Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NC_004368 Streptococcus agalactiae NEM316, complete genome 2 crisprs cas3,DinG,cas9,cas1,cas2,csn2,csm6,DEDDh,WYL,csa3 0 12 4 1

Results visualization

1. NC_004368
Click the left colored region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_004368_1 951908-952801 TypeII II-A
13 spacers
csn2,cas2,cas1,cas9

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_004368_2 1191273-1191348 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NC_004368_1 1.3|952076|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952076-952105 30 MK448749 Streptococcus phage Javan39, complete genome 20005-20034 0 1.0
NC_004368_1 1.3|952076|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952076-952105 30 MH853356 Streptococcus phage LF2, partial genome 43016-43045 0 1.0
NC_004368_1 1.10|952538|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952538-952567 30 MK448742 Streptococcus phage Javan37, complete genome 28973-29002 0 1.0
NC_004368_1 1.5|952208|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952208-952237 30 MK448742 Streptococcus phage Javan37, complete genome 29903-29932 1 0.967
NC_004368_1 1.5|952208|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952208-952237 30 MK448851 Streptococcus phage Javan14, complete genome 33850-33879 1 0.967
NC_004368_1 1.10|952538|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952538-952567 30 MK448956 Streptococcus phage Javan48, complete genome 32279-32308 1 0.967
NC_004368_1 1.2|952010|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952010-952039 30 MK448796 Streptococcus phage Javan53, complete genome 36041-36070 2 0.933
NC_004368_1 1.2|952010|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952010-952039 30 MK448971 Streptococcus phage Javan52, complete genome 32226-32255 2 0.933
NC_004368_1 1.2|952010|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952010-952039 30 MK448829 Streptococcus phage Javan7, complete genome 26921-26950 2 0.933
NC_004368_1 1.2|952010|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952010-952039 30 MK448956 Streptococcus phage Javan48, complete genome 30545-30574 2 0.933
NC_004368_1 1.2|952010|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952010-952039 30 MH853355 Streptococcus phage LF1, complete genome 17778-17807 2 0.933
NC_004368_1 1.2|952010|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952010-952039 30 MH853358 Streptococcus phage LF4, complete genome 17778-17807 2 0.933
NC_004368_1 1.4|952142|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952142-952171 30 JX409894 Streptococcus phage LYGO9, complete genome 31844-31873 2 0.933
NC_004368_1 1.4|952142|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952142-952171 30 JX409895 Streptococcus phage JX01, complete genome 662-691 2 0.933
NC_004368_1 1.5|952208|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952208-952237 30 MK448956 Streptococcus phage Javan48, complete genome 33209-33238 2 0.933
NC_004368_1 1.9|952472|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952472-952501 30 MK448924 Streptococcus phage Javan384, complete genome 7947-7976 2 0.933
NC_004368_1 1.10|952538|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952538-952567 30 MK448796 Streptococcus phage Javan53, complete genome 37775-37804 2 0.933
NC_004368_1 1.2|952010|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952010-952039 30 MK448837 Streptococcus phage Javan10, complete genome 25450-25479 3 0.9
NC_004368_1 1.2|952010|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952010-952039 30 MK448742 Streptococcus phage Javan37, complete genome 27241-27270 3 0.9
NC_004368_1 1.2|952010|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952010-952039 30 MK448851 Streptococcus phage Javan14, complete genome 31180-31209 3 0.9
NC_004368_1 1.3|952076|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952076-952105 30 MK448859 Streptococcus phage Javan170, complete genome 20220-20249 3 0.9
NC_004368_1 1.3|952076|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952076-952105 30 MK448690 Streptococcus phage Javan169, complete genome 20578-20607 3 0.9
NC_004368_1 1.3|952076|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952076-952105 30 MK448850 Streptococcus phage Javan132, complete genome 19807-19836 3 0.9
NC_004368_1 1.3|952076|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952076-952105 30 MK448676 Streptococcus phage Javan131, complete genome 22730-22759 3 0.9
NC_004368_1 1.3|952076|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952076-952105 30 MK448688 Streptococcus phage Javan161, complete genome 20173-20202 3 0.9
NC_004368_1 1.3|952076|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952076-952105 30 MK448973 Streptococcus phage Javan522, complete genome 19671-19700 3 0.9
NC_004368_1 1.3|952076|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952076-952105 30 MK448955 Streptococcus phage Javan478, complete genome 21048-21077 3 0.9
NC_004368_1 1.3|952076|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952076-952105 30 MK448778 Streptococcus phage Javan493, complete genome 19213-19242 3 0.9
NC_004368_1 1.3|952076|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952076-952105 30 MK448962 Streptococcus phage Javan496, complete genome 9204-9233 3 0.9
NC_004368_1 1.3|952076|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952076-952105 30 MK448975 Streptococcus phage Javan526, complete genome 19995-20024 3 0.9
NC_004368_1 1.3|952076|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952076-952105 30 MK448782 Streptococcus phage Javan501, complete genome 22353-22382 3 0.9
NC_004368_1 1.9|952472|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952472-952501 30 AJ609634 Bacteriophage EJ-1 proviral DNA, complete genome 10413-10442 3 0.9
NC_004368_1 1.9|952472|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952472-952501 30 NC_005294 Streptococcus prophage EJ-1, complete genome 10413-10442 3 0.9
NC_004368_1 1.2|952010|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952010-952039 30 MK448749 Streptococcus phage Javan39, complete genome 31818-31847 4 0.867
NC_004368_1 1.2|952010|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952010-952039 30 MH853356 Streptococcus phage LF2, partial genome 31159-31188 4 0.867
NC_004368_1 1.3|952076|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952076-952105 30 JX409894 Streptococcus phage LYGO9, complete genome 28656-28685 4 0.867
NC_004368_1 1.3|952076|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952076-952105 30 MK448675 Streptococcus phage Javan129, complete genome 20470-20499 4 0.867
NC_004368_1 1.3|952076|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952076-952105 30 JX409895 Streptococcus phage JX01, complete genome 40503-40532 4 0.867
NC_004368_1 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952670-952699 30 KC465899 Pelagibacter phage HTVC008M, complete genome 125202-125231 4 0.867
NC_004368_1 1.5|952208|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952208-952237 30 AP014287 Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S24-C25, *** SEQUENCING IN PROGRESS *** 29553-29582 6 0.8
NC_004368_1 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952670-952699 30 NZ_CP035396 Bacillus subtilis strain SRCM103697 plasmid unnamed1, complete sequence 5260-5289 6 0.8
NC_004368_1 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952670-952699 30 NZ_CP032856 Bacillus subtilis subsp. subtilis strain PJ-7 plasmid unnamed1, complete sequence 45542-45571 6 0.8
NC_004368_1 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952670-952699 30 NZ_MG557999 Escherichia coli strain Eco-36682cz plasmid pEco-36682cz, complete sequence 51740-51769 6 0.8
NC_004368_1 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952670-952699 30 NZ_MF497781 Citrobacter freundii strain Cfr-36049cz plasmid pCrf-36049cz, complete sequence 51740-51769 6 0.8
NC_004368_1 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952670-952699 30 MT074138 Bacteroides phage DAC17, complete genome 95749-95778 6 0.8
NC_004368_1 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952670-952699 30 MT074136 Bacteroides phage DAC15, complete genome 96339-96368 6 0.8
NC_004368_1 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952670-952699 30 NZ_CP046030 Staphylococcus chromogenes strain 1401 plasmid unnamed2, complete sequence 15565-15594 6 0.8
NC_004368_1 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952670-952699 30 AP014166 Uncultured Mediterranean phage uvMED isolate uvMED-GF-C61-MedDCM-OCT-S46-C82, *** SEQUENCING IN PROGRESS *** 5438-5467 6 0.8
NC_004368_1 1.1|951944|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 951944-951973 30 NC_004534 Corynebacterium glutamicum plasmid pCG2, complete sequence 2537-2566 7 0.767
NC_004368_1 1.5|952208|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952208-952237 30 NC_012530 Lactobacillus phage Lb338-1, complete genome 12604-12633 7 0.767
NC_004368_1 1.7|952340|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952340-952369 30 NZ_CP028120 Escherichia coli O43 str. RM10042 plasmid pRM10042-1, complete sequence 45471-45500 7 0.767
NC_004368_1 1.7|952340|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952340-952369 30 NZ_CP033633 Escherichia coli isolate ECCNB12-2 plasmid pTB-nb2, complete sequence 135584-135613 7 0.767
NC_004368_1 1.8|952406|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952406-952435 30 NZ_CP028120 Escherichia coli O43 str. RM10042 plasmid pRM10042-1, complete sequence 45471-45500 7 0.767
NC_004368_1 1.8|952406|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952406-952435 30 NZ_CP033633 Escherichia coli isolate ECCNB12-2 plasmid pTB-nb2, complete sequence 135584-135613 7 0.767
NC_004368_1 1.9|952472|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952472-952501 30 NZ_CP044019 Acinetobacter indicus strain HY20 plasmid pAI01, complete sequence 64701-64730 7 0.767
NC_004368_1 1.9|952472|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952472-952501 30 MN855940 Myoviridae sp. isolate 64, complete genome 2455-2484 7 0.767
NC_004368_1 1.9|952472|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952472-952501 30 CAJCJZ010000002 Enterococcus phage vB_EfaS_140 genome assembly, contig: phage140-genome, whole genome shotgun sequence 37602-37631 7 0.767
NC_004368_1 1.9|952472|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952472-952501 30 MT119360 Enterococcus phage nattely, complete genome 46883-46912 7 0.767
NC_004368_1 1.11|952604|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952604-952633 30 MT778840 Rhizobium phage P11VFA, complete genome 28085-28114 7 0.767
NC_004368_1 1.11|952604|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952604-952633 30 KF614509 Rhizobium phage vB_RleS_L338C, complete genome 63260-63289 7 0.767
NC_004368_1 1.11|952604|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952604-952633 30 MF417890 Uncultured Caudovirales phage clone 7F_15, partial genome 31755-31784 7 0.767
NC_004368_1 1.11|952604|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952604-952633 30 MF417953 Uncultured Caudovirales phage clone 7S_15, partial genome 5050-5079 7 0.767
NC_004368_1 1.11|952604|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952604-952633 30 GU557055 Puniceispirillum phage HMO-2011, complete genome 33660-33689 7 0.767
NC_004368_1 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952670-952699 30 NZ_KR091915 Klebsiella pneumoniae strain KPC-DK05 plasmid pKPC-DK05, complete sequence 42923-42952 7 0.767
NC_004368_1 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952670-952699 30 NZ_CP025915 Escherichia coli strain 203740 plasmid p203740_35, complete sequence 8594-8623 7 0.767
NC_004368_1 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952670-952699 30 NZ_LS999564 Escherichia coli isolate EC-TO143 plasmid 5, complete sequence 682-711 7 0.767
NC_004368_1 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952670-952699 30 NZ_LN824136 Klebsiella pneumoniae genome assembly MS6671.v1, plasmid : _Plasmid_C_Kpneumoniae_MS6671 16675-16704 7 0.767
NC_004368_1 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952670-952699 30 NZ_CP054370 Escherichia coli strain SCU-115 plasmid pSCU-115-2, complete sequence 19258-19287 7 0.767
NC_004368_1 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952670-952699 30 NZ_CP006640 Escherichia coli PCN061 plasmid PCN061p4, complete sequence 5957-5986 7 0.767
NC_004368_1 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952670-952699 30 NZ_CP029801 Salmonella enterica subsp. enterica serovar Anatum strain R16.0676 plasmid pR16.0676_34k, complete sequence 7884-7913 7 0.767
NC_004368_1 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952670-952699 30 NZ_CP015505 Klebsiella pneumoniae strain SKGH01 plasmid unnamed 5, complete sequence 27842-27871 7 0.767
NC_004368_1 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952670-952699 30 NZ_CP026060 Proteus mirabilis strain FDAARGOS_80 plasmid unnamed1, complete sequence 16877-16906 7 0.767
NC_004368_1 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952670-952699 30 NZ_CP024853 Escherichia coli strain AR_0006 plasmid tig00000176, complete sequence 326-355 7 0.767
NC_004368_1 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952670-952699 30 NZ_LT985287 Escherichia coli strain RPC3 plasmid RCS69_pI, complete sequence 31253-31282 7 0.767
NC_004368_1 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952670-952699 30 NZ_CP028999 Klebsiella pneumoniae strain AR_0079 plasmid unnamed2, complete sequence 14730-14759 7 0.767
NC_004368_1 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952670-952699 30 NZ_CP027258 Escherichia coli strain EC11 plasmid unnamed3, complete sequence 21718-21747 7 0.767
NC_004368_1 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952670-952699 30 NZ_CP019200 Salmonella enterica subsp. enterica serovar Muenster str. 0315 plasmid pCFSAN001297_01, complete sequence 31777-31806 7 0.767
NC_004368_1 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952670-952699 30 NZ_CP023823 Escherichia coli strain 7/2 plasmid p7_2.3, complete sequence 16675-16704 7 0.767
NC_004368_1 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952670-952699 30 NZ_CP026025 Klebsiella pneumoniae strain 11420 plasmid p11420-KPC, complete sequence 33042-33071 7 0.767
NC_004368_1 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952670-952699 30 NZ_CP018988 Escherichia coli strain Ecol_AZ146 plasmid pECAZ146_3, complete sequence 682-711 7 0.767
NC_004368_1 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952670-952699 30 NZ_MK033500 Salmonella enterica subsp. enterica serovar Anatum strain R13.0957_pConj58k plasmid pConj58k, complete sequence 7491-7520 7 0.767
NC_004368_1 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952670-952699 30 NZ_MK033501 Salmonella enterica subsp. enterica serovar Anatum strain R13.0957_pConj83k plasmid pConj83k, complete sequence 55790-55819 7 0.767
NC_004368_1 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952670-952699 30 NZ_MK033499 Escherichia coli strain C600_pConj125k plasmid pConj125k, complete sequence 107898-107927 7 0.767
NC_004368_1 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952670-952699 30 MN693256 Marine virus AFVG_25M339, complete genome 27548-27577 7 0.767
NC_004368_1 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952670-952699 30 NZ_LR215001 Mycoplasma conjunctivae strain NCTC10147 plasmid 5 7233-7262 7 0.767
NC_004368_1 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952670-952699 30 MN855807 Siphoviridae sp. isolate 122, partial genome 13518-13547 7 0.767
NC_004368_1 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952670-952699 30 FJ429185 Lactococcus phage P087, complete genome 18714-18743 7 0.767
NC_004368_1 1.5|952208|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952208-952237 30 MN871480 UNVERIFIED: Pseudomonas phage PaSz-1_45_270k, complete genome 229744-229773 8 0.733
NC_004368_1 1.5|952208|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952208-952237 30 MT001829 Salmonella phage SE_PL, complete genome 257363-257392 8 0.733
NC_004368_1 1.5|952208|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952208-952237 30 DI373487 KR 1020130142837-A/1: Bacteriophage of Pseudomonas aeruginosa and uses thereof 253719-253748 8 0.733
NC_004368_1 1.5|952208|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952208-952237 30 MK773491 Salmonella phage 7t3, complete genome 91373-91402 8 0.733
NC_004368_1 1.5|952208|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952208-952237 30 MN871489 UNVERIFIED: Pseudomonas phage PaZh_1, complete genome 261622-261651 8 0.733
NC_004368_1 1.5|952208|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952208-952237 30 NC_042081 Pseudomonas phage SL2, complete genome 232282-232311 8 0.733
NC_004368_1 1.5|952208|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952208-952237 30 MK268344 Salmonella phage Munch, complete genome 28685-28714 8 0.733
NC_004368_1 1.5|952208|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952208-952237 30 NC_042060 Pseudomonas phage PA7, partial genome 253719-253748 8 0.733
NC_004368_1 1.5|952208|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952208-952237 30 NC_004629 Pseudomonas phage phiKZ, complete genome 52347-52376 8 0.733
NC_004368_1 1.7|952340|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952340-952369 30 NC_014502 Gloeothece verrucosa PCC 7822 plasmid Cy782203, complete sequence 95768-95797 8 0.733
NC_004368_1 1.8|952406|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952406-952435 30 NC_014502 Gloeothece verrucosa PCC 7822 plasmid Cy782203, complete sequence 95768-95797 8 0.733
NC_004368_1 1.9|952472|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952472-952501 30 MK448665 Streptococcus phage Javan1, complete genome 31865-31894 8 0.733
NC_004368_1 1.9|952472|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952472-952501 30 NZ_CP053834 Arcobacter cloacae strain LMG 26153 plasmid pACLO, complete sequence 102759-102788 8 0.733
NC_004368_1 1.11|952604|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952604-952633 30 NC_008201 Mannheimia phage phiMHaA1, complete genome 22041-22070 8 0.733
NC_004368_1 1.11|952604|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952604-952633 30 DQ426905 Bacteriophage phi-MhaA1-BAA410, complete genome 22116-22145 8 0.733
NC_004368_1 1.11|952604|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952604-952633 30 KP137432 Mannheimia phage vB_MhM_535AP1, complete genome 22081-22110 8 0.733
NC_004368_1 1.11|952604|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952604-952633 30 JN255163 Mannheimia phage vB_MhM_1152AP, complete genome 22277-22306 8 0.733
NC_004368_1 1.11|952604|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952604-952633 30 KP137438 Mannheimia phage vB_MhM_2256AP1, complete genome 22442-22471 8 0.733
NC_004368_1 1.11|952604|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952604-952633 30 DQ426904 Bacteriophage phi-MhaA1-PHL101, complete genome 22041-22070 8 0.733
NC_004368_1 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952670-952699 30 NZ_CP039286 Leptospira interrogans strain FMAS_AW1 plasmid pLiSL3, complete sequence 70939-70968 8 0.733
NC_004368_1 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952670-952699 30 NZ_CP012103 Bacillus thuringiensis strain HS18-1 plasmid pHS18-4, complete sequence 20110-20139 8 0.733
NC_004368_1 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952670-952699 30 NZ_LR214953 Mycoplasma neurolyticum strain NCTC10166 plasmid 3 5510-5539 8 0.733
NC_004368_1 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952670-952699 30 NZ_CP009352 Francisella tularensis subsp. novicida F6168 plasmid unnamed, complete sequence 2297-2326 8 0.733
NC_004368_1 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952670-952699 30 NZ_CP051681 Cohnella sp. MFER-1 plasmid unnamed1 74376-74405 8 0.733
NC_004368_1 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952670-952699 30 NC_004952 Francisella novicida plasmid pFNL10, complete sequence 110-139 8 0.733
NC_004368_1 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952670-952699 30 NC_002109 Francisella tularensis plasmid pOM1, complete sequence 110-139 8 0.733
NC_004368_1 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952670-952699 30 LC494302 Escherichia phage SP27 DNA, complete genome 245480-245509 8 0.733
NC_004368_1 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952670-952699 30 MK817115 Escherichia phage vB_EcoM_phAPEC6, complete genome 230963-230992 8 0.733
NC_004368_1 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952670-952699 30 NC_027364 Escherichia phage PBECO 4, complete genome 39408-39437 8 0.733
NC_004368_1 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952670-952699 30 MH383160 Escherichia phage UB, complete genome 99995-100024 8 0.733
NC_004368_1 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952670-952699 30 MK327931 Escherichia phage vB_EcoM_G17, complete genome 256257-256286 8 0.733
NC_004368_1 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952670-952699 30 MN871445 UNVERIFIED: Serratia phage KpHz_2, complete genome 75797-75826 8 0.733
NC_004368_1 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952670-952699 30 MK448636 Streptococcus satellite phage Javan749, complete genome 10387-10416 8 0.733
NC_004368_1 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952670-952699 30 MN871444 UNVERIFIED: Serratia phage KpGz_1, complete genome 13324-13353 8 0.733
NC_004368_1 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952670-952699 30 MN693101 Marine virus AFVG_25M559, complete genome 25633-25662 8 0.733
NC_004368_1 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952670-952699 30 KT725776 Bacillus phage vB_BceS-MY192, partial genome 2349-2378 8 0.733
NC_004368_1 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952670-952699 30 LT603033 Escherichia phage vB_Eco_slurp01 genome assembly, chromosome: I 187103-187132 8 0.733
NC_004368_1 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952670-952699 30 KM507819 Escherichia phage 121Q, complete genome 246579-246608 8 0.733
NC_004368_1 1.13|952736|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952736-952765 30 NZ_CP050094 Rhizobium leguminosarum bv. trifolii strain 22B plasmid pRL22b4, complete sequence 273778-273807 8 0.733
NC_004368_1 1.13|952736|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952736-952765 30 NC_008379 Rhizobium leguminosarum bv. viciae 3841 plasmid pRL9, complete sequence 256698-256727 8 0.733
NC_004368_1 1.5|952208|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952208-952237 30 NZ_CP046044 Acinetobacter towneri strain 19110F47 plasmid p19110F47-2, complete sequence 79842-79871 9 0.7
NC_004368_1 1.5|952208|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952208-952237 30 NZ_CP048015 Acinetobacter towneri strain 205 plasmid pAT205, complete sequence 1512-1541 9 0.7
NC_004368_1 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT 952670-952699 30 HQ683709 Planktothrix phage PaV-LD, complete genome 72162-72191 9 0.7

1. spacer 1.3|952076|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to MK448749 (Streptococcus phage Javan39, complete genome) position: , mismatch: 0, identity: 1.0

atcacaccagtcgttatgatggatgactat	CRISPR spacer
atcacaccagtcgttatgatggatgactat	Protospacer
******************************

2. spacer 1.3|952076|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to MH853356 (Streptococcus phage LF2, partial genome) position: , mismatch: 0, identity: 1.0

atcacaccagtcgttatgatggatgactat	CRISPR spacer
atcacaccagtcgttatgatggatgactat	Protospacer
******************************

3. spacer 1.10|952538|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to MK448742 (Streptococcus phage Javan37, complete genome) position: , mismatch: 0, identity: 1.0

aaacatccgcaacgggataaataaagctag	CRISPR spacer
aaacatccgcaacgggataaataaagctag	Protospacer
******************************

4. spacer 1.5|952208|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to MK448742 (Streptococcus phage Javan37, complete genome) position: , mismatch: 1, identity: 0.967

tgaagttgatggatatgttgatttagagct	CRISPR spacer
tgaagttgatggatatgttgatttagaact	Protospacer
***************************.**

5. spacer 1.5|952208|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to MK448851 (Streptococcus phage Javan14, complete genome) position: , mismatch: 1, identity: 0.967

tgaagttgatggatatgttgatttagagct	CRISPR spacer
tgaagttgatggatatgttgatttagaact	Protospacer
***************************.**

6. spacer 1.10|952538|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to MK448956 (Streptococcus phage Javan48, complete genome) position: , mismatch: 1, identity: 0.967

aaacatccgcaacgggataaataaagctag	CRISPR spacer
aaacatccgcaacgggataaataaagttag	Protospacer
**************************.***

7. spacer 1.2|952010|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to MK448796 (Streptococcus phage Javan53, complete genome) position: , mismatch: 2, identity: 0.933

gctggagattttacaagcagtttgaatttc	CRISPR spacer
gctggagattttacaagcagtttaaattcc	Protospacer
***********************.****.*

8. spacer 1.2|952010|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to MK448971 (Streptococcus phage Javan52, complete genome) position: , mismatch: 2, identity: 0.933

gctggagattttacaagcagtttgaatttc	CRISPR spacer
gttggagattttataagcagtttgaatttc	Protospacer
*.***********.****************

9. spacer 1.2|952010|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to MK448829 (Streptococcus phage Javan7, complete genome) position: , mismatch: 2, identity: 0.933

gctggagattttacaagcagtttgaatttc	CRISPR spacer
gctggagattttacaagcagtttaaattcc	Protospacer
***********************.****.*

10. spacer 1.2|952010|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to MK448956 (Streptococcus phage Javan48, complete genome) position: , mismatch: 2, identity: 0.933

gctggagattttacaagcagtttgaatttc	CRISPR spacer
gttggagattttataagcagtttgaatttc	Protospacer
*.***********.****************

11. spacer 1.2|952010|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to MH853355 (Streptococcus phage LF1, complete genome) position: , mismatch: 2, identity: 0.933

gctggagattttacaagcagtttgaatttc	CRISPR spacer
gctggagattttacaagcagtttaaattcc	Protospacer
***********************.****.*

12. spacer 1.2|952010|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to MH853358 (Streptococcus phage LF4, complete genome) position: , mismatch: 2, identity: 0.933

gctggagattttacaagcagtttgaatttc	CRISPR spacer
gctggagattttacaagcagtttaaattcc	Protospacer
***********************.****.*

13. spacer 1.4|952142|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to JX409894 (Streptococcus phage LYGO9, complete genome) position: , mismatch: 2, identity: 0.933

tgtcaacagtacgtgagacgagtgtgtagg	CRISPR spacer
tgtcagcagtacgtgcgacgagtgtgtagg	Protospacer
*****.********* **************

14. spacer 1.4|952142|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to JX409895 (Streptococcus phage JX01, complete genome) position: , mismatch: 2, identity: 0.933

tgtcaacagtacgtgagacgagtgtgtagg	CRISPR spacer
tgtcagcagtacgtgcgacgagtgtgtagg	Protospacer
*****.********* **************

15. spacer 1.5|952208|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to MK448956 (Streptococcus phage Javan48, complete genome) position: , mismatch: 2, identity: 0.933

tgaagttgatggatatgttgatttagagct	CRISPR spacer
tgaagtcgatggatatgttgatttagaact	Protospacer
******.********************.**

16. spacer 1.9|952472|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to MK448924 (Streptococcus phage Javan384, complete genome) position: , mismatch: 2, identity: 0.933

aatcacttctgcataaatatcttttacttc	CRISPR spacer
gataacttctgcataaatatcttttacttc	Protospacer
.** **************************

17. spacer 1.10|952538|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to MK448796 (Streptococcus phage Javan53, complete genome) position: , mismatch: 2, identity: 0.933

aaacatccgcaacgggataaataaagctag	CRISPR spacer
gaacatccgcaacggaataaataaagctag	Protospacer
.**************.**************

18. spacer 1.2|952010|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to MK448837 (Streptococcus phage Javan10, complete genome) position: , mismatch: 3, identity: 0.9

gctggagattttacaagcagtttgaatttc	CRISPR spacer
gctggagattttataagcagtttaaattcc	Protospacer
*************.*********.****.*

19. spacer 1.2|952010|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to MK448742 (Streptococcus phage Javan37, complete genome) position: , mismatch: 3, identity: 0.9

gctggagattttacaagcagtttgaatttc	CRISPR spacer
gctggagattttataagcagtttaaattcc	Protospacer
*************.*********.****.*

20. spacer 1.2|952010|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to MK448851 (Streptococcus phage Javan14, complete genome) position: , mismatch: 3, identity: 0.9

gctggagattttacaagcagtttgaatttc	CRISPR spacer
gttggagattttataagcaatttgaatttc	Protospacer
*.***********.*****.**********

21. spacer 1.3|952076|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to MK448859 (Streptococcus phage Javan170, complete genome) position: , mismatch: 3, identity: 0.9

atcacaccagtcgttatgatggatgactat	CRISPR spacer
atcacaccagttattatgatggatgactac	Protospacer
***********..****************.

22. spacer 1.3|952076|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to MK448690 (Streptococcus phage Javan169, complete genome) position: , mismatch: 3, identity: 0.9

atcacaccagtcgttatgatggatgactat	CRISPR spacer
atcacaccagttattatgatggatgactac	Protospacer
***********..****************.

23. spacer 1.3|952076|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to MK448850 (Streptococcus phage Javan132, complete genome) position: , mismatch: 3, identity: 0.9

atcacaccagtcgttatgatggatgactat	CRISPR spacer
atcacaccagttattatgatggatgactac	Protospacer
***********..****************.

24. spacer 1.3|952076|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to MK448676 (Streptococcus phage Javan131, complete genome) position: , mismatch: 3, identity: 0.9

atcacaccagtcgttatgatggatgactat	CRISPR spacer
atcacaccagttattatgatggatgactac	Protospacer
***********..****************.

25. spacer 1.3|952076|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to MK448688 (Streptococcus phage Javan161, complete genome) position: , mismatch: 3, identity: 0.9

atcacaccagtcgttatgatggatgactat	CRISPR spacer
atcacaccagttattatgatggatgactac	Protospacer
***********..****************.

26. spacer 1.3|952076|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to MK448973 (Streptococcus phage Javan522, complete genome) position: , mismatch: 3, identity: 0.9

atcacaccagtcgttatgatggatgactat	CRISPR spacer
atcacaccagttgttatgatggatgatttt	Protospacer
***********.**************.* *

27. spacer 1.3|952076|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to MK448955 (Streptococcus phage Javan478, complete genome) position: , mismatch: 3, identity: 0.9

atcacaccagtcgttatgatggatgactat	CRISPR spacer
atcacaccagttgttatgatggatgatttt	Protospacer
***********.**************.* *

28. spacer 1.3|952076|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to MK448778 (Streptococcus phage Javan493, complete genome) position: , mismatch: 3, identity: 0.9

atcacaccagtcgttatgatggatgactat	CRISPR spacer
atcacaccagttgttatgatggatgatttt	Protospacer
***********.**************.* *

29. spacer 1.3|952076|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to MK448962 (Streptococcus phage Javan496, complete genome) position: , mismatch: 3, identity: 0.9

atcacaccagtcgttatgatggatgactat	CRISPR spacer
atcacaccagttgttatgatggatgatttt	Protospacer
***********.**************.* *

30. spacer 1.3|952076|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to MK448975 (Streptococcus phage Javan526, complete genome) position: , mismatch: 3, identity: 0.9

atcacaccagtcgttatgatggatgactat	CRISPR spacer
atcacaccagttgttatgatggatgatttt	Protospacer
***********.**************.* *

31. spacer 1.3|952076|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to MK448782 (Streptococcus phage Javan501, complete genome) position: , mismatch: 3, identity: 0.9

atcacaccagtcgttatgatggatgactat	CRISPR spacer
atcacaccagttgttatgatggatgatttt	Protospacer
***********.**************.* *

32. spacer 1.9|952472|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to AJ609634 (Bacteriophage EJ-1 proviral DNA, complete genome) position: , mismatch: 3, identity: 0.9

aatcacttctgcataaatatcttttacttc	CRISPR spacer
gataacttctgcataaatatctttcacttc	Protospacer
.** ********************.*****

33. spacer 1.9|952472|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to NC_005294 (Streptococcus prophage EJ-1, complete genome) position: , mismatch: 3, identity: 0.9

aatcacttctgcataaatatcttttacttc	CRISPR spacer
gataacttctgcataaatatctttcacttc	Protospacer
.** ********************.*****

34. spacer 1.2|952010|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to MK448749 (Streptococcus phage Javan39, complete genome) position: , mismatch: 4, identity: 0.867

gctggagattttacaagcagtttgaatttc	CRISPR spacer
gttggagattttataagcagtttaaattcc	Protospacer
*.***********.*********.****.*

35. spacer 1.2|952010|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to MH853356 (Streptococcus phage LF2, partial genome) position: , mismatch: 4, identity: 0.867

gctggagattttacaagcagtttgaatttc	CRISPR spacer
gttggagattttataagcagtttaaattcc	Protospacer
*.***********.*********.****.*

36. spacer 1.3|952076|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to JX409894 (Streptococcus phage LYGO9, complete genome) position: , mismatch: 4, identity: 0.867

atcacaccagtcgttatgatggatgactat	CRISPR spacer
atcacaccagttattatgatggatgatttt	Protospacer
***********..*************.* *

37. spacer 1.3|952076|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to MK448675 (Streptococcus phage Javan129, complete genome) position: , mismatch: 4, identity: 0.867

atcacaccagtcgttatgatggatgactat	CRISPR spacer
atcacaccagttattatgatggatgatttt	Protospacer
***********..*************.* *

38. spacer 1.3|952076|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to JX409895 (Streptococcus phage JX01, complete genome) position: , mismatch: 4, identity: 0.867

atcacaccagtcgttatgatggatgactat	CRISPR spacer
atcacaccagttattatgatggatgatttt	Protospacer
***********..*************.* *

39. spacer 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to KC465899 (Pelagibacter phage HTVC008M, complete genome) position: , mismatch: 4, identity: 0.867

-gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
tgaatat-aaagattttaaaaaagtagattt	Protospacer
 ***.** **************** * ****

40. spacer 1.5|952208|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to AP014287 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S24-C25, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 6, identity: 0.8

tgaagttgatggatatgttgatttagagct	CRISPR spacer
caaagttgatggagatgttgatttcaaggt	Protospacer
..*********** ********** .** *

41. spacer 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP035396 (Bacillus subtilis strain SRCM103697 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.8

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
acacatgaatgattttaaaaaagaacttgg	Protospacer
. ******* **************** *  

42. spacer 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032856 (Bacillus subtilis subsp. subtilis strain PJ-7 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.8

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
acacatgaatgattttaaaaaagaacttgg	Protospacer
. ******* **************** *  

43. spacer 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MG557999 (Escherichia coli strain Eco-36682cz plasmid pEco-36682cz, complete sequence) position: , mismatch: 6, identity: 0.8

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
gggggtgaaagattttaaaaaagaaccttc	Protospacer
*.. .********************* **.

44. spacer 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MF497781 (Citrobacter freundii strain Cfr-36049cz plasmid pCrf-36049cz, complete sequence) position: , mismatch: 6, identity: 0.8

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
gggggtgaaagattttaaaaaagaaccttc	Protospacer
*.. .********************* **.

45. spacer 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to MT074138 (Bacteroides phage DAC17, complete genome) position: , mismatch: 6, identity: 0.8

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
aacaatgcaagactttaaaaaagaacatat	Protospacer
.*  *** ****.*************** *

46. spacer 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to MT074136 (Bacteroides phage DAC15, complete genome) position: , mismatch: 6, identity: 0.8

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
aacaatgcaagactttaaaaaagaacatat	Protospacer
.*  *** ****.*************** *

47. spacer 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046030 (Staphylococcus chromogenes strain 1401 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.8

gaacatgaaagattttaaaaaagaacattt---	CRISPR spacer
caccatgaaagattttagaaaag---atttagc	Protospacer
 * **************.*****   ****   

48. spacer 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to AP014166 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C61-MedDCM-OCT-S46-C82, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 6, identity: 0.8

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
taaagttaaagattctaaaaaagaagattt	Protospacer
 ** .* *******.********** ****

49. spacer 1.1|951944|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to NC_004534 (Corynebacterium glutamicum plasmid pCG2, complete sequence) position: , mismatch: 7, identity: 0.767

aaaaactcttaccacttacatacatgtatg	CRISPR spacer
ctggtgttttaccacttacatacatgtatg	Protospacer
  ..  *.**********************

50. spacer 1.5|952208|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to NC_012530 (Lactobacillus phage Lb338-1, complete genome) position: , mismatch: 7, identity: 0.767

tgaagttgatggatatgttgatttagagct	CRISPR spacer
tcaggttgatggatatgttgttttaggaac	Protospacer
* *.**************** *****.. .

51. spacer 1.7|952340|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP028120 (Escherichia coli O43 str. RM10042 plasmid pRM10042-1, complete sequence) position: , mismatch: 7, identity: 0.767

tttaaagagatatctgtttcatcttgcgga	CRISPR spacer
cgggcagagatatctgtatcatattgcgga	Protospacer
.  . ************ **** *******

52. spacer 1.7|952340|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033633 (Escherichia coli isolate ECCNB12-2 plasmid pTB-nb2, complete sequence) position: , mismatch: 7, identity: 0.767

tttaaagagatatctgtttcatcttgcgga	CRISPR spacer
cgggcagagatatctgtatcatattgcgga	Protospacer
.  . ************ **** *******

53. spacer 1.8|952406|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP028120 (Escherichia coli O43 str. RM10042 plasmid pRM10042-1, complete sequence) position: , mismatch: 7, identity: 0.767

tttaaagagatatctgtttcatcttgcgga	CRISPR spacer
cgggcagagatatctgtatcatattgcgga	Protospacer
.  . ************ **** *******

54. spacer 1.8|952406|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033633 (Escherichia coli isolate ECCNB12-2 plasmid pTB-nb2, complete sequence) position: , mismatch: 7, identity: 0.767

tttaaagagatatctgtttcatcttgcgga	CRISPR spacer
cgggcagagatatctgtatcatattgcgga	Protospacer
.  . ************ **** *******

55. spacer 1.9|952472|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044019 (Acinetobacter indicus strain HY20 plasmid pAI01, complete sequence) position: , mismatch: 7, identity: 0.767

aatcacttctgcataaatatcttttacttc	CRISPR spacer
agctacttgtgcataaatatcatttacctg	Protospacer
*...**** ************ *****.* 

56. spacer 1.9|952472|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to MN855940 (Myoviridae sp. isolate 64, complete genome) position: , mismatch: 7, identity: 0.767

aatcacttctgcataaatatcttttacttc	CRISPR spacer
agcccactctccataaatctcttttacttc	Protospacer
*..*  .*** ******* ***********

57. spacer 1.9|952472|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to CAJCJZ010000002 (Enterococcus phage vB_EfaS_140 genome assembly, contig: phage140-genome, whole genome shotgun sequence) position: , mismatch: 7, identity: 0.767

aatcacttctgcataaatatcttttacttc	CRISPR spacer
gactaattgtgcataaatatcttttagttt	Protospacer
.*..* ** ***************** **.

58. spacer 1.9|952472|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to MT119360 (Enterococcus phage nattely, complete genome) position: , mismatch: 7, identity: 0.767

aatcacttctgcataaatatcttttacttc	CRISPR spacer
tactaattgtgcataaatatcttttagttt	Protospacer
 *..* ** ***************** **.

59. spacer 1.11|952604|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to MT778840 (Rhizobium phage P11VFA, complete genome) position: , mismatch: 7, identity: 0.767

agtttcttgtgggttagcttgtccaccgta	CRISPR spacer
tcgttcttgtgggtgagcttgtccacgttg	Protospacer
   *********** ***********  *.

60. spacer 1.11|952604|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to KF614509 (Rhizobium phage vB_RleS_L338C, complete genome) position: , mismatch: 7, identity: 0.767

agtttcttgtgggttagcttgtccaccgta	CRISPR spacer
tcgttcttgtgggtgagcttgtccacgttg	Protospacer
   *********** ***********  *.

61. spacer 1.11|952604|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to MF417890 (Uncultured Caudovirales phage clone 7F_15, partial genome) position: , mismatch: 7, identity: 0.767

agtttcttgtgggttagcttgtccaccgta	CRISPR spacer
tgcttgttgtggcttagcttgtccactttg	Protospacer
 *.** ****** *************. *.

62. spacer 1.11|952604|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to MF417953 (Uncultured Caudovirales phage clone 7S_15, partial genome) position: , mismatch: 7, identity: 0.767

agtttcttgtgggttagcttgtccaccgta	CRISPR spacer
tgcttgttgtggcttagcttgtccactttg	Protospacer
 *.** ****** *************. *.

63. spacer 1.11|952604|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to GU557055 (Puniceispirillum phage HMO-2011, complete genome) position: , mismatch: 7, identity: 0.767

agtttcttgtgggttagcttgtccaccgta	CRISPR spacer
tcttaccaatgggttagattgtccaccgta	Protospacer
  ** *. .******** ************

64. spacer 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KR091915 (Klebsiella pneumoniae strain KPC-DK05 plasmid pKPC-DK05, complete sequence) position: , mismatch: 7, identity: 0.767

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
gggggtgaaagatttcaaaaaagaaccttc	Protospacer
*.. .**********.********** **.

65. spacer 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025915 (Escherichia coli strain 203740 plasmid p203740_35, complete sequence) position: , mismatch: 7, identity: 0.767

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
gggggtgaaagatttcaaaaaagaaccttc	Protospacer
*.. .**********.********** **.

66. spacer 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LS999564 (Escherichia coli isolate EC-TO143 plasmid 5, complete sequence) position: , mismatch: 7, identity: 0.767

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
gggggtgaaagatttcaaaaaagaaccttc	Protospacer
*.. .**********.********** **.

67. spacer 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LN824136 (Klebsiella pneumoniae genome assembly MS6671.v1, plasmid : _Plasmid_C_Kpneumoniae_MS6671) position: , mismatch: 7, identity: 0.767

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
gggggtgaaagatttcaaaaaagaaccttc	Protospacer
*.. .**********.********** **.

68. spacer 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054370 (Escherichia coli strain SCU-115 plasmid pSCU-115-2, complete sequence) position: , mismatch: 7, identity: 0.767

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
gggggtgaaagatttcaaaaaagaaccttc	Protospacer
*.. .**********.********** **.

69. spacer 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP006640 (Escherichia coli PCN061 plasmid PCN061p4, complete sequence) position: , mismatch: 7, identity: 0.767

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
gggggtgaaagatttcaaaaaagaaccttc	Protospacer
*.. .**********.********** **.

70. spacer 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029801 (Salmonella enterica subsp. enterica serovar Anatum strain R16.0676 plasmid pR16.0676_34k, complete sequence) position: , mismatch: 7, identity: 0.767

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
gggggtgaaagatttcaaaaaagaaccttc	Protospacer
*.. .**********.********** **.

71. spacer 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015505 (Klebsiella pneumoniae strain SKGH01 plasmid unnamed 5, complete sequence) position: , mismatch: 7, identity: 0.767

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
gggggtgaaagatttcaaaaaagaaccttc	Protospacer
*.. .**********.********** **.

72. spacer 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026060 (Proteus mirabilis strain FDAARGOS_80 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
gggggtgaaagatttcaaaaaagaaccttc	Protospacer
*.. .**********.********** **.

73. spacer 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024853 (Escherichia coli strain AR_0006 plasmid tig00000176, complete sequence) position: , mismatch: 7, identity: 0.767

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
gggggtgaaagatttcaaaaaagaaccttc	Protospacer
*.. .**********.********** **.

74. spacer 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LT985287 (Escherichia coli strain RPC3 plasmid RCS69_pI, complete sequence) position: , mismatch: 7, identity: 0.767

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
gggggtgaaagatttcaaaaaagaaccttc	Protospacer
*.. .**********.********** **.

75. spacer 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP028999 (Klebsiella pneumoniae strain AR_0079 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.767

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
gggggtgaaagatttcaaaaaagaaccttc	Protospacer
*.. .**********.********** **.

76. spacer 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027258 (Escherichia coli strain EC11 plasmid unnamed3, complete sequence) position: , mismatch: 7, identity: 0.767

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
gggggtgaaagatttcaaaaaagaaccttc	Protospacer
*.. .**********.********** **.

77. spacer 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019200 (Salmonella enterica subsp. enterica serovar Muenster str. 0315 plasmid pCFSAN001297_01, complete sequence) position: , mismatch: 7, identity: 0.767

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
gggggtgaaagatttcaaaaaagaaccttc	Protospacer
*.. .**********.********** **.

78. spacer 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023823 (Escherichia coli strain 7/2 plasmid p7_2.3, complete sequence) position: , mismatch: 7, identity: 0.767

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
gggggtgaaagatttcaaaaaagaaccttc	Protospacer
*.. .**********.********** **.

79. spacer 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026025 (Klebsiella pneumoniae strain 11420 plasmid p11420-KPC, complete sequence) position: , mismatch: 7, identity: 0.767

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
gggggtgaaagatttcaaaaaagaaccttc	Protospacer
*.. .**********.********** **.

80. spacer 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018988 (Escherichia coli strain Ecol_AZ146 plasmid pECAZ146_3, complete sequence) position: , mismatch: 7, identity: 0.767

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
gggggtgaaagatttcaaaaaagaaccttc	Protospacer
*.. .**********.********** **.

81. spacer 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MK033500 (Salmonella enterica subsp. enterica serovar Anatum strain R13.0957_pConj58k plasmid pConj58k, complete sequence) position: , mismatch: 7, identity: 0.767

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
gggggtgaaagatttcaaaaaagaaccttc	Protospacer
*.. .**********.********** **.

82. spacer 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MK033501 (Salmonella enterica subsp. enterica serovar Anatum strain R13.0957_pConj83k plasmid pConj83k, complete sequence) position: , mismatch: 7, identity: 0.767

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
gggggtgaaagatttcaaaaaagaaccttc	Protospacer
*.. .**********.********** **.

83. spacer 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MK033499 (Escherichia coli strain C600_pConj125k plasmid pConj125k, complete sequence) position: , mismatch: 7, identity: 0.767

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
gggggtgaaagatttcaaaaaagaaccttc	Protospacer
*.. .**********.********** **.

84. spacer 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to MN693256 (Marine virus AFVG_25M339, complete genome) position: , mismatch: 7, identity: 0.767

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
cagcatgaaagatttaaaaaaagaagaaga	Protospacer
 *.************ ********* *   

85. spacer 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR215001 (Mycoplasma conjunctivae strain NCTC10147 plasmid 5) position: , mismatch: 7, identity: 0.767

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
ggaagataaaaattttaaaaaagagcattt	Protospacer
*.* .  ***.*************.*****

86. spacer 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to MN855807 (Siphoviridae sp. isolate 122, partial genome) position: , mismatch: 7, identity: 0.767

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
caccatgaaagatattaaaaaagattacta	Protospacer
 * ********** ********** .*.* 

87. spacer 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to FJ429185 (Lactococcus phage P087, complete genome) position: , mismatch: 7, identity: 0.767

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
caccatgaaagatattaaaaaagattacta	Protospacer
 * ********** ********** .*.* 

88. spacer 1.5|952208|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to MN871480 (UNVERIFIED: Pseudomonas phage PaSz-1_45_270k, complete genome) position: , mismatch: 8, identity: 0.733

tgaagttgatggatatgttgatttagagct	CRISPR spacer
tgaagttgatggatatggtggttcttataa	Protospacer
***************** **.**.  *   

89. spacer 1.5|952208|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to MT001829 (Salmonella phage SE_PL, complete genome) position: , mismatch: 8, identity: 0.733

tgaagttgatggatatgttgatttagagct	CRISPR spacer
aaaagttgatagatatgatgatttacattc	Protospacer
 .********.****** ******* * ..

90. spacer 1.5|952208|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to DI373487 (KR 1020130142837-A/1: Bacteriophage of Pseudomonas aeruginosa and uses thereof) position: , mismatch: 8, identity: 0.733

tgaagttgatggatatgttgatttagagct	CRISPR spacer
tgaagttgatggatatggtggttcttataa	Protospacer
***************** **.**.  *   

91. spacer 1.5|952208|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to MK773491 (Salmonella phage 7t3, complete genome) position: , mismatch: 8, identity: 0.733

tgaagttgatggatatgttgatttagagct	CRISPR spacer
aaaagttgatagatatgatgatttacattc	Protospacer
 .********.****** ******* * ..

92. spacer 1.5|952208|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to MN871489 (UNVERIFIED: Pseudomonas phage PaZh_1, complete genome) position: , mismatch: 8, identity: 0.733

tgaagttgatggatatgttgatttagagct	CRISPR spacer
tgaagttgatggatatggtggttcttataa	Protospacer
***************** **.**.  *   

93. spacer 1.5|952208|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to NC_042081 (Pseudomonas phage SL2, complete genome) position: , mismatch: 8, identity: 0.733

tgaagttgatggatatgttgatttagagct	CRISPR spacer
tgaagttgatggatatggtggttcttataa	Protospacer
***************** **.**.  *   

94. spacer 1.5|952208|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to MK268344 (Salmonella phage Munch, complete genome) position: , mismatch: 8, identity: 0.733

tgaagttgatggatatgttgatttagagct	CRISPR spacer
aaaagttgatagatatgatgatttacattc	Protospacer
 .********.****** ******* * ..

95. spacer 1.5|952208|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to NC_042060 (Pseudomonas phage PA7, partial genome) position: , mismatch: 8, identity: 0.733

tgaagttgatggatatgttgatttagagct	CRISPR spacer
tgaagttgatggatatggtggttcttataa	Protospacer
***************** **.**.  *   

96. spacer 1.5|952208|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to NC_004629 (Pseudomonas phage phiKZ, complete genome) position: , mismatch: 8, identity: 0.733

tgaagttgatggatatgttgatttagagct	CRISPR spacer
tgaagttgatggatatggtggttcttataa	Protospacer
***************** **.**.  *   

97. spacer 1.7|952340|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to NC_014502 (Gloeothece verrucosa PCC 7822 plasmid Cy782203, complete sequence) position: , mismatch: 8, identity: 0.733

tttaaagagatatctgtttcatcttgcgga	CRISPR spacer
tttaaaaagatatcggtttcatcgagaaac	Protospacer
******.******* ********  * .. 

98. spacer 1.8|952406|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to NC_014502 (Gloeothece verrucosa PCC 7822 plasmid Cy782203, complete sequence) position: , mismatch: 8, identity: 0.733

tttaaagagatatctgtttcatcttgcgga	CRISPR spacer
tttaaaaagatatcggtttcatcgagaaac	Protospacer
******.******* ********  * .. 

99. spacer 1.9|952472|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to MK448665 (Streptococcus phage Javan1, complete genome) position: , mismatch: 8, identity: 0.733

aatcacttctgcataaatatcttttacttc	CRISPR spacer
tgcaggttctgcaaaaataacttttacttc	Protospacer
 .. . ******* ***** **********

100. spacer 1.9|952472|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053834 (Arcobacter cloacae strain LMG 26153 plasmid pACLO, complete sequence) position: , mismatch: 8, identity: 0.733

aatcacttctgcataaatatcttttacttc	CRISPR spacer
tttaacttctgcatcaatatcttttgtata	Protospacer
  * ********** **********.. * 

101. spacer 1.11|952604|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to NC_008201 (Mannheimia phage phiMHaA1, complete genome) position: , mismatch: 8, identity: 0.733

agtttcttgtgggttagcttgtccaccgta	CRISPR spacer
gggccatcgtgggttagctcgtccaccgtg	Protospacer
.* .. *.***********.*********.

102. spacer 1.11|952604|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to DQ426905 (Bacteriophage phi-MhaA1-BAA410, complete genome) position: , mismatch: 8, identity: 0.733

agtttcttgtgggttagcttgtccaccgta	CRISPR spacer
gggccatcgtgggttagctcgtccaccgtg	Protospacer
.* .. *.***********.*********.

103. spacer 1.11|952604|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to KP137432 (Mannheimia phage vB_MhM_535AP1, complete genome) position: , mismatch: 8, identity: 0.733

agtttcttgtgggttagcttgtccaccgta	CRISPR spacer
gggccatcgtgggttagctcgtccaccgtg	Protospacer
.* .. *.***********.*********.

104. spacer 1.11|952604|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to JN255163 (Mannheimia phage vB_MhM_1152AP, complete genome) position: , mismatch: 8, identity: 0.733

agtttcttgtgggttagcttgtccaccgta	CRISPR spacer
gggccatcgtgggttagctcgtccaccgtg	Protospacer
.* .. *.***********.*********.

105. spacer 1.11|952604|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to KP137438 (Mannheimia phage vB_MhM_2256AP1, complete genome) position: , mismatch: 8, identity: 0.733

agtttcttgtgggttagcttgtccaccgta	CRISPR spacer
gggccatcgtgggttagctcgtccaccgtg	Protospacer
.* .. *.***********.*********.

106. spacer 1.11|952604|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to DQ426904 (Bacteriophage phi-MhaA1-PHL101, complete genome) position: , mismatch: 8, identity: 0.733

agtttcttgtgggttagcttgtccaccgta	CRISPR spacer
gggccatcgtgggttagctcgtccaccgtg	Protospacer
.* .. *.***********.*********.

107. spacer 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039286 (Leptospira interrogans strain FMAS_AW1 plasmid pLiSL3, complete sequence) position: , mismatch: 8, identity: 0.733

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
tatactagtagaatttaaaaaagaacattt	Protospacer
 *   *.. *** *****************

108. spacer 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012103 (Bacillus thuringiensis strain HS18-1 plasmid pHS18-4, complete sequence) position: , mismatch: 8, identity: 0.733

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
aaacatcaaagattttaaaaaatgaggtcg	Protospacer
.***** *************** .* .*. 

109. spacer 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR214953 (Mycoplasma neurolyticum strain NCTC10166 plasmid 3) position: , mismatch: 8, identity: 0.733

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
aattgataaaaattttaaaaaacaacattt	Protospacer
.* ..  ***.*********** *******

110. spacer 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009352 (Francisella tularensis subsp. novicida F6168 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.733

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
ttgcatgaacgattttaaaaaagagaatag	Protospacer
  .****** **************. **  

111. spacer 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP051681 (Cohnella sp. MFER-1 plasmid unnamed1) position: , mismatch: 8, identity: 0.733

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
tcacatgaacgattttgaaaaagaaacggt	Protospacer
  ******* ******.********    *

112. spacer 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to NC_004952 (Francisella novicida plasmid pFNL10, complete sequence) position: , mismatch: 8, identity: 0.733

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
ttgcatgaacgattttaaaaaagagaatag	Protospacer
  .****** **************. **  

113. spacer 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to NC_002109 (Francisella tularensis plasmid pOM1, complete sequence) position: , mismatch: 8, identity: 0.733

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
ttgcatgaacgattttaaaaaagagaatag	Protospacer
  .****** **************. **  

114. spacer 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to LC494302 (Escherichia phage SP27 DNA, complete genome) position: , mismatch: 8, identity: 0.733

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
tcatatgaaagctttgaaaaaagaacagaa	Protospacer
  *.******* *** ***********   

115. spacer 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to MK817115 (Escherichia phage vB_EcoM_phAPEC6, complete genome) position: , mismatch: 8, identity: 0.733

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
tcatatgaaagctttgaaaaaagaacagaa	Protospacer
  *.******* *** ***********   

116. spacer 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to NC_027364 (Escherichia phage PBECO 4, complete genome) position: , mismatch: 8, identity: 0.733

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
tcatatgaaagctttgaaaaaagaacagaa	Protospacer
  *.******* *** ***********   

117. spacer 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to MH383160 (Escherichia phage UB, complete genome) position: , mismatch: 8, identity: 0.733

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
tcatatgaaagctttgaaaaaagaacagaa	Protospacer
  *.******* *** ***********   

118. spacer 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to MK327931 (Escherichia phage vB_EcoM_G17, complete genome) position: , mismatch: 8, identity: 0.733

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
tcatatgaaagctttgaaaaaagaacagaa	Protospacer
  *.******* *** ***********   

119. spacer 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to MN871445 (UNVERIFIED: Serratia phage KpHz_2, complete genome) position: , mismatch: 8, identity: 0.733

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
attcctcttagatttaaaaaaagaacattt	Protospacer
.  * *   ****** **************

120. spacer 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to MK448636 (Streptococcus satellite phage Javan749, complete genome) position: , mismatch: 8, identity: 0.733

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
gtttataaaagattttaaaaaagaaatcta	Protospacer
*  .**.******************  .* 

121. spacer 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to MN871444 (UNVERIFIED: Serratia phage KpGz_1, complete genome) position: , mismatch: 8, identity: 0.733

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
attcctcttagatttaaaaaaagaacattt	Protospacer
.  * *   ****** **************

122. spacer 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to MN693101 (Marine virus AFVG_25M559, complete genome) position: , mismatch: 8, identity: 0.733

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
aagagtagaagaatttaaaaaagaacattg	Protospacer
.*. .*..**** **************** 

123. spacer 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to KT725776 (Bacillus phage vB_BceS-MY192, partial genome) position: , mismatch: 8, identity: 0.733

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
gtggatgattgattttaaaaaagaacaagg	Protospacer
* . ****  *****************   

124. spacer 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to LT603033 (Escherichia phage vB_Eco_slurp01 genome assembly, chromosome: I) position: , mismatch: 8, identity: 0.733

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
tcatatgaaagctttgaaaaaagaacagaa	Protospacer
  *.******* *** ***********   

125. spacer 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to KM507819 (Escherichia phage 121Q, complete genome) position: , mismatch: 8, identity: 0.733

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
tcatatgaaagctttgaaaaaagaacagaa	Protospacer
  *.******* *** ***********   

126. spacer 1.13|952736|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050094 (Rhizobium leguminosarum bv. trifolii strain 22B plasmid pRL22b4, complete sequence) position: , mismatch: 8, identity: 0.733

agaggggaaaatatcaatgccgaatgctga	CRISPR spacer
agctatgaaaatatcaatgccgaaggcgcg	Protospacer
**  . ****************** **  .

127. spacer 1.13|952736|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to NC_008379 (Rhizobium leguminosarum bv. viciae 3841 plasmid pRL9, complete sequence) position: , mismatch: 8, identity: 0.733

agaggggaaaatatcaatgccgaatgctga	CRISPR spacer
agctatgaaaatatcaatgccgaaggcgcg	Protospacer
**  . ****************** **  .

128. spacer 1.5|952208|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046044 (Acinetobacter towneri strain 19110F47 plasmid p19110F47-2, complete sequence) position: , mismatch: 9, identity: 0.7

tgaagttgatggatatgttgatttagagct	CRISPR spacer
agaagctcatggatatgttgatttcagcaa	Protospacer
 ****.* **************** ..   

129. spacer 1.5|952208|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP048015 (Acinetobacter towneri strain 205 plasmid pAT205, complete sequence) position: , mismatch: 9, identity: 0.7

tgaagttgatggatatgttgatttagagct	CRISPR spacer
agaagctcatggatatgttgatttcagcaa	Protospacer
 ****.* **************** ..   

130. spacer 1.12|952670|30|NC_004368|PILER-CR,CRISPRCasFinder,CRT matches to HQ683709 (Planktothrix phage PaV-LD, complete genome) position: , mismatch: 9, identity: 0.7

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
ccacatgacagattttaacaaagaattggc	Protospacer
  ****** ********* ******.   .

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 36655 : 48720 8 Synechococcus_phage(28.57%) NA NA
DBSCAN-SWA_2 610215 : 617769 11 Streptococcus_phage(50.0%) transposase,integrase attL 603560:603575|attR 621049:621064
DBSCAN-SWA_3 1680451 : 1691184 14 Streptococcus_phage(84.62%) NA NA
DBSCAN-SWA_4 2180929 : 2188133 8 uncultured_Caudovirales_phage(16.67%) NA NA
Click the colored protein region to show detailed information
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
NC_004368.1|WP_000384271.1|235555_235882_+|replication-initiator-protein-A 235555_235882_+ 108 aa aa AcrIIA21 NA NA No NA