CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_ALRX01000019	Streptococcus agalactiae MRI Z1-012 ctg120005467178, whole genome shotgun sequence	0 crisprs	csa3	0	0	0	0
NZ_ALRX01000001	Streptococcus agalactiae MRI Z1-012 ctg120005466868, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALRX01000013	Streptococcus agalactiae MRI Z1-012 ctg120005467172, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALRX01000022	Streptococcus agalactiae MRI Z1-012 ctg120005467181, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALRX01000042	Streptococcus agalactiae MRI Z1-012 ctg120005467201, whole genome shotgun sequence	1 crisprs	NA	0	17	0	0
NZ_ALRX01000035	Streptococcus agalactiae MRI Z1-012 ctg120005467194, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALRX01000006	Streptococcus agalactiae MRI Z1-012 ctg120005467165, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALRX01000017	Streptococcus agalactiae MRI Z1-012 ctg120005467176, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALRX01000038	Streptococcus agalactiae MRI Z1-012 ctg120005467197, whole genome shotgun sequence	0 crisprs	NA	0	0	1	0
NZ_ALRX01000025	Streptococcus agalactiae MRI Z1-012 ctg120005467184, whole genome shotgun sequence	0 crisprs	NA	0	0	1	0
NZ_ALRX01000040	Streptococcus agalactiae MRI Z1-012 ctg120005467199, whole genome shotgun sequence	0 crisprs	csm6	0	0	0	0
NZ_ALRX01000011	Streptococcus agalactiae MRI Z1-012 ctg120005467170, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALRX01000023	Streptococcus agalactiae MRI Z1-012 ctg120005467182, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALRX01000055	Streptococcus agalactiae MRI Z1-012 ctg120005467214, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALRX01000003	Streptococcus agalactiae MRI Z1-012 ctg120005467162, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALRX01000027	Streptococcus agalactiae MRI Z1-012 ctg120005467186, whole genome shotgun sequence	0 crisprs	DEDDh	0	0	0	0
NZ_ALRX01000049	Streptococcus agalactiae MRI Z1-012 ctg120005467208, whole genome shotgun sequence	0 crisprs	DinG	0	0	1	0
NZ_ALRX01000044	Streptococcus agalactiae MRI Z1-012 ctg120005467203, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALRX01000045	Streptococcus agalactiae MRI Z1-012 ctg120005467204, whole genome shotgun sequence	1 crisprs	NA	0	0	0	0
NZ_ALRX01000030	Streptococcus agalactiae MRI Z1-012 ctg120005467189, whole genome shotgun sequence	0 crisprs	cas3	0	0	0	0
NZ_ALRX01000050	Streptococcus agalactiae MRI Z1-012 ctg120005467209, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALRX01000041	Streptococcus agalactiae MRI Z1-012 ctg120005467200, whole genome shotgun sequence	0 crisprs	cas3	0	0	1	0
NZ_ALRX01000046	Streptococcus agalactiae MRI Z1-012 ctg120005467205, whole genome shotgun sequence	0 crisprs	NA	0	0	1	0
NZ_ALRX01000009	Streptococcus agalactiae MRI Z1-012 ctg120005467168, whole genome shotgun sequence	1 crisprs	NA	0	1	0	0
NZ_ALRX01000010	Streptococcus agalactiae MRI Z1-012 ctg120005467169, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALRX01000036	Streptococcus agalactiae MRI Z1-012 ctg120005467195, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALRX01000026	Streptococcus agalactiae MRI Z1-012 ctg120005467185, whole genome shotgun sequence	0 crisprs	NA	0	0	1	0
NZ_ALRX01000037	Streptococcus agalactiae MRI Z1-012 ctg120005467196, whole genome shotgun sequence	0 crisprs	NA	0	0	0	1
NZ_ALRX01000034	Streptococcus agalactiae MRI Z1-012 ctg120005467193, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALRX01000018	Streptococcus agalactiae MRI Z1-012 ctg120005467177, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALRX01000052	Streptococcus agalactiae MRI Z1-012 ctg120005467211, whole genome shotgun sequence	0 crisprs	DEDDh	0	0	0	0
NZ_ALRX01000048	Streptococcus agalactiae MRI Z1-012 ctg120005467207, whole genome shotgun sequence	1 crisprs	csn2,cas2,cas1,cas9	0	10	0	0
NZ_ALRX01000039	Streptococcus agalactiae MRI Z1-012 ctg120005467198, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALRX01000012	Streptococcus agalactiae MRI Z1-012 ctg120005467171, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALRX01000005	Streptococcus agalactiae MRI Z1-012 ctg120005467164, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALRX01000053	Streptococcus agalactiae MRI Z1-012 ctg120005467212, whole genome shotgun sequence	1 crisprs	NA	1	4	1	0
NZ_ALRX01000029	Streptococcus agalactiae MRI Z1-012 ctg120005467188, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALRX01000020	Streptococcus agalactiae MRI Z1-012 ctg120005467179, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALRX01000031	Streptococcus agalactiae MRI Z1-012 ctg120005467190, whole genome shotgun sequence	0 crisprs	RT	0	0	0	0
NZ_ALRX01000051	Streptococcus agalactiae MRI Z1-012 ctg120005467210, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALRX01000004	Streptococcus agalactiae MRI Z1-012 ctg120005467163, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALRX01000043	Streptococcus agalactiae MRI Z1-012 ctg120005467202, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALRX01000007	Streptococcus agalactiae MRI Z1-012 ctg120005467166, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALRX01000047	Streptococcus agalactiae MRI Z1-012 ctg120005467206, whole genome shotgun sequence	0 crisprs	NA	0	0	3	0
NZ_ALRX01000016	Streptococcus agalactiae MRI Z1-012 ctg120005467175, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALRX01000028	Streptococcus agalactiae MRI Z1-012 ctg120005467187, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALRX01000054	Streptococcus agalactiae MRI Z1-012 ctg120005467213, whole genome shotgun sequence	1 crisprs	NA	0	0	0	0
NZ_ALRX01000033	Streptococcus agalactiae MRI Z1-012 ctg120005467192, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALRX01000024	Streptococcus agalactiae MRI Z1-012 ctg120005467183, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALRX01000002	Streptococcus agalactiae MRI Z1-012 ctg120005467161, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALRX01000021	Streptococcus agalactiae MRI Z1-012 ctg120005467180, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALRX01000015	Streptococcus agalactiae MRI Z1-012 ctg120005467174, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALRX01000014	Streptococcus agalactiae MRI Z1-012 ctg120005467173, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALRX01000008	Streptococcus agalactiae MRI Z1-012 ctg120005467167, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALRX01000032	Streptococcus agalactiae MRI Z1-012 ctg120005467191, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr_ID: NZ_ALRX01000037.1|WP_000384271.1|64271_64598_+|hypothetical-protein

Click the colored protein region to show detailed information

Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_ALRX01000037.1|WP_000384271.1|64271_64598_+|hypothetical-protein

64271_64598_+

108 aa aa

AcrIIA21

hit_Aca_id	identity	query_coverage	hit_coverage
anti_CRISPR3639\|WP_000384271.1\|AcrIIA21\|II-A\|Verified\|Streptococcus	1.0	1	1.0

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_ALRX01000054_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_ALRX01000054_1

23419-23509

Orphan

Consensus_repeat	Method
CTTTTTTTAGCATCAATTTTTGCTTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_ALRX01000054_1

>merge|NZ_ALRX01000054|1|23419-23509|CRISPRCasFinder
CTTTTTTTAGCATCAATTTTTGCTTTAGTTTGTGCATTTAACTGACTTACACGTTGAGACTCTGCTTTTTTTCAGCATCAATTTTTGCTTT

>NZ_ALRX01000054|1|1|23419-23509|CRISPRCasFinder
CTTTTTTTAGCATCAATTTTTGCTTT	AGTTTGTGCATTTAACTGACTTACACGTTGAGACTCTGC
TTTTTTTCAGCATCAATTTTTGCTTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_ALRX01000054.1\|WP_000176414.1\|15818_18179_-\|DUF87-domain-containing-protein	unknown	unknown	gnl\|CDD\|274279
NZ_ALRX01000054.1\|WP_000630817.1\|24849_25163_-\|LPXTG-cell-wall-anchor-domain-containing-protein	unknown	unknown	gnl\|CDD\|273478
NZ_ALRX01000054.1\|WP_001047516.1\|19031_19328_-\|hypothetical-protein	unknown	unknown	unknown
NZ_ALRX01000054.1\|WP_000651823.1\|19364_20117_-\|hypothetical-protein	unknown	unknown	unknown
NZ_ALRX01000054.1\|WP_000134093.1\|12157_14848_-\|CHAP-domain-containing-protein	unknown	unknown	gnl\|CDD\|380090
NZ_ALRX01000054.1\|WP_001879062.1\|24107_24830_-\|LPXTG-cell-wall-anchor-domain-containing-protein	unknown	unknown	gnl\|CDD\|237940
NZ_ALRX01000054.1\|WP_000004255.1\|20167_20749_-\|hypothetical-protein	unknown	unknown	unknown
NZ_ALRX01000054.1\|WP_000609827.1\|18580_19039_-\|hypothetical-protein	unknown	unknown	unknown
NZ_ALRX01000054.1\|WP_000461283.1\|15232_15826_-\|hypothetical-protein	unknown	unknown	unknown
NZ_ALRX01000054.1\|WP_001277171.1\|14882_15209_-\|hypothetical-protein	unknown	unknown	unknown
NZ_ALRX01000054.1\|WP_001037291.1\|18159_18519_-\|hypothetical-protein	unknown	unknown	unknown
NZ_ALRX01000054.1\|WP_000447009.1\|20853_21081_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_ALRX01000054.1\|WP_000176414.1\|15818_18179_-\|DUF87-domain-containing-protein	gnl\|CDD\|274279	TIGR02746, hypothetical_protein, type-IV secretion system protein TraC. The protein family described here is common among the F, P and I-like type IV secretion systems. Gene symbols include TraC (F-type), TrbE/VirB4 (P-type) and TraU (I-type). The protein conyains the Walker A and B motifs and so is a putative nucleotide triphosphatase.	2.36276e-17
NZ_ALRX01000054.1\|WP_000630817.1\|24849_25163_-\|LPXTG-cell-wall-anchor-domain-containing-protein	gnl\|CDD\|273478	TIGR01167, Zinc_metalloprotease_ZmpB, LPXTG-motif cell wall anchor domain. This model describes the LPXTG motif-containing region found at the C-terminus of many surface proteins of Streptococcus and Streptomyces species. Cleavage between the Thr and Gly by sortase or a related enzyme leads to covalent anchoring at the new C-terminal Thr to the cell wall. Hits that do not lie at the C-terminus or are not found in Gram-positive bacteria are probably false-positive. A common feature of this proteins containing this domain appears to be a high proportion of charged and zwitterionic residues immediatedly upstream of the LPXTG motif. This model differs from other descriptions of the LPXTG region by including a portion of that upstream charged region. [Cell envelope, Other].	1.63113e-05
NZ_ALRX01000054.1\|WP_000134093.1\|12157_14848_-\|CHAP-domain-containing-protein	gnl\|CDD\|380090	pfam18013, Phage_lysozyme2, Phage tail lysozyme. This domain has a lysozyme like fold. It is found in the tail protein of various phages probably giving them the ability to degrade the host cell wall peptidoglycan layer.	1.49095e-24
NZ_ALRX01000054.1\|WP_001879062.1\|24107_24830_-\|LPXTG-cell-wall-anchor-domain-containing-protein	gnl\|CDD\|237940	PRK15313, PRK15313, intestinal colonization autotransporter adhesin MisL.	5.99581e-06

>NZ_ALRX01000054.1|WP_000447009.1|20853_21081_-|hypothetical-protein
METAVRVVTAMGAILAIVGLGWVLTGAFDYFAGRKNGSPQMMDQGFTSMISGGALAVISAGVAAAIVAAMRAISF
>NZ_ALRX01000054.1|WP_000004255.1|20167_20749_-|hypothetical-protein
MSESFDYVAFARDFEKRHGRPPTAEELEKANVSVATVITSDNQKIDFRMVDSLDYVEGYKDKSSFGERLKTGLSFVIRNFFRVLLIVIQTPVYLTLFFFNLIKSTIGVFVIWFVSKFVLGWLVGIIAGLIYGFDLYKNPFPSPIKDIVDFSFGVNFFEDAVPNFFPHPVADAWIIGITIVFLALVMTFSKSET
>NZ_ALRX01000054.1|WP_000651823.1|19364_20117_-|hypothetical-protein
MKDILSELTKGLGSYNSSVNNSMTAINKSLMAIGYILVSILFLLELLSWYRFIRNQGGEMSWKLFLEVAVKYFIAYFLVSQSGAILNAILWFTNGVTKLIGVDLSGDNMFEFVWLKKGNLGVRILVNGLAAIAGVGAMISIKVMVLLRFIELYFYKAIAPVIVAFWMGDDTRHIAKNFLKTFGAIALQSAVIVLLLAIWQGLNIDAVIKISKDSWVGAFAAGFSYIGKCIVFLILLFGSQRKAKQLLQVS
>NZ_ALRX01000054.1|WP_001047516.1|19031_19328_-|hypothetical-protein
MNLEKLKQRRDELIRDNEWMDGLIKEKEEKLWELKVRSITASELARSAMQSAMRTAGIVDSFYGPSAQSSDNQANKAVEAVHNKSCFFMLERKSDRND
>NZ_ALRX01000054.1|WP_000609827.1|18580_19039_-|hypothetical-protein
MINQGQEYQYFKDKISHLEREVSRLSPYEYEHRLLKDVIADCLLQGQITVSELPQAIRLIQGDDLFYTYAWRFVEATGDCQAGITILKILQDDLNYFFAIGKLSQKQYSQWLEKWLSFLERGRIAFKGEKDFERYFQDQKEANRSLFSDFNL
>NZ_ALRX01000054.1|WP_001037291.1|18159_18519_-|hypothetical-protein
MNKLGSEFFKAIDQFERGIIGSFTWRQILMFFGIVLGVGLATVISLLQLPSILFYLSLALTVVPAFIYGIKKDEHLKEVITFRLKVQERAYQTEYESEENYGAFIPQKGVQEWNDPNES
>NZ_ALRX01000054.1|WP_000176414.1|15818_18179_-|DUF87-domain-containing-protein
MTLTKADKERAKQLQKALKASTQNTIQYTSLFEDGLMHIVDEAYSKTWQLGDTNYITGSEDEKLDIIEYYVDALNGLDSENTYQLTILNRPVPTTLLDQITYDLEGDERDVFRKEYNNIIRSRFAKDQNNFKVEKFVTVSTRAKDRKQAYRKLNDVDTHFTTQFQLVDVLLKSLDGTERLNIFADLLRGNPYLDVDYKDVRISGLSTKSFIAPGRLWFQPDQFRMDKKYCKILFARTFPAFLNDRLIKSLTDIGIELSISIHAKPYDVAEAVKKVNTAEAGVKMDMVKSQVAAAQKGISGNLAVSSVAQDTADEAEKWKTEINDNDQKMFSGVFLVMVKADSAEELADYTSRIKQAGRKHMIEFEEIYYHQEEALNTMLPIGKTYIDVKRRFMRDMTTTNIATQIPFTNTDLQSQSPLANYYGQNQISNNIISLDRQRDLYTSSGVILGSSGSGKSVFVKINEVIPAILRFPNDRVIIVDPEEEYVDIGRAFGAQVIDIYPGTKTHFNLMDIPDLDKLRDEDKDFVGQKASLIMGLFENILQEVTDDDVSLIDRVTRLCYEQITDRTPTLKDWHDILLEQPEEEAQSLALKSESYTKGSQDIFAYETNVDLNNQVVIFNLKKLSGKLKPFAMMVIQDYIWQHVVDHKDEFVTRVYFDEMQNQFETDDQAAFFSKMYARIRKYGSIPTGITQNVETLLSRKEGRNLLYNSEFLVLLKQKKTTIPYLLQTINLTDALVRYIEKPKAIGTGLIIAGTTTVPFENPIPEDTELFRLVATDAYRKMEEENV
>NZ_ALRX01000054.1|WP_000461283.1|15232_15826_-|hypothetical-protein
MFEDVTLQLPKNEEKKLMAHYYQLHQEAIEEALAGKELWKPYIRMSGLSQWLDVSTTTIVKWQREGMPHIVIDGVTLYDKRKIATWLNHFERNKIISQEKQMKIFPGYLSIKHVFGTIITYSKKVVLDLIQDLRDEDIQDFSYWSPLYFLETDELGQPVYLTYLVNEVGIPLYPDCYYYITLTKEQESKLESLELSI
>NZ_ALRX01000054.1|WP_001277171.1|14882_15209_-|hypothetical-protein
MSAVPIAAAYLVRKRQEEKKVRQKSEKELKKIKVMVTGEEPVYYGHALKSKMKTEKYSRSPVIGEYALKLSKKHPGKVTWIDIAVLLGLILAGLATIWSVYAVIHDTF
>NZ_ALRX01000054.1|WP_000134093.1|12157_14848_-|CHAP-domain-containing-protein
MTEEKQDLRSRVVRKRQIKASVHRHNQSSARKAQKAAKGEFQIATKELKEAREAYQKAQTDFRAGIIDDEALQKAKNRLKQAQNKYKDAKKVKKKVRKTNLTLSQKARQTGRRITKRTGQEILEMGLEQDDTLSDLVRTKHQIRQTRVMAKQAGRATGKSVKLTYRGAKGTVKLGAKGTKYAYRQTRKGSVKATQASLRAASKTAQTLVATSKALVSAITPIIANPITWVVAGVISLLLLIVILVSSVFSSNVVQQNEFTLNQSWLHISQMDRKKSSDKVDYYTDIDSILLYMNYRYGGEWEPDAKWDDGFGGKVTGALGFNHFSDALDDIWKEENSDITNLKTMAELYTNGKKWIKFSKDDLEEYKEILDSQVETGKYLAYQELSNPFYSSNDDKADSEYLTVTKRYGYTDKDTIDPTTTLQAKASQKLYAVMDGKVTVTKKDLKGEKTKTTNLIIEGKEARFIYYDISNSRVRTGDRVETGQELATVSGSTQKIAYAKRYGEVDDKDATWLKKIRDREVSYGYTIQTKMNKKEVWVLTNPGFYFPFVKYAETTIVTQTPSEMSGRAKQFYDLVKKYLPQATDNGIAAIVGCFGVESGINPKRAEGDYLSPPVGASDSSWDDESWLTLGGPAIYGGGYPNILHRGLGLGQWTDTSDGANRNTLLREFAKKEGQKWYSLELQVKFMLEGDNPYYINTFKRVATNNGDVDSLTAEFLAKWEGVPGNKLAQRQAIAKQALMWFKQPTHSGGASTLQSSWNFPKEYASKLKSYPSAATVSRSLNGNTYPIGQCTWYVYNRLSEAGAPAINWLGNGQDWVRNLVAKGWTFSNKPVAGAVCSTAGGFDYTMPTYGHVSYVEHVNEDGTFLVSECNVMGIQNQIHWAVKLNQSYYTFAIPPK
>NZ_ALRX01000054.1|WP_001879062.1|24107_24830_-|LPXTG-cell-wall-anchor-domain-containing-protein
MSKKQLLLLTCVSTIALAGTTAFAEDVVPVDPAVPSTEVVTPPNPVDPSLPTDTTDPSTPVAPEKLPDTPKPAEPERPKEELPAPVDPTTPSAGKEDKPETVPGQAETPKEEVKPENPKSSEDKKKEELVPDNVSKDIIEKVDTTTGEVVFKPIPVTPDKTVIGTKDSQVIIRDQAGRTQVVTPESLGGHVNPNGTVTLKDATGAEKTLPKTGDKQSVLGYLGMMLISVLGYAVKKKVSH
>NZ_ALRX01000054.1|WP_000630817.1|24849_25163_-|LPXTG-cell-wall-anchor-domain-containing-protein
LAESYNHIIAGGGEAIPVVDETGKITGYVDGSQKAVANEVTLALTSNSQAPLESPVNKENQNVTKSSQALPHTGEASLSLLSIVGAGIISTLGLVSLKKRRTH

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_ALRX01000042_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_ALRX01000042_1

1-888

Orphan

II-A

Consensus_repeat	Method
GAGCTGTGCTGTTTCGAATGGTTCCAAAAC	CRT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	PILER-CR
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	CRISPRCasFinder
TAGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACT	PILER-CR

13 spacers

The CRISPR arrays of NZ_ALRX01000042_1

>merge|NZ_ALRX01000042|1|1-888|CRT,PILER-CR,CRISPRCasFinder,PILER-CR
GAGCTGTGCTGTTTCGAATGGTTCCAAAACCCCAACCGTCCACACTATACCCTAAAAGTAGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACAAACTAAAGATATTGACTCCCTGCAGGATAGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACTCTTAATTTAGAACCTTTTTTACTTCCTTTGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACTAGTAGCCATTATTATTATGGCTTTTATTTGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACGGATGATTTCGATTATGCGGCGGTGGTTGAGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACAAATGTTAATTTCATATCTACATCTTGTATGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACTGGCGAAAAATGGTATTATCTCAAAGGCAAGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACTCCTCTTTCTATGTTTCAATTGCCAATTTTGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACAAAAAATCTTGAATCATCATATAAAATCTTGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACAGCTATCTTTTTCGTACTTTGAAATAGTTTGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACTGGAAAAAGGGCAAAGTATTCTTGATTATAGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACTACTTGACGAATTGAAGATGACGGAATTTAGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACAAGCTAATTCTCATCTCACCGAGATGGATAGTTTTAGAGCTGTGCTGTTATTATGCTAGGACATCA

>NZ_ALRX01000042|1|1|1-888|CRT
GAGCTGTGCTGTTTCGAATGGTTCCAAAAC	CCCAACCGTCCACACTATACCCTAAAAGTAGTTTTA
GAGCTGTGCTGTTTCGAATGGTTCCAAAAC	AAACTAAAGATATTGACTCCCTGCAGGATAGTTTTA
GAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TCTTAATTTAGAACCTTTTTTACTTCCTTTGTTTTA
GAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TAGTAGCCATTATTATTATGGCTTTTATTTGTTTTA
GAGCTGTGCTGTTTCGAATGGTTCCAAAAC	GGATGATTTCGATTATGCGGCGGTGGTTGAGTTTTA
GAGCTGTGCTGTTTCGAATGGTTCCAAAAC	AAATGTTAATTTCATATCTACATCTTGTATGTTTTA
GAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TGGCGAAAAATGGTATTATCTCAAAGGCAAGTTTTA
GAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TCCTCTTTCTATGTTTCAATTGCCAATTTTGTTTTA
GAGCTGTGCTGTTTCGAATGGTTCCAAAAC	AAAAAATCTTGAATCATCATATAAAATCTTGTTTTA
GAGCTGTGCTGTTTCGAATGGTTCCAAAAC	AGCTATCTTTTTCGTACTTTGAAATAGTTTGTTTTA
GAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TGGAAAAAGGGCAAAGTATTCTTGATTATAGTTTTA
GAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TACTTGACGAATTGAAGATGACGGAATTTAGTTTTA
GAGCTGTGCTGTTTCGAATGGTTCCAAAAC	AAGCTAATTCTCATCTCACCGAGATGGATAGTTTTA
GAGCTGTGCTGTTATTATGCTAGGACATCA

>NZ_ALRX01000042|1|1|61-558|PILER-CR
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	AAACTAAAGATATTGACTCCCTGCAGGATA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TCTTAATTTAGAACCTTTTTTACTTCCTTT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TAGTAGCCATTATTATTATGGCTTTTATTT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	GGATGATTTCGATTATGCGGCGGTGGTTGA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	AAATGTTAATTTCATATCTACATCTTGTAT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TGGCGAAAAATGGTATTATCTCAAAGGCAA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TCCTCTTTCTATGTTTCAATTGCCAATTTT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACAAAAAATCTTGAATCATCATATAAAATCTTGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACAGCTATCTTTTTCGTACTTTGAAATAGTTTGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACTGG	AAAAAGGGCAAAGTATTCTTGATTATA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACTAC	TTGACGAATTGAAGATGACGGAATTTA


>NZ_ALRX01000042|1|1|61-822|CRISPRCasFinder
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	AAACTAAAGATATTGACTCCCTGCAGGATA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TCTTAATTTAGAACCTTTTTTACTTCCTTT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TAGTAGCCATTATTATTATGGCTTTTATTT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	GGATGATTTCGATTATGCGGCGGTGGTTGA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	AAATGTTAATTTCATATCTACATCTTGTAT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TGGCGAAAAATGGTATTATCTCAAAGGCAA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TCCTCTTTCTATGTTTCAATTGCCAATTTT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	AAAAAATCTTGAATCATCATATAAAATCTT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	AGCTATCTTTTTCGTACTTTGAAATAGTTT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TGGAAAAAGGGCAAAGTATTCTTGATTATA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TACTTGACGAATTGAAGATGACGGAATTTA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC

>NZ_ALRX01000042|1|2|655-823|PILER-CR
	AAACTAAAGATATTGACTCCCTGCAGGATA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TCTTAATTTAGAACCTTTTTTACTTCCTTT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TAGTAGCCATTATTATTATGGCTTTTATTT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	GGATGATTTCGATTATGCGGCGGTGGTTGA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	AAATGTTAATTTCATATCTACATCTTGTAT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TGGCGAAAAATGGTATTATCTCAAAGGCAA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TCCTCTTTCTATGTTTCAATTGCCAATTTT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACAAAAAATCTTGAATCATCATATAAAATCTTGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACAGCTATCTTTTTCGTACTTTGAAATAGTTTGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACTGG	AAAAAGGGCAAAGTATTCTTGATTATA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACTAC	TTGACGAATTGAAGATGACGGAATTTA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_ALRX01000042.1\|WP_000180007.1\|6809_7469_+\|HD-domain-containing-protein	unknown	unknown	gnl\|CDD\|224336
NZ_ALRX01000042.1\|WP_000665410.1\|7941_8376_+\|peptide-methionine-(R)-S-oxide-reductase-MsrB	unknown	unknown	gnl\|CDD\|234692
NZ_ALRX01000042.1\|WP_041970307.1\|12543_13125_-\|CatB-related-O-acetyltransferase	unknown	unknown	gnl\|CDD\|100040
NZ_ALRX01000042.1\|WP_011058334.1\|1142_1313_+\|hypothetical-protein	unknown	unknown	unknown
NZ_ALRX01000042.1\|WP_000438314.1\|1445_1862_+\|nucleoside-diphosphate-kinase	unknown	unknown	gnl\|CDD\|179085
NZ_ALRX01000042.1\|WP_001056394.1\|13892_14504_+\|TVP38/TMEM64-family-protein	unknown	unknown	gnl\|CDD\|223475
NZ_ALRX01000042.1\|WP_000621142.1\|7477_7942_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_ALRX01000042.1\|WP_000467138.1\|14540_15323_-\|hypothetical-protein	unknown	unknown	unknown
NZ_ALRX01000042.1\|WP_000065321.1\|11319_12423_+\|DUF2974-domain-containing-protein	unknown	unknown	gnl\|CDD\|371412
NZ_ALRX01000042.1\|WP_001019133.1\|1997_3830_+\|elongation-factor-4	unknown	unknown	gnl\|CDD\|235462

Protein	Function_ID	Function_description	E-value
NZ_ALRX01000042.1\|WP_000180007.1\|6809_7469_+\|HD-domain-containing-protein	gnl\|CDD\|224336	COG1418, COG1418, Predicted HD superfamily hydrolase [General function prediction only].	2.66997e-33
NZ_ALRX01000042.1\|WP_000665410.1\|7941_8376_+\|peptide-methionine-(R)-S-oxide-reductase-MsrB	gnl\|CDD\|234692	PRK00222, PRK00222, peptide-methionine (R)-S-oxide reductase MsrB.	6.40832e-86
NZ_ALRX01000042.1\|WP_041970307.1\|12543_13125_-\|CatB-related-O-acetyltransferase	gnl\|CDD\|100040	cd03349, LbH_XAT, Xenobiotic acyltransferase (XAT): The XAT class of hexapeptide acyltransferases is composed of a large number of microbial enzymes that catalyze the CoA-dependent acetylation of a variety of hydroxyl-bearing acceptors such as chloramphenicol and streptogramin, among others. Members of this class of enzymes include Enterococcus faecium streptogramin A acetyltransferase and Pseudomonas aeruginosa chloramphenicol acetyltransferase. They contain repeated copies of a six-residue hexapeptide repeat sequence motif (X-[STAV]-X-[LIV]-[GAED]-X) and adopt a left-handed parallel beta helix (LbH) structure. The active enzyme is a trimer with CoA and substrate binding sites at the interface of two separate LbH subunits. XATs are implicated in inactivating xenobiotics leading to xenobiotic resistance in patients.	1.12772e-70
NZ_ALRX01000042.1\|WP_000438314.1\|1445_1862_+\|nucleoside-diphosphate-kinase	gnl\|CDD\|179085	PRK00668, ndk, mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-; Validated.	4.64422e-78
NZ_ALRX01000042.1\|WP_001056394.1\|13892_14504_+\|TVP38/TMEM64-family-protein	gnl\|CDD\|223475	COG0398, COG0398, Uncharacterized conserved protein [Function unknown].	6.1265e-31
NZ_ALRX01000042.1\|WP_000621142.1\|7477_7942_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	5.91796e-19
NZ_ALRX01000042.1\|WP_000065321.1\|11319_12423_+\|DUF2974-domain-containing-protein	gnl\|CDD\|371412	pfam11187, DUF2974, Protein of unknown function (DUF2974). This bacterial family of proteins has no known function.	1.82724e-105
NZ_ALRX01000042.1\|WP_001019133.1\|1997_3830_+\|elongation-factor-4	gnl\|CDD\|235462	PRK05433, PRK05433, GTP-binding protein LepA; Provisional.	0

>NZ_ALRX01000042.1|WP_011058334.1|1142_1313_+|hypothetical-protein
MKGYNSNLMVKGLGCSTLYLIISLTALVLLVIAGVFFVINTCKLTRKAVENLSIIN
>NZ_ALRX01000042.1|WP_000438314.1|1445_1862_+|nucleoside-diphosphate-kinase
MEQTFFMIKPDGVKRGFIGEVISRIERRGFSIDRLEVRYADADILKRHYAELTDRPFFPTLVDYMTSGPVIIGVISGEEVISTWRTMMGSTNPKDALPGTIRGDFAQAPSPNQATCNIVHGSDSPESATREIAIWFNN
>NZ_ALRX01000042.1|WP_001019133.1|1997_3830_+|elongation-factor-4
MNIEDLKKRQEKIRNFSIIAHIDHGKSTLADRILEKTETVSSREMQAQLLDSMDLERERGITIKLNAIELNYTAKDGETYIFHLIDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQTLANVYLALDNDLEILPVINKIDLPAADPERVRAEVEDVIGLDASEAVLASAKAGIGIEEILEQIVEKVPAPTGEVDAPLQALIFDSVYDAYRGVILQVRIVNGMVKPGDKIQMMSNGKTFDVTEVGIFTPKAVGRDFLATGDVGYIAASIKTVADTRVGDTITLANNPAIEPLHGYKQMNPMVFAGLYPIESNKYNDLREALEKLQLNDASLQFEPETSQALGFGFRCGFLGLLHMDVIQERLEREFNIDLIMTAPSVVYHVNTTDGEMLEVSNPSEFPDPTRVDSIEEPYVKAQIMVPQEFVGAVMELAQRKRGDFVTMDYIDDNRVNVIYQIPLAEIVFDFFDKLKSSTRGYASFDYEISEYRRSQLVKMDILLNGDKVDALSFIVHKEFAYERGKLIVDKLKKIIPRQQFEVPIQAAIGQKIVARSDIKALRKNVLAKCYGGDVSRKRKLLEKQKAGKKRMKAIGSVEVPQEAFLSVLSMDDDDKK
>NZ_ALRX01000042.1|WP_000180007.1|6809_7469_+|HD-domain-containing-protein
MTMVKREDVILNATENMVHHKLKNDPSGHDWFHIVRVRNLAVELAHKEGANTFICQMAALLHDIIDDKICQDSKQASYELTQWLYSQDLAIAEVEHILDILENISFKAGTGLTMKTLEGQIVQDADRLDAMGAIGIARTMAYSGSKGRLIHDPNLKPRENLTLEEYRNGQDTAIMHFYEKLLKLKDLMNTKQGKMLAQKRHDFLELYLAEFYAEWNGKR
>NZ_ALRX01000042.1|WP_000621142.1|7477_7942_+|GNAT-family-N-acetyltransferase
MIRRAKEKDLPDIAELLKQILMLHHEVRPDIFHTRGSKFSKEQLKEMLIDESKPIFVYESDEGKVVAHLFLQLQEKRDLPRKSFKTLYIDDLCIDEEVRGQQIGQKLMDFARQYAKKHGCYNITLNVWNDNQRAVSFYEKLGFKPQQTQMEEIL
>NZ_ALRX01000042.1|WP_000665410.1|7941_8376_+|peptide-methionine-(R)-S-oxide-reductase-MsrB
MKETQEELRQRIGHTAYQVTQNSATEHAFTGKYDDFFEEGIYVDIVSGEVLFSSLDKFQSGCGWPAFSKPIENRMVTNHQDHSHGMHRIEVRSRQADSHLGHVFNDGPVDAGGLRYCINSAALDFIPYDQMAKRGYGDYLSLFD
>NZ_ALRX01000042.1|WP_000065321.1|11319_12423_+|DUF2974-domain-containing-protein
MSNIITYLKNNSNLTFDELALNDVDILCLNEFGYISFEKLINTTEMKSVLVCELYHEYLQTMAKSYSFMFTSQRHDLCQLMMTSKRFKNLTLSYYRAEISLEFEKQFAAMVFTIPNINYHQVVFRGTDANLIGWKEDFKLTYMREISAHRSAIKYLNTILPYFDKVVLSGHSKGGNLALYAAMFTKPDLKAKIDLIWLIDSPGLQKTLLPTTEYKTTKQKCIRLLPEESIVGMMLYSDIEPLIISSNARGILQHDVTTWEIQEPAILKTGTGLSLKSICFEKTFQQWMAELKSQERKLFFDLLFDSFLSSGVSSLDDFNLASRAKMMKAFHSFRELDDDKKRLFNKSLKLLVTIFWGAYHDNSRETK
>NZ_ALRX01000042.1|WP_041970307.1|12543_13125_-|CatB-related-O-acetyltransferase
MRTDMSTGASYPKYGFSVGKYTYGYQQFFYEGVNLKEIGAFCSIAQNVTITGLNHPTDHITTNPFIYYKSRGFINEDRADLIDEKKNGKVIIGNDVWIGTNVTILPSVTIGNGAIIGAGSVITKDIPDYAVVAGTPAKIIKYRFSEEEITLLNASQWWNWSDEAIKEHISEFSDKKEFFNTLKSISENKNHKL
>NZ_ALRX01000042.1|WP_001056394.1|13892_14504_+|TVP38/TMEM64-family-protein
MNMKLSKRYRFWQKVIKALGVLALIATLVLVVYLYKLGILNDSNELKDLVHKYEFWGPMIFIVAQIVQIVFPVIPGGVTTVAGFLIFGPTLGFIYNYIGIIIGSVILFWLVKFYGRKFVLLFMDQKTFDKYESKLETSGYEKFFIFCMASPISPADIMVMITGLSNMSIKRFVTIIMITKPISIIGYSYLWIYGGDILKNFLN
>NZ_ALRX01000042.1|WP_000467138.1|14540_15323_-|hypothetical-protein
MFGKLLKYELKSVGKWYLTLNAAVLLVSIILGLVLKALGGNFSTDTNSTSAQIFTIILVLLLAMVISGSLLSTLAIIIKRFYSNIFGRQGYLTLTLPVTTNQIICSKLLASLLWSIFNIFIVIIGIILVILPLVGIGQFVVAFPEIYKIISSSNAPLFIAYFFLSYVAGTLLIYLSIAVGQLFTNKRVLMGIVSYFGISLLITFLTLIIDSIFHIDLFNSHANATFSQPVLLYNILVSIVEIAIFYMLTHSIIKYKLNIQ

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_ALRX01000042_1	1.14\|97\|30\|NZ_ALRX01000042\|PILER-CR,CRISPRCasFinder	97-126	30	MK448971	Streptococcus phage Javan52, complete genome	32571-32600	0	1.0
NZ_ALRX01000042_1	1.14\|97\|30\|NZ_ALRX01000042\|PILER-CR,CRISPRCasFinder	97-126	30	MK448956	Streptococcus phage Javan48, complete genome	30890-30919	0	1.0
NZ_ALRX01000042_1	1.20\|493\|30\|NZ_ALRX01000042\|PILER-CR,CRISPRCasFinder	493-522	30	MK448837	Streptococcus phage Javan10, complete genome	6972-7001	0	1.0
NZ_ALRX01000042_1	1.21\|559\|30\|NZ_ALRX01000042\|CRISPRCasFinder	559-588	30	MK448736	Streptococcus phage Javan35, complete genome	12531-12560	0	1.0
NZ_ALRX01000042_1	1.21\|559\|30\|NZ_ALRX01000042\|CRISPRCasFinder	559-588	30	MK448781	Streptococcus phage Javan5, complete genome	14553-14582	0	1.0
NZ_ALRX01000042_1	1.21\|559\|30\|NZ_ALRX01000042\|CRISPRCasFinder	559-588	30	MK448938	Streptococcus phage Javan44, complete genome	12532-12561	0	1.0
NZ_ALRX01000042_1	1.21\|559\|30\|NZ_ALRX01000042\|CRISPRCasFinder	559-588	30	MK448911	Streptococcus phage Javan34, complete genome	12531-12560	0	1.0
NZ_ALRX01000042_1	1.21\|559\|30\|NZ_ALRX01000042\|CRISPRCasFinder	559-588	30	MK448916	Streptococcus phage Javan36, complete genome	12531-12560	0	1.0
NZ_ALRX01000042_1	1.22\|625\|30\|NZ_ALRX01000042\|CRISPRCasFinder	625-654	30	MK448507	Streptococcus satellite phage Javan463, complete genome	4750-4779	0	1.0
NZ_ALRX01000042_1	1.22\|625\|30\|NZ_ALRX01000042\|CRISPRCasFinder	625-654	30	MK448510	Streptococcus satellite phage Javan469, complete genome	3359-3388	0	1.0
NZ_ALRX01000042_1	1.22\|625\|30\|NZ_ALRX01000042\|CRISPRCasFinder	625-654	30	MK448521	Streptococcus satellite phage Javan518, complete genome	3412-3441	0	1.0
NZ_ALRX01000042_1	1.22\|625\|30\|NZ_ALRX01000042\|CRISPRCasFinder	625-654	30	MK448501	Streptococcus satellite phage Javan449, complete genome	3421-3450	0	1.0
NZ_ALRX01000042_1	1.22\|625\|30\|NZ_ALRX01000042\|CRISPRCasFinder	625-654	30	MK448343	Streptococcus satellite phage Javan162, complete genome	4750-4779	0	1.0
NZ_ALRX01000042_1	1.22\|625\|30\|NZ_ALRX01000042\|CRISPRCasFinder	625-654	30	MK448329	Streptococcus satellite phage Javan134, complete genome	4750-4779	0	1.0
NZ_ALRX01000042_1	1.22\|625\|30\|NZ_ALRX01000042\|CRISPRCasFinder	625-654	30	MK448325	Streptococcus satellite phage Javan125, complete genome	4750-4779	0	1.0
NZ_ALRX01000042_1	1.22\|625\|30\|NZ_ALRX01000042\|CRISPRCasFinder	625-654	30	MK448504	Streptococcus satellite phage Javan455, complete genome	3472-3501	0	1.0
NZ_ALRX01000042_1	1.22\|625\|30\|NZ_ALRX01000042\|CRISPRCasFinder	625-654	30	MK448516	Streptococcus satellite phage Javan490, complete genome	3411-3440	0	1.0
NZ_ALRX01000042_1	1.22\|625\|30\|NZ_ALRX01000042\|CRISPRCasFinder	625-654	30	MK448335	Streptococcus satellite phage Javan148, complete genome	4750-4779	0	1.0
NZ_ALRX01000042_1	1.23\|691\|30\|NZ_ALRX01000042\|CRISPRCasFinder	691-720	30	MK448350	Streptococcus satellite phage Javan19, complete genome	1600-1629	0	1.0
NZ_ALRX01000042_1	1.25\|694\|27\|NZ_ALRX01000042\|PILER-CR	694-720	27	MK448350	Streptococcus satellite phage Javan19, complete genome	1602-1628	0	1.0
NZ_ALRX01000042_1	1.21\|559\|30\|NZ_ALRX01000042\|CRISPRCasFinder	559-588	30	MK448729	Streptococcus phage Javan31, complete genome	15067-15096	1	0.967
NZ_ALRX01000042_1	1.21\|559\|30\|NZ_ALRX01000042\|CRISPRCasFinder	559-588	30	MK448691	Streptococcus phage Javan17, complete genome	15067-15096	1	0.967
NZ_ALRX01000042_1	1.21\|559\|30\|NZ_ALRX01000042\|CRISPRCasFinder	559-588	30	MK448948	Streptococcus phage Javan46, complete genome	15011-15040	1	0.967
NZ_ALRX01000042_1	1.20\|493\|30\|NZ_ALRX01000042\|PILER-CR,CRISPRCasFinder	493-522	30	MK448971	Streptococcus phage Javan52, complete genome	11833-11862	2	0.933
NZ_ALRX01000042_1	1.20\|493\|30\|NZ_ALRX01000042\|PILER-CR,CRISPRCasFinder	493-522	30	MH853356	Streptococcus phage LF2, partial genome	8570-8599	2	0.933
NZ_ALRX01000042_1	1.21\|559\|30\|NZ_ALRX01000042\|CRISPRCasFinder	559-588	30	MK448673	Streptococcus phage Javan119, complete genome	13656-13685	2	0.933
NZ_ALRX01000042_1	1.22\|625\|30\|NZ_ALRX01000042\|CRISPRCasFinder	625-654	30	MK448395	Streptococcus satellite phage Javan279, complete genome	3305-3334	2	0.933
NZ_ALRX01000042_1	1.23\|691\|30\|NZ_ALRX01000042\|CRISPRCasFinder	691-720	30	NZ_AP018727	Streptococcus dysgalactiae strain Kdys0611 plasmid pFGCSD1, complete sequence	21389-21418	2	0.933
NZ_ALRX01000042_1	1.23\|691\|30\|NZ_ALRX01000042\|CRISPRCasFinder	691-720	30	NZ_AP018728	Streptococcus dysgalactiae strain Kdys0611 plasmid pFGCSD2, complete sequence	10365-10394	2	0.933
NZ_ALRX01000042_1	1.23\|691\|30\|NZ_ALRX01000042\|CRISPRCasFinder	691-720	30	NZ_AP018730	Streptococcus dysgalactiae strain Kdys0611 plasmid pFGCSD4, complete sequence	8833-8862	2	0.933
NZ_ALRX01000042_1	1.23\|691\|30\|NZ_ALRX01000042\|CRISPRCasFinder	691-720	30	NZ_AP018731	Streptococcus dysgalactiae strain Kdys0611 plasmid pFGCSD5, complete sequence	136-165	2	0.933
NZ_ALRX01000042_1	1.23\|691\|30\|NZ_ALRX01000042\|CRISPRCasFinder	691-720	30	MK448662	Streptococcus satellite phage Javan97, complete genome	1667-1696	2	0.933
NZ_ALRX01000042_1	1.25\|694\|27\|NZ_ALRX01000042\|PILER-CR	694-720	27	NZ_AP018727	Streptococcus dysgalactiae strain Kdys0611 plasmid pFGCSD1, complete sequence	21390-21416	2	0.926
NZ_ALRX01000042_1	1.25\|694\|27\|NZ_ALRX01000042\|PILER-CR	694-720	27	NZ_AP018728	Streptococcus dysgalactiae strain Kdys0611 plasmid pFGCSD2, complete sequence	10366-10392	2	0.926
NZ_ALRX01000042_1	1.25\|694\|27\|NZ_ALRX01000042\|PILER-CR	694-720	27	NZ_AP018730	Streptococcus dysgalactiae strain Kdys0611 plasmid pFGCSD4, complete sequence	8834-8860	2	0.926
NZ_ALRX01000042_1	1.25\|694\|27\|NZ_ALRX01000042\|PILER-CR	694-720	27	NZ_AP018731	Streptococcus dysgalactiae strain Kdys0611 plasmid pFGCSD5, complete sequence	137-163	2	0.926
NZ_ALRX01000042_1	1.25\|694\|27\|NZ_ALRX01000042\|PILER-CR	694-720	27	MK448662	Streptococcus satellite phage Javan97, complete genome	1669-1695	2	0.926
NZ_ALRX01000042_1	1.14\|97\|30\|NZ_ALRX01000042\|PILER-CR,CRISPRCasFinder	97-126	30	MK448851	Streptococcus phage Javan14, complete genome	31525-31554	3	0.9
NZ_ALRX01000042_1	1.22\|625\|30\|NZ_ALRX01000042\|CRISPRCasFinder	625-654	30	MK448559	Streptococcus satellite phage Javan596, complete genome	3484-3513	3	0.9
NZ_ALRX01000042_1	1.22\|625\|30\|NZ_ALRX01000042\|CRISPRCasFinder	625-654	30	MK448553	Streptococcus satellite phage Javan588, complete genome	3484-3513	3	0.9
NZ_ALRX01000042_1	1.22\|625\|30\|NZ_ALRX01000042\|CRISPRCasFinder	625-654	30	MK448540	Streptococcus satellite phage Javan559, complete genome	3484-3513	3	0.9
NZ_ALRX01000042_1	1.22\|625\|30\|NZ_ALRX01000042\|CRISPRCasFinder	625-654	30	MK448550	Streptococcus satellite phage Javan581, complete genome	3484-3513	3	0.9
NZ_ALRX01000042_1	1.22\|625\|30\|NZ_ALRX01000042\|CRISPRCasFinder	625-654	30	MK448517	Streptococcus satellite phage Javan495, complete genome	4199-4228	3	0.9
NZ_ALRX01000042_1	1.22\|625\|30\|NZ_ALRX01000042\|CRISPRCasFinder	625-654	30	MK448385	Streptococcus satellite phage Javan251, complete genome	3143-3172	3	0.9
NZ_ALRX01000042_1	1.2\|97\|36\|NZ_ALRX01000042\|CRT	97-132	36	MK448971	Streptococcus phage Javan52, complete genome	32571-32606	4	0.889
NZ_ALRX01000042_1	1.2\|97\|36\|NZ_ALRX01000042\|CRT	97-132	36	MK448956	Streptococcus phage Javan48, complete genome	30890-30925	4	0.889
NZ_ALRX01000042_1	1.9\|559\|36\|NZ_ALRX01000042\|CRT	559-594	36	MK448736	Streptococcus phage Javan35, complete genome	12531-12566	4	0.889
NZ_ALRX01000042_1	1.9\|559\|36\|NZ_ALRX01000042\|CRT	559-594	36	MK448781	Streptococcus phage Javan5, complete genome	14553-14588	4	0.889
NZ_ALRX01000042_1	1.9\|559\|36\|NZ_ALRX01000042\|CRT	559-594	36	MK448938	Streptococcus phage Javan44, complete genome	12532-12567	4	0.889
NZ_ALRX01000042_1	1.9\|559\|36\|NZ_ALRX01000042\|CRT	559-594	36	MK448911	Streptococcus phage Javan34, complete genome	12531-12566	4	0.889
NZ_ALRX01000042_1	1.9\|559\|36\|NZ_ALRX01000042\|CRT	559-594	36	MK448916	Streptococcus phage Javan36, complete genome	12531-12566	4	0.889
NZ_ALRX01000042_1	1.11\|691\|36\|NZ_ALRX01000042\|CRT	691-726	36	MK448350	Streptococcus satellite phage Javan19, complete genome	1594-1629	4	0.889
NZ_ALRX01000042_1	1.16\|229\|30\|NZ_ALRX01000042\|PILER-CR,CRISPRCasFinder	229-258	30	NC_009673	Bacillus cytotoxicus NVH 391-98 plasmid pBC9801, complete sequence	7039-7068	4	0.867
NZ_ALRX01000042_1	1.18\|361\|30\|NZ_ALRX01000042\|PILER-CR,CRISPRCasFinder	361-390	30	NZ_CP040345	Bacillus albus strain DLOU-Yingkou plasmid unnamed1, complete sequence	474277-474306	4	0.867
NZ_ALRX01000042_1	1.22\|625\|30\|NZ_ALRX01000042\|CRISPRCasFinder	625-654	30	MK448511	Streptococcus satellite phage Javan473, complete genome	3219-3248	4	0.867
NZ_ALRX01000042_1	1.22\|625\|30\|NZ_ALRX01000042\|CRISPRCasFinder	625-654	30	MK448437	Streptococcus satellite phage Javan334, complete genome	3448-3477	4	0.867
NZ_ALRX01000042_1	1.22\|625\|30\|NZ_ALRX01000042\|CRISPRCasFinder	625-654	30	MK448645	Streptococcus satellite phage Javan757, complete genome	3878-3907	4	0.867
NZ_ALRX01000042_1	1.22\|625\|30\|NZ_ALRX01000042\|CRISPRCasFinder	625-654	30	MK448380	Streptococcus satellite phage Javan24, complete genome	4610-4639	4	0.867
NZ_ALRX01000042_1	1.22\|625\|30\|NZ_ALRX01000042\|CRISPRCasFinder	625-654	30	MK448440	Streptococcus satellite phage Javan338, complete genome	3449-3478	4	0.867
NZ_ALRX01000042_1	1.8\|493\|36\|NZ_ALRX01000042\|CRT	493-528	36	MK448837	Streptococcus phage Javan10, complete genome	6966-7001	5	0.861
NZ_ALRX01000042_1	1.9\|559\|36\|NZ_ALRX01000042\|CRT	559-594	36	MK448729	Streptococcus phage Javan31, complete genome	15067-15102	5	0.861
NZ_ALRX01000042_1	1.9\|559\|36\|NZ_ALRX01000042\|CRT	559-594	36	MK448691	Streptococcus phage Javan17, complete genome	15067-15102	5	0.861
NZ_ALRX01000042_1	1.9\|559\|36\|NZ_ALRX01000042\|CRT	559-594	36	MK448948	Streptococcus phage Javan46, complete genome	15011-15046	5	0.861
NZ_ALRX01000042_1	1.10\|625\|36\|NZ_ALRX01000042\|CRT	625-660	36	MK448507	Streptococcus satellite phage Javan463, complete genome	4744-4779	5	0.861
NZ_ALRX01000042_1	1.10\|625\|36\|NZ_ALRX01000042\|CRT	625-660	36	MK448510	Streptococcus satellite phage Javan469, complete genome	3353-3388	5	0.861
NZ_ALRX01000042_1	1.10\|625\|36\|NZ_ALRX01000042\|CRT	625-660	36	MK448521	Streptococcus satellite phage Javan518, complete genome	3406-3441	5	0.861
NZ_ALRX01000042_1	1.10\|625\|36\|NZ_ALRX01000042\|CRT	625-660	36	MK448501	Streptococcus satellite phage Javan449, complete genome	3415-3450	5	0.861
NZ_ALRX01000042_1	1.10\|625\|36\|NZ_ALRX01000042\|CRT	625-660	36	MK448343	Streptococcus satellite phage Javan162, complete genome	4744-4779	5	0.861
NZ_ALRX01000042_1	1.10\|625\|36\|NZ_ALRX01000042\|CRT	625-660	36	MK448329	Streptococcus satellite phage Javan134, complete genome	4744-4779	5	0.861
NZ_ALRX01000042_1	1.10\|625\|36\|NZ_ALRX01000042\|CRT	625-660	36	MK448325	Streptococcus satellite phage Javan125, complete genome	4744-4779	5	0.861
NZ_ALRX01000042_1	1.10\|625\|36\|NZ_ALRX01000042\|CRT	625-660	36	MK448504	Streptococcus satellite phage Javan455, complete genome	3466-3501	5	0.861
NZ_ALRX01000042_1	1.10\|625\|36\|NZ_ALRX01000042\|CRT	625-660	36	MK448516	Streptococcus satellite phage Javan490, complete genome	3405-3440	5	0.861
NZ_ALRX01000042_1	1.10\|625\|36\|NZ_ALRX01000042\|CRT	625-660	36	MK448335	Streptococcus satellite phage Javan148, complete genome	4744-4779	5	0.861
NZ_ALRX01000042_1	1.18\|361\|30\|NZ_ALRX01000042\|PILER-CR,CRISPRCasFinder	361-390	30	NZ_CP040345	Bacillus albus strain DLOU-Yingkou plasmid unnamed1, complete sequence	473664-473693	5	0.833
NZ_ALRX01000042_1	1.18\|361\|30\|NZ_ALRX01000042\|PILER-CR,CRISPRCasFinder	361-390	30	NZ_LR214939	Mycoplasma salivarium strain NCTC10113 plasmid 2	655420-655449	5	0.833
NZ_ALRX01000042_1	1.22\|625\|30\|NZ_ALRX01000042\|CRISPRCasFinder	625-654	30	MK448616	Streptococcus satellite phage Javan729, complete genome	6309-6338	5	0.833
NZ_ALRX01000042_1	1.22\|625\|30\|NZ_ALRX01000042\|CRISPRCasFinder	625-654	30	MK448661	Streptococcus satellite phage Javan96, complete genome	4227-4256	5	0.833
NZ_ALRX01000042_1	1.6\|361\|36\|NZ_ALRX01000042\|CRT	361-396	36	NZ_CP040345	Bacillus albus strain DLOU-Yingkou plasmid unnamed1, complete sequence	474277-474312	6	0.833
NZ_ALRX01000042_1	1.11\|691\|36\|NZ_ALRX01000042\|CRT	691-726	36	NZ_AP018727	Streptococcus dysgalactiae strain Kdys0611 plasmid pFGCSD1, complete sequence	21389-21424	6	0.833
NZ_ALRX01000042_1	1.11\|691\|36\|NZ_ALRX01000042\|CRT	691-726	36	NZ_AP018728	Streptococcus dysgalactiae strain Kdys0611 plasmid pFGCSD2, complete sequence	10365-10400	6	0.833
NZ_ALRX01000042_1	1.11\|691\|36\|NZ_ALRX01000042\|CRT	691-726	36	NZ_AP018730	Streptococcus dysgalactiae strain Kdys0611 plasmid pFGCSD4, complete sequence	8833-8868	6	0.833
NZ_ALRX01000042_1	1.11\|691\|36\|NZ_ALRX01000042\|CRT	691-726	36	NZ_AP018731	Streptococcus dysgalactiae strain Kdys0611 plasmid pFGCSD5, complete sequence	136-171	6	0.833
NZ_ALRX01000042_1	1.11\|691\|36\|NZ_ALRX01000042\|CRT	691-726	36	MK448662	Streptococcus satellite phage Javan97, complete genome	1661-1696	6	0.833
NZ_ALRX01000042_1	1.18\|361\|30\|NZ_ALRX01000042\|PILER-CR,CRISPRCasFinder	361-390	30	NZ_CP007625	Bacillus pseudomycoides strain 219298 plasmid unnamed, complete sequence	284952-284981	6	0.8
NZ_ALRX01000042_1	1.18\|361\|30\|NZ_ALRX01000042\|PILER-CR,CRISPRCasFinder	361-390	30	NZ_CP009650	Bacillus pseudomycoides strain BTZ plasmid pBTZ_1, complete sequence	227979-228008	6	0.8
NZ_ALRX01000042_1	1.18\|361\|30\|NZ_ALRX01000042\|PILER-CR,CRISPRCasFinder	361-390	30	NZ_CP045607	Bacillus cereus strain SB1 plasmid p1, complete sequence	493398-493427	6	0.8
NZ_ALRX01000042_1	1.18\|361\|30\|NZ_ALRX01000042\|PILER-CR,CRISPRCasFinder	361-390	30	MN693492	Marine virus AFVG_25M361, complete genome	19989-20018	6	0.8
NZ_ALRX01000042_1	1.20\|493\|30\|NZ_ALRX01000042\|PILER-CR,CRISPRCasFinder	493-522	30	NZ_CP048628	Megamonas funiformis strain JCM 14723 plasmid putative_Mfuni1, complete sequence	37661-37690	6	0.8
NZ_ALRX01000042_1	1.2\|97\|36\|NZ_ALRX01000042\|CRT	97-132	36	MK448851	Streptococcus phage Javan14, complete genome	31525-31560	7	0.806
NZ_ALRX01000042_1	1.8\|493\|36\|NZ_ALRX01000042\|CRT	493-528	36	MK448971	Streptococcus phage Javan52, complete genome	11827-11862	7	0.806
NZ_ALRX01000042_1	1.8\|493\|36\|NZ_ALRX01000042\|CRT	493-528	36	MH853356	Streptococcus phage LF2, partial genome	8570-8605	7	0.806
NZ_ALRX01000042_1	1.9\|559\|36\|NZ_ALRX01000042\|CRT	559-594	36	MK448673	Streptococcus phage Javan119, complete genome	13656-13691	7	0.806
NZ_ALRX01000042_1	1.10\|625\|36\|NZ_ALRX01000042\|CRT	625-660	36	MK448395	Streptococcus satellite phage Javan279, complete genome	3299-3334	7	0.806
NZ_ALRX01000042_1	1.14\|97\|30\|NZ_ALRX01000042\|PILER-CR,CRISPRCasFinder	97-126	30	NZ_CP013553	Rhizobium phaseoli strain N931 plasmid pRphaN931a, complete sequence	206696-206725	7	0.767
NZ_ALRX01000042_1	1.14\|97\|30\|NZ_ALRX01000042\|PILER-CR,CRISPRCasFinder	97-126	30	NZ_CP013586	Rhizobium phaseoli strain N161 plasmid pRphaN161a, complete sequence	211390-211419	7	0.767
NZ_ALRX01000042_1	1.14\|97\|30\|NZ_ALRX01000042\|PILER-CR,CRISPRCasFinder	97-126	30	NZ_CP013564	Rhizobium phaseoli strain N831 plasmid pRphaN831a, complete sequence	206696-206725	7	0.767
NZ_ALRX01000042_1	1.15\|163\|30\|NZ_ALRX01000042\|PILER-CR,CRISPRCasFinder	163-192	30	MN694670	Marine virus AFVG_250M589, complete genome	29513-29542	7	0.767
NZ_ALRX01000042_1	1.15\|163\|30\|NZ_ALRX01000042\|PILER-CR,CRISPRCasFinder	163-192	30	HQ634190	Cyanophage Syn2 genomic sequence	105428-105457	7	0.767
NZ_ALRX01000042_1	1.15\|163\|30\|NZ_ALRX01000042\|PILER-CR,CRISPRCasFinder	163-192	30	GU071097	Synechococcus phage S-SSM5, complete genome	171105-171134	7	0.767
NZ_ALRX01000042_1	1.15\|163\|30\|NZ_ALRX01000042\|PILER-CR,CRISPRCasFinder	163-192	30	NC_015286	Synechococcus phage Syn19, complete genome	171318-171347	7	0.767
NZ_ALRX01000042_1	1.16\|229\|30\|NZ_ALRX01000042\|PILER-CR,CRISPRCasFinder	229-258	30	NZ_CP042375	Leuconostoc carnosum strain CBA3620 plasmid unnamed1, complete sequence	49735-49764	7	0.767
NZ_ALRX01000042_1	1.17\|295\|30\|NZ_ALRX01000042\|PILER-CR,CRISPRCasFinder	295-324	30	NZ_CP013072	Sphingobium indicum B90A plasmid pSRL2, complete sequence	93023-93052	7	0.767
NZ_ALRX01000042_1	1.17\|295\|30\|NZ_ALRX01000042\|PILER-CR,CRISPRCasFinder	295-324	30	NZ_CP005190	Sphingobium sp. MI1205 plasmid pMI1, complete sequence	70816-70845	7	0.767
NZ_ALRX01000042_1	1.18\|361\|30\|NZ_ALRX01000042\|PILER-CR,CRISPRCasFinder	361-390	30	NZ_CP020744	Bacillus mycoides strain Gnyt1 plasmid unnamed1, complete sequence	311665-311694	7	0.767
NZ_ALRX01000042_1	1.20\|493\|30\|NZ_ALRX01000042\|PILER-CR,CRISPRCasFinder	493-522	30	NZ_CP028227	Lactobacillus plantarum strain SRCM101187 plasmid unnamed1, complete sequence	51262-51291	7	0.767
NZ_ALRX01000042_1	1.20\|493\|30\|NZ_ALRX01000042\|PILER-CR,CRISPRCasFinder	493-522	30	NZ_CP025691	Lactobacillus plantarum strain IRG1 plasmid pIRG101, complete sequence	30677-30706	7	0.767
NZ_ALRX01000042_1	1.20\|493\|30\|NZ_ALRX01000042\|PILER-CR,CRISPRCasFinder	493-522	30	NZ_CP025691	Lactobacillus plantarum strain IRG1 plasmid pIRG101, complete sequence	40808-40837	7	0.767
NZ_ALRX01000042_1	1.20\|493\|30\|NZ_ALRX01000042\|PILER-CR,CRISPRCasFinder	493-522	30	NZ_CP021502	Lactobacillus plantarum strain SRCM102022 plasmid pPL2022-1, complete sequence	61827-61856	7	0.767
NZ_ALRX01000042_1	1.20\|493\|30\|NZ_ALRX01000042\|PILER-CR,CRISPRCasFinder	493-522	30	NZ_CP016271	Lactobacillus plantarum subsp. plantarum strain CGMCC 1.557 plasmid pLp1, complete sequence	4598-4627	7	0.767
NZ_ALRX01000042_1	1.20\|493\|30\|NZ_ALRX01000042\|PILER-CR,CRISPRCasFinder	493-522	30	NZ_CP024060	Lactobacillus plantarum strain KACC 92189 plasmid unnamed2	49470-49499	7	0.767
NZ_ALRX01000042_1	1.20\|493\|30\|NZ_ALRX01000042\|PILER-CR,CRISPRCasFinder	493-522	30	NZ_CP032360	Lactobacillus plantarum strain ZFM55 plasmid unnamed1, complete sequence	31271-31300	7	0.767
NZ_ALRX01000042_1	1.20\|493\|30\|NZ_ALRX01000042\|PILER-CR,CRISPRCasFinder	493-522	30	NZ_CP023303	Lactobacillus plantarum strain pc-26 plasmid p.pc-2602, complete sequence	54034-54063	7	0.767
NZ_ALRX01000042_1	1.20\|493\|30\|NZ_ALRX01000042\|PILER-CR,CRISPRCasFinder	493-522	30	NZ_CP032643	Lactobacillus plantarum strain ZFM9 plasmid unnamed1, complete sequence	47790-47819	7	0.767
NZ_ALRX01000042_1	1.20\|493\|30\|NZ_ALRX01000042\|PILER-CR,CRISPRCasFinder	493-522	30	NZ_CP035146	Lactobacillus plantarum strain SRCM103357 plasmid unnamed3	20183-20212	7	0.767
NZ_ALRX01000042_1	1.20\|493\|30\|NZ_ALRX01000042\|PILER-CR,CRISPRCasFinder	493-522	30	NZ_CP028262	Lactobacillus plantarum strain SRCM102737 plasmid unnamed1, complete sequence	25708-25737	7	0.767
NZ_ALRX01000042_1	1.20\|493\|30\|NZ_ALRX01000042\|PILER-CR,CRISPRCasFinder	493-522	30	NZ_CP048024	Lactobacillus plantarum strain CACC 558 plasmid p2CACC558, complete sequence	9371-9400	7	0.767
NZ_ALRX01000042_1	1.20\|493\|30\|NZ_ALRX01000042\|PILER-CR,CRISPRCasFinder	493-522	30	NZ_CP028223	Lactobacillus plantarum strain SRCM101105 plasmid unnamed1, complete sequence	57371-57400	7	0.767
NZ_ALRX01000042_1	1.20\|493\|30\|NZ_ALRX01000042\|PILER-CR,CRISPRCasFinder	493-522	30	NZ_CP028276	Lactobacillus plantarum strain SRCM100995 plasmid unnamed1, complete sequence	44739-44768	7	0.767
NZ_ALRX01000042_1	1.20\|493\|30\|NZ_ALRX01000042\|PILER-CR,CRISPRCasFinder	493-522	30	NZ_CP028244	Lactobacillus plantarum strain SRCM101518 plasmid unnamed3, complete sequence	33926-33955	7	0.767
NZ_ALRX01000042_1	1.20\|493\|30\|NZ_ALRX01000042\|PILER-CR,CRISPRCasFinder	493-522	30	NZ_CP054261	Lactobacillus plantarum strain TCI507 plasmid unnamed2	19083-19112	7	0.767
NZ_ALRX01000042_1	1.21\|559\|30\|NZ_ALRX01000042\|CRISPRCasFinder	559-588	30	NZ_CP024792	Nostoc flagelliforme CCNUN1 plasmid pNFSY07, complete sequence	309901-309930	7	0.767
NZ_ALRX01000042_1	1.21\|559\|30\|NZ_ALRX01000042\|CRISPRCasFinder	559-588	30	NC_047733	Synechococcus phage S-RIM8 isolate RW_22_0300, complete genome	6321-6350	7	0.767
NZ_ALRX01000042_1	1.21\|559\|30\|NZ_ALRX01000042\|CRISPRCasFinder	559-588	30	JF974289	Synechococcus phage S-RIM8 A.HR3, complete genome	6321-6350	7	0.767
NZ_ALRX01000042_1	1.21\|559\|30\|NZ_ALRX01000042\|CRISPRCasFinder	559-588	30	MK493323	Synechococcus phage S-RIM8 isolate RW_03_0617, complete genome	6323-6352	7	0.767
NZ_ALRX01000042_1	1.21\|559\|30\|NZ_ALRX01000042\|CRISPRCasFinder	559-588	30	MK493325	Synechococcus phage S-RIM8 isolate RW_62_0316, complete genome	6312-6341	7	0.767
NZ_ALRX01000042_1	1.21\|559\|30\|NZ_ALRX01000042\|CRISPRCasFinder	559-588	30	MK493322	Synechococcus phage S-RIM8 isolate RW_01_0115_WH8101, complete genome	6312-6341	7	0.767
NZ_ALRX01000042_1	1.21\|559\|30\|NZ_ALRX01000042\|CRISPRCasFinder	559-588	30	KX349288	Synechococcus phage S-RIM8 isolate RW_08_0711, complete genome	6312-6341	7	0.767
NZ_ALRX01000042_1	1.21\|559\|30\|NZ_ALRX01000042\|CRISPRCasFinder	559-588	30	NC_020486	Synechococcus phage S-RIM8 A.HR1, complete genome	6321-6350	7	0.767
NZ_ALRX01000042_1	1.21\|559\|30\|NZ_ALRX01000042\|CRISPRCasFinder	559-588	30	KX349286	Synechococcus phage S-RIM8 isolate RW_03_0807_WH8101, complete genome	6315-6344	7	0.767
NZ_ALRX01000042_1	1.21\|559\|30\|NZ_ALRX01000042\|CRISPRCasFinder	559-588	30	HQ317385	Synechococcus phage S-RIM8 A.HR5, complete genome	6321-6350	7	0.767
NZ_ALRX01000042_1	1.21\|559\|30\|NZ_ALRX01000042\|CRISPRCasFinder	559-588	30	MK493324	Synechococcus phage S-RIM8 isolate RW_22_0214, complete genome	6312-6341	7	0.767
NZ_ALRX01000042_1	1.21\|559\|30\|NZ_ALRX01000042\|CRISPRCasFinder	559-588	30	KX349290	Synechococcus phage S-RIM8 isolate RW_25_1112, complete genome	6312-6341	7	0.767
NZ_ALRX01000042_1	1.21\|559\|30\|NZ_ALRX01000042\|CRISPRCasFinder	559-588	30	KX349285	Synechococcus phage S-RIM8 isolate RW_01_0212_WH8101, complete genome	6323-6352	7	0.767
NZ_ALRX01000042_1	1.21\|559\|30\|NZ_ALRX01000042\|CRISPRCasFinder	559-588	30	KX349287	Synechococcus phage S-RIM8 isolate RW_06_0613, complete genome	6312-6341	7	0.767
NZ_ALRX01000042_1	1.21\|559\|30\|NZ_ALRX01000042\|CRISPRCasFinder	559-588	30	JF974293	Cyanophage KBS-M-1A genomic sequence	39771-39800	7	0.767
NZ_ALRX01000042_1	1.10\|625\|36\|NZ_ALRX01000042\|CRT	625-660	36	MK448559	Streptococcus satellite phage Javan596, complete genome	3478-3513	8	0.778
NZ_ALRX01000042_1	1.10\|625\|36\|NZ_ALRX01000042\|CRT	625-660	36	MK448553	Streptococcus satellite phage Javan588, complete genome	3478-3513	8	0.778
NZ_ALRX01000042_1	1.10\|625\|36\|NZ_ALRX01000042\|CRT	625-660	36	MK448540	Streptococcus satellite phage Javan559, complete genome	3478-3513	8	0.778
NZ_ALRX01000042_1	1.10\|625\|36\|NZ_ALRX01000042\|CRT	625-660	36	MK448550	Streptococcus satellite phage Javan581, complete genome	3478-3513	8	0.778
NZ_ALRX01000042_1	1.10\|625\|36\|NZ_ALRX01000042\|CRT	625-660	36	MK448517	Streptococcus satellite phage Javan495, complete genome	4193-4228	8	0.778
NZ_ALRX01000042_1	1.10\|625\|36\|NZ_ALRX01000042\|CRT	625-660	36	MK448385	Streptococcus satellite phage Javan251, complete genome	3137-3172	8	0.778
NZ_ALRX01000042_1	1.16\|229\|30\|NZ_ALRX01000042\|PILER-CR,CRISPRCasFinder	229-258	30	NZ_LR214939	Mycoplasma salivarium strain NCTC10113 plasmid 2	100053-100082	8	0.733
NZ_ALRX01000042_1	1.17\|295\|30\|NZ_ALRX01000042\|PILER-CR,CRISPRCasFinder	295-324	30	NZ_CP022991	Paraburkholderia aromaticivorans strain BN5 plasmid pBN1, complete sequence	307848-307877	8	0.733
NZ_ALRX01000042_1	1.18\|361\|30\|NZ_ALRX01000042\|PILER-CR,CRISPRCasFinder	361-390	30	MN694072	Marine virus AFVG_250M222, complete genome	22201-22230	8	0.733
NZ_ALRX01000042_1	1.19\|427\|30\|NZ_ALRX01000042\|PILER-CR,CRISPRCasFinder	427-456	30	MK288022	Bacillus phage pW4, complete genome	27741-27770	8	0.733
NZ_ALRX01000042_1	1.19\|427\|30\|NZ_ALRX01000042\|PILER-CR,CRISPRCasFinder	427-456	30	KT070866	Bacillus phage PBC4, complete genome	15693-15722	8	0.733
NZ_ALRX01000042_1	1.20\|493\|30\|NZ_ALRX01000042\|PILER-CR,CRISPRCasFinder	493-522	30	NZ_CP035159	Lactobacillus plantarum strain SRCM103362 plasmid unnamed3	4094-4123	8	0.733
NZ_ALRX01000042_1	1.21\|559\|30\|NZ_ALRX01000042\|CRISPRCasFinder	559-588	30	NC_048827	Vibrio phage vB_VchM_Kuja, complete genome	112186-112215	8	0.733
NZ_ALRX01000042_1	1.22\|625\|30\|NZ_ALRX01000042\|CRISPRCasFinder	625-654	30	NZ_MG205641	Paeniclostridium sordellii strain 7508-A plasmid pCS1-7, complete sequence	31065-31094	8	0.733
NZ_ALRX01000042_1	1.22\|625\|30\|NZ_ALRX01000042\|CRISPRCasFinder	625-654	30	NZ_MG205643	Paeniclostridium sordellii strain S0804018 plasmid pCS1-5, complete sequence	24169-24198	8	0.733
NZ_ALRX01000042_1	1.22\|625\|30\|NZ_ALRX01000042\|CRISPRCasFinder	625-654	30	NZ_MG205642	Paeniclostridium sordellii strain 7543-A plasmid pCS1-6, complete sequence	31065-31094	8	0.733
NZ_ALRX01000042_1	1.23\|691\|30\|NZ_ALRX01000042\|CRISPRCasFinder	691-720	30	NC_005250	Vibrio anguillarum 775 plasmid pJM1, complete sequence	6381-6410	8	0.733
NZ_ALRX01000042_1	1.23\|691\|30\|NZ_ALRX01000042\|CRISPRCasFinder	691-720	30	NZ_CP020532	Vibrio anguillarum strain 425 plasmid pEIB1, complete sequence	39190-39219	8	0.733
NZ_ALRX01000042_1	1.23\|691\|30\|NZ_ALRX01000042\|CRISPRCasFinder	691-720	30	NZ_LK021128	Vibrio anguillarum strain NB10 plasmid p67vangNB10, complete sequence	34096-34125	8	0.733
NZ_ALRX01000042_1	1.23\|691\|30\|NZ_ALRX01000042\|CRISPRCasFinder	691-720	30	NC_022225	Vibrio anguillarum M3 plasmid unnamed, complete sequence	30023-30052	8	0.733
NZ_ALRX01000042_1	1.23\|691\|30\|NZ_ALRX01000042\|CRISPRCasFinder	691-720	30	NZ_CP023210	Vibrio anguillarum strain ATCC-68554 plasmid p65, complete sequence	34435-34464	8	0.733
NZ_ALRX01000042_1	1.10\|625\|36\|NZ_ALRX01000042\|CRT	625-660	36	MK448511	Streptococcus satellite phage Javan473, complete genome	3213-3248	9	0.75
NZ_ALRX01000042_1	1.10\|625\|36\|NZ_ALRX01000042\|CRT	625-660	36	MK448437	Streptococcus satellite phage Javan334, complete genome	3442-3477	9	0.75
NZ_ALRX01000042_1	1.10\|625\|36\|NZ_ALRX01000042\|CRT	625-660	36	MK448645	Streptococcus satellite phage Javan757, complete genome	3872-3907	9	0.75
NZ_ALRX01000042_1	1.10\|625\|36\|NZ_ALRX01000042\|CRT	625-660	36	MK448380	Streptococcus satellite phage Javan24, complete genome	4604-4639	9	0.75
NZ_ALRX01000042_1	1.10\|625\|36\|NZ_ALRX01000042\|CRT	625-660	36	MK448440	Streptococcus satellite phage Javan338, complete genome	3443-3478	9	0.75
NZ_ALRX01000042_1	1.15\|163\|30\|NZ_ALRX01000042\|PILER-CR,CRISPRCasFinder	163-192	30	NZ_LR215032	Mycoplasma gallopavonis strain NCTC10186 plasmid 2	226743-226772	9	0.7
NZ_ALRX01000042_1	1.15\|163\|30\|NZ_ALRX01000042\|PILER-CR,CRISPRCasFinder	163-192	30	MH617331	Microviridae sp. isolate ctbd619, complete genome	1763-1792	9	0.7
NZ_ALRX01000042_1	1.18\|361\|30\|NZ_ALRX01000042\|PILER-CR,CRISPRCasFinder	361-390	30	MG592576	Vibrio phage 1.206.O._10N.222.51.B10, partial genome	27486-27515	9	0.7
NZ_ALRX01000042_1	1.6\|361\|36\|NZ_ALRX01000042\|CRT	361-396	36	MG945789	UNVERIFIED: Microviridae sp. isolate 4354-1801, complete genome	6311-6346	10	0.722
NZ_ALRX01000042_1	1.10\|625\|36\|NZ_ALRX01000042\|CRT	625-660	36	NZ_MG205641	Paeniclostridium sordellii strain 7508-A plasmid pCS1-7, complete sequence	31065-31100	10	0.722
NZ_ALRX01000042_1	1.10\|625\|36\|NZ_ALRX01000042\|CRT	625-660	36	NZ_MG205643	Paeniclostridium sordellii strain S0804018 plasmid pCS1-5, complete sequence	24169-24204	10	0.722
NZ_ALRX01000042_1	1.10\|625\|36\|NZ_ALRX01000042\|CRT	625-660	36	NZ_MG205642	Paeniclostridium sordellii strain 7543-A plasmid pCS1-6, complete sequence	31065-31100	10	0.722
NZ_ALRX01000042_1	1.22\|625\|30\|NZ_ALRX01000042\|CRISPRCasFinder	625-654	30	NC_015712	Clostridium perfringens plasmid pCPPB-1, complete sequence	16954-16983	10	0.667

1. spacer 1.14|97|30|NZ_ALRX01000042|PILER-CR,CRISPRCasFinder matches to MK448971 (Streptococcus phage Javan52, complete genome) position: , mismatch: 0, identity: 1.0

aaactaaagatattgactccctgcaggata	CRISPR spacer
aaactaaagatattgactccctgcaggata	Protospacer
******************************

2. spacer 1.14|97|30|NZ_ALRX01000042|PILER-CR,CRISPRCasFinder matches to MK448956 (Streptococcus phage Javan48, complete genome) position: , mismatch: 0, identity: 1.0

aaactaaagatattgactccctgcaggata	CRISPR spacer
aaactaaagatattgactccctgcaggata	Protospacer
******************************

3. spacer 1.20|493|30|NZ_ALRX01000042|PILER-CR,CRISPRCasFinder matches to MK448837 (Streptococcus phage Javan10, complete genome) position: , mismatch: 0, identity: 1.0

tcctctttctatgtttcaattgccaatttt	CRISPR spacer
tcctctttctatgtttcaattgccaatttt	Protospacer
******************************

4. spacer 1.21|559|30|NZ_ALRX01000042|CRISPRCasFinder matches to MK448736 (Streptococcus phage Javan35, complete genome) position: , mismatch: 0, identity: 1.0

aaaaaatcttgaatcatcatataaaatctt	CRISPR spacer
aaaaaatcttgaatcatcatataaaatctt	Protospacer
******************************

5. spacer 1.21|559|30|NZ_ALRX01000042|CRISPRCasFinder matches to MK448781 (Streptococcus phage Javan5, complete genome) position: , mismatch: 0, identity: 1.0

aaaaaatcttgaatcatcatataaaatctt	CRISPR spacer
aaaaaatcttgaatcatcatataaaatctt	Protospacer
******************************

6. spacer 1.21|559|30|NZ_ALRX01000042|CRISPRCasFinder matches to MK448938 (Streptococcus phage Javan44, complete genome) position: , mismatch: 0, identity: 1.0

aaaaaatcttgaatcatcatataaaatctt	CRISPR spacer
aaaaaatcttgaatcatcatataaaatctt	Protospacer
******************************

7. spacer 1.21|559|30|NZ_ALRX01000042|CRISPRCasFinder matches to MK448911 (Streptococcus phage Javan34, complete genome) position: , mismatch: 0, identity: 1.0

aaaaaatcttgaatcatcatataaaatctt	CRISPR spacer
aaaaaatcttgaatcatcatataaaatctt	Protospacer
******************************

8. spacer 1.21|559|30|NZ_ALRX01000042|CRISPRCasFinder matches to MK448916 (Streptococcus phage Javan36, complete genome) position: , mismatch: 0, identity: 1.0

aaaaaatcttgaatcatcatataaaatctt	CRISPR spacer
aaaaaatcttgaatcatcatataaaatctt	Protospacer
******************************

9. spacer 1.22|625|30|NZ_ALRX01000042|CRISPRCasFinder matches to MK448507 (Streptococcus satellite phage Javan463, complete genome) position: , mismatch: 0, identity: 1.0

agctatctttttcgtactttgaaatagttt	CRISPR spacer
agctatctttttcgtactttgaaatagttt	Protospacer
******************************

10. spacer 1.22|625|30|NZ_ALRX01000042|CRISPRCasFinder matches to MK448510 (Streptococcus satellite phage Javan469, complete genome) position: , mismatch: 0, identity: 1.0

agctatctttttcgtactttgaaatagttt	CRISPR spacer
agctatctttttcgtactttgaaatagttt	Protospacer
******************************

11. spacer 1.22|625|30|NZ_ALRX01000042|CRISPRCasFinder matches to MK448521 (Streptococcus satellite phage Javan518, complete genome) position: , mismatch: 0, identity: 1.0

agctatctttttcgtactttgaaatagttt	CRISPR spacer
agctatctttttcgtactttgaaatagttt	Protospacer
******************************

12. spacer 1.22|625|30|NZ_ALRX01000042|CRISPRCasFinder matches to MK448501 (Streptococcus satellite phage Javan449, complete genome) position: , mismatch: 0, identity: 1.0

agctatctttttcgtactttgaaatagttt	CRISPR spacer
agctatctttttcgtactttgaaatagttt	Protospacer
******************************

13. spacer 1.22|625|30|NZ_ALRX01000042|CRISPRCasFinder matches to MK448343 (Streptococcus satellite phage Javan162, complete genome) position: , mismatch: 0, identity: 1.0

agctatctttttcgtactttgaaatagttt	CRISPR spacer
agctatctttttcgtactttgaaatagttt	Protospacer
******************************

14. spacer 1.22|625|30|NZ_ALRX01000042|CRISPRCasFinder matches to MK448329 (Streptococcus satellite phage Javan134, complete genome) position: , mismatch: 0, identity: 1.0

agctatctttttcgtactttgaaatagttt	CRISPR spacer
agctatctttttcgtactttgaaatagttt	Protospacer
******************************

15. spacer 1.22|625|30|NZ_ALRX01000042|CRISPRCasFinder matches to MK448325 (Streptococcus satellite phage Javan125, complete genome) position: , mismatch: 0, identity: 1.0

agctatctttttcgtactttgaaatagttt	CRISPR spacer
agctatctttttcgtactttgaaatagttt	Protospacer
******************************

16. spacer 1.22|625|30|NZ_ALRX01000042|CRISPRCasFinder matches to MK448504 (Streptococcus satellite phage Javan455, complete genome) position: , mismatch: 0, identity: 1.0

agctatctttttcgtactttgaaatagttt	CRISPR spacer
agctatctttttcgtactttgaaatagttt	Protospacer
******************************

17. spacer 1.22|625|30|NZ_ALRX01000042|CRISPRCasFinder matches to MK448516 (Streptococcus satellite phage Javan490, complete genome) position: , mismatch: 0, identity: 1.0

agctatctttttcgtactttgaaatagttt	CRISPR spacer
agctatctttttcgtactttgaaatagttt	Protospacer
******************************

18. spacer 1.22|625|30|NZ_ALRX01000042|CRISPRCasFinder matches to MK448335 (Streptococcus satellite phage Javan148, complete genome) position: , mismatch: 0, identity: 1.0

agctatctttttcgtactttgaaatagttt	CRISPR spacer
agctatctttttcgtactttgaaatagttt	Protospacer
******************************

19. spacer 1.23|691|30|NZ_ALRX01000042|CRISPRCasFinder matches to MK448350 (Streptococcus satellite phage Javan19, complete genome) position: , mismatch: 0, identity: 1.0

tggaaaaagggcaaagtattcttgattata	CRISPR spacer
tggaaaaagggcaaagtattcttgattata	Protospacer
******************************

20. spacer 1.25|694|27|NZ_ALRX01000042|PILER-CR matches to MK448350 (Streptococcus satellite phage Javan19, complete genome) position: , mismatch: 0, identity: 1.0

ggaaaaagggcaaagtattcttgatta	CRISPR spacer
ggaaaaagggcaaagtattcttgatta	Protospacer
***************************

21. spacer 1.21|559|30|NZ_ALRX01000042|CRISPRCasFinder matches to MK448729 (Streptococcus phage Javan31, complete genome) position: , mismatch: 1, identity: 0.967

aaaaaatcttgaatcatcatataaaatctt	CRISPR spacer
aaaaaatcttgagtcatcatataaaatctt	Protospacer
************.*****************

22. spacer 1.21|559|30|NZ_ALRX01000042|CRISPRCasFinder matches to MK448691 (Streptococcus phage Javan17, complete genome) position: , mismatch: 1, identity: 0.967

aaaaaatcttgaatcatcatataaaatctt	CRISPR spacer
aaaaaatcttgagtcatcatataaaatctt	Protospacer
************.*****************

23. spacer 1.21|559|30|NZ_ALRX01000042|CRISPRCasFinder matches to MK448948 (Streptococcus phage Javan46, complete genome) position: , mismatch: 1, identity: 0.967

aaaaaatcttgaatcatcatataaaatctt	CRISPR spacer
aaaaaatcttgagtcatcatataaaatctt	Protospacer
************.*****************

24. spacer 1.20|493|30|NZ_ALRX01000042|PILER-CR,CRISPRCasFinder matches to MK448971 (Streptococcus phage Javan52, complete genome) position: , mismatch: 2, identity: 0.933

tcctctttctatgtttcaattgccaatttt	CRISPR spacer
tcctctttctgtgtttcagttgccaatttt	Protospacer
**********.*******.***********

25. spacer 1.20|493|30|NZ_ALRX01000042|PILER-CR,CRISPRCasFinder matches to MH853356 (Streptococcus phage LF2, partial genome) position: , mismatch: 2, identity: 0.933

tcctctttctatgtttcaattgccaatttt	CRISPR spacer
tcctctttctgtgtttcagttgccaatttt	Protospacer
**********.*******.***********

26. spacer 1.21|559|30|NZ_ALRX01000042|CRISPRCasFinder matches to MK448673 (Streptococcus phage Javan119, complete genome) position: , mismatch: 2, identity: 0.933

aaaaaatcttgaatcatcatataaaatctt	CRISPR spacer
aaaaaatcttgaatcatcatatacaatttt	Protospacer
*********************** ***.**

27. spacer 1.22|625|30|NZ_ALRX01000042|CRISPRCasFinder matches to MK448395 (Streptococcus satellite phage Javan279, complete genome) position: , mismatch: 2, identity: 0.933

agctatctttttcgtactttgaaatagttt	CRISPR spacer
tgctatctttttcgtactttgcaatagttt	Protospacer
 ******************** ********

28. spacer 1.23|691|30|NZ_ALRX01000042|CRISPRCasFinder matches to NZ_AP018727 (Streptococcus dysgalactiae strain Kdys0611 plasmid pFGCSD1, complete sequence) position: , mismatch: 2, identity: 0.933

tggaaaaagggcaaagtattcttgattata	CRISPR spacer
tagaaaaagggaaaagtattcttgattata	Protospacer
*.********* ******************

29. spacer 1.23|691|30|NZ_ALRX01000042|CRISPRCasFinder matches to NZ_AP018728 (Streptococcus dysgalactiae strain Kdys0611 plasmid pFGCSD2, complete sequence) position: , mismatch: 2, identity: 0.933

tggaaaaagggcaaagtattcttgattata	CRISPR spacer
tagaaaaagggaaaagtattcttgattata	Protospacer
*.********* ******************

30. spacer 1.23|691|30|NZ_ALRX01000042|CRISPRCasFinder matches to NZ_AP018730 (Streptococcus dysgalactiae strain Kdys0611 plasmid pFGCSD4, complete sequence) position: , mismatch: 2, identity: 0.933

tggaaaaagggcaaagtattcttgattata	CRISPR spacer
tagaaaaagggaaaagtattcttgattata	Protospacer
*.********* ******************

31. spacer 1.23|691|30|NZ_ALRX01000042|CRISPRCasFinder matches to NZ_AP018731 (Streptococcus dysgalactiae strain Kdys0611 plasmid pFGCSD5, complete sequence) position: , mismatch: 2, identity: 0.933

tggaaaaagggcaaagtattcttgattata	CRISPR spacer
tagaaaaagggaaaagtattcttgattata	Protospacer
*.********* ******************

32. spacer 1.23|691|30|NZ_ALRX01000042|CRISPRCasFinder matches to MK448662 (Streptococcus satellite phage Javan97, complete genome) position: , mismatch: 2, identity: 0.933

tggaaaaagggcaaagtattcttgattata	CRISPR spacer
tagaaaaagggaaaagtattcttgattata	Protospacer
*.********* ******************

33. spacer 1.25|694|27|NZ_ALRX01000042|PILER-CR matches to NZ_AP018727 (Streptococcus dysgalactiae strain Kdys0611 plasmid pFGCSD1, complete sequence) position: , mismatch: 2, identity: 0.926

ggaaaaagggcaaagtattcttgatta	CRISPR spacer
agaaaaagggaaaagtattcttgatta	Protospacer
.********* ****************

34. spacer 1.25|694|27|NZ_ALRX01000042|PILER-CR matches to NZ_AP018728 (Streptococcus dysgalactiae strain Kdys0611 plasmid pFGCSD2, complete sequence) position: , mismatch: 2, identity: 0.926

ggaaaaagggcaaagtattcttgatta	CRISPR spacer
agaaaaagggaaaagtattcttgatta	Protospacer
.********* ****************

35. spacer 1.25|694|27|NZ_ALRX01000042|PILER-CR matches to NZ_AP018730 (Streptococcus dysgalactiae strain Kdys0611 plasmid pFGCSD4, complete sequence) position: , mismatch: 2, identity: 0.926

ggaaaaagggcaaagtattcttgatta	CRISPR spacer
agaaaaagggaaaagtattcttgatta	Protospacer
.********* ****************

36. spacer 1.25|694|27|NZ_ALRX01000042|PILER-CR matches to NZ_AP018731 (Streptococcus dysgalactiae strain Kdys0611 plasmid pFGCSD5, complete sequence) position: , mismatch: 2, identity: 0.926

ggaaaaagggcaaagtattcttgatta	CRISPR spacer
agaaaaagggaaaagtattcttgatta	Protospacer
.********* ****************

37. spacer 1.25|694|27|NZ_ALRX01000042|PILER-CR matches to MK448662 (Streptococcus satellite phage Javan97, complete genome) position: , mismatch: 2, identity: 0.926

ggaaaaagggcaaagtattcttgatta	CRISPR spacer
agaaaaagggaaaagtattcttgatta	Protospacer
.********* ****************

38. spacer 1.14|97|30|NZ_ALRX01000042|PILER-CR,CRISPRCasFinder matches to MK448851 (Streptococcus phage Javan14, complete genome) position: , mismatch: 3, identity: 0.9

aaactaaagatattgactccctgcaggata	CRISPR spacer
aaaccaaagatattgactccctgcaagaca	Protospacer
****.********************.**.*

39. spacer 1.22|625|30|NZ_ALRX01000042|CRISPRCasFinder matches to MK448559 (Streptococcus satellite phage Javan596, complete genome) position: , mismatch: 3, identity: 0.9

agctatctttttcgtactttgaaatagttt	CRISPR spacer
tactatctttttcgtactttgagatagttt	Protospacer
 .********************.*******

40. spacer 1.22|625|30|NZ_ALRX01000042|CRISPRCasFinder matches to MK448553 (Streptococcus satellite phage Javan588, complete genome) position: , mismatch: 3, identity: 0.9

agctatctttttcgtactttgaaatagttt	CRISPR spacer
tactatctttttcgtactttgagatagttt	Protospacer
 .********************.*******

41. spacer 1.22|625|30|NZ_ALRX01000042|CRISPRCasFinder matches to MK448540 (Streptococcus satellite phage Javan559, complete genome) position: , mismatch: 3, identity: 0.9

agctatctttttcgtactttgaaatagttt	CRISPR spacer
tactatctttttcgtactttgagatagttt	Protospacer
 .********************.*******

42. spacer 1.22|625|30|NZ_ALRX01000042|CRISPRCasFinder matches to MK448550 (Streptococcus satellite phage Javan581, complete genome) position: , mismatch: 3, identity: 0.9

agctatctttttcgtactttgaaatagttt	CRISPR spacer
tactatctttttcgtactttgagatagttt	Protospacer
 .********************.*******

43. spacer 1.22|625|30|NZ_ALRX01000042|CRISPRCasFinder matches to MK448517 (Streptococcus satellite phage Javan495, complete genome) position: , mismatch: 3, identity: 0.9

agctatctttttcgtactttgaaatagttt	CRISPR spacer
tactatctttttcgtactttgagatagttt	Protospacer
 .********************.*******

44. spacer 1.22|625|30|NZ_ALRX01000042|CRISPRCasFinder matches to MK448385 (Streptococcus satellite phage Javan251, complete genome) position: , mismatch: 3, identity: 0.9

agctatctttttcgtactttgaaatagttt	CRISPR spacer
tgctatctttttcgtacttcgagatagttt	Protospacer
 ******************.**.*******

45. spacer 1.2|97|36|NZ_ALRX01000042|CRT matches to MK448971 (Streptococcus phage Javan52, complete genome) position: , mismatch: 4, identity: 0.889

aaactaaagatattgactccctgcaggatagtttta	CRISPR spacer
aaactaaagatattgactccctgcaggatatggttt	Protospacer
******************************   **

46. spacer 1.2|97|36|NZ_ALRX01000042|CRT matches to MK448956 (Streptococcus phage Javan48, complete genome) position: , mismatch: 4, identity: 0.889

aaactaaagatattgactccctgcaggatagtttta	CRISPR spacer
aaactaaagatattgactccctgcaggatatggttt	Protospacer
******************************   **

47. spacer 1.9|559|36|NZ_ALRX01000042|CRT matches to MK448736 (Streptococcus phage Javan35, complete genome) position: , mismatch: 4, identity: 0.889

aaaaaatcttgaatcatcatataaaatcttgtttta	CRISPR spacer
aaaaaatcttgaatcatcatataaaatctttggtaa	Protospacer
******************************   * *

48. spacer 1.9|559|36|NZ_ALRX01000042|CRT matches to MK448781 (Streptococcus phage Javan5, complete genome) position: , mismatch: 4, identity: 0.889

aaaaaatcttgaatcatcatataaaatcttgtttta	CRISPR spacer
aaaaaatcttgaatcatcatataaaatctttggtaa	Protospacer
******************************   * *

49. spacer 1.9|559|36|NZ_ALRX01000042|CRT matches to MK448938 (Streptococcus phage Javan44, complete genome) position: , mismatch: 4, identity: 0.889

aaaaaatcttgaatcatcatataaaatcttgtttta	CRISPR spacer
aaaaaatcttgaatcatcatataaaatctttggtaa	Protospacer
******************************   * *

50. spacer 1.9|559|36|NZ_ALRX01000042|CRT matches to MK448911 (Streptococcus phage Javan34, complete genome) position: , mismatch: 4, identity: 0.889

aaaaaatcttgaatcatcatataaaatcttgtttta	CRISPR spacer
aaaaaatcttgaatcatcatataaaatctttggtaa	Protospacer
******************************   * *

51. spacer 1.9|559|36|NZ_ALRX01000042|CRT matches to MK448916 (Streptococcus phage Javan36, complete genome) position: , mismatch: 4, identity: 0.889

aaaaaatcttgaatcatcatataaaatcttgtttta	CRISPR spacer
aaaaaatcttgaatcatcatataaaatctttggtaa	Protospacer
******************************   * *

52. spacer 1.11|691|36|NZ_ALRX01000042|CRT matches to MK448350 (Streptococcus satellite phage Javan19, complete genome) position: , mismatch: 4, identity: 0.889

tggaaaaagggcaaagtattcttgattatagtttta	CRISPR spacer
tggaaaaagggcaaagtattcttgattatatgggta	Protospacer
******************************    **

53. spacer 1.16|229|30|NZ_ALRX01000042|PILER-CR,CRISPRCasFinder matches to NC_009673 (Bacillus cytotoxicus NVH 391-98 plasmid pBC9801, complete sequence) position: , mismatch: 4, identity: 0.867

tagtagccattattattatggcttttattt	CRISPR spacer
taaaagccattaattttatggcttttattt	Protospacer
**. ******** * ***************

54. spacer 1.18|361|30|NZ_ALRX01000042|PILER-CR,CRISPRCasFinder matches to NZ_CP040345 (Bacillus albus strain DLOU-Yingkou plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.867

aaatgttaatttcatatctacatcttgtat	CRISPR spacer
aaatgttaatttcatatcaacatcttagct	Protospacer
****************** *******.  *

55. spacer 1.22|625|30|NZ_ALRX01000042|CRISPRCasFinder matches to MK448511 (Streptococcus satellite phage Javan473, complete genome) position: , mismatch: 4, identity: 0.867

agctatctttttcgtactttgaaatagttt	CRISPR spacer
tactatctttttcgtactttgagatagtct	Protospacer
 .********************.*****.*

56. spacer 1.22|625|30|NZ_ALRX01000042|CRISPRCasFinder matches to MK448437 (Streptococcus satellite phage Javan334, complete genome) position: , mismatch: 4, identity: 0.867

agctatctttttcgtactttgaaatagttt	CRISPR spacer
tactatctttttcgtactttgcgatagttt	Protospacer
 .******************* .*******

57. spacer 1.22|625|30|NZ_ALRX01000042|CRISPRCasFinder matches to MK448645 (Streptococcus satellite phage Javan757, complete genome) position: , mismatch: 4, identity: 0.867

agctatctttttcgtactttgaaatagttt	CRISPR spacer
tactatctttttcgtactttgagatagtct	Protospacer
 .********************.*****.*

58. spacer 1.22|625|30|NZ_ALRX01000042|CRISPRCasFinder matches to MK448380 (Streptococcus satellite phage Javan24, complete genome) position: , mismatch: 4, identity: 0.867

agctatctttttcgtactttgaaatagttt	CRISPR spacer
tactatctttttcgtactttgagatagtct	Protospacer
 .********************.*****.*

59. spacer 1.22|625|30|NZ_ALRX01000042|CRISPRCasFinder matches to MK448440 (Streptococcus satellite phage Javan338, complete genome) position: , mismatch: 4, identity: 0.867

agctatctttttcgtactttgaaatagttt	CRISPR spacer
tactatctttttcgtactttgcgatagttt	Protospacer
 .******************* .*******

60. spacer 1.8|493|36|NZ_ALRX01000042|CRT matches to MK448837 (Streptococcus phage Javan10, complete genome) position: , mismatch: 5, identity: 0.861

tcctctttctatgtttcaattgccaattttgtttta	CRISPR spacer
tcctctttctatgtttcaattgccaattttcggctt	Protospacer
******************************   .*

61. spacer 1.9|559|36|NZ_ALRX01000042|CRT matches to MK448729 (Streptococcus phage Javan31, complete genome) position: , mismatch: 5, identity: 0.861

aaaaaatcttgaatcatcatataaaatcttgtttta	CRISPR spacer
aaaaaatcttgagtcatcatataaaatctttggtaa	Protospacer
************.*****************   * *

62. spacer 1.9|559|36|NZ_ALRX01000042|CRT matches to MK448691 (Streptococcus phage Javan17, complete genome) position: , mismatch: 5, identity: 0.861

aaaaaatcttgaatcatcatataaaatcttgtttta	CRISPR spacer
aaaaaatcttgagtcatcatataaaatctttggtaa	Protospacer
************.*****************   * *

63. spacer 1.9|559|36|NZ_ALRX01000042|CRT matches to MK448948 (Streptococcus phage Javan46, complete genome) position: , mismatch: 5, identity: 0.861

aaaaaatcttgaatcatcatataaaatcttgtttta	CRISPR spacer
aaaaaatcttgagtcatcatataaaatctttggtaa	Protospacer
************.*****************   * *

64. spacer 1.10|625|36|NZ_ALRX01000042|CRT matches to MK448507 (Streptococcus satellite phage Javan463, complete genome) position: , mismatch: 5, identity: 0.861

agctatctttttcgtactttgaaatagtttgtttta	CRISPR spacer
agctatctttttcgtactttgaaatagtttggggat	Protospacer
*******************************

65. spacer 1.10|625|36|NZ_ALRX01000042|CRT matches to MK448510 (Streptococcus satellite phage Javan469, complete genome) position: , mismatch: 5, identity: 0.861

agctatctttttcgtactttgaaatagtttgtttta	CRISPR spacer
agctatctttttcgtactttgaaatagtttggggat	Protospacer
*******************************

66. spacer 1.10|625|36|NZ_ALRX01000042|CRT matches to MK448521 (Streptococcus satellite phage Javan518, complete genome) position: , mismatch: 5, identity: 0.861

agctatctttttcgtactttgaaatagtttgtttta	CRISPR spacer
agctatctttttcgtactttgaaatagtttggggat	Protospacer
*******************************

67. spacer 1.10|625|36|NZ_ALRX01000042|CRT matches to MK448501 (Streptococcus satellite phage Javan449, complete genome) position: , mismatch: 5, identity: 0.861

agctatctttttcgtactttgaaatagtttgtttta	CRISPR spacer
agctatctttttcgtactttgaaatagtttggggat	Protospacer
*******************************

68. spacer 1.10|625|36|NZ_ALRX01000042|CRT matches to MK448343 (Streptococcus satellite phage Javan162, complete genome) position: , mismatch: 5, identity: 0.861

agctatctttttcgtactttgaaatagtttgtttta	CRISPR spacer
agctatctttttcgtactttgaaatagtttggggat	Protospacer
*******************************

69. spacer 1.10|625|36|NZ_ALRX01000042|CRT matches to MK448329 (Streptococcus satellite phage Javan134, complete genome) position: , mismatch: 5, identity: 0.861

agctatctttttcgtactttgaaatagtttgtttta	CRISPR spacer
agctatctttttcgtactttgaaatagtttggggat	Protospacer
*******************************

70. spacer 1.10|625|36|NZ_ALRX01000042|CRT matches to MK448325 (Streptococcus satellite phage Javan125, complete genome) position: , mismatch: 5, identity: 0.861

agctatctttttcgtactttgaaatagtttgtttta	CRISPR spacer
agctatctttttcgtactttgaaatagtttggggat	Protospacer
*******************************

71. spacer 1.10|625|36|NZ_ALRX01000042|CRT matches to MK448504 (Streptococcus satellite phage Javan455, complete genome) position: , mismatch: 5, identity: 0.861

agctatctttttcgtactttgaaatagtttgtttta	CRISPR spacer
agctatctttttcgtactttgaaatagtttggggat	Protospacer
*******************************

72. spacer 1.10|625|36|NZ_ALRX01000042|CRT matches to MK448516 (Streptococcus satellite phage Javan490, complete genome) position: , mismatch: 5, identity: 0.861

agctatctttttcgtactttgaaatagtttgtttta	CRISPR spacer
agctatctttttcgtactttgaaatagtttggggat	Protospacer
*******************************

73. spacer 1.10|625|36|NZ_ALRX01000042|CRT matches to MK448335 (Streptococcus satellite phage Javan148, complete genome) position: , mismatch: 5, identity: 0.861

agctatctttttcgtactttgaaatagtttgtttta	CRISPR spacer
agctatctttttcgtactttgaaatagtttggggat	Protospacer
*******************************

74. spacer 1.18|361|30|NZ_ALRX01000042|PILER-CR,CRISPRCasFinder matches to NZ_CP040345 (Bacillus albus strain DLOU-Yingkou plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.833

aaatgttaatttcatatctacatcttgtat	CRISPR spacer
aaatgttaatttcatatcaacagttttcat	Protospacer
****************** *** .** .**

75. spacer 1.18|361|30|NZ_ALRX01000042|PILER-CR,CRISPRCasFinder matches to NZ_LR214939 (Mycoplasma salivarium strain NCTC10113 plasmid 2) position: , mismatch: 5, identity: 0.833

aaatgttaatttcatatctacat-cttgtat	CRISPR spacer
aaatgttaattcaatatctacatgaatgta-	Protospacer
***********. **********   ****

76. spacer 1.22|625|30|NZ_ALRX01000042|CRISPRCasFinder matches to MK448616 (Streptococcus satellite phage Javan729, complete genome) position: , mismatch: 5, identity: 0.833

agctatctttttcgtactttgaaatagttt	CRISPR spacer
tactatctttttcgtactttgcgatagtct	Protospacer
 .******************* .*****.*

77. spacer 1.22|625|30|NZ_ALRX01000042|CRISPRCasFinder matches to MK448661 (Streptococcus satellite phage Javan96, complete genome) position: , mismatch: 5, identity: 0.833

agctatctttttcgtactttgaaatagttt	CRISPR spacer
tactatctttttcgtactttgagatggtct	Protospacer
 .********************.**.**.*

78. spacer 1.6|361|36|NZ_ALRX01000042|CRT matches to NZ_CP040345 (Bacillus albus strain DLOU-Yingkou plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.833

aaatgttaatttcatatctacatcttgtatgtttta	CRISPR spacer
aaatgttaatttcatatcaacatcttagctatatta	Protospacer
****************** *******.  *.* ***

79. spacer 1.11|691|36|NZ_ALRX01000042|CRT matches to NZ_AP018727 (Streptococcus dysgalactiae strain Kdys0611 plasmid pFGCSD1, complete sequence) position: , mismatch: 6, identity: 0.833

tggaaaaagggcaaagtattcttgattatagtttta	CRISPR spacer
tagaaaaagggaaaagtattcttgattatatgggta	Protospacer
*.********* ******************    **

80. spacer 1.11|691|36|NZ_ALRX01000042|CRT matches to NZ_AP018728 (Streptococcus dysgalactiae strain Kdys0611 plasmid pFGCSD2, complete sequence) position: , mismatch: 6, identity: 0.833

tggaaaaagggcaaagtattcttgattatagtttta	CRISPR spacer
tagaaaaagggaaaagtattcttgattatatgggta	Protospacer
*.********* ******************    **

81. spacer 1.11|691|36|NZ_ALRX01000042|CRT matches to NZ_AP018730 (Streptococcus dysgalactiae strain Kdys0611 plasmid pFGCSD4, complete sequence) position: , mismatch: 6, identity: 0.833

tggaaaaagggcaaagtattcttgattatagtttta	CRISPR spacer
tagaaaaagggaaaagtattcttgattatatgggta	Protospacer
*.********* ******************    **

82. spacer 1.11|691|36|NZ_ALRX01000042|CRT matches to NZ_AP018731 (Streptococcus dysgalactiae strain Kdys0611 plasmid pFGCSD5, complete sequence) position: , mismatch: 6, identity: 0.833

tggaaaaagggcaaagtattcttgattatagtttta	CRISPR spacer
tagaaaaagggaaaagtattcttgattatatgggta	Protospacer
*.********* ******************    **

83. spacer 1.11|691|36|NZ_ALRX01000042|CRT matches to MK448662 (Streptococcus satellite phage Javan97, complete genome) position: , mismatch: 6, identity: 0.833

tggaaaaagggcaaagtattcttgattatagtttta	CRISPR spacer
tagaaaaagggaaaagtattcttgattatatgggta	Protospacer
*.********* ******************    **

84. spacer 1.18|361|30|NZ_ALRX01000042|PILER-CR,CRISPRCasFinder matches to NZ_CP007625 (Bacillus pseudomycoides strain 219298 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.8

aaatgttaatttcatatctac---atcttgtat	CRISPR spacer
aaatgttaatttcatatcaacagtaactta---	Protospacer
****************** **   * ***.

85. spacer 1.18|361|30|NZ_ALRX01000042|PILER-CR,CRISPRCasFinder matches to NZ_CP009650 (Bacillus pseudomycoides strain BTZ plasmid pBTZ_1, complete sequence) position: , mismatch: 6, identity: 0.8

aaatgttaatttcatatctac---atcttgtat	CRISPR spacer
aaatgttaatttcatatcaacagtaactta---	Protospacer
****************** **   * ***.

86. spacer 1.18|361|30|NZ_ALRX01000042|PILER-CR,CRISPRCasFinder matches to NZ_CP045607 (Bacillus cereus strain SB1 plasmid p1, complete sequence) position: , mismatch: 6, identity: 0.8

aaatgttaatttcatatctacatcttgtat	CRISPR spacer
agatgttaatttcatatcaacatttaagat	Protospacer
*.**************** ****.* . **

87. spacer 1.18|361|30|NZ_ALRX01000042|PILER-CR,CRISPRCasFinder matches to MN693492 (Marine virus AFVG_25M361, complete genome) position: , mismatch: 6, identity: 0.8

aaatgttaatttcatatctacatcttgtat	CRISPR spacer
aaagactaattttatatctacatcttctaa	Protospacer
*** ..******.************* **

88. spacer 1.20|493|30|NZ_ALRX01000042|PILER-CR,CRISPRCasFinder matches to NZ_CP048628 (Megamonas funiformis strain JCM 14723 plasmid putative_Mfuni1, complete sequence) position: , mismatch: 6, identity: 0.8

tcctctttctatgtttcaattgccaatttt	CRISPR spacer
gcctttttctatgtttaaattgcctaatct	Protospacer
 ***.*********** ******* * *.*

89. spacer 1.2|97|36|NZ_ALRX01000042|CRT matches to MK448851 (Streptococcus phage Javan14, complete genome) position: , mismatch: 7, identity: 0.806

aaactaaagatattgactccctgcaggatagtttta	CRISPR spacer
aaaccaaagatattgactccctgcaagacatggttc	Protospacer
****.********************.**.*   **

90. spacer 1.8|493|36|NZ_ALRX01000042|CRT matches to MK448971 (Streptococcus phage Javan52, complete genome) position: , mismatch: 7, identity: 0.806

tcctctttctatgtttcaattgccaattttgtttta	CRISPR spacer
tcctctttctgtgtttcagttgccaattttcggctt	Protospacer
**********.*******.***********   .*

91. spacer 1.8|493|36|NZ_ALRX01000042|CRT matches to MH853356 (Streptococcus phage LF2, partial genome) position: , mismatch: 7, identity: 0.806

tcctctttctatgtttcaattgccaattttgtttta	CRISPR spacer
tcctctttctgtgtttcagttgccaattttcggctt	Protospacer
**********.*******.***********   .*

92. spacer 1.9|559|36|NZ_ALRX01000042|CRT matches to MK448673 (Streptococcus phage Javan119, complete genome) position: , mismatch: 7, identity: 0.806

aaaaaatcttgaatcatcatataaaatcttgtttta	CRISPR spacer
aaaaaatcttgaatcatcatatacaatttttggaaa	Protospacer
*********************** ***.**     *

93. spacer 1.10|625|36|NZ_ALRX01000042|CRT matches to MK448395 (Streptococcus satellite phage Javan279, complete genome) position: , mismatch: 7, identity: 0.806

agctatctttttcgtactttgaaatagtttgtttta	CRISPR spacer
tgctatctttttcgtactttgcaatagtttgaaaat	Protospacer
 ******************** *********

94. spacer 1.14|97|30|NZ_ALRX01000042|PILER-CR,CRISPRCasFinder matches to NZ_CP013553 (Rhizobium phaseoli strain N931 plasmid pRphaN931a, complete sequence) position: , mismatch: 7, identity: 0.767

aaactaaagatattgactccctgcaggata	CRISPR spacer
cgaatgtcgatattgactccgtgcaggata	Protospacer
 .* *.  ************ *********

95. spacer 1.14|97|30|NZ_ALRX01000042|PILER-CR,CRISPRCasFinder matches to NZ_CP013586 (Rhizobium phaseoli strain N161 plasmid pRphaN161a, complete sequence) position: , mismatch: 7, identity: 0.767

aaactaaagatattgactccctgcaggata	CRISPR spacer
cgaatgtcgatattgactccgtgcaggata	Protospacer
 .* *.  ************ *********

96. spacer 1.14|97|30|NZ_ALRX01000042|PILER-CR,CRISPRCasFinder matches to NZ_CP013564 (Rhizobium phaseoli strain N831 plasmid pRphaN831a, complete sequence) position: , mismatch: 7, identity: 0.767

aaactaaagatattgactccctgcaggata	CRISPR spacer
cgaatgtcgatattgactccgtgcaggata	Protospacer
 .* *.  ************ *********

97. spacer 1.15|163|30|NZ_ALRX01000042|PILER-CR,CRISPRCasFinder matches to MN694670 (Marine virus AFVG_250M589, complete genome) position: , mismatch: 7, identity: 0.767

tcttaatttagaaccttttttacttccttt	CRISPR spacer
atattctttagaaccttttttaattccttg	Protospacer
 . *  **************** ******

98. spacer 1.15|163|30|NZ_ALRX01000042|PILER-CR,CRISPRCasFinder matches to HQ634190 (Cyanophage Syn2 genomic sequence) position: , mismatch: 7, identity: 0.767

tcttaatttagaaccttttttacttccttt	CRISPR spacer
acattatttagaacgttttttacgtcctgg	Protospacer
 * * ********* ******** ****

99. spacer 1.15|163|30|NZ_ALRX01000042|PILER-CR,CRISPRCasFinder matches to GU071097 (Synechococcus phage S-SSM5, complete genome) position: , mismatch: 7, identity: 0.767

tcttaatttagaaccttttttacttccttt	CRISPR spacer
acattatttagaacgttttttacgtcctgg	Protospacer
 * * ********* ******** ****

100. spacer 1.15|163|30|NZ_ALRX01000042|PILER-CR,CRISPRCasFinder matches to NC_015286 (Synechococcus phage Syn19, complete genome) position: , mismatch: 7, identity: 0.767

tcttaatttagaaccttttttacttccttt	CRISPR spacer
acattatttagaacgttttttacgtcctgg	Protospacer
 * * ********* ******** ****

101. spacer 1.16|229|30|NZ_ALRX01000042|PILER-CR,CRISPRCasFinder matches to NZ_CP042375 (Leuconostoc carnosum strain CBA3620 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

tagtagccattattattatggcttttattt	CRISPR spacer
ttgtagccatgattattatgggtttggtgg	Protospacer
* ******** ********** *** .*

102. spacer 1.17|295|30|NZ_ALRX01000042|PILER-CR,CRISPRCasFinder matches to NZ_CP013072 (Sphingobium indicum B90A plasmid pSRL2, complete sequence) position: , mismatch: 7, identity: 0.767

ggatgatttcgattatgcggcggtggttga	CRISPR spacer
cgacgatttcgattatgcggcggcattcaa	Protospacer
 **.*******************.. *..*

103. spacer 1.17|295|30|NZ_ALRX01000042|PILER-CR,CRISPRCasFinder matches to NZ_CP005190 (Sphingobium sp. MI1205 plasmid pMI1, complete sequence) position: , mismatch: 7, identity: 0.767

ggatgatttcgattatgcggcggtggttga	CRISPR spacer
cgacgatttcgattatgcggcggccttcaa	Protospacer
 **.*******************.  *..*

104. spacer 1.18|361|30|NZ_ALRX01000042|PILER-CR,CRISPRCasFinder matches to NZ_CP020744 (Bacillus mycoides strain Gnyt1 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

aaatgttaatttcatatctacatcttgtat	CRISPR spacer
aaatgttgatttcatatcaacatttaacag	Protospacer
*******.********** ****.* ..*

105. spacer 1.20|493|30|NZ_ALRX01000042|PILER-CR,CRISPRCasFinder matches to NZ_CP028227 (Lactobacillus plantarum strain SRCM101187 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

tcctctttctatgtttcaattgccaatttt	CRISPR spacer
cattctttctatgtttaatttgccaatata	Protospacer
. .************* * ******** *

106. spacer 1.20|493|30|NZ_ALRX01000042|PILER-CR,CRISPRCasFinder matches to NZ_CP025691 (Lactobacillus plantarum strain IRG1 plasmid pIRG101, complete sequence) position: , mismatch: 7, identity: 0.767

tcctctttctatgtttcaattgccaatttt	CRISPR spacer
cattctttctatgtttaatttgccaatata	Protospacer
. .************* * ******** *

107. spacer 1.20|493|30|NZ_ALRX01000042|PILER-CR,CRISPRCasFinder matches to NZ_CP025691 (Lactobacillus plantarum strain IRG1 plasmid pIRG101, complete sequence) position: , mismatch: 7, identity: 0.767

tcctctttctatgtttcaattgccaatttt	CRISPR spacer
cattctttctatgtttaatttgccaatata	Protospacer
. .************* * ******** *

108. spacer 1.20|493|30|NZ_ALRX01000042|PILER-CR,CRISPRCasFinder matches to NZ_CP021502 (Lactobacillus plantarum strain SRCM102022 plasmid pPL2022-1, complete sequence) position: , mismatch: 7, identity: 0.767

tcctctttctatgtttcaattgccaatttt	CRISPR spacer
cattctttctatgtttaatttgccaatata	Protospacer
. .************* * ******** *

109. spacer 1.20|493|30|NZ_ALRX01000042|PILER-CR,CRISPRCasFinder matches to NZ_CP016271 (Lactobacillus plantarum subsp. plantarum strain CGMCC 1.557 plasmid pLp1, complete sequence) position: , mismatch: 7, identity: 0.767

tcctctttctatgtttcaattgccaatttt	CRISPR spacer
cattctttctatgtttaatttgccaatata	Protospacer
. .************* * ******** *

110. spacer 1.20|493|30|NZ_ALRX01000042|PILER-CR,CRISPRCasFinder matches to NZ_CP024060 (Lactobacillus plantarum strain KACC 92189 plasmid unnamed2) position: , mismatch: 7, identity: 0.767

tcctctttctatgtttcaattgccaatttt	CRISPR spacer
cattctttctatgtttaatttgccaatata	Protospacer
. .************* * ******** *

111. spacer 1.20|493|30|NZ_ALRX01000042|PILER-CR,CRISPRCasFinder matches to NZ_CP032360 (Lactobacillus plantarum strain ZFM55 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

tcctctttctatgtttcaattgccaatttt	CRISPR spacer
cattctttctatgtttaatttgccaatata	Protospacer
. .************* * ******** *

112. spacer 1.20|493|30|NZ_ALRX01000042|PILER-CR,CRISPRCasFinder matches to NZ_CP023303 (Lactobacillus plantarum strain pc-26 plasmid p.pc-2602, complete sequence) position: , mismatch: 7, identity: 0.767

tcctctttctatgtttcaattgccaatttt	CRISPR spacer
cattctttctatgtttaatttgccaatata	Protospacer
. .************* * ******** *

113. spacer 1.20|493|30|NZ_ALRX01000042|PILER-CR,CRISPRCasFinder matches to NZ_CP032643 (Lactobacillus plantarum strain ZFM9 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

tcctctttctatgtttcaattgccaatttt	CRISPR spacer
cattctttctatgtttaatttgccaatata	Protospacer
. .************* * ******** *

114. spacer 1.20|493|30|NZ_ALRX01000042|PILER-CR,CRISPRCasFinder matches to NZ_CP035146 (Lactobacillus plantarum strain SRCM103357 plasmid unnamed3) position: , mismatch: 7, identity: 0.767

tcctctttctatgtttcaattgccaatttt	CRISPR spacer
cattctttctatgtttaatttgccaatata	Protospacer
. .************* * ******** *

115. spacer 1.20|493|30|NZ_ALRX01000042|PILER-CR,CRISPRCasFinder matches to NZ_CP028262 (Lactobacillus plantarum strain SRCM102737 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

tcctctttctatgtttcaattgccaatttt	CRISPR spacer
cattctttctatgtttaatttgccaatata	Protospacer
. .************* * ******** *

116. spacer 1.20|493|30|NZ_ALRX01000042|PILER-CR,CRISPRCasFinder matches to NZ_CP048024 (Lactobacillus plantarum strain CACC 558 plasmid p2CACC558, complete sequence) position: , mismatch: 7, identity: 0.767

tcctctttctatgtttcaattgccaatttt	CRISPR spacer
cattctttctatgtttaatttgccaatata	Protospacer
. .************* * ******** *

117. spacer 1.20|493|30|NZ_ALRX01000042|PILER-CR,CRISPRCasFinder matches to NZ_CP028223 (Lactobacillus plantarum strain SRCM101105 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

tcctctttctatgtttcaattgccaatttt	CRISPR spacer
cattctttctatgtttaatttgccaatata	Protospacer
. .************* * ******** *

118. spacer 1.20|493|30|NZ_ALRX01000042|PILER-CR,CRISPRCasFinder matches to NZ_CP028276 (Lactobacillus plantarum strain SRCM100995 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

tcctctttctatgtttcaattgccaatttt	CRISPR spacer
cattctttctatgtttaatttgccaatata	Protospacer
. .************* * ******** *

119. spacer 1.20|493|30|NZ_ALRX01000042|PILER-CR,CRISPRCasFinder matches to NZ_CP028244 (Lactobacillus plantarum strain SRCM101518 plasmid unnamed3, complete sequence) position: , mismatch: 7, identity: 0.767

tcctctttctatgtttcaattgccaatttt	CRISPR spacer
cattctttctatgtttaatttgccaatata	Protospacer
. .************* * ******** *

120. spacer 1.20|493|30|NZ_ALRX01000042|PILER-CR,CRISPRCasFinder matches to NZ_CP054261 (Lactobacillus plantarum strain TCI507 plasmid unnamed2) position: , mismatch: 7, identity: 0.767

tcctctttctatgtttcaattgccaatttt	CRISPR spacer
cattctttctatgtttaatttgccaatata	Protospacer
. .************* * ******** *

121. spacer 1.21|559|30|NZ_ALRX01000042|CRISPRCasFinder matches to NZ_CP024792 (Nostoc flagelliforme CCNUN1 plasmid pNFSY07, complete sequence) position: , mismatch: 7, identity: 0.767

aaaaaatcttgaatcatcatataaaatctt	CRISPR spacer
ttaatggcttgaaacttcatataaaatctt	Protospacer
  ** . ****** * **************

122. spacer 1.21|559|30|NZ_ALRX01000042|CRISPRCasFinder matches to NC_047733 (Synechococcus phage S-RIM8 isolate RW_22_0300, complete genome) position: , mismatch: 7, identity: 0.767

aaaaaatcttgaatcatcatataaaatctt	CRISPR spacer
aaaaattcttgaatcatcataaactgtttg	Protospacer
***** *************** *  .*.*

123. spacer 1.21|559|30|NZ_ALRX01000042|CRISPRCasFinder matches to JF974289 (Synechococcus phage S-RIM8 A.HR3, complete genome) position: , mismatch: 7, identity: 0.767

aaaaaatcttgaatcatcatataaaatctt	CRISPR spacer
aaaaattcttgaatcatcataaactgtttg	Protospacer
***** *************** *  .*.*

124. spacer 1.21|559|30|NZ_ALRX01000042|CRISPRCasFinder matches to MK493323 (Synechococcus phage S-RIM8 isolate RW_03_0617, complete genome) position: , mismatch: 7, identity: 0.767

aaaaaatcttgaatcatcatataaaatctt	CRISPR spacer
aaaaattcttgaatcatcataaactgtttg	Protospacer
***** *************** *  .*.*

125. spacer 1.21|559|30|NZ_ALRX01000042|CRISPRCasFinder matches to MK493325 (Synechococcus phage S-RIM8 isolate RW_62_0316, complete genome) position: , mismatch: 7, identity: 0.767

aaaaaatcttgaatcatcatataaaatctt	CRISPR spacer
aaaaattcttgaatcatcataaactgtttg	Protospacer
***** *************** *  .*.*

126. spacer 1.21|559|30|NZ_ALRX01000042|CRISPRCasFinder matches to MK493322 (Synechococcus phage S-RIM8 isolate RW_01_0115_WH8101, complete genome) position: , mismatch: 7, identity: 0.767

aaaaaatcttgaatcatcatataaaatctt	CRISPR spacer
aaaaattcttgaatcatcataaactgtttg	Protospacer
***** *************** *  .*.*

127. spacer 1.21|559|30|NZ_ALRX01000042|CRISPRCasFinder matches to KX349288 (Synechococcus phage S-RIM8 isolate RW_08_0711, complete genome) position: , mismatch: 7, identity: 0.767

aaaaaatcttgaatcatcatataaaatctt	CRISPR spacer
aaaaattcttgaatcatcataaactgtttg	Protospacer
***** *************** *  .*.*

128. spacer 1.21|559|30|NZ_ALRX01000042|CRISPRCasFinder matches to NC_020486 (Synechococcus phage S-RIM8 A.HR1, complete genome) position: , mismatch: 7, identity: 0.767

aaaaaatcttgaatcatcatataaaatctt	CRISPR spacer
aaaaattcttgaatcatcataaactgtttg	Protospacer
***** *************** *  .*.*

129. spacer 1.21|559|30|NZ_ALRX01000042|CRISPRCasFinder matches to KX349286 (Synechococcus phage S-RIM8 isolate RW_03_0807_WH8101, complete genome) position: , mismatch: 7, identity: 0.767

aaaaaatcttgaatcatcatataaaatctt	CRISPR spacer
aaaaattcttgaatcatcataaactgtttg	Protospacer
***** *************** *  .*.*

130. spacer 1.21|559|30|NZ_ALRX01000042|CRISPRCasFinder matches to HQ317385 (Synechococcus phage S-RIM8 A.HR5, complete genome) position: , mismatch: 7, identity: 0.767

aaaaaatcttgaatcatcatataaaatctt	CRISPR spacer
aaaaattcttgaatcatcataaactgtttg	Protospacer
***** *************** *  .*.*

131. spacer 1.21|559|30|NZ_ALRX01000042|CRISPRCasFinder matches to MK493324 (Synechococcus phage S-RIM8 isolate RW_22_0214, complete genome) position: , mismatch: 7, identity: 0.767

aaaaaatcttgaatcatcatataaaatctt	CRISPR spacer
aaaaattcttgaatcatcataaactgtttg	Protospacer
***** *************** *  .*.*

132. spacer 1.21|559|30|NZ_ALRX01000042|CRISPRCasFinder matches to KX349290 (Synechococcus phage S-RIM8 isolate RW_25_1112, complete genome) position: , mismatch: 7, identity: 0.767

aaaaaatcttgaatcatcatataaaatctt	CRISPR spacer
aaaaattcttgaatcatcataaactgtttg	Protospacer
***** *************** *  .*.*

133. spacer 1.21|559|30|NZ_ALRX01000042|CRISPRCasFinder matches to KX349285 (Synechococcus phage S-RIM8 isolate RW_01_0212_WH8101, complete genome) position: , mismatch: 7, identity: 0.767

aaaaaatcttgaatcatcatataaaatctt	CRISPR spacer
aaaaattcttgaatcatcataaactgtttg	Protospacer
***** *************** *  .*.*

134. spacer 1.21|559|30|NZ_ALRX01000042|CRISPRCasFinder matches to KX349287 (Synechococcus phage S-RIM8 isolate RW_06_0613, complete genome) position: , mismatch: 7, identity: 0.767

aaaaaatcttgaatcatcatataaaatctt	CRISPR spacer
aaaaattcttgaatcatcataaactgtttg	Protospacer
***** *************** *  .*.*

135. spacer 1.21|559|30|NZ_ALRX01000042|CRISPRCasFinder matches to JF974293 (Cyanophage KBS-M-1A genomic sequence) position: , mismatch: 7, identity: 0.767

aaaaaatcttgaatcatcatataaaatctt	CRISPR spacer
aaaaattcttgaatcatcataaactgtttg	Protospacer
***** *************** *  .*.*

136. spacer 1.10|625|36|NZ_ALRX01000042|CRT matches to MK448559 (Streptococcus satellite phage Javan596, complete genome) position: , mismatch: 8, identity: 0.778

agctatctttttcgtactttgaaatagtttgtttta	CRISPR spacer
tactatctttttcgtactttgagatagtttgaaaat	Protospacer
 .********************.********

137. spacer 1.10|625|36|NZ_ALRX01000042|CRT matches to MK448553 (Streptococcus satellite phage Javan588, complete genome) position: , mismatch: 8, identity: 0.778

agctatctttttcgtactttgaaatagtttgtttta	CRISPR spacer
tactatctttttcgtactttgagatagtttgaaaat	Protospacer
 .********************.********

138. spacer 1.10|625|36|NZ_ALRX01000042|CRT matches to MK448540 (Streptococcus satellite phage Javan559, complete genome) position: , mismatch: 8, identity: 0.778

agctatctttttcgtactttgaaatagtttgtttta	CRISPR spacer
tactatctttttcgtactttgagatagtttgaaaat	Protospacer
 .********************.********

139. spacer 1.10|625|36|NZ_ALRX01000042|CRT matches to MK448550 (Streptococcus satellite phage Javan581, complete genome) position: , mismatch: 8, identity: 0.778

agctatctttttcgtactttgaaatagtttgtttta	CRISPR spacer
tactatctttttcgtactttgagatagtttgaaaat	Protospacer
 .********************.********

140. spacer 1.10|625|36|NZ_ALRX01000042|CRT matches to MK448517 (Streptococcus satellite phage Javan495, complete genome) position: , mismatch: 8, identity: 0.778

agctatctttttcgtactttgaaatagtttgtttta	CRISPR spacer
tactatctttttcgtactttgagatagtttgaaaat	Protospacer
 .********************.********

141. spacer 1.10|625|36|NZ_ALRX01000042|CRT matches to MK448385 (Streptococcus satellite phage Javan251, complete genome) position: , mismatch: 8, identity: 0.778

agctatctttttcgtactttgaaatagtttgtttta	CRISPR spacer
tgctatctttttcgtacttcgagatagtttgaaagt	Protospacer
 ******************.**.********

142. spacer 1.16|229|30|NZ_ALRX01000042|PILER-CR,CRISPRCasFinder matches to NZ_LR214939 (Mycoplasma salivarium strain NCTC10113 plasmid 2) position: , mismatch: 8, identity: 0.733

tagtagccattattattatggcttttattt	CRISPR spacer
cgttcctcattattattatggattttatgt	Protospacer
.. *  .************** ****** *

143. spacer 1.17|295|30|NZ_ALRX01000042|PILER-CR,CRISPRCasFinder matches to NZ_CP022991 (Paraburkholderia aromaticivorans strain BN5 plasmid pBN1, complete sequence) position: , mismatch: 8, identity: 0.733

ggatgatttcgattatgcggcggtggttga	CRISPR spacer
agaacggatcgtttatgcggcggtggttgg	Protospacer
.**  .  *** *****************.

144. spacer 1.18|361|30|NZ_ALRX01000042|PILER-CR,CRISPRCasFinder matches to MN694072 (Marine virus AFVG_250M222, complete genome) position: , mismatch: 8, identity: 0.733

aaatgttaatttcatatctacatcttgtat	CRISPR spacer
gtcaggtaatttaatatctatatcttgtac	Protospacer
.   * ****** *******.********.

145. spacer 1.19|427|30|NZ_ALRX01000042|PILER-CR,CRISPRCasFinder matches to MK288022 (Bacillus phage pW4, complete genome) position: , mismatch: 8, identity: 0.733

tggcgaaaaatggtattatctcaaaggcaa	CRISPR spacer
aaaggtgaaatggtattaactcaaagtcaa	Protospacer
 .. * .*********** ******* ***

146. spacer 1.19|427|30|NZ_ALRX01000042|PILER-CR,CRISPRCasFinder matches to KT070866 (Bacillus phage PBC4, complete genome) position: , mismatch: 8, identity: 0.733

tggcgaaaaatggtattatctcaaaggcaa	CRISPR spacer
aaaggtgaaatggtattaactcaaagtcaa	Protospacer
 .. * .*********** ******* ***

147. spacer 1.20|493|30|NZ_ALRX01000042|PILER-CR,CRISPRCasFinder matches to NZ_CP035159 (Lactobacillus plantarum strain SRCM103362 plasmid unnamed3) position: , mismatch: 8, identity: 0.733

tcctctttctatgtttcaattgccaatttt	CRISPR spacer
cattctttctatgtttaatttgccaataac	Protospacer
. .************* * ********  .

148. spacer 1.21|559|30|NZ_ALRX01000042|CRISPRCasFinder matches to NC_048827 (Vibrio phage vB_VchM_Kuja, complete genome) position: , mismatch: 8, identity: 0.733

aaaaaatcttgaatcatcatataaaatctt	CRISPR spacer
aaaaaatcttgaagaatcatatattgttga	Protospacer
*************  ********  .*.

149. spacer 1.22|625|30|NZ_ALRX01000042|CRISPRCasFinder matches to NZ_MG205641 (Paeniclostridium sordellii strain 7508-A plasmid pCS1-7, complete sequence) position: , mismatch: 8, identity: 0.733

agctatctttttcgtactttgaaatagttt	CRISPR spacer
caagtcctttttcatattttgaaatagttt	Protospacer
 .   .*******.**.*************

150. spacer 1.22|625|30|NZ_ALRX01000042|CRISPRCasFinder matches to NZ_MG205643 (Paeniclostridium sordellii strain S0804018 plasmid pCS1-5, complete sequence) position: , mismatch: 8, identity: 0.733

agctatctttttcgtactttgaaatagttt	CRISPR spacer
caagtcctttttcatattttgaaatagttt	Protospacer
 .   .*******.**.*************

151. spacer 1.22|625|30|NZ_ALRX01000042|CRISPRCasFinder matches to NZ_MG205642 (Paeniclostridium sordellii strain 7543-A plasmid pCS1-6, complete sequence) position: , mismatch: 8, identity: 0.733

agctatctttttcgtactttgaaatagttt	CRISPR spacer
caagtcctttttcatattttgaaatagttt	Protospacer
 .   .*******.**.*************

152. spacer 1.23|691|30|NZ_ALRX01000042|CRISPRCasFinder matches to NC_005250 (Vibrio anguillarum 775 plasmid pJM1, complete sequence) position: , mismatch: 8, identity: 0.733

tggaaaaagggcaaagtattcttgattata	CRISPR spacer
tggaaaaacggcaaagtaatctttgtcgat	Protospacer
******** ********* **** .*..

153. spacer 1.23|691|30|NZ_ALRX01000042|CRISPRCasFinder matches to NZ_CP020532 (Vibrio anguillarum strain 425 plasmid pEIB1, complete sequence) position: , mismatch: 8, identity: 0.733

tggaaaaagggcaaagtattcttgattata	CRISPR spacer
tggaaaaacggcaaagtaatctttgtcgat	Protospacer
******** ********* **** .*..

154. spacer 1.23|691|30|NZ_ALRX01000042|CRISPRCasFinder matches to NZ_LK021128 (Vibrio anguillarum strain NB10 plasmid p67vangNB10, complete sequence) position: , mismatch: 8, identity: 0.733

tggaaaaagggcaaagtattcttgattata	CRISPR spacer
tggaaaaacggcaaagtaatctttgtcgat	Protospacer
******** ********* **** .*..

155. spacer 1.23|691|30|NZ_ALRX01000042|CRISPRCasFinder matches to NC_022225 (Vibrio anguillarum M3 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.733

tggaaaaagggcaaagtattcttgattata	CRISPR spacer
tggaaaaacggcaaagtaatctttgtcgat	Protospacer
******** ********* **** .*..

156. spacer 1.23|691|30|NZ_ALRX01000042|CRISPRCasFinder matches to NZ_CP023210 (Vibrio anguillarum strain ATCC-68554 plasmid p65, complete sequence) position: , mismatch: 8, identity: 0.733

tggaaaaagggcaaagtattcttgattata	CRISPR spacer
tggaaaaacggcaaagtaatctttgtcgat	Protospacer
******** ********* **** .*..

157. spacer 1.10|625|36|NZ_ALRX01000042|CRT matches to MK448511 (Streptococcus satellite phage Javan473, complete genome) position: , mismatch: 9, identity: 0.75

agctatctttttcgtactttgaaatagtttgtttta	CRISPR spacer
tactatctttttcgtactttgagatagtctgaaaat	Protospacer
 .********************.*****.**

158. spacer 1.10|625|36|NZ_ALRX01000042|CRT matches to MK448437 (Streptococcus satellite phage Javan334, complete genome) position: , mismatch: 9, identity: 0.75

agctatctttttcgtactttgaaatagtttgtttta	CRISPR spacer
tactatctttttcgtactttgcgatagtttgaaaac	Protospacer
 .******************* .********

159. spacer 1.10|625|36|NZ_ALRX01000042|CRT matches to MK448645 (Streptococcus satellite phage Javan757, complete genome) position: , mismatch: 9, identity: 0.75

agctatctttttcgtactttgaaatagtttgtttta	CRISPR spacer
tactatctttttcgtactttgagatagtctgaaaat	Protospacer
 .********************.*****.**

160. spacer 1.10|625|36|NZ_ALRX01000042|CRT matches to MK448380 (Streptococcus satellite phage Javan24, complete genome) position: , mismatch: 9, identity: 0.75

agctatctttttcgtactttgaaatagtttgtttta	CRISPR spacer
tactatctttttcgtactttgagatagtctgaaaat	Protospacer
 .********************.*****.**

161. spacer 1.10|625|36|NZ_ALRX01000042|CRT matches to MK448440 (Streptococcus satellite phage Javan338, complete genome) position: , mismatch: 9, identity: 0.75

agctatctttttcgtactttgaaatagtttgtttta	CRISPR spacer
tactatctttttcgtactttgcgatagtttgaaaac	Protospacer
 .******************* .********

162. spacer 1.15|163|30|NZ_ALRX01000042|PILER-CR,CRISPRCasFinder matches to NZ_LR215032 (Mycoplasma gallopavonis strain NCTC10186 plasmid 2) position: , mismatch: 9, identity: 0.7

tcttaatttagaaccttttttacttccttt	CRISPR spacer
tcttaatttagaacctttgtttagggtaat	Protospacer
****************** **     .  *

163. spacer 1.15|163|30|NZ_ALRX01000042|PILER-CR,CRISPRCasFinder matches to MH617331 (Microviridae sp. isolate ctbd619, complete genome) position: , mismatch: 9, identity: 0.7

tcttaatttagaaccttttttacttccttt	CRISPR spacer
gtaaacggcagaaccttttttactaccttt	Protospacer
 .  *   .*************** *****

164. spacer 1.18|361|30|NZ_ALRX01000042|PILER-CR,CRISPRCasFinder matches to MG592576 (Vibrio phage 1.206.O._10N.222.51.B10, partial genome) position: , mismatch: 9, identity: 0.7

aaatgttaatttcatatctacatcttgtat	CRISPR spacer
tcttgttaatttaatatctacaccttaatc	Protospacer
   ********* *********.***.  .

165. spacer 1.6|361|36|NZ_ALRX01000042|CRT matches to MG945789 (UNVERIFIED: Microviridae sp. isolate 4354-1801, complete genome) position: , mismatch: 10, identity: 0.722

aaatgttaatttcatatctacatcttgtatgtttta	CRISPR spacer
tacaatagcattcatatctatatcttttatgtttta	Protospacer
 *  .* .  **********.***** *********

166. spacer 1.10|625|36|NZ_ALRX01000042|CRT matches to NZ_MG205641 (Paeniclostridium sordellii strain 7508-A plasmid pCS1-7, complete sequence) position: , mismatch: 10, identity: 0.722

agctatctttttcgtactttgaaatagtttgtttta	CRISPR spacer
caagtcctttttcatattttgaaatagtttgtttag	Protospacer
 .   .*******.**.***************** .

167. spacer 1.10|625|36|NZ_ALRX01000042|CRT matches to NZ_MG205643 (Paeniclostridium sordellii strain S0804018 plasmid pCS1-5, complete sequence) position: , mismatch: 10, identity: 0.722

agctatctttttcgtactttgaaatagtttgtttta	CRISPR spacer
caagtcctttttcatattttgaaatagtttgtttag	Protospacer
 .   .*******.**.***************** .

168. spacer 1.10|625|36|NZ_ALRX01000042|CRT matches to NZ_MG205642 (Paeniclostridium sordellii strain 7543-A plasmid pCS1-6, complete sequence) position: , mismatch: 10, identity: 0.722

agctatctttttcgtactttgaaatagtttgtttta	CRISPR spacer
caagtcctttttcatattttgaaatagtttgtttag	Protospacer
 .   .*******.**.***************** .

169. spacer 1.22|625|30|NZ_ALRX01000042|CRISPRCasFinder matches to NC_015712 (Clostridium perfringens plasmid pCPPB-1, complete sequence) position: , mismatch: 10, identity: 0.667

agctatctttttcgtactttgaaatagttt	CRISPR spacer
catcgataatttcgtactttgaaatatttt	Protospacer
 .... .  ***************** ***

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

4. NZ_ALRX01000049

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

3865 : 11419

Streptococcus_phage(50.0%)

integrase,transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000353149.1\|3865_4522_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.2e-22	31.8
WP_000594360.1\|4531_5809_-	ABC transporter permease	NA	NA	NA	NA
WP_000508795.1\|6550_6712_+	TM2 domain-containing protein	NA	NA	NA	NA
WP_001867107.1\|6884_7094_-\|transposase	transposase	NA	NA	NA	NA
WP_001865698.1\|7219_7480_-\|transposase	IS3 family transposase	A0A0C5AEA5	Paenibacillus_phage	3.4e-11	43.0
WP_001122304.1\|7501_7702_-\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_000640620.1\|7863_8268_-	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	1.3e-20	43.6
WP_001872365.1\|8267_8534_+	hypothetical protein	Q77YW7	Streptococcus_phage	9.2e-20	65.2
WP_071659971.1\|8536_9151_+\|integrase	site-specific integrase	F8HGP4	Streptococcus_phage	9.2e-55	60.7
WP_001068667.1\|9295_9643_-	50S ribosomal protein L19	NA	NA	NA	NA
WP_000595708.1\|10222_11419_-	voltage-gated chloride channel family protein	A0A1X9I5Z9	Streptococcus_phage	4.6e-103	54.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

5. NZ_ALRX01000048

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_ALRX01000048_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_ALRX01000048_1

1-954

TypeII

II-A

Consensus_repeat	Method
GAACCATTCGAAACAGCACAGCTCTAAAAC	CRT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	PILER-CR
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	CRISPRCasFinder

14 spacers

csn2,cas2,cas1,cas9

The CRISPR arrays of NZ_ALRX01000048_1

>merge|NZ_ALRX01000048|1|1-954|CRT,PILER-CR,CRISPRCasFinder
GAACCATTCGAAACAGCACAGCTCTAAAACTTGCCTTTGAGATAATACCATTTTTCGCCAGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACATATGGAATGATAGCAATTTCGAGGAGGTCGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACATTTCCATAATCAGTCGAAACTGTAATTTGGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACAACATTTAACTCATAACTATCATTTAGAGTGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACTAAGTAACAAGACAGACTTGAAACTGTTAAGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACTTACCGATTAGAACATCATCTAAGGTAATCGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACTATCGCTCAAGCATTCGTATTTGTTTTGGAGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACTACCGCAATAAGATCACCAATGTTGTTTGAGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACGAACAAGATGTAGATATGAAATTAACATTTGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACTACTTTTAGGGTATAGTGTGGACGGTTGGGGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACTAAAAAAGGCAAAATAAAGCATTCTGGCAAGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACACAGACATATTTGTCACTTTATAAAATAATGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACTAAGCTCGAGAGTGTCGCACTAGCCCTATTGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACGTTGGTTAGGTCACACCATAAGATGACAAAGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC

>NZ_ALRX01000048|1|1|1-954|CRT
GAACCATTCGAAACAGCACAGCTCTAAAAC	TTGCCTTTGAGATAATACCATTTTTCGCCAGTTTTG
GAACCATTCGAAACAGCACAGCTCTAAAAC	ATATGGAATGATAGCAATTTCGAGGAGGTCGTTTTG
GAACCATTCGAAACAGCACAGCTCTAAAAC	ATTTCCATAATCAGTCGAAACTGTAATTTGGTTTTG
GAACCATTCGAAACAGCACAGCTCTAAAAC	AACATTTAACTCATAACTATCATTTAGAGTGTTTTG
GAACCATTCGAAACAGCACAGCTCTAAAAC	TAAGTAACAAGACAGACTTGAAACTGTTAAGTTTTG
GAACCATTCGAAACAGCACAGCTCTAAAAC	TTACCGATTAGAACATCATCTAAGGTAATCGTTTTG
GAACCATTCGAAACAGCACAGCTCTAAAAC	TATCGCTCAAGCATTCGTATTTGTTTTGGAGTTTTG
GAACCATTCGAAACAGCACAGCTCTAAAAC	TACCGCAATAAGATCACCAATGTTGTTTGAGTTTTG
GAACCATTCGAAACAGCACAGCTCTAAAAC	GAACAAGATGTAGATATGAAATTAACATTTGTTTTG
GAACCATTCGAAACAGCACAGCTCTAAAAC	TACTTTTAGGGTATAGTGTGGACGGTTGGGGTTTTG
GAACCATTCGAAACAGCACAGCTCTAAAAC	TAAAAAAGGCAAAATAAAGCATTCTGGCAAGTTTTG
GAACCATTCGAAACAGCACAGCTCTAAAAC	ACAGACATATTTGTCACTTTATAAAATAATGTTTTG
GAACCATTCGAAACAGCACAGCTCTAAAAC	TAAGCTCGAGAGTGTCGCACTAGCCCTATTGTTTTG
GAACCATTCGAAACAGCACAGCTCTAAAAC	GTTGGTTAGGTCACACCATAAGATGACAAAGTTTTG
GAACCATTCGAAACAGCACAGCTCTAAAAC

>NZ_ALRX01000048|1|1|61-954|PILER-CR
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	ATATGGAATGATAGCAATTTCGAGGAGGTC
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	ATTTCCATAATCAGTCGAAACTGTAATTTG
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	AACATTTAACTCATAACTATCATTTAGAGT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TAAGTAACAAGACAGACTTGAAACTGTTAA
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TTACCGATTAGAACATCATCTAAGGTAATC
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TATCGCTCAAGCATTCGTATTTGTTTTGGA
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TACCGCAATAAGATCACCAATGTTGTTTGA
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	GAACAAGATGTAGATATGAAATTAACATTT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TACTTTTAGGGTATAGTGTGGACGGTTGGG
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TAAAAAAGGCAAAATAAAGCATTCTGGCAA
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	ACAGACATATTTGTCACTTTATAAAATAAT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TAAGCTCGAGAGTGTCGCACTAGCCCTATT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	GTTGGTTAGGTCACACCATAAGATGACAAA
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC

>NZ_ALRX01000048|1|1|61-954|CRISPRCasFinder
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	ATATGGAATGATAGCAATTTCGAGGAGGTC
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	ATTTCCATAATCAGTCGAAACTGTAATTTG
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	AACATTTAACTCATAACTATCATTTAGAGT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TAAGTAACAAGACAGACTTGAAACTGTTAA
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TTACCGATTAGAACATCATCTAAGGTAATC
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TATCGCTCAAGCATTCGTATTTGTTTTGGA
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TACCGCAATAAGATCACCAATGTTGTTTGA
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	GAACAAGATGTAGATATGAAATTAACATTT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TACTTTTAGGGTATAGTGTGGACGGTTGGG
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TAAAAAAGGCAAAATAAAGCATTCTGGCAA
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	ACAGACATATTTGTCACTTTATAAAATAAT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TAAGCTCGAGAGTGTCGCACTAGCCCTATT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	GTTGGTTAGGTCACACCATAAGATGACAAA
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_ALRX01000048.1\|WP_000323544.1\|8061_8832_-\|TIGR01457-family-HAD-type-hydrolase	unknown	unknown	gnl\|CDD\|319832
NZ_ALRX01000048.1\|WP_001241816.1\|10795_11176_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|131381
NZ_ALRX01000048.1\|WP_000914664.1\|9573_10704_-\|oxygen-independent-coproporphyrinogen-III-oxidase	unknown	unknown	gnl\|CDD\|236309
NZ_ALRX01000048.1\|WP_000653357.1\|7415_8072_-\|TIGR01906-family-membrane-protein	unknown	unknown	gnl\|CDD\|226884
NZ_ALRX01000048.1\|WP_001040087.1\|2915_7028_-\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	COG3513_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|273840
NZ_ALRX01000048.1\|WP_000122194.1\|1706_2048_-\|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226043
NZ_ALRX01000048.1\|WP_000590706.1\|1054_1720_-\|type-II-A-CRISPR-associated-protein-Csn2	csn2	pfam09711_csn2_CAS-II-A	gnl\|CDD\|213408
NZ_ALRX01000048.1\|WP_000929489.1\|2044_2914_-\|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|274694
NZ_ALRX01000048.1\|WP_000159234.1\|11200_11572_-\|YbgA-family-protein	unknown	unknown	gnl\|CDD\|377982
NZ_ALRX01000048.1\|WP_000523795.1\|8832_9570_-\|acyl-ACP-thioesterase	unknown	unknown	gnl\|CDD\|366738

Protein	Function_ID	Function_description	E-value
NZ_ALRX01000048.1\|WP_000323544.1\|8061_8832_-\|TIGR01457-family-HAD-type-hydrolase	gnl\|CDD\|319832	cd07530, HAD_Pase_UmpH-like, UmpH/NagD family phosphatase, similar to Escherichia coli UmpH UMP phosphatase/NagD nucleotide phosphatase and Mycobacterium tuberculosis Rv1692 glycerol 3-phosphate phosphatase. Escherichia coli UmpH/NagD is a ribonucleoside tri-, di-, and monophosphatase with a preference for purines, it shows peak activity with UMP and functions in UMP-degradation. It is also an effective phosphatase with AMP, GMP and CMP. Mycobacterium tuberculosis phosphatase, Rv1692 is a glycerol 3-phosphate phosphatase. Rv1692 is the final enzyme involved in glycerophospholipid recycling/catabolism. This subfamily belongs to the UmpH/NagD phosphatase family, and to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	1.19143e-132
NZ_ALRX01000048.1\|WP_001241816.1\|10795_11176_-\|hypothetical-protein	gnl\|CDD\|131381	TIGR02328, TIGR02328, conserved hypothetical protein. Members of this protein are found in a small number of taxonomically well separated species, yet are strongly conserved, suggesting lateral gene transfer. Members are found in Treponema denticola, Clostridium acetobutylicum, and several of the Firmicutes. The function of this protein is unknown. [Hypothetical proteins, Conserved].	6.45558e-80
NZ_ALRX01000048.1\|WP_000914664.1\|9573_10704_-\|oxygen-independent-coproporphyrinogen-III-oxidase	gnl\|CDD\|236309	PRK08599, PRK08599, oxygen-independent coproporphyrinogen III oxidase.	0
NZ_ALRX01000048.1\|WP_000653357.1\|7415_8072_-\|TIGR01906-family-membrane-protein	gnl\|CDD\|226884	COG4478, COG4478, Predicted membrane protein [Function unknown].	9.75792e-52
NZ_ALRX01000048.1\|WP_001040087.1\|2915_7028_-\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	gnl\|CDD\|273840	TIGR01865, conserved_hypothetical_protein, CRISPR subtype II/NMENI RNA-guided endonuclease Cas9/Csn1. CRISPR loci appear to be mobile elements with a wide host range. This model represents a protein found only in CRISPR-containing species, near other CRISPR-associated proteins (cas), as part of the NMENI subtype of CRISPR/Cas locus. The species range so far for this protein is animal pathogens and commensals only.	0
NZ_ALRX01000048.1\|WP_000122194.1\|1706_2048_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	2.38084e-52
NZ_ALRX01000048.1\|WP_000590706.1\|1054_1720_-\|type-II-A-CRISPR-associated-protein-Csn2	gnl\|CDD\|213408	cd09758, Csn2, CRISPR/Cas system-associated protein Csn2. Csn2 is a Nmeni subtype-specific Cas protein, which may function in the adaptation process which mediates the incorporation of foreign nucleic acids into the microbial host genome. Csn 2 may interact directly with double-stranded DNA. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA. Csn2 has been predicted to be a functional analog of Cas4 based on anti-correlated phyletic patterns; also known as SPy1049 family.	3.61399e-122
NZ_ALRX01000048.1\|WP_000929489.1\|2044_2914_-\|type-II-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274694	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is a prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 variant of the NMENI subtype of CRISPR/Cas system.	2.54315e-139
NZ_ALRX01000048.1\|WP_000159234.1\|11200_11572_-\|YbgA-family-protein	gnl\|CDD\|377982	pfam08349, DUF1722, Protein of unknown function (DUF1722). This domain of unknown function is found in bacteria and archaea and is homologous to the hypothetical protein ybgA from E. coli.	6.08694e-28
NZ_ALRX01000048.1\|WP_000523795.1\|8832_9570_-\|acyl-ACP-thioesterase	gnl\|CDD\|366738	pfam01643, Acyl-ACP_TE, Acyl-ACP thioesterase. This family consists of various acyl-acyl carrier protein (ACP) thioesterases (TE) these terminate fatty acyl group extension via hydrolysing an acyl group on a fatty acid.	3.68196e-111

>NZ_ALRX01000048.1|WP_000590706.1|1054_1720_-|type-II-A-CRISPR-associated-protein-Csn2
MIKINFPILDEPLVLSNATILTIEDVSVYSSLVKHFYQYDVDEHLKLFDDKQKSLKATELMLVTDILGYDVNSAPILKLIHGDLENQFNEKPEVKSMVEKLAATITELIAFECLENELDLEYDEITILELIKALGVKIETQSDTIFEKCFEIIQVYHYLTKKNLLVFVNSGAYLTKDEVIKLCEYINLMQKSVLFLEPRRLYDLPQYVIDKDYFLIGENMV
>NZ_ALRX01000048.1|WP_000122194.1|1706_2048_-|CRISPR-associated-endonuclease-Cas2
MSYRYMRMILMFDMPTETAEERKAYRKFRKFLLSEGFIMHQFSVYSKLLLNNTANNAMIGRLKVNNPKKGNITLLTVTEKQFARMVYLHGERNTSVANSDSRLVFLGDSYDQD
>NZ_ALRX01000048.1|WP_000929489.1|2044_2914_-|type-II-CRISPR-associated-endonuclease-Cas1
MAGWRTVVVNTHSKLSYKNNHLIFKDSYQTEMIHLSEIDILIMETTDIVLSTMLIKRLVDENILVIFCDDKRLPTAMLMPYYARHDSSLQLSRQMSWIEDVKADVWTSIIAQKILNQSFYLGECSFFEKSQSIMNLYHDLEPFDPSNREGHAARIYFNTLFGNDFSREQDNPINAGLDYGYSLLLSMFAREVVKCGCMTQFGLKHANQFNQFNLASDIMEPFRPIVDRIIYENRQSDFVKMKRELFSMFSETYSYNGKEMYLSNIVSDYTKKVIKSLNSDGNGIPEFRI
>NZ_ALRX01000048.1|WP_001040087.1|2915_7028_-|type-II-CRISPR-RNA-guided-endonuclease-Cas9
MNKPYSIGLDIGTNSVGWSIITDDYKVPAKKMRVLGNTDKEYIKKNLIGALLFDGGNTAADRRLKRTARRRYTRRRNRILYLQEIFAEEMSKVDDSFFHRLEDSFLVEEDKRGSKYPIFATLQEEKDYHEKFSTIYHLRKELADKKEKADLRLIYIALAHIIKFRGHFLIEDDSFDVRNTDISKQYQDFLEIFNTTFENNDLLSQNVDVEAILTDKISKSAKKDRILAQYPNQKSTGIFAEFLKLIVGNQADFKKYFNLEDKTPLQFAKDSYDEDLENLLGQIGDEFADLFSAAKKLYDSVLLSGILTVIDLSTKAPLSASMIQRYDEHREDLKQLKQFVKASLPEKYQEIFADSSKDGYAGYIEGKTNQEAFYKYLSKLLTKQEDSENFLEKIKNEDFLRKQRTFDNGSIPHQVHLTELKAIIRRQSEYYPFLKENQDRIEKILTFRIPYYIGPLAREKSDFAWMTRKTDDSIRPWNFEDLVDKEKSAEAFIHRMTNNDFYLPEEKVLPKHSLIYEKFTVYNELTKVRYKNEQGETYFFDSNIKQEIFDGVFKEHRKVSKKKLLDFLAKEYEEFRIVDVIGLDKENKAFNASLGTYHDLEKILDKDFLDNPDNESILEDIVQTLTLFEDREMIKKRLENYKDLFTESQLKKLYRRHYTGWGRLSAKLINGIRDKESQKTILDYLIDDGRSNRNFMQLINDDGLSFKSIISKAQAGSHSDNLKEVVGELAGSPAIKKGILQSLKIVDELVKVMGYEPEQIVVEMARENQTTNQGRRNSRQRYKLLDDGVKNLASDLNGNILKEYPTDNQALQNERLFLYYLQNGRDMYTGEALDIDNLSQYDIDHIIPQAFIKDDSIDNRVLVSSAKNRGKSDDVPSLEIVKDCKVFWKKLLDAKLMSQRKYDNLTKAERGGLTSDDKARFIQRQLVETRQITKHVARILDERFNNELDSKGRRIRKVKIVTLKSNLVSNFRKEFGFYKIREVNNYHHAHDAYLNAVVAKAILTKYPQLEPEFVYGDYPKYNSYKTRKSATEKLFFYSNIMNFFKTKVTLADGTVVVKDDIEVNNDTGEIVWDKKKHFATVRKVLSYPQNNIVKKTEIQTGGFSKESILAHGNSDKLIPRKTKDIYLDPKKYGGFDSPIVAYSVLVVADIKKGKAQKLKTVTELLGITIMERSRFEKNPSAFLESKGYLNIRADKLIILPKYSLFELENGRRRLLASAGELQKGNELALPTQFMKFLYLASRYNESKGKPEEIEKKQEFVNQHVSYFDDILQLINDFSKRVILADANLEKINKLYQDNKENISVDELANNIINLFTFTSLGAPAAFKFFDKIVDRKRYTSTKEVLNSTLIHQSITGLYETRIDLGKLGED
>NZ_ALRX01000048.1|WP_000653357.1|7415_8072_-|TIGR01906-family-membrane-protein
MKDKLLVVLTWIWIISLATLATIYIAWLIYPIEIQFLKLEKVVYLKAETIYYNFNKLMIYLTHPFISDLNMPSFPSSEDGLKHFADVKYLFTLAHGLFVILTFPVIYFLRRGWKQKSIFLYEGFFKIAIMLPIFIVVCAFLLGFDQFFTLFHEVLFPGDSTWQFNPLTDPVIWILPETFFLHCFIIFLLIYETITIILLIIGRKHLKLRKYKNKMQAL
>NZ_ALRX01000048.1|WP_000323544.1|8061_8832_-|TIGR01457-family-HAD-type-hydrolase
MAYKGYLIDLDGTIYKGKSRIPAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVETPLETIYTATMATVDYMNDMNRGKTAYVIGEEGLKKAIADAGYVEDTKNPAYVVVGLDWNVTYDKLATATLAIQNGALFIGTNPDLNIPTERGLLPGAGSLNALLEAATRIKPVFIGKPNAIIMNKALEILNIPRNQAVMVGDNYLTDIMAGINNDIDTLLVTTGFTTVEEVPDLPIQPSYVLASLDEWTFNEG
>NZ_ALRX01000048.1|WP_000523795.1|8832_9570_-|acyl-ACP-thioesterase
MGLLYRETYEVPFYESDTNHYMKLPQLLALALQISAKQSLKLGIGDDIVFKRYGLVWVVTDYIIDIERLPKHAEKIVIETEAKAHNKLLCYRYFYIYGEDGQKIITISSAFVLMDFKTRKIHPVLDDITSIYQSQRIKKVIRGPKYHPIGDSKVKQYHVRYFDLDMNGHVNNSKYLEWMYDVLDLDFLSSHIPKKIDLKYIKEIQYGTDIKSHWYQDGLVTRHDIIGGDAIHAQARIEWQEKKED
>NZ_ALRX01000048.1|WP_000914664.1|9573_10704_-|oxygen-independent-coproporphyrinogen-III-oxidase
MLKKPTSAYVHIPFCTQICYYCDFSKVFIKNQPVDAYLQALIREFRSYDITELRTLYIGGGTPTSISAVQLDYLLTELSRDLNLNTLEEFTIEANPGDLTVDKIEVLQKSAVNRVSLGVQTFNDKHLKRIGRSHNEAQIYSTIDALKTAGFQNISIDLIYALPGQTMDDVRSNVAKALSLNIPHLSLYSLILEHHTVFMNKMRRGKLHLPTEDLEAEMFEYIISEMERNGFEHYEISNFTKPGFESRHNLMYWDNVEYYGVGAGASGYLDGIRYRNRGPIQHYLKGVSEGNARLSEEVLSKNEMMEEELFLGLRKKEGVSIGKFEQKFGTSFEKRYGQIVQELQSDGLLKENNGFIQMTKKGLFLGDTVAEKFIVE
>NZ_ALRX01000048.1|WP_001241816.1|10795_11176_-|hypothetical-protein
MRLWHQDIIELLPRQQLLGQHRECCALRGNGWGRKHETVDYVFRYSPYRLFAYHQLVMEEMMERGYRVSKEWLIAEYRGMKCPRYDTLNPVDLETPIYPEHNQDYLQECLWNLKAKGIDLPINKIK
>NZ_ALRX01000048.1|WP_000159234.1|11200_11572_-|YbgA-family-protein
MTKEAELLWAKHKYLVLSKSQKIYLDIRQTLKSPNCTVLDVQSLIDQAVLLEESPSQVTNAYMHIWGYFKNKAERQEKEEFLTLLEKYRKTGYQRRKLLAFLKQLLAKYPNSYLQNSSIFEEE

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_ALRX01000048_1	1.20\|427\|30\|NZ_ALRX01000048\|PILER-CR,CRISPRCasFinder	427-456	30	MK448729	Streptococcus phage Javan31, complete genome	10214-10243	0	1.0
NZ_ALRX01000048_1	1.20\|427\|30\|NZ_ALRX01000048\|PILER-CR,CRISPRCasFinder	427-456	30	MK448691	Streptococcus phage Javan17, complete genome	10214-10243	0	1.0
NZ_ALRX01000048_1	1.20\|427\|30\|NZ_ALRX01000048\|PILER-CR,CRISPRCasFinder	427-456	30	MK448948	Streptococcus phage Javan46, complete genome	10214-10243	0	1.0
NZ_ALRX01000048_1	1.20\|427\|30\|NZ_ALRX01000048\|PILER-CR,CRISPRCasFinder	427-456	30	MK448768	Streptococcus phage Javan47, complete genome	11359-11388	0	1.0
NZ_ALRX01000048_1	1.21\|493\|30\|NZ_ALRX01000048\|PILER-CR,CRISPRCasFinder	493-522	30	MK448708	Streptococcus phage Javan23, complete genome	17274-17303	1	0.967
NZ_ALRX01000048_1	1.21\|493\|30\|NZ_ALRX01000048\|PILER-CR,CRISPRCasFinder	493-522	30	MK448897	Streptococcus phage Javan28, complete genome	17274-17303	1	0.967
NZ_ALRX01000048_1	1.24\|691\|30\|NZ_ALRX01000048\|PILER-CR,CRISPRCasFinder	691-720	30	JX409894	Streptococcus phage LYGO9, complete genome	28291-28320	1	0.967
NZ_ALRX01000048_1	1.24\|691\|30\|NZ_ALRX01000048\|PILER-CR,CRISPRCasFinder	691-720	30	JX409895	Streptococcus phage JX01, complete genome	40138-40167	1	0.967
NZ_ALRX01000048_1	1.7\|427\|36\|NZ_ALRX01000048\|CRT	427-462	36	MK448729	Streptococcus phage Javan31, complete genome	10208-10243	2	0.944
NZ_ALRX01000048_1	1.7\|427\|36\|NZ_ALRX01000048\|CRT	427-462	36	MK448691	Streptococcus phage Javan17, complete genome	10208-10243	2	0.944
NZ_ALRX01000048_1	1.7\|427\|36\|NZ_ALRX01000048\|CRT	427-462	36	MK448948	Streptococcus phage Javan46, complete genome	10208-10243	2	0.944
NZ_ALRX01000048_1	1.7\|427\|36\|NZ_ALRX01000048\|CRT	427-462	36	MK448768	Streptococcus phage Javan47, complete genome	11353-11388	2	0.944
NZ_ALRX01000048_1	1.24\|691\|30\|NZ_ALRX01000048\|PILER-CR,CRISPRCasFinder	691-720	30	MK448761	Streptococcus phage Javan445, complete genome	20710-20739	2	0.933
NZ_ALRX01000048_1	1.24\|691\|30\|NZ_ALRX01000048\|PILER-CR,CRISPRCasFinder	691-720	30	MK448760	Streptococcus phage Javan443, complete genome	20710-20739	2	0.933
NZ_ALRX01000048_1	1.24\|691\|30\|NZ_ALRX01000048\|PILER-CR,CRISPRCasFinder	691-720	30	MK448675	Streptococcus phage Javan129, complete genome	20835-20864	3	0.9
NZ_ALRX01000048_1	1.24\|691\|30\|NZ_ALRX01000048\|PILER-CR,CRISPRCasFinder	691-720	30	MK448973	Streptococcus phage Javan522, complete genome	20036-20065	3	0.9
NZ_ALRX01000048_1	1.24\|691\|30\|NZ_ALRX01000048\|PILER-CR,CRISPRCasFinder	691-720	30	NC_004585	Streptococcus prophage 315.2, complete genome	19207-19236	3	0.9
NZ_ALRX01000048_1	1.24\|691\|30\|NZ_ALRX01000048\|PILER-CR,CRISPRCasFinder	691-720	30	MK448749	Streptococcus phage Javan39, complete genome	20370-20399	3	0.9
NZ_ALRX01000048_1	1.24\|691\|30\|NZ_ALRX01000048\|PILER-CR,CRISPRCasFinder	691-720	30	MK448955	Streptococcus phage Javan478, complete genome	21413-21442	3	0.9
NZ_ALRX01000048_1	1.24\|691\|30\|NZ_ALRX01000048\|PILER-CR,CRISPRCasFinder	691-720	30	MK448966	Streptococcus phage Javan508, complete genome	19062-19091	3	0.9
NZ_ALRX01000048_1	1.24\|691\|30\|NZ_ALRX01000048\|PILER-CR,CRISPRCasFinder	691-720	30	MK448859	Streptococcus phage Javan170, complete genome	20585-20614	3	0.9
NZ_ALRX01000048_1	1.24\|691\|30\|NZ_ALRX01000048\|PILER-CR,CRISPRCasFinder	691-720	30	MK448690	Streptococcus phage Javan169, complete genome	20943-20972	3	0.9
NZ_ALRX01000048_1	1.24\|691\|30\|NZ_ALRX01000048\|PILER-CR,CRISPRCasFinder	691-720	30	MK448772	Streptococcus phage Javan483, complete genome	19076-19105	3	0.9
NZ_ALRX01000048_1	1.24\|691\|30\|NZ_ALRX01000048\|PILER-CR,CRISPRCasFinder	691-720	30	MK448778	Streptococcus phage Javan493, complete genome	19578-19607	3	0.9
NZ_ALRX01000048_1	1.24\|691\|30\|NZ_ALRX01000048\|PILER-CR,CRISPRCasFinder	691-720	30	MK448962	Streptococcus phage Javan496, complete genome	9569-9598	3	0.9
NZ_ALRX01000048_1	1.24\|691\|30\|NZ_ALRX01000048\|PILER-CR,CRISPRCasFinder	691-720	30	MH853356	Streptococcus phage LF2, partial genome	42651-42680	3	0.9
NZ_ALRX01000048_1	1.24\|691\|30\|NZ_ALRX01000048\|PILER-CR,CRISPRCasFinder	691-720	30	MK448850	Streptococcus phage Javan132, complete genome	20172-20201	3	0.9
NZ_ALRX01000048_1	1.24\|691\|30\|NZ_ALRX01000048\|PILER-CR,CRISPRCasFinder	691-720	30	MK448676	Streptococcus phage Javan131, complete genome	23095-23124	3	0.9
NZ_ALRX01000048_1	1.24\|691\|30\|NZ_ALRX01000048\|PILER-CR,CRISPRCasFinder	691-720	30	MK448975	Streptococcus phage Javan526, complete genome	20360-20389	3	0.9
NZ_ALRX01000048_1	1.24\|691\|30\|NZ_ALRX01000048\|PILER-CR,CRISPRCasFinder	691-720	30	MK448688	Streptococcus phage Javan161, complete genome	20538-20567	3	0.9
NZ_ALRX01000048_1	1.24\|691\|30\|NZ_ALRX01000048\|PILER-CR,CRISPRCasFinder	691-720	30	MK448995	Streptococcus phage Javan626, complete genome	20462-20491	3	0.9
NZ_ALRX01000048_1	1.24\|691\|30\|NZ_ALRX01000048\|PILER-CR,CRISPRCasFinder	691-720	30	MK448782	Streptococcus phage Javan501, complete genome	22718-22747	3	0.9
NZ_ALRX01000048_1	1.8\|493\|36\|NZ_ALRX01000048\|CRT	493-528	36	MK448708	Streptococcus phage Javan23, complete genome	17268-17303	4	0.889
NZ_ALRX01000048_1	1.8\|493\|36\|NZ_ALRX01000048\|CRT	493-528	36	MK448897	Streptococcus phage Javan28, complete genome	17268-17303	4	0.889
NZ_ALRX01000048_1	1.22\|559\|30\|NZ_ALRX01000048\|PILER-CR,CRISPRCasFinder	559-588	30	NZ_CP040345	Bacillus albus strain DLOU-Yingkou plasmid unnamed1, complete sequence	474277-474306	5	0.833
NZ_ALRX01000048_1	1.11\|691\|36\|NZ_ALRX01000048\|CRT	691-726	36	JX409894	Streptococcus phage LYGO9, complete genome	28285-28320	6	0.833
NZ_ALRX01000048_1	1.11\|691\|36\|NZ_ALRX01000048\|CRT	691-726	36	JX409895	Streptococcus phage JX01, complete genome	40132-40167	6	0.833
NZ_ALRX01000048_1	1.16\|163\|30\|NZ_ALRX01000048\|PILER-CR,CRISPRCasFinder	163-192	30	AP014352	Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S39-C33, * SEQUENCING IN PROGRESS *	25577-25606	6	0.8
NZ_ALRX01000048_1	1.24\|691\|30\|NZ_ALRX01000048\|PILER-CR,CRISPRCasFinder	691-720	30	NZ_MG205641	Paeniclostridium sordellii strain 7508-A plasmid pCS1-7, complete sequence	81513-81542	6	0.8
NZ_ALRX01000048_1	1.24\|691\|30\|NZ_ALRX01000048\|PILER-CR,CRISPRCasFinder	691-720	30	NZ_MG205642	Paeniclostridium sordellii strain 7543-A plasmid pCS1-6, complete sequence	81513-81542	6	0.8
NZ_ALRX01000048_1	1.24\|691\|30\|NZ_ALRX01000048\|PILER-CR,CRISPRCasFinder	691-720	30	AF424781	Staphylococcus aureus phage phi 11, complete genome	43535-43564	6	0.8
NZ_ALRX01000048_1	1.24\|691\|30\|NZ_ALRX01000048\|PILER-CR,CRISPRCasFinder	691-720	30	NC_004615	Staphylococcus phage 11, complete genome	43535-43564	6	0.8
NZ_ALRX01000048_1	1.24\|691\|30\|NZ_ALRX01000048\|PILER-CR,CRISPRCasFinder	691-720	30	NC_007063	Staphylococcus phage 88, complete genome	26683-26712	6	0.8
NZ_ALRX01000048_1	1.24\|691\|30\|NZ_ALRX01000048\|PILER-CR,CRISPRCasFinder	691-720	30	AY954966	Bacteriophage 88, complete genome	26683-26712	6	0.8
NZ_ALRX01000048_1	1.24\|691\|30\|NZ_ALRX01000048\|PILER-CR,CRISPRCasFinder	691-720	30	M34832	Bacteriophage phi-11 integrase (int) and excisionase (xis) genes, complete cds	1559-1588	6	0.8
NZ_ALRX01000048_1	1.24\|691\|30\|NZ_ALRX01000048\|PILER-CR,CRISPRCasFinder	691-720	30	MN904510	Staphylococcus phage vB_SauS-SAP27, complete genome	21975-22004	6	0.8
NZ_ALRX01000048_1	1.11\|691\|36\|NZ_ALRX01000048\|CRT	691-726	36	MK448761	Streptococcus phage Javan445, complete genome	20710-20745	7	0.806
NZ_ALRX01000048_1	1.11\|691\|36\|NZ_ALRX01000048\|CRT	691-726	36	MK448760	Streptococcus phage Javan443, complete genome	20710-20745	7	0.806
NZ_ALRX01000048_1	1.11\|691\|36\|NZ_ALRX01000048\|CRT	691-726	36	MK448973	Streptococcus phage Javan522, complete genome	20036-20071	7	0.806
NZ_ALRX01000048_1	1.11\|691\|36\|NZ_ALRX01000048\|CRT	691-726	36	MK448749	Streptococcus phage Javan39, complete genome	20370-20405	7	0.806
NZ_ALRX01000048_1	1.11\|691\|36\|NZ_ALRX01000048\|CRT	691-726	36	MK448955	Streptococcus phage Javan478, complete genome	21413-21448	7	0.806
NZ_ALRX01000048_1	1.11\|691\|36\|NZ_ALRX01000048\|CRT	691-726	36	MK448859	Streptococcus phage Javan170, complete genome	20585-20620	7	0.806
NZ_ALRX01000048_1	1.11\|691\|36\|NZ_ALRX01000048\|CRT	691-726	36	MK448690	Streptococcus phage Javan169, complete genome	20943-20978	7	0.806
NZ_ALRX01000048_1	1.11\|691\|36\|NZ_ALRX01000048\|CRT	691-726	36	MK448778	Streptococcus phage Javan493, complete genome	19578-19613	7	0.806
NZ_ALRX01000048_1	1.11\|691\|36\|NZ_ALRX01000048\|CRT	691-726	36	MK448962	Streptococcus phage Javan496, complete genome	9569-9604	7	0.806
NZ_ALRX01000048_1	1.11\|691\|36\|NZ_ALRX01000048\|CRT	691-726	36	MK448850	Streptococcus phage Javan132, complete genome	20172-20207	7	0.806
NZ_ALRX01000048_1	1.11\|691\|36\|NZ_ALRX01000048\|CRT	691-726	36	MK448676	Streptococcus phage Javan131, complete genome	23095-23130	7	0.806
NZ_ALRX01000048_1	1.11\|691\|36\|NZ_ALRX01000048\|CRT	691-726	36	MK448975	Streptococcus phage Javan526, complete genome	20360-20395	7	0.806
NZ_ALRX01000048_1	1.11\|691\|36\|NZ_ALRX01000048\|CRT	691-726	36	MK448688	Streptococcus phage Javan161, complete genome	20538-20573	7	0.806
NZ_ALRX01000048_1	1.11\|691\|36\|NZ_ALRX01000048\|CRT	691-726	36	MK448782	Streptococcus phage Javan501, complete genome	22718-22753	7	0.806
NZ_ALRX01000048_1	1.22\|559\|30\|NZ_ALRX01000048\|PILER-CR,CRISPRCasFinder	559-588	30	NZ_CP040345	Bacillus albus strain DLOU-Yingkou plasmid unnamed1, complete sequence	473664-473693	7	0.767
NZ_ALRX01000048_1	1.22\|559\|30\|NZ_ALRX01000048\|PILER-CR,CRISPRCasFinder	559-588	30	NZ_KJ776580	Clostridium botulinum strain CDC5900 plasmid pCDC5900, complete sequence	5593-5622	7	0.767
NZ_ALRX01000048_1	1.22\|559\|30\|NZ_ALRX01000048\|PILER-CR,CRISPRCasFinder	559-588	30	NZ_CP007625	Bacillus pseudomycoides strain 219298 plasmid unnamed, complete sequence	284952-284981	7	0.767
NZ_ALRX01000048_1	1.22\|559\|30\|NZ_ALRX01000048\|PILER-CR,CRISPRCasFinder	559-588	30	NZ_CP009650	Bacillus pseudomycoides strain BTZ plasmid pBTZ_1, complete sequence	227979-228008	7	0.767
NZ_ALRX01000048_1	1.22\|559\|30\|NZ_ALRX01000048\|PILER-CR,CRISPRCasFinder	559-588	30	MG592576	Vibrio phage 1.206.O._10N.222.51.B10, partial genome	27486-27515	7	0.767
NZ_ALRX01000048_1	1.25\|757\|30\|NZ_ALRX01000048\|PILER-CR,CRISPRCasFinder	757-786	30	NZ_CP019367	Borrelia turicatae 91E135 isolate Oz1 plasmid lpG29, complete sequence	25253-25282	7	0.767
NZ_ALRX01000048_1	1.11\|691\|36\|NZ_ALRX01000048\|CRT	691-726	36	MK448675	Streptococcus phage Javan129, complete genome	20835-20870	8	0.778
NZ_ALRX01000048_1	1.11\|691\|36\|NZ_ALRX01000048\|CRT	691-726	36	NC_004585	Streptococcus prophage 315.2, complete genome	19207-19242	8	0.778
NZ_ALRX01000048_1	1.11\|691\|36\|NZ_ALRX01000048\|CRT	691-726	36	MK448966	Streptococcus phage Javan508, complete genome	19062-19097	8	0.778
NZ_ALRX01000048_1	1.11\|691\|36\|NZ_ALRX01000048\|CRT	691-726	36	MK448772	Streptococcus phage Javan483, complete genome	19076-19111	8	0.778
NZ_ALRX01000048_1	1.11\|691\|36\|NZ_ALRX01000048\|CRT	691-726	36	MH853356	Streptococcus phage LF2, partial genome	42645-42680	8	0.778
NZ_ALRX01000048_1	1.21\|493\|30\|NZ_ALRX01000048\|PILER-CR,CRISPRCasFinder	493-522	30	MT774411	CrAssphage cr273_1, complete genome	91946-91975	8	0.733
NZ_ALRX01000048_1	1.21\|493\|30\|NZ_ALRX01000048\|PILER-CR,CRISPRCasFinder	493-522	30	MT774410	CrAssphage cr272_1, complete genome	40926-40955	8	0.733
NZ_ALRX01000048_1	1.21\|493\|30\|NZ_ALRX01000048\|PILER-CR,CRISPRCasFinder	493-522	30	NZ_CP045419	Pseudoalteromonas sp. THAF3 plasmid pTHAF3_a, complete sequence	428420-428449	8	0.733
NZ_ALRX01000048_1	1.21\|493\|30\|NZ_ALRX01000048\|PILER-CR,CRISPRCasFinder	493-522	30	NC_031274	Pseudomonas phage O4, complete genome	9990-10019	8	0.733
NZ_ALRX01000048_1	1.21\|493\|30\|NZ_ALRX01000048\|PILER-CR,CRISPRCasFinder	493-522	30	MF788075	Pseudomonas phage IME180, complete genome	9501-9530	8	0.733
NZ_ALRX01000048_1	1.22\|559\|30\|NZ_ALRX01000048\|PILER-CR,CRISPRCasFinder	559-588	30	NZ_LR214939	Mycoplasma salivarium strain NCTC10113 plasmid 2	655420-655449	8	0.733
NZ_ALRX01000048_1	1.22\|559\|30\|NZ_ALRX01000048\|PILER-CR,CRISPRCasFinder	559-588	30	NZ_CP020744	Bacillus mycoides strain Gnyt1 plasmid unnamed1, complete sequence	311665-311694	8	0.733
NZ_ALRX01000048_1	1.22\|559\|30\|NZ_ALRX01000048\|PILER-CR,CRISPRCasFinder	559-588	30	NZ_CP045607	Bacillus cereus strain SB1 plasmid p1, complete sequence	493398-493427	8	0.733
NZ_ALRX01000048_1	1.25\|757\|30\|NZ_ALRX01000048\|PILER-CR,CRISPRCasFinder	757-786	30	MK295204	Shigella phage vB_SdyM_006, complete genome	59264-59293	8	0.733
NZ_ALRX01000048_1	1.25\|757\|30\|NZ_ALRX01000048\|PILER-CR,CRISPRCasFinder	757-786	30	MG696114	Proteus phage phiP4-3, complete genome	106666-106695	8	0.733
NZ_ALRX01000048_1	1.9\|559\|36\|NZ_ALRX01000048\|CRT	559-594	36	NZ_CP040345	Bacillus albus strain DLOU-Yingkou plasmid unnamed1, complete sequence	473658-473693	9	0.75
NZ_ALRX01000048_1	1.11\|691\|36\|NZ_ALRX01000048\|CRT	691-726	36	MK448995	Streptococcus phage Javan626, complete genome	20462-20497	9	0.75
NZ_ALRX01000048_1	1.21\|493\|30\|NZ_ALRX01000048\|PILER-CR,CRISPRCasFinder	493-522	30	KU160641	Arthrobacter phage CaptnMurica, complete genome	18771-18800	9	0.7
NZ_ALRX01000048_1	1.21\|493\|30\|NZ_ALRX01000048\|PILER-CR,CRISPRCasFinder	493-522	30	MH825711	Arthrobacter phage Tenno, complete genome	18765-18794	9	0.7
NZ_ALRX01000048_1	1.9\|559\|36\|NZ_ALRX01000048\|CRT	559-594	36	NZ_CP040345	Bacillus albus strain DLOU-Yingkou plasmid unnamed1, complete sequence	474271-474306	10	0.722

1. spacer 1.20|427|30|NZ_ALRX01000048|PILER-CR,CRISPRCasFinder matches to MK448729 (Streptococcus phage Javan31, complete genome) position: , mismatch: 0, identity: 1.0

tatcgctcaagcattcgtatttgttttgga	CRISPR spacer
tatcgctcaagcattcgtatttgttttgga	Protospacer
******************************

2. spacer 1.20|427|30|NZ_ALRX01000048|PILER-CR,CRISPRCasFinder matches to MK448691 (Streptococcus phage Javan17, complete genome) position: , mismatch: 0, identity: 1.0

tatcgctcaagcattcgtatttgttttgga	CRISPR spacer
tatcgctcaagcattcgtatttgttttgga	Protospacer
******************************

3. spacer 1.20|427|30|NZ_ALRX01000048|PILER-CR,CRISPRCasFinder matches to MK448948 (Streptococcus phage Javan46, complete genome) position: , mismatch: 0, identity: 1.0

tatcgctcaagcattcgtatttgttttgga	CRISPR spacer
tatcgctcaagcattcgtatttgttttgga	Protospacer
******************************

4. spacer 1.20|427|30|NZ_ALRX01000048|PILER-CR,CRISPRCasFinder matches to MK448768 (Streptococcus phage Javan47, complete genome) position: , mismatch: 0, identity: 1.0

tatcgctcaagcattcgtatttgttttgga	CRISPR spacer
tatcgctcaagcattcgtatttgttttgga	Protospacer
******************************

5. spacer 1.21|493|30|NZ_ALRX01000048|PILER-CR,CRISPRCasFinder matches to MK448708 (Streptococcus phage Javan23, complete genome) position: , mismatch: 1, identity: 0.967

taccgcaataagatcaccaatgttgtttga	CRISPR spacer
taccgcaataagatcaccaatgttatttga	Protospacer
************************.*****

6. spacer 1.21|493|30|NZ_ALRX01000048|PILER-CR,CRISPRCasFinder matches to MK448897 (Streptococcus phage Javan28, complete genome) position: , mismatch: 1, identity: 0.967

taccgcaataagatcaccaatgttgtttga	CRISPR spacer
taccgcaataagatcaccaatgttatttga	Protospacer
************************.*****

7. spacer 1.24|691|30|NZ_ALRX01000048|PILER-CR,CRISPRCasFinder matches to JX409894 (Streptococcus phage LYGO9, complete genome) position: , mismatch: 1, identity: 0.967

taaaaaaggcaaaataaagcattctggcaa	CRISPR spacer
taaaaaaggcaaaataaagcactctggcaa	Protospacer
*********************.********

8. spacer 1.24|691|30|NZ_ALRX01000048|PILER-CR,CRISPRCasFinder matches to JX409895 (Streptococcus phage JX01, complete genome) position: , mismatch: 1, identity: 0.967

taaaaaaggcaaaataaagcattctggcaa	CRISPR spacer
taaaaaaggcaaaataaagcactctggcaa	Protospacer
*********************.********

9. spacer 1.7|427|36|NZ_ALRX01000048|CRT matches to MK448729 (Streptococcus phage Javan31, complete genome) position: , mismatch: 2, identity: 0.944

tatcgctcaagcattcgtatttgttttggagttttg	CRISPR spacer
tatcgctcaagcattcgtatttgttttggagttgtt	Protospacer
********************************* *

10. spacer 1.7|427|36|NZ_ALRX01000048|CRT matches to MK448691 (Streptococcus phage Javan17, complete genome) position: , mismatch: 2, identity: 0.944

tatcgctcaagcattcgtatttgttttggagttttg	CRISPR spacer
tatcgctcaagcattcgtatttgttttggagttgtt	Protospacer
********************************* *

11. spacer 1.7|427|36|NZ_ALRX01000048|CRT matches to MK448948 (Streptococcus phage Javan46, complete genome) position: , mismatch: 2, identity: 0.944

tatcgctcaagcattcgtatttgttttggagttttg	CRISPR spacer
tatcgctcaagcattcgtatttgttttggagttgtt	Protospacer
********************************* *

12. spacer 1.7|427|36|NZ_ALRX01000048|CRT matches to MK448768 (Streptococcus phage Javan47, complete genome) position: , mismatch: 2, identity: 0.944

tatcgctcaagcattcgtatttgttttggagttttg	CRISPR spacer
tatcgctcaagcattcgtatttgttttggagttgtt	Protospacer
********************************* *

13. spacer 1.24|691|30|NZ_ALRX01000048|PILER-CR,CRISPRCasFinder matches to MK448761 (Streptococcus phage Javan445, complete genome) position: , mismatch: 2, identity: 0.933

taaaaaaggcaaaataaagcattctggcaa	CRISPR spacer
taaaaacggcaaaataaagcattctggaaa	Protospacer
****** ******************** **

14. spacer 1.24|691|30|NZ_ALRX01000048|PILER-CR,CRISPRCasFinder matches to MK448760 (Streptococcus phage Javan443, complete genome) position: , mismatch: 2, identity: 0.933

taaaaaaggcaaaataaagcattctggcaa	CRISPR spacer
taaaaacggcaaaataaagcattctggaaa	Protospacer
****** ******************** **

15. spacer 1.24|691|30|NZ_ALRX01000048|PILER-CR,CRISPRCasFinder matches to MK448675 (Streptococcus phage Javan129, complete genome) position: , mismatch: 3, identity: 0.9

taaaaaaggcaaaataaagcattctggcaa	CRISPR spacer
caaaaaaggcaaaataaagcactctggtaa	Protospacer
.********************.*****.**

16. spacer 1.24|691|30|NZ_ALRX01000048|PILER-CR,CRISPRCasFinder matches to MK448973 (Streptococcus phage Javan522, complete genome) position: , mismatch: 3, identity: 0.9

taaaaaaggcaaaataaagcattctggcaa	CRISPR spacer
caaaaaaggcaaaataaagcactctggtaa	Protospacer
.********************.*****.**

17. spacer 1.24|691|30|NZ_ALRX01000048|PILER-CR,CRISPRCasFinder matches to NC_004585 (Streptococcus prophage 315.2, complete genome) position: , mismatch: 3, identity: 0.9

taaaaaaggcaaaataaagcattctggcaa	CRISPR spacer
caaaaaaggcaaaataaagcactctgggaa	Protospacer
.********************.***** **

18. spacer 1.24|691|30|NZ_ALRX01000048|PILER-CR,CRISPRCasFinder matches to MK448749 (Streptococcus phage Javan39, complete genome) position: , mismatch: 3, identity: 0.9

taaaaaaggcaaaataaagcattctggcaa	CRISPR spacer
caaaaaaggcaaaataaagcactctggtaa	Protospacer
.********************.*****.**

19. spacer 1.24|691|30|NZ_ALRX01000048|PILER-CR,CRISPRCasFinder matches to MK448955 (Streptococcus phage Javan478, complete genome) position: , mismatch: 3, identity: 0.9

taaaaaaggcaaaataaagcattctggcaa	CRISPR spacer
caaaaaaggcaaaataaagcactctggtaa	Protospacer
.********************.*****.**

20. spacer 1.24|691|30|NZ_ALRX01000048|PILER-CR,CRISPRCasFinder matches to MK448966 (Streptococcus phage Javan508, complete genome) position: , mismatch: 3, identity: 0.9

taaaaaaggcaaaataaagcattctggcaa	CRISPR spacer
caaaaaaggcaaaataaagcactctgggaa	Protospacer
.********************.***** **

21. spacer 1.24|691|30|NZ_ALRX01000048|PILER-CR,CRISPRCasFinder matches to MK448859 (Streptococcus phage Javan170, complete genome) position: , mismatch: 3, identity: 0.9

taaaaaaggcaaaataaagcattctggcaa	CRISPR spacer
caaaaaaggcaaaataaagcactctggtaa	Protospacer
.********************.*****.**

22. spacer 1.24|691|30|NZ_ALRX01000048|PILER-CR,CRISPRCasFinder matches to MK448690 (Streptococcus phage Javan169, complete genome) position: , mismatch: 3, identity: 0.9

taaaaaaggcaaaataaagcattctggcaa	CRISPR spacer
caaaaaaggcaaaataaagcactctggtaa	Protospacer
.********************.*****.**

23. spacer 1.24|691|30|NZ_ALRX01000048|PILER-CR,CRISPRCasFinder matches to MK448772 (Streptococcus phage Javan483, complete genome) position: , mismatch: 3, identity: 0.9

taaaaaaggcaaaataaagcattctggcaa	CRISPR spacer
caaaaaaggcaaaataaagcactctgggaa	Protospacer
.********************.***** **

24. spacer 1.24|691|30|NZ_ALRX01000048|PILER-CR,CRISPRCasFinder matches to MK448778 (Streptococcus phage Javan493, complete genome) position: , mismatch: 3, identity: 0.9

taaaaaaggcaaaataaagcattctggcaa	CRISPR spacer
caaaaaaggcaaaataaagcactctggtaa	Protospacer
.********************.*****.**

25. spacer 1.24|691|30|NZ_ALRX01000048|PILER-CR,CRISPRCasFinder matches to MK448962 (Streptococcus phage Javan496, complete genome) position: , mismatch: 3, identity: 0.9

taaaaaaggcaaaataaagcattctggcaa	CRISPR spacer
caaaaaaggcaaaataaagcactctggtaa	Protospacer
.********************.*****.**

26. spacer 1.24|691|30|NZ_ALRX01000048|PILER-CR,CRISPRCasFinder matches to MH853356 (Streptococcus phage LF2, partial genome) position: , mismatch: 3, identity: 0.9

taaaaaaggcaaaataaagcattctggcaa	CRISPR spacer
caagaaaggcaaaataaagcattctgggaa	Protospacer
.**.*********************** **

27. spacer 1.24|691|30|NZ_ALRX01000048|PILER-CR,CRISPRCasFinder matches to MK448850 (Streptococcus phage Javan132, complete genome) position: , mismatch: 3, identity: 0.9

taaaaaaggcaaaataaagcattctggcaa	CRISPR spacer
caaaaaaggcaaaataaagcactctggtaa	Protospacer
.********************.*****.**

28. spacer 1.24|691|30|NZ_ALRX01000048|PILER-CR,CRISPRCasFinder matches to MK448676 (Streptococcus phage Javan131, complete genome) position: , mismatch: 3, identity: 0.9

taaaaaaggcaaaataaagcattctggcaa	CRISPR spacer
caaaaaaggcaaaataaagcactctggtaa	Protospacer
.********************.*****.**

29. spacer 1.24|691|30|NZ_ALRX01000048|PILER-CR,CRISPRCasFinder matches to MK448975 (Streptococcus phage Javan526, complete genome) position: , mismatch: 3, identity: 0.9

taaaaaaggcaaaataaagcattctggcaa	CRISPR spacer
caaaaaaggcaaaataaagcactctggtaa	Protospacer
.********************.*****.**

30. spacer 1.24|691|30|NZ_ALRX01000048|PILER-CR,CRISPRCasFinder matches to MK448688 (Streptococcus phage Javan161, complete genome) position: , mismatch: 3, identity: 0.9

taaaaaaggcaaaataaagcattctggcaa	CRISPR spacer
caaaaaaggcaaaataaagcactctggtaa	Protospacer
.********************.*****.**

31. spacer 1.24|691|30|NZ_ALRX01000048|PILER-CR,CRISPRCasFinder matches to MK448995 (Streptococcus phage Javan626, complete genome) position: , mismatch: 3, identity: 0.9

taaaaaaggcaaaataaagcattctggcaa	CRISPR spacer
caaaaacggcaaaataaagcattctggaaa	Protospacer
.***** ******************** **

32. spacer 1.24|691|30|NZ_ALRX01000048|PILER-CR,CRISPRCasFinder matches to MK448782 (Streptococcus phage Javan501, complete genome) position: , mismatch: 3, identity: 0.9

taaaaaaggcaaaataaagcattctggcaa	CRISPR spacer
caaaaaaggcaaaataaagcactctggtaa	Protospacer
.********************.*****.**

33. spacer 1.8|493|36|NZ_ALRX01000048|CRT matches to MK448708 (Streptococcus phage Javan23, complete genome) position: , mismatch: 4, identity: 0.889

taccgcaataagatcaccaatgttgtttgagttttg	CRISPR spacer
taccgcaataagatcaccaatgttatttgatttcag	Protospacer
************************.***** **. *

34. spacer 1.8|493|36|NZ_ALRX01000048|CRT matches to MK448897 (Streptococcus phage Javan28, complete genome) position: , mismatch: 4, identity: 0.889

taccgcaataagatcaccaatgttgtttgagttttg	CRISPR spacer
taccgcaataagatcaccaatgttatttgatttcag	Protospacer
************************.***** **. *

35. spacer 1.22|559|30|NZ_ALRX01000048|PILER-CR,CRISPRCasFinder matches to NZ_CP040345 (Bacillus albus strain DLOU-Yingkou plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.833

gaacaagatgtagatatgaaattaacattt	CRISPR spacer
agctaagatgttgatatgaaattaacattt	Protospacer
.. .******* ******************

36. spacer 1.11|691|36|NZ_ALRX01000048|CRT matches to JX409894 (Streptococcus phage LYGO9, complete genome) position: , mismatch: 6, identity: 0.833

taaaaaaggcaaaataaagcattctggcaagttttg	CRISPR spacer
taaaaaaggcaaaataaagcactctggcaatccatt	Protospacer
*********************.******** .. *

37. spacer 1.11|691|36|NZ_ALRX01000048|CRT matches to JX409895 (Streptococcus phage JX01, complete genome) position: , mismatch: 6, identity: 0.833

taaaaaaggcaaaataaagcattctggcaagttttg	CRISPR spacer
taaaaaaggcaaaataaagcactctggcaatccatt	Protospacer
*********************.******** .. *

38. spacer 1.16|163|30|NZ_ALRX01000048|PILER-CR,CRISPRCasFinder matches to AP014352 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S39-C33, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 6, identity: 0.8

atttccataatcagtcgaaactgtaatttg	CRISPR spacer
atttgcataatcagttgaaactggtcttgg	Protospacer
**** **********.*******   ** *

39. spacer 1.24|691|30|NZ_ALRX01000048|PILER-CR,CRISPRCasFinder matches to NZ_MG205641 (Paeniclostridium sordellii strain 7508-A plasmid pCS1-7, complete sequence) position: , mismatch: 6, identity: 0.8

taaaaaaggcaaaataaagcattctggcaa	CRISPR spacer
tcaaaaagaaaaaataaagcattctcagaa	Protospacer
* ******. *************** . **

40. spacer 1.24|691|30|NZ_ALRX01000048|PILER-CR,CRISPRCasFinder matches to NZ_MG205642 (Paeniclostridium sordellii strain 7543-A plasmid pCS1-6, complete sequence) position: , mismatch: 6, identity: 0.8

taaaaaaggcaaaataaagcattctggcaa	CRISPR spacer
tcaaaaagaaaaaataaagcattctcagaa	Protospacer
* ******. *************** . **

41. spacer 1.24|691|30|NZ_ALRX01000048|PILER-CR,CRISPRCasFinder matches to AF424781 (Staphylococcus aureus phage phi 11, complete genome) position: , mismatch: 6, identity: 0.8

taaaaaaggcaaaataaagcattctggcaa	CRISPR spacer
taaaaaaggcaaaaaaacgcattaaatcaa	Protospacer
************** ** *****  . ***

42. spacer 1.24|691|30|NZ_ALRX01000048|PILER-CR,CRISPRCasFinder matches to NC_004615 (Staphylococcus phage 11, complete genome) position: , mismatch: 6, identity: 0.8

taaaaaaggcaaaataaagcattctggcaa	CRISPR spacer
taaaaaaggcaaaaaaacgcattaaatcaa	Protospacer
************** ** *****  . ***

43. spacer 1.24|691|30|NZ_ALRX01000048|PILER-CR,CRISPRCasFinder matches to NC_007063 (Staphylococcus phage 88, complete genome) position: , mismatch: 6, identity: 0.8

taaaaaaggcaaaataaagcattctggcaa	CRISPR spacer
taaaaaaggcaaaaaaacgcattaaatcaa	Protospacer
************** ** *****  . ***

44. spacer 1.24|691|30|NZ_ALRX01000048|PILER-CR,CRISPRCasFinder matches to AY954966 (Bacteriophage 88, complete genome) position: , mismatch: 6, identity: 0.8

taaaaaaggcaaaataaagcattctggcaa	CRISPR spacer
taaaaaaggcaaaaaaacgcattaaatcaa	Protospacer
************** ** *****  . ***

45. spacer 1.24|691|30|NZ_ALRX01000048|PILER-CR,CRISPRCasFinder matches to M34832 (Bacteriophage phi-11 integrase (int) and excisionase (xis) genes, complete cds) position: , mismatch: 6, identity: 0.8

taaaaaaggcaaaataaagcattctggcaa	CRISPR spacer
taaaaaaggcaaaaaaacgcattaaatcaa	Protospacer
************** ** *****  . ***

46. spacer 1.24|691|30|NZ_ALRX01000048|PILER-CR,CRISPRCasFinder matches to MN904510 (Staphylococcus phage vB_SauS-SAP27, complete genome) position: , mismatch: 6, identity: 0.8

taaaaaaggcaaaataaagcattctggcaa	CRISPR spacer
taaaaaaggcaaaaaaacgcattaaatcaa	Protospacer
************** ** *****  . ***

47. spacer 1.11|691|36|NZ_ALRX01000048|CRT matches to MK448761 (Streptococcus phage Javan445, complete genome) position: , mismatch: 7, identity: 0.806

taaaaaaggcaaaataaagcattctggcaagttttg	CRISPR spacer
taaaaacggcaaaataaagcattctggaaatccatt	Protospacer
****** ******************** ** .. *

48. spacer 1.11|691|36|NZ_ALRX01000048|CRT matches to MK448760 (Streptococcus phage Javan443, complete genome) position: , mismatch: 7, identity: 0.806

taaaaaaggcaaaataaagcattctggcaagttttg	CRISPR spacer
taaaaacggcaaaataaagcattctggaaatccatt	Protospacer
****** ******************** ** .. *

49. spacer 1.11|691|36|NZ_ALRX01000048|CRT matches to MK448973 (Streptococcus phage Javan522, complete genome) position: , mismatch: 7, identity: 0.806

taaaaaaggcaaaataaagcattctggcaagttttg	CRISPR spacer
caaaaaaggcaaaataaagcactctggtaacccttt	Protospacer
.********************.*****.** ..**

50. spacer 1.11|691|36|NZ_ALRX01000048|CRT matches to MK448749 (Streptococcus phage Javan39, complete genome) position: , mismatch: 7, identity: 0.806

taaaaaaggcaaaataaagcattctggcaagttttg	CRISPR spacer
caaaaaaggcaaaataaagcactctggtaacccttt	Protospacer
.********************.*****.** ..**

51. spacer 1.11|691|36|NZ_ALRX01000048|CRT matches to MK448955 (Streptococcus phage Javan478, complete genome) position: , mismatch: 7, identity: 0.806

taaaaaaggcaaaataaagcattctggcaagttttg	CRISPR spacer
caaaaaaggcaaaataaagcactctggtaacccttt	Protospacer
.********************.*****.** ..**

52. spacer 1.11|691|36|NZ_ALRX01000048|CRT matches to MK448859 (Streptococcus phage Javan170, complete genome) position: , mismatch: 7, identity: 0.806

taaaaaaggcaaaataaagcattctggcaagttttg	CRISPR spacer
caaaaaaggcaaaataaagcactctggtaacccttt	Protospacer
.********************.*****.** ..**

53. spacer 1.11|691|36|NZ_ALRX01000048|CRT matches to MK448690 (Streptococcus phage Javan169, complete genome) position: , mismatch: 7, identity: 0.806

taaaaaaggcaaaataaagcattctggcaagttttg	CRISPR spacer
caaaaaaggcaaaataaagcactctggtaacccttt	Protospacer
.********************.*****.** ..**

54. spacer 1.11|691|36|NZ_ALRX01000048|CRT matches to MK448778 (Streptococcus phage Javan493, complete genome) position: , mismatch: 7, identity: 0.806

taaaaaaggcaaaataaagcattctggcaagttttg	CRISPR spacer
caaaaaaggcaaaataaagcactctggtaacccttt	Protospacer
.********************.*****.** ..**

55. spacer 1.11|691|36|NZ_ALRX01000048|CRT matches to MK448962 (Streptococcus phage Javan496, complete genome) position: , mismatch: 7, identity: 0.806

taaaaaaggcaaaataaagcattctggcaagttttg	CRISPR spacer
caaaaaaggcaaaataaagcactctggtaacccttt	Protospacer
.********************.*****.** ..**

56. spacer 1.11|691|36|NZ_ALRX01000048|CRT matches to MK448850 (Streptococcus phage Javan132, complete genome) position: , mismatch: 7, identity: 0.806

taaaaaaggcaaaataaagcattctggcaagttttg	CRISPR spacer
caaaaaaggcaaaataaagcactctggtaacccttt	Protospacer
.********************.*****.** ..**

57. spacer 1.11|691|36|NZ_ALRX01000048|CRT matches to MK448676 (Streptococcus phage Javan131, complete genome) position: , mismatch: 7, identity: 0.806

taaaaaaggcaaaataaagcattctggcaagttttg	CRISPR spacer
caaaaaaggcaaaataaagcactctggtaacccttt	Protospacer
.********************.*****.** ..**

58. spacer 1.11|691|36|NZ_ALRX01000048|CRT matches to MK448975 (Streptococcus phage Javan526, complete genome) position: , mismatch: 7, identity: 0.806

taaaaaaggcaaaataaagcattctggcaagttttg	CRISPR spacer
caaaaaaggcaaaataaagcactctggtaacccttt	Protospacer
.********************.*****.** ..**

59. spacer 1.11|691|36|NZ_ALRX01000048|CRT matches to MK448688 (Streptococcus phage Javan161, complete genome) position: , mismatch: 7, identity: 0.806

taaaaaaggcaaaataaagcattctggcaagttttg	CRISPR spacer
caaaaaaggcaaaataaagcactctggtaacccttt	Protospacer
.********************.*****.** ..**

60. spacer 1.11|691|36|NZ_ALRX01000048|CRT matches to MK448782 (Streptococcus phage Javan501, complete genome) position: , mismatch: 7, identity: 0.806

taaaaaaggcaaaataaagcattctggcaagttttg	CRISPR spacer
caaaaaaggcaaaataaagcactctggtaacccttt	Protospacer
.********************.*****.** ..**

61. spacer 1.22|559|30|NZ_ALRX01000048|PILER-CR,CRISPRCasFinder matches to NZ_CP040345 (Bacillus albus strain DLOU-Yingkou plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

gaacaagatgtagatatgaaattaacattt	CRISPR spacer
atgaaaactgttgatatgaaattaacattt	Protospacer
. . **. *** ******************

62. spacer 1.22|559|30|NZ_ALRX01000048|PILER-CR,CRISPRCasFinder matches to NZ_KJ776580 (Clostridium botulinum strain CDC5900 plasmid pCDC5900, complete sequence) position: , mismatch: 7, identity: 0.767

gaacaagatgtagatatgaaattaacattt	CRISPR spacer
attcaaaatgaagatatgaaattaacagtg	Protospacer
.  ***.*** **************** *

63. spacer 1.22|559|30|NZ_ALRX01000048|PILER-CR,CRISPRCasFinder matches to NZ_CP007625 (Bacillus pseudomycoides strain 219298 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.767

gaacaagatgtagatatgaaattaacattt	CRISPR spacer
taagttactgttgatatgaaattaacattt	Protospacer
 **   . *** ******************

64. spacer 1.22|559|30|NZ_ALRX01000048|PILER-CR,CRISPRCasFinder matches to NZ_CP009650 (Bacillus pseudomycoides strain BTZ plasmid pBTZ_1, complete sequence) position: , mismatch: 7, identity: 0.767

gaacaagatgtagatatgaaattaacattt	CRISPR spacer
taagttactgttgatatgaaattaacattt	Protospacer
 **   . *** ******************

65. spacer 1.22|559|30|NZ_ALRX01000048|PILER-CR,CRISPRCasFinder matches to MG592576 (Vibrio phage 1.206.O._10N.222.51.B10, partial genome) position: , mismatch: 7, identity: 0.767

gaacaagatgtagatatgaaattaacattt	CRISPR spacer
gattaaggtgtagatattaaattaacaaga	Protospacer
** .***.********* *********

66. spacer 1.25|757|30|NZ_ALRX01000048|PILER-CR,CRISPRCasFinder matches to NZ_CP019367 (Borrelia turicatae 91E135 isolate Oz1 plasmid lpG29, complete sequence) position: , mismatch: 7, identity: 0.767

acagacatatttgtcactttataaaataat	CRISPR spacer
tcagacatatttgtctctttattaatttga	Protospacer
 ************** ****** ** * .

67. spacer 1.11|691|36|NZ_ALRX01000048|CRT matches to MK448675 (Streptococcus phage Javan129, complete genome) position: , mismatch: 8, identity: 0.778

taaaaaaggcaaaataaagcattctggcaagttttg	CRISPR spacer
caaaaaaggcaaaataaagcactctggtaacccatt	Protospacer
.********************.*****.** .. *

68. spacer 1.11|691|36|NZ_ALRX01000048|CRT matches to NC_004585 (Streptococcus prophage 315.2, complete genome) position: , mismatch: 8, identity: 0.778

taaaaaaggcaaaataaagcattctggcaagttttg	CRISPR spacer
caaaaaaggcaaaataaagcactctgggaacccatt	Protospacer
.********************.***** ** .. *

69. spacer 1.11|691|36|NZ_ALRX01000048|CRT matches to MK448966 (Streptococcus phage Javan508, complete genome) position: , mismatch: 8, identity: 0.778

taaaaaaggcaaaataaagcattctggcaagttttg	CRISPR spacer
caaaaaaggcaaaataaagcactctgggaacccatt	Protospacer
.********************.***** ** .. *

70. spacer 1.11|691|36|NZ_ALRX01000048|CRT matches to MK448772 (Streptococcus phage Javan483, complete genome) position: , mismatch: 8, identity: 0.778

taaaaaaggcaaaataaagcattctggcaagttttg	CRISPR spacer
caaaaaaggcaaaataaagcactctgggaacccatt	Protospacer
.********************.***** ** .. *

71. spacer 1.11|691|36|NZ_ALRX01000048|CRT matches to MH853356 (Streptococcus phage LF2, partial genome) position: , mismatch: 8, identity: 0.778

taaaaaaggcaaaataaagcattctggcaagttttg	CRISPR spacer
caagaaaggcaaaataaagcattctgggaatccgtt	Protospacer
.**.*********************** ** .. *

72. spacer 1.21|493|30|NZ_ALRX01000048|PILER-CR,CRISPRCasFinder matches to MT774411 (CrAssphage cr273_1, complete genome) position: , mismatch: 8, identity: 0.733

taccgcaataagatcaccaatgttgtttga	CRISPR spacer
cttgttaataagatcagcaatgttctttga	Protospacer
. .  .********** ******* *****

73. spacer 1.21|493|30|NZ_ALRX01000048|PILER-CR,CRISPRCasFinder matches to MT774410 (CrAssphage cr272_1, complete genome) position: , mismatch: 8, identity: 0.733

taccgcaataagatcaccaatgttgtttga	CRISPR spacer
cttgttaataagatcagcaatgttctttga	Protospacer
. .  .********** ******* *****

74. spacer 1.21|493|30|NZ_ALRX01000048|PILER-CR,CRISPRCasFinder matches to NZ_CP045419 (Pseudoalteromonas sp. THAF3 plasmid pTHAF3_a, complete sequence) position: , mismatch: 8, identity: 0.733

taccgcaataagatcaccaatgttgtttga	CRISPR spacer
gattacaataagatcaacaatgttatttat	Protospacer
 *...*********** *******.***.

75. spacer 1.21|493|30|NZ_ALRX01000048|PILER-CR,CRISPRCasFinder matches to NC_031274 (Pseudomonas phage O4, complete genome) position: , mismatch: 8, identity: 0.733

taccgcaataagatcaccaatgttgtttga	CRISPR spacer
tgtggcaataagaccaccactgttgttacc	Protospacer
*.. *********.***** *******

76. spacer 1.21|493|30|NZ_ALRX01000048|PILER-CR,CRISPRCasFinder matches to MF788075 (Pseudomonas phage IME180, complete genome) position: , mismatch: 8, identity: 0.733

taccgcaataagatcaccaatgttgtttga	CRISPR spacer
tgtggcaataagaccaccactgttgttacc	Protospacer
*.. *********.***** *******

77. spacer 1.22|559|30|NZ_ALRX01000048|PILER-CR,CRISPRCasFinder matches to NZ_LR214939 (Mycoplasma salivarium strain NCTC10113 plasmid 2) position: , mismatch: 8, identity: 0.733

gaacaagatgtagatatgaaattaacattt	CRISPR spacer
tacattcatgtagatattgaattaacattt	Protospacer
 *     ********** .***********

78. spacer 1.22|559|30|NZ_ALRX01000048|PILER-CR,CRISPRCasFinder matches to NZ_CP020744 (Bacillus mycoides strain Gnyt1 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733

gaacaagatgtagatatgaaattaacattt	CRISPR spacer
ctgttaaatgttgatatgaaatcaacattt	Protospacer
  .. *.**** **********.*******

79. spacer 1.22|559|30|NZ_ALRX01000048|PILER-CR,CRISPRCasFinder matches to NZ_CP045607 (Bacillus cereus strain SB1 plasmid p1, complete sequence) position: , mismatch: 8, identity: 0.733

gaacaagatgtagatatgaaattaacattt	CRISPR spacer
atcttaaatgttgatatgaaattaacatct	Protospacer
.  . *.**** ****************.*

80. spacer 1.25|757|30|NZ_ALRX01000048|PILER-CR,CRISPRCasFinder matches to MK295204 (Shigella phage vB_SdyM_006, complete genome) position: , mismatch: 8, identity: 0.733

acagacatatttgtcactttataaaataat	CRISPR spacer
gatgttttatttgacactttaaaaaataat	Protospacer
.  * . ****** ******* ********

81. spacer 1.25|757|30|NZ_ALRX01000048|PILER-CR,CRISPRCasFinder matches to MG696114 (Proteus phage phiP4-3, complete genome) position: , mismatch: 8, identity: 0.733

acagacatatttgtcactttataaaataat	CRISPR spacer
gatgttttatttgacactttaaaaaataat	Protospacer
.  * . ****** ******* ********

82. spacer 1.9|559|36|NZ_ALRX01000048|CRT matches to NZ_CP040345 (Bacillus albus strain DLOU-Yingkou plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.75

gaacaagatgtagatatgaaattaacatttgttttg	CRISPR spacer
atgaaaactgttgatatgaaattaacatttcttttt	Protospacer
. . **. *** ****************** ****

83. spacer 1.11|691|36|NZ_ALRX01000048|CRT matches to MK448995 (Streptococcus phage Javan626, complete genome) position: , mismatch: 9, identity: 0.75

taaaaaaggcaaaataaagcattctggcaagttttg	CRISPR spacer
caaaaacggcaaaataaagcattctggaaatccgct	Protospacer
.***** ******************** ** .. .

84. spacer 1.21|493|30|NZ_ALRX01000048|PILER-CR,CRISPRCasFinder matches to KU160641 (Arthrobacter phage CaptnMurica, complete genome) position: , mismatch: 9, identity: 0.7

taccgcaataagatcaccaatgttgtttga	CRISPR spacer
tgtgagaataagatcaccattgttgttaat	Protospacer
*.. . ************* ******* .

85. spacer 1.21|493|30|NZ_ALRX01000048|PILER-CR,CRISPRCasFinder matches to MH825711 (Arthrobacter phage Tenno, complete genome) position: , mismatch: 9, identity: 0.7

taccgcaataagatcaccaatgttgtttga	CRISPR spacer
tgtgagaataagatcaccattgttgttaat	Protospacer
*.. . ************* ******* .

86. spacer 1.9|559|36|NZ_ALRX01000048|CRT matches to NZ_CP040345 (Bacillus albus strain DLOU-Yingkou plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.722

gaacaagatgtagatatgaaattaacatttgttttg	CRISPR spacer
agctaagatgttgatatgaaattaacatttaccacg	Protospacer
.. .******* ******************... .*

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

6. NZ_ALRX01000045

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_ALRX01000045_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_ALRX01000045_1

46095-46176

Orphan

Consensus_repeat	Method
GCATACCCACGAGAGTAGATAAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_ALRX01000045_1

>merge|NZ_ALRX01000045|1|46095-46176|CRISPRCasFinder
GCATACCCACGAGAGTAGATAAACCGGCATCGCGTGAAGGATAGCTTGATTCAGAAGGCGCATACCCACGAGAGTAGACAAA

>NZ_ALRX01000045|1|1|46095-46176|CRISPRCasFinder
GCATACCCACGAGAGTAGATAAA	CCGGCATCGCGTGAAGGATAGCTTGATTCAGAAGGC
GCATACCCACGAGAGTAGACAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_ALRX01000045.1\|WP_000031280.1\|54844_56107_+\|Fe-S-cluster-assembly-protein-SufD	unknown	unknown	gnl\|CDD\|223791
NZ_ALRX01000045.1\|WP_001018987.1\|39982_40864_+\|fructose-bisphosphate-aldolase	unknown	unknown	gnl\|CDD\|180926
NZ_ALRX01000045.1\|WP_001140949.1\|42103_42292_+\|50S-ribosomal-protein-L28	unknown	unknown	gnl\|CDD\|234736
NZ_ALRX01000045.1\|WP_000612108.1\|52712_53873_+\|undecaprenyl/decaprenyl-phosphate-alpha-N-acetylglucosaminyl-1-phosphate-transferase	unknown	unknown	gnl\|CDD\|133463
NZ_ALRX01000045.1\|WP_000114502.1\|54037_54808_+\|Fe-S-cluster-assembly-ATPase-SufC	unknown	unknown	gnl\|CDD\|223473
NZ_ALRX01000045.1\|WP_000905327.1\|50996_51836_+\|undecaprenyl-diphosphate-phosphatase	unknown	unknown	gnl\|CDD\|234712
NZ_ALRX01000045.1\|WP_000189496.1\|46631_47372_-\|amino-acid-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224051
NZ_ALRX01000045.1\|WP_001868429.1\|42821_44453_+\|DAK2-domain-containing-protein	unknown	unknown	gnl\|CDD\|274671
NZ_ALRX01000045.1\|WP_000818733.1\|45576_45693_-\|putative-metal-homeostasis-protein	unknown	unknown	unknown
NZ_ALRX01000045.1\|WP_000197060.1\|40947_41865_-\|L-lactate-dehydrogenase	unknown	unknown	gnl\|CDD\|133427
NZ_ALRX01000045.1\|WP_000710516.1\|49067_50951_+\|DUF2207-domain-containing-protein	unknown	unknown	gnl\|CDD\|378333
NZ_ALRX01000045.1\|WP_000216445.1\|42423_42789_+\|Asp23/Gls24-family-envelope-stress-response-protein	unknown	unknown	gnl\|CDD\|224221
NZ_ALRX01000045.1\|WP_001218456.1\|57327_57771_+\|SUF-system-NifU-family-Fe-S-cluster-assembly-protein	unknown	unknown	gnl\|CDD\|273918
NZ_ALRX01000045.1\|WP_000425371.1\|51955_52711_+\|adaptor-protein-MecA	unknown	unknown	gnl\|CDD\|235030
NZ_ALRX01000045.1\|WP_000173341.1\|56108_57341_+\|cysteine-desulfurase	unknown	unknown	gnl\|CDD\|131034
NZ_ALRX01000045.1\|WP_000722379.1\|47381_48932_-\|ABC-transporter-substrate-binding-protein/permease	unknown	unknown	gnl\|CDD\|270345
NZ_ALRX01000045.1\|WP_000514047.1\|37244_38435_+\|argininosuccinate-synthase	unknown	unknown	gnl\|CDD\|234785
NZ_ALRX01000045.1\|WP_000164582.1\|38453_39842_+\|argininosuccinate-lyase	unknown	unknown	gnl\|CDD\|179143
NZ_ALRX01000045.1\|WP_000052520.1\|44600_45485_+\|SPFH-domain-containing-protein	unknown	unknown	gnl\|CDD\|259805
NZ_ALRX01000045.1\|WP_001868596.1\|36020_37091_+\|HAMP-domain-containing-histidine-kinase	unknown	unknown	gnl\|CDD\|223715

Protein	Function_ID	Function_description	E-value
NZ_ALRX01000045.1\|WP_000031280.1\|54844_56107_+\|Fe-S-cluster-assembly-protein-SufD	gnl\|CDD\|223791	COG0719, SufB, Cysteine desulfurase activator SufB [Posttranslational modification, protein turnover, chaperones].	1.81137e-126
NZ_ALRX01000045.1\|WP_001018987.1\|39982_40864_+\|fructose-bisphosphate-aldolase	gnl\|CDD\|180926	PRK07315, PRK07315, fructose-bisphosphate aldolase; Provisional.	0
NZ_ALRX01000045.1\|WP_001140949.1\|42103_42292_+\|50S-ribosomal-protein-L28	gnl\|CDD\|234736	PRK00359, rpmB, 50S ribosomal protein L28; Reviewed.	2.94959e-21
NZ_ALRX01000045.1\|WP_000114502.1\|54037_54808_+\|Fe-S-cluster-assembly-ATPase-SufC	gnl\|CDD\|223473	COG0396, sufC, Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones].	7.12681e-148
NZ_ALRX01000045.1\|WP_000905327.1\|50996_51836_+\|undecaprenyl-diphosphate-phosphatase	gnl\|CDD\|234712	PRK00281, PRK00281, undecaprenyl-diphosphate phosphatase.	5.20123e-101
NZ_ALRX01000045.1\|WP_000189496.1\|46631_47372_-\|amino-acid-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224051	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism].	1.92009e-143
NZ_ALRX01000045.1\|WP_001868429.1\|42821_44453_+\|DAK2-domain-containing-protein	gnl\|CDD\|274671	TIGR03599, YloV, DAK2 domain fusion protein YloV. This model describes a protein family that contains an N-terminal DAK2 domain (pfam02734), so named because of similarity to the dihydroxyacetone kinase family family. The GTP-binding protein CgtA (a member of the obg family) is a bacterial GTPase associated with ribosome biogenesis, and it has a characteristic extension (TIGR03595) in certain lineages. This protein family described here was found, by the method of partial phylognetic profiling, to have a phylogenetic distribution strongly correlated to that of TIGR03595. This correlation implies some form of functional coupling.	0
NZ_ALRX01000045.1\|WP_000612108.1\|52712_53873_+\|undecaprenyl/decaprenyl-phosphate-alpha-N-acetylglucosaminyl-1-phosphate-transferase	gnl\|CDD\|133463	cd06853, GT_WecA_like, This subfamily contains Escherichia coli WecA, Bacillus subtilis TagO and related proteins. WecA is an UDP-N-acetylglucosamine (GlcNAc):undecaprenyl-phosphate (Und-P) GlcNAc-1-phosphate transferase that catalyzes the formation of a phosphodiester bond between a membrane-associated undecaprenyl-phosphate molecule and N-acetylglucosamine 1-phosphate, which is usually donated by a soluble UDP-N-acetylglucosamine precursor. WecA participates in the biosynthesis of O antigen LPS in many enteric bacteria and is also involved in the biosynthesis of enterobacterial common antigen. A conserved short sequence motif and a conserved arginine at a cytosolic loop of this integral membrane protein were shown to be critical in recognition of substrate UDP-N-acetylglucosamine.	1.7754e-73
NZ_ALRX01000045.1\|WP_000197060.1\|40947_41865_-\|L-lactate-dehydrogenase	gnl\|CDD\|133427	cd05291, HicDH_like, L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.	2.38551e-147
NZ_ALRX01000045.1\|WP_000710516.1\|49067_50951_+\|DUF2207-domain-containing-protein	gnl\|CDD\|378333	pfam09972, DUF2207, Predicted membrane protein (DUF2207). This domain, found in various hypothetical bacterial proteins, has no known function.	1.03333e-71
NZ_ALRX01000045.1\|WP_000216445.1\|42423_42789_+\|Asp23/Gls24-family-envelope-stress-response-protein	gnl\|CDD\|224221	COG1302, COG1302, Uncharacterized protein conserved in bacteria [Function unknown].	4.6281e-36
NZ_ALRX01000045.1\|WP_001218456.1\|57327_57771_+\|SUF-system-NifU-family-Fe-S-cluster-assembly-protein	gnl\|CDD\|273918	TIGR01994, Iron-sulfur_cluster_assembly_scaffold_protein_IscU, SUF system FeS assembly protein, NifU family. Three iron-sulfur cluster assembly systems are known so far. ISC is broadly distributed while NIF tends to be associated with nitrogenase in nitrogen-fixing bacteria. The most recently described is SUF, believed to be important to maintain the function during aerobic stress of enzymes with labile Fe-S clusters. It is fairly widely distributed. This family represents one of two different proteins proposed to act as a scaffold on which the Fe-S cluster is built and from which it is transferred. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	1.98821e-70
NZ_ALRX01000045.1\|WP_000425371.1\|51955_52711_+\|adaptor-protein-MecA	gnl\|CDD\|235030	PRK02315, PRK02315, adaptor protein MecA.	1.75436e-87
NZ_ALRX01000045.1\|WP_000173341.1\|56108_57341_+\|cysteine-desulfurase	gnl\|CDD\|131034	TIGR01979, Probable_cysteine_desulfurase, cysteine desulfurases, SufSfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	0
NZ_ALRX01000045.1\|WP_000722379.1\|47381_48932_-\|ABC-transporter-substrate-binding-protein/permease	gnl\|CDD\|270345	cd13627, PBP2_AA_binding_like_2, Substrate-binding domain of putative amino acid-binding protein; the type 2 periplasmic-binding protein fold. This putative amino acid-binding protein belongs to the type 2 periplasmic-binding fold protein (PBP2) superfamily, whose members are involved in chemotaxis and uptake of nutrients and other small molecules from the extracellular space as a primary receptor. PBP2 typically comprises of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two receptor cytoplasmically-located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	7.89439e-91
NZ_ALRX01000045.1\|WP_000514047.1\|37244_38435_+\|argininosuccinate-synthase	gnl\|CDD\|234785	PRK00509, PRK00509, argininosuccinate synthase; Provisional.	0
NZ_ALRX01000045.1\|WP_000164582.1\|38453_39842_+\|argininosuccinate-lyase	gnl\|CDD\|179143	PRK00855, PRK00855, argininosuccinate lyase; Provisional.	0
NZ_ALRX01000045.1\|WP_000052520.1\|44600_45485_+\|SPFH-domain-containing-protein	gnl\|CDD\|259805	cd03407, SPFH_like_u4, Uncharacterized family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily. This model summarizes an uncharacterized family of proteins similar to stomatin, prohibitin, flotillin, HflK/C (SPFH) and podocin. The conserved domain common to the SPFH superfamily has also been referred to as the Band 7 domain. Many superfamily members are associated with lipid rafts. Individual proteins of the SPFH superfamily may cluster to form membrane microdomains which may in turn recruit multiprotein complexes. Microdomains formed from flotillin proteins may in addition be dynamic units with their own regulatory functions. Flotillins have been implicated in signal transduction, vesicle trafficking, cytoskeleton rearrangement and are known to interact with a variety of proteins. Stomatin interacts with and regulates members of the degenerin/epithelia Na+ channel family in mechanosensory cells of Caenorhabditis elegans and vertebrate neurons and participates in trafficking of Glut1 glucose transporters. Prohibitin may act as a chaperone for the stabilization of mitochondrial proteins. Prokaryotic HflK/C plays a role in the decision between lysogenic and lytic cycle growth during lambda phage infection. Flotillins have been implicated in the progression of prion disease, in the pathogenesis of neurodegenerative diseases such as Parkinson's and Alzheimer's disease and, in cancer invasion and metastasis. Mutations in the podocin gene give rise to autosomal recessive steroid resistant nephritic syndrome.	2.78758e-128
NZ_ALRX01000045.1\|WP_001868596.1\|36020_37091_+\|HAMP-domain-containing-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	1.82395e-50

>NZ_ALRX01000045.1|WP_000818733.1|45576_45693_-|putative-metal-homeostasis-protein
MAEKTDLSSAYRRLKSPNIKTRKRALKIIHEYKRYGKK
>NZ_ALRX01000045.1|WP_000052520.1|44600_45485_+|SPFH-domain-containing-protein
MSLIILTVILVLVIVLLITSLYVVKQQTVAIIERFGKYQKTATSGIHIRVPLGIDKIAARVQLRLLQSEIIVETKTKDNVFVTLNIATQYRVNENNVTDAYYKLIKPEAQIKSYIEDALRSSVPKLTLDELFEKKDEIALEVQHQVAEEMSTYGYIIVKTLITKVEPDAEVKQSMNEINAAQRKRVAAQELANADKIKIVTAAEAEAEKDRLHGVGIAQQRKAIVDGLADSIQELKDANVTLTEEQIMSILLTNQYLDTLNTFAINGNQTIFLPNNPEGVEDIRTQVLSALKTR
>NZ_ALRX01000045.1|WP_001868429.1|42821_44453_+|DAK2-domain-containing-protein
MVQAASTRLSKQAEYVNSLNVFPVPDGDTGTNMGMTMENGAKEVSDKPATTVGEVGQILSKGVLMGARGNSGVITSQLFRGFGQSIKDKEELTGQDLAHAFQNGVEVAYKAVMKPVEGTILTVSRGAATAALKKAEETDDAVEVMRATLKGAKRALAKTPDMLPVLKEVGVVDSGGQGLVFIYEGFLSALTGEYIASEDFKATPATMTEMVNAEHHKAVVGHVATEDIKYGYCTEVMVGLKQGPTYVKEFNYEEFQGYLSNLGDSLLVVNDDEIVKVHVHTEDPGLVMQEGLKYGSLVKVKVENMRNQHDAQMQKVEVEETVKETKEYGIIAVVAGDGLAEIFKSQGVDYIISGGQTMNPSTEDIVKAIEKVNARNVIILPNNKNIFMAAQSAADVVDIPAAVVETRTVPQGFTSLLAFDPAKSLETNVADMTNSLSDVISGSVTLAVRDTTIDGLEIHENDILGMVDGKILVSTPDMEKALKDTFDKMIDEDSEIVTIYVGEDGKQALAETLSEYLEETYEDVEVEIHQGDQPVYPYLMSVE
>NZ_ALRX01000045.1|WP_000216445.1|42423_42789_+|Asp23/Gls24-family-envelope-stress-response-protein
MTVKINTRDGQIELSDDVIATVVGGSATEIFGVVGMASKSAIKDNFQALLRKENYAKGVVVRSSEAGIVVDVYTVMSYGVKISEVSKNIQERVKFNLENQLGLSADMVNVYVQSIKVVGED
>NZ_ALRX01000045.1|WP_001140949.1|42103_42292_+|50S-ribosomal-protein-L28
MAKVCYFTGRKTVSGNNRSHAMNQTKRTVKPNLQKVTVLIDGKPKKVWVSARALKSGKVERV
>NZ_ALRX01000045.1|WP_000197060.1|40947_41865_-|L-lactate-dehydrogenase
MTRKIGIIGMGHVGSTVAHALIAQGIGDDYVFIDTNVDKVNADMIDFQDALANATYHANLVLNDYDALSDADVVISALGDISLQNNKEANRFAELPFTSKEVYDVSQKLKSSGFRGILIVVTNPVDAITQLYQEYTQFPKSRVIGTGTLLDTARMKRVLGQRLQVDPRSIGGYNLGEHGNSQFVAWSQVTVKGQPAISLLKAEELEQIKEASLKGGHTVFFGKKYTSYGIATAAVRIVLTVLNDSHELLPVSTFYESEGVYLGYPAIIGRVGIVERISLSLSPKEEQQLTDSAAFIRNYLKHINL
>NZ_ALRX01000045.1|WP_001018987.1|39982_40864_+|fructose-bisphosphate-aldolase
MAIVSAEKFVQAARDNGYAVGGFNTNNLEWTQAILRAAEAKKAPVLIQTSMGAAKYMGGYKLCKQLIETLVESMGITVPVAIHLDHGHYDDALECIEVGYTSIMFDGSHLPVEENLEKAREVVAKAHAKGISVEAEVGTIGGEEDGIVGKGELAPIEDAKAMVETGIDFLAAGIGNIHGPYPANWEGLDLDHLKKLTEAVPGFPIVLHGGSGIPDDQIQEAIKLGVAKVNVNTECQLAFCQATRDYAVEFNANEAEYMKKKLFDPRKFLKPGFDAITEAVEERIDVFGSANKA
>NZ_ALRX01000045.1|WP_000164582.1|38453_39842_+|argininosuccinate-lyase
MTKNHKLWGGRFESSLEKWVEEFGASISFDQKLAPYDMKASMAHVTMLGKTDIISQEEAGLIKDGLKILQDKYRAGQLTFSISNEDIHMNIESLLTAEIGEVAGKLHTARSRNDQVATDMHLYLKDKLQEMMKKLLHLRTTLVNLAENHIYTVMPGYTHLQHAQPISFGHHLMAYYNMFTRDTERLEFNMKHTNLSPLGAAALAGTTFPIDRHMTTRLLDFEKPYSNSLDAVSDRDFIIEFLSNASILMMHLSRFCEEIINWCSYEYQFITLSDTFSTGSSIMPQKKNPDMAELIRGKTGRVYGNLFSLLTVMKSLPLAYNKDLQEDKEGMFDSVETVSIAIEIMANMLETMTVNEHIMMTSTETDFSNATELADYLASKGVPFRKAHEIVGKLVLECSKNGSYLQDIPLKYYQEISELIENDIYEILTAKTAVKRRNSLGGTGFDQVKKQILLARKELKAE
>NZ_ALRX01000045.1|WP_000514047.1|37244_38435_+|argininosuccinate-synthase
MGKEKLILAYSGGLDTSVAIAWLKKDYDVIAVCMDVGEGKDLDFIHDKALTIGAIESYILDVKDEFAEHFVLPALQAHAMYEQKYPLVSALSRPIIAQKLVEMAHQTGATTIAHGCTGKGNDQVRFEVAIAALDPELKVIAPVREWKWHREEEITFAKANGVPIPADLDNPYSIDQNLWGRANECGVLENPWNQAPEEAFGITKSPEEAPDCAEYIDITFQNGKPIAINNQEMTLADLILSLNEIAGKHGIGRIDHVENRLVGIKSREIYECPAAMVLLAAHKEIEDLTLVREVSHFKPILENELSNLIYNALWFSPATKAIIAYVKETQKVVNGTTKVKLYKGSAQVVARHSSNSLYDENLATYTAADSFDQDAAVGFIKLWGLPTQVNAQVNKG
>NZ_ALRX01000045.1|WP_001868596.1|36020_37091_+|HAMP-domain-containing-histidine-kinase
MTKLRRFRFPLRFYFTLMFVLTMLFSVLASLLLVAAIVFTFFQGVLTTHVLQVSALAVVFLSLVIASISMWYGSYHLTKPILDISHIVSNVADGDFEGHIYRNSNRRKSYEYYNELDELSESINQMIVSLSHMDHMRKDFITNVSHELKTPIAAVANIVELLQDPELDEETQSELLGLVKTESLRLTRLCDTMLQMSRVDNQETIGELSSVRVDEQIRQAMISLTERWQAKRINFQLDSKPYTVYSNSDLLMQVWINLLDNAIKYSEDIVDLSVRMEETNNHYLRVIISDKGRGISQYDVQHIFDKFYQADQSHNQQGNGLGLAIVKRIIVLCKGRISVSSQLEIGTEFCVELPLS
>NZ_ALRX01000045.1|WP_000189496.1|46631_47372_-|amino-acid-ABC-transporter-ATP-binding-protein
MTQAILEIKHLKKSYGSNEVLKDISLSVNKGEVISIIGSSGSGKSTFLRSINLLEEPSGGEILYHGHNVLEKGYDLNNYREKLGMVFQSFNLFENLNILENAIVAQTTVLKRERQEAEKIAKENLNAVGMTEQYWKAKPKQLSGGQKQRVAIARALSVNPEAILFDEPTSALDPEMVGEVLKTMQDLAKSGLTMIIVTHEMEFAKEVSDRVIFMDKGIIAEQGTPKQLFENPTQERTKEFLQRFLK
>NZ_ALRX01000045.1|WP_000722379.1|47381_48932_-|ABC-transporter-substrate-binding-protein/permease
MKKILLSLFTALLITFGGMTSIQADEYLRVGMEAAYAPFNWTQNDNTNGAVPIEGTDQYANGYDVQVAKKLAKKLNKKVVVVKTKWEGLVPALTSGKLDMIIAGMSPTEERKKEINFSKPYYISEPTLVVNAEGKYTNAKNISDFKNAKVTAQQGVYLYNLIDQINGVKKEVAMGDFNQLRQAVESGVVDAYVSERPDATSAQTANPKLKMIELHQGFKTSDADTNISVGMRKGDNRINQVNQVLESISRDKQIALMDKMIKEQPSVKKEKNGKPNFFEQMATILKNNGSQFLRGTATTLLISMVGTIVGLFIGLLIGVFRTAPKSDNKLKAALQKLLGWLLNIYIEVFRGTPMIVQSMVIYYGTAQAFGVSLDRTLAAIFIVSINTGAYMSEIVRGGIFSVDKGQFEAATALGFTHGQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAIIYFILTFTVTRILRYIEKRFDSDNYTTGANQLQV
>NZ_ALRX01000045.1|WP_000710516.1|49067_50951_+|DUF2207-domain-containing-protein
MKKCFLAICLALSFFMVSVQADEVDYNIPHYEGNLTIHNDNSADFTEKVTYQFDSSYNGQYVTLGTAGKLPDNFDINNKPQVEVSINGKVRKVSYQIEDLEDGYRLKVFNGGEAGDTVKVNVQWKLKNVLFMHKDVGELNWIPISDWDKTLEKVDFWISTDKKVALSRLWGHLGYLKTPPKIRQNNNRYHLTAFNVNKRLEFHGYWDRSYFNLPTNSKNNYKKKIEYQEKMIERHGFILSFLLRILLPSFFIIVTLFISIRVFLFRKKVNKYGQFPKEHHLYEAPEDLSPLELTQSIYSMSFKNFQDEEKKTHLISQEQLIQSILLDLIDRKVLNYDDNLLSLANLDRASDAEIDFIEFAFADSTSLKPDQLFSNYQFSYKETLRELKKQHKASDLQTQMRRRGSNALSRITRLTRLISKDNINSLRRKGISSPYRKMSSEESKELSRLKRFSYLSPLISFVVIIYTLFLNYFTYFCIYLLLFGVILLLNKIIFMMTRKISNGYIVTEDGASRVYQWTSFRNMLRDIKSFDRSELESIVLWNRILVYATLFGYADRVEKVLRVNQIDIPERFANIDSHQFAISVNQSSNHFSTITEDVSHASNFSVNSGGSSGGFSGGGGGGGGGAF
>NZ_ALRX01000045.1|WP_000905327.1|50996_51836_+|undecaprenyl-diphosphate-phosphatase
MLIIELLKALFLGVVEGVTEWLPVSSTGHLILVQEFMKLNQSKSFVEMFNIVIQLGAIMAVIVIYFKRLNPFQPGKSAREIRLTWQLWLKVVIACIPSILIALPFDNWFEAHFNFMIPIAIALIFYGFVFIWVEKRNAHLKPQVTELASMSYKTAFLIGCFQVLSIVPGTSRSGATILGAIIIGTSRSVAADFTFFLAIPTMFGYSGLKAVKYFLDGNVLSLDQSLILLVASLTAFVVSLYVIRFLTDYVKRHDFTIFGKYRIVLGSLLILYWLVVHLF
>NZ_ALRX01000045.1|WP_000425371.1|51955_52711_+|adaptor-protein-MecA
MEMKQISETTLKITISMEDLEDRGMELKDFLIPQEKTEEFFYSVMDELDLPENFKNSGMLSFRVTPKKDRIDVFVTKSELSKDLNLEELADLGDISKMSPEDFFKTLEQSMLEKGDTDAHAKLAEIENMMDKATQEVVEENVSEEQPEKEVETIGYVHYVFDFDNIEAVVRFSQTIDFPIEASELYKNGKGYHMTILLDLENQPSYFANLMYARMLEHANVGTKTRAYLKEHSIQLIHDDAISKLQMIEMG
>NZ_ALRX01000045.1|WP_000612108.1|52712_53873_+|undecaprenyl/decaprenyl-phosphate-alpha-N-acetylglucosaminyl-1-phosphate-transferase
MIPFTIEYIFVLIGAFLLSIILTPIIRVISLKVGAVDKPNARRINKVPMPSSGGLAIFLSFVVTTLFFMPMAASRHFIEVSYFHYILPVIIGGLVVTTTGFIDDIFELRPRYKMLGIIIAAIIIWKFTHFRFDSFKIPIGGPLLEFGPILTFFLTVLWIISITNAINLIDGLDGLVSGVSIISLATMAVVSYFFLPKIDFFLTLTIVILIASIVGFFPYNYHPAIIYLGDAGALFIGFMIGVLSLQGLKNSTAVAVITPVIILGVPILDTAVAIVRRKLSGKKISEADKMHLHHRLLSMGFTHRGAVLVVYGIAIIFSLIALLLNVSSRIGGIFLLLALLLAMEIFIEGLNIWGENRTPLFNLLKFIGNSDYRQSVIAKYSDKHQK
>NZ_ALRX01000045.1|WP_000114502.1|54037_54808_+|Fe-S-cluster-assembly-ATPase-SufC
MSVLEIKNLHVSIEDKEILKGLNLTLKTGEIAAIMGPNGTGKSTLSAAIMGNPNYEVTAGEILFDGEDILELEVDERARLGLFLAMQYPSEVPGITNAEFIRAAMNAGKADDDKISIRQFITKLDEKMELLGMKEEMAERYLNEGFSGGEKKRNEILQLLMLEPKFALLDEIDSGLDIDALKVVSKGVNEMRGEGFGAMIITHYQRLLNYITPDKVHVMMDGKVVLSGGPELAVRLEKEGYAQIAEELGLEYKEEV
>NZ_ALRX01000045.1|WP_000031280.1|54844_56107_+|Fe-S-cluster-assembly-protein-SufD
MSKEAILNFLQAKGEPTWLQELRLKAFEKIEELELPVIERVKFHRWNLGDGTILENDYTANVPDFTELGNNPKLVQIGTQTVLEQVPMELIEKGVVFTDFYSALEEIPEVIERYFGKARPFEEDRLAAYHTAYFNSGAVLYIPDNVEITQPIEGLFYQDSQSKVPFNKHILLIVGKNAKVSYLERFESIGDGTERTSANISVEVIAQAGSQIKFASIDRLGENVTTFISRRGRHSSDATIDWALGVMNEGNVVADFDSDLIGDGSHANLKVVAASSGRQVQGIDTRVTNYGCNSVGHILQHGVILERGTLTFNGIGHIIKGAKGADAQQESRVLMLSDKARSDANPILLIDENDVTAGHAASIGQVDPEDLYYLMSRGLNQKTAEQLVIRGFLGTVIAEIPVKEVRDEMIAVIDTKLEKR
>NZ_ALRX01000045.1|WP_000173341.1|56108_57341_+|cysteine-desulfurase
MTLLDSYKLKQDFPILNQLVNDEPLIYLDNAATTQKPNQVLEALRDYYQNDNANVHRGVHTLAERATAQYENAREKARQFLNAKLSKEILFTRGTTTGLNWVAKFAESILERGDEVLISIMEHHSNIIPWQQACERTGAKLVYAYLKDGSLDLEDFYNKLSSKTKFVSLAHISNVLGCVTPVKAIAERVHQVGAYMVVDGAQSAPHMAIDVQDLDCDFFALSGHKMLGPTGIGVLYGKESILDKMPPVEFGGEMIDFVYEQSATWKELPWKFEAGTPNIAGAIAFGEALDYLTDVGMDEIHQYEQSLVSYVLPKLQAIDGLTIYGPSDAESHVGVIAFNLEGLHPHDVATAMDYEGVAVRAGHHCAQPLINHLGIHSAVRASFYFYNTKEDCDKLVDAIQKTKEFFNGTL
>NZ_ALRX01000045.1|WP_001218456.1|57327_57771_+|SUF-system-NifU-family-Fe-S-cluster-assembly-protein
MALSKLDNLYMAVVADHSKHPHHHGFLEGVEQVQLNNPTCGDVISLSVKFDGNIISDIAFAGNGCTISTASSSMMTDAVIGKTKEEALQLADVFSKMVQGDQNPKQEKLGDAEFLAGVSKFPQRIKCATLSWNALRKAIERDNQAEL

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

7. NZ_ALRX01000026

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

10577 : 22070

Streptococcus_phage(80.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000421280.1\|10577_10892_+	YdcP family protein	A0A1S5SF38	Streptococcus_phage	7.0e-43	76.7
WP_001234189.1\|10912_11290_+	YdcP family protein	A0A1S5SF96	Streptococcus_phage	5.6e-47	77.2
WP_000185760.1\|11299_12073_+	hypothetical protein	A0A0C4UQZ7	Shigella_phage	1.4e-07	25.5
WP_001130247.1\|12094_13498_+	DNA translocase FtsK	A0A1S5SFB5	Streptococcus_phage	2.3e-178	67.2
WP_000426691.1\|13679_14864_+	XRE family transcriptional regulator	A0A1S5SEX3	Streptococcus_phage	1.0e-158	67.6
WP_000055367.1\|14860_15133_+	hypothetical protein	NA	NA	NA	NA
WP_001009054.1\|15129_15351_+	hypothetical protein	A0A1S5SEY0	Streptococcus_phage	3.1e-29	93.2
WP_000678782.1\|15392_16172_+	abortive infection family protein	NA	NA	NA	NA
WP_000421245.1\|16233_16734_+	antirestriction protein ArdA	A0A1S5SF25	Streptococcus_phage	5.4e-53	61.1
WP_000195404.1\|16896_18063_+\|transposase	IS256 family transposase	A0A0N9STL0	Staphylococcus_phage	1.2e-106	76.0
WP_000234705.1\|18141_19167_+	hypothetical protein	NA	NA	NA	NA
WP_000723886.1\|19237_19633_+	conjugal transfer protein	A0A1S5SEX7	Streptococcus_phage	1.7e-49	75.0
WP_000941001.1\|19616_22070_+	ATP-binding protein	A0A1S5SF64	Streptococcus_phage	0.0e+00	79.1

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

8. NZ_ALRX01000038

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

9498 : 19771

Streptococcus_phage(57.14%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000638897.1\|9498_10644_-	cysteine desulfurase	A0A1X6WFP1	Pacmanvirus	7.3e-29	28.4
WP_000033716.1\|10890_11343_+	hypothetical protein	NA	NA	NA	NA
WP_000043877.1\|11386_12736_-	glutathione-disulfide reductase	A0A2K5B2C5	Erysipelothrix_phage	3.7e-32	25.5
WP_000024627.1\|12910_13246_-	YlbF/YmcA family competence regulator	A0A1X9I5Y8	Streptococcus_phage	1.2e-19	39.4
WP_001269902.1\|13329_14496_-	chorismate synthase	A0A291AU41	Pandoravirus	7.1e-40	34.4
WP_001195735.1\|14496_15564_-	3-dehydroquinate synthase	NA	NA	NA	NA
WP_000707048.1\|15657_16335_-	type I 3-dehydroquinate dehydratase	W6LP76	Streptococcus_phage	5.3e-88	68.4
WP_001037600.1\|16334_17492_-	class I SAM-dependent rRNA methyltransferase	W6LLI2	Streptococcus_phage	4.6e-140	66.0
WP_000721261.1\|17626_19771_+	LTA synthase family protein	W6LM83	Streptococcus_phage	6.3e-260	67.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

9. NZ_ALRX01000041

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

9026 : 16200

Staphylococcus_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001042665.1\|9026_9701_-	transglycosylase SLT domain-containing protein	Q4Z8Z7	Staphylococcus_phage	8.9e-27	54.3
WP_000029069.1\|9806_10346_-	LysM peptidoglycan-binding domain-containing protein	A0A249XZV3	Enterococcus_phage	1.3e-17	46.4
WP_000359358.1\|10561_11356_-	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA
WP_000510606.1\|11348_12191_-	energy-coupling factor transporter ATPase	W6JKT0	Anomala_cuprea_entomopoxvirus	2.5e-18	25.5
WP_000181758.1\|12166_13006_-	energy-coupling factor transporter ATPase	G9BWD6	Planktothrix_phage	3.5e-20	30.0
WP_000239225.1\|13005_13548_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA
WP_000217762.1\|13670_14954_-	insulinase family protein	A0A2K9V7S4	Bandra_megavirus	1.6e-21	33.3
WP_000706188.1\|14955_16200_-	insulinase family protein	A0A1X9I714	Streptococcus_phage	3.7e-87	41.3

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

10. NZ_ALRX01000025

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

8480 : 20545

Synechococcus_phage(28.57%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001042250.1\|8480_12206_+	phosphoribosylformylglycinamidine synthase	A6N228	Microbacterium_phage	1.9e-38	25.9
WP_000220676.1\|12439_13894_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	3.7e-54	32.7
WP_001291328.1\|13921_14944_+	phosphoribosylformylglycinamidine cyclo-ligase	R9TMC7	Synechococcus_phage	1.1e-63	42.7
WP_000685109.1\|15111_15660_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	1.4e-25	35.6
WP_000780022.1\|15682_16435_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_000166548.1\|16454_18002_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	E3SNU8	Prochlorococcus_phage	5.7e-45	52.9
WP_001045908.1\|18194_19094_+	peptidoglycan DD-metalloendopeptidase family protein	A0A221J6U0	Arthrobacter_phage	4.1e-19	45.9
WP_000783419.1\|19240_20545_+	LysM peptidoglycan-binding domain-containing protein	A0A0E3XB61	Gordonia_phage	1.2e-11	34.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

11. NZ_ALRX01000046

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

9526 : 14570

Streptococcus_phage(85.71%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001100460.1\|9526_9799_+	hypothetical protein	A0A1X9I5U9	Streptococcus_phage	1.8e-18	56.8
WP_001029296.1\|9799_10657_+	hypothetical protein	A0A1X9I6L2	Streptococcus_phage	3.0e-120	72.9
WP_000656430.1\|10668_12063_+	hypothetical protein	A0A1W6JQD6	Staphylococcus_phage	5.9e-49	38.4
WP_001069293.1\|12355_12613_+	hypothetical protein	NA	NA	NA	NA
WP_000694573.1\|12609_12783_+	hypothetical protein	A0A1X9I5U0	Streptococcus_phage	4.3e-10	56.1
WP_001258765.1\|12940_13498_+	hypothetical protein	A0A1X9I5U4	Streptococcus_phage	2.4e-30	59.8
WP_000891151.1\|13570_14059_+	hypothetical protein	A0A1X9I5V2	Streptococcus_phage	1.0e-48	58.6
WP_000038826.1\|14192_14570_+	DUF1492 domain-containing protein	J7KDQ1	Streptococcus_phage	2.8e-14	40.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

12. NZ_ALRX01000009

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_ALRX01000009_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_ALRX01000009_1

2271-2343

Orphan

Consensus_repeat	Method
TTAAAATAGTTCTCACGGTAACT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_ALRX01000009_1

>merge|NZ_ALRX01000009|1|2271-2343|CRISPRCasFinder
TTAAAATAGTTCTCACGGTAACTTTTAATTGACAATTAATAAAGGTTGTTTTAAAATAGTTCTCACGATAACT

>NZ_ALRX01000009|1|1|2271-2343|CRISPRCasFinder
TTAAAATAGTTCTCACGGTAACT	TTTAATTGACAATTAATAAAGGTTGTT
TTAAAATAGTTCTCACGATAACT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_ALRX01000009.1\|WP_000431168.1\|2360_2801_+\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224759
NZ_ALRX01000009.1\|WP_000449636.1\|6516_7143_+\|GTP-pyrophosphokinase	unknown	unknown	gnl\|CDD\|225232
NZ_ALRX01000009.1\|WP_000348824.1\|10035_10980_+\|diphosphomevalonate-decarboxylase	unknown	unknown	gnl\|CDD\|130307
NZ_ALRX01000009.1\|WP_000184895.1\|11961_12957_+\|type-2-isopentenyl-diphosphate-Delta-isomerase	unknown	unknown	gnl\|CDD\|235465
NZ_ALRX01000009.1\|WP_000659719.1\|9175_10054_+\|mevalonate-kinase	unknown	unknown	gnl\|CDD\|224493
NZ_ALRX01000009.1\|WP_000851081.1\|4654_6409_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055
NZ_ALRX01000009.1\|WP_001264422.1\|7144_7831_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_ALRX01000009.1\|WP_000489520.1\|7830_9060_+\|HAMP-domain-containing-histidine-kinase	unknown	unknown	gnl\|CDD\|223715
NZ_ALRX01000009.1\|WP_000481821.1\|2847_4665_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055
NZ_ALRX01000009.1\|WP_000726914.1\|19_2092_-\|bifunctional-metallophosphatase/5'-nucleotidase	unknown	unknown	gnl\|CDD\|277357
NZ_ALRX01000009.1\|WP_000241520.1\|10972_11965_+\|phosphomevalonate-kinase	unknown	unknown	gnl\|CDD\|224493

Protein	Function_ID	Function_description	E-value
NZ_ALRX01000009.1\|WP_000431168.1\|2360_2801_+\|MarR-family-transcriptional-regulator	gnl\|CDD\|224759	COG1846, MarR, Transcriptional regulators [Transcription].	5.33319e-11
NZ_ALRX01000009.1\|WP_000449636.1\|6516_7143_+\|GTP-pyrophosphokinase	gnl\|CDD\|225232	COG2357, COG2357, PpGpp synthetase catalytic domain [General function prediction only].	3.61226e-66
NZ_ALRX01000009.1\|WP_000348824.1\|10035_10980_+\|diphosphomevalonate-decarboxylase	gnl\|CDD\|130307	TIGR01240, Diphosphomevalonate_decarboxylase, diphosphomevalonate decarboxylase. This enzyme catalyzes the last step in the synthesis of isopentenyl diphosphate (IPP) in the mevalonate pathway. Alternate names: mevalonate diphosphate decarboxylase; pyrophosphomevalonate decarboxylase [Central intermediary metabolism, Other].	7.59601e-130
NZ_ALRX01000009.1\|WP_000184895.1\|11961_12957_+\|type-2-isopentenyl-diphosphate-Delta-isomerase	gnl\|CDD\|235465	PRK05437, PRK05437, isopentenyl pyrophosphate isomerase; Provisional.	2.62904e-164
NZ_ALRX01000009.1\|WP_000659719.1\|9175_10054_+\|mevalonate-kinase	gnl\|CDD\|224493	COG1577, ERG12, Mevalonate kinase [Lipid metabolism].	7.46303e-89
NZ_ALRX01000009.1\|WP_000851081.1\|4654_6409_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	2.61944e-164
NZ_ALRX01000009.1\|WP_001264422.1\|7144_7831_+\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	3.50685e-62
NZ_ALRX01000009.1\|WP_000489520.1\|7830_9060_+\|HAMP-domain-containing-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	7.70369e-24
NZ_ALRX01000009.1\|WP_000481821.1\|2847_4665_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	2.09295e-139
NZ_ALRX01000009.1\|WP_000726914.1\|19_2092_-\|bifunctional-metallophosphatase/5'-nucleotidase	gnl\|CDD\|277357	cd07412, MPP_YhcR_N, Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain. YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.	1.27123e-112
NZ_ALRX01000009.1\|WP_000241520.1\|10972_11965_+\|phosphomevalonate-kinase	gnl\|CDD\|224493	COG1577, ERG12, Mevalonate kinase [Lipid metabolism].	5.96893e-68

>NZ_ALRX01000009.1|WP_000726914.1|19_2092_-|bifunctional-metallophosphatase/5'-nucleotidase
MKKKIILKSSVLGLVAGTSIMFSSAFADQVGVQVIGVNDFHGALDNTGTANMPDGKVTNAGTAAQLDAYMDDAQKDFKQTNPNGESIRVQAGDMVGASPANSGLLQDEPTVKTFNAMNVEYGTLGNHEFDEGLAEYNRIVTGKAPAPDSNINNITKSYPHEAAKQEIVVANVIDKVNKQIPYNWKPYAIKNIPVNNKSVNVGFIGIVTKDIPNLVLRKNYEQYEFLDEAETIVKYAKELQAKNVKAIVVLAHVPATSKDDIAEGEAAEMMKKVNQLFPENSVDIVFAGHNHQYTNGLVGKTRIVQALSQGKAYADVRGVLDTDTQDFIETPSAKVVAVAPGKKTGSADIQAIVDQANTIVKQVTEAKIGTAEVSGMITRSVDQDNVSPVGSLITEAQLAIARKSWPDIDFAMTNNGGIRADLLIKPDGTITWGAAQAVQPFGNILQVVEITGRDLYKALNEQYDQKQNFFLQIAGLRYTYTDNKEGGEETPFKVVKAYKSNGEEINPDAKYKLVINDFLFGGGDGFASFRNAKLLGAINPDTEVFMAYITDLEKAGKKVSVPNNKPKIYVTMKMVNETITQNDGTHSIIKKLYLDRQGNIVAQEIVSDTLNQTKSKSTKINPVTTIHKKQLHQFTAINPMRNYGKPSNSTTVKSKQLPKTNSEYGQSFLMSVFGVGLIGIALNTKKKHMK
>NZ_ALRX01000009.1|WP_000431168.1|2360_2801_+|MarR-family-transcriptional-regulator
MENPLQKARILVNQLEKYLDRYAKEYDVEHLAGPQGHLVMHLYKHPDKDMSIKDAEEILHISKSVASNLVKRMEKNGFIAIVPSKTDKRVKYLYLTHLGKQKATQFEIFLEKLHSTMLAGITKEEIRTTKKVIRTLAKNMAMEDFD
>NZ_ALRX01000009.1|WP_000481821.1|2847_4665_+|ABC-transporter-ATP-binding-protein
MFNIFKRLNGKEWLMIVASTILVCLAVWMDLKTPEYMSDITRMLQTKGTKLEALWDPGLKMLAFSFGSFLVAVMVGFLGARTAASFTSRLRSDIFNHVMDYSDAEIKRFSIPSLLTRTTNDLTQLQILIVMGMQVVTRGPIMAIWALTKIWGKSDQWTGAVGVAVIIVMILLSVLLLLAFPRQRQIQGFTDALNATTREALSGVRVIRAYNAEKYQTDKFKRENDDLTKLNLFVYRLMSLMNPVMTVVSSGLTLAIYWIGSYLINDISVPKVTGTSVSVLAAKSAITDRVDLFSNMVVFSSYAMQVVMGFMMMVAIFIIMPRALVSVRRINEVLTLAPTVTFKENSHIQSAQKGQIEFQDVSFHYSKDSEAVIEHVSFKADTGQTVAFIGSTGSGKSTLVNLVPRFYDATEGAIKLDGIDIKEYSHNDLNNKIGYIPQKAVLFSGTVRSNMILGESGREELSDEEIWQALELAQAKEFIEAKEKGLDTEVAQGGSNFSGGQKQRLAIARALARHPEILIFDDSFSALDYKTDHILRHELKEKTAAMTKLIVAQRISTIMDADLILVLDQGKVVGQGTHKELLSNNEVYQEIAYSQLSKEELENEN
>NZ_ALRX01000009.1|WP_000851081.1|4654_6409_+|ABC-transporter-ATP-binding-protein
MKTKSQKTSFFSNLSPYLKGYKLLFALAIVLATLSSLTTVIGPDRLKEMTDLMVKGLAGNIDLAKIGHIAGQLAVLYVLGALVSYLASFIVTTIIQKFAQGMRNAIADKINKIPLSYFDSHTQGDTLSRVTNDVDLMTQSFNQSLVTMVASTVLLIGSLIMMFKTDWHLATTAIISVFSGFALSSIIMVKSQPLFKKQQMNLANISGYVEEIYSGHNIVTSHNARQQAKSDFQLLNDKIHSSMWKSQFFSGIMMPLMQFIGNFGYVMVCVVGAMLAIKGTITMGTIVAFMTYVRIFTQPIGQIAQGITQLQSASAAMGRVFEFLNETNMQEDKHKVLNLPKFKGYVSFEHVKFGYSDNKTIIHDFTSEAQPGQKVAIVGPTGAGKTTIVNLLMRFYDVNSGSISIDDINIQDMKRSQVHDAFSMVLQDIWLFEGTIKENLIFNQTTISDDEVQEAAKAVGVHHFIMTLPKGYDTVLDDAVTLSVGQKQLLTIARALLKNSPLLILDEATSSVDTRTEELIQKAMDKLMEGRTSFVIAHRLSTIKNADLILVMKDGNIIEQGSHDVLMSQSGFYADLYNSQFESA
>NZ_ALRX01000009.1|WP_000449636.1|6516_7143_+|GTP-pyrophosphokinase
METNIYGDYGRYLPLILEDFSQRIQLENDKAKVETGYKLYEHIIGRIKTSDSMIEKCRRKQLPVTVDSALKAIRDSIGVRIICGFVNDIYQIVERIKSFDDCRIVVEKDYIQHVKPNGYRSYHVILEIDTPYPDCLGNSEGKYYIEIQLRTIAQDSWASLEHQMKYKHDIENPERIVRELKRCADEMASVDLTMQTIRQLIESGTKKE
>NZ_ALRX01000009.1|WP_001264422.1|7144_7831_+|response-regulator-transcription-factor
MRVLIAEDEEQMSRVLSTAISHQGYVVDVAYDGQTAIDLANQNAYDVMVMDVMMPVKTGVEAVKEIRQSGNKSHIIMLTAMAEIDDRVTGLDAGADDYLTKPFSLKELLARLRSMSRRLEDFTPNVLSLGRVTLSVGEQELQCENTIRLAGKEAKMLAFFMLNHDKELSTQQLFEHVWGADKDQEDVDEGYVFIYVSYLRQKLQAISANLEIIGQEGSSYKLSEINGG
>NZ_ALRX01000009.1|WP_000489520.1|7830_9060_+|HAMP-domain-containing-histidine-kinase
MFRNLRLRFIGIAALAILVVLFSVVGVLNSANHYQTKNEIYRVLTILADNNGRIPNKLEFSKELGDDLSTDAIFQFRYFSARTDAKGNVTSFDSRNIFEVSDRQIKNYAKRIVSQNSDSGHITYNFSTYSYLLKKVGKNDYLVVFLDTTNQYLDNQRLLQLSIWMSLASFIVFMVIVSVLSGRVILPFVANYEKQRRFITNAGHELKTPLAIISANNELVEMMSGESEWTKSTNDQIQRLTGLINGMVSLARFEEQPDISMVDLDFSHITKDAAEDFKGPIIKDGKDFIMSIQPGIHVKAEEKSLFELVTLLVDNANKYCDPMGTVTVKLSRSSRLRRAKLEVSNTYKNGKDIDYSKFFERFYREDESHNNKKSGYGIGLSIVTSLVHLFKGSIDVNYKHDTITFVIYI
>NZ_ALRX01000009.1|WP_000659719.1|9175_10054_+|mevalonate-kinase
MKEKFGIGKAHSKIILMGEHSVVYGYPAIAIPLKNIEVTCLIEEAPQLIALDMTDPLSTAIFAALDYLGKTSSKIAYHIESQVPERRGMGSSAAVAIAAIRAVFDYFDEDLEADLLECLVNRAEMIAHSNPSGLDAKTCLSENTIKFIRNIGFSTVPMHLNAYLVIADTGIHGHTKEAVDKVKSSGEAVLPFLKELGYLAEASEDAIHKSDSKQLGSLMTKAHQSLKQLGVSSLEADHLVEVAISCGALGAKMSGGGLGGCIIALVKEKREAERLSQQLEREGAVNTWTEKV
>NZ_ALRX01000009.1|WP_000348824.1|10035_10980_+|diphosphomevalonate-decarboxylase
MDGKSISVKSYANIAIIKYWGKADAEKMIPATSSISLTLENMYTETRLTTLGKDAKKDEFYISGVLQNDHEHDKMSAILDRFRQNKSGFVKIETTNNMPTAAGLSSSSSGLSALLKACNDFFGTNLSQSQLAQEAKFASGSSSRSFFGPVAAWDKDSGDIYKVHTDLDLAMIMLVLNDKRKPISSREGMKICTETSTTFNEWVRQSEQDYQDMLVYLKNNDFQKVGQLTERNALAMHSTTKTATPAFSYLTEETYKAMDVVKKLREKGHECYYTMDAGPNVKVLCLRQDLEALAAILEKDYRIIVSTTKELADG
>NZ_ALRX01000009.1|WP_000241520.1|10972_11965_+|phosphomevalonate-kinase
MVKVQTGGKLYIAGEYAILYPGQVAILKNIPIYMTALATFADNYSLYSDMFNYTASLQPDKQYSLIQETILLMEEWLINFGKNIKPIHLEITGKLERYGLKFGIGSSGSVVVLTIKAMAALYEIEMPSDLLFKLSAYVLLKRGDNGSMGDIACIAYEHLISYSAFDRRAVSKMIETKPLEQVLEAEWGYRITKIQASLEMDFLVGWTMQPSISKEMINIVKSTITQRFLDDTNYQVVQLLSAFKEGDKEAIKRCLEEISLLLFNLHPSIYTDKLQKLKEASKGLDIVTKSSGSGGGDCGIAISFNKNDNQTLIKRWESAGIELLSKETLS
>NZ_ALRX01000009.1|WP_000184895.1|11961_12957_+|type-2-isopentenyl-diphosphate-Delta-isomerase
MTNRKDDHIKYALKYQSPYNSFDDIELIHSSLPKYNVNDIDLSTHFAGQSFEFPFYINAMTGGSEKGKAVNHKLAQVAQATGIVMATGSYSAALKNDEDDSYPTTDLYPDLKLATNIGLDKPLPAAESTVKAMNPIFLQVHVNVMQELLMPEGEREFHMWRSHLKEYVDNIQCPLILKEVGFGMDLQSIKDAYDIGITTVDISGRGGTSFAYIENQRGRDRSYLNTWGQTTAQSLINAQSMMDKMDILASGGIRHPLDMVKCLVLGAKAVGLSRTVLELVERYPVDDVIAILNSWKEDLRMIMCALNCKKITDLRQVNYILYGQLKEANAK

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_ALRX01000009_1	1.1\|2294\|27\|NZ_ALRX01000009\|CRISPRCasFinder	2294-2320	27	NZ_CP024108	Bacillus cytotoxicus strain CH_15 plasmid pCh15_83, complete sequence	19107-19133	6	0.778
NZ_ALRX01000009_1	1.1\|2294\|27\|NZ_ALRX01000009\|CRISPRCasFinder	2294-2320	27	NZ_CP024100	Bacillus cytotoxicus strain CH_38 plasmid pCh38_83, complete sequence	81938-81964	6	0.778
NZ_ALRX01000009_1	1.1\|2294\|27\|NZ_ALRX01000009\|CRISPRCasFinder	2294-2320	27	NZ_CP024122	Bacillus cytotoxicus strain CH_1 plasmid pCh1_67, complete sequence	36523-36549	6	0.778
NZ_ALRX01000009_1	1.1\|2294\|27\|NZ_ALRX01000009\|CRISPRCasFinder	2294-2320	27	NZ_CP024115	Bacillus cytotoxicus strain CH_3 plasmid pCh3_83, complete sequence	6072-6098	6	0.778
NZ_ALRX01000009_1	1.1\|2294\|27\|NZ_ALRX01000009\|CRISPRCasFinder	2294-2320	27	NZ_CP024110	Bacillus cytotoxicus strain CH_13 plasmid pCh13_79, complete sequence	12311-12337	6	0.778
NZ_ALRX01000009_1	1.1\|2294\|27\|NZ_ALRX01000009\|CRISPRCasFinder	2294-2320	27	NZ_CP024106	Bacillus cytotoxicus strain CH_23 plasmid pCh23_67, complete sequence	66618-66644	6	0.778
NZ_ALRX01000009_1	1.1\|2294\|27\|NZ_ALRX01000009\|CRISPRCasFinder	2294-2320	27	NZ_CP024118	Bacillus cytotoxicus strain CH_2 plasmid pCh2_83, complete sequence	12322-12348	6	0.778
NZ_ALRX01000009_1	1.1\|2294\|27\|NZ_ALRX01000009\|CRISPRCasFinder	2294-2320	27	NZ_CP024097	Bacillus cytotoxicus strain CH_39 plasmid pCh39_83, complete sequence	23267-23293	6	0.778
NZ_ALRX01000009_1	1.1\|2294\|27\|NZ_ALRX01000009\|CRISPRCasFinder	2294-2320	27	NZ_CP024103	Bacillus cytotoxicus strain CH_25 plasmid pCh25_67, complete sequence	36800-36826	6	0.778

1. spacer 1.1|2294|27|NZ_ALRX01000009|CRISPRCasFinder matches to NZ_CP024108 (Bacillus cytotoxicus strain CH_15 plasmid pCh15_83, complete sequence) position: , mismatch: 6, identity: 0.778

tttaattgacaattaataaaggttgtt	CRISPR spacer
ttttattgacaattaataaagggcaag	Protospacer
*** ****************** ..

2. spacer 1.1|2294|27|NZ_ALRX01000009|CRISPRCasFinder matches to NZ_CP024100 (Bacillus cytotoxicus strain CH_38 plasmid pCh38_83, complete sequence) position: , mismatch: 6, identity: 0.778

tttaattgacaattaataaaggttgtt	CRISPR spacer
ttttattgacaattaataaagggcaag	Protospacer
*** ****************** ..

3. spacer 1.1|2294|27|NZ_ALRX01000009|CRISPRCasFinder matches to NZ_CP024122 (Bacillus cytotoxicus strain CH_1 plasmid pCh1_67, complete sequence) position: , mismatch: 6, identity: 0.778

tttaattgacaattaataaaggttgtt	CRISPR spacer
ttttattgacaattaataaagggcaag	Protospacer
*** ****************** ..

4. spacer 1.1|2294|27|NZ_ALRX01000009|CRISPRCasFinder matches to NZ_CP024115 (Bacillus cytotoxicus strain CH_3 plasmid pCh3_83, complete sequence) position: , mismatch: 6, identity: 0.778

tttaattgacaattaataaaggttgtt	CRISPR spacer
ttttattgacaattaataaagggcaag	Protospacer
*** ****************** ..

5. spacer 1.1|2294|27|NZ_ALRX01000009|CRISPRCasFinder matches to NZ_CP024110 (Bacillus cytotoxicus strain CH_13 plasmid pCh13_79, complete sequence) position: , mismatch: 6, identity: 0.778

tttaattgacaattaataaaggttgtt	CRISPR spacer
ttttattgacaattaataaagggcaag	Protospacer
*** ****************** ..

6. spacer 1.1|2294|27|NZ_ALRX01000009|CRISPRCasFinder matches to NZ_CP024106 (Bacillus cytotoxicus strain CH_23 plasmid pCh23_67, complete sequence) position: , mismatch: 6, identity: 0.778

tttaattgacaattaataaaggttgtt	CRISPR spacer
ttttattgacaattaataaagggcaag	Protospacer
*** ****************** ..

7. spacer 1.1|2294|27|NZ_ALRX01000009|CRISPRCasFinder matches to NZ_CP024118 (Bacillus cytotoxicus strain CH_2 plasmid pCh2_83, complete sequence) position: , mismatch: 6, identity: 0.778

tttaattgacaattaataaaggttgtt	CRISPR spacer
ttttattgacaattaataaagggcaag	Protospacer
*** ****************** ..

8. spacer 1.1|2294|27|NZ_ALRX01000009|CRISPRCasFinder matches to NZ_CP024097 (Bacillus cytotoxicus strain CH_39 plasmid pCh39_83, complete sequence) position: , mismatch: 6, identity: 0.778

tttaattgacaattaataaaggttgtt	CRISPR spacer
ttttattgacaattaataaagggcaag	Protospacer
*** ****************** ..

9. spacer 1.1|2294|27|NZ_ALRX01000009|CRISPRCasFinder matches to NZ_CP024103 (Bacillus cytotoxicus strain CH_25 plasmid pCh25_67, complete sequence) position: , mismatch: 6, identity: 0.778

tttaattgacaattaataaaggttgtt	CRISPR spacer
ttttattgacaattaataaagggcaag	Protospacer
*** ****************** ..

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

13. NZ_ALRX01000047

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1170 : 10766

Streptococcus_phage(77.78%)

integrase

attL 2923:2937|attR 18559:18573

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000768375.1\|1170_2100_+	peptidase P60	A0A1S5SEZ8	Streptococcus_phage	9.5e-112	67.8
WP_012972536.1\|2107_3046_+	conjugal transfer protein	A0A1S5SF22	Streptococcus_phage	1.1e-83	56.6
2923:2937	attL	NA	NA	NA	NA
WP_011058339.1\|3320_3407_+	tetracycline resistance determinant leader peptide	NA	NA	NA	NA
WP_000691737.1\|3422_5342_+	tetracycline resistance ribosomal protection protein Tet(M)	A0A1S5SF82	Streptococcus_phage	0.0e+00	97.2
WP_001803271.1\|5460_5628_+	conjugal transfer protein	D0R0F6	Streptococcus_phage	2.3e-13	62.0
WP_001227349.1\|5685_6039_-	helix-turn-helix transcriptional regulator	A0A1S5SFA6	Streptococcus_phage	1.3e-53	90.5
WP_002320864.1\|6510_6993_+	sigma-70 family RNA polymerase sigma factor	A0A1S5SEW0	Streptococcus_phage	1.2e-49	70.0
WP_000845144.1\|6989_7220_+	helix-turn-helix domain-containing protein	A0A1S5SEX1	Streptococcus_phage	7.9e-28	78.9
WP_000633909.1\|7715_7916_+	DUF3173 domain-containing protein	NA	NA	NA	NA
WP_000237798.1\|7942_9136_+\|integrase	site-specific integrase	H0UST3	Bacillus_phage	1.2e-45	35.8
WP_000129872.1\|9203_10766_-	glutamine-hydrolyzing GMP synthase	A0A1V0SH76	Hokovirus	4.9e-20	31.7
18559:18573	attR	NA	NA	NA	NA

DBSCAN-SWA_2

48648 : 58031

uncultured_Caudovirales_phage(28.57%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000120355.1\|48648_49350_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	9.2e-35	39.9
WP_000246611.1\|49486_51607_-	type I DNA topoisomerase	E3T4K4	Cafeteria_roenbergensis_virus	1.1e-102	37.7
WP_001015250.1\|51701_52544_-	DNA-protecting protein DprA	S6BFL3	Thermus_phage	8.5e-27	35.8
WP_000162771.1\|52681_53710_-	siderophore ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_000614752.1\|53771_54533_-	ATP-binding cassette domain-containing protein	Q9EMR9	Amsacta_moorei_entomopoxvirus	1.7e-18	28.6
WP_000588576.1\|54529_55504_-	iron chelate uptake ABC transporter family permease subunit	A0A2H4IY97	uncultured_Caudovirales_phage	3.6e-05	21.2
WP_000735588.1\|55500_56463_-	iron chelate uptake ABC transporter family permease subunit	A0A2H4IY97	uncultured_Caudovirales_phage	3.3e-83	50.3
WP_000136506.1\|56700_57249_-	sugar O-acetyltransferase	NA	NA	NA	NA
WP_000201088.1\|57269_58031_-	ribonuclease HII	D2TEQ2	Emiliania_huxleyi_virus	1.5e-25	40.7

DBSCAN-SWA_3

114800 : 123793

Bacillus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000222543.1\|114800_116519_+	phospho-sugar mutase	A0A1X9I671	Streptococcus_phage	1.8e-278	84.8
WP_000746858.1\|116542_116782_-	hypothetical protein	NA	NA	NA	NA
WP_000647638.1\|116795_118529_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	5.1e-50	31.0
WP_000826946.1\|118529_120251_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	2.8e-40	26.7
WP_000472259.1\|120262_120865_-	lysozyme family protein	A0A223LKM8	Bacillus_phage	1.1e-20	40.1
WP_000968655.1\|120866_121844_-	nucleoid-associated protein	NA	NA	NA	NA
WP_000575550.1\|121848_123105_-	serine hydroxymethyltransferase	A0A240F3L3	Aeromonas_phage	7.8e-93	51.7
WP_000998735.1\|123196_123793_-	threonylcarbamoyl-AMP synthase	A0A291ATS8	Pandoravirus	1.1e-15	29.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

14. NZ_ALRX01000053

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_ALRX01000053_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_ALRX01000053_1

66543-67604

Orphan

Consensus_repeat	Method
NGCGCTNGTNCTNGCTGA	CRT

19 spacers

The CRISPR arrays of NZ_ALRX01000053_1

>merge|NZ_ALRX01000053|1|66543-67604|CRT
GACGCTGGTGCTGGCTGACGTCGTGGCACTCATTGAAGCGCTAGTGCTGGCTGACATCGAGGCACTTGTTGAAGCACTTGTGCTGGCTGACATTGACGCACTCGTTGAAGCGCTAGTGCTGGCTGACGTCGAGGCACTCATTGAAGCGCTAGTGCTGGCTGACATCGAGGCACTTGTTGAAGAACTTGTGCTGGCTGACATTGACGCACTCGTTGAGGCGCTAGTGCTGGCTGATGTCGATGCACTGGTACTTGCACTTGTGGAAGAACTTGTACTTGCCGATGTTGAGGCGCTAGTACTTGCTGACGTGGAGGCACTCGTACTTGCACTTGTTGAAGCGCTGGTACTTGCTGATGTCGATGCACTCATTGAGGCGCTAGTACTTGCACTTGTGGAAGCACTGGTGCTGGCTGACGTCGATGCACTCATTGAGGCGCTAGTACTTGCTGACGTGGAGGCACTCGTACTTGCTGACGTGGATGCGCTCATACTTGCTGACGTGGAGGCACTGATACTTGCACTTGTGGAGGCGCTCATACTTGCTGACGTGGATGCACTGGTACTTGCTGACGTGGATGCGCTCATACTTGCTGACGTGGATGCGCTAGTACTTGTTGACGTCGAGGCACTGGTACTGGCACTGGTTGAGGCGCTAGTACTTGCTGACGTGGATGCACTCATTGAGGCGCTAGTACTTGCACTTGTGGAGGCGCTAATACTTGCTGAGGTGGAAGCACTGGTACTGGCACTGGTTGAGGCGCTAGTACTTGCTGACGTGGATGCACTCATTGAGGCGCTTGTGCTGGCTGACGTCGACGCACTCATTGAAGCACTGGTGCTGGCTGACATCGACGCACTCATTGAGGCGCTAGTGCTGGCTGATGTGGATGCACTGGTTGAAGCACTGGTTGAGGCGCTGGTGCTGGCTGACGTCGACGCACTCATGGAAGCGCTGGTGCTGGCTGACGTGGAGGCACTCGTTGAGGCGCTCATACTTGCACTTGTTGAAGCGCTAATACTTGCTGACGTGGAGGCACTTGTGGAAGCACTGGTACTTGCTGA

>NZ_ALRX01000053|1|1|66543-67604|CRT
GACGCTGGTGCTGGCTGA	CGTCGTGGCACTCATTGAAGCGCTAGTGCTGGCTGACATCGAGGCACTTGTTGA
AGCACTTGTGCTGGCTGA	CATTGACGCACTCGTTGAAGCGCTAGTGCTGGCTGACGTCGAGGCACTCATTGA
AGCGCTAGTGCTGGCTGA	CATCGAGGCACTTGTTGAAGAACTTGTGCTGGCTGACATTGACGCACTCGTTGA
GGCGCTAGTGCTGGCTGA	TGTCGATGCACTGGTACTTGCACTTGTGGAAGAACTTGTACTTGCCGATGTTGA
GGCGCTAGTACTTGCTGA	CGTGGAGGCACTCGTACTTGCACTTGTTGA
AGCGCTGGTACTTGCTGA	TGTCGATGCACTCATTGA
GGCGCTAGTACTTGCACT	TGTGGAAGCACTGGTGCTGGCTGACGTCGATGCACTCATTGA
GGCGCTAGTACTTGCTGA	CGTGGAGGCACTCGTACTTGCTGACGTGGA
TGCGCTCATACTTGCTGA	CGTGGAGGCACTGATACTTGCACTTGTGGA
GGCGCTCATACTTGCTGA	CGTGGATGCACTGGTACTTGCTGACGTGGA
TGCGCTCATACTTGCTGA	CGTGGATGCGCTAGTACTTGTTGACGTCGAGGCACTGGTACTGGCACTGGTTGA
GGCGCTAGTACTTGCTGA	CGTGGATGCACTCATTGAGGCGCTAGTACTTGCACTTGTGGA
GGCGCTAATACTTGCTGA	GGTGGAAGCACTGGTACTGGCACTGGTTGA
GGCGCTAGTACTTGCTGA	CGTGGATGCACTCATTGA
GGCGCTTGTGCTGGCTGA	CGTCGACGCACTCATTGAAGCACTGGTGCTGGCTGACATCGACGCACTCATTGA
GGCGCTAGTGCTGGCTGA	TGTGGATGCACTGGTTGAAGCACTGGTTGA
GGCGCTGGTGCTGGCTGA	CGTCGACGCACTCATGGA
AGCGCTGGTGCTGGCTGA	CGTGGAGGCACTCGTTGAGGCGCTCATACTTGCACTTGTTGA
AGCGCTAATACTTGCTGA	CGTGGAGGCACTTGTGGA
AGCACTGGTACTTGCTGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_ALRX01000053.1\|WP_079254701.1\|54780_56319_-\|accessory-Sec-system-protein-Asp2	unknown	unknown	gnl\|CDD\|274739
NZ_ALRX01000053.1\|WP_000818887.1\|76855_77596_+\|amino-acid-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224051
NZ_ALRX01000053.1\|WP_000681006.1\|74672_76856_+\|ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|270337
NZ_ALRX01000053.1\|WP_000567076.1\|71518_73510_-\|excinuclease-ABC-subunit-B	unknown	unknown	gnl\|CDD\|235395
NZ_ALRX01000053.1\|WP_000656279.1\|77744_78095_+\|hypothetical-protein	unknown	unknown	unknown
NZ_ALRX01000053.1\|WP_094754636.1\|73570_74287_-\|CPBP-family-intramembrane-metalloprotease	unknown	unknown	gnl\|CDD\|376806
NZ_ALRX01000053.1\|WP_001263855.1\|59243_60440_-\|SP_1767-family-glycosyltransferase	unknown	unknown	gnl\|CDD\|163440
NZ_ALRX01000053.1\|WP_000244053.1\|80052_81294_+\|aminopeptidase	unknown	unknown	gnl\|CDD\|376723
NZ_ALRX01000053.1\|WP_001868168.1\|60500_61388_-\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|366154
NZ_ALRX01000053.1\|WP_000863865.1\|79746_79875_-\|DUF4044-domain-containing-protein	unknown	unknown	gnl\|CDD\|338651
NZ_ALRX01000053.1\|WP_000795054.1\|61368_62553_-\|glycosyl-transferase-family-8	unknown	unknown	gnl\|CDD\|133037
NZ_ALRX01000053.1\|WP_000468353.1\|56346_57891_-\|accessory-Sec-system-protein-Asp1	unknown	unknown	gnl\|CDD\|293598
NZ_ALRX01000053.1\|WP_000104398.1\|53791_54784_-\|accessory-Sec-system-protein-Asp3	unknown	unknown	gnl\|CDD\|163423
NZ_ALRX01000053.1\|WP_001868155.1\|62542_63784_-\|glycosyl-transferase	unknown	unknown	gnl\|CDD\|133037
NZ_ALRX01000053.1\|WP_000772258.1\|57890_59120_-\|accessory-Sec-system-protein-translocase-subunit-SecY2	unknown	unknown	gnl\|CDD\|237095
NZ_ALRX01000053.1\|WP_000061665.1\|78372_79686_-\|GTPase-ObgE	unknown	unknown	gnl\|CDD\|237046
NZ_ALRX01000053.1\|WP_000502595.1\|78179_78347_-\|hypothetical-protein	unknown	unknown	unknown
NZ_ALRX01000053.1\|WP_000751408.1\|63780_64986_-\|glycosyl-transferase	unknown	unknown	gnl\|CDD\|133037
NZ_ALRX01000053.1\|WP_001263776.1\|64994_66002_-\|sugar-transferase	unknown	unknown	gnl\|CDD\|236626
NZ_ALRX01000053.1\|WP_000571936.1\|69927_71421_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|285470

Protein	Function_ID	Function_description	E-value
NZ_ALRX01000053.1\|WP_079254701.1\|54780_56319_-\|accessory-Sec-system-protein-Asp2	gnl\|CDD\|274739	TIGR03712, acc_sec_asp2, accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis].	0
NZ_ALRX01000053.1\|WP_000818887.1\|76855_77596_+\|amino-acid-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224051	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism].	3.4733e-157
NZ_ALRX01000053.1\|WP_000681006.1\|74672_76856_+\|ABC-transporter-permease-subunit	gnl\|CDD\|270337	cd13619, PBP2_GlnP, Glutamine-binding domain of ABC transporter, a member of the type 2 periplasmic binding fold protein superfamily. Periplasmic glutamine binding domain GlnP serves as an initial receptor in the ABC transport of glutamine in eubacteria. GlnP belongs to the type 2 periplasmic-binding fold protein (PBP2) superfamily, whose members are involved in chemotaxis and uptake of nutrients and other small molecules from the extracellular space as a primary receptor. PBP2 typically comprises of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two receptor cytoplasmically-located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.66452e-106
NZ_ALRX01000053.1\|WP_000567076.1\|71518_73510_-\|excinuclease-ABC-subunit-B	gnl\|CDD\|235395	PRK05298, PRK05298, excinuclease ABC subunit UvrB.	0
NZ_ALRX01000053.1\|WP_094754636.1\|73570_74287_-\|CPBP-family-intramembrane-metalloprotease	gnl\|CDD\|376806	pfam02517, Abi, CAAX protease self-immunity. Members of this family are probably proteases (after a isoprenyl group is attached to the Cys residue in the C-terminal CAAX motif of a protein to attach it to the membrane, the AAX tripeptide being removed by one of the CAAX prenyl proteases). The family contains the CAAX prenyl protease. The proteins contain a highly conserved Glu-Glu motif at the amino end of the alignment. The alignment also contains two histidine residues that may be involved in zinc binding. While they are involved in membrane anchoring of proteins in eukaryotes, little is known about their function in prokaryotes. In some known bacteriocin loci, Abi genes have been found downstream of bacteriocin structural genes where they are probably involved in self-immunity. Investigation of the bacteriocin-like loci in the Gram positive bacteria locus from Lactobacillus sakei 23K confirmed that the bacteriocin-like genes (sak23Kalphabeta) exhibited antimicrobial activity when expressed in a heterologous host and that the associated Abi gene (sak23Ki) conferred immunity against the cognate bacteriocin. Interestingly, the immunity genes from three similar systems conferred a high degree of cross-immunity against each other's bacteriocins, suggesting the recognition of a common receptor. Site-directed mutagenesis demonstrated that the conserved motifs constituting the putative proteolytic active site of the Abi proteins are essential for the immunity function of Sak23Ki - thus a new concept in self-immunity.	4.29505e-12
NZ_ALRX01000053.1\|WP_001263855.1\|59243_60440_-\|SP_1767-family-glycosyltransferase	gnl\|CDD\|163440	TIGR03728, glyco_access_1, glycosyltransferase, SP_1767 family. Members of this protein family are putative glycosyltransferases. Some members are found close to genes for the accessory secretory (SecA2) system, and are suggested by Partial Phylogenetic Profiling to correlate with SecA2 systems. Glycosylation, therefore, may occur in the cytosol prior to secretion.	1.64361e-161
NZ_ALRX01000053.1\|WP_000244053.1\|80052_81294_+\|aminopeptidase	gnl\|CDD\|376723	pfam02073, Peptidase_M29, Thermophilic metalloprotease (M29).	0
NZ_ALRX01000053.1\|WP_001868168.1\|60500_61388_-\|glycosyltransferase-family-2-protein	gnl\|CDD\|366154	pfam00535, Glycos_transf_2, Glycosyl transferase family 2. Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.	1.47167e-33
NZ_ALRX01000053.1\|WP_000863865.1\|79746_79875_-\|DUF4044-domain-containing-protein	gnl\|CDD\|338651	pfam13253, DUF4044, Protein of unknown function (DUF4044). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 42 and 56 amino acids in length. There is a single completely conserved residue M that may be functionally important.	1.85741e-06
NZ_ALRX01000053.1\|WP_000795054.1\|61368_62553_-\|glycosyl-transferase-family-8	gnl\|CDD\|133037	cd04194, GT8_A4GalT_like, A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The members of this family of glycosyltransferases catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The enzymes exhibit broad substrate specificities. The known functions found in this family include: Alpha-1,4-galactosyltransferase, LOS-alpha-1,3-D-galactosyltransferase, UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase, UDP-galactose: (glucosyl) LPS alpha1,2-galactosyltransferase, and UDP-glucose:(glucosyl) LPS alpha1,2-glucosyltransferase. Alpha-1,4-galactosyltransferase from N. meningitidis adds an alpha-galactose from UDP-Gal (the donor) to a terminal lactose (the acceptor) of the LOS structure of outer membrane. LOSs are virulence factors that enable the organism to evade the immune system of host cells. In E. coli, the three alpha-1,2-glycosyltransferases, that are involved in the synthesis of the outer core region of the LPS, are all members of this family. The three enzymes share 40 % of sequence identity, but have different sugar donor or acceptor specificities, representing the structural diversity of LPS.	2.43618e-73
NZ_ALRX01000053.1\|WP_000468353.1\|56346_57891_-\|accessory-Sec-system-protein-Asp1	gnl\|CDD\|293598	pfam16993, Asp1, Accessory Sec system protein Asp1. Asp1, along with SecY2, SecA2, and other proteins forms part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. Asp1 is predicted to be cytosolic.	0
NZ_ALRX01000053.1\|WP_000104398.1\|53791_54784_-\|accessory-Sec-system-protein-Asp3	gnl\|CDD\|163423	TIGR03711, acc_sec_asp3, accessory Sec system protein Asp3. This protein is designated Asp3 because, along with SecY2, SecA2, and other proteins it is part of the accessory Sec system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis].	1.61183e-61
NZ_ALRX01000053.1\|WP_001868155.1\|62542_63784_-\|glycosyl-transferase	gnl\|CDD\|133037	cd04194, GT8_A4GalT_like, A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The members of this family of glycosyltransferases catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The enzymes exhibit broad substrate specificities. The known functions found in this family include: Alpha-1,4-galactosyltransferase, LOS-alpha-1,3-D-galactosyltransferase, UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase, UDP-galactose: (glucosyl) LPS alpha1,2-galactosyltransferase, and UDP-glucose:(glucosyl) LPS alpha1,2-glucosyltransferase. Alpha-1,4-galactosyltransferase from N. meningitidis adds an alpha-galactose from UDP-Gal (the donor) to a terminal lactose (the acceptor) of the LOS structure of outer membrane. LOSs are virulence factors that enable the organism to evade the immune system of host cells. In E. coli, the three alpha-1,2-glycosyltransferases, that are involved in the synthesis of the outer core region of the LPS, are all members of this family. The three enzymes share 40 % of sequence identity, but have different sugar donor or acceptor specificities, representing the structural diversity of LPS.	1.11025e-74
NZ_ALRX01000053.1\|WP_000772258.1\|57890_59120_-\|accessory-Sec-system-protein-translocase-subunit-SecY2	gnl\|CDD\|237095	PRK12417, secY, preprotein translocase subunit SecY; Reviewed.	5.20142e-162
NZ_ALRX01000053.1\|WP_000061665.1\|78372_79686_-\|GTPase-ObgE	gnl\|CDD\|237046	PRK12297, obgE, GTPase CgtA; Reviewed.	0
NZ_ALRX01000053.1\|WP_000751408.1\|63780_64986_-\|glycosyl-transferase	gnl\|CDD\|133037	cd04194, GT8_A4GalT_like, A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The members of this family of glycosyltransferases catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The enzymes exhibit broad substrate specificities. The known functions found in this family include: Alpha-1,4-galactosyltransferase, LOS-alpha-1,3-D-galactosyltransferase, UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase, UDP-galactose: (glucosyl) LPS alpha1,2-galactosyltransferase, and UDP-glucose:(glucosyl) LPS alpha1,2-glucosyltransferase. Alpha-1,4-galactosyltransferase from N. meningitidis adds an alpha-galactose from UDP-Gal (the donor) to a terminal lactose (the acceptor) of the LOS structure of outer membrane. LOSs are virulence factors that enable the organism to evade the immune system of host cells. In E. coli, the three alpha-1,2-glycosyltransferases, that are involved in the synthesis of the outer core region of the LPS, are all members of this family. The three enzymes share 40 % of sequence identity, but have different sugar donor or acceptor specificities, representing the structural diversity of LPS.	2.10249e-70
NZ_ALRX01000053.1\|WP_001263776.1\|64994_66002_-\|sugar-transferase	gnl\|CDD\|236626	PRK09814, PRK09814, sugar transferase.	1.32907e-150
NZ_ALRX01000053.1\|WP_000571936.1\|69927_71421_+\|hypothetical-protein	gnl\|CDD\|285470	pfam08270, PRD_Mga, M protein trans-acting positive regulator (MGA) PRD domain. Mga is a DNA-binding protein that activates the expression of several important virulence genes in group A streptococcus in response to changing environmental conditions. This corresponds to the PRD like region.	4.17206e-24

>NZ_ALRX01000053.1|WP_001263776.1|64994_66002_-|sugar-transferase
MRVHITSIYGQSPRSIALISQKLVKDVGRQLGYDEMGIYFYNDHAETHGERSTRMDGIIAGLGRGDIVVFQVPTWNSTEFDELFLDKLQAYGARIITFVHDIVPLMFESNFYLLDRVIDMYNRSDVVILPTKAMHDYLIEKGMTTSKVLYQEVWDHPVNIDLPRPECQKVLSFAGDIQRFPFVNDWKENIPLIYYGDGSRLNSEANVHAQGWKDDVELMLSLSKRGGFGLCWSEDREELVERRYSRMNASYKLSTFLAAGLPIIANHDISSRDFIKQHGLGFTVETLEEAVEKINNMEKETYDSYVENVEKIATLLRNGYITKKLLIDAVHMLYR
>NZ_ALRX01000053.1|WP_000751408.1|63780_64986_-|glycosyl-transferase
MKKTIVLGADFQYRDQVMTTIKSIVSHNQHLTIYIINTDFPVEWFNILNHSLEQFDCRVKNIPISSDVFEGIPTLSHISVAGFFRWFIPIHLEEEIVLYLDSDVIVRGSLDPLFDINLEENLLGAVADHFSTLYYGDTAPVSFNSGVMLINNSLWKKEEIYNSLMRIADKGSAVGVGDQEYLNILTQNRWIDIGKQYNVQIGQDVNINAYGRPDLYHFYDDCEPVIVHYNSQDKPWNKYSQSRYRSEWWYYFGLEWSVIYAQQQKNLNRLTGKTLNLFTLTASDTLEHIEVLAKALPDYQFHIAARSDISEKLANLETYSNIKVYKLVINPILEELIRNCDVYLDINHSYEVEGILDKIKEENKPILAFDSTAHTTKNIEVISETMPELMVKRIREVGPLR
>NZ_ALRX01000053.1|WP_001868155.1|62542_63784_-|glycosyl-transferase
MKNRKAIALAADFGYQEQVKTIIKSICFHNQFIDFYILNDDFPVEWFQMMEYHLSKMDCTISNTKIFNEEIKHFKFQKPMPYPTYFRYFIPEVIHEDKVLYLDCDMIITSDLTSIFTLDISKYGVAAVRDDLLEEYDGKEDYFNSGLLLINNIFWREQGFSQRLLDYTRENQGALQYHDQDVLNDVLCDNWLELDETYNYHTGADMLYNLFQQSERQLNRRKDLPKVIHYTATKPWKYLETSVRWRDIWWEYNRLEWRDIFTRWQVNDGVDVSLKKVLQPIHRAFIFTYSDSIEGIERLAKDLPNWQFHIAAYTQISEKLKQLEMHSNIKLYPLVYRFKLNELVENSDIYLDINHGDADTQVLEQVKKLGKDILSLSTTYHGQGKQFERVTDIIDYLKNERFKEHIRKEYCEK
>NZ_ALRX01000053.1|WP_000795054.1|61368_62553_-|glycosyl-transferase-family-8
MKNNVICLAGDNKSLNQIQTVIKSILCHNDRVSIYILNQDIASEWFRNIQRRLLNSHSCIFDIKLFDDTFKEFKTPRAHITYMAYARYYIPQLIDAEKVLYLDIDTLVVDNLDKLFEIELGDYPIAAILDGDGIHFNSGVMLINSLYWMRYRVTEKLMEITERELDNGIFGDQGVLNLLFDNNWLKLEDKYNAQVGNDLGAFYENWQGYFDRNFESPTIIHYCTHDKPWNTFSSSRFRETWWQYEQLDWNEVFNFETYLLPEPTFEKHFFTFTTSVDLLYIEELVELFPNSCFHIAAWTSFGPSLLKLATNSNVRLYPSITSPLFEQLMTKANYYLDISTSWKEIQFCQKAIEKSIPILSFNEAVTFEYRELSHCFINLEDMRQFLCKNGGNSD
>NZ_ALRX01000053.1|WP_001868168.1|60500_61388_-|glycosyltransferase-family-2-protein
MEAIVTDKLVSVIIPVYNAAPYLEGCVNTILGQTYQVFEILLIDDGSTDTSASICDQLSLRDNRIRVFHIENGGASKARNFGLARISSESQFVTFVDSDDWVKENYLEVLLAQQEKYNADIVISNYYIYRETEDIFGYYITDKDFVIEEISAQTAIDRQVHWHLNSSVFIVIWGKLYRRELFDTITFPIDKVFEDELVSVLLFIKSKKTILVNGSYYGYRIRPNSIMTSAFSSKRAEDLIYIFDSKLSEIILSGLDSTATVERYFWLMRDYKQRLEQENLQKTIIYKVISNRLSR
>NZ_ALRX01000053.1|WP_001263855.1|59243_60440_-|SP_1767-family-glycosyltransferase
MRVIKVKTISETLDYISKHTASVARFGDGEIDIIAGNSIPYQVYDSELAKRLKRLLNRQSNEKLVICVSDVFDNLGRYNDFSQQFWRGHLYQYNDLYQKNCQAEWYGSTFISRPYMDLLDKSLSVTYFEQLKALWKNKDILIVEGETSRSGVGNDLFNDANTISRIICPSKDAFSSFYEIKETILEHSRGKLILLMLGPTAKLLAEDLSQLGHQAIDLGHIDSEYEWFKMGAVSKVKLSHKHTAEHNFDEDITLIEDNSYENQIVSKIGTSDRQYALTVTLTDDIWELEHLLQRCPNTDFHIAAPVYCSDRLKQLVGYPNYYLHEAITEEQFEVLLLNSDIYLDINHGEEVWNVVDRCITEGKTIYGIRRARKDNQYISFERTMDDFEYLCDTIKQNR
>NZ_ALRX01000053.1|WP_000772258.1|57890_59120_-|accessory-Sec-system-protein-translocase-subunit-SecY2
MKLLYIFEKNIILRKILITFSLIIIFLLGRYVPIPGVLISAYKGQDNNFATLYSTVTGGNLSQVGVFSLGIGPMMTTMILLRLFTIGKYSSGVSQKVQQFRQNVVMLVIAIIQGLAIAISFQYHNGFSLTKLLLATMILVTGAYIISWIGNLNAEYGFGGMTILVVVGMLVGQFNNIPLIFELFQDGYQLAIILFLLWTLVAMYLMITFERSEYRIPVMRTSIHNRLVDDAYMPIKVNASGGMAFMYVYTLLMFPQYIIILLRSIFPTNPDITSYNDYFSLSSIQGVVIYMILMLVLSVAFTFVNIDPTKISEAMRESGDFIPNYRPGKETQSYLSKICYLFGTFSGFFMAFLGGVPLLFALGNDNLRTVSSMTGIFMMITGMSFMILDEFQVIRIRKQYTSVFENEEN
>NZ_ALRX01000053.1|WP_000468353.1|56346_57891_-|accessory-Sec-system-protein-Asp1
MFHFIPSWYNENRTWYDNNYLWYFKPTNVGFDDTINQMKMFDYAGKESRLVVLNYMPNLRYYLHRYDLLESGYYSVFDDIQEIGNVRQQMIDFRQLNWPEGVDFTYTPFIVLVKKSGDLIAKVQFGEEGNLTHIDYFANEQIAKKYLFDDRGFLSSILYYDNGGEAYQDYLASSGERIMREYLREGDHHVEINPKKAIHFLKLSYSDIEELIREKYLTYLHKEVSKSDTIIASFNQVHNAFIVGNTSKGNLILSVFSERNNAHNVLEDYSSLSRADAIICDRLDIAAQLKEKIDKPVVHVSPFDTRLALGKSNQVRDLEIYFVIDRLSHKELQKSLTSLYKVMLKNNDIKVTFVSYEREFESRQLTYDYLKEATKVFDQKFFSLSDDDANQVLMQSDEVEKEKTRLSFTHPLSETDIINRLEYVRLIIDISKIPDLYTQIAGISSGIPQINTILTEFVEHRKNGYVIEEIQELEKAIPYYCEQLTNWNRSLIYSVDKINDYTGGQLVERIINSY
>NZ_ALRX01000053.1|WP_079254701.1|54780_56319_-|accessory-Sec-system-protein-Asp2
MLQVGEENWATKENIPNDMEWLFIKPDQISDFVTTENNYLTSSKLLQKLPRKISALLLTEQTYGPELSSLSSFFEVYEVFYPKDKHATGITEEFLRSKMAQRYDSSSPAQLIRQFYKGLFIGQYGEKLQVSQIQIRNDFEGVVNYQGNNYLELEGQFGEDYSFLLNFAYNIPFSSDFYNELFLEHIIEGDIDIRLVISLIVDGSVDDIAKEWYFEKEDLNQLISLESDISGSLAVKLFAKGKGIIKLGPLHRRNGRGGLGTFLLGGERHIDAIGHEFMTYFDPVDFKPPLTVYFSGFRSAEGFEGFWMMKSMKTPFMLICDPRLQGGAFYIGSKEYEQKIVDAIQEKLAFLNFSSDQLILSGLSMGTYGATYHGAKLNPHAIIIGKPIFNLGTVAQRERLERPDGFATSLDIQLLNQGDLTSSSSEKLNNLFWKSIEEGDFSNTTFALAYMKNDDYDATAFSDLLQYFRGKKHKILGRGWDGRHGDCSAEVGAWFTSQYRRMLSNDFGRKEE
>NZ_ALRX01000053.1|WP_000104398.1|53791_54784_-|accessory-Sec-system-protein-Asp3
MSTISYIYWDDFSRFSYNFGTKLQFLGKSVCFENPLAPSSTNLYTWSSQTNYQSKRISPNLPLLRKGTRYSLSLNAELDLVGSLFVRIEFYNRFNESIGFELLKKDSIIFIYPKEAYTYTISLINAGCSDFTFHYLKLEEVTDSVIQEKNLSTEFTIEEHQDVFNLLLVEKKDSVYINKIESISQLQQKVELVSNPSLNSDSLILPELEKGLEDALKVFPNIKINVIAYGTQGNFAALYYAKKFPRITAYINDCFAPFGILLKSLPHLTAKQQIFLREVWDTRETSPNVKHYGLVSENSSLNLVSMILSGNEHLPYLTLLKKQDDNYDSL
>NZ_ALRX01000053.1|WP_000571936.1|69927_71421_+|hypothetical-protein
MIENFLEKNILNKVKLLTLCYDTPSLSLDTACNRLHLSPVELKNYCHKLNVLFGHKLSIHIQKERILCKLNKLTQEDALKIVYNESNALQLLKFLIDDSSDKKSLVAFGNDLFLSRSSVYRLRENLIPLIKDLGLSLSKNTIVGDEYRIRYLIAYLTTKFGIKIYDLSALDIKIIRQFLFESGTNIRPTTHLSDIFIFFDTLFILTWKRHHHKVKIPNSKLFSSLKKIFIYEELNTCVKSIVQPYFNVIFNSEDMDYIFLIYLTSANSFAAQKWTETHVDEVLAIFKSLPKFQMLLQPLKEALPYSDTYYDELVKVTIYFSRNFIVGLNQLIPETISFPSTFYPGNPKLIPIIEPIVTHWLTEIGESTLKKQHFFLFCAHLERVIKNNMPPIRVVLLTTDFINNQIFKDYLLQSLSLEKINFHSYYLLRDNVSQVSTLKPDLIITDQKLVPYVTKELATNSLVAHIDYNDTPSQISNIQTIISNIKEEKYRKIFDKI
>NZ_ALRX01000053.1|WP_000567076.1|71518_73510_-|excinuclease-ABC-subunit-B
MIDRKDTNRFKLVSKYSPSGDQPQAIETLVDNIEGGEKAQILKGATGTGKTYTMSQVIAQVNKPTLVIAHNKTLAGQLYGEFKEFFPDNAVEYFVSYYDYYQPEAYVPSSDTYIEKDSSVNDEIDKLRHSATSSLLERNDVIVVASVSCIYGLGSPKEYADSVVSLRPGQEISRDQLLNNLVDIQFERNDIDFQRGKFRVRGDVVEVFPASRDEHAFRIEFFGDEIDRIREIESLTGRVLGEVEHLAIFPATHFMTNDEHMEEAISKIQAEMENQVELFEKEGKLIEAQRIRQRTEYDIEMLREMGYTNGVENYSRHMDGRSEGEPPFTLLDFFPEDFLIMIDESHMTMGQIKGMYNGDRSRKEMLVNYGFRLPSALDNRPLRREEFESHVHQIVYVSATPGDYEMGQTDTVVEQIIRPTGLLDPEVEVRPSMGQMDDLLGEINLRTEKGERTFITTLTKRMAEDLTDYLKEMGVKVKYMHSDIKTLERTEIIRDLRLGVFDVLIGINLLREGIDVPEVSLVAILDADKEGFLRNERGLIQTIGRAARNSNGHVIMYADKITDSMQRAMDETARRRRLQMDYNEKHGIVPQTIKKEIRDLIAITKSNDSDKPEKVVDYSSLSKKERQAEIKALQKQMQEAAELLDFELAAQIRDVILKLQAID
>NZ_ALRX01000053.1|WP_094754636.1|73570_74287_-|CPBP-family-intramembrane-metalloprotease
MYGELGTFSFSAFLLLIWVKFVEKRPFSELGFSTKFKRTLWSLIKGWSIGFILFSISVITAYILGGLDFHSYDVSKATIFYVVTLLPFWLIQSGTEELLTRGWLLPLINHRFHLAVAIGVSSTLFGILHLVNAHVTFLSIVSIICSGVLMSLYMIKSGNIWSVAALHGAWNFSQGNLYGIAVSGQKAGASLLHFTVKENAPDWISGGAFGIEGSLISIFVLLAAIIYLLWLIKTEETD
>NZ_ALRX01000053.1|WP_000681006.1|74672_76856_+|ABC-transporter-permease-subunit
MKHKLKAFTLALLSIFFVFGGKVSAETVNIVSDTAYAPFEFKDSDQTYKGIDVDIVNEVAKRAGWNVNMTYPGFDAAVNAVQSGQADALMAGTTVTEARKKVFNFSDTYYDTSVILYTKNNNKVTNYKQLKGKVVGVKNGTAAQSFLEENKSKYGYKVKTFDTSDLMNNSLDSGSIYAAMDDQPVVQFAINQGKAYAINMEGEAVGSFAFAVKKGSGHDNLIKEFNTAFAQMKSDGTYNDIMDKWLGKDATKTSGKATGNANEKATPVKPSYKIVSDSSFAPFEYQNGKGKYTGFDMELIKKIAKQQGFKLDISNPGFDAALNAVQSGQADGVIAGATITEARQKIFDFSDPYYTSSVILAVKKGSNVKSYQDLKGKTVGAKNGTASYTWLSDHADKYNYHVKAFDEASTMYDSMNSGSIDALMDDEAVLAYAINQGRKFETPIKGEKSGDIGFAVKKGANPELIKMFNNGLASLKKSGEYDKLVKKYLSTASTSSNDKAAKPVDESTILGLISNNYKQLLSGIGTTLSLTLISFAIAMVIGIIFGMMSVSPSNTLRTISMIFVDVVRGIPLMIVAAFIFWGIPNLIESITGHQSPINDFVAATIALSLNGGAYIAEIVRGGIEAVPSGQMEASRSLGISYGKTMQKVILPQAVRLMLPNFINQFVISLKDTTIVSAIGLVELFQTGKIIIARNYQSFRMYAILAIMYLVIITLLTRLAKRLEKRLK
>NZ_ALRX01000053.1|WP_000818887.1|76855_77596_+|amino-acid-ABC-transporter-ATP-binding-protein
MAELKIDVQDLHKSYGQNEVLKGIDAKFYEGDVVCIIGPSGSGKSTFLRTLNLLESITSGKVVVDGFELSNPKTDIDKARENIGMVFQHFNLFPHMSVLENITFAPIELGKESKEAAEKHGMELLEKVGLADKANAKPDSLSGGQKQRVAIARSLAMNPDILLFDEPTSALDPEMVGDVLNVMKDLAEQGMTMLIVTHEMGFARQVANRVIFTDGGRFLEDGTPEQIFDTPQHPRLQDFLNKVLNV
>NZ_ALRX01000053.1|WP_000656279.1|77744_78095_+|hypothetical-protein
MKDYINRILHFIKEHMTYHVNFIDDFLDIKWEKVSNIHLRFWTTIIAYLVIFILSISTVILNLVLLFQGFLTQNPIIYLLFFITLVCAFYFAYKFITYTPTIVKNALQYIKKLKNV
>NZ_ALRX01000053.1|WP_000502595.1|78179_78347_-|hypothetical-protein
MGDKPISFRDKDGNFVSAADVWNAEKLEELFNTLNPNRKLRLEREKLAKEKRIVK
>NZ_ALRX01000053.1|WP_000061665.1|78372_79686_-|GTPase-ObgE
MSMFLDTAKISVKAGRGGDGMVAFRREKYVPNGGPWGGDGGKGGSVIFKVNEGLRTLMDFRYNRNFKAKAGEKGMTKGMHGRGAEDLIVSLPPGTTVRDATTGKVITDLVEHDQEFVVARGGRGGRGNIRFATPRNPAPEIAENGEPGEERELQLELKILADVGLVGFPSVGKSTLLSVVSAAKPKIGAYHFTTIVPNLGMVRTKSGDSFAMADLPGLIEGASQGVGLGTQFLRHIERTRVILHVIDMSASEGRDPYDDYVSINNELETYNLRLMERPQIIVANKMDMPDSEENLAAFKEKLAANYDEFDDMPMIFPISSLAHQGLENLMDATAELLANTEEFLLYDETDMQEDEAYYGFNEDERPFEITRDDDATWVLYGDKLEKLFVMTNMERDESIMKFARQLRGMGVDEALRERGAKDGDIVRIGNFEFEFVD
>NZ_ALRX01000053.1|WP_000863865.1|79746_79875_-|DUF4044-domain-containing-protein
MAFGDNGQRKKTGFEKLTLFVVILMVLVTVGGLVFGAISAIM
>NZ_ALRX01000053.1|WP_000244053.1|80052_81294_+|aminopeptidase
MVLQDFDNLLKKYAQLIISQGLNVQKGHTLALTIDVEQVHLARLLTEAAYEKGASEVIVDYTDDFITRQRLLHASDEVLTNVPQYTVDKSLALLNKKASRLVVKSSNPNAFATVDPKRLSETTRATAIALEEQSRAIQANKVSWNVAAAAGREWAALVFPELKTSDQQVDALWDTIFKLNRIYEDDPIAAWDAHEAKLLEKATRLNQEQFDALHYTAPGTDLTLGMPKNHIWEAAGSLNAQGETFIANMPTEEIFSAPDYRRADGYVTSTKPLSYAGVIIENMMFTFKDGKIINVTAEKGQETIQRLIEENDGARSLGEVALVPHKTPISLSGLIFFNTLFDENASNHLAIGSAYAFNVEGGTEMTSQELDEAGLNRSSTHVDFMIGSEQMDIDGIRADGTAVPIFRNGEWAI

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_ALRX01000053_1	1.6\|66897\|18\|NZ_ALRX01000053\|CRT	66897-66914	18	NZ_ALRX01000053.1	66525-66542	1	0.944

1. spacer 1.6|66897|18|NZ_ALRX01000053|CRT matches to position: 66525-66542, mismatch: 1, identity: 0.944

tgtcgatgcactcattga	CRISPR spacer
tgtcgatgcactcgttga	Protospacer
*************.****

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_ALRX01000053_1	1.10\|67089\|30\|NZ_ALRX01000053\|CRT	67089-67118	30	NC_019418	Streptococcus phage phiNJ2, complete genome	30961-30990	5	0.833
NZ_ALRX01000053_1	1.16\|67425\|30\|NZ_ALRX01000053\|CRT	67425-67454	30	NC_049380	Vibrio phage JSF3, complete genome	68190-68219	6	0.8
NZ_ALRX01000053_1	1.16\|67425\|30\|NZ_ALRX01000053\|CRT	67425-67454	30	NC_049350	Vibrio phage VCO139, complete genome	415-444	6	0.8
NZ_ALRX01000053_1	1.16\|67425\|30\|NZ_ALRX01000053\|CRT	67425-67454	30	NC_021540	Vibrio phage JA-1, complete genome	415-444	6	0.8
NZ_ALRX01000053_1	1.13\|67269\|30\|NZ_ALRX01000053\|CRT	67269-67298	30	NZ_CP021643	Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence	69394-69423	7	0.767
NZ_ALRX01000053_1	1.10\|67089\|30\|NZ_ALRX01000053\|CRT	67089-67118	30	KC171647	Lactobacillus phage PL-1, complete genome	32832-32861	8	0.733
NZ_ALRX01000053_1	1.10\|67089\|30\|NZ_ALRX01000053\|CRT	67089-67118	30	KX879752	Halomonas phage QHHSV-1, complete genome	11010-11039	8	0.733
NZ_ALRX01000053_1	1.10\|67089\|30\|NZ_ALRX01000053\|CRT	67089-67118	30	NC_022756	Lactobacillus phage J-1, complete genome	34883-34912	8	0.733
NZ_ALRX01000053_1	1.5\|66849\|30\|NZ_ALRX01000053\|CRT	66849-66878	30	MN694468	Marine virus AFVG_250M452, complete genome	1274-1303	9	0.7
NZ_ALRX01000053_1	1.5\|66849\|30\|NZ_ALRX01000053\|CRT	66849-66878	30	MN694239	Marine virus AFVG_250M451, complete genome	26295-26324	9	0.7
NZ_ALRX01000053_1	1.16\|67425\|30\|NZ_ALRX01000053\|CRT	67425-67454	30	NZ_CP032832	Klebsiella pneumoniae strain INF078 plasmid pINF078-VP, complete sequence	326169-326198	9	0.7

1. spacer 1.10|67089|30|NZ_ALRX01000053|CRT matches to NC_019418 (Streptococcus phage phiNJ2, complete genome) position: , mismatch: 5, identity: 0.833

cgtggatgcactggtacttgctgacgtgga	CRISPR spacer
aatggatgcactggtacttgctgaatttga	Protospacer
 .**********************  * **

2. spacer 1.16|67425|30|NZ_ALRX01000053|CRT matches to NC_049380 (Vibrio phage JSF3, complete genome) position: , mismatch: 6, identity: 0.8

tgtggatgcactggttgaagcactggttga	CRISPR spacer
tttagttgaactggttgaatcactggttgc	Protospacer
* *.* ** ********** *********

3. spacer 1.16|67425|30|NZ_ALRX01000053|CRT matches to NC_049350 (Vibrio phage VCO139, complete genome) position: , mismatch: 6, identity: 0.8

tgtggatgcactggttgaagcactggttga	CRISPR spacer
tttagttgaactggttgaatcactggttgc	Protospacer
* *.* ** ********** *********

4. spacer 1.16|67425|30|NZ_ALRX01000053|CRT matches to NC_021540 (Vibrio phage JA-1, complete genome) position: , mismatch: 6, identity: 0.8

tgtggatgcactggttgaagcactggttga	CRISPR spacer
tttagttgaactggttgaatcactggttgc	Protospacer
* *.* ** ********** *********

5. spacer 1.13|67269|30|NZ_ALRX01000053|CRT matches to NZ_CP021643 (Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence) position: , mismatch: 7, identity: 0.767

ggtggaagcactggtactggcactggttga	CRISPR spacer
agtggtagcactggcactggcactggcgat	Protospacer
.**** ********.***********. .

6. spacer 1.10|67089|30|NZ_ALRX01000053|CRT matches to KC171647 (Lactobacillus phage PL-1, complete genome) position: , mismatch: 8, identity: 0.733

cgtggatgcactggtacttgctgacgtgga	CRISPR spacer
atatgatgcactggtaattgctgactatga	Protospacer
    ************ ********   **

7. spacer 1.10|67089|30|NZ_ALRX01000053|CRT matches to KX879752 (Halomonas phage QHHSV-1, complete genome) position: , mismatch: 8, identity: 0.733

cgtggatgcactggtacttgctgacgtgga	CRISPR spacer
ctaccgggcgctggttcttgctgacgtgga	Protospacer
*    . **.***** **************

8. spacer 1.10|67089|30|NZ_ALRX01000053|CRT matches to NC_022756 (Lactobacillus phage J-1, complete genome) position: , mismatch: 8, identity: 0.733

cgtggatgcactggtacttgctgacgtgga	CRISPR spacer
atatgatgcactggtaattgctgactatga	Protospacer
    ************ ********   **

9. spacer 1.5|66849|30|NZ_ALRX01000053|CRT matches to MN694468 (Marine virus AFVG_250M452, complete genome) position: , mismatch: 9, identity: 0.7

-------cgtggaggcactcgtacttgcacttgttga	CRISPR spacer
tcatctcc-------cactcgtacttgcacttgctgc	Protospacer
       *       ******************.**

10. spacer 1.5|66849|30|NZ_ALRX01000053|CRT matches to MN694239 (Marine virus AFVG_250M451, complete genome) position: , mismatch: 9, identity: 0.7

cgtggagg-------cactcgtacttgcacttgttga	CRISPR spacer
-------gcatctcccactcgtacttgcacttgctgc	Protospacer
       *       ******************.**

11. spacer 1.16|67425|30|NZ_ALRX01000053|CRT matches to NZ_CP032832 (Klebsiella pneumoniae strain INF078 plasmid pINF078-VP, complete sequence) position: , mismatch: 9, identity: 0.7

tgtggatgcactggttgaagcactggttga	CRISPR spacer
cctggatgcactggttgcaggactgaaact	Protospacer
. *************** ** ****.

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

157597 : 168331

Streptococcus_phage(84.62%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000767485.1\|157597_158425_+	exodeoxyribonuclease III	M1PSC0	Streptococcus_phage	5.1e-125	78.4
WP_000287943.1\|158465_158822_-	arsenate reductase family protein	M1PLC0	Streptococcus_phage	5.2e-42	72.6
WP_000966772.1\|158823_159300_-	methylated-DNA--[protein]-cysteine S-methyltransferase	M1PFU9	Streptococcus_phage	7.1e-39	50.9
WP_000232152.1\|159356_160538_-	phosphoglycerate dehydrogenase	M1NSB9	Streptococcus_phage	1.1e-168	75.3
WP_001167085.1\|160600_161149_-	acetyltransferase	M1PSC3	Streptococcus_phage	1.1e-54	58.4
WP_000158399.1\|161216_162308_-	3-phosphoserine/phosphohydroxythreonine transaminase	M1Q1P2	Streptococcus_phage	1.7e-165	78.0
WP_000603275.1\|162440_163076_+	copper homeostasis protein CutC	NA	NA	NA	NA
WP_001868293.1\|163119_163224_-	hypothetical protein	NA	NA	NA	NA
WP_079254703.1\|163208_163370_+	hypothetical protein	NA	NA	NA	NA
WP_001868299.1\|163345_164209_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	M1PLC5	Streptococcus_phage	3.7e-110	70.7
WP_000358198.1\|164214_164541_-	DNA replication initiation control protein YabA	M1PFV3	Streptococcus_phage	3.2e-30	61.1
WP_000364568.1\|164571_165435_-	DNA polymerase III subunit delta'	M1NSC1	Streptococcus_phage	2.5e-74	50.0
WP_000715594.1\|165454_166090_-	dTMP kinase	M1PSC7	Streptococcus_phage	1.4e-66	60.1
WP_001144246.1\|166178_166838_-	CBS domain-containing protein	M1NSC5	Streptococcus_phage	4.7e-65	56.5
WP_000178141.1\|166856_167567_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.6e-13	26.0
WP_001185985.1\|167566_168331_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	2.6e-14	24.8

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage