CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_ALUF01000043	Streptococcus agalactiae GB00888 ctg7180000005239, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALUF01000001	Streptococcus agalactiae GB00888 ctg7180000005197, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALUF01000037	Streptococcus agalactiae GB00888 ctg7180000005233, whole genome shotgun sequence	0 crisprs	cas3	0	0	0	0
NZ_ALUF01000005	Streptococcus agalactiae GB00888 ctg7180000005201, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALUF01000042	Streptococcus agalactiae GB00888 ctg7180000005238, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALUF01000020	Streptococcus agalactiae GB00888 ctg7180000005216, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALUF01000021	Streptococcus agalactiae GB00888 ctg7180000005217, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALUF01000041	Streptococcus agalactiae GB00888 ctg7180000005237, whole genome shotgun sequence	0 crisprs	NA	0	0	1	0
NZ_ALUF01000017	Streptococcus agalactiae GB00888 ctg7180000005213, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALUF01000013	Streptococcus agalactiae GB00888 ctg7180000005209, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALUF01000027	Streptococcus agalactiae GB00888 ctg7180000005223, whole genome shotgun sequence	1 crisprs	cas9,cas1,cas2,csn2	1	22	0	0
NZ_ALUF01000034	Streptococcus agalactiae GB00888 ctg7180000005230, whole genome shotgun sequence	0 crisprs	NA	0	0	1	0
NZ_ALUF01000012	Streptococcus agalactiae GB00888 ctg7180000005208, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALUF01000002	Streptococcus agalactiae GB00888 ctg7180000005198, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALUF01000022	Streptococcus agalactiae GB00888 ctg7180000005218, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALUF01000019	Streptococcus agalactiae GB00888 ctg7180000005215, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALUF01000032	Streptococcus agalactiae GB00888 ctg7180000005228, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALUF01000025	Streptococcus agalactiae GB00888 ctg7180000005221, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALUF01000015	Streptococcus agalactiae GB00888 ctg7180000005211, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALUF01000031	Streptococcus agalactiae GB00888 ctg7180000005227, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALUF01000035	Streptococcus agalactiae GB00888 ctg7180000005231, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALUF01000009	Streptococcus agalactiae GB00888 ctg7180000005205, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALUF01000007	Streptococcus agalactiae GB00888 ctg7180000005203, whole genome shotgun sequence	0 crisprs	csa3,cas3	0	0	3	0
NZ_ALUF01000028	Streptococcus agalactiae GB00888 ctg7180000005224, whole genome shotgun sequence	0 crisprs	NA	0	0	0	1
NZ_ALUF01000023	Streptococcus agalactiae GB00888 ctg7180000005219, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALUF01000018	Streptococcus agalactiae GB00888 ctg7180000005214, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALUF01000029	Streptococcus agalactiae GB00888 ctg7180000005225, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALUF01000040	Streptococcus agalactiae GB00888 ctg7180000005236, whole genome shotgun sequence	0 crisprs	NA	0	0	1	0
NZ_ALUF01000014	Streptococcus agalactiae GB00888 ctg7180000005210, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALUF01000010	Streptococcus agalactiae GB00888 ctg7180000005206, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALUF01000004	Streptococcus agalactiae GB00888 ctg7180000005200, whole genome shotgun sequence	0 crisprs	NA	0	0	1	0
NZ_ALUF01000038	Streptococcus agalactiae GB00888 ctg7180000005234, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALUF01000030	Streptococcus agalactiae GB00888 ctg7180000005226, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALUF01000024	Streptococcus agalactiae GB00888 ctg7180000005220, whole genome shotgun sequence	0 crisprs	NA	0	0	1	0
NZ_ALUF01000039	Streptococcus agalactiae GB00888 ctg7180000005235, whole genome shotgun sequence	0 crisprs	DinG	0	0	0	0
NZ_ALUF01000006	Streptococcus agalactiae GB00888 ctg7180000005202, whole genome shotgun sequence	0 crisprs	NA	0	0	1	0
NZ_ALUF01000026	Streptococcus agalactiae GB00888 ctg7180000005222, whole genome shotgun sequence	0 crisprs	DEDDh	0	0	0	0
NZ_ALUF01000033	Streptococcus agalactiae GB00888 ctg7180000005229, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALUF01000003	Streptococcus agalactiae GB00888 ctg7180000005199, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALUF01000016	Streptococcus agalactiae GB00888 ctg7180000005212, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALUF01000011	Streptococcus agalactiae GB00888 ctg7180000005207, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALUF01000036	Streptococcus agalactiae GB00888 ctg7180000005232, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALUF01000008	Streptococcus agalactiae GB00888 ctg7180000005204, whole genome shotgun sequence	0 crisprs	csm6	0	0	0	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

55 : 4919

Streptococcus_phage(83.33%)

integrase

attL 1970:1982|attR 4660:4672

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001227347.1\|55_409_-	helix-turn-helix transcriptional regulator	A0A1S5SFA6	Streptococcus_phage	1.3e-58	100.0
WP_013670292.1\|613_685_+	hypothetical protein	NA	NA	NA	NA
WP_000804884.1\|913_1336_+	sigma-70 family RNA polymerase sigma factor	A0A1S5SEW0	Streptococcus_phage	1.3e-71	99.3
WP_000857133.1\|1332_1563_+	helix-turn-helix domain-containing protein	A0A1S5SEX1	Streptococcus_phage	2.7e-36	100.0
WP_001845478.1\|1788_2040_-	hypothetical protein	NA	NA	NA	NA
1970:1982	attL	NA	NA	NA	NA
WP_000814511.1\|2023_2227_+	excisionase	A0A1S5SF07	Streptococcus_phage	4.0e-31	100.0
WP_001291561.1\|2308_3526_+\|integrase	tyrosine-type recombinase/integrase	A0A1S5SEW7	Streptococcus_phage	3.7e-233	100.0
WP_001085741.1\|3779_4919_-	recombinase RecA	A0A0S2MVG1	Bacillus_phage	5.4e-125	65.4
4660:4672	attR	NA	NA	NA	NA

DBSCAN-SWA_2

50193 : 65869

Streptococcus_phage(64.29%)

integrase

attL 49340:49359|attR 63272:63291

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
49340:49359	attL	NA	NA	NA	NA
WP_060474137.1\|50193_50571_-	DUF1492 domain-containing protein	A0A1L2JXS9	Streptococcus_phage	1.0e-08	37.4
WP_000500997.1\|50545_50908_-	DUF1492 domain-containing protein	NA	NA	NA	NA
WP_000661535.1\|51305_51794_-	hypothetical protein	A0A1X9I5V2	Streptococcus_phage	1.2e-46	56.2
WP_001258774.1\|51878_52484_-	hypothetical protein	A0A1X9I5U4	Streptococcus_phage	7.0e-39	46.8
WP_000694577.1\|52667_52841_-	hypothetical protein	A0A1X9I5U0	Streptococcus_phage	1.9e-10	59.6
WP_000838178.1\|53100_54603_-	DNA primase	Q9AZI5	Lactococcus_phage	2.7e-63	37.2
WP_001029298.1\|54622_55480_-	hypothetical protein	A0A1X9I6L2	Streptococcus_phage	4.3e-119	72.0
WP_000492120.1\|55480_55753_-	hypothetical protein	A0A1X9I5U9	Streptococcus_phage	2.5e-28	69.8
WP_000174504.1\|55745_56087_-	hypothetical protein	NA	NA	NA	NA
WP_000206024.1\|56083_56446_-	hypothetical protein	NA	NA	NA	NA
WP_025194473.1\|56457_56649_-	hypothetical protein	NA	NA	NA	NA
WP_000877492.1\|56772_57105_-	hypothetical protein	NA	NA	NA	NA
WP_001261785.1\|57359_57629_-	hypothetical protein	NA	NA	NA	NA
WP_000845516.1\|57628_58249_-	phage repressor protein	A0A1W6JPC3	Staphylococcus_phage	1.4e-39	42.3
WP_017644534.1\|58302_58464_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_000906796.1\|58629_59322_+	helix-turn-helix transcriptional regulator	A0A0P0IV68	Lactobacillus_phage	4.3e-08	49.2
WP_001137532.1\|59426_59636_+	TM2 domain-containing protein	M4ZS56	Bacillus_phage	4.9e-08	55.8
WP_000350953.1\|60328_60670_+	hypothetical protein	A0A1S5SDB5	Streptococcus_phage	2.2e-13	59.7
WP_000429449.1\|60696_61662_+	DUF3644 domain-containing protein	A0A0N9RUA4	Staphylococcus_phage	7.1e-86	51.1
WP_000605382.1\|61994_63167_+\|integrase	site-specific integrase	A0A1X9I5Y5	Streptococcus_phage	4.3e-154	70.4
WP_000092759.1\|63273_63885_-	30S ribosomal protein S4	NA	NA	NA	NA
63272:63291	attR	NA	NA	NA	NA
WP_001278152.1\|64214_64502_-	hypothetical protein	NA	NA	NA	NA
WP_000852645.1\|64513_65869_-	replicative DNA helicase	A0A1P8VVQ6	Streptococcus_phage	1.2e-152	62.6

DBSCAN-SWA_3

74189 : 81393

uncultured_Caudovirales_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001042664.1\|74189_74894_-	transglycosylase SLT domain-containing protein	A0A2H4J6C5	uncultured_Caudovirales_phage	5.4e-27	56.6
WP_000029067.1\|74999_75539_-	LysM peptidoglycan-binding domain-containing protein	A0A249XZV3	Enterococcus_phage	3.0e-17	46.4
WP_000359358.1\|75754_76549_-	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA
WP_000510606.1\|76541_77384_-	energy-coupling factor transporter ATPase	W6JKT0	Anomala_cuprea_entomopoxvirus	2.5e-18	25.5
WP_000181757.1\|77359_78199_-	energy-coupling factor transporter ATPase	G9BWD6	Planktothrix_phage	3.5e-20	30.0
WP_000239223.1\|78198_78741_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA
WP_000217765.1\|78863_80147_-	insulinase family protein	A0A2K9V7S4	Bandra_megavirus	1.6e-21	33.3
WP_000706190.1\|80148_81393_-	insulinase family protein	A0A1X9I714	Streptococcus_phage	1.7e-87	41.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_ALUF01000034

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

8289 : 20354

Microbacterium_phage(14.29%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001042263.1\|8289_12015_+	phosphoribosylformylglycinamidine synthase	A6N228	Microbacterium_phage	1.6e-40	27.0
WP_000220672.1\|12248_13703_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	6.3e-54	32.5
WP_001291325.1\|13730_14753_+	phosphoribosylformylglycinamidine cyclo-ligase	A0A1D7SE90	Cyanophage	9.6e-65	44.6
WP_000685111.1\|14920_15472_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	1.8e-25	35.6
WP_000780020.1\|15491_16244_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_000166558.1\|16263_17811_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	E3SNU8	Prochlorococcus_phage	4.4e-45	52.9
WP_001045908.1\|18003_18903_+	peptidoglycan DD-metalloendopeptidase family protein	A0A221J6U0	Arthrobacter_phage	4.1e-19	45.9
WP_000783424.1\|19049_20354_+	LysM peptidoglycan-binding domain-containing protein	A0A0E3XB61	Gordonia_phage	4.6e-11	36.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_ALUF01000028

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr_ID: NZ_ALUF01000028.1|WP_000384271.1|863_1190_-|hypothetical-protein

Click the colored protein region to show detailed information

Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_ALUF01000028.1|WP_000384271.1|863_1190_-|hypothetical-protein

863_1190_-

108 aa aa

AcrIIA21

hit_Aca_id	identity	query_coverage	hit_coverage
anti_CRISPR3639\|WP_000384271.1\|AcrIIA21\|II-A\|Verified\|Streptococcus	1.0	1	1.0

4. NZ_ALUF01000006

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

22107 : 35817

Streptococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000420682.1\|22107_22422_+	YdcP family protein	A0A1S5SF38	Streptococcus_phage	5.2e-54	100.0
WP_000985015.1\|22437_22824_+	YdcP family protein	A0A1S5SF96	Streptococcus_phage	3.0e-64	100.0
WP_000813486.1\|22852_24238_+	DNA translocase FtsK	A0A1S5SFB5	Streptococcus_phage	9.4e-265	99.8
WP_000879507.1\|24240_24393_+	hypothetical protein	NA	NA	NA	NA
WP_000398284.1\|24415_25621_+	XRE family transcriptional regulator	A0A1S5SEX3	Streptococcus_phage	2.8e-233	100.0
WP_001009056.1\|25663_25885_+	hypothetical protein	A0A1S5SEY0	Streptococcus_phage	4.3e-31	100.0
WP_000342539.1\|26001_26499_+	antirestriction protein ArdA	A0A1S5SF25	Streptococcus_phage	1.7e-91	100.0
WP_000506270.1\|26473_26980_+	conjugal transfer protein	A0A1S5SEX7	Streptococcus_phage	8.6e-91	100.0
WP_000331160.1\|26963_29411_+	ATP-binding protein	A0A1S5SF64	Streptococcus_phage	0.0e+00	100.0
WP_000804748.1\|29413_31591_+	membrane protein	A0A1S5SF30	Streptococcus_phage	0.0e+00	100.0
WP_000769868.1\|31587_32589_+	peptidase P60	A0A1S5SEZ8	Streptococcus_phage	5.0e-191	100.0
WP_001863540.1\|32585_33521_+	conjugal transfer protein	A0A1S5SF22	Streptococcus_phage	2.6e-170	99.7
WP_011058339.1\|33795_33882_+	tetracycline resistance determinant leader peptide	NA	NA	NA	NA
WP_000691732.1\|33897_35817_+	tetracycline resistance ribosomal protection protein Tet(M)	A0A1S5SF82	Streptococcus_phage	0.0e+00	99.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

5. NZ_ALUF01000026

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

6. NZ_ALUF01000040

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

12059 : 32167

Streptococcus_phage(100.0%)

terminase,tail,head,portal,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001208490.1\|12059_12341_+	VRR-NUC domain-containing protein	M1PFY8	Streptococcus_phage	2.0e-36	77.4
WP_000460378.1\|12450_13698_+	DEAD/DEAH box helicase	A0A1X9I6B0	Streptococcus_phage	8.3e-212	86.7
WP_000356299.1\|13690_14188_+	hypothetical protein	A0A1B0RXB9	Streptococcus_phage	5.7e-63	75.0
WP_000640704.1\|14580_15618_+	methionine adenosyltransferase	E4ZFL0	Streptococcus_phage	4.2e-169	84.9
WP_001138027.1\|15619_15985_+	HNH endonuclease	A0A1B0RXJ3	Streptococcus_phage	6.4e-64	90.1
WP_000999419.1\|16304_16760_+	hypothetical protein	A0A1B0RXC6	Streptococcus_phage	1.4e-44	51.6
WP_000211618.1\|16731_17988_+	DNA modification methylase	E4ZFL4	Streptococcus_phage	4.4e-221	89.2
WP_000176351.1\|17984_19238_+	DNA (cytosine-5-)-methyltransferase	M1NSK8	Streptococcus_phage	6.1e-231	93.5
WP_000342210.1\|19580_20030_+	DUF4314 domain-containing protein	E4ZFL7	Streptococcus_phage	6.1e-16	63.6
WP_000290859.1\|20081_20555_+\|terminase	phage terminase small subunit P27 family	A0A1X9I6K0	Streptococcus_phage	1.9e-84	96.2
WP_000220989.1\|20551_22144_+\|terminase	terminase large subunit	A0A1B0RXJ8	Streptococcus_phage	9.0e-304	94.9
WP_001166641.1\|22214_22472_+	type II toxin-antitoxin system Phd/YefM family antitoxin	E4ZFM1	Streptococcus_phage	1.2e-35	95.3
WP_001221831.1\|22468_22840_+	type II toxin-antitoxin system death-on-curing family toxin	A0A1X9I6C0	Streptococcus_phage	3.5e-57	88.6
WP_000149739.1\|22865_23192_+	hypothetical protein	NA	NA	NA	NA
WP_000511757.1\|23259_24549_+\|portal	phage portal protein	D0R0D3	Streptococcus_phage	1.6e-229	89.7
WP_001225238.1\|24541_25240_+\|protease	Clp protease ClpP	A0A1B0RXE1	Streptococcus_phage	8.4e-105	82.8
WP_000988604.1\|26458_26716_+\|head,tail	phage gp6-like head-tail connector protein	D0R0D7	Streptococcus_phage	9.5e-30	77.6
WP_000684963.1\|26715_27054_+\|head,tail	head-tail adaptor protein	A0A1B0RXE4	Streptococcus_phage	4.7e-37	68.8
WP_000161247.1\|27046_27415_+	hypothetical protein	Q6DMT7	Streptococcus_phage	3.5e-33	62.9
WP_001209970.1\|27423_27624_+	hypothetical protein	M1Q1Z4	Streptococcus_phage	7.4e-22	68.2
WP_000818569.1\|27752_28322_+	hypothetical protein	A0A1B0RXE2	Streptococcus_phage	3.6e-98	95.2
WP_001249617.1\|28333_28753_+	hypothetical protein	A0A1X9I691	Streptococcus_phage	9.7e-56	76.3
WP_000918339.1\|29047_32167_+	hypothetical protein	Q6DMT2	Streptococcus_phage	1.7e-253	77.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

7. NZ_ALUF01000024

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

31572 : 40062

Streptococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000767484.1\|31572_32400_+	exodeoxyribonuclease III	M1PSC0	Streptococcus_phage	4.3e-124	78.0
WP_000287944.1\|32439_32796_-	arsenate reductase family protein	M1PLC0	Streptococcus_phage	1.5e-41	71.8
WP_000966772.1\|32797_33274_-	methylated-DNA--[protein]-cysteine S-methyltransferase	M1PFU9	Streptococcus_phage	7.1e-39	50.9
WP_000232156.1\|33328_34510_-	phosphoglycerate dehydrogenase	M1NSB9	Streptococcus_phage	7.0e-168	75.6
WP_001167085.1\|34572_35121_-	acetyltransferase	M1PSC3	Streptococcus_phage	1.1e-54	58.4
WP_000603277.1\|36413_37049_+	copper homeostasis protein CutC	NA	NA	NA	NA
WP_011058365.1\|37092_37197_-	hypothetical protein	NA	NA	NA	NA
WP_011058366.1\|37181_37343_+	hypothetical protein	NA	NA	NA	NA
WP_001866320.1\|37318_38182_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	M1PLC5	Streptococcus_phage	3.7e-110	70.4
WP_000358198.1\|38187_38514_-	DNA replication initiation control protein YabA	M1PFV3	Streptococcus_phage	3.2e-30	61.1
WP_000364565.1\|38543_39407_-	DNA polymerase III subunit delta'	M1NSC1	Streptococcus_phage	7.3e-74	49.7
WP_000715592.1\|39426_40062_-	dTMP kinase	M1PSC7	Streptococcus_phage	2.8e-67	61.1

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

8. NZ_ALUF01000041

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

79989 : 88979

Bacillus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000222544.1\|79989_81708_+	phospho-sugar mutase	A0A1X9I671	Streptococcus_phage	1.4e-278	84.8
WP_000746859.1\|81770_81968_-	hypothetical protein	NA	NA	NA	NA
WP_000647642.1\|81981_83715_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	1.7e-50	30.6
WP_000826939.1\|83715_85437_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	4.7e-40	26.7
WP_000472259.1\|85448_86051_-	lysozyme family protein	A0A223LKM8	Bacillus_phage	1.1e-20	40.1
WP_025194855.1\|86052_87030_-	nucleoid-associated protein	NA	NA	NA	NA
WP_000575549.1\|87034_88291_-	serine hydroxymethyltransferase	A0A240F3L3	Aeromonas_phage	7.8e-93	51.7
WP_000998735.1\|88382_88979_-	threonylcarbamoyl-AMP synthase	A0A291ATS8	Pandoravirus	1.1e-15	29.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

9. NZ_ALUF01000004

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

61971 : 72243

Streptococcus_phage(57.14%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000638895.1\|61971_63117_-	cysteine desulfurase	A0A1X6WFP1	Pacmanvirus	9.5e-29	28.4
WP_000033715.1\|63363_63816_+	hypothetical protein	NA	NA	NA	NA
WP_000043884.1\|63858_65208_-	glutathione-disulfide reductase	A0A2K5B2C5	Erysipelothrix_phage	1.3e-32	25.5
WP_000024621.1\|65382_65718_-	YlbF/YmcA family competence regulator	A0A1X9I5Y8	Streptococcus_phage	8.9e-20	39.4
WP_001269901.1\|65801_66968_-	chorismate synthase	A0A291AU41	Pandoravirus	9.3e-40	34.1
WP_001195733.1\|66968_68036_-	3-dehydroquinate synthase	NA	NA	NA	NA
WP_000707048.1\|68129_68807_-	type I 3-dehydroquinate dehydratase	W6LP76	Streptococcus_phage	5.3e-88	68.4
WP_001037600.1\|68806_69964_-	class I SAM-dependent rRNA methyltransferase	W6LLI2	Streptococcus_phage	4.6e-140	66.0
WP_000721261.1\|70098_72243_+	LTA synthase family protein	W6LM83	Streptococcus_phage	6.3e-260	67.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

10. NZ_ALUF01000027

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_ALUF01000027_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_ALUF01000027_1

230788-232340

TypeII

II-A

Consensus_repeat	Method
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	PILER-CR
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	CRISPRCasFinder
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	CRT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	PILER-CR
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	PILER-CR

23 spacers

csn2,cas2,cas1,cas9

The CRISPR arrays of NZ_ALUF01000027_1

>merge|NZ_ALUF01000027|1|230788-232340|PILER-CR,CRISPRCasFinder,CRT,PILER-CR,PILER-CR
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACTTTTTTTGAATATATAAAAAGTCCCTGCAAGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACAAAGGAGTATAACATGGAAAATCCAATTACGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACACTAGCGACATGATGTTTGCAGTAACGGCTGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACAATGGTGGCTAACATCAGTGACGAATCGTTGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACTAATATTTTTACTAAAGTGTTAAATACAAAGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACAGGCAATATAAGAGATATTAGAGAAAGCTTGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACCAAATATCTAGCGACTGGCTCATATTCATCGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACCCTGAAATTGGCTGATATTTTTGATGAGTTGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACTCCCAAATTTGTAACTCCCAAGGATAGTAGGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACCCGATTATTTCCTACATAATACGCACGTTGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACTTTGATAGTGGTGTGGTTGTTATCAGGCATGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACTCTACCCACCTCCCAAGCTGAAATGGCTGTGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACGGTGAGGGTGCGTAGGATAGCTGACAAACTGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACTTATCATGATGAGGAACAATCAATTGATCAGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACTTCCTTAAAAACAAAAACAGCACCCACATTGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACTATTATCAAAATATTCTTTGGCGAATTCATGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACCATTACAGTCTTTGAGCAAGGTTATATGCTGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACAGCTATTGCTCAAAAAAGAGTAACAGCTCAGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACTTTTTCTATTTTATTTATTTCAATAGCATCGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACCAGGAGATCTATAACACTGAGTTCATTCTAGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACAAAACAATTGAAGAGCTGGAGAATTACACTGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACTTGGAAAAAACACGAAAGTGATATTACTTTGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACATCTTCTTTTGACCTAACAAAAGGATATGTGTTTTAGAGCTGTGCTGTTATTATGCTAGGACATCA

>NZ_ALUF01000027|1|1|230788-231417|PILER-CR
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TTTTTTTGAATATATAAAAAGTCCCTGCAA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	AAAGGAGTATAACATGGAAAATCCAATTAC
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	ACTAGCGACATGATGTTTGCAGTAACGGCT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	AATGGTGGCTAACATCAGTGACGAATCGTT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TAATATTTTTACTAAAGTGTTAAATACAAA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	AGGCAATATAAGAGATATTAGAGAAAGCTT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	CAAATATCTAGCGACTGGCTCATATTCATC
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	CCTGAAATTGGCTGATATTTTTGATGAGTT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TCCCAAATTTGTAACTCCCAAGGATAGTAG
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACCCGATTATTTCCTACATAATACGCACGTTGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TTTGATAGTGGTGTGGTTGTTATCAGGCAT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TCTACCCACCTCCCAAGCTGAAATGGCTGT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	GGTGAGGGTGCGTAGGATAGCTGACAAACT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TTATCATGATGAGGAACAATCAATTGATCA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TTCCTTAAAAACAAAAACAGCACCCACATT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TATTATCAAAATATTCTTTGGCGAATTCAT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	CATTACAGTCTTTGAGCAAGGTTATATGCT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	AGCTATTGCTCAAAAAAGAGTAACAGCTCA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACTTTTTCTATTTTATTTATTTCAATAGCATCGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	CAGGAGATCTATAACACTGAGTTCATTCTA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	AAAACAATTGAAGAGCTGGAGAATTACACT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TTGGAAAAAACACGAAAGTGATATTACTTT


>NZ_ALUF01000027|1|1|230788-232274|CRISPRCasFinder
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TTTTTTTGAATATATAAAAAGTCCCTGCAA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	AAAGGAGTATAACATGGAAAATCCAATTAC
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	ACTAGCGACATGATGTTTGCAGTAACGGCT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	AATGGTGGCTAACATCAGTGACGAATCGTT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TAATATTTTTACTAAAGTGTTAAATACAAA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	AGGCAATATAAGAGATATTAGAGAAAGCTT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	CAAATATCTAGCGACTGGCTCATATTCATC
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	CCTGAAATTGGCTGATATTTTTGATGAGTT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TCCCAAATTTGTAACTCCCAAGGATAGTAG
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	CCGATTATTTCCTACATAATACGCACGTT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TTTGATAGTGGTGTGGTTGTTATCAGGCAT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TCTACCCACCTCCCAAGCTGAAATGGCTGT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	GGTGAGGGTGCGTAGGATAGCTGACAAACT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TTATCATGATGAGGAACAATCAATTGATCA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TTCCTTAAAAACAAAAACAGCACCCACATT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TATTATCAAAATATTCTTTGGCGAATTCAT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	CATTACAGTCTTTGAGCAAGGTTATATGCT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	AGCTATTGCTCAAAAAAGAGTAACAGCTCA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TTTTTCTATTTTATTTATTTCAATAGCATC
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	CAGGAGATCTATAACACTGAGTTCATTCTA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	AAAACAATTGAAGAGCTGGAGAATTACACT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TTGGAAAAAACACGAAAGTGATATTACTTT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC

>NZ_ALUF01000027|1|1|230788-232340|CRT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TTTTTTTGAATATATAAAAAGTCCCTGCAA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	AAAGGAGTATAACATGGAAAATCCAATTAC
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	ACTAGCGACATGATGTTTGCAGTAACGGCT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	AATGGTGGCTAACATCAGTGACGAATCGTT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TAATATTTTTACTAAAGTGTTAAATACAAA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	AGGCAATATAAGAGATATTAGAGAAAGCTT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	CAAATATCTAGCGACTGGCTCATATTCATC
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	CCTGAAATTGGCTGATATTTTTGATGAGTT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TCCCAAATTTGTAACTCCCAAGGATAGTAG
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	CCGATTATTTCCTACATAATACGCACGTT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TTTGATAGTGGTGTGGTTGTTATCAGGCAT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TCTACCCACCTCCCAAGCTGAAATGGCTGT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	GGTGAGGGTGCGTAGGATAGCTGACAAACT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TTATCATGATGAGGAACAATCAATTGATCA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TTCCTTAAAAACAAAAACAGCACCCACATT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TATTATCAAAATATTCTTTGGCGAATTCAT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	CATTACAGTCTTTGAGCAAGGTTATATGCT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	AGCTATTGCTCAAAAAAGAGTAACAGCTCA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TTTTTCTATTTTATTTATTTCAATAGCATC
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	CAGGAGATCTATAACACTGAGTTCATTCTA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	AAAACAATTGAAGAGCTGGAGAATTACACT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TTGGAAAAAACACGAAAGTGATATTACTTT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	ATCTTCTTTTGACCTAACAAAAGGATATGT
GTTTTAGAGCTGTGCTGTTATTATGCTAGGACATCA

>NZ_ALUF01000027|1|2|231447-232010|PILER-CR
	TTTTTTTGAATATATAAAAAGTCCCTGCAA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	AAAGGAGTATAACATGGAAAATCCAATTAC
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	ACTAGCGACATGATGTTTGCAGTAACGGCT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	AATGGTGGCTAACATCAGTGACGAATCGTT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TAATATTTTTACTAAAGTGTTAAATACAAA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	AGGCAATATAAGAGATATTAGAGAAAGCTT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	CAAATATCTAGCGACTGGCTCATATTCATC
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	CCTGAAATTGGCTGATATTTTTGATGAGTT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TCCCAAATTTGTAACTCCCAAGGATAGTAG
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACCCGATTATTTCCTACATAATACGCACGTTGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TTTGATAGTGGTGTGGTTGTTATCAGGCAT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TCTACCCACCTCCCAAGCTGAAATGGCTGT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	GGTGAGGGTGCGTAGGATAGCTGACAAACT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TTATCATGATGAGGAACAATCAATTGATCA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TTCCTTAAAAACAAAAACAGCACCCACATT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TATTATCAAAATATTCTTTGGCGAATTCAT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	CATTACAGTCTTTGAGCAAGGTTATATGCT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	AGCTATTGCTCAAAAAAGAGTAACAGCTCA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACTTTTTCTATTTTATTTATTTCAATAGCATCGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	CAGGAGATCTATAACACTGAGTTCATTCTA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	AAAACAATTGAAGAGCTGGAGAATTACACT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TTGGAAAAAACACGAAAGTGATATTACTTT


>NZ_ALUF01000027|1|3|232041-232274|PILER-CR
	TTTTTTTGAATATATAAAAAGTCCCTGCAA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	AAAGGAGTATAACATGGAAAATCCAATTAC
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	ACTAGCGACATGATGTTTGCAGTAACGGCT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	AATGGTGGCTAACATCAGTGACGAATCGTT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TAATATTTTTACTAAAGTGTTAAATACAAA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	AGGCAATATAAGAGATATTAGAGAAAGCTT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	CAAATATCTAGCGACTGGCTCATATTCATC
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	CCTGAAATTGGCTGATATTTTTGATGAGTT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TCCCAAATTTGTAACTCCCAAGGATAGTAG
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACCCGATTATTTCCTACATAATACGCACGTTGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TTTGATAGTGGTGTGGTTGTTATCAGGCAT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TCTACCCACCTCCCAAGCTGAAATGGCTGT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	GGTGAGGGTGCGTAGGATAGCTGACAAACT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TTATCATGATGAGGAACAATCAATTGATCA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TTCCTTAAAAACAAAAACAGCACCCACATT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TATTATCAAAATATTCTTTGGCGAATTCAT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	CATTACAGTCTTTGAGCAAGGTTATATGCT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	AGCTATTGCTCAAAAAAGAGTAACAGCTCA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACTTTTTCTATTTTATTTATTTCAATAGCATCGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	CAGGAGATCTATAACACTGAGTTCATTCTA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	AAAACAATTGAAGAGCTGGAGAATTACACT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TTGGAAAAAACACGAAAGTGATATTACTTT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_ALUF01000027.1\|WP_000590706.1\|230021_230687_+\|type-II-A-CRISPR-associated-protein-Csn2	csn2	pfam09711_csn2_CAS-II-A	gnl\|CDD\|213408
NZ_ALUF01000027.1\|WP_001019133.1\|233449_235282_+\|elongation-factor-4	unknown	unknown	gnl\|CDD\|235462
NZ_ALUF01000027.1\|WP_000621142.1\|238928_239393_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_ALUF01000027.1\|WP_011058334.1\|232594_232765_+\|hypothetical-protein	unknown	unknown	unknown
NZ_ALUF01000027.1\|WP_000914664.1\|221037_222168_+\|oxygen-independent-coproporphyrinogen-III-oxidase	unknown	unknown	gnl\|CDD\|236309
NZ_ALUF01000027.1\|WP_000665410.1\|239392_239827_+\|peptide-methionine-(R)-S-oxide-reductase-MsrB	unknown	unknown	gnl\|CDD\|234692
NZ_ALUF01000027.1\|WP_001040087.1\|224713_228826_+\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	COG3513_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|273840
NZ_ALUF01000027.1\|WP_000523795.1\|222171_222909_+\|acyl-ACP-thioesterase	unknown	unknown	gnl\|CDD\|366738
NZ_ALUF01000027.1\|WP_000159234.1\|220169_220541_+\|YbgA-family-protein	unknown	unknown	gnl\|CDD\|377982
NZ_ALUF01000027.1\|WP_000168898.1\|239978_242771_+\|cation-transporting-P-type-ATPase	unknown	unknown	gnl\|CDD\|223550
NZ_ALUF01000027.1\|WP_000180007.1\|238260_238920_+\|HD-domain-containing-protein	unknown	unknown	gnl\|CDD\|224336
NZ_ALUF01000027.1\|WP_000929489.1\|228827_229697_+\|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|274694
NZ_ALUF01000027.1\|WP_000065321.1\|242770_243874_+\|DUF2974-domain-containing-protein	unknown	unknown	gnl\|CDD\|371412
NZ_ALUF01000027.1\|WP_000146566.1\|243994_244633_-\|CatB-related-O-acetyltransferase	unknown	unknown	gnl\|CDD\|100040
NZ_ALUF01000027.1\|WP_000653357.1\|223669_224326_+\|TIGR01906-family-membrane-protein	unknown	unknown	gnl\|CDD\|226884
NZ_ALUF01000027.1\|WP_000122194.1\|229693_230035_+\|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226043
NZ_ALUF01000027.1\|WP_001241816.1\|220565_220946_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|131381
NZ_ALUF01000027.1\|WP_000323544.1\|222909_223680_+\|TIGR01457-family-HAD-type-hydrolase	unknown	unknown	gnl\|CDD\|319832
NZ_ALUF01000027.1\|WP_000438314.1\|232897_233314_+\|nucleoside-diphosphate-kinase	unknown	unknown	gnl\|CDD\|179085
NZ_ALUF01000027.1\|WP_029662154.1\|235542_238161_+\|pneumococcal-type-histidine-triad-protein	unknown	unknown	gnl\|CDD\|380193

Protein	Function_ID	Function_description	E-value
NZ_ALUF01000027.1\|WP_000590706.1\|230021_230687_+\|type-II-A-CRISPR-associated-protein-Csn2	gnl\|CDD\|213408	cd09758, Csn2, CRISPR/Cas system-associated protein Csn2. Csn2 is a Nmeni subtype-specific Cas protein, which may function in the adaptation process which mediates the incorporation of foreign nucleic acids into the microbial host genome. Csn 2 may interact directly with double-stranded DNA. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA. Csn2 has been predicted to be a functional analog of Cas4 based on anti-correlated phyletic patterns; also known as SPy1049 family.	3.61399e-122
NZ_ALUF01000027.1\|WP_001019133.1\|233449_235282_+\|elongation-factor-4	gnl\|CDD\|235462	PRK05433, PRK05433, GTP-binding protein LepA; Provisional.	0
NZ_ALUF01000027.1\|WP_000621142.1\|238928_239393_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	5.91796e-19
NZ_ALUF01000027.1\|WP_000180007.1\|238260_238920_+\|HD-domain-containing-protein	gnl\|CDD\|224336	COG1418, COG1418, Predicted HD superfamily hydrolase [General function prediction only].	2.66997e-33
NZ_ALUF01000027.1\|WP_000914664.1\|221037_222168_+\|oxygen-independent-coproporphyrinogen-III-oxidase	gnl\|CDD\|236309	PRK08599, PRK08599, oxygen-independent coproporphyrinogen III oxidase.	0
NZ_ALUF01000027.1\|WP_000665410.1\|239392_239827_+\|peptide-methionine-(R)-S-oxide-reductase-MsrB	gnl\|CDD\|234692	PRK00222, PRK00222, peptide-methionine (R)-S-oxide reductase MsrB.	6.40832e-86
NZ_ALUF01000027.1\|WP_001040087.1\|224713_228826_+\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	gnl\|CDD\|273840	TIGR01865, conserved_hypothetical_protein, CRISPR subtype II/NMENI RNA-guided endonuclease Cas9/Csn1. CRISPR loci appear to be mobile elements with a wide host range. This model represents a protein found only in CRISPR-containing species, near other CRISPR-associated proteins (cas), as part of the NMENI subtype of CRISPR/Cas locus. The species range so far for this protein is animal pathogens and commensals only.	0
NZ_ALUF01000027.1\|WP_000523795.1\|222171_222909_+\|acyl-ACP-thioesterase	gnl\|CDD\|366738	pfam01643, Acyl-ACP_TE, Acyl-ACP thioesterase. This family consists of various acyl-acyl carrier protein (ACP) thioesterases (TE) these terminate fatty acyl group extension via hydrolysing an acyl group on a fatty acid.	3.68196e-111
NZ_ALUF01000027.1\|WP_000159234.1\|220169_220541_+\|YbgA-family-protein	gnl\|CDD\|377982	pfam08349, DUF1722, Protein of unknown function (DUF1722). This domain of unknown function is found in bacteria and archaea and is homologous to the hypothetical protein ybgA from E. coli.	6.08694e-28
NZ_ALUF01000027.1\|WP_000168898.1\|239978_242771_+\|cation-transporting-P-type-ATPase	gnl\|CDD\|223550	COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism].	0
NZ_ALUF01000027.1\|WP_000929489.1\|228827_229697_+\|type-II-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274694	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is a prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 variant of the NMENI subtype of CRISPR/Cas system.	2.54315e-139
NZ_ALUF01000027.1\|WP_000065321.1\|242770_243874_+\|DUF2974-domain-containing-protein	gnl\|CDD\|371412	pfam11187, DUF2974, Protein of unknown function (DUF2974). This bacterial family of proteins has no known function.	1.82724e-105
NZ_ALUF01000027.1\|WP_000146566.1\|243994_244633_-\|CatB-related-O-acetyltransferase	gnl\|CDD\|100040	cd03349, LbH_XAT, Xenobiotic acyltransferase (XAT): The XAT class of hexapeptide acyltransferases is composed of a large number of microbial enzymes that catalyze the CoA-dependent acetylation of a variety of hydroxyl-bearing acceptors such as chloramphenicol and streptogramin, among others. Members of this class of enzymes include Enterococcus faecium streptogramin A acetyltransferase and Pseudomonas aeruginosa chloramphenicol acetyltransferase. They contain repeated copies of a six-residue hexapeptide repeat sequence motif (X-[STAV]-X-[LIV]-[GAED]-X) and adopt a left-handed parallel beta helix (LbH) structure. The active enzyme is a trimer with CoA and substrate binding sites at the interface of two separate LbH subunits. XATs are implicated in inactivating xenobiotics leading to xenobiotic resistance in patients.	9.50556e-71
NZ_ALUF01000027.1\|WP_000653357.1\|223669_224326_+\|TIGR01906-family-membrane-protein	gnl\|CDD\|226884	COG4478, COG4478, Predicted membrane protein [Function unknown].	9.75792e-52
NZ_ALUF01000027.1\|WP_000122194.1\|229693_230035_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	2.38084e-52
NZ_ALUF01000027.1\|WP_001241816.1\|220565_220946_+\|hypothetical-protein	gnl\|CDD\|131381	TIGR02328, TIGR02328, conserved hypothetical protein. Members of this protein are found in a small number of taxonomically well separated species, yet are strongly conserved, suggesting lateral gene transfer. Members are found in Treponema denticola, Clostridium acetobutylicum, and several of the Firmicutes. The function of this protein is unknown. [Hypothetical proteins, Conserved].	6.45558e-80
NZ_ALUF01000027.1\|WP_000323544.1\|222909_223680_+\|TIGR01457-family-HAD-type-hydrolase	gnl\|CDD\|319832	cd07530, HAD_Pase_UmpH-like, UmpH/NagD family phosphatase, similar to Escherichia coli UmpH UMP phosphatase/NagD nucleotide phosphatase and Mycobacterium tuberculosis Rv1692 glycerol 3-phosphate phosphatase. Escherichia coli UmpH/NagD is a ribonucleoside tri-, di-, and monophosphatase with a preference for purines, it shows peak activity with UMP and functions in UMP-degradation. It is also an effective phosphatase with AMP, GMP and CMP. Mycobacterium tuberculosis phosphatase, Rv1692 is a glycerol 3-phosphate phosphatase. Rv1692 is the final enzyme involved in glycerophospholipid recycling/catabolism. This subfamily belongs to the UmpH/NagD phosphatase family, and to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	1.19143e-132
NZ_ALUF01000027.1\|WP_000438314.1\|232897_233314_+\|nucleoside-diphosphate-kinase	gnl\|CDD\|179085	PRK00668, ndk, mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-; Validated.	4.64422e-78
NZ_ALUF01000027.1\|WP_029662154.1\|235542_238161_+\|pneumococcal-type-histidine-triad-protein	gnl\|CDD\|380193	NF033189, internalin_A, class 1 internalin InlA. Internalins, as found in the intracellular human pathogen Listeria monocytogenes, are paralogous surface or secreted proteins with an N-terminal signal peptide, leucine-rich repeats, and usually a C-terminal LPXTG processing and cell surface anchoring site. See PMID:17764999 for a general discussion of internalins. Members of this family are internalin A (InlA), a class 1 (LPXTG-type) internalin.	1.10721e-21

>NZ_ALUF01000027.1|WP_000590706.1|230021_230687_+|type-II-A-CRISPR-associated-protein-Csn2
MIKINFPILDEPLVLSNATILTIEDVSVYSSLVKHFYQYDVDEHLKLFDDKQKSLKATELMLVTDILGYDVNSAPILKLIHGDLENQFNEKPEVKSMVEKLAATITELIAFECLENELDLEYDEITILELIKALGVKIETQSDTIFEKCFEIIQVYHYLTKKNLLVFVNSGAYLTKDEVIKLCEYINLMQKSVLFLEPRRLYDLPQYVIDKDYFLIGENMV
>NZ_ALUF01000027.1|WP_000122194.1|229693_230035_+|CRISPR-associated-endonuclease-Cas2
MSYRYMRMILMFDMPTETAEERKAYRKFRKFLLSEGFIMHQFSVYSKLLLNNTANNAMIGRLKVNNPKKGNITLLTVTEKQFARMVYLHGERNTSVANSDSRLVFLGDSYDQD
>NZ_ALUF01000027.1|WP_000929489.1|228827_229697_+|type-II-CRISPR-associated-endonuclease-Cas1
MAGWRTVVVNTHSKLSYKNNHLIFKDSYQTEMIHLSEIDILIMETTDIVLSTMLIKRLVDENILVIFCDDKRLPTAMLMPYYARHDSSLQLSRQMSWIEDVKADVWTSIIAQKILNQSFYLGECSFFEKSQSIMNLYHDLEPFDPSNREGHAARIYFNTLFGNDFSREQDNPINAGLDYGYSLLLSMFAREVVKCGCMTQFGLKHANQFNQFNLASDIMEPFRPIVDRIIYENRQSDFVKMKRELFSMFSETYSYNGKEMYLSNIVSDYTKKVIKSLNSDGNGIPEFRI
>NZ_ALUF01000027.1|WP_001040087.1|224713_228826_+|type-II-CRISPR-RNA-guided-endonuclease-Cas9
MNKPYSIGLDIGTNSVGWSIITDDYKVPAKKMRVLGNTDKEYIKKNLIGALLFDGGNTAADRRLKRTARRRYTRRRNRILYLQEIFAEEMSKVDDSFFHRLEDSFLVEEDKRGSKYPIFATLQEEKDYHEKFSTIYHLRKELADKKEKADLRLIYIALAHIIKFRGHFLIEDDSFDVRNTDISKQYQDFLEIFNTTFENNDLLSQNVDVEAILTDKISKSAKKDRILAQYPNQKSTGIFAEFLKLIVGNQADFKKYFNLEDKTPLQFAKDSYDEDLENLLGQIGDEFADLFSAAKKLYDSVLLSGILTVIDLSTKAPLSASMIQRYDEHREDLKQLKQFVKASLPEKYQEIFADSSKDGYAGYIEGKTNQEAFYKYLSKLLTKQEDSENFLEKIKNEDFLRKQRTFDNGSIPHQVHLTELKAIIRRQSEYYPFLKENQDRIEKILTFRIPYYIGPLAREKSDFAWMTRKTDDSIRPWNFEDLVDKEKSAEAFIHRMTNNDFYLPEEKVLPKHSLIYEKFTVYNELTKVRYKNEQGETYFFDSNIKQEIFDGVFKEHRKVSKKKLLDFLAKEYEEFRIVDVIGLDKENKAFNASLGTYHDLEKILDKDFLDNPDNESILEDIVQTLTLFEDREMIKKRLENYKDLFTESQLKKLYRRHYTGWGRLSAKLINGIRDKESQKTILDYLIDDGRSNRNFMQLINDDGLSFKSIISKAQAGSHSDNLKEVVGELAGSPAIKKGILQSLKIVDELVKVMGYEPEQIVVEMARENQTTNQGRRNSRQRYKLLDDGVKNLASDLNGNILKEYPTDNQALQNERLFLYYLQNGRDMYTGEALDIDNLSQYDIDHIIPQAFIKDDSIDNRVLVSSAKNRGKSDDVPSLEIVKDCKVFWKKLLDAKLMSQRKYDNLTKAERGGLTSDDKARFIQRQLVETRQITKHVARILDERFNNELDSKGRRIRKVKIVTLKSNLVSNFRKEFGFYKIREVNNYHHAHDAYLNAVVAKAILTKYPQLEPEFVYGDYPKYNSYKTRKSATEKLFFYSNIMNFFKTKVTLADGTVVVKDDIEVNNDTGEIVWDKKKHFATVRKVLSYPQNNIVKKTEIQTGGFSKESILAHGNSDKLIPRKTKDIYLDPKKYGGFDSPIVAYSVLVVADIKKGKAQKLKTVTELLGITIMERSRFEKNPSAFLESKGYLNIRADKLIILPKYSLFELENGRRRLLASAGELQKGNELALPTQFMKFLYLASRYNESKGKPEEIEKKQEFVNQHVSYFDDILQLINDFSKRVILADANLEKINKLYQDNKENISVDELANNIINLFTFTSLGAPAAFKFFDKIVDRKRYTSTKEVLNSTLIHQSITGLYETRIDLGKLGED
>NZ_ALUF01000027.1|WP_000653357.1|223669_224326_+|TIGR01906-family-membrane-protein
MKDKLLVVLTWIWIISLATLATIYIAWLIYPIEIQFLKLEKVVYLKAETIYYNFNKLMIYLTHPFISDLNMPSFPSSEDGLKHFADVKYLFTLAHGLFVILTFPVIYFLRRGWKQKSIFLYEGFFKIAIMLPIFIVVCAFLLGFDQFFTLFHEVLFPGDSTWQFNPLTDPVIWILPETFFLHCFIIFLLIYETITIILLIIGRKHLKLRKYKNKMQAL
>NZ_ALUF01000027.1|WP_000323544.1|222909_223680_+|TIGR01457-family-HAD-type-hydrolase
MAYKGYLIDLDGTIYKGKSRIPAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVETPLETIYTATMATVDYMNDMNRGKTAYVIGEEGLKKAIADAGYVEDTKNPAYVVVGLDWNVTYDKLATATLAIQNGALFIGTNPDLNIPTERGLLPGAGSLNALLEAATRIKPVFIGKPNAIIMNKALEILNIPRNQAVMVGDNYLTDIMAGINNDIDTLLVTTGFTTVEEVPDLPIQPSYVLASLDEWTFNEG
>NZ_ALUF01000027.1|WP_000523795.1|222171_222909_+|acyl-ACP-thioesterase
MGLLYRETYEVPFYESDTNHYMKLPQLLALALQISAKQSLKLGIGDDIVFKRYGLVWVVTDYIIDIERLPKHAEKIVIETEAKAHNKLLCYRYFYIYGEDGQKIITISSAFVLMDFKTRKIHPVLDDITSIYQSQRIKKVIRGPKYHPIGDSKVKQYHVRYFDLDMNGHVNNSKYLEWMYDVLDLDFLSSHIPKKIDLKYIKEIQYGTDIKSHWYQDGLVTRHDIIGGDAIHAQARIEWQEKKED
>NZ_ALUF01000027.1|WP_000914664.1|221037_222168_+|oxygen-independent-coproporphyrinogen-III-oxidase
MLKKPTSAYVHIPFCTQICYYCDFSKVFIKNQPVDAYLQALIREFRSYDITELRTLYIGGGTPTSISAVQLDYLLTELSRDLNLNTLEEFTIEANPGDLTVDKIEVLQKSAVNRVSLGVQTFNDKHLKRIGRSHNEAQIYSTIDALKTAGFQNISIDLIYALPGQTMDDVRSNVAKALSLNIPHLSLYSLILEHHTVFMNKMRRGKLHLPTEDLEAEMFEYIISEMERNGFEHYEISNFTKPGFESRHNLMYWDNVEYYGVGAGASGYLDGIRYRNRGPIQHYLKGVSEGNARLSEEVLSKNEMMEEELFLGLRKKEGVSIGKFEQKFGTSFEKRYGQIVQELQSDGLLKENNGFIQMTKKGLFLGDTVAEKFIVE
>NZ_ALUF01000027.1|WP_001241816.1|220565_220946_+|hypothetical-protein
MRLWHQDIIELLPRQQLLGQHRECCALRGNGWGRKHETVDYVFRYSPYRLFAYHQLVMEEMMERGYRVSKEWLIAEYRGMKCPRYDTLNPVDLETPIYPEHNQDYLQECLWNLKAKGIDLPINKIK
>NZ_ALUF01000027.1|WP_000159234.1|220169_220541_+|YbgA-family-protein
MTKEAELLWAKHKYLVLSKSQKIYLDIRQTLKSPNCTVLDVQSLIDQAVLLEESPSQVTNAYMHIWGYFKNKAERQEKEEFLTLLEKYRKTGYQRRKLLAFLKQLLAKYPNSYLQNSSIFEEE
>NZ_ALUF01000027.1|WP_011058334.1|232594_232765_+|hypothetical-protein
MKGYNSNLMVKGLGCSTLYLIISLTALVLLVIAGVFFVINTCKLTRKAVENLSIIN
>NZ_ALUF01000027.1|WP_000438314.1|232897_233314_+|nucleoside-diphosphate-kinase
MEQTFFMIKPDGVKRGFIGEVISRIERRGFSIDRLEVRYADADILKRHYAELTDRPFFPTLVDYMTSGPVIIGVISGEEVISTWRTMMGSTNPKDALPGTIRGDFAQAPSPNQATCNIVHGSDSPESATREIAIWFNN
>NZ_ALUF01000027.1|WP_001019133.1|233449_235282_+|elongation-factor-4
MNIEDLKKRQEKIRNFSIIAHIDHGKSTLADRILEKTETVSSREMQAQLLDSMDLERERGITIKLNAIELNYTAKDGETYIFHLIDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQTLANVYLALDNDLEILPVINKIDLPAADPERVRAEVEDVIGLDASEAVLASAKAGIGIEEILEQIVEKVPAPTGEVDAPLQALIFDSVYDAYRGVILQVRIVNGMVKPGDKIQMMSNGKTFDVTEVGIFTPKAVGRDFLATGDVGYIAASIKTVADTRVGDTITLANNPAIEPLHGYKQMNPMVFAGLYPIESNKYNDLREALEKLQLNDASLQFEPETSQALGFGFRCGFLGLLHMDVIQERLEREFNIDLIMTAPSVVYHVNTTDGEMLEVSNPSEFPDPTRVDSIEEPYVKAQIMVPQEFVGAVMELAQRKRGDFVTMDYIDDNRVNVIYQIPLAEIVFDFFDKLKSSTRGYASFDYEISEYRRSQLVKMDILLNGDKVDALSFIVHKEFAYERGKLIVDKLKKIIPRQQFEVPIQAAIGQKIVARSDIKALRKNVLAKCYGGDVSRKRKLLEKQKAGKKRMKAIGSVEVPQEAFLSVLSMDDDDKK
>NZ_ALUF01000027.1|WP_029662154.1|235542_238161_+|pneumococcal-type-histidine-triad-protein
MIALAGLVLSCHFALTACHTQEHKNSHHIKTKQVAKKKANKKKVSVKESHKKRKGVAGVDFPTDDGFLLTKDSKILSHTDSGIVVAHGNHSHFIFYSDLKGSKFSYLIPNANTKTNKNQAVRNFKAGAVAVNTLNDGYVFNPADIVSEDANGYVVRHGDHFHYIPKASLSQQKQVQASRAVSRLGNQSNSHYRVNSSKIAGLHYPTSNGFLFNGRGIKGTTPTGILVEHHNHLHFISFADLRKGGWGSIADRYQPQKKADSKKQSPSSKKPRTENTLPKDIKDKLAYLARELHLDISRIRVLKTLNGEIGFEYPHDDHTHVIMAKDIDLSKPIPNPHHDDEDHHKGHHHDESDHKHEEHEHTKSNKLSDEDQKKLIYLAEKLGLNPNQIEVLTSEDGSIIFKYPHDDHSHTIASKDIEIGKPIPDGHHDHSHAKDKVGMATLKQIGFDDEIIQDILHADAPTPFPSNETNPEKMRQWLATVTKINIGQRTNPFQRFGLSLMPNIEVLGIGFTPINDMTPVLQFKKLKQLWMTNTGITDYSFLDKMPLLEGLDISQNGIKDLSFLTKYKQLSLIAAANNGITSLKPLAELPNLQFLVLSHNNISDLTPLSNLTKLQELHLDHNNVKNLSALSGKKDLKVLDLSNNKSADLSTLKTTSLETLLLNETNTSNLSFLKQNPKVSNLTINNAKLASLDGIEESDEIVKVEAEGNQIKSLVLKNKQGSLKFLNVTNNQLTSLEGVNNYTSLETLSVSKNKLESLDIKTPNKTVTNLDFSHNNVPTSQLKLNEKNIPEAVAKNFPAVVEGSMVGNGSLAEKAAMASKEDKQVSDNTNHQKNTEKSAQANADSKKENPKTHDEHHDHEETDHAHVGHHHH
>NZ_ALUF01000027.1|WP_000180007.1|238260_238920_+|HD-domain-containing-protein
MTMVKREDVILNATENMVHHKLKNDPSGHDWFHIVRVRNLAVELAHKEGANTFICQMAALLHDIIDDKICQDSKQASYELTQWLYSQDLAIAEVEHILDILENISFKAGTGLTMKTLEGQIVQDADRLDAMGAIGIARTMAYSGSKGRLIHDPNLKPRENLTLEEYRNGQDTAIMHFYEKLLKLKDLMNTKQGKMLAQKRHDFLELYLAEFYAEWNGKR
>NZ_ALUF01000027.1|WP_000621142.1|238928_239393_+|GNAT-family-N-acetyltransferase
MIRRAKEKDLPDIAELLKQILMLHHEVRPDIFHTRGSKFSKEQLKEMLIDESKPIFVYESDEGKVVAHLFLQLQEKRDLPRKSFKTLYIDDLCIDEEVRGQQIGQKLMDFARQYAKKHGCYNITLNVWNDNQRAVSFYEKLGFKPQQTQMEEIL
>NZ_ALUF01000027.1|WP_000665410.1|239392_239827_+|peptide-methionine-(R)-S-oxide-reductase-MsrB
MKETQEELRQRIGHTAYQVTQNSATEHAFTGKYDDFFEEGIYVDIVSGEVLFSSLDKFQSGCGWPAFSKPIENRMVTNHQDHSHGMHRIEVRSRQADSHLGHVFNDGPVDAGGLRYCINSAALDFIPYDQMAKRGYGDYLSLFD
>NZ_ALUF01000027.1|WP_000168898.1|239978_242771_+|cation-transporting-P-type-ATPase
MASTNNVSDTNTRFAKEELEEVFEELGTTQGGLSDEEVAVRQKKYGLNLLSEVKQESIILLFLKNFTSLMAILLWVGGFVAIVSNSLELGLAIWMVNVINGIFSFIQEYRASQATQALEKMLPSYSRVLRKGSEEKILSEQLVPGDIVLIEEGDRISADGRLIKTTDLQVNQSALTGESNPIYKDSNVENDQSKTLIECDNMVFAGTTVSSGSATMVVTAIGMQTQFGQIADLTQGMKSEKSPLQRELDRLTKQISIISITVGIIFFLAATFFVKEPVSKSFIFALGMIVAFIPEGLLPTVTLSLAMAVQRMAKEHALVKKLSSVETLGATSVICSDKTGTLTQNEMTVNHLWQNGKSYQVTGLGYAPEGQILFEGDNICFGNSDRGDLEKLIRFAHLCSNAQVLPPNDDRSTYTVLGDPTEACLNVLLEKSGINIQENRKFAPRLKELPFDSVRKRMTTIHSLGGDEKDKKISITKGAPKEILDLSDYVLSDGKVIPLNKEERNKIQLANDTFAKDGLRVLAVSYCDIEGFSKEQWTQENLEQHMVFIGLIAMSDPPREGVREAIDKCHAASIRIIMVTGDYGLTALSIAKNIGIIRNDDAKVISGLELSEMTDSQLKKELSGEVVFARVAPEQKYRVVTILQEMGEVVAVTGDGVNDAPALKKSDIGVAMGVTGTDVAKESADMILTDDHFASIVHAVEEGRAVYQNIKKFLTYIFNSNTPEAVPSAFFLFSKGFIPLPLTVMQILAVDLGTDMLPALGLGVEPPETDVMNRPPRRLTDRLLDKGLLIKSFLWYGTIESVLAMGGFFWAHYLRYGNFTFFVANGIPYREATTMTLGAIIFSQIGMVMNSRTSYQSIKALSIFGNKLINFGIIMEILAFLVLVYVPLFHNLFNTASLGLSHWLYLISCPFIMIGLDEVRKLFSSRKNKR
>NZ_ALUF01000027.1|WP_000065321.1|242770_243874_+|DUF2974-domain-containing-protein
MSNIITYLKNNSNLTFDELALNDVDILCLNEFGYISFEKLINTTEMKSVLVCELYHEYLQTMAKSYSFMFTSQRHDLCQLMMTSKRFKNLTLSYYRAEISLEFEKQFAAMVFTIPNINYHQVVFRGTDANLIGWKEDFKLTYMREISAHRSAIKYLNTILPYFDKVVLSGHSKGGNLALYAAMFTKPDLKAKIDLIWLIDSPGLQKTLLPTTEYKTTKQKCIRLLPEESIVGMMLYSDIEPLIISSNARGILQHDVTTWEIQEPAILKTGTGLSLKSICFEKTFQQWMAELKSQERKLFFDLLFDSFLSSGVSSLDDFNLASRAKMMKAFHSFRELDDDKKRLFNKSLKLLVTIFWGAYHDNSRETK
>NZ_ALUF01000027.1|WP_000146566.1|243994_244633_-|CatB-related-O-acetyltransferase
MASILKKHLEKRLELKNDPMRTDMSTGASYPKYGFSVGKYTYGYQQFFYEGVNLKEIGAFCSIAQNVTITGLNHPTDHITTNPFIYYKSRGFINEDRADLIDEKKNGKVIIGNDVWIGTNVTILPSVTIGNGAIIGAGSVITKDIPDYGVVAGTPAKIIKYRFSEEEITLLNASQWWNWSDEAIKEHISEFSDKKEFFNTLKSISENKNHKL

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_ALUF01000027_1	1.14\|231681\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT,PILER-CR	231681-231710	30	NZ_ALUF01000026.1	43304-43333	0	1.0

1. spacer 1.14|231681|30|NZ_ALUF01000027|CRISPRCasFinder,CRT,PILER-CR matches to position: 43304-43333, mismatch: 0, identity: 1.0

ttatcatgatgaggaacaatcaattgatca	CRISPR spacer
ttatcatgatgaggaacaatcaattgatca	Protospacer
******************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_ALUF01000027_1	1.5\|231088\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	231088-231117	30	MK448798	Streptococcus phage Javan533, complete genome	23346-23375	0	1.0
NZ_ALUF01000027_1	1.5\|231088\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	231088-231117	30	NC_028700	Streptococcus phage T12, complete genome	23199-23228	0	1.0
NZ_ALUF01000027_1	1.5\|231088\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	231088-231117	30	MK448790	Streptococcus phage Javan515, complete genome	23115-23144	0	1.0
NZ_ALUF01000027_1	1.5\|231088\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	231088-231117	30	MK448967	Streptococcus phage Javan510, complete genome	23347-23376	0	1.0
NZ_ALUF01000027_1	1.5\|231088\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	231088-231117	30	NC_004588	Streptococcus prophage 315.5, complete genome	23496-23525	0	1.0
NZ_ALUF01000027_1	1.7\|231220\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	231220-231249	30	MK448852	Streptococcus phage Javan140, complete genome	9682-9711	0	1.0
NZ_ALUF01000027_1	1.7\|231220\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	231220-231249	30	MK448784	Streptococcus phage Javan505, complete genome	9990-10019	0	1.0
NZ_ALUF01000027_1	1.7\|231220\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	231220-231249	30	MK448947	Streptococcus phage Javan458, complete genome	9990-10019	0	1.0
NZ_ALUF01000027_1	1.7\|231220\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	231220-231249	30	NC_009819	Streptococcus phage P9, complete genome	9816-9845	0	1.0
NZ_ALUF01000027_1	1.7\|231220\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	231220-231249	30	MK448689	Streptococcus phage Javan163, complete genome	9989-10018	0	1.0
NZ_ALUF01000027_1	1.7\|231220\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	231220-231249	30	MK448974	Streptococcus phage Javan524, complete genome	9990-10019	0	1.0
NZ_ALUF01000027_1	1.7\|231220\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	231220-231249	30	MK448789	Streptococcus phage Javan513, complete genome	9989-10018	0	1.0
NZ_ALUF01000027_1	1.7\|231220\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	231220-231249	30	MK448678	Streptococcus phage Javan135, complete genome	9605-9634	0	1.0
NZ_ALUF01000027_1	1.8\|231286\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	231286-231315	30	NZ_CP044104	Streptococcus dysgalactiae strain FDAARGOS_654 plasmid unnamed2, complete sequence	1351-1380	0	1.0
NZ_ALUF01000027_1	1.8\|231286\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	231286-231315	30	NZ_KJ951051	Streptococcus dysgalactiae subsp. equisimilis strain G279 plasmid pG279, complete sequence	90-119	0	1.0
NZ_ALUF01000027_1	1.8\|231286\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	231286-231315	30	NC_006130	Streptococcus pyogenes 71-724 plasmid pDN571, complete sequence	943-972	0	1.0
NZ_ALUF01000027_1	1.10\|231418\|29\|NZ_ALUF01000027\|CRISPRCasFinder,CRT	231418-231446	29	MK448829	Streptococcus phage Javan7, complete genome	12669-12697	0	1.0
NZ_ALUF01000027_1	1.10\|231418\|29\|NZ_ALUF01000027\|CRISPRCasFinder,CRT	231418-231446	29	MK448956	Streptococcus phage Javan48, complete genome	14733-14761	0	1.0
NZ_ALUF01000027_1	1.10\|231418\|29\|NZ_ALUF01000027\|CRISPRCasFinder,CRT	231418-231446	29	MK448749	Streptococcus phage Javan39, complete genome	14733-14761	0	1.0
NZ_ALUF01000027_1	1.10\|231418\|29\|NZ_ALUF01000027\|CRISPRCasFinder,CRT	231418-231446	29	MH853355	Streptococcus phage LF1, complete genome	3526-3554	0	1.0
NZ_ALUF01000027_1	1.10\|231418\|29\|NZ_ALUF01000027\|CRISPRCasFinder,CRT	231418-231446	29	MH853356	Streptococcus phage LF2, partial genome	3265-3293	0	1.0
NZ_ALUF01000027_1	1.10\|231418\|29\|NZ_ALUF01000027\|CRISPRCasFinder,CRT	231418-231446	29	MK448837	Streptococcus phage Javan10, complete genome	11195-11223	0	1.0
NZ_ALUF01000027_1	1.10\|231418\|29\|NZ_ALUF01000027\|CRISPRCasFinder,CRT	231418-231446	29	MH853358	Streptococcus phage LF4, complete genome	3526-3554	0	1.0
NZ_ALUF01000027_1	1.13\|231615\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT,PILER-CR	231615-231644	30	MK448796	Streptococcus phage Javan53, complete genome	20992-21021	0	1.0
NZ_ALUF01000027_1	1.16\|231813\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT,PILER-CR	231813-231842	30	MK448971	Streptococcus phage Javan52, complete genome	6016-6045	0	1.0
NZ_ALUF01000027_1	1.16\|231813\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT,PILER-CR	231813-231842	30	MH853356	Streptococcus phage LF2, partial genome	14336-14365	0	1.0
NZ_ALUF01000027_1	1.17\|231879\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT,PILER-CR	231879-231908	30	MK448729	Streptococcus phage Javan31, complete genome	17766-17795	0	1.0
NZ_ALUF01000027_1	1.17\|231879\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT,PILER-CR	231879-231908	30	MK448691	Streptococcus phage Javan17, complete genome	17766-17795	0	1.0
NZ_ALUF01000027_1	1.17\|231879\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT,PILER-CR	231879-231908	30	MK448948	Streptococcus phage Javan46, complete genome	17710-17739	0	1.0
NZ_ALUF01000027_1	1.18\|231945\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT,PILER-CR	231945-231974	30	MK448673	Streptococcus phage Javan119, complete genome	4101-4130	0	1.0
NZ_ALUF01000027_1	1.19\|232011\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT	232011-232040	30	JX409895	Streptococcus phage JX01, complete genome	12735-12764	0	1.0
NZ_ALUF01000027_1	1.21\|232143\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT,PILER-CR	232143-232172	30	MK448729	Streptococcus phage Javan31, complete genome	17291-17320	0	1.0
NZ_ALUF01000027_1	1.21\|232143\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT,PILER-CR	232143-232172	30	MK448691	Streptococcus phage Javan17, complete genome	17291-17320	0	1.0
NZ_ALUF01000027_1	1.21\|232143\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT,PILER-CR	232143-232172	30	MK448948	Streptococcus phage Javan46, complete genome	17235-17264	0	1.0
NZ_ALUF01000027_1	1.21\|232143\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT,PILER-CR	232143-232172	30	MK448768	Streptococcus phage Javan47, complete genome	18939-18968	0	1.0
NZ_ALUF01000027_1	1.3\|230956\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	230956-230985	30	JX409894	Streptococcus phage LYGO9, complete genome	10406-10435	1	0.967
NZ_ALUF01000027_1	1.3\|230956\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	230956-230985	30	MK448749	Streptococcus phage Javan39, complete genome	38290-38319	1	0.967
NZ_ALUF01000027_1	1.3\|230956\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	230956-230985	30	JX409895	Streptococcus phage JX01, complete genome	22253-22282	1	0.967
NZ_ALUF01000027_1	1.3\|230956\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	230956-230985	30	MH853356	Streptococcus phage LF2, partial genome	24688-24717	1	0.967
NZ_ALUF01000027_1	1.3\|230956\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	230956-230985	30	MK448708	Streptococcus phage Javan23, complete genome	35918-35947	1	0.967
NZ_ALUF01000027_1	1.3\|230956\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	230956-230985	30	MK448897	Streptococcus phage Javan28, complete genome	35919-35948	1	0.967
NZ_ALUF01000027_1	1.5\|231088\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	231088-231117	30	MK449010	Streptococcus phage Javan90, complete genome	22616-22645	1	0.967
NZ_ALUF01000027_1	1.5\|231088\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	231088-231117	30	MK448833	Streptococcus phage Javan87, complete genome	22616-22645	1	0.967
NZ_ALUF01000027_1	1.6\|231154\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	231154-231183	30	MK448718	Streptococcus phage Javan253, complete genome	848-877	1	0.967
NZ_ALUF01000027_1	1.7\|231220\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	231220-231249	30	MK448946	Streptococcus phage Javan456, complete genome	12722-12751	1	0.967
NZ_ALUF01000027_1	1.7\|231220\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	231220-231249	30	MK448952	Streptococcus phage Javan472, complete genome	9717-9746	1	0.967
NZ_ALUF01000027_1	1.7\|231220\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	231220-231249	30	MK448779	Streptococcus phage Javan497, complete genome	9651-9680	1	0.967
NZ_ALUF01000027_1	1.7\|231220\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	231220-231249	30	MK448968	Streptococcus phage Javan512, complete genome	9651-9680	1	0.967
NZ_ALUF01000027_1	1.7\|231220\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	231220-231249	30	MK448797	Streptococcus phage Javan531, complete genome	9651-9680	1	0.967
NZ_ALUF01000027_1	1.7\|231220\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	231220-231249	30	NC_004589	Streptococcus prophage 315.6, complete genome	9748-9777	1	0.967
NZ_ALUF01000027_1	1.9\|231352\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	231352-231381	30	MK448796	Streptococcus phage Javan53, complete genome	1670-1699	1	0.967
NZ_ALUF01000027_1	1.9\|231352\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	231352-231381	30	MK448736	Streptococcus phage Javan35, complete genome	1570-1599	1	0.967
NZ_ALUF01000027_1	1.9\|231352\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	231352-231381	30	MK448781	Streptococcus phage Javan5, complete genome	1570-1599	1	0.967
NZ_ALUF01000027_1	1.9\|231352\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	231352-231381	30	MK448938	Streptococcus phage Javan44, complete genome	1570-1599	1	0.967
NZ_ALUF01000027_1	1.9\|231352\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	231352-231381	30	MK448911	Streptococcus phage Javan34, complete genome	1570-1599	1	0.967
NZ_ALUF01000027_1	1.9\|231352\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	231352-231381	30	MK448916	Streptococcus phage Javan36, complete genome	1570-1599	1	0.967
NZ_ALUF01000027_1	1.12\|231549\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT,PILER-CR	231549-231578	30	MK448701	Streptococcus phage Javan197, complete genome	3330-3359	1	0.967
NZ_ALUF01000027_1	1.12\|231549\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT,PILER-CR	231549-231578	30	MK448869	Streptococcus phage Javan190, complete genome	3330-3359	1	0.967
NZ_ALUF01000027_1	1.12\|231549\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT,PILER-CR	231549-231578	30	MK448870	Streptococcus phage Javan192, complete genome	3330-3359	1	0.967
NZ_ALUF01000027_1	1.17\|231879\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT,PILER-CR	231879-231908	30	MK448768	Streptococcus phage Javan47, complete genome	19414-19443	1	0.967
NZ_ALUF01000027_1	1.18\|231945\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT,PILER-CR	231945-231974	30	MK448761	Streptococcus phage Javan445, complete genome	4259-4288	1	0.967
NZ_ALUF01000027_1	1.18\|231945\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT,PILER-CR	231945-231974	30	MK448933	Streptococcus phage Javan420, complete genome	4923-4952	1	0.967
NZ_ALUF01000027_1	1.18\|231945\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT,PILER-CR	231945-231974	30	MK448760	Streptococcus phage Javan443, complete genome	4259-4288	1	0.967
NZ_ALUF01000027_1	1.19\|232011\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT	232011-232040	30	MK448795	Streptococcus phage Javan527, complete genome	4486-4515	1	0.967
NZ_ALUF01000027_1	1.19\|232011\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT	232011-232040	30	MK448854	Streptococcus phage Javan146, complete genome	5308-5337	1	0.967
NZ_ALUF01000027_1	1.5\|231088\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	231088-231117	30	MK448681	Streptococcus phage Javan141, complete genome	23218-23247	2	0.933
NZ_ALUF01000027_1	1.5\|231088\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	231088-231117	30	MK448856	Streptococcus phage Javan158, complete genome	1391-1420	2	0.933
NZ_ALUF01000027_1	1.5\|231088\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	231088-231117	30	MK448683	Streptococcus phage Javan149, complete genome	25364-25393	2	0.933
NZ_ALUF01000027_1	1.7\|231220\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	231220-231249	30	MK448871	Streptococcus phage Javan196, complete genome	9815-9844	2	0.933
NZ_ALUF01000027_1	1.7\|231220\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	231220-231249	30	MK448976	Streptococcus phage Javan528, complete genome	9815-9844	2	0.933
NZ_ALUF01000027_1	1.7\|231220\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	231220-231249	30	MK448961	Streptococcus phage Javan494, complete genome	9815-9844	2	0.933
NZ_ALUF01000027_1	1.7\|231220\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	231220-231249	30	MK448697	Streptococcus phage Javan185, complete genome	9815-9844	2	0.933
NZ_ALUF01000027_1	1.7\|231220\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	231220-231249	30	MK448693	Streptococcus phage Javan177, complete genome	9815-9844	2	0.933
NZ_ALUF01000027_1	1.7\|231220\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	231220-231249	30	MK448766	Streptococcus phage Javan465, complete genome	10782-10811	2	0.933
NZ_ALUF01000027_1	1.7\|231220\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	231220-231249	30	MK448696	Streptococcus phage Javan183, complete genome	9815-9844	2	0.933
NZ_ALUF01000027_1	1.7\|231220\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	231220-231249	30	MK448868	Streptococcus phage Javan188, complete genome	9815-9844	2	0.933
NZ_ALUF01000027_1	1.7\|231220\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	231220-231249	30	MK448866	Streptococcus phage Javan184, complete genome	9815-9844	2	0.933
NZ_ALUF01000027_1	1.7\|231220\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	231220-231249	30	MK448699	Streptococcus phage Javan189, complete genome	9815-9844	2	0.933
NZ_ALUF01000027_1	1.7\|231220\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	231220-231249	30	MK448867	Streptococcus phage Javan186, complete genome	9815-9844	2	0.933
NZ_ALUF01000027_1	1.9\|231352\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	231352-231381	30	NZ_CP040803	Streptococcus salivarius strain LAB813 plasmid pSAL813, complete sequence	23615-23644	2	0.933
NZ_ALUF01000027_1	1.11\|231483\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT,PILER-CR	231483-231512	30	MK448895	Streptococcus phage Javan274, complete genome	6366-6395	2	0.933
NZ_ALUF01000027_1	1.18\|231945\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT,PILER-CR	231945-231974	30	NZ_AF027167	Streptococcus thermophilus strain NDI-6 plasmid pCI65st, complete sequence	5491-5520	2	0.933
NZ_ALUF01000027_1	1.18\|231945\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT,PILER-CR	231945-231974	30	NC_003288	Staphylococcus phage phiETA, complete genome	5053-5082	2	0.933
NZ_ALUF01000027_1	1.18\|231945\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT,PILER-CR	231945-231974	30	AP001553	Staphylococcus phage phiETA DNA, complete genome	5053-5082	2	0.933
NZ_ALUF01000027_1	1.18\|231945\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT,PILER-CR	231945-231974	30	NC_007061	Staphylococcus phage 29, complete genome	32004-32033	2	0.933
NZ_ALUF01000027_1	1.18\|231945\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT,PILER-CR	231945-231974	30	AY508486	Bacteriophage 77, complete genome	27939-27968	2	0.933
NZ_ALUF01000027_1	1.18\|231945\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT,PILER-CR	231945-231974	30	NC_005356	Staphylococcus phage 77, complete genome	27939-27968	2	0.933
NZ_ALUF01000027_1	1.18\|231945\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT,PILER-CR	231945-231974	30	MF417930	Uncultured Caudovirales phage clone 3S_1, partial genome	16911-16940	2	0.933
NZ_ALUF01000027_1	1.18\|231945\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT,PILER-CR	231945-231974	30	NC_007047	Staphylococcus phage 187, complete genome	27989-28018	2	0.933
NZ_ALUF01000027_1	1.18\|231945\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT,PILER-CR	231945-231974	30	NC_007058	Staphylococcus phage ROSA, complete genome	30806-30835	2	0.933
NZ_ALUF01000027_1	1.18\|231945\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT,PILER-CR	231945-231974	30	AY954964	Bacteriophage 29, complete genome	32004-32033	2	0.933
NZ_ALUF01000027_1	1.18\|231945\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT,PILER-CR	231945-231974	30	AY954950	Bacteriophage 187, complete genome	27989-28018	2	0.933
NZ_ALUF01000027_1	1.18\|231945\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT,PILER-CR	231945-231974	30	MK075004	Staphylococcus phage phiSP119-1, complete genome	9044-9073	2	0.933
NZ_ALUF01000027_1	1.18\|231945\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT,PILER-CR	231945-231974	30	KJ452292	Staphylococcus phage 23MRA, complete genome	12211-12240	2	0.933
NZ_ALUF01000027_1	1.18\|231945\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT,PILER-CR	231945-231974	30	JX274646	Staphylococcus phage SP5, complete genome	4324-4353	2	0.933
NZ_ALUF01000027_1	1.18\|231945\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT,PILER-CR	231945-231974	30	NC_028915	Staphylococcus phage B236, complete genome	5753-5782	2	0.933
NZ_ALUF01000027_1	1.18\|231945\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT,PILER-CR	231945-231974	30	MF417937	Uncultured Caudovirales phage clone 10F_6, partial genome	3979-4008	2	0.933
NZ_ALUF01000027_1	1.18\|231945\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT,PILER-CR	231945-231974	30	NC_028821	Staphylococcus phage StB20-like, complete genome	35017-35046	2	0.933
NZ_ALUF01000027_1	1.18\|231945\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT,PILER-CR	231945-231974	30	AY954961	Bacteriophage ROSA, complete genome	30806-30835	2	0.933
NZ_ALUF01000027_1	1.3\|230956\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	230956-230985	30	MK448851	Streptococcus phage Javan14, complete genome	37652-37681	3	0.9
NZ_ALUF01000027_1	1.4\|231022\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	231022-231051	30	MK449010	Streptococcus phage Javan90, complete genome	16853-16882	3	0.9
NZ_ALUF01000027_1	1.4\|231022\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	231022-231051	30	MK448790	Streptococcus phage Javan515, complete genome	17309-17338	3	0.9
NZ_ALUF01000027_1	1.4\|231022\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	231022-231051	30	MK448783	Streptococcus phage Javan503, complete genome	16619-16648	3	0.9
NZ_ALUF01000027_1	1.4\|231022\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	231022-231051	30	MK448833	Streptococcus phage Javan87, complete genome	16853-16882	3	0.9
NZ_ALUF01000027_1	1.17\|231879\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT,PILER-CR	231879-231908	30	MK448852	Streptococcus phage Javan140, complete genome	16835-16864	3	0.9
NZ_ALUF01000027_1	1.17\|231879\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT,PILER-CR	231879-231908	30	MK448871	Streptococcus phage Javan196, complete genome	17871-17900	3	0.9
NZ_ALUF01000027_1	1.17\|231879\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT,PILER-CR	231879-231908	30	MK448784	Streptococcus phage Javan505, complete genome	17908-17937	3	0.9
NZ_ALUF01000027_1	1.17\|231879\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT,PILER-CR	231879-231908	30	MK448952	Streptococcus phage Javan472, complete genome	17405-17434	3	0.9
NZ_ALUF01000027_1	1.17\|231879\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT,PILER-CR	231879-231908	30	MK448779	Streptococcus phage Javan497, complete genome	16648-16677	3	0.9
NZ_ALUF01000027_1	1.17\|231879\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT,PILER-CR	231879-231908	30	MK448947	Streptococcus phage Javan458, complete genome	17908-17937	3	0.9
NZ_ALUF01000027_1	1.17\|231879\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT,PILER-CR	231879-231908	30	MK448961	Streptococcus phage Javan494, complete genome	16832-16861	3	0.9
NZ_ALUF01000027_1	1.17\|231879\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT,PILER-CR	231879-231908	30	MK448697	Streptococcus phage Javan185, complete genome	17871-17900	3	0.9
NZ_ALUF01000027_1	1.17\|231879\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT,PILER-CR	231879-231908	30	MK448968	Streptococcus phage Javan512, complete genome	16648-16677	3	0.9
NZ_ALUF01000027_1	1.17\|231879\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT,PILER-CR	231879-231908	30	MK448693	Streptococcus phage Javan177, complete genome	17871-17900	3	0.9
NZ_ALUF01000027_1	1.17\|231879\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT,PILER-CR	231879-231908	30	MK448766	Streptococcus phage Javan465, complete genome	17799-17828	3	0.9
NZ_ALUF01000027_1	1.17\|231879\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT,PILER-CR	231879-231908	30	MK448696	Streptococcus phage Javan183, complete genome	17871-17900	3	0.9
NZ_ALUF01000027_1	1.17\|231879\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT,PILER-CR	231879-231908	30	NC_009819	Streptococcus phage P9, complete genome	17056-17085	3	0.9
NZ_ALUF01000027_1	1.17\|231879\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT,PILER-CR	231879-231908	30	MK448797	Streptococcus phage Javan531, complete genome	16648-16677	3	0.9
NZ_ALUF01000027_1	1.17\|231879\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT,PILER-CR	231879-231908	30	MK448689	Streptococcus phage Javan163, complete genome	17908-17937	3	0.9
NZ_ALUF01000027_1	1.17\|231879\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT,PILER-CR	231879-231908	30	MK448868	Streptococcus phage Javan188, complete genome	17871-17900	3	0.9
NZ_ALUF01000027_1	1.17\|231879\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT,PILER-CR	231879-231908	30	MK448866	Streptococcus phage Javan184, complete genome	17871-17900	3	0.9
NZ_ALUF01000027_1	1.17\|231879\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT,PILER-CR	231879-231908	30	MK448974	Streptococcus phage Javan524, complete genome	17908-17937	3	0.9
NZ_ALUF01000027_1	1.17\|231879\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT,PILER-CR	231879-231908	30	MK448699	Streptococcus phage Javan189, complete genome	17871-17900	3	0.9
NZ_ALUF01000027_1	1.17\|231879\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT,PILER-CR	231879-231908	30	MK448789	Streptococcus phage Javan513, complete genome	17907-17936	3	0.9
NZ_ALUF01000027_1	1.17\|231879\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT,PILER-CR	231879-231908	30	MK448678	Streptococcus phage Javan135, complete genome	16823-16852	3	0.9
NZ_ALUF01000027_1	1.17\|231879\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT,PILER-CR	231879-231908	30	NC_004589	Streptococcus prophage 315.6, complete genome	16745-16774	3	0.9
NZ_ALUF01000027_1	1.17\|231879\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT,PILER-CR	231879-231908	30	MK448867	Streptococcus phage Javan186, complete genome	17871-17900	3	0.9
NZ_ALUF01000027_1	1.5\|231088\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	231088-231117	30	MK448783	Streptococcus phage Javan503, complete genome	22252-22281	4	0.867
NZ_ALUF01000027_1	1.17\|231879\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT,PILER-CR	231879-231908	30	MK448976	Streptococcus phage Javan528, complete genome	16832-16861	4	0.867
NZ_ALUF01000027_1	1.19\|232011\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT	232011-232040	30	MN694611	Marine virus AFVG_250M767, complete genome	22414-22443	4	0.867
NZ_ALUF01000027_1	1.19\|232011\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT	232011-232040	30	NC_000906	Lactococcus lactis IL964 plasmid pIL105, complete sequence	8338-8367	4	0.867
NZ_ALUF01000027_1	1.1\|230824\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	230824-230853	30	NZ_CP009639	Bacillus cereus 03BB108 plasmid pBFI_1, complete sequence	245601-245630	5	0.833
NZ_ALUF01000027_1	1.1\|230824\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	230824-230853	30	NZ_CP053963	Bacillus cereus strain FDAARGOS_802 plasmid unnamed3, complete sequence	5176-5205	5	0.833
NZ_ALUF01000027_1	1.2\|230890\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	230890-230919	30	MN693834	Marine virus AFVG_250M755, complete genome	22674-22703	5	0.833
NZ_ALUF01000027_1	1.2\|230890\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	230890-230919	30	MN694396	Marine virus AFVG_250M754, complete genome	22673-22702	5	0.833
NZ_ALUF01000027_1	1.2\|230890\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	230890-230919	30	MN694618	Marine virus AFVG_250M753, complete genome	22434-22463	5	0.833
NZ_ALUF01000027_1	1.5\|231088\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	231088-231117	30	NZ_CP019362	Borrelia turicatae 91E135 isolate Oz1 plasmid cp31, complete sequence	16801-16830	5	0.833
NZ_ALUF01000027_1	1.9\|231352\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	231352-231381	30	NZ_CP018188	Streptococcus salivarius strain ICDC2 plasmid, complete sequence	74110-74139	5	0.833
NZ_ALUF01000027_1	1.15\|231747\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT,PILER-CR	231747-231776	30	NZ_CP011513	Paenibacillus peoriae strain HS311 plasmid unnamed, complete sequence	27744-27773	5	0.833
NZ_ALUF01000027_1	1.19\|232011\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT	232011-232040	30	NZ_CP013615	Clostridium perfringens strain JP838 plasmid pJFP838A, complete sequence	297013-297042	5	0.833
NZ_ALUF01000027_1	1.19\|232011\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT	232011-232040	30	NZ_CP012498	Escherichia coli strain 06-00048 plasmid pCFSAN004178P_02, complete sequence	153450-153479	5	0.833
NZ_ALUF01000027_1	1.19\|232011\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT	232011-232040	30	NZ_CP042296	Escherichia coli strain RM9088 plasmid p1RM9088, complete sequence	97416-97445	5	0.833
NZ_ALUF01000027_1	1.19\|232011\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT	232011-232040	30	NZ_CP014570	Campylobacter fetus subsp. venerealis strain 01/165 plasmid mp2, complete sequence	24188-24217	5	0.833
NZ_ALUF01000027_1	1.1\|230824\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	230824-230853	30	NZ_CP023514	Enterococcus sp. FDAARGOS_375 plasmid unnamed1, complete sequence	78475-78504	6	0.8
NZ_ALUF01000027_1	1.1\|230824\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	230824-230853	30	JQ797329	Listeria phage vB_LmoM_AG20, complete genome	2216-2245	6	0.8
NZ_ALUF01000027_1	1.5\|231088\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	231088-231117	30	KT895374	Bacillus phage vB_BpuM-BpSp, complete genome	94932-94961	6	0.8
NZ_ALUF01000027_1	1.11\|231483\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT,PILER-CR	231483-231512	30	AP014200	Uncultured Mediterranean phage uvMED isolate uvMED-GF-C74-MedDCM-OCT-S33-C73, * SEQUENCING IN PROGRESS *	4884-4913	6	0.8
NZ_ALUF01000027_1	1.14\|231681\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT,PILER-CR	231681-231710	30	NZ_LR215032	Mycoplasma gallopavonis strain NCTC10186 plasmid 2	254562-254591	6	0.8
NZ_ALUF01000027_1	1.14\|231681\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT,PILER-CR	231681-231710	30	NC_015221	Nitrosomonas sp. AL212 plasmid pNAL21202, complete sequence	36090-36119	6	0.8
NZ_ALUF01000027_1	1.15\|231747\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT,PILER-CR	231747-231776	30	NZ_CP053953	Bacillus cereus strain FDAARGOS_798 plasmid unnamed2, complete sequence	84926-84955	6	0.8
NZ_ALUF01000027_1	1.15\|231747\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT,PILER-CR	231747-231776	30	NZ_CP053950	Bacillus cereus strain FDAARGOS_799 plasmid unnamed2, complete sequence	307296-307325	6	0.8
NZ_ALUF01000027_1	1.18\|231945\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT,PILER-CR	231945-231974	30	NZ_CP009639	Bacillus cereus 03BB108 plasmid pBFI_1, complete sequence	34310-34339	6	0.8
NZ_ALUF01000027_1	1.18\|231945\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT,PILER-CR	231945-231974	30	NZ_CP053963	Bacillus cereus strain FDAARGOS_802 plasmid unnamed3, complete sequence	75843-75872	6	0.8
NZ_ALUF01000027_1	1.18\|231945\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT,PILER-CR	231945-231974	30	MN693532	Marine virus AFVG_25M340, complete genome	5249-5278	6	0.8
NZ_ALUF01000027_1	1.19\|232011\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT	232011-232040	30	NZ_CP013615	Clostridium perfringens strain JP838 plasmid pJFP838A, complete sequence	148832-148861	6	0.8
NZ_ALUF01000027_1	1.19\|232011\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT	232011-232040	30	NZ_KX086582	Staphylococcus aureus strain WBG1024 plasmid pWBG637, complete sequence	10057-10086	6	0.8
NZ_ALUF01000027_1	1.19\|232011\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT	232011-232040	30	NZ_MH587575	Staphylococcus aureus strain WBG4880 plasmid pWBG637, complete sequence	2185-2214	6	0.8
NZ_ALUF01000027_1	1.21\|232143\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT,PILER-CR	232143-232172	30	NC_016748	Marinitoga piezophila KA3 plasmid pMARPI01, complete sequence	12197-12226	6	0.8
NZ_ALUF01000027_1	1.21\|232143\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT,PILER-CR	232143-232172	30	MN693238	Marine virus AFVG_25M402, complete genome	19463-19492	6	0.8
NZ_ALUF01000027_1	1.22\|232209\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT,PILER-CR	232209-232238	30	NZ_CP020434	Bacillus sp. FDAARGOS_235 plasmid 1, complete sequence	18858-18887	6	0.8
NZ_ALUF01000027_1	1.1\|230824\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	230824-230853	30	NZ_CP024414	Lactobacillus plantarum strain ATCC 8014 plasmid pLP49, complete sequence	17050-17079	7	0.767
NZ_ALUF01000027_1	1.1\|230824\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	230824-230853	30	NC_011101	Lactobacillus plantarum plasmid pLTK13, complete sequence	33868-33897	7	0.767
NZ_ALUF01000027_1	1.1\|230824\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	230824-230853	30	NZ_CP030883	Lactobacillus plantarum strain nF1 plasmid unnamed2, complete sequence	25925-25954	7	0.767
NZ_ALUF01000027_1	1.1\|230824\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	230824-230853	30	NZ_CP025283	Lactobacillus plantarum subsp. plantarum strain nF1-FD plasmid pnF1FD02, complete sequence	2068-2097	7	0.767
NZ_ALUF01000027_1	1.1\|230824\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	230824-230853	30	NZ_KU513859	Listeria monocytogenes strain IZSAM_Lm_15_17439_A144 plasmid pLmA144, complete sequence	47542-47571	7	0.767
NZ_ALUF01000027_1	1.1\|230824\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	230824-230853	30	NZ_CP030934	Enterococcus gilvus strain CR1 plasmid pCR1B, complete sequence	20525-20554	7	0.767
NZ_ALUF01000027_1	1.1\|230824\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	230824-230853	30	MK134858	Listeria monocytogenes plasmid pLM1686, complete sequence	55905-55934	7	0.767
NZ_ALUF01000027_1	1.1\|230824\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	230824-230853	30	NZ_CP013725	Listeria monocytogenes strain Lm N1546 plasmid pLmN1546, complete sequence	56810-56839	7	0.767
NZ_ALUF01000027_1	1.1\|230824\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	230824-230853	30	NZ_HG813248	Listeria monocytogenes R479a plasmid pLMR479a, complete sequence	47542-47571	7	0.767
NZ_ALUF01000027_1	1.2\|230890\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	230890-230919	30	MT661596	Proteus phage 10, complete genome	64109-64138	7	0.767
NZ_ALUF01000027_1	1.5\|231088\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	231088-231117	30	CP009912	Borreliella chilensis strain VA1 plasmid lp54, complete sequence	27825-27854	7	0.767
NZ_ALUF01000027_1	1.5\|231088\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	231088-231117	30	MT774407	CrAssphage cr125_1, complete genome	78895-78924	7	0.767
NZ_ALUF01000027_1	1.5\|231088\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	231088-231117	30	MT774404	CrAssphage cr114_1, complete genome	30093-30122	7	0.767
NZ_ALUF01000027_1	1.16\|231813\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT,PILER-CR	231813-231842	30	NC_021529	Vibrio phage nt-1, complete genome	154464-154493	7	0.767
NZ_ALUF01000027_1	1.16\|231813\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT,PILER-CR	231813-231842	30	NZ_CP015644	Staphylococcus simulans strain MR1 plasmid unnamed2, complete sequence	3534-3563	7	0.767
NZ_ALUF01000027_1	1.16\|231813\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT,PILER-CR	231813-231842	30	NZ_CP017431	Staphylococcus simulans strain MR4 plasmid unnamed4, complete sequence	91076-91105	7	0.767
NZ_ALUF01000027_1	1.16\|231813\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT,PILER-CR	231813-231842	30	NZ_CP017429	Staphylococcus simulans strain MR3 plasmid unnamed5, complete sequence	56635-56664	7	0.767
NZ_ALUF01000027_1	1.16\|231813\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT,PILER-CR	231813-231842	30	NZ_CP016158	Staphylococcus simulans strain MR2 plasmid unnamed1	55780-55809	7	0.767
NZ_ALUF01000027_1	1.19\|232011\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT	232011-232040	30	NZ_CP015331	Borrelia hermsii HS1 isolate Browne Mountain plasmid lpN31, complete sequence	10142-10171	7	0.767
NZ_ALUF01000027_1	1.19\|232011\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT	232011-232040	30	KR131710	Fusobacterium phage Funu1, complete genome	4479-4508	7	0.767
NZ_ALUF01000027_1	1.19\|232011\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT	232011-232040	30	NC_015716	Zymomonas mobilis subsp. pomaceae ATCC 29192 plasmid pZYMOP02, complete sequence	14286-14315	7	0.767
NZ_ALUF01000027_1	1.19\|232011\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT	232011-232040	30	NZ_AP019552	Athalassotoga saccharophila strain NAS-01 plasmid pATS1, complete sequence	19763-19792	7	0.767
NZ_ALUF01000027_1	1.19\|232011\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT	232011-232040	30	NZ_CP029455	Bacillus cereus strain FORC087 plasmid pFORC087.1, complete sequence	160081-160110	7	0.767
NZ_ALUF01000027_1	1.19\|232011\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT	232011-232040	30	NC_010418	Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence	145411-145440	7	0.767
NZ_ALUF01000027_1	1.19\|232011\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT	232011-232040	30	NC_002137	Lactococcus lactis cremoris NIZO B40 plasmid pNZ4000, complete sequence	18084-18113	7	0.767
NZ_ALUF01000027_1	1.19\|232011\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT	232011-232040	30	NZ_CP041739	Enterococcus faecalis EnGen0107 strain B594 plasmid p1, complete sequence	39344-39373	7	0.767
NZ_ALUF01000027_1	1.19\|232011\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT	232011-232040	30	NZ_CP040940	Cetia pacifica strain TB6 plasmid unnamed1, complete sequence	8078-8107	7	0.767
NZ_ALUF01000027_1	1.19\|232011\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT	232011-232040	30	NZ_CP013715	Staphylococcus equorum strain C2014 plasmid pC2014-1, complete sequence	32977-33006	7	0.767
NZ_ALUF01000027_1	1.19\|232011\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT	232011-232040	30	NZ_AP014867	Bacillus thuringiensis serovar tolworthi strain Pasteur Institute Standard strain plasmid pKK3, complete sequence	37308-37337	7	0.767
NZ_ALUF01000027_1	1.19\|232011\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT	232011-232040	30	NZ_CP030046	Enterococcus faecalis strain C54 plasmid pC54, complete sequence	53790-53819	7	0.767
NZ_ALUF01000027_1	1.19\|232011\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT	232011-232040	30	NC_021158	Psychrobacter maritimus plasmid pKLH80, strain MR29-12, complete sequence	4595-4624	7	0.767
NZ_ALUF01000027_1	1.19\|232011\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT	232011-232040	30	NZ_CP040501	Lactobacillus paragasseri JV-V03 plasmid unnamed1, complete sequence	21173-21202	7	0.767
NZ_ALUF01000027_1	1.19\|232011\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT	232011-232040	30	NZ_CP030043	Enterococcus faecalis strain C25 plasmid pC25-1, complete sequence	36507-36536	7	0.767
NZ_ALUF01000027_1	1.20\|232077\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT,PILER-CR	232077-232106	30	NZ_CP053978	Bacillus thuringiensis strain FDAARGOS_795 plasmid unnamed2, complete sequence	15650-15679	7	0.767
NZ_ALUF01000027_1	1.20\|232077\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT,PILER-CR	232077-232106	30	NZ_CP009333	Bacillus thuringiensis strain HD1011 plasmid 4, complete sequence	29555-29584	7	0.767
NZ_ALUF01000027_1	1.21\|232143\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT,PILER-CR	232143-232172	30	MT074464	Salmonella phage bobsandoy, complete genome	51672-51701	7	0.767
NZ_ALUF01000027_1	1.1\|230824\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	230824-230853	30	NZ_CP015355	Bacillus thuringiensis strain MYBT18246 plasmid p109822, complete sequence	65541-65570	8	0.733
NZ_ALUF01000027_1	1.2\|230890\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	230890-230919	30	NC_015911	Borreliella bissettii DN127 plasmid cp9, complete sequence	141-170	8	0.733
NZ_ALUF01000027_1	1.4\|231022\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	231022-231051	30	MK733259	Yersinia phage YeP1, complete genome	37149-37178	8	0.733
NZ_ALUF01000027_1	1.4\|231022\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	231022-231051	30	MK733261	Yersinia phage YeP3, complete genome	37409-37438	8	0.733
NZ_ALUF01000027_1	1.4\|231022\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	231022-231051	30	MK733260	Yersinia phage YeP2, complete genome	37409-37438	8	0.733
NZ_ALUF01000027_1	1.4\|231022\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	231022-231051	30	NZ_CP026760	Klebsiella aerogenes strain AR_0062 plasmid unnamed4	4636-4665	8	0.733
NZ_ALUF01000027_1	1.4\|231022\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	231022-231051	30	NZ_CP026760	Klebsiella aerogenes strain AR_0062 plasmid unnamed4	12354-12383	8	0.733
NZ_ALUF01000027_1	1.4\|231022\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	231022-231051	30	NZ_CP014747	Klebsiella aerogenes strain FDAARGOS_139 plasmid unnamed	18688-18717	8	0.733
NZ_ALUF01000027_1	1.4\|231022\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	231022-231051	30	NZ_CP014747	Klebsiella aerogenes strain FDAARGOS_139 plasmid unnamed	71081-71110	8	0.733
NZ_ALUF01000027_1	1.4\|231022\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	231022-231051	30	NZ_CP014747	Klebsiella aerogenes strain FDAARGOS_139 plasmid unnamed	78799-78828	8	0.733
NZ_ALUF01000027_1	1.5\|231088\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	231088-231117	30	MF547662	Clostridioides phage LIBA6276, complete genome	75156-75185	8	0.733
NZ_ALUF01000027_1	1.5\|231088\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	231088-231117	30	MF547663	Clostridioides phage LIBA2945, complete genome	73879-73908	8	0.733
NZ_ALUF01000027_1	1.9\|231352\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	231352-231381	30	NC_019691	Synechococcus sp. PCC 7502 plasmid pSYN7502.01, complete sequence	52948-52977	8	0.733
NZ_ALUF01000027_1	1.11\|231483\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT,PILER-CR	231483-231512	30	NZ_LR214939	Mycoplasma salivarium strain NCTC10113 plasmid 2	476022-476051	8	0.733
NZ_ALUF01000027_1	1.15\|231747\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT,PILER-CR	231747-231776	30	AP014693	Ralstonia phage RSL2 DNA, complete sequence	166708-166737	8	0.733
NZ_ALUF01000027_1	1.19\|232011\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT	232011-232040	30	MN693026	Marine virus AFVG_117M72, complete genome	59691-59720	8	0.733
NZ_ALUF01000027_1	1.19\|232011\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT	232011-232040	30	MN693034	Marine virus AFVG_117M74, complete genome	27296-27325	8	0.733
NZ_ALUF01000027_1	1.19\|232011\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT	232011-232040	30	NC_016748	Marinitoga piezophila KA3 plasmid pMARPI01, complete sequence	6087-6116	8	0.733
NZ_ALUF01000027_1	1.19\|232011\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT	232011-232040	30	NZ_MF547664	Clostridioides difficile strain LIBA-6289 plasmid LIBA6289, complete sequence	43570-43599	8	0.733
NZ_ALUF01000027_1	1.19\|232011\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT	232011-232040	30	MH572383	Microviridae sp. isolate SD_SF_24, complete genome	2226-2255	8	0.733
NZ_ALUF01000027_1	1.19\|232011\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT	232011-232040	30	MN693588	Marine virus AFVG_25M366, complete genome	2717-2746	8	0.733
NZ_ALUF01000027_1	1.6\|231154\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	231154-231183	30	NZ_CP015630	Borrelia turicatae strain BTE5EL plasmid lp159	49369-49398	9	0.7
NZ_ALUF01000027_1	1.8\|231286\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	231286-231315	30	NC_019782	Lactobacillus phage AQ113, complete genome	32861-32890	9	0.7
NZ_ALUF01000027_1	1.16\|231813\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT,PILER-CR	231813-231842	30	NZ_CP037949	Erwinia sp. QL-Z3 plasmid unnamed1, complete sequence	47249-47278	9	0.7
NZ_ALUF01000027_1	1.16\|231813\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT,PILER-CR	231813-231842	30	NZ_MG973074	Clostridioides difficile strain HSJD-312 plasmid pHSJD-312, complete sequence	10840-10869	9	0.7
NZ_ALUF01000027_1	1.19\|232011\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT	232011-232040	30	NC_021623	Borrelia hermsii strain HS1 plasmid lp174, complete sequence	42456-42485	9	0.7
NZ_ALUF01000027_1	1.19\|232011\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT	232011-232040	30	NZ_CP014350	Borrelia hermsii HS1 isolate Browne Mountain plasmid megaplasmid, complete sequence	47036-47065	9	0.7
NZ_ALUF01000027_1	1.20\|232077\|30\|NZ_ALUF01000027\|CRISPRCasFinder,CRT,PILER-CR	232077-232106	30	LT960608	Bacillus phage SBSphiJ genome assembly, complete genome: monopartite	66240-66269	9	0.7
NZ_ALUF01000027_1	1.1\|230824\|30\|NZ_ALUF01000027\|PILER-CR,CRISPRCasFinder,CRT	230824-230853	30	KX228400	Clostridium phage CDKM15, complete genome	26-55	10	0.667

1. spacer 1.5|231088|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to MK448798 (Streptococcus phage Javan533, complete genome) position: , mismatch: 0, identity: 1.0

taatatttttactaaagtgttaaatacaaa	CRISPR spacer
taatatttttactaaagtgttaaatacaaa	Protospacer
******************************

2. spacer 1.5|231088|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to NC_028700 (Streptococcus phage T12, complete genome) position: , mismatch: 0, identity: 1.0

taatatttttactaaagtgttaaatacaaa	CRISPR spacer
taatatttttactaaagtgttaaatacaaa	Protospacer
******************************

3. spacer 1.5|231088|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to MK448790 (Streptococcus phage Javan515, complete genome) position: , mismatch: 0, identity: 1.0

taatatttttactaaagtgttaaatacaaa	CRISPR spacer
taatatttttactaaagtgttaaatacaaa	Protospacer
******************************

4. spacer 1.5|231088|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to MK448967 (Streptococcus phage Javan510, complete genome) position: , mismatch: 0, identity: 1.0

taatatttttactaaagtgttaaatacaaa	CRISPR spacer
taatatttttactaaagtgttaaatacaaa	Protospacer
******************************

5. spacer 1.5|231088|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to NC_004588 (Streptococcus prophage 315.5, complete genome) position: , mismatch: 0, identity: 1.0

taatatttttactaaagtgttaaatacaaa	CRISPR spacer
taatatttttactaaagtgttaaatacaaa	Protospacer
******************************

6. spacer 1.7|231220|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to MK448852 (Streptococcus phage Javan140, complete genome) position: , mismatch: 0, identity: 1.0

caaatatctagcgactggctcatattcatc	CRISPR spacer
caaatatctagcgactggctcatattcatc	Protospacer
******************************

7. spacer 1.7|231220|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to MK448784 (Streptococcus phage Javan505, complete genome) position: , mismatch: 0, identity: 1.0

caaatatctagcgactggctcatattcatc	CRISPR spacer
caaatatctagcgactggctcatattcatc	Protospacer
******************************

8. spacer 1.7|231220|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to MK448947 (Streptococcus phage Javan458, complete genome) position: , mismatch: 0, identity: 1.0

caaatatctagcgactggctcatattcatc	CRISPR spacer
caaatatctagcgactggctcatattcatc	Protospacer
******************************

9. spacer 1.7|231220|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to NC_009819 (Streptococcus phage P9, complete genome) position: , mismatch: 0, identity: 1.0

caaatatctagcgactggctcatattcatc	CRISPR spacer
caaatatctagcgactggctcatattcatc	Protospacer
******************************

10. spacer 1.7|231220|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to MK448689 (Streptococcus phage Javan163, complete genome) position: , mismatch: 0, identity: 1.0

caaatatctagcgactggctcatattcatc	CRISPR spacer
caaatatctagcgactggctcatattcatc	Protospacer
******************************

11. spacer 1.7|231220|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to MK448974 (Streptococcus phage Javan524, complete genome) position: , mismatch: 0, identity: 1.0

caaatatctagcgactggctcatattcatc	CRISPR spacer
caaatatctagcgactggctcatattcatc	Protospacer
******************************

12. spacer 1.7|231220|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to MK448789 (Streptococcus phage Javan513, complete genome) position: , mismatch: 0, identity: 1.0

caaatatctagcgactggctcatattcatc	CRISPR spacer
caaatatctagcgactggctcatattcatc	Protospacer
******************************

13. spacer 1.7|231220|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to MK448678 (Streptococcus phage Javan135, complete genome) position: , mismatch: 0, identity: 1.0

caaatatctagcgactggctcatattcatc	CRISPR spacer
caaatatctagcgactggctcatattcatc	Protospacer
******************************

14. spacer 1.8|231286|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044104 (Streptococcus dysgalactiae strain FDAARGOS_654 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

cctgaaattggctgatatttttgatgagtt	CRISPR spacer
cctgaaattggctgatatttttgatgagtt	Protospacer
******************************

15. spacer 1.8|231286|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KJ951051 (Streptococcus dysgalactiae subsp. equisimilis strain G279 plasmid pG279, complete sequence) position: , mismatch: 0, identity: 1.0

cctgaaattggctgatatttttgatgagtt	CRISPR spacer
cctgaaattggctgatatttttgatgagtt	Protospacer
******************************

16. spacer 1.8|231286|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to NC_006130 (Streptococcus pyogenes 71-724 plasmid pDN571, complete sequence) position: , mismatch: 0, identity: 1.0

cctgaaattggctgatatttttgatgagtt	CRISPR spacer
cctgaaattggctgatatttttgatgagtt	Protospacer
******************************

17. spacer 1.10|231418|29|NZ_ALUF01000027|CRISPRCasFinder,CRT matches to MK448829 (Streptococcus phage Javan7, complete genome) position: , mismatch: 0, identity: 1.0

ccgattatttcctacataatacgcacgtt	CRISPR spacer
ccgattatttcctacataatacgcacgtt	Protospacer
*****************************

18. spacer 1.10|231418|29|NZ_ALUF01000027|CRISPRCasFinder,CRT matches to MK448956 (Streptococcus phage Javan48, complete genome) position: , mismatch: 0, identity: 1.0

ccgattatttcctacataatacgcacgtt	CRISPR spacer
ccgattatttcctacataatacgcacgtt	Protospacer
*****************************

19. spacer 1.10|231418|29|NZ_ALUF01000027|CRISPRCasFinder,CRT matches to MK448749 (Streptococcus phage Javan39, complete genome) position: , mismatch: 0, identity: 1.0

ccgattatttcctacataatacgcacgtt	CRISPR spacer
ccgattatttcctacataatacgcacgtt	Protospacer
*****************************

20. spacer 1.10|231418|29|NZ_ALUF01000027|CRISPRCasFinder,CRT matches to MH853355 (Streptococcus phage LF1, complete genome) position: , mismatch: 0, identity: 1.0

ccgattatttcctacataatacgcacgtt	CRISPR spacer
ccgattatttcctacataatacgcacgtt	Protospacer
*****************************

21. spacer 1.10|231418|29|NZ_ALUF01000027|CRISPRCasFinder,CRT matches to MH853356 (Streptococcus phage LF2, partial genome) position: , mismatch: 0, identity: 1.0

ccgattatttcctacataatacgcacgtt	CRISPR spacer
ccgattatttcctacataatacgcacgtt	Protospacer
*****************************

22. spacer 1.10|231418|29|NZ_ALUF01000027|CRISPRCasFinder,CRT matches to MK448837 (Streptococcus phage Javan10, complete genome) position: , mismatch: 0, identity: 1.0

ccgattatttcctacataatacgcacgtt	CRISPR spacer
ccgattatttcctacataatacgcacgtt	Protospacer
*****************************

23. spacer 1.10|231418|29|NZ_ALUF01000027|CRISPRCasFinder,CRT matches to MH853358 (Streptococcus phage LF4, complete genome) position: , mismatch: 0, identity: 1.0

ccgattatttcctacataatacgcacgtt	CRISPR spacer
ccgattatttcctacataatacgcacgtt	Protospacer
*****************************

24. spacer 1.13|231615|30|NZ_ALUF01000027|CRISPRCasFinder,CRT,PILER-CR matches to MK448796 (Streptococcus phage Javan53, complete genome) position: , mismatch: 0, identity: 1.0

ggtgagggtgcgtaggatagctgacaaact	CRISPR spacer
ggtgagggtgcgtaggatagctgacaaact	Protospacer
******************************

25. spacer 1.16|231813|30|NZ_ALUF01000027|CRISPRCasFinder,CRT,PILER-CR matches to MK448971 (Streptococcus phage Javan52, complete genome) position: , mismatch: 0, identity: 1.0

tattatcaaaatattctttggcgaattcat	CRISPR spacer
tattatcaaaatattctttggcgaattcat	Protospacer
******************************

26. spacer 1.16|231813|30|NZ_ALUF01000027|CRISPRCasFinder,CRT,PILER-CR matches to MH853356 (Streptococcus phage LF2, partial genome) position: , mismatch: 0, identity: 1.0

tattatcaaaatattctttggcgaattcat	CRISPR spacer
tattatcaaaatattctttggcgaattcat	Protospacer
******************************

27. spacer 1.17|231879|30|NZ_ALUF01000027|CRISPRCasFinder,CRT,PILER-CR matches to MK448729 (Streptococcus phage Javan31, complete genome) position: , mismatch: 0, identity: 1.0

cattacagtctttgagcaaggttatatgct	CRISPR spacer
cattacagtctttgagcaaggttatatgct	Protospacer
******************************

28. spacer 1.17|231879|30|NZ_ALUF01000027|CRISPRCasFinder,CRT,PILER-CR matches to MK448691 (Streptococcus phage Javan17, complete genome) position: , mismatch: 0, identity: 1.0

cattacagtctttgagcaaggttatatgct	CRISPR spacer
cattacagtctttgagcaaggttatatgct	Protospacer
******************************

29. spacer 1.17|231879|30|NZ_ALUF01000027|CRISPRCasFinder,CRT,PILER-CR matches to MK448948 (Streptococcus phage Javan46, complete genome) position: , mismatch: 0, identity: 1.0

cattacagtctttgagcaaggttatatgct	CRISPR spacer
cattacagtctttgagcaaggttatatgct	Protospacer
******************************

30. spacer 1.18|231945|30|NZ_ALUF01000027|CRISPRCasFinder,CRT,PILER-CR matches to MK448673 (Streptococcus phage Javan119, complete genome) position: , mismatch: 0, identity: 1.0

agctattgctcaaaaaagagtaacagctca	CRISPR spacer
agctattgctcaaaaaagagtaacagctca	Protospacer
******************************

31. spacer 1.19|232011|30|NZ_ALUF01000027|CRISPRCasFinder,CRT matches to JX409895 (Streptococcus phage JX01, complete genome) position: , mismatch: 0, identity: 1.0

tttttctattttatttatttcaatagcatc	CRISPR spacer
tttttctattttatttatttcaatagcatc	Protospacer
******************************

32. spacer 1.21|232143|30|NZ_ALUF01000027|CRISPRCasFinder,CRT,PILER-CR matches to MK448729 (Streptococcus phage Javan31, complete genome) position: , mismatch: 0, identity: 1.0

aaaacaattgaagagctggagaattacact	CRISPR spacer
aaaacaattgaagagctggagaattacact	Protospacer
******************************

33. spacer 1.21|232143|30|NZ_ALUF01000027|CRISPRCasFinder,CRT,PILER-CR matches to MK448691 (Streptococcus phage Javan17, complete genome) position: , mismatch: 0, identity: 1.0

aaaacaattgaagagctggagaattacact	CRISPR spacer
aaaacaattgaagagctggagaattacact	Protospacer
******************************

34. spacer 1.21|232143|30|NZ_ALUF01000027|CRISPRCasFinder,CRT,PILER-CR matches to MK448948 (Streptococcus phage Javan46, complete genome) position: , mismatch: 0, identity: 1.0

aaaacaattgaagagctggagaattacact	CRISPR spacer
aaaacaattgaagagctggagaattacact	Protospacer
******************************

35. spacer 1.21|232143|30|NZ_ALUF01000027|CRISPRCasFinder,CRT,PILER-CR matches to MK448768 (Streptococcus phage Javan47, complete genome) position: , mismatch: 0, identity: 1.0

aaaacaattgaagagctggagaattacact	CRISPR spacer
aaaacaattgaagagctggagaattacact	Protospacer
******************************

36. spacer 1.3|230956|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to JX409894 (Streptococcus phage LYGO9, complete genome) position: , mismatch: 1, identity: 0.967

actagcgacatgatgtttgcagtaacggct	CRISPR spacer
cctagcgacatgatgtttgcagtaacggct	Protospacer
 *****************************

37. spacer 1.3|230956|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to MK448749 (Streptococcus phage Javan39, complete genome) position: , mismatch: 1, identity: 0.967

actagcgacatgatgtttgcagtaacggct	CRISPR spacer
cctagcgacatgatgtttgcagtaacggct	Protospacer
 *****************************

38. spacer 1.3|230956|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to JX409895 (Streptococcus phage JX01, complete genome) position: , mismatch: 1, identity: 0.967

actagcgacatgatgtttgcagtaacggct	CRISPR spacer
cctagcgacatgatgtttgcagtaacggct	Protospacer
 *****************************

39. spacer 1.3|230956|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to MH853356 (Streptococcus phage LF2, partial genome) position: , mismatch: 1, identity: 0.967

actagcgacatgatgtttgcagtaacggct	CRISPR spacer
cctagcgacatgatgtttgcagtaacggct	Protospacer
 *****************************

40. spacer 1.3|230956|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to MK448708 (Streptococcus phage Javan23, complete genome) position: , mismatch: 1, identity: 0.967

actagcgacatgatgtttgcagtaacggct	CRISPR spacer
cctagcgacatgatgtttgcagtaacggct	Protospacer
 *****************************

41. spacer 1.3|230956|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to MK448897 (Streptococcus phage Javan28, complete genome) position: , mismatch: 1, identity: 0.967

actagcgacatgatgtttgcagtaacggct	CRISPR spacer
cctagcgacatgatgtttgcagtaacggct	Protospacer
 *****************************

42. spacer 1.5|231088|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to MK449010 (Streptococcus phage Javan90, complete genome) position: , mismatch: 1, identity: 0.967

taatatttttactaaagtgttaaatacaaa	CRISPR spacer
taatatttttactaaagtgttaaacacaaa	Protospacer
************************.*****

43. spacer 1.5|231088|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to MK448833 (Streptococcus phage Javan87, complete genome) position: , mismatch: 1, identity: 0.967

taatatttttactaaagtgttaaatacaaa	CRISPR spacer
taatatttttactaaagtgttaaacacaaa	Protospacer
************************.*****

44. spacer 1.6|231154|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to MK448718 (Streptococcus phage Javan253, complete genome) position: , mismatch: 1, identity: 0.967

aggcaatataagagatattagagaaagctt	CRISPR spacer
aggcaatataagggatattagagaaagctt	Protospacer
************.*****************

45. spacer 1.7|231220|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to MK448946 (Streptococcus phage Javan456, complete genome) position: , mismatch: 1, identity: 0.967

caaatatctagcgactggctcatattcatc	CRISPR spacer
caaatacctagcgactggctcatattcatc	Protospacer
******.***********************

46. spacer 1.7|231220|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to MK448952 (Streptococcus phage Javan472, complete genome) position: , mismatch: 1, identity: 0.967

caaatatctagcgactggctcatattcatc	CRISPR spacer
caaatacctagcgactggctcatattcatc	Protospacer
******.***********************

47. spacer 1.7|231220|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to MK448779 (Streptococcus phage Javan497, complete genome) position: , mismatch: 1, identity: 0.967

caaatatctagcgactggctcatattcatc	CRISPR spacer
caaatatctagcgactggttcatattcatc	Protospacer
******************.***********

48. spacer 1.7|231220|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to MK448968 (Streptococcus phage Javan512, complete genome) position: , mismatch: 1, identity: 0.967

caaatatctagcgactggctcatattcatc	CRISPR spacer
caaatatctagcgactggttcatattcatc	Protospacer
******************.***********

49. spacer 1.7|231220|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to MK448797 (Streptococcus phage Javan531, complete genome) position: , mismatch: 1, identity: 0.967

caaatatctagcgactggctcatattcatc	CRISPR spacer
caaatatctagcgactggttcatattcatc	Protospacer
******************.***********

50. spacer 1.7|231220|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to NC_004589 (Streptococcus prophage 315.6, complete genome) position: , mismatch: 1, identity: 0.967

caaatatctagcgactggctcatattcatc	CRISPR spacer
caaatatctagcgactggttcatattcatc	Protospacer
******************.***********

51. spacer 1.9|231352|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to MK448796 (Streptococcus phage Javan53, complete genome) position: , mismatch: 1, identity: 0.967

tcccaaatttgtaactcccaaggatagtag	CRISPR spacer
tcccaaatttgcaactcccaaggatagtag	Protospacer
***********.******************

52. spacer 1.9|231352|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to MK448736 (Streptococcus phage Javan35, complete genome) position: , mismatch: 1, identity: 0.967

tcccaaatttgtaactcccaaggatagtag	CRISPR spacer
tcccaaatttgcaactcccaaggatagtag	Protospacer
***********.******************

53. spacer 1.9|231352|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to MK448781 (Streptococcus phage Javan5, complete genome) position: , mismatch: 1, identity: 0.967

tcccaaatttgtaactcccaaggatagtag	CRISPR spacer
tcccaaatttgcaactcccaaggatagtag	Protospacer
***********.******************

54. spacer 1.9|231352|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to MK448938 (Streptococcus phage Javan44, complete genome) position: , mismatch: 1, identity: 0.967

tcccaaatttgtaactcccaaggatagtag	CRISPR spacer
tcccaaatttgcaactcccaaggatagtag	Protospacer
***********.******************

55. spacer 1.9|231352|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to MK448911 (Streptococcus phage Javan34, complete genome) position: , mismatch: 1, identity: 0.967

tcccaaatttgtaactcccaaggatagtag	CRISPR spacer
tcccaaatttgcaactcccaaggatagtag	Protospacer
***********.******************

56. spacer 1.9|231352|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to MK448916 (Streptococcus phage Javan36, complete genome) position: , mismatch: 1, identity: 0.967

tcccaaatttgtaactcccaaggatagtag	CRISPR spacer
tcccaaatttgcaactcccaaggatagtag	Protospacer
***********.******************

57. spacer 1.12|231549|30|NZ_ALUF01000027|CRISPRCasFinder,CRT,PILER-CR matches to MK448701 (Streptococcus phage Javan197, complete genome) position: , mismatch: 1, identity: 0.967

tctacccacctcccaagctgaaatggctgt	CRISPR spacer
tctgcccacctcccaagctgaaatggctgt	Protospacer
***.**************************

58. spacer 1.12|231549|30|NZ_ALUF01000027|CRISPRCasFinder,CRT,PILER-CR matches to MK448869 (Streptococcus phage Javan190, complete genome) position: , mismatch: 1, identity: 0.967

tctacccacctcccaagctgaaatggctgt	CRISPR spacer
tctgcccacctcccaagctgaaatggctgt	Protospacer
***.**************************

59. spacer 1.12|231549|30|NZ_ALUF01000027|CRISPRCasFinder,CRT,PILER-CR matches to MK448870 (Streptococcus phage Javan192, complete genome) position: , mismatch: 1, identity: 0.967

tctacccacctcccaagctgaaatggctgt	CRISPR spacer
tctgcccacctcccaagctgaaatggctgt	Protospacer
***.**************************

60. spacer 1.17|231879|30|NZ_ALUF01000027|CRISPRCasFinder,CRT,PILER-CR matches to MK448768 (Streptococcus phage Javan47, complete genome) position: , mismatch: 1, identity: 0.967

cattacagtctttgagcaaggttatatgct	CRISPR spacer
cattacagtctttgagcaaggttacatgct	Protospacer
************************.*****

61. spacer 1.18|231945|30|NZ_ALUF01000027|CRISPRCasFinder,CRT,PILER-CR matches to MK448761 (Streptococcus phage Javan445, complete genome) position: , mismatch: 1, identity: 0.967

agctattgctcaaaaaagagtaacagctca	CRISPR spacer
agctattgctcaaaaaaaagtaacagctca	Protospacer
*****************.************

62. spacer 1.18|231945|30|NZ_ALUF01000027|CRISPRCasFinder,CRT,PILER-CR matches to MK448933 (Streptococcus phage Javan420, complete genome) position: , mismatch: 1, identity: 0.967

agctattgctcaaaaaagagtaacagctca	CRISPR spacer
agctattactcaaaaaagagtaacagctca	Protospacer
*******.**********************

63. spacer 1.18|231945|30|NZ_ALUF01000027|CRISPRCasFinder,CRT,PILER-CR matches to MK448760 (Streptococcus phage Javan443, complete genome) position: , mismatch: 1, identity: 0.967

agctattgctcaaaaaagagtaacagctca	CRISPR spacer
agctattgctcaaaaaaaagtaacagctca	Protospacer
*****************.************

64. spacer 1.19|232011|30|NZ_ALUF01000027|CRISPRCasFinder,CRT matches to MK448795 (Streptococcus phage Javan527, complete genome) position: , mismatch: 1, identity: 0.967

tttttctattttatttatttcaatagcatc	CRISPR spacer
tttctctattttatttatttcaatagcatc	Protospacer
***.**************************

65. spacer 1.19|232011|30|NZ_ALUF01000027|CRISPRCasFinder,CRT matches to MK448854 (Streptococcus phage Javan146, complete genome) position: , mismatch: 1, identity: 0.967

tttttctattttatttatttcaatagcatc	CRISPR spacer
tttttcaattttatttatttcaatagcatc	Protospacer
****** ***********************

66. spacer 1.5|231088|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to MK448681 (Streptococcus phage Javan141, complete genome) position: , mismatch: 2, identity: 0.933

taatatttttactaaagtgttaaatacaaa	CRISPR spacer
taacgtttttactaaagtgttaaatacaaa	Protospacer
***..*************************

67. spacer 1.5|231088|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to MK448856 (Streptococcus phage Javan158, complete genome) position: , mismatch: 2, identity: 0.933

taatatttttactaaagtgttaaatacaaa	CRISPR spacer
taacgtttttactaaagtgttaaatacaaa	Protospacer
***..*************************

68. spacer 1.5|231088|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to MK448683 (Streptococcus phage Javan149, complete genome) position: , mismatch: 2, identity: 0.933

taatatttttactaaagtgttaaatacaaa	CRISPR spacer
taacgtttttactaaagtgttaaatacaaa	Protospacer
***..*************************

69. spacer 1.7|231220|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to MK448871 (Streptococcus phage Javan196, complete genome) position: , mismatch: 2, identity: 0.933

caaatatctagcgactggctcatattcatc	CRISPR spacer
caagtacctagcgactggctcatattcatc	Protospacer
***.**.***********************

70. spacer 1.7|231220|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to MK448976 (Streptococcus phage Javan528, complete genome) position: , mismatch: 2, identity: 0.933

caaatatctagcgactggctcatattcatc	CRISPR spacer
caagtacctagcgactggctcatattcatc	Protospacer
***.**.***********************

71. spacer 1.7|231220|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to MK448961 (Streptococcus phage Javan494, complete genome) position: , mismatch: 2, identity: 0.933

caaatatctagcgactggctcatattcatc	CRISPR spacer
caagtacctagcgactggctcatattcatc	Protospacer
***.**.***********************

72. spacer 1.7|231220|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to MK448697 (Streptococcus phage Javan185, complete genome) position: , mismatch: 2, identity: 0.933

caaatatctagcgactggctcatattcatc	CRISPR spacer
caagtacctagcgactggctcatattcatc	Protospacer
***.**.***********************

73. spacer 1.7|231220|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to MK448693 (Streptococcus phage Javan177, complete genome) position: , mismatch: 2, identity: 0.933

caaatatctagcgactggctcatattcatc	CRISPR spacer
caagtacctagcgactggctcatattcatc	Protospacer
***.**.***********************

74. spacer 1.7|231220|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to MK448766 (Streptococcus phage Javan465, complete genome) position: , mismatch: 2, identity: 0.933

caaatatctagcgactggctcatattcatc	CRISPR spacer
caagtacctagcgactggctcatattcatc	Protospacer
***.**.***********************

75. spacer 1.7|231220|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to MK448696 (Streptococcus phage Javan183, complete genome) position: , mismatch: 2, identity: 0.933

caaatatctagcgactggctcatattcatc	CRISPR spacer
caagtacctagcgactggctcatattcatc	Protospacer
***.**.***********************

76. spacer 1.7|231220|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to MK448868 (Streptococcus phage Javan188, complete genome) position: , mismatch: 2, identity: 0.933

caaatatctagcgactggctcatattcatc	CRISPR spacer
caagtacctagcgactggctcatattcatc	Protospacer
***.**.***********************

77. spacer 1.7|231220|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to MK448866 (Streptococcus phage Javan184, complete genome) position: , mismatch: 2, identity: 0.933

caaatatctagcgactggctcatattcatc	CRISPR spacer
caagtacctagcgactggctcatattcatc	Protospacer
***.**.***********************

78. spacer 1.7|231220|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to MK448699 (Streptococcus phage Javan189, complete genome) position: , mismatch: 2, identity: 0.933

caaatatctagcgactggctcatattcatc	CRISPR spacer
caagtacctagcgactggctcatattcatc	Protospacer
***.**.***********************

79. spacer 1.7|231220|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to MK448867 (Streptococcus phage Javan186, complete genome) position: , mismatch: 2, identity: 0.933

caaatatctagcgactggctcatattcatc	CRISPR spacer
caagtacctagcgactggctcatattcatc	Protospacer
***.**.***********************

80. spacer 1.9|231352|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040803 (Streptococcus salivarius strain LAB813 plasmid pSAL813, complete sequence) position: , mismatch: 2, identity: 0.933

tcccaaatttgtaactcccaaggatagtag	CRISPR spacer
tcccagatttgtaactcccaaggataatag	Protospacer
*****.********************.***

81. spacer 1.11|231483|30|NZ_ALUF01000027|CRISPRCasFinder,CRT,PILER-CR matches to MK448895 (Streptococcus phage Javan274, complete genome) position: , mismatch: 2, identity: 0.933

tttgatagtggtgtggttgttatcaggcat	CRISPR spacer
tttgacagtggtgtggttgttattaggcat	Protospacer
*****.*****************.******

82. spacer 1.18|231945|30|NZ_ALUF01000027|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AF027167 (Streptococcus thermophilus strain NDI-6 plasmid pCI65st, complete sequence) position: , mismatch: 2, identity: 0.933

agctattgctcaaaaaagagtaacagctca	CRISPR spacer
agctattactcaaaaaagagtaacagccca	Protospacer
*******.*******************.**

83. spacer 1.18|231945|30|NZ_ALUF01000027|CRISPRCasFinder,CRT,PILER-CR matches to NC_003288 (Staphylococcus phage phiETA, complete genome) position: , mismatch: 2, identity: 0.933

agctattgctcaaaaaagagtaacagctca	CRISPR spacer
agctatcgctcaaaaaagagcaacagctca	Protospacer
******.*************.*********

84. spacer 1.18|231945|30|NZ_ALUF01000027|CRISPRCasFinder,CRT,PILER-CR matches to AP001553 (Staphylococcus phage phiETA DNA, complete genome) position: , mismatch: 2, identity: 0.933

agctattgctcaaaaaagagtaacagctca	CRISPR spacer
agctatcgctcaaaaaagagcaacagctca	Protospacer
******.*************.*********

85. spacer 1.18|231945|30|NZ_ALUF01000027|CRISPRCasFinder,CRT,PILER-CR matches to NC_007061 (Staphylococcus phage 29, complete genome) position: , mismatch: 2, identity: 0.933

agctattgctcaaaaaagagtaacagctca	CRISPR spacer
agctatcgctcaaaaaagagcaacagctca	Protospacer
******.*************.*********

86. spacer 1.18|231945|30|NZ_ALUF01000027|CRISPRCasFinder,CRT,PILER-CR matches to AY508486 (Bacteriophage 77, complete genome) position: , mismatch: 2, identity: 0.933

agctattgctcaaaaaagagtaacagctca	CRISPR spacer
agctatcgctcaaaaaagagcaacagctca	Protospacer
******.*************.*********

87. spacer 1.18|231945|30|NZ_ALUF01000027|CRISPRCasFinder,CRT,PILER-CR matches to NC_005356 (Staphylococcus phage 77, complete genome) position: , mismatch: 2, identity: 0.933

agctattgctcaaaaaagagtaacagctca	CRISPR spacer
agctatcgctcaaaaaagagcaacagctca	Protospacer
******.*************.*********

88. spacer 1.18|231945|30|NZ_ALUF01000027|CRISPRCasFinder,CRT,PILER-CR matches to MF417930 (Uncultured Caudovirales phage clone 3S_1, partial genome) position: , mismatch: 2, identity: 0.933

agctattgctcaaaaaagagtaacagctca	CRISPR spacer
agctatcgctcaaaaaagagcaacagctca	Protospacer
******.*************.*********

89. spacer 1.18|231945|30|NZ_ALUF01000027|CRISPRCasFinder,CRT,PILER-CR matches to NC_007047 (Staphylococcus phage 187, complete genome) position: , mismatch: 2, identity: 0.933

agctattgctcaaaaaagagtaacagctca	CRISPR spacer
agctatcgctcaaaaaagagcaacagctca	Protospacer
******.*************.*********

90. spacer 1.18|231945|30|NZ_ALUF01000027|CRISPRCasFinder,CRT,PILER-CR matches to NC_007058 (Staphylococcus phage ROSA, complete genome) position: , mismatch: 2, identity: 0.933

agctattgctcaaaaaagagtaacagctca	CRISPR spacer
agctcttactcaaaaaagagtaacagctca	Protospacer
**** **.**********************

91. spacer 1.18|231945|30|NZ_ALUF01000027|CRISPRCasFinder,CRT,PILER-CR matches to AY954964 (Bacteriophage 29, complete genome) position: , mismatch: 2, identity: 0.933

agctattgctcaaaaaagagtaacagctca	CRISPR spacer
agctatcgctcaaaaaagagcaacagctca	Protospacer
******.*************.*********

92. spacer 1.18|231945|30|NZ_ALUF01000027|CRISPRCasFinder,CRT,PILER-CR matches to AY954950 (Bacteriophage 187, complete genome) position: , mismatch: 2, identity: 0.933

agctattgctcaaaaaagagtaacagctca	CRISPR spacer
agctatcgctcaaaaaagagcaacagctca	Protospacer
******.*************.*********

93. spacer 1.18|231945|30|NZ_ALUF01000027|CRISPRCasFinder,CRT,PILER-CR matches to MK075004 (Staphylococcus phage phiSP119-1, complete genome) position: , mismatch: 2, identity: 0.933

agctattgctcaaaaaagagtaacagctca	CRISPR spacer
agctatcgctcaaaaaagagcaacagctca	Protospacer
******.*************.*********

94. spacer 1.18|231945|30|NZ_ALUF01000027|CRISPRCasFinder,CRT,PILER-CR matches to KJ452292 (Staphylococcus phage 23MRA, complete genome) position: , mismatch: 2, identity: 0.933

agctattgctcaaaaaagagtaacagctca	CRISPR spacer
agctatcgctcaaaaaagagcaacagctca	Protospacer
******.*************.*********

95. spacer 1.18|231945|30|NZ_ALUF01000027|CRISPRCasFinder,CRT,PILER-CR matches to JX274646 (Staphylococcus phage SP5, complete genome) position: , mismatch: 2, identity: 0.933

agctattgctcaaaaaagagtaacagctca	CRISPR spacer
agctatcgctcaaaaaagagcaacagctca	Protospacer
******.*************.*********

96. spacer 1.18|231945|30|NZ_ALUF01000027|CRISPRCasFinder,CRT,PILER-CR matches to NC_028915 (Staphylococcus phage B236, complete genome) position: , mismatch: 2, identity: 0.933

agctattgctcaaaaaagagtaacagctca	CRISPR spacer
agctcttactcaaaaaagagtaacagctca	Protospacer
**** **.**********************

97. spacer 1.18|231945|30|NZ_ALUF01000027|CRISPRCasFinder,CRT,PILER-CR matches to MF417937 (Uncultured Caudovirales phage clone 10F_6, partial genome) position: , mismatch: 2, identity: 0.933

agctattgctcaaaaaagagtaacagctca	CRISPR spacer
agctattactcaaaaaaaagtaacagctca	Protospacer
*******.*********.************

98. spacer 1.18|231945|30|NZ_ALUF01000027|CRISPRCasFinder,CRT,PILER-CR matches to NC_028821 (Staphylococcus phage StB20-like, complete genome) position: , mismatch: 2, identity: 0.933

agctattgctcaaaaaagagtaacagctca	CRISPR spacer
agctcttactcaaaaaagagtaacagctca	Protospacer
**** **.**********************

99. spacer 1.18|231945|30|NZ_ALUF01000027|CRISPRCasFinder,CRT,PILER-CR matches to AY954961 (Bacteriophage ROSA, complete genome) position: , mismatch: 2, identity: 0.933

agctattgctcaaaaaagagtaacagctca	CRISPR spacer
agctcttactcaaaaaagagtaacagctca	Protospacer
**** **.**********************

100. spacer 1.3|230956|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to MK448851 (Streptococcus phage Javan14, complete genome) position: , mismatch: 3, identity: 0.9

actagcgacatgatgtttgcagtaacggct	CRISPR spacer
cctagcgacatgatgtttgcagtaacagca	Protospacer
 *************************.**

101. spacer 1.4|231022|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to MK449010 (Streptococcus phage Javan90, complete genome) position: , mismatch: 3, identity: 0.9

aatggtggctaacatcagtgacgaatcgtt	CRISPR spacer
tatggttgctaatatcagtgacgaatcgtt	Protospacer
 ***** *****.*****************

102. spacer 1.4|231022|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to MK448790 (Streptococcus phage Javan515, complete genome) position: , mismatch: 3, identity: 0.9

aatggtggctaacatcagtgacgaatcgtt	CRISPR spacer
tatggttgctaatatcagtgacgaatcgtt	Protospacer
 ***** *****.*****************

103. spacer 1.4|231022|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to MK448783 (Streptococcus phage Javan503, complete genome) position: , mismatch: 3, identity: 0.9

aatggtggctaacatcagtgacgaatcgtt	CRISPR spacer
tatggttgctaatatcagtgacgaatcgtt	Protospacer
 ***** *****.*****************

104. spacer 1.4|231022|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to MK448833 (Streptococcus phage Javan87, complete genome) position: , mismatch: 3, identity: 0.9

aatggtggctaacatcagtgacgaatcgtt	CRISPR spacer
tatggttgctaatatcagtgacgaatcgtt	Protospacer
 ***** *****.*****************

105. spacer 1.17|231879|30|NZ_ALUF01000027|CRISPRCasFinder,CRT,PILER-CR matches to MK448852 (Streptococcus phage Javan140, complete genome) position: , mismatch: 3, identity: 0.9

cattacagtctttgagcaaggttatatgct	CRISPR spacer
tattacggtatttgagcaaggttatatgct	Protospacer
.*****.** ********************

106. spacer 1.17|231879|30|NZ_ALUF01000027|CRISPRCasFinder,CRT,PILER-CR matches to MK448871 (Streptococcus phage Javan196, complete genome) position: , mismatch: 3, identity: 0.9

cattacagtctttgagcaaggttatatgct	CRISPR spacer
tattacggtatttgagcaaggttatatgct	Protospacer
.*****.** ********************

107. spacer 1.17|231879|30|NZ_ALUF01000027|CRISPRCasFinder,CRT,PILER-CR matches to MK448784 (Streptococcus phage Javan505, complete genome) position: , mismatch: 3, identity: 0.9

cattacagtctttgagcaaggttatatgct	CRISPR spacer
tattacggtatttgagcaaggttatatgct	Protospacer
.*****.** ********************

108. spacer 1.17|231879|30|NZ_ALUF01000027|CRISPRCasFinder,CRT,PILER-CR matches to MK448952 (Streptococcus phage Javan472, complete genome) position: , mismatch: 3, identity: 0.9

cattacagtctttgagcaaggttatatgct	CRISPR spacer
tattacggtatttgagcaaggttatatgct	Protospacer
.*****.** ********************

109. spacer 1.17|231879|30|NZ_ALUF01000027|CRISPRCasFinder,CRT,PILER-CR matches to MK448779 (Streptococcus phage Javan497, complete genome) position: , mismatch: 3, identity: 0.9

cattacagtctttgagcaaggttatatgct	CRISPR spacer
tattacggtatttgagcaaggttatatgct	Protospacer
.*****.** ********************

110. spacer 1.17|231879|30|NZ_ALUF01000027|CRISPRCasFinder,CRT,PILER-CR matches to MK448947 (Streptococcus phage Javan458, complete genome) position: , mismatch: 3, identity: 0.9

cattacagtctttgagcaaggttatatgct	CRISPR spacer
tattacggtatttgagcaaggttatatgct	Protospacer
.*****.** ********************

111. spacer 1.17|231879|30|NZ_ALUF01000027|CRISPRCasFinder,CRT,PILER-CR matches to MK448961 (Streptococcus phage Javan494, complete genome) position: , mismatch: 3, identity: 0.9

cattacagtctttgagcaaggttatatgct	CRISPR spacer
tattacggtatttgagcaaggttatatgct	Protospacer
.*****.** ********************

112. spacer 1.17|231879|30|NZ_ALUF01000027|CRISPRCasFinder,CRT,PILER-CR matches to MK448697 (Streptococcus phage Javan185, complete genome) position: , mismatch: 3, identity: 0.9

cattacagtctttgagcaaggttatatgct	CRISPR spacer
tattacggtatttgagcaaggttatatgct	Protospacer
.*****.** ********************

113. spacer 1.17|231879|30|NZ_ALUF01000027|CRISPRCasFinder,CRT,PILER-CR matches to MK448968 (Streptococcus phage Javan512, complete genome) position: , mismatch: 3, identity: 0.9

cattacagtctttgagcaaggttatatgct	CRISPR spacer
tattacggtatttgagcaaggttatatgct	Protospacer
.*****.** ********************

114. spacer 1.17|231879|30|NZ_ALUF01000027|CRISPRCasFinder,CRT,PILER-CR matches to MK448693 (Streptococcus phage Javan177, complete genome) position: , mismatch: 3, identity: 0.9

cattacagtctttgagcaaggttatatgct	CRISPR spacer
tattacggtatttgagcaaggttatatgct	Protospacer
.*****.** ********************

115. spacer 1.17|231879|30|NZ_ALUF01000027|CRISPRCasFinder,CRT,PILER-CR matches to MK448766 (Streptococcus phage Javan465, complete genome) position: , mismatch: 3, identity: 0.9

cattacagtctttgagcaaggttatatgct	CRISPR spacer
tattacggtatttgagcaaggttatatgct	Protospacer
.*****.** ********************

116. spacer 1.17|231879|30|NZ_ALUF01000027|CRISPRCasFinder,CRT,PILER-CR matches to MK448696 (Streptococcus phage Javan183, complete genome) position: , mismatch: 3, identity: 0.9

cattacagtctttgagcaaggttatatgct	CRISPR spacer
tattacggtatttgagcaaggttatatgct	Protospacer
.*****.** ********************

117. spacer 1.17|231879|30|NZ_ALUF01000027|CRISPRCasFinder,CRT,PILER-CR matches to NC_009819 (Streptococcus phage P9, complete genome) position: , mismatch: 3, identity: 0.9

cattacagtctttgagcaaggttatatgct	CRISPR spacer
tattacggtatttgagcaaggttatatgct	Protospacer
.*****.** ********************

118. spacer 1.17|231879|30|NZ_ALUF01000027|CRISPRCasFinder,CRT,PILER-CR matches to MK448797 (Streptococcus phage Javan531, complete genome) position: , mismatch: 3, identity: 0.9

cattacagtctttgagcaaggttatatgct	CRISPR spacer
tattacggtatttgagcaaggttatatgct	Protospacer
.*****.** ********************

119. spacer 1.17|231879|30|NZ_ALUF01000027|CRISPRCasFinder,CRT,PILER-CR matches to MK448689 (Streptococcus phage Javan163, complete genome) position: , mismatch: 3, identity: 0.9

cattacagtctttgagcaaggttatatgct	CRISPR spacer
tattacggtatttgagcaaggttatatgct	Protospacer
.*****.** ********************

120. spacer 1.17|231879|30|NZ_ALUF01000027|CRISPRCasFinder,CRT,PILER-CR matches to MK448868 (Streptococcus phage Javan188, complete genome) position: , mismatch: 3, identity: 0.9

cattacagtctttgagcaaggttatatgct	CRISPR spacer
tattacggtatttgagcaaggttatatgct	Protospacer
.*****.** ********************

121. spacer 1.17|231879|30|NZ_ALUF01000027|CRISPRCasFinder,CRT,PILER-CR matches to MK448866 (Streptococcus phage Javan184, complete genome) position: , mismatch: 3, identity: 0.9

cattacagtctttgagcaaggttatatgct	CRISPR spacer
tattacggtatttgagcaaggttatatgct	Protospacer
.*****.** ********************

122. spacer 1.17|231879|30|NZ_ALUF01000027|CRISPRCasFinder,CRT,PILER-CR matches to MK448974 (Streptococcus phage Javan524, complete genome) position: , mismatch: 3, identity: 0.9

cattacagtctttgagcaaggttatatgct	CRISPR spacer
tattacggtatttgagcaaggttatatgct	Protospacer
.*****.** ********************

123. spacer 1.17|231879|30|NZ_ALUF01000027|CRISPRCasFinder,CRT,PILER-CR matches to MK448699 (Streptococcus phage Javan189, complete genome) position: , mismatch: 3, identity: 0.9

cattacagtctttgagcaaggttatatgct	CRISPR spacer
tattacggtatttgagcaaggttatatgct	Protospacer
.*****.** ********************

124. spacer 1.17|231879|30|NZ_ALUF01000027|CRISPRCasFinder,CRT,PILER-CR matches to MK448789 (Streptococcus phage Javan513, complete genome) position: , mismatch: 3, identity: 0.9

cattacagtctttgagcaaggttatatgct	CRISPR spacer
tattacggtatttgagcaaggttatatgct	Protospacer
.*****.** ********************

125. spacer 1.17|231879|30|NZ_ALUF01000027|CRISPRCasFinder,CRT,PILER-CR matches to MK448678 (Streptococcus phage Javan135, complete genome) position: , mismatch: 3, identity: 0.9

cattacagtctttgagcaaggttatatgct	CRISPR spacer
tattacggtatttgagcaaggttatatgct	Protospacer
.*****.** ********************

126. spacer 1.17|231879|30|NZ_ALUF01000027|CRISPRCasFinder,CRT,PILER-CR matches to NC_004589 (Streptococcus prophage 315.6, complete genome) position: , mismatch: 3, identity: 0.9

cattacagtctttgagcaaggttatatgct	CRISPR spacer
tattacggtatttgagcaaggttatatgct	Protospacer
.*****.** ********************

127. spacer 1.17|231879|30|NZ_ALUF01000027|CRISPRCasFinder,CRT,PILER-CR matches to MK448867 (Streptococcus phage Javan186, complete genome) position: , mismatch: 3, identity: 0.9

cattacagtctttgagcaaggttatatgct	CRISPR spacer
tattacggtatttgagcaaggttatatgct	Protospacer
.*****.** ********************

128. spacer 1.5|231088|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to MK448783 (Streptococcus phage Javan503, complete genome) position: , mismatch: 4, identity: 0.867

taatatttttactaaagtgttaaatacaaa	CRISPR spacer
aaacgtttttactaaagtgttaaacacaaa	Protospacer
 **..*******************.*****

129. spacer 1.17|231879|30|NZ_ALUF01000027|CRISPRCasFinder,CRT,PILER-CR matches to MK448976 (Streptococcus phage Javan528, complete genome) position: , mismatch: 4, identity: 0.867

cattacagtctttgagcaaggttatatgct	CRISPR spacer
tattacggtatttgagcaaggttatatggt	Protospacer
.*****.** ****************** *

130. spacer 1.19|232011|30|NZ_ALUF01000027|CRISPRCasFinder,CRT matches to MN694611 (Marine virus AFVG_250M767, complete genome) position: , mismatch: 4, identity: 0.867

tttttctattttatttatttcaatagcatc	CRISPR spacer
tgcttctattttatttatttcaatatcaac	Protospacer
* .********************** ** *

131. spacer 1.19|232011|30|NZ_ALUF01000027|CRISPRCasFinder,CRT matches to NC_000906 (Lactococcus lactis IL964 plasmid pIL105, complete sequence) position: , mismatch: 4, identity: 0.867

tttttctattttatttatttc-aatagcatc	CRISPR spacer
tttttctattttttttatttctaatagttt-	Protospacer
************ ******** *****. *

132. spacer 1.1|230824|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009639 (Bacillus cereus 03BB108 plasmid pBFI_1, complete sequence) position: , mismatch: 5, identity: 0.833

tttttttgaatatataaaaagtccctgcaa	CRISPR spacer
attttttgtatatataaaaagcccctcgaa	Protospacer
 ******* ************.****  **

133. spacer 1.1|230824|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053963 (Bacillus cereus strain FDAARGOS_802 plasmid unnamed3, complete sequence) position: , mismatch: 5, identity: 0.833

tttttttgaatatataaaaagtccctgcaa	CRISPR spacer
attttttgtatatataaaaagcccctcgaa	Protospacer
 ******* ************.****  **

134. spacer 1.2|230890|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to MN693834 (Marine virus AFVG_250M755, complete genome) position: , mismatch: 5, identity: 0.833

aaaggagtataacatggaaaatccaattac	CRISPR spacer
ttaggagtataacatggcaaatccaagcac	Protospacer
  *************** ******** .**

135. spacer 1.2|230890|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to MN694396 (Marine virus AFVG_250M754, complete genome) position: , mismatch: 5, identity: 0.833

aaaggagtataacatggaaaatccaattac	CRISPR spacer
ttaggagtataacatggcaaatccaagcac	Protospacer
  *************** ******** .**

136. spacer 1.2|230890|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to MN694618 (Marine virus AFVG_250M753, complete genome) position: , mismatch: 5, identity: 0.833

aaaggagtataacatggaaaatccaattac	CRISPR spacer
ttaggagtataacatggcaaatccaagcac	Protospacer
  *************** ******** .**

137. spacer 1.5|231088|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019362 (Borrelia turicatae 91E135 isolate Oz1 plasmid cp31, complete sequence) position: , mismatch: 5, identity: 0.833

taatatttttactaaagt-gttaaatacaaa	CRISPR spacer
caatatttttactaaagtggttaattactt-	Protospacer
.***************** ***** ***

138. spacer 1.9|231352|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018188 (Streptococcus salivarius strain ICDC2 plasmid, complete sequence) position: , mismatch: 5, identity: 0.833

tcccaaatttgtaactcccaaggatagtag	CRISPR spacer
tcccagatttgtaattcccaaggataagaa	Protospacer
*****.********.***********. *.

139. spacer 1.15|231747|30|NZ_ALUF01000027|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP011513 (Paenibacillus peoriae strain HS311 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.833

ttccttaaaaacaaaaacagcacccacatt-	CRISPR spacer
ttccttaaaaacaagaacaacacgc-cgttg	Protospacer
**************.****.*** * *.**

140. spacer 1.19|232011|30|NZ_ALUF01000027|CRISPRCasFinder,CRT matches to NZ_CP013615 (Clostridium perfringens strain JP838 plasmid pJFP838A, complete sequence) position: , mismatch: 5, identity: 0.833

tttttctattttatttatttc-aatagcatc	CRISPR spacer
tttttctaatttatttatttcaaataagaa-	Protospacer
******** ************ ****. *

141. spacer 1.19|232011|30|NZ_ALUF01000027|CRISPRCasFinder,CRT matches to NZ_CP012498 (Escherichia coli strain 06-00048 plasmid pCFSAN004178P_02, complete sequence) position: , mismatch: 5, identity: 0.833

tttttctattttatttatttcaatagcatc-	CRISPR spacer
tttttctattttatctatttc-atactttcc	Protospacer
**************.****** *** . **

142. spacer 1.19|232011|30|NZ_ALUF01000027|CRISPRCasFinder,CRT matches to NZ_CP042296 (Escherichia coli strain RM9088 plasmid p1RM9088, complete sequence) position: , mismatch: 5, identity: 0.833

tttttctattttatttatttcaatagcatc-	CRISPR spacer
tttttctattttatctatttc-atactttcc	Protospacer
**************.****** *** . **

143. spacer 1.19|232011|30|NZ_ALUF01000027|CRISPRCasFinder,CRT matches to NZ_CP014570 (Campylobacter fetus subsp. venerealis strain 01/165 plasmid mp2, complete sequence) position: , mismatch: 5, identity: 0.833

tttttctattttatttatttcaata-gcatc	CRISPR spacer
tggatctattttatttattgcaatatgcat-	Protospacer
*   *************** ***** ****

144. spacer 1.1|230824|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023514 (Enterococcus sp. FDAARGOS_375 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.8

tttttttgaatatataaaaagtcc-ctgcaa	CRISPR spacer
cttttttgaatatattaaaaatccgataca-	Protospacer
.************** ****.***  *.**

145. spacer 1.1|230824|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to JQ797329 (Listeria phage vB_LmoM_AG20, complete genome) position: , mismatch: 6, identity: 0.8

tttttttgaatatataaaaag---tccctgcaa	CRISPR spacer
tttttttaaatatataaaaagaactccttt---	Protospacer
*******.*************   ***.*

146. spacer 1.5|231088|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to KT895374 (Bacillus phage vB_BpuM-BpSp, complete genome) position: , mismatch: 6, identity: 0.8

taatatttttactaaagtgttaaatacaaa	CRISPR spacer
taatatttttactaaagagataaatgagta	Protospacer
***************** * *****. . *

147. spacer 1.11|231483|30|NZ_ALUF01000027|CRISPRCasFinder,CRT,PILER-CR matches to AP014200 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C74-MedDCM-OCT-S33-C73, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 6, identity: 0.8

tttgatagtggtgtggttgttatcaggcat	CRISPR spacer
tttaatagtggtggggttgttatcaaacca	Protospacer
***.********* ***********..*

148. spacer 1.14|231681|30|NZ_ALUF01000027|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR215032 (Mycoplasma gallopavonis strain NCTC10186 plasmid 2) position: , mismatch: 6, identity: 0.8

ttatcatgatgaggaacaatcaattgatca	CRISPR spacer
ttttattgatgcggaacattcaattgatcc	Protospacer
** *  ***** ****** **********

149. spacer 1.14|231681|30|NZ_ALUF01000027|CRISPRCasFinder,CRT,PILER-CR matches to NC_015221 (Nitrosomonas sp. AL212 plasmid pNAL21202, complete sequence) position: , mismatch: 6, identity: 0.8

ttatcatgatgaggaacaatcaattgatca	CRISPR spacer
ttatcacgataaggaacaatcaaatattga	Protospacer
******.***.************ *. * *

150. spacer 1.15|231747|30|NZ_ALUF01000027|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP053953 (Bacillus cereus strain FDAARGOS_798 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.8

ttccttaaaaacaaaaacagcacccacatt	CRISPR spacer
ctccttaaaaacaaaaacagaccccttata	Protospacer
.*******************  *** .**

151. spacer 1.15|231747|30|NZ_ALUF01000027|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP053950 (Bacillus cereus strain FDAARGOS_799 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.8

ttccttaaaaacaaaaacagcacccacatt	CRISPR spacer
ctccttaaaaacaaaaacagaccccttata	Protospacer
.*******************  *** .**

152. spacer 1.18|231945|30|NZ_ALUF01000027|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009639 (Bacillus cereus 03BB108 plasmid pBFI_1, complete sequence) position: , mismatch: 6, identity: 0.8

agctattgctcaaaaaagagtaacagctca	CRISPR spacer
acctattgctcaaaaaaaagtaaaagaaaa	Protospacer
* ***************.***** **   *

153. spacer 1.18|231945|30|NZ_ALUF01000027|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP053963 (Bacillus cereus strain FDAARGOS_802 plasmid unnamed3, complete sequence) position: , mismatch: 6, identity: 0.8

agctattgctcaaaaaagagtaacagctca	CRISPR spacer
acctattgctcaaaaaaaagtaaaagaaaa	Protospacer
* ***************.***** **   *

154. spacer 1.18|231945|30|NZ_ALUF01000027|CRISPRCasFinder,CRT,PILER-CR matches to MN693532 (Marine virus AFVG_25M340, complete genome) position: , mismatch: 6, identity: 0.8

agctattgctcaaaaaagagtaacagctca	CRISPR spacer
agcaactgctcaaaaaagagtaagtcgtca	Protospacer
*** *.*****************    ***

155. spacer 1.19|232011|30|NZ_ALUF01000027|CRISPRCasFinder,CRT matches to NZ_CP013615 (Clostridium perfringens strain JP838 plasmid pJFP838A, complete sequence) position: , mismatch: 6, identity: 0.8

tttttctattttatttatttcaatagcatc	CRISPR spacer
tttttttattttatatatttcaatacaaca	Protospacer
*****.******** **********  *.

156. spacer 1.19|232011|30|NZ_ALUF01000027|CRISPRCasFinder,CRT matches to NZ_KX086582 (Staphylococcus aureus strain WBG1024 plasmid pWBG637, complete sequence) position: , mismatch: 6, identity: 0.8

tttttctattttatttatttcaatagcatc	CRISPR spacer
attttatattttatatatttcaatcacaac	Protospacer
 **** ******** ********* .** *

157. spacer 1.19|232011|30|NZ_ALUF01000027|CRISPRCasFinder,CRT matches to NZ_MH587575 (Staphylococcus aureus strain WBG4880 plasmid pWBG637, complete sequence) position: , mismatch: 6, identity: 0.8

tttttctattttatttatttcaatagcatc	CRISPR spacer
attttatattttatatatttcaatcacaac	Protospacer
 **** ******** ********* .** *

158. spacer 1.21|232143|30|NZ_ALUF01000027|CRISPRCasFinder,CRT,PILER-CR matches to NC_016748 (Marinitoga piezophila KA3 plasmid pMARPI01, complete sequence) position: , mismatch: 6, identity: 0.8

aaaacaattgaagagctggagaattacact----	CRISPR spacer
aagagaattgaagagctggagaa----actagta	Protospacer
**.* ******************    ***

159. spacer 1.21|232143|30|NZ_ALUF01000027|CRISPRCasFinder,CRT,PILER-CR matches to MN693238 (Marine virus AFVG_25M402, complete genome) position: , mismatch: 6, identity: 0.8

aaaacaattgaagagctggagaattacact	CRISPR spacer
aaaacaactgaagagctggaggaagaggct	Protospacer
*******.*************.*  * .**

160. spacer 1.22|232209|30|NZ_ALUF01000027|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020434 (Bacillus sp. FDAARGOS_235 plasmid 1, complete sequence) position: , mismatch: 6, identity: 0.8

ttggaaaaaacacgaaagtgatattacttt	CRISPR spacer
ttggaaaaaacatgaaagtgatcgtgaatt	Protospacer
************.*********  *.  **

161. spacer 1.1|230824|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024414 (Lactobacillus plantarum strain ATCC 8014 plasmid pLP49, complete sequence) position: , mismatch: 7, identity: 0.767

tttttttgaatatataaaaagtccctgcaa	CRISPR spacer
tttttttgaatatataaaaagcacaaaaac	Protospacer
*********************. *  . *

162. spacer 1.1|230824|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to NC_011101 (Lactobacillus plantarum plasmid pLTK13, complete sequence) position: , mismatch: 7, identity: 0.767

tttttttgaatatataaaaagtccctgcaa	CRISPR spacer
tttttttgaatatataaaaagcacaaaaac	Protospacer
*********************. *  . *

163. spacer 1.1|230824|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030883 (Lactobacillus plantarum strain nF1 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.767

tttttttgaatatataaaaagtccctgcaa	CRISPR spacer
tttttttgaatctataaaaagtacaaaaac	Protospacer
*********** ********** *  . *

164. spacer 1.1|230824|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025283 (Lactobacillus plantarum subsp. plantarum strain nF1-FD plasmid pnF1FD02, complete sequence) position: , mismatch: 7, identity: 0.767

tttttttgaatatataaaaagtccctgcaa	CRISPR spacer
tttttttgaatctataaaaagtacaaaaac	Protospacer
*********** ********** *  . *

165. spacer 1.1|230824|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KU513859 (Listeria monocytogenes strain IZSAM_Lm_15_17439_A144 plasmid pLmA144, complete sequence) position: , mismatch: 7, identity: 0.767

tttttttgaatatataaaaagtc-cctgcaa	CRISPR spacer
tttttttcaatatataaatagtcatccgtg-	Protospacer
******* ********** **** .*.*..

166. spacer 1.1|230824|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030934 (Enterococcus gilvus strain CR1 plasmid pCR1B, complete sequence) position: , mismatch: 7, identity: 0.767

tttttttgaatatataaaaagtc-cctgcaa	CRISPR spacer
ttttttagaatatataaaaggtcatctatt-	Protospacer
****** ************.*** .**..

167. spacer 1.1|230824|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to MK134858 (Listeria monocytogenes plasmid pLM1686, complete sequence) position: , mismatch: 7, identity: 0.767

tttttttgaatatataaaaagtc-cctgcaa	CRISPR spacer
tttttttcaatatataaatagtcatccgtg-	Protospacer
******* ********** **** .*.*..

168. spacer 1.1|230824|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013725 (Listeria monocytogenes strain Lm N1546 plasmid pLmN1546, complete sequence) position: , mismatch: 7, identity: 0.767

tttttttgaatatataaaaagtc-cctgcaa	CRISPR spacer
tttttttcaatatataaatagtcatccgtg-	Protospacer
******* ********** **** .*.*..

169. spacer 1.1|230824|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to NZ_HG813248 (Listeria monocytogenes R479a plasmid pLMR479a, complete sequence) position: , mismatch: 7, identity: 0.767

tttttttgaatatataaaaagtc-cctgcaa	CRISPR spacer
tttttttcaatatataaatagtcatccgtg-	Protospacer
******* ********** **** .*.*..

170. spacer 1.2|230890|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to MT661596 (Proteus phage 10, complete genome) position: , mismatch: 7, identity: 0.767

aaaggagtataacatggaaaatccaattac	CRISPR spacer
ccaggagtatatcatggaaaatacattaat	Protospacer
  ********* ********** ** * *.

171. spacer 1.5|231088|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to CP009912 (Borreliella chilensis strain VA1 plasmid lp54, complete sequence) position: , mismatch: 7, identity: 0.767

taatatttttactaaagtgttaaatacaaa	CRISPR spacer
gactgattttaataaagttttaaatacaat	Protospacer
 * *. ***** ****** **********

172. spacer 1.5|231088|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to MT774407 (CrAssphage cr125_1, complete genome) position: , mismatch: 7, identity: 0.767

taatatttttactaaagtgttaaatacaaa	CRISPR spacer
ctacaatcttactaaagtattaaatacaat	Protospacer
. *.* *.**********.**********

173. spacer 1.5|231088|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to MT774404 (CrAssphage cr114_1, complete genome) position: , mismatch: 7, identity: 0.767

taatatttttactaaagtgttaaatacaaa	CRISPR spacer
ctacaatcttactaaagtattaaatacaat	Protospacer
. *.* *.**********.**********

174. spacer 1.16|231813|30|NZ_ALUF01000027|CRISPRCasFinder,CRT,PILER-CR matches to NC_021529 (Vibrio phage nt-1, complete genome) position: , mismatch: 7, identity: 0.767

tattatcaaaatattctttggcgaattcat	CRISPR spacer
cgatgtcaaaatgttcttttgcgaattcag	Protospacer
.. *.*******.****** *********

175. spacer 1.16|231813|30|NZ_ALUF01000027|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015644 (Staphylococcus simulans strain MR1 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.767

tattatcaaaatattctttggcgaattcat	CRISPR spacer
aatcatcaaaatattctttggcataatttt	Protospacer
 **.******************. * *. *

176. spacer 1.16|231813|30|NZ_ALUF01000027|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017431 (Staphylococcus simulans strain MR4 plasmid unnamed4, complete sequence) position: , mismatch: 7, identity: 0.767

tattatcaaaatattctttggcgaattcat	CRISPR spacer
aatcatcaaaatattctttggcataatttt	Protospacer
 **.******************. * *. *

177. spacer 1.16|231813|30|NZ_ALUF01000027|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017429 (Staphylococcus simulans strain MR3 plasmid unnamed5, complete sequence) position: , mismatch: 7, identity: 0.767

tattatcaaaatattctttggcgaattcat	CRISPR spacer
aatcatcaaaatattctttggcataatttt	Protospacer
 **.******************. * *. *

178. spacer 1.16|231813|30|NZ_ALUF01000027|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016158 (Staphylococcus simulans strain MR2 plasmid unnamed1) position: , mismatch: 7, identity: 0.767

tattatcaaaatattctttggcgaattcat	CRISPR spacer
aatcatcaaaatattctttggcataatttt	Protospacer
 **.******************. * *. *

179. spacer 1.19|232011|30|NZ_ALUF01000027|CRISPRCasFinder,CRT matches to NZ_CP015331 (Borrelia hermsii HS1 isolate Browne Mountain plasmid lpN31, complete sequence) position: , mismatch: 7, identity: 0.767

tttttctattttatttatttcaatagcatc	CRISPR spacer
aagttctattttattaatttcaatagctct	Protospacer
   ************ *********** ..

180. spacer 1.19|232011|30|NZ_ALUF01000027|CRISPRCasFinder,CRT matches to KR131710 (Fusobacterium phage Funu1, complete genome) position: , mismatch: 7, identity: 0.767

tttttctattttatttatttcaatagcatc	CRISPR spacer
aaattccattttatttttttcaatagcagg	Protospacer
   ***.********* ***********

181. spacer 1.19|232011|30|NZ_ALUF01000027|CRISPRCasFinder,CRT matches to NC_015716 (Zymomonas mobilis subsp. pomaceae ATCC 29192 plasmid pZYMOP02, complete sequence) position: , mismatch: 7, identity: 0.767

tttttctattttatttatttcaatagcatc	CRISPR spacer
atcatcttttttatttatttcaataccaat	Protospacer
 *. *** ***************** ** .

182. spacer 1.19|232011|30|NZ_ALUF01000027|CRISPRCasFinder,CRT matches to NZ_AP019552 (Athalassotoga saccharophila strain NAS-01 plasmid pATS1, complete sequence) position: , mismatch: 7, identity: 0.767

tttttctattttatttatttcaatagcatc	CRISPR spacer
tttttctattttctttatttcattcgagag	Protospacer
************ ********* * * .

183. spacer 1.19|232011|30|NZ_ALUF01000027|CRISPRCasFinder,CRT matches to NZ_CP029455 (Bacillus cereus strain FORC087 plasmid pFORC087.1, complete sequence) position: , mismatch: 7, identity: 0.767

tttttctattttatttatttcaatagcatc	CRISPR spacer
tttttctattttattaattgcaaccttatt	Protospacer
*************** *** ***.  .**.

184. spacer 1.19|232011|30|NZ_ALUF01000027|CRISPRCasFinder,CRT matches to NC_010418 (Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence) position: , mismatch: 7, identity: 0.767

tttttctattttatttatttcaatagcatc	CRISPR spacer
tttttctattttatttattaaaatcatttg	Protospacer
*******************  *** .. *

185. spacer 1.19|232011|30|NZ_ALUF01000027|CRISPRCasFinder,CRT matches to NC_002137 (Lactococcus lactis cremoris NIZO B40 plasmid pNZ4000, complete sequence) position: , mismatch: 7, identity: 0.767

tttttctattttatttatttcaatagcatc	CRISPR spacer
attatctattttatttattttaatattaat	Protospacer
 ** ****************.**** .* .

186. spacer 1.19|232011|30|NZ_ALUF01000027|CRISPRCasFinder,CRT matches to NZ_CP041739 (Enterococcus faecalis EnGen0107 strain B594 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.767

tttttctattttatttatttcaatagcatc	CRISPR spacer
actttcttttttatttattacaataataac	Protospacer
 .***** *********** *****..* *

187. spacer 1.19|232011|30|NZ_ALUF01000027|CRISPRCasFinder,CRT matches to NZ_CP040940 (Cetia pacifica strain TB6 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

tttttctattttatttatttcaatagcatc	CRISPR spacer
tttttctactttatttatttcttgtgcttt	Protospacer
********.************    ** *.

188. spacer 1.19|232011|30|NZ_ALUF01000027|CRISPRCasFinder,CRT matches to NZ_CP013715 (Staphylococcus equorum strain C2014 plasmid pC2014-1, complete sequence) position: , mismatch: 7, identity: 0.767

tttttctattttatttatttcaatagcatc	CRISPR spacer
catttctatattatttatttccataaattc	Protospacer
. ******* *********** ***.  **

189. spacer 1.19|232011|30|NZ_ALUF01000027|CRISPRCasFinder,CRT matches to NZ_AP014867 (Bacillus thuringiensis serovar tolworthi strain Pasteur Institute Standard strain plasmid pKK3, complete sequence) position: , mismatch: 7, identity: 0.767

tttttctattttatttatttcaatagcatc	CRISPR spacer
aatttctattttatatctttcaataagatt	Protospacer
  ************ * ********. **.

190. spacer 1.19|232011|30|NZ_ALUF01000027|CRISPRCasFinder,CRT matches to NZ_CP030046 (Enterococcus faecalis strain C54 plasmid pC54, complete sequence) position: , mismatch: 7, identity: 0.767

tttttctattttatttatttcaatagcatc	CRISPR spacer
actttcttttttatttattacaataataac	Protospacer
 .***** *********** *****..* *

191. spacer 1.19|232011|30|NZ_ALUF01000027|CRISPRCasFinder,CRT matches to NC_021158 (Psychrobacter maritimus plasmid pKLH80, strain MR29-12, complete sequence) position: , mismatch: 7, identity: 0.767

tttttctattttatttatttcaatagcatc	CRISPR spacer
ttcacatattttatttaattcaatatcatt	Protospacer
**. . *********** ******* ***.

192. spacer 1.19|232011|30|NZ_ALUF01000027|CRISPRCasFinder,CRT matches to NZ_CP040501 (Lactobacillus paragasseri JV-V03 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

tttttctattttatttatttcaatagcatc	CRISPR spacer
ctcctgtattttatttagttcaaaagcatt	Protospacer
.*..* *********** ***** *****.

193. spacer 1.19|232011|30|NZ_ALUF01000027|CRISPRCasFinder,CRT matches to NZ_CP030043 (Enterococcus faecalis strain C25 plasmid pC25-1, complete sequence) position: , mismatch: 7, identity: 0.767

tttttctattttatttatttcaatagcatc	CRISPR spacer
actttcttttttatttattacaataataac	Protospacer
 .***** *********** *****..* *

194. spacer 1.20|232077|30|NZ_ALUF01000027|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP053978 (Bacillus thuringiensis strain FDAARGOS_795 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.767

caggagatctataacactgagttcattcta	CRISPR spacer
caggagatctataatacttagttatatcag	Protospacer
**************.*** ****   ** .

195. spacer 1.20|232077|30|NZ_ALUF01000027|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009333 (Bacillus thuringiensis strain HD1011 plasmid 4, complete sequence) position: , mismatch: 7, identity: 0.767

caggagatctataacactgagttcattcta	CRISPR spacer
caggagatctataatacttagttatatcag	Protospacer
**************.*** ****   ** .

196. spacer 1.21|232143|30|NZ_ALUF01000027|CRISPRCasFinder,CRT,PILER-CR matches to MT074464 (Salmonella phage bobsandoy, complete genome) position: , mismatch: 7, identity: 0.767

aaaacaattgaagagctggag--aattacact	CRISPR spacer
aaaacaattgaaaagctggagctgactaag--	Protospacer
************.********  .*.** .

197. spacer 1.1|230824|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015355 (Bacillus thuringiensis strain MYBT18246 plasmid p109822, complete sequence) position: , mismatch: 8, identity: 0.733

tttttttgaatatataaaaagtccctgcaa	CRISPR spacer
attttttgactatctaaaaagtcctatgga	Protospacer
 ******** *** **********.   .*

198. spacer 1.2|230890|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to NC_015911 (Borreliella bissettii DN127 plasmid cp9, complete sequence) position: , mismatch: 8, identity: 0.733

aaaggagtataacatggaaaatccaattac	CRISPR spacer
caaggagtataacatggcaaatatttcaac	Protospacer
 **************** **** .  . **

199. spacer 1.4|231022|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to MK733259 (Yersinia phage YeP1, complete genome) position: , mismatch: 8, identity: 0.733

aatggtggctaacatcagtgacgaatcgtt	CRISPR spacer
aatggtggctaacatcagcgccgagcttgc	Protospacer
******************.* ***...  .

200. spacer 1.4|231022|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to MK733261 (Yersinia phage YeP3, complete genome) position: , mismatch: 8, identity: 0.733

aatggtggctaacatcagtgacgaatcgtt	CRISPR spacer
aatggtggctaacatcagcgccgagcttgc	Protospacer
******************.* ***...  .

201. spacer 1.4|231022|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to MK733260 (Yersinia phage YeP2, complete genome) position: , mismatch: 8, identity: 0.733

aatggtggctaacatcagtgacgaatcgtt	CRISPR spacer
aatggtggctaacatcagcgccgagcttgc	Protospacer
******************.* ***...  .

202. spacer 1.4|231022|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026760 (Klebsiella aerogenes strain AR_0062 plasmid unnamed4) position: , mismatch: 8, identity: 0.733

aatggtggctaacatcagtgacgaatcgtt	CRISPR spacer
cactatggctaacattagtgacgaattggc	Protospacer
 *. .**********.**********.* .

203. spacer 1.4|231022|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026760 (Klebsiella aerogenes strain AR_0062 plasmid unnamed4) position: , mismatch: 8, identity: 0.733

aatggtggctaacatcagtgacgaatcgtt	CRISPR spacer
cactatggctaacattagtgacgaattggc	Protospacer
 *. .**********.**********.* .

204. spacer 1.4|231022|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014747 (Klebsiella aerogenes strain FDAARGOS_139 plasmid unnamed) position: , mismatch: 8, identity: 0.733

aatggtggctaacatcagtgacgaatcgtt	CRISPR spacer
cactatggctaacattagtgacgaattggc	Protospacer
 *. .**********.**********.* .

205. spacer 1.4|231022|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014747 (Klebsiella aerogenes strain FDAARGOS_139 plasmid unnamed) position: , mismatch: 8, identity: 0.733

aatggtggctaacatcagtgacgaatcgtt	CRISPR spacer
cactatggctaacattagtgacgaattggc	Protospacer
 *. .**********.**********.* .

206. spacer 1.4|231022|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014747 (Klebsiella aerogenes strain FDAARGOS_139 plasmid unnamed) position: , mismatch: 8, identity: 0.733

aatggtggctaacatcagtgacgaatcgtt	CRISPR spacer
cactatggctaacattagtgacgaattggc	Protospacer
 *. .**********.**********.* .

207. spacer 1.5|231088|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to MF547662 (Clostridioides phage LIBA6276, complete genome) position: , mismatch: 8, identity: 0.733

taatatttttactaaagtgttaaatacaaa	CRISPR spacer
taatacttttactaaattgttaattgattt	Protospacer
*****.********** ****** *.

208. spacer 1.5|231088|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to MF547663 (Clostridioides phage LIBA2945, complete genome) position: , mismatch: 8, identity: 0.733

taatatttttactaaagtgttaaatacaaa	CRISPR spacer
taatacttttactaaattgttaattgattt	Protospacer
*****.********** ****** *.

209. spacer 1.9|231352|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to NC_019691 (Synechococcus sp. PCC 7502 plasmid pSYN7502.01, complete sequence) position: , mismatch: 8, identity: 0.733

tcccaaatttgtaactcccaaggatagtag	CRISPR spacer
tcccaaatgtggaactcccaaggctgactt	Protospacer
******** ** *********** *...

210. spacer 1.11|231483|30|NZ_ALUF01000027|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR214939 (Mycoplasma salivarium strain NCTC10113 plasmid 2) position: , mismatch: 8, identity: 0.733

tttgatagtggtgtggttgttatcaggcat	CRISPR spacer
tttgatggtggtgtggttgctattattgga	Protospacer
******.************.***.*   .

211. spacer 1.15|231747|30|NZ_ALUF01000027|CRISPRCasFinder,CRT,PILER-CR matches to AP014693 (Ralstonia phage RSL2 DNA, complete sequence) position: , mismatch: 8, identity: 0.733

ttccttaaaaacaaaaacagcacccacatt	CRISPR spacer
ggatcgaaaaacaaaaacagaacccatatt	Protospacer
   .. ************** *****.***

212. spacer 1.19|232011|30|NZ_ALUF01000027|CRISPRCasFinder,CRT matches to MN693026 (Marine virus AFVG_117M72, complete genome) position: , mismatch: 8, identity: 0.733

tttttctattttatttatttcaatagcatc	CRISPR spacer
attttctattttatttctttcaaataattg	Protospacer
 *************** ******  .  *

213. spacer 1.19|232011|30|NZ_ALUF01000027|CRISPRCasFinder,CRT matches to MN693034 (Marine virus AFVG_117M74, complete genome) position: , mismatch: 8, identity: 0.733

tttttctattttatttatttcaatagcatc	CRISPR spacer
attttctattttatttttttcaaataattg	Protospacer
 *************** ******  .  *

214. spacer 1.19|232011|30|NZ_ALUF01000027|CRISPRCasFinder,CRT matches to NC_016748 (Marinitoga piezophila KA3 plasmid pMARPI01, complete sequence) position: , mismatch: 8, identity: 0.733

tttttctattttatttatttcaatagcatc	CRISPR spacer
attttctatttttgttatttcaatttggtg	Protospacer
 ***********  **********   .*

215. spacer 1.19|232011|30|NZ_ALUF01000027|CRISPRCasFinder,CRT matches to NZ_MF547664 (Clostridioides difficile strain LIBA-6289 plasmid LIBA6289, complete sequence) position: , mismatch: 8, identity: 0.733

tttttctattttatttatttcaatagcatc	CRISPR spacer
agaatctattttttttacttcaatagcttt	Protospacer
    ******** ****.********* *.

216. spacer 1.19|232011|30|NZ_ALUF01000027|CRISPRCasFinder,CRT matches to MH572383 (Microviridae sp. isolate SD_SF_24, complete genome) position: , mismatch: 8, identity: 0.733

tttttctattttatttatttcaatagcatc	CRISPR spacer
ctgcttaattttattaatttcaatagcaag	Protospacer
.* .*. ******** ************

217. spacer 1.19|232011|30|NZ_ALUF01000027|CRISPRCasFinder,CRT matches to MN693588 (Marine virus AFVG_25M366, complete genome) position: , mismatch: 8, identity: 0.733

tttttctattttatttatttcaatagcatc	CRISPR spacer
tgtttctattttatttatttgaaagttttg	Protospacer
* ****************** ** . . *

218. spacer 1.6|231154|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015630 (Borrelia turicatae strain BTE5EL plasmid lp159) position: , mismatch: 9, identity: 0.7

aggcaatataagagatattagagaaagctt	CRISPR spacer
ttagtatataagagatataagagaaaatct	Protospacer
  .  ************* *******...*

219. spacer 1.8|231286|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to NC_019782 (Lactobacillus phage AQ113, complete genome) position: , mismatch: 9, identity: 0.7

cctgaaattggctgatatttttgatgagtt	CRISPR spacer
gaagaaattagctgatttttttgatgtacc	Protospacer
   ******.****** ********* ...

220. spacer 1.16|231813|30|NZ_ALUF01000027|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP037949 (Erwinia sp. QL-Z3 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

tattatcaaaatattctttggcgaattcat	CRISPR spacer
aaggatcaaaaaattctttggcgaagagga	Protospacer
 *  ******* *************   .

221. spacer 1.16|231813|30|NZ_ALUF01000027|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MG973074 (Clostridioides difficile strain HSJD-312 plasmid pHSJD-312, complete sequence) position: , mismatch: 9, identity: 0.7

tattatcaaaatattctttggcgaattcat	CRISPR spacer
ataaattaaaatattctttggcaaattgtc	Protospacer
    **.***************.****  .

222. spacer 1.19|232011|30|NZ_ALUF01000027|CRISPRCasFinder,CRT matches to NC_021623 (Borrelia hermsii strain HS1 plasmid lp174, complete sequence) position: , mismatch: 9, identity: 0.7

tttttctattttatttatttcaatagcatc	CRISPR spacer
acttactattttatttatttctatacttaa	Protospacer
 .** **************** *** .

223. spacer 1.19|232011|30|NZ_ALUF01000027|CRISPRCasFinder,CRT matches to NZ_CP014350 (Borrelia hermsii HS1 isolate Browne Mountain plasmid megaplasmid, complete sequence) position: , mismatch: 9, identity: 0.7

tttttctattttatttatttcaatagcatc	CRISPR spacer
acttactattttatttatttctatacttaa	Protospacer
 .** **************** *** .

224. spacer 1.20|232077|30|NZ_ALUF01000027|CRISPRCasFinder,CRT,PILER-CR matches to LT960608 (Bacillus phage SBSphiJ genome assembly, complete genome: monopartite) position: , mismatch: 9, identity: 0.7

caggagatctataacactgagttcattcta	CRISPR spacer
acagaaatctataacaatgagttcatgagt	Protospacer
  .**.********** *********

225. spacer 1.1|230824|30|NZ_ALUF01000027|PILER-CR,CRISPRCasFinder,CRT matches to KX228400 (Clostridium phage CDKM15, complete genome) position: , mismatch: 10, identity: 0.667

tttttttgaatatataaaaagtccctgcaa	CRISPR spacer
tttttttgaatatatcaaaagctttatttc	Protospacer
*************** *****....  .

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage