATGTTTTTTCAAAA
GTTTTAATAGCACAAATTGTATTGTAAAT	TTATCTTTGTATGTTTTTACATCACAATAAAAATAA
GTTTTAATAGCACAAATTGTATTGTAAAT	ACAATCATCTGTAGGAGTGTGATTTATGGACATAAA
GTTTTAATAGCACAAATTGTATTGTAAAT	AATTTTGATAGCTTTTCTTCTATTTTTGAAGCGGCT
GTTTTAATAGCACAAATTGTATTGTAAAT	TAAAAATTTATTTCTTAAATAATTTCTTAATTCTG
GTTTTAATAGCACAAATTGTATTGTAAAT	GTTGGGAGGACGAATAATGAGAGAAATAAAATTTAG
GTTTTAATAGCACAAATTGTATTGTAAAT	TTTGTCTATAAGGAAAATATGGATATTTTTGAACTGG
GTTTTAATAGCACAAATTGTATTGTAAAT	GTTACAGTTCCTCATATTCTTTCAGGTTTTCCAGTAT
GTTTTAATAGCACAAATTGTATTGTAAAT	AATAACCGTATTCGTCAGTTTTAAGATTATGTTCAT
GTTTTAATAGCACAAATTGTATTGTAAAT	CAATTCTGCTTTTTCTATCCAGTTCTGAACATACAGT
GTTTTAATAGCACAAATTGTATTGTAAAT	TATAAACTGGCAATTGAAAAATCGTATTCGGGATGT
GTTTTAATAGCACAAATTGTATTGTAAAT	TATCTTCCTTAGTTATTTGATAATACTTTTTCCAA
GTTTTAATAGCACAAATTGTATTGTAAAT	CTTTGTGGTTGTTTTCAAAGATAAGTTCCTTTGCCT
GTTTTAATAGCACAAATTGTATTGTAAAT	AGAAGATTTTATGTATGTAAGAAATGGTAAACAAGT
GTTTTAATAGCACAAATTGTATTGTAAAT	GGAGAATTGAAGAGCCTTTAAAAATTCTGAAGGTAC
GTTTTAATAGCACAAATTGTATTGTAAAT	TGTCTAGTGAGCGGAAGACGACCCTTGAAACGAAG
GTTTTAATAGCACAAATTGTATTGTAAAT	CATCTTCGGTGAAAGCAAATTTTTCTTGTAACTGAC
GTTTTAATAGCACAAATTGTATTGTAAAT	CGTCTAGTGTAGCAGTTCTTAGCCCACTGCGCAAG
GTTTTAATAGCACAAATTGTATTGTAAAT	CCTTTTGAGTTATAATAATATCGCCAAATAAAATC
GTTTTAATAGCACAAATTGTATTGTAAAT	TTTTTATCACATAATTCTAATGAATAATTATCAAA
GTTTTAATAGCACAAATTGTATTGTAAAT	CAAAACAAGGAGCGATAGTTTCGACTATTTTTGGAG
GTTTTAATAGCACAAATTGTATTGTAAAT	TTCTGTACATTTGCTATTTTATTCCAGCCCATAAAA
GTTTTAATAGCACAAATTGTATTGTAAAT

Protein	Signature genes	Signature genes Name	Protein_function
CP001685.1\|ACV38708.1\|878208_878991_-\|CRISPR-associated-protein-Cas6	cas6	pfam01881_cas6_CAS-I:CAS-III	gnl\|CDD\|273848
CP001685.1\|ACV38705.1\|874748_875513_-\|CRISPR-associated-protein-Cas5	cas5	cd09658_cas5_CAS-I-B	gnl\|CDD\|187789
CP001685.1\|ACV38709.1\|884909_885638_+\|HAD-superfamily-subfamily-IB-hydrolase,-TIGR01490	unknown	unknown	gnl\|CDD\|273654
CP001685.1\|ACV38718.1\|894184_894922_+\|polar-amino-acid-ABC-transporter,-inner-membrane-subunit	unknown	unknown	gnl\|CDD\|223836
CP001685.1\|ACV38704.1\|872314_874729_-\|CRISPR-associated-helicase-Cas3	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|273707
CP001685.1\|ACV38699.1\|867102_867501_+\|hypothetical-protein	unknown	unknown	unknown
CP001685.1\|ACV38714.1\|891948_892719_+\|AzlC-family-protein	unknown	unknown	gnl\|CDD\|377070
CP001685.1\|ACV38703.1\|871807_872296_-\|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl\|CDD\|366863
CP001685.1\|ACV38706.1\|875515_876412_-\|CRISPR-associated-autoregulator,-DevR-family	cas7	cd09687_cas7_CAS-I-B	gnl\|CDD\|274215
CP001685.1\|ACV38710.1\|885937_886918_+\|D-isomer-specific-2-hydroxyacid-dehydrogenase-NAD-binding	unknown	unknown	gnl\|CDD\|240639
CP001685.1\|ACV38700.1\|867562_870223_+\|preprotein-translocase,-SecA-subunit	unknown	unknown	gnl\|CDD\|237259
CP001685.1\|ACV38701.1\|870499_870778_-\|CRISPR-associated-protein-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
CP001685.1\|ACV38711.1\|887025_887670_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|370129
CP001685.1\|ACV38707.1\|876414_878184_-\|CRISPR-associated-Cst1-family-protein	cas8b2	cd09665_cas8b2_CAS-I-B	gnl\|CDD\|187884
CP001685.1\|ACV38715.1\|892741_893047_+\|branched-chain-amino-acid-transport	unknown	unknown	gnl\|CDD\|377512
CP001685.1\|ACV38702.1\|870779_871772_-\|CRISPR-associated-protein-Cas1	cas1	cd09722_cas1_CAS-I-B	gnl\|CDD\|187853
CP001685.1\|ACV38717.1\|893471_893981_-\|conserved-hypothetical-protein	unknown	unknown	unknown
CP001685.1\|ACV38716.1\|893107_893455_+\|inorganic-pyrophosphatase	unknown	unknown	gnl\|CDD\|223299
CP001685.1\|ACV38713.1\|888707_891848_+\|DNA-polymerase-I	unknown	unknown	gnl\|CDD\|235591
CP001685.1\|ACV38712.1\|887803_888241_+\|conserved-hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP001685.1\|ACV38708.1\|878208_878991_-\|CRISPR-associated-protein-Cas6	gnl\|CDD\|273848	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This broadly distributed, highly divergent Cas family is now characterized as an endoribonuclease that generates guide RNAs for host defense against phage and other invaders. The family contains a C-terminal motif GXGXXXXXGXG, where the each X between two Gly is hydrophobic and the spacer XXXXX contains (usually) one Arg or Lys. The seed alignment for the current version of this model has gappy columns removed. Members of this protein family are found associated with several different CRISPR/cas system subtypes, and consequently we designate this family Cas6.	3.35807e-17
CP001685.1\|ACV38705.1\|874748_875513_-\|CRISPR-associated-protein-Cas5	gnl\|CDD\|187789	cd09658, Cas5_I-B, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	1.31908e-20
CP001685.1\|ACV38709.1\|884909_885638_+\|HAD-superfamily-subfamily-IB-hydrolase,-TIGR01490	gnl\|CDD\|273654	TIGR01490, Uncharacterized_protein_Rv3661/MT3761, HAD-superfamily subfamily IB hydrolase, TIGR01490. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled here are all bacterial. The IB subfamily includes the enzyme phosphoserine phosphatase (TIGR00338). Due to this relationship, several of these sequences have been annotated as "phosphoserine phosphatase related proteins," or "Phosphoserine phosphatase-family enzymes." There is presently no evidence that any of the enzymes in this model possess PSPase activity. OMNI\|NTL01ML1250 is annotated as a "possible transferase," however this is due to the C-terminal domain found on this sequence which is homologous to a group of glycerol-phosphate acyltransferases (between trusted and noise to TIGR00530). A subset of these sequences including OMNI\|CC1962, the Caulobacter crescentus CicA protein cluster together and may represent a separate equivalog. [Unknown function, Enzymes of unknown specificity].	1.16994e-51
CP001685.1\|ACV38704.1\|872314_874729_-\|CRISPR-associated-helicase-Cas3	gnl\|CDD\|273707	TIGR01587, CRISPR-associated_endonuclease/helicase_Cas3, CRISPR-associated helicase Cas3. This model represents the highly conserved core region of an alignment of Cas3, a protein found in association with CRISPR repeat elements in a broad range of bacteria and archaea. Cas3 appears to be a helicase, with regions found by pfam00270 (DEAD/DEAH box helicase) and pfam00271 (Helicase conserved C-terminal domain). Some but not all members have an N-terminal HD domain region (pfam01966) that is not included within this model.	4.96862e-58
CP001685.1\|ACV38714.1\|891948_892719_+\|AzlC-family-protein	gnl\|CDD\|377070	pfam03591, AzlC, AzlC protein.	8.81653e-21
CP001685.1\|ACV38703.1\|871807_872296_-\|CRISPR-associated-protein-Cas4	gnl\|CDD\|366863	pfam01930, Cas_Cas4, Domain of unknown function DUF83. This domain has no known function. The domain contains three conserved cysteines at its C-terminus.	7.19959e-57
CP001685.1\|ACV38706.1\|875515_876412_-\|CRISPR-associated-autoregulator,-DevR-family	gnl\|CDD\|274215	TIGR02585, conserved_protein, CRISPR-associated protein Cas7/Cst2/DevR, subtype I-B/TNEAP. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. This clade is a member of the DevR family (TIGR01875) and includes the DevR protein of Myxococcus xanthus, a protein whose expression appears to be regulated through a number of means, including both location and autorepression; DevR mutants are incapable of fruiting body development.	3.44567e-57
CP001685.1\|ACV38710.1\|885937_886918_+\|D-isomer-specific-2-hydroxyacid-dehydrogenase-NAD-binding	gnl\|CDD\|240639	cd12162, 2-Hacid_dh_4, Putative D-isomer specific 2-hydroxyacid dehydrogenases. 2-Hydroxyacid dehydrogenases catalyze the conversion of a wide variety of D-2-hydroxy acids to their corresponding keto acids. The general mechanism is (R)-lactate + acceptor to pyruvate + reduced acceptor. Formate/glycerate and related dehydrogenases of the D-specific 2-hydroxyacid dehydrogenase superfamily include groups such as formate dehydrogenase, glycerate dehydrogenase, L-alanine dehydrogenase, and S-adenosylhomocysteine hydrolase. Despite often low sequence identity, these proteins typically have a characteristic arrangement of 2 similar subdomains of the alpha/beta Rossmann fold NAD+ binding form. The NAD+ binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain, which has a similar domain structure to the internal NAD binding domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD is bound, primarily to the C-terminal portion of the 2nd (internal) domain. Some related proteins have similar structural subdomain but with a tandem arrangement of the catalytic and NAD-binding subdomains in the linear sequence. While many members of this family are dimeric, alanine DH is hexameric and phosphoglycerate DH is tetrameric.	1.20319e-116
CP001685.1\|ACV38700.1\|867562_870223_+\|preprotein-translocase,-SecA-subunit	gnl\|CDD\|237259	PRK12904, PRK12904, preprotein translocase subunit SecA; Reviewed.	0
CP001685.1\|ACV38701.1\|870499_870778_-\|CRISPR-associated-protein-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	4.59801e-26
CP001685.1\|ACV38711.1\|887025_887670_+\|hypothetical-protein	gnl\|CDD\|370129	pfam08797, HIRAN, HIRAN domain. The HIRAN domain (HIP116, Rad5p N-terminal) is found in the N-terminal regions of the SWI2/SNF2 proteins typified by HIP116 and Rad5p. The HIRAN domain is found as a standalone protein in several bacteria and prophages, or fused to other catalytic domains, such as a nuclease of the restriction endonuclease fold and TDP1-like DNA phosphoesterases, in the eukaryotes. It has been predicted that this domain functions as a DNA-binding domain that probably recognizes features associated with damaged DNA or stalled replication forks.	3.29926e-06
CP001685.1\|ACV38707.1\|876414_878184_-\|CRISPR-associated-Cst1-family-protein	gnl\|CDD\|187884	cd09754, Cas8a1_I-A, CRISPR/Cas system-associated protein Cas8a1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins, some contain Zn-finger domain; signature gene for I-A subtype; also known as CXXC_CXXC family.	2.11544e-13
CP001685.1\|ACV38715.1\|892741_893047_+\|branched-chain-amino-acid-transport	gnl\|CDD\|377512	pfam05437, AzlD, Branched-chain amino acid transport protein (AzlD). This family consists of a number of bacterial and archaeal branched-chain amino acid transport proteins. AzlD is known to be involved in conferring resistance to 4-azaleucine although its exact role is uncertain.	0.00149325
CP001685.1\|ACV38702.1\|870779_871772_-\|CRISPR-associated-protein-Cas1	gnl\|CDD\|187853	cd09722, Cas1_I-B, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer integration; Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	1.94647e-161
CP001685.1\|ACV38716.1\|893107_893455_+\|inorganic-pyrophosphatase	gnl\|CDD\|223299	COG0221, Ppa, Inorganic pyrophosphatase [Energy production and conversion].	2.06376e-22
CP001685.1\|ACV38718.1\|894184_894922_+\|polar-amino-acid-ABC-transporter,-inner-membrane-subunit	gnl\|CDD\|223836	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism].	8.17076e-58
CP001685.1\|ACV38713.1\|888707_891848_+\|DNA-polymerase-I	gnl\|CDD\|235591	PRK05755, PRK05755, DNA polymerase I; Provisional.	0

>CP001685.1|ACV38708.1|878208_878991_-|CRISPR-associated-protein-Cas6
MRFKINIELIKGNSFPVNWRSKILRILKKGLKQCDLDIFEDFFGTAKQKNYTWAVYFQNVKFEKNEIRFLGDEKKATINFSAYDNVDSLNIYNAFSSLRFKEIEISEETKVVVTNISILPRKIIKDNVLIVKTMSPIVCRDHNQETKKDAYYIGTDDKFTEIIKRNLYTRLKELKGEYVKKDIEDLIIDSSQTKKIVVKHYDKTKKDKTLNYENKFNGKFLDTSVGILKLEGKSYILDYIYNAGLGSITGSGFGMLEKLK
>CP001685.1|ACV38707.1|876414_878184_-|CRISPR-associated-Cst1-family-protein
MSDEKIELKLKDWLFNAGLLGFINILGEEARNNGELEIDDKNRLIRFSPKVLENFEYKYFDFFIKRYGKTLTYGKILEFEKYIDEFEENGEKIRSINELKMINDKITFFKAKIKSASYKKAYDFIEKDGTNKILGLEKELKKIKEPKENIDEISKDDVKNNIKIMKEIIDFFKKKITDKNGNVKNYLAAKNIAYVIINNAWSSVSFLNRANAAKDIYEEHKSYFVEPALEYVNADKSKFKYKCVLSNMLMKDYKNTLGFLNDTGFDVNRKPSHVWNFVNDIAVTPLVTLVYSCVPAGFIYGADKGIFVNANHNIDQLCKINNGIAYNILEDESEEKNINLYKNLLKEIKKEKDNTKYELSDIQIVKFEEGHYKFTLLSRNILKLLSENKEKLDALLDKWYLIDRRYFYLYDTTITELLNNQNLFSLINKLCYYKISKTKLSCKLKNIEDLLKINLDYIRRLKKMDKQEIIEKKENKKTSEELTEKDIFYIRRDAMIFREEYIRKSGNDKKIGSLLYRLQNALRINNVDMFMDALISAHAYAGKNISSLFAKALLNDENFQTLGHGFLLGLLGEDKSKNENKTDKKEGNE
>CP001685.1|ACV38706.1|875515_876412_-|CRISPR-associated-autoregulator,-DevR-family
MNKKGLTFTAIFLAQSANYGEGIGNVAALKKLSRNKGEQYTYISRQAIRYNIIEQLGEEKSPVKAEGSGDKKIVQFSADTTIKDYPELDFFGYMKTIKGENSKNRSAIVRLSNAISLETFKGDLEFLTNKGLADRIGEFPNIAQAEIHKSYYKYTVTIDLDRIGIDELDEIEVSNEEKSRRVKKLLDTISLLYRDIKGRREDLKPLFIIGGVYDIKNPFFENIVDVKNNKILADKLCSGIYDYIEEDTISGIVKEQFENDTEVEEKLKGKNINVLDVPEFFKQLKEKVDNYYTEKVDG
>CP001685.1|ACV38705.1|874748_875513_-|CRISPR-associated-protein-Cas5
MKAIKLKLYQNMVNYKVPTSFQLKESYPLPPYSTVIGMVHSLCDFKEYKPMKISISGNYFSKVNDLYTRYEFKNGNPFEMGRHQLNVNGYGINRGVATAELLVDVNLTIHIIPEDQSEEFLNTIFEAFKYPREYPSLGRREDIVLIKDVRIVDVEKKEMEEDLENGEEVFAYIPLSFVYDEKVEFGNPASGVRICGTRYELTKNYETKNIGTKAKPKFIREWKKEEVLYSSNITALEEEIVPVDEDNEIVFCEL
>CP001685.1|ACV38704.1|872314_874729_-|CRISPR-associated-helicase-Cas3
MKNEFLAKSNGETIMEHTENLINNFKNFFTIYSEINVDKELLLLACIYHDLGKINKKFQSKLSGQKQNGELPHGLLSTSFIDSKSLSENGFDKSDIKVLSYSVALHHERDISEIEEEDFSSEIELMNIEADYFLKYLEKLQNIYFDYVNKNIEENLKYSIFKIENEKVKLKKLSKKYYKLNGRIYSQDFILSEKETFETFQKYVMLKGLLNKIDYAASSYIPVEEKNDFLEEKMDDFLKNVLKKDNPKNDWNELQKFMIHNQNENVVVVAQTGYGKTEAGLLWIGNNKGFFTLPLRVAINSIFNRVKNQIVIEKLENRIGLLHSDFREIYIEDTKKKEKNNLEKMDNDDLFMYIDKTKQLSLPLTVCTIDQLFDFVFRAPGFELKVATLSYSKVVIDEIQMYSTDLLAYLIYGLKYITDFGGKFAIMTATLPGIIIDLLKKEEIEFVTTEPFINDKKRHNIKVLKDTINAEFIKENYKDNKILVVCNTVKKSKQMYENLKNLGIECKELNLLHSRFIKKDRAKKEKEISEFANPKRFKQSVKKERKSKNIFENGIWIGTQVVEASLDLDFDILITELSDLNGLFQRMGRCYRNREILDEKYNCYVFTEECSGIKGSKAVIDKEIHQKSKEALINIDGLLTEKEKLELIDKVYSTESLKDTEYYGKLVKNIYALKNYIVEYEKTKSEVQKIFRNIASRDIIPKIIYQENKEEIEKNIEILQKKTKGLNEKERKNLRSEKIEARREINQFKVAIPEYELDDISPEQVEKMEINDYETLIILDCDYSYEKGFEVKIKNRDFFEDNTF
>CP001685.1|ACV38703.1|871807_872296_-|CRISPR-associated-protein-Cas4
MKITGIMINYYFICKRKLWCQSKNINLEEENENVQLGKLIDENSYSSETKQIMIEETVNIDFIRKWQVVHEIKKSKAVEEAAIWQVKYYIYFLKQRGIKIEKGIIDYPVIRERKEIILTKEDENTLKEILIDIEKICKNEKAPPVINDKICKKCAYYEFCYI
>CP001685.1|ACV38702.1|870779_871772_-|CRISPR-associated-protein-Cas1
MAESYFIFSSGELKRKDNVIRITAPDGRFKDIKIEVTRDIYLFGEVSLNTKCLNYLAQNKIPVHIFNYYGFYTGTFYPKESNVSGKLFVKQVENYTDNAKRIELAQLIIDAASTNILRNLRYYQERGKDLESIITEIKALKKGIFRTNEINELMGIEGSIRRTYYTAWNTIVNQEIDFEKRVKRPPDNMINTMISFLNTLVYTACLSEIYVSQLNPTISYLHSVGERRFSLSLDIAEVFKPLLADRIIFSLLNKKMITEKDFVKDSNYFYMKENAQKLILKTFNERLETSIKHRDLNRKVSYRHLMRLEAYKLVKHLLEDKKYEGFKIWW
>CP001685.1|ACV38701.1|870499_870778_-|CRISPR-associated-protein-Cas2
MYIILVYDILTEDNGPKISRNVFKICKKYLTNVQKSVFEGEITPVLLKKLNLELKRHIRKDKDSLIIFKSRQEKWLEKEFWGIEDDKTSNFF
>CP001685.1|ACV38700.1|867562_870223_+|preprotein-translocase,-SecA-subunit
MLKKIGEKIFGTSDEREIKKMKKLVNKINEIEPLFEKMTDEELQHKTVEFKERLKKETLDDILVEAFATVRETSKRLMGMRHYDVQLIGGMILHKGSIAEMKTGEGKTLMATLPIYLNALTGKGVHVVTVNDYLAKRDRDIMAELFEFLGLTSGVIVGNITPEQRKASYNCDITYGTNNEFGFDYLRDNMVGELEDKVQRGHNYVIVDEIDSILIDEARTPLIISGAAEETTEWYNTFAEVAKRLKRSYKTEEIKDKKNTVIPDEDWEDYEVDEKSHTVTITDKGIKNVERILKIDNLYSPEYVELTHFLTQALKAKELFKLDRDYIINDENEVIIVDEFTGRLMDGRRYSDGLHQAIEAKEKLEVAGENQTLATITLQNYFRMYEKLSGMTGTAKTEEDEFKQIYSLKVIVVPTNKPVARVDLPDVIYMNKKAKYKAIARKIEELYQKGQPVLVGTASIQHSEEVSALLKKKKIPHEILNAKHHEREAEIIAQAGRYKTVTIATNMAGRGTDIKLGGDAESFAAKVAVKGTPEYDEVHKAYVKECEEDKKKVIAAGGLFILGTERHESRRIDNQLRGRAGRQGDPGTSEFYLSLDDDLMRLFGGDRLKTMMKMLKIDEDEEIRHKQISKSVENAQKRIESRNFSSRKSLIEYDDVNNTQREVVYEQRDAILKNENLKELITAMISDTVDDIVNSAYVGEGSGEKDFNLLSDKLQETFGYEISEGLENASAEDISNKVYDDLIKLYDEKEEAIGEEIFRRIERYIMLEVLDSKWRQHLKDLTELREGIRLRSYGQRNPIHDYKIVAYDIYNEMIDAIKRETSSFILKLRVRGEEDTNNLTHEEVSNVKYEHDENEMIGDDVSDRMPSEPQRPLSRRERRERERRNV
>CP001685.1|ACV38699.1|867102_867501_+|hypothetical-protein
MKKIVINKRKNVMLIMTCIVFMMTYSSLLGTPGFSYKLSVFVDENNLTHEDIKDLIVKINQIESQNNKKLTQELRKIGKRKEKQKNKEFLTSEKNQNIFLEKEKNIQKNSKNIGDIGIFLMKKSENNLRARE
>CP001685.1|ACV38709.1|884909_885638_+|HAD-superfamily-subfamily-IB-hydrolase,-TIGR01490
MKKNVAAFFDIDGTIYRDSLLIEHFKMLVQYEYIDMMTWEGKVKEKFSKWENRTGDYDDYLDELVQTYMEALKNFSKEDMDFIAKRVMKLKGDKVYRYTRERLKYHKERNHKVIIISGSPDFLVSKMAERYGVKDYRASTYEVNENGIFTGKVIPMWDAKSKQKAIADFCKMYKIDLTKSYAYGDTTGDLTMFKNVGKAIAINPAKKLLQKIKRDKELKEKVMIIVERKDVIYKLKADVDII
>CP001685.1|ACV38710.1|885937_886918_+|D-isomer-specific-2-hydroxyacid-dehydrogenase-NAD-binding
MDKNLKIVYLDRITAGPIDLKEKFSKYGKYIEYEDTDSSEIDERIKDVDVVITTRIKLGKKQFEKAEKLKLILITATGFNHIDVKSANEFGIKVANVSGYSTNSVAQLAITFLLNELTPVNKYYEEVKEGKWINVAVPEYQKYPIDDADGKILGIVGFGNIGKRVAQVAEILGMKVMVVKNNEKDYGKTNSVIEKDGILQYDLDEVLEKCDVLTLHVPLTDSTRNLINLEKMKKMKKSAVILNLARGPVINQEDLYFALKNKIIKSAAVDVTSVEPIEKNSKLFELDNILITPHIAWKSEKSMIKLMDDVEKNLKLFLEGKLEGLK
>CP001685.1|ACV38711.1|887025_887670_+|hypothetical-protein
MLINNFSGIKLEFDGLYYGGNYDIEIFPDGRFYYSYIENTSVELKKGSFQINQKEIMIFEEMMDYFELLKNQSNYMINEFNFGNGVLVIHKNNGREEKIQLGKEMMFEYAKTLIDKYTKKSKRLFLLDTYLEGAKYIRNFAIKIKDEVQLDLFREFNGISLNAVAVFNSNKEKVGYLPKNQSEIIARMIDAGKKFVAVPIPFDEEIALKIYLLD
>CP001685.1|ACV38712.1|887803_888241_+|conserved-hypothetical-protein
MGFRLSVKGQENEILLDKESILDVKYISETPDDSNARATDLGVILEIRGKILAAASGDTEDDTRKVAQWSLVPSEASDAYRQASLEIISAGQMVRKIDMTNVFVVDYIEEYGNQAGTGTFSLKIKQKKEKVKEVAIEGGYATQEA
>CP001685.1|ACV38713.1|888707_891848_+|DNA-polymerase-I
MKRAVILDTSAIMYRSHFALMGMRNSSGMSTGATFGFINTLESVIREFRPDYLVACLDVKRDELERTGELETYKAHRESMPEELVMQIDTIMKVLDGYRIPKYKKAGQEADDVIATFATKFSNDADEQIEVFVITGDKDLTQLVDGKINIALLGKGDKNSAFKHIKTDEDVVEYLGVTPDKIPDLFGLMGDKSDGIPGVAGIGPKNGVKLITTYGNLEGIYENIDEIKGKQKEKLLTDKENAFISRELATVKRELDVEYDKNKLKFEEKDFDSLLKLYEELNFKRFSKAVEEEKERFLQNGNQKELTEEEKLVLEKNKKITEEKLEKERFEREKIEKQELEYDKENPIFDGISHFYEHVEYEHNSEIDKKIDEIQVLKEELAIEYEAQKKKQEEIALENQKTEKTKKIKDEKVYFEKNYGKVVSWNDAYSVIEKMDKKVAIFENMLGLSICDEKMNIVLLDSELKNILQNKNYEKSGAEVQINLFSLGENTAEKEDNKKNIENIYKLLSEKEIIAYNVKEYMKSGESEYFGYSVGGKTYGINEERFGIKCTEYFDILLARYVLGTESLQEIEEIILDEFGVEIATFEEQFKKERRKKDFSDVSDDVVCEFLSKRTFFIYKLEIIFRNRLQNEQFLNIFDKLESRLIPVLAQMEETGIKIDKKYFSEFQNELEEKINMLQSDIYKLADGEFNIDSPQQLGEVLFEKLQIPSGKKTKTGYSTNVEVLEMIANNRELTEDKRMIGKKLLEYRAYKKLLSTYIEPIPKLADKEERIHTTFNQNGTSTGRLSSANPNLQNIPVRTDDGIRIRTGFVSKEGHSLISFDYSQIELRVLAELSKDRHLVQAYQDNQDLHNLTARKIFFKTEEDEISRHERSIAKVINFSILYGKTPFGLSKELGITVQEASQYITTYFEEYPRVRKFLDIVTETAKLHGFVETFYGTRRYISGINATNKNVQAQAVRMAVNTVVQGTAANIIKKVMIELHEEFKNDENIKMLLQVHDELIFEVRDEFAKEYMEKIEKIMENTVKFKKVPLKANGSVAKNWGLLK
>CP001685.1|ACV38714.1|891948_892719_+|AzlC-family-protein
MAQIRKLENYLKGLKDGTGIGIAYIPFGVAIGLISAKSFSQILPMIGLTSFGMYAGGAHSLLLKILYVMKSPPVEVILSIALINLRYLLLNIVIFRQLGEKTPIFQKFLVGVGLTDETVTYLTLKKATNAWYMMGVNTIPYFCYCFGTIFGAIFGEKLPESLMTSMNFVLYSIFFSMLIMALSQNFKYIRIVLLALIIKMAFSFLPILNKVSSGWVMILTMFLASFIYAQLYYNENPEKQENDEIDKRKGSDKIEL
>CP001685.1|ACV38715.1|892741_893047_+|branched-chain-amino-acid-transport
MILMTLIIMTVILRTLPIFVKIPENNLKVNKFFEALPYTVLTVLVFPDIFTSTGSTKFDIIRVLIGMAIVAYLTFRKTNLGIIIIVSIAVIYFLGMLKGSF
>CP001685.1|ACV38716.1|893107_893455_+|inorganic-pyrophosphatase
MSLDNYKKFLGQKIHVKMDRKMGERHLKYNFIYPVNYGYIPNTISEDGEEIDVYILGVFEPVDEFCGICRAIVYRYDDEENKLIVIPDGKNYTVSQMEVLVEFQERFFKHKILTE
>CP001685.1|ACV38717.1|893471_893981_-|conserved-hypothetical-protein
MKILKILFFSIIILIIIAGYHIYTQNQLKVPNSIVQNAITSKFPIEYSYPLGKIKLFNPKVYFENNKLVIETEYLNDALNEKISGIMIFTTDIRYDTTNSNLYLENFQIEKLTKENKEINLDKNPLIRPVLDYIFAQFEKKEIANLSNIDKFKMIKDIKIENNKLTVVK
>CP001685.1|ACV38718.1|894184_894922_+|polar-amino-acid-ABC-transporter,-inner-membrane-subunit
MKDLQKTRKLVKTSFFIAVVTIAAVLAFPRELTGKEWQIYMNSYLITTMGLTVGGAAIGIFFGMALAFFKFQKTNNEIVNMIKDVVIDEYVDIMRGTPMVLQLLILSVVIAVFDNYWVAVIALGMNSAAYVEETVRSGIESIDKGQMEAARATGMPYRMAMNEIIMPQAVKNILPALVNEFINLFKETSIVGYISVVDITMNSKSLQAVYYSVKPILFTGVVYYVSVKLFSFIGKRLEMRLKEND

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Crispr_ID: CP001685_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP001685_3

1188479-1188577

Unclear

Consensus_repeat	Method
TTTTACTGGATATACTACTTTTAC	CRISPRCasFinder

1 spacers

csx1,csx20

The CRISPR arrays of CP001685_3

>merge|CP001685|3|1188479-1188577|CRISPRCasFinder
TTTTACTGGATATACTACTTTTACATCTATGGTAAAATTGGTGACGAAATTTTAATAACATTGTTTCAATCCTTGTTTTAATGGATATACTACTTTTAC

>CP001685|3|3|1188479-1188577|CRISPRCasFinder
TTTTACTGGATATACTACTTTTAC	ATCTATGGTAAAATTGGTGACGAAATTTTAATAACATTGTTTCAATCCTTG
TTTTAATGGATATACTACTTTTAC

Protein	Signature genes	Signature genes Name	Protein_function
CP001685.1\|ACV38995.1\|1185417_1185870_-\|hypothetical-protein	unknown	unknown	unknown
CP001685.1\|ACV39006.1\|1198387_1199086_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|276809
CP001685.1\|ACV39001.1\|1191308_1193753_-\|hypothetical-protein	unknown	unknown	unknown
CP001685.1\|ACV39003.1\|1195891_1196263_-\|NrdI-protein	unknown	unknown	gnl\|CDD\|179603
CP001685.1\|ACV39004.1\|1196398_1196638_-\|conserved-hypothetical-protein	unknown	unknown	gnl\|CDD\|200072
CP001685.1\|ACV38990.1\|1181243_1181465_-\|hypothetical-protein	unknown	unknown	unknown
CP001685.1\|ACV38993.1\|1183687_1184149_-\|anaerobic-ribonucleoside-triphosphate-reductase-activating-protein	unknown	unknown	gnl\|CDD\|379137
CP001685.1\|ACV38992.1\|1182862_1183555_-\|GTP-binding-protein-HSR1-related	unknown	unknown	gnl\|CDD\|226124
CP001685.1\|ACV38988.1\|1178453_1180586_-\|CRISPR-associated-protein-DxTHG-motif-protein	csx1	cd09732_csx1_CAS-III	gnl\|CDD\|378186
CP001685.1\|ACV38996.1\|1186174_1188253_-\|CRISPR-associated-protein-DxTHG-motif-protein	csx1	cd09732_csx1_CAS-III	gnl\|CDD\|187799
CP001685.1\|ACV39005.1\|1196930_1198370_+\|asparaginyl-tRNA-synthetase	unknown	unknown	gnl\|CDD\|235176
CP001685.1\|ACV39007.1\|1199104_1200196_+\|DNA-protecting-protein-DprA	unknown	unknown	gnl\|CDD\|376794
CP001685.1\|ACV38987.1\|1176333_1178430_-\|hypothetical-protein	unknown	unknown	unknown
CP001685.1\|ACV39002.1\|1193768_1195868_-\|ribonucleoside-diphosphate-reductase,-alpha-subunit	unknown	unknown	gnl\|CDD\|236069
CP001685.1\|ACV38998.1\|1188891_1189062_-\|hypothetical-protein	unknown	unknown	unknown
CP001685.1\|ACV38989.1\|1180674_1181067_-\|conserved-hypothetical-protein	csx20	xls002255_csx20_CAS-I:CAS-III	unknown
CP001685.1\|ACV38999.1\|1189078_1190026_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|284250
CP001685.1\|ACV38994.1\|1184242_1184473_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223014
CP001685.1\|ACV39000.1\|1190192_1191200_-\|Ribonucleoside-diphosphate-reductase	unknown	unknown	gnl\|CDD\|275027
CP001685.1\|ACV38991.1\|1182667_1182772_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP001685.1\|ACV39005.1\|1196930_1198370_+\|asparaginyl-tRNA-synthetase	gnl\|CDD\|235176	PRK03932, asnC, asparaginyl-tRNA synthetase; Validated.	0
CP001685.1\|ACV39003.1\|1195891_1196263_-\|NrdI-protein	gnl\|CDD\|179603	PRK03600, nrdI, class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI.	2.36754e-35
CP001685.1\|ACV39006.1\|1198387_1199086_+\|hypothetical-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	3.16708e-11
CP001685.1\|ACV38993.1\|1183687_1184149_-\|anaerobic-ribonucleoside-triphosphate-reductase-activating-protein	gnl\|CDD\|379137	pfam13353, Fer4_12, 4Fe-4S single cluster domain. This family includes proteins containing domains which bind to iron-sulfur clusters. Members include bacterial ferredoxins, various dehydrogenases, and various reductases. The structure of the domain is an alpha-antiparallel beta sandwich.	8.53374e-29
CP001685.1\|ACV38992.1\|1182862_1183555_-\|GTP-binding-protein-HSR1-related	gnl\|CDD\|226124	COG3596, COG3596, Predicted GTPase [General function prediction only].	9.21816e-45
CP001685.1\|ACV38988.1\|1178453_1180586_-\|CRISPR-associated-protein-DxTHG-motif-protein	gnl\|CDD\|378186	pfam09455, Cas_DxTHG, CRISPR-associated (Cas) DxTHG family. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. The family describes Cas proteins of about 400 residues that include the motif [VIL]-D-x-[ST]-H-[GS]. The CRISPR and associated proteins are thought to be involved in the evolution of host resistance. The exact molecular function of this family is currently unknown.	3.41527e-08
CP001685.1\|ACV38996.1\|1186174_1188253_-\|CRISPR-associated-protein-DxTHG-motif-protein	gnl\|CDD\|187799	cd09668, Csx1_III-U, CRISPR/Cas system-associated protein Csx1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Protein of this family often fused to HTH domain; Some proteins could have an additional fusion with RecB-family nuclease domain; Core domain appears to have a Rossmann-like fold; loosely associated with CRISPR/Cas systems; also known as TM1812 family.	5.5847e-27
CP001685.1\|ACV39002.1\|1193768_1195868_-\|ribonucleoside-diphosphate-reductase,-alpha-subunit	gnl\|CDD\|236069	PRK07632, PRK07632, ribonucleotide-diphosphate reductase subunit alpha; Validated.	0
CP001685.1\|ACV39004.1\|1196398_1196638_-\|conserved-hypothetical-protein	gnl\|CDD\|200072	TIGR01068, Thioredoxin-like_protein_slr0233, thioredoxin. Several proteins, such as protein disulfide isomerase, have two or more copies of a domain closely related to thioredoxin. This model is designed to recognize authentic thioredoxin, a small protein that should be hit exactly once by this model. Any protein that hits once with a score greater than the second (per domain) trusted cutoff may be taken as thioredoxin. [Energy metabolism, Electron transport].	3.31061e-14
CP001685.1\|ACV38999.1\|1189078_1190026_-\|hypothetical-protein	gnl\|CDD\|284250	pfam06782, UPF0236, Uncharacterized protein family (UPF0236).	2.54797e-16
CP001685.1\|ACV38994.1\|1184242_1184473_-\|hypothetical-protein	gnl\|CDD\|223014	PHA03231, PHA03231, glycoprotein BALF4; Provisional.	0.000399718
CP001685.1\|ACV39007.1\|1199104_1200196_+\|DNA-protecting-protein-DprA	gnl\|CDD\|376794	pfam02481, DNA_processg_A, DNA recombination-mediator protein A. The SMF family, of DNA processing chain A, dprA, are a group of bacterial proteins. In H. pylori, dprA is required for natural chromosomal and plasmid transformation. It has now been shown that DprA is found to bind cooperatively to single-stranded DNA (ssDNA) and to interact with RecA. In the process, DprA-RecA-ssDNA filaments are produced and these filaments catalyze the homology-dependent formation of joint molecules. While the E.coli SSB protein limits access of RecA to ssDNA, DprA alleviates this barrier. It is proposed that DprA is a new member of the recombination-mediator protein family, dedicated to natural bacterial transformation.	1.67759e-92
CP001685.1\|ACV39000.1\|1190192_1191200_-\|Ribonucleoside-diphosphate-reductase	gnl\|CDD\|275027	TIGR04171, ribonucleotide-diphosphate_reductase_subunit_beta, ribonucleoside-diphosphate reductase, class 1b, beta subunit. Members of this family are NrdF, the beta subunit of class 1b ribonucleotide reductase. This form uses a dimanganese moiety associated with a tyrosine radical to reduce the cellular requirement for iron. [Purines, pyrimidines, nucleosides, and nucleotides, 2'-Deoxyribonucleotide metabolism].	0

>CP001685.1|ACV38996.1|1186174_1188253_-|CRISPR-associated-protein-DxTHG-motif-protein
MAKILIAGLGKGMIDIHSNERDYRKANYRIKNEDLKTYKIYKDEYFVTAVLEKHYEIDKTIYIGTAGSMWDKLYVHYCEKNKITIDEEYKKELRSITEKANKNTEVNLIDADKFNSKFSNVEIIVTKYGMDADEIFENFSEIMKIINSLNINDEIYLDITHSFRSNAMWMFLVMNYITDVIDKNIKIKTITYGMLEEMDDDIDDEGNLIKVASVINLKPFYDLMKWIKGANAFKEYGNSYEFLDMLTNEELKNSMEEFSNSMNMNYIGNIKENIEKINKIEEIIKTLDGPAKLLLPDILERFAENFGKEQNTFEMLLNLAEWHYNQKRYSMSFVNIVEAIYTFAGKILGIEDINKGKDKLREWINGINEENRVNYKKLSEKEIENRIELSKIFENFRIIRNNISHTLENKAKMQDIISKISKNIQKLREIFKMEYSNKILQSKNLQSQSTYTYLEKLAEEGKFIEIGRIISNGIYDFLFKELNVQKSGENKNVVKNWLDNKKENFEQKLKKEQLSMLMKLFLEVKNNSINITEIEIIKKIRHLQNILMNKVFIEAFKNKTLSNKIISEVKKEVNIVANKEDRKILIFKSIINEDEKTELIKKFKIKKIRKLTAETEKEWKNLENDNNKEKNIKRFKKIIEENIEPGDVLLINGETGITFDIVGWAKETGIIAIYEFKKEEDNFLTKTEFREY
>CP001685.1|ACV38995.1|1185417_1185870_-|hypothetical-protein
MLSKDLILKKREYLDSIAESIKKNRRIDSEVYLAKITKEHFEKDFFRIFNYVRNLLEEDIEEIYLEKDLYWERQETFTLKFKNSKDKNYIAFCFSLKGIYFKYEESKSLKNGYEFSITEDDIDEKFFCEIVDLYQRLEVLFTCRESLKIT
>CP001685.1|ACV38994.1|1184242_1184473_-|hypothetical-protein
MLSEGVANVTEGISDGRMEGSDAGANIGGTISGIFGEIGEEVGSAVGSVIGGAVGGVVGAVKGVCDAIGSFFGGWF
>CP001685.1|ACV38993.1|1183687_1184149_-|anaerobic-ribonucleoside-triphosphate-reductase-activating-protein
MKVKIASIQKNRYEDGPGIRLTVFFQGCNVKCKGCHNSEIQDIRTGREYEVKKLCDEIMSYNLPVKKITISGGEPLMQKEALEEFINEMHEKDFEIALYTSYDFKDVSRNILKKLKYLKVGKYMHELRIQGKFFGSSNQKFYSLKNGEIVNEN
>CP001685.1|ACV38992.1|1182862_1183555_-|GTP-binding-protein-HSR1-related
MTNFRDYRKMDIEKKLEKARFMPLDVMVTGVTGAGKSTTLNTIFRKNVAIVGNGVDPETMSLEFYSLNDVFRLWDTPGLGDGVKNDEIHKRKLVNLLYKTYSLDGNVYGWVDLAIVVLEGLNRDMGSTYTLLNEVIVPNIQADRILVVINQADMAMKGRHWNKETNRPDQVLVDFLEKQAISIQNRVKEATGVTIRKPVYYSAEYGYNIEKLLDFIIDNIILEKRQLIGA
>CP001685.1|ACV38991.1|1182667_1182772_-|hypothetical-protein
MKRLIKEKVMKYYEVKIKRSKQILGNKLMCSSKK
>CP001685.1|ACV38990.1|1181243_1181465_-|hypothetical-protein
MTGIEEAVGTAVVVTAGVVAVAEGINQTVKLMNETVNTANDMFTTMGNMAEDFGSSVNDFCNEVSSFFDSFSW
>CP001685.1|ACV38989.1|1180674_1181067_-|conserved-hypothetical-protein
MKKKEKKVLLVFSHQLTENQKKELVEEYKVKEIKNLPEELQNMWSNVSIKKNYKENLEKIKKFIKENFNKDDIILIQGNWGYTYNLVKWSIENELIPVYSYTERNVEEIKEGEIVKKISYFEHVKFVKYE
>CP001685.1|ACV38988.1|1178453_1180586_-|CRISPR-associated-protein-DxTHG-motif-protein
MESNILIMSLSNNLEENIKRAKKNKKEYRWKDKKFNLEKYEYLTKVYLEKLKPNKIVVFGTQQSSWNYLYNLLNEYFYSEDKKIIFEESKQNDIGYIKKEFEKKFLDKCKIFFVESKNNFDNQNIASDLIFQIEEIKNILDEQSRSKIYVDITGGLRIMYMSLVSIINILKMYYSQLNLKVLYSQNDINTDYFQIIDITNVLEKLDFVDAVSSFTKYGSIDKLREIGNRDLLNKLDEFYIKLQFNLKGIDDIYKKITKINLKNEYENILKEKIKEVKSLKNEKYHNKVKNYGLEIVNKYESDNKKYKNLKDKRDKIVHPLNKSGKYIENNDEYRNSSKRKILIWNLGSGESGKGYEKIFYEYLDNEGKKEIIETQYTFEPYIEDYNQIYIFGLETGKWDILTENFKNKGIMLPNEKIKYVQIDNFGDVDELYLKIKNEIEVKKREIIEIDMDITHSFRDIPFNLLTSLRLFELLNDNVIIHSIYYGERILNSEYGSIYKIPILKIINLYKSIAEFKDYTKYTNALENTKMIDEKLSKIMRKISEAYTYNEYKKIIEISKEFEKINNKELDLINKKVYEIIEVKLIKNETYEELIKFVRKQKDSKNYALALFFLIDIYKYKIFKIDSKEKSENFYKKVEKLKTKNIDNKIDELINSINKLNEIRNDAGHINTRERNDTTYCSNLLNNVIEIMNKFTLQDIEKYSKKYGKIK
>CP001685.1|ACV38987.1|1176333_1178430_-|hypothetical-protein
MEKIGISRTELAQKIRKLMIDNRNIQKYEKIDDNFLIDYYFDNYDKKNNKTGIKIEEDNFDLKLFEEDFKRHLLNEKKLLEEEGVDTDKITKIVSAFSHSFGEKKSILEDLPFEKDLKIFPNIETLYLLYTEQTKNKFLEYKETSKYKDIVKIEGVLIDTGIDTLYRKVINLILEGKISKNNTVLDTTLGLKEIGIVFYKISVEKQIKSINWRETMLSNYKPVDKNNKDRFVIEKGQGPRMSLVTKLNLMKDPLEESNRIYRKINENIMKANCQTVSDLYEVVGIDDLRFFYEEIGKLFNYFKMLEYNEDIEDFYNDLNKGLRKIFEYKFLPENISRLREYVKYLLRIVYRVENDNINWLKFSKNIFGITENEIINDEEEKAKRALERKGKETFDLDLNYEDSEIDDEEISIDGTDYFFYLLLKQAVFEKVSSYYFENVKNILKDYYEEEKVEKIISIVNSKDKKTNEKIKQIKGILFDEFSMEYELEEFEIPNLADMNIGLIRYKGGVLDVPFEDEGKLEMLKINLKEESFIRKKDKRDEFDISNEKDRKKLKKKIEVDFTLEKICDKYDKGEIELPFKISEKSDIVEIQNKTKKVVTKTDRKTQIEKIFFHNPDAIINAPIVELFNNIEKNKFEISKKDMEGRFRIKDQNVTKLKKIITGLNQVIRRKIEEKFPEADEIEDFIIYENGLKINLKYR
>CP001685.1|ACV38998.1|1188891_1189062_-|hypothetical-protein
MYFSDKRTSSLEKIIEMECLPEIVNEAEKSTNIPYLRGGECPIREVLKEISQSKIF
>CP001685.1|ACV38999.1|1189078_1190026_-|hypothetical-protein
MVSSMIRISNFSSLVKTFFKNIFSFRLPFEQQFKLFVTKAFETLFRVYVKRVDGAFFHSDERKDKFKSKGFVKRTVTTAFGHVTFERRKYVDKKTGIHYYIDEKIGLKRYKRLSEELIFTILFEYQYATASFLAKTYGVSRATVYNLVNSFQMPKLDIERFERDDDSPVYMEIDEDHMKCRRSKNTYMRLVSIHRGIEEICRDRNKLIDKHTIMFPTSVPLEEVSEYVLNYLEKRYNMDKKKLIVNSDGGIWIDSFVGELRIYNPIHIYDKFHLVKAIVEISKKDKEVSKNLYRWLEKDKGKSVIPHFLCKLWKK
>CP001685.1|ACV39000.1|1190192_1191200_-|Ribonucleoside-diphosphate-reductase
MEKKIYEAVNWNTPENDYVEMFWEQNLKQFWIDTEYIPSKDIDSWNSLEPAMKLAYLHVLGGLTLLDTLQSHTGMPKIIDHIESLQNRSVLSYMCMMETIHAKSYSTIFTTVASTREINETFRWVQENPHLQYKANKIDTYYQKMNNPEASKRDIAMALAASVYLETYLFYSGFFLPLWLAGQGEMVASCDIIKKIIADESIHGVFVGLLFQELYNSFSEEEKADMRAELKKLMYDLYENETRYTDEIYGDLGLTGNVKEYIRYNANKALMNLGFEEEFEVKNVNPIVLNGLNVETTQHDFFSKKSTNYEKALEVVHLHDDDFKFDEDVNADDLI
>CP001685.1|ACV39001.1|1191308_1193753_-|hypothetical-protein
MDINEAIDIIFNINESKEAFDVIENNIPQITSYLILKLKKIIEKKEIEEIEEFHMILHLILKFRIIETFDFLLEILEFINFRVNIQLFIMTLSKIIHSYEKNIDKLNNYIFSQTNPLSQHIVYKAIILSYEENKELQKINDFLREIVNYFVNTNFEYFKYEVFLLEIINDNIYFKNYQLIDNKNKLEKLIEKIIIFSEIGYKSENFEKYFCLLYKINPKKFNKIIEIENYINNIKNEVFDQVEIGLFKKNNNVKKGKLLFKKINKKIENSNDNLIKITLKKMRKYDFNSRKIPHTKEEYYEEIYNCFDLTGNLVDRYVLVNEKFGEILKKYDILKKKIEELIDKVKEELNELKKSRYNRKGILEDIEVVKLKENYIKRRKLEVLFKNQENIESGLLIFYMKELETFFKNFSSNEKIKELSLFSQNQIDYRISYYNQIIRKFEFLLAEIPISTLNKIYYNIKFIPYYDNIQNIGRRNLKLSDEEYNNTIIEKINLKIENHPLNPINLEKYNKNEKDYLNILRKNSSTAIANIKHNISNSICLSKRKKIIEKIINGIENKDYEVVINILPIQIEGLFKDFLEYSLMYEYCQDIEVYNKIMNIDLVQKIDFGIKKNLNMFFDTIAYFKYYFNSLIRNNVAHGNYDFLVDNVKDIKSEIFALELLYDLNSIIHTISETNEIDTAQKYIEETFDRIKKSEKYNGSNEINMDCLINDLNGTRERFNLSKFKSGLFVSYEATRILYWIFNPLYEKYLDNNKLKSIRNLIISSQFFSYIKNRIRSNFENKELMKSMKIIKTSFELDNEMSLLITEIIKYLNS
>CP001685.1|ACV39002.1|1193768_1195868_-|ribonucleoside-diphosphate-reductase,-alpha-subunit
MVDKRAKKWIYLNNEIMVKQGEDFQLEKDKEAVYSYFVDYVNKNTVFFHNLEEKMRYLIKNDYYINFYEMYSHDEIKEVFKLVYDKKFRFASFMSASKFYQSYALMDDTGEKFLERYEDRIATVSLYLAQGNVEKAKEYALMLINQEYQPATPTFLNSGKKRSGELVSCFLDEMGDNLSGIGYIFDSSMKLSSIGGGVSINLSKIRARGEAIKGVEGRASGVLPIMKILEDIFSYANQLGQRAGAGAVYLNVFHSDINEFLDSKKINVDEKIRIKSLSIGVIVPNKFMQLAIEDEVCYTFNPHTVFLEYGQYLDEMDMNEMYEKLVDNPNVKKKKINARELLVKISQTQKESGYPYLFFKDNANKEHALKEIGTVKFSNLCTEIMQLSEVSDINAYYEEDTIRRGISCNLGSLNIATVMENKRIKEATKAAIDSLTMVSDLTNIDIVPSIKKANDELHSVGLGAMNLHGYLAKNFIMYESKEALDFCNVFFMMVNFYSLERSMEIAKEKGETFKDFEKSEYANGNYFDKYITKEYVPQTEKIKQLFEGICIPTKEDWANLKEQVMKHGVYNAYRMAIAPNQSTSYIMNSTASVMPVVDTIEVREYGDSTTFYPMPYLTNDNYFFYKSAYDMNQKNILKLISVIQRHVDQGISTILYTKSTDSTRDLARLYIYAHRLGLKSLYYTRTRKATIEECISCSV
>CP001685.1|ACV39003.1|1195891_1196263_-|NrdI-protein
MFIYYDSKTGNVHRFTKKMQSQRPDWHFIKINPTMVIKNEGHFLTFTTKIGEIPTTTDEFLQNENNSKLLKSVSSSGNRNWGQFFALAADKIQQKYGIPVLMKFELSGTSTEVENYIKYLENN
>CP001685.1|ACV39004.1|1196398_1196638_-|conserved-hypothetical-protein
MRRIVKFEKNDCNPCAMVSDLLDKKGVEYERVNPFDNPEMAVKYRVRSVPTVILFEENKEIKRTIGFKPEEINEIISMI
>CP001685.1|ACV39005.1|1196930_1198370_+|asparaginyl-tRNA-synthetase
MCEYLYRLFLYLVIQRYMLLELRELQKNTKEYLGKEIEINGWVKKIRSQKNFGFIELNDGTFFTGIQVVFEEGLENFEEISKLTISTSVKVTGIVVESVGKGQAYEIKATKISVYQKADSDYPLQNKRHSFEFLRTIAHLRPRTNAFFATFRVRSILSYAIHKFFQEKNFVYVQTPIITGSDAEGAGEMFRLTTLDINNIPKTENGSIDFKQDFFGKEANLTVSGQLNVETFATAFKNTYTFGPTFRAEKSNTPKHAAEFWMMEPEIAFADLDVNMDVIEEMIKYIVNYVRENAKEEMEFFNKFVDKDLFNRLDTLVNNEFGRITYTEAIEILKNSKQKFEYEVEWGIDLQTEHERYLAEKHFKKPVFVTDYPKDIKAFYMKLNEDGKTVRAVDLLAPGIGEIVGGSQREDDYEILLGKINEMGLKEEDYWWYLDLRKYGSVPHSGFGLGFDRMLMYITGMTNIRDVIPFPRTTKNLEF
>CP001685.1|ACV39006.1|1198387_1199086_+|hypothetical-protein
MKRMIMMMGILLIFATVVKANYYITENTTVTSPGDATTVEEERIAPTVEPDEITRQAFEPGNALNKSRNKETKNIPVERKTVDSGTMPATQTEDISTEAKYDSYANYENATLAKKSSSATFRMAQLYFRDGLYEKAVNLALKDEAPDIPVMYVIAIGSRLMGNNEQSIDYYSRILSQDNNQAEAKLGMGIAYKSKGDFSKALGYLRDYNSTHSDDEVKKEIAVLNEILAGSR
>CP001685.1|ACV39007.1|1199104_1200196_+|DNA-protecting-protein-DprA
MEWLRLKEYGMKNAHIKKLMLIFQDFEELFYEENFKLFNDELKSQLEEAMKIDMTARLELYERNRVRIISANDKEYPKKLKEIKDFPVFLYLKGKKLKDYDKIKIDKGKISVDNKRNIGIVGTRRATKFGKTACEKIVNELVNYEVTVISGLADGIDTIALKTALDKEIEVVSVVGTGLDIVYPYENRDLWERIGEVGTLISEYPLGTQPTRWTFPRRNRIIAGISDGVLVAESFKKGGALITAELAFSMNREVFAVPGFINYPSFEGCNDLIKNNKAKLVTCGNDIAEEFLWDIKKEKSKLQKLTSEEQIVFETIMEEVSFEQILQNVKEKIEKNKLFSIIMSLKIRGLITETNGAKYIRIV

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Crispr_ID: CP001685_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP001685_4

1402998-1403634

Orphan

I-B

Consensus_repeat	Method
GTTTCAATCCTTGTTTTAATGGATAACTTACTTTAAC	CRISPRCasFinder
GTTTCAATCCTTGTTTTAATGGATAACTTACTTTAAC	CRT
GTTTCAATCCTTGTTTTAATGGATAACTTACTTTAAC	PILER-CR

8 spacers

The CRISPR arrays of CP001685_4

>merge|CP001685|4|1402998-1403634|CRISPRCasFinder,CRT,PILER-CR
TTTTTAAACCTTATTTTAATGGATAAATTACTTTAACTTTAGTAGGACCTAGTGGCTCAGGAAAATCCACTATTGTTTCAATCCTTGTTTTAATGGATAACTTACTTTAACTAAAAGATCCTGATGAGCTTCTAATTGGATTAGATATGTTTCAATCCTTGTTTTAATGGATAACTTACTTTAACTTTTAATTTAGACTCCTCTTCTTTCTTGTCTTCATTTGTTTCAATCCTTGTTTTAATGGATAACTTACTTTAACAATTGAGAAAAGAGGTGTACACAGGTGTAAATCAACGTTTCAATCCTTGTTTTAATGGATAACTTACTTTAACTTTTTTCAAGGAGAAAATAAAATGAATAAGTACAAGCAAGTTTCAATCCTTGTTTTAATGGATAACTTACTTTAACCGAAGGTGTAAATGGAGAAAGATATTCTGATTTAATAAAGTTTCAATCCTTGTTTTAATGGATAACTTACTTTAACGTTATTCCGAACATGTCGGAGTGTAGGTTGTTCGGGGACGGTTTCAATCCTTGTTTTAATGGATAACTTACTTTAACAACTCTTCATTAGTGAAGAAAGGAGTAGGGCTAAAAACAGTTTCAATCCTTGTTTTAATGGATAACTTACTTTAAC

>CP001685|4|4|1402998-1403634|CRISPRCasFinder
TTTTTAAACCTTATTTTAATGGATAAATTACTTTAAC	TTTAGTAGGACCTAGTGGCTCAGGAAAATCCACTATT
GTTTCAATCCTTGTTTTAATGGATAACTTACTTTAAC	TAAAAGATCCTGATGAGCTTCTAATTGGATTAGATAT
GTTTCAATCCTTGTTTTAATGGATAACTTACTTTAAC	TTTTAATTTAGACTCCTCTTCTTTCTTGTCTTCATTT
GTTTCAATCCTTGTTTTAATGGATAACTTACTTTAAC	AATTGAGAAAAGAGGTGTACACAGGTGTAAATCAAC
GTTTCAATCCTTGTTTTAATGGATAACTTACTTTAAC	TTTTTTCAAGGAGAAAATAAAATGAATAAGTACAAGCAA
GTTTCAATCCTTGTTTTAATGGATAACTTACTTTAAC	CGAAGGTGTAAATGGAGAAAGATATTCTGATTTAATAAA
GTTTCAATCCTTGTTTTAATGGATAACTTACTTTAAC	GTTATTCCGAACATGTCGGAGTGTAGGTTGTTCGGGGACG
GTTTCAATCCTTGTTTTAATGGATAACTTACTTTAAC	AACTCTTCATTAGTGAAGAAAGGAGTAGGGCTAAAAACA
GTTTCAATCCTTGTTTTAATGGATAACTTACTTTAAC

>CP001685|4|3|1402998-1403634|CRT
TTTTTAAACCTTATTTTAATGGATAAATTACTTTAAC	TTTAGTAGGACCTAGTGGCTCAGGAAAATCCACTATT
GTTTCAATCCTTGTTTTAATGGATAACTTACTTTAAC	TAAAAGATCCTGATGAGCTTCTAATTGGATTAGATAT
GTTTCAATCCTTGTTTTAATGGATAACTTACTTTAAC	TTTTAATTTAGACTCCTCTTCTTTCTTGTCTTCATTT
GTTTCAATCCTTGTTTTAATGGATAACTTACTTTAAC	AATTGAGAAAAGAGGTGTACACAGGTGTAAATCAAC
GTTTCAATCCTTGTTTTAATGGATAACTTACTTTAAC	TTTTTTCAAGGAGAAAATAAAATGAATAAGTACAAGCAA
GTTTCAATCCTTGTTTTAATGGATAACTTACTTTAAC	CGAAGGTGTAAATGGAGAAAGATATTCTGATTTAATAAA
GTTTCAATCCTTGTTTTAATGGATAACTTACTTTAAC	GTTATTCCGAACATGTCGGAGTGTAGGTTGTTCGGGGACG
GTTTCAATCCTTGTTTTAATGGATAACTTACTTTAAC	AACTCTTCATTAGTGAAGAAAGGAGTAGGGCTAAAAACA
GTTTCAATCCTTGTTTTAATGGATAACTTACTTTAAC

>CP001685|4|3|1403072-1403634|PILER-CR
GTTTCAATCCTTGTTTTAATGGATAACTTACTTTAAC	TAAAAGATCCTGATGAGCTTCTAATTGGATTAGATAT
GTTTCAATCCTTGTTTTAATGGATAACTTACTTTAAC	TTTTAATTTAGACTCCTCTTCTTTCTTGTCTTCATTT
GTTTCAATCCTTGTTTTAATGGATAACTTACTTTAAC	AATTGAGAAAAGAGGTGTACACAGGTGTAAATCAAC
GTTTCAATCCTTGTTTTAATGGATAACTTACTTTAAC	TTTTTTCAAGGAGAAAATAAAATGAATAAGTACAAGCAA
GTTTCAATCCTTGTTTTAATGGATAACTTACTTTAAC	CGAAGGTGTAAATGGAGAAAGATATTCTGATTTAATAAA
GTTTCAATCCTTGTTTTAATGGATAACTTACTTTAAC	GTTATTCCGAACATGTCGGAGTGTAGGTTGTTCGGGGACG
GTTTCAATCCTTGTTTTAATGGATAACTTACTTTAAC	AACTCTTCATTAGTGAAGAAAGGAGTAGGGCTAAAAACA
GTTTCAATCCTTGTTTTAATGGATAACTTACTTTAAC

Protein	Signature genes	Signature genes Name	Protein_function
CP001685.1\|ACV39201.1\|1393124_1393736_-\|ATP-dependent-Clp-protease,-proteolytic-subunit-ClpP	unknown	unknown	gnl\|CDD\|178955
CP001685.1\|ACV39208.1\|1402353_1402845_-\|protein-of-unknown-function-DUF150	unknown	unknown	gnl\|CDD\|234627
CP001685.1\|ACV39211.1\|1405162_1405894_+\|Sel1-domain-protein-repeat-containing-protein	unknown	unknown	gnl\|CDD\|276807
CP001685.1\|ACV39207.1\|1401109_1402354_-\|NusA-antitermination-factor	unknown	unknown	gnl\|CDD\|237061
CP001685.1\|ACV39217.1\|1411805_1412093_-\|hypothetical-protein	unknown	unknown	unknown
CP001685.1\|ACV39203.1\|1395240_1396920_-\|single-stranded-DNA-specific-exonuclease-RecJ	unknown	unknown	gnl\|CDD\|273193
CP001685.1\|ACV39200.1\|1391504_1392734_-\|ATP-dependent-Clp-protease,-ATP-binding-subunit-ClpX	unknown	unknown	gnl\|CDD\|235422
CP001685.1\|ACV39202.1\|1393893_1395180_-\|trigger-factor	unknown	unknown	gnl\|CDD\|234956
CP001685.1\|ACV39214.1\|1408046_1409741_+\|alpha,alpha-phosphotrehalase	unknown	unknown	gnl\|CDD\|274115
CP001685.1\|ACV39218.1\|1412189_1412792_-\|hypothetical-protein	unknown	unknown	unknown
CP001685.1\|ACV39209.1\|1403993_1404533_+\|Chromate-transporter	unknown	unknown	gnl\|CDD\|376780
CP001685.1\|ACV39205.1\|1397432_1400465_-\|translation-initiation-factor-IF-2	unknown	unknown	gnl\|CDD\|235401
CP001685.1\|ACV39212.1\|1406111_1406729_+\|Tetratricopeptide-TPR_2-repeat-protein	unknown	unknown	gnl\|CDD\|276809
CP001685.1\|ACV39213.1\|1407076_1407904_+\|PP-loop-domain-protein	unknown	unknown	gnl\|CDD\|236737
CP001685.1\|ACV39199.1\|1389071_1391468_-\|ATP-dependent-protease-La	unknown	unknown	gnl\|CDD\|223542
CP001685.1\|ACV39210.1\|1404529_1405081_+\|Chromate-transporter	unknown	unknown	gnl\|CDD\|376780
CP001685.1\|ACV39204.1\|1397040_1397409_-\|ribosome-binding-factor-A	unknown	unknown	gnl\|CDD\|376719
CP001685.1\|ACV39215.1\|1409846_1410617_+\|molybdopterin-binding-domain-protein	unknown	unknown	gnl\|CDD\|234789
CP001685.1\|ACV39216.1\|1410650_1411457_+\|Tubulin/FtsZ-GTPase	unknown	unknown	gnl\|CDD\|276961
CP001685.1\|ACV39206.1\|1400461_1401025_-\|protein-of-unknown-function-DUF448	unknown	unknown	gnl\|CDD\|225350

Protein	Function_ID	Function_description	E-value
CP001685.1\|ACV39201.1\|1393124_1393736_-\|ATP-dependent-Clp-protease,-proteolytic-subunit-ClpP	gnl\|CDD\|178955	PRK00277, clpP, ATP-dependent Clp protease proteolytic subunit; Reviewed.	3.79278e-135
CP001685.1\|ACV39208.1\|1402353_1402845_-\|protein-of-unknown-function-DUF150	gnl\|CDD\|234627	PRK00092, PRK00092, ribosome maturation protein RimP; Reviewed.	1.02501e-40
CP001685.1\|ACV39211.1\|1405162_1405894_+\|Sel1-domain-protein-repeat-containing-protein	gnl\|CDD\|276807	sd00010, SLR, Sel1-like repeat. Sel1-like repeats (SLRs) share similar alpha-helical conformations with Tetratricopeptide repeats (TPRs), but with different consensus sequence lengths and superhelical topologies. SLRs contain 36 to 44 amino acids and are present in bacteria and eukaryotes but not in archaea. SLR proteins are involved in a variety of functions, and many serve as adaptor proteins for the assembly of macromolecular complexes. The SLR family was named after the Caenorhabditis elegans Sel1 protein which is predicted to fold into 11 SLRs, a transmembrane domain, and an N-terminal signal sequence. The human Sel1L protein contains an additional fibronectin type-II domain and an N-terminal PEST sequence. Its downregulation is associated with the development of breast and pancreatic carcinomas.	4.25139e-29
CP001685.1\|ACV39207.1\|1401109_1402354_-\|NusA-antitermination-factor	gnl\|CDD\|237061	PRK12327, nusA, transcription elongation factor NusA; Provisional.	9.37327e-138
CP001685.1\|ACV39203.1\|1395240_1396920_-\|single-stranded-DNA-specific-exonuclease-RecJ	gnl\|CDD\|273193	TIGR00644, recJ, single-stranded-DNA-specific exonuclease RecJ. All proteins in this family are 5'-3' single-strand DNA exonucleases. These proteins are used in some aspects of mismatch repair, recombination, and recombinational repair. [DNA metabolism, DNA replication, recombination, and repair].	6.14086e-131
CP001685.1\|ACV39200.1\|1391504_1392734_-\|ATP-dependent-Clp-protease,-ATP-binding-subunit-ClpX	gnl\|CDD\|235422	PRK05342, clpX, ATP-dependent Clp protease ATP-binding subunit ClpX.	0
CP001685.1\|ACV39202.1\|1393893_1395180_-\|trigger-factor	gnl\|CDD\|234956	PRK01490, tig, trigger factor; Provisional.	1.11512e-124
CP001685.1\|ACV39214.1\|1408046_1409741_+\|alpha,alpha-phosphotrehalase	gnl\|CDD\|274115	TIGR02403, Trehalose-6-phosphate_hydrolase, alpha,alpha-phosphotrehalase. Trehalose is a glucose disaccharide that serves in many biological systems as a compatible solute for protection against hyperosmotic and thermal stress. This family describes trehalose-6-phosphate hydrolase, product of the treC (or treA) gene, which is often found together with a trehalose uptake transporter and a trehalose operon repressor.	0
CP001685.1\|ACV39209.1\|1403993_1404533_+\|Chromate-transporter	gnl\|CDD\|376780	pfam02417, Chromate_transp, Chromate transporter. Members of this family probably act as chromate transporters. Members of this family are found in both bacteria and archaebacteria. The proteins are composed of one or two copies of this region. The alignment contains two conserved motifs, FGG and PGP.	3.0194e-43
CP001685.1\|ACV39205.1\|1397432_1400465_-\|translation-initiation-factor-IF-2	gnl\|CDD\|235401	PRK05306, infB, translation initiation factor IF-2; Validated.	0
CP001685.1\|ACV39212.1\|1406111_1406729_+\|Tetratricopeptide-TPR_2-repeat-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	2.11544e-16
CP001685.1\|ACV39213.1\|1407076_1407904_+\|PP-loop-domain-protein	gnl\|CDD\|236737	PRK10696, PRK10696, tRNA 2-thiocytidine biosynthesis protein TtcA; Provisional.	8.87529e-72
CP001685.1\|ACV39199.1\|1389071_1391468_-\|ATP-dependent-protease-La	gnl\|CDD\|223542	COG0466, Lon, ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones].	0
CP001685.1\|ACV39210.1\|1404529_1405081_+\|Chromate-transporter	gnl\|CDD\|376780	pfam02417, Chromate_transp, Chromate transporter. Members of this family probably act as chromate transporters. Members of this family are found in both bacteria and archaebacteria. The proteins are composed of one or two copies of this region. The alignment contains two conserved motifs, FGG and PGP.	2.0598e-41
CP001685.1\|ACV39204.1\|1397040_1397409_-\|ribosome-binding-factor-A	gnl\|CDD\|376719	pfam02033, RBFA, Ribosome-binding factor A.	5.62925e-23
CP001685.1\|ACV39215.1\|1409846_1410617_+\|molybdopterin-binding-domain-protein	gnl\|CDD\|234789	PRK00549, PRK00549, competence damage-inducible protein A; Provisional.	3.53128e-94
CP001685.1\|ACV39216.1\|1410650_1411457_+\|Tubulin/FtsZ-GTPase	gnl\|CDD\|276961	cd02201, FtsZ_type1, Filamenting temperature sensitive mutant Z, type 1. FtsZ is a GTPase that is similar to the eukaryotic tubulins and is essential for cell division in prokaryotes. FtsZ is capable of polymerizing in a GTP-driven process into structures similar to those formed by tubulin. FtsZ forms a ring-shaped septum at the site of bacterial cell division, which is required for constriction of cell membrane and cell envelope to yield two daughter cells.	1.4885e-42
CP001685.1\|ACV39206.1\|1400461_1401025_-\|protein-of-unknown-function-DUF448	gnl\|CDD\|225350	COG2740, COG2740, Predicted nucleic-acid-binding protein implicated in transcription termination [Transcription].	1.87582e-12

>CP001685.1|ACV39208.1|1402353_1402845_-|protein-of-unknown-function-DUF150
MEQILNEFEKRIELHLKEMKLELADLEYVRDGGYNYLRVYVEKEDGSTTTLDDCIDFSREIDGVADDLIDEKFFLEVSTPGVERRLKKPKDFLRFLGEKINVQAKSNIDGAKKFLGKLEKFENDTIFLLDENLGKVVEIPLLKLKKANLIYEIPNGVLNGEEN
>CP001685.1|ACV39207.1|1401109_1402354_-|NusA-antitermination-factor
MRGRDQKIFLEALDELEKEKGILKEELLETIETALLAAYKKNYGEKDNVKVTINRNSGDVKVFSQRLIVENVENPDEEISLEDAISVKKRAKLGDILDLEINAESFKRNAIQNAKQIVVQKVRECEKRNIFNKFKEIENSIVSANVRKTDEKGNLYIDINGLEAIVPFKELSPTDNFVQNERVKIYVGNVEESTKFTKTFVSRKSEELLRGLLELEVPEIEEKIIEIKNIAREAGSRAKVAVYSEDENLDVKGACIGRNGMRIQNIIDELRGEKIDIVLWNEDIREFVKNALNPAEVLLVEIVEGEEENTKIAKVLVAENQLSLAIGKKGQNSRLAARLCGVKIDIHTEPFEIEQNDEYELEEETAFHNSVESDLEESEFENIDNADEAEISDETDEDYEEESAFAGLNKNEDY
>CP001685.1|ACV39206.1|1400461_1401025_-|protein-of-unknown-function-DUF448
MDTLKDKEMKIPERMCICCRKKGEKPEFFRVAERDGKYVFDKEMKIQARGFYVCKTVQCIEKLSKHKKYNIEMEHLVKMLEEMKKQKKNIIDILKPMKNSEYFVFGIDETIDGIKREKIKLVVIPKDIKSKYIEEFKKLSEKFNFKIVFIEKKAELIELFSRDVNVVGIFDKKVIKGILSKVEVMNG
>CP001685.1|ACV39205.1|1397432_1400465_-|translation-initiation-factor-IF-2
MKIHELAKELGYSGTAKFIEDIAKIGVKGKKHHMNVLSSEEESLIRKNLQKNIQSNQNNSNKSKPENLNKNEMKTKENSTPKVSNHSNIQKNNAKQNKNNENYKKNAKQPLNKNSKLNSEKNLDNKQNQKFEQSNKFDKKENQKKMEMKANLSSQNNKMNDVNKEKQNFQNRENRDNRENSGRNYQNRDNQGRDNRNRDNFRKDGRDNFRRDNRNFNKDGNNQSRDNRDNRNFNRDRDNNNRDNRENSGRNFQNRDNQGRDNRNRDNFRKDGRDNFRRDNRNFNKDGNNQSRDNRENRDNRGFQNRDRDNQSGGRNFRDRQDNRNFSDRGGFNRDRDDFRRDNRNFSNKKETQSEIPASTVAEKGRAGGKGKGKFDKKKYEKNRRDREQQEKELRSDFRKDDKKKKKNKKQEKAVKDEIVRIEGESIGMITIGEEIVIKDLAEKLGINVSDIIKKFFMEGKLLTANAILSFEEAEEVALDYEVIVEKEVIEEVSYGEKYHLEQEDKEAELVTRAPVITIMGHVDHGKTSLLDALRHTNIMSDEAGGITQKIGAYQVNWKGQRITFIDTPGHEAFTEMRARGANITDISILIVAADDGVKPQTVEAISHAKEANVPIIVAINKIDKPGADTMKVRTELTEYGLMSPEWGGTTEFVEISAKKKINLEELLETILITAELEELKANPNKRPKAVVVESRLDPKMGAVADVLVQEGTLKIGDVFVAGESHGRVRSMLDDRGKKINKAIVSQPVEITGFNVVPNAGDILYGVESDKQAKKIVEDFIRERKVNEQNKKKHISLESLSQELEEQELKELKCIIRADSKGSVEALRESLEKLNTEKVVINIIQGSAGAVTEGDVKLAEASNAIIIAFNVRPTTPARIIAEKTGVEIRNYNVIYHATEEIEKAMKGMLDPEFKEVYYGRIEVKQVFKVSNVGNIAGAVVVDGKVTKDSKIRVIRDGIIIFDGELGSLKRFKDDVKEVVMGQECGIGIQDFNDIKAGDIIESYIMEEIPR
>CP001685.1|ACV39204.1|1397040_1397409_-|ribosome-binding-factor-A
MNDRRKKGLEKEISRIVGMTLLTEVKNDKIKNLVSIHKVELTKDGRYLDLTFSILDLKDNVNREKIAEDLNKLKGFFRKQIGSQLSIRFVPEVRIHLDDSVEYGVKIASILNEIKKENDSIE
>CP001685.1|ACV39203.1|1395240_1396920_-|single-stranded-DNA-specific-exonuclease-RecJ
MKWEIKNYDEKYLASKSFEFGESKLISRLLLNRGINTKEKVSKFLNSDKKDIHNPFLFENMEKVVKRIQQAGENKEKIVVYGDYDVDGISGVAYLVIMLRKLGLNVDYYIPNRVHEGIEINKHLVTFLEKREAKLFITVDTSINNREEILMLRNNGIDIIITDHHRQVEVCEEMDILTINPKTSKTYPNKFLSGSGVAFKLADAVYERYGANKKILYDYLDIIMIGTVADVVPMTDENRFIIKKGLNNLKKTKIKGLKYIINYLKINPRNITTSDIGFFIAPIFNALGRIDNSKIVVNFFIQEDDFKLFSIIEEMKRANKIRRYLENEIYSELEEKIQRLERPKYIFMKSRKWHSGVIGVVCSRISIKYNIPVILISIKNGYGKASCRSIEGINIFDILKSVSDKLERFGGHDLAAGFLVSEKYLGEIEKHLRQKLARKNRENVQKTLYVDAWLNIENLNKRKLHEINRLSPFGLDNQEPNFMDSDVNFFNLTKFGINNRHFKGFVRKNNRIISVIGYNLGHKLKMNNFYKKKFKIVYTPIFKSVHSDLFIELKIKDFK
>CP001685.1|ACV39202.1|1393893_1395180_-|trigger-factor
MAVKKLNESTYEVSAVREGEELKHLKEHVLVHFKDAKVDGFRPGHVPAKVIENKFKKEIEGEILNHIISDEYRKAVAENELRPIADIKLEKYELNDDKVEVVFTIPVLPSFELGQYKGVEVEKENVEITDEKVNEEIEKLRENAAKLKEVEENEEAKNDDVVNINFEGFIDGEAFDGGKAEGYDLTLGSHSFIDTFEDQIVGHKKGDEFDVNVTFPEEYHAENLKGKPALFKVKVNSIKRKEEAELNDDLAKELGFDSVEDMTNKTRENITKREEARAENDFKNKVVEAVVDAITFDVPEALVQREIDYQINRFAQQLQMQGMKLEQYFQMTGQTLETMRESAKENAERAVKTELVLAEIAKAEEIKTTDDEITKEIETLAAMYGIDKETLLSDVRKNGNYERFIDETNYRLVNQKTIDLLVNEAKVK
>CP001685.1|ACV39201.1|1393124_1393736_-|ATP-dependent-Clp-protease,-proteolytic-subunit-ClpP
MKEKLTERGGNNMSVYSPVVIENDGRGERSYDIYSRLLKDRIIFVSGEVEDGMANAIVAQLLFLDAQDNEKDIVMYINSPGGVITAGLAIYDTMRHIKSDVSTVCVGQAASMGAVLLSAGAKGKRYSLPNSRIMIHQPLGGARGQATDIQIQAKEIERMKEITSKILSEATGKSVEEIYADTERDNFMSPEEAVNYGLIDKIL
>CP001685.1|ACV39200.1|1391504_1392734_-|ATP-dependent-Clp-protease,-ATP-binding-subunit-ClpX
MANKKKNYCSFCGREEHEVERLIQSPEEDGVFICNECIEDSAELLDSFREYDENEHNREITLLKPKEIKAKLDEYIIGQEQPKKVLSVAVYNHFKRIMHKQKNVDNDVELQKSNVLLVGPTGSGKTLLAQTLAKTLNVPLAIADATTLTEAGYVGDDVENVLLKLIKAADYDIEAAEHGIIYIDEIDKIARKSENMSITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPNQEMIEINTKDILFIVGGAFEGLEAKVKDRVNEKRVGFGLETNNTKLDDLTLFENVLPEDLIKFGLIPELIGRLPVITALHGLDEEAMIKILTEPKNSLVKQYKKYFEMENVDLEFEKDAITEIAQLALKRKIGARGLRSIIESVMTDLMYEIPSKDNVKKVIITKEAVTDKEKVIVE
>CP001685.1|ACV39199.1|1389071_1391468_-|ATP-dependent-protease-La
MQNKPFIATRELVVFPGVVTPIFIGRQLSLKSLEKAIERFDNKLILSAQKDANVEEPKFPEDVYETGVLVHVIQTVKMPNGNVKVLVEAKHRVLINQFPKDDKGVVYAEYEEIFSKPIDESKAEALKRRVIDEFSNYAQKTNKVLPDIIYNIKEISNIDKVFDLICTNLMIAVETKQELLETLDVEARAYKILGILEREIEIFILEREIENRVKEQMAEVQKNYYLREKIKVMREEMGEGSDSEEELEELDQRVQDARVPQDLKDKLVKELSRMKKMPDFSAESSVIRTYLETVLELPWEVSSNDEIDIEKAEKILNEDHYGLEEVKERILEFLAIKKLNNTLKGSIICLVGPPGVGKTSLAHSVARSMNRKFTRISLGGVRDEAEIRGHRRTYVGAMPGRIINSLKQVGVNNPVMLFDEIDKMASDFRGDPASAMLEVLDPAQNNSFEDHYIDHTFDLSNVFFICTANDLGGIPGPLRDRMEIISIESYTEFEKLNIAKRYLIPQTQEENGLKEFKISFSDKAIMKIINEYTREAGVRNLRREIGKLFRKIAKEILVSKSDSKKISVSEAKIKKYLGNAKFRVDKVKEKEGKIGVVNGLAWTAVGGTTLEVQAVKMEGKGILQLTGKLGDVMQESARVAYSYVRHIKNELGIKEKFNEITDVHLHFPEGAVPKDGPSAGITITTAIISVLTNKEVRQDVAMTGEITITGEVLAVGGIKEKVIGAHRVGIRDVVLPFDNKVDTEELPKEIADQMKFYFAKTYDDVKKVVFVNKDTKKVKKVVKKTMEKNSSKEENIQQ
>CP001685.1|ACV39209.1|1403993_1404533_+|Chromate-transporter
MKVYLELFWIFFKIGTFTLGGGYAMVPLIQNEIVNKKKWIEEEEFVKLLALAQSSPGALAVNVSVFVGYKMKRMLGLITTVLGATLPSFIIILIIASLFSNIQDNIYVIKAFKAIRPMVVALIAASVYTIGKSAKINKKTLWIVILVAAMVAFLKFPPIVMIILGAFLGNAWMIWRKNK
>CP001685.1|ACV39210.1|1404529_1405081_+|Chromate-transporter
MNLAILLILFFVFFKIGLFSFGGGYAILPLIQADVVDLHKWVNVQQFTDIVAISQVTPGPISLNAATYVGYLIGNKAGFWDAFIMGTAATLGLILPSVIIMTIFSKFYLKFQDNKYMDNAFTGLKIVVVGLILAAAIMLVDKNNFIDWKSAVIFVVSVALVLKWKVSPILLTVIAAIAGIIIY
>CP001685.1|ACV39211.1|1405162_1405894_+|Sel1-domain-protein-repeat-containing-protein
MKKKYIIVMLILILIFSCGKKKKRNNDVKSKATIEQKENNRIKELTEKARKGDVEAQTQLGEAYLHGIDTKIDYKKAMEWSKKAAAKGSSRAMTNVGILYFEGFGVKKDYKQAYKLFSDGVDGGDMKALKYLGTMYEKGLGVEKSFDSAAFYYEMADSSGDLTVRYNLGKIYEMAGDYAKAVELYQKTDGRMDQVTAPMYEALGDLYVNGKGVKKNLKEASEWYEKASKSGSQQAKNKLDKLK
>CP001685.1|ACV39212.1|1406111_1406729_+|Tetratricopeptide-TPR_2-repeat-protein
MLETLIFREIRYNGNNEQLLKENLSKIKDNPDDTEVLQTLASIYHALKENDKAIEIYEKLVKLEPEKSENWAFLGYLYYENEDLEKAEENFNRALDDNMDEPFVLFLLGNIYSRKGRIAEAVNCYDLAIFLDFDMYIAHIDFARKYEHMGRHEKALEEYRAAFRIDPRDEGLIEKIDYIENKCKNKKEKKKNGNLNFATANLGIV
>CP001685.1|ACV39213.1|1407076_1407904_+|PP-loop-domain-protein
MVNLVCEAILPDCPMKDVEEIEKSIVTTYKKSIWSKFLKAINDFDMIQDGDKIAIGVSGGKDSLLLVKLFQELKKDRRKNFDFKAVSLNPGFRNSDLDNFKNNLDKLNIDCEIIDTNIWEIANEKAKDYPCFLCAKMRRGILYTQVEELGFNKLTLGHHFDDVIETTLINMFYAGTMKTMTPKVPSTSGKLELIRPLIYVKEADIIDYTKTNGIRAMNCGCTIEAGKTSSKRKEVKDLLAALEEKNPGIKQSVFNSMKNINLDYVFGYTGGKEVK
>CP001685.1|ACV39214.1|1408046_1409741_+|alpha,alpha-phosphotrehalase
MKKIFEPKWWHKSVVYQIYPKSFNDTTGSGEGDIKGIIEKLDYLKELGIEVIWITPMYKSPQNDNGYDISDYYDIDPNYGTMADFEKMLSESHKRGLKIVMDIVVNHSSTENEWFKKSEAGDPEYKDFYIWKDAVDGKEPTNWESKFGGNAWKYSEKRGQYYLHLFDVTQADLNWENENVRKKVYEMIKFWLNKGVDGFRLDVINLISKDQRFLSDDGTDTRFVPDGRRFYTDGPRIHEFLKEMNREAFGGGELITVGEMSSTSLENCIKYSNPDEKELSMAFSFHHLKVDYPNGEKWVKAPFDFVQLKKIFSKWQIGMYEGNGWNATFWNNHDQPRALSRFGNDKEYHNESAKMLATVLHGLQGTPYIYQGEEFGMTNPYFDNISKYRDVESTNNYKILLDKGYSEEEAIEILMQKSRDNSRTPVQWDDSENAGFTTGTPWIGIPENYKKINAEAALKDKNSVFHHYKKLIDLRRNEELMITGRYEDIDLENKNVYAYKRVGENGELVVISNFYEPEVEFELEGNRVIGLENAQVLLSNYETAPEIRDGKIILKPYESIIFKK
>CP001685.1|ACV39215.1|1409846_1410617_+|molybdopterin-binding-domain-protein
MKTEIICVGTELLVGDIVNTNAQYISAKLTNIGIDLYYQTTVGDNYGRLMECLKNAFKRVDLVITTGGLGPTVDDITKEVVADYFGEELEMIERYYDLIVKKYNARGFGEVASGGKKEASILKNSKLLENEVGLAPGFFYEKDNKKIIVLPGPPREMTWMVDNQVLPFLKQYSNDILLMKTLEIKGVPEGKIDDRLKDYFEMSNPTVAPYAKEGCVHVRIAMKGDRGSTDYLIAEIDKIASEIIEIYPQAVEIKED
>CP001685.1|ACV39216.1|1410650_1411457_+|Tubulin/FtsZ-GTPase
MDNAVIKVVGIGTAGNEVLNKIAHRKISGVEIARIDTNQENFNKEVEVVLQNSDLVFILMEMSEKKNNEITGIVAQTAKTKGILTITVAVTSVNSNGETEEIEKLKEVSDTVIVLPLKKLAEADPSTTFDKIFEKRDESFIKNVEFIANVINKQGVVNLDLDDVKKMLKDSKTAVTVFGKGEGQDRIKLILEQLSNYPFSKNLSKKARKIMINIVGGADIGLQEIQEIVQKTFQKFGSDKTGVLWGYNMNPEVEEEIEVGILMTDFSD
>CP001685.1|ACV39217.1|1411805_1412093_-|hypothetical-protein
MKKIIFTFLILGNVYNFAAQKTLRTVEKCRVTSKGTTKDGKRFANCISLQSGKTFNFTGLVDQTYYKFSKGTIFKVYFYGNGNRNLTLETFDYIR
>CP001685.1|ACV39218.1|1412189_1412792_-|hypothetical-protein
MKKVLFIFLTILMFLSCAMKSDNQKNNENPENEISENKNSSVQQVPENNSFQKSDVIQDTNNGRFGNETVGFMNYPKGNWNEIQNNTNSTSAGIKNDENEMIILDKVPSEERVNAGKAATQMIAELVNQGQKKENLKLYQNSINGHQAYLIFSETVNNNNLQASMIFIDAENEVYYVAVIAKPNNITKLLEIVTSSWNIR

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Crispr_ID: CP001685_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP001685_5

1432118-1432217

TypeV

Consensus_repeat	Method
GTTATATAACTCCGAGAGGAGACGGA	CRISPRCasFinder

1 spacers

cas14j

The CRISPR arrays of CP001685_5

>merge|CP001685|5|1432118-1432217|CRISPRCasFinder
GTTATATAACTCCGAGAGGAGACGGATACTTTCTAAGATCAAATTCTAAGTTTGTATGGTTATCGAACAAGTCTAGTTATATACTCCGAGAGGAGACGGA

>CP001685|5|5|1432118-1432217|CRISPRCasFinder
GTTATATAACTCCGAGAGGAGACGGA	TACTTTCTAAGATCAAATTCTAAGTTTGTATGGTTATCGAACAAGTCT
AGTTATATACTCCGAGAGGAGACGGA

Protein	Signature genes	Signature genes Name	Protein_function
CP001685.1\|ACV39243.1\|1430176_1431529_-\|Aspartyl-aminopeptidase	unknown	unknown	gnl\|CDD\|235073
CP001685.1\|ACV39244.1\|1432595_1433480_-\|dihydrodipicolinate-synthase	unknown	unknown	gnl\|CDD\|235107
CP001685.1\|ACV39242.1\|1429783_1429918_-\|hypothetical-protein	unknown	unknown	unknown
CP001685.1\|ACV39240.1\|1428501_1428726_-\|hypothetical-protein	unknown	unknown	unknown
CP001685.1\|ACV39236.1\|1425203_1425800_+\|Abortive-infection-protein	unknown	unknown	gnl\|CDD\|376806
CP001685.1\|ACV39252.1\|1443651_1445931_-\|hypothetical-protein	unknown	unknown	unknown
CP001685.1\|ACV39253.1\|1445945_1447046_-\|ATPase-associated-with-various-cellular-activities-AAA_5	unknown	unknown	gnl\|CDD\|336785
CP001685.1\|ACV39237.1\|1425859_1426471_-\|Propeptide-PepSY-amd-peptidase-M4	unknown	unknown	gnl\|CDD\|225753
CP001685.1\|ACV39251.1\|1442393_1443575_-\|VWA-containing-CoxE-family-protein	unknown	unknown	gnl\|CDD\|283431
CP001685.1\|ACV39245.1\|1433607_1434459_-\|diaminopimelate-epimerase	unknown	unknown	gnl\|CDD\|234768
CP001685.1\|ACV39249.1\|1439914_1440793_-\|conserved-hypothetical-protein	unknown	unknown	gnl\|CDD\|379777
CP001685.1\|ACV39247.1\|1435774_1437085_-\|diaminopimelate-decarboxylase	unknown	unknown	gnl\|CDD\|143501
CP001685.1\|ACV39241.1\|1428716_1429415_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|313994
CP001685.1\|ACV39250.1\|1441070_1442168_-\|transposase,-IS605-OrfB-family	cas14j	-	gnl\|CDD\|223747
CP001685.1\|ACV39239.1\|1427818_1428502_-\|two-component-transcriptional-regulator,-winged-helix-family	unknown	unknown	gnl\|CDD\|223816
CP001685.1\|ACV39238.1\|1426467_1427832_-\|histidine-kinase	unknown	unknown	gnl\|CDD\|223715
CP001685.1\|ACV39246.1\|1434523_1435741_-\|aspartate-kinase	unknown	unknown	gnl\|CDD\|235843
CP001685.1\|ACV39235.1\|1424451_1424970_-\|hypothetical-protein	unknown	unknown	unknown
CP001685.1\|ACV39248.1\|1438018_1439386_+\|MATE-efflux-family-protein	unknown	unknown	gnl\|CDD\|240543
CP001685.1\|ACV39234.1\|1423673_1424207_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP001685.1\|ACV39243.1\|1430176_1431529_-\|Aspartyl-aminopeptidase	gnl\|CDD\|235073	PRK02813, PRK02813, putative aminopeptidase 2; Provisional.	0
CP001685.1\|ACV39244.1\|1432595_1433480_-\|dihydrodipicolinate-synthase	gnl\|CDD\|235107	PRK03170, PRK03170, dihydrodipicolinate synthase; Provisional.	8.79963e-162
CP001685.1\|ACV39237.1\|1425859_1426471_-\|Propeptide-PepSY-amd-peptidase-M4	gnl\|CDD\|225753	COG3212, COG3212, Predicted membrane protein [Function unknown].	1.58042e-08
CP001685.1\|ACV39236.1\|1425203_1425800_+\|Abortive-infection-protein	gnl\|CDD\|376806	pfam02517, Abi, CAAX protease self-immunity. Members of this family are probably proteases (after a isoprenyl group is attached to the Cys residue in the C-terminal CAAX motif of a protein to attach it to the membrane, the AAX tripeptide being removed by one of the CAAX prenyl proteases). The family contains the CAAX prenyl protease. The proteins contain a highly conserved Glu-Glu motif at the amino end of the alignment. The alignment also contains two histidine residues that may be involved in zinc binding. While they are involved in membrane anchoring of proteins in eukaryotes, little is known about their function in prokaryotes. In some known bacteriocin loci, Abi genes have been found downstream of bacteriocin structural genes where they are probably involved in self-immunity. Investigation of the bacteriocin-like loci in the Gram positive bacteria locus from Lactobacillus sakei 23K confirmed that the bacteriocin-like genes (sak23Kalphabeta) exhibited antimicrobial activity when expressed in a heterologous host and that the associated Abi gene (sak23Ki) conferred immunity against the cognate bacteriocin. Interestingly, the immunity genes from three similar systems conferred a high degree of cross-immunity against each other's bacteriocins, suggesting the recognition of a common receptor. Site-directed mutagenesis demonstrated that the conserved motifs constituting the putative proteolytic active site of the Abi proteins are essential for the immunity function of Sak23Ki - thus a new concept in self-immunity.	2.28934e-13
CP001685.1\|ACV39253.1\|1445945_1447046_-\|ATPase-associated-with-various-cellular-activities-AAA_5	gnl\|CDD\|336785	pfam07728, AAA_5, AAA domain (dynein-related subfamily). This Pfam entry includes some of the AAA proteins not detected by the pfam00004 model.	6.33431e-45
CP001685.1\|ACV39251.1\|1442393_1443575_-\|VWA-containing-CoxE-family-protein	gnl\|CDD\|283431	pfam05762, VWA_CoxE, VWA domain containing CoxE-like protein. This family is annotated by SMART as containing a VWA (von Willebrand factor type A) domain. The exact function of this family is unknown. It is found as part of a CO oxidising (Cox) system operon is several bacteria.	2.68673e-33
CP001685.1\|ACV39245.1\|1433607_1434459_-\|diaminopimelate-epimerase	gnl\|CDD\|234768	PRK00450, dapF, diaminopimelate epimerase; Provisional.	1.23186e-98
CP001685.1\|ACV39249.1\|1439914_1440793_-\|conserved-hypothetical-protein	gnl\|CDD\|379777	pfam16138, DUF4846, Domain of unknown function (4846). This family consists of uncharacterized proteins around 260 residues in length and is mainly found in various Bacteroides species. The function of this family is unknown.	1.24737e-143
CP001685.1\|ACV39247.1\|1435774_1437085_-\|diaminopimelate-decarboxylase	gnl\|CDD\|143501	cd06828, PLPDE_III_DapDC, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Diaminopimelate Decarboxylase. Diaminopimelate decarboxylase (DapDC, EC 4.1.1.20) participates in the last step of lysine biosynthesis. It converts meso-2,6-diaminoheptanedioate to L-lysine. It is a fold type III PLP-dependent enzyme that contains an N-terminal PLP-binding TIM-barrel domain and a C-terminal beta-sandwich domain, similar to bacterial alanine racemases. DapDC exists as homodimers with active sites that lie at the interface between the TIM barrel domain of one subunit and the beta-sandwich domain of the other subunit. Homodimer formation and the presence of the PLP cofactor are required for catalytic activity.	2.69199e-158
CP001685.1\|ACV39241.1\|1428716_1429415_-\|hypothetical-protein	gnl\|CDD\|313994	pfam10947, DUF2628, Protein of unknown function (DUF2628). Some members in this family of proteins are annotated as yigF however currently no function is known.	0.000321744
CP001685.1\|ACV39250.1\|1441070_1442168_-\|transposase,-IS605-OrfB-family	gnl\|CDD\|223747	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	8.50038e-49
CP001685.1\|ACV39239.1\|1427818_1428502_-\|two-component-transcriptional-regulator,-winged-helix-family	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	7.00673e-87
CP001685.1\|ACV39238.1\|1426467_1427832_-\|histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	4.84751e-56
CP001685.1\|ACV39246.1\|1434523_1435741_-\|aspartate-kinase	gnl\|CDD\|235843	PRK06635, PRK06635, aspartate kinase; Reviewed.	0
CP001685.1\|ACV39248.1\|1438018_1439386_+\|MATE-efflux-family-protein	gnl\|CDD\|240543	cd13138, MATE_yoeA_like, Subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins similar to Bacillus subtilis yoeA. The integral membrane proteins from the MATE family are involved in exporting metabolites across the cell membrane and are responsible for multidrug resistance (MDR) in many bacteria and animals. A number of family members are involved in the synthesis of peptidoglycan components in bacteria.	3.39205e-107

>CP001685.1|ACV39243.1|1430176_1431529_-|Aspartyl-aminopeptidase
MIHTTKELEEIQKNFIEMEVKSFAREVIEFIDESPSTYHVVKNCSDILDENGFERIMPREKWEIKKGGKYFFKKSSSTIIAFTVGENFDVKKGFKIFGAHTDSPCFRIKPNPEIVTENIVRLNTEVYGGPILSTWFDRPLSIAGRVIVKGEDPFFPKTVKIKIDEPLLTIPNLAIHQNREVNNGVKIDKQNDVLPVISLINKNFEKKGYLERVILEKTGIKKEDIIDFDLYLYATEKGCLLGVNEEFMSSPKLDNLASVYTGIIGLVEAEENQDRINIFVAFDNEEIGSATKQGADSNYLLNTLERISLALGLDRSDFLQMLESSYILSADAAHAAHPAHLGKTDPTNRGKINEGISIKISAKQKYTSDGYSIAVIRHLIEGTEIRIQPFVNESNELGGSTIGPISSTHLDIDGVDLGVPMLAMHSVRELCGIFDVFYLKELAKEFFSKR
>CP001685.1|ACV39242.1|1429783_1429918_-|hypothetical-protein
MKKITFYLKDNFKYSNVLLITLEDFLGTLSKWKNSKNFMKISIW
>CP001685.1|ACV39241.1|1428716_1429415_-|hypothetical-protein
MKQVDGKRAVLENGVLRKEVKFGFSWGAFFLGFIYPLIKGDYMVAGISFAVIGVASMIFFPLIFVLSMVFGFLYNKMYVRMLIKQGWHPFTEEDAQVLRMNRILFNDKNNSYENNRERMAKEVEYYEMQPSEKTEVIEFKKSDSGNDFYDTSNNSMDNMNTDNFHNGNPNVPKMNYKNRTIQKFVARLIGGGFVSLVLGVFTANIILILLGAGLTGGGTFLAVKNKDKIKWK
>CP001685.1|ACV39240.1|1428501_1428726_-|hypothetical-protein
MEIRKYLIESENYRNLIKKFFILSMFLMVFMRYNKDELFTESLKKCEKKIGMEQLKLFCEKNQCTLMETEESER
>CP001685.1|ACV39239.1|1427818_1428502_-|two-component-transcriptional-regulator,-winged-helix-family
MRLLVVEDEKKLNGLITKKLEKEYYGVDSCFDGEEAIRYVEGTEYDAIILDIMLPKLDGFEVIKRIRAKKNKVPILLLTARDNIDDKVKGLDYGADDYLVKPFIFEELMARIRVLLRRNSGNADNVITVANLKVDLDAKTVFRDGVLIKLSGREYSILEYLIRNKGKILPRERIEDHIWNYEYEGGTNVIDVYIRYLRKKIDDSYTPKLIHTIRGLGYVLRVDNENE
>CP001685.1|ACV39238.1|1426467_1427832_-|histidine-kinase
MKMNKLSIKSKITFWYIGLMISLIVIFLITIIYISENLVRADAYKNLKSSVVSAFDEIEVYDGELTIDNDFIIFNNNVHLSVYDDETGFIYGDIPLDFEYDETFSDKNDVRIIKHKNKKWYIFDSKKNFSGYGIIHIRGIAPATEVENVIETIVLISLIVLPFFLVFSAISGYFITKKAFKPIEKIREAVEKINEGNDLTQRINIGEGNDEIYTLANTFDTMFDRLQNSFEREAQFTSDVSHELRTPVAIIISECEYGLENLTSIENAKDTISSVLDETKKMSKLISQLLTLSRMDRGNQKLNFEKINISEMTHLIADSQQHNADSKNIKIHSEIEENIFIVGDETMIMRIFVNLISNAINYGRENGNIWIKLTQDKDFAICKVIDDGIGIEKENIPKIWGRFYQVESSRTTENLGLGLSMVKWIIEAHKGEIYAESEIGKGSSFIFKLKKERK
>CP001685.1|ACV39237.1|1425859_1426471_-|Propeptide-PepSY-amd-peptidase-M4
MKNNFLKKLLIVFFIIMTGVFANGNTGKKTKTVRVLNVDVKISIEQAKQLALNHSKVAKNSAKMTKIRLDKENRKFIYEIEFYTERKKYKYNIDANTGKVLSYSQKDRISASTTIRDNGKIINTNGSDTEIRKTPKYIGIEKAKEIAVARITGAKKINVTNIQLDSEKGRKIYEGRIVYKNTEYKFDIDAITGEVIKWEVNEH
>CP001685.1|ACV39236.1|1425203_1425800_+|Abortive-infection-protein
MEKNINKFKMEELGLLILNTACYSALVITSVIILLTVLSSLLSKKIILADYSKQSFEVNELLKFLVFYPIGEELLLRGLILQFLKKKTKYANLIQAVIFGILHLNPIKIIYTTISGIFFGNVRLRPSPIWWTILLHSTFNLVSIFLYKPFIITIEKIFYLQNMPIITLIIVFIPPLFIFDYTLKQLKNKFNYEKLYKA
>CP001685.1|ACV39235.1|1424451_1424970_-|hypothetical-protein
MKKIIVILAFIFSSLSFSAKQIEKIMCYIPKELKTNSKARLIYEDTEKYKDEEIPPEVANPEIVKALKERRLVVFQMRCKYDGDMYRYITASDYAVEYLTKQTINKEEGDYYLLELPTNKALAFQDMLFIGDFIDNSISTNDELFQILYMINVQFLEIRQQELEEEGLKVVY
>CP001685.1|ACV39234.1|1423673_1424207_-|hypothetical-protein
MEMNSRNRYFKKEITLSKEEEIKIVKIGFSWVTFFFGFLVPFYRKDWNTGWMLLTIMVISHMMLPLLMFLILVVFSFLYNRIYINMLLKSGWGFATKDDEILWENKKEMAEKVDNMVLKLKEMEAKIDRKIEEHGFVKKFAWGGTYALAIGILIKNTPLLAVGIVFFVISFIKRQKM
>CP001685.1|ACV39244.1|1432595_1433480_-|dihydrodipicolinate-synthase
MKFEGSYVALITPFKNNGMELDEDKLRELVNYHIENGTSGIVPCGTTGEAPTLTFAEHEKVIKIVVEEVRGRIQVVAGAGSNSTTRAIELTKYAKELGADAALSTCPYYNKPSQRGLYEHYKTIAQEAKFPIMLYNVPGRTGTNIEAETIAKLAELPEIVAVKEATGSLEQMIRIQDLCGDKIEILSGEDHLILPMLSIGAKGVVSVVANIMPQEMSDLISSFLNKNFDKAFELHTKLYDVSRNMFVEGNPVTVKAAMKILGKMDNDIVRLPLVAAEADTYGKLTKVFKEKGIL
>CP001685.1|ACV39245.1|1433607_1434459_-|diaminopimelate-epimerase
MLKFEKYQGAGNDFVIVAEKDLIEKGIPEYGEFASQVCDRHFGIGADGLIILKYVASMPFMFFFNADGSQAPMCGNGIRCFSNYLVNNHLVEGNEFVVKTVPGDLTIKVNYDEEKDDFSARVNMGKPVFNVKELINTEKEQFLREKINIDGKEIEISYIFMGTDHSVIFVNDFNDYNIDEFGKKIENYINLFPKKVNVNFVKVYNREHMEVITWERGAGRTLACGTGATASAVLAKTFGFVDTKVNVKVPGGQLVIEYEGGENDAFMTGPSEKIAEGLYKYQR
>CP001685.1|ACV39246.1|1434523_1435741_-|aspartate-kinase
MIIVHKYGGTSVATTEKIMNIAKYLGSVKDAGNDVVVVVSAMGKTTDALIKLAREITDKPDSREMDRLMSTGEQQTIALLSIALQTLGYEAISLTGAQAGIKTSGHYTKNKIADINGKEIKEHLSQGKIVVVAGFQGINEAGDVTTLGRGGSDTSAVALAAALGGKCEIYTDVDGIYTIDPRVYKKAKKLPVISYDEMMELAFLGAGVMEPRAVELGSKYGVEIYVGKSLGEKNGTIITSVEKVKENKEMEEKVITGVSINENMVMVNVEEITTNAQNIYEIFEKAEASGINIDMISQNDVTSHHGSFAFTCPKTDIAALEKIGEEIESEFPQTSFIINPYVTKVSIVGIGLISNIGVAAKMFKTLAENDISFHQISTSEISISLVVDEVMGKRIAELFAKEFDL
>CP001685.1|ACV39247.1|1435774_1437085_-|diaminopimelate-decarboxylase
MKLFGTSKVNEKGNLSIGGVDTTELVKEFKTPLYVMDQEFIETTIDKMKKAFKSSRFNTRIAYAGKAFLSTGMIKLVESKGLDLDVVSGGELYTAYKAGFPMNKVHLHGNNKLVNEIEMAVDFGIDTIVVDNEDEIDKIERICREKGKKQAVLVRIDPGIEAHTHHYIKTSGLTSKFGISLFQDNLFDIIKRLNDSEWIEFKGFHTHIGSQIFQSAFFIFALDEIFKYLDKLKKELGIVVHTVNMGGGFGVYYKEGDDPKPIEEVLSEIITYTEAMEIKYQIGFKELCIEPGRSIVGNAGTTLYEVGGIKETVGGKTYVFIDGGMSDNIRTALYQAEYEAGVVNKINDTDVKDVTLAGKLCESGDIIIEKGKLPKSTEVGDIVAVTTTGAYCYTMSSNYNRMMRPAVVFVKDGKAKVAVKRETLDDLIRNDEIFEL
>CP001685.1|ACV39248.1|1438018_1439386_+|MATE-efflux-family-protein
MLFKVQSNEERRKMILNGKVINTLLFLSVPTLLVGIIQALIPLSDSLFLNRLTSVEVASSVTFSQPVLNIMIALSQGLGVATLVMLGRLYGKGRMLALKETMLQIFVFSFIIGLFLIPVCVFSAFVISKYTTSEIRDNVYIYISLYSLIMPFVFLAAIYNSSKNAIGRPEITFIRIFLLLILKIIFNSIFLYALKMGITGAVMASLFSYVIVTIWMFYDLFLKNGDIKLNLRSYSVKLPIIKRLLKIGLPSMLNYAFLYLGFFLINKEMEKFGAIALNAQGIASNINAICFILPSSIGTTVSSMISINMGVGNIKKSKEVFNVGWLTGVTISVLTICLILPISSTLVLTFTKVPKVIEIADKALHIYTYSVIGFSIFMISQGVFIALGRTKVPLVMSILRIWLLRYIFILVTQKYLGLYSIFWGNLFSNTLAGIIFFILVKIINWKKGGISELGK
>CP001685.1|ACV39249.1|1439914_1440793_-|conserved-hypothetical-protein
MFFLKEKKSWKLLAGVSLLIIFQFACSNEVKDKSKEINSERNIKSEKLINSGGMTIETRYGVPQGYKRIAVEKGSFAEFLRNQKLKPYGEKVQYFNGNYKRSEGIYDSVFDVEIGDRDLHQCADAIMLLRAEYFYRKKEYNKINFKFVTGFNAQYSKWMQGYRINPNGKGSYYKKSAPSNTYKDFRNFMNIVFGYAGTLSLEKEMIPQKIENMQIGDVFIMGGSPGHAVIVVDMAENEKGEKIFMLAQSYMPAQQTQILVNPENGGVWYSLKRKDVLVTPEWKFPIEKLRKF
>CP001685.1|ACV39250.1|1441070_1442168_-|transposase,-IS605-OrfB-family
MKYNLAFKYRIYPNKEQELLINKTFGCVRFVYNTILYTANKIYEKTGKNKIITPASLKSENQFLKEVDSLALSNAQLNVKRSFTNFFQKRAKFPKFKSKKNNIKSYTTNCVNNSIRIEENEYLVLPKLKKVKLKYHREIPKDYKIKSVTLTNSNGNYYVSVLTEFEKKIQKMPSNDKVIGLDFSMSELFVSSENQRADYPKYFRMLEKKLKKLQKSLSRKVKFSKNWYKQRSKISKLHEYIKNCRRDFLHKLSKKLSEEYNAVVVEDLNMKGMSQTLNFGKSVGDNGWGMFLRMLEYKLMFLGKQFLKIDKWFPSSKTCSKCGNVKEELKLSERSYKCECCGIEIDRDYNAALNIKNIGKEMLKY
>CP001685.1|ACV39251.1|1442393_1443575_-|VWA-containing-CoxE-family-protein
MDYKENIKRWRLILGKDTEEEFSSMDSEAIPSFTEEDWLMDKALDTIYNPTGQFMGGDSAGQGPSNPQISRWLGDVRTLFDKELVKIIQTDAMERCGLKQLLFEPEILDQVEPNINLASTIMLLKEQIPQKSKESVRNFIKKIVEEINKLLESDIRRAVRAALNKKQHSPIPSASSLDFKTTIRRGIKNYNRELKKIVPEHYYFFERASVNPTSKFTVILDIDQSGSMGESVIYSSVMACILASIASLKTRVVAFDTEIVDLTEKSDDPVDLLYGFQLGGGTNINKSIKYCTKYIENPKKTIFFLISDLIEGRNRGEMLRRLQEMKDSGVIVVCLLAISGDGKPYYDSQMSGKIASLGIPCFACNPEKLPLLLERVLKNMDLSSFEKEFEKKK
>CP001685.1|ACV39252.1|1443651_1445931_-|hypothetical-protein
MKKQNEGKPNIFGVRHFSPAGVHYLKNYLDEIQPKIVLIEGPSDFNDLISEITGKNIVPPIAVMAYTLEAPIQTIVYPFAEFSPEYQAILWAKENGVECRFCDLPSSIFLGVESVKKNLDENPEENLNAYIYRKINEYSEDSDDEVFWERVVEQASDYRAYRSGARDYGKYLRELTLSNTVSDAKNIIRESYMCKVVSDVCKEGYKMDEIAMVVGAFHVEGIESGKLILTEKEIKKLPKLESKKTLMPYSYYKLSSYSNYGAGNKAPGYYEFLWNGLEKGDSLFATYMYLSKIAEYQRENGNMISSAQIIEAVHLATSLANLHDGKIPTLKDIKDAAITCMAHGSYSELVLAMANVEVGKKIGSIPKEAIQTSIQSDFYNLLKELKLEKYRSLTATEIKLDLREKLRVQSEKLAFMDLERSFFFHKLRVLNISFAKLIGNRQENTTWAEEWILQWKPETEIEIVETILKGDTIEFATAFELMQRIEGAKTLSEMAEIVKDAFYCGMPKALEKAFQALQNFITGDVPIDEIAKTMSTLSLMLRYGDIRKLDTKVLIPILEQLFLRVCLILPSESFCDNNAAVELAKSIMIMHTVVENYDFLDRERWYSLLLEISKRDDLNTKISGLAMAILLEAGKIDNEVLGKEVEKRLSKGVPADLGATWFEGLSMKNHYTLIARLGLWKKLQNYISNLDEEEFKRALLFLRRAFADFTSNEKHDIAENIAEIWGLNKNDVSAVINDDLGENEKEIIAGLEEFDFDDI
>CP001685.1|ACV39253.1|1445945_1447046_-|ATPase-associated-with-various-cellular-activities-AAA_5
MAKKEELQRLTAEQMFQDEIDALIKAEKNPIPTGWKMSPKSVLTYICGGKAGRKVITPKYIGNKRLVEIAISTLVTDRALLLIGEPGTAKSWLSEHLTAAINGDSTRVIQGTAGTTEEQIRYSWNYAMLIAEGPTKDALIPSPIYKAMEDGAIARVEEISRCASEVQDALISLLSEKRMSVPELNVEIPAKKGFSIIATANTRDKGVNEMSAALKRRFNIVVLPSPNTLEAEIDIVRSRVTQLAGNLDLNAKLPEEEVIEKVCTVFRELRQGVTLDGRQKIKPTANVLSTAEAISLLANSMALAGSFGDGEISDYDLAAGLQGAVVKEDSKDGQIWEEYLENIMKKRGSEWLDLYKECKALNKATK

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Crispr_ID: CP001685_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP001685_6

1616840-1617772

Orphan

I-B

Consensus_repeat	Method
GTTTCAATCCTTGTTTTAATGGATACTCTACTTTAAC	PILER-CR
GTTTCAATCCTTGTTTTAATGGATACTCTACTTTAAC	CRISPRCasFinder
GTTTCAATCCTTGTTTTAATGGATACTCTACTTTAAC	CRT

12 spacers

The CRISPR arrays of CP001685_6

>merge|CP001685|6|1616840-1617772|PILER-CR,CRISPRCasFinder,CRT
GTTTTTATCCTTGTTTTAATGGATACTCTACTTTAACTTTTAACAGGATGGACTGAATGGAACGCTGCTGAATGTGGTTTCAATCCTTGTTTTAATGGATACTCTACTTTAACTTGTCTACCATTATACATTTGTTTCCATCTCACATCTGTTTCAATCCTTGTTTTAATGGATACTCTACTTTAACGATTTGAGAATTTTATGTTATGTAAAAGAACTTTTGAAGTTTCAATCCTTGTTTTAATGGATACTCTACTTTAACGAATTCCATTTTCACGACAAAGTTTACTACAGATACGAGTTTCAATCCTTGTTTTAATGGATACTCTACTTTAACTATTATACTTCAGATAAGAAAGGTGAGATGAGAAAGACTTGTTTCAATCCTTGTTTTAATGGATACTCTACTTTAACACCAGTGGTACAAGGATATGGACAACAACAAGTATGTTTCAATCCTTGTTTTAATGGATACTCTACTTTAACCTGATTTAACTTTTGCTGTATTAACATCACTTACCGTATGTTTCAATCCTTGTTTTAATGGATACTCTACTTTAACAAATGACATAAAAAATGATCGAGACATCAAAAGATTAAGTTTCAATCCTTGTTTTAATGGATACTCTACTTTAACTAGAAGACATACCAGAAGTTGGAAAATTTTGGATGGGTTTCAATCCTTGTTTTAATGGATACTCTACTTTAACTAAACAAGATGTCCTTTATAATACCGTATCATTCTTTGTTTCAATCCTTGTTTTAATGGATACTCTACTTTAACACAATTGGTCTACAAAATAAAATTTAGGTTTATGCTTTGTTTCAATCCTTGTTTTAATGGATACTCTACTTTAACACACATTACAAGTAGACGGTATAGAATTAGATCCTGAAATTCAATCCTTGTTTTAATGGATACTCTACTTTAAC

>CP001685|6|4|1616840-1617772|PILER-CR
GTTTTTATCCTTGTTTTAATGGATACTCTACTTTAAC	TTTTAACAGGATGGACTGAATGGAACGCTGCTGAATGTG
GTTTCAATCCTTGTTTTAATGGATACTCTACTTTAAC	TTGTCTACCATTATACATTTGTTTCCATCTCACATCT
GTTTCAATCCTTGTTTTAATGGATACTCTACTTTAAC	GATTTGAGAATTTTATGTTATGTAAAAGAACTTTTGAA
GTTTCAATCCTTGTTTTAATGGATACTCTACTTTAAC	GAATTCCATTTTCACGACAAAGTTTACTACAGATACGA
GTTTCAATCCTTGTTTTAATGGATACTCTACTTTAAC	TATTATACTTCAGATAAGAAAGGTGAGATGAGAAAGACTT
GTTTCAATCCTTGTTTTAATGGATACTCTACTTTAAC	ACCAGTGGTACAAGGATATGGACAACAACAAGTAT
GTTTCAATCCTTGTTTTAATGGATACTCTACTTTAAC	CTGATTTAACTTTTGCTGTATTAACATCACTTACCGTAT
GTTTCAATCCTTGTTTTAATGGATACTCTACTTTAAC	AAATGACATAAAAAATGATCGAGACATCAAAAGATTAA
GTTTCAATCCTTGTTTTAATGGATACTCTACTTTAAC	TAGAAGACATACCAGAAGTTGGAAAATTTTGGATGG
GTTTCAATCCTTGTTTTAATGGATACTCTACTTTAAC	TAAACAAGATGTCCTTTATAATACCGTATCATTCTTT
GTTTCAATCCTTGTTTTAATGGATACTCTACTTTAAC	ACAATTGGTCTACAAAATAAAATTTAGGTTTATGCTTT
GTTTCAATCCTTGTTTTAATGGATACTCTACTTTAAC	ACACATTACAAGTAGACGGTATAGAATTAGATCCTGA
AATTCAATCCTTGTTTTAATGGATACTCTACTTTAAC

>CP001685|6|6|1616840-1617772|CRISPRCasFinder
GTTTTTATCCTTGTTTTAATGGATACTCTACTTTAAC	TTTTAACAGGATGGACTGAATGGAACGCTGCTGAATGTG
GTTTCAATCCTTGTTTTAATGGATACTCTACTTTAAC	TTGTCTACCATTATACATTTGTTTCCATCTCACATCT
GTTTCAATCCTTGTTTTAATGGATACTCTACTTTAAC	GATTTGAGAATTTTATGTTATGTAAAAGAACTTTTGAA
GTTTCAATCCTTGTTTTAATGGATACTCTACTTTAAC	GAATTCCATTTTCACGACAAAGTTTACTACAGATACGA
GTTTCAATCCTTGTTTTAATGGATACTCTACTTTAAC	TATTATACTTCAGATAAGAAAGGTGAGATGAGAAAGACTT
GTTTCAATCCTTGTTTTAATGGATACTCTACTTTAAC	ACCAGTGGTACAAGGATATGGACAACAACAAGTAT
GTTTCAATCCTTGTTTTAATGGATACTCTACTTTAAC	CTGATTTAACTTTTGCTGTATTAACATCACTTACCGTAT
GTTTCAATCCTTGTTTTAATGGATACTCTACTTTAAC	AAATGACATAAAAAATGATCGAGACATCAAAAGATTAA
GTTTCAATCCTTGTTTTAATGGATACTCTACTTTAAC	TAGAAGACATACCAGAAGTTGGAAAATTTTGGATGG
GTTTCAATCCTTGTTTTAATGGATACTCTACTTTAAC	TAAACAAGATGTCCTTTATAATACCGTATCATTCTTT
GTTTCAATCCTTGTTTTAATGGATACTCTACTTTAAC	ACAATTGGTCTACAAAATAAAATTTAGGTTTATGCTTT
GTTTCAATCCTTGTTTTAATGGATACTCTACTTTAAC	ACACATTACAAGTAGACGGTATAGAATTAGATCCTGA
AATTCAATCCTTGTTTTAATGGATACTCTACTTTAAC

>CP001685|6|4|1616840-1617772|CRT
GTTTTTATCCTTGTTTTAATGGATACTCTACTTTAAC	TTTTAACAGGATGGACTGAATGGAACGCTGCTGAATGTG
GTTTCAATCCTTGTTTTAATGGATACTCTACTTTAAC	TTGTCTACCATTATACATTTGTTTCCATCTCACATCT
GTTTCAATCCTTGTTTTAATGGATACTCTACTTTAAC	GATTTGAGAATTTTATGTTATGTAAAAGAACTTTTGAA
GTTTCAATCCTTGTTTTAATGGATACTCTACTTTAAC	GAATTCCATTTTCACGACAAAGTTTACTACAGATACGA
GTTTCAATCCTTGTTTTAATGGATACTCTACTTTAAC	TATTATACTTCAGATAAGAAAGGTGAGATGAGAAAGACTT
GTTTCAATCCTTGTTTTAATGGATACTCTACTTTAAC	ACCAGTGGTACAAGGATATGGACAACAACAAGTAT
GTTTCAATCCTTGTTTTAATGGATACTCTACTTTAAC	CTGATTTAACTTTTGCTGTATTAACATCACTTACCGTAT
GTTTCAATCCTTGTTTTAATGGATACTCTACTTTAAC	AAATGACATAAAAAATGATCGAGACATCAAAAGATTAA
GTTTCAATCCTTGTTTTAATGGATACTCTACTTTAAC	TAGAAGACATACCAGAAGTTGGAAAATTTTGGATGG
GTTTCAATCCTTGTTTTAATGGATACTCTACTTTAAC	TAAACAAGATGTCCTTTATAATACCGTATCATTCTTT
GTTTCAATCCTTGTTTTAATGGATACTCTACTTTAAC	ACAATTGGTCTACAAAATAAAATTTAGGTTTATGCTTT
GTTTCAATCCTTGTTTTAATGGATACTCTACTTTAAC	ACACATTACAAGTAGACGGTATAGAATTAGATCCTGA
AATTCAATCCTTGTTTTAATGGATACTCTACTTTAAC

Protein	Signature genes	Signature genes Name	Protein_function
CP001685.1\|ACV39408.1\|1620514_1621966_-\|amidophosphoribosyltransferase	unknown	unknown	gnl\|CDD\|235984
CP001685.1\|ACV39411.1\|1623341_1627148_-\|phosphoribosylformylglycinamidine-synthase	unknown	unknown	gnl\|CDD\|130916
CP001685.1\|ACV39407.1\|1620217_1620505_-\|YCII-related	unknown	unknown	gnl\|CDD\|225225
CP001685.1\|ACV39395.1\|1606794_1607061_+\|addiction-module-toxin,-RelE/StbE-family	unknown	unknown	gnl\|CDD\|224937
CP001685.1\|ACV39409.1\|1621986_1622706_-\|phosphoribosylaminoimidazole-succinocarboxamides-ynthase	unknown	unknown	gnl\|CDD\|181800
CP001685.1\|ACV39401.1\|1614157_1614949_-\|Endonuclease/exonuclease/phosphatase	unknown	unknown	gnl\|CDD\|197313
CP001685.1\|ACV39396.1\|1607260_1607602_-\|hypothetical-protein	unknown	unknown	unknown
CP001685.1\|ACV39400.1\|1612350_1613940_-\|PTS-system,-alpha-glucoside-specific-IIBC-subunit	unknown	unknown	gnl\|CDD\|273925
CP001685.1\|ACV39393.1\|1605986_1606484_+\|methylated-DNA/protein--cysteinemethyltransferase	unknown	unknown	gnl\|CDD\|234860
CP001685.1\|ACV39402.1\|1615207_1616698_+\|4-alpha-glucanotransferase	unknown	unknown	gnl\|CDD\|237738
CP001685.1\|ACV39410.1\|1622759_1623239_-\|phosphoribosylaminoimidazole-carboxylase,-catalytic-subunit	unknown	unknown	gnl\|CDD\|376377
CP001685.1\|ACV39406.1\|1619084_1620083_-\|phosphoribosylformylglycinamidine-cyclo-ligase	unknown	unknown	gnl\|CDD\|235439
CP001685.1\|ACV39405.1\|1618473_1619097_-\|phosphoribosylglycinamide-formyltransferase	unknown	unknown	gnl\|CDD\|187714
CP001685.1\|ACV39398.1\|1609964_1611287_-\|glycoside-hydrolase-family-4	unknown	unknown	gnl\|CDD\|133434
CP001685.1\|ACV39394.1\|1606568_1606805_+\|conserved-hypothetical-protein	unknown	unknown	gnl\|CDD\|227054
CP001685.1\|ACV39412.1\|1627590_1627944_-\|arsenate-reductase-and-related	unknown	unknown	gnl\|CDD\|239334
CP001685.1\|ACV39404.1\|1618293_1618446_-\|hypothetical-protein	unknown	unknown	unknown
CP001685.1\|ACV39397.1\|1607825_1609568_-\|alpha-amylase-catalytic-region	unknown	unknown	gnl\|CDD\|200472
CP001685.1\|ACV39399.1\|1611513_1612221_+\|transcriptional-regulator,-GntR-family	unknown	unknown	gnl\|CDD\|225099
CP001685.1\|ACV39403.1\|1618155_1618263_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP001685.1\|ACV39408.1\|1620514_1621966_-\|amidophosphoribosyltransferase	gnl\|CDD\|235984	PRK07272, PRK07272, amidophosphoribosyltransferase; Provisional.	0
CP001685.1\|ACV39411.1\|1623341_1627148_-\|phosphoribosylformylglycinamidine-synthase	gnl\|CDD\|130916	TIGR01857, FGAM-synthase, phosphoribosylformylglycinamidine synthase, clade II. This model represents a single-molecule form of phosphoribosylformylglycinamidine synthase, also called FGAM synthase, an enzyme of purine de novo biosynthesis. This model represents a second clade of these enzymes found in Clostridia, Bifidobacteria and Streptococcus species. This enzyme performs the fourth step in IMP biosynthesis (the precursor of all purines) from PRPP. [Purines, pyrimidines, nucleosides, and nucleotides, Purine ribonucleotide biosynthesis].	0
CP001685.1\|ACV39407.1\|1620217_1620505_-\|YCII-related	gnl\|CDD\|225225	COG2350, COG2350, Uncharacterized protein conserved in bacteria [Function unknown].	6.83779e-21
CP001685.1\|ACV39395.1\|1606794_1607061_+\|addiction-module-toxin,-RelE/StbE-family	gnl\|CDD\|224937	COG2026, RelE, Cytotoxic translational repressor of toxin-antitoxin stability system [Translation, ribosomal structure and biogenesis / Cell division and chromosome partitioning].	8.81232e-16
CP001685.1\|ACV39409.1\|1621986_1622706_-\|phosphoribosylaminoimidazole-succinocarboxamides-ynthase	gnl\|CDD\|181800	PRK09362, PRK09362, phosphoribosylaminoimidazole-succinocarboxamide synthase; Reviewed.	1.9791e-138
CP001685.1\|ACV39401.1\|1614157_1614949_-\|Endonuclease/exonuclease/phosphatase	gnl\|CDD\|197313	cd09079, RgfB-like, Streptococcus agalactiae RgfB, part of a putative two component signal transduction system, and related proteins. This family includes Streptococcus agalactiae RgfB (for regulator of fibrinogen binding) and related proteins. The function of RgfB is unknown. It is part of a putative two component signal transduction system designated rgfBDAC (the rgf locus was identified in a screen for mutants of Streptococcus agalactiae with altered binding to fibrinogen). RgfA,-C,and -D do not belong to this superfamily: rgfA encodes a putative response regulator, and rgfC, a putative histidine kinase. All four genes are co-transcribed, and may be involved in regulating expression of bacterial cell surface components. This family belongs to the large EEP (exonuclease/endonuclease/phosphatase) superfamily that contains functionally diverse enzymes that share a common catalytic mechanism of cleaving phosphodiester bonds.	3.26155e-102
CP001685.1\|ACV39406.1\|1619084_1620083_-\|phosphoribosylformylglycinamidine-cyclo-ligase	gnl\|CDD\|235439	PRK05385, PRK05385, phosphoribosylaminoimidazole synthetase; Provisional.	0
CP001685.1\|ACV39400.1\|1612350_1613940_-\|PTS-system,-alpha-glucoside-specific-IIBC-subunit	gnl\|CDD\|273925	TIGR02005, PTS-IIBC-alpha, PTS system, alpha-glucoside-specific IIBC component. This model represents a family of fused PTS enzyme II B and C domains. A gene from Clostridium has been partially characterized as a maltose transporter, while genes from Fusobacterium and Klebsiella have been proposed to transport the five non-standard isomers of sucrose. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	0
CP001685.1\|ACV39393.1\|1605986_1606484_+\|methylated-DNA/protein--cysteinemethyltransferase	gnl\|CDD\|234860	PRK00901, PRK00901, methylated-DNA--protein-cysteine methyltransferase; Provisional.	5.34904e-75
CP001685.1\|ACV39402.1\|1615207_1616698_+\|4-alpha-glucanotransferase	gnl\|CDD\|237738	PRK14508, PRK14508, 4-alpha-glucanotransferase; Provisional.	0
CP001685.1\|ACV39410.1\|1622759_1623239_-\|phosphoribosylaminoimidazole-carboxylase,-catalytic-subunit	gnl\|CDD\|376377	pfam00731, AIRC, AIR carboxylase. Members of this family catalyze the decarboxylation of 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR). This family catalyze the sixth step of de novo purine biosynthesis. Some members of this family contain two copies of this domain.	7.21564e-77
CP001685.1\|ACV39412.1\|1627590_1627944_-\|arsenate-reductase-and-related	gnl\|CDD\|239334	cd03036, ArsC_like, Arsenate Reductase (ArsC) family, unknown subfamily; uncharacterized proteins containing a CXXC motif with similarity to thioredoxin (TRX)-fold arsenic reductases, ArsC. Proteins containing a redox active CXXC motif like TRX and glutaredoxin (GRX) function as protein disulfide oxidoreductases, altering the redox state of target proteins via the reversible oxidation of the active site dithiol. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione via GRX, through a single catalytic cysteine.	1.52276e-58
CP001685.1\|ACV39398.1\|1609964_1611287_-\|glycoside-hydrolase-family-4	gnl\|CDD\|133434	cd05298, GH4_GlvA_pagL_like, Glycoside Hydrolases Family 4; GlvA- and pagL-like glycosidases. Bacillus subtilis GlvA and Clostridium acetobutylicum pagL are 6-phospho-alpha-glucosidase, catalyzing the hydrolysis of alpha-glucopyranoside bonds to release glucose from oligosaccharides. The substrate specificities of other members of this subgroup are unknown. Some bacteria simultaneously translocate and phosphorylate disaccharides via the phosphoenolpyruvate-dependent phosphotransferase system (PEP_PTS). After translocation, these phospho-disaccharides may be hydrolyzed by the GH4 glycoside hydrolases, which include 6-phospho-beta-glucosidases, 6-phospho-alpha-glucosidases, alpha-glucosidases/alpha-glucuronidases (only from Thermotoga), and alpha-galactosidases. Members of this subfamily are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.	0
CP001685.1\|ACV39394.1\|1606568_1606805_+\|conserved-hypothetical-protein	gnl\|CDD\|227054	COG4710, COG4710, Predicted DNA-binding protein with an HTH domain [General function prediction only].	0.00725477
CP001685.1\|ACV39405.1\|1618473_1619097_-\|phosphoribosylglycinamide-formyltransferase	gnl\|CDD\|187714	cd08645, FMT_core_GART, Phosphoribosylglycinamide formyltransferase (GAR transformylase, GART). Phosphoribosylglycinamide formyltransferase, also known as GAR transformylase or GART, is an essential enzyme that catalyzes the third step in de novo purine biosynthesis. This enzyme uses formyl tetrahydrofolate as a formyl group donor to produce 5'-phosphoribosyl-N-formylglycinamide. In prokaryotes, GART is a single domain protein but in most eukaryotes it is the C-terminal portion of a large multifunctional protein which also contains GAR synthetase and aminoimidazole ribonucleotide synthetase activities.	1.96165e-85
CP001685.1\|ACV39397.1\|1607825_1609568_-\|alpha-amylase-catalytic-region	gnl\|CDD\|200472	cd11333, AmyAc_SI_OligoGlu_DGase, Alpha amylase catalytic domain found in Sucrose isomerases, oligo-1,6-glucosidase (also called isomaltase; sucrase-isomaltase; alpha-limit dextrinase), dextran glucosidase (also called glucan 1,6-alpha-glucosidase), and related proteins. The sucrose isomerases (SIs) Isomaltulose synthase (EC 5.4.99.11) and Trehalose synthase (EC 5.4.99.16) catalyze the isomerization of sucrose and maltose to produce isomaltulose and trehalulose, respectively. Oligo-1,6-glucosidase (EC 3.2.1.10) hydrolyzes the alpha-1,6-glucosidic linkage of isomaltooligosaccharides, pannose, and dextran. Unlike alpha-1,4-glucosidases (EC 3.2.1.20), it fails to hydrolyze the alpha-1,4-glucosidic bonds of maltosaccharides. Dextran glucosidase (DGase, EC 3.2.1.70) hydrolyzes alpha-1,6-glucosidic linkages at the non-reducing end of panose, isomaltooligosaccharides and dextran to produce alpha-glucose.The common reaction chemistry of the alpha-amylase family enzymes is based on a two-step acid catalytic mechanism that requires two critical carboxylates: one acting as a general acid/base (Glu) and the other as a nucleophile (Asp). Both hydrolysis and transglycosylation proceed via the nucleophilic substitution reaction between the anomeric carbon, C1 and a nucleophile. Both enzymes contain the three catalytic residues (Asp, Glu and Asp) common to the alpha-amylase family as well as two histidine residues which are predicted to be critical to binding the glucose residue adjacent to the scissile bond in the substrates. The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase.	0
CP001685.1\|ACV39399.1\|1611513_1612221_+\|transcriptional-regulator,-GntR-family	gnl\|CDD\|225099	COG2188, PhnF, Transcriptional regulators [Transcription].	2.48808e-53

>CP001685.1|ACV39402.1|1615207_1616698_+|4-alpha-glucanotransferase
MFERSSGILLHPTSLPGKYGIGSLGKEAYKFVDFLKKANQRLWQIFPLGPTGYGDSPYQCFSTFAGNPYLIDFDLLIEQNLLAEEDLKGVDFGGNEEYIDYGAIYNQKYPLLRKAYENFKANENKELKEKLETFKAENSSWLDDYSLYISLKNHFNGLPWNEWEDDIRTRKEAAINKYKAELADEIEYNNFIQFLFFTQWNNVKKYANDNGIKIIGDIPIFVAVDSSDAWANPEIFLFDPELKPVKVAGVPPDYFSATGQLWGNPLYDWDKLKELNYKWWVDRVKANLSTCDIIRIDHFRGFDEYWAVPYGDKTAENGTWCPGPRTDLFNTIKNELGELPIIAEDLGTMTQGVIDLREATGFPGMKILGFAFDSKEENDYLPHTYTKNCVVYTGTHDNDTLIGWFTKANEDDKQFARNYLNSRSDNEIHWDAIRGAWSSVANMAIAPIQDFLGLGSEARINTPGLASGNWQWRLKDGVLTDELAERIAKLTKVYSR
>CP001685.1|ACV39401.1|1614157_1614949_-|Endonuclease/exonuclease/phosphatase
MKILTVNVHAWLEENQMEKIDILARTIAEKQYDVIAMQEVNQLMNNKIIFDDIREENYAWVLLETLQKYTDTDYYLHWSNSHIGFGKYNEGVAVITRHKIKAEDEFYCTFAQSVRTISARRIVSITINYEGQDIEFYSCHMNLPNCETEDMGKNIQTILNRTQNSNLKILMGDFNTDAIGNVAAYENILSQGLFDTYVMAEKKDDGITVDKSIHGWDNDKAKKRLDYIFSNKELKVKESKVIFNNKNKEIVSDHFGIEVKIEF
>CP001685.1|ACV39400.1|1612350_1613940_-|PTS-system,-alpha-glucoside-specific-IIBC-subunit
MMKKVQRFGGAMMAPVLLFAFTGIVVGLSSVFTNTEVMGKIAEEGTVWYNFWYVISEGGWTVFRQMPILFAIGLPISLATKTNARACMETFALYTTFNYFVAAILKVFYGIDAAKQVADKVTGYSAIGGVPTLDTNLFGGILIAALVVYLHNKYFDKKLPDFLGVFQGSVFVYIVGFVVMIPCAFLTVLIWPKFQMGISALQGFMKASGIFGVWIYTFLERILIPTGLHHFVYTPFVFGPAAVPDGIQVYWVQHIKEFAQSTQSLKSLFPQGGFALHGNSKIFGAPGIALAMYATAKSDKKKAVAALLIPIIFTAVISGITEPLEFTFLFIAPVLFAVHACLAATMAATMYAFGVVGNMGGGLLDFFFLNWIPMFKNHSGTVIAQIVIGLIFTAIYFVVFRFLILKMDLKTPGREDEDEEMKLYSKADYRAKHGEGDAKGGVSSAEDEYAQKGAIILEALGGKENIEELNNCATRLRVSVKDASKLLPDAAFKAAGAHGVVRKGTAIQVIIGLSVPQVRERIEEMMKKG
>CP001685.1|ACV39399.1|1611513_1612221_+|transcriptional-regulator,-GntR-family
MNKYEKVYHDIKDKIKNGKLKPGDFLKKEDDLALDYNFSKLTVRKALSMLEAEGYIQKIKGKKSIILEKKNLENISLTSIQTVQEINKLQNIHLETELISLYIVQGIKKLMEEFQVPESADFYKVVRTNSLNGEVLNYSTSFFDRKIVPFLNEEIAKKSIYEYLEKELNLKIAYSRRDISFRKITSEEQKYLKLEDINMVVVIETHAYLSNGTLFQYETIIHHPEKFTFSAIAKR
>CP001685.1|ACV39398.1|1609964_1611287_-|glycoside-hydrolase-family-4
MKKFSIVVAGGGSTFTPGIVLMLLENLDKFPIRQIKFYDNDAQRQEVIAKACDIIIKEKAPDINFVYTTDPETAFTDIDFVMAHIRVGKYAMREKDEKIPLRHGVLGQETCGPGGISYGMRSIGGVIELVDYMEKYSPNAWMLNYSNPAAIVAEATRRLRPNSKILNICDMPIGIEIRMAEMLGLKSRKDMVIRYFGLNHFGWWTDIRDKKGNDLMPALREKVAKIGYNVEIEGENTEASWNDTFTKARDVFAIDPTTMPNTYLKYYFFPDYVVEHSNPNHTRANEVMEGREKFVFGECRAIAEKGTAKDSKLHVDDHASYIVDLARAIAYDTKERMLLIVENDGAISNFDPTAMVEVPCIVGSNGPEKIVQGKIPQFQKGLMEQQVSVEKLTVEAWMEGSYQKLWQAITLSRTVPSASVAKAILDDLIEANKDFWPVLK
>CP001685.1|ACV39397.1|1607825_1609568_-|alpha-amylase-catalytic-region
MDTKKLDKKWWKKEVGYQIYPRSFYDSNNDGIGDLNGITEKLDYLKELGITLIWICPVYKSPMDDNGYDISDYYDINPEFGTKEDLERLIVDAEKRGIKIILDLVINHTSDEHEWFLEALKNPESKYRNYYIFKRGKNGLPPTNWRSHFGGSAWEKVEGETDENGNEMYYLHLFSKKQPDLNWENPEVREELYKMVNYWLEKGIAGFRVDAINSIKKDKDYLDLPVDGADGFAFSIKYTLNQPGIEEFLGELAEKTFKKYNCMTVAETPLLEYERYNDFIGEDGFFSMIFDFSYSDLDMAKEGFYYSVQDVKISELRNKIFESQLTQQKYGWGAPFLENHDLPRSLNKFLGEKANEINAKLLATLFFFLRGTPFIYQGQEIGMDNFERTDIAQFDDIASRDQYQRALGEGFSPKEALYFVNKRSRDNSRTPFQWDSSKNAGFSKDENVKAWIELTGSHKKVNAESQINNEDLIFAHYKKMIDLRQNGKYSDCLIYGEFIPVELENDEIIAYVRKYENQKVLCINNFSELKQETKLSEIAKVLEEKEIKIGEILINNFDGIENDGEKVVLEGFQSLLVEIL
>CP001685.1|ACV39396.1|1607260_1607602_-|hypothetical-protein
MKKFLLLMTFFTSMVAYARAGEVGTKTFENVTGYCENGKVTSIKEDPNTENYLAYVRVTYPLCKINGLRYRNIKFSYRTRDDGKFVAKQVKNINLGGYDIEINYDTRTIYVRH
>CP001685.1|ACV39395.1|1606794_1607061_+|addiction-module-toxin,-RelE/StbE-family
MKYSLMYSEKAQKQLNKLDNSMKSKILKYIDQNLFDTDNPKKFGKALRYNLKGFWRYRVENYRIIVKIEESELVILIVQIDKRDKIYI
>CP001685.1|ACV39394.1|1606568_1606805_+|conserved-hypothetical-protein
MITVSINANPDIENKINNYVKENNINLNQVMLDLILEKIEDEEDYKLAVEAYEEEKDNRENWISHEDLIKKLGLENEI
>CP001685.1|ACV39393.1|1605986_1606484_+|methylated-DNA/protein--cysteinemethyltransferase
MKKNIYFYETNTPIGKIGLATTENDSHITDIIWNYEIEKFKNDDNFQINETELIKRAKKQLFEYFSKKRKQFDLPLLKEGTPFQISVWNALETIPYGETRSYKDIAVAIKNEKAVRAVGMANNRNKISIFIPCHRVIGVDGKLVGYGGGLHIKQFLLELEGIKIK
>CP001685.1|ACV39403.1|1618155_1618263_-|hypothetical-protein
MEEVLVIVVMIAGGLTGFLMVKFIQKKLKAKNEKK
>CP001685.1|ACV39404.1|1618293_1618446_-|hypothetical-protein
MDTDYTILVILTYIMIIIGGVAGIGLIVAFFRKLGKIESKDKLEEEKLDD
>CP001685.1|ACV39405.1|1618473_1619097_-|phosphoribosylglycinamide-formyltransferase
MSKIIENSKDKSKNKKTRIAVFISGSGSNLQSIIDNIENGNLNCEISYVIADRECFGLERAEKHGIKSIMLDKKLFGKNLSDEINAILENDTERTDYIVLAGYLSILSESFINKWNRKIINIHPSLLPKYGGKGMYGIKVHEAVIVNKEKESGCTIHFVDNGIDTGEIITNVKVPVYENDTPEILQKRVLEKEHILLIEGIKKLLGQ
>CP001685.1|ACV39406.1|1619084_1620083_-|phosphoribosylformylglycinamidine-cyclo-ligase
MSISYKDSGVDKEEGYKSVEKIKNGAKSTYNANVMNDLGSFGALYKLGDYKKPVLVSGTDGVGTKLKVAFETGIYNTVGIDCVAMCINDILCHGAKPLFFLDYLACGKLDSNVSAEIVSGVVEGCLQSEAALIGGETAEMPGFYTPGEYDIAGFAVGAVEEDQIVNGSDVKENDVLIAIPSSGAHSNGFSLIRKLFTDFTEVYNEKTIGEHLLTPTKIYVKPVQAVMKEVKINGMAHITGGGLIENVPRTIPDGLCANIQKSKIQIHELFKHDAFSRVSEEEMWGTFNMGVGFILIVDAKDKKKVIEILGQNGETAYEIGHIEKGDEKICLK
>CP001685.1|ACV39407.1|1620217_1620505_-|YCII-related
MYIVSLNYIKEVSEVEKHLEEHIKFLEKYYEMGKFICSGRKNPRIGGVILLNAESSSEVEKIILEDPFNANEIAEYEITEFFPTKYNKNFKTFVE
>CP001685.1|ACV39408.1|1620514_1621966_-|amidophosphoribosyltransferase
MFKSLNEECGVFGVFGHHEAARLTYYGLHSLQHRGQEAAGIVVSDGKRVNGHRGPGLVSEVFNDDRIFNRLEGNSAIGHVRYATSGSSSGRNIQPFLFQFFDGSIALAHNGNLINARTLKRELEKHGAIFHSSSDTEVLVHLIRRSKEKDFLSQLKDALRQVKGGFSFLVQTQTELYGVVDPFEFRPLILGKTKNGAYILASETCALEIVGAEFIRNIRSGEIIIINKEGYRIEKYTENTSTAIAAMEYVYFSRPDSDISGVNVHSARKRCGRRLAQEAPVEHADMIIGVPNSSLSAASGYAEEIGKPYEMGLIKNQYVARTFIQPTQELREQGVRMKLSAVKSVVKDKVVVMIDDSIVRGTTSSRIVQLLKEAGAKEVHVRIASPEFKFPIFYGIDVSNSSELISANKTIEEVKEYIGADSLAFLSIDGLIESIGLDFDAPYTGLCMECFNGDYPAGLGDYEEEFYDSLTPIQKEALEELKK
>CP001685.1|ACV39409.1|1621986_1622706_-|phosphoribosylaminoimidazole-succinocarboxamides-ynthase
MEKREQIYEGKAKSIFATDNADEIIMYFKDDATAFNGVKKDQLEDKGILNNKISTLIYGYLIKNGVKTHWIETLNEREQLCKKVEIVPLEVIIRNRATGSFVKKYGAEEGKIFKNPTFELSYKNDDLGDPLLNDDHALALELVSAEELKEIKEQTFLINKLLSEIFDKMNLILVDFKIEFGRDKDGNILLADEISPDSMRLWDKDTLKKLDKDRFRQDLGDVMGAYREVLRRLEKALAE
>CP001685.1|ACV39410.1|1622759_1623239_-|phosphoribosylaminoimidazole-carboxylase,-catalytic-subunit
MKVAIFFGSQSDTEKMRGAANCLKEFGLEYEAYILSAHRVPEKLEEVLADVETRGAEVIIAGAGLAAHLPGVIASKTILPVVGVPLNGAIGGLDALYSIVQMPKSIPVATVGIDNSYNAGMLAVQILAVKYPEIKEKLINFRKEMKAKFIADNEKKIEL
>CP001685.1|ACV39411.1|1623341_1627148_-|phosphoribosylformylglycinamidine-synthase
MNYRIFVEKKEDFRVEAQNLFSDLKENIGIDGLTSVRVLNIYDIFNLGENDLEKLEKTVFSEINVDNVFKSFDEVFKEKNSENVYFSVEFLPGQYDQRADSAIQCINLLIDEDNNINVKSGKLIILYGKISPDEFARIKKYYINEVEAREKDLNVLSENVETENTDDVIVYEGFTEKTKEEIESLKNELELAMTVNDLLFIQEYFKNEEKRNPTETEIRVLDTYWSDHCRHTTFETIIDDIKVENETYKNIIEKAINEYLESREYVHADRISKKPMTLMDLATIFGKEQRKNGNLPDLEVSDEINACSIYIDVPIERIDEDGEKSTTTEKWILQFKNETHNHPTEIEPFGGASTCIGGAIRDPLSGRTYVYQAVRISGSADPTEKIEDTMAGKLPQKVITQVAAHGFSSYGNQIGLATTHVNEIYDEGYKAKRMELGLVVGAAPAENIIREKPENGDIVILLGGRTGRDGIGGATGSSKEHTTESSEKSSAEVQKGNAIVERKIQRLFRNKNVTKLIKKCNDFGAGGVSVAIGELADGLEIDLNKVRVKYIGLTGTELAISESQERMAVVIEKQNLDKFIEFANEENLEAYQVAEINDSNRLVMKYNGKAIVDISRDFLNTNGAASNINITIENTPKLNLNREVEGNDFRSKFVNNLKDLNVASQRGLVETFDSTIGATTVLMPFGGKYQLTPAEVSVQKVSVINAETDVASMVGYGYNPYVAKQSTFHGGAYAVIESMAKVVAGGGNYKNIRFTFQEYFERLGQDSKKWGKPLSALLGALYIQKSFGLPSIGGKDSMSGTFNEISVPPTLVSFAVSVTDAENVISSEFKKAGNNVYLITTPNDENDLPKLDELKANFDFITENIRNKKIVSATAVKNGGIAESLAKMTFGNKLGVDVAAQIDENDWFKVNYGAFVVETAENIDYKNAVLLGKVTSEAKITVNGTNFDLDELIGNWESKLEKIFPTKKEVEKEHKIAHCEGLKYEKLKKIEHENMISNISNTYAKPRVFIPVFPGTNSEYDLERAFNREGGLAKIGVFNNLSHNNILNSIDNFVKEIDNSQILMLPGGFSAGDEPDGSAKFMVAVLKNKKVKEAVENLLKRDGLILGICNGFQALIKSGLLPYGEIRELNETSPTLTFNTIDKHMSKIVQTKIITNNSPWLSDMKEGDIHSVAISHGEGRIVLTEEEYKKLYENNQIATKYVDLEGNSTIDSQFNPNGSYYAIEGMLAYNGRIFGKMGHSERKGKNVYKNIYGNKEQNIFRNGIKFFK
>CP001685.1|ACV39412.1|1627590_1627944_-|arsenate-reductase-and-related
MNKIYCYPRCTTCKKAVKWLEENGIDYEYKHIVEETPSKEDIKKYYKESGLPLKRFFNTSGNVYKELNLKEKLAEMSEDEQFELLASNGMVLKRPLLVGKDFVLVGFKEAEWVEKLK

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Crispr_ID: CP001685_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP001685_7

1880132-1880237

TypeVI-A

Consensus_repeat	Method
TGTTTTAGTCCTCTTCATTTTTGGGGTGGTCTAAATC	CRISPRCasFinder

1 spacers

cas13a

The CRISPR arrays of CP001685_7

>merge|CP001685|7|1880132-1880237|CRISPRCasFinder
TGTTTTAGTCCTCTTCATTTTTGGGGTGGTCTAAATCTATATCGAAAGTTAAGCTAGAATGTGTCATATTGTTTTAGTCCCCTTCATTTTTGGGGTGGTCTAAATC

>CP001685|7|7|1880132-1880237|CRISPRCasFinder
TGTTTTAGTCCTCTTCATTTTTGGGGTGGTCTAAATC	TATATCGAAAGTTAAGCTAGAATGTGTCATAT
TGTTTTAGTCCCCTTCATTTTTGGGGTGGTCTAAATC

Protein	Signature genes	Signature genes Name	Protein_function
CP001685.1\|ACV39674.1\|1889465_1890095_+\|conserved-hypothetical-protein	unknown	unknown	gnl\|CDD\|377026
CP001685.1\|ACV39658.1\|1870171_1870540_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378198
CP001685.1\|ACV39667.1\|1884687_1884870_-\|YcfA-family-protein	unknown	unknown	gnl\|CDD\|377942
CP001685.1\|ACV39668.1\|1885102_1885312_-\|preprotein-translocase,-SecG-subunit	unknown	unknown	gnl\|CDD\|377143
CP001685.1\|ACV39656.1\|1868464_1869613_-\|lactaldehyde-reductase	unknown	unknown	gnl\|CDD\|182595
CP001685.1\|ACV39670.1\|1886336_1886696_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378240
CP001685.1\|ACV39664.1\|1876820_1879694_-\|hypothetical-protein	unknown	unknown	unknown
CP001685.1\|ACV39657.1\|1869728_1870130_-\|ATP-synthase-I	unknown	unknown	unknown
CP001685.1\|ACV39655.1\|1867478_1868207_+\|methyltransferase-small	unknown	unknown	gnl\|CDD\|226608
CP001685.1\|ACV39661.1\|1872201_1872558_-\|hypothetical-protein	unknown	unknown	unknown
CP001685.1\|ACV39671.1\|1887369_1887636_-\|ribosomal-protein-S20	unknown	unknown	gnl\|CDD\|178943
CP001685.1\|ACV39662.1\|1872591_1873512_-\|Inorganic-diphosphatase	unknown	unknown	gnl\|CDD\|235458
CP001685.1\|ACV39665.1\|1880458_1883938_-\|hypothetical-protein	cas13a	cas13a_c2c2_CAS-VI-A	unknown
CP001685.1\|ACV39663.1\|1873684_1876834_-\|UvrD/REP-helicase	unknown	unknown	gnl\|CDD\|224000
CP001685.1\|ACV39660.1\|1871475_1872162_-\|peptidyl-prolyl-cis-trans-isomerase-cyclophilin-type	unknown	unknown	gnl\|CDD\|238194
CP001685.1\|ACV39659.1\|1870557_1871262_-\|Methyltransferase-type-11	unknown	unknown	gnl\|CDD\|379312
CP001685.1\|ACV39673.1\|1888911_1889451_+\|iron-sulfur-flavoprotein	unknown	unknown	gnl\|CDD\|223728
CP001685.1\|ACV39672.1\|1888202_1888805_+\|transcriptional-regulator,-TetR-family	unknown	unknown	gnl\|CDD\|224228
CP001685.1\|ACV39666.1\|1883967_1884384_-\|protein-of-unknown-function-UPF0150	unknown	unknown	gnl\|CDD\|374224
CP001685.1\|ACV39669.1\|1885373_1886141_-\|triosephosphate-isomerase	unknown	unknown	gnl\|CDD\|234589

Protein	Function_ID	Function_description	E-value
CP001685.1\|ACV39674.1\|1889465_1890095_+\|conserved-hypothetical-protein	gnl\|CDD\|377026	pfam03358, FMN_red, NADPH-dependent FMN reductase.	0.000127835
CP001685.1\|ACV39658.1\|1870171_1870540_-\|hypothetical-protein	gnl\|CDD\|378198	pfam09527, ATPase_gene1, Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophobic stretches and is presumed to be a subunit of the enzyme. It carries two transmembrane helices and is a magnesium or calcium uniporter. The atp operon of alkaliphilic Bacillus pseudofirmus OF4, as in most prokaryotes, contains the eight structural genes for the F-ATPase (ATP synthase), which are preceded by an atpI gene that encodes a membrane protein with 2 TMSs. A tenth gene, atpZ, has been found in this operon, which is upstream of and overlapping with atpI.	3.78249e-08
CP001685.1\|ACV39667.1\|1884687_1884870_-\|YcfA-family-protein	gnl\|CDD\|377942	pfam07927, HicA_toxin, HicA toxin of bacterial toxin-antitoxin,. HicA_toxin is a bacterial family of toxins that act as mRNA interferases. The antitoxin that neutralizes this is family HicB, pfam15919.	2.52104e-13
CP001685.1\|ACV39668.1\|1885102_1885312_-\|preprotein-translocase,-SecG-subunit	gnl\|CDD\|377143	pfam03840, SecG, Preprotein translocase SecG subunit.	0.00365658
CP001685.1\|ACV39656.1\|1868464_1869613_-\|lactaldehyde-reductase	gnl\|CDD\|182595	PRK10624, PRK10624, L-1,2-propanediol oxidoreductase; Provisional.	0
CP001685.1\|ACV39670.1\|1886336_1886696_+\|hypothetical-protein	gnl\|CDD\|378240	pfam09685, DUF4870, Domain of unknown function (DUF4870).	0.00345816
CP001685.1\|ACV39655.1\|1867478_1868207_+\|methyltransferase-small	gnl\|CDD\|226608	COG4123, COG4123, Predicted O-methyltransferase [General function prediction only].	1.82071e-75
CP001685.1\|ACV39671.1\|1887369_1887636_-\|ribosomal-protein-S20	gnl\|CDD\|178943	PRK00239, rpsT, 30S ribosomal protein S20; Reviewed.	9.43542e-23
CP001685.1\|ACV39662.1\|1872591_1873512_-\|Inorganic-diphosphatase	gnl\|CDD\|235458	PRK05427, PRK05427, putative manganese-dependent inorganic pyrophosphatase; Provisional.	4.45885e-161
CP001685.1\|ACV39669.1\|1885373_1886141_-\|triosephosphate-isomerase	gnl\|CDD\|234589	PRK00042, tpiA, triosephosphate isomerase; Provisional.	2.78144e-143
CP001685.1\|ACV39663.1\|1873684_1876834_-\|UvrD/REP-helicase	gnl\|CDD\|224000	COG1074, RecB, ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) [DNA replication, recombination, and repair].	1.02421e-65
CP001685.1\|ACV39660.1\|1871475_1872162_-\|peptidyl-prolyl-cis-trans-isomerase-cyclophilin-type	gnl\|CDD\|238194	cd00317, cyclophilin, cyclophilin: cyclophilin-type peptidylprolyl cis- trans isomerases. This family contains eukaryotic, bacterial and archeal proteins which exhibit a peptidylprolyl cis- trans isomerases activity (PPIase, Rotamase) and in addition bind the immunosuppressive drug cyclosporin (CsA). Immunosuppression in vertebrates is believed to be the result of the cyclophilin A-cyclosporin protein drug complex binding to and inhibiting the protein-phosphatase calcineurin. PPIase is an enzyme which accelerates protein folding by catalyzing the cis-trans isomerization of the peptide bonds preceding proline residues. Cyclophilins are a diverse family in terms of function and have been implicated in protein folding processes which depend on catalytic /chaperone-like activities. This group contains human cyclophilin 40, a co-chaperone of the hsp90 chaperone system; human cyclophilin A, a chaperone in the HIV-1 infectious process and; human cyclophilin H, a component of the U4/U6 snRNP, whose isomerization or chaperoning activities may play a role in RNA splicing. .	3.33632e-46
CP001685.1\|ACV39659.1\|1870557_1871262_-\|Methyltransferase-type-11	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	9.2938e-18
CP001685.1\|ACV39673.1\|1888911_1889451_+\|iron-sulfur-flavoprotein	gnl\|CDD\|223728	COG0655, WrbA, Multimeric flavodoxin WrbA [General function prediction only].	3.94273e-10
CP001685.1\|ACV39672.1\|1888202_1888805_+\|transcriptional-regulator,-TetR-family	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	1.33832e-10
CP001685.1\|ACV39666.1\|1883967_1884384_-\|protein-of-unknown-function-UPF0150	gnl\|CDD\|374224	pfam15919, HicB_lk_antitox, HicB_like antitoxin of bacterial toxin-antitoxin system. This is a family of HicB-like antitoxins.	2.24275e-06

>CP001685.1|ACV39664.1|1876820_1879694_-|hypothetical-protein
MKINYRGIGSDLKNILFEEFRKNENTLFVFENSASFFEIKREFLQNEEIQQDLGIFQNFRLINSYDFYENVFVTNKIVVKEEKQVVLFYNSLDEKLKKRLEVSSYYDIIDIAYNYYNLFAELQEHKIDLENIELENWQKNLFETLKMVDEKVKETCQMKGLILPYMLRNVENISDNFLRKYKKICFVNKVRFSPLEKEIVKNFEEKGIIVENILQLSENDFDTKELKINESFSLPAKEIFDAKDINIEIHEFSSKFGELLGLVRKLEEVEKESKKAGKKNGALGENYRIFEAQENAEEAKSDYQLLRQQKISSNLEITMKDTKIYKILNLIYNLLDNMKEINRKSGEKLFLFRVKDLYDTYKSNDLLNIFDLKDSYYIFQNLASKDYKYISREELERINQDELKKLEKENQKEKFKDIYKKRMTAISKIIKFVEELEKVYEYTTLKEYGDYLEKIYLNNEEKVKEDKNVKDKYFEALSEMVVLEDFSFDNLWDKFFNENISANLLKLFLKYLDKKSIGLNLEETAEEDLENRFSINSFQNISENTKENIIILNLQDSFPKIRMNNFLFSKVQRAKMGLPTSDDKKLIEMFKIYQNILSAKNVYLAYVKDLEKNIDSASVIEELKLKYGIKVIEGEISEAEELYFVKKYFLKDRKEKWDKKEIGEFIQSKLEKDLEKINAEKLSLGYYSFEKMRDFEYGYYLEKLIGEQEVEKVEDELNVKIFGTIIHAFYENVVMKNKADLENKTFEIDRNQLAEILENVINSFEYKVPKEYLEFYKKVSFEEILNSAEKYFEKLIKKLETEKDIQIYFEERIKLSSEKELFENVSINGVTDLHIKTSDKNYLFDYKSGKLRDGKKGYKTDKVYKAMEQLDYYSLMLENDNNENIEKIIVDTWEGALVSDERTEDKKLTKENIEEVISRYRNNEVYDLGNFKDSKNYFYKEYANICRREDELSDEDE
>CP001685.1|ACV39663.1|1873684_1876834_-|UvrD/REP-helicase
MKTNNIILKASAGTGKTYRLSLEFIANLIRGVNYKNIVVMTFTKKATAEIKERIYDFLHQIAFDEGNGTELEKNLKEIYKFDNLNKKELQNIYFEMIKNKEDIRISTIDGFTNQIFKNAIAPYFNIYNYEILDKETDEFYSKVLIKIIENKEIFEKFKFIFDEKKEKKNIGVYIKIIEEILEMHSKFVLAKDFEMPKDKKVSYKFIDELDGIFEKIEEIADKKGKDIEEVLTAPFHSLYKKYSILVKDESKNENQKIKEKLELIVPEINLFFEKKIWDGRKTTGAKNQDDREALEESSEDLKEKLSEYIFVSKVLPLDKKLKNIAQIIFNIAQKIKISSKKFTYNDILVYTYEFIFNKELKFVENDKVTEEFLELIGGKIDTIMIDEFQDTSILQWKILKLMLNTSENIICVGDEKQSIYNWRGGEKELFEKLETMIEGNVQTLDKSYRSYKQIIENVNKIFNGYDSNWNYTDSGYREDEEYQRGYFGYFIQDTKEKKEKIYTKIVDMIKNGQIKNLGKSAVICRKNAHLKEIAAVLNEAKIPYTLESKATILEYKPIVSMYQLIKFFAFDNFKYLLEFVRSDLIGGLNSHVKYLLENKNEIMKYIGENSKIKGFEEFINIQKDDEIKGKLLGYKKINTLERNGLIFEGIIEKIKELRALSINLNDKYQKENFSRKLVESFEITKFYSTNSDLKNIFIFFNILKKYNNLYEFVTFIEEEKENVKQVSSKDVNAINLMTIHASKGLEFDTVFYYKRKTNKGNPDKDNFKSYLDFDEKFNDMKKFVILFTDYNKRMIRNELSEMRDKNSQKEMMEEINNDYVALTRAKKNLILLFDAEITKDKQYADSLVKRVIDVYKDENEYKKGKIVESKIPEETTDTSDVKVSDNLFKTYFDDDKFVVKKSSNTLENEFKRKKGLAMHYYFEHILNDLENDRIVAKSALYSRYGNMLGKKIVEDLIERLDKFISKNLEMYSSKYKVYTEFEILNADGEKRIIDRINIDEKNKKIYIYDYKTGFEPETNEKYQEQINEYRGILENKICGYEIVAKLLEV
>CP001685.1|ACV39662.1|1872591_1873512_-|Inorganic-diphosphatase
MSILVFGHKNPDTDTICSAIAYAELKNKLGKDVKAVRLGEINEETKYALNYFKAEKPELVENVAGKEIILVDHNERTQTAEGFEEAKILELIDHHRISNFNVDEPLYARVEPVGCTATIILKLFKENNLVPSKETAGLMLSAIISDTLLFKSPTCTECDIKAGKELAEIAGINADEYGLEMLKAGTALGDKSEAELLNMDMKIFEIDGIKIGVAQVNTVNEAEVLERKEKLLAEIDNIIVKDGLKFFMLAITNILTNDSTALVSGDGNDVIEKAFGEKVDSNLATLKGVVSRKKQIIPPLTKAIQG
>CP001685.1|ACV39661.1|1872201_1872558_-|hypothetical-protein
MAIVKLKRREELKILFAIKLPEVISELYKAVRSKRIADEIVRNSLKIKKNRVINTLELVDGFGNQFSVLVIYDNILEEKELLKYNMEIEEINFRILEFDFNGKMEIEEMIGHIKTIYN
>CP001685.1|ACV39660.1|1871475_1872162_-|peptidyl-prolyl-cis-trans-isomerase-cyclophilin-type
MKKIVILFSILMLLIVNVANAKRNKTKKTRNTEENKKVEKVEIGSKKFNKIMEEFRLEATIKTTKGDISFYLYPEAAPKNVANFVFLAKKNFYNNLPFHRVIPNGLVQGGDHKGDGTGTTGYYVNDEFVKWLNFNYAGILALANSGPNTNSSQFFITMQAISSLDGKHTIIGGTKTREDLGIVRLLRQGDKILDIEIKGKNVNRFLDYFPNEVAEWESKLEKPSLSNE
>CP001685.1|ACV39659.1|1870557_1871262_-|Methyltransferase-type-11
MMDGINFYEHLLKKKGTVLDLGCGTGEFIWRFLKDGFSVIGVDLSEKMLEISEKKLKEKNLKNNNYSLINENIINYENKKNKKNNKSEINQVDYIICNFDTVNYLKNEKEFLKFIEKCNRNLKKGGYLIFDAVTEDIFEEIFENDIFLDEELEYTSIWRHEKLGKRKHLVEIDLFIRENKNDNLFRKYNEVQNKFIYEPEWIVETVQNKGFEIFDTASNPEFGESRIFFVLKKL
>CP001685.1|ACV39658.1|1870171_1870540_-|hypothetical-protein
MNFENEKNNLENNNNKDLTNDKIIDEEEKRKQRLFEIEKKLGRHNDEKEIKNKRNSKVMKYFALATNMVYILALPILIMLGFYMLLKRYLFKTDQPLVLIVFLIIGAVSGYWSLIKQVNNIK
>CP001685.1|ACV39657.1|1869728_1870130_-|ATP-synthase-I
MLERMPGNIKKAYIISIFIMAIFFIMGIIFNCVELYFGYLIGAIISIININLLVNGVHKILYFQNNPKFRGNFEYLKRMAIFCLGMFIVGKVSQKYFESHVLTNIAATGAGALNFKISYLLCHLKEKFLLSKK
>CP001685.1|ACV39656.1|1868464_1869613_-|lactaldehyde-reductase
MAQRIILNEVSYHGFGAINHITEEVKKNKFKKAFICTDKGLLEFGGVSKITDLLDKENLAYEVFSDIQPNPTIENVKDGVEKYKSSGADYIIAIGGGSPMDTAKAVAIIINNPEFSDVRSLEGVADTKNKCVPIIAVATTAGTAAEVTINYVITDVEKDRKFVCVDPHDLPIIAIVDPGMMTSMPKELTAATGLDALTHAIEGFTTKAAWEMTDMFHLKAIELIAKYLRSAVNNEPEGREKMALASYLAGMGFSNVGLGIVHSMAHPLGAFYGTSHGIANAIILPTVMEYNAEFTGEKFKAIAKAFGVKHTRKMSPEEYRKAAIDKVKELASDVGIPNNLKGIMDIKDLDFIAESALNDVCTGGNPRDTNLEDIKELYKKLL
>CP001685.1|ACV39655.1|1867478_1868207_+|methyltransferase-small
MKKNGEETVTPIKNMKIIQRNDFQNFTLDSVLLADFVKINRKTKKILDIGTGCGIIALLLAQRSKAQITGIELQETMAEITIRNINGNKFENQVKIINEDIKNYKNIFNRDEFDTIVTNPPYFEFTGDISQTNNLEQLANARHNINLTLEEIIKISSYLLKNMGSFSIVFRSERLVEVLSLLQKYNLEPKRMKNCYTKWNENSKICLLEAIKNAKKGFSIEMPIFVYDENGERSEYVENLYK
>CP001685.1|ACV39665.1|1880458_1883938_-|hypothetical-protein
MKVTKVGGISHKKYTSEGRLVKSESEENRTDERLSALLNMRLDMYIKNPSSTETKENQKRIGKLKKFFSNKMVYLKDNTLSLKNGKKENIDREYSETDILESDVRDKKNFAVLKKIYLNENVNSEELEVFRNDIKKKLNKINSLKYSFEKNKANYQKINENNIEKVEGKSKRNIIYDYYRESAKRDAYVSNVKEAFDKLYKEEDIAKLVLEIENLTKLEKYKIREFYHEIIGRKNDKENFAKIIYEEIQNVNNMKELIEKVPDMSELKKSQVFYKYYLDKEELNDKNIKYAFCHFVEIEMSQLLKNYVYKRLSNISNDKIKRIFEYQNLKKLIENKLLNKLDTYVRNCGKYNYYLQDGEIATSDFIARNRQNEAFLRNIIGVSSVAYFSLRNILETENENDITGRMRGKTVKNNKGEEKYVSGEVDKIYNENKKNEVKENLKMFYSYDFNMDNKNEIEDFFANIDEAISSIRHGIVHFNLELEGKDIFAFKNIAPSEISKKMFQNEINEKKLKLKIFRQLNSANVFRYLEKYKILNYLKRTRFEFVNKNIPFVPSFTKLYSRIDDLKNSLGIYWKTPKTNDDNKTKEIIDAQIYLLKNIYYGEFLNYFMSNNGNFFEISKEIIELNKNDKRNLKTGFYKLQKFEDIQEKIPKEYLANIQSLYMINAGNQDEEEKDTYIDFIQKIFLKGFMTYLANNGRLSLIYIGSDEETNTSLAEKKQEFDKFLKKYEQNNNIKIPYEINEFLREIKLGNILKYTERLNMFYLILKLLNHKELTNLKGSLEKYQSANKEEAFSDQLELINLLNLDNNRVTEDFELEADEIGKFLDFNGNKVKDNKELKKFDTNKIYFDGENIIKHRAFYNIKKYGMLNLLEKIADKAGYKISIEELKKYSNKKNEIEKNHKMQENLHRKYARPRKDEKFTDEDYESYKQAIENIEEYTHLKNKVEFNELNLLQGLLLRILHRLVGYTSIWERDLRFRLKGEFPENQYIEEIFNFENKKNVKYKGGQIVEKYIKFYKELHQNDEVKINKYSSANIKVLKQEKKDLYIRNYIAHFNYIPHAEISLLEVLENLRKLLSYDRKLKNAVMKSVVDILKEYGFVATFKIGADKKIGIQTLESEKIVHLKNLKKKKLMTDRNSEELCKLVKIMFEYKMEEKKSEN
>CP001685.1|ACV39666.1|1883967_1884384_-|protein-of-unknown-function-UPF0150
MDVFYPVVVTKEDGTYYGCIVDFDKFEDGEINYYATFGDSMEEAVSNLRETLGLHLADFLDVRKKFPEPSKVEDVKLKENQYLYILSVDPVYEVAKVTNALKKKTLTIPVWLDILAQEKNLNFSQILQKALKKELGIE
>CP001685.1|ACV39667.1|1884687_1884870_-|YcfA-family-protein
MSYRKIEKRFRKLGGKVVRIKGSHYQWMIPGVEGVVTVPYSKDIPVGTVKSIEKQVGIKF
>CP001685.1|ACV39668.1|1885102_1885312_-|preprotein-translocase,-SecG-subunit
MLENLLIIALVILSIIMISVILLQPDRSQGLAKSSANILDEEKEGIEKFTEIVATLFLVVAILFQIVRS
>CP001685.1|ACV39669.1|1885373_1886141_-|triosephosphate-isomerase
MRKVIVAGNWKMNKTAKEAAQFFNELKPLVADVKNAGIVIGAPFTALETATRETAGSNIKIAAENMNAKESGAYTGEVSPLMLKDLGVEYVILGHSERREYYHETDEIINEKVKSALAHDLKPILCIGEKLEEREAGTTNDVVKTQIVGGLKDVTAAEMANVVLAYEPVWAIGTGKTATPEQAQEVHAFIRGLLTDLYGKEVAENVTVQYGGSMNDANAADLIAQTDIDGGLVGGASLIPEKFAVIIKAGDAAAK
>CP001685.1|ACV39670.1|1886336_1886696_+|hypothetical-protein
MGNNISEQKSIAGLRANAAAFIVNLSFFMGLGLLIPIFALILEDKNNFVRAYSKQTLAITILTLVSFLLNFIIFIGNLAFFIIFILLIIFQIVAAGASILEKEFKIPYIEKIVNLLFVD
>CP001685.1|ACV39671.1|1887369_1887636_-|ribosomal-protein-S20
MAHSKSSKKRVFIGERNAARNQAIRSRTKTFVKKVLAAVEAKNVDEAKSALSAAYKELDKAVTKGVLKKNTASRKKSRLTLKVNALAN
>CP001685.1|ACV39672.1|1888202_1888805_+|transcriptional-regulator,-TetR-family
MEKSKKSYHHGNLREELIEKGIELINEVGEEKLSLRKVAKMCGVSNAAPYTYFKKKSDLLYAMSDYIWGILAAELDKTRKRYENQEDLLVKLGKTYVMFFCGNHRYYHFIISRKNMKIDLFSKFSKVENNNEKAFSILKFEATKILKKMGVSNQAIQDKIVAMWALVQGLTTIMITNDIKYSESWEEKIEEIIKSVCIAK
>CP001685.1|ACV39673.1|1888911_1889451_+|iron-sulfur-flavoprotein
MELIIHDLDNEKLENLKWEIEKKEKIMDKIKESIDQKKIIDDEDISIICDNNKIKSCMGCFECWIKTPGKCKIRDGYENLAKLYSKADKVVIISQCVYGSYSPFVKNVLDRTIPYLLPFFKFKNKEMHHITRNKTKFDLNVYFYGKNLSPNEKTVAKEIVKANSVNLDVKNFKVSFLEN
>CP001685.1|ACV39674.1|1889465_1890095_+|conserved-hypothetical-protein
MKISIINGSPKVGKSNSEILGNYILPLLKDNEIKKYYSISVRLNDKIKNEIHSSDILIFLFPLYVDGIPSNLLKLLVEFEKEKVIKSETKIYCIANNGFYEGKQNRLAILQMKNWCEKVKADWGQGIGLGAGELLPYLKKYKLGQGPLKNLGKVLDKFSTNILTLKSDKDIYINPNWLKSLYFFQGSISWILKGRKNNLRIRELFRRSN

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
CP001685_2	2.1\|879330\|35\|CP001685\|PILER-CR,CRISPRCasFinder,CRT,CRT	879330-879364	35	CP001685.1	468230-468264	0	1.0

1. spacer 2.1|879330|35|CP001685|PILER-CR,CRISPRCasFinder,CRT,CRT matches to position: 468230-468264, mismatch: 0, identity: 1.0

tattagaaaccttgtttttaataacaggatttttt	CRISPR spacer
tattagaaaccttgtttttaataacaggatttttt	Protospacer
***********************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP001685_2	2.71\|883866\|37\|CP001685\|PILER-CR,CRISPRCasFinder,CRT	883866-883902	37	NZ_AP019843	Leptotrichia wadei strain JMUB3936 plasmid pJMUB3934p2, complete sequence	14402-14438	0	1.0
CP001685_2	2.68\|883669\|37\|CP001685\|PILER-CR,CRISPRCasFinder,CRT	883669-883705	37	NZ_AP019825	Leptotrichia hofstadii strain JCM16775 plasmid pJCM16775-2, complete sequence	13138-13174	1	0.973
CP001685_2	2.76\|884191\|36\|CP001685\|PILER-CR,CRISPRCasFinder,CRT	884191-884226	36	NZ_AP019843	Leptotrichia wadei strain JMUB3936 plasmid pJMUB3934p2, complete sequence	15905-15940	1	0.972
CP001685_6	6.7\|1617326\|39\|CP001685\|PILER-CR,CRISPRCasFinder,CRT	1617326-1617364	39	NZ_AP019847	Leptotrichia hongkongensis strain JMUB5056 plasmid pJMUB5056, complete sequence	14868-14906	1	0.974
CP001685_6	6.7\|1617326\|39\|CP001685\|PILER-CR,CRISPRCasFinder,CRT	1617326-1617364	39	NZ_AP019824	Leptotrichia hofstadii strain JCM16775 plasmid pJCM16775-1, complete sequence	29894-29932	1	0.974
CP001685_6	6.7\|1617326\|39\|CP001685\|PILER-CR,CRISPRCasFinder,CRT	1617326-1617364	39	NZ_AP019836	Leptotrichia wadei strain JMUB3934 plasmid pJMUB3934p1, complete sequence	9425-9463	1	0.974
CP001685_2	2.45\|882182\|35\|CP001685\|PILER-CR,CRISPRCasFinder,CRT	882182-882216	35	NZ_AP019825	Leptotrichia hofstadii strain JCM16775 plasmid pJCM16775-2, complete sequence	4554-4588	2	0.943
CP001685_6	6.7\|1617326\|39\|CP001685\|PILER-CR,CRISPRCasFinder,CRT	1617326-1617364	39	NZ_AP019824	Leptotrichia hofstadii strain JCM16775 plasmid pJCM16775-1, complete sequence	21111-21149	2	0.949
CP001685_6	6.7\|1617326\|39\|CP001685\|PILER-CR,CRISPRCasFinder,CRT	1617326-1617364	39	NZ_AP019837	Leptotrichia wadei strain JMUB3934 plasmid pJMUB3934p2, complete sequence	1794-1832	2	0.949
CP001685_6	6.7\|1617326\|39\|CP001685\|PILER-CR,CRISPRCasFinder,CRT	1617326-1617364	39	NZ_AP019832	Leptotrichia trevisanii strain JMUB3870 plasmid pJMUB3870-1, complete sequence	3845-3883	2	0.949
CP001685_2	2.80\|884449\|35\|CP001685\|PILER-CR,CRISPRCasFinder,CRT	884449-884483	35	NZ_AP019825	Leptotrichia hofstadii strain JCM16775 plasmid pJCM16775-2, complete sequence	15782-15816	4	0.886
CP001685_2	2.84\|879846\|23\|CP001685\|CRT	879846-879868	23	MK448384	Streptococcus satellite phage Javan250, complete genome	13170-13192	4	0.826
CP001685_2	2.24\|880823\|34\|CP001685\|PILER-CR,CRISPRCasFinder,CRT	880823-880856	34	NZ_CP018879	Bacillus megaterium strain JX285 plasmid 6, complete sequence	21603-21636	5	0.853
CP001685_2	2.24\|880823\|34\|CP001685\|PILER-CR,CRISPRCasFinder,CRT	880823-880856	34	MF360958	Salicola phage SCTP-2, complete genome	251987-252020	6	0.824
CP001685_2	2.40\|881857\|36\|CP001685\|PILER-CR,CRISPRCasFinder,CRT	881857-881892	36	MN694526	Marine virus AFVG_250M936, complete genome	26118-26153	7	0.806
CP001685_2	2.66\|883540\|35\|CP001685\|PILER-CR,CRISPRCasFinder,CRT	883540-883574	35	NZ_CP038620	Arsenophonus nasoniae strain FIN plasmid pArsFIN8, complete sequence	56423-56457	7	0.8
CP001685_2	2.66\|883540\|35\|CP001685\|PILER-CR,CRISPRCasFinder,CRT	883540-883574	35	NZ_LR214986	Mycoplasma cynos strain NCTC10142 plasmid 13	434688-434722	7	0.8
CP001685_4	4.1\|1403035\|37\|CP001685\|CRISPRCasFinder,CRT	1403035-1403071	37	NZ_CP045959	Salmonella enterica subsp. enterica serovar Birkenhead strain AUSMDU00010532 plasmid pAUSMDU00010532_01, complete sequence	151288-151324	7	0.811
CP001685_4	4.1\|1403035\|37\|CP001685\|CRISPRCasFinder,CRT	1403035-1403071	37	NZ_AP017611	Escherichia coli strain 20Ec-P-124 plasmid pMRY16-002_1, complete sequence	58140-58176	8	0.784
CP001685_4	4.1\|1403035\|37\|CP001685\|CRISPRCasFinder,CRT	1403035-1403071	37	NC_025179	Escherichia coli plasmid pC59-153, complete sequence	89354-89390	8	0.784
CP001685_4	4.1\|1403035\|37\|CP001685\|CRISPRCasFinder,CRT	1403035-1403071	37	NZ_CP047577	Escherichia coli strain 94EC plasmid p94EC-1, complete sequence	29420-29456	8	0.784
CP001685_4	4.1\|1403035\|37\|CP001685\|CRISPRCasFinder,CRT	1403035-1403071	37	NC_020271	Escherichia coli O25b:H4-ST131 str. EC958 strain ST131 plasmid pJIE186-2, complete sequence	41419-41455	8	0.784
CP001685_4	4.1\|1403035\|37\|CP001685\|CRISPRCasFinder,CRT	1403035-1403071	37	NZ_CP031107	Escherichia coli strain AMSCJX02 plasmid pAMSC2, complete sequence	73877-73913	8	0.784
CP001685_4	4.1\|1403035\|37\|CP001685\|CRISPRCasFinder,CRT	1403035-1403071	37	NZ_CP010127	Escherichia coli strain C8 plasmid B, complete genome	26096-26132	8	0.784
CP001685_4	4.1\|1403035\|37\|CP001685\|CRISPRCasFinder,CRT	1403035-1403071	37	NZ_CP019055	Escherichia coli strain CRE1540 plasmid p1540-4, complete sequence	127418-127454	8	0.784
CP001685_4	4.1\|1403035\|37\|CP001685\|CRISPRCasFinder,CRT	1403035-1403071	37	NZ_MG825378	Escherichia coli strain 1108 plasmid p1108-IncFIB, complete sequence	63824-63860	8	0.784
CP001685_2	2.6\|879652\|35\|CP001685\|PILER-CR,CRISPRCasFinder,CRT,CRT	879652-879686	35	MN855879	Siphoviridae sp. isolate 341, complete genome	6336-6370	9	0.743
CP001685_2	2.40\|881857\|36\|CP001685\|PILER-CR,CRISPRCasFinder,CRT	881857-881892	36	NC_011250	Borrelia duttonii Ly plasmid pl40, complete sequence	18051-18086	9	0.75
CP001685_2	2.52\|882633\|36\|CP001685\|PILER-CR,CRISPRCasFinder,CRT	882633-882668	36	KU878088	Bacillus phage AR9, complete genome	1356-1391	9	0.75
CP001685_2	2.52\|882633\|36\|CP001685\|PILER-CR,CRISPRCasFinder,CRT	882633-882668	36	MF360957	Bacillus virus PBS1, complete genome	161916-161951	9	0.75
CP001685_2	2.66\|883540\|35\|CP001685\|PILER-CR,CRISPRCasFinder,CRT	883540-883574	35	NZ_AP018257	Calothrix sp. NIES-4071 plasmid plasmid2 DNA, complete genome	306521-306555	9	0.743
CP001685_2	2.67\|883604\|36\|CP001685\|PILER-CR,CRISPRCasFinder,CRT	883604-883639	36	NZ_KU302800	Enterobacter cloacae strain SZECL1 plasmid pKPC3_SZ clone ST231, complete sequence	39084-39119	9	0.75
CP001685_2	2.67\|883604\|36\|CP001685\|PILER-CR,CRISPRCasFinder,CRT	883604-883639	36	NC_015068	Yersinia pestis Java 9 plasmid pJARS36, complete sequence	31321-31356	9	0.75
CP001685_2	2.67\|883604\|36\|CP001685\|PILER-CR,CRISPRCasFinder,CRT	883604-883639	36	NZ_CP042976	Klebsiella pneumoniae strain KPN55602 plasmid pK55602_2, complete sequence	40360-40395	9	0.75
CP001685_2	2.67\|883604\|36\|CP001685\|PILER-CR,CRISPRCasFinder,CRT	883604-883639	36	NZ_MF156712	Morganella morganii strain GN28 plasmid pGN28-KPC, complete sequence	41874-41909	9	0.75
CP001685_2	2.67\|883604\|36\|CP001685\|PILER-CR,CRISPRCasFinder,CRT	883604-883639	36	NZ_MF156709	Klebsiella aerogenes strain E20 plasmid pE20-KPC, complete sequence	41330-41365	9	0.75
CP001685_2	2.67\|883604\|36\|CP001685\|PILER-CR,CRISPRCasFinder,CRT	883604-883639	36	NZ_MF156710	Proteus mirabilis strain GN2 plasmid pGN2-KPC, complete sequence	42071-42106	9	0.75
CP001685_2	2.67\|883604\|36\|CP001685\|PILER-CR,CRISPRCasFinder,CRT	883604-883639	36	NZ_MF156711	Serratia marcescens strain GN26 plasmid pGN26-KPC, complete sequence	42043-42078	9	0.75
CP001685_2	2.81\|884513\|35\|CP001685\|PILER-CR,CRISPRCasFinder,CRT	884513-884547	35	LC377538	Staphylococcus aureus plasmid pNTUH_3874 NTUH_3874 DNA, complete sequence	18768-18802	9	0.743
CP001685_2	2.81\|884513\|35\|CP001685\|PILER-CR,CRISPRCasFinder,CRT	884513-884547	35	NZ_CP047806	Staphylococcus aureus strain UP_1654 plasmid unnamed, complete sequence	20458-20492	9	0.743
CP001685_4	4.1\|1403035\|37\|CP001685\|CRISPRCasFinder,CRT	1403035-1403071	37	NZ_CP034950	Enterococcus faecium strain NM213 plasmid unnamed1, complete sequence	35114-35150	9	0.757
CP001685_2	2.30\|881209\|36\|CP001685\|PILER-CR,CRISPRCasFinder,CRT	881209-881244	36	LR215721	Staphylococcus phage Stab22 genome assembly, chromosome: I	10853-10888	10	0.722
CP001685_2	2.30\|881209\|36\|CP001685\|PILER-CR,CRISPRCasFinder,CRT	881209-881244	36	LR215721	Staphylococcus phage Stab22 genome assembly, chromosome: I	153127-153162	10	0.722
CP001685_2	2.50\|882505\|35\|CP001685\|PILER-CR,CRISPRCasFinder,CRT	882505-882539	35	NZ_CP020744	Bacillus mycoides strain Gnyt1 plasmid unnamed1, complete sequence	357245-357279	10	0.714
CP001685_2	2.57\|882955\|36\|CP001685\|PILER-CR,CRISPRCasFinder,CRT	882955-882990	36	NC_018878	Bacillus thuringiensis Bt407 plasmid BTB_502p, complete sequence	174631-174666	10	0.722
CP001685_2	2.61\|883215\|36\|CP001685\|PILER-CR,CRISPRCasFinder,CRT	883215-883250	36	NC_015426	Clostridium botulinum BKT015925 plasmid p2BKT015925, complete sequence	13354-13389	10	0.722
CP001685_2	2.61\|883215\|36\|CP001685\|PILER-CR,CRISPRCasFinder,CRT	883215-883250	36	KT895374	Bacillus phage vB_BpuM-BpSp, complete genome	23353-23388	10	0.722
CP001685_2	2.66\|883540\|35\|CP001685\|PILER-CR,CRISPRCasFinder,CRT	883540-883574	35	NC_047721	Staphylococcus phage SA5, complete genome	67141-67175	10	0.714
CP001685_2	2.66\|883540\|35\|CP001685\|PILER-CR,CRISPRCasFinder,CRT	883540-883574	35	MK331930	Staphylococcus phage CH1, complete genome	102833-102867	10	0.714
CP001685_2	2.16\|880303\|36\|CP001685\|PILER-CR,CRISPRCasFinder,CRT	880303-880338	36	HG796786	Uncultured bacterium plasmid pRGF00028	1432-1467	11	0.694
CP001685_2	2.24\|880823\|34\|CP001685\|PILER-CR,CRISPRCasFinder,CRT	880823-880856	34	NC_023688	Aeromonas phage PX29, complete genome	91995-92028	11	0.676
CP001685_2	2.24\|880823\|34\|CP001685\|PILER-CR,CRISPRCasFinder,CRT	880823-880856	34	MH791407	UNVERIFIED: Aeromonas phage AsFcp_4, partial genome	216780-216813	11	0.676
CP001685_2	2.24\|880823\|34\|CP001685\|PILER-CR,CRISPRCasFinder,CRT	880823-880856	34	MH791401	UNVERIFIED: Aeromonas phage AsFcp_2, complete genome	41040-41073	11	0.676
CP001685_2	2.24\|880823\|34\|CP001685\|PILER-CR,CRISPRCasFinder,CRT	880823-880856	34	NZ_CP013927	Alteromonas stellipolaris strain LMG 21861 plasmid pASTE61-200, complete sequence	76269-76302	12	0.647

1. spacer 2.71|883866|37|CP001685|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019843 (Leptotrichia wadei strain JMUB3936 plasmid pJMUB3934p2, complete sequence) position: , mismatch: 0, identity: 1.0

caattctgctttttctatccagttctgaacatacagt	CRISPR spacer
caattctgctttttctatccagttctgaacatacagt	Protospacer
*************************************

2. spacer 2.68|883669|37|CP001685|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019825 (Leptotrichia hofstadii strain JCM16775 plasmid pJCM16775-2, complete sequence) position: , mismatch: 1, identity: 0.973

tttgtctataaggaaaatatggatatttttgaactgg	CRISPR spacer
tttgtctataaggataatatggatatttttgaactgg	Protospacer
************** **********************

3. spacer 2.76|884191|36|CP001685|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019843 (Leptotrichia wadei strain JMUB3936 plasmid pJMUB3934p2, complete sequence) position: , mismatch: 1, identity: 0.972

ggagaattgaagagcctttaaaaattctgaaggtac	CRISPR spacer
ggaaaattgaagagcctttaaaaattctgaaggtac	Protospacer
***.********************************

4. spacer 6.7|1617326|39|CP001685|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019847 (Leptotrichia hongkongensis strain JMUB5056 plasmid pJMUB5056, complete sequence) position: , mismatch: 1, identity: 0.974

ctgatttaacttttgctgtattaacatcacttaccgtat	CRISPR spacer
ctgatttaacttttgctgtgttaacatcacttaccgtat	Protospacer
*******************.*******************

5. spacer 6.7|1617326|39|CP001685|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019824 (Leptotrichia hofstadii strain JCM16775 plasmid pJCM16775-1, complete sequence) position: , mismatch: 1, identity: 0.974

ctgatttaacttttgctgtattaacatcacttaccgtat	CRISPR spacer
ctgatttaacttttgctgtgttaacatcacttaccgtat	Protospacer
*******************.*******************

6. spacer 6.7|1617326|39|CP001685|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019836 (Leptotrichia wadei strain JMUB3934 plasmid pJMUB3934p1, complete sequence) position: , mismatch: 1, identity: 0.974

ctgatttaacttttgctgtattaacatcacttaccgtat	CRISPR spacer
ctgatttaacttttgctggattaacatcacttaccgtat	Protospacer
****************** ********************

7. spacer 2.45|882182|35|CP001685|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019825 (Leptotrichia hofstadii strain JCM16775 plasmid pJCM16775-2, complete sequence) position: , mismatch: 2, identity: 0.943

ttttcactttctcgttgttgctgtttactaatgtt	CRISPR spacer
ttttcattttctcgttattgctgtttactaatgtt	Protospacer
******.*********.******************

8. spacer 6.7|1617326|39|CP001685|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019824 (Leptotrichia hofstadii strain JCM16775 plasmid pJCM16775-1, complete sequence) position: , mismatch: 2, identity: 0.949

ctgatttaacttttgctgtattaacatcacttaccgtat	CRISPR spacer
ccgatttaacttttgctgtgttaacatcacttaccgtat	Protospacer
*.*****************.*******************

9. spacer 6.7|1617326|39|CP001685|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019837 (Leptotrichia wadei strain JMUB3934 plasmid pJMUB3934p2, complete sequence) position: , mismatch: 2, identity: 0.949

ctgatttaacttttgctgtattaacatcacttaccgtat	CRISPR spacer
ctgattttacttttgctggattaacatcacttaccgtat	Protospacer
******* ********** ********************

10. spacer 6.7|1617326|39|CP001685|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019832 (Leptotrichia trevisanii strain JMUB3870 plasmid pJMUB3870-1, complete sequence) position: , mismatch: 2, identity: 0.949

ctgatttaacttttgctgtattaacatcacttaccgtat	CRISPR spacer
ccgatttaacttttgctgtgttaacatcacttaccgtat	Protospacer
*.*****************.*******************

11. spacer 2.80|884449|35|CP001685|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019825 (Leptotrichia hofstadii strain JCM16775 plasmid pJCM16775-2, complete sequence) position: , mismatch: 4, identity: 0.886

ccttttgagttataataatatcgccaaataaaatc	CRISPR spacer
ccttttgagttataataatatcgccaaacatatta	Protospacer
****************************.* * *

12. spacer 2.84|879846|23|CP001685|CRT matches to MK448384 (Streptococcus satellite phage Javan250, complete genome) position: , mismatch: 4, identity: 0.826

gcttttcaacccatttaatatcc	CRISPR spacer
tgttttcaacccatttaatataa	Protospacer
  *******************

13. spacer 2.24|880823|34|CP001685|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018879 (Bacillus megaterium strain JX285 plasmid 6, complete sequence) position: , mismatch: 5, identity: 0.853

ttttctctaattctttaatttttg--aatacaaact	CRISPR spacer
ttttctctaattcttttctttttgccaatagaaa--	Protospacer
****************  ******  **** ***

14. spacer 2.24|880823|34|CP001685|PILER-CR,CRISPRCasFinder,CRT matches to MF360958 (Salicola phage SCTP-2, complete genome) position: , mismatch: 6, identity: 0.824

ttttctctaattctttaatttttgaatacaaact	CRISPR spacer
atttaattaattctttaatttttgaatagaaatt	Protospacer
 ***  .********************* ***.*

15. spacer 2.40|881857|36|CP001685|PILER-CR,CRISPRCasFinder,CRT matches to MN694526 (Marine virus AFVG_250M936, complete genome) position: , mismatch: 7, identity: 0.806

--attcatttatataatcatattcttttaatttcttta	CRISPR spacer
ctaataatt--tagaatcatattcttttaatctctttt	Protospacer
  * * ***  ** *****************.*****

16. spacer 2.66|883540|35|CP001685|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP038620 (Arsenophonus nasoniae strain FIN plasmid pArsFIN8, complete sequence) position: , mismatch: 7, identity: 0.8

taaaaatttatttcttaaataatttcttaattctg	CRISPR spacer
taaaaatttatttgttaaataatttatttttcatt	Protospacer
************* *********** **  *. *

17. spacer 2.66|883540|35|CP001685|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR214986 (Mycoplasma cynos strain NCTC10142 plasmid 13) position: , mismatch: 7, identity: 0.8

taaaaatttatttcttaaataatttcttaattctg	CRISPR spacer
cataaatttatttcctaaataatctcttattgcag	Protospacer
.* ***********.********.***** * * *

18. spacer 4.1|1403035|37|CP001685|CRISPRCasFinder,CRT matches to NZ_CP045959 (Salmonella enterica subsp. enterica serovar Birkenhead strain AUSMDU00010532 plasmid pAUSMDU00010532_01, complete sequence) position: , mismatch: 7, identity: 0.811

tttagtaggacctagtggctcaggaaaatccactatt	CRISPR spacer
tttgacaggccctagtggctcaggaaaatcaacgctt	Protospacer
***...*** ******************** **  **

19. spacer 4.1|1403035|37|CP001685|CRISPRCasFinder,CRT matches to NZ_AP017611 (Escherichia coli strain 20Ec-P-124 plasmid pMRY16-002_1, complete sequence) position: , mismatch: 8, identity: 0.784

tttagtaggacctagtggctcaggaaaatccactatt	CRISPR spacer
attaaccggacccagtggttcaggaaaatccaccctt	Protospacer
 ***.. *****.*****.**************. **

20. spacer 4.1|1403035|37|CP001685|CRISPRCasFinder,CRT matches to NC_025179 (Escherichia coli plasmid pC59-153, complete sequence) position: , mismatch: 8, identity: 0.784

tttagtaggacctagtggctcaggaaaatccactatt	CRISPR spacer
attaaccggacccagtggttcaggaaaatccaccctt	Protospacer
 ***.. *****.*****.**************. **

21. spacer 4.1|1403035|37|CP001685|CRISPRCasFinder,CRT matches to NZ_CP047577 (Escherichia coli strain 94EC plasmid p94EC-1, complete sequence) position: , mismatch: 8, identity: 0.784

tttagtaggacctagtggctcaggaaaatccactatt	CRISPR spacer
attaaccggacccagtggttcaggaaaatccaccctt	Protospacer
 ***.. *****.*****.**************. **

22. spacer 4.1|1403035|37|CP001685|CRISPRCasFinder,CRT matches to NC_020271 (Escherichia coli O25b:H4-ST131 str. EC958 strain ST131 plasmid pJIE186-2, complete sequence) position: , mismatch: 8, identity: 0.784

tttagtaggacctagtggctcaggaaaatccactatt	CRISPR spacer
attaaccggacccagtggttcaggaaaatccaccctt	Protospacer
 ***.. *****.*****.**************. **

23. spacer 4.1|1403035|37|CP001685|CRISPRCasFinder,CRT matches to NZ_CP031107 (Escherichia coli strain AMSCJX02 plasmid pAMSC2, complete sequence) position: , mismatch: 8, identity: 0.784

tttagtaggacctagtggctcaggaaaatccactatt	CRISPR spacer
attaaccggacccagtggttcaggaaaatccaccctt	Protospacer
 ***.. *****.*****.**************. **

24. spacer 4.1|1403035|37|CP001685|CRISPRCasFinder,CRT matches to NZ_CP010127 (Escherichia coli strain C8 plasmid B, complete genome) position: , mismatch: 8, identity: 0.784

tttagtaggacctagtggctcaggaaaatccactatt	CRISPR spacer
attaaccggacccagtggttcaggaaaatccaccctt	Protospacer
 ***.. *****.*****.**************. **

25. spacer 4.1|1403035|37|CP001685|CRISPRCasFinder,CRT matches to NZ_CP019055 (Escherichia coli strain CRE1540 plasmid p1540-4, complete sequence) position: , mismatch: 8, identity: 0.784

tttagtaggacctagtggctcaggaaaatccactatt	CRISPR spacer
attaaccggacccagtggttcaggaaaatccaccctt	Protospacer
 ***.. *****.*****.**************. **

26. spacer 4.1|1403035|37|CP001685|CRISPRCasFinder,CRT matches to NZ_MG825378 (Escherichia coli strain 1108 plasmid p1108-IncFIB, complete sequence) position: , mismatch: 8, identity: 0.784

tttagtaggacctagtggctcaggaaaatccactatt	CRISPR spacer
attaaccggacccagtggttcaggaaaatccaccctt	Protospacer
 ***.. *****.*****.**************. **

27. spacer 2.6|879652|35|CP001685|PILER-CR,CRISPRCasFinder,CRT,CRT matches to MN855879 (Siphoviridae sp. isolate 341, complete genome) position: , mismatch: 9, identity: 0.743

caagtatctaccatctgcatctttccacaatttca	CRISPR spacer
caggtatctaccctctgcatctttcatttttgaca	Protospacer
**.********* ************  .  *  **

28. spacer 2.40|881857|36|CP001685|PILER-CR,CRISPRCasFinder,CRT matches to NC_011250 (Borrelia duttonii Ly plasmid pl40, complete sequence) position: , mismatch: 9, identity: 0.75

attcatttatataatcatattcttttaatttcttta	CRISPR spacer
ctatttttatataatgatatgcttttaatttacttg	Protospacer
 * . ********** **** ********** .**.

29. spacer 2.52|882633|36|CP001685|PILER-CR,CRISPRCasFinder,CRT matches to KU878088 (Bacillus phage AR9, complete genome) position: , mismatch: 9, identity: 0.75

tgatattaagagaaaagatttggaagatgctttatt	CRISPR spacer
tgatattaagagaaaagatattgaagataaagttga	Protospacer
******************* * ******.   *

30. spacer 2.52|882633|36|CP001685|PILER-CR,CRISPRCasFinder,CRT matches to MF360957 (Bacillus virus PBS1, complete genome) position: , mismatch: 9, identity: 0.75

tgatattaagagaaaagatttggaagatgctttatt	CRISPR spacer
tgatattaagagaaaagatattgaagataaagttga	Protospacer
******************* * ******.   *

31. spacer 2.66|883540|35|CP001685|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP018257 (Calothrix sp. NIES-4071 plasmid plasmid2 DNA, complete genome) position: , mismatch: 9, identity: 0.743

taaaaatttatttcttaaataatttcttaattctg---	CRISPR spacer
taaaaatttaatttttaaataatttt---atttgaaaa	Protospacer
********** **.***********.   ***. .

32. spacer 2.67|883604|36|CP001685|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KU302800 (Enterobacter cloacae strain SZECL1 plasmid pKPC3_SZ clone ST231, complete sequence) position: , mismatch: 9, identity: 0.75

gttgggaggacgaataatgagagaaataaaatttag	CRISPR spacer
atcaggaggacgagtaatgatagaaataaaacggac	Protospacer
.*..*********.****** **********.  *

33. spacer 2.67|883604|36|CP001685|PILER-CR,CRISPRCasFinder,CRT matches to NC_015068 (Yersinia pestis Java 9 plasmid pJARS36, complete sequence) position: , mismatch: 9, identity: 0.75

gttgggaggacgaataatgagagaaataaaatttag	CRISPR spacer
atcaggaggacgagtaatgatagaaataaaacggac	Protospacer
.*..*********.****** **********.  *

34. spacer 2.67|883604|36|CP001685|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042976 (Klebsiella pneumoniae strain KPN55602 plasmid pK55602_2, complete sequence) position: , mismatch: 9, identity: 0.75

gttgggaggacgaataatgagagaaataaaatttag	CRISPR spacer
atcaggaggacgagtaatgatagaaataaaacggac	Protospacer
.*..*********.****** **********.  *

35. spacer 2.67|883604|36|CP001685|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MF156712 (Morganella morganii strain GN28 plasmid pGN28-KPC, complete sequence) position: , mismatch: 9, identity: 0.75

gttgggaggacgaataatgagagaaataaaatttag	CRISPR spacer
atcaggaggacgagtaatgatagaaataaaacggac	Protospacer
.*..*********.****** **********.  *

36. spacer 2.67|883604|36|CP001685|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MF156709 (Klebsiella aerogenes strain E20 plasmid pE20-KPC, complete sequence) position: , mismatch: 9, identity: 0.75

gttgggaggacgaataatgagagaaataaaatttag	CRISPR spacer
atcaggaggacgagtaatgatagaaataaaacggac	Protospacer
.*..*********.****** **********.  *

37. spacer 2.67|883604|36|CP001685|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MF156710 (Proteus mirabilis strain GN2 plasmid pGN2-KPC, complete sequence) position: , mismatch: 9, identity: 0.75

gttgggaggacgaataatgagagaaataaaatttag	CRISPR spacer
atcaggaggacgagtaatgatagaaataaaacggac	Protospacer
.*..*********.****** **********.  *

38. spacer 2.67|883604|36|CP001685|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MF156711 (Serratia marcescens strain GN26 plasmid pGN26-KPC, complete sequence) position: , mismatch: 9, identity: 0.75

gttgggaggacgaataatgagagaaataaaatttag	CRISPR spacer
atcaggaggacgagtaatgatagaaataaaacggac	Protospacer
.*..*********.****** **********.  *

39. spacer 2.81|884513|35|CP001685|PILER-CR,CRISPRCasFinder,CRT matches to LC377538 (Staphylococcus aureus plasmid pNTUH_3874 NTUH_3874 DNA, complete sequence) position: , mismatch: 9, identity: 0.743

-------tttttatcacataattctaatgaataattatcaaa	CRISPR spacer
agagaaattt-------ataattctaatgaataattaggaaa	Protospacer
       ***       ********************  ***

40. spacer 2.81|884513|35|CP001685|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP047806 (Staphylococcus aureus strain UP_1654 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.743

-------tttttatcacataattctaatgaataattatcaaa	CRISPR spacer
agagaaattt-------ataattctaatgaataattaggaaa	Protospacer
       ***       ********************  ***

41. spacer 4.1|1403035|37|CP001685|CRISPRCasFinder,CRT matches to NZ_CP034950 (Enterococcus faecium strain NM213 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.757

tttagtaggacctagtggctcaggaaaatccactatt	CRISPR spacer
gatcatgggacctagtggctcaggaaaatctacctta	Protospacer
  * .*.***********************.**. *

42. spacer 2.30|881209|36|CP001685|PILER-CR,CRISPRCasFinder,CRT matches to LR215721 (Staphylococcus phage Stab22 genome assembly, chromosome: I) position: , mismatch: 10, identity: 0.722

ttattcaacatctccttatagtttttattaattttt	CRISPR spacer
atgttcaacatctcctaatagtttatattagagaag	Protospacer
 *.************* ******* *****.

43. spacer 2.30|881209|36|CP001685|PILER-CR,CRISPRCasFinder,CRT matches to LR215721 (Staphylococcus phage Stab22 genome assembly, chromosome: I) position: , mismatch: 10, identity: 0.722

ttattcaacatctccttatagtttttattaattttt	CRISPR spacer
atgttcaacatctcctaatagtttatattagagaag	Protospacer
 *.************* ******* *****.

44. spacer 2.50|882505|35|CP001685|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020744 (Bacillus mycoides strain Gnyt1 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.714

atacaaatagaagtagttgctaacaataacaataa	CRISPR spacer
taaatcatagaaatagttgctagcaataacagaac	Protospacer
  *   ******.*********.********. *

45. spacer 2.57|882955|36|CP001685|PILER-CR,CRISPRCasFinder,CRT matches to NC_018878 (Bacillus thuringiensis Bt407 plasmid BTB_502p, complete sequence) position: , mismatch: 10, identity: 0.722

caatttcgtgcagtaagtcatcttctttcttttcat	CRISPR spacer
ttagatattgaagtaagtcatcttcttgcttttcga	Protospacer
. *  *  ** **************** ******.

46. spacer 2.61|883215|36|CP001685|PILER-CR,CRISPRCasFinder,CRT matches to NC_015426 (Clostridium botulinum BKT015925 plasmid p2BKT015925, complete sequence) position: , mismatch: 10, identity: 0.722

ttactcaatc--atataatttaaatgataatatgtttg	CRISPR spacer
--gttggactaaatataatttatatgataataagtttg	Protospacer
  ..* .*..  ********** ********* *****

47. spacer 2.61|883215|36|CP001685|PILER-CR,CRISPRCasFinder,CRT matches to KT895374 (Bacillus phage vB_BpuM-BpSp, complete genome) position: , mismatch: 10, identity: 0.722

ttactcaatcatataatttaaatgataatatgtttg	CRISPR spacer
atcctgaatcatatactttaaatgataattttcgga	Protospacer
 * ** ********* ************* * .  .

48. spacer 2.66|883540|35|CP001685|PILER-CR,CRISPRCasFinder,CRT matches to NC_047721 (Staphylococcus phage SA5, complete genome) position: , mismatch: 10, identity: 0.714

taaaaatttatttcttaaataatttcttaattctg	CRISPR spacer
cactaatttatttattaaataattttttatataaa	Protospacer
.*  ********* ***********.***  *  .

49. spacer 2.66|883540|35|CP001685|PILER-CR,CRISPRCasFinder,CRT matches to MK331930 (Staphylococcus phage CH1, complete genome) position: , mismatch: 10, identity: 0.714

taaaaatttatttcttaaataatttcttaattctg	CRISPR spacer
cactaatttatttattaaataattttttatataaa	Protospacer
.*  ********* ***********.***  *  .

50. spacer 2.16|880303|36|CP001685|PILER-CR,CRISPRCasFinder,CRT matches to HG796786 (Uncultured bacterium plasmid pRGF00028) position: , mismatch: 11, identity: 0.694

gcctgttaaggacttcaacaagtttttcgttttgtg	CRISPR spacer
cagtcttcaggacttcaacaagtttctcgttccaat	Protospacer
   * ** *****************.*****...

51. spacer 2.24|880823|34|CP001685|PILER-CR,CRISPRCasFinder,CRT matches to NC_023688 (Aeromonas phage PX29, complete genome) position: , mismatch: 11, identity: 0.676

ttttctctaattctttaatttttgaatacaaact	CRISPR spacer
cattctccaattctttaatttgtgaacttttaag	Protospacer
. *****.************* ****. .  *

52. spacer 2.24|880823|34|CP001685|PILER-CR,CRISPRCasFinder,CRT matches to MH791407 (UNVERIFIED: Aeromonas phage AsFcp_4, partial genome) position: , mismatch: 11, identity: 0.676

ttttctctaattctttaatttttgaatacaaact	CRISPR spacer
cattctccaattctttaatttgtgaacttttaag	Protospacer
. *****.************* ****. .  *

53. spacer 2.24|880823|34|CP001685|PILER-CR,CRISPRCasFinder,CRT matches to MH791401 (UNVERIFIED: Aeromonas phage AsFcp_2, complete genome) position: , mismatch: 11, identity: 0.676

ttttctctaattctttaatttttgaatacaaact	CRISPR spacer
cattctccaattctttaatttgtgaacttttaag	Protospacer
. *****.************* ****. .  *

54. spacer 2.24|880823|34|CP001685|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013927 (Alteromonas stellipolaris strain LMG 21861 plasmid pASTE61-200, complete sequence) position: , mismatch: 12, identity: 0.647

ttttctctaattctttaatttttgaatacaaact	CRISPR spacer
caaatctgaatttttcaatttttgaatacaaagg	Protospacer
.   ... ****.**.****************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1643658 : 1650702

Staphylococcus_phage(50.0%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
ACV39427.1\|1643658_1644570_-	transcriptional regulator, LysR family	A0A2P0ZL89	Lactobacillus_phage	6.2e-07	29.7
ACV39428.1\|1644864_1645647_+	conserved hypothetical protein	NA	NA	NA	NA
ACV39429.1\|1645761_1646778_+	aspartate/ammonia ligase	A0A1C9C5F0	Heterosigma_akashiwo_virus	4.4e-62	40.8
ACV39430.1\|1646844_1648065_-	3,4-dihydroxy-2-butanone 4-phosphate synthase	A0A2H4PQS2	Staphylococcus_phage	5.6e-112	52.4
ACV39431.1\|1648096_1648786_-	riboflavin synthase, alpha subunit	A0A2H4PQS5	Staphylococcus_phage	1.3e-28	38.9
ACV39432.1\|1649035_1650151_-	riboflavin biosynthesis protein RibD	A0A1V0SE20	Indivirus	3.2e-45	36.7
ACV39433.1\|1650237_1650702_-	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	1.6e-43	57.3

DBSCAN-SWA_2

2290861 : 2296540

Synechococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
ACV40001.1\|2290861_2291836_-	Glucan endo-1,3-beta-D-glucosidase	M1HRU7	Paramecium_bursaria_Chlorella_virus	1.8e-12	25.7
ACV40002.1\|2291832_2292558_-	glycosyl transferase family 2	NA	NA	NA	NA
ACV40003.1\|2292558_2293386_-	glycosyltransferase	NA	NA	NA	NA
ACV40004.1\|2293466_2294207_-	nucleotidyl transferase	A0A1D8KNV9	Synechococcus_phage	1.2e-61	51.7
ACV40005.1\|2294223_2294544_-	conserved hypothetical protein	A0A222YXE6	Synechococcus_phage	7.2e-11	32.7
ACV40006.1\|2294543_2295266_-	putative nucleotidyltransferase	A0A1D8KNV9	Synechococcus_phage	4.3e-35	33.9
ACV40007.1\|2295266_2295896_-	HAD-superfamily hydrolase, subfamily IA, variant 3	M1I080	Acanthocystis_turfacea_Chlorella_virus	7.2e-39	46.0
ACV40008.1\|2295895_2296540_-	conserved hypothetical protein	A0A2H4UUJ1	Bodo_saltans_virus	9.7e-15	35.6

Anti-CRISPR protein detection

Acr_ID: CP001685.1|ACV38081.1|156107_156710_+|unknown-phage-protein

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Acr_ID: CP001685.1|ACV38859.1|1049794_1050376_-|unknown-phage-protein

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Acr_ID: CP001685.1|ACV38861.1|1050594_1051050_-|hypothetical-protein

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Acr_ID: CP001685.1|ACV38862.1|1051085_1051655_-|unknown-phage-protein

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Acr_ID: CP001685.1|ACV39640.1|1848257_1848845_-|unknown-phage-protein

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Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

CP001685.1|ACV38081.1|156107_156710_+|unknown-phage-protein

156107_156710_+

200 aa aa

AcrIB

hit_Aca_id	identity	query_coverage	hit_coverage
anti_CRISPR3666\|ACV38859.1\|AcrIB\|I-B\|Verified\|Leptotrichia-buccalis-C-1013-b	0.4742268041237113	0.955	0.9896373056994818

CP001685.1|ACV38859.1|1049794_1050376_-|unknown-phage-protein

1049794_1050376_-

193 aa aa

AcrIB

hit_Aca_id	identity	query_coverage	hit_coverage
anti_CRISPR3666\|ACV38859.1\|AcrIB\|I-B\|Verified\|Leptotrichia-buccalis-C-1013-b	1.0	1	1.0

CP001685.1|ACV38861.1|1050594_1051050_-|hypothetical-protein

1050594_1051050_-

151 aa aa

AcrVIA7

hit_Aca_id	identity	query_coverage	hit_coverage
anti_CRISPR3663\|ACV38861.1\|AcrVIA7\|VI-A\|Verified\|Leptotrichia-buccalis-C-1013-b	1.0	1	1.0

CP001685.1|ACV38862.1|1051085_1051655_-|unknown-phage-protein

1051085_1051655_-

189 aa aa

AcrIB

hit_Aca_id	identity	query_coverage	hit_coverage
anti_CRISPR3666\|ACV38859.1\|AcrIB\|I-B\|Verified\|Leptotrichia-buccalis-C-1013-b	0.5132275132275133	0.9735449735449735	0.9792746113989638

CP001685.1|ACV39640.1|1848257_1848845_-|unknown-phage-protein

1848257_1848845_-

195 aa aa

AcrIB

hit_Aca_id	identity	query_coverage	hit_coverage
anti_CRISPR3666\|ACV38859.1\|AcrIB\|I-B\|Verified\|Leptotrichia-buccalis-C-1013-b	0.47058823529411764	0.9641025641025641	0.9637305699481865

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP001685

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

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