CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_ALQT01000009	Streptococcus agalactiae CCUG 39096 A ctg120001038478, whole genome shotgun sequence	1 crisprs	NA	0	0	1	1
NZ_ALQT01000007	Streptococcus agalactiae CCUG 39096 A ctg120001038476, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALQT01000003	Streptococcus agalactiae CCUG 39096 A ctg120001038472, whole genome shotgun sequence	0 crisprs	NA	0	0	1	0
NZ_ALQT01000019	Streptococcus agalactiae CCUG 39096 A ctg120001038488, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALQT01000010	Streptococcus agalactiae CCUG 39096 A ctg120001038479, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALQT01000001	Streptococcus agalactiae CCUG 39096 A ctg120001038470, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALQT01000018	Streptococcus agalactiae CCUG 39096 A ctg120001038487, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALQT01000012	Streptococcus agalactiae CCUG 39096 A ctg120001038481, whole genome shotgun sequence	0 crisprs	NA	0	0	1	0
NZ_ALQT01000016	Streptococcus agalactiae CCUG 39096 A ctg120001038485, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALQT01000004	Streptococcus agalactiae CCUG 39096 A ctg120001038473, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALQT01000013	Streptococcus agalactiae CCUG 39096 A ctg120001038482, whole genome shotgun sequence	1 crisprs	DinG,cas2,cas1,cas4,cas7,cas8c,cas5,cas3	1	7	1	0
NZ_ALQT01000021	Streptococcus agalactiae CCUG 39096 A ctg120001038490, whole genome shotgun sequence	0 crisprs	DEDDh,WYL	0	0	0	0
NZ_ALQT01000002	Streptococcus agalactiae CCUG 39096 A ctg120001038471, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALQT01000008	Streptococcus agalactiae CCUG 39096 A ctg120001038477, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALQT01000014	Streptococcus agalactiae CCUG 39096 A ctg120001038483, whole genome shotgun sequence	0 crisprs	csm6	0	0	1	0
NZ_ALQT01000017	Streptococcus agalactiae CCUG 39096 A ctg120001038486, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALQT01000006	Streptococcus agalactiae CCUG 39096 A ctg120001038475, whole genome shotgun sequence	0 crisprs	cas3	0	0	0	0
NZ_ALQT01000011	Streptococcus agalactiae CCUG 39096 A ctg120001038480, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALQT01000015	Streptococcus agalactiae CCUG 39096 A ctg120001038484, whole genome shotgun sequence	1 crisprs	csn2,cas2,cas1,cas9	0	20	0	0
NZ_ALQT01000005	Streptococcus agalactiae CCUG 39096 A ctg120001038474, whole genome shotgun sequence	0 crisprs	csa3	0	0	2	0
NZ_ALQT01000020	Streptococcus agalactiae CCUG 39096 A ctg120001038489, whole genome shotgun sequence	0 crisprs	DEDDh	0	0	1	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_ALQT01000009_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_ALQT01000009_1

35061-35136

Orphan

Consensus_repeat	Method
TGATGTTAAACAAGTATCAGTTGCT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_ALQT01000009_1

>merge|NZ_ALQT01000009|1|35061-35136|CRISPRCasFinder
TGATGTTAAACAAGTATCAGTTGCTAAAGCAAGCGTGTTGCCAAGTACTGGTGATGTTAAACAAGTATCAGTTGCT

>NZ_ALQT01000009|1|1|35061-35136|CRISPRCasFinder
TGATGTTAAACAAGTATCAGTTGCT	AAAGCAAGCGTGTTGCCAAGTACTGG
TGATGTTAAACAAGTATCAGTTGCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_ALQT01000009.1\|WP_000159508.1\|17865_18213_+\|hypothetical-protein	unknown	unknown	unknown
NZ_ALQT01000009.1\|WP_000235568.1\|19014_19470_+\|hypothetical-protein	unknown	unknown	unknown
NZ_ALQT01000009.1\|WP_001042364.1\|35222_35933_+\|LPXTG-cell-wall-anchor-domain-containing-protein	unknown	unknown	gnl\|CDD\|223021
NZ_ALQT01000009.1\|WP_001154845.1\|38859_39327_+\|single-stranded-DNA-binding-protein	unknown	unknown	gnl\|CDD\|239942
NZ_ALQT01000009.1\|WP_001088027.1\|35999_38807_+\|LPXTG-cell-wall-anchor-domain-containing-protein	unknown	unknown	gnl\|CDD\|375647
NZ_ALQT01000009.1\|WP_001118910.1\|39567_39825_+\|hypothetical-protein	unknown	unknown	unknown
NZ_ALQT01000009.1\|WP_000389210.1\|29624_31457_+\|ATP-dependent-Clp-protease-ATP-binding-subunit	unknown	unknown	gnl\|CDD\|223616
NZ_ALQT01000009.1\|WP_000159131.1\|46203_47988_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|372641
NZ_ALQT01000009.1\|WP_000020265.1\|48099_49335_-\|DNA-cytosine-methyltransferase	unknown	unknown	gnl\|CDD\|223348
NZ_ALQT01000009.1\|WP_000490278.1\|39817_42814_+\|type-IV-secretory-system-conjugative-DNA-transfer-family-protein	unknown	unknown	gnl\|CDD\|378923
NZ_ALQT01000009.1\|WP_000796935.1\|22254_27696_+\|DUF3991-domain-containing-protein	unknown	unknown	gnl\|CDD\|376232
NZ_ALQT01000009.1\|WP_025194574.1\|19484_21851_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|375981
NZ_ALQT01000009.1\|WP_000768449.1\|42914_43394_+\|hypothetical-protein	unknown	unknown	unknown
NZ_ALQT01000009.1\|WP_025194577.1\|43511_45677_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237537
NZ_ALQT01000009.1\|WP_000843267.1\|31548_31896_+\|hypothetical-protein	unknown	unknown	unknown
NZ_ALQT01000009.1\|WP_000739637.1\|18212_19004_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372824
NZ_ALQT01000009.1\|WP_000259050.1\|27874_29623_+\|DNA-topoisomerase-III	unknown	unknown	gnl\|CDD\|236078
NZ_ALQT01000009.1\|WP_000938923.1\|21978_22236_+\|hypothetical-protein	unknown	unknown	unknown
NZ_ALQT01000009.1\|WP_000874144.1\|31905_32973_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|319758
NZ_ALQT01000009.1\|WP_032458248.1\|45682_45967_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|349379

Protein	Function_ID	Function_description	E-value
NZ_ALQT01000009.1\|WP_001042364.1\|35222_35933_+\|LPXTG-cell-wall-anchor-domain-containing-protein	gnl\|CDD\|223021	PHA03247, PHA03247, large tegument protein UL36; Provisional.	7.51946e-05
NZ_ALQT01000009.1\|WP_001154845.1\|38859_39327_+\|single-stranded-DNA-binding-protein	gnl\|CDD\|239942	cd04496, SSB_OBF, SSB_OBF: A subfamily of OB folds similar to the OB fold of ssDNA-binding protein (SSB). SSBs bind with high affinity to ssDNA. They bind to and protect ssDNA intermediates during DNA metabolic pathways. All bacterial and eukaryotic SSBs studied to date oligomerize to bring together four OB folds in their active state. The majority (e.g. Escherichia coli SSB) have a single OB fold per monomer, which oligomerize to form a homotetramer. However, Deinococcus and Thermus SSB proteins have two OB folds per monomer, which oligomerize to form a homodimer. Mycobacterium tuberculosis SSB varies in quaternary structure from E. coli SSB. It forms a dimer of dimers having a unique dimer interface, which lends the protein greater stability. Included in this group are OB folds similar to Escherichia coli PriB. E.coli PriB is homodimeric with each monomer having a single OB fold. It does not appear to form higher order oligomers. PriB is an essential protein for the replication restart at forks that have stalled at sites of DNA damage. It also plays a role in the assembly of primosome during replication initiation at the bacteriophage phiX174 origin. PriB physically interacts with SSB and binds ssDNA with high affinity.	2.7986e-13
NZ_ALQT01000009.1\|WP_001088027.1\|35999_38807_+\|LPXTG-cell-wall-anchor-domain-containing-protein	gnl\|CDD\|375647	pfam18220, BspA_v, Adhesin BspA variable domain. This domain is found in BspA protein present in Streptococcus agalactiae. BspA is an antigen I/II family polypeptide that confers adhesion linked to pathogenesis in group B Streptococcus. This domain is referred to as the variable domain (BspA-V). BspA-V is responsible for binding to scavenger receptor gp340. BspA-V adopts a fold that is distinct from those of other AgI/II family polypeptide variable domains.	3.6074e-85
NZ_ALQT01000009.1\|WP_025194577.1\|43511_45677_+\|hypothetical-protein	gnl\|CDD\|237537	PRK13875, PRK13875, conjugal transfer protein TrbL; Provisional.	0.00149119
NZ_ALQT01000009.1\|WP_000389210.1\|29624_31457_+\|ATP-dependent-Clp-protease-ATP-binding-subunit	gnl\|CDD\|223616	COG0542, clpA, ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones [Posttranslational modification, protein turnover, chaperones].	0
NZ_ALQT01000009.1\|WP_000159131.1\|46203_47988_+\|ATP-binding-protein	gnl\|CDD\|372641	pfam13589, HATPase_c_3, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. This family represents, additionally, the structurally related ATPase domains of histidine kinase, DNA gyrase B and HSP90.	2.13233e-19
NZ_ALQT01000009.1\|WP_032458248.1\|45682_45967_+\|hypothetical-protein	gnl\|CDD\|349379	cd17748, BRCT_DNA_ligase_like, BRCT domain of bacterial NAD-dependent DNA ligase (LigA) and similar proteins. LigA, also called NAD(+)-dependent polydeoxyribonucleotide synthase, catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA. The Trp-X-X-X-Cys/Ser signature motif of the BRCT family is not conserved in this family.	1.10551e-21
NZ_ALQT01000009.1\|WP_000796935.1\|22254_27696_+\|DUF3991-domain-containing-protein	gnl\|CDD\|376232	pfam18813, PBECR4, phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease4. A predicted endoRNase of the Barnase-EndoU-ColicinE5/D-RelE like nuclease fold found in polyvalent proteins of phages and conjugative elements. The predicted active site contains a conserved histidine residue.	1.511e-24
NZ_ALQT01000009.1\|WP_000490278.1\|39817_42814_+\|type-IV-secretory-system-conjugative-DNA-transfer-family-protein	gnl\|CDD\|378923	pfam12696, TraG-D_C, TraM recognition site of TraD and TraG. This family includes both TraG and TraD as well as VirD4 proteins. TraG is essential for DNA transfer in bacterial conjugation. These proteins are thought to mediate interactions between the DNA-processing (Dtr) and the mating pair formation (Mpf) systems. This domain interacts with the relaxosome component TraM via the latter's tetramerisation domain. TraD is a hexameric ring ATPase that forms the cytoplasmic face of the conjugative pore.	1.99688e-26
NZ_ALQT01000009.1\|WP_000020265.1\|48099_49335_-\|DNA-cytosine-methyltransferase	gnl\|CDD\|223348	COG0270, Dcm, Site-specific DNA methylase [DNA replication, recombination, and repair].	3.05975e-65
NZ_ALQT01000009.1\|WP_000739637.1\|18212_19004_+\|hypothetical-protein	gnl\|CDD\|372824	pfam13930, Endonuclea_NS_2, DNA/RNA non-specific endonuclease.	1.1527e-32
NZ_ALQT01000009.1\|WP_000259050.1\|27874_29623_+\|DNA-topoisomerase-III	gnl\|CDD\|236078	PRK07726, PRK07726, DNA topoisomerase 3.	5.88078e-119
NZ_ALQT01000009.1\|WP_000874144.1\|31905_32973_+\|hypothetical-protein	gnl\|CDD\|319758	cd16427, TraM-like, C-terminal domain of transfer protein TraM. This family contains the C-terminal domain of transfer protein TraM of the G+ broad host range Enterococcus conjugative plasmid pIP501 and similar proteins. The protein localizes to the cell envelope and is part of the plasmid transfer system that is accessible from outside of the cell. TraM displays a fold similar to the type IV secretion system (T4SS) VirB8 proteins from A. tumefaciens and B. suis (G-) and to the transfer protein TcpC from C. perfringens plasmid pCW3 (G+), reinforcing the prediction that TraM performs a key role in the secretion process, which is underlined by its surface accessibility. It is also structurally related to members of the nuclear transport factor-2 (NTF-2)-like superfamily with a high similarity to the NTF-2 protein from Rattus norvegicus. TraM (categorized as T4SS VirB8-like class GAMMA) does not possess the binding pocket of classic VirB8 class ALPHA proteins, recognized by VirB8 interaction inhibitors.	1.0817e-37
NZ_ALQT01000009.1\|WP_025194574.1\|19484_21851_+\|hypothetical-protein	gnl\|CDD\|375981	pfam18555, MobL, MobL relaxases. This family includes members of relaxase enzymes. These enzymes initiate bacterial conjugation contributing to the spread of antibiotic resistance. These MobL relaxases are found mainly in Firmicutes. It is suggested that MobL type relaxases play a prominent role in horizontal gene transfer in Firmicutes bacteria. Family members carry a stretch of relaxase motif III 'HUH' sequence that is characteristic of the HUH endonuclease superfamily essential for enzymatic activity.	2.27033e-80

>NZ_ALQT01000009.1|WP_000874144.1|31905_32973_+|hypothetical-protein
MAFIPFKKSNKCLVTDDLFVEITWEEGKSPEDDSELLGIIEGLDQQYLDVFQHPIEESLPYVTFRQAELLFQALQDAYGHLQLNKVAICHLEGKEAVSEGEVFASPFVIDTNYQNLLLPLIQAILTATEFMSYTYAEKREYFVNQIYPAYKTSVVIQESSLPLFPVEGEQVSSITPTQNQISNFPPSRTIAAQKAPKEPSLKKVYLLMGVLAILVVGGIISSVTQSSKQKERFTYLYQELKNTQQLVDKEHQIDTFSRYFLPNYYSGKKENLLDFLSSGDAKYTVPKKGILQSVILEKLTYNTKNKEYLATYILSVKKEGRTSNLRLSFNIKALVSSKYGYVVSTEPKEATFINE
>NZ_ALQT01000009.1|WP_000843267.1|31548_31896_+|hypothetical-protein
MKSTLTNFINTVKTKGKGYLLSLSLFLSGVLTNTAYAADPFAKTDALANQGITKVQGIGVVTLGLAVVVTGLVYGFGGREIKAAIKKHWLAIAISIIAVSAGPSIVEWGFNFVKG
>NZ_ALQT01000009.1|WP_000389210.1|29624_31457_+|ATP-dependent-Clp-protease-ATP-binding-subunit
MEDELKTPYLDQYTDNLSAKVAQKSDNYQVYGRDKEVQAVIISLLRRTKNNPILVGEAGVGKTAIVEGLTLAMLRDQVPEALKGLTVRSLELSSLMSEENGGFIAKFKKIIEEMVATRGHNLLFVDEFHTIVGAGGQDGQALDAGNVLKPVLARGDIQLIGATTLDEFHDYIETDRALERRMQPVMVEETTIPQAITIIDQAKMIYEKFHGIQISSEAVRQAVRLSVRYITDRFLPDKAFDLIDEASTIAATEGKATVTDEDIAQVLKDKTGIPVTTILKGDQDRLEGFKEKLMDRVKGQEAAIEAIVDAVTIAQAGLQDENKPISSFLFLGPTGVGKTELSKAVAEALFDDEDAMIRFDMSEFKKKEDVAKLIGNRETRTKGQLTEGVKRKPYSVLLLDEVEKAHSEVMDLFLQVLDDGRLTDSSGRLISFKNVIVIMTTNVGAKKIINKWELKGNFKDLTDRDRQQFEKSMDSELQNVFRPEFLNRIENKIIFNLLERNVIEEIAEKNLTKISARMKRQNLTLSYEPSLIQYLSDVGTDVKNGARPLERLIKRKVLAPISAKSLKLDKSKQTYNVHLLVTGEAPDNQHRKDLRQIQLDIEGEMESFFS
>NZ_ALQT01000009.1|WP_000259050.1|27874_29623_+|DNA-topoisomerase-III
MVTVILAEKESQAAAYAESLGLASKKGKVHIVKQTPYFSDEVHIIAAEGHLFEYGLPKDNWDLEKLPLVDVSFKQALKQDKVSKETFKQIYQEVTAADQVIIGTDSDREGERIAYSILSHIPEGKKKVTKRLWVNSMTIRALQKAFQHLRDSIETYNYYLEAEARAQSDWLVGMNLSPLVTLELQNKGRLPKGKGNSLSVGRVQTPGVRLICENDLAIQNFRTETYWKLQLQDKETEISFSNKEKYSDSELILATSRQLSPVSTVLSVEAEEKQRAAPALFNLSDIQAIAAKQWGFDSAKTEQIVESLYLKKYLSYPRTDIRFITEEEFDYLKTYIKSYQATISCHFEPVHLEPRENYVNPEKVAKTSHYALIPTENIPNLVTLKPDERFIYEAVVRRTLLMFAADCRYQTTTVDIENQGLVFKTRGRQMLDPGWTAFSQQKLKGDVELPDYRVGDQLETKTTILEGVTKPPKRMTESQFIGEILPKYGLGTQATRAAMLKTIQDRGYVTKDKKTGQLFPTNKAYLLIHYLYDNEFASPETTGGWELFLSQIGEGDINPREFVDAIKEKLTDQITAAKGRSD
>NZ_ALQT01000009.1|WP_000796935.1|22254_27696_+|DUF3991-domain-containing-protein
MAEEHTQQPTPRGKSRRERVEYARSRDILDVASELNMELVRSARDYRWKEHDSLVISPDKNMWNWFSRHQGGDVISLVETMKEVNFNQAIDYLNDGSFKEHTAVERVQEPFSYYLAPYEQPFDAARTYLKEQRGLSDETIDFFLDEGVLAQSNAKVNGSIEPVVVFKSFDFSGEIVGATLQGIEENWEKWPERGYAKNIVRNSDGITGLHVDIGQPNRLIFAESAIDLMSYYELHKDSLQDVRLVSMDGIKEPVIGRHLAQLQSDISGRPLRWSYEQLAEGLQTAIDNNFFAGGKHADWITLAVDNDLAGRTFIDSLREKGATINEDLPDLQLGQDKTDWNDALKSSLSNQISKIDQPEKVEDYQIRVDALIADITQDDTAYYLWHDEELHNLGAEDTILEEFHGMLEDRKYPIAGAELYVEDSSNDGATGYLSLEGYVLDRDGILDYLSDQEFSNLEKVEFLTKLQTNLPEIWEKVLDHYEDTFKVVVDKYELKSSDTPLIQNNDTESLASEPKIVTYDFVKQENEELVKQLEDRLKAGEIAITFDTDIYLSDIFGNLGNSHPLKYMTDKRLEVLAPLRPILSSIDDKTVDLYKNKGTVEQDSLYQALKPHQRTLGVDISTRFIGELAIAAYSTNKQLESLSAEQFGAYYGTRTFDNLSQSIERMLEYPLNEAGIKDYTYGFVTTPNSFYHYLMEQEGEVVLSRTDVEMLMSRIESQSYRIVESTQEEVAVSEEKEKSLEMNQETNTGGELFNRNSSFLGEDSPGTAPQPVEPEAQPIFPTNVHLYFTTDDGNMSNKAFRKNLRTLNLYANTMRDSAQWYLSEVADTTMRYIYKTPQEDGLQVLSVHLGKKNWMHLTGVTPVYENWVDSLSEQFIDDIANSKGHFKNLKFALGTPDKLKVLNLLPEIIESDTFVFNDLSSVKKLNNLDLSQALNPEDSDLLLLFRDEGVHQVPASLMRIKGELKEKMSDIDSGTVLGVYRERDGQLEQISINEEYVKDGGQEMLSILENKQYEEAIDVSQEKIQTDVISAEQFTQVLDAVYNVGVPENFERIPEEFHPAWNQYFSYAEAYEGDLRKIIAAADSDQLLDKTSDLYQEWHQDQIYQNDYHVRLQWTEQWPEGPQIPFKETELVDYQTFAEVLYKENKAFYEHHQGSIAEVNATGNQEAYIPFTKLKFDIYAPGGTLIKSDVRYDVGDETEPISQLLGLGYRRLVGQPELAAIDEKILSQLENQEVNQAIAAEANEQSFNSNELPPEEDYPRGSFYSPNQEIKTNLAQRVEEIMAEDKTKMLVASVPHIQENLSVEGNLVGTPQSNGRMLYINREDFGQDYQLELAVHSPKTIDFLEDVQAPWTLALMRGEEKLGYLAYGSDWGNDFQIQEELERVAEQIGVGKASERLYYQEEVDTFLASNQEKESSKEQQPPTISAEPFDYMNASAYDISEHAFQKIREYTQSPEELMEYMEFMSKFPQLSTRNVALIKDQWRGANAVATYDQWKSMGEALGIKPEDVIQTKATYTNKRTGETKEVVHQGLSVKTGEKSRITLFRPLMVRMIPVVDENGNHVKNDKGNPKYKKLSEATPQEKALVKDGKLPVRQFQERDPKTGYPRFTTYKVFELSQTMLKPESYPKAMPNRHYNFNVDKVKTKEVLEGLCDYAESSGITMMKDEAHVLGNAKGAFYPEEQLILINPDNTPGEKIATTIHELAHATLHNPKMADQYQELPKGQKEFEAEMTSHVLSKYFGLDTSEKAIDYMASWTDNLKALDDKQLTDSLKRVHKTVSNMMKHVENHTKPYSAEKNQGQAPNFPKSPIKGPSR
>NZ_ALQT01000009.1|WP_000938923.1|21978_22236_+|hypothetical-protein
MLQFPSVSEEEFDFEADWLVKAIDDTQKLILFAGQGKNGDLELELDYQNNPKEFKCFSVGDLIQLPREIFVVSETTPYQPKYECF
>NZ_ALQT01000009.1|WP_025194574.1|19484_21851_+|hypothetical-protein
MHVSSSPNITFMLQYTEANSQYVDYTNRDEAVKIDEELSLETNRQMIEGLTEDEMTRIQEAVPETQLDFREYIDYMNRSYATEKQSEELTAVFTQEADYLQKRRLSDLKNKLESAYQNGSLLWQGVISFDNAFLAEQGLYDIATGQVDQKAIKAAMRDMMPTLIQKEGLSDSAFWWGNIHLNTDNVHIHFGLSEVESNREKIFYRPRGRMEYKGNFSQKTINRFKSGVYHGLLKEETRSNLLRKEQILANLKADLMTSVYQEEKITSSAEKNFLEQAYNHLPLNKKWRYGSNARDFAVSKFFLDRYLDSYLQNDGSVAYQEFLKETREFLLAYEGVYSAEKNQVYEKLRKVDGQTIRTLAESKGYDLEHHLASRIMDLRERLANNILRSFKEAAPQIQDVQLEKNLEDFSVLNQNKILDQLPEASVVKSLEYWQKLGYSVKTGEQPISIIKPIYEAYDKHGKGIGRPEFVPDTVYDISQLTENIQLKSLTLKDLSLFSSTDLKELVDAARSKPTLSEKERCELGTFRYALKLSMLEASQKELQVRQKLLEQIQPLTSDQPFVDFKKQSLTQELRLIELQLTPNFKLSEDDKLLKERLKSQFEDSVTLPVSKATPRAIQLPIRQLRAELGLVDQIQDDNILTLLKGRPTTKRDYVEELQTHISIFQLKYKINNRNQQMSQLSDEASIKEMKVANAKGFSELKRLYEKLQPTDDSQSQIAQTVSKQLQERKVIKKAQLQQSQGPVKLNTDFMRQLSASLSRSQQANKKALMERARSDEREEQEERRKAQR
>NZ_ALQT01000009.1|WP_000235568.1|19014_19470_+|hypothetical-protein
MATRINIYFNEETLQKFSEIKSYLLADVGESFERPGQKHSATVVKLIDVFYKLFLETEDKQNFSERLARLEKNLANSDEGRTLKSIRRQMDQLLYLELTNFHAITKASDFDIQDLESVHSRFDPAQHELMARIDDIIKEDVARGQTIKNSH
>NZ_ALQT01000009.1|WP_000739637.1|18212_19004_+|hypothetical-protein
MKKNKFLLVSVLFIAIFLVQPQNFQSFKSAFTQNDIATQLNISDSPEEKNEDLDNAHQTQNEELKSKVFDGQHQVIIVNEKAQFTTNELSLKNGSWEKYNNLDFLNRVGIAEAMLGKDLMPTNKREDISSVKPTGWKNKKINFNGKQDYLYNRSHLIGFQLSGENANVKNLFTGTRALNANFENEKSSMVYYENLVANYIKKTDHHVRYRVTPLFKNVELVARGIRMEAQSIEDDTLSFDVYIFNIQPGYEINYLTGTSKKSQ
>NZ_ALQT01000009.1|WP_000159508.1|17865_18213_+|hypothetical-protein
MTKEIRLRKVPDELFVQLEMMSEKFQYPNLADFLLSQLYRIVENDSLDLYDNKFAATLVDIKEQQAQILDQLLKNEIKLLAYHAKQDIVEELTTDWLQFMDDVDALAAERRAGGR
>NZ_ALQT01000009.1|WP_001042364.1|35222_35933_+|LPXTG-cell-wall-anchor-domain-containing-protein
MNKRKLLTVLSIASVAVLSSVTFADEITPSDPTAPSTTLITPTPVDPGTPTDTTKPSTPVDPGTPTDTTKPSTPVDSGTPTDTTKPSTPVDSGTSTNPSDSEATNTNLGTKPTDVVKPETPKIPEVPSTVTPDVIDKVDKETGNITIKPIQISPDKTIIGTQNGNVIIRDSSGSHLVSASEVGGRLNEDGTVTIKDSSGKTKTLPRTGEAKGFLSIIGATILSFVAYLFKQRVTLN
>NZ_ALQT01000009.1|WP_001088027.1|35999_38807_+|LPXTG-cell-wall-anchor-domain-containing-protein
MNSQETKGHGFFRKSKAYGLVCGIALAAAFTLATSQVSADQVTTQATTQTVTQNQAETVTSTQLDKAVDTAKKAAVAVTTTPAVNHATTTDAQADLANQTQAVKDVTAKAQANTQAIKDATAENAKIDAENKAEAERVAKENKEGQAAVDARNKAGQEAVDARNKAKQQAQDDQKAKIDAENKAESQRVSQLNAQTKAKIDAENKDAQAKADATNAQLQKDYQAKLAEIKSVEAYNAGVRQRNKDAQAKADATNAQLQKDYQAKLALYNQALKAKAEADKQSINNVAFDIKAQAKGVDNAEYGNSIMTAKTKPDGSFEFNHDMIDGVKTIGYGKLTGKVNHHYVANKDGSVTAFVDSVTLYKYEYRNVAQNAAVNQNIVFRVLTKDGRPIFEKAHNGNKTFAETLNKTLQLNLKYELKPHGSSGSVEVFKIHDDWVHDTHGSALVSYVNNNDAVPNVVIPEQPTPPSTEKVTPEAEKPVPEKPVEPKFVTPTLKTYTPVKFIPKEYKPEPITPETFTPEKFTPAQPKVKPHVSIPEKINYSVSVHPVLVPAANPSKEVVDEAGKSINGKTVLPNATLDYVAKQNFSQYKGIKASAEAIAKGFAFVDQPNEALAELTVKSIKASNGDDVSSLLEMRHVLSKDTLDQKLQSLIKEAGISPVGEFYLWTAKDPQAFYKAYVQKGLDITYNLSFKVKKEFTKGQIKNGVAQIDFGNGYTGNIVVNDLTTPEVHKDVLDKEDGKSINNGTVKLGDEVTYKLEGWVVPANRGYDLFEYKFVDHLQHTHDLYLKDKVVAKVAITLKDGTVIPKGTNLVQYTETVYNKETGRYELAFKADFLAQVSRSSAFGADDFIVVKRIKAGDVYNTADFFVNGNKVKTETVVTHTTEKPKPVEPQKATPKAPAKGLPQTGEASVAPLTALGAIILSAIGLAGFKKRKAG
>NZ_ALQT01000009.1|WP_001154845.1|38859_39327_+|single-stranded-DNA-binding-protein
MQEFIANGRVSDIHSDAVGRTSNGHVSFKFEFVCDTSQQDQAGKNLPAFFHVQVYGKQAEVMAQSLVKGSPILIKGEIIQRPYTNSQGQRRTYQFIAPTLQGGITFLESKDAANKRKQEHLNMQQPSDNHSALFSGGENQANGSYPTPIDADEPF
>NZ_ALQT01000009.1|WP_001118910.1|39567_39825_+|hypothetical-protein
MAKQQTDYQSDDLMADSLQIENYLKQGRSCNLYTVLLGIEDGISSYLEHYQLASPQQKFKIFLFSTFYGEKTKRFLEDIRGKRYV
>NZ_ALQT01000009.1|WP_000490278.1|39817_42814_+|type-IV-secretory-system-conjugative-DNA-transfer-family-protein
MFRWIDNRENIKKRIRHKTEEILNLWKHRQGINWKSTGKDRVKTIGFLTKRLATVIPAFVFLLFGNLIFRLVYMLPFVKQDRKRFDKEMKPLLYFKNYRSFVFMGLGFSFIALILTNYLVTVLRAAIRFLYFSVVTLRDNSQTVTFNVDSLLIQNLFNIKVFVIAPILAVPIFIIGLIVAWKSAWVNFEQYRDYNHNEEGDDRFATVKEIHQQYKKVPNKTEIYPGEGGIPLLHEARKNLTGLTLGSQMLWQNRTFSRYLTNAERILGIYAKASGDYYIEDSTTNMLGVGMTRSGKGEGHITTTIDINSRAEIQPSMVIADPKGEHYQSSYKTMRRRGYDVNVLSFQNMDWSMSYNPLALAIDAAKKGYYEKTQTRVNAVAEAIYRKTKPGVGNGNAKYWEDTSISLFNAIAMALIDRANETFKNGEADAWDTVTVRNIAKFLTDLGSEEVFVNDYGDIIENPDRDQQVKKKSKITVYFDNLRKINQEQFSKFRDMADLNFRSSDFASEETKGNVFSSMMSGINLFLQDNIAKLTSKNSIDLESVAFPRRLSIKFRSSSNVAMRNEYAHKTAKITITSQTAWGKATRQVTHVKEATALIDGEGYLTYVIEPKLPDQFFVTIDFNHHNNGDSSVRNKIFQFSAEKVYKKHGKVIALDEYTKKPVLDHIKVIVLNKREDNLLQEEDIDLVYSDNPKVIYLVTPPNRTEYNSIVSLFLDQLFNANYELALSNGRKCINRILHILDEFTNIPAIPHMDTKISIGLGQNILYYLWIQNLEQLTEKYGENTAKTIRDNCSVQIYVKSTSDETNAAFSKALGTRTITRRRRSSNILDEANPNVSIENPRQELLTPTQLAKLQEGEAVILRGVKGRDNAGRKVTTDPIFLHEKTAFPYRYMFLQDEFDHSMTLADIPVESDHRELDLQDIAVGAQNTFSKIIDWRMALTDRMRTNGETPQLAPRKQAVKPLSQAQFTSSADLTQAVIAEVFDEDDEDDGFFVDDVI
>NZ_ALQT01000009.1|WP_000768449.1|42914_43394_+|hypothetical-protein
MKLKKILSFLVLGIALVALAACGKKSTENIIKTELKDSYLGSSSVSAYDGLVFSGGRQELIFDKKNKTIKSGDKEIYYKVVSDKSLPTKPKVALKELEKELDGKNNFTIVISYQKDNLDNSDSFYQIVLSEGGKKIRIIELRRDYAVEGGYFDFAGESE
>NZ_ALQT01000009.1|WP_025194577.1|43511_45677_+|hypothetical-protein
MSYQTFSDLVNEVKNMNGDITGENGEKVAQFYSYWSNYLDSTPAFLSFLAYIPGALAKALYSITASLEHVFNNMFKLFGLFGYLGNSNTVIGQFFFWFQVLGTTIFSLVLVVSAIAGVFTKPVKYKGVITNFLLVTLVTAVLPLALTTISTTIAQDAMNIQTVSSEAPDGSKQYSSLAIQPMKNNIVDLKVLIDNDFSTELFPLDDYGYIKPPKEGATPVNNITDSTDKRDTTDFATRIDFGATYGTTNTKLLDEFEDKHSGMKGLFLHKLNANQNGVETITEHRFVGQLNAFEAVYMRYKVNWIGMFMQYIILIVLLISMSIKLVKSVFDIVIEAMISPLQGYSSLSNSKKYKELLRTMGGALAGIFFEVVIMRVTLEICRDLPTLSVSAVTKLSGGFFDGLNMWEQCLAASLVYIGIFFAAMQGVTMIERWLGVSTGHSDTAQQLLGAMMMGNAFATGAGAIGNGAMAMGGFGINMAKKAAGAVVAGSKVLGNSLATTGGGIRGAFNAVRDQGVVNAAKGGLSNMYSAGDLAGKEAIGKAKDFAGGIADSLGNKEQAGHDAVYRGLKDYSHPEEVKPVSPFDPDASDGFEPLSDAGPAGGGITDSTLPSSEPSDGISEPLQSVTITDESGTNMMPLHEWVGDSEPPKGGYKMFETVPNSITNQPDVKQDLPTSYNHKVQSNFQKSMHQMSYVNQQMQQAGQRMQGQSHIRGAEIDESEE
>NZ_ALQT01000009.1|WP_032458248.1|45682_45967_+|hypothetical-protein
MMDLAGKVVVITGSLRPMTRREVIVFLENQGAIVQGYVSSQTEILLAGHKQLDLFEPDKRSRKYEAALSRIATGQAITILSEEAFFNLVKTSQI
>NZ_ALQT01000009.1|WP_000159131.1|46203_47988_+|ATP-binding-protein
MTKDNFTLGFAPSAVQHLGVGLYKQLPQALMELITNSWDADASEVKIHIDYSRRLISVSDNGHGMTLEELNSNFLRVARNRRSNGIGLTPKGRKLTGKKGLGKLALFGVADRIQVISIKNNLKNGFEMNYRSIQATSEEEFYHPETLYINENVDKKSGTEIKILDISLQNITEINSLALSLSKRFNLFSKSNFLVILSDEKNNIIELDEKVFENSIKPSTKLDFTYRFPEDFQDELKTNNAIIELVNKNVRGAVFTKETPLKATEQGFSVLSHGKLASEHTPHQFSERANDRFYDYATGYFDIDFIDDSPSKDFISTDRQAILWNADPDLQFLRENLNRLMGVIQKKWRQDWNQRKQTKAEKSQEDVPKIKKVLESPDLLKKDKEKIEIISLLLEDDKITIPTALKYKILENVADATQTMGIEENVYKDLIPNNFTVPDELTSKIRMLRAETRLAATSANDPNRFILAQGLLLRGIIDTTITSLLVKYKDTLTKYNLWSGKPPHNDQTYSKSASVKNIYLYDKYISALNFFEFKGEHNKKNKANLKNNLDSVGVIPQLDQLMHDENNWPKFDKLKEMWDTVAPQLLLAFKYIKS
>NZ_ALQT01000009.1|WP_000020265.1|48099_49335_-|DNA-cytosine-methyltransferase
MSHYNIIDIFSGAGGLTEGFRDSSFEIVKHIEKNVAASKTLLLRDIFYYLQQSNKLYLYNEYLNKKITFDNLLKQTPHKVLNKTLNIEIGDDTIDFIFNQIGVKSITGIIGGPPCQAYSTIGRAANRSKKDTDNRIYLYRYYIKFLRKYRPRFFVFENVKGLLSFRDTNGHLLFPMMQEEFREIGYSIDYRLVNTADYGIPQKRERIIIFGVPNDSSELIEKFFDALQSKKEQPISVRTALSDLPQLSQGQEKNQYQHNPNNYVRKHFRKNPSILLTQNVARPHREIDLKIYREVALARSKGKQLKYNELDCSLITHKHTDKFLDRFKALDWNQPAHTVVAHIAKDGHHYIHPDIKQNRSITVREAARLQGFPDDFYFENSRTSAFTQIGNAVPPILSEKIAQAIKIVINN

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

56886 : 107744

Streptococcus_phage(91.3%)

terminase,transposase,portal,holin,capsid

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000459145.1\|56886_58212_+\|transposase	ISLre2 family transposase	NA	NA	NA	NA
WP_000907191.1\|58856_62432_+	DNA-directed RNA polymerase subunit beta	A0A1B1ISA9	uncultured_Mediterranean_phage	3.6e-50	24.5
WP_000228729.1\|62548_66199_+	DNA-directed RNA polymerase subunit beta'	R4TQM7	Phaeocystis_globosa_virus	2.6e-64	25.1
WP_000285373.1\|66312_66678_+	DUF1033 family protein	NA	NA	NA	NA
WP_000250805.1\|66850_67822_+	Flp pilus assembly complex ATPase component	NA	NA	NA	NA
WP_079261081.1\|67727_68759_+	type II secretion system F family protein	NA	NA	NA	NA
WP_000793380.1\|68755_69085_+	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA
WP_000244261.1\|69059_69473_+	type II secretion system protein	NA	NA	NA	NA
WP_000234804.1\|69444_69744_+	hypothetical protein	NA	NA	NA	NA
WP_001044789.1\|69780_71235_-	recombinase family protein	K4JU73	Streptococcus_phage	9.8e-180	65.3
WP_000390807.1\|71392_71731_-	hypothetical protein	NA	NA	NA	NA
WP_000200806.1\|71734_72163_-	hypothetical protein	NA	NA	NA	NA
WP_000823130.1\|72174_72759_-	hypothetical protein	NA	NA	NA	NA
WP_000880826.1\|72761_72959_-	hypothetical protein	B3GVW9	Streptococcus_phage	1.2e-16	58.6
WP_000580170.1\|72977_73718_-	helix-turn-helix transcriptional regulator	J7KJ52	Streptococcus_phage	4.2e-70	57.5
WP_000215930.1\|73871_74093_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_000072970.1\|74536_74869_+	hypothetical protein	K4JW96	Streptococcus_phage	8.5e-31	67.3
WP_000131170.1\|75089_75761_+	essential recombination function protein	M1IEW6	Streptococcus_phage	3.2e-101	81.7
WP_000159058.1\|75764_76760_+	DUF1351 domain-containing protein	A0A1S5S8J6	Streptococcus_phage	8.3e-98	62.1
WP_000609569.1\|77404_77878_+	single-stranded DNA-binding protein	M1PL31	Streptococcus_phage	2.7e-54	81.3
WP_001082484.1\|77874_78153_+	hypothetical protein	A0A1S5S8Z6	Streptococcus_phage	6.2e-43	84.8
WP_029667750.1\|78166_78958_+	DNA methyltransferase	U4KJA1	Streptococcus_phage	3.5e-139	89.3
WP_000163592.1\|78944_79148_+	hypothetical protein	A0A1S5SCK3	Streptococcus_phage	1.7e-21	73.1
WP_000862186.1\|79144_79558_+	helix-turn-helix transcriptional regulator	K4JTK7	Streptococcus_phage	2.8e-39	60.7
WP_000412398.1\|79570_80002_+	hypothetical protein	U4KJ68	Streptococcus_phage	5.8e-56	87.5
WP_001293548.1\|80003_80738_+	hypothetical protein	A0A141E1K8	Streptococcus_phage	2.2e-79	62.8
WP_001065277.1\|80789_81038_+	hypothetical protein	A0A1S5SEE7	Streptococcus_phage	1.3e-23	58.4
WP_000836878.1\|81380_81707_+	DUF1372 family protein	NA	NA	NA	NA
WP_001019158.1\|81839_82448_+	DUF1642 domain-containing protein	Q9MCL5	Streptococcus_virus	2.1e-19	56.5
WP_000958011.1\|82434_82683_+	hypothetical protein	NA	NA	NA	NA
WP_000667207.1\|82693_83089_+	hypothetical protein	K4JU53	Streptococcus_phage	9.1e-40	60.2
WP_000614972.1\|83085_83475_+	hypothetical protein	J7KJ21	Streptococcus_phage	5.1e-27	49.6
WP_000164677.1\|83644_84025_+	hypothetical protein	K4JTJ9	Streptococcus_phage	1.4e-24	44.7
WP_001103600.1\|84067_84268_+	hypothetical protein	A0A1P8VVP4	Streptococcus_phage	1.7e-18	84.2
WP_001042637.1\|84260_84506_+	hypothetical protein	NA	NA	NA	NA
WP_001038279.1\|84591_85671_+	DUF4417 domain-containing protein	A0A1S5S8J8	Streptococcus_phage	1.9e-143	68.9
WP_000509432.1\|85660_86071_+	hypothetical protein	K4K7P5	Streptococcus_phage	3.6e-47	70.1
WP_001136854.1\|86263_86707_+	hypothetical protein	A0A1C9LX59	Streptococcus_phage	1.2e-48	72.0
WP_001167688.1\|86693_88007_+\|terminase	PBSX family phage terminase large subunit	K4JW72	Streptococcus_phage	5.6e-219	82.8
WP_001878576.1\|88069_89602_+\|portal	phage portal protein	M1IFC5	Streptococcus_phage	2.1e-225	77.3
WP_000140092.1\|89700_90870_+\|capsid	phage capsid protein	A0A1P8VVK3	Streptococcus_phage	5.7e-138	64.7
WP_000011256.1\|91005_91584_+	scaffold protein	A0A1C9LX53	Streptococcus_phage	1.4e-41	49.2
WP_000224752.1\|91606_92491_+	hypothetical protein	A0A1S5S8N6	Streptococcus_phage	5.8e-111	70.9
WP_001269647.1\|92501_92759_+	hypothetical protein	A0A1P8VVQ1	Streptococcus_phage	1.2e-08	56.9
WP_000221832.1\|92800_93190_+	hypothetical protein	K4JXK7	Streptococcus_phage	3.1e-40	67.9
WP_000565942.1\|93179_93506_+	hypothetical protein	M1IEU8	Streptococcus_phage	3.4e-32	58.9
WP_000077535.1\|93505_93868_+	hypothetical protein	A0A1P8VVL8	Streptococcus_phage	6.4e-32	58.8
WP_001180646.1\|93868_94276_+\|capsid	phage capsid protein	A0A1P8VVK7	Streptococcus_phage	2.8e-52	76.5
WP_000251918.1\|94278_94734_+	hypothetical protein	A0A1P8VVM4	Streptococcus_phage	5.0e-58	73.0
WP_000069050.1\|94765_95164_+	hypothetical protein	M1IR95	Streptococcus_phage	5.8e-26	51.5
WP_000459714.1\|95166_95751_+	hypothetical protein	A0A1P8VVK8	Streptococcus_phage	4.8e-69	64.9
WP_000763170.1\|95769_99579_+	tape measure protein	A0A1P8VVL4	Streptococcus_phage	5.0e-191	64.9
WP_001293186.1\|99571_101020_+	hypothetical protein	A0A1S5SE21	Streptococcus_phage	1.5e-63	32.1
WP_001878579.1\|101019_103821_+	hypothetical protein	J7KJ56	Streptococcus_phage	3.1e-17	29.1
WP_000536251.1\|103831_105844_+	hypothetical protein	J7KC14	Streptococcus_phage	1.7e-174	52.4
WP_000404431.1\|105857_106184_+	DUF1366 domain-containing protein	J7KDI9	Streptococcus_phage	1.3e-31	68.2
WP_000698337.1\|106158_106371_+	hypothetical protein	J7KDP6	Streptococcus_phage	2.1e-14	60.0
WP_000215499.1\|106383_106686_+	hypothetical protein	X2KT07	Streptococcus_phage	2.2e-25	59.6
WP_001001959.1\|106687_107023_+\|holin	phage holin	A0A1P8VVK6	Streptococcus_phage	2.1e-37	72.1
WP_000236381.1\|107024_107744_+	CHAP domain-containing protein	A0A1U9WRD0	Streptococcus_virus	1.6e-58	72.1

Anti-CRISPR protein detection

Acr_ID: NZ_ALQT01000009.1|WP_000384271.1|151867_152194_+|hypothetical-protein

Click the colored protein region to show detailed information

Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_ALQT01000009.1|WP_000384271.1|151867_152194_+|hypothetical-protein

151867_152194_+

108 aa aa

AcrIIA21

hit_Aca_id	identity	query_coverage	hit_coverage
anti_CRISPR3639\|WP_000384271.1\|AcrIIA21\|II-A\|Verified\|Streptococcus	1.0	1	1.0

2. NZ_ALQT01000013

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_ALQT01000013_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_ALQT01000013_1

124466-125223

TypeI

I-C

Consensus_repeat	Method
ATTTCAATCCACGCACCCGCAAAGGGTGCGAC	CRT
ATTTCAATCCACGCACCCGCAAAGGGTGCGAC	PILER-CR
ATTTCAATCCACGCACCCGCAAAGGGTGCGAC	CRISPRCasFinder

11 spacers

cas2,cas1,cas4,cas7,cas8c,cas5,cas3

The CRISPR arrays of NZ_ALQT01000013_1

>merge|NZ_ALQT01000013|1|124466-125223|CRT,PILER-CR,CRISPRCasFinder
AGTTGAAACTACACACCCGCAAAGGGGCGATGATAATGAATTAATAAAAAAATAATCATTATTAATTTCAATCCACGCACCCGCAAAGGGTGCGACGCGTTGATATGAAAGGAAATTATAGAGATATGATATTTCAATCCACGCACCCGCAAAGGGTGCGACAAAACGGATGGTTGTATATTGCAGGCTATCAGCTAATTTCAATCCACGCACCCGCAAAGGGTGCGACTGATCTAATTAGTGATATGCTACGTCTTTACGACATTTCAATCCACGCACCCGCAAAGGGTGCGACTAATTGAAGATGCAAAAATTTTAAACATACCACCTATTTCAATCCACGCACCCGCAAAGGGTGCGACTTTGGCTGTTTGAGTAGCTCGTTGACTTTTGCCTATTTCAATCCACGCACCCGCAAAGGGTGCGACATAATTATGGTAGTCTTATTTTTAATATAAAATAATTTCAATCCACGCACCCGCAAAGGGTGCGACGTTTGCTCTGCGTCAAGCGTAACAGCGAGACTTAATTTCAATCCACGCACCCGCAAAGGGTGCGACGTCTTTTCAGACAGAACATAAATGGAAATATAGTAATTTCAATCCACGCACCCGCAAAGGGTGCGACTTTTCCGTTTTTTCATAGCAATATGTGGGACTATATTTCAATCCACGCACCCGCAAAGGGTGCGACGTGCAATAACGATTGATTCTTCATTGATAGTTGATTTCAATCCACGCACCCGCAAAGGGTGCGAC

>NZ_ALQT01000013|1|1|124466-125223|CRT
AGTTGAAACTACACACCCGCAAAGGGGCGATG	ATAATGAATTAATAAAAAAATAATCATTATTA
ATTTCAATCCACGCACCCGCAAAGGGTGCGAC	GCGTTGATATGAAAGGAAATTATAGAGATATGAT
ATTTCAATCCACGCACCCGCAAAGGGTGCGAC	AAAACGGATGGTTGTATATTGCAGGCTATCAGCTA
ATTTCAATCCACGCACCCGCAAAGGGTGCGAC	TGATCTAATTAGTGATATGCTACGTCTTTACGAC
ATTTCAATCCACGCACCCGCAAAGGGTGCGAC	TAATTGAAGATGCAAAAATTTTAAACATACCACCT
ATTTCAATCCACGCACCCGCAAAGGGTGCGAC	TTTGGCTGTTTGAGTAGCTCGTTGACTTTTGCCT
ATTTCAATCCACGCACCCGCAAAGGGTGCGAC	ATAATTATGGTAGTCTTATTTTTAATATAAAATA
ATTTCAATCCACGCACCCGCAAAGGGTGCGAC	GTTTGCTCTGCGTCAAGCGTAACAGCGAGACTTA
ATTTCAATCCACGCACCCGCAAAGGGTGCGAC	GTCTTTTCAGACAGAACATAAATGGAAATATAGTA
ATTTCAATCCACGCACCCGCAAAGGGTGCGAC	TTTTCCGTTTTTTCATAGCAATATGTGGGACTAT
ATTTCAATCCACGCACCCGCAAAGGGTGCGAC	GTGCAATAACGATTGATTCTTCATTGATAGTTG
ATTTCAATCCACGCACCCGCAAAGGGTGCGAC

>NZ_ALQT01000013|1|1|124530-125223|PILER-CR
ATTTCAATCCACGCACCCGCAAAGGGTGCGAC	GCGTTGATATGAAAGGAAATTATAGAGATATGAT
ATTTCAATCCACGCACCCGCAAAGGGTGCGAC	AAAACGGATGGTTGTATATTGCAGGCTATCAGCTA
ATTTCAATCCACGCACCCGCAAAGGGTGCGAC	TGATCTAATTAGTGATATGCTACGTCTTTACGAC
ATTTCAATCCACGCACCCGCAAAGGGTGCGAC	TAATTGAAGATGCAAAAATTTTAAACATACCACCT
ATTTCAATCCACGCACCCGCAAAGGGTGCGAC	TTTGGCTGTTTGAGTAGCTCGTTGACTTTTGCCT
ATTTCAATCCACGCACCCGCAAAGGGTGCGAC	ATAATTATGGTAGTCTTATTTTTAATATAAAATA
ATTTCAATCCACGCACCCGCAAAGGGTGCGAC	GTTTGCTCTGCGTCAAGCGTAACAGCGAGACTTA
ATTTCAATCCACGCACCCGCAAAGGGTGCGAC	GTCTTTTCAGACAGAACATAAATGGAAATATAGTA
ATTTCAATCCACGCACCCGCAAAGGGTGCGAC	TTTTCCGTTTTTTCATAGCAATATGTGGGACTAT
ATTTCAATCCACGCACCCGCAAAGGGTGCGAC	GTGCAATAACGATTGATTCTTCATTGATAGTTG
ATTTCAATCCACGCACCCGCAAAGGGTGCGAC

>NZ_ALQT01000013|1|1|124530-125223|CRISPRCasFinder
ATTTCAATCCACGCACCCGCAAAGGGTGCGAC	GCGTTGATATGAAAGGAAATTATAGAGATATGAT
ATTTCAATCCACGCACCCGCAAAGGGTGCGAC	AAAACGGATGGTTGTATATTGCAGGCTATCAGCTA
ATTTCAATCCACGCACCCGCAAAGGGTGCGAC	TGATCTAATTAGTGATATGCTACGTCTTTACGAC
ATTTCAATCCACGCACCCGCAAAGGGTGCGAC	TAATTGAAGATGCAAAAATTTTAAACATACCACCT
ATTTCAATCCACGCACCCGCAAAGGGTGCGAC	TTTGGCTGTTTGAGTAGCTCGTTGACTTTTGCCT
ATTTCAATCCACGCACCCGCAAAGGGTGCGAC	ATAATTATGGTAGTCTTATTTTTAATATAAAATA
ATTTCAATCCACGCACCCGCAAAGGGTGCGAC	GTTTGCTCTGCGTCAAGCGTAACAGCGAGACTTA
ATTTCAATCCACGCACCCGCAAAGGGTGCGAC	GTCTTTTCAGACAGAACATAAATGGAAATATAGTA
ATTTCAATCCACGCACCCGCAAAGGGTGCGAC	TTTTCCGTTTTTTCATAGCAATATGTGGGACTAT
ATTTCAATCCACGCACCCGCAAAGGGTGCGAC	GTGCAATAACGATTGATTCTTCATTGATAGTTG
ATTTCAATCCACGCACCCGCAAAGGGTGCGAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_ALQT01000013.1\|WP_000345444.1\|128221_130117_-\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	cas8c	cd09642_cas8c_CAS-I-C	gnl\|CDD\|187773
NZ_ALQT01000013.1\|WP_000889456.1\|127368_128217_-\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	cas7	COG3649_cas7_CAS-I-C	gnl\|CDD\|226175
NZ_ALQT01000013.1\|WP_000492962.1\|122306_123209_-\|magnesium-transporter-CorA-family-protein	unknown	unknown	gnl\|CDD\|213361
NZ_ALQT01000013.1\|WP_000735207.1\|125673_126699_-\|type-I-C-CRISPR-associated-endonuclease-Cas1	cas1	cd09721_cas1_CAS-I-C	gnl\|CDD\|188360
NZ_ALQT01000013.1\|WP_000989528.1\|125369_125663_-\|CRISPR-associated-endonuclease-Cas2	cas2	COG1343_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|187856
NZ_ALQT01000013.1\|WP_000988350.1\|130977_133401_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_ALQT01000013.1\|WP_032455446.1\|130116_130845_-\|type-I-C-CRISPR-associated-protein-Cas5	cas5	cd09752_cas5_CAS-I-C	gnl\|CDD\|273847
NZ_ALQT01000013.1\|WP_000592256.1\|119482_119932_+\|thiol-reductase-thioredoxin	unknown	unknown	gnl\|CDD\|273542
NZ_ALQT01000013.1\|WP_000049316.1\|123369_124329_-\|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223745
NZ_ALQT01000013.1\|WP_000032189.1\|135409_138061_-\|valine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235582
NZ_ALQT01000013.1\|WP_000748011.1\|119976_120969_-\|aspartate--ammonia-ligase	unknown	unknown	gnl\|CDD\|225304
NZ_ALQT01000013.1\|WP_000790647.1\|116965_118039_-\|PDZ-domain-containing-protein	unknown	unknown	gnl\|CDD\|226011
NZ_ALQT01000013.1\|WP_086163524.1\|126695_127340_-\|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl\|CDD\|224385
NZ_ALQT01000013.1\|WP_000137511.1\|115556_116891_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|277323
NZ_ALQT01000013.1\|WP_000161892.1\|118028_118514_-\|pantetheine-phosphate-adenylyltransferase	unknown	unknown	gnl\|CDD\|173914
NZ_ALQT01000013.1\|WP_000021305.1\|121081_122146_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225197
NZ_ALQT01000013.1\|WP_000384889.1\|118510_118801_-\|hypothetical-protein	unknown	unknown	unknown
NZ_ALQT01000013.1\|WP_000997618.1\|138082_138775_-\|hypothetical-protein	unknown	unknown	unknown
NZ_ALQT01000013.1\|WP_000934859.1\|134412_135192_+\|hypothetical-protein	unknown	unknown	unknown
NZ_ALQT01000013.1\|WP_001266830.1\|118812_119352_-\|16S-rRNA-(guanine(966)-N(2))-methyltransferase-RsmD	unknown	unknown	gnl\|CDD\|367574

Protein	Function_ID	Function_description	E-value
NZ_ALQT01000013.1\|WP_000345444.1\|128221_130117_-\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	gnl\|CDD\|187773	cd09642, Cas8c_I-C, CRISPR/Cas system-associated protein Cas8c. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins, some contain Zn-finger domain; signature gene for I-C subtype; also known as Csd1 family.	0
NZ_ALQT01000013.1\|WP_000889456.1\|127368_128217_-\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	gnl\|CDD\|226175	COG3649, COG3649, CRISPR system related protein [Defense mechanisms].	5.09634e-156
NZ_ALQT01000013.1\|WP_000492962.1\|122306_123209_-\|magnesium-transporter-CorA-family-protein	gnl\|CDD\|213361	cd12827, EcCorA_ZntB-like_u2, uncharacterized bacterial subfamily of the Escherichia coli CorA-Salmonella typhimurium ZntB family. A uncharacterized subfamily of the Escherichia coli CorA-Salmonella typhimurium ZntB (EcCorA-ZntB_like) family of the MIT superfamily of essential membrane proteins involved in transporting divalent cations (uptake or efflux) across membranes.The EcCorA-ZntB-like family includes the Mg2+ transporters Escherichia coli and Salmonella typhimurium CorAs, which can also transport Co2+, and Ni2+. Structures of the intracellular domain of EcCorA-ZntB-like family members, Vibrio parahaemolyticus and Salmonella typhimurium ZntB, form funnel-shaped homopentamers, the tip of the funnel is formed from two C-terminal transmembrane (TM) helices from each monomer, and the large opening of the funnel from the N-terminal cytoplasmic domains. The GMN signature motif of the MIT superfamily occurs just after TM1, mutation within this motif is known to abolish Mg2+ transport through Salmonella typhimurium CorA. Natural variants such as GVN and GIN, such as occur in some ZntB family proteins, may be associated with the transport of different divalent cations, such as zinc and cadmium. The functional diversity of MIT transporters may also be due to minor structural differences regulating gating, substrate selection, and transport.	4.87179e-70
NZ_ALQT01000013.1\|WP_000989528.1\|125369_125663_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	3.98207e-31
NZ_ALQT01000013.1\|WP_000735207.1\|125673_126699_-\|type-I-C-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|188360	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the DVULG subtype of CRISPR/Cas system.	5.95494e-174
NZ_ALQT01000013.1\|WP_000988350.1\|130977_133401_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	1.42664e-155
NZ_ALQT01000013.1\|WP_032455446.1\|130116_130845_-\|type-I-C-CRISPR-associated-protein-Cas5	gnl\|CDD\|273847	TIGR01876, cas_Cas5d, CRISPR-associated protein Cas5, subtype I-C/DVULG. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This small Cas family is represented by CT1134 of Chlorobium tepidum. This family belongs to a set of several Cas protein families, one each for a number of different CRISPR/Cas subtypes, that share a region of N-terminal sequence similarity modeled by TIGR02593. This family represents the Dvulg subtype of CRISPR/Cas locus.	1.52076e-112
NZ_ALQT01000013.1\|WP_000592256.1\|119482_119932_+\|thiol-reductase-thioredoxin	gnl\|CDD\|273542	TIGR01295, Pediocin_PA-1_biosynthesis_protein_PedC, bacteriocin transport accessory protein, putative. This model describes a small family of proteins believed to aid in the export of various class II bacteriocins, which are ribosomally-synthesized, non-lantibiotic bacterial peptide antibiotics. Members of this family are found in operons for pediocin PA-1 from Pediococcus acidilactici and brochocin-C from Brochothrix campestris.	2.96539e-08
NZ_ALQT01000013.1\|WP_000049316.1\|123369_124329_-\|Gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	1.72879e-57
NZ_ALQT01000013.1\|WP_000032189.1\|135409_138061_-\|valine--tRNA-ligase	gnl\|CDD\|235582	PRK05729, valS, valyl-tRNA synthetase; Reviewed.	0
NZ_ALQT01000013.1\|WP_000748011.1\|119976_120969_-\|aspartate--ammonia-ligase	gnl\|CDD\|225304	COG2502, AsnA, Asparagine synthetase A [Amino acid transport and metabolism].	0
NZ_ALQT01000013.1\|WP_000790647.1\|116965_118039_-\|PDZ-domain-containing-protein	gnl\|CDD\|226011	COG3480, SdrC, Predicted secreted protein containing a PDZ domain [Signal transduction mechanisms].	1.28781e-135
NZ_ALQT01000013.1\|WP_000137511.1\|115556_116891_-\|hypothetical-protein	gnl\|CDD\|277323	cd00845, MPP_UshA_N_like, Escherichia coli UshA-like family, N-terminal metallophosphatase domain. This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.	7.10499e-59
NZ_ALQT01000013.1\|WP_000161892.1\|118028_118514_-\|pantetheine-phosphate-adenylyltransferase	gnl\|CDD\|173914	cd02163, PPAT, Phosphopantetheine adenylyltransferase. Phosphopantetheine adenylyltransferase (PPAT). PPAT is an essential enzyme in bacteria, responsible for catalyzing the rate-limiting step in coenzyme A (CoA) biosynthesis. The dinucleotide-binding fold of PPAT is homologous to class I aminoacyl-tRNA synthetases. CoA has been shown to inhibit PPAT and competes with ATP, PhP, and dPCoA. PPAT is a homohexamer in E. coli.	9.07742e-77
NZ_ALQT01000013.1\|WP_000021305.1\|121081_122146_-\|hypothetical-protein	gnl\|CDD\|225197	COG2315, MmcQ, Uncharacterized protein conserved in bacteria [Function unknown].	1.01714e-19
NZ_ALQT01000013.1\|WP_086163524.1\|126695_127340_-\|CRISPR-associated-protein-Cas4	gnl\|CDD\|224385	COG1468, COG1468, CRISPR-associated protein Cas4 (RecB family exonuclease) [Defense mechanisms].	1.05387e-30
NZ_ALQT01000013.1\|WP_001266830.1\|118812_119352_-\|16S-rRNA-(guanine(966)-N(2))-methyltransferase-RsmD	gnl\|CDD\|367574	pfam03602, Cons_hypoth95, Conserved hypothetical protein 95.	9.30355e-83

>NZ_ALQT01000013.1|WP_000049316.1|123369_124329_-|Gfo/Idh/MocA-family-oxidoreductase
MSKVRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSRTLESAQAFANKYHLPKAYDKLEDMLADESIDVIYVATINQDHYKVAKAALLAGKHVLVEKPFTLTYDQANELFALAESCNLFLMEAQKSVFIPMTQVIKKLLASGEIGEVISISSTTAYPNIDHVTWFRELELGGGTVHFMAPYALSYLQYLFDATITHASGTATFPKGQSDSQSKLLLQLSNGVLVDIFLTTRLNLPHEMIIYGTEGRLIIPHFWKTTHAKLVRNDTSAQTIQVDMVSDFEKEAYHVSQMILEGQRVSHIMTPQLTLSGVKIIEDLYRSWGK
>NZ_ALQT01000013.1|WP_000492962.1|122306_123209_-|magnesium-transporter-CorA-family-protein
MFSSDFGFEIINVDDLSLQEERFLPSELLAYARDENESSFVRDIEGHLTLVYQLLDTQGHVDDVRHVPRVIPVTLFLKEDGLFVLANHKNINLVKKALNRVEKVDSPKHLLLSLVTAFSKQYFDVLDTISEERDKLINDLRKRPNKSNLARLANLQSGTVHLMMGTKQNFEMLTDLQNIEQDKENTRNEKMQLQDAIIEARQLSNMCSLNSQVFQELSSSYNNVLSNNLNDNVTTLTIISIGISIIAMVTSFYGMNVKLPFDSVDAVWVLIILITTIITIMLSIVMYIYVHKEDNHPKHK
>NZ_ALQT01000013.1|WP_000021305.1|121081_122146_-|hypothetical-protein
MSIESDFFRKKRFIFSSLEEFGFIKSDQEYIYCQTFMDNDFKAIITISLDGKIAGKVIDSALEEEYLPLRAANYNGSFVGEVRSAYMAILGDISDSCCKDLLFTKDQSNRLAEKIAKTFEDSVDYPFAKHPQYASYRVSGKWYALLFPLKMGKLENVPAQLSEDEVEVLNIKVNPQDMEILLQKEGIYPSYHMSKKTWVSIVLDNTLSDIEIFKLVSDSRKLVSPNKKSNSEPEFWIIPANPKFYDIDKEFAEHQLIDWTQKGKIAVGDYVFIYITAPIRALRYVCQVIERDLKTSTYLGARDVKAYMRLKLIRQFEDSTYPVAFLAEHGVKTVRGPRRMTKELRQVMAKTILE
>NZ_ALQT01000013.1|WP_000748011.1|119976_120969_-|aspartate--ammonia-ligase
MKKSFIHQQQEISFVKNTFTQYLIDKLEIVEVQGPILSQVGDGMQDNLSGIEHPVSVKVLNIPEAEFEVVHSLAKWKRHTLARFGFNEGEGLFVHMKALRPDEDSLDPTHSVYVDQWDWEKVIPDGRRNLDYLKETVEKIYKAIRLTELAVEARFDIESILPKRITFIHTEELVEKYPDLSPKERENAIAKEYGAVFLIGIGGELADGKPHDGRAPDYDDWTTPSENGFKGLNGDILVWNEQLGTAFELSSMGIRVDEDALKRQVVLTGDEDRLEFEWHKTLLRGFFPLTIGGGIGQSRLAMFLLRKKHIGEVQSSVWPKEVRDTFENIL
>NZ_ALQT01000013.1|WP_000592256.1|119482_119932_+|thiol-reductase-thioredoxin
MIKKLLLSLIAILCLTTLKSNLSSADTMTISPQQYQHMITNSDLIAITDKALVSKSQQSEATIFIGRPTCQYCRAFLPKLLKSQATLHSKIYYLDSQKYKGERLKSFFKKHHITTVPNLAHYQRGKMTKYLVQGSQATPQQIQTFLSQK
>NZ_ALQT01000013.1|WP_001266830.1|118812_119352_-|16S-rRNA-(guanine(966)-N(2))-methyltransferase-RsmD
MRVVAGTFGGRPLKTLDGKTTRPTTDKVKGAIFNMIGPFFEGGRVLDLFSGSGSLAIEAISRGMDQAVLVEKDRRAQVVIQENIAMTKSPEQFQLLKMEANRALEQLTGQFDLVLLDPPYAKEEIVKQIQIMDSKGLLGDDIMIVCETDKSVDLPEEIASFGIWKQKIYGISKVTVYVR
>NZ_ALQT01000013.1|WP_000384889.1|118510_118801_-|hypothetical-protein
MDYKLVMIILILVILIYLLLRLHYLEELLKHYHFKNDEGVCSLSRTKNPLYLLMAMITFLPNLINWIANGFEAIDIVRLIPVVVFLWLYYCGDDDE
>NZ_ALQT01000013.1|WP_000161892.1|118028_118514_-|pantetheine-phosphate-adenylyltransferase
MTKKALFTGSFDPVTNGHLDIIERASYLFDHVYIGLFYNLEKQGYFSIECRKKMLEEAIRQFKNVSVLVAQDRLAVDLAREVGAKYFVRGLRNSQDFDYEANLEFFNKQLADDIETVYLSTSPSLSPISSSRIRELIHFKASVKPFVPKSVVREVEKMSEE
>NZ_ALQT01000013.1|WP_000790647.1|116965_118039_-|PDZ-domain-containing-protein
MKNKDPKRKHKSLLGLLKWWIIGFAFLLLVLASLVVRLPYYLEMPGGAYDIRSVLKVNKKADKAKGSYNFVAVSVSQATPAQVFYAWLTPFTELSSKEETTGGFSNDDYLRINQFYMETSQNESVYQALKLANKQVSLTYKGVYVLNLAKNSTFKDRLHLADTVTGVNGKSFKNSSQLIKYVAALHLGDKVKVQYTSQGKKKESVGKVIKLSNGKNGIGIGLTDHTEVSSDVPVDFNTEGVGGPSAGLMFTLAIYDQLVKEDLRKGRKIAGTGTIEQNGHVGDIGGAGLKVVSAAKKGMDIFFVPNNPIDKNAKKGKTKVQTNYQEAKAAAKRLGTKMKIVPVQNVQQAIDYLKKTK
>NZ_ALQT01000013.1|WP_000137511.1|115556_116891_-|hypothetical-protein
MTELIRILHLNDLHSHFENFPKVKRFFHDNQAQPIETISLDLGDNIDKSHPLTEASSGKANIQLMNELGIELATIGNNEGVGLSKKDLDQVYKDSDFTVIVGNLKDNTIEPSWAKPYIIYETQQGTKLAFLAYTFPYYKTYEPHGWMIEDPIDCLKCHLQINEIKEANCRILMSHLGIRFDTRIAQEFSEIDLIIGAHTHHLFEEGELINGTYLAAAGKYGRFVGSIDITFDNHTLKDILISTCDTKQLTGYPSDSDWAKKIESEGKEQLRKESLISFPAPLSLEESCQLVMDAMLFYAGADVAIINSGLIVQPFRKDFSRKNLHESLPHQMRLAKLTVSSQELLEIYETIYQQGQFLAQQKIHGMGFRGKYFGDVLHSGFDYKNGKIVYNEKDIDAKEEVILVIVDQYYFASYFECLKTKKVDLLFPELLRDVVADYLINMTL
>NZ_ALQT01000013.1|WP_000989528.1|125369_125663_-|CRISPR-associated-endonuclease-Cas2
MMVLVTYDVNTKTVAGRRRLRHVAKLCVDYGQRVQNSVFECSVTPAEFVEIKNELLTIIDQKSDSIRFYLLGKNWQNRVETIGKNDSYDPDIGVLLL
>NZ_ALQT01000013.1|WP_000735207.1|125673_126699_-|type-I-C-CRISPR-associated-endonuclease-Cas1
MKKLLNTLYLTQDNFYLTRERDNIVIKQEGKIVHRFPYRIIDGIICFSYLGASPSLIELCTEKQINLSFHTPQGRFCGRFVGSTNGNVLLRREHYRLADHALSIEYAKRFILAKVSNSRKYLIRFKRDHRDRIDIQLFEDINTELMWALELIQSAPDKETLLGIEGQAANQYFRAFNELVLTDKDTFRFNGRTRRPPQDCINALMSLGYSLLTYECQSALEAVGLDSYVGFYHTDRPGRASLALDLVEEFRSYIVDRFVFSLVNKGQLNKRHFDIKENSSVILTEKGRTIFIESWQKRKHTVVEHPFTKEKVKLMLLPYVQAQLLSKAIRGDLESYPPFLI
>NZ_ALQT01000013.1|WP_086163524.1|126695_127340_-|CRISPR-associated-protein-Cas4
MLSGIQHFQFCKRQWALIHIEQQWLDNEATAHGQILHTKADNPYIKEKRKDFLVSRAMHVSSKILGLYGILDVVEFYKDENGFSLKGKRGKWLPCIVEYKRGKPKKDRRDIVQLVAQTICLEETFGCYIEKGCLYYHSVNQKKTIEITEELRQEVLDLAEQMHFYYDNKIIGKAEYFKNCPLCSLVDICKPRLSKKTRNVDNYIRQSLVNEDSL
>NZ_ALQT01000013.1|WP_000889456.1|127368_128217_-|type-I-C-CRISPR-associated-protein-Cas7/Csd2
MLEHKIDFIVTFEVKEANANGDPLNGNMPRTDAKGYGVMSDVSIKRKIRNRLQDMGKPIFVQANERIEDDFRSLEKRFSQHFTAKTPDKEIEEKANALWFDVRAFGQVFTYLKKSIGVRGPISISMAKSLEPIVISSLQITRSTNGMEAKNNSGRSSDTMGTKHFVDYGIYVLKGSINAYFAEKTGFSQEDAEAIKEVLVSLFENDASSARPEGSMRVREVFWFTHSSKLGNVSSARVFDLLEYNQSIEEKSTYDAYQIHLNQEKLAKYEAKGLTVKILEGL
>NZ_ALQT01000013.1|WP_000345444.1|128221_130117_-|type-I-C-CRISPR-associated-protein-Cas8c/Csd1
MDFFTSLLKTYEKAELADLVDHQKRNNEPVLLPIYHTSLKSNGKNIISVKLDKDGQFHKAEFMTDKQMIIFPVTADSVARSGSNPAPHPLVDKFAYYSAEMGQSQYDSFHKQLNNWIDYCEEGDVKRFLTIVQQFILKPEFLTLILDSLIGPDYQNNQLKVTFCDATGKEKLIDLSACFLEFSIDQFQGFKNESVSTFKTLHQSYISFVEANRENLGICNISGREEQLTDKHRGLMGNAKIISVSNKREAYKGRFREREDVFSVGYETSEKIHLMIKYLLENKNTSTWLGSSQYLINWFSDDLTNDSRLDIVSPIFDDGLEEDDDEDMPSVIALATEENKRIGKSFIKGQKLFANDATYYIAILNKTSNGRIALKYFRQIQASQLLTNLDKWQEKYSWESRSKSGKSRLRTPAFHDILNVSYGVDRDRFLELDNDNFKSDQVQKLVTSLIDGKPMPQSIVKKLGNNVKERHRYRKHWYQVEQVCLAILHKQNGEEFSPMLNHTNQNRSYLFGRLLAIFELIETLRYSLEGNGSDRITNAERYWTAYTGQPTKLMMLLENKIKPYEETLKLNRRGSWKKLEKEKEEILELLNPLLETETMEKPLDYRFIFGYYAEKNYYYPKQNTEVTESEE
>NZ_ALQT01000013.1|WP_032455446.1|130116_130845_-|type-I-C-CRISPR-associated-protein-Cas5
MYRSRDFYVRVSGQRALFTNPATKGGSERASYSVPTRQALNGIVDAIYYKPTFTNIVTEVKVINQIQTELQGVRALLHDYSADLSYVSYLSDVVYLIKFHFIWNEDRKDLNSDRLPAKHEAIMERSIRKGGRRDVFLGTRESVGLVDDISQEEYEAAVSYYNGVNIDLGIMFHSFAYPKDKKTPLKSYFTKTVMENGVITFKTQSDCDIVNTLSSYAFKVPGEIKSVNDEYMEYDAMEKGEN
>NZ_ALQT01000013.1|WP_000988350.1|130977_133401_-|CRISPR-associated-helicase/endonuclease-Cas3
MMTKETLAHYQKKIEQESEKKQSLDEHLWHVACFSRQEASIIGQGDVLFLISLYHDLGKADRAFQDKLLNNPNRHVDHSYAGAKYLCSIIGPHLKSRGVDKDERMTFNEMVGYVISAHHGMYDFCYCSDDAEYYSFNKFKNRINRDLDDYHYHEDIKGYAIKLEEKLCDYGYKDLRELIDKAFDNYQQAMSSLNWQDNSEWDYYQSCMVRLYLSLLKNADILDTVNAYGLEISPMDKTERSSLKHSYLAAIEQKYASFGRPNNQLNTIRTEIAERVKERGKRDSKGIYRLDLPTGAGKTNLSMRYAFHQLVHQDKSRFFYITPFLSVLEQNASEIRKVTGDLGVLEHHSNMVKQANEDDDKDSLLSAYLIDSWDSQVVLTSMVQFFQTLFKTKSANLRRFSSLINSVVILDEVQSLPIEVTTLFNLTMNFLNKVMDTTIVLCTATQPAYDSSEIDHRICYGGNLGELAEIVELTIEEKQIFSRTELRKFDDSDQKVYLTDVINLILGEENSVLAIFNTKKTVHNCYTMLKDMTDRPIYQLSTNMCAQHRLDLVAKIKTELQNNTPIICISTQLIEAGVDVDFHRVIRSYSGIDSIVQAAGRCNREGKRDKGQVTLVNLTNEEENISRLTEIKAKKEATESILYKIGSPINISTLNRDFFEYYYANNQGLMDYPLEDNISIYDYLSLNTYQTANKKFKGKLKQAFKTAGAKMNLINNDMIGILVPYGDAEKKLAYLEELGTSHFLSAEDYQMIKSLLKELQPFTVNVRENDPLLEATKSYLNGQILVLTSEYYDTERGVKYDSASFYF
>NZ_ALQT01000013.1|WP_000934859.1|134412_135192_+|hypothetical-protein
MLNSDFIISKSLANYIHHRRLEVGVSSTDLAEISNMSKSDWESFEKNGGAIPLKSKDIILDLLFLERFPKEKECDFIDKLFEEAKENKLWPEKIYQTMGLTPALSFIAGCEILSDDINNDLEELSKLPKESHLGQLDTSLLLSLLPQQFITKYDYEFVYKLSKVLAQYTSRNKVGSSYTAHNVIEEICLYLIAKESILYFESLDENSHLQLKELLDYNDEWPFDIFDDMDSYTFLYTDIYIEEDSPYHFKNWFVPQFYL
>NZ_ALQT01000013.1|WP_000032189.1|135409_138061_-|valine--tRNA-ligase
MSKELSPKYNPAEVEAGRYQTWLDQDVFKPSGDAEAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLREQGISRYDLGREKFLDKVWEWKDEYAATIKSQWGKMGLSVDYSRERFTLDEGLSKAVRKVFVDLYNRGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALEVATTRPETMFGDVAVAVNPEDPRYKDLIGQNVILPIINKPIPIVADEHADPEFGTGVVKITPAHDPNDFAVGQRHNLPQVNVMNDDGTMNELADEFNGMDRFEARKAVVAKLESLGNLVKIEKMTHSVGHSERTGVVVEPRLSTQWFVKMDQLAKNAIANQDTEDKVEFYPPRFNDTFMSWMENVHDWVISRQLWWGHQIPAWYNVNGEMYVGEDAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPDTEAADFKRYFPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFSNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWNFINKIWNISRYILMNNEGLTLDQARENVEKVVNSQVGNVTDRWILHNLNETVGKITENFDKFEFGVAGHILYNFIWEEFANWYVELTKEVLYSDNEDEKVVTRSVLLYTLDQILRLLHPIMPFVTEEIFGQYAEGSIVLASYPQVNATFENQTAHKGVESLKDLIRSVRNSRAEVNVAPSKPITILVKTSDSELESFFKDNSNYIKRFTNPETLEISSAIATPELAMSSVITGAEIFLPLADLLNVEEELARLEKELAKWQKELDMVGKKLSNERFVANAKPEVVQKEKDKQADYQAKYDATQERIVEMQKLVK
>NZ_ALQT01000013.1|WP_000997618.1|138082_138775_-|hypothetical-protein
MNDFFNWLITLYNDDKVAFVSLCLTLVFGFFSWLAQLKRNKQDDIRQAEQDEFNRLAQDELKEFQSFQKKFAEYQQKVSELQFNFESQENFKPYFEFSKTKSSTYVEEGKLIARICLTNVGRGTATKITTNPIDYDQDGNPMYFRTIPTKQTHAIYDYFSETFAIPNDSIFLSTTALEQTENQNHCIEFKIKFCDSSGRTYEQKFEFGYDNFLVRGINLKSVTYEPTLIK

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_ALQT01000013_1	1.11\|125159\|33\|NZ_ALQT01000013\|CRT,PILER-CR,CRISPRCasFinder	125159-125191	33	NZ_ALQT01000015.1	133309-133341	0	1.0

1. spacer 1.11|125159|33|NZ_ALQT01000013|CRT,PILER-CR,CRISPRCasFinder matches to position: 133309-133341, mismatch: 0, identity: 1.0

gtgcaataacgattgattcttcattgatagttg	CRISPR spacer
gtgcaataacgattgattcttcattgatagttg	Protospacer
*********************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_ALQT01000013_1	1.3\|124628\|35\|NZ_ALQT01000013\|CRT,PILER-CR,CRISPRCasFinder	124628-124662	35	MK448768	Streptococcus phage Javan47, complete genome	34297-34331	0	1.0
NZ_ALQT01000013_1	1.6\|124828\|34\|NZ_ALQT01000013\|CRT,PILER-CR,CRISPRCasFinder	124828-124861	34	MK448932	Streptococcus phage Javan42, complete genome	35042-35075	0	1.0
NZ_ALQT01000013_1	1.9\|125026\|35\|NZ_ALQT01000013\|CRT,PILER-CR,CRISPRCasFinder	125026-125060	35	MK448796	Streptococcus phage Javan53, complete genome	31059-31093	0	1.0
NZ_ALQT01000013_1	1.4\|124695\|34\|NZ_ALQT01000013\|CRT,PILER-CR,CRISPRCasFinder	124695-124728	34	MK448851	Streptococcus phage Javan14, complete genome	34030-34063	1	0.971
NZ_ALQT01000013_1	1.4\|124695\|34\|NZ_ALQT01000013\|CRT,PILER-CR,CRISPRCasFinder	124695-124728	34	MK448796	Streptococcus phage Javan53, complete genome	38885-38918	3	0.912
NZ_ALQT01000013_1	1.4\|124695\|34\|NZ_ALQT01000013\|CRT,PILER-CR,CRISPRCasFinder	124695-124728	34	MK448742	Streptococcus phage Javan37, complete genome	30083-30116	3	0.912
NZ_ALQT01000013_1	1.6\|124828\|34\|NZ_ALQT01000013\|CRT,PILER-CR,CRISPRCasFinder	124828-124861	34	MK449012	Streptococcus phage Javan94, complete genome	33617-33650	3	0.912
NZ_ALQT01000013_1	1.1\|124498\|32\|NZ_ALQT01000013\|CRT	124498-124529	32	NZ_MG205643	Paeniclostridium sordellii strain S0804018 plasmid pCS1-5, complete sequence	72996-73027	5	0.844
NZ_ALQT01000013_1	1.1\|124498\|32\|NZ_ALQT01000013\|CRT	124498-124529	32	NZ_LR214986	Mycoplasma cynos strain NCTC10142 plasmid 13	548430-548461	6	0.812
NZ_ALQT01000013_1	1.1\|124498\|32\|NZ_ALQT01000013\|CRT	124498-124529	32	NZ_CP038623	Arsenophonus nasoniae strain FIN plasmid pArsFIN11, complete sequence	39364-39395	6	0.812
NZ_ALQT01000013_1	1.1\|124498\|32\|NZ_ALQT01000013\|CRT	124498-124529	32	NC_017421	Borreliella burgdorferi N40 plasmid N40_lp38, complete sequence	28345-28376	6	0.812
NZ_ALQT01000013_1	1.1\|124498\|32\|NZ_ALQT01000013\|CRT	124498-124529	32	NC_001856	Borreliella burgdorferi B31 plasmid lp38, complete sequence	28055-28086	6	0.812
NZ_ALQT01000013_1	1.1\|124498\|32\|NZ_ALQT01000013\|CRT	124498-124529	32	NZ_CP019853	Borreliella burgdorferi plasmid lp38, complete sequence	28068-28099	6	0.812
NZ_ALQT01000013_1	1.1\|124498\|32\|NZ_ALQT01000013\|CRT	124498-124529	32	NZ_CP019764	Borreliella burgdorferi strain B31_NRZ isolate B31 plasmid p_lp38, complete sequence	28061-28092	6	0.812
NZ_ALQT01000013_1	1.7\|124894\|34\|NZ_ALQT01000013\|CRT,PILER-CR,CRISPRCasFinder	124894-124927	34	NC_022111	Prevotella sp. oral taxon 299 str. F0039 plasmid, complete sequence	606095-606128	6	0.824
NZ_ALQT01000013_1	1.1\|124498\|32\|NZ_ALQT01000013\|CRT	124498-124529	32	NC_014633	Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequence	484591-484622	7	0.781
NZ_ALQT01000013_1	1.1\|124498\|32\|NZ_ALQT01000013\|CRT	124498-124529	32	AP014284	Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S23-C63, * SEQUENCING IN PROGRESS *	9262-9293	7	0.781
NZ_ALQT01000013_1	1.1\|124498\|32\|NZ_ALQT01000013\|CRT	124498-124529	32	NZ_CP014152	Clostridium botulinum strain BrDura plasmid pRSJ20_1, complete sequence	46517-46548	7	0.781
NZ_ALQT01000013_1	1.1\|124498\|32\|NZ_ALQT01000013\|CRT	124498-124529	32	NZ_CP006909	Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence	131643-131674	7	0.781
NZ_ALQT01000013_1	1.1\|124498\|32\|NZ_ALQT01000013\|CRT	124498-124529	32	NZ_CP013684	Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence	15273-15304	7	0.781
NZ_ALQT01000013_1	1.1\|124498\|32\|NZ_ALQT01000013\|CRT	124498-124529	32	NZ_CP013710	Clostridium botulinum strain F634 plasmid pRSJ2_3, complete sequence	232837-232868	7	0.781
NZ_ALQT01000013_1	1.1\|124498\|32\|NZ_ALQT01000013\|CRT	124498-124529	32	NC_010379	Clostridium botulinum B1 str. Okra plasmid pCLD, complete sequence	25057-25088	7	0.781
NZ_ALQT01000013_1	1.1\|124498\|32\|NZ_ALQT01000013\|CRT	124498-124529	32	NC_010418	Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence	158727-158758	7	0.781
NZ_ALQT01000013_1	1.1\|124498\|32\|NZ_ALQT01000013\|CRT	124498-124529	32	NZ_CP013700	Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence	158558-158589	7	0.781
NZ_ALQT01000013_1	1.1\|124498\|32\|NZ_ALQT01000013\|CRT	124498-124529	32	NC_025146	Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111	1638-1669	7	0.781
NZ_ALQT01000013_1	1.1\|124498\|32\|NZ_ALQT01000013\|CRT	124498-124529	32	NC_020380	Bacillus thuringiensis serovar thuringiensis str. IS5056 plasmid pIS56-16, complete sequence	13185-13216	7	0.781
NZ_ALQT01000013_1	1.1\|124498\|32\|NZ_ALQT01000013\|CRT	124498-124529	32	MH517022	Acinetobacter phage SH-Ab 15599, complete genome	51037-51068	7	0.781
NZ_ALQT01000013_1	1.1\|124498\|32\|NZ_ALQT01000013\|CRT	124498-124529	32	MK496784	Capybara microvirus Cap3_SP_414, complete genome	2372-2403	7	0.781
NZ_ALQT01000013_1	1.1\|124498\|32\|NZ_ALQT01000013\|CRT	124498-124529	32	U72945	Virus-like particle CAK1 of Clostridium beijerinckii origin of replication region	829-860	7	0.781
NZ_ALQT01000013_1	1.1\|124498\|32\|NZ_ALQT01000013\|CRT	124498-124529	32	NZ_CP029456	Bacillus cereus strain FORC087 plasmid pFORC087.2, complete sequence	61423-61454	8	0.75
NZ_ALQT01000013_1	1.1\|124498\|32\|NZ_ALQT01000013\|CRT	124498-124529	32	NZ_CP022660	Salmonella enterica subsp. enterica strain RM11060 plasmid pRM11060-2, complete sequence	70696-70727	8	0.75
NZ_ALQT01000013_1	1.1\|124498\|32\|NZ_ALQT01000013\|CRT	124498-124529	32	CP016196	Bacillus thuringiensis serovar coreanensis strain ST7 plasmid pST7-2, complete sequence	62259-62290	8	0.75
NZ_ALQT01000013_1	1.1\|124498\|32\|NZ_ALQT01000013\|CRT	124498-124529	32	NZ_CP045061	Salmonella enterica subsp. enterica serovar Muenchen strain LG26 plasmid pLG26p2, complete sequence	70700-70731	8	0.75
NZ_ALQT01000013_1	1.1\|124498\|32\|NZ_ALQT01000013\|CRT	124498-124529	32	NZ_CP045054	Salmonella enterica subsp. enterica serovar Muenchen strain LG24 plasmid pLG24p2, complete sequence	70707-70738	8	0.75
NZ_ALQT01000013_1	1.1\|124498\|32\|NZ_ALQT01000013\|CRT	124498-124529	32	NZ_CP045058	Salmonella enterica subsp. enterica serovar Muenchen strain LG25 plasmid pLG25p2, complete sequence	70706-70737	8	0.75
NZ_ALQT01000013_1	1.1\|124498\|32\|NZ_ALQT01000013\|CRT	124498-124529	32	MH830339	Proteus phage Stubb, complete genome	26806-26837	8	0.75
NZ_ALQT01000013_1	1.1\|124498\|32\|NZ_ALQT01000013\|CRT	124498-124529	32	MG030347	Proteus phage PM135, complete genome	76557-76588	8	0.75
NZ_ALQT01000013_1	1.1\|124498\|32\|NZ_ALQT01000013\|CRT	124498-124529	32	MN935203	UNVERIFIED: Proteus phage VTCCBPA139, partial genome	26007-26038	8	0.75
NZ_ALQT01000013_1	1.2\|124562\|34\|NZ_ALQT01000013\|CRT,PILER-CR,CRISPRCasFinder	124562-124595	34	NZ_MH569712	Serratia marcescens strain S120 plasmid pPM120-2, complete sequence	42532-42565	8	0.765
NZ_ALQT01000013_1	1.7\|124894\|34\|NZ_ALQT01000013\|CRT,PILER-CR,CRISPRCasFinder	124894-124927	34	NZ_LR214939	Mycoplasma salivarium strain NCTC10113 plasmid 2	617393-617426	8	0.765
NZ_ALQT01000013_1	1.7\|124894\|34\|NZ_ALQT01000013\|CRT,PILER-CR,CRISPRCasFinder	124894-124927	34	NZ_CP030933	Enterococcus gilvus strain CR1 plasmid pCR1A, complete sequence	378878-378911	8	0.765
NZ_ALQT01000013_1	1.7\|124894\|34\|NZ_ALQT01000013\|CRT,PILER-CR,CRISPRCasFinder	124894-124927	34	NC_015901	Lactococcus lactis subsp. lactis bv. diacetylactis plasmid pVF22, complete sequence	18325-18358	8	0.765
NZ_ALQT01000013_1	1.1\|124498\|32\|NZ_ALQT01000013\|CRT	124498-124529	32	NC_007103	Bacillus cereus E33L plasmid pE33L466, complete sequence	93170-93201	9	0.719
NZ_ALQT01000013_1	1.1\|124498\|32\|NZ_ALQT01000013\|CRT	124498-124529	32	NZ_CP009967	Bacillus cereus E33L plasmid pBCO_1, complete sequence	228972-229003	9	0.719
NZ_ALQT01000013_1	1.1\|124498\|32\|NZ_ALQT01000013\|CRT	124498-124529	32	NZ_MG205643	Paeniclostridium sordellii strain S0804018 plasmid pCS1-5, complete sequence	9883-9914	9	0.719
NZ_ALQT01000013_1	1.1\|124498\|32\|NZ_ALQT01000013\|CRT	124498-124529	32	NZ_AP017932	Lactobacillus sakei strain LK-145 plasmid pLs145-a, complete sequence	5632-5663	9	0.719
NZ_ALQT01000013_1	1.1\|124498\|32\|NZ_ALQT01000013\|CRT	124498-124529	32	NZ_CP025208	Lactobacillus sakei strain WiKim0074 plasmid pLSW74_2, complete sequence	12385-12416	9	0.719
NZ_ALQT01000013_1	1.1\|124498\|32\|NZ_ALQT01000013\|CRT	124498-124529	32	NZ_CP021933	Lactobacillus plantarum strain TMW 1.1478 plasmid pL11478-1, complete sequence	57054-57085	9	0.719
NZ_ALQT01000013_1	1.1\|124498\|32\|NZ_ALQT01000013\|CRT	124498-124529	32	NZ_CP017376	Lactobacillus plantarum strain TMW 1.708 plasmid pL1708-2, complete sequence	17183-17214	9	0.719
NZ_ALQT01000013_1	1.1\|124498\|32\|NZ_ALQT01000013\|CRT	124498-124529	32	NZ_CP021472	Pediococcus pentosaceus strain SRCM100892 plasmid pPC892-2, complete sequence	18052-18083	9	0.719
NZ_ALQT01000013_1	1.1\|124498\|32\|NZ_ALQT01000013\|CRT	124498-124529	32	NZ_CP052067	Lactobacillus paracasei strain 347-16 plasmid unnamed2, complete sequence	1046-1077	9	0.719
NZ_ALQT01000013_1	1.1\|124498\|32\|NZ_ALQT01000013\|CRT	124498-124529	32	NZ_CP031209	Lactobacillus brevis strain UCCLB521 plasmid pUCCLB521_A, complete sequence	42073-42104	9	0.719
NZ_ALQT01000013_1	1.1\|124498\|32\|NZ_ALQT01000013\|CRT	124498-124529	32	NZ_CP035015	Lactobacillus plantarum strain 12_3 plasmid pldC, complete sequence	24116-24147	9	0.719
NZ_ALQT01000013_1	1.1\|124498\|32\|NZ_ALQT01000013\|CRT	124498-124529	32	NC_003383	Listeria innocua Clip11262 plasmid pLI100, complete sequence	34563-34594	9	0.719
NZ_ALQT01000013_1	1.1\|124498\|32\|NZ_ALQT01000013\|CRT	124498-124529	32	NZ_CP048005	Lactobacillus paracasei strain CACC 566 plasmid p2CACC566, complete sequence	41814-41845	9	0.719
NZ_ALQT01000013_1	1.1\|124498\|32\|NZ_ALQT01000013\|CRT	124498-124529	32	NZ_CP046038	Lactobacillus sakei strain CBA3614 plasmid unnamed1, complete sequence	31384-31415	9	0.719
NZ_ALQT01000013_1	1.1\|124498\|32\|NZ_ALQT01000013\|CRT	124498-124529	32	NZ_CP017410	Lactobacillus plantarum strain RI-113 plasmid pRI113_4, complete sequence	12201-12232	9	0.719
NZ_ALQT01000013_1	1.1\|124498\|32\|NZ_ALQT01000013\|CRT	124498-124529	32	NC_016608	Pediococcus claussenii ATCC BAA-344 plasmid pPECL-5, complete sequence	15266-15297	9	0.719
NZ_ALQT01000013_1	1.1\|124498\|32\|NZ_ALQT01000013\|CRT	124498-124529	32	NZ_CP029967	Lactobacillus curvatus strain ZJUNIT8 plasmid pnunamed1, complete sequence	42716-42747	9	0.719
NZ_ALQT01000013_1	1.1\|124498\|32\|NZ_ALQT01000013\|CRT	124498-124529	32	NZ_CP028336	Lactobacillus plantarum strain SRCM101167 plasmid unnamed2, complete sequence	38185-38216	9	0.719
NZ_ALQT01000013_1	1.1\|124498\|32\|NZ_ALQT01000013\|CRT	124498-124529	32	NZ_CP028231	Lactobacillus plantarum strain SRCM101222 plasmid unnamed2, complete sequence	3683-3714	9	0.719
NZ_ALQT01000013_1	1.1\|124498\|32\|NZ_ALQT01000013\|CRT	124498-124529	32	NZ_CP018183	Lactobacillus nagelii strain TMW 1.1827 plasmid pL11827-3, complete sequence	17219-17250	9	0.719
NZ_ALQT01000013_1	1.1\|124498\|32\|NZ_ALQT01000013\|CRT	124498-124529	32	MH937473	Streptococcus phage CHPC929, complete genome	34811-34842	9	0.719
NZ_ALQT01000013_1	1.1\|124498\|32\|NZ_ALQT01000013\|CRT	124498-124529	32	NC_010353	Streptococcus phage 858, complete genome	33013-33044	9	0.719
NZ_ALQT01000013_1	1.7\|124894\|34\|NZ_ALQT01000013\|CRT,PILER-CR,CRISPRCasFinder	124894-124927	34	NZ_CP013615	Clostridium perfringens strain JP838 plasmid pJFP838A, complete sequence	243737-243770	9	0.735
NZ_ALQT01000013_1	1.1\|124498\|32\|NZ_ALQT01000013\|CRT	124498-124529	32	NZ_CP015507	Bacillus oceanisediminis 2691 plasmid pBO1, complete sequence	161310-161341	10	0.688
NZ_ALQT01000013_1	1.2\|124562\|34\|NZ_ALQT01000013\|CRT,PILER-CR,CRISPRCasFinder	124562-124595	34	CP029330	Clostridium beijerinckii isolate WB53 plasmid unnamed1	3102-3135	10	0.706
NZ_ALQT01000013_1	1.2\|124562\|34\|NZ_ALQT01000013\|CRT,PILER-CR,CRISPRCasFinder	124562-124595	34	CP029330	Clostridium beijerinckii isolate WB53 plasmid unnamed1	17601-17634	10	0.706
NZ_ALQT01000013_1	1.1\|124498\|32\|NZ_ALQT01000013\|CRT	124498-124529	32	NZ_CP031220	Arcobacter mytili LMG 24559 plasmid pAMYT, complete sequence	90370-90401	11	0.656
NZ_ALQT01000013_1	1.7\|124894\|34\|NZ_ALQT01000013\|CRT,PILER-CR,CRISPRCasFinder	124894-124927	34	NC_013792	Bacillus pseudofirmus OF4 plasmid pBpOF4-01, complete sequence	238853-238886	11	0.676

1. spacer 1.3|124628|35|NZ_ALQT01000013|CRT,PILER-CR,CRISPRCasFinder matches to MK448768 (Streptococcus phage Javan47, complete genome) position: , mismatch: 0, identity: 1.0

aaaacggatggttgtatattgcaggctatcagcta	CRISPR spacer
aaaacggatggttgtatattgcaggctatcagcta	Protospacer
***********************************

2. spacer 1.6|124828|34|NZ_ALQT01000013|CRT,PILER-CR,CRISPRCasFinder matches to MK448932 (Streptococcus phage Javan42, complete genome) position: , mismatch: 0, identity: 1.0

tttggctgtttgagtagctcgttgacttttgcct	CRISPR spacer
tttggctgtttgagtagctcgttgacttttgcct	Protospacer
**********************************

3. spacer 1.9|125026|35|NZ_ALQT01000013|CRT,PILER-CR,CRISPRCasFinder matches to MK448796 (Streptococcus phage Javan53, complete genome) position: , mismatch: 0, identity: 1.0

gtcttttcagacagaacataaatggaaatatagta	CRISPR spacer
gtcttttcagacagaacataaatggaaatatagta	Protospacer
***********************************

4. spacer 1.4|124695|34|NZ_ALQT01000013|CRT,PILER-CR,CRISPRCasFinder matches to MK448851 (Streptococcus phage Javan14, complete genome) position: , mismatch: 1, identity: 0.971

tgatctaattagtgatatgctacgtctttacgac	CRISPR spacer
tgatttaattagtgatatgctacgtctttacgac	Protospacer
****.*****************************

5. spacer 1.4|124695|34|NZ_ALQT01000013|CRT,PILER-CR,CRISPRCasFinder matches to MK448796 (Streptococcus phage Javan53, complete genome) position: , mismatch: 3, identity: 0.912

tgatctaattagtgatatgctacgtctttacgac	CRISPR spacer
tgacttaattagtgatatgctacgtctttacgat	Protospacer
***..****************************.

6. spacer 1.4|124695|34|NZ_ALQT01000013|CRT,PILER-CR,CRISPRCasFinder matches to MK448742 (Streptococcus phage Javan37, complete genome) position: , mismatch: 3, identity: 0.912

tgatctaattagtgatatgctacgtctttacgac	CRISPR spacer
cgacttaattagtgatatgctacgtctttacgac	Protospacer
.**..*****************************

7. spacer 1.6|124828|34|NZ_ALQT01000013|CRT,PILER-CR,CRISPRCasFinder matches to MK449012 (Streptococcus phage Javan94, complete genome) position: , mismatch: 3, identity: 0.912

tttggctgtttgagtagctcgttgacttttgcct	CRISPR spacer
tgtggttgtttgagtagctcgttgacttttgctt	Protospacer
* ***.**************************.*

8. spacer 1.1|124498|32|NZ_ALQT01000013|CRT matches to NZ_MG205643 (Paeniclostridium sordellii strain S0804018 plasmid pCS1-5, complete sequence) position: , mismatch: 5, identity: 0.844

ataatgaattaataaaaaaataat-cattatta	CRISPR spacer
ataatgaatttatataaaaataatacagtttt-	Protospacer
********** *** ********* ** * **

9. spacer 1.1|124498|32|NZ_ALQT01000013|CRT matches to NZ_LR214986 (Mycoplasma cynos strain NCTC10142 plasmid 13) position: , mismatch: 6, identity: 0.812

ataatgaattaataaaaaaataatcattatta	CRISPR spacer
aaaatttgctaataaaaaaataatcattaata	Protospacer
* ***  ..******************** **

10. spacer 1.1|124498|32|NZ_ALQT01000013|CRT matches to NZ_CP038623 (Arsenophonus nasoniae strain FIN plasmid pArsFIN11, complete sequence) position: , mismatch: 6, identity: 0.812

ataatgaattaataaaaaaataatcattatta	CRISPR spacer
attatatgttaataactaaataatcattatta	Protospacer
** **. .*******  ***************

11. spacer 1.1|124498|32|NZ_ALQT01000013|CRT matches to NC_017421 (Borreliella burgdorferi N40 plasmid N40_lp38, complete sequence) position: , mismatch: 6, identity: 0.812

ataatgaattaataaaaaaataatca-ttatta	CRISPR spacer
ataatgaataactaaaaaaataaggaggtatt-	Protospacer
********* * ***********  *  ****

12. spacer 1.1|124498|32|NZ_ALQT01000013|CRT matches to NC_001856 (Borreliella burgdorferi B31 plasmid lp38, complete sequence) position: , mismatch: 6, identity: 0.812

ataatgaattaataaaaaaataatca-ttatta	CRISPR spacer
ataatgaataactaaaaaaataaggaggtatt-	Protospacer
********* * ***********  *  ****

13. spacer 1.1|124498|32|NZ_ALQT01000013|CRT matches to NZ_CP019853 (Borreliella burgdorferi plasmid lp38, complete sequence) position: , mismatch: 6, identity: 0.812

ataatgaattaataaaaaaataatca-ttatta	CRISPR spacer
ataatgaataactaaaaaaataaggaggtatt-	Protospacer
********* * ***********  *  ****

14. spacer 1.1|124498|32|NZ_ALQT01000013|CRT matches to NZ_CP019764 (Borreliella burgdorferi strain B31_NRZ isolate B31 plasmid p_lp38, complete sequence) position: , mismatch: 6, identity: 0.812

ataatgaattaataaaaaaataatca-ttatta	CRISPR spacer
ataatgaataactaaaaaaataaggaggtatt-	Protospacer
********* * ***********  *  ****

15. spacer 1.7|124894|34|NZ_ALQT01000013|CRT,PILER-CR,CRISPRCasFinder matches to NC_022111 (Prevotella sp. oral taxon 299 str. F0039 plasmid, complete sequence) position: , mismatch: 6, identity: 0.824

-ataattatggtagtcttatttttaatataaaata	CRISPR spacer
cattcttat-ttattcttattttcaatataaaata	Protospacer
 **  ****  ** *********.***********

16. spacer 1.1|124498|32|NZ_ALQT01000013|CRT matches to NC_014633 (Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequence) position: , mismatch: 7, identity: 0.781

-ataatgaattaataaaaaaataatcattatta	CRISPR spacer
tataa-atattaataaaaaacaaatcattatct	Protospacer
 **** . ************  *********.

17. spacer 1.1|124498|32|NZ_ALQT01000013|CRT matches to AP014284 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S23-C63, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 7, identity: 0.781

ataatgaattaataaaaaaataatcattatta	CRISPR spacer
atccagaattaataaaaaaaaaattattagaa	Protospacer
**   *************** ***.****  *

18. spacer 1.1|124498|32|NZ_ALQT01000013|CRT matches to NZ_CP014152 (Clostridium botulinum strain BrDura plasmid pRSJ20_1, complete sequence) position: , mismatch: 7, identity: 0.781

ataatgaattaataaaaaaataatcat-tatta	CRISPR spacer
ctaatgaattaataaaaaaggaattttatact-	Protospacer
 ******************. ***. * **.*

19. spacer 1.1|124498|32|NZ_ALQT01000013|CRT matches to NZ_CP006909 (Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence) position: , mismatch: 7, identity: 0.781

ataatgaattaataaaaaaataatcat-tatta	CRISPR spacer
ctaatgaattaataaaaaaggaattttatact-	Protospacer
 ******************. ***. * **.*

20. spacer 1.1|124498|32|NZ_ALQT01000013|CRT matches to NZ_CP013684 (Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence) position: , mismatch: 7, identity: 0.781

ataatgaattaataaaaaaataatcat-tatta	CRISPR spacer
ctaatgaattaataaaaaagaaattttatact-	Protospacer
 ******************. ***. * **.*

21. spacer 1.1|124498|32|NZ_ALQT01000013|CRT matches to NZ_CP013710 (Clostridium botulinum strain F634 plasmid pRSJ2_3, complete sequence) position: , mismatch: 7, identity: 0.781

ataatgaattaataaaaaaataatcat-tatta	CRISPR spacer
ctaatgaattaataaaaaaggaattttatact-	Protospacer
 ******************. ***. * **.*

22. spacer 1.1|124498|32|NZ_ALQT01000013|CRT matches to NC_010379 (Clostridium botulinum B1 str. Okra plasmid pCLD, complete sequence) position: , mismatch: 7, identity: 0.781

ataatgaattaataaaaaaataatcat-tatta	CRISPR spacer
ctaatgaattaataaaaaaggaattttatact-	Protospacer
 ******************. ***. * **.*

23. spacer 1.1|124498|32|NZ_ALQT01000013|CRT matches to NC_010418 (Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence) position: , mismatch: 7, identity: 0.781

ataatgaattaataaaaaaataatcat-tatta	CRISPR spacer
ctaatgaattaataaaaaaggaattttatact-	Protospacer
 ******************. ***. * **.*

24. spacer 1.1|124498|32|NZ_ALQT01000013|CRT matches to NZ_CP013700 (Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence) position: , mismatch: 7, identity: 0.781

ataatgaattaataaaaaaataatcat-tatta	CRISPR spacer
ctaatgaattaataaaaaagaaattttatact-	Protospacer
 ******************. ***. * **.*

25. spacer 1.1|124498|32|NZ_ALQT01000013|CRT matches to NC_025146 (Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111) position: , mismatch: 7, identity: 0.781

ataatgaattaataaaaaaataatcat-tatta	CRISPR spacer
ctaatgaattaataaaaaaggaattttatact-	Protospacer
 ******************. ***. * **.*

26. spacer 1.1|124498|32|NZ_ALQT01000013|CRT matches to NC_020380 (Bacillus thuringiensis serovar thuringiensis str. IS5056 plasmid pIS56-16, complete sequence) position: , mismatch: 7, identity: 0.781

ataatgaattaataaaaaaataatcattatta--	CRISPR spacer
ataaataattaataaaaaaataa--aacactacg	Protospacer
****  *****************  * .*.**

27. spacer 1.1|124498|32|NZ_ALQT01000013|CRT matches to MH517022 (Acinetobacter phage SH-Ab 15599, complete genome) position: , mismatch: 7, identity: 0.781

ataatgaat--taataaaaaaataatcattatta	CRISPR spacer
--gacgtattataatagaaaaataatcactatta	Protospacer
  .*.* **  *****.***********.*****

28. spacer 1.1|124498|32|NZ_ALQT01000013|CRT matches to MK496784 (Capybara microvirus Cap3_SP_414, complete genome) position: , mismatch: 7, identity: 0.781

ataatg-aattaataaaaaaataatcattatta	CRISPR spacer
-tatcgtaattaataaaaaaatcattattacga	Protospacer
 ** .* *************** **.****. *

29. spacer 1.1|124498|32|NZ_ALQT01000013|CRT matches to U72945 (Virus-like particle CAK1 of Clostridium beijerinckii origin of replication region) position: , mismatch: 7, identity: 0.781

ataatgaattaataaaaaaataatcattatta-	CRISPR spacer
ttaaacaattaataaaaaaataatt-ttatgga	Protospacer
 ***  ******************. **** .

30. spacer 1.1|124498|32|NZ_ALQT01000013|CRT matches to NZ_CP029456 (Bacillus cereus strain FORC087 plasmid pFORC087.2, complete sequence) position: , mismatch: 8, identity: 0.75

ataatgaattaataaaaaaataat-cattatta	CRISPR spacer
gaaattaattaatagaaaaataatccaatgct-	Protospacer
. *** ********.********* ** *..*

31. spacer 1.1|124498|32|NZ_ALQT01000013|CRT matches to NZ_CP022660 (Salmonella enterica subsp. enterica strain RM11060 plasmid pRM11060-2, complete sequence) position: , mismatch: 8, identity: 0.75

ataatgaattaataaaaaaataatcattatta	CRISPR spacer
ttaataaattaatgaaaaaataatattaacaa	Protospacer
 ****.*******.**********  * *. *

32. spacer 1.1|124498|32|NZ_ALQT01000013|CRT matches to CP016196 (Bacillus thuringiensis serovar coreanensis strain ST7 plasmid pST7-2, complete sequence) position: , mismatch: 8, identity: 0.75

ataatgaattaataaaaaaataatcattatta	CRISPR spacer
ttaataaactaataaaaaaataataaaatata	Protospacer
 ****.**.*************** *    **

33. spacer 1.1|124498|32|NZ_ALQT01000013|CRT matches to NZ_CP045061 (Salmonella enterica subsp. enterica serovar Muenchen strain LG26 plasmid pLG26p2, complete sequence) position: , mismatch: 8, identity: 0.75

ataatgaattaataaaaaaataatcattatta	CRISPR spacer
ttaataaattaatgaaaaaataatattaacaa	Protospacer
 ****.*******.**********  * *. *

34. spacer 1.1|124498|32|NZ_ALQT01000013|CRT matches to NZ_CP045054 (Salmonella enterica subsp. enterica serovar Muenchen strain LG24 plasmid pLG24p2, complete sequence) position: , mismatch: 8, identity: 0.75

ataatgaattaataaaaaaataatcattatta	CRISPR spacer
ttaataaattaatgaaaaaataatattaacaa	Protospacer
 ****.*******.**********  * *. *

35. spacer 1.1|124498|32|NZ_ALQT01000013|CRT matches to NZ_CP045058 (Salmonella enterica subsp. enterica serovar Muenchen strain LG25 plasmid pLG25p2, complete sequence) position: , mismatch: 8, identity: 0.75

ataatgaattaataaaaaaataatcattatta	CRISPR spacer
ttaataaattaatgaaaaaataatattaacaa	Protospacer
 ****.*******.**********  * *. *

36. spacer 1.1|124498|32|NZ_ALQT01000013|CRT matches to MH830339 (Proteus phage Stubb, complete genome) position: , mismatch: 8, identity: 0.75

ataatga-----attaataaaaaaataatcattatta	CRISPR spacer
-----gagcattattaataaataaataatcataataa	Protospacer
     **     ********* ********** ** *

37. spacer 1.1|124498|32|NZ_ALQT01000013|CRT matches to MG030347 (Proteus phage PM135, complete genome) position: , mismatch: 8, identity: 0.75

ataatga-----attaataaaaaaataatcattatta	CRISPR spacer
-----gagcattattaataaataaataatcataataa	Protospacer
     **     ********* ********** ** *

38. spacer 1.1|124498|32|NZ_ALQT01000013|CRT matches to MN935203 (UNVERIFIED: Proteus phage VTCCBPA139, partial genome) position: , mismatch: 8, identity: 0.75

ataatga-----attaataaaaaaataatcattatta	CRISPR spacer
-----gagcattattaataaataaataatcataataa	Protospacer
     **     ********* ********** ** *

39. spacer 1.2|124562|34|NZ_ALQT01000013|CRT,PILER-CR,CRISPRCasFinder matches to NZ_MH569712 (Serratia marcescens strain S120 plasmid pPM120-2, complete sequence) position: , mismatch: 8, identity: 0.765

gcgttgatatgaaaggaaattatag-agatatgat	CRISPR spacer
tcgttgatctaaaaggaaattatagcactcataa-	Protospacer
 ******* *.************** *  .**.*

40. spacer 1.7|124894|34|NZ_ALQT01000013|CRT,PILER-CR,CRISPRCasFinder matches to NZ_LR214939 (Mycoplasma salivarium strain NCTC10113 plasmid 2) position: , mismatch: 8, identity: 0.765

ataattatggtagtcttatttttaatataaaata	CRISPR spacer
acaaaaatgttagtcttatgtttaatataaacac	Protospacer
*.**  *** ********* ***********

41. spacer 1.7|124894|34|NZ_ALQT01000013|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP030933 (Enterococcus gilvus strain CR1 plasmid pCR1A, complete sequence) position: , mismatch: 8, identity: 0.765

ataattatggtagtcttatttttaatataaaata-	CRISPR spacer
aaaattaaagtagtcttatttttaat-cattttac	Protospacer
* ***** .***************** .*   **

42. spacer 1.7|124894|34|NZ_ALQT01000013|CRT,PILER-CR,CRISPRCasFinder matches to NC_015901 (Lactococcus lactis subsp. lactis bv. diacetylactis plasmid pVF22, complete sequence) position: , mismatch: 8, identity: 0.765

ataattatggtagtcttatttttaatataaaata	CRISPR spacer
taatttctattattctaatttttaatataaaata	Protospacer
  * ** *. ** *** *****************

43. spacer 1.1|124498|32|NZ_ALQT01000013|CRT matches to NC_007103 (Bacillus cereus E33L plasmid pE33L466, complete sequence) position: , mismatch: 9, identity: 0.719

ataatgaattaataaaaaaataatcattatta	CRISPR spacer
ataatgaatttataaaaaaataaatttaggag	Protospacer
********** ************ . * .  .

44. spacer 1.1|124498|32|NZ_ALQT01000013|CRT matches to NZ_CP009967 (Bacillus cereus E33L plasmid pBCO_1, complete sequence) position: , mismatch: 9, identity: 0.719

ataatgaattaataaaaaaataatcattatta	CRISPR spacer
ataatgaatttataaaaaaataaatttaggag	Protospacer
********** ************ . * .  .

45. spacer 1.1|124498|32|NZ_ALQT01000013|CRT matches to NZ_MG205643 (Paeniclostridium sordellii strain S0804018 plasmid pCS1-5, complete sequence) position: , mismatch: 9, identity: 0.719

ataatgaattaataaaaaaataatcattatta	CRISPR spacer
caaaactattaatataaaagtaatcattatct	Protospacer
  **   ******* ****.**********.

46. spacer 1.1|124498|32|NZ_ALQT01000013|CRT matches to NZ_AP017932 (Lactobacillus sakei strain LK-145 plasmid pLs145-a, complete sequence) position: , mismatch: 9, identity: 0.719

ataatgaattaataaaaaaataatcattatta	CRISPR spacer
aacccaatttaataaaaaaacaatgattattg	Protospacer
*   ..* ************.*** ******.

47. spacer 1.1|124498|32|NZ_ALQT01000013|CRT matches to NZ_CP025208 (Lactobacillus sakei strain WiKim0074 plasmid pLSW74_2, complete sequence) position: , mismatch: 9, identity: 0.719

ataatgaattaataaaaaaataatcattatta	CRISPR spacer
aacccaatttaataaaaaaacaatgattattg	Protospacer
*   ..* ************.*** ******.

48. spacer 1.1|124498|32|NZ_ALQT01000013|CRT matches to NZ_CP021933 (Lactobacillus plantarum strain TMW 1.1478 plasmid pL11478-1, complete sequence) position: , mismatch: 9, identity: 0.719

ataatgaattaataaaaaaataatcattatta	CRISPR spacer
aacccaatttaataaaaaaacaatgattattg	Protospacer
*   ..* ************.*** ******.

49. spacer 1.1|124498|32|NZ_ALQT01000013|CRT matches to NZ_CP017376 (Lactobacillus plantarum strain TMW 1.708 plasmid pL1708-2, complete sequence) position: , mismatch: 9, identity: 0.719

ataatgaattaataaaaaaataatcattatta	CRISPR spacer
aacccaatttaataaaaaaacaatgattattg	Protospacer
*   ..* ************.*** ******.

50. spacer 1.1|124498|32|NZ_ALQT01000013|CRT matches to NZ_CP021472 (Pediococcus pentosaceus strain SRCM100892 plasmid pPC892-2, complete sequence) position: , mismatch: 9, identity: 0.719

ataatgaattaataaaaaaataatcattatta	CRISPR spacer
aacccaatttaataaaaaaacaatgattattg	Protospacer
*   ..* ************.*** ******.

51. spacer 1.1|124498|32|NZ_ALQT01000013|CRT matches to NZ_CP052067 (Lactobacillus paracasei strain 347-16 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

ataatgaattaataaaaaaataatcattatta	CRISPR spacer
aacccaatttaataaaaaaacaatgattattg	Protospacer
*   ..* ************.*** ******.

52. spacer 1.1|124498|32|NZ_ALQT01000013|CRT matches to NZ_CP031209 (Lactobacillus brevis strain UCCLB521 plasmid pUCCLB521_A, complete sequence) position: , mismatch: 9, identity: 0.719

ataatgaattaataaaaaaataatcattatta	CRISPR spacer
aacccaatttaataaaaaaacaatgattattg	Protospacer
*   ..* ************.*** ******.

53. spacer 1.1|124498|32|NZ_ALQT01000013|CRT matches to NZ_CP035015 (Lactobacillus plantarum strain 12_3 plasmid pldC, complete sequence) position: , mismatch: 9, identity: 0.719

ataatgaattaataaaaaaataatcattatta	CRISPR spacer
aacccaatttaataaaaaaacaatgattattg	Protospacer
*   ..* ************.*** ******.

54. spacer 1.1|124498|32|NZ_ALQT01000013|CRT matches to NC_003383 (Listeria innocua Clip11262 plasmid pLI100, complete sequence) position: , mismatch: 9, identity: 0.719

ataatgaat-taataaaaaaataatcattatta	CRISPR spacer
-tggcaggtgtaacaaaaaaattatcattatta	Protospacer
 *......* ***.******** **********

55. spacer 1.1|124498|32|NZ_ALQT01000013|CRT matches to NZ_CP048005 (Lactobacillus paracasei strain CACC 566 plasmid p2CACC566, complete sequence) position: , mismatch: 9, identity: 0.719

ataatgaattaataaaaaaataatcattatta	CRISPR spacer
aacccaatttaataaaaaaacaatgattattg	Protospacer
*   ..* ************.*** ******.

56. spacer 1.1|124498|32|NZ_ALQT01000013|CRT matches to NZ_CP046038 (Lactobacillus sakei strain CBA3614 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

ataatgaattaataaaaaaataatcattatta	CRISPR spacer
aacccaatttaataaaaaaacaatgattattg	Protospacer
*   ..* ************.*** ******.

57. spacer 1.1|124498|32|NZ_ALQT01000013|CRT matches to NZ_CP017410 (Lactobacillus plantarum strain RI-113 plasmid pRI113_4, complete sequence) position: , mismatch: 9, identity: 0.719

ataatgaattaataaaaaaataatcattatta	CRISPR spacer
aacccaatttaataaaaaaacaatgattattg	Protospacer
*   ..* ************.*** ******.

58. spacer 1.1|124498|32|NZ_ALQT01000013|CRT matches to NC_016608 (Pediococcus claussenii ATCC BAA-344 plasmid pPECL-5, complete sequence) position: , mismatch: 9, identity: 0.719

ataatgaattaataaaaaaataatcattatta	CRISPR spacer
aacccaatttaataaaaaaacaatgattattg	Protospacer
*   ..* ************.*** ******.

59. spacer 1.1|124498|32|NZ_ALQT01000013|CRT matches to NZ_CP029967 (Lactobacillus curvatus strain ZJUNIT8 plasmid pnunamed1, complete sequence) position: , mismatch: 9, identity: 0.719

ataatgaattaataaaaaaataatcattatta	CRISPR spacer
aacccaatttaataaaaaaacaatgattattg	Protospacer
*   ..* ************.*** ******.

60. spacer 1.1|124498|32|NZ_ALQT01000013|CRT matches to NZ_CP028336 (Lactobacillus plantarum strain SRCM101167 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

ataatgaattaataaaaaaataatcattatta	CRISPR spacer
aacccaatttaataaaaaaacaatgattattg	Protospacer
*   ..* ************.*** ******.

61. spacer 1.1|124498|32|NZ_ALQT01000013|CRT matches to NZ_CP028231 (Lactobacillus plantarum strain SRCM101222 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

ataatgaattaataaaaaaataatcattatta	CRISPR spacer
aacccaatttaataaaaaaacaatgattattg	Protospacer
*   ..* ************.*** ******.

62. spacer 1.1|124498|32|NZ_ALQT01000013|CRT matches to NZ_CP018183 (Lactobacillus nagelii strain TMW 1.1827 plasmid pL11827-3, complete sequence) position: , mismatch: 9, identity: 0.719

ataatgaattaataaaaaaataatcattatta	CRISPR spacer
aacccaatttaataaaaaaacaatgattattg	Protospacer
*   ..* ************.*** ******.

63. spacer 1.1|124498|32|NZ_ALQT01000013|CRT matches to MH937473 (Streptococcus phage CHPC929, complete genome) position: , mismatch: 9, identity: 0.719

ataatgaattaataaaaaaataatcattatta	CRISPR spacer
atattgaattaataaaaaagtaagtaagtaaa	Protospacer
*** ***************.*** .*     *

64. spacer 1.1|124498|32|NZ_ALQT01000013|CRT matches to NC_010353 (Streptococcus phage 858, complete genome) position: , mismatch: 9, identity: 0.719

ataatgaattaataaaaaaataatcattatta	CRISPR spacer
atattgaattaataaaaaagtaagtaagtaaa	Protospacer
*** ***************.*** .*     *

65. spacer 1.7|124894|34|NZ_ALQT01000013|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP013615 (Clostridium perfringens strain JP838 plasmid pJFP838A, complete sequence) position: , mismatch: 9, identity: 0.735

ataattatggtagtcttatttttaa------tataaaata	CRISPR spacer
ttaattattgtagtattatttttaaagtgtttat------	Protospacer
 ******* ***** **********      ***

66. spacer 1.1|124498|32|NZ_ALQT01000013|CRT matches to NZ_CP015507 (Bacillus oceanisediminis 2691 plasmid pBO1, complete sequence) position: , mismatch: 10, identity: 0.688

ataatgaattaataaaaaaataatcattatta	CRISPR spacer
gaaatgaataaatgaaaaaataatctaccctt	Protospacer
. ******* ***.***********  . .*

67. spacer 1.2|124562|34|NZ_ALQT01000013|CRT,PILER-CR,CRISPRCasFinder matches to CP029330 (Clostridium beijerinckii isolate WB53 plasmid unnamed1) position: , mismatch: 10, identity: 0.706

gcgttgatatgaaaggaaattatagagatatgat	CRISPR spacer
caaactatatgaaagaaaattataaagatataag	Protospacer
  . . *********.********.******.*

68. spacer 1.2|124562|34|NZ_ALQT01000013|CRT,PILER-CR,CRISPRCasFinder matches to CP029330 (Clostridium beijerinckii isolate WB53 plasmid unnamed1) position: , mismatch: 10, identity: 0.706

gcgttgatatgaaaggaaattatagagatatgat	CRISPR spacer
caaactatatgaaagaaaattataaagatataag	Protospacer
  . . *********.********.******.*

69. spacer 1.1|124498|32|NZ_ALQT01000013|CRT matches to NZ_CP031220 (Arcobacter mytili LMG 24559 plasmid pAMYT, complete sequence) position: , mismatch: 11, identity: 0.656

ataatgaattaataaaaaaataatcattatta	CRISPR spacer
tagatgaattaataaataaatattcaaatggg	Protospacer
  .************* ***** ***     .

70. spacer 1.7|124894|34|NZ_ALQT01000013|CRT,PILER-CR,CRISPRCasFinder matches to NC_013792 (Bacillus pseudofirmus OF4 plasmid pBpOF4-01, complete sequence) position: , mismatch: 11, identity: 0.676

ataattatggtagtcttatttttaatataaaata	CRISPR spacer
ttttcaccactaattttatttttaatataaaata	Protospacer
 *  .  .. **.*.*******************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

23803 : 31357

Streptococcus_phage(50.0%)

integrase,transposase

attL 17617:17631|attR 39056:39070

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
17617:17631	attL	NA	NA	NA	NA
WP_000353149.1\|23803_24460_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.2e-22	31.8
WP_000594364.1\|24469_25747_-	ABC transporter permease	NA	NA	NA	NA
WP_000508795.1\|26488_26650_+	TM2 domain-containing protein	NA	NA	NA	NA
WP_001867107.1\|26822_27032_-\|transposase	transposase	NA	NA	NA	NA
WP_001865698.1\|27157_27418_-\|transposase	IS3 family transposase	A0A0C5AEA5	Paenibacillus_phage	3.4e-11	43.0
WP_001122304.1\|27439_27640_-\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_000640620.1\|27801_28206_-	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	1.3e-20	43.6
WP_001872365.1\|28205_28472_+	hypothetical protein	Q77YW7	Streptococcus_phage	9.2e-20	65.2
WP_071659971.1\|28474_29089_+\|integrase	site-specific integrase	F8HGP4	Streptococcus_phage	9.2e-55	60.7
WP_001068667.1\|29233_29581_-	50S ribosomal protein L19	NA	NA	NA	NA
WP_000595708.1\|30160_31357_-	voltage-gated chloride channel family protein	A0A1X9I5Z9	Streptococcus_phage	4.6e-103	54.5
39056:39070	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_ALQT01000003

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

37289 : 45779

Streptococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000767484.1\|37289_38117_+	exodeoxyribonuclease III	M1PSC0	Streptococcus_phage	4.3e-124	78.0
WP_000287944.1\|38156_38513_-	arsenate reductase family protein	M1PLC0	Streptococcus_phage	1.5e-41	71.8
WP_000966770.1\|38514_38991_-	methylated-DNA--[protein]-cysteine S-methyltransferase	M1PFU9	Streptococcus_phage	1.8e-37	50.3
WP_000232156.1\|39045_40227_-	phosphoglycerate dehydrogenase	M1NSB9	Streptococcus_phage	7.0e-168	75.6
WP_001167085.1\|40289_40838_-	acetyltransferase	M1PSC3	Streptococcus_phage	1.1e-54	58.4
WP_000603277.1\|42130_42766_+	copper homeostasis protein CutC	NA	NA	NA	NA
WP_011058365.1\|42809_42914_-	hypothetical protein	NA	NA	NA	NA
WP_011058366.1\|42898_43060_+	hypothetical protein	NA	NA	NA	NA
WP_001866320.1\|43035_43899_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	M1PLC5	Streptococcus_phage	3.7e-110	70.4
WP_000358198.1\|43904_44231_-	DNA replication initiation control protein YabA	M1PFV3	Streptococcus_phage	3.2e-30	61.1
WP_000364565.1\|44260_45124_-	DNA polymerase III subunit delta'	M1NSC1	Streptococcus_phage	7.3e-74	49.7
WP_000715592.1\|45143_45779_-	dTMP kinase	M1PSC7	Streptococcus_phage	2.8e-67	61.1

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

4. NZ_ALQT01000014

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

101568 : 110556

Bacillus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000998734.1\|101568_102165_+	threonylcarbamoyl-AMP synthase	A0A291ATS8	Pandoravirus	3.7e-16	29.4
WP_000575542.1\|102256_103513_+	serine hydroxymethyltransferase	A0A240F3L3	Aeromonas_phage	6.0e-93	51.3
WP_000968655.1\|103517_104495_+	nucleoid-associated protein	NA	NA	NA	NA
WP_000472259.1\|104496_105099_+	lysozyme family protein	A0A223LKM8	Bacillus_phage	1.1e-20	40.1
WP_000826945.1\|105110_106829_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	2.8e-40	26.7
WP_000647647.1\|106829_108563_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	1.0e-50	31.2
WP_000746856.1\|108576_108774_+	hypothetical protein	NA	NA	NA	NA
WP_000222544.1\|108837_110556_-	phospho-sugar mutase	A0A1X9I671	Streptococcus_phage	1.4e-278	84.8

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

5. NZ_ALQT01000005

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

40066 : 47270

Streptococcus_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000706190.1\|40066_41311_+	insulinase family protein	A0A1X9I714	Streptococcus_phage	1.7e-87	41.5
WP_000217765.1\|41312_42596_+	insulinase family protein	A0A2K9V7S4	Bandra_megavirus	1.6e-21	33.3
WP_000239224.1\|42718_43261_+	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA
WP_000181757.1\|43260_44100_+	energy-coupling factor transporter ATPase	G9BWD6	Planktothrix_phage	3.5e-20	30.0
WP_000510606.1\|44075_44918_+	energy-coupling factor transporter ATPase	W6JKT0	Anomala_cuprea_entomopoxvirus	2.5e-18	25.5
WP_000359358.1\|44910_45705_+	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA
WP_000029067.1\|45920_46460_+	LysM peptidoglycan-binding domain-containing protein	A0A249XZV3	Enterococcus_phage	3.0e-17	46.4
WP_001042661.1\|46565_47270_+	transglycosylase SLT domain-containing protein	A0A2H4J6C5	uncultured_Caudovirales_phage	3.2e-27	56.6

DBSCAN-SWA_2

55590 : 72562

Streptococcus_phage(50.0%)

integrase

attL 58169:58188|attR 72764:72783

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000852645.1\|55590_56946_+	replicative DNA helicase	A0A1P8VVQ6	Streptococcus_phage	1.2e-152	62.6
WP_001278152.1\|56957_57245_+	hypothetical protein	NA	NA	NA	NA
WP_000092759.1\|57574_58186_+	30S ribosomal protein S4	NA	NA	NA	NA
58169:58188	attL	NA	NA	NA	NA
WP_000605382.1\|58292_59465_-\|integrase	site-specific integrase	A0A1X9I5Y5	Streptococcus_phage	4.3e-154	70.4
WP_000429449.1\|59797_60763_-	DUF3644 domain-containing protein	A0A0N9RUA4	Staphylococcus_phage	7.1e-86	51.1
WP_000350953.1\|60789_61131_-	hypothetical protein	A0A1S5SDB5	Streptococcus_phage	2.2e-13	59.7
WP_001137532.1\|61823_62033_-	TM2 domain-containing protein	M4ZS56	Bacillus_phage	4.9e-08	55.8
WP_001107581.1\|62122_62665_-	helix-turn-helix transcriptional regulator	Q708R9	Streptococcus_phage	1.7e-15	51.2
WP_000195665.1\|62816_63044_+	helix-turn-helix transcriptional regulator	Q38329	Lactococcus_phage	7.4e-10	53.2
WP_001258614.1\|63057_63678_+	phage repressor protein	A0A1W6JPC3	Staphylococcus_phage	4.9e-40	42.9
WP_001261784.1\|63677_63947_+	hypothetical protein	NA	NA	NA	NA
WP_000877494.1\|64189_64522_+	hypothetical protein	NA	NA	NA	NA
WP_025194541.1\|64644_64836_+	hypothetical protein	NA	NA	NA	NA
WP_000206022.1\|64847_65210_+	hypothetical protein	NA	NA	NA	NA
WP_000174501.1\|65206_65536_+	hypothetical protein	NA	NA	NA	NA
WP_001048305.1\|65538_65811_+	hypothetical protein	A0A1X9I5U9	Streptococcus_phage	6.1e-19	60.0
WP_001029289.1\|65811_66660_+	hypothetical protein	A0A1X9I6L2	Streptococcus_phage	5.4e-122	74.3
WP_000838186.1\|66679_68182_+	DNA primase	Q9AZI5	Lactococcus_phage	1.3e-62	36.9
WP_000173131.1\|68713_69244_+	hypothetical protein	A0A1X9I5U4	Streptococcus_phage	9.4e-48	55.3
WP_000866983.1\|69337_69826_+	hypothetical protein	A0A1X9I5V2	Streptococcus_phage	4.4e-44	53.5
WP_000500996.1\|70225_70588_+	DUF1492 domain-containing protein	NA	NA	NA	NA
WP_000038828.1\|70562_70949_+	ArpU family transcriptional regulator	Q938L8	Temperate_phage	6.0e-12	38.9
WP_000381996.1\|71442_71949_+	DUF4065 domain-containing protein	D7RWK7	Brochothrix_phage	3.0e-35	48.8
WP_000935139.1\|71938_72562_+	hypothetical protein	D7RWK8	Brochothrix_phage	1.0e-16	30.6
72764:72783	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

6. NZ_ALQT01000015

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CRISPR-Cas detection and classification

Crispr_ID: NZ_ALQT01000015_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_ALQT01000015_1

44434-45855

TypeII

II-A

Consensus_repeat	Method
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	CRT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	CRISPRCasFinder
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	PILER-CR
AGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	PILER-CR

21 spacers

csn2,cas2,cas1,cas9

The CRISPR arrays of NZ_ALQT01000015_1

>merge|NZ_ALQT01000015|1|44434-45855|CRT,CRISPRCasFinder,PILER-CR,PILER-CR
TGATGTCCTAGCATAATAACAGCACAGCTCTAAAACACATATCCTTTTGTTAGGTCAAAAGAAGATGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACGATGGAGTGTTAGAAGAATTAAAAAGAAGAGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACTCAACATGCTTACTTAGAGCATCTCGCTGAGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACTCACTTGTGAAATATCTTCAGAAGATAGAAGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACTATTTCTATATTTATTATATAATATATTATGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACGTAGTGAAAACACATATTGTAAAAGTATTAGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACTAGTATCTCAAATAAAATTCAACTTCACTTGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACACGTCTAAAATATTATCAAACATAGGGTTGGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACATTTTTAGCATAGATTGCTGATTTGGACCCGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACTCACAGGTTTACTTGGTGGCGTGGAATTCAGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACTCAATTTAATTAAACAACCACTCAATATGAGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACATCTTGCTTTATTGACTGATAGAGCAATTTGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACTCCTCTATCGGTTTTAACGGCAATCAATTGGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACTATTCATGGAATTATCGTTATGTTTCTACTGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACAAGCTAAAAACACAATGCGTTTGTTTAGTTGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACACGACTTCGTTTTCTTCGATTTCTGACCATGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACAAGAAGCGGAGAGACGGTTAAAAGTGCCGTGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACCATACTGGGCTTTCTTGACCGCTTCCAGATGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACAAATACACTCTATAAGTTGAAAACTCAAAAGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACGCTGCGTTAACCCCTCTGCCATCTTTCCAAGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACAGTGTTATTGTATTACTTATCATTTTACGAGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC

>NZ_ALQT01000015|1|1|44434-45855|CRT
TGATGTCCTAGCATAATAACAGCACAGCTCTAAAAC	ACATATCCTTTTGTTAGGTCAAAAGAAGAT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	GATGGAGTGTTAGAAGAATTAAAAAGAAGA
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TCAACATGCTTACTTAGAGCATCTCGCTGA
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TCACTTGTGAAATATCTTCAGAAGATAGAA
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TATTTCTATATTTATTATATAATATATTAT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	GTAGTGAAAACACATATTGTAAAAGTATTA
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TAGTATCTCAAATAAAATTCAACTTCACTT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	ACGTCTAAAATATTATCAAACATAGGGTTG
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	ATTTTTAGCATAGATTGCTGATTTGGACCC
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TCACAGGTTTACTTGGTGGCGTGGAATTCA
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TCAATTTAATTAAACAACCACTCAATATGA
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	ATCTTGCTTTATTGACTGATAGAGCAATTT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TCCTCTATCGGTTTTAACGGCAATCAATTG
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TATTCATGGAATTATCGTTATGTTTCTACT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	AAGCTAAAAACACAATGCGTTTGTTTAGTT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	ACGACTTCGTTTTCTTCGATTTCTGACCAT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	AAGAAGCGGAGAGACGGTTAAAAGTGCCGT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	CATACTGGGCTTTCTTGACCGCTTCCAGAT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	AAATACACTCTATAAGTTGAAAACTCAAAA
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	GCTGCGTTAACCCCTCTGCCATCTTTCCAA
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	AGTGTTATTGTATTACTTATCATTTTACGA
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC

>NZ_ALQT01000015|1|1|44500-45855|CRISPRCasFinder
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	GATGGAGTGTTAGAAGAATTAAAAAGAAGA
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TCAACATGCTTACTTAGAGCATCTCGCTGA
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TCACTTGTGAAATATCTTCAGAAGATAGAA
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TATTTCTATATTTATTATATAATATATTAT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	GTAGTGAAAACACATATTGTAAAAGTATTA
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TAGTATCTCAAATAAAATTCAACTTCACTT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	ACGTCTAAAATATTATCAAACATAGGGTTG
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	ATTTTTAGCATAGATTGCTGATTTGGACCC
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TCACAGGTTTACTTGGTGGCGTGGAATTCA
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TCAATTTAATTAAACAACCACTCAATATGA
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	ATCTTGCTTTATTGACTGATAGAGCAATTT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TCCTCTATCGGTTTTAACGGCAATCAATTG
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TATTCATGGAATTATCGTTATGTTTCTACT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	AAGCTAAAAACACAATGCGTTTGTTTAGTT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	ACGACTTCGTTTTCTTCGATTTCTGACCAT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	AAGAAGCGGAGAGACGGTTAAAAGTGCCGT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	CATACTGGGCTTTCTTGACCGCTTCCAGAT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	AAATACACTCTATAAGTTGAAAACTCAAAA
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	GCTGCGTTAACCCCTCTGCCATCTTTCCAA
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	AGTGTTATTGTATTACTTATCATTTTACGA
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC

>NZ_ALQT01000015|1|1|44698-45855|PILER-CR
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TATTTCTATATTTATTATATAATATATTAT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	GTAGTGAAAACACATATTGTAAAAGTATTA
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TAGTATCTCAAATAAAATTCAACTTCACTT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	ACGTCTAAAATATTATCAAACATAGGGTTG
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	ATTTTTAGCATAGATTGCTGATTTGGACCC
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TCACAGGTTTACTTGGTGGCGTGGAATTCA
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TCAATTTAATTAAACAACCACTCAATATGA
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	ATCTTGCTTTATTGACTGATAGAGCAATTT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TCCTCTATCGGTTTTAACGGCAATCAATTG
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TATTCATGGAATTATCGTTATGTTTCTACT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	AAGCTAAAAACACAATGCGTTTGTTTAGTT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	ACGACTTCGTTTTCTTCGATTTCTGACCAT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	AAGAAGCGGAGAGACGGTTAAAAGTGCCGT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	CATACTGGGCTTTCTTGACCGCTTCCAGATGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACAAATACACTCTATAAGTTGAAAACTCAAAAGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACGCTGCGTTAACCCCTCTGCCATCTTTCCAAGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACAGTGTTATTGTATTACTTATCATTTTACGA
	AATACACTCTATAAGTTGAAAACTCAAAA
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACG	CTGCGTTAACCCCTCTGCCATCTTTCCAA
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACA	GTGTTATTGTATTACTTATCATTTTACGA
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC

>NZ_ALQT01000015|1|2|45622-45855|PILER-CR
	TATTTCTATATTTATTATATAATATATTAT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	GTAGTGAAAACACATATTGTAAAAGTATTA
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TAGTATCTCAAATAAAATTCAACTTCACTT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	ACGTCTAAAATATTATCAAACATAGGGTTG
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	ATTTTTAGCATAGATTGCTGATTTGGACCC
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TCACAGGTTTACTTGGTGGCGTGGAATTCA
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TCAATTTAATTAAACAACCACTCAATATGA
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	ATCTTGCTTTATTGACTGATAGAGCAATTT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TCCTCTATCGGTTTTAACGGCAATCAATTG
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TATTCATGGAATTATCGTTATGTTTCTACT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	AAGCTAAAAACACAATGCGTTTGTTTAGTT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	ACGACTTCGTTTTCTTCGATTTCTGACCAT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	AAGAAGCGGAGAGACGGTTAAAAGTGCCGT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	CATACTGGGCTTTCTTGACCGCTTCCAGATGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACAAATACACTCTATAAGTTGAAAACTCAAAAGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACGCTGCGTTAACCCCTCTGCCATCTTTCCAAGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACAGTGTTATTGTATTACTTATCATTTTACGA
	AATACACTCTATAAGTTGAAAACTCAAAA
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACG	CTGCGTTAACCCCTCTGCCATCTTTCCAA
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACA	GTGTTATTGTATTACTTATCATTTTACGA
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_ALQT01000015.1\|WP_001019133.1\|41491_43324_-\|elongation-factor-4	unknown	unknown	gnl\|CDD\|235462
NZ_ALQT01000015.1\|WP_000122194.1\|46606_46948_-\|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226043
NZ_ALQT01000015.1\|WP_000914664.1\|54473_55604_-\|oxygen-independent-coproporphyrinogen-III-oxidase	unknown	unknown	gnl\|CDD\|236309
NZ_ALQT01000015.1\|WP_000168898.1\|34002_36795_-\|cation-transporting-P-type-ATPase	unknown	unknown	gnl\|CDD\|223550
NZ_ALQT01000015.1\|WP_000180007.1\|37853_38513_-\|HD-domain-containing-protein	unknown	unknown	gnl\|CDD\|224336
NZ_ALQT01000015.1\|WP_000590706.1\|45954_46620_-\|type-II-A-CRISPR-associated-protein-Csn2	csn2	pfam09711_csn2_CAS-II-A	gnl\|CDD\|213408
NZ_ALQT01000015.1\|WP_000621142.1\|37380_37845_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_ALQT01000015.1\|WP_000146566.1\|32140_32779_+\|CatB-related-O-acetyltransferase	unknown	unknown	gnl\|CDD\|100040
NZ_ALQT01000015.1\|WP_000159234.1\|56100_56472_-\|YbgA-family-protein	unknown	unknown	gnl\|CDD\|377982
NZ_ALQT01000015.1\|WP_000323544.1\|52961_53732_-\|TIGR01457-family-HAD-type-hydrolase	unknown	unknown	gnl\|CDD\|319832
NZ_ALQT01000015.1\|WP_000523795.1\|53732_54470_-\|acyl-ACP-thioesterase	unknown	unknown	gnl\|CDD\|366738
NZ_ALQT01000015.1\|WP_000438314.1\|43459_43876_-\|nucleoside-diphosphate-kinase	unknown	unknown	gnl\|CDD\|179085
NZ_ALQT01000015.1\|WP_001040087.1\|47815_51928_-\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	COG3513_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|273840
NZ_ALQT01000015.1\|WP_000653357.1\|52315_52972_-\|TIGR01906-family-membrane-protein	unknown	unknown	gnl\|CDD\|226884
NZ_ALQT01000015.1\|WP_000929489.1\|46944_47814_-\|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|274694
NZ_ALQT01000015.1\|WP_000665410.1\|36946_37381_-\|peptide-methionine-(R)-S-oxide-reductase-MsrB	unknown	unknown	gnl\|CDD\|234692
NZ_ALQT01000015.1\|WP_011058334.1\|44008_44179_-\|hypothetical-protein	unknown	unknown	unknown
NZ_ALQT01000015.1\|WP_001241816.1\|55695_56076_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|131381
NZ_ALQT01000015.1\|WP_029662154.1\|38612_41231_-\|pneumococcal-type-histidine-triad-protein	unknown	unknown	gnl\|CDD\|380193
NZ_ALQT01000015.1\|WP_000065321.1\|32899_34003_-\|DUF2974-domain-containing-protein	unknown	unknown	gnl\|CDD\|371412

Protein	Function_ID	Function_description	E-value
NZ_ALQT01000015.1\|WP_001019133.1\|41491_43324_-\|elongation-factor-4	gnl\|CDD\|235462	PRK05433, PRK05433, GTP-binding protein LepA; Provisional.	0
NZ_ALQT01000015.1\|WP_000122194.1\|46606_46948_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	2.38084e-52
NZ_ALQT01000015.1\|WP_000914664.1\|54473_55604_-\|oxygen-independent-coproporphyrinogen-III-oxidase	gnl\|CDD\|236309	PRK08599, PRK08599, oxygen-independent coproporphyrinogen III oxidase.	0
NZ_ALQT01000015.1\|WP_000168898.1\|34002_36795_-\|cation-transporting-P-type-ATPase	gnl\|CDD\|223550	COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism].	0
NZ_ALQT01000015.1\|WP_000590706.1\|45954_46620_-\|type-II-A-CRISPR-associated-protein-Csn2	gnl\|CDD\|213408	cd09758, Csn2, CRISPR/Cas system-associated protein Csn2. Csn2 is a Nmeni subtype-specific Cas protein, which may function in the adaptation process which mediates the incorporation of foreign nucleic acids into the microbial host genome. Csn 2 may interact directly with double-stranded DNA. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA. Csn2 has been predicted to be a functional analog of Cas4 based on anti-correlated phyletic patterns; also known as SPy1049 family.	3.61399e-122
NZ_ALQT01000015.1\|WP_000621142.1\|37380_37845_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	5.91796e-19
NZ_ALQT01000015.1\|WP_000146566.1\|32140_32779_+\|CatB-related-O-acetyltransferase	gnl\|CDD\|100040	cd03349, LbH_XAT, Xenobiotic acyltransferase (XAT): The XAT class of hexapeptide acyltransferases is composed of a large number of microbial enzymes that catalyze the CoA-dependent acetylation of a variety of hydroxyl-bearing acceptors such as chloramphenicol and streptogramin, among others. Members of this class of enzymes include Enterococcus faecium streptogramin A acetyltransferase and Pseudomonas aeruginosa chloramphenicol acetyltransferase. They contain repeated copies of a six-residue hexapeptide repeat sequence motif (X-[STAV]-X-[LIV]-[GAED]-X) and adopt a left-handed parallel beta helix (LbH) structure. The active enzyme is a trimer with CoA and substrate binding sites at the interface of two separate LbH subunits. XATs are implicated in inactivating xenobiotics leading to xenobiotic resistance in patients.	9.50556e-71
NZ_ALQT01000015.1\|WP_000159234.1\|56100_56472_-\|YbgA-family-protein	gnl\|CDD\|377982	pfam08349, DUF1722, Protein of unknown function (DUF1722). This domain of unknown function is found in bacteria and archaea and is homologous to the hypothetical protein ybgA from E. coli.	6.08694e-28
NZ_ALQT01000015.1\|WP_000323544.1\|52961_53732_-\|TIGR01457-family-HAD-type-hydrolase	gnl\|CDD\|319832	cd07530, HAD_Pase_UmpH-like, UmpH/NagD family phosphatase, similar to Escherichia coli UmpH UMP phosphatase/NagD nucleotide phosphatase and Mycobacterium tuberculosis Rv1692 glycerol 3-phosphate phosphatase. Escherichia coli UmpH/NagD is a ribonucleoside tri-, di-, and monophosphatase with a preference for purines, it shows peak activity with UMP and functions in UMP-degradation. It is also an effective phosphatase with AMP, GMP and CMP. Mycobacterium tuberculosis phosphatase, Rv1692 is a glycerol 3-phosphate phosphatase. Rv1692 is the final enzyme involved in glycerophospholipid recycling/catabolism. This subfamily belongs to the UmpH/NagD phosphatase family, and to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	1.19143e-132
NZ_ALQT01000015.1\|WP_000523795.1\|53732_54470_-\|acyl-ACP-thioesterase	gnl\|CDD\|366738	pfam01643, Acyl-ACP_TE, Acyl-ACP thioesterase. This family consists of various acyl-acyl carrier protein (ACP) thioesterases (TE) these terminate fatty acyl group extension via hydrolysing an acyl group on a fatty acid.	3.68196e-111
NZ_ALQT01000015.1\|WP_000438314.1\|43459_43876_-\|nucleoside-diphosphate-kinase	gnl\|CDD\|179085	PRK00668, ndk, mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-; Validated.	4.64422e-78
NZ_ALQT01000015.1\|WP_001040087.1\|47815_51928_-\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	gnl\|CDD\|273840	TIGR01865, conserved_hypothetical_protein, CRISPR subtype II/NMENI RNA-guided endonuclease Cas9/Csn1. CRISPR loci appear to be mobile elements with a wide host range. This model represents a protein found only in CRISPR-containing species, near other CRISPR-associated proteins (cas), as part of the NMENI subtype of CRISPR/Cas locus. The species range so far for this protein is animal pathogens and commensals only.	0
NZ_ALQT01000015.1\|WP_000653357.1\|52315_52972_-\|TIGR01906-family-membrane-protein	gnl\|CDD\|226884	COG4478, COG4478, Predicted membrane protein [Function unknown].	9.75792e-52
NZ_ALQT01000015.1\|WP_000929489.1\|46944_47814_-\|type-II-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274694	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is a prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 variant of the NMENI subtype of CRISPR/Cas system.	2.54315e-139
NZ_ALQT01000015.1\|WP_000665410.1\|36946_37381_-\|peptide-methionine-(R)-S-oxide-reductase-MsrB	gnl\|CDD\|234692	PRK00222, PRK00222, peptide-methionine (R)-S-oxide reductase MsrB.	6.40832e-86
NZ_ALQT01000015.1\|WP_000180007.1\|37853_38513_-\|HD-domain-containing-protein	gnl\|CDD\|224336	COG1418, COG1418, Predicted HD superfamily hydrolase [General function prediction only].	2.66997e-33
NZ_ALQT01000015.1\|WP_001241816.1\|55695_56076_-\|hypothetical-protein	gnl\|CDD\|131381	TIGR02328, TIGR02328, conserved hypothetical protein. Members of this protein are found in a small number of taxonomically well separated species, yet are strongly conserved, suggesting lateral gene transfer. Members are found in Treponema denticola, Clostridium acetobutylicum, and several of the Firmicutes. The function of this protein is unknown. [Hypothetical proteins, Conserved].	6.45558e-80
NZ_ALQT01000015.1\|WP_029662154.1\|38612_41231_-\|pneumococcal-type-histidine-triad-protein	gnl\|CDD\|380193	NF033189, internalin_A, class 1 internalin InlA. Internalins, as found in the intracellular human pathogen Listeria monocytogenes, are paralogous surface or secreted proteins with an N-terminal signal peptide, leucine-rich repeats, and usually a C-terminal LPXTG processing and cell surface anchoring site. See PMID:17764999 for a general discussion of internalins. Members of this family are internalin A (InlA), a class 1 (LPXTG-type) internalin.	1.10721e-21
NZ_ALQT01000015.1\|WP_000065321.1\|32899_34003_-\|DUF2974-domain-containing-protein	gnl\|CDD\|371412	pfam11187, DUF2974, Protein of unknown function (DUF2974). This bacterial family of proteins has no known function.	1.82724e-105

>NZ_ALQT01000015.1|WP_011058334.1|44008_44179_-|hypothetical-protein
MKGYNSNLMVKGLGCSTLYLIISLTALVLLVIAGVFFVINTCKLTRKAVENLSIIN
>NZ_ALQT01000015.1|WP_000438314.1|43459_43876_-|nucleoside-diphosphate-kinase
MEQTFFMIKPDGVKRGFIGEVISRIERRGFSIDRLEVRYADADILKRHYAELTDRPFFPTLVDYMTSGPVIIGVISGEEVISTWRTMMGSTNPKDALPGTIRGDFAQAPSPNQATCNIVHGSDSPESATREIAIWFNN
>NZ_ALQT01000015.1|WP_001019133.1|41491_43324_-|elongation-factor-4
MNIEDLKKRQEKIRNFSIIAHIDHGKSTLADRILEKTETVSSREMQAQLLDSMDLERERGITIKLNAIELNYTAKDGETYIFHLIDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQTLANVYLALDNDLEILPVINKIDLPAADPERVRAEVEDVIGLDASEAVLASAKAGIGIEEILEQIVEKVPAPTGEVDAPLQALIFDSVYDAYRGVILQVRIVNGMVKPGDKIQMMSNGKTFDVTEVGIFTPKAVGRDFLATGDVGYIAASIKTVADTRVGDTITLANNPAIEPLHGYKQMNPMVFAGLYPIESNKYNDLREALEKLQLNDASLQFEPETSQALGFGFRCGFLGLLHMDVIQERLEREFNIDLIMTAPSVVYHVNTTDGEMLEVSNPSEFPDPTRVDSIEEPYVKAQIMVPQEFVGAVMELAQRKRGDFVTMDYIDDNRVNVIYQIPLAEIVFDFFDKLKSSTRGYASFDYEISEYRRSQLVKMDILLNGDKVDALSFIVHKEFAYERGKLIVDKLKKIIPRQQFEVPIQAAIGQKIVARSDIKALRKNVLAKCYGGDVSRKRKLLEKQKAGKKRMKAIGSVEVPQEAFLSVLSMDDDDKK
>NZ_ALQT01000015.1|WP_029662154.1|38612_41231_-|pneumococcal-type-histidine-triad-protein
MIALAGLVLSCHFALTACHTQEHKNSHHIKTKQVAKKKANKKKVSVKESHKKRKGVAGVDFPTDDGFLLTKDSKILSHTDSGIVVAHGNHSHFIFYSDLKGSKFSYLIPNANTKTNKNQAVRNFKAGAVAVNTLNDGYVFNPADIVSEDANGYVVRHGDHFHYIPKASLSQQKQVQASRAVSRLGNQSNSHYRVNSSKIAGLHYPTSNGFLFNGRGIKGTTPTGILVEHHNHLHFISFADLRKGGWGSIADRYQPQKKADSKKQSPSSKKPRTENTLPKDIKDKLAYLARELHLDISRIRVLKTLNGEIGFEYPHDDHTHVIMAKDIDLSKPIPNPHHDDEDHHKGHHHDESDHKHEEHEHTKSNKLSDEDQKKLIYLAEKLGLNPNQIEVLTSEDGSIIFKYPHDDHSHTIASKDIEIGKPIPDGHHDHSHAKDKVGMATLKQIGFDDEIIQDILHADAPTPFPSNETNPEKMRQWLATVTKINIGQRTNPFQRFGLSLMPNIEVLGIGFTPINDMTPVLQFKKLKQLWMTNTGITDYSFLDKMPLLEGLDISQNGIKDLSFLTKYKQLSLIAAANNGITSLKPLAELPNLQFLVLSHNNISDLTPLSNLTKLQELHLDHNNVKNLSALSGKKDLKVLDLSNNKSADLSTLKTTSLETLLLNETNTSNLSFLKQNPKVSNLTINNAKLASLDGIEESDEIVKVEAEGNQIKSLVLKNKQGSLKFLNVTNNQLTSLEGVNNYTSLETLSVSKNKLESLDIKTPNKTVTNLDFSHNNVPTSQLKLNEKNIPEAVAKNFPAVVEGSMVGNGSLAEKAAMASKEDKQVSDNTNHQKNTEKSAQANADSKKENPKTHDEHHDHEETDHAHVGHHHH
>NZ_ALQT01000015.1|WP_000180007.1|37853_38513_-|HD-domain-containing-protein
MTMVKREDVILNATENMVHHKLKNDPSGHDWFHIVRVRNLAVELAHKEGANTFICQMAALLHDIIDDKICQDSKQASYELTQWLYSQDLAIAEVEHILDILENISFKAGTGLTMKTLEGQIVQDADRLDAMGAIGIARTMAYSGSKGRLIHDPNLKPRENLTLEEYRNGQDTAIMHFYEKLLKLKDLMNTKQGKMLAQKRHDFLELYLAEFYAEWNGKR
>NZ_ALQT01000015.1|WP_000621142.1|37380_37845_-|GNAT-family-N-acetyltransferase
MIRRAKEKDLPDIAELLKQILMLHHEVRPDIFHTRGSKFSKEQLKEMLIDESKPIFVYESDEGKVVAHLFLQLQEKRDLPRKSFKTLYIDDLCIDEEVRGQQIGQKLMDFARQYAKKHGCYNITLNVWNDNQRAVSFYEKLGFKPQQTQMEEIL
>NZ_ALQT01000015.1|WP_000665410.1|36946_37381_-|peptide-methionine-(R)-S-oxide-reductase-MsrB
MKETQEELRQRIGHTAYQVTQNSATEHAFTGKYDDFFEEGIYVDIVSGEVLFSSLDKFQSGCGWPAFSKPIENRMVTNHQDHSHGMHRIEVRSRQADSHLGHVFNDGPVDAGGLRYCINSAALDFIPYDQMAKRGYGDYLSLFD
>NZ_ALQT01000015.1|WP_000168898.1|34002_36795_-|cation-transporting-P-type-ATPase
MASTNNVSDTNTRFAKEELEEVFEELGTTQGGLSDEEVAVRQKKYGLNLLSEVKQESIILLFLKNFTSLMAILLWVGGFVAIVSNSLELGLAIWMVNVINGIFSFIQEYRASQATQALEKMLPSYSRVLRKGSEEKILSEQLVPGDIVLIEEGDRISADGRLIKTTDLQVNQSALTGESNPIYKDSNVENDQSKTLIECDNMVFAGTTVSSGSATMVVTAIGMQTQFGQIADLTQGMKSEKSPLQRELDRLTKQISIISITVGIIFFLAATFFVKEPVSKSFIFALGMIVAFIPEGLLPTVTLSLAMAVQRMAKEHALVKKLSSVETLGATSVICSDKTGTLTQNEMTVNHLWQNGKSYQVTGLGYAPEGQILFEGDNICFGNSDRGDLEKLIRFAHLCSNAQVLPPNDDRSTYTVLGDPTEACLNVLLEKSGINIQENRKFAPRLKELPFDSVRKRMTTIHSLGGDEKDKKISITKGAPKEILDLSDYVLSDGKVIPLNKEERNKIQLANDTFAKDGLRVLAVSYCDIEGFSKEQWTQENLEQHMVFIGLIAMSDPPREGVREAIDKCHAASIRIIMVTGDYGLTALSIAKNIGIIRNDDAKVISGLELSEMTDSQLKKELSGEVVFARVAPEQKYRVVTILQEMGEVVAVTGDGVNDAPALKKSDIGVAMGVTGTDVAKESADMILTDDHFASIVHAVEEGRAVYQNIKKFLTYIFNSNTPEAVPSAFFLFSKGFIPLPLTVMQILAVDLGTDMLPALGLGVEPPETDVMNRPPRRLTDRLLDKGLLIKSFLWYGTIESVLAMGGFFWAHYLRYGNFTFFVANGIPYREATTMTLGAIIFSQIGMVMNSRTSYQSIKALSIFGNKLINFGIIMEILAFLVLVYVPLFHNLFNTASLGLSHWLYLISCPFIMIGLDEVRKLFSSRKNKR
>NZ_ALQT01000015.1|WP_000065321.1|32899_34003_-|DUF2974-domain-containing-protein
MSNIITYLKNNSNLTFDELALNDVDILCLNEFGYISFEKLINTTEMKSVLVCELYHEYLQTMAKSYSFMFTSQRHDLCQLMMTSKRFKNLTLSYYRAEISLEFEKQFAAMVFTIPNINYHQVVFRGTDANLIGWKEDFKLTYMREISAHRSAIKYLNTILPYFDKVVLSGHSKGGNLALYAAMFTKPDLKAKIDLIWLIDSPGLQKTLLPTTEYKTTKQKCIRLLPEESIVGMMLYSDIEPLIISSNARGILQHDVTTWEIQEPAILKTGTGLSLKSICFEKTFQQWMAELKSQERKLFFDLLFDSFLSSGVSSLDDFNLASRAKMMKAFHSFRELDDDKKRLFNKSLKLLVTIFWGAYHDNSRETK
>NZ_ALQT01000015.1|WP_000146566.1|32140_32779_+|CatB-related-O-acetyltransferase
MASILKKHLEKRLELKNDPMRTDMSTGASYPKYGFSVGKYTYGYQQFFYEGVNLKEIGAFCSIAQNVTITGLNHPTDHITTNPFIYYKSRGFINEDRADLIDEKKNGKVIIGNDVWIGTNVTILPSVTIGNGAIIGAGSVITKDIPDYGVVAGTPAKIIKYRFSEEEITLLNASQWWNWSDEAIKEHISEFSDKKEFFNTLKSISENKNHKL
>NZ_ALQT01000015.1|WP_000590706.1|45954_46620_-|type-II-A-CRISPR-associated-protein-Csn2
MIKINFPILDEPLVLSNATILTIEDVSVYSSLVKHFYQYDVDEHLKLFDDKQKSLKATELMLVTDILGYDVNSAPILKLIHGDLENQFNEKPEVKSMVEKLAATITELIAFECLENELDLEYDEITILELIKALGVKIETQSDTIFEKCFEIIQVYHYLTKKNLLVFVNSGAYLTKDEVIKLCEYINLMQKSVLFLEPRRLYDLPQYVIDKDYFLIGENMV
>NZ_ALQT01000015.1|WP_000122194.1|46606_46948_-|CRISPR-associated-endonuclease-Cas2
MSYRYMRMILMFDMPTETAEERKAYRKFRKFLLSEGFIMHQFSVYSKLLLNNTANNAMIGRLKVNNPKKGNITLLTVTEKQFARMVYLHGERNTSVANSDSRLVFLGDSYDQD
>NZ_ALQT01000015.1|WP_000929489.1|46944_47814_-|type-II-CRISPR-associated-endonuclease-Cas1
MAGWRTVVVNTHSKLSYKNNHLIFKDSYQTEMIHLSEIDILIMETTDIVLSTMLIKRLVDENILVIFCDDKRLPTAMLMPYYARHDSSLQLSRQMSWIEDVKADVWTSIIAQKILNQSFYLGECSFFEKSQSIMNLYHDLEPFDPSNREGHAARIYFNTLFGNDFSREQDNPINAGLDYGYSLLLSMFAREVVKCGCMTQFGLKHANQFNQFNLASDIMEPFRPIVDRIIYENRQSDFVKMKRELFSMFSETYSYNGKEMYLSNIVSDYTKKVIKSLNSDGNGIPEFRI
>NZ_ALQT01000015.1|WP_001040087.1|47815_51928_-|type-II-CRISPR-RNA-guided-endonuclease-Cas9
MNKPYSIGLDIGTNSVGWSIITDDYKVPAKKMRVLGNTDKEYIKKNLIGALLFDGGNTAADRRLKRTARRRYTRRRNRILYLQEIFAEEMSKVDDSFFHRLEDSFLVEEDKRGSKYPIFATLQEEKDYHEKFSTIYHLRKELADKKEKADLRLIYIALAHIIKFRGHFLIEDDSFDVRNTDISKQYQDFLEIFNTTFENNDLLSQNVDVEAILTDKISKSAKKDRILAQYPNQKSTGIFAEFLKLIVGNQADFKKYFNLEDKTPLQFAKDSYDEDLENLLGQIGDEFADLFSAAKKLYDSVLLSGILTVIDLSTKAPLSASMIQRYDEHREDLKQLKQFVKASLPEKYQEIFADSSKDGYAGYIEGKTNQEAFYKYLSKLLTKQEDSENFLEKIKNEDFLRKQRTFDNGSIPHQVHLTELKAIIRRQSEYYPFLKENQDRIEKILTFRIPYYIGPLAREKSDFAWMTRKTDDSIRPWNFEDLVDKEKSAEAFIHRMTNNDFYLPEEKVLPKHSLIYEKFTVYNELTKVRYKNEQGETYFFDSNIKQEIFDGVFKEHRKVSKKKLLDFLAKEYEEFRIVDVIGLDKENKAFNASLGTYHDLEKILDKDFLDNPDNESILEDIVQTLTLFEDREMIKKRLENYKDLFTESQLKKLYRRHYTGWGRLSAKLINGIRDKESQKTILDYLIDDGRSNRNFMQLINDDGLSFKSIISKAQAGSHSDNLKEVVGELAGSPAIKKGILQSLKIVDELVKVMGYEPEQIVVEMARENQTTNQGRRNSRQRYKLLDDGVKNLASDLNGNILKEYPTDNQALQNERLFLYYLQNGRDMYTGEALDIDNLSQYDIDHIIPQAFIKDDSIDNRVLVSSAKNRGKSDDVPSLEIVKDCKVFWKKLLDAKLMSQRKYDNLTKAERGGLTSDDKARFIQRQLVETRQITKHVARILDERFNNELDSKGRRIRKVKIVTLKSNLVSNFRKEFGFYKIREVNNYHHAHDAYLNAVVAKAILTKYPQLEPEFVYGDYPKYNSYKTRKSATEKLFFYSNIMNFFKTKVTLADGTVVVKDDIEVNNDTGEIVWDKKKHFATVRKVLSYPQNNIVKKTEIQTGGFSKESILAHGNSDKLIPRKTKDIYLDPKKYGGFDSPIVAYSVLVVADIKKGKAQKLKTVTELLGITIMERSRFEKNPSAFLESKGYLNIRADKLIILPKYSLFELENGRRRLLASAGELQKGNELALPTQFMKFLYLASRYNESKGKPEEIEKKQEFVNQHVSYFDDILQLINDFSKRVILADANLEKINKLYQDNKENISVDELANNIINLFTFTSLGAPAAFKFFDKIVDRKRYTSTKEVLNSTLIHQSITGLYETRIDLGKLGED
>NZ_ALQT01000015.1|WP_000653357.1|52315_52972_-|TIGR01906-family-membrane-protein
MKDKLLVVLTWIWIISLATLATIYIAWLIYPIEIQFLKLEKVVYLKAETIYYNFNKLMIYLTHPFISDLNMPSFPSSEDGLKHFADVKYLFTLAHGLFVILTFPVIYFLRRGWKQKSIFLYEGFFKIAIMLPIFIVVCAFLLGFDQFFTLFHEVLFPGDSTWQFNPLTDPVIWILPETFFLHCFIIFLLIYETITIILLIIGRKHLKLRKYKNKMQAL
>NZ_ALQT01000015.1|WP_000323544.1|52961_53732_-|TIGR01457-family-HAD-type-hydrolase
MAYKGYLIDLDGTIYKGKSRIPAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVETPLETIYTATMATVDYMNDMNRGKTAYVIGEEGLKKAIADAGYVEDTKNPAYVVVGLDWNVTYDKLATATLAIQNGALFIGTNPDLNIPTERGLLPGAGSLNALLEAATRIKPVFIGKPNAIIMNKALEILNIPRNQAVMVGDNYLTDIMAGINNDIDTLLVTTGFTTVEEVPDLPIQPSYVLASLDEWTFNEG
>NZ_ALQT01000015.1|WP_000523795.1|53732_54470_-|acyl-ACP-thioesterase
MGLLYRETYEVPFYESDTNHYMKLPQLLALALQISAKQSLKLGIGDDIVFKRYGLVWVVTDYIIDIERLPKHAEKIVIETEAKAHNKLLCYRYFYIYGEDGQKIITISSAFVLMDFKTRKIHPVLDDITSIYQSQRIKKVIRGPKYHPIGDSKVKQYHVRYFDLDMNGHVNNSKYLEWMYDVLDLDFLSSHIPKKIDLKYIKEIQYGTDIKSHWYQDGLVTRHDIIGGDAIHAQARIEWQEKKED
>NZ_ALQT01000015.1|WP_000914664.1|54473_55604_-|oxygen-independent-coproporphyrinogen-III-oxidase
MLKKPTSAYVHIPFCTQICYYCDFSKVFIKNQPVDAYLQALIREFRSYDITELRTLYIGGGTPTSISAVQLDYLLTELSRDLNLNTLEEFTIEANPGDLTVDKIEVLQKSAVNRVSLGVQTFNDKHLKRIGRSHNEAQIYSTIDALKTAGFQNISIDLIYALPGQTMDDVRSNVAKALSLNIPHLSLYSLILEHHTVFMNKMRRGKLHLPTEDLEAEMFEYIISEMERNGFEHYEISNFTKPGFESRHNLMYWDNVEYYGVGAGASGYLDGIRYRNRGPIQHYLKGVSEGNARLSEEVLSKNEMMEEELFLGLRKKEGVSIGKFEQKFGTSFEKRYGQIVQELQSDGLLKENNGFIQMTKKGLFLGDTVAEKFIVE
>NZ_ALQT01000015.1|WP_001241816.1|55695_56076_-|hypothetical-protein
MRLWHQDIIELLPRQQLLGQHRECCALRGNGWGRKHETVDYVFRYSPYRLFAYHQLVMEEMMERGYRVSKEWLIAEYRGMKCPRYDTLNPVDLETPIYPEHNQDYLQECLWNLKAKGIDLPINKIK
>NZ_ALQT01000015.1|WP_000159234.1|56100_56472_-|YbgA-family-protein
MTKEAELLWAKHKYLVLSKSQKIYLDIRQTLKSPNCTVLDVQSLIDQAVLLEESPSQVTNAYMHIWGYFKNKAERQEKEEFLTLLEKYRKTGYQRRKLLAFLKQLLAKYPNSYLQNSSIFEEE

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_ALQT01000015_1	1.2\|44536\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder	44536-44565	30	MK448790	Streptococcus phage Javan515, complete genome	1426-1455	0	1.0
NZ_ALQT01000015_1	1.2\|44536\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder	44536-44565	30	MK448957	Streptococcus phage Javan484, complete genome	1422-1451	0	1.0
NZ_ALQT01000015_1	1.3\|44602\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder	44602-44631	30	MK448711	Streptococcus phage Javan235, complete genome	7584-7613	0	1.0
NZ_ALQT01000015_1	1.6\|44800\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44800-44829	30	MK448971	Streptococcus phage Javan52, complete genome	15323-15352	0	1.0
NZ_ALQT01000015_1	1.6\|44800\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44800-44829	30	MK448829	Streptococcus phage Javan7, complete genome	11857-11886	0	1.0
NZ_ALQT01000015_1	1.6\|44800\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44800-44829	30	MK448736	Streptococcus phage Javan35, complete genome	13006-13035	0	1.0
NZ_ALQT01000015_1	1.6\|44800\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44800-44829	30	MK448956	Streptococcus phage Javan48, complete genome	13910-13939	0	1.0
NZ_ALQT01000015_1	1.6\|44800\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44800-44829	30	MK448781	Streptococcus phage Javan5, complete genome	15028-15057	0	1.0
NZ_ALQT01000015_1	1.6\|44800\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44800-44829	30	MK448749	Streptococcus phage Javan39, complete genome	13910-13939	0	1.0
NZ_ALQT01000015_1	1.6\|44800\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44800-44829	30	MH853355	Streptococcus phage LF1, complete genome	2714-2743	0	1.0
NZ_ALQT01000015_1	1.6\|44800\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44800-44829	30	MK448938	Streptococcus phage Javan44, complete genome	13007-13036	0	1.0
NZ_ALQT01000015_1	1.6\|44800\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44800-44829	30	MH853356	Streptococcus phage LF2, partial genome	4076-4105	0	1.0
NZ_ALQT01000015_1	1.6\|44800\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44800-44829	30	MK448911	Streptococcus phage Javan34, complete genome	13006-13035	0	1.0
NZ_ALQT01000015_1	1.6\|44800\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44800-44829	30	MK448742	Streptococcus phage Javan37, complete genome	13505-13534	0	1.0
NZ_ALQT01000015_1	1.6\|44800\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44800-44829	30	MH853358	Streptococcus phage LF4, complete genome	2714-2743	0	1.0
NZ_ALQT01000015_1	1.6\|44800\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44800-44829	30	MK448916	Streptococcus phage Javan36, complete genome	13006-13035	0	1.0
NZ_ALQT01000015_1	1.10\|45064\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	45064-45093	30	JX409894	Streptococcus phage LYGO9, complete genome	37492-37521	0	1.0
NZ_ALQT01000015_1	1.11\|45130\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	45130-45159	30	MK448795	Streptococcus phage Javan527, complete genome	723-752	0	1.0
NZ_ALQT01000015_1	1.13\|45262\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	45262-45291	30	JX409894	Streptococcus phage LYGO9, complete genome	12056-12085	0	1.0
NZ_ALQT01000015_1	1.13\|45262\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	45262-45291	30	MK448956	Streptococcus phage Javan48, complete genome	35058-35087	0	1.0
NZ_ALQT01000015_1	1.13\|45262\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	45262-45291	30	MK448749	Streptococcus phage Javan39, complete genome	36640-36669	0	1.0
NZ_ALQT01000015_1	1.13\|45262\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	45262-45291	30	JX409895	Streptococcus phage JX01, complete genome	23903-23932	0	1.0
NZ_ALQT01000015_1	1.13\|45262\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	45262-45291	30	MH853356	Streptococcus phage LF2, partial genome	26338-26367	0	1.0
NZ_ALQT01000015_1	1.17\|45526\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	45526-45555	30	MK448971	Streptococcus phage Javan52, complete genome	25506-25535	0	1.0
NZ_ALQT01000015_1	1.17\|45526\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	45526-45555	30	MK448956	Streptococcus phage Javan48, complete genome	23825-23854	0	1.0
NZ_ALQT01000015_1	1.18\|45592\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder	45592-45621	30	MK448729	Streptococcus phage Javan31, complete genome	12725-12754	0	1.0
NZ_ALQT01000015_1	1.18\|45592\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder	45592-45621	30	MK448691	Streptococcus phage Javan17, complete genome	12725-12754	0	1.0
NZ_ALQT01000015_1	1.18\|45592\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder	45592-45621	30	MK448948	Streptococcus phage Javan46, complete genome	12725-12754	0	1.0
NZ_ALQT01000015_1	1.18\|45592\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder	45592-45621	30	MK448768	Streptococcus phage Javan47, complete genome	13870-13899	0	1.0
NZ_ALQT01000015_1	1.19\|45658\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder	45658-45687	30	MK448871	Streptococcus phage Javan196, complete genome	2167-2196	0	1.0
NZ_ALQT01000015_1	1.19\|45658\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder	45658-45687	30	MK448976	Streptococcus phage Javan528, complete genome	2167-2196	0	1.0
NZ_ALQT01000015_1	1.19\|45658\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder	45658-45687	30	MK448961	Streptococcus phage Javan494, complete genome	2167-2196	0	1.0
NZ_ALQT01000015_1	1.19\|45658\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder	45658-45687	30	MK448697	Streptococcus phage Javan185, complete genome	2167-2196	0	1.0
NZ_ALQT01000015_1	1.19\|45658\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder	45658-45687	30	MK448693	Streptococcus phage Javan177, complete genome	2167-2196	0	1.0
NZ_ALQT01000015_1	1.19\|45658\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder	45658-45687	30	MK448855	Streptococcus phage Javan150, complete genome	2131-2160	0	1.0
NZ_ALQT01000015_1	1.19\|45658\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder	45658-45687	30	MK448729	Streptococcus phage Javan31, complete genome	2446-2475	0	1.0
NZ_ALQT01000015_1	1.19\|45658\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder	45658-45687	30	MK448696	Streptococcus phage Javan183, complete genome	2167-2196	0	1.0
NZ_ALQT01000015_1	1.19\|45658\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder	45658-45687	30	MK448837	Streptococcus phage Javan10, complete genome	2446-2475	0	1.0
NZ_ALQT01000015_1	1.19\|45658\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder	45658-45687	30	MK448868	Streptococcus phage Javan188, complete genome	2167-2196	0	1.0
NZ_ALQT01000015_1	1.19\|45658\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder	45658-45687	30	MK448691	Streptococcus phage Javan17, complete genome	2446-2475	0	1.0
NZ_ALQT01000015_1	1.19\|45658\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder	45658-45687	30	MK448866	Streptococcus phage Javan184, complete genome	2167-2196	0	1.0
NZ_ALQT01000015_1	1.19\|45658\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder	45658-45687	30	MK448699	Streptococcus phage Javan189, complete genome	2167-2196	0	1.0
NZ_ALQT01000015_1	1.19\|45658\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder	45658-45687	30	MK448867	Streptococcus phage Javan186, complete genome	2167-2196	0	1.0
NZ_ALQT01000015_1	1.19\|45658\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder	45658-45687	30	MK448948	Streptococcus phage Javan46, complete genome	2446-2475	0	1.0
NZ_ALQT01000015_1	1.19\|45658\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder	45658-45687	30	MK448768	Streptococcus phage Javan47, complete genome	2446-2475	0	1.0
NZ_ALQT01000015_1	1.21\|45790\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder	45790-45819	30	MK448723	Streptococcus phage Javan271, complete genome	22813-22842	0	1.0
NZ_ALQT01000015_1	1.23\|45659\|29\|NZ_ALQT01000015\|PILER-CR	45659-45687	29	MK448871	Streptococcus phage Javan196, complete genome	2168-2196	0	1.0
NZ_ALQT01000015_1	1.23\|45659\|29\|NZ_ALQT01000015\|PILER-CR	45659-45687	29	MK448976	Streptococcus phage Javan528, complete genome	2168-2196	0	1.0
NZ_ALQT01000015_1	1.23\|45659\|29\|NZ_ALQT01000015\|PILER-CR	45659-45687	29	MK448961	Streptococcus phage Javan494, complete genome	2168-2196	0	1.0
NZ_ALQT01000015_1	1.23\|45659\|29\|NZ_ALQT01000015\|PILER-CR	45659-45687	29	MK448697	Streptococcus phage Javan185, complete genome	2168-2196	0	1.0
NZ_ALQT01000015_1	1.23\|45659\|29\|NZ_ALQT01000015\|PILER-CR	45659-45687	29	MK448693	Streptococcus phage Javan177, complete genome	2168-2196	0	1.0
NZ_ALQT01000015_1	1.23\|45659\|29\|NZ_ALQT01000015\|PILER-CR	45659-45687	29	MK448855	Streptococcus phage Javan150, complete genome	2132-2160	0	1.0
NZ_ALQT01000015_1	1.23\|45659\|29\|NZ_ALQT01000015\|PILER-CR	45659-45687	29	MK448729	Streptococcus phage Javan31, complete genome	2447-2475	0	1.0
NZ_ALQT01000015_1	1.23\|45659\|29\|NZ_ALQT01000015\|PILER-CR	45659-45687	29	MK448696	Streptococcus phage Javan183, complete genome	2168-2196	0	1.0
NZ_ALQT01000015_1	1.23\|45659\|29\|NZ_ALQT01000015\|PILER-CR	45659-45687	29	MK448837	Streptococcus phage Javan10, complete genome	2447-2475	0	1.0
NZ_ALQT01000015_1	1.23\|45659\|29\|NZ_ALQT01000015\|PILER-CR	45659-45687	29	MK448868	Streptococcus phage Javan188, complete genome	2168-2196	0	1.0
NZ_ALQT01000015_1	1.23\|45659\|29\|NZ_ALQT01000015\|PILER-CR	45659-45687	29	MK448691	Streptococcus phage Javan17, complete genome	2447-2475	0	1.0
NZ_ALQT01000015_1	1.23\|45659\|29\|NZ_ALQT01000015\|PILER-CR	45659-45687	29	MK448866	Streptococcus phage Javan184, complete genome	2168-2196	0	1.0
NZ_ALQT01000015_1	1.23\|45659\|29\|NZ_ALQT01000015\|PILER-CR	45659-45687	29	MK448699	Streptococcus phage Javan189, complete genome	2168-2196	0	1.0
NZ_ALQT01000015_1	1.23\|45659\|29\|NZ_ALQT01000015\|PILER-CR	45659-45687	29	MK448867	Streptococcus phage Javan186, complete genome	2168-2196	0	1.0
NZ_ALQT01000015_1	1.23\|45659\|29\|NZ_ALQT01000015\|PILER-CR	45659-45687	29	MK448948	Streptococcus phage Javan46, complete genome	2447-2475	0	1.0
NZ_ALQT01000015_1	1.23\|45659\|29\|NZ_ALQT01000015\|PILER-CR	45659-45687	29	MK448768	Streptococcus phage Javan47, complete genome	2447-2475	0	1.0
NZ_ALQT01000015_1	1.25\|45791\|29\|NZ_ALQT01000015\|PILER-CR	45791-45819	29	MK448723	Streptococcus phage Javan271, complete genome	22814-22842	0	1.0
NZ_ALQT01000015_1	1.13\|45262\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	45262-45291	30	MK448971	Streptococcus phage Javan52, complete genome	37042-37071	1	0.967
NZ_ALQT01000015_1	1.13\|45262\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	45262-45291	30	MK448829	Streptococcus phage Javan7, complete genome	31735-31764	1	0.967
NZ_ALQT01000015_1	1.13\|45262\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	45262-45291	30	MH853355	Streptococcus phage LF1, complete genome	22592-22621	1	0.967
NZ_ALQT01000015_1	1.13\|45262\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	45262-45291	30	MH853358	Streptococcus phage LF4, complete genome	22592-22621	1	0.967
NZ_ALQT01000015_1	1.16\|45460\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	45460-45489	30	MK448742	Streptococcus phage Javan37, complete genome	12323-12352	1	0.967
NZ_ALQT01000015_1	1.19\|45658\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder	45658-45687	30	MK448919	Streptococcus phage Javan370, complete genome	1833-1862	1	0.967
NZ_ALQT01000015_1	1.23\|45659\|29\|NZ_ALQT01000015\|PILER-CR	45659-45687	29	MK448919	Streptococcus phage Javan370, complete genome	1834-1862	1	0.966
NZ_ALQT01000015_1	1.4\|44668\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder	44668-44697	30	MK448796	Streptococcus phage Javan53, complete genome	1809-1838	2	0.933
NZ_ALQT01000015_1	1.4\|44668\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder	44668-44697	30	MK448736	Streptococcus phage Javan35, complete genome	1709-1738	2	0.933
NZ_ALQT01000015_1	1.4\|44668\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder	44668-44697	30	MK448781	Streptococcus phage Javan5, complete genome	1709-1738	2	0.933
NZ_ALQT01000015_1	1.4\|44668\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder	44668-44697	30	MK448938	Streptococcus phage Javan44, complete genome	1709-1738	2	0.933
NZ_ALQT01000015_1	1.4\|44668\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder	44668-44697	30	MK448911	Streptococcus phage Javan34, complete genome	1709-1738	2	0.933
NZ_ALQT01000015_1	1.4\|44668\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder	44668-44697	30	MK448916	Streptococcus phage Javan36, complete genome	1709-1738	2	0.933
NZ_ALQT01000015_1	1.10\|45064\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	45064-45093	30	MK448845	Streptococcus phage Javan118, complete genome	8851-8880	2	0.933
NZ_ALQT01000015_1	1.13\|45262\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	45262-45291	30	MK448837	Streptococcus phage Javan10, complete genome	30270-30299	2	0.933
NZ_ALQT01000015_1	1.19\|45658\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder	45658-45687	30	MK448808	Streptococcus phage Javan569, complete genome	3315-3344	2	0.933
NZ_ALQT01000015_1	1.19\|45658\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder	45658-45687	30	MK448807	Streptococcus phage Javan567, complete genome	3312-3341	2	0.933
NZ_ALQT01000015_1	1.19\|45658\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder	45658-45687	30	MK448991	Streptococcus phage Javan590, complete genome	3312-3341	2	0.933
NZ_ALQT01000015_1	1.19\|45658\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder	45658-45687	30	MK448805	Streptococcus phage Javan563, complete genome	3312-3341	2	0.933
NZ_ALQT01000015_1	1.19\|45658\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder	45658-45687	30	NC_022791	Streptococcus phage phiBHN167 complete genome	29442-29471	2	0.933
NZ_ALQT01000015_1	1.23\|45659\|29\|NZ_ALQT01000015\|PILER-CR	45659-45687	29	MK448808	Streptococcus phage Javan569, complete genome	3316-3344	2	0.931
NZ_ALQT01000015_1	1.23\|45659\|29\|NZ_ALQT01000015\|PILER-CR	45659-45687	29	MK448807	Streptococcus phage Javan567, complete genome	3313-3341	2	0.931
NZ_ALQT01000015_1	1.23\|45659\|29\|NZ_ALQT01000015\|PILER-CR	45659-45687	29	MK448991	Streptococcus phage Javan590, complete genome	3313-3341	2	0.931
NZ_ALQT01000015_1	1.23\|45659\|29\|NZ_ALQT01000015\|PILER-CR	45659-45687	29	MK448805	Streptococcus phage Javan563, complete genome	3313-3341	2	0.931
NZ_ALQT01000015_1	1.23\|45659\|29\|NZ_ALQT01000015\|PILER-CR	45659-45687	29	NC_022791	Streptococcus phage phiBHN167 complete genome	29442-29470	2	0.931
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	NC_029030	Streptococcus phage APCM01, complete genome	26945-26974	3	0.9
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	NZ_CP013039	Clostridium perfringens strain JP838 plasmid pJFP838D, complete sequence	32439-32468	3	0.9
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	NC_007772	Clostridium perfringens CPE str. F4969 plasmid pCPF4969, complete sequence	32699-32728	3	0.9
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	NC_007773	Clostridium perfringens plasmid pCPF5603, complete sequence	59440-59469	3	0.9
NZ_ALQT01000015_1	1.19\|45658\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder	45658-45687	30	MK448806	Streptococcus phage Javan565, complete genome	3052-3081	3	0.9
NZ_ALQT01000015_1	1.21\|45790\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder	45790-45819	30	MK448753	Streptococcus phage Javan407, complete genome	23822-23851	3	0.9
NZ_ALQT01000015_1	1.23\|45659\|29\|NZ_ALQT01000015\|PILER-CR	45659-45687	29	MK448806	Streptococcus phage Javan565, complete genome	3053-3081	3	0.897
NZ_ALQT01000015_1	1.25\|45791\|29\|NZ_ALQT01000015\|PILER-CR	45791-45819	29	MK448753	Streptococcus phage Javan407, complete genome	23823-23851	3	0.897
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	NC_029030	Streptococcus phage APCM01, complete genome	21635-21664	4	0.867
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	MT430910	Streptococcus phage smHBZ8, complete genome	10468-10497	4	0.867
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	NC_013940	Deferribacter desulfuricans SSM1 megaplasmid pDF308, complete sequence	70704-70733	4	0.867
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	JN638751	Bacillus phage G, complete genome	406425-406454	4	0.867
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	JN638751	Bacillus phage G, complete genome	463615-463644	4	0.867
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	NZ_CP020426	Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence	68401-68430	4	0.867
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	NZ_CP044539	Borrelia sp. CA690 plasmid cp26, complete sequence	986-1015	4	0.867
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	NZ_CP029155	Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence	107420-107449	4	0.867
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	NZ_MF547664	Clostridioides difficile strain LIBA-6289 plasmid LIBA6289, complete sequence	67340-67369	4	0.867
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	MF547662	Clostridioides phage LIBA6276, complete genome	61273-61302	4	0.867
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	CP011970	Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence	53570-53599	4	0.867
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	LN681537	Clostridium phage phiCD211, complete genome	62432-62461	4	0.867
NZ_ALQT01000015_1	1.3\|44602\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder	44602-44631	30	MK448750	Streptococcus phage Javan393, complete genome	3056-3085	5	0.833
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	DQ386162	Streptococcus phage M102AD, complete genome	26247-26276	5	0.833
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	NC_014824	Ruminococcus albus 7 = DSM 20455 plasmid pRUMAL01, complete sequence	232551-232580	5	0.833
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	NC_013940	Deferribacter desulfuricans SSM1 megaplasmid pDF308, complete sequence	262606-262635	5	0.833
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	NZ_MK275619	Clostridium perfringens strain JXJA17 plasmid p1, complete sequence	44245-44274	5	0.833
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	JN638751	Bacillus phage G, complete genome	448505-448534	5	0.833
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	NZ_AP018501	Lactococcus lactis subsp. cremoris strain C4 plasmid pC42, complete sequence	54076-54105	5	0.833
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	NZ_LT599053	Lactococcus lactis subsp. lactis strain A12 plasmid pA12-4, complete sequence	6337-6366	5	0.833
NZ_ALQT01000015_1	1.23\|45659\|29\|NZ_ALQT01000015\|PILER-CR	45659-45687	29	NZ_CP004876	Bacillus thuringiensis serovar kurstaki str. HD-1 plasmid pBMB299, complete sequence	223176-223204	5	0.828
NZ_ALQT01000015_1	1.23\|45659\|29\|NZ_ALQT01000015\|PILER-CR	45659-45687	29	NC_017203	Bacillus thuringiensis serovar chinensis CT-43 plasmid pCT281, complete sequence	254256-254284	5	0.828
NZ_ALQT01000015_1	1.23\|45659\|29\|NZ_ALQT01000015\|PILER-CR	45659-45687	29	NC_020384	Bacillus thuringiensis serovar thuringiensis str. IS5056 plasmid pIS56-285, complete sequence	258485-258513	5	0.828
NZ_ALQT01000015_1	1.23\|45659\|29\|NZ_ALQT01000015\|PILER-CR	45659-45687	29	NZ_CP011350	Bacillus thuringiensis strain YC-10 plasmid pYC1, complete sequence	624118-624146	5	0.828
NZ_ALQT01000015_1	1.23\|45659\|29\|NZ_ALQT01000015\|PILER-CR	45659-45687	29	NZ_CP015177	Bacillus thuringiensis serovar alesti strain BGSC 4C1 plasmid pBMB267, complete sequence	216308-216336	5	0.828
NZ_ALQT01000015_1	1.23\|45659\|29\|NZ_ALQT01000015\|PILER-CR	45659-45687	29	NZ_CP004861	Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB293, complete sequence	221613-221641	5	0.828
NZ_ALQT01000015_1	1.23\|45659\|29\|NZ_ALQT01000015\|PILER-CR	45659-45687	29	NZ_CP010091	Bacillus thuringiensis serovar galleriae strain 4G5 plasmid pBMB267, complete sequence	235805-235833	5	0.828
NZ_ALQT01000015_1	1.2\|44536\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder	44536-44565	30	NC_018685	Bacillus thuringiensis MC28 plasmid pMC95, complete sequence	82837-82866	6	0.8
NZ_ALQT01000015_1	1.3\|44602\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder	44602-44631	30	KJ018211	Shewanella sp. phage 1/40, complete genome	81048-81077	6	0.8
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	MN693385	Marine virus AFVG_25M376, complete genome	24037-24066	6	0.8
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	MN693400	Marine virus AFVG_25M353, complete genome	24196-24225	6	0.8
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	MH830339	Proteus phage Stubb, complete genome	32527-32556	6	0.8
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	JN638751	Bacillus phage G, complete genome	404143-404172	6	0.8
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	JN638751	Bacillus phage G, complete genome	443276-443305	6	0.8
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	JN638751	Bacillus phage G, complete genome	450190-450219	6	0.8
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	JN638751	Bacillus phage G, complete genome	165505-165534	6	0.8
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	NZ_CP012100	Bacillus thuringiensis strain HS18-1 plasmid pHS18-1, complete sequence	221993-222022	6	0.8
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	NZ_CP043832	Bacillus sp. BS98 plasmid unnamed2	152061-152090	6	0.8
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	CP024686	Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-2-313K, complete sequence	219121-219150	6	0.8
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	NC_018688	Bacillus thuringiensis MC28 plasmid pMC319, complete sequence	159363-159392	6	0.8
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	NZ_CP045608	Bacillus cereus strain SB1 plasmid p2, complete sequence	14645-14674	6	0.8
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	NZ_CP018741	Bacillus cereus strain FORC_047 plasmid pFORC47_1, complete sequence	49269-49298	6	0.8
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	NZ_CP020434	Bacillus sp. FDAARGOS_235 plasmid 1, complete sequence	5618-5647	6	0.8
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	NC_022989	Lactobacillus phage LL-Ku, complete genome	23286-23315	6	0.8
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	NZ_KR611317	Rickettsia endosymbiont of Ixodes pacificus strain Humboldt plasmid pREIP, complete sequence	13670-13699	6	0.8
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	NC_007390	Spiroplasma citri pSci4 plasmid	8416-8445	6	0.8
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	NZ_CP014152	Clostridium botulinum strain BrDura plasmid pRSJ20_1, complete sequence	34667-34696	6	0.8
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	NZ_CP013710	Clostridium botulinum strain F634 plasmid pRSJ2_3, complete sequence	244689-244718	6	0.8
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	NC_019687	Clostridium perfringens plasmid pCpb2-CP1, complete sequence	50562-50591	6	0.8
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	NZ_CP025503	Clostridium perfringens strain EHE-NE18 plasmid pJIR3844, complete sequence	48161-48190	6	0.8
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	NZ_CP031090	Spiroplasma phoeniceum P40 plasmid pSPh387, complete sequence	26215-26244	6	0.8
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	NZ_CP023413	Clostridium perfringens strain LLY_N11 plasmid pLLY_N11_3, complete sequence	37732-37761	6	0.8
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	NC_019257	Clostridium perfringens plasmid pJIR3844, complete sequence	49526-49555	6	0.8
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	KU645528	Acidianus tailed spindle virus isolate 1, complete genome	34734-34763	6	0.8
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	MN694120	Marine virus AFVG_250M1160, complete genome	48495-48524	6	0.8
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	MH729379	Aerococcus phage vB_AviM_AVP, complete genome	130865-130894	6	0.8
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	NC_021796	Cellulophaga phage phi38:1, complete genome	39041-39070	6	0.8
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	KC821612	Cellulophaga phage phi40:1, complete genome	39037-39066	6	0.8
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	MK250029	Prevotella phage Lak-C1, complete genome	182768-182797	6	0.8
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	MK250016	Prevotella phage Lak-A1, complete genome	223564-223593	6	0.8
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	NZ_CP047653	Bombella sp. KACC 21507 plasmid unnamed1, complete sequence	41526-41555	6	0.8
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	NC_011258	Borrelia recurrentis A1 plasmid pl37, complete sequence	2130-2159	6	0.8
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	NC_014633	Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequence	624073-624102	6	0.8
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	NZ_CP019601	Brachyspira hyodysenteriae strain BH718 plasmid pBH718, complete sequence	14473-14502	6	0.8
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	LC168164	Tenacibaculum phage pT24 DNA, complete genome	79942-79971	6	0.8
NZ_ALQT01000015_1	1.6\|44800\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44800-44829	30	NZ_CP010112	Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-6, complete sequence	193083-193112	6	0.8
NZ_ALQT01000015_1	1.8\|44932\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44932-44961	30	KY065466	Streptococcus phage IPP25, complete genome	30380-30409	6	0.8
NZ_ALQT01000015_1	1.16\|45460\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	45460-45489	30	NZ_CP021671	Bacillus licheniformis strain SRCM100141 plasmid pBL141-1 sequence sequence	17860-17889	6	0.8
NZ_ALQT01000015_1	1.19\|45658\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder	45658-45687	30	NZ_CP004876	Bacillus thuringiensis serovar kurstaki str. HD-1 plasmid pBMB299, complete sequence	223175-223204	6	0.8
NZ_ALQT01000015_1	1.19\|45658\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder	45658-45687	30	NC_017203	Bacillus thuringiensis serovar chinensis CT-43 plasmid pCT281, complete sequence	254255-254284	6	0.8
NZ_ALQT01000015_1	1.19\|45658\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder	45658-45687	30	NC_020384	Bacillus thuringiensis serovar thuringiensis str. IS5056 plasmid pIS56-285, complete sequence	258484-258513	6	0.8
NZ_ALQT01000015_1	1.19\|45658\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder	45658-45687	30	NZ_CP011350	Bacillus thuringiensis strain YC-10 plasmid pYC1, complete sequence	624118-624147	6	0.8
NZ_ALQT01000015_1	1.19\|45658\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder	45658-45687	30	NZ_CP015177	Bacillus thuringiensis serovar alesti strain BGSC 4C1 plasmid pBMB267, complete sequence	216307-216336	6	0.8
NZ_ALQT01000015_1	1.19\|45658\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder	45658-45687	30	NZ_CP004861	Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB293, complete sequence	221612-221641	6	0.8
NZ_ALQT01000015_1	1.19\|45658\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder	45658-45687	30	NZ_CP010091	Bacillus thuringiensis serovar galleriae strain 4G5 plasmid pBMB267, complete sequence	235804-235833	6	0.8
NZ_ALQT01000015_1	1.23\|45659\|29\|NZ_ALQT01000015\|PILER-CR	45659-45687	29	KY065473	Streptococcus phage IPP32, complete genome	3562-3590	6	0.793
NZ_ALQT01000015_1	1.2\|44536\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder	44536-44565	30	NZ_CP034168	Enterococcus avium strain 352 plasmid unnamed, complete sequence	14259-14288	7	0.767
NZ_ALQT01000015_1	1.2\|44536\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder	44536-44565	30	NZ_CP053971	Bacillus thuringiensis strain FDAARGOS_796 plasmid unnamed3, complete sequence	180131-180160	7	0.767
NZ_ALQT01000015_1	1.2\|44536\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder	44536-44565	30	NZ_CP013278	Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-3-235K, complete sequence	130740-130769	7	0.767
NZ_ALQT01000015_1	1.2\|44536\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder	44536-44565	30	NC_018509	Bacillus thuringiensis HD-789 plasmid pBTHD789-2, complete sequence	124624-124653	7	0.767
NZ_ALQT01000015_1	1.2\|44536\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder	44536-44565	30	NZ_CP039724	Bacillus thuringiensis strain BT-59 plasmid p3, complete sequence	2565-2594	7	0.767
NZ_ALQT01000015_1	1.2\|44536\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder	44536-44565	30	NZ_CP051859	Bacillus thuringiensis serovar israelensis strain BGSC 4Q7rifR plasmid pBtic235, complete sequence	1843-1872	7	0.767
NZ_ALQT01000015_1	1.2\|44536\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder	44536-44565	30	NZ_CP009347	Bacillus thuringiensis HD1002 plasmid 3, complete sequence	40599-40628	7	0.767
NZ_ALQT01000015_1	1.2\|44536\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder	44536-44565	30	NC_015417	Clostridium botulinum BKT015925 plasmid p1BKT015925, complete sequence	153049-153078	7	0.767
NZ_ALQT01000015_1	1.2\|44536\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder	44536-44565	30	NZ_CP045025	Bacillus thuringiensis strain JW-1 plasmid p3, complete sequence	130740-130769	7	0.767
NZ_ALQT01000015_1	1.4\|44668\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder	44668-44697	30	MN399336	Edwardsiella phage vB_EtaM_ET-ABTNL-9, complete genome	82194-82223	7	0.767
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	NC_029030	Streptococcus phage APCM01, complete genome	26513-26542	7	0.767
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	NC_013940	Deferribacter desulfuricans SSM1 megaplasmid pDF308, complete sequence	156970-156999	7	0.767
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	MT679222	Proteus phage 2, complete genome	101983-102012	7	0.767
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	MT679223	Proteus phage 1, complete genome	102240-102269	7	0.767
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	MT740245	Proteus phage M4H10_20, complete genome	104517-104546	7	0.767
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	MH830339	Proteus phage Stubb, complete genome	102267-102296	7	0.767
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	MG030347	Proteus phage PM135, complete genome	8-37	7	0.767
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	JN638751	Bacillus phage G, complete genome	298141-298170	7	0.767
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	JN638751	Bacillus phage G, complete genome	465419-465448	7	0.767
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	JN638751	Bacillus phage G, complete genome	401709-401738	7	0.767
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	JN638751	Bacillus phage G, complete genome	424299-424328	7	0.767
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	MN935203	UNVERIFIED: Proteus phage VTCCBPA139, partial genome	94514-94543	7	0.767
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	NZ_KT897276	Clostridium botulinum strain INGR16-02E1 plasmid pINGR16-02E1, complete sequence	83046-83075	7	0.767
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	NZ_KT897280	Clostridium botulinum strain FI1111E1 plasmid pFI1111E1, complete sequence	92679-92708	7	0.767
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	NZ_KT897275	Clostridium botulinum strain IFR 12/29 plasmid p12/29, complete sequence	87969-87998	7	0.767
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	NZ_KT897277	Clostridium botulinum strain ST0210E1 plasmid pST0210E1, complete sequence	83046-83075	7	0.767
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	NZ_KT897278	Clostridium botulinum strain FWSKR40E1 plasmid pFWSKR40E1, complete sequence	90104-90133	7	0.767
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	NZ_KT897279	Clostridium botulinum strain SWKR38E2 plasmid pSWKR38E2, complete sequence	91240-91269	7	0.767
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	MT757399	Enterococcus phage AE4_17, complete genome	131-160	7	0.767
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	MN694758	Marine virus AFVG_250M853, complete genome	211-240	7	0.767
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	MN694758	Marine virus AFVG_250M853, complete genome	33721-33750	7	0.767
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	MN693989	Marine virus AFVG_250M851, complete genome	92-121	7	0.767
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	MN693989	Marine virus AFVG_250M851, complete genome	33698-33727	7	0.767
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	MT747434	Enterococcus phage ZEF1, complete genome	126-155	7	0.767
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	MN694077	Marine virus AFVG_250M852, complete genome	211-240	7	0.767
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	MN694077	Marine virus AFVG_250M852, complete genome	33725-33754	7	0.767
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	KJ564037	Lactobacillus phage Ld17, complete genome	24923-24952	7	0.767
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	NZ_CP009640	Bacillus cereus 03BB108 plasmid pBFI_3, complete sequence	75855-75884	7	0.767
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	NZ_CP053961	Bacillus cereus strain FDAARGOS_802 plasmid unnamed1, complete sequence	23809-23838	7	0.767
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	MN694673	Marine virus AFVG_250M602, complete genome	997-1026	7	0.767
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	LT615366	Enterococcus phage VPE25 genome assembly, chromosome: VPE25	22346-22375	7	0.767
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	LT546029	Enterococcus phage VFW genome assembly, chromosome: VFW	22278-22307	7	0.767
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	MT774394	CrAssphage cr271_1, complete genome	10230-10259	7	0.767
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	CAJCJZ010000002	Enterococcus phage vB_EfaS_140 genome assembly, contig: phage140-genome, whole genome shotgun sequence	61632-61661	7	0.767
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	LT546030	Enterococcus phage VPE25 genome assembly, chromosome: I	22346-22375	7	0.767
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	MT119361	Enterococus phage vipetofem, complete genome	62933-62962	7	0.767
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	NZ_CP017110	Lactobacillus salivarius strain CICC23174 plasmid pLS_3, complete sequence	26909-26938	7	0.767
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	NC_017078	Selenomonas ruminantium subsp. lactilytica TAM6421 plasmid pSRC1, complete sequence	189936-189965	7	0.767
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	NC_021623	Borrelia hermsii strain HS1 plasmid lp174, complete sequence	96161-96190	7	0.767
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	NC_007107	Bacillus cereus E33L plasmid pE33L9, complete sequence	1685-1714	7	0.767
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	NC_010379	Clostridium botulinum B1 str. Okra plasmid pCLD, complete sequence	55321-55350	7	0.767
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	NZ_CP018060	Moraxella catarrhalis strain CCRI-195ME plasmid unnamed, complete sequence	2487-2516	7	0.767
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	NZ_CP014350	Borrelia hermsii HS1 isolate Browne Mountain plasmid megaplasmid, complete sequence	100862-100891	7	0.767
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	CP024685	Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-1-490K, complete sequence	317024-317053	7	0.767
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	NC_012654	Clostridium botulinum Ba4 str. 657 plasmid pCLJ, complete sequence	132785-132814	7	0.767
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	NZ_CP019601	Brachyspira hyodysenteriae strain BH718 plasmid pBH718, complete sequence	15635-15664	7	0.767
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	NZ_CP019601	Brachyspira hyodysenteriae strain BH718 plasmid pBH718, complete sequence	16012-16041	7	0.767
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	NZ_CP031095	Clostridium botulinum strain CFSAN034200 plasmid p1_CDC51232, complete sequence	249369-249398	7	0.767
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	NZ_CP009969	Bacillus cereus E33L plasmid pBCO_3, complete sequence	7185-7214	7	0.767
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	NZ_CP011156	Bacillus cereus strain HN001 plasmid pRML01, complete sequence	323025-323054	7	0.767
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	NC_015417	Clostridium botulinum BKT015925 plasmid p1BKT015925, complete sequence	158856-158885	7	0.767
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	NC_012226	Brachyspira hyodysenteriae WA1 plasmid pBHWA1, complete sequence	21865-21894	7	0.767
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	NC_012226	Brachyspira hyodysenteriae WA1 plasmid pBHWA1, complete sequence	22242-22271	7	0.767
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	NZ_CP016085	Brachyspira hyodysenteriae ATCC 27164 strain B-78 plasmid pBhyoB78, complete sequence	3925-3954	7	0.767
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	NZ_CP016085	Brachyspira hyodysenteriae ATCC 27164 strain B-78 plasmid pBhyoB78, complete sequence	4302-4331	7	0.767
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	CP037991	Bacillus mycoides strain TH26 plasmid unnamed1, complete sequence	72665-72694	7	0.767
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	MN694585	Marine virus AFVG_250M655, complete genome	2200-2229	7	0.767
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	MN850601	Escherichia phage inny, complete genome	39906-39935	7	0.767
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	MN694795	Marine virus AFVG_250M739, complete genome	2137-2166	7	0.767
NZ_ALQT01000015_1	1.7\|44866\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44866-44895	30	MN602266	Bacteriophage DSS3_VP1, complete genome	51181-51210	7	0.767
NZ_ALQT01000015_1	1.14\|45328\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	45328-45357	30	KJ019154	Synechococcus phage ACG-2014b isolate Syn7803C28, complete genome	59907-59936	7	0.767
NZ_ALQT01000015_1	1.14\|45328\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	45328-45357	30	KJ019040	Synechococcus phage ACG-2014b isolate Syn7803C61, complete genome	59819-59848	7	0.767
NZ_ALQT01000015_1	1.14\|45328\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	45328-45357	30	KJ019044	Synechococcus phage ACG-2014b isolate Syn7803C69, complete genome	59907-59936	7	0.767
NZ_ALQT01000015_1	1.14\|45328\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	45328-45357	30	KJ019108	Synechococcus phage ACG-2014b isolate Syn7803US53, complete genome	59819-59848	7	0.767
NZ_ALQT01000015_1	1.14\|45328\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	45328-45357	30	KJ019061	Synechococcus phage ACG-2014b isolate Syn7803C92, complete genome	59819-59848	7	0.767
NZ_ALQT01000015_1	1.14\|45328\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	45328-45357	30	KJ019132	Synechococcus phage ACG-2014b isolate Syn9311C1, complete genome	59810-59839	7	0.767
NZ_ALQT01000015_1	1.14\|45328\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	45328-45357	30	KJ019041	Synechococcus phage ACG-2014b isolate Syn7803C66, complete genome	59898-59927	7	0.767
NZ_ALQT01000015_1	1.14\|45328\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	45328-45357	30	KJ019051	Synechococcus phage ACG-2014b isolate Syn7803C78, complete genome	59914-59943	7	0.767
NZ_ALQT01000015_1	1.14\|45328\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	45328-45357	30	KJ019109	Synechococcus phage ACG-2014b isolate Syn7803US54, complete genome	59819-59848	7	0.767
NZ_ALQT01000015_1	1.14\|45328\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	45328-45357	30	KJ019043	Synechococcus phage ACG-2014b isolate Syn7803C68, complete genome	59819-59848	7	0.767
NZ_ALQT01000015_1	1.14\|45328\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	45328-45357	30	KJ019161	Synechococcus phage ACG-2014b isolate Syn7803C36, complete genome	59815-59844	7	0.767
NZ_ALQT01000015_1	1.14\|45328\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	45328-45357	30	KJ019049	Synechococcus phage ACG-2014b isolate Syn7803C76, complete genome	59914-59943	7	0.767
NZ_ALQT01000015_1	1.14\|45328\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	45328-45357	30	KJ019060	Synechococcus phage ACG-2014b isolate Syn7803C91, complete genome	59914-59943	7	0.767
NZ_ALQT01000015_1	1.14\|45328\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	45328-45357	30	NC_047719	Synechococcus phage ACG-2014b isolate Syn9311C4, complete genome	60391-60420	7	0.767
NZ_ALQT01000015_1	1.14\|45328\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	45328-45357	30	KJ019110	Synechococcus phage ACG-2014b isolate Syn7803US56, complete genome	59914-59943	7	0.767
NZ_ALQT01000015_1	1.14\|45328\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	45328-45357	30	KJ019134	Synechococcus phage ACG-2014b isolate Syn7803C100, complete genome	59914-59943	7	0.767
NZ_ALQT01000015_1	1.14\|45328\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	45328-45357	30	KJ019104	Synechococcus phage ACG-2014b isolate Syn7803US49, complete genome	59819-59848	7	0.767
NZ_ALQT01000015_1	1.14\|45328\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	45328-45357	30	KJ019042	Synechococcus phage ACG-2014b isolate Syn7803C67, complete genome	59816-59845	7	0.767
NZ_ALQT01000015_1	1.16\|45460\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	45460-45489	30	NZ_CP045267	Bacillus megaterium strain FDU301 plasmid pFDU301E, complete sequence	6410-6439	7	0.767
NZ_ALQT01000015_1	1.18\|45592\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder	45592-45621	30	NZ_CP022992	Paraburkholderia aromaticivorans strain BN5 plasmid pBN2, complete sequence	348631-348660	7	0.767
NZ_ALQT01000015_1	1.18\|45592\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder	45592-45621	30	NZ_CP022993	Paraburkholderia aromaticivorans strain BN5 plasmid pBN3, complete sequence	81984-82013	7	0.767
NZ_ALQT01000015_1	1.19\|45658\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder	45658-45687	30	KY065473	Streptococcus phage IPP32, complete genome	3561-3590	7	0.767
NZ_ALQT01000015_1	1.20\|45724\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder	45724-45753	30	MN693667	Marine virus AFVG_250M836, complete genome	39076-39105	7	0.767
NZ_ALQT01000015_1	1.20\|45724\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder	45724-45753	30	MN694543	Marine virus AFVG_250M1151, complete genome	226-255	7	0.767
NZ_ALQT01000015_1	1.20\|45724\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder	45724-45753	30	MN694516	Marine virus AFVG_250M1152, complete genome	228-257	7	0.767
NZ_ALQT01000015_1	1.24\|45725\|29\|NZ_ALQT01000015\|PILER-CR	45725-45753	29	MN693667	Marine virus AFVG_250M836, complete genome	39077-39105	7	0.759
NZ_ALQT01000015_1	1.24\|45725\|29\|NZ_ALQT01000015\|PILER-CR	45725-45753	29	MN694543	Marine virus AFVG_250M1151, complete genome	226-254	7	0.759
NZ_ALQT01000015_1	1.24\|45725\|29\|NZ_ALQT01000015\|PILER-CR	45725-45753	29	MN694516	Marine virus AFVG_250M1152, complete genome	228-256	7	0.759
NZ_ALQT01000015_1	1.2\|44536\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder	44536-44565	30	NC_018878	Bacillus thuringiensis Bt407 plasmid BTB_502p, complete sequence	27063-27092	8	0.733
NZ_ALQT01000015_1	1.2\|44536\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder	44536-44565	30	NC_048665	Clostridium phage phiCDHM14, complete genome	22262-22291	8	0.733
NZ_ALQT01000015_1	1.2\|44536\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder	44536-44565	30	KU057941	Clostridium phage CDSH1, complete genome	28658-28687	8	0.733
NZ_ALQT01000015_1	1.2\|44536\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder	44536-44565	30	MK473382	Clostridium phage JD032, complete genome	12174-12203	8	0.733
NZ_ALQT01000015_1	1.2\|44536\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder	44536-44565	30	LN881738	Escherichia phage slur17, complete genome	33369-33398	8	0.733
NZ_ALQT01000015_1	1.2\|44536\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder	44536-44565	30	NC_028905	Clostridium phage phiCD111, complete genome	28432-28461	8	0.733
NZ_ALQT01000015_1	1.2\|44536\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder	44536-44565	30	HG796225	Clostridium phage phiCDHM13 complete genome	21762-21791	8	0.733
NZ_ALQT01000015_1	1.2\|44536\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder	44536-44565	30	LN681538	Clostridium phage phiCD481-1, complete genome	21502-21531	8	0.733
NZ_ALQT01000015_1	1.2\|44536\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder	44536-44565	30	HG798901	Clostridium phage phiCDHM11 complete genome	21762-21791	8	0.733
NZ_ALQT01000015_1	1.4\|44668\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder	44668-44697	30	NZ_MF925335	Edwardsiella tarda strain 150611-1 plasmid p150611 1B-1, complete sequence	2614-2643	8	0.733
NZ_ALQT01000015_1	1.4\|44668\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder	44668-44697	30	NC_011668	Shewanella baltica OS223 plasmid pS22302, complete sequence	56767-56796	8	0.733
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	NZ_CP013844	Clostridium botulinum strain A634 plasmid pRSJ19_2, complete sequence	21848-21877	8	0.733
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	NC_018878	Bacillus thuringiensis Bt407 plasmid BTB_502p, complete sequence	198238-198267	8	0.733
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	NZ_AP019843	Leptotrichia wadei strain JMUB3936 plasmid pJMUB3934p2, complete sequence	17895-17924	8	0.733
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	NC_047948	Staphylococcus phage phiSA_BS2, complete genome	40273-40302	8	0.733
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	MK250023	Prevotella phage Lak-B4, complete genome	428788-428817	8	0.733
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	MH078572	Staphylococcus phage phiSA_BS1, complete genome	139347-139376	8	0.733
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	NZ_CP013615	Clostridium perfringens strain JP838 plasmid pJFP838A, complete sequence	193524-193553	8	0.733
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	NZ_CP013615	Clostridium perfringens strain JP838 plasmid pJFP838A, complete sequence	319727-319756	8	0.733
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	NZ_CP022249	Staphylococcus epidermidis strain ATCC 12228 plasmid pAMT1, complete sequence	1611-1640	8	0.733
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	NZ_CP022249	Staphylococcus epidermidis strain ATCC 12228 plasmid pAMT1, complete sequence	15320-15349	8	0.733
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	NZ_CP016589	Bacillus thuringiensis strain KNU-07 plasmid pBTKNU07-01, complete sequence	24240-24269	8	0.733
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	MN694637	Marine virus AFVG_250M580, complete genome	934-963	8	0.733
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	MK250021	Prevotella phage Lak-B2, complete genome	429578-429607	8	0.733
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	MH622943	Myoviridae sp. isolate ctbc_4, complete genome	170878-170907	8	0.733
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	MK504443	Lactobacillus phage 521B, complete genome	51718-51747	8	0.733
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	MT119360	Enterococcus phage nattely, complete genome	22454-22483	8	0.733
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	KC699836	Bacillus phage SIOphi, partial genome	121843-121872	8	0.733
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	NC_029073	Geobacillus virus E3, complete genome	122426-122455	8	0.733
NZ_ALQT01000015_1	1.8\|44932\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44932-44961	30	NZ_CP017461	Staphylococcus nepalensis strain JS1 plasmid pSNJS101, complete sequence	54424-54453	8	0.733
NZ_ALQT01000015_1	1.8\|44932\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44932-44961	30	NZ_CP006989	Rhizobium sp. IE4771 plasmid pRetIE4771c, complete sequence	115731-115760	8	0.733
NZ_ALQT01000015_1	1.16\|45460\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	45460-45489	30	MN693975	Marine virus AFVG_250M1117, complete genome	25102-25131	8	0.733
NZ_ALQT01000015_1	1.19\|45658\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder	45658-45687	30	NZ_CP021785	Acinetobacter baumannii strain A85 plasmid pA85-1b, complete sequence	891-920	8	0.733
NZ_ALQT01000015_1	1.23\|45659\|29\|NZ_ALQT01000015\|PILER-CR	45659-45687	29	NZ_CP021785	Acinetobacter baumannii strain A85 plasmid pA85-1b, complete sequence	892-920	8	0.724
NZ_ALQT01000015_1	1.2\|44536\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder	44536-44565	30	NC_028838	Clostridium phage phiCD506, complete genome	22083-22112	9	0.7
NZ_ALQT01000015_1	1.2\|44536\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder	44536-44565	30	HM568888	Clostridium phage phiCD38-2, complete genome	28154-28183	9	0.7
NZ_ALQT01000015_1	1.2\|44536\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder	44536-44565	30	NC_028958	Clostridium phage phiCD146, complete genome	27716-27745	9	0.7
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	NC_015712	Clostridium perfringens plasmid pCPPB-1, complete sequence	17408-17437	9	0.7
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	JN638751	Bacillus phage G, complete genome	438980-439009	9	0.7
NZ_ALQT01000015_1	1.11\|45130\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	45130-45159	30	NZ_CP017263	Lactobacillus paracasei strain FAM18149 plasmid pFAM18149.22, complete sequence	33302-33331	9	0.7
NZ_ALQT01000015_1	1.14\|45328\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	45328-45357	30	MN855815	Bacteriophage sp. isolate 146, partial genome	1390-1419	9	0.7
NZ_ALQT01000015_1	1.16\|45460\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	45460-45489	30	NZ_CP032695	Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525c, complete sequence	1200386-1200415	9	0.7
NZ_ALQT01000015_1	1.16\|45460\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	45460-45489	30	MH319731	Marine virus AG-345-E02 Ga0172268_11 genomic sequence	82456-82485	9	0.7
NZ_ALQT01000015_1	1.16\|45460\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	45460-45489	30	GU071094	Synechococcus phage S-SM1, complete genome	171168-171197	9	0.7
NZ_ALQT01000015_1	1.18\|45592\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder	45592-45621	30	NZ_CP017750	Cupriavidus sp. USMAA2-4 plasmid unnamed1, complete sequence	81105-81134	9	0.7
NZ_ALQT01000015_1	1.2\|44536\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder	44536-44565	30	NC_014633	Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequence	640927-640956	10	0.667
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	NC_013940	Deferribacter desulfuricans SSM1 megaplasmid pDF308, complete sequence	70710-70739	10	0.667
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	NZ_MK275626	Clostridium perfringens strain JXJA17 plasmid p8, complete sequence	1343-1372	10	0.667
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	NZ_MK275626	Clostridium perfringens strain JXJA17 plasmid p8, complete sequence	1337-1366	10	0.667
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	NZ_CP044539	Borrelia sp. CA690 plasmid cp26, complete sequence	992-1021	10	0.667
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	LC557520	Staphylococcus phage vB_SsapH-Golestan101-M DNA, complete genome	66131-66160	10	0.667
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	NC_012226	Brachyspira hyodysenteriae WA1 plasmid pBHWA1, complete sequence	23403-23432	12	0.6
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	NZ_CP016085	Brachyspira hyodysenteriae ATCC 27164 strain B-78 plasmid pBhyoB78, complete sequence	5463-5492	12	0.6
NZ_ALQT01000015_1	1.5\|44734\|30\|NZ_ALQT01000015\|CRT,CRISPRCasFinder,PILER-CR	44734-44763	30	NZ_CP044537	Borrelia sp. CA690 plasmid lp28-4, complete sequence	1315-1344	18	0.4

1. spacer 1.2|44536|30|NZ_ALQT01000015|CRT,CRISPRCasFinder matches to MK448790 (Streptococcus phage Javan515, complete genome) position: , mismatch: 0, identity: 1.0

gatggagtgttagaagaattaaaaagaaga	CRISPR spacer
gatggagtgttagaagaattaaaaagaaga	Protospacer
******************************

2. spacer 1.2|44536|30|NZ_ALQT01000015|CRT,CRISPRCasFinder matches to MK448957 (Streptococcus phage Javan484, complete genome) position: , mismatch: 0, identity: 1.0

gatggagtgttagaagaattaaaaagaaga	CRISPR spacer
gatggagtgttagaagaattaaaaagaaga	Protospacer
******************************

3. spacer 1.3|44602|30|NZ_ALQT01000015|CRT,CRISPRCasFinder matches to MK448711 (Streptococcus phage Javan235, complete genome) position: , mismatch: 0, identity: 1.0

tcaacatgcttacttagagcatctcgctga	CRISPR spacer
tcaacatgcttacttagagcatctcgctga	Protospacer
******************************

4. spacer 1.6|44800|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to MK448971 (Streptococcus phage Javan52, complete genome) position: , mismatch: 0, identity: 1.0

gtagtgaaaacacatattgtaaaagtatta	CRISPR spacer
gtagtgaaaacacatattgtaaaagtatta	Protospacer
******************************

5. spacer 1.6|44800|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to MK448829 (Streptococcus phage Javan7, complete genome) position: , mismatch: 0, identity: 1.0

gtagtgaaaacacatattgtaaaagtatta	CRISPR spacer
gtagtgaaaacacatattgtaaaagtatta	Protospacer
******************************

6. spacer 1.6|44800|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to MK448736 (Streptococcus phage Javan35, complete genome) position: , mismatch: 0, identity: 1.0

gtagtgaaaacacatattgtaaaagtatta	CRISPR spacer
gtagtgaaaacacatattgtaaaagtatta	Protospacer
******************************

7. spacer 1.6|44800|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to MK448956 (Streptococcus phage Javan48, complete genome) position: , mismatch: 0, identity: 1.0

gtagtgaaaacacatattgtaaaagtatta	CRISPR spacer
gtagtgaaaacacatattgtaaaagtatta	Protospacer
******************************

8. spacer 1.6|44800|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to MK448781 (Streptococcus phage Javan5, complete genome) position: , mismatch: 0, identity: 1.0

gtagtgaaaacacatattgtaaaagtatta	CRISPR spacer
gtagtgaaaacacatattgtaaaagtatta	Protospacer
******************************

9. spacer 1.6|44800|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to MK448749 (Streptococcus phage Javan39, complete genome) position: , mismatch: 0, identity: 1.0

gtagtgaaaacacatattgtaaaagtatta	CRISPR spacer
gtagtgaaaacacatattgtaaaagtatta	Protospacer
******************************

10. spacer 1.6|44800|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to MH853355 (Streptococcus phage LF1, complete genome) position: , mismatch: 0, identity: 1.0

gtagtgaaaacacatattgtaaaagtatta	CRISPR spacer
gtagtgaaaacacatattgtaaaagtatta	Protospacer
******************************

11. spacer 1.6|44800|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to MK448938 (Streptococcus phage Javan44, complete genome) position: , mismatch: 0, identity: 1.0

gtagtgaaaacacatattgtaaaagtatta	CRISPR spacer
gtagtgaaaacacatattgtaaaagtatta	Protospacer
******************************

12. spacer 1.6|44800|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to MH853356 (Streptococcus phage LF2, partial genome) position: , mismatch: 0, identity: 1.0

gtagtgaaaacacatattgtaaaagtatta	CRISPR spacer
gtagtgaaaacacatattgtaaaagtatta	Protospacer
******************************

13. spacer 1.6|44800|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to MK448911 (Streptococcus phage Javan34, complete genome) position: , mismatch: 0, identity: 1.0

gtagtgaaaacacatattgtaaaagtatta	CRISPR spacer
gtagtgaaaacacatattgtaaaagtatta	Protospacer
******************************

14. spacer 1.6|44800|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to MK448742 (Streptococcus phage Javan37, complete genome) position: , mismatch: 0, identity: 1.0

gtagtgaaaacacatattgtaaaagtatta	CRISPR spacer
gtagtgaaaacacatattgtaaaagtatta	Protospacer
******************************

15. spacer 1.6|44800|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to MH853358 (Streptococcus phage LF4, complete genome) position: , mismatch: 0, identity: 1.0

gtagtgaaaacacatattgtaaaagtatta	CRISPR spacer
gtagtgaaaacacatattgtaaaagtatta	Protospacer
******************************

16. spacer 1.6|44800|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to MK448916 (Streptococcus phage Javan36, complete genome) position: , mismatch: 0, identity: 1.0

gtagtgaaaacacatattgtaaaagtatta	CRISPR spacer
gtagtgaaaacacatattgtaaaagtatta	Protospacer
******************************

17. spacer 1.10|45064|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to JX409894 (Streptococcus phage LYGO9, complete genome) position: , mismatch: 0, identity: 1.0

tcacaggtttacttggtggcgtggaattca	CRISPR spacer
tcacaggtttacttggtggcgtggaattca	Protospacer
******************************

18. spacer 1.11|45130|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to MK448795 (Streptococcus phage Javan527, complete genome) position: , mismatch: 0, identity: 1.0

tcaatttaattaaacaaccactcaatatga	CRISPR spacer
tcaatttaattaaacaaccactcaatatga	Protospacer
******************************

19. spacer 1.13|45262|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to JX409894 (Streptococcus phage LYGO9, complete genome) position: , mismatch: 0, identity: 1.0

tcctctatcggttttaacggcaatcaattg	CRISPR spacer
tcctctatcggttttaacggcaatcaattg	Protospacer
******************************

20. spacer 1.13|45262|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to MK448956 (Streptococcus phage Javan48, complete genome) position: , mismatch: 0, identity: 1.0

tcctctatcggttttaacggcaatcaattg	CRISPR spacer
tcctctatcggttttaacggcaatcaattg	Protospacer
******************************

21. spacer 1.13|45262|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to MK448749 (Streptococcus phage Javan39, complete genome) position: , mismatch: 0, identity: 1.0

tcctctatcggttttaacggcaatcaattg	CRISPR spacer
tcctctatcggttttaacggcaatcaattg	Protospacer
******************************

22. spacer 1.13|45262|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to JX409895 (Streptococcus phage JX01, complete genome) position: , mismatch: 0, identity: 1.0

tcctctatcggttttaacggcaatcaattg	CRISPR spacer
tcctctatcggttttaacggcaatcaattg	Protospacer
******************************

23. spacer 1.13|45262|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to MH853356 (Streptococcus phage LF2, partial genome) position: , mismatch: 0, identity: 1.0

tcctctatcggttttaacggcaatcaattg	CRISPR spacer
tcctctatcggttttaacggcaatcaattg	Protospacer
******************************

24. spacer 1.17|45526|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to MK448971 (Streptococcus phage Javan52, complete genome) position: , mismatch: 0, identity: 1.0

aagaagcggagagacggttaaaagtgccgt	CRISPR spacer
aagaagcggagagacggttaaaagtgccgt	Protospacer
******************************

25. spacer 1.17|45526|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to MK448956 (Streptococcus phage Javan48, complete genome) position: , mismatch: 0, identity: 1.0

aagaagcggagagacggttaaaagtgccgt	CRISPR spacer
aagaagcggagagacggttaaaagtgccgt	Protospacer
******************************

26. spacer 1.18|45592|30|NZ_ALQT01000015|CRT,CRISPRCasFinder matches to MK448729 (Streptococcus phage Javan31, complete genome) position: , mismatch: 0, identity: 1.0

catactgggctttcttgaccgcttccagat	CRISPR spacer
catactgggctttcttgaccgcttccagat	Protospacer
******************************

27. spacer 1.18|45592|30|NZ_ALQT01000015|CRT,CRISPRCasFinder matches to MK448691 (Streptococcus phage Javan17, complete genome) position: , mismatch: 0, identity: 1.0

catactgggctttcttgaccgcttccagat	CRISPR spacer
catactgggctttcttgaccgcttccagat	Protospacer
******************************

28. spacer 1.18|45592|30|NZ_ALQT01000015|CRT,CRISPRCasFinder matches to MK448948 (Streptococcus phage Javan46, complete genome) position: , mismatch: 0, identity: 1.0

catactgggctttcttgaccgcttccagat	CRISPR spacer
catactgggctttcttgaccgcttccagat	Protospacer
******************************

29. spacer 1.18|45592|30|NZ_ALQT01000015|CRT,CRISPRCasFinder matches to MK448768 (Streptococcus phage Javan47, complete genome) position: , mismatch: 0, identity: 1.0

catactgggctttcttgaccgcttccagat	CRISPR spacer
catactgggctttcttgaccgcttccagat	Protospacer
******************************

30. spacer 1.19|45658|30|NZ_ALQT01000015|CRT,CRISPRCasFinder matches to MK448871 (Streptococcus phage Javan196, complete genome) position: , mismatch: 0, identity: 1.0

aaatacactctataagttgaaaactcaaaa	CRISPR spacer
aaatacactctataagttgaaaactcaaaa	Protospacer
******************************

31. spacer 1.19|45658|30|NZ_ALQT01000015|CRT,CRISPRCasFinder matches to MK448976 (Streptococcus phage Javan528, complete genome) position: , mismatch: 0, identity: 1.0

aaatacactctataagttgaaaactcaaaa	CRISPR spacer
aaatacactctataagttgaaaactcaaaa	Protospacer
******************************

32. spacer 1.19|45658|30|NZ_ALQT01000015|CRT,CRISPRCasFinder matches to MK448961 (Streptococcus phage Javan494, complete genome) position: , mismatch: 0, identity: 1.0

aaatacactctataagttgaaaactcaaaa	CRISPR spacer
aaatacactctataagttgaaaactcaaaa	Protospacer
******************************

33. spacer 1.19|45658|30|NZ_ALQT01000015|CRT,CRISPRCasFinder matches to MK448697 (Streptococcus phage Javan185, complete genome) position: , mismatch: 0, identity: 1.0

aaatacactctataagttgaaaactcaaaa	CRISPR spacer
aaatacactctataagttgaaaactcaaaa	Protospacer
******************************

34. spacer 1.19|45658|30|NZ_ALQT01000015|CRT,CRISPRCasFinder matches to MK448693 (Streptococcus phage Javan177, complete genome) position: , mismatch: 0, identity: 1.0

aaatacactctataagttgaaaactcaaaa	CRISPR spacer
aaatacactctataagttgaaaactcaaaa	Protospacer
******************************

35. spacer 1.19|45658|30|NZ_ALQT01000015|CRT,CRISPRCasFinder matches to MK448855 (Streptococcus phage Javan150, complete genome) position: , mismatch: 0, identity: 1.0

aaatacactctataagttgaaaactcaaaa	CRISPR spacer
aaatacactctataagttgaaaactcaaaa	Protospacer
******************************

36. spacer 1.19|45658|30|NZ_ALQT01000015|CRT,CRISPRCasFinder matches to MK448729 (Streptococcus phage Javan31, complete genome) position: , mismatch: 0, identity: 1.0

aaatacactctataagttgaaaactcaaaa	CRISPR spacer
aaatacactctataagttgaaaactcaaaa	Protospacer
******************************

37. spacer 1.19|45658|30|NZ_ALQT01000015|CRT,CRISPRCasFinder matches to MK448696 (Streptococcus phage Javan183, complete genome) position: , mismatch: 0, identity: 1.0

aaatacactctataagttgaaaactcaaaa	CRISPR spacer
aaatacactctataagttgaaaactcaaaa	Protospacer
******************************

38. spacer 1.19|45658|30|NZ_ALQT01000015|CRT,CRISPRCasFinder matches to MK448837 (Streptococcus phage Javan10, complete genome) position: , mismatch: 0, identity: 1.0

aaatacactctataagttgaaaactcaaaa	CRISPR spacer
aaatacactctataagttgaaaactcaaaa	Protospacer
******************************

39. spacer 1.19|45658|30|NZ_ALQT01000015|CRT,CRISPRCasFinder matches to MK448868 (Streptococcus phage Javan188, complete genome) position: , mismatch: 0, identity: 1.0

aaatacactctataagttgaaaactcaaaa	CRISPR spacer
aaatacactctataagttgaaaactcaaaa	Protospacer
******************************

40. spacer 1.19|45658|30|NZ_ALQT01000015|CRT,CRISPRCasFinder matches to MK448691 (Streptococcus phage Javan17, complete genome) position: , mismatch: 0, identity: 1.0

aaatacactctataagttgaaaactcaaaa	CRISPR spacer
aaatacactctataagttgaaaactcaaaa	Protospacer
******************************

41. spacer 1.19|45658|30|NZ_ALQT01000015|CRT,CRISPRCasFinder matches to MK448866 (Streptococcus phage Javan184, complete genome) position: , mismatch: 0, identity: 1.0

aaatacactctataagttgaaaactcaaaa	CRISPR spacer
aaatacactctataagttgaaaactcaaaa	Protospacer
******************************

42. spacer 1.19|45658|30|NZ_ALQT01000015|CRT,CRISPRCasFinder matches to MK448699 (Streptococcus phage Javan189, complete genome) position: , mismatch: 0, identity: 1.0

aaatacactctataagttgaaaactcaaaa	CRISPR spacer
aaatacactctataagttgaaaactcaaaa	Protospacer
******************************

43. spacer 1.19|45658|30|NZ_ALQT01000015|CRT,CRISPRCasFinder matches to MK448867 (Streptococcus phage Javan186, complete genome) position: , mismatch: 0, identity: 1.0

aaatacactctataagttgaaaactcaaaa	CRISPR spacer
aaatacactctataagttgaaaactcaaaa	Protospacer
******************************

44. spacer 1.19|45658|30|NZ_ALQT01000015|CRT,CRISPRCasFinder matches to MK448948 (Streptococcus phage Javan46, complete genome) position: , mismatch: 0, identity: 1.0

aaatacactctataagttgaaaactcaaaa	CRISPR spacer
aaatacactctataagttgaaaactcaaaa	Protospacer
******************************

45. spacer 1.19|45658|30|NZ_ALQT01000015|CRT,CRISPRCasFinder matches to MK448768 (Streptococcus phage Javan47, complete genome) position: , mismatch: 0, identity: 1.0

aaatacactctataagttgaaaactcaaaa	CRISPR spacer
aaatacactctataagttgaaaactcaaaa	Protospacer
******************************

46. spacer 1.21|45790|30|NZ_ALQT01000015|CRT,CRISPRCasFinder matches to MK448723 (Streptococcus phage Javan271, complete genome) position: , mismatch: 0, identity: 1.0

agtgttattgtattacttatcattttacga	CRISPR spacer
agtgttattgtattacttatcattttacga	Protospacer
******************************

47. spacer 1.23|45659|29|NZ_ALQT01000015|PILER-CR matches to MK448871 (Streptococcus phage Javan196, complete genome) position: , mismatch: 0, identity: 1.0

aaatacactctataagttgaaaactcaaa	CRISPR spacer
aaatacactctataagttgaaaactcaaa	Protospacer
*****************************

48. spacer 1.23|45659|29|NZ_ALQT01000015|PILER-CR matches to MK448976 (Streptococcus phage Javan528, complete genome) position: , mismatch: 0, identity: 1.0

aaatacactctataagttgaaaactcaaa	CRISPR spacer
aaatacactctataagttgaaaactcaaa	Protospacer
*****************************

49. spacer 1.23|45659|29|NZ_ALQT01000015|PILER-CR matches to MK448961 (Streptococcus phage Javan494, complete genome) position: , mismatch: 0, identity: 1.0

aaatacactctataagttgaaaactcaaa	CRISPR spacer
aaatacactctataagttgaaaactcaaa	Protospacer
*****************************

50. spacer 1.23|45659|29|NZ_ALQT01000015|PILER-CR matches to MK448697 (Streptococcus phage Javan185, complete genome) position: , mismatch: 0, identity: 1.0

aaatacactctataagttgaaaactcaaa	CRISPR spacer
aaatacactctataagttgaaaactcaaa	Protospacer
*****************************

51. spacer 1.23|45659|29|NZ_ALQT01000015|PILER-CR matches to MK448693 (Streptococcus phage Javan177, complete genome) position: , mismatch: 0, identity: 1.0

aaatacactctataagttgaaaactcaaa	CRISPR spacer
aaatacactctataagttgaaaactcaaa	Protospacer
*****************************

52. spacer 1.23|45659|29|NZ_ALQT01000015|PILER-CR matches to MK448855 (Streptococcus phage Javan150, complete genome) position: , mismatch: 0, identity: 1.0

aaatacactctataagttgaaaactcaaa	CRISPR spacer
aaatacactctataagttgaaaactcaaa	Protospacer
*****************************

53. spacer 1.23|45659|29|NZ_ALQT01000015|PILER-CR matches to MK448729 (Streptococcus phage Javan31, complete genome) position: , mismatch: 0, identity: 1.0

aaatacactctataagttgaaaactcaaa	CRISPR spacer
aaatacactctataagttgaaaactcaaa	Protospacer
*****************************

54. spacer 1.23|45659|29|NZ_ALQT01000015|PILER-CR matches to MK448696 (Streptococcus phage Javan183, complete genome) position: , mismatch: 0, identity: 1.0

aaatacactctataagttgaaaactcaaa	CRISPR spacer
aaatacactctataagttgaaaactcaaa	Protospacer
*****************************

55. spacer 1.23|45659|29|NZ_ALQT01000015|PILER-CR matches to MK448837 (Streptococcus phage Javan10, complete genome) position: , mismatch: 0, identity: 1.0

aaatacactctataagttgaaaactcaaa	CRISPR spacer
aaatacactctataagttgaaaactcaaa	Protospacer
*****************************

56. spacer 1.23|45659|29|NZ_ALQT01000015|PILER-CR matches to MK448868 (Streptococcus phage Javan188, complete genome) position: , mismatch: 0, identity: 1.0

aaatacactctataagttgaaaactcaaa	CRISPR spacer
aaatacactctataagttgaaaactcaaa	Protospacer
*****************************

57. spacer 1.23|45659|29|NZ_ALQT01000015|PILER-CR matches to MK448691 (Streptococcus phage Javan17, complete genome) position: , mismatch: 0, identity: 1.0

aaatacactctataagttgaaaactcaaa	CRISPR spacer
aaatacactctataagttgaaaactcaaa	Protospacer
*****************************

58. spacer 1.23|45659|29|NZ_ALQT01000015|PILER-CR matches to MK448866 (Streptococcus phage Javan184, complete genome) position: , mismatch: 0, identity: 1.0

aaatacactctataagttgaaaactcaaa	CRISPR spacer
aaatacactctataagttgaaaactcaaa	Protospacer
*****************************

59. spacer 1.23|45659|29|NZ_ALQT01000015|PILER-CR matches to MK448699 (Streptococcus phage Javan189, complete genome) position: , mismatch: 0, identity: 1.0

aaatacactctataagttgaaaactcaaa	CRISPR spacer
aaatacactctataagttgaaaactcaaa	Protospacer
*****************************

60. spacer 1.23|45659|29|NZ_ALQT01000015|PILER-CR matches to MK448867 (Streptococcus phage Javan186, complete genome) position: , mismatch: 0, identity: 1.0

aaatacactctataagttgaaaactcaaa	CRISPR spacer
aaatacactctataagttgaaaactcaaa	Protospacer
*****************************

61. spacer 1.23|45659|29|NZ_ALQT01000015|PILER-CR matches to MK448948 (Streptococcus phage Javan46, complete genome) position: , mismatch: 0, identity: 1.0

aaatacactctataagttgaaaactcaaa	CRISPR spacer
aaatacactctataagttgaaaactcaaa	Protospacer
*****************************

62. spacer 1.23|45659|29|NZ_ALQT01000015|PILER-CR matches to MK448768 (Streptococcus phage Javan47, complete genome) position: , mismatch: 0, identity: 1.0

aaatacactctataagttgaaaactcaaa	CRISPR spacer
aaatacactctataagttgaaaactcaaa	Protospacer
*****************************

63. spacer 1.25|45791|29|NZ_ALQT01000015|PILER-CR matches to MK448723 (Streptococcus phage Javan271, complete genome) position: , mismatch: 0, identity: 1.0

agtgttattgtattacttatcattttacg	CRISPR spacer
agtgttattgtattacttatcattttacg	Protospacer
*****************************

64. spacer 1.13|45262|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to MK448971 (Streptococcus phage Javan52, complete genome) position: , mismatch: 1, identity: 0.967

tcctctatcggttttaacggcaatcaattg	CRISPR spacer
tcctctatcggttttaacggcaatcaatta	Protospacer
*****************************.

65. spacer 1.13|45262|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to MK448829 (Streptococcus phage Javan7, complete genome) position: , mismatch: 1, identity: 0.967

tcctctatcggttttaacggcaatcaattg	CRISPR spacer
tcctctatcggttttaacggcaatcaatta	Protospacer
*****************************.

66. spacer 1.13|45262|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to MH853355 (Streptococcus phage LF1, complete genome) position: , mismatch: 1, identity: 0.967

tcctctatcggttttaacggcaatcaattg	CRISPR spacer
tcctctatcggttttaacggcaatcaatta	Protospacer
*****************************.

67. spacer 1.13|45262|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to MH853358 (Streptococcus phage LF4, complete genome) position: , mismatch: 1, identity: 0.967

tcctctatcggttttaacggcaatcaattg	CRISPR spacer
tcctctatcggttttaacggcaatcaatta	Protospacer
*****************************.

68. spacer 1.16|45460|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to MK448742 (Streptococcus phage Javan37, complete genome) position: , mismatch: 1, identity: 0.967

acgacttcgttttcttcgatttctgaccat	CRISPR spacer
atgacttcgttttcttcgatttctgaccat	Protospacer
*.****************************

69. spacer 1.19|45658|30|NZ_ALQT01000015|CRT,CRISPRCasFinder matches to MK448919 (Streptococcus phage Javan370, complete genome) position: , mismatch: 1, identity: 0.967

aaatacactctataagttgaaaactcaaaa	CRISPR spacer
aaatacactctataagttgaaatctcaaaa	Protospacer
********************** *******

70. spacer 1.23|45659|29|NZ_ALQT01000015|PILER-CR matches to MK448919 (Streptococcus phage Javan370, complete genome) position: , mismatch: 1, identity: 0.966

aaatacactctataagttgaaaactcaaa	CRISPR spacer
aaatacactctataagttgaaatctcaaa	Protospacer
********************** ******

71. spacer 1.4|44668|30|NZ_ALQT01000015|CRT,CRISPRCasFinder matches to MK448796 (Streptococcus phage Javan53, complete genome) position: , mismatch: 2, identity: 0.933

tcacttgtgaaatatcttcagaagatagaa	CRISPR spacer
tcacttgtgaaatatcctcagaagataaaa	Protospacer
****************.**********.**

72. spacer 1.4|44668|30|NZ_ALQT01000015|CRT,CRISPRCasFinder matches to MK448736 (Streptococcus phage Javan35, complete genome) position: , mismatch: 2, identity: 0.933

tcacttgtgaaatatcttcagaagatagaa	CRISPR spacer
tcacttgtgaaatatcctcagaagataaaa	Protospacer
****************.**********.**

73. spacer 1.4|44668|30|NZ_ALQT01000015|CRT,CRISPRCasFinder matches to MK448781 (Streptococcus phage Javan5, complete genome) position: , mismatch: 2, identity: 0.933

tcacttgtgaaatatcttcagaagatagaa	CRISPR spacer
tcacttgtgaaatatcctcagaagataaaa	Protospacer
****************.**********.**

74. spacer 1.4|44668|30|NZ_ALQT01000015|CRT,CRISPRCasFinder matches to MK448938 (Streptococcus phage Javan44, complete genome) position: , mismatch: 2, identity: 0.933

tcacttgtgaaatatcttcagaagatagaa	CRISPR spacer
tcacttgtgaaatatcctcagaagataaaa	Protospacer
****************.**********.**

75. spacer 1.4|44668|30|NZ_ALQT01000015|CRT,CRISPRCasFinder matches to MK448911 (Streptococcus phage Javan34, complete genome) position: , mismatch: 2, identity: 0.933

tcacttgtgaaatatcttcagaagatagaa	CRISPR spacer
tcacttgtgaaatatcctcagaagataaaa	Protospacer
****************.**********.**

76. spacer 1.4|44668|30|NZ_ALQT01000015|CRT,CRISPRCasFinder matches to MK448916 (Streptococcus phage Javan36, complete genome) position: , mismatch: 2, identity: 0.933

tcacttgtgaaatatcttcagaagatagaa	CRISPR spacer
tcacttgtgaaatatcctcagaagataaaa	Protospacer
****************.**********.**

77. spacer 1.10|45064|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to MK448845 (Streptococcus phage Javan118, complete genome) position: , mismatch: 2, identity: 0.933

tcacaggtttacttggtggcgtggaattca	CRISPR spacer
tcacaggtttaattggtggtgtggaattca	Protospacer
*********** *******.**********

78. spacer 1.13|45262|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to MK448837 (Streptococcus phage Javan10, complete genome) position: , mismatch: 2, identity: 0.933

tcctctatcggttttaacggcaatcaattg	CRISPR spacer
tcctcgatcggttttaatggcaatcaattg	Protospacer
***** ***********.************

79. spacer 1.19|45658|30|NZ_ALQT01000015|CRT,CRISPRCasFinder matches to MK448808 (Streptococcus phage Javan569, complete genome) position: , mismatch: 2, identity: 0.933

aaatacactctataagttgaaaactcaaaa	CRISPR spacer
aaatgcactctataagttaaaaactcaaaa	Protospacer
****.*************.***********

80. spacer 1.19|45658|30|NZ_ALQT01000015|CRT,CRISPRCasFinder matches to MK448807 (Streptococcus phage Javan567, complete genome) position: , mismatch: 2, identity: 0.933

aaatacactctataagttgaaaactcaaaa	CRISPR spacer
aaatgcactctataagttaaaaactcaaaa	Protospacer
****.*************.***********

81. spacer 1.19|45658|30|NZ_ALQT01000015|CRT,CRISPRCasFinder matches to MK448991 (Streptococcus phage Javan590, complete genome) position: , mismatch: 2, identity: 0.933

aaatacactctataagttgaaaactcaaaa	CRISPR spacer
aaatgcactctataagttaaaaactcaaaa	Protospacer
****.*************.***********

82. spacer 1.19|45658|30|NZ_ALQT01000015|CRT,CRISPRCasFinder matches to MK448805 (Streptococcus phage Javan563, complete genome) position: , mismatch: 2, identity: 0.933

aaatacactctataagttgaaaactcaaaa	CRISPR spacer
aaatgcactctataagttaaaaactcaaaa	Protospacer
****.*************.***********

83. spacer 1.19|45658|30|NZ_ALQT01000015|CRT,CRISPRCasFinder matches to NC_022791 (Streptococcus phage phiBHN167 complete genome) position: , mismatch: 2, identity: 0.933

aaatacactctataagttgaaaactcaaaa	CRISPR spacer
aaatacactctataagttgaaatcacaaaa	Protospacer
********************** * *****

84. spacer 1.23|45659|29|NZ_ALQT01000015|PILER-CR matches to MK448808 (Streptococcus phage Javan569, complete genome) position: , mismatch: 2, identity: 0.931

aaatacactctataagttgaaaactcaaa	CRISPR spacer
aaatgcactctataagttaaaaactcaaa	Protospacer
****.*************.**********

85. spacer 1.23|45659|29|NZ_ALQT01000015|PILER-CR matches to MK448807 (Streptococcus phage Javan567, complete genome) position: , mismatch: 2, identity: 0.931

aaatacactctataagttgaaaactcaaa	CRISPR spacer
aaatgcactctataagttaaaaactcaaa	Protospacer
****.*************.**********

86. spacer 1.23|45659|29|NZ_ALQT01000015|PILER-CR matches to MK448991 (Streptococcus phage Javan590, complete genome) position: , mismatch: 2, identity: 0.931

aaatacactctataagttgaaaactcaaa	CRISPR spacer
aaatgcactctataagttaaaaactcaaa	Protospacer
****.*************.**********

87. spacer 1.23|45659|29|NZ_ALQT01000015|PILER-CR matches to MK448805 (Streptococcus phage Javan563, complete genome) position: , mismatch: 2, identity: 0.931

aaatacactctataagttgaaaactcaaa	CRISPR spacer
aaatgcactctataagttaaaaactcaaa	Protospacer
****.*************.**********

88. spacer 1.23|45659|29|NZ_ALQT01000015|PILER-CR matches to NC_022791 (Streptococcus phage phiBHN167 complete genome) position: , mismatch: 2, identity: 0.931

aaatacactctataagttgaaaactcaaa	CRISPR spacer
aaatacactctataagttgaaatcacaaa	Protospacer
********************** * ****

89. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NC_029030 (Streptococcus phage APCM01, complete genome) position: , mismatch: 3, identity: 0.9

tatttctatatttattatataatatattat	CRISPR spacer
tatttctatatatattatataatatatatt	Protospacer
*********** ***************  *

90. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP013039 (Clostridium perfringens strain JP838 plasmid pJFP838D, complete sequence) position: , mismatch: 3, identity: 0.9

tatttct-atatttattatataatatattat	CRISPR spacer
-atttctaattttttttatataatatattat	Protospacer
 ****** ** *** ****************

91. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NC_007772 (Clostridium perfringens CPE str. F4969 plasmid pCPF4969, complete sequence) position: , mismatch: 3, identity: 0.9

tatttct-atatttattatataatatattat	CRISPR spacer
-atttctaattttttttatataatatattat	Protospacer
 ****** ** *** ****************

92. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NC_007773 (Clostridium perfringens plasmid pCPF5603, complete sequence) position: , mismatch: 3, identity: 0.9

tatttct-atatttattatataatatattat	CRISPR spacer
-atttctaattttttttatataatatattat	Protospacer
 ****** ** *** ****************

93. spacer 1.19|45658|30|NZ_ALQT01000015|CRT,CRISPRCasFinder matches to MK448806 (Streptococcus phage Javan565, complete genome) position: , mismatch: 3, identity: 0.9

aaatacactctataagttgaaaactcaaaa	CRISPR spacer
gaatacactttataagttgaaaacacaaaa	Protospacer
.********.************** *****

94. spacer 1.21|45790|30|NZ_ALQT01000015|CRT,CRISPRCasFinder matches to MK448753 (Streptococcus phage Javan407, complete genome) position: , mismatch: 3, identity: 0.9

agtgttattgtattacttatcattttacga	CRISPR spacer
tttgttattgtattacttatcagtttacga	Protospacer
  ******************** *******

95. spacer 1.23|45659|29|NZ_ALQT01000015|PILER-CR matches to MK448806 (Streptococcus phage Javan565, complete genome) position: , mismatch: 3, identity: 0.897

aaatacactctataagttgaaaactcaaa	CRISPR spacer
gaatacactttataagttgaaaacacaaa	Protospacer
.********.************** ****

96. spacer 1.25|45791|29|NZ_ALQT01000015|PILER-CR matches to MK448753 (Streptococcus phage Javan407, complete genome) position: , mismatch: 3, identity: 0.897

agtgttattgtattacttatcattttacg	CRISPR spacer
tttgttattgtattacttatcagtttacg	Protospacer
  ******************** ******

97. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NC_029030 (Streptococcus phage APCM01, complete genome) position: , mismatch: 4, identity: 0.867

tatttctatatttattatataatatattat	CRISPR spacer
tctttctatatatattatataatatatatt	Protospacer
* ********* ***************  *

98. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to MT430910 (Streptococcus phage smHBZ8, complete genome) position: , mismatch: 4, identity: 0.867

tatttctatatttattatataatatattat	CRISPR spacer
tatttctatatatattatatactatatatt	Protospacer
*********** ********* *****  *

99. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NC_013940 (Deferribacter desulfuricans SSM1 megaplasmid pDF308, complete sequence) position: , mismatch: 4, identity: 0.867

-tatttctatatttattatataatatattat	CRISPR spacer
gaatttata-atatattatataatatattat	Protospacer
  **** ** ** ******************

100. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to JN638751 (Bacillus phage G, complete genome) position: , mismatch: 4, identity: 0.867

tatttctatatttattatataatatattat-	CRISPR spacer
tatttatatatttattatataaca-attgtt	Protospacer
***** ****************.* ***.*

101. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to JN638751 (Bacillus phage G, complete genome) position: , mismatch: 4, identity: 0.867

tatttctatatttattatataata-tattat	CRISPR spacer
tatttatatatttattatatcatactacta-	Protospacer
***** ************** *** **.**

102. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP020426 (Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence) position: , mismatch: 4, identity: 0.867

tatttctat-atttattatataatatattat	CRISPR spacer
-ctttttataatttattatataaaatattat	Protospacer
  ***.*** ************* *******

103. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP044539 (Borrelia sp. CA690 plasmid cp26, complete sequence) position: , mismatch: 4, identity: 0.867

tatttctat-atttattatataatatattat	CRISPR spacer
-attaatataatatattatataatatattat	Protospacer
 ***  *** ** ******************

104. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP029155 (Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.867

tatttctat-atttattatataatatattat	CRISPR spacer
-ctttttataatttattatataaaatattat	Protospacer
  ***.*** ************* *******

105. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NZ_MF547664 (Clostridioides difficile strain LIBA-6289 plasmid LIBA6289, complete sequence) position: , mismatch: 4, identity: 0.867

-tatttctatatttattatataatatattat	CRISPR spacer
gtaatttta-atttattatataatattttat	Protospacer
 ** **.** **************** ****

106. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to MF547662 (Clostridioides phage LIBA6276, complete genome) position: , mismatch: 4, identity: 0.867

tatttctat-atttattatataatatattat	CRISPR spacer
-ctttttataatttattatataaaatattat	Protospacer
  ***.*** ************* *******

107. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to CP011970 (Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence) position: , mismatch: 4, identity: 0.867

tatttctat-atttattatataatatattat	CRISPR spacer
-ctttttataatttattatataaaatattat	Protospacer
  ***.*** ************* *******

108. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to LN681537 (Clostridium phage phiCD211, complete genome) position: , mismatch: 4, identity: 0.867

tatttctat-atttattatataatatattat	CRISPR spacer
-ctttttataatttattatataaaatattat	Protospacer
  ***.*** ************* *******

109. spacer 1.3|44602|30|NZ_ALQT01000015|CRT,CRISPRCasFinder matches to MK448750 (Streptococcus phage Javan393, complete genome) position: , mismatch: 5, identity: 0.833

tcaacatgcttacttagagcatctcgctga	CRISPR spacer
tcaacatgtttacttagtgcatctcgagaa	Protospacer
********.******** ********  .*

110. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to DQ386162 (Streptococcus phage M102AD, complete genome) position: , mismatch: 5, identity: 0.833

tatttctatatttattatataatatattat	CRISPR spacer
tatttctatatatattatatactatatgta	Protospacer
*********** ********* *****

111. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NC_014824 (Ruminococcus albus 7 = DSM 20455 plasmid pRUMAL01, complete sequence) position: , mismatch: 5, identity: 0.833

tatttctatatttattatataatatattat	CRISPR spacer
tgtttctatatatattatataatattttga	Protospacer
*.********* ************* **.

112. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NC_013940 (Deferribacter desulfuricans SSM1 megaplasmid pDF308, complete sequence) position: , mismatch: 5, identity: 0.833

tatttctatatttattatataatatattat	CRISPR spacer
ttgctctatattgtttatataatatattat	Protospacer
*  .********  ****************

113. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NZ_MK275619 (Clostridium perfringens strain JXJA17 plasmid p1, complete sequence) position: , mismatch: 5, identity: 0.833

tatttctatatttattatataatatattat	CRISPR spacer
gataattacatttattatataatatattat	Protospacer
 **  .**.*********************

114. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to JN638751 (Bacillus phage G, complete genome) position: , mismatch: 5, identity: 0.833

tatttctatatttattatataata-tattat	CRISPR spacer
tatttatatatttattatatcataccaata-	Protospacer
***** ************** *** .* **

115. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NZ_AP018501 (Lactococcus lactis subsp. cremoris strain C4 plasmid pC42, complete sequence) position: , mismatch: 5, identity: 0.833

tatttctatatttattatataatat-attat	CRISPR spacer
aatttgtatattttttatataatatcagta-	Protospacer
 **** ******* *********** * **

116. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NZ_LT599053 (Lactococcus lactis subsp. lactis strain A12 plasmid pA12-4, complete sequence) position: , mismatch: 5, identity: 0.833

tatttctatatttattatataatat-attat	CRISPR spacer
aatttgtatattttttatataatatcagta-	Protospacer
 **** ******* *********** * **

117. spacer 1.23|45659|29|NZ_ALQT01000015|PILER-CR matches to NZ_CP004876 (Bacillus thuringiensis serovar kurstaki str. HD-1 plasmid pBMB299, complete sequence) position: , mismatch: 5, identity: 0.828

aaatacactctataagttgaaaactcaaa	CRISPR spacer
aaatacactctataagttgaaaaactatc	Protospacer
*********************** ..*

118. spacer 1.23|45659|29|NZ_ALQT01000015|PILER-CR matches to NC_017203 (Bacillus thuringiensis serovar chinensis CT-43 plasmid pCT281, complete sequence) position: , mismatch: 5, identity: 0.828

aaatacactctataagttgaaaactcaaa	CRISPR spacer
aaatacactctataagttgaaaaactatc	Protospacer
*********************** ..*

119. spacer 1.23|45659|29|NZ_ALQT01000015|PILER-CR matches to NC_020384 (Bacillus thuringiensis serovar thuringiensis str. IS5056 plasmid pIS56-285, complete sequence) position: , mismatch: 5, identity: 0.828

aaatacactctataagttgaaaactcaaa	CRISPR spacer
aaatacactctataagttgaaaaactatc	Protospacer
*********************** ..*

120. spacer 1.23|45659|29|NZ_ALQT01000015|PILER-CR matches to NZ_CP011350 (Bacillus thuringiensis strain YC-10 plasmid pYC1, complete sequence) position: , mismatch: 5, identity: 0.828

aaatacactctataagttgaaaactcaaa	CRISPR spacer
aaatacactctataagttgaaaaactatc	Protospacer
*********************** ..*

121. spacer 1.23|45659|29|NZ_ALQT01000015|PILER-CR matches to NZ_CP015177 (Bacillus thuringiensis serovar alesti strain BGSC 4C1 plasmid pBMB267, complete sequence) position: , mismatch: 5, identity: 0.828

aaatacactctataagttgaaaactcaaa	CRISPR spacer
aaatacactctataagttgaaaaactatc	Protospacer
*********************** ..*

122. spacer 1.23|45659|29|NZ_ALQT01000015|PILER-CR matches to NZ_CP004861 (Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB293, complete sequence) position: , mismatch: 5, identity: 0.828

aaatacactctataagttgaaaactcaaa	CRISPR spacer
aaatacactctataagttgaaaaactatc	Protospacer
*********************** ..*

123. spacer 1.23|45659|29|NZ_ALQT01000015|PILER-CR matches to NZ_CP010091 (Bacillus thuringiensis serovar galleriae strain 4G5 plasmid pBMB267, complete sequence) position: , mismatch: 5, identity: 0.828

aaatacactctataagttgaaaactcaaa	CRISPR spacer
aaatacactctataagttgaaaaactatc	Protospacer
*********************** ..*

124. spacer 1.2|44536|30|NZ_ALQT01000015|CRT,CRISPRCasFinder matches to NC_018685 (Bacillus thuringiensis MC28 plasmid pMC95, complete sequence) position: , mismatch: 6, identity: 0.8

gatggagtgttagaagaattaaaaagaaga	CRISPR spacer
aaaggaatgttagaagaattaaaaaatagt	Protospacer
.* ***.******************. **

125. spacer 1.3|44602|30|NZ_ALQT01000015|CRT,CRISPRCasFinder matches to KJ018211 (Shewanella sp. phage 1/40, complete genome) position: , mismatch: 6, identity: 0.8

tcaacatgcttacttagagcatc-tcgctga	CRISPR spacer
tctacatgcttacttatagcatcactactg-	Protospacer
** ************* ****** ...***

126. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to MN693385 (Marine virus AFVG_25M376, complete genome) position: , mismatch: 6, identity: 0.8

tatttctatatttattatataatatattat	CRISPR spacer
ttatattatatatataatataatatattat	Protospacer
*  * .***** *** **************

127. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to MN693400 (Marine virus AFVG_25M353, complete genome) position: , mismatch: 6, identity: 0.8

tatttctatatttattatataatatattat	CRISPR spacer
ttatattatatatataatataatatattat	Protospacer
*  * .***** *** **************

128. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to MH830339 (Proteus phage Stubb, complete genome) position: , mismatch: 6, identity: 0.8

tatttctatatttattatataatatattat	CRISPR spacer
agttcctaaatttattatataatatattta	Protospacer
 .**.*** *******************

129. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to JN638751 (Bacillus phage G, complete genome) position: , mismatch: 6, identity: 0.8

tatttctatatttattatataatatattat	CRISPR spacer
tatttatatatttattatatcatataacta	Protospacer
***** ************** ***** .

130. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to JN638751 (Bacillus phage G, complete genome) position: , mismatch: 6, identity: 0.8

tatttctatatttattatataatatattat	CRISPR spacer
tatttatatatttattatatcatataacta	Protospacer
***** ************** ***** .

131. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to JN638751 (Bacillus phage G, complete genome) position: , mismatch: 6, identity: 0.8

tatttctatatttattatataatatattat	CRISPR spacer
tatttatatatttattatatcatataacta	Protospacer
***** ************** ***** .

132. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to JN638751 (Bacillus phage G, complete genome) position: , mismatch: 6, identity: 0.8

tatttctatatttattatataatatattat	CRISPR spacer
tccttatatatttattatataatattttca	Protospacer
* .** ******************* **

133. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP012100 (Bacillus thuringiensis strain HS18-1 plasmid pHS18-1, complete sequence) position: , mismatch: 6, identity: 0.8

tatttctatatttattatataatatattat	CRISPR spacer
tctttctatatttattctataatttatgca	Protospacer
* ************** ****** ***

134. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP043832 (Bacillus sp. BS98 plasmid unnamed2) position: , mismatch: 6, identity: 0.8

tatttctatatttattatataatatattat	CRISPR spacer
tctttctatatttattctataatttatgta	Protospacer
* ************** ****** ***

135. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to CP024686 (Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-2-313K, complete sequence) position: , mismatch: 6, identity: 0.8

tatttctatatttattatataatatattat	CRISPR spacer
tctttctatatttattctataatttatgca	Protospacer
* ************** ****** ***

136. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NC_018688 (Bacillus thuringiensis MC28 plasmid pMC319, complete sequence) position: , mismatch: 6, identity: 0.8

tatttctatatttattatataatatattat	CRISPR spacer
tctttctatatttattctataatttatgta	Protospacer
* ************** ****** ***

137. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP045608 (Bacillus cereus strain SB1 plasmid p2, complete sequence) position: , mismatch: 6, identity: 0.8

tatttctatatttattatataatatattat	CRISPR spacer
tctttctatatttattctataatttatgca	Protospacer
* ************** ****** ***

138. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP018741 (Bacillus cereus strain FORC_047 plasmid pFORC47_1, complete sequence) position: , mismatch: 6, identity: 0.8

tatttctatatttattatataatatattat	CRISPR spacer
tctttctatatttattctataatttatgta	Protospacer
* ************** ****** ***

139. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP020434 (Bacillus sp. FDAARGOS_235 plasmid 1, complete sequence) position: , mismatch: 6, identity: 0.8

tatttctatatttattatataatatattat	CRISPR spacer
tctttctatatttattctataatttatgta	Protospacer
* ************** ****** ***

140. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NC_022989 (Lactobacillus phage LL-Ku, complete genome) position: , mismatch: 6, identity: 0.8

tatttctatatttattatataatatattat	CRISPR spacer
actttctacatttattatataacatatagt	Protospacer
  ******.*************.**** .*

141. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NZ_KR611317 (Rickettsia endosymbiont of Ixodes pacificus strain Humboldt plasmid pREIP, complete sequence) position: , mismatch: 6, identity: 0.8

tatttctatatttattatataatatattat	CRISPR spacer
tatttctatatatattttataataaagtga	Protospacer
*********** **** ******* * *.

142. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NC_007390 (Spiroplasma citri pSci4 plasmid) position: , mismatch: 6, identity: 0.8

tatttctatatttattatataatatattat	CRISPR spacer
ctttaatataattattatataaaatattat	Protospacer
. **  **** *********** *******

143. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP014152 (Clostridium botulinum strain BrDura plasmid pRSJ20_1, complete sequence) position: , mismatch: 6, identity: 0.8

tatttctatatttattatataatatattat	CRISPR spacer
tttatatatatttattatttaatataataa	Protospacer
* * * ************ ******* **

144. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP013710 (Clostridium botulinum strain F634 plasmid pRSJ2_3, complete sequence) position: , mismatch: 6, identity: 0.8

tatttctatatttattatataatatattat	CRISPR spacer
tttatatatatttattatttaatataataa	Protospacer
* * * ************ ******* **

145. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NC_019687 (Clostridium perfringens plasmid pCpb2-CP1, complete sequence) position: , mismatch: 6, identity: 0.8

tatttctatatttattatataatatattat	CRISPR spacer
tttcaatatattgattatataatttattat	Protospacer
* *.  ****** ********** ******

146. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP025503 (Clostridium perfringens strain EHE-NE18 plasmid pJIR3844, complete sequence) position: , mismatch: 6, identity: 0.8

tatttctatatttattatataatatattat	CRISPR spacer
tttcaatatattgattatataatttattat	Protospacer
* *.  ****** ********** ******

147. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP031090 (Spiroplasma phoeniceum P40 plasmid pSPh387, complete sequence) position: , mismatch: 6, identity: 0.8

tatttctatatttattatataatatattat	CRISPR spacer
ctttaatataattattatataaaatattat	Protospacer
. **  **** *********** *******

148. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP023413 (Clostridium perfringens strain LLY_N11 plasmid pLLY_N11_3, complete sequence) position: , mismatch: 6, identity: 0.8

tatttctatatttattatataatatattat	CRISPR spacer
tttcaatatattgattatataatttattat	Protospacer
* *.  ****** ********** ******

149. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NC_019257 (Clostridium perfringens plasmid pJIR3844, complete sequence) position: , mismatch: 6, identity: 0.8

tatttctatatttattatataatatattat	CRISPR spacer
tttcaatatattgattatataatttattat	Protospacer
* *.  ****** ********** ******

150. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to KU645528 (Acidianus tailed spindle virus isolate 1, complete genome) position: , mismatch: 6, identity: 0.8

tatttctatatttattatataatatattat	CRISPR spacer
aaatactatatttataatgtaatatattaa	Protospacer
 * * ********** **.**********

151. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to MN694120 (Marine virus AFVG_250M1160, complete genome) position: , mismatch: 6, identity: 0.8

tatttctatatttattatataatatattat	CRISPR spacer
tgatattatatatattatatattatattat	Protospacer
*. * .***** ********* ********

152. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to MH729379 (Aerococcus phage vB_AviM_AVP, complete genome) position: , mismatch: 6, identity: 0.8

tatttctatatttattatataatatattat	CRISPR spacer
aatttctaaatttattatatcatatctgaa	Protospacer
 ******* *********** **** * *

153. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NC_021796 (Cellulophaga phage phi38:1, complete genome) position: , mismatch: 6, identity: 0.8

tatttctatatttattatataatatattat	CRISPR spacer
tatatctatatttattatctaataatatac	Protospacer
*** ************** *****   **.

154. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to KC821612 (Cellulophaga phage phi40:1, complete genome) position: , mismatch: 6, identity: 0.8

tatttctatatttattatataatatattat	CRISPR spacer
tatatctatatttattatctaataatatac	Protospacer
*** ************** *****   **.

155. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to MK250029 (Prevotella phage Lak-C1, complete genome) position: , mismatch: 6, identity: 0.8

tatttctatatttattatataatatattat	CRISPR spacer
acttattatatttactatataatgtattat	Protospacer
  ** .********.********.******

156. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to MK250016 (Prevotella phage Lak-A1, complete genome) position: , mismatch: 6, identity: 0.8

tatttctatatttattatataatatattat	CRISPR spacer
acttattatatttactatataatgtattat	Protospacer
  ** .********.********.******

157. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP047653 (Bombella sp. KACC 21507 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.8

tatttctatatttattatataatatattat	CRISPR spacer
aatggcaatatttattataaaatattttat	Protospacer
 **  * ************ ***** ****

158. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NC_011258 (Borrelia recurrentis A1 plasmid pl37, complete sequence) position: , mismatch: 6, identity: 0.8

tatttctatatttattatataatatattat	CRISPR spacer
cattgtaatacttattatatattatattat	Protospacer
.*** . ***.********** ********

159. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NC_014633 (Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequence) position: , mismatch: 6, identity: 0.8

tatttctatatttattatataatatattat	CRISPR spacer
tacgactaaatttattataaaatatatttt	Protospacer
**.  *** ********** ******** *

160. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP019601 (Brachyspira hyodysenteriae strain BH718 plasmid pBH718, complete sequence) position: , mismatch: 6, identity: 0.8

tatttctatatttattatataatatattat-	CRISPR spacer
actttttatatatattatataatat-taata	Protospacer
  ***.***** ************* * **

161. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to LC168164 (Tenacibaculum phage pT24 DNA, complete genome) position: , mismatch: 6, identity: 0.8

tatttctatatttattatataatatattat	CRISPR spacer
tttttatatatttagtatataatattattt	Protospacer
* *** ******** **********  * *

162. spacer 1.6|44800|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP010112 (Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-6, complete sequence) position: , mismatch: 6, identity: 0.8

gtagtgaaaacacatattg----taaaagtatta	CRISPR spacer
gtagtgaaaacatatattgaaaatcaaagt----	Protospacer
************.******    * *****

163. spacer 1.8|44932|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to KY065466 (Streptococcus phage IPP25, complete genome) position: , mismatch: 6, identity: 0.8

acgtctaaaatattatcaaacatagggttg	CRISPR spacer
ccgtctaaaatattattaagcatagctttt	Protospacer
 ***************.**.*****  **

164. spacer 1.16|45460|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP021671 (Bacillus licheniformis strain SRCM100141 plasmid pBL141-1 sequence sequence) position: , mismatch: 6, identity: 0.8

acgacttcgttttcttcgatttctgaccat	CRISPR spacer
aagacttcgttttcatcgatttctggaatt	Protospacer
* ************ **********.   *

165. spacer 1.19|45658|30|NZ_ALQT01000015|CRT,CRISPRCasFinder matches to NZ_CP004876 (Bacillus thuringiensis serovar kurstaki str. HD-1 plasmid pBMB299, complete sequence) position: , mismatch: 6, identity: 0.8

aaatacactctataagttgaaaactcaaaa	CRISPR spacer
aaatacactctataagttgaaaaactatct	Protospacer
*********************** ..*

166. spacer 1.19|45658|30|NZ_ALQT01000015|CRT,CRISPRCasFinder matches to NC_017203 (Bacillus thuringiensis serovar chinensis CT-43 plasmid pCT281, complete sequence) position: , mismatch: 6, identity: 0.8

aaatacactctataagttgaaaactcaaaa	CRISPR spacer
aaatacactctataagttgaaaaactatct	Protospacer
*********************** ..*

167. spacer 1.19|45658|30|NZ_ALQT01000015|CRT,CRISPRCasFinder matches to NC_020384 (Bacillus thuringiensis serovar thuringiensis str. IS5056 plasmid pIS56-285, complete sequence) position: , mismatch: 6, identity: 0.8

aaatacactctataagttgaaaactcaaaa	CRISPR spacer
aaatacactctataagttgaaaaactatct	Protospacer
*********************** ..*

168. spacer 1.19|45658|30|NZ_ALQT01000015|CRT,CRISPRCasFinder matches to NZ_CP011350 (Bacillus thuringiensis strain YC-10 plasmid pYC1, complete sequence) position: , mismatch: 6, identity: 0.8

aaatacactctataagttgaaaactcaaaa	CRISPR spacer
aaatacactctataagttgaaaaactatct	Protospacer
*********************** ..*

169. spacer 1.19|45658|30|NZ_ALQT01000015|CRT,CRISPRCasFinder matches to NZ_CP015177 (Bacillus thuringiensis serovar alesti strain BGSC 4C1 plasmid pBMB267, complete sequence) position: , mismatch: 6, identity: 0.8

aaatacactctataagttgaaaactcaaaa	CRISPR spacer
aaatacactctataagttgaaaaactatct	Protospacer
*********************** ..*

170. spacer 1.19|45658|30|NZ_ALQT01000015|CRT,CRISPRCasFinder matches to NZ_CP004861 (Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB293, complete sequence) position: , mismatch: 6, identity: 0.8

aaatacactctataagttgaaaactcaaaa	CRISPR spacer
aaatacactctataagttgaaaaactatct	Protospacer
*********************** ..*

171. spacer 1.19|45658|30|NZ_ALQT01000015|CRT,CRISPRCasFinder matches to NZ_CP010091 (Bacillus thuringiensis serovar galleriae strain 4G5 plasmid pBMB267, complete sequence) position: , mismatch: 6, identity: 0.8

aaatacactctataagttgaaaactcaaaa	CRISPR spacer
aaatacactctataagttgaaaaactatct	Protospacer
*********************** ..*

172. spacer 1.23|45659|29|NZ_ALQT01000015|PILER-CR matches to KY065473 (Streptococcus phage IPP32, complete genome) position: , mismatch: 6, identity: 0.793

aaatacactctataagttgaaaactcaaa	CRISPR spacer
aaatacactctataagataaaaaattcta	Protospacer
**************** *.**** *.  *

173. spacer 1.2|44536|30|NZ_ALQT01000015|CRT,CRISPRCasFinder matches to NZ_CP034168 (Enterococcus avium strain 352 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.767

gatggagtgttagaagaattaaaaagaaga	CRISPR spacer
aatgcagtattagaagaattaaaaaccaat	Protospacer
.*** ***.****************  *.

174. spacer 1.2|44536|30|NZ_ALQT01000015|CRT,CRISPRCasFinder matches to NZ_CP053971 (Bacillus thuringiensis strain FDAARGOS_796 plasmid unnamed3, complete sequence) position: , mismatch: 7, identity: 0.767

gatggagtgttagaagaattaaaaagaaga	CRISPR spacer
ggcgctttgttagaagagttaaaaacaaga	Protospacer
*..*   **********.******* ****

175. spacer 1.2|44536|30|NZ_ALQT01000015|CRT,CRISPRCasFinder matches to NZ_CP013278 (Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-3-235K, complete sequence) position: , mismatch: 7, identity: 0.767

gatggagtgttagaagaattaaaaagaaga	CRISPR spacer
ggcgctttgttagaagagttaaaaacaaga	Protospacer
*..*   **********.******* ****

176. spacer 1.2|44536|30|NZ_ALQT01000015|CRT,CRISPRCasFinder matches to NC_018509 (Bacillus thuringiensis HD-789 plasmid pBTHD789-2, complete sequence) position: , mismatch: 7, identity: 0.767

gatggagtgttagaagaattaaaaagaaga	CRISPR spacer
ggcgctttgttagaagagttaaaaacaaga	Protospacer
*..*   **********.******* ****

177. spacer 1.2|44536|30|NZ_ALQT01000015|CRT,CRISPRCasFinder matches to NZ_CP039724 (Bacillus thuringiensis strain BT-59 plasmid p3, complete sequence) position: , mismatch: 7, identity: 0.767

gatggagtgttagaagaattaaaaagaaga	CRISPR spacer
ggcgctttgttagaagagttaaaaacaaga	Protospacer
*..*   **********.******* ****

178. spacer 1.2|44536|30|NZ_ALQT01000015|CRT,CRISPRCasFinder matches to NZ_CP051859 (Bacillus thuringiensis serovar israelensis strain BGSC 4Q7rifR plasmid pBtic235, complete sequence) position: , mismatch: 7, identity: 0.767

gatggagtgttagaagaattaaaaagaaga	CRISPR spacer
ggcgctttgttagaagagttaaaaacaaga	Protospacer
*..*   **********.******* ****

179. spacer 1.2|44536|30|NZ_ALQT01000015|CRT,CRISPRCasFinder matches to NZ_CP009347 (Bacillus thuringiensis HD1002 plasmid 3, complete sequence) position: , mismatch: 7, identity: 0.767

gatggagtgttagaagaattaaaaagaaga	CRISPR spacer
ggcgctttgttagaagagttaaaaacaaga	Protospacer
*..*   **********.******* ****

180. spacer 1.2|44536|30|NZ_ALQT01000015|CRT,CRISPRCasFinder matches to NC_015417 (Clostridium botulinum BKT015925 plasmid p1BKT015925, complete sequence) position: , mismatch: 7, identity: 0.767

gatggagtgttagaagaattaaaaagaaga	CRISPR spacer
gaacgagtattagaagaattaaaaaaggaa	Protospacer
**  ****.****************....*

181. spacer 1.2|44536|30|NZ_ALQT01000015|CRT,CRISPRCasFinder matches to NZ_CP045025 (Bacillus thuringiensis strain JW-1 plasmid p3, complete sequence) position: , mismatch: 7, identity: 0.767

gatggagtgttagaagaattaaaaagaaga	CRISPR spacer
ggcgctttgttagaagagttaaaaacaaga	Protospacer
*..*   **********.******* ****

182. spacer 1.4|44668|30|NZ_ALQT01000015|CRT,CRISPRCasFinder matches to MN399336 (Edwardsiella phage vB_EtaM_ET-ABTNL-9, complete genome) position: , mismatch: 7, identity: 0.767

tcacttgtgaaatatcttcagaagatagaa	CRISPR spacer
tcacttgtgtactatcttcagaaaacttac	Protospacer
********* * ***********.*.  *

183. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NC_029030 (Streptococcus phage APCM01, complete genome) position: , mismatch: 7, identity: 0.767

tatttctatatttattatataatatattat	CRISPR spacer
ttatcttatatatattatataatatatatt	Protospacer
*  *..***** ***************  *

184. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NC_013940 (Deferribacter desulfuricans SSM1 megaplasmid pDF308, complete sequence) position: , mismatch: 7, identity: 0.767

tatttctatatttattatataatatattat	CRISPR spacer
aaaatttatatatattatataatattttaa	Protospacer
 *  *.***** ************* ***

185. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to MT679222 (Proteus phage 2, complete genome) position: , mismatch: 7, identity: 0.767

tatttctatatttattatataatatattat	CRISPR spacer
acatactatatttattatataatatatgta	Protospacer
   * **********************

186. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to MT679223 (Proteus phage 1, complete genome) position: , mismatch: 7, identity: 0.767

tatttctatatttattatataatatattat	CRISPR spacer
acatactatatttattatataatatatgta	Protospacer
   * **********************

187. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to MT740245 (Proteus phage M4H10_20, complete genome) position: , mismatch: 7, identity: 0.767

tatttctatatttattatataatatattat	CRISPR spacer
acatactatatttattatataatatatgta	Protospacer
   * **********************

188. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to MH830339 (Proteus phage Stubb, complete genome) position: , mismatch: 7, identity: 0.767

tatttctatatttattatataatatattat	CRISPR spacer
acatactatatttattatataatatatgta	Protospacer
   * **********************

189. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to MG030347 (Proteus phage PM135, complete genome) position: , mismatch: 7, identity: 0.767

tatttctatatttattatataatatattat	CRISPR spacer
acatactatatttattatataatatatgta	Protospacer
   * **********************

190. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to JN638751 (Bacillus phage G, complete genome) position: , mismatch: 7, identity: 0.767

tatttctatatttattatataatatattat	CRISPR spacer
attttttatatttattatttaatataatta	Protospacer
  ***.************ ******* *

191. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to JN638751 (Bacillus phage G, complete genome) position: , mismatch: 7, identity: 0.767

tatttctatatttattatataatatattat	CRISPR spacer
tatttatatatttattatataaaaattgga	Protospacer
***** **************** *  * .

192. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to JN638751 (Bacillus phage G, complete genome) position: , mismatch: 7, identity: 0.767

tatttctatatttattatataatatattat	CRISPR spacer
tatttatatatttattatataccaatatac	Protospacer
***** *************** .*   **.

193. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to JN638751 (Bacillus phage G, complete genome) position: , mismatch: 7, identity: 0.767

tatttctatatttattatataatatattat	CRISPR spacer
tccttatatatttattatatcatataacaa	Protospacer
* .** ************** ***** .*

194. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to MN935203 (UNVERIFIED: Proteus phage VTCCBPA139, partial genome) position: , mismatch: 7, identity: 0.767

tatttctatatttattatataatatattat	CRISPR spacer
acatactatatttattatataatatatgta	Protospacer
   * **********************

195. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NZ_KT897276 (Clostridium botulinum strain INGR16-02E1 plasmid pINGR16-02E1, complete sequence) position: , mismatch: 7, identity: 0.767

tatttctatatttattatataatatattat	CRISPR spacer
caaaataatatttattatataatatataat	Protospacer
.*   . ******************** **

196. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NZ_KT897280 (Clostridium botulinum strain FI1111E1 plasmid pFI1111E1, complete sequence) position: , mismatch: 7, identity: 0.767

tatttctatatttattatataatatattat	CRISPR spacer
caaaataatatttattatataatatataat	Protospacer
.*   . ******************** **

197. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NZ_KT897275 (Clostridium botulinum strain IFR 12/29 plasmid p12/29, complete sequence) position: , mismatch: 7, identity: 0.767

tatttctatatttattatataatatattat	CRISPR spacer
caaaataatatttattatataatatataat	Protospacer
.*   . ******************** **

198. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NZ_KT897277 (Clostridium botulinum strain ST0210E1 plasmid pST0210E1, complete sequence) position: , mismatch: 7, identity: 0.767

tatttctatatttattatataatatattat	CRISPR spacer
caaaataatatttattatataatatataat	Protospacer
.*   . ******************** **

199. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NZ_KT897278 (Clostridium botulinum strain FWSKR40E1 plasmid pFWSKR40E1, complete sequence) position: , mismatch: 7, identity: 0.767

tatttctatatttattatataatatattat	CRISPR spacer
caaaataatatttattatataatatataat	Protospacer
.*   . ******************** **

200. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NZ_KT897279 (Clostridium botulinum strain SWKR38E2 plasmid pSWKR38E2, complete sequence) position: , mismatch: 7, identity: 0.767

tatttctatatttattatataatatattat	CRISPR spacer
caaaataatatttattatataatatataat	Protospacer
.*   . ******************** **

201. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to MT757399 (Enterococcus phage AE4_17, complete genome) position: , mismatch: 7, identity: 0.767

tatttctatatttattatataatatattat	CRISPR spacer
actttctatattaattatacaatatatata	Protospacer
  ********** ******.*******

202. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to MN694758 (Marine virus AFVG_250M853, complete genome) position: , mismatch: 7, identity: 0.767

tatttctatatttattatataatatattat	CRISPR spacer
ctgttctatatttgttctataatatatttg	Protospacer
.  **********.** ***********

203. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to MN694758 (Marine virus AFVG_250M853, complete genome) position: , mismatch: 7, identity: 0.767

tatttctatatttattatataatatattat	CRISPR spacer
ctgttctatatttgttctataatatatttg	Protospacer
.  **********.** ***********

204. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to MN693989 (Marine virus AFVG_250M851, complete genome) position: , mismatch: 7, identity: 0.767

tatttctatatttattatataatatattat	CRISPR spacer
ctgttctatatttgttctataatatatttg	Protospacer
.  **********.** ***********

205. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to MN693989 (Marine virus AFVG_250M851, complete genome) position: , mismatch: 7, identity: 0.767

tatttctatatttattatataatatattat	CRISPR spacer
ctgttctatatttgttctataatatatttg	Protospacer
.  **********.** ***********

206. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to MT747434 (Enterococcus phage ZEF1, complete genome) position: , mismatch: 7, identity: 0.767

tatttctatatttattatataatatattat	CRISPR spacer
actttctatattaattatacaatatatata	Protospacer
  ********** ******.*******

207. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to MN694077 (Marine virus AFVG_250M852, complete genome) position: , mismatch: 7, identity: 0.767

tatttctatatttattatataatatattat	CRISPR spacer
ctgttctatatttgttctataatatatttg	Protospacer
.  **********.** ***********

208. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to MN694077 (Marine virus AFVG_250M852, complete genome) position: , mismatch: 7, identity: 0.767

tatttctatatttattatataatatattat	CRISPR spacer
ctgttctatatttgttctataatatatttg	Protospacer
.  **********.** ***********

209. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to KJ564037 (Lactobacillus phage Ld17, complete genome) position: , mismatch: 7, identity: 0.767

tatttctatatttattatataatatattat	CRISPR spacer
actttctacatttattatataacatatagc	Protospacer
  ******.*************.**** ..

210. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP009640 (Bacillus cereus 03BB108 plasmid pBFI_3, complete sequence) position: , mismatch: 7, identity: 0.767

tatttctatatttattatataatatattat	CRISPR spacer
aatttctatatctattatatattattcttg	Protospacer
 **********.********* *** .*

211. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP053961 (Bacillus cereus strain FDAARGOS_802 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

tatttctatatttattatataatatattat	CRISPR spacer
aatttctatatctattatatattattcttg	Protospacer
 **********.********* *** .*

212. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to MN694673 (Marine virus AFVG_250M602, complete genome) position: , mismatch: 7, identity: 0.767

tatttctatatttattatataatatattat	CRISPR spacer
tcctgctatattaattatataatatatata	Protospacer
* .* ******* **************

213. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to LT615366 (Enterococcus phage VPE25 genome assembly, chromosome: VPE25) position: , mismatch: 7, identity: 0.767

tatttctatatttattatataatatattat	CRISPR spacer
tatttatatatttattatatactaaaaatg	Protospacer
***** *************** ** *

214. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to LT546029 (Enterococcus phage VFW genome assembly, chromosome: VFW) position: , mismatch: 7, identity: 0.767

tatttctatatttattatataatatattat	CRISPR spacer
tatttatatatttattatatactaaaaatg	Protospacer
***** *************** ** *

215. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to MT774394 (CrAssphage cr271_1, complete genome) position: , mismatch: 7, identity: 0.767

tatttctatatttattatataatatattat	CRISPR spacer
tggagttaaatttattaaataatatattat	Protospacer
*.   .** ******** ************

216. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to CAJCJZ010000002 (Enterococcus phage vB_EfaS_140 genome assembly, contig: phage140-genome, whole genome shotgun sequence) position: , mismatch: 7, identity: 0.767

tatttctatatttattatataatatattat	CRISPR spacer
tatttatatatttattatatactaaaaatg	Protospacer
***** *************** ** *

217. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to LT546030 (Enterococcus phage VPE25 genome assembly, chromosome: I) position: , mismatch: 7, identity: 0.767

tatttctatatttattatataatatattat	CRISPR spacer
tatttatatatttattatatactaaaaatg	Protospacer
***** *************** ** *

218. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to MT119361 (Enterococus phage vipetofem, complete genome) position: , mismatch: 7, identity: 0.767

tatttctatatttattatataatatattat	CRISPR spacer
tatttatatatttattatatactaaaaatg	Protospacer
***** *************** ** *

219. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP017110 (Lactobacillus salivarius strain CICC23174 plasmid pLS_3, complete sequence) position: , mismatch: 7, identity: 0.767

tatttctatatttattatataatatattat	CRISPR spacer
tatttctataattattatatactcaaatgg	Protospacer
********** ********** *  * *.

220. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NC_017078 (Selenomonas ruminantium subsp. lactilytica TAM6421 plasmid pSRC1, complete sequence) position: , mismatch: 7, identity: 0.767

tatttctatatttattatataatatattat	CRISPR spacer
attatatatatttattttataataaattaa	Protospacer
  * * ********** ******* ****

221. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NC_021623 (Borrelia hermsii strain HS1 plasmid lp174, complete sequence) position: , mismatch: 7, identity: 0.767

tatttctatatttattatataatatattat	CRISPR spacer
cgattgaatatttattaaataatatatttt	Protospacer
.. **  ********** ********** *

222. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NC_007107 (Bacillus cereus E33L plasmid pE33L9, complete sequence) position: , mismatch: 7, identity: 0.767

tatttc-tatatttattatataatatattat	CRISPR spacer
-ataacgtatatttatgatataatatatatc	Protospacer
 **  * ********* ***********  .

223. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NC_010379 (Clostridium botulinum B1 str. Okra plasmid pCLD, complete sequence) position: , mismatch: 7, identity: 0.767

tatttctatatttattatataatatattat	CRISPR spacer
cttatatatatttattatttaatataataa	Protospacer
. * * ************ ******* **

224. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP018060 (Moraxella catarrhalis strain CCRI-195ME plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.767

tatttctatatttattatataatatattat	CRISPR spacer
ttatattatatatattatataatgtattaa	Protospacer
*  * .***** ***********.*****

225. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP014350 (Borrelia hermsii HS1 isolate Browne Mountain plasmid megaplasmid, complete sequence) position: , mismatch: 7, identity: 0.767

tatttctatatttattatataatatattat	CRISPR spacer
cgattgaatatttattaaataatatatttt	Protospacer
.. **  ********** ********** *

226. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to CP024685 (Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-1-490K, complete sequence) position: , mismatch: 7, identity: 0.767

tatttctatatttattatataatatattat	CRISPR spacer
gatgttaatatttgttatataatatatttg	Protospacer
 ** *. ******.**************

227. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NC_012654 (Clostridium botulinum Ba4 str. 657 plasmid pCLJ, complete sequence) position: , mismatch: 7, identity: 0.767

tatttctatatttattatataatatattat	CRISPR spacer
cttatatatatttattatttaatataataa	Protospacer
. * * ************ ******* **

228. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP019601 (Brachyspira hyodysenteriae strain BH718 plasmid pBH718, complete sequence) position: , mismatch: 7, identity: 0.767

tatttctatatttattatataatatattat	CRISPR spacer
aagtaatacatttattatataatatatatt	Protospacer
 * *  **.******************  *

229. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP019601 (Brachyspira hyodysenteriae strain BH718 plasmid pBH718, complete sequence) position: , mismatch: 7, identity: 0.767

tatttctatatttattatataatatattat	CRISPR spacer
ttatattatatatattatatattatattaa	Protospacer
*  * .***** ********* *******

230. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP031095 (Clostridium botulinum strain CFSAN034200 plasmid p1_CDC51232, complete sequence) position: , mismatch: 7, identity: 0.767

tatttctatatttattatataatatattat	CRISPR spacer
cttatatatatttattatttaatataataa	Protospacer
. * * ************ ******* **

231. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP009969 (Bacillus cereus E33L plasmid pBCO_3, complete sequence) position: , mismatch: 7, identity: 0.767

tatttc-tatatttattatataatatattat	CRISPR spacer
-ataacgtatatttatgatataatatatatc	Protospacer
 **  * ********* ***********  .

232. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP011156 (Bacillus cereus strain HN001 plasmid pRML01, complete sequence) position: , mismatch: 7, identity: 0.767

tatttctatatttattatataatatattat	CRISPR spacer
gatgttaatatttgttatataatatatttg	Protospacer
 ** *. ******.**************

233. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NC_015417 (Clostridium botulinum BKT015925 plasmid p1BKT015925, complete sequence) position: , mismatch: 7, identity: 0.767

tatttctatatttattatataatatattat	CRISPR spacer
tgttcctatatttattatataattttcatt	Protospacer
*.**.****************** * .  *

234. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NC_012226 (Brachyspira hyodysenteriae WA1 plasmid pBHWA1, complete sequence) position: , mismatch: 7, identity: 0.767

tatttctatatttattatataatatattat	CRISPR spacer
ttatattatatatattatatattatattaa	Protospacer
*  * .***** ********* *******

235. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NC_012226 (Brachyspira hyodysenteriae WA1 plasmid pBHWA1, complete sequence) position: , mismatch: 7, identity: 0.767

tatttctatatttattatataatatattat	CRISPR spacer
aagtaatacatttattatataatatatatt	Protospacer
 * *  **.******************  *

236. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP016085 (Brachyspira hyodysenteriae ATCC 27164 strain B-78 plasmid pBhyoB78, complete sequence) position: , mismatch: 7, identity: 0.767

tatttctatatttattatataatatattat	CRISPR spacer
ttatattatatatattatatattatattaa	Protospacer
*  * .***** ********* *******

237. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP016085 (Brachyspira hyodysenteriae ATCC 27164 strain B-78 plasmid pBhyoB78, complete sequence) position: , mismatch: 7, identity: 0.767

tatttctatatttattatataatatattat	CRISPR spacer
aagtaatacatttattatataatatatatt	Protospacer
 * *  **.******************  *

238. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to CP037991 (Bacillus mycoides strain TH26 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

tatttctatatttattatataatatattat	CRISPR spacer
gatgttaatatttgttatataatatatttg	Protospacer
 ** *. ******.**************

239. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to MN694585 (Marine virus AFVG_250M655, complete genome) position: , mismatch: 7, identity: 0.767

tatttctatatttattatataatatattat	CRISPR spacer
ttatgttatatatattatataatatatatt	Protospacer
*  * .***** ***************  *

240. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to MN850601 (Escherichia phage inny, complete genome) position: , mismatch: 7, identity: 0.767

tatttctatatttattatataatatattat	CRISPR spacer
tcaatagatatttattatttaatttattat	Protospacer
*   *  *********** **** ******

241. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to MN694795 (Marine virus AFVG_250M739, complete genome) position: , mismatch: 7, identity: 0.767

tatttctatatttattatataatatattat	CRISPR spacer
ttatgttatatatattatataatatatatt	Protospacer
*  * .***** ***************  *

242. spacer 1.7|44866|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to MN602266 (Bacteriophage DSS3_VP1, complete genome) position: , mismatch: 7, identity: 0.767

tagtatctcaaataaaattcaacttcactt	CRISPR spacer
ttgtttctcaaatgaaattcaacttgaaag	Protospacer
* ** ********.*********** *

243. spacer 1.14|45328|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to KJ019154 (Synechococcus phage ACG-2014b isolate Syn7803C28, complete genome) position: , mismatch: 7, identity: 0.767

tattcatggaattatcgttatgtttctact	CRISPR spacer
ttactttggaattatcgttatgttgctcct	Protospacer
*  .. ****************** ** **

244. spacer 1.14|45328|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to KJ019040 (Synechococcus phage ACG-2014b isolate Syn7803C61, complete genome) position: , mismatch: 7, identity: 0.767

tattcatggaattatcgttatgtttctact	CRISPR spacer
ttactttggaattatcgttatgttgctcct	Protospacer
*  .. ****************** ** **

245. spacer 1.14|45328|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to KJ019044 (Synechococcus phage ACG-2014b isolate Syn7803C69, complete genome) position: , mismatch: 7, identity: 0.767

tattcatggaattatcgttatgtttctact	CRISPR spacer
ttactttggaattatcgttatgttgctcct	Protospacer
*  .. ****************** ** **

246. spacer 1.14|45328|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to KJ019108 (Synechococcus phage ACG-2014b isolate Syn7803US53, complete genome) position: , mismatch: 7, identity: 0.767

tattcatggaattatcgttatgtttctact	CRISPR spacer
ttactttggaattatcgttatgttgctcct	Protospacer
*  .. ****************** ** **

247. spacer 1.14|45328|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to KJ019061 (Synechococcus phage ACG-2014b isolate Syn7803C92, complete genome) position: , mismatch: 7, identity: 0.767

tattcatggaattatcgttatgtttctact	CRISPR spacer
ttactttggaattatcgttatgttgctcct	Protospacer
*  .. ****************** ** **

248. spacer 1.14|45328|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to KJ019132 (Synechococcus phage ACG-2014b isolate Syn9311C1, complete genome) position: , mismatch: 7, identity: 0.767

tattcatggaattatcgttatgtttctact	CRISPR spacer
ttactttggaattatcgttatgttgctcct	Protospacer
*  .. ****************** ** **

249. spacer 1.14|45328|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to KJ019041 (Synechococcus phage ACG-2014b isolate Syn7803C66, complete genome) position: , mismatch: 7, identity: 0.767

tattcatggaattatcgttatgtttctact	CRISPR spacer
ttactttggaattatcgttatgttgctcct	Protospacer
*  .. ****************** ** **

250. spacer 1.14|45328|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to KJ019051 (Synechococcus phage ACG-2014b isolate Syn7803C78, complete genome) position: , mismatch: 7, identity: 0.767

tattcatggaattatcgttatgtttctact	CRISPR spacer
ttactttggaattatcgttatgttgctcct	Protospacer
*  .. ****************** ** **

251. spacer 1.14|45328|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to KJ019109 (Synechococcus phage ACG-2014b isolate Syn7803US54, complete genome) position: , mismatch: 7, identity: 0.767

tattcatggaattatcgttatgtttctact	CRISPR spacer
ttactttggaattatcgttatgttgctcct	Protospacer
*  .. ****************** ** **

252. spacer 1.14|45328|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to KJ019043 (Synechococcus phage ACG-2014b isolate Syn7803C68, complete genome) position: , mismatch: 7, identity: 0.767

tattcatggaattatcgttatgtttctact	CRISPR spacer
ttactttggaattatcgttatgttgctcct	Protospacer
*  .. ****************** ** **

253. spacer 1.14|45328|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to KJ019161 (Synechococcus phage ACG-2014b isolate Syn7803C36, complete genome) position: , mismatch: 7, identity: 0.767

tattcatggaattatcgttatgtttctact	CRISPR spacer
ttactttggaattatcgttatgttgctcct	Protospacer
*  .. ****************** ** **

254. spacer 1.14|45328|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to KJ019049 (Synechococcus phage ACG-2014b isolate Syn7803C76, complete genome) position: , mismatch: 7, identity: 0.767

tattcatggaattatcgttatgtttctact	CRISPR spacer
ttactttggaattatcgttatgttgctcct	Protospacer
*  .. ****************** ** **

255. spacer 1.14|45328|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to KJ019060 (Synechococcus phage ACG-2014b isolate Syn7803C91, complete genome) position: , mismatch: 7, identity: 0.767

tattcatggaattatcgttatgtttctact	CRISPR spacer
ttactttggaattatcgttatgttgctcct	Protospacer
*  .. ****************** ** **

256. spacer 1.14|45328|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NC_047719 (Synechococcus phage ACG-2014b isolate Syn9311C4, complete genome) position: , mismatch: 7, identity: 0.767

tattcatggaattatcgttatgtttctact	CRISPR spacer
ttactttggaattatcgttatgttgctcct	Protospacer
*  .. ****************** ** **

257. spacer 1.14|45328|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to KJ019110 (Synechococcus phage ACG-2014b isolate Syn7803US56, complete genome) position: , mismatch: 7, identity: 0.767

tattcatggaattatcgttatgtttctact	CRISPR spacer
ttactttggaattatcgttatgttgctcct	Protospacer
*  .. ****************** ** **

258. spacer 1.14|45328|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to KJ019134 (Synechococcus phage ACG-2014b isolate Syn7803C100, complete genome) position: , mismatch: 7, identity: 0.767

tattcatggaattatcgttatgtttctact	CRISPR spacer
ttactttggaattatcgttatgttgctcct	Protospacer
*  .. ****************** ** **

259. spacer 1.14|45328|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to KJ019104 (Synechococcus phage ACG-2014b isolate Syn7803US49, complete genome) position: , mismatch: 7, identity: 0.767

tattcatggaattatcgttatgtttctact	CRISPR spacer
ttactttggaattatcgttatgttgctcct	Protospacer
*  .. ****************** ** **

260. spacer 1.14|45328|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to KJ019042 (Synechococcus phage ACG-2014b isolate Syn7803C67, complete genome) position: , mismatch: 7, identity: 0.767

tattcatggaattatcgttatgtttctact	CRISPR spacer
ttactttggaattatcgttatgttgctcct	Protospacer
*  .. ****************** ** **

261. spacer 1.16|45460|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP045267 (Bacillus megaterium strain FDU301 plasmid pFDU301E, complete sequence) position: , mismatch: 7, identity: 0.767

acgacttcgttttcttcgatttctgaccat	CRISPR spacer
aagacttcgttttcattgatttctgggatt	Protospacer
* ************ *.********.   *

262. spacer 1.18|45592|30|NZ_ALQT01000015|CRT,CRISPRCasFinder matches to NZ_CP022992 (Paraburkholderia aromaticivorans strain BN5 plasmid pBN2, complete sequence) position: , mismatch: 7, identity: 0.767

catactgggctttcttgaccgcttccagat	CRISPR spacer
gacgcaaggcttccgtgaccgcttccagat	Protospacer
 *..* .*****.* ***************

263. spacer 1.18|45592|30|NZ_ALQT01000015|CRT,CRISPRCasFinder matches to NZ_CP022993 (Paraburkholderia aromaticivorans strain BN5 plasmid pBN3, complete sequence) position: , mismatch: 7, identity: 0.767

catactgggctttcttgaccgcttccagat	CRISPR spacer
gacgcaaggcttccgtgaccgcttccagat	Protospacer
 *..* .*****.* ***************

264. spacer 1.19|45658|30|NZ_ALQT01000015|CRT,CRISPRCasFinder matches to KY065473 (Streptococcus phage IPP32, complete genome) position: , mismatch: 7, identity: 0.767

aaatacactctataagttgaaaactcaaaa	CRISPR spacer
aaatacactctataagataaaaaattctac	Protospacer
**************** *.**** *.  *

265. spacer 1.20|45724|30|NZ_ALQT01000015|CRT,CRISPRCasFinder matches to MN693667 (Marine virus AFVG_250M836, complete genome) position: , mismatch: 7, identity: 0.767

gctgcgttaacccctctgccatctttccaa	CRISPR spacer
tatcatttaacccctatgccatctatccaa	Protospacer
  *   ********* ******** *****

266. spacer 1.20|45724|30|NZ_ALQT01000015|CRT,CRISPRCasFinder matches to MN694543 (Marine virus AFVG_250M1151, complete genome) position: , mismatch: 7, identity: 0.767

gctgcgttaacccctctgccatctttccaa	CRISPR spacer
tatcatttaacccctatgccatctatccaa	Protospacer
  *   ********* ******** *****

267. spacer 1.20|45724|30|NZ_ALQT01000015|CRT,CRISPRCasFinder matches to MN694516 (Marine virus AFVG_250M1152, complete genome) position: , mismatch: 7, identity: 0.767

gctgcgttaacccctctgccatctttccaa	CRISPR spacer
tatcatttaacccctatgccatctatccaa	Protospacer
  *   ********* ******** *****

268. spacer 1.24|45725|29|NZ_ALQT01000015|PILER-CR matches to MN693667 (Marine virus AFVG_250M836, complete genome) position: , mismatch: 7, identity: 0.759

gctgcgttaacccctctgccatctttcca	CRISPR spacer
tatcatttaacccctatgccatctatcca	Protospacer
  *   ********* ******** ****

269. spacer 1.24|45725|29|NZ_ALQT01000015|PILER-CR matches to MN694543 (Marine virus AFVG_250M1151, complete genome) position: , mismatch: 7, identity: 0.759

gctgcgttaacccctctgccatctttcca	CRISPR spacer
tatcatttaacccctatgccatctatcca	Protospacer
  *   ********* ******** ****

270. spacer 1.24|45725|29|NZ_ALQT01000015|PILER-CR matches to MN694516 (Marine virus AFVG_250M1152, complete genome) position: , mismatch: 7, identity: 0.759

gctgcgttaacccctctgccatctttcca	CRISPR spacer
tatcatttaacccctatgccatctatcca	Protospacer
  *   ********* ******** ****

271. spacer 1.2|44536|30|NZ_ALQT01000015|CRT,CRISPRCasFinder matches to NC_018878 (Bacillus thuringiensis Bt407 plasmid BTB_502p, complete sequence) position: , mismatch: 8, identity: 0.733

gatggagtgttagaagaattaaaaagaaga	CRISPR spacer
aatggagtgttagatgaatttaaactacag	Protospacer
.************* ***** ***  * ..

272. spacer 1.2|44536|30|NZ_ALQT01000015|CRT,CRISPRCasFinder matches to NC_048665 (Clostridium phage phiCDHM14, complete genome) position: , mismatch: 8, identity: 0.733

gatggagtgttagaagaattaaaaagaaga	CRISPR spacer
actaatatgttagaagaattgaaaagaaaa	Protospacer
. *.. .*************.*******.*

273. spacer 1.2|44536|30|NZ_ALQT01000015|CRT,CRISPRCasFinder matches to KU057941 (Clostridium phage CDSH1, complete genome) position: , mismatch: 8, identity: 0.733

gatggagtgttagaagaattaaaaagaaga	CRISPR spacer
actaatatgttagaagaattgaaaagaaaa	Protospacer
. *.. .*************.*******.*

274. spacer 1.2|44536|30|NZ_ALQT01000015|CRT,CRISPRCasFinder matches to MK473382 (Clostridium phage JD032, complete genome) position: , mismatch: 8, identity: 0.733

gatggagtgttagaagaattaaaaagaaga	CRISPR spacer
actaatatgttagaagaattgaaaagaaaa	Protospacer
. *.. .*************.*******.*

275. spacer 1.2|44536|30|NZ_ALQT01000015|CRT,CRISPRCasFinder matches to LN881738 (Escherichia phage slur17, complete genome) position: , mismatch: 8, identity: 0.733

gatggagtgttagaagaattaaaaagaaga	CRISPR spacer
actaatatgttagaagaattgaaaagaaaa	Protospacer
. *.. .*************.*******.*

276. spacer 1.2|44536|30|NZ_ALQT01000015|CRT,CRISPRCasFinder matches to NC_028905 (Clostridium phage phiCD111, complete genome) position: , mismatch: 8, identity: 0.733

gatggagtgttagaagaattaaaaagaaga	CRISPR spacer
actaatatgttagaagaattgaaaagaaaa	Protospacer
. *.. .*************.*******.*

277. spacer 1.2|44536|30|NZ_ALQT01000015|CRT,CRISPRCasFinder matches to HG796225 (Clostridium phage phiCDHM13 complete genome) position: , mismatch: 8, identity: 0.733

gatggagtgttagaagaattaaaaagaaga	CRISPR spacer
actaatatgttagaagaattgaaaagaaaa	Protospacer
. *.. .*************.*******.*

278. spacer 1.2|44536|30|NZ_ALQT01000015|CRT,CRISPRCasFinder matches to LN681538 (Clostridium phage phiCD481-1, complete genome) position: , mismatch: 8, identity: 0.733

gatggagtgttagaagaattaaaaagaaga	CRISPR spacer
actaatatgttagaagaattgaaaagaaaa	Protospacer
. *.. .*************.*******.*

279. spacer 1.2|44536|30|NZ_ALQT01000015|CRT,CRISPRCasFinder matches to HG798901 (Clostridium phage phiCDHM11 complete genome) position: , mismatch: 8, identity: 0.733

gatggagtgttagaagaattaaaaagaaga	CRISPR spacer
actaatatgttagaagaattgaaaagaaaa	Protospacer
. *.. .*************.*******.*

280. spacer 1.4|44668|30|NZ_ALQT01000015|CRT,CRISPRCasFinder matches to NZ_MF925335 (Edwardsiella tarda strain 150611-1 plasmid p150611 1B-1, complete sequence) position: , mismatch: 8, identity: 0.733

tcacttgtgaaatatcttcagaagatagaa	CRISPR spacer
cattttgtgaaatatcttcagatgaaagtc	Protospacer
.  .****************** ** **

281. spacer 1.4|44668|30|NZ_ALQT01000015|CRT,CRISPRCasFinder matches to NC_011668 (Shewanella baltica OS223 plasmid pS22302, complete sequence) position: , mismatch: 8, identity: 0.733

tcacttgtgaaatatcttcagaagatagaa	CRISPR spacer
tggcttgtgcaatatcttcagaagtcgaat	Protospacer
* .****** ************** ...*

282. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP013844 (Clostridium botulinum strain A634 plasmid pRSJ19_2, complete sequence) position: , mismatch: 8, identity: 0.733

tatttctatatttattatataatatattat	CRISPR spacer
atttcctatattaattatataatatttccc	Protospacer
  **.******* ************ *. .

283. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NC_018878 (Bacillus thuringiensis Bt407 plasmid BTB_502p, complete sequence) position: , mismatch: 8, identity: 0.733

tatttctatatttattatataatatattat	CRISPR spacer
tatttttttatttattatataataagaaca	Protospacer
*****.* **************** .

284. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NZ_AP019843 (Leptotrichia wadei strain JMUB3936 plasmid pJMUB3934p2, complete sequence) position: , mismatch: 8, identity: 0.733

tatttctatatttattatataatatattat	CRISPR spacer
ccgaactatatatattatttaatatattag	Protospacer
.    ****** ****** **********

285. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NC_047948 (Staphylococcus phage phiSA_BS2, complete genome) position: , mismatch: 8, identity: 0.733

tatttctatatttattatataatatattat	CRISPR spacer
accctctatatttattatttaatttattta	Protospacer
  ..************** **** ****

286. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to MK250023 (Prevotella phage Lak-B4, complete genome) position: , mismatch: 8, identity: 0.733

tatttctatatttattatataatatattat	CRISPR spacer
attttctatatttaatatataatcagaaat	Protospacer
  ************ ********  .  **

287. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to MH078572 (Staphylococcus phage phiSA_BS1, complete genome) position: , mismatch: 8, identity: 0.733

tatttctatatttattatataatatattat	CRISPR spacer
accctctatatttattatttaatttattta	Protospacer
  ..************** **** ****

288. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP013615 (Clostridium perfringens strain JP838 plasmid pJFP838A, complete sequence) position: , mismatch: 8, identity: 0.733

tatttctatatttattatataatatattat	CRISPR spacer
ttcctatatattttttatataatatatata	Protospacer
* ..* ******* *************

289. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP013615 (Clostridium perfringens strain JP838 plasmid pJFP838A, complete sequence) position: , mismatch: 8, identity: 0.733

tatttctatatttattatataatatattat	CRISPR spacer
ctcctatatattttttatatactatattaa	Protospacer
. ..* ******* ******* *******

290. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP022249 (Staphylococcus epidermidis strain ATCC 12228 plasmid pAMT1, complete sequence) position: , mismatch: 8, identity: 0.733

tatttctatatttattatataatatattat	CRISPR spacer
tatttatatatttattatatatgttggttc	Protospacer
***** ***************   *. * .

291. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP022249 (Staphylococcus epidermidis strain ATCC 12228 plasmid pAMT1, complete sequence) position: , mismatch: 8, identity: 0.733

tatttctatatttattatataatatattat	CRISPR spacer
tatttatatatttattatatatgttggttc	Protospacer
***** ***************   *. * .

292. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP016589 (Bacillus thuringiensis strain KNU-07 plasmid pBTKNU07-01, complete sequence) position: , mismatch: 8, identity: 0.733

tatttctatatttattatataatatattat	CRISPR spacer
agcctttatatttattattttatatattaa	Protospacer
 ...*.************ * ********

293. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to MN694637 (Marine virus AFVG_250M580, complete genome) position: , mismatch: 8, identity: 0.733

tatttctatatttattatataatatattat	CRISPR spacer
gcagttaatatatattatattatatattat	Protospacer
    *. **** ******** *********

294. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to MK250021 (Prevotella phage Lak-B2, complete genome) position: , mismatch: 8, identity: 0.733

tatttctatatttattatataatatattat	CRISPR spacer
attttctatatttaatatataatcagaaat	Protospacer
  ************ ********  .  **

295. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to MH622943 (Myoviridae sp. isolate ctbc_4, complete genome) position: , mismatch: 8, identity: 0.733

tatttct-----atatttattatataatatattat	CRISPR spacer
-----atgaaaaatatttattatatgatattttat	Protospacer
      *     *************.**** ****

296. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to MK504443 (Lactobacillus phage 521B, complete genome) position: , mismatch: 8, identity: 0.733

tatttctatatttattatataatatattat	CRISPR spacer
agataaaatatttgttatataatatgttat	Protospacer
 . *   ******.***********.****

297. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to MT119360 (Enterococcus phage nattely, complete genome) position: , mismatch: 8, identity: 0.733

tatttctatatttattatataatatattat	CRISPR spacer
tatttatatatttattatataccaaaaatg	Protospacer
***** *************** .* *

298. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to KC699836 (Bacillus phage SIOphi, partial genome) position: , mismatch: 8, identity: 0.733

tatttctatatttattatataatatattat	CRISPR spacer
acactctgtatttattatatagtatatatt	Protospacer
   .***.*************.*****  *

299. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NC_029073 (Geobacillus virus E3, complete genome) position: , mismatch: 8, identity: 0.733

tatttctatatttattatataatatattat	CRISPR spacer
tggcagtatatttaatatataatagattaa	Protospacer
*. .  ******** ********* ****

300. spacer 1.8|44932|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP017461 (Staphylococcus nepalensis strain JS1 plasmid pSNJS101, complete sequence) position: , mismatch: 8, identity: 0.733

acgtctaaaatattatcaaacatagggttg	CRISPR spacer
ggtactaaaatatcatcaaacataggtacg	Protospacer
.   *********.************  .*

301. spacer 1.8|44932|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP006989 (Rhizobium sp. IE4771 plasmid pRetIE4771c, complete sequence) position: , mismatch: 8, identity: 0.733

acgtctaaaatattatcaaacatagggttg	CRISPR spacer
ctgagtgaaatattatcgaacatagggtat	Protospacer
 .*  *.**********.**********

302. spacer 1.16|45460|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to MN693975 (Marine virus AFVG_250M1117, complete genome) position: , mismatch: 8, identity: 0.733

acgacttcgttttcttcgatttctgaccat	CRISPR spacer
tcatttattttttcttcgatttctaaccat	Protospacer
 *. .* . ***************.*****

303. spacer 1.19|45658|30|NZ_ALQT01000015|CRT,CRISPRCasFinder matches to NZ_CP021785 (Acinetobacter baumannii strain A85 plasmid pA85-1b, complete sequence) position: , mismatch: 8, identity: 0.733

aaatacactctataagttgaaaactcaaaa	CRISPR spacer
cttcattttctataagttgcaaactcaaaa	Protospacer
   .*. .*********** **********

304. spacer 1.23|45659|29|NZ_ALQT01000015|PILER-CR matches to NZ_CP021785 (Acinetobacter baumannii strain A85 plasmid pA85-1b, complete sequence) position: , mismatch: 8, identity: 0.724

aaatacactctataagttgaaaactcaaa	CRISPR spacer
cttcattttctataagttgcaaactcaaa	Protospacer
   .*. .*********** *********

305. spacer 1.2|44536|30|NZ_ALQT01000015|CRT,CRISPRCasFinder matches to NC_028838 (Clostridium phage phiCD506, complete genome) position: , mismatch: 9, identity: 0.7

gatggagtgttagaagaattaaaaagaaga	CRISPR spacer
actaatatgttagaagaattgaaaagaaag	Protospacer
. *.. .*************.*******..

306. spacer 1.2|44536|30|NZ_ALQT01000015|CRT,CRISPRCasFinder matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 9, identity: 0.7

gatggagtgttagaagaattaaaaagaaga	CRISPR spacer
actaatatgttagaagaattgaaaagaaag	Protospacer
. *.. .*************.*******..

307. spacer 1.2|44536|30|NZ_ALQT01000015|CRT,CRISPRCasFinder matches to NC_028958 (Clostridium phage phiCD146, complete genome) position: , mismatch: 9, identity: 0.7

gatggagtgttagaagaattaaaaagaaga	CRISPR spacer
actaatatgttagaagaattgaaaagaaag	Protospacer
. *.. .*************.*******..

308. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NC_015712 (Clostridium perfringens plasmid pCPPB-1, complete sequence) position: , mismatch: 9, identity: 0.7

tatttctatatttattatataatatattat	CRISPR spacer
acataaaatatttattatataataaatttg	Protospacer
   *   ***************** ***

309. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to JN638751 (Bacillus phage G, complete genome) position: , mismatch: 9, identity: 0.7

tatttctatatttattatataatatattat	CRISPR spacer
accttatatatttattatataataattccc	Protospacer
  .** ******************  *. .

310. spacer 1.11|45130|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP017263 (Lactobacillus paracasei strain FAM18149 plasmid pFAM18149.22, complete sequence) position: , mismatch: 9, identity: 0.7

tcaatttaattaaacaaccactcaatatga	CRISPR spacer
gtggcctaattaaacagccactaaatatgc	Protospacer
 .....**********.***** ******

311. spacer 1.14|45328|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to MN855815 (Bacteriophage sp. isolate 146, partial genome) position: , mismatch: 9, identity: 0.7

tattcatggaattatcgttatgtttctact	CRISPR spacer
agcaaatggaattattgtcatgtttctata	Protospacer
 ..  **********.**.*********.

312. spacer 1.16|45460|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP032695 (Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525c, complete sequence) position: , mismatch: 9, identity: 0.7

acgacttcgttttcttcgatttctgaccat	CRISPR spacer
acgaattcgttgtcttcgatttccagattg	Protospacer
**** ****** ***********... .

313. spacer 1.16|45460|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to MH319731 (Marine virus AG-345-E02 Ga0172268_11 genomic sequence) position: , mismatch: 9, identity: 0.7

acgacttcgttttcttcgatttctgaccat	CRISPR spacer
aatcgttcgttttcttcgatgtctgatgcg	Protospacer
*    *************** *****.

314. spacer 1.16|45460|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to GU071094 (Synechococcus phage S-SM1, complete genome) position: , mismatch: 9, identity: 0.7

acgacttcgttttcttcgatttctgaccat	CRISPR spacer
gtcattttgttttcttcgatttctgatttg	Protospacer
.. *.**.******************..

315. spacer 1.18|45592|30|NZ_ALQT01000015|CRT,CRISPRCasFinder matches to NZ_CP017750 (Cupriavidus sp. USMAA2-4 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

catactgggctttcttgaccgcttccagat	CRISPR spacer
ttgactgggctttcttgacggcatcctttg	Protospacer
.  **************** ** ***

316. spacer 1.2|44536|30|NZ_ALQT01000015|CRT,CRISPRCasFinder matches to NC_014633 (Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequence) position: , mismatch: 10, identity: 0.667

gatggagtgttagaagaattaaaaagaaga	CRISPR spacer
atgagagtcttagaagaattaaaaattctt	Protospacer
.  .**** ****************

317. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NC_013940 (Deferribacter desulfuricans SSM1 megaplasmid pDF308, complete sequence) position: , mismatch: 10, identity: 0.667

tatttctatatttattatataatatattat------	CRISPR spacer
------ataatatattatataatatattataagtaa	Protospacer
         ** ******************

318. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NZ_MK275626 (Clostridium perfringens strain JXJA17 plasmid p8, complete sequence) position: , mismatch: 10, identity: 0.667

tatttctatatttattatataatatattat------	CRISPR spacer
------tatatatattatataatatatatacaattt	Protospacer
      ***** ***************

319. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NZ_MK275626 (Clostridium perfringens strain JXJA17 plasmid p8, complete sequence) position: , mismatch: 10, identity: 0.667

tatttctatatttattatataatatattat	CRISPR spacer
atagagtatatatattatataatatatata	Protospacer
      ***** ***************

320. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP044539 (Borrelia sp. CA690 plasmid cp26, complete sequence) position: , mismatch: 10, identity: 0.667

tatttctatatttattatataatatattat------	CRISPR spacer
------ataatatattatataatatattatattaat	Protospacer
         ** ******************

321. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to LC557520 (Staphylococcus phage vB_SsapH-Golestan101-M DNA, complete genome) position: , mismatch: 10, identity: 0.667

----tat-ttctatatttattatataatatattat	CRISPR spacer
ataatatattttataataattatttaatct-----	Protospacer
    *** **.**** * ***** **** *

322. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NC_012226 (Brachyspira hyodysenteriae WA1 plasmid pBHWA1, complete sequence) position: , mismatch: 12, identity: 0.6

tatttctatatttattatataatatattat------	CRISPR spacer
------tattaatattatataatatatataaaaagt	Protospacer
      ***   ***************

323. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP016085 (Brachyspira hyodysenteriae ATCC 27164 strain B-78 plasmid pBhyoB78, complete sequence) position: , mismatch: 12, identity: 0.6

tatttctatatttattatataatatattat------	CRISPR spacer
------tattaatattatataatatatataaaaagt	Protospacer
      ***   ***************

324. spacer 1.5|44734|30|NZ_ALQT01000015|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP044537 (Borrelia sp. CA690 plasmid lp28-4, complete sequence) position: , mismatch: 18, identity: 0.4

tatttctatatttattatataatatattat------------------	CRISPR spacer
------------------ataatatattatatactaaatcgaaattaa	Protospacer
                  ************

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

7. NZ_ALQT01000012

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

8471 : 20536

Microbacterium_phage(14.29%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001042263.1\|8471_12197_+	phosphoribosylformylglycinamidine synthase	A6N228	Microbacterium_phage	1.6e-40	27.0
WP_000220672.1\|12430_13885_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	6.3e-54	32.5
WP_001291325.1\|13912_14935_+	phosphoribosylformylglycinamidine cyclo-ligase	A0A1D7SE90	Cyanophage	9.6e-65	44.6
WP_000685111.1\|15102_15654_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	1.8e-25	35.6
WP_000780020.1\|15673_16426_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_000166558.1\|16445_17993_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	E3SNU8	Prochlorococcus_phage	4.4e-45	52.9
WP_001045908.1\|18185_19085_+	peptidoglycan DD-metalloendopeptidase family protein	A0A221J6U0	Arthrobacter_phage	4.1e-19	45.9
WP_000783424.1\|19231_20536_+	LysM peptidoglycan-binding domain-containing protein	A0A0E3XB61	Gordonia_phage	4.6e-11	36.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

8. NZ_ALQT01000020

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

83920 : 94192

Streptococcus_phage(57.14%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000638895.1\|83920_85066_-	cysteine desulfurase	A0A1X6WFP1	Pacmanvirus	9.5e-29	28.4
WP_000033715.1\|85312_85765_+	hypothetical protein	NA	NA	NA	NA
WP_000043884.1\|85807_87157_-	glutathione-disulfide reductase	A0A2K5B2C5	Erysipelothrix_phage	1.3e-32	25.5
WP_000024629.1\|87331_87667_-	YlbF/YmcA family competence regulator	A0A1X9I5Y8	Streptococcus_phage	1.5e-19	39.4
WP_001269905.1\|87750_88917_-	chorismate synthase	A0A291AU41	Pandoravirus	2.1e-39	34.9
WP_001195725.1\|88917_89985_-	3-dehydroquinate synthase	NA	NA	NA	NA
WP_000707048.1\|90078_90756_-	type I 3-dehydroquinate dehydratase	W6LP76	Streptococcus_phage	5.3e-88	68.4
WP_001037599.1\|90755_91913_-	class I SAM-dependent rRNA methyltransferase	W6LLI2	Streptococcus_phage	6.0e-140	65.7
WP_000721254.1\|92047_94192_+	LTA synthase family protein	W6LM83	Streptococcus_phage	3.1e-259	67.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage