CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_ALTI01000025	Streptococcus agalactiae GB00279 ctg7180000004347, whole genome shotgun sequence	0 crisprs	NA	0	0	1	0
NZ_ALTI01000004	Streptococcus agalactiae GB00279 ctg7180000004326, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALTI01000014	Streptococcus agalactiae GB00279 ctg7180000004336, whole genome shotgun sequence	0 crisprs	NA	0	0	1	1
NZ_ALTI01000019	Streptococcus agalactiae GB00279 ctg7180000004341, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALTI01000015	Streptococcus agalactiae GB00279 ctg7180000004337, whole genome shotgun sequence	0 crisprs	cas3	0	0	2	0
NZ_ALTI01000024	Streptococcus agalactiae GB00279 ctg7180000004346, whole genome shotgun sequence	0 crisprs	csa3	0	0	2	0
NZ_ALTI01000018	Streptococcus agalactiae GB00279 ctg7180000004340, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALTI01000007	Streptococcus agalactiae GB00279 ctg7180000004329, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALTI01000020	Streptococcus agalactiae GB00279 ctg7180000004342, whole genome shotgun sequence	0 crisprs	DinG	0	0	1	0
NZ_ALTI01000017	Streptococcus agalactiae GB00279 ctg7180000004339, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALTI01000011	Streptococcus agalactiae GB00279 ctg7180000004333, whole genome shotgun sequence	0 crisprs	NA	0	0	0	1
NZ_ALTI01000002	Streptococcus agalactiae GB00279 ctg7180000004324, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALTI01000022	Streptococcus agalactiae GB00279 ctg7180000004344, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALTI01000005	Streptococcus agalactiae GB00279 ctg7180000004327, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALTI01000012	Streptococcus agalactiae GB00279 ctg7180000004334, whole genome shotgun sequence	0 crisprs	csm6	0	0	0	0
NZ_ALTI01000013	Streptococcus agalactiae GB00279 ctg7180000004335, whole genome shotgun sequence	0 crisprs	NA	0	0	2	0
NZ_ALTI01000016	Streptococcus agalactiae GB00279 ctg7180000004338, whole genome shotgun sequence	0 crisprs	cas3	0	0	0	0
NZ_ALTI01000010	Streptococcus agalactiae GB00279 ctg7180000004332, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALTI01000008	Streptococcus agalactiae GB00279 ctg7180000004330, whole genome shotgun sequence	0 crisprs	NA	0	0	1	0
NZ_ALTI01000003	Streptococcus agalactiae GB00279 ctg7180000004325, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALTI01000026	Streptococcus agalactiae GB00279 ctg7180000004348, whole genome shotgun sequence	1 crisprs	csn2,cas2,cas1,cas9	2	9	1	0
NZ_ALTI01000027	Streptococcus agalactiae GB00279 ctg7180000004349, whole genome shotgun sequence	0 crisprs	NA	0	0	1	0
NZ_ALTI01000023	Streptococcus agalactiae GB00279 ctg7180000004345, whole genome shotgun sequence	0 crisprs	DEDDh	0	0	0	0
NZ_ALTI01000006	Streptococcus agalactiae GB00279 ctg7180000004328, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALTI01000001	Streptococcus agalactiae GB00279 ctg7180000004323, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALTI01000021	Streptococcus agalactiae GB00279 ctg7180000004343, whole genome shotgun sequence	0 crisprs	RT	0	0	0	0
NZ_ALTI01000009	Streptococcus agalactiae GB00279 ctg7180000004331, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

37752 : 45306

Streptococcus_phage(50.0%)

integrase,transposase

attL 30581:30594|attR 41865:41878

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
30581:30594	attL	NA	NA	NA	NA
WP_000595708.1\|37752_38949_+	voltage-gated chloride channel family protein	A0A1X9I5Z9	Streptococcus_phage	4.6e-103	54.5
WP_001068667.1\|39528_39876_+	50S ribosomal protein L19	NA	NA	NA	NA
WP_079260937.1\|40020_40635_-\|integrase	site-specific integrase	F8HGP4	Streptococcus_phage	3.5e-54	60.2
WP_001872365.1\|40637_40904_-	hypothetical protein	Q77YW7	Streptococcus_phage	9.2e-20	65.2
WP_000640620.1\|40903_41308_+	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	1.3e-20	43.6
WP_001122304.1\|41469_41670_+\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_001872364.1\|41694_41952_+\|transposase	IS3 family transposase	A0A0C5AEA5	Paenibacillus_phage	5.8e-11	43.5
41865:41878	attR	NA	NA	NA	NA
WP_001867107.1\|42077_42287_+\|transposase	transposase	NA	NA	NA	NA
WP_000508795.1\|42459_42621_-	NINE protein	NA	NA	NA	NA
WP_000594360.1\|43362_44640_+	ABC transporter permease	NA	NA	NA	NA
WP_000353149.1\|44649_45306_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.2e-22	31.8

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_ALTI01000025

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

70731 : 128100

Streptococcus_phage(76.09%)

holin,head,capsid,portal,protease,terminase,tail,integrase,tRNA

attL 63961:63976|attR 94417:94432

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
63961:63976	attL	NA	NA	NA	NA
WP_000768163.1\|70731_73524_+\|tRNA	isoleucine--tRNA ligase	A0A2H4UVG0	Bodo_saltans_virus	3.0e-68	26.1
WP_001237035.1\|73640_73943_-	DUF1827 family protein	NA	NA	NA	NA
WP_000184292.1\|74006_74462_-	NUDIX hydrolase	NA	NA	NA	NA
WP_000882549.1\|74647_76909_-\|protease	ATP-dependent Clp protease ATP-binding subunit	A0A2C9CYX3	Yersinia_phage	7.4e-126	39.4
WP_000443582.1\|77206_77437_+	DUF1797 family protein	NA	NA	NA	NA
WP_001011647.1\|77579_78272_+	amino acid ABC transporter permease	NA	NA	NA	NA
WP_000230134.1\|78264_78999_+	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.1e-35	41.8
WP_001106845.1\|79285_80980_+	phospho-sugar mutase	A0A1X9I671	Streptococcus_phage	5.5e-126	42.6
WP_000137498.1\|81118_81973_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase	A0A249XZQ2	Enterococcus_phage	1.5e-39	40.2
WP_000634985.1\|81969_82806_+	NAD(P)H-hydrate dehydratase	NA	NA	NA	NA
WP_001286939.1\|82931_84272_+	exodeoxyribonuclease VII large subunit	A0A1V0SIT1	Klosneuvirus	1.0e-37	26.9
WP_001280900.1\|84249_84465_+	exodeoxyribonuclease VII small subunit	NA	NA	NA	NA
WP_000256279.1\|84464_85337_+	polyprenyl synthetase family protein	NA	NA	NA	NA
WP_001041040.1\|85329_86157_+	TlyA family rRNA (cytidine-2'-O)-methyltransferase	NA	NA	NA	NA
WP_000747940.1\|86143_86617_+	ArgR family transcriptional regulator	NA	NA	NA	NA
WP_000923619.1\|86628_88287_+	DNA repair protein RecN	NA	NA	NA	NA
WP_000034838.1\|88399_89236_+	DegV family protein	A0A0N9SI50	Staphylococcus_phage	3.7e-14	38.0
WP_001035227.1\|89228_90068_+	SGNH/GDSL hydrolase family protein	NA	NA	NA	NA
WP_000806954.1\|90042_90645_+	YpmS family protein	NA	NA	NA	NA
WP_001284634.1\|90747_91023_+	HU family DNA-binding protein	A7KV42	Bacillus_phage	1.2e-25	71.9
WP_000269471.1\|91111_92254_-\|integrase	site-specific integrase	A1EAB7	Streptococcus_phage	2.3e-184	83.2
WP_000790387.1\|92373_93231_-	DNA adenine methylase	A0A2H4UUI2	Bodo_saltans_virus	2.0e-15	29.3
WP_001008091.1\|93287_95009_-	AAA family ATPase	NA	NA	NA	NA
94417:94432	attR	NA	NA	NA	NA
WP_000151180.1\|95133_95520_-	ImmA/IrrE family metallo-endopeptidase	Q7Y4M1	Streptococcus_phage	4.9e-38	58.4
WP_000495435.1\|95523_95871_-	helix-turn-helix transcriptional regulator	A0A126GGQ7	Streptococcus_phage	1.2e-40	71.8
WP_001112861.1\|96160_96352_+	hypothetical protein	A0A141DZR9	Streptococcus_phage	1.4e-17	69.8
WP_001002365.1\|96385_97156_+	phage antirepressor	A0A1Q1PVU2	Staphylococcus_phage	2.2e-77	57.9
WP_001123478.1\|97233_97545_+	hypothetical protein	M1Q0Y6	Streptococcus_phage	2.6e-50	86.3
WP_000734883.1\|97549_97696_+	hypothetical protein	NA	NA	NA	NA
WP_001108354.1\|98385_98589_+	hypothetical protein	A7J276	Streptococcus_phage	2.4e-28	89.6
WP_000573833.1\|98678_98978_+	hypothetical protein	A7J277	Streptococcus_phage	2.3e-43	99.0
WP_001143850.1\|98977_100135_+	DUF2800 domain-containing protein	A7J278	Streptococcus_phage	5.0e-219	99.2
WP_000214059.1\|100148_100712_+	DUF2815 family protein	D2J040	Enterococcus_phage	7.4e-51	57.9
WP_001216250.1\|100754_102677_+	DNA polymerase	A7J280	Streptococcus_phage	0.0e+00	98.3
WP_000806921.1\|102681_105066_+	hypothetical protein	A7J282	Streptococcus_phage	3.1e-276	94.4
WP_001258484.1\|105452_105728_+	VRR-NUC domain-containing protein	A7J283	Streptococcus_phage	1.4e-42	91.2
WP_001236567.1\|105724_107047_+	DEAD/DEAH box helicase family protein	A7J284	Streptococcus_phage	4.3e-251	97.3
WP_000712650.1\|107047_107218_+	hypothetical protein	A7J285	Streptococcus_phage	1.5e-20	92.3
WP_000687453.1\|107499_107694_+	hypothetical protein	NA	NA	NA	NA
WP_001038191.1\|107686_108103_+	DUF722 domain-containing protein	A7J289	Streptococcus_phage	3.3e-72	98.6
WP_000900438.1\|108192_108645_+\|terminase	terminase small subunit	A7J290	Streptococcus_phage	3.4e-75	98.7
WP_000153206.1\|108634_109912_+\|terminase	PBSX family phage terminase large subunit	A7J291	Streptococcus_phage	7.1e-243	97.6
WP_000391587.1\|109927_111460_+\|portal	phage portal protein	A7J292	Streptococcus_phage	2.5e-287	98.2
WP_032457401.1\|111419_112868_+\|capsid	minor capsid protein	A7J293	Streptococcus_phage	1.9e-260	93.6
WP_025194522.1\|112895_113084_+	hypothetical protein	A7J294	Streptococcus_phage	1.2e-21	96.8
WP_001042288.1\|113086_113353_+	hypothetical protein	A0A097PAR8	Streptococcus_pyogenes_phage	3.5e-35	89.8
WP_000797012.1\|113508_114084_+	DUF4355 domain-containing protein	A7J296	Streptococcus_phage	4.2e-70	86.2
WP_000829744.1\|114102_114987_+	hypothetical protein	A7J297	Streptococcus_phage	3.3e-130	82.3
WP_000356703.1\|114990_115347_+\|head,tail	phage head-tail connector protein	A7J298	Streptococcus_phage	1.4e-42	75.4
WP_000639438.1\|115357_115636_+	hypothetical protein	A7J299	Streptococcus_phage	3.5e-46	97.8
WP_000053327.1\|115632_115977_+	HK97 gp10 family phage protein	A7J2A0	Streptococcus_phage	3.6e-56	100.0
WP_000386634.1\|115980_116340_+	hypothetical protein	A7J2A1	Streptococcus_phage	2.6e-57	98.3
WP_000450516.1\|116351_116984_+\|tail	phage major tail protein, TP901-1 family	A7J2A2	Streptococcus_phage	6.3e-59	67.1
WP_000424190.1\|117034_117490_+	hypothetical protein	A7J2A3	Streptococcus_phage	3.1e-55	70.9
WP_000398753.1\|117564_117795_+	hypothetical protein	A7J2A4	Streptococcus_phage	2.2e-14	59.2
WP_000929201.1\|117813_122040_+	tape measure protein	A7J2A5	Streptococcus_phage	1.4e-21	46.6
WP_000365120.1\|122052_122895_+\|tail	phage tail family protein	A7J2A6	Streptococcus_phage	2.2e-75	48.2
WP_000206519.1\|122907_126735_+\|tail	phage tail protein	A7J2A7	Streptococcus_phage	1.7e-162	49.8
WP_000391486.1\|126743_126896_+	hypothetical protein	NA	NA	NA	NA
WP_001900277.1\|126906_127323_+	DUF1366 domain-containing protein	NA	NA	NA	NA
WP_000222556.1\|127385_127547_+	hypothetical protein	A0A1X9I5T1	Streptococcus_phage	1.9e-07	56.8
WP_000564986.1\|127556_127847_+	hypothetical protein	J7KH30	Streptococcus_phage	1.8e-40	90.5
WP_000611520.1\|127848_128100_+\|holin	phage holin	J7KDR1	Streptococcus_phage	9.6e-35	94.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_ALTI01000014

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

8310 : 20375

Synechococcus_phage(28.57%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001042250.1\|8310_12036_+	phosphoribosylformylglycinamidine synthase	A6N228	Microbacterium_phage	1.9e-38	25.9
WP_000220676.1\|12269_13724_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	3.7e-54	32.7
WP_001291328.1\|13751_14774_+	phosphoribosylformylglycinamidine cyclo-ligase	R9TMC7	Synechococcus_phage	1.1e-63	42.7
WP_000685109.1\|14941_15490_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	1.4e-25	35.6
WP_000780022.1\|15512_16265_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_000166549.1\|16284_17832_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	E3SNU8	Prochlorococcus_phage	3.7e-44	52.4
WP_001045908.1\|18024_18924_+	peptidoglycan DD-metalloendopeptidase family protein	A0A221J6U0	Arthrobacter_phage	4.1e-19	45.9
WP_000783419.1\|19070_20375_+	LysM peptidoglycan-binding domain-containing protein	A0A0E3XB61	Gordonia_phage	1.2e-11	34.2

Anti-CRISPR protein detection

Acr_ID: NZ_ALTI01000014.1|WP_000783419.1|19070_20375_+|LysM-peptidoglycan-binding-domain-containing-protein

Click the colored protein region to show detailed information

Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_ALTI01000014.1|WP_000783419.1|19070_20375_+|LysM-peptidoglycan-binding-domain-containing-protein

19070_20375_+

434 aa aa

8310-20375

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_ALTI01000026_1	TypeII	1.13\|45122\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	45122-45151	30	14249-14278	0

1. spacer 1.13|45122|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to NZ_ALTI01000014 position: 14249-14278, mismatch: 0

tcaaatcatcgacggttcaaaagtaaaaga	CRISPR spacer
tcaaatcatcgacggttcaaaagtaaaaga	Protospacer
******************************

4. NZ_ALTI01000011

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr_ID: NZ_ALTI01000011.1|WP_000384271.1|6973_7300_-|replication-initiator-protein-A

Click the colored protein region to show detailed information

Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_ALTI01000011.1|WP_000384271.1|6973_7300_-|replication-initiator-protein-A

6973_7300_-

108 aa aa

AcrIIA21

hit_Aca_id	identity	query_coverage	hit_coverage
anti_CRISPR3639\|WP_000384271.1\|AcrIIA21\|II-A\|Verified\|Streptococcus	1.0	1	1.0

5. NZ_ALTI01000008

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

58666 : 69400

Streptococcus_phage(84.62%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001185985.1\|58666_59431_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	2.6e-14	24.8
WP_000178144.1\|59430_60141_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	3.1e-14	26.5
WP_001144246.1\|60159_60819_+	CBS domain-containing protein	M1NSC5	Streptococcus_phage	4.7e-65	56.5
WP_000715594.1\|60907_61543_+	dTMP kinase	M1PSC7	Streptococcus_phage	1.4e-66	60.1
WP_000364568.1\|61562_62426_+	DNA polymerase III subunit delta'	M1NSC1	Streptococcus_phage	2.5e-74	50.0
WP_000358198.1\|62456_62783_+	DNA replication initiation control protein YabA	M1PFV3	Streptococcus_phage	3.2e-30	61.1
WP_000425864.1\|62782_63652_+	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	M1PLC5	Streptococcus_phage	3.7e-110	70.7
WP_000603275.1\|63921_64557_-	copper homeostasis protein CutC	NA	NA	NA	NA
WP_000158399.1\|64689_65781_+	3-phosphoserine/phosphohydroxythreonine transaminase	M1Q1P2	Streptococcus_phage	1.7e-165	78.0
WP_001167085.1\|65848_66397_+	acetyltransferase	M1PSC3	Streptococcus_phage	1.1e-54	58.4
WP_000232152.1\|66459_67641_+	phosphoglycerate dehydrogenase	M1NSB9	Streptococcus_phage	1.1e-168	75.3
WP_000966772.1\|67697_68174_+	methylated-DNA--[protein]-cysteine S-methyltransferase	M1PFU9	Streptococcus_phage	7.1e-39	50.9
WP_000287943.1\|68175_68532_+	arsenate reductase family protein	M1PLC0	Streptococcus_phage	5.2e-42	72.6
WP_000767485.1\|68572_69400_-	exodeoxyribonuclease III	M1PSC0	Streptococcus_phage	5.1e-125	78.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

6. NZ_ALTI01000024

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

55211 : 65484

Streptococcus_phage(57.14%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000721261.1\|55211_57356_-	LTA synthase family protein	W6LM83	Streptococcus_phage	6.3e-260	67.5
WP_001037600.1\|57490_58648_+	class I SAM-dependent rRNA methyltransferase	W6LLI2	Streptococcus_phage	4.6e-140	66.0
WP_000707048.1\|58647_59325_+	type I 3-dehydroquinate dehydratase	W6LP76	Streptococcus_phage	5.3e-88	68.4
WP_001195735.1\|59418_60486_+	3-dehydroquinate synthase	NA	NA	NA	NA
WP_001269902.1\|60486_61653_+	chorismate synthase	A0A291AU41	Pandoravirus	7.1e-40	34.4
WP_000024627.1\|61736_62072_+	YlbF/YmcA family competence regulator	A0A1X9I5Y8	Streptococcus_phage	1.2e-19	39.4
WP_000043879.1\|62246_63596_+	glutathione-disulfide reductase	A0A2K5B2C5	Erysipelothrix_phage	2.2e-32	25.5
WP_000033716.1\|63639_64092_-	hypothetical protein	NA	NA	NA	NA
WP_000638897.1\|64338_65484_+	cysteine desulfurase	A0A1X6WFP1	Pacmanvirus	7.3e-29	28.4

DBSCAN-SWA_2

172979 : 193347

Streptococcus_phage(86.67%)

holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000119359.1\|172979_173915_+	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	5.2e-25	31.6
WP_000490874.1\|173907_174678_+	ABC transporter permease	NA	NA	NA	NA
WP_001875682.1\|174790_175021_-	CHAP domain-containing protein	H7BV84	unidentified_phage	7.0e-08	40.0
WP_001904077.1\|175723_177841_-	cadmium-translocating P-type ATPase	E4ZFI9	Streptococcus_phage	1.5e-234	62.6
WP_001058366.1\|177837_178197_-	winged helix-turn-helix transcriptional regulator	E4ZFI8	Streptococcus_phage	2.7e-22	47.3
WP_000922387.1\|178833_179040_+	hypothetical protein	A0A1B0RXE8	Streptococcus_phage	1.5e-14	92.5
WP_000661395.1\|179017_179413_+\|holin	phage holin family protein	A0A1B0RXK5	Streptococcus_phage	3.2e-45	99.2
WP_000515884.1\|179419_180889_+	LysM peptidoglycan-binding domain-containing protein	A0A1X9I678	Streptococcus_phage	3.5e-262	92.8
WP_000382663.1\|180997_181159_+	hypothetical protein	M1PSL4	Streptococcus_phage	2.3e-18	88.7
WP_000956790.1\|181352_182186_+	recombinase family protein	M1NSJ1	Streptococcus_phage	9.9e-153	96.0
WP_000756015.1\|182185_183748_+	recombinase family protein	Q6DMS5	Streptococcus_phage	3.2e-213	71.7
WP_000615743.1\|183821_184436_+	CadD family cadmium resistance transporter	NA	NA	NA	NA
WP_000711078.1\|184448_184787_+	Cd(II)/Zn(II)-sensing metalloregulatory transcriptional regulator CadX	E4ZFI8	Streptococcus_phage	1.7e-10	33.3
WP_000103845.1\|185244_185691_+	CopY/TcrY family copper transport repressor	NA	NA	NA	NA
WP_000711500.1\|186301_186508_+	copper chaperone TcrZ	NA	NA	NA	NA
WP_001245437.1\|186646_188734_+	cadmium-translocating P-type ATPase	E4ZFI9	Streptococcus_phage	1.7e-60	29.9
WP_000934381.1\|188907_189504_-	TIGR01906 family membrane protein	NA	NA	NA	NA
WP_000540327.1\|189512_190301_+	hypothetical protein	NA	NA	NA	NA
WP_001072464.1\|190354_190654_-	hypothetical protein	Q6DMX6	Streptococcus_phage	5.3e-48	96.0
WP_000592533.1\|190856_191225_+	helix-turn-helix transcriptional regulator	E4ZFI8	Streptococcus_phage	7.2e-63	99.2
WP_000086363.1\|191217_193347_+	cadmium-translocating P-type ATPase	E4ZFI9	Streptococcus_phage	0.0e+00	100.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

7. NZ_ALTI01000026

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_ALTI01000026_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_ALTI01000026_1

44295-45253

TypeII

II-A

Consensus_repeat	Method
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	CRT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	PILER-CR
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	CRISPRCasFinder

14 spacers

csn2,cas2,cas1,cas9

The CRISPR arrays of NZ_ALTI01000026_1

>merge|NZ_ALTI01000026|1|44295-45253|CRT,PILER-CR,CRISPRCasFinder
TGATGTCCTAGCATAATAACAGCACAGCTCTAAAACTATCCATCTCGGTGAGATGAGAATTAGCTTGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACTAGTATAATGCTCGAGGACTATCCGTCTGAGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACTCAAAATATCACACATAAATCATCCTCCTTGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACAATGGAATTATCACAAGCGGGGCATATGGTGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACAGAGCGGTCAGCATGTTGTGCAACGCTGGGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACAGACTGCTTGCGCTTTGGTGGATTGTATGTGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACATCGGGTCTATATGCCCCCTAAAATCAATTGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACAGTCTAATCGCCTATTATTATCCAGATAAAGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACTGAAAGCGAATTGACGATAAGCGAAAATGAGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACTCATTACTTGTATTTATAAATGATTTAGCAGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACATAGACCCATCACGAATCGAACGTGATTAAGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACATCGAGCTTTCACTTTGTTTAACATGGCTTGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACTCAAATCATCGACGGTTCAAAAGTAAAAGAGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACTAAGTGAGTGACTTCTTCGGTTGAATAGTCGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC

>NZ_ALTI01000026|1|1|44295-45253|CRT
TGATGTCCTAGCATAATAACAGCACAGCTCTAAAAC	TATCCATCTCGGTGAGATGAGAATTAGCTT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TAGTATAATGCTCGAGGACTATCCGTCTGA
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TCAAAATATCACACATAAATCATCCTCCTT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	AATGGAATTATCACAAGCGGGGCATATGGT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	AGAGCGGTCAGCATGTTGTGCAACGCTGG
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	AGACTGCTTGCGCTTTGGTGGATTGTATGT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	ATCGGGTCTATATGCCCCCTAAAATCAATT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	AGTCTAATCGCCTATTATTATCCAGATAAA
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TGAAAGCGAATTGACGATAAGCGAAAATGA
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TCATTACTTGTATTTATAAATGATTTAGCA
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	ATAGACCCATCACGAATCGAACGTGATTAA
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	ATCGAGCTTTCACTTTGTTTAACATGGCTT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TCAAATCATCGACGGTTCAAAAGTAAAAGA
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TAAGTGAGTGACTTCTTCGGTTGAATAGTC
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC

>NZ_ALTI01000026|1|1|44361-45253|PILER-CR
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TAGTATAATGCTCGAGGACTATCCGTCTGA
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TCAAAATATCACACATAAATCATCCTCCTT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	AATGGAATTATCACAAGCGGGGCATATGGT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	AGAGCGGTCAGCATGTTGTGCAACGCTGG
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	AGACTGCTTGCGCTTTGGTGGATTGTATGT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	ATCGGGTCTATATGCCCCCTAAAATCAATT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	AGTCTAATCGCCTATTATTATCCAGATAAA
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TGAAAGCGAATTGACGATAAGCGAAAATGA
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TCATTACTTGTATTTATAAATGATTTAGCA
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	ATAGACCCATCACGAATCGAACGTGATTAA
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	ATCGAGCTTTCACTTTGTTTAACATGGCTT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TCAAATCATCGACGGTTCAAAAGTAAAAGA
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TAAGTGAGTGACTTCTTCGGTTGAATAGTC
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC

>NZ_ALTI01000026|1|1|44361-45253|CRISPRCasFinder
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TAGTATAATGCTCGAGGACTATCCGTCTGA
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TCAAAATATCACACATAAATCATCCTCCTT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	AATGGAATTATCACAAGCGGGGCATATGGT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	AGAGCGGTCAGCATGTTGTGCAACGCTGG
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	AGACTGCTTGCGCTTTGGTGGATTGTATGT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	ATCGGGTCTATATGCCCCCTAAAATCAATT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	AGTCTAATCGCCTATTATTATCCAGATAAA
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TGAAAGCGAATTGACGATAAGCGAAAATGA
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TCATTACTTGTATTTATAAATGATTTAGCA
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	ATAGACCCATCACGAATCGAACGTGATTAA
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	ATCGAGCTTTCACTTTGTTTAACATGGCTT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TCAAATCATCGACGGTTCAAAAGTAAAAGA
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TAAGTGAGTGACTTCTTCGGTTGAATAGTC
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_ALTI01000026.1\|WP_000438314.1\|43320_43737_-\|nucleoside-diphosphate-kinase	unknown	unknown	gnl\|CDD\|179085
NZ_ALTI01000026.1\|WP_000323544.1\|52361_53132_-\|TIGR01457-family-HAD-type-hydrolase	unknown	unknown	gnl\|CDD\|319832
NZ_ALTI01000026.1\|WP_000065321.1\|32759_33863_-\|DUF2974-domain-containing-protein	unknown	unknown	gnl\|CDD\|371412
NZ_ALTI01000026.1\|WP_001056394.1\|30678_31290_-\|TVP38/TMEM64-family-protein	unknown	unknown	gnl\|CDD\|223475
NZ_ALTI01000026.1\|WP_000159234.1\|55500_55872_-\|YbgA-family-protein	unknown	unknown	gnl\|CDD\|377982
NZ_ALTI01000026.1\|WP_000665410.1\|36806_37241_-\|peptide-methionine-(R)-S-oxide-reductase-MsrB	unknown	unknown	gnl\|CDD\|234692
NZ_ALTI01000026.1\|WP_001040081.1\|47215_51328_-\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	COG3513_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|273840
NZ_ALTI01000026.1\|WP_001019133.1\|41352_43185_-\|elongation-factor-4	unknown	unknown	gnl\|CDD\|235462
NZ_ALTI01000026.1\|WP_000929489.1\|46344_47214_-\|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|274694
NZ_ALTI01000026.1\|WP_000678298.1\|38472_41106_-\|pneumococcal-type-histidine-triad-protein	unknown	unknown	gnl\|CDD\|380193
NZ_ALTI01000026.1\|WP_000122194.1\|46006_46348_-\|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226043
NZ_ALTI01000026.1\|WP_000653357.1\|51715_52372_-\|TIGR01906-family-membrane-protein	unknown	unknown	gnl\|CDD\|226884
NZ_ALTI01000026.1\|WP_000168898.1\|33862_36655_-\|cation-transporting-P-type-ATPase	unknown	unknown	gnl\|CDD\|223550
NZ_ALTI01000026.1\|WP_000180007.1\|37713_38373_-\|HD-domain-containing-protein	unknown	unknown	gnl\|CDD\|224336
NZ_ALTI01000026.1\|WP_000590706.1\|45354_46020_-\|type-II-A-CRISPR-associated-protein-Csn2	csn2	pfam09711_csn2_CAS-II-A	gnl\|CDD\|213408
NZ_ALTI01000026.1\|WP_000146565.1\|32000_32639_+\|CatB-related-O-acetyltransferase	unknown	unknown	gnl\|CDD\|100040
NZ_ALTI01000026.1\|WP_000621142.1\|37240_37705_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_ALTI01000026.1\|WP_000523795.1\|53132_53870_-\|acyl-ACP-thioesterase	unknown	unknown	gnl\|CDD\|366738
NZ_ALTI01000026.1\|WP_000914664.1\|53873_55004_-\|oxygen-independent-coproporphyrinogen-III-oxidase	unknown	unknown	gnl\|CDD\|236309
NZ_ALTI01000026.1\|WP_001241816.1\|55095_55476_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|131381

Protein	Function_ID	Function_description	E-value
NZ_ALTI01000026.1\|WP_000438314.1\|43320_43737_-\|nucleoside-diphosphate-kinase	gnl\|CDD\|179085	PRK00668, ndk, mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-; Validated.	4.64422e-78
NZ_ALTI01000026.1\|WP_000323544.1\|52361_53132_-\|TIGR01457-family-HAD-type-hydrolase	gnl\|CDD\|319832	cd07530, HAD_Pase_UmpH-like, UmpH/NagD family phosphatase, similar to Escherichia coli UmpH UMP phosphatase/NagD nucleotide phosphatase and Mycobacterium tuberculosis Rv1692 glycerol 3-phosphate phosphatase. Escherichia coli UmpH/NagD is a ribonucleoside tri-, di-, and monophosphatase with a preference for purines, it shows peak activity with UMP and functions in UMP-degradation. It is also an effective phosphatase with AMP, GMP and CMP. Mycobacterium tuberculosis phosphatase, Rv1692 is a glycerol 3-phosphate phosphatase. Rv1692 is the final enzyme involved in glycerophospholipid recycling/catabolism. This subfamily belongs to the UmpH/NagD phosphatase family, and to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	1.19143e-132
NZ_ALTI01000026.1\|WP_000065321.1\|32759_33863_-\|DUF2974-domain-containing-protein	gnl\|CDD\|371412	pfam11187, DUF2974, Protein of unknown function (DUF2974). This bacterial family of proteins has no known function.	1.82724e-105
NZ_ALTI01000026.1\|WP_001056394.1\|30678_31290_-\|TVP38/TMEM64-family-protein	gnl\|CDD\|223475	COG0398, COG0398, Uncharacterized conserved protein [Function unknown].	6.1265e-31
NZ_ALTI01000026.1\|WP_000159234.1\|55500_55872_-\|YbgA-family-protein	gnl\|CDD\|377982	pfam08349, DUF1722, Protein of unknown function (DUF1722). This domain of unknown function is found in bacteria and archaea and is homologous to the hypothetical protein ybgA from E. coli.	6.08694e-28
NZ_ALTI01000026.1\|WP_000665410.1\|36806_37241_-\|peptide-methionine-(R)-S-oxide-reductase-MsrB	gnl\|CDD\|234692	PRK00222, PRK00222, peptide-methionine (R)-S-oxide reductase MsrB.	6.40832e-86
NZ_ALTI01000026.1\|WP_001040081.1\|47215_51328_-\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	gnl\|CDD\|273840	TIGR01865, conserved_hypothetical_protein, CRISPR subtype II/NMENI RNA-guided endonuclease Cas9/Csn1. CRISPR loci appear to be mobile elements with a wide host range. This model represents a protein found only in CRISPR-containing species, near other CRISPR-associated proteins (cas), as part of the NMENI subtype of CRISPR/Cas locus. The species range so far for this protein is animal pathogens and commensals only.	0
NZ_ALTI01000026.1\|WP_001019133.1\|41352_43185_-\|elongation-factor-4	gnl\|CDD\|235462	PRK05433, PRK05433, GTP-binding protein LepA; Provisional.	0
NZ_ALTI01000026.1\|WP_000929489.1\|46344_47214_-\|type-II-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274694	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is a prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 variant of the NMENI subtype of CRISPR/Cas system.	2.54315e-139
NZ_ALTI01000026.1\|WP_000678298.1\|38472_41106_-\|pneumococcal-type-histidine-triad-protein	gnl\|CDD\|380193	NF033189, internalin_A, class 1 internalin InlA. Internalins, as found in the intracellular human pathogen Listeria monocytogenes, are paralogous surface or secreted proteins with an N-terminal signal peptide, leucine-rich repeats, and usually a C-terminal LPXTG processing and cell surface anchoring site. See PMID:17764999 for a general discussion of internalins. Members of this family are internalin A (InlA), a class 1 (LPXTG-type) internalin.	9.80578e-22
NZ_ALTI01000026.1\|WP_000122194.1\|46006_46348_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	2.38084e-52
NZ_ALTI01000026.1\|WP_000653357.1\|51715_52372_-\|TIGR01906-family-membrane-protein	gnl\|CDD\|226884	COG4478, COG4478, Predicted membrane protein [Function unknown].	9.75792e-52
NZ_ALTI01000026.1\|WP_000168898.1\|33862_36655_-\|cation-transporting-P-type-ATPase	gnl\|CDD\|223550	COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism].	0
NZ_ALTI01000026.1\|WP_000180007.1\|37713_38373_-\|HD-domain-containing-protein	gnl\|CDD\|224336	COG1418, COG1418, Predicted HD superfamily hydrolase [General function prediction only].	2.66997e-33
NZ_ALTI01000026.1\|WP_000590706.1\|45354_46020_-\|type-II-A-CRISPR-associated-protein-Csn2	gnl\|CDD\|213408	cd09758, Csn2, CRISPR/Cas system-associated protein Csn2. Csn2 is a Nmeni subtype-specific Cas protein, which may function in the adaptation process which mediates the incorporation of foreign nucleic acids into the microbial host genome. Csn 2 may interact directly with double-stranded DNA. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA. Csn2 has been predicted to be a functional analog of Cas4 based on anti-correlated phyletic patterns; also known as SPy1049 family.	3.61399e-122
NZ_ALTI01000026.1\|WP_000146565.1\|32000_32639_+\|CatB-related-O-acetyltransferase	gnl\|CDD\|100040	cd03349, LbH_XAT, Xenobiotic acyltransferase (XAT): The XAT class of hexapeptide acyltransferases is composed of a large number of microbial enzymes that catalyze the CoA-dependent acetylation of a variety of hydroxyl-bearing acceptors such as chloramphenicol and streptogramin, among others. Members of this class of enzymes include Enterococcus faecium streptogramin A acetyltransferase and Pseudomonas aeruginosa chloramphenicol acetyltransferase. They contain repeated copies of a six-residue hexapeptide repeat sequence motif (X-[STAV]-X-[LIV]-[GAED]-X) and adopt a left-handed parallel beta helix (LbH) structure. The active enzyme is a trimer with CoA and substrate binding sites at the interface of two separate LbH subunits. XATs are implicated in inactivating xenobiotics leading to xenobiotic resistance in patients.	6.8383e-72
NZ_ALTI01000026.1\|WP_000621142.1\|37240_37705_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	5.91796e-19
NZ_ALTI01000026.1\|WP_000523795.1\|53132_53870_-\|acyl-ACP-thioesterase	gnl\|CDD\|366738	pfam01643, Acyl-ACP_TE, Acyl-ACP thioesterase. This family consists of various acyl-acyl carrier protein (ACP) thioesterases (TE) these terminate fatty acyl group extension via hydrolysing an acyl group on a fatty acid.	3.68196e-111
NZ_ALTI01000026.1\|WP_000914664.1\|53873_55004_-\|oxygen-independent-coproporphyrinogen-III-oxidase	gnl\|CDD\|236309	PRK08599, PRK08599, oxygen-independent coproporphyrinogen III oxidase.	0
NZ_ALTI01000026.1\|WP_001241816.1\|55095_55476_-\|hypothetical-protein	gnl\|CDD\|131381	TIGR02328, TIGR02328, conserved hypothetical protein. Members of this protein are found in a small number of taxonomically well separated species, yet are strongly conserved, suggesting lateral gene transfer. Members are found in Treponema denticola, Clostridium acetobutylicum, and several of the Firmicutes. The function of this protein is unknown. [Hypothetical proteins, Conserved].	6.45558e-80

>NZ_ALTI01000026.1|WP_000438314.1|43320_43737_-|nucleoside-diphosphate-kinase
MEQTFFMIKPDGVKRGFIGEVISRIERRGFSIDRLEVRYADADILKRHYAELTDRPFFPTLVDYMTSGPVIIGVISGEEVISTWRTMMGSTNPKDALPGTIRGDFAQAPSPNQATCNIVHGSDSPESATREIAIWFNN
>NZ_ALTI01000026.1|WP_001019133.1|41352_43185_-|elongation-factor-4
MNIEDLKKRQEKIRNFSIIAHIDHGKSTLADRILEKTETVSSREMQAQLLDSMDLERERGITIKLNAIELNYTAKDGETYIFHLIDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQTLANVYLALDNDLEILPVINKIDLPAADPERVRAEVEDVIGLDASEAVLASAKAGIGIEEILEQIVEKVPAPTGEVDAPLQALIFDSVYDAYRGVILQVRIVNGMVKPGDKIQMMSNGKTFDVTEVGIFTPKAVGRDFLATGDVGYIAASIKTVADTRVGDTITLANNPAIEPLHGYKQMNPMVFAGLYPIESNKYNDLREALEKLQLNDASLQFEPETSQALGFGFRCGFLGLLHMDVIQERLEREFNIDLIMTAPSVVYHVNTTDGEMLEVSNPSEFPDPTRVDSIEEPYVKAQIMVPQEFVGAVMELAQRKRGDFVTMDYIDDNRVNVIYQIPLAEIVFDFFDKLKSSTRGYASFDYEISEYRRSQLVKMDILLNGDKVDALSFIVHKEFAYERGKLIVDKLKKIIPRQQFEVPIQAAIGQKIVARSDIKALRKNVLAKCYGGDVSRKRKLLEKQKAGKKRMKAIGSVEVPQEAFLSVLSMDDDDKK
>NZ_ALTI01000026.1|WP_000678298.1|38472_41106_-|pneumococcal-type-histidine-triad-protein
MKGQKIIALAGLVLSCHFALTACHTQEHKNSHHIKTKQVAKKKANKKKVSVKESHKKRKGVAGVDFPTDDGFLLTKDSKILSHTDSGIVVAHGNHSHFIFYSDLKGSKFSYLIPNANTKTNKNQAVRNFKAGAVAVNTLNDGYVFNPADIVSEDANGYVVRHGDHFHYIPKASLSQQKQVQASRAVSRLGNQSNSHYRVNSSKIAGLHYPTSNGFLFNGRGIKGTTPTGILVEHHNHLHFISFADLRKGGWGSIADRYQPQKKADSKKQSPSSKKPRTENTLPKDIKDKLAYLARELHLDISRIRVLKTLNGEIGFEYPHDDHTHVIMAKDIDLSKPIPNPHHDDEDHHKGHHHDESDHKHEEHEHTKSNKLSDEDQKKLIYLAEKLGLNPNQIEVLTSEDGSIIFKYPHDDHSHTIASKDIEIGKPIPDGHHDHSHAKDKVGMATLKQIGFDDEIIQDILHADAPTPFPSNETNPEKMRQWLATVTKINIGQRTNPFQRFGLSLMPNIEVLGIGFTPINDMTPVLQFKKLKQLWMTNTGITDYSFLDKMPLLEGLDISQNGIKDLSFLTKYKQLSLIAAANNGITSLKPLAELPNLQFLVLSHNNISDLTPLSNLTKLQELHLDHNNVKNLSALSGKKDLKVLDLSNNKSADLSTLKTTSLETLLLNETNTSNLSFLKQNPKVSNLTINNAKLASLDGIEESDEIVKVEAEGNQIKSLVLKNKQGSLKFLNVTNNQLTSLEGVNNYTSLETLSVSKNKLESLDIKTPNKTVTNLDFSHNNVPTSQLKLNEKNIPEAVAKNFPAVVEGSMVGNGSLAEKAAMASKEDKQVSDNTNHQKNTEKSAQANADSKKENPKTHDEHHDHEETDHAHVGHHHH
>NZ_ALTI01000026.1|WP_000180007.1|37713_38373_-|HD-domain-containing-protein
MTMVKREDVILNATENMVHHKLKNDPSGHDWFHIVRVRNLAVELAHKEGANTFICQMAALLHDIIDDKICQDSKQASYELTQWLYSQDLAIAEVEHILDILENISFKAGTGLTMKTLEGQIVQDADRLDAMGAIGIARTMAYSGSKGRLIHDPNLKPRENLTLEEYRNGQDTAIMHFYEKLLKLKDLMNTKQGKMLAQKRHDFLELYLAEFYAEWNGKR
>NZ_ALTI01000026.1|WP_000621142.1|37240_37705_-|GNAT-family-N-acetyltransferase
MIRRAKEKDLPDIAELLKQILMLHHEVRPDIFHTRGSKFSKEQLKEMLIDESKPIFVYESDEGKVVAHLFLQLQEKRDLPRKSFKTLYIDDLCIDEEVRGQQIGQKLMDFARQYAKKHGCYNITLNVWNDNQRAVSFYEKLGFKPQQTQMEEIL
>NZ_ALTI01000026.1|WP_000665410.1|36806_37241_-|peptide-methionine-(R)-S-oxide-reductase-MsrB
MKETQEELRQRIGHTAYQVTQNSATEHAFTGKYDDFFEEGIYVDIVSGEVLFSSLDKFQSGCGWPAFSKPIENRMVTNHQDHSHGMHRIEVRSRQADSHLGHVFNDGPVDAGGLRYCINSAALDFIPYDQMAKRGYGDYLSLFD
>NZ_ALTI01000026.1|WP_000168898.1|33862_36655_-|cation-transporting-P-type-ATPase
MASTNNVSDTNTRFAKEELEEVFEELGTTQGGLSDEEVAVRQKKYGLNLLSEVKQESIILLFLKNFTSLMAILLWVGGFVAIVSNSLELGLAIWMVNVINGIFSFIQEYRASQATQALEKMLPSYSRVLRKGSEEKILSEQLVPGDIVLIEEGDRISADGRLIKTTDLQVNQSALTGESNPIYKDSNVENDQSKTLIECDNMVFAGTTVSSGSATMVVTAIGMQTQFGQIADLTQGMKSEKSPLQRELDRLTKQISIISITVGIIFFLAATFFVKEPVSKSFIFALGMIVAFIPEGLLPTVTLSLAMAVQRMAKEHALVKKLSSVETLGATSVICSDKTGTLTQNEMTVNHLWQNGKSYQVTGLGYAPEGQILFEGDNICFGNSDRGDLEKLIRFAHLCSNAQVLPPNDDRSTYTVLGDPTEACLNVLLEKSGINIQENRKFAPRLKELPFDSVRKRMTTIHSLGGDEKDKKISITKGAPKEILDLSDYVLSDGKVIPLNKEERNKIQLANDTFAKDGLRVLAVSYCDIEGFSKEQWTQENLEQHMVFIGLIAMSDPPREGVREAIDKCHAASIRIIMVTGDYGLTALSIAKNIGIIRNDDAKVISGLELSEMTDSQLKKELSGEVVFARVAPEQKYRVVTILQEMGEVVAVTGDGVNDAPALKKSDIGVAMGVTGTDVAKESADMILTDDHFASIVHAVEEGRAVYQNIKKFLTYIFNSNTPEAVPSAFFLFSKGFIPLPLTVMQILAVDLGTDMLPALGLGVEPPETDVMNRPPRRLTDRLLDKGLLIKSFLWYGTIESVLAMGGFFWAHYLRYGNFTFFVANGIPYREATTMTLGAIIFSQIGMVMNSRTSYQSIKALSIFGNKLINFGIIMEILAFLVLVYVPLFHNLFNTASLGLSHWLYLISCPFIMIGLDEVRKLFSSRKNKR
>NZ_ALTI01000026.1|WP_000065321.1|32759_33863_-|DUF2974-domain-containing-protein
MSNIITYLKNNSNLTFDELALNDVDILCLNEFGYISFEKLINTTEMKSVLVCELYHEYLQTMAKSYSFMFTSQRHDLCQLMMTSKRFKNLTLSYYRAEISLEFEKQFAAMVFTIPNINYHQVVFRGTDANLIGWKEDFKLTYMREISAHRSAIKYLNTILPYFDKVVLSGHSKGGNLALYAAMFTKPDLKAKIDLIWLIDSPGLQKTLLPTTEYKTTKQKCIRLLPEESIVGMMLYSDIEPLIISSNARGILQHDVTTWEIQEPAILKTGTGLSLKSICFEKTFQQWMAELKSQERKLFFDLLFDSFLSSGVSSLDDFNLASRAKMMKAFHSFRELDDDKKRLFNKSLKLLVTIFWGAYHDNSRETK
>NZ_ALTI01000026.1|WP_000146565.1|32000_32639_+|CatB-related-O-acetyltransferase
MASILKKHLEKRLELKNDPMRTDMSTGASYPKYGFSVGKYTYGYQQFFYEGVNLKEIGAFCSIAQNVTITGLNHPTDHITTNPFIYYKSRGFINEDRADLIDEKKNGKVIIGNDVWIGTNVTILPSVTIGNGAIIGAGSVITKDIPDYAVVAGTPAKIIKYRFSEEEITLLNASQWWNWSDEAIKEHISEFSDKKEFFNTLKSISENKNHKL
>NZ_ALTI01000026.1|WP_001056394.1|30678_31290_-|TVP38/TMEM64-family-protein
MNMKLSKRYRFWQKVIKALGVLALIATLVLVVYLYKLGILNDSNELKDLVHKYEFWGPMIFIVAQIVQIVFPVIPGGVTTVAGFLIFGPTLGFIYNYIGIIIGSVILFWLVKFYGRKFVLLFMDQKTFDKYESKLETSGYEKFFIFCMASPISPADIMVMITGLSNMSIKRFVTIIMITKPISIIGYSYLWIYGGDILKNFLN
>NZ_ALTI01000026.1|WP_000590706.1|45354_46020_-|type-II-A-CRISPR-associated-protein-Csn2
MIKINFPILDEPLVLSNATILTIEDVSVYSSLVKHFYQYDVDEHLKLFDDKQKSLKATELMLVTDILGYDVNSAPILKLIHGDLENQFNEKPEVKSMVEKLAATITELIAFECLENELDLEYDEITILELIKALGVKIETQSDTIFEKCFEIIQVYHYLTKKNLLVFVNSGAYLTKDEVIKLCEYINLMQKSVLFLEPRRLYDLPQYVIDKDYFLIGENMV
>NZ_ALTI01000026.1|WP_000122194.1|46006_46348_-|CRISPR-associated-endonuclease-Cas2
MSYRYMRMILMFDMPTETAEERKAYRKFRKFLLSEGFIMHQFSVYSKLLLNNTANNAMIGRLKVNNPKKGNITLLTVTEKQFARMVYLHGERNTSVANSDSRLVFLGDSYDQD
>NZ_ALTI01000026.1|WP_000929489.1|46344_47214_-|type-II-CRISPR-associated-endonuclease-Cas1
MAGWRTVVVNTHSKLSYKNNHLIFKDSYQTEMIHLSEIDILIMETTDIVLSTMLIKRLVDENILVIFCDDKRLPTAMLMPYYARHDSSLQLSRQMSWIEDVKADVWTSIIAQKILNQSFYLGECSFFEKSQSIMNLYHDLEPFDPSNREGHAARIYFNTLFGNDFSREQDNPINAGLDYGYSLLLSMFAREVVKCGCMTQFGLKHANQFNQFNLASDIMEPFRPIVDRIIYENRQSDFVKMKRELFSMFSETYSYNGKEMYLSNIVSDYTKKVIKSLNSDGNGIPEFRI
>NZ_ALTI01000026.1|WP_001040081.1|47215_51328_-|type-II-CRISPR-RNA-guided-endonuclease-Cas9
MNKPYSIGLDIGTNSVGWSIITDDYKVPAKKMRVLGNTDKEYIKKNLIGALLFDGGNTAADRRLKRTARRRYTRRRNRILYLQEIFAEEMSKVDDSFFHRLEDSFLVEEDKRGSKYPIFATLQEEKDYHEKFSTIYHLRKELADKKEKADLRLIYIALAHIIKFRGHFLIEDDSFDVRNTDISKQYQDFLEIFNTIFENNDLLSQNVDVEAILTDKISKSAKKDRILAQYPNQKSTGIFAEFLKLIVGNQADFKKYFNLEDKTPLQFAKDSYDEDLENLLGQIGDEFADLFSAAKKLYDSVLLSGILTVIDLSTKAPLSASMIQRYDEHREDLKQLKQFVKASLPEKYQEIFADSSKDGYAGYIEGKTNQEAFYKYLSKLLTKQEDSENFLEKIKNEDFLRKQRTFDNGSIPHQVHLTELKAIIRRQSEYYPFLKENQDRIEKILTFRIPYYIGPLAREKSDFAWMTRKTDDSIRPWNFEDLVDKEKSAEAFIHRMTNNDFYLPEEKVLPKHSLIYEKFTVYNELTKVRYKNEQGETYFFDSNIKQEIFDGVFKEHRKVSKKKLLDFLAKEYEEFRIVDVIGLDKENKAFNASLGTYHDLEKILDKDFLDNPDNESILEDIVQTLTLFEDREMIKKRLENYKDLFTESQLKKLYRRHYTGWGRLSAKLINGIRDKESQKTILDYLIDDGRSNRNFMQLINDDGLSFKSIISKAQAGSHSDNLKEVVGELAGSPAIKKGILQSLKIVDELVKVMGYEPEQIVVEMARENQTTNQGRRNSRQRYKLLDDGVKNLASDLNGNILKEYPTDNQALQNERLFLYYLQNGRDMYTGEALDIDNLSQYDIDHIIPQAFIKDDSIDNRVLVSSAKNRGKSDDVPSLEIVKDCKVFWKKLLDAKLMSQRKYDNLTKAERGGLTSDDKARFIQRQLVETRQITKHVARILDERFNNELDSKGRRIRKVKIVTLKSNLVSNFRKEFGFYKIREVNNYHHAHDAYLNAVVAKAILTKYPQLEPEFVYGDYPKYNSYKTRKSATEKLFFYSNIMNFFKTKVTLADGTVVVKDDIEVNNDTGEIVWDKKKHFATVRKVLSYPQNNIVKKTEIQTGGFSKESILAHGNSDKLIPRKTKDIYLDPKKYGGFDSPIVAYSVLVVADIKKGKAQKLKTVTELLGITIMERSRFEKNPSAFLESKGYLNIRADKLIILPKYSLFELENGRRRLLASAGELQKGNELALPTQFMKFLYLASRYNESKGKPEEIEKKQEFVNQHVSYFDDILQLINDFSKRVILADANLEKINKLYQDNKENISVDELANNIINLFTFTSLGAPAAFKFFDKIVDRKRYTSTKEVLNSTLIHQSITGLYETRIDLGKLGED
>NZ_ALTI01000026.1|WP_000653357.1|51715_52372_-|TIGR01906-family-membrane-protein
MKDKLLVVLTWIWIISLATLATIYIAWLIYPIEIQFLKLEKVVYLKAETIYYNFNKLMIYLTHPFISDLNMPSFPSSEDGLKHFADVKYLFTLAHGLFVILTFPVIYFLRRGWKQKSIFLYEGFFKIAIMLPIFIVVCAFLLGFDQFFTLFHEVLFPGDSTWQFNPLTDPVIWILPETFFLHCFIIFLLIYETITIILLIIGRKHLKLRKYKNKMQAL
>NZ_ALTI01000026.1|WP_000323544.1|52361_53132_-|TIGR01457-family-HAD-type-hydrolase
MAYKGYLIDLDGTIYKGKSRIPAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVETPLETIYTATMATVDYMNDMNRGKTAYVIGEEGLKKAIADAGYVEDTKNPAYVVVGLDWNVTYDKLATATLAIQNGALFIGTNPDLNIPTERGLLPGAGSLNALLEAATRIKPVFIGKPNAIIMNKALEILNIPRNQAVMVGDNYLTDIMAGINNDIDTLLVTTGFTTVEEVPDLPIQPSYVLASLDEWTFNEG
>NZ_ALTI01000026.1|WP_000523795.1|53132_53870_-|acyl-ACP-thioesterase
MGLLYRETYEVPFYESDTNHYMKLPQLLALALQISAKQSLKLGIGDDIVFKRYGLVWVVTDYIIDIERLPKHAEKIVIETEAKAHNKLLCYRYFYIYGEDGQKIITISSAFVLMDFKTRKIHPVLDDITSIYQSQRIKKVIRGPKYHPIGDSKVKQYHVRYFDLDMNGHVNNSKYLEWMYDVLDLDFLSSHIPKKIDLKYIKEIQYGTDIKSHWYQDGLVTRHDIIGGDAIHAQARIEWQEKKED
>NZ_ALTI01000026.1|WP_000914664.1|53873_55004_-|oxygen-independent-coproporphyrinogen-III-oxidase
MLKKPTSAYVHIPFCTQICYYCDFSKVFIKNQPVDAYLQALIREFRSYDITELRTLYIGGGTPTSISAVQLDYLLTELSRDLNLNTLEEFTIEANPGDLTVDKIEVLQKSAVNRVSLGVQTFNDKHLKRIGRSHNEAQIYSTIDALKTAGFQNISIDLIYALPGQTMDDVRSNVAKALSLNIPHLSLYSLILEHHTVFMNKMRRGKLHLPTEDLEAEMFEYIISEMERNGFEHYEISNFTKPGFESRHNLMYWDNVEYYGVGAGASGYLDGIRYRNRGPIQHYLKGVSEGNARLSEEVLSKNEMMEEELFLGLRKKEGVSIGKFEQKFGTSFEKRYGQIVQELQSDGLLKENNGFIQMTKKGLFLGDTVAEKFIVE
>NZ_ALTI01000026.1|WP_001241816.1|55095_55476_-|hypothetical-protein
MRLWHQDIIELLPRQQLLGQHRECCALRGNGWGRKHETVDYVFRYSPYRLFAYHQLVMEEMMERGYRVSKEWLIAEYRGMKCPRYDTLNPVDLETPIYPEHNQDYLQECLWNLKAKGIDLPINKIK
>NZ_ALTI01000026.1|WP_000159234.1|55500_55872_-|YbgA-family-protein
MTKEAELLWAKHKYLVLSKSQKIYLDIRQTLKSPNCTVLDVQSLIDQAVLLEESPSQVTNAYMHIWGYFKNKAERQEKEEFLTLLEKYRKTGYQRRKLLAFLKQLLAKYPNSYLQNSSIFEEE

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Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_ALTI01000026_1	1.12\|45056\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	45056-45085	30	NZ_ALTI01000024.1	163884-163913	0	1.0
NZ_ALTI01000026_1	1.13\|45122\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	45122-45151	30	NZ_ALTI01000014.1	14249-14278	0	1.0

1. spacer 1.12|45056|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to position: 163884-163913, mismatch: 0, identity: 1.0

atcgagctttcactttgtttaacatggctt	CRISPR spacer
atcgagctttcactttgtttaacatggctt	Protospacer
******************************

2. spacer 1.13|45122|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to position: 14249-14278, mismatch: 0, identity: 1.0

tcaaatcatcgacggttcaaaagtaaaaga	CRISPR spacer
tcaaatcatcgacggttcaaaagtaaaaga	Protospacer
******************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_ALTI01000026_1	1.4\|44529\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	44529-44558	30	MK448970	Streptococcus phage Javan516, complete genome	13951-13980	0	1.0
NZ_ALTI01000026_1	1.4\|44529\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	44529-44558	30	MK448953	Streptococcus phage Javan474, complete genome	12536-12565	0	1.0
NZ_ALTI01000026_1	1.4\|44529\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	44529-44558	30	MK448945	Streptococcus phage Javan454, complete genome	13120-13149	0	1.0
NZ_ALTI01000026_1	1.4\|44529\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	44529-44558	30	MK448941	Streptococcus phage Javan446, complete genome	13885-13914	0	1.0
NZ_ALTI01000026_1	1.4\|44529\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	44529-44558	30	MK448957	Streptococcus phage Javan484, complete genome	13516-13545	0	1.0
NZ_ALTI01000026_1	1.7\|44726\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	44726-44755	30	MK448742	Streptococcus phage Javan37, complete genome	15382-15411	0	1.0
NZ_ALTI01000026_1	1.10\|44924\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	44924-44953	30	JX409894	Streptococcus phage LYGO9, complete genome	38216-38245	0	1.0
NZ_ALTI01000026_1	1.10\|44924\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	44924-44953	30	MH853356	Streptococcus phage LF2, partial genome	7600-7629	0	1.0
NZ_ALTI01000026_1	1.10\|44924\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	44924-44953	30	MK448837	Streptococcus phage Javan10, complete genome	7942-7971	0	1.0
NZ_ALTI01000026_1	1.10\|44924\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	44924-44953	30	MK448742	Streptococcus phage Javan37, complete genome	8431-8460	0	1.0
NZ_ALTI01000026_1	1.10\|44924\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	44924-44953	30	MK448851	Streptococcus phage Javan14, complete genome	11606-11635	0	1.0
NZ_ALTI01000026_1	1.11\|44990\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	44990-45019	30	JX409894	Streptococcus phage LYGO9, complete genome	31161-31190	0	1.0
NZ_ALTI01000026_1	1.11\|44990\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	44990-45019	30	MK448971	Streptococcus phage Javan52, complete genome	17509-17538	0	1.0
NZ_ALTI01000026_1	1.11\|44990\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	44990-45019	30	MK448829	Streptococcus phage Javan7, complete genome	14358-14387	0	1.0
NZ_ALTI01000026_1	1.11\|44990\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	44990-45019	30	MK448736	Streptococcus phage Javan35, complete genome	14828-14857	0	1.0
NZ_ALTI01000026_1	1.11\|44990\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	44990-45019	30	MK448956	Streptococcus phage Javan48, complete genome	16397-16426	0	1.0
NZ_ALTI01000026_1	1.11\|44990\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	44990-45019	30	MK448781	Streptococcus phage Javan5, complete genome	16850-16879	0	1.0
NZ_ALTI01000026_1	1.11\|44990\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	44990-45019	30	MK448749	Streptococcus phage Javan39, complete genome	16483-16512	0	1.0
NZ_ALTI01000026_1	1.11\|44990\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	44990-45019	30	MH853355	Streptococcus phage LF1, complete genome	5215-5244	0	1.0
NZ_ALTI01000026_1	1.11\|44990\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	44990-45019	30	MK448938	Streptococcus phage Javan44, complete genome	14829-14858	0	1.0
NZ_ALTI01000026_1	1.11\|44990\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	44990-45019	30	MH853356	Streptococcus phage LF2, partial genome	1515-1544	0	1.0
NZ_ALTI01000026_1	1.11\|44990\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	44990-45019	30	MK448911	Streptococcus phage Javan34, complete genome	14828-14857	0	1.0
NZ_ALTI01000026_1	1.11\|44990\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	44990-45019	30	MK448837	Streptococcus phage Javan10, complete genome	12886-12915	0	1.0
NZ_ALTI01000026_1	1.11\|44990\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	44990-45019	30	MK448742	Streptococcus phage Javan37, complete genome	14664-14693	0	1.0
NZ_ALTI01000026_1	1.11\|44990\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	44990-45019	30	MH853358	Streptococcus phage LF4, complete genome	5215-5244	0	1.0
NZ_ALTI01000026_1	1.11\|44990\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	44990-45019	30	MK448851	Streptococcus phage Javan14, complete genome	16770-16799	0	1.0
NZ_ALTI01000026_1	1.11\|44990\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	44990-45019	30	MK448916	Streptococcus phage Javan36, complete genome	14828-14857	0	1.0
NZ_ALTI01000026_1	1.11\|44990\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	44990-45019	30	MK448673	Streptococcus phage Javan119, complete genome	16121-16150	0	1.0
NZ_ALTI01000026_1	1.4\|44529\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	44529-44558	30	MK448829	Streptococcus phage Javan7, complete genome	10300-10329	1	0.967
NZ_ALTI01000026_1	1.4\|44529\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	44529-44558	30	MH853355	Streptococcus phage LF1, complete genome	1157-1186	1	0.967
NZ_ALTI01000026_1	1.4\|44529\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	44529-44558	30	MH853358	Streptococcus phage LF4, complete genome	1157-1186	1	0.967
NZ_ALTI01000026_1	1.5\|44595\|29\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	44595-44623	29	JX409894	Streptococcus phage LYGO9, complete genome	31781-31809	1	0.966
NZ_ALTI01000026_1	1.5\|44595\|29\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	44595-44623	29	JX409895	Streptococcus phage JX01, complete genome	599-627	1	0.966
NZ_ALTI01000026_1	1.7\|44726\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	44726-44755	30	MK448837	Streptococcus phage Javan10, complete genome	13592-13621	1	0.967
NZ_ALTI01000026_1	1.10\|44924\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	44924-44953	30	MK449010	Streptococcus phage Javan90, complete genome	8833-8862	1	0.967
NZ_ALTI01000026_1	1.10\|44924\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	44924-44953	30	MK448833	Streptococcus phage Javan87, complete genome	8833-8862	1	0.967
NZ_ALTI01000026_1	1.11\|44990\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	44990-45019	30	MK448796	Streptococcus phage Javan53, complete genome	19246-19275	1	0.967
NZ_ALTI01000026_1	1.11\|44990\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	44990-45019	30	MK448859	Streptococcus phage Javan170, complete genome	17030-17059	1	0.967
NZ_ALTI01000026_1	1.11\|44990\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	44990-45019	30	MK448672	Streptococcus phage Javan117, complete genome	12142-12171	1	0.967
NZ_ALTI01000026_1	1.11\|44990\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	44990-45019	30	MK448686	Streptococcus phage Javan157, complete genome	16294-16323	1	0.967
NZ_ALTI01000026_1	1.11\|44990\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	44990-45019	30	MK448854	Streptococcus phage Javan146, complete genome	17049-17078	1	0.967
NZ_ALTI01000026_1	1.11\|44990\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	44990-45019	30	MK448676	Streptococcus phage Javan131, complete genome	19550-19579	1	0.967
NZ_ALTI01000026_1	1.11\|44990\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	44990-45019	30	MK448688	Streptococcus phage Javan161, complete genome	16983-17012	1	0.967
NZ_ALTI01000026_1	1.12\|45056\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	45056-45085	30	MN270279	Streptococcus phage phi-SsuZKB4_rum, complete genome	26651-26680	1	0.967
NZ_ALTI01000026_1	1.12\|45056\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	45056-45085	30	MN270258	Streptococcus phage phi-SgaBSJ27_rum, complete genome	85047-85076	1	0.967
NZ_ALTI01000026_1	1.12\|45056\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	45056-45085	30	MN270259	Streptococcus phage phi-SgaBSJ31_rum, complete genome	85083-85112	1	0.967
NZ_ALTI01000026_1	1.7\|44726\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	44726-44755	30	MK448829	Streptococcus phage Javan7, complete genome	15064-15093	2	0.933
NZ_ALTI01000026_1	1.7\|44726\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	44726-44755	30	MK448736	Streptococcus phage Javan35, complete genome	15546-15575	2	0.933
NZ_ALTI01000026_1	1.7\|44726\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	44726-44755	30	MK448781	Streptococcus phage Javan5, complete genome	17568-17597	2	0.933
NZ_ALTI01000026_1	1.7\|44726\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	44726-44755	30	MH853355	Streptococcus phage LF1, complete genome	5921-5950	2	0.933
NZ_ALTI01000026_1	1.7\|44726\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	44726-44755	30	MK448938	Streptococcus phage Javan44, complete genome	15547-15576	2	0.933
NZ_ALTI01000026_1	1.7\|44726\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	44726-44755	30	MK448911	Streptococcus phage Javan34, complete genome	15546-15575	2	0.933
NZ_ALTI01000026_1	1.7\|44726\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	44726-44755	30	MH853358	Streptococcus phage LF4, complete genome	5921-5950	2	0.933
NZ_ALTI01000026_1	1.7\|44726\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	44726-44755	30	MK448916	Streptococcus phage Javan36, complete genome	15546-15575	2	0.933
NZ_ALTI01000026_1	1.7\|44726\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	44726-44755	30	MK448755	Streptococcus phage Javan423, complete genome	15837-15866	3	0.9
NZ_ALTI01000026_1	1.7\|44726\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	44726-44755	30	MK448756	Streptococcus phage Javan425, complete genome	15837-15866	3	0.9
NZ_ALTI01000026_1	1.4\|44529\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	44529-44558	30	MK448858	Streptococcus phage Javan166, complete genome	12056-12085	5	0.833
NZ_ALTI01000026_1	1.4\|44529\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	44529-44558	30	MK448975	Streptococcus phage Javan526, complete genome	12046-12075	5	0.833
NZ_ALTI01000026_1	1.4\|44529\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	44529-44558	30	MK448782	Streptococcus phage Javan501, complete genome	12385-12414	5	0.833
NZ_ALTI01000026_1	1.3\|44463\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	44463-44492	30	NZ_CP015352	Bacillus thuringiensis strain MYBT18246 plasmid p142098, complete sequence	15243-15272	6	0.8
NZ_ALTI01000026_1	1.10\|44924\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	44924-44953	30	NZ_KM521836	Staphylococcus epidermidis strain 12-00322 plasmid p12-00322, complete sequence	11677-11706	6	0.8
NZ_ALTI01000026_1	1.10\|44924\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	44924-44953	30	CP030483	Staphylococcus aureus strain ER03913.3 plasmid unnamed2, complete sequence	31342-31371	6	0.8
NZ_ALTI01000026_1	1.10\|44924\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	44924-44953	30	NZ_LR214986	Mycoplasma cynos strain NCTC10142 plasmid 13	668902-668931	6	0.8
NZ_ALTI01000026_1	1.3\|44463\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	44463-44492	30	MH491968	Escherichia phage LL5, complete genome	49602-49631	7	0.767
NZ_ALTI01000026_1	1.6\|44660\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	44660-44689	30	MG592576	Vibrio phage 1.206.O._10N.222.51.B10, partial genome	32721-32750	7	0.767
NZ_ALTI01000026_1	1.6\|44660\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	44660-44689	30	MG592457	Vibrio phage 1.082.O._10N.261.49.E4, partial genome	32579-32608	7	0.767
NZ_ALTI01000026_1	1.6\|44660\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	44660-44689	30	MG592593	Vibrio phage 1.226.O._10N.261.48.E5, partial genome	31489-31518	7	0.767
NZ_ALTI01000026_1	1.6\|44660\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	44660-44689	30	MG592605	Vibrio phage 1.239.O._10N.261.52.F6, partial genome	35421-35450	7	0.767
NZ_ALTI01000026_1	1.6\|44660\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	44660-44689	30	MG592631	Vibrio phage 1.266.O._10N.286.52.F9, partial genome	30861-30890	7	0.767
NZ_ALTI01000026_1	1.6\|44660\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	44660-44689	30	AP018321	Nostoc sp. HK-01 plasmid plasmid3 DNA, complete genome	41693-41722	7	0.767
NZ_ALTI01000026_1	1.10\|44924\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	44924-44953	30	NZ_CP032752	Lactobacillus plantarum subsp. argentoratensis strain DSM 16365 plasmid unnamed1, complete sequence	30229-30258	7	0.767
NZ_ALTI01000026_1	1.10\|44924\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	44924-44953	30	NZ_CP035135	Lactobacillus plantarum strain SRCM103311 plasmid unnamed4	69444-69473	7	0.767
NZ_ALTI01000026_1	1.10\|44924\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	44924-44953	30	MN693208	Marine virus AFVG_25M383, complete genome	16271-16300	7	0.767
NZ_ALTI01000026_1	1.10\|44924\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	44924-44953	30	MN101223	Klebsiella phage KOX10, complete genome	13181-13210	7	0.767
NZ_ALTI01000026_1	1.10\|44924\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	44924-44953	30	MN693725	Marine virus AFVG_250M494, complete genome	42590-42619	7	0.767
NZ_ALTI01000026_1	1.10\|44924\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	44924-44953	30	MN101224	Klebsiella phage KOX11, complete genome	3699-3728	7	0.767
NZ_ALTI01000026_1	1.10\|44924\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	44924-44953	30	KT001919	Klebsiella phage Miro, complete genome	138215-138244	7	0.767
NZ_ALTI01000026_1	1.10\|44924\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	44924-44953	30	HQ918180	Klebsiella phage KP27, complete genome	135038-135067	7	0.767
NZ_ALTI01000026_1	1.10\|44924\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	44924-44953	30	KT001918	Klebsiella phage Matisse, complete genome	138027-138056	7	0.767
NZ_ALTI01000026_1	1.10\|44924\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	44924-44953	30	LT607758	Klebsiella phage PMBT1 genome assembly, complete genome: monopartite	136600-136629	7	0.767
NZ_ALTI01000026_1	1.10\|44924\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	44924-44953	30	KX130727	Escherichia phage phT4A, partial genome	131133-131162	7	0.767
NZ_ALTI01000026_1	1.10\|44924\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	44924-44953	30	KT321315	Enterobacter phage phiEap-3, complete genome	136043-136072	7	0.767
NZ_ALTI01000026_1	1.10\|44924\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	44924-44953	30	MN101221	Klebsiella phage KOX8, complete genome	12515-12544	7	0.767
NZ_ALTI01000026_1	1.10\|44924\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	44924-44953	30	GU295964	Klebsiella phage KP15, complete genome	136387-136416	7	0.767
NZ_ALTI01000026_1	1.6\|44660\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	44660-44689	30	MG592597	Vibrio phage 1.233.A._10N.261.51.E6, partial genome	32565-32594	8	0.733
NZ_ALTI01000026_1	1.6\|44660\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	44660-44689	30	MG592442	Vibrio phage 1.064.O._10N.261.52.E2, partial genome	31465-31494	8	0.733
NZ_ALTI01000026_1	1.6\|44660\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	44660-44689	30	MG592482	Vibrio phage 1.108.O._10N.222.51.A4, partial genome	31073-31102	8	0.733
NZ_ALTI01000026_1	1.6\|44660\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	44660-44689	30	MG592598	Vibrio phage 1.233.B._10N.261.51.E6, partial genome	32566-32595	8	0.733
NZ_ALTI01000026_1	1.8\|44792\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	44792-44821	30	MN043730	Bacillus phage vB_BveM-Goe7, complete genome	133347-133376	8	0.733
NZ_ALTI01000026_1	1.10\|44924\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	44924-44953	30	NZ_CP040856	Lactobacillus johnsonii strain G2A plasmid unnamed2, complete sequence	11100-11129	8	0.733
NZ_ALTI01000026_1	1.11\|44990\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	44990-45019	30	JX409895	Streptococcus phage JX01, complete genome	43007-43028	8	0.733
NZ_ALTI01000026_1	1.12\|45056\|30\|NZ_ALTI01000026\|CRT,PILER-CR,CRISPRCasFinder	45056-45085	30	NZ_CP043858	Arcobacter cibarius strain H743 plasmid pACIB, complete sequence	142519-142548	10	0.667

1. spacer 1.4|44529|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to MK448970 (Streptococcus phage Javan516, complete genome) position: , mismatch: 0, identity: 1.0

aatggaattatcacaagcggggcatatggt	CRISPR spacer
aatggaattatcacaagcggggcatatggt	Protospacer
******************************

2. spacer 1.4|44529|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to MK448953 (Streptococcus phage Javan474, complete genome) position: , mismatch: 0, identity: 1.0

aatggaattatcacaagcggggcatatggt	CRISPR spacer
aatggaattatcacaagcggggcatatggt	Protospacer
******************************

3. spacer 1.4|44529|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to MK448945 (Streptococcus phage Javan454, complete genome) position: , mismatch: 0, identity: 1.0

aatggaattatcacaagcggggcatatggt	CRISPR spacer
aatggaattatcacaagcggggcatatggt	Protospacer
******************************

4. spacer 1.4|44529|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to MK448941 (Streptococcus phage Javan446, complete genome) position: , mismatch: 0, identity: 1.0

aatggaattatcacaagcggggcatatggt	CRISPR spacer
aatggaattatcacaagcggggcatatggt	Protospacer
******************************

5. spacer 1.4|44529|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to MK448957 (Streptococcus phage Javan484, complete genome) position: , mismatch: 0, identity: 1.0

aatggaattatcacaagcggggcatatggt	CRISPR spacer
aatggaattatcacaagcggggcatatggt	Protospacer
******************************

6. spacer 1.7|44726|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to MK448742 (Streptococcus phage Javan37, complete genome) position: , mismatch: 0, identity: 1.0

atcgggtctatatgccccctaaaatcaatt	CRISPR spacer
atcgggtctatatgccccctaaaatcaatt	Protospacer
******************************

7. spacer 1.10|44924|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to JX409894 (Streptococcus phage LYGO9, complete genome) position: , mismatch: 0, identity: 1.0

tcattacttgtatttataaatgatttagca	CRISPR spacer
tcattacttgtatttataaatgatttagca	Protospacer
******************************

8. spacer 1.10|44924|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to MH853356 (Streptococcus phage LF2, partial genome) position: , mismatch: 0, identity: 1.0

tcattacttgtatttataaatgatttagca	CRISPR spacer
tcattacttgtatttataaatgatttagca	Protospacer
******************************

9. spacer 1.10|44924|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to MK448837 (Streptococcus phage Javan10, complete genome) position: , mismatch: 0, identity: 1.0

tcattacttgtatttataaatgatttagca	CRISPR spacer
tcattacttgtatttataaatgatttagca	Protospacer
******************************

10. spacer 1.10|44924|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to MK448742 (Streptococcus phage Javan37, complete genome) position: , mismatch: 0, identity: 1.0

tcattacttgtatttataaatgatttagca	CRISPR spacer
tcattacttgtatttataaatgatttagca	Protospacer
******************************

11. spacer 1.10|44924|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to MK448851 (Streptococcus phage Javan14, complete genome) position: , mismatch: 0, identity: 1.0

tcattacttgtatttataaatgatttagca	CRISPR spacer
tcattacttgtatttataaatgatttagca	Protospacer
******************************

12. spacer 1.11|44990|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to JX409894 (Streptococcus phage LYGO9, complete genome) position: , mismatch: 0, identity: 1.0

atagacccatcacgaatcgaacgtgattaa	CRISPR spacer
atagacccatcacgaatcgaacgtgattaa	Protospacer
******************************

13. spacer 1.11|44990|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to MK448971 (Streptococcus phage Javan52, complete genome) position: , mismatch: 0, identity: 1.0

atagacccatcacgaatcgaacgtgattaa	CRISPR spacer
atagacccatcacgaatcgaacgtgattaa	Protospacer
******************************

14. spacer 1.11|44990|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to MK448829 (Streptococcus phage Javan7, complete genome) position: , mismatch: 0, identity: 1.0

atagacccatcacgaatcgaacgtgattaa	CRISPR spacer
atagacccatcacgaatcgaacgtgattaa	Protospacer
******************************

15. spacer 1.11|44990|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to MK448736 (Streptococcus phage Javan35, complete genome) position: , mismatch: 0, identity: 1.0

atagacccatcacgaatcgaacgtgattaa	CRISPR spacer
atagacccatcacgaatcgaacgtgattaa	Protospacer
******************************

16. spacer 1.11|44990|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to MK448956 (Streptococcus phage Javan48, complete genome) position: , mismatch: 0, identity: 1.0

atagacccatcacgaatcgaacgtgattaa	CRISPR spacer
atagacccatcacgaatcgaacgtgattaa	Protospacer
******************************

17. spacer 1.11|44990|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to MK448781 (Streptococcus phage Javan5, complete genome) position: , mismatch: 0, identity: 1.0

atagacccatcacgaatcgaacgtgattaa	CRISPR spacer
atagacccatcacgaatcgaacgtgattaa	Protospacer
******************************

18. spacer 1.11|44990|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to MK448749 (Streptococcus phage Javan39, complete genome) position: , mismatch: 0, identity: 1.0

atagacccatcacgaatcgaacgtgattaa	CRISPR spacer
atagacccatcacgaatcgaacgtgattaa	Protospacer
******************************

19. spacer 1.11|44990|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to MH853355 (Streptococcus phage LF1, complete genome) position: , mismatch: 0, identity: 1.0

atagacccatcacgaatcgaacgtgattaa	CRISPR spacer
atagacccatcacgaatcgaacgtgattaa	Protospacer
******************************

20. spacer 1.11|44990|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to MK448938 (Streptococcus phage Javan44, complete genome) position: , mismatch: 0, identity: 1.0

atagacccatcacgaatcgaacgtgattaa	CRISPR spacer
atagacccatcacgaatcgaacgtgattaa	Protospacer
******************************

21. spacer 1.11|44990|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to MH853356 (Streptococcus phage LF2, partial genome) position: , mismatch: 0, identity: 1.0

atagacccatcacgaatcgaacgtgattaa	CRISPR spacer
atagacccatcacgaatcgaacgtgattaa	Protospacer
******************************

22. spacer 1.11|44990|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to MK448911 (Streptococcus phage Javan34, complete genome) position: , mismatch: 0, identity: 1.0

atagacccatcacgaatcgaacgtgattaa	CRISPR spacer
atagacccatcacgaatcgaacgtgattaa	Protospacer
******************************

23. spacer 1.11|44990|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to MK448837 (Streptococcus phage Javan10, complete genome) position: , mismatch: 0, identity: 1.0

atagacccatcacgaatcgaacgtgattaa	CRISPR spacer
atagacccatcacgaatcgaacgtgattaa	Protospacer
******************************

24. spacer 1.11|44990|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to MK448742 (Streptococcus phage Javan37, complete genome) position: , mismatch: 0, identity: 1.0

atagacccatcacgaatcgaacgtgattaa	CRISPR spacer
atagacccatcacgaatcgaacgtgattaa	Protospacer
******************************

25. spacer 1.11|44990|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to MH853358 (Streptococcus phage LF4, complete genome) position: , mismatch: 0, identity: 1.0

atagacccatcacgaatcgaacgtgattaa	CRISPR spacer
atagacccatcacgaatcgaacgtgattaa	Protospacer
******************************

26. spacer 1.11|44990|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to MK448851 (Streptococcus phage Javan14, complete genome) position: , mismatch: 0, identity: 1.0

atagacccatcacgaatcgaacgtgattaa	CRISPR spacer
atagacccatcacgaatcgaacgtgattaa	Protospacer
******************************

27. spacer 1.11|44990|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to MK448916 (Streptococcus phage Javan36, complete genome) position: , mismatch: 0, identity: 1.0

atagacccatcacgaatcgaacgtgattaa	CRISPR spacer
atagacccatcacgaatcgaacgtgattaa	Protospacer
******************************

28. spacer 1.11|44990|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to MK448673 (Streptococcus phage Javan119, complete genome) position: , mismatch: 0, identity: 1.0

atagacccatcacgaatcgaacgtgattaa	CRISPR spacer
atagacccatcacgaatcgaacgtgattaa	Protospacer
******************************

29. spacer 1.4|44529|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to MK448829 (Streptococcus phage Javan7, complete genome) position: , mismatch: 1, identity: 0.967

aatggaattatcacaagcggggcatatggt	CRISPR spacer
aatggaattatcacaagcggggtatatggt	Protospacer
**********************.*******

30. spacer 1.4|44529|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to MH853355 (Streptococcus phage LF1, complete genome) position: , mismatch: 1, identity: 0.967

aatggaattatcacaagcggggcatatggt	CRISPR spacer
aatggaattatcacaagcggggtatatggt	Protospacer
**********************.*******

31. spacer 1.4|44529|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to MH853358 (Streptococcus phage LF4, complete genome) position: , mismatch: 1, identity: 0.967

aatggaattatcacaagcggggcatatggt	CRISPR spacer
aatggaattatcacaagcggggtatatggt	Protospacer
**********************.*******

32. spacer 1.5|44595|29|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to JX409894 (Streptococcus phage LYGO9, complete genome) position: , mismatch: 1, identity: 0.966

agagcggtcagcatgttgtgcaacgctgg	CRISPR spacer
agagcggtcagcatgttgtgcaacactgg	Protospacer
************************.****

33. spacer 1.5|44595|29|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to JX409895 (Streptococcus phage JX01, complete genome) position: , mismatch: 1, identity: 0.966

agagcggtcagcatgttgtgcaacgctgg	CRISPR spacer
agagcggtcagcatgttgtgcaacactgg	Protospacer
************************.****

34. spacer 1.7|44726|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to MK448837 (Streptococcus phage Javan10, complete genome) position: , mismatch: 1, identity: 0.967

atcgggtctatatgccccctaaaatcaatt	CRISPR spacer
atcgggtctatatgcctcctaaaatcaatt	Protospacer
****************.*************

35. spacer 1.10|44924|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to MK449010 (Streptococcus phage Javan90, complete genome) position: , mismatch: 1, identity: 0.967

tcattacttgtatttataaatgatttagca	CRISPR spacer
tcattacttgtatttataaataatttagca	Protospacer
*********************.********

36. spacer 1.10|44924|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to MK448833 (Streptococcus phage Javan87, complete genome) position: , mismatch: 1, identity: 0.967

tcattacttgtatttataaatgatttagca	CRISPR spacer
tcattacttgtatttataaataatttagca	Protospacer
*********************.********

37. spacer 1.11|44990|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to MK448796 (Streptococcus phage Javan53, complete genome) position: , mismatch: 1, identity: 0.967

atagacccatcacgaatcgaacgtgattaa	CRISPR spacer
atagacccatcacgaatcgaacgtgattga	Protospacer
****************************.*

38. spacer 1.11|44990|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to MK448859 (Streptococcus phage Javan170, complete genome) position: , mismatch: 1, identity: 0.967

atagacccatcacgaatcgaacgtgattaa	CRISPR spacer
atagacccatcacgaatcgaacgcgattaa	Protospacer
***********************.******

39. spacer 1.11|44990|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to MK448672 (Streptococcus phage Javan117, complete genome) position: , mismatch: 1, identity: 0.967

atagacccatcacgaatcgaacgtgattaa	CRISPR spacer
atagacccatcacgaatcgaacgcgattaa	Protospacer
***********************.******

40. spacer 1.11|44990|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to MK448686 (Streptococcus phage Javan157, complete genome) position: , mismatch: 1, identity: 0.967

atagacccatcacgaatcgaacgtgattaa	CRISPR spacer
atagacccatcacgaatcgaacgcgattaa	Protospacer
***********************.******

41. spacer 1.11|44990|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to MK448854 (Streptococcus phage Javan146, complete genome) position: , mismatch: 1, identity: 0.967

atagacccatcacgaatcgaacgtgattaa	CRISPR spacer
atagacccatcacgaatcgaacgcgattaa	Protospacer
***********************.******

42. spacer 1.11|44990|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to MK448676 (Streptococcus phage Javan131, complete genome) position: , mismatch: 1, identity: 0.967

atagacccatcacgaatcgaacgtgattaa	CRISPR spacer
atagacccatcacgaatcgaacgcgattaa	Protospacer
***********************.******

43. spacer 1.11|44990|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to MK448688 (Streptococcus phage Javan161, complete genome) position: , mismatch: 1, identity: 0.967

atagacccatcacgaatcgaacgtgattaa	CRISPR spacer
atagacccatcacgaatcgaacgcgattaa	Protospacer
***********************.******

44. spacer 1.12|45056|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to MN270279 (Streptococcus phage phi-SsuZKB4_rum, complete genome) position: , mismatch: 1, identity: 0.967

atcgagctttcactttgtttaacatggctt	CRISPR spacer
atcgagctttcactttatttaacatggctt	Protospacer
****************.*************

45. spacer 1.12|45056|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to MN270258 (Streptococcus phage phi-SgaBSJ27_rum, complete genome) position: , mismatch: 1, identity: 0.967

atcgagctttcactttgtttaacatggctt	CRISPR spacer
atcgagctttcactttatttaacatggctt	Protospacer
****************.*************

46. spacer 1.12|45056|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to MN270259 (Streptococcus phage phi-SgaBSJ31_rum, complete genome) position: , mismatch: 1, identity: 0.967

atcgagctttcactttgtttaacatggctt	CRISPR spacer
atcgagctttcactttatttaacatggctt	Protospacer
****************.*************

47. spacer 1.7|44726|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to MK448829 (Streptococcus phage Javan7, complete genome) position: , mismatch: 2, identity: 0.933

atcgggtctatatgccccctaaaatcaatt	CRISPR spacer
atagggtctatatgccccttaaaatcaatt	Protospacer
** ***************.***********

48. spacer 1.7|44726|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to MK448736 (Streptococcus phage Javan35, complete genome) position: , mismatch: 2, identity: 0.933

atcgggtctatatgccccctaaaatcaatt	CRISPR spacer
atagggtctatatgccccttaaaatcaatt	Protospacer
** ***************.***********

49. spacer 1.7|44726|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to MK448781 (Streptococcus phage Javan5, complete genome) position: , mismatch: 2, identity: 0.933

atcgggtctatatgccccctaaaatcaatt	CRISPR spacer
atagggtctatatgccccttaaaatcaatt	Protospacer
** ***************.***********

50. spacer 1.7|44726|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to MH853355 (Streptococcus phage LF1, complete genome) position: , mismatch: 2, identity: 0.933

atcgggtctatatgccccctaaaatcaatt	CRISPR spacer
atagggtctatatgccccttaaaatcaatt	Protospacer
** ***************.***********

51. spacer 1.7|44726|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to MK448938 (Streptococcus phage Javan44, complete genome) position: , mismatch: 2, identity: 0.933

atcgggtctatatgccccctaaaatcaatt	CRISPR spacer
atagggtctatatgccccttaaaatcaatt	Protospacer
** ***************.***********

52. spacer 1.7|44726|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to MK448911 (Streptococcus phage Javan34, complete genome) position: , mismatch: 2, identity: 0.933

atcgggtctatatgccccctaaaatcaatt	CRISPR spacer
atagggtctatatgccccttaaaatcaatt	Protospacer
** ***************.***********

53. spacer 1.7|44726|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to MH853358 (Streptococcus phage LF4, complete genome) position: , mismatch: 2, identity: 0.933

atcgggtctatatgccccctaaaatcaatt	CRISPR spacer
atagggtctatatgccccttaaaatcaatt	Protospacer
** ***************.***********

54. spacer 1.7|44726|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to MK448916 (Streptococcus phage Javan36, complete genome) position: , mismatch: 2, identity: 0.933

atcgggtctatatgccccctaaaatcaatt	CRISPR spacer
atagggtctatatgccccttaaaatcaatt	Protospacer
** ***************.***********

55. spacer 1.7|44726|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to MK448755 (Streptococcus phage Javan423, complete genome) position: , mismatch: 3, identity: 0.9

atcgggtctatatgccccctaaaatcaatt	CRISPR spacer
gctgggtctatatgccccctaaaatcaatt	Protospacer
...***************************

56. spacer 1.7|44726|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to MK448756 (Streptococcus phage Javan425, complete genome) position: , mismatch: 3, identity: 0.9

atcgggtctatatgccccctaaaatcaatt	CRISPR spacer
gctgggtctatatgccccctaaaatcaatt	Protospacer
...***************************

57. spacer 1.4|44529|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to MK448858 (Streptococcus phage Javan166, complete genome) position: , mismatch: 5, identity: 0.833

aatggaattatcacaagcggggcatatggt	CRISPR spacer
tgttggattatcacaagcgggccatatggt	Protospacer
 .* *.*************** ********

58. spacer 1.4|44529|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to MK448975 (Streptococcus phage Javan526, complete genome) position: , mismatch: 5, identity: 0.833

aatggaattatcacaagcggggcatatggt	CRISPR spacer
tgttggattatcacaagcgggccatatggt	Protospacer
 .* *.*************** ********

59. spacer 1.4|44529|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to MK448782 (Streptococcus phage Javan501, complete genome) position: , mismatch: 5, identity: 0.833

aatggaattatcacaagcggggcatatggt	CRISPR spacer
tgttggattatcacaagcgggccatatggt	Protospacer
 .* *.*************** ********

60. spacer 1.3|44463|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP015352 (Bacillus thuringiensis strain MYBT18246 plasmid p142098, complete sequence) position: , mismatch: 6, identity: 0.8

tcaaaatatcacacataaatcatcctcctt	CRISPR spacer
acaaaataacacacataattcatcaccatt	Protospacer
 ******* ********* ***** .* **

61. spacer 1.10|44924|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to NZ_KM521836 (Staphylococcus epidermidis strain 12-00322 plasmid p12-00322, complete sequence) position: , mismatch: 6, identity: 0.8

tcattacttgtatttataaatgatttagca	CRISPR spacer
tcattaatggtatttataaatgaatcatcg	Protospacer
****** * ************** *.* *.

62. spacer 1.10|44924|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to CP030483 (Staphylococcus aureus strain ER03913.3 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.8

tcattacttgtatttataaatgatttagca	CRISPR spacer
tcattaatggtatttataaatgaatcatcg	Protospacer
****** * ************** *.* *.

63. spacer 1.10|44924|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to NZ_LR214986 (Mycoplasma cynos strain NCTC10142 plasmid 13) position: , mismatch: 6, identity: 0.8

tcattacttgtatttataaatgatttagca	CRISPR spacer
tcattatttttatttataaatgaaatatta	Protospacer
******.** *************  ** .*

64. spacer 1.3|44463|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to MH491968 (Escherichia phage LL5, complete genome) position: , mismatch: 7, identity: 0.767

tcaaaatatcacacataaatcatcctcctt	CRISPR spacer
acaaaatctcacacatcaatcatcacccga	Protospacer
 ****** ******** ******* .**

65. spacer 1.6|44660|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to MG592576 (Vibrio phage 1.206.O._10N.222.51.B10, partial genome) position: , mismatch: 7, identity: 0.767

agactgcttgcgctttggtggattgtatgt	CRISPR spacer
cacctgctggcgctttggtggattctaatt	Protospacer
 . ***** *************** **  *

66. spacer 1.6|44660|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to MG592457 (Vibrio phage 1.082.O._10N.261.49.E4, partial genome) position: , mismatch: 7, identity: 0.767

agactgcttgcgctttggtggattgtatgt	CRISPR spacer
cacctgctggcgctttggtggattctaatt	Protospacer
 . ***** *************** **  *

67. spacer 1.6|44660|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to MG592593 (Vibrio phage 1.226.O._10N.261.48.E5, partial genome) position: , mismatch: 7, identity: 0.767

agactgcttgcgctttggtggattgtatgt	CRISPR spacer
cacctgctggcgctttggtggattctaatt	Protospacer
 . ***** *************** **  *

68. spacer 1.6|44660|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to MG592605 (Vibrio phage 1.239.O._10N.261.52.F6, partial genome) position: , mismatch: 7, identity: 0.767

agactgcttgcgctttggtggattgtatgt	CRISPR spacer
cacctgctggcgctttggtggattctaatt	Protospacer
 . ***** *************** **  *

69. spacer 1.6|44660|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to MG592631 (Vibrio phage 1.266.O._10N.286.52.F9, partial genome) position: , mismatch: 7, identity: 0.767

agactgcttgcgctttggtggattgtatgt	CRISPR spacer
cacctgctggcgctttggtggattctaatt	Protospacer
 . ***** *************** **  *

70. spacer 1.6|44660|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to AP018321 (Nostoc sp. HK-01 plasmid plasmid3 DNA, complete genome) position: , mismatch: 7, identity: 0.767

agactgcttgcgctttggtggattgtatgt	CRISPR spacer
ccaatgcttgcgctttggtgtattctagtt	Protospacer
  * **************** *** **  *

71. spacer 1.10|44924|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP032752 (Lactobacillus plantarum subsp. argentoratensis strain DSM 16365 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

tcattacttgtatttataaatgatttagca	CRISPR spacer
tatatctttgtatttagaaatgatttagcc	Protospacer
*   * .********* ************

72. spacer 1.10|44924|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP035135 (Lactobacillus plantarum strain SRCM103311 plasmid unnamed4) position: , mismatch: 7, identity: 0.767

tcattacttgtatttataaatgatttagca	CRISPR spacer
tatatttttgtatttagaaatgatttagcc	Protospacer
*   * .********* ************

73. spacer 1.10|44924|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to MN693208 (Marine virus AFVG_25M383, complete genome) position: , mismatch: 7, identity: 0.767

tcattacttgtatttataaatgatttagca	CRISPR spacer
gaagcatttgaattaataaatgatttagca	Protospacer
  * .*.*** *** ***************

74. spacer 1.10|44924|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to MN101223 (Klebsiella phage KOX10, complete genome) position: , mismatch: 7, identity: 0.767

tcattacttgtatttataaatgatttagca	CRISPR spacer
ttagatcttgaatttataaatgatttatga	Protospacer
*.*   **** ****************  *

75. spacer 1.10|44924|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to MN693725 (Marine virus AFVG_250M494, complete genome) position: , mismatch: 7, identity: 0.767

tcattacttgtatttataaatgatttagca	CRISPR spacer
tctgccattgtatttataaatgctttacca	Protospacer
**  .  *************** **** **

76. spacer 1.10|44924|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to MN101224 (Klebsiella phage KOX11, complete genome) position: , mismatch: 7, identity: 0.767

tcattacttgtatttataaatgatttagca	CRISPR spacer
ttagatcttgaatttataaatgatttatga	Protospacer
*.*   **** ****************  *

77. spacer 1.10|44924|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to KT001919 (Klebsiella phage Miro, complete genome) position: , mismatch: 7, identity: 0.767

tcattacttgtatttataaatgatttagca	CRISPR spacer
ttagatcttgaatttataaatgatttatga	Protospacer
*.*   **** ****************  *

78. spacer 1.10|44924|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to HQ918180 (Klebsiella phage KP27, complete genome) position: , mismatch: 7, identity: 0.767

tcattacttgtatttataaatgatttagca	CRISPR spacer
ttagatcttgaatttataaatgatttatga	Protospacer
*.*   **** ****************  *

79. spacer 1.10|44924|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to KT001918 (Klebsiella phage Matisse, complete genome) position: , mismatch: 7, identity: 0.767

tcattacttgtatttataaatgatttagca	CRISPR spacer
ttagatcttgaatttataaatgatttatga	Protospacer
*.*   **** ****************  *

80. spacer 1.10|44924|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to LT607758 (Klebsiella phage PMBT1 genome assembly, complete genome: monopartite) position: , mismatch: 7, identity: 0.767

tcattacttgtatttataaatgatttagca	CRISPR spacer
ttagatcttgaatttataaatgatttatga	Protospacer
*.*   **** ****************  *

81. spacer 1.10|44924|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to KX130727 (Escherichia phage phT4A, partial genome) position: , mismatch: 7, identity: 0.767

tcattacttgtatttataaatgatttagca	CRISPR spacer
ttagatcttgaatttataaatgatttatga	Protospacer
*.*   **** ****************  *

82. spacer 1.10|44924|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to KT321315 (Enterobacter phage phiEap-3, complete genome) position: , mismatch: 7, identity: 0.767

tcattacttgtatttataaatgatttagca	CRISPR spacer
ttagatcttgaatttataaatgatttatga	Protospacer
*.*   **** ****************  *

83. spacer 1.10|44924|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to MN101221 (Klebsiella phage KOX8, complete genome) position: , mismatch: 7, identity: 0.767

tcattacttgtatttataaatgatttagca	CRISPR spacer
ttagatcttgaatttataaatgatttatga	Protospacer
*.*   **** ****************  *

84. spacer 1.10|44924|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to GU295964 (Klebsiella phage KP15, complete genome) position: , mismatch: 7, identity: 0.767

tcattacttgtatttataaatgatttagca	CRISPR spacer
ttagatcttgaatttataaatgatttatga	Protospacer
*.*   **** ****************  *

85. spacer 1.6|44660|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to MG592597 (Vibrio phage 1.233.A._10N.261.51.E6, partial genome) position: , mismatch: 8, identity: 0.733

agactgcttgcgctttggtggattgtatgt	CRISPR spacer
cacctgctggcgctttggtggattcaatta	Protospacer
 . ***** ***************  **

86. spacer 1.6|44660|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to MG592442 (Vibrio phage 1.064.O._10N.261.52.E2, partial genome) position: , mismatch: 8, identity: 0.733

agactgcttgcgctttggtggattgtatgt	CRISPR spacer
cacctgctggcgctttggtggattcaatta	Protospacer
 . ***** ***************  **

87. spacer 1.6|44660|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to MG592482 (Vibrio phage 1.108.O._10N.222.51.A4, partial genome) position: , mismatch: 8, identity: 0.733

agactgcttgcgctttggtggattgtatgt	CRISPR spacer
cacctgctggcgctttggtggattcaatta	Protospacer
 . ***** ***************  **

88. spacer 1.6|44660|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to MG592598 (Vibrio phage 1.233.B._10N.261.51.E6, partial genome) position: , mismatch: 8, identity: 0.733

agactgcttgcgctttggtggattgtatgt	CRISPR spacer
cacctgctggcgctttggtggattcaatta	Protospacer
 . ***** ***************  **

89. spacer 1.8|44792|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to MN043730 (Bacillus phage vB_BveM-Goe7, complete genome) position: , mismatch: 8, identity: 0.733

agtctaatcgcctattattatccagataaa---	CRISPR spacer
agtctaagcgcctattattat---agcatagtc	Protospacer
******* *************   ...* *

90. spacer 1.10|44924|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP040856 (Lactobacillus johnsonii strain G2A plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.733

tcattacttgtatttataaatgatttagca	CRISPR spacer
gttgcatttgtatttataaaggatttagcg	Protospacer
 .  .*.************* ********.

91. spacer 1.11|44990|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to JX409895 (Streptococcus phage JX01, complete genome) position: , mismatch: 8, identity: 0.733

atagacccatcacgaatcgaacgtgattaa	CRISPR spacer
atagacccatcacgaatcgaac--------	Protospacer
**********************

92. spacer 1.12|45056|30|NZ_ALTI01000026|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP043858 (Arcobacter cibarius strain H743 plasmid pACIB, complete sequence) position: , mismatch: 10, identity: 0.667

atcgagctttcactttgtttaacatggctt	CRISPR spacer
ccaaagttttcactttgtttaacatcataa	Protospacer
 . .**.****************** ..

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

150922 : 168445

Streptococcus_phage(100.0%)

integrase

attL 142347:142362|attR 175110:175125

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
142347:142362	attL	NA	NA	NA	NA
WP_000420682.1\|150922_151237_+	YdcP family protein	A0A1S5SF38	Streptococcus_phage	5.2e-54	100.0
WP_000985015.1\|151252_151639_+	YdcP family protein	A0A1S5SF96	Streptococcus_phage	3.0e-64	100.0
WP_000813488.1\|151667_153053_+	DNA translocase FtsK	A0A1S5SFB5	Streptococcus_phage	1.1e-265	100.0
WP_000879507.1\|153055_153208_+	hypothetical protein	NA	NA	NA	NA
WP_000398284.1\|153230_154436_+	replication initiation factor domain-containing protein	A0A1S5SEX3	Streptococcus_phage	2.8e-233	100.0
WP_001009056.1\|154478_154700_+	hypothetical protein	A0A1S5SEY0	Streptococcus_phage	4.3e-31	100.0
WP_000342539.1\|154816_155314_+	antirestriction protein ArdA	A0A1S5SF25	Streptococcus_phage	1.7e-91	100.0
WP_000506270.1\|155288_155795_+	conjugal transfer protein	A0A1S5SEX7	Streptococcus_phage	8.6e-91	100.0
WP_000331160.1\|155778_158226_+	ATP-binding protein	A0A1S5SF64	Streptococcus_phage	0.0e+00	100.0
WP_000804748.1\|158228_160406_+	membrane protein	A0A1S5SF30	Streptococcus_phage	0.0e+00	100.0
WP_000769868.1\|160402_161404_+	lysozyme family protein	A0A1S5SEZ8	Streptococcus_phage	5.0e-191	100.0
WP_001224319.1\|161400_162333_+	conjugal transfer protein	A0A1S5SF22	Streptococcus_phage	1.1e-171	100.0
WP_001791010.1\|162577_162694_+	tetracycline resistance determinant leader peptide	NA	NA	NA	NA
WP_000691727.1\|162709_164629_+	tetracycline resistance ribosomal protection protein Tet(M)	A0A1S5SF82	Streptococcus_phage	0.0e+00	100.0
WP_000336323.1\|164747_164915_+	cysteine-rich KTR domain-containing protein	D0R0F6	Streptococcus_phage	1.6e-14	68.0
WP_001227347.1\|164974_165328_-	helix-turn-helix domain-containing protein	A0A1S5SFA6	Streptococcus_phage	1.3e-58	100.0
WP_000804885.1\|165832_166255_+	sigma-70 family RNA polymerase sigma factor	A0A1S5SEW0	Streptococcus_phage	2.5e-72	100.0
WP_000857133.1\|166251_166482_+	helix-turn-helix domain-containing protein	A0A1S5SEX1	Streptococcus_phage	2.7e-36	100.0
WP_000814511.1\|166942_167146_+	excisionase	A0A1S5SF07	Streptococcus_phage	4.0e-31	100.0
WP_001291561.1\|167227_168445_+\|integrase	tyrosine-type recombinase/integrase	A0A1S5SEW7	Streptococcus_phage	3.7e-233	100.0
175110:175125	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

8. NZ_ALTI01000015

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

39890 : 47064

Streptococcus_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000706196.1\|39890_41135_+	insulinase family protein	A0A1X9I714	Streptococcus_phage	1.1e-86	41.3
WP_000217762.1\|41136_42420_+	insulinase family protein	A0A2K9V7S4	Bandra_megavirus	1.6e-21	33.3
WP_000239225.1\|42542_43085_+	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA
WP_000181758.1\|43084_43924_+	energy-coupling factor transporter ATPase	G9BWD6	Planktothrix_phage	3.5e-20	30.0
WP_000510605.1\|43899_44742_+	energy-coupling factor transporter ATPase	W6JKT0	Anomala_cuprea_entomopoxvirus	1.5e-18	25.8
WP_000359358.1\|44734_45529_+	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA
WP_000029069.1\|45744_46284_+	LysM peptidoglycan-binding domain-containing protein	A0A249XZV3	Enterococcus_phage	1.3e-17	46.4
WP_001042665.1\|46389_47064_+	transglycosylase SLT domain-containing protein	Q4Z8Z7	Staphylococcus_phage	8.9e-27	54.3

DBSCAN-SWA_2

66147 : 71191

Streptococcus_phage(85.71%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001100460.1\|66147_66420_+	hypothetical protein	A0A1X9I5U9	Streptococcus_phage	1.8e-18	56.8
WP_001029295.1\|66420_67278_+	primase C-terminal domain-containing protein	A0A1X9I6L2	Streptococcus_phage	3.0e-120	72.9
WP_000656430.1\|67289_68684_+	hypothetical protein	A0A1W6JQD6	Staphylococcus_phage	5.9e-49	38.4
WP_001069293.1\|68976_69234_+	hypothetical protein	NA	NA	NA	NA
WP_000694573.1\|69230_69404_+	hypothetical protein	A0A1X9I5U0	Streptococcus_phage	4.3e-10	56.1
WP_001258765.1\|69561_70119_+	hypothetical protein	A0A1X9I5U4	Streptococcus_phage	2.4e-30	59.8
WP_000891152.1\|70191_70680_+	hypothetical protein	A0A1X9I5V2	Streptococcus_phage	3.5e-49	59.3
WP_000038826.1\|70813_71191_+	DUF1492 domain-containing protein	J7KDQ1	Streptococcus_phage	2.8e-14	40.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

9. NZ_ALTI01000013

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

33861 : 43245

uncultured_Caudovirales_phage(28.57%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000120355.1\|33861_34563_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	9.2e-35	39.9
WP_000246611.1\|34699_36820_-	type I DNA topoisomerase	E3T4K4	Cafeteria_roenbergensis_virus	1.1e-102	37.7
WP_001015250.1\|36914_37757_-	DNA-protecting protein DprA	S6BFL3	Thermus_phage	8.5e-27	35.8
WP_000162771.1\|37895_38924_-	siderophore ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_000614752.1\|38985_39747_-	ATP-binding cassette domain-containing protein	Q9EMR9	Amsacta_moorei_entomopoxvirus	1.7e-18	28.6
WP_000588576.1\|39743_40718_-	iron chelate uptake ABC transporter family permease subunit	A0A2H4IY97	uncultured_Caudovirales_phage	3.6e-05	21.2
WP_000735588.1\|40714_41677_-	iron chelate uptake ABC transporter family permease subunit	A0A2H4IY97	uncultured_Caudovirales_phage	3.3e-83	50.3
WP_000136509.1\|41914_42463_-	sugar O-acetyltransferase	NA	NA	NA	NA
WP_000201088.1\|42483_43245_-	ribonuclease HII	D2TEQ2	Emiliania_huxleyi_virus	1.5e-25	40.7

DBSCAN-SWA_2

95746 : 104739

Bacillus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000222543.1\|95746_97465_+	phospho-sugar mutase	A0A1X9I671	Streptococcus_phage	1.8e-278	84.8
WP_000746858.1\|97488_97728_-	hypothetical protein	NA	NA	NA	NA
WP_000647638.1\|97741_99475_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	5.1e-50	31.0
WP_000826946.1\|99475_101197_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	2.8e-40	26.7
WP_000472259.1\|101208_101811_-	lysozyme family protein	A0A223LKM8	Bacillus_phage	1.1e-20	40.1
WP_000968655.1\|101812_102790_-	nucleoid-associated protein	NA	NA	NA	NA
WP_000575545.1\|102794_104051_-	serine hydroxymethyltransferase	A0A240F3L3	Aeromonas_phage	7.8e-93	51.7
WP_000998735.1\|104142_104739_-	threonylcarbamoyl-AMP synthase	A0A291ATS8	Pandoravirus	1.1e-15	29.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

10. NZ_ALTI01000027

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 49890

Streptococcus_phage(78.72%)

holin,portal,capsid,terminase,tRNA,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000257230.1\|0_1061_-	lysin	Q5MY96	Streptococcus_phage	6.0e-203	95.5
WP_000611525.1\|1190_1442_-\|holin	phage holin	J7KDR1	Streptococcus_phage	2.5e-35	95.2
WP_000215499.1\|1443_1746_-	hypothetical protein	X2KT07	Streptococcus_phage	2.2e-25	59.6
WP_000698337.1\|1758_1971_-	hypothetical protein	J7KDP6	Streptococcus_phage	2.1e-14	60.0
WP_000404431.1\|1945_2272_-	DUF1366 domain-containing protein	J7KDI9	Streptococcus_phage	1.3e-31	68.2
WP_000536261.1\|2285_4298_-	hypothetical protein	J7KC14	Streptococcus_phage	1.0e-174	52.4
WP_001904187.1\|4308_7110_-\|tail	phage tail protein	J7KJ56	Streptococcus_phage	4.1e-17	29.1
WP_001293183.1\|7109_8558_-\|tail	phage tail family protein	A0A1S5SE21	Streptococcus_phage	2.0e-63	31.9
WP_000763209.1\|8550_12207_-	tape measure protein	C5IUK3	Streptococcus_phage	1.9e-06	33.9
WP_000886304.1\|12227_12827_-	hypothetical protein	A0A286QMS7	Streptococcus_phage	5.6e-49	47.9
WP_000260296.1\|12828_13188_-	hypothetical protein	A0A286QNZ4	Streptococcus_phage	2.0e-25	52.5
WP_001125539.1\|13249_13705_-	hypothetical protein	A0A1S5SDE5	Streptococcus_phage	6.0e-35	51.0
WP_001062049.1\|13705_14107_-\|capsid	minor capsid protein	A0A2H4JHL9	uncultured_Caudovirales_phage	5.8e-42	62.7
WP_000537347.1\|14103_14466_-\|capsid	minor capsid protein	A0A286QMS1	Streptococcus_phage	1.1e-39	67.2
WP_000145709.1\|14465_14807_-	hypothetical protein	A0A286QMS6	Streptococcus_phage	1.8e-39	63.6
WP_000454437.1\|14793_15204_-	hypothetical protein	C5IUJ7	Streptococcus_phage	3.5e-34	57.7
WP_001051386.1\|15220_15421_-	hypothetical protein	NA	NA	NA	NA
WP_001085196.1\|15427_15628_-	hypothetical protein	NA	NA	NA	NA
WP_000261370.1\|15642_16467_-	hypothetical protein	A0A2H4JBI0	uncultured_Caudovirales_phage	6.4e-128	82.5
WP_000053998.1\|16496_17072_-	phage scaffolding protein	A0A2H4JBH4	uncultured_Caudovirales_phage	4.0e-60	67.9
WP_001042766.1\|17241_17535_-	hypothetical protein	A0A097PAR8	Streptococcus_pyogenes_phage	1.3e-30	79.5
WP_000877753.1\|17579_17861_-	hypothetical protein	NA	NA	NA	NA
WP_000752683.1\|17857_19507_-\|capsid	phage minor capsid protein	C5IUJ3	Streptococcus_phage	4.0e-153	71.4
WP_001879407.1\|19511_20972_-\|portal	phage portal protein	A0A286QNN2	Streptococcus_phage	3.8e-208	72.6
WP_000996292.1\|21035_22334_-\|terminase	PBSX family phage terminase large subunit	A0A286QNX6	Streptococcus_phage	8.2e-162	64.4
WP_000532150.1\|22302_23034_-	hypothetical protein	A0A2H4J4R0	uncultured_Caudovirales_phage	3.1e-25	31.8
WP_001030247.1\|23195_23612_-	DUF1492 domain-containing protein	A0A141E1Y4	Streptococcus_phage	7.3e-56	80.4
WP_000802908.1\|23686_23938_-	hypothetical protein	M1PFL8	Streptococcus_phage	1.2e-13	45.8
WP_000198707.1\|23950_24382_-	hypothetical protein	U6E9D1	Streptococcus_phage	8.7e-60	76.2
WP_001270750.1\|24383_24683_-	DUF1372 family protein	M1PL25	Streptococcus_phage	2.5e-26	69.7
WP_017644227.1\|24679_24832_-	hypothetical protein	NA	NA	NA	NA
WP_000221465.1\|24828_25230_-	hypothetical protein	Q708P3	Streptococcus_phage	1.7e-49	73.7
WP_000097130.1\|25239_25755_-	hypothetical protein	M1PFM2	Streptococcus_phage	1.2e-79	88.8
WP_000628877.1\|25751_26084_-	hypothetical protein	M1NS23	Streptococcus_phage	2.9e-39	72.5
WP_001285419.1\|26067_26874_-	hypothetical protein	U4KJA1	Streptococcus_phage	7.2e-116	75.8
WP_000609570.1\|26883_27375_-	single-stranded DNA-binding protein	M1PL31	Streptococcus_phage	1.7e-59	85.3
WP_000405931.1\|27480_27795_-	hypothetical protein	A0A1S5SA17	Streptococcus_phage	2.2e-36	64.1
WP_000043867.1\|27803_28073_-	hypothetical protein	M1Q1G3	Streptococcus_phage	3.1e-39	84.3
WP_001157042.1\|28075_29104_-	DUF1351 domain-containing protein	A0A141E243	Streptococcus_phage	8.3e-117	65.9
WP_000184013.1\|29113_29980_-	phage recombination protein Bet	A0A1S5SD57	Streptococcus_phage	2.9e-131	83.0
WP_001078550.1\|29976_30156_-	hypothetical protein	A0A1S5SAF4	Streptococcus_phage	2.3e-14	64.4
WP_000932823.1\|30301_30562_-	hypothetical protein	NA	NA	NA	NA
WP_000565642.1\|30561_30843_-	hypothetical protein	NA	NA	NA	NA
WP_001163840.1\|31084_31450_-	hypothetical protein	M1Q1T8	Streptococcus_phage	1.8e-50	76.0
WP_017644226.1\|31460_31637_-	hypothetical protein	A0A141E1D2	Streptococcus_phage	6.3e-09	55.2
WP_001004151.1\|31701_32430_-	phage antirepressor protein	A0A1S5S8Y6	Streptococcus_phage	1.4e-113	86.4
WP_000217789.1\|32442_32682_-	helix-turn-helix transcriptional regulator	A0A2H4J306	uncultured_Caudovirales_phage	4.0e-22	64.5
WP_001054314.1\|32833_33607_+	helix-turn-helix transcriptional regulator	A0A141E1D5	Streptococcus_phage	1.4e-79	61.0
WP_000734160.1\|33623_34151_+	hypothetical protein	A0A2H4J009	uncultured_Caudovirales_phage	2.7e-39	60.6
WP_000633502.1\|34274_35720_+	recombinase family protein	E8ZDY7	Streptococcus_phage	1.3e-200	70.7
WP_017285365.1\|35796_36888_-	type II secretion system F family protein	NA	NA	NA	NA
WP_000285373.1\|37877_38243_-	DUF1033 family protein	NA	NA	NA	NA
WP_000228729.1\|38356_42007_-	DNA-directed RNA polymerase subunit beta'	R4TQM7	Phaeocystis_globosa_virus	2.6e-64	25.1
WP_000907191.1\|42123_45699_-	DNA-directed RNA polymerase subunit beta	A0A1B1ISA9	uncultured_Mediterranean_phage	3.6e-50	24.5
WP_000472396.1\|46222_48520_-	penicillin-binding protein	NA	NA	NA	NA
WP_001019844.1\|48630_49890_+\|tRNA	tyrosine--tRNA ligase	A0A1S6UA79	Serratia_phage	4.0e-73	41.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage