CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_ALTM01000003	Streptococcus agalactiae GB00548 ctg7180000003457, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALTM01000005	Streptococcus agalactiae GB00548 ctg7180000003459, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALTM01000004	Streptococcus agalactiae GB00548 ctg7180000003458, whole genome shotgun sequence	0 crisprs	DEDDh	0	0	0	0
NZ_ALTM01000011	Streptococcus agalactiae GB00548 ctg7180000003465, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALTM01000009	Streptococcus agalactiae GB00548 ctg7180000003463, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALTM01000001	Streptococcus agalactiae GB00548 ctg7180000003455, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALTM01000006	Streptococcus agalactiae GB00548 ctg7180000003460, whole genome shotgun sequence	0 crisprs	DinG	0	0	1	0
NZ_ALTM01000016	Streptococcus agalactiae GB00548 ctg7180000003470, whole genome shotgun sequence	2 crisprs	cas9,cas1,cas2,csn2,csm6	1	7	2	0
NZ_ALTM01000014	Streptococcus agalactiae GB00548 ctg7180000003468, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALTM01000015	Streptococcus agalactiae GB00548 ctg7180000003469, whole genome shotgun sequence	0 crisprs	DEDDh	0	0	2	0
NZ_ALTM01000007	Streptococcus agalactiae GB00548 ctg7180000003461, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALTM01000012	Streptococcus agalactiae GB00548 ctg7180000003466, whole genome shotgun sequence	0 crisprs	cas3	0	0	0	0
NZ_ALTM01000008	Streptococcus agalactiae GB00548 ctg7180000003462, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_ALTM01000010	Streptococcus agalactiae GB00548 ctg7180000003464, whole genome shotgun sequence	0 crisprs	csa3,cas3	0	0	1	0
NZ_ALTM01000013	Streptococcus agalactiae GB00548 ctg7180000003467, whole genome shotgun sequence	0 crisprs	NA	0	0	1	0
NZ_ALTM01000002	Streptococcus agalactiae GB00548 ctg7180000003456, whole genome shotgun sequence	0 crisprs	NA	0	0	0	1

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

45267 : 55539

Streptococcus_phage(57.14%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000638889.1\|45267_46413_-	cysteine desulfurase	A0A1X6WFP1	Pacmanvirus	4.3e-29	28.7
WP_000033715.1\|46659_47112_+	hypothetical protein	NA	NA	NA	NA
WP_000043881.1\|47154_48504_-	glutathione-disulfide reductase	A0A2K5B2C5	Erysipelothrix_phage	2.2e-32	25.5
WP_000024620.1\|48678_49014_-	YlbF/YmcA family competence regulator	A0A1X9I5Y8	Streptococcus_phage	8.9e-20	39.4
WP_001269901.1\|49097_50264_-	chorismate synthase	A0A291AU41	Pandoravirus	9.3e-40	34.1
WP_001195736.1\|50264_51332_-	3-dehydroquinate synthase	NA	NA	NA	NA
WP_000707048.1\|51425_52103_-	type I 3-dehydroquinate dehydratase	W6LP76	Streptococcus_phage	5.3e-88	68.4
WP_001037596.1\|52102_53260_-	class I SAM-dependent rRNA methyltransferase	W6LLI2	Streptococcus_phage	1.3e-139	66.0
WP_000721268.1\|53394_55539_+	LTA synthase family protein	W6LM83	Streptococcus_phage	6.3e-260	67.5

DBSCAN-SWA_2

231322 : 242055

Streptococcus_phage(84.62%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000767486.1\|231322_232150_+	exodeoxyribonuclease III	M1PSC0	Streptococcus_phage	1.1e-124	78.0
WP_000287943.1\|232190_232547_-	arsenate reductase family protein	M1PLC0	Streptococcus_phage	5.2e-42	72.6
WP_000966769.1\|232548_233025_-	methylated-DNA--[protein]-cysteine S-methyltransferase	M1PFU9	Streptococcus_phage	1.6e-38	50.9
WP_000232154.1\|233080_234262_-	phosphoglycerate dehydrogenase	M1NSB9	Streptococcus_phage	9.1e-168	75.3
WP_001198082.1\|234323_234872_-	GNAT family acetyltransferase	M1PSC3	Streptococcus_phage	1.4e-54	57.9
WP_000158397.1\|234940_236032_-	3-phosphoserine/phosphohydroxythreonine transaminase	M1Q1P2	Streptococcus_phage	3.9e-165	78.0
WP_000603271.1\|236164_236800_+	copper homeostasis protein CutC	NA	NA	NA	NA
WP_001868293.1\|236843_236948_-	hypothetical protein	NA	NA	NA	NA
WP_079254671.1\|236932_237094_+	hypothetical protein	NA	NA	NA	NA
WP_001867099.1\|237069_237933_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	M1PLC5	Streptococcus_phage	3.1e-109	70.4
WP_000358198.1\|237938_238265_-	DNA replication initiation control protein YabA	M1PFV3	Streptococcus_phage	3.2e-30	61.1
WP_000364568.1\|238295_239159_-	DNA polymerase III subunit delta'	M1NSC1	Streptococcus_phage	2.5e-74	50.0
WP_000715592.1\|239178_239814_-	dTMP kinase	M1PSC7	Streptococcus_phage	2.8e-67	61.1
WP_001144242.1\|239902_240562_-	CBS domain-containing protein	M1NSC5	Streptococcus_phage	8.0e-65	56.5
WP_000178150.1\|240580_241291_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.2e-13	29.1
WP_001185979.1\|241290_242055_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	4.4e-14	24.3

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_ALTM01000016

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_ALTM01000016_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_ALTM01000016_1

263482-264048

TypeII

II-A

Consensus_repeat	Method
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	PILER-CR
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	CRISPRCasFinder
GTTTTAGAGCTGTGNTGTTTCGAATGGTTCCAAAAC	CRT

8 spacers

csn2,cas2,cas1,cas9

The CRISPR arrays of NZ_ALTM01000016_1

>merge|NZ_ALTM01000016|1|263482-264048|PILER-CR,CRISPRCasFinder,CRT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACGAATTAAAAAGAAAGTTATCGCGACTAAAAGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACGATAGAATTGTTACTTTGGAAGGGGAACTTGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACAACAACTTTCTTACAAAAGGTTCTAGTTTTCTTGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACGCTGGAGATTTTACAAGCAGTTTGAATTTCGTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAACTTTAAAGAGATATCTGTTTCATCTTGCGGAGTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAACACGCTCTGAGGCAGATGAGGAACAGGCGCAGTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAACAGTTTCTTGTGGGTTAGCTTGTCCACCGTAGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACGAACATGAAAGATTTTAAAAAAGAACATTTGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC

>NZ_ALTM01000016|1|1|263482-264048|PILER-CR
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	GAATTAAAAAGAAAGTTATCGCGACTAAAA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	GATAGAATTGTTACTTTGGAAGGGGAACTT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	AACAACTTTCTTACAAAAGGTTCTAGTTTTCTT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	GCTGGAGATTTTACAAGCAGTTTGAATTTC
GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC	TTTAAAGAGATATCTGTTTCATCTTGCGGA
GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC	ACGCTCTGAGGCAGATGAGGAACAGGCGCA
GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC	AGTTTCTTGTGGGTTAGCTTGTCCACCGTA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	GAACATGAAAGATTTTAAAAAAGAACATTT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC

>NZ_ALTM01000016|1|1|263482-264048|CRISPRCasFinder
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	GAATTAAAAAGAAAGTTATCGCGACTAAAA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	GATAGAATTGTTACTTTGGAAGGGGAACTT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	AACAACTTTCTTACAAAAGGTTCTAGTTTTCTT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	GCTGGAGATTTTACAAGCAGTTTGAATTTC
GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC	TTTAAAGAGATATCTGTTTCATCTTGCGGA
GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC	ACGCTCTGAGGCAGATGAGGAACAGGCGCA
GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC	AGTTTCTTGTGGGTTAGCTTGTCCACCGTA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	GAACATGAAAGATTTTAAAAAAGAACATTT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC

>NZ_ALTM01000016|1|1|263482-264048|CRT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	GAATTAAAAAGAAAGTTATCGCGACTAAAA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	GATAGAATTGTTACTTTGGAAGGGGAACTT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	AACAACTTTCTTACAAAAGGTTCTAGTTTTCTT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	GCTGGAGATTTTACAAGCAGTTTGAATTTC
GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC	TTTAAAGAGATATCTGTTTCATCTTGCGGA
GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC	ACGCTCTGAGGCAGATGAGGAACAGGCGCA
GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC	AGTTTCTTGTGGGTTAGCTTGTCCACCGTA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	GAACATGAAAGATTTTAAAAAAGAACATTT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_ALTM01000016.1\|WP_000929490.1\|261521_262391_+\|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|274694
NZ_ALTM01000016.1\|WP_000438313.1\|264670_265087_+\|nucleoside-diphosphate-kinase	unknown	unknown	gnl\|CDD\|179085
NZ_ALTM01000016.1\|WP_000065320.1\|274543_275647_+\|DUF2974-domain-containing-protein	unknown	unknown	gnl\|CDD\|371412
NZ_ALTM01000016.1\|WP_000159235.1\|252840_253212_+\|YbgA-family-protein	unknown	unknown	gnl\|CDD\|377982
NZ_ALTM01000016.1\|WP_000180008.1\|270033_270693_+\|HD-domain-containing-protein	unknown	unknown	gnl\|CDD\|224336
NZ_ALTM01000016.1\|WP_000122197.1\|262387_262729_+\|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226043
NZ_ALTM01000016.1\|WP_000914659.1\|253709_254840_+\|oxygen-independent-coproporphyrinogen-III-oxidase	unknown	unknown	gnl\|CDD\|236309
NZ_ALTM01000016.1\|WP_001040077.1\|257386_261520_+\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	COG3513_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226044
NZ_ALTM01000016.1\|WP_000665410.1\|271165_271600_+\|peptide-methionine-(R)-S-oxide-reductase-MsrB	unknown	unknown	gnl\|CDD\|234692
NZ_ALTM01000016.1\|WP_000168894.1\|271751_274544_+\|cation-transporting-P-type-ATPase	unknown	unknown	gnl\|CDD\|223550
NZ_ALTM01000016.1\|WP_001019133.1\|265222_267055_+\|elongation-factor-4	unknown	unknown	gnl\|CDD\|235462
NZ_ALTM01000016.1\|WP_000523795.1\|254843_255581_+\|acyl-ACP-thioesterase	unknown	unknown	gnl\|CDD\|366738
NZ_ALTM01000016.1\|WP_001875996.1\|275767_276349_-\|CatB-related-O-acetyltransferase	unknown	unknown	gnl\|CDD\|100040
NZ_ALTM01000016.1\|WP_000621139.1\|270701_271166_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_ALTM01000016.1\|WP_000678287.1\|267300_269934_+\|pneumococcal-type-histidine-triad-protein	unknown	unknown	gnl\|CDD\|380193
NZ_ALTM01000016.1\|WP_000590706.1\|262715_263381_+\|type-II-A-CRISPR-associated-protein-Csn2	csn2	pfam09711_csn2_CAS-II-A	gnl\|CDD\|213408
NZ_ALTM01000016.1\|WP_000653357.1\|256341_256998_+\|TIGR01906-family-membrane-protein	unknown	unknown	gnl\|CDD\|226884
NZ_ALTM01000016.1\|WP_000323544.1\|255581_256352_+\|TIGR01457-family-HAD-type-hydrolase	unknown	unknown	gnl\|CDD\|319832
NZ_ALTM01000016.1\|WP_001241816.1\|253236_253617_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|131381
NZ_ALTM01000016.1\|WP_000900527.1\|264100_264361_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_ALTM01000016.1\|WP_000929490.1\|261521_262391_+\|type-II-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274694	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is a prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 variant of the NMENI subtype of CRISPR/Cas system.	5.3759e-138
NZ_ALTM01000016.1\|WP_000438313.1\|264670_265087_+\|nucleoside-diphosphate-kinase	gnl\|CDD\|179085	PRK00668, ndk, mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-; Validated.	6.25805e-79
NZ_ALTM01000016.1\|WP_000065320.1\|274543_275647_+\|DUF2974-domain-containing-protein	gnl\|CDD\|371412	pfam11187, DUF2974, Protein of unknown function (DUF2974). This bacterial family of proteins has no known function.	1.44123e-105
NZ_ALTM01000016.1\|WP_000159235.1\|252840_253212_+\|YbgA-family-protein	gnl\|CDD\|377982	pfam08349, DUF1722, Protein of unknown function (DUF1722). This domain of unknown function is found in bacteria and archaea and is homologous to the hypothetical protein ybgA from E. coli.	7.7979e-28
NZ_ALTM01000016.1\|WP_000180008.1\|270033_270693_+\|HD-domain-containing-protein	gnl\|CDD\|224336	COG1418, COG1418, Predicted HD superfamily hydrolase [General function prediction only].	1.30028e-33
NZ_ALTM01000016.1\|WP_000122197.1\|262387_262729_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	1.70123e-50
NZ_ALTM01000016.1\|WP_000914659.1\|253709_254840_+\|oxygen-independent-coproporphyrinogen-III-oxidase	gnl\|CDD\|236309	PRK08599, PRK08599, oxygen-independent coproporphyrinogen III oxidase.	0
NZ_ALTM01000016.1\|WP_001040077.1\|257386_261520_+\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	gnl\|CDD\|226044	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms].	0
NZ_ALTM01000016.1\|WP_000665410.1\|271165_271600_+\|peptide-methionine-(R)-S-oxide-reductase-MsrB	gnl\|CDD\|234692	PRK00222, PRK00222, peptide-methionine (R)-S-oxide reductase MsrB.	6.40832e-86
NZ_ALTM01000016.1\|WP_000168894.1\|271751_274544_+\|cation-transporting-P-type-ATPase	gnl\|CDD\|223550	COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism].	0
NZ_ALTM01000016.1\|WP_001019133.1\|265222_267055_+\|elongation-factor-4	gnl\|CDD\|235462	PRK05433, PRK05433, GTP-binding protein LepA; Provisional.	0
NZ_ALTM01000016.1\|WP_000523795.1\|254843_255581_+\|acyl-ACP-thioesterase	gnl\|CDD\|366738	pfam01643, Acyl-ACP_TE, Acyl-ACP thioesterase. This family consists of various acyl-acyl carrier protein (ACP) thioesterases (TE) these terminate fatty acyl group extension via hydrolysing an acyl group on a fatty acid.	3.68196e-111
NZ_ALTM01000016.1\|WP_001875996.1\|275767_276349_-\|CatB-related-O-acetyltransferase	gnl\|CDD\|100040	cd03349, LbH_XAT, Xenobiotic acyltransferase (XAT): The XAT class of hexapeptide acyltransferases is composed of a large number of microbial enzymes that catalyze the CoA-dependent acetylation of a variety of hydroxyl-bearing acceptors such as chloramphenicol and streptogramin, among others. Members of this class of enzymes include Enterococcus faecium streptogramin A acetyltransferase and Pseudomonas aeruginosa chloramphenicol acetyltransferase. They contain repeated copies of a six-residue hexapeptide repeat sequence motif (X-[STAV]-X-[LIV]-[GAED]-X) and adopt a left-handed parallel beta helix (LbH) structure. The active enzyme is a trimer with CoA and substrate binding sites at the interface of two separate LbH subunits. XATs are implicated in inactivating xenobiotics leading to xenobiotic resistance in patients.	3.28709e-71
NZ_ALTM01000016.1\|WP_000621139.1\|270701_271166_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	4.90455e-18
NZ_ALTM01000016.1\|WP_000678287.1\|267300_269934_+\|pneumococcal-type-histidine-triad-protein	gnl\|CDD\|380193	NF033189, internalin_A, class 1 internalin InlA. Internalins, as found in the intracellular human pathogen Listeria monocytogenes, are paralogous surface or secreted proteins with an N-terminal signal peptide, leucine-rich repeats, and usually a C-terminal LPXTG processing and cell surface anchoring site. See PMID:17764999 for a general discussion of internalins. Members of this family are internalin A (InlA), a class 1 (LPXTG-type) internalin.	8.24068e-22
NZ_ALTM01000016.1\|WP_000590706.1\|262715_263381_+\|type-II-A-CRISPR-associated-protein-Csn2	gnl\|CDD\|213408	cd09758, Csn2, CRISPR/Cas system-associated protein Csn2. Csn2 is a Nmeni subtype-specific Cas protein, which may function in the adaptation process which mediates the incorporation of foreign nucleic acids into the microbial host genome. Csn 2 may interact directly with double-stranded DNA. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA. Csn2 has been predicted to be a functional analog of Cas4 based on anti-correlated phyletic patterns; also known as SPy1049 family.	3.61399e-122
NZ_ALTM01000016.1\|WP_000653357.1\|256341_256998_+\|TIGR01906-family-membrane-protein	gnl\|CDD\|226884	COG4478, COG4478, Predicted membrane protein [Function unknown].	9.75792e-52
NZ_ALTM01000016.1\|WP_000323544.1\|255581_256352_+\|TIGR01457-family-HAD-type-hydrolase	gnl\|CDD\|319832	cd07530, HAD_Pase_UmpH-like, UmpH/NagD family phosphatase, similar to Escherichia coli UmpH UMP phosphatase/NagD nucleotide phosphatase and Mycobacterium tuberculosis Rv1692 glycerol 3-phosphate phosphatase. Escherichia coli UmpH/NagD is a ribonucleoside tri-, di-, and monophosphatase with a preference for purines, it shows peak activity with UMP and functions in UMP-degradation. It is also an effective phosphatase with AMP, GMP and CMP. Mycobacterium tuberculosis phosphatase, Rv1692 is a glycerol 3-phosphate phosphatase. Rv1692 is the final enzyme involved in glycerophospholipid recycling/catabolism. This subfamily belongs to the UmpH/NagD phosphatase family, and to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	1.19143e-132
NZ_ALTM01000016.1\|WP_001241816.1\|253236_253617_+\|hypothetical-protein	gnl\|CDD\|131381	TIGR02328, TIGR02328, conserved hypothetical protein. Members of this protein are found in a small number of taxonomically well separated species, yet are strongly conserved, suggesting lateral gene transfer. Members are found in Treponema denticola, Clostridium acetobutylicum, and several of the Firmicutes. The function of this protein is unknown. [Hypothetical proteins, Conserved].	6.45558e-80

>NZ_ALTM01000016.1|WP_000590706.1|262715_263381_+|type-II-A-CRISPR-associated-protein-Csn2
MIKINFPILDEPLVLSNATILTIEDVSVYSSLVKHFYQYDVDEHLKLFDDKQKSLKATELMLVTDILGYDVNSAPILKLIHGDLENQFNEKPEVKSMVEKLAATITELIAFECLENELDLEYDEITILELIKALGVKIETQSDTIFEKCFEIIQVYHYLTKKNLLVFVNSGAYLTKDEVIKLCEYINLMQKSVLFLEPRRLYDLPQYVIDKDYFLIGENMV
>NZ_ALTM01000016.1|WP_000122197.1|262387_262729_+|CRISPR-associated-endonuclease-Cas2
MSYRYMRMILMFDMPTETVEERKAYRKFRKFLLSEGFIMHQFSVYSKLLLNNTANNAMIGRLKVNNPKKGSITLLTVTEKQFARMVYLHGEHNMSVANSDSRLVFLGDSYDQD
>NZ_ALTM01000016.1|WP_000929490.1|261521_262391_+|type-II-CRISPR-associated-endonuclease-Cas1
MAGWRTVVVNTHSKLSYKNNHLIFKDSYQTEMIHLSEIDILIMETTDIVLSTMLIKRLVDENILVIFCDDKRLPTAMLMPYYARHDSSLQLSRQMSWIEDVKADVWTSIIAQKILNQSFYLGECSFFEKSQSIMNLYHDLESFDPSNREGHAARIYFNTLFGNDFSREQDNPINAGLDYGYSLILSMFAREVVKCGCMTQFGLKHANQFNQFNLASDIMEPFRPIVDRIIYENRQSDFVKMKRELFSMFSETYSYNGKEMYLSNIVSDYTKKVIKSLNSDGNGIPEFRI
>NZ_ALTM01000016.1|WP_001040077.1|257386_261520_+|type-II-CRISPR-RNA-guided-endonuclease-Cas9
MNKPYSIGLDIGTNSVGWSIITDDYKVPAKKMRVLGNTDKEYIKKNLIGALLFDGGNTAADRRFKRTARRRYTRRRNRILYLQEIFAEEMSKVDDSFFHRLEDSFLVEEDKRGSKYPIFATMQEEKYYHEKFPTIYHLRKELADKKEKADLRLVYLALAHIIKFRGHFLIEDDRFDVRNTDIQKQYQAFLEIFDTTFENNHLLSQNVDVEAILTDKISKSAKKDRILAQYPNQKSTGIFAEFLKLIVGNQADFKKHFNLEDKTPLQFAKDSYDEDLENLLGQIGDEFADLFSVAKKLYDSVLLSGILTVTDLSTKAPLSASMIQRYDEHHEDLKHLKQFVKASLPENYREVFADSSKDGYAGYIEGKTNQEAFYKYLLKLLTKQEGSEYFLEKIKNEDFLRKQRTFDNGSIPHQVHLTELRAIIRRQSEYYPFLKENQDRIEKILTFRIPYYVGPLAREKSDFAWMTRKTDDSIRPWNFEDLVDKEKSAEAFIHRMTNNDLYLPEEKVLPKHSLIYEKFTVYNELTKVRFLAEGFKDFQFLNRKQKETIFNSLFKEKRKVTEKDIISFLNKVDGYEGIAIKGIEKQFNASLSTYHDLKKILGKDFLDNTDNELILEDIVQTLTLFEDREMIKKCLDIYKDFFTESQLKKLYRRHYTGWGRLSAKLINGIRNKENQKTILDYLIDDGSANRNFMQLINDDDLSFKPIIDKARTGSHSDNLKEVVGELAGSPAIKKGILQSLKIVDELVKVMGYEPEQIVVEMARENQTTAKGLSRSRQRLTTLRESLANLKSNILEEKKPKYVKDQVENHHLSDDRLFLYYLQNGRDMYTKKALDIDNLSQYDIDHIIPQAFIKDDSIDNRVLVSSAKNRGKSDDVPSIEIVKARKMFWKNLLDAKLMSQRKYDNLTKAERGGLTSDDKARFIQRQLVETRQITKHVARILDERFNNEVDNGKKICKVKIVTLKSNLVSNFRKEFGFYKIREVNDYHHAHDAYLNAVVAKAILTKYPQLEPEFVYGMYRQKKLSKIVHEDKEEKYSEATRKMFFYSNLMNMFKRVVRLADGSIVVRPVIETGRYMGKTAWDKKKHFATVRKVLSYPQNNIVKKTEIQTGGFSKESILAHGNSDKLIPRKTKDIYLDPKKYGGFDSPIVAYSVLVVADIKKGKAQKLKTVTELLGITIMERSRFEKNPSAFLESKGYLNIRDDKLMILPKYSLFELENGRRRLLASAGELQKGNELALPTQFMKFLYLASRYNESKGKPEEIEKKQEFVNQHVSYFDDILQLINDFSKRVILADANLEKINKLYQDNKENIPVDELANNIINLFTFTSLGAPAAFKFFDKIVDRKRYTSTKEVLNSTLIHQSITGLYETRIDLGKLGED
>NZ_ALTM01000016.1|WP_000653357.1|256341_256998_+|TIGR01906-family-membrane-protein
MKDKLLVVLTWIWIISLATLATIYIAWLIYPIEIQFLKLEKVVYLKAETIYYNFNKLMIYLTHPFISDLNMPSFPSSEDGLKHFADVKYLFTLAHGLFVILTFPVIYFLRRGWKQKSIFLYEGFFKIAIMLPIFIVVCAFLLGFDQFFTLFHEVLFPGDSTWQFNPLTDPVIWILPETFFLHCFIIFLLIYETITIILLIIGRKHLKLRKYKNKMQAL
>NZ_ALTM01000016.1|WP_000323544.1|255581_256352_+|TIGR01457-family-HAD-type-hydrolase
MAYKGYLIDLDGTIYKGKSRIPAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVETPLETIYTATMATVDYMNDMNRGKTAYVIGEEGLKKAIADAGYVEDTKNPAYVVVGLDWNVTYDKLATATLAIQNGALFIGTNPDLNIPTERGLLPGAGSLNALLEAATRIKPVFIGKPNAIIMNKALEILNIPRNQAVMVGDNYLTDIMAGINNDIDTLLVTTGFTTVEEVPDLPIQPSYVLASLDEWTFNEG
>NZ_ALTM01000016.1|WP_000523795.1|254843_255581_+|acyl-ACP-thioesterase
MGLLYRETYEVPFYESDTNHYMKLPQLLALALQISAKQSLKLGIGDDIVFKRYGLVWVVTDYIIDIERLPKHAEKIVIETEAKAHNKLLCYRYFYIYGEDGQKIITISSAFVLMDFKTRKIHPVLDDITSIYQSQRIKKVIRGPKYHPIGDSKVKQYHVRYFDLDMNGHVNNSKYLEWMYDVLDLDFLSSHIPKKIDLKYIKEIQYGTDIKSHWYQDGLVTRHDIIGGDAIHAQARIEWQEKKED
>NZ_ALTM01000016.1|WP_000914659.1|253709_254840_+|oxygen-independent-coproporphyrinogen-III-oxidase
MLKKPTSAYVHIPFCTQICYYCDFSKVFIKNQPVDAYLQALIREFRSYDITELRTLYIGGGTPTSISAVQLDYLLTELIRDLNLNTLEEFTIEANPGDLTVDKIEVLQKSAVNRVSLGVQTFNDKHLKRIGRSHNEAQIYSTIDALKTAGFQNISIDLIYALPGQTMDDVRSNVAKALSLNIPHLSLYSLILEHHTVFMNKMRRGKLHLPTEDLEAEMFEYIISEMERNGFEHYEISNFTKPGFESRHNLMYWENVEYYGVGAGASGYLDGIRYRNRGPIQHYLKGVSEGNARLSEEVLSKNEMMEEELFLGLRKKEGVSIGKFEQKFGTSFEKRYGQIVQELQSDGLLKENNGFIQMTKKGLFLGDTVAEKFIVE
>NZ_ALTM01000016.1|WP_001241816.1|253236_253617_+|hypothetical-protein
MRLWHQDIIELLPRQQLLGQHRECCALRGNGWGRKHETVDYVFRYSPYRLFAYHQLVMEEMMERGYRVSKEWLIAEYRGMKCPRYDTLNPVDLETPIYPEHNQDYLQECLWNLKAKGIDLPINKIK
>NZ_ALTM01000016.1|WP_000159235.1|252840_253212_+|YbgA-family-protein
MTKEAKLLWAKHKYLVLSKSQKIYLDIRQTLKSPNCTVLDVQSLIDQAVLLEESPSQVTNAYMHIWGYFKNKAERQEKEEFLTLLEKYRKTGYQRRKLLAFLKQLLAKYPNSYLQNSSIFEEE
>NZ_ALTM01000016.1|WP_000900527.1|264100_264361_+|hypothetical-protein
MLGHHCGVLVFCYTEINFQRMWGKAVIRLIQDVIQNLVGQANEITPIYQFDWETYILATKKYERHLEVCLLVENSNCFSDSKRMCR
>NZ_ALTM01000016.1|WP_000438313.1|264670_265087_+|nucleoside-diphosphate-kinase
MEQTFFMIKPDGVKRGFIGEVISRIERRGFSIDRLEVRHADADILKRHYAELTDRPFFPTLVDYMTSGPVIIGVISGEEVISTWRTMMGSTNPKDALPGTIRGDFAQAPSPNQATCNIVHGSDSPESATREIAIWFNN
>NZ_ALTM01000016.1|WP_001019133.1|265222_267055_+|elongation-factor-4
MNIEDLKKRQEKIRNFSIIAHIDHGKSTLADRILEKTETVSSREMQAQLLDSMDLERERGITIKLNAIELNYTAKDGETYIFHLIDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQTLANVYLALDNDLEILPVINKIDLPAADPERVRAEVEDVIGLDASEAVLASAKAGIGIEEILEQIVEKVPAPTGEVDAPLQALIFDSVYDAYRGVILQVRIVNGMVKPGDKIQMMSNGKTFDVTEVGIFTPKAVGRDFLATGDVGYIAASIKTVADTRVGDTITLANNPAIEPLHGYKQMNPMVFAGLYPIESNKYNDLREALEKLQLNDASLQFEPETSQALGFGFRCGFLGLLHMDVIQERLEREFNIDLIMTAPSVVYHVNTTDGEMLEVSNPSEFPDPTRVDSIEEPYVKAQIMVPQEFVGAVMELAQRKRGDFVTMDYIDDNRVNVIYQIPLAEIVFDFFDKLKSSTRGYASFDYEISEYRRSQLVKMDILLNGDKVDALSFIVHKEFAYERGKLIVDKLKKIIPRQQFEVPIQAAIGQKIVARSDIKALRKNVLAKCYGGDVSRKRKLLEKQKAGKKRMKAIGSVEVPQEAFLSVLSMDDDDKK
>NZ_ALTM01000016.1|WP_000678287.1|267300_269934_+|pneumococcal-type-histidine-triad-protein
MKGQKIIALAGLVLSCHFALTACHTQEHKNSHHIKTKQVAKKKANKKKVSVKESHKKRKGVAGVDFPTDDGFLLTKDSKILSHTDSGIVVAHGNHSHFIFYSDLKGSKFSYLIPNANAKTNKKQAVRNFKAGAVAVNTLNDGYVFNPADIVSEDANGYVVRHGDHFHYIPKASLSQQKQVQASRAVSRLGNQNNSHYRVNSSKIAGLHHPTSDGFLFNGQGIKGTTPTGILVEHHNHLHFISFADLRKGGWGSIADRYQPQKKVDSKKQSPSSKKPRTENTLPKDIKDKLAYLARELHLDISRIRVLKTLNGEIGFEYPHDDHTHVIMAKDIDLSKPIPNPHHDDEDHHKGHHHDESDHKHEEHEHTKSNKLSDEDQKKLIYLAEKLGLNPNQIEVLTSEDGSIIFKYPHDDHSHTIASKDIEIGKPIPDGHHDHSHAKDKVGMATLKQIGFDDEIIQDILHADAPTPFPSNETNPEKMRQWLATVTKINIGQRTNPFQRFGLSLMPNIEVLGIGFTPINDMTPVLQFKKLKQLWMTNTGITDYSFLDKMPLLEGLDISQNGIKDLSFLTKYKQLSLIAAANNGITSLKPLAELPNLQFLVLSHNNISDLTPLSNLTKLQELHLDHNNVKNLSALSGKKDLKVLDLSNNKSADLSTLKTTSLETLLLNETNTSNLSFLKQNPKVSNLTINNAKLASLDGIEESDEIVKVEAEGNQIKSLVLKNKQGSLKFLNVTNNQLTSLEGVNNYTSLETLSVSKNKLESLDIKTPNKTVTNLDFSHNNVPTSQLKLNEKNIPEAVAKNFPAVVEGSMVGNGSLAEKAAMASKEDKQVSDNTNHQKNTEKSAQANADSKKENPKTHDEHHDHEETDHAHVGHHHH
>NZ_ALTM01000016.1|WP_000180008.1|270033_270693_+|HD-domain-containing-protein
MTMVKREDVILNATENMVYHKLKNDPSGHDWFHIVRVRNLAVELAHKEGANTFICQMAALLHDIIDDKICQDSKQASYELTQWLYSQDLAIAEVEHILDILENISFKAGTGLTMKTLEGQIVQDADRLDAMGAIGIARTMAYSGSKGRLIHDPNLKPRENLTLEEYRNGQDTAIMHFYEKLLKLKDLMNTKQGKMLAQKRHDFLELYLAEFYAEWNGKG
>NZ_ALTM01000016.1|WP_000621139.1|270701_271166_+|GNAT-family-N-acetyltransferase
MIRRAKEKDLPAIAELLKQILVLHHGVRPDIFHTRGSKFSKEQLKEMLMDESRPIFVYESDEGKVVAHLFLQLQEKRDLPRKSFKTLYIDDLCIDEEVRGQQIGQKLMDFARQYAKKHGCYNITLNVWNDNQRAVSFYEKLGFKPQQTQMEEIL
>NZ_ALTM01000016.1|WP_000665410.1|271165_271600_+|peptide-methionine-(R)-S-oxide-reductase-MsrB
MKETQEELRQRIGHTAYQVTQNSATEHAFTGKYDDFFEEGIYVDIVSGEVLFSSLDKFQSGCGWPAFSKPIENRMVTNHQDHSHGMHRIEVRSRQADSHLGHVFNDGPVDAGGLRYCINSAALDFIPYDQMAKRGYGDYLSLFD
>NZ_ALTM01000016.1|WP_000168894.1|271751_274544_+|cation-transporting-P-type-ATPase
MASTNNVSDTNTCFAKEELEEIFEELGTTQGGLSDEEVAVRQKKYGLNLLSEVEQESIILLFLKNFTSLMAILLWVGGFVAIVSNSLELGLAIWMVNVINGIFSFIQEYRASQATQALKKMLPSYSRVLRKSSEEKILSEQLVPGDIVLIEEGDRISADGRLIKTTDLQVNQSALTGESNPIYKDSNVENDQSKTLIECDNMVFAGTTVSSGSATMVVTAIGMQTQFGQIADLTQGMKSEKSPLQRELDRLTKQISIISITVGIIFFLAATFFVKEPVSKSFIFALGMIVAFIPEGLLPTVTLSLAMAVQRMAKEHALVKKLSSVETLGATSVICSDKTGTLTQNEMTVNHLWQNGKSYQVTGLGYAPEGQILFEGDNICFGNSDRGDLEKLIRFAHLCSNAQVLPPNDERSTYTVLGDPTEACLNVLLEKSGINRQENRKFAPRLKELPFDSVRKRMTTIHSLGGDEKDKKISITKGAPKEILDLSDYVLSDGKVIPLNKEERNKIQLANDTFAKDGLRVLAVSYCDIEGFSKEQWTQENLEQHMVFIGLIAMSDPPREGVREAIDKCHAASIRIIMVTGDYGLTALSIAKNIGIIRNDGAKVISGLELSEMTDSQLKKELSGEAVFARVAPEQKYRVVTILQEMGEVVAVTGDGVNDAPALKKSDIGVAMGVTGTDVAKESADMILTDDHFASIVHAVEEGRAVYQNIKKFLTYIFNSNTPEAVPSAFFLFSKGFIPLPLTVMQILAVDLGTDMLPALGLGVEPPETDVMNRPPRRLTDRLLDKGLLIKSFLWYGTIESVLAMGGFFWAHYLRYGNFTFFVANGIPYREATTMTLGAIIFSQIGMVMNSRTSYQSIKTLSIFGNKLINFGIIMEILAFLVLVYVPLFHNLFNTASLGLSHWLYLIGCPFIMIGLDEVRKLFSSRKNKR
>NZ_ALTM01000016.1|WP_000065320.1|274543_275647_+|DUF2974-domain-containing-protein
MSNIITYLKNNSNLTFDELALNDVDILCLNEFGYISFEKLINTTEMKSVLVCELYHEYLQTMAKSYSFMFTSQRHDLCQLMMTSKRFKNLTLSYYRAEISLEFEKQFAAMVFTIPNINYHQVVFRGTDANLIGWKEDFKLTYMREISAHRSAIKYLNTILPYFDKVVLSGHSKGGNLALYAAMFTKPDLKAKIDLIWLIDSPGLQKTLLPTTEYKTTKQKCIRLLPEESIVGMMLYSDIEPLIISSNARGILQHDVTTWEIQEPAILKTGTGLSLKSICFEKTFQQWMAELKSQERKLFFDLLFDSFLSSGVSSLDDFNLASRAKMMKAFHSFRELDDDKKRLFNKSLKLLVTIFLGAYHDNSRETK
>NZ_ALTM01000016.1|WP_001875996.1|275767_276349_-|CatB-related-O-acetyltransferase
MRTDMSTGASYPKYRFSVGKYTYGYQQFFYEGVNLKEIGAFCSIAQNVTITGMNHPTDHITTNPFIYYKSRGFINEDRADLIDEKKNGKVIIGNDVWIGTNVTILPSVTIGNGAIIGAGSVITKDIPDYAVVAGTPAKIIKYRFSEEEITLLNASQWWNWSDEAIKEHISEFSDKKEFFNTLKSISENKNHKL

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_ALTM01000016_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_ALTM01000016_2

454720-454795

Orphan

Consensus_repeat	Method
AGCAACTGATACTTGTTTAACATCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_ALTM01000016_2

>merge|NZ_ALTM01000016|2|454720-454795|CRISPRCasFinder
AGCAACTGATACTTGTTTAACATCACCAGTACTTGGCAACACGCTTGCTTTAGCAACTGATACTTGTTTAACATCA

>NZ_ALTM01000016|2|2|454720-454795|CRISPRCasFinder
AGCAACTGATACTTGTTTAACATCA	CCAGTACTTGGCAACACGCTTGCTTT
AGCAACTGATACTTGTTTAACATCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_ALTM01000016.1\|WP_000162146.1\|462077_463418_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|341046
NZ_ALTM01000016.1\|WP_000447008.1\|450555_450783_-\|hypothetical-protein	unknown	unknown	unknown
NZ_ALTM01000016.1\|WP_000447421.1\|459256_459700_-\|hypothetical-protein	unknown	unknown	unknown
NZ_ALTM01000016.1\|WP_001088029.1\|451057_453856_-\|LPXTG-cell-wall-anchor-domain-containing-protein	unknown	unknown	gnl\|CDD\|375647
NZ_ALTM01000016.1\|WP_001867987.1\|463688_464381_+\|hypothetical-protein	unknown	unknown	unknown
NZ_ALTM01000016.1\|WP_001042361.1\|453922_454633_-\|LPXTG-cell-wall-anchor-domain-containing-protein	unknown	unknown	gnl\|CDD\|223021
NZ_ALTM01000016.1\|WP_000481327.1\|460891_461875_-\|GMP-reductase	unknown	unknown	gnl\|CDD\|235479
NZ_ALTM01000016.1\|WP_001282475.1\|460406_460778_-\|hypothetical-protein	unknown	unknown	unknown
NZ_ALTM01000016.1\|WP_000822468.1\|457958_458984_-\|replication-initiator-protein-A	unknown	unknown	gnl\|CDD\|369151
NZ_ALTM01000016.1\|WP_000004254.1\|449964_450450_-\|hypothetical-protein	unknown	unknown	unknown
NZ_ALTM01000016.1\|WP_000609828.1\|447662_448121_-\|hypothetical-protein	unknown	unknown	unknown
NZ_ALTM01000016.1\|WP_000651825.1\|449163_449916_-\|membrane-protein	unknown	unknown	unknown
NZ_ALTM01000016.1\|WP_000208122.1\|457577_457775_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_ALTM01000016.1\|WP_000040950.1\|448652_449150_-\|hypothetical-protein	unknown	unknown	unknown
NZ_ALTM01000016.1\|WP_001037292.1\|447241_447601_-\|PrgI-family-protein	unknown	unknown	gnl\|CDD\|378907
NZ_ALTM01000016.1\|WP_000129105.1\|456895_457195_-\|hypothetical-protein	unknown	unknown	unknown
NZ_ALTM01000016.1\|WP_000938679.1\|457771_457957_-\|hypothetical-protein	unknown	unknown	unknown
NZ_ALTM01000016.1\|WP_000191926.1\|459965_460223_-\|DUF3850-domain-containing-protein	unknown	unknown	gnl\|CDD\|372409
NZ_ALTM01000016.1\|WP_000362731.1\|448181_448409_-\|hypothetical-protein	unknown	unknown	unknown
NZ_ALTM01000016.1\|WP_000176428.1\|444909_447261_-\|DUF87-domain-containing-protein	unknown	unknown	gnl\|CDD\|274279

Protein	Function_ID	Function_description	E-value
NZ_ALTM01000016.1\|WP_000162146.1\|462077_463418_-\|MFS-transporter	gnl\|CDD\|341046	cd17503, MFS_LmrB_MDR_like, Bacillus subtilis lincomycin resistance protein (LmrB) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily. This subfamily is composed of multidrug resistance (MDR) transporters including Bacillus subtilis lincomycin resistance protein LmrB, and several proteins from Escherichia coli such as the putative MDR transporters EmrB, MdtD, and YieQ. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. For example, MMR confers resistance to the epoxide antibiotic methylenomycin. This subfamily belongs to the Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters (MMR-like MDR transporter) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	8.42202e-59
NZ_ALTM01000016.1\|WP_000208122.1\|457577_457775_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	1.56498e-16
NZ_ALTM01000016.1\|WP_001088029.1\|451057_453856_-\|LPXTG-cell-wall-anchor-domain-containing-protein	gnl\|CDD\|375647	pfam18220, BspA_v, Adhesin BspA variable domain. This domain is found in BspA protein present in Streptococcus agalactiae. BspA is an antigen I/II family polypeptide that confers adhesion linked to pathogenesis in group B Streptococcus. This domain is referred to as the variable domain (BspA-V). BspA-V is responsible for binding to scavenger receptor gp340. BspA-V adopts a fold that is distinct from those of other AgI/II family polypeptide variable domains.	3.68869e-86
NZ_ALTM01000016.1\|WP_001042361.1\|453922_454633_-\|LPXTG-cell-wall-anchor-domain-containing-protein	gnl\|CDD\|223021	PHA03247, PHA03247, large tegument protein UL36; Provisional.	3.87345e-05
NZ_ALTM01000016.1\|WP_000481327.1\|460891_461875_-\|GMP-reductase	gnl\|CDD\|235479	PRK05458, PRK05458, guanosine 5'-monophosphate oxidoreductase; Provisional.	0
NZ_ALTM01000016.1\|WP_001037292.1\|447241_447601_-\|PrgI-family-protein	gnl\|CDD\|378907	pfam12666, PrgI, PrgI family protein. This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 116 and 146 amino acids in length. This protein is found in an operon that is part of a Type IV secretion system.	0.00186887
NZ_ALTM01000016.1\|WP_000191926.1\|459965_460223_-\|DUF3850-domain-containing-protein	gnl\|CDD\|372409	pfam12961, DUF3850, Domain of Unknown Function with PDB structure (DUF3850). The search results from NCBI sequence alignment indicates a conserved domain belonging to ASCH superfamily. Dali searching results show that the protein is a structurally similar to the PUA domain, suggesting it may be involved in RNA recognition. It has been reported that the deletion of PUA genes results in impaired growth (RluD) and competitive disadvantage (TruB) in Escherichia coli. Suggestions have been put forward that, apart from their usual catalytic role, certain PUS enzymes (e.g. TruB) may also act as chaperones for RNA folding. The interface interaction indicates that the biomolecule of protein NP_809782.1 should be a dimer.	1.25228e-26
NZ_ALTM01000016.1\|WP_000822468.1\|457958_458984_-\|replication-initiator-protein-A	gnl\|CDD\|369151	pfam06970, RepA_N, Replication initiator protein A (RepA) N-terminus. This of family of predicted proteins represents the N-terminus (approximately 80 residues) of replication initiator protein A (RepA), a DNA replication initiator in plasmids. Most proteins in this family are bacterial, but archaeal and eukaryotic members are also included.	2.54502e-32
NZ_ALTM01000016.1\|WP_000176428.1\|444909_447261_-\|DUF87-domain-containing-protein	gnl\|CDD\|274279	TIGR02746, hypothetical_protein, type-IV secretion system protein TraC. The protein family described here is common among the F, P and I-like type IV secretion systems. Gene symbols include TraC (F-type), TrbE/VirB4 (P-type) and TraU (I-type). The protein conyains the Walker A and B motifs and so is a putative nucleotide triphosphatase.	9.6429e-17

>NZ_ALTM01000016.1|WP_001042361.1|453922_454633_-|LPXTG-cell-wall-anchor-domain-containing-protein
MNKRKLLTVLSIASVAVLSSVTFADEITPSDPTAPSTPLITPTPVDPGTPTDTTKPSTPVDPGTPTDTTKPSTPVDPGTPTDTTKPSTPVDSGTSTNPSDSEATNTNLGTKPTDVVKSETPKIPEVPSTVTPDVIDKVDKETGNITIKPIQISPDKTIIGTQNGNVIIRDSSGSHLVSASEVGGRLNEDGTVTIKDSSGKTKTLPRTGEAKGFLSIIGATILSFVAYLFKQRVTLN
>NZ_ALTM01000016.1|WP_001088029.1|451057_453856_-|LPXTG-cell-wall-anchor-domain-containing-protein
MNSQETKGHGFFRKSKAYGLVCGIALAGAFTLATSQVSADQVTTQATTQTVTQNQAETVTSTQLDKAVDTAKKAAVAVTTTTAVNHATTTDAQADLANQTQAVKDVTAKAQANTQAIKDATAENAKIDAENKAEAERVAKANKAGQAEVDARNKAGQAAVDARNKAKQQAQDDQKAKIDAENKAESQRVSQLNAQNKAKIDAENKDAQAKADATNAQLQKDYQTKLANIKSVEAYNAGVRQRNKDAQAKADATNAQLQKDYQAKLALYNQALKAKAEADKQSINNVAFDIKAQAKGVDNAEYGNSIMTAKTKPDGSFEFNHDMIDGVKTIGYGKLTGKVNHHYVANKDGSVTAFVDSVTLYKYEYRNVAQNAAVNQNIVFRVLTKDGRPIFEKAHNGNKTFAETLNKTLQLNLKYELKPHASSGNVEVFKIHDDWVHDTHGSALVSYVNNNDAVPNVVIPEQPTPPKPEKVTPEAEKPVPEKPVEPKLVTPVLKTYTPVKFIPREYKPVPSTPETFTPEKFTPAQPKVKPHVSVPEKINYKVAVHPVQIPKATPTKKVLDENGQSINGKSVLPNATLDYVAKQNFSQYKGIKASAEAIAKGFAFVDQPNEALAELTVKSIKASNGDDVSSLLEMRHVLSKDTLDQKLQSLIKEAGISPVGEFYMWTAKDPQAFYKAYVQKGLDITYNLSFKVKKEFTKGQIKNGVAQIDFGNGYTGNIVVNDLTTPEVHKDVLDKEDGKSINNGTVKLGDEVTYKLEGWVVLANRGYDLFEYKFVDHLQHTHDLYLKDKVVAKVAITLKDGTVIPKGTNLVQYTETVYNKETGRYELAFKADFLAQVSRSSAFGADDFIVVKRIKAGDVYNTADFFVNGNKVKTETVVTHTPEKPKPVMPQKVTPKAPALPSTGEQGVSVLTVLGAALLSLLGLVGFKKRQQ
>NZ_ALTM01000016.1|WP_000447008.1|450555_450783_-|hypothetical-protein
METAVRVVTAMGAILAIVGLGWVLTGAFDYFAGRKNGSPQMMDQGFTSMISGGALAVIAAGVAAAIVAAMRAISF
>NZ_ALTM01000016.1|WP_000004254.1|449964_450450_-|hypothetical-protein
MSESFDYVAFARDFEKRHGRPPTAEELEKANVEGYKDKSSFGERLKTGLSFVIRNFFRALLILIQTPVYLTLFFFNLIKSAFAVVIMCIITKAVFGVIIAEIFDSQNIDNLSQAPKLLGFFAQDFMTNNLEPIYFTEIDIIICIIFSVFLALVMTFSKSEV
>NZ_ALTM01000016.1|WP_000651825.1|449163_449916_-|membrane-protein
MKDILSELTKGLGSYNSSVNNSMTAVNKSLMAIGYILVSILFLLELLSWYRFIRNQGGEMTWKLFLEVAVKYFIAYFLVSQSGAILNAILWFTNTVTKLIGVDLSGSNLFEFKALKKGAYGIRTGLNFLAYLIGATAIVSIKVMVLLRFIELYFYKAIAPVIVAFWMGDDTRHIAKNFLKTFGAIALQSAVIIILLAIWQGFKVDTAMQLDKNSWLGTYAPAISYIGKCIIFLILLFGSQRKAKQLLQVS
>NZ_ALTM01000016.1|WP_000040950.1|448652_449150_-|hypothetical-protein
MSKLQQLIEKDFLRLTLENSPLHRSQTDCDYSDTCDRDVEQVYERLKGLIVLLLLKNQLKLSDMSRENRINCLETSGYFGIAAHRYASDSGDIAYLTEVLSIMYEDAAYGAMNGIINKNEFHALICQWLNYFDYDKIEFKGDKNFERYFQEQKEKHGELFEAFGL
>NZ_ALTM01000016.1|WP_000362731.1|448181_448409_-|hypothetical-protein
MDLEQLKQRRDELTRDNEWMDGLIKEKEEELWELKVRSIAASELARSAMQSAMRTAGIVDSFYGPSAQSSDNQTN
>NZ_ALTM01000016.1|WP_000609828.1|447662_448121_-|hypothetical-protein
MINQGQEYQYFKDKISHLEREVSRLSSYEYEHRLLKDVIADCLLQGQLTVSELPQAIRLIQGDDLFYTYAWRFVEATGDCQAGITILKILQDDLNYFFAIGKLSQKQYSQWLEKWLSFLERGRIAFKGEKDFERYFQDQTEANRSLFSDFNL
>NZ_ALTM01000016.1|WP_001037292.1|447241_447601_-|PrgI-family-protein
MNKLGSEFFKAIDQFERGIIGSFTWRQILMFFGIVLGVGLATVISLLQLPSILFYLSLVLTVPPAFIYGIKKDEHIKEVITFRLKVQERAYQTEYESEENYGAFIPQKGIQEWNDPNEN
>NZ_ALTM01000016.1|WP_000176428.1|444909_447261_-|DUF87-domain-containing-protein
MTLTKTEKERAKQLQRALKASTQNTIQYTSLFEDGLMHIVDESYSKTWQLGDTNYITGSEDEKLDIIEYYVDALNGLDSENTYQLTILNRPVPTTLLDQITYDLEGDERDVFRKEYNNIIRSRFAKDQNNFKVEKFVTVSTRAKDRKQAYRKLNDVDTHFTTQFQLVDVLLKSLDGTERLNIFADLLRGNPYLDVDYKDVRISGLSTKSFIAPGRLWFQPDQFMMDKKYCKILFPRTFPAFLNDRLIKSLTDIGIELAISIHAQPYDVAEAVKKVNTAEAGVKMDMVKSQVSAAQKGISSNLAVSSVAQDTADEAEKWKTEINDNDQKMFSGVFLVMVKADSAEELADYTSRIKQAGRKHVIEFEETYYHQEEALNSMLPIGKTYIDVKRRFMRDMTTTNIATQIPFTNTDLQSQSPLANYYGQNQISNNIISLDRQRDLYTSSGVILGSSGSGKSVFVKINEVIPAILRFPNDRVIIVDPEEEYVDIGHAFGAQVIDIYPGTKTHFNLMDIPDLNKLRDEDKDFVGQKASLIMGLFENILQEVTDDDVSLIDRVTHLCYEQITDRTPTLKDWHDILLEQPEEEAQSLALKSESYTKGSQDIFAYETNVDLNNQVVIFNLKKLSGKLKPFAMMVIQDYIWQHVVDHKDEFVTRVYFDEMQNQFETDDQAAFFSKMYARIRKYGSIPTGITQNVETLLSRKEGRNLLYNSEFLVLLKQKKTTIPYLLKTINLTDALVRYIEKPKAIGTGLIIAGTTTVPFENPIPEDTELFRLVATDAYRKMES
>NZ_ALTM01000016.1|WP_000129105.1|456895_457195_-|hypothetical-protein
MTDETKKVYLRDLRNLGKQGGATARLEDGTELFLKPDYAVRTAKGYVDGIPRDVEFHLTYRSIFNQIRTIKKDGHLVARKERSPSGLVLQLTGKGYKRP
>NZ_ALTM01000016.1|WP_000208122.1|457577_457775_-|helix-turn-helix-transcriptional-regulator
MTTITQNRVKELRKQAGLSQQALADQIGVMRKTISHWELGNHRISTDNAKKLSQFFQVSIDDLLE
>NZ_ALTM01000016.1|WP_000938679.1|457771_457957_-|hypothetical-protein
MLQDEFRPIPHKVLTIGRSPKESVIAIPKAIFNLPPEEKAQALKELEEDMEQHKAKGGDST
>NZ_ALTM01000016.1|WP_000822468.1|457958_458984_-|replication-initiator-protein-A
MKRISARQVQSSERFYRIPKIFVESPFYKSMSTDAKFTYAILKDRFELSLKNNWIDKNGDVYLIYTVTELQEILGYGNKKVIKLKKELQEYGLLEEVRQGLNKPNLLYLGNVDYQNVPTEEIHSKPSSVAEVSKQHFQKNQGNVKMTRQKMSKRHANDTENSETELSNDTNRYQGDASLDILSASDSFQMGQHGFLSSKTINRLSLFGKEAKLLENKIYQAKRQVEKDYSHLLQHQEIIYGEVWSQELEREVDKLIFKIKTGENEGKAIKNIPGYFYKMMVRFWKMALLIEKEQGFIALSNQSDYAKSFPEECPSLISYYYPNKLSEKELNQYLTTLRMEE
>NZ_ALTM01000016.1|WP_000447421.1|459256_459700_-|hypothetical-protein
METGIKKGHFKESVEKRIHSQHMRIEPNISNRSTRIRDISYDQSKKLYRVTIVRNGIRYGGKHFKKLGEAQKYKKQLLEDIKRKIKESQMSQTAIAQLTKNMMVFNVVVLSLGYFNVIPYKWSLILWGSAVFTAIFNEISKQIPDEK
>NZ_ALTM01000016.1|WP_000191926.1|459965_460223_-|DUF3850-domain-containing-protein
MTQHLLNCYPEYFEAIMDGTKTFECRYNDRDFKVGDELLLREYDPQKGYTYRCIVRKITYILSDFIGLKDGYVILGVTNEPIDYF
>NZ_ALTM01000016.1|WP_001282475.1|460406_460778_-|hypothetical-protein
MSDNIEIIMDIETLDIFEVIDLDEEKGVTVSDSETFPKEEKASPYDDLNRIWLRNGYYYKPSSLLWEVIENGIIHDLSSRNKHGTYPYYQNLRDGTWGHVKQLTQEEALWLTLELNPDLMNYV
>NZ_ALTM01000016.1|WP_000481327.1|460891_461875_-|GMP-reductase
MFNDIPVFDYEDIQLIPNKCIISSRSQADTSVKLGNYTFKLPVIPANMQTIIDEEVAETLACEGYFYIMHRFNEEERKPFIKRMHDKGLIASISVGVKDYEYDFVTSLKEDAPEFITIDIAHGHSNSVIEMIQHIKQELPETFVIAGNVGTPEAVRELENAGADATKVGIGPGKVCITKVKTGFGTGGWQLAALRWCSKAARKPIIADGGIRTHGDIAKSIRFGASMVMIGSLFAGHLESPGKLVEVDGQQFKEYYGSASEYQKGEHKNVEGKKILLPVKGRLEDTLTEMQQDLQSSISYAGGKELDSLRHVDYVIVKNSIWNGDSI
>NZ_ALTM01000016.1|WP_000162146.1|462077_463418_-|MFS-transporter
MTKKGWRIMPAIITTAILGFSGILIETSMNVTFPLLMKEFGVNPAVIQWVTTGNLLAVAVTVPLSAFMIKNLSERQIFTLANVLFLSGVLIDSFAPNLAILLVGRVLQGVGTGLALPLLFHIILTQIPMERRGLMMGVAAMVTLLAPAVGPTYGGVISGMLGWKMIFMLLAPILIISTFIGLASIPKRQVRINDKLNFPAFVSLGIGLATLLLAIEKMSIFYLLVAIVSFVIFYYLNKQLEFLNLNVFKDKDFSILLYGVLAFQMIPLALSFLLPNLLQLVLHQTSTKAGLFMFPGAIAVVFLSPFAGYLLDKIGAFKPIMIGISLSLIGLIGTAIFIPAKFVVVLLAFDILTKIGMGIGASNMVTTALTKLKPAQSADGNSILNTLQQFAGAFATAVASQIFTIGQVAIPKNGAIIGSQFAVLFVIIVVILAIVGLTYLRKRKAI
>NZ_ALTM01000016.1|WP_001867987.1|463688_464381_+|hypothetical-protein
MLIPKKIVAFASNESENNFFITLKTYFNYLFSIQIITDISTLNHADFDGSFAFHDIETSIPHLVIDSNYLAISQTNSKTEANDIKTFSELSKTMTEFHYMLNFDLFNHLPYRFRLHNKDGQTIYSNHKPEDPFDIYPEEEYPIDKWVQNSLIEKKAKELHLLLPGASQDYILVQSYKRLENDSGQLVGYIEHVHNIKPLLEGYLKESGQAIVGWSDVTSGASISNDDFEL

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_ALTM01000016_1	1.6\|263851\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263851-263880	30	NZ_ALTM01000013.1	32628-32657	0	1.0

1. spacer 1.6|263851|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to position: 32628-32657, mismatch: 0, identity: 1.0

acgctctgaggcagatgaggaacaggcgca	CRISPR spacer
acgctctgaggcagatgaggaacaggcgca	Protospacer
******************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_ALTM01000016_1	1.1\|263518\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263518-263547	30	MK448946	Streptococcus phage Javan456, complete genome	4725-4754	0	1.0
NZ_ALTM01000016_1	1.1\|263518\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263518-263547	30	MK448975	Streptococcus phage Javan526, complete genome	3963-3992	0	1.0
NZ_ALTM01000016_1	1.1\|263518\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263518-263547	30	MK448782	Streptococcus phage Javan501, complete genome	4302-4331	0	1.0
NZ_ALTM01000016_1	1.1\|263518\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263518-263547	30	MK448675	Streptococcus phage Javan129, complete genome	4461-4490	1	0.967
NZ_ALTM01000016_1	1.1\|263518\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263518-263547	30	MK448858	Streptococcus phage Javan166, complete genome	4188-4217	1	0.967
NZ_ALTM01000016_1	1.1\|263518\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263518-263547	30	MK448775	Streptococcus phage Javan489, complete genome	4787-4816	1	0.967
NZ_ALTM01000016_1	1.1\|263518\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263518-263547	30	MK448944	Streptococcus phage Javan452, complete genome	4569-4598	1	0.967
NZ_ALTM01000016_1	1.1\|263518\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263518-263547	30	MK448850	Streptococcus phage Javan132, complete genome	4310-4339	1	0.967
NZ_ALTM01000016_1	1.1\|263518\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263518-263547	30	MK448683	Streptococcus phage Javan149, complete genome	5001-5030	1	0.967
NZ_ALTM01000016_1	1.4\|263719\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263719-263748	30	MK448796	Streptococcus phage Javan53, complete genome	36041-36070	2	0.933
NZ_ALTM01000016_1	1.4\|263719\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263719-263748	30	MK448971	Streptococcus phage Javan52, complete genome	32226-32255	2	0.933
NZ_ALTM01000016_1	1.4\|263719\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263719-263748	30	MK448829	Streptococcus phage Javan7, complete genome	26921-26950	2	0.933
NZ_ALTM01000016_1	1.4\|263719\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263719-263748	30	MK448956	Streptococcus phage Javan48, complete genome	30545-30574	2	0.933
NZ_ALTM01000016_1	1.4\|263719\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263719-263748	30	MH853355	Streptococcus phage LF1, complete genome	17778-17807	2	0.933
NZ_ALTM01000016_1	1.4\|263719\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263719-263748	30	MH853358	Streptococcus phage LF4, complete genome	17778-17807	2	0.933
NZ_ALTM01000016_1	1.4\|263719\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263719-263748	30	MK448837	Streptococcus phage Javan10, complete genome	25450-25479	3	0.9
NZ_ALTM01000016_1	1.4\|263719\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263719-263748	30	MK448742	Streptococcus phage Javan37, complete genome	27241-27270	3	0.9
NZ_ALTM01000016_1	1.4\|263719\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263719-263748	30	MK448851	Streptococcus phage Javan14, complete genome	31180-31209	3	0.9
NZ_ALTM01000016_1	1.1\|263518\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263518-263547	30	MK448933	Streptococcus phage Javan420, complete genome	3918-3947	4	0.867
NZ_ALTM01000016_1	1.4\|263719\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263719-263748	30	MK448749	Streptococcus phage Javan39, complete genome	31818-31847	4	0.867
NZ_ALTM01000016_1	1.4\|263719\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263719-263748	30	MH853356	Streptococcus phage LF2, partial genome	31159-31188	4	0.867
NZ_ALTM01000016_1	1.8\|263983\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263983-264012	30	KC465899	Pelagibacter phage HTVC008M, complete genome	125202-125231	4	0.867
NZ_ALTM01000016_1	1.6\|263851\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263851-263880	30	KY514264	Pectobacterium phage vB_PatP_CB1, complete genome	67388-67417	6	0.8
NZ_ALTM01000016_1	1.6\|263851\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263851-263880	30	NC_048704	Pectobacterium phage Nepra, complete genome	7071-7100	6	0.8
NZ_ALTM01000016_1	1.6\|263851\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263851-263880	30	KY514265	Pectobacterium phage vB_PatP_CB3, complete genome	67570-67599	6	0.8
NZ_ALTM01000016_1	1.8\|263983\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263983-264012	30	NZ_CP035396	Bacillus subtilis strain SRCM103697 plasmid unnamed1, complete sequence	5260-5289	6	0.8
NZ_ALTM01000016_1	1.8\|263983\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263983-264012	30	NZ_CP032856	Bacillus subtilis subsp. subtilis strain PJ-7 plasmid unnamed1, complete sequence	45542-45571	6	0.8
NZ_ALTM01000016_1	1.8\|263983\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263983-264012	30	NZ_MG557999	Escherichia coli strain Eco-36682cz plasmid pEco-36682cz, complete sequence	51740-51769	6	0.8
NZ_ALTM01000016_1	1.8\|263983\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263983-264012	30	NZ_MF497781	Citrobacter freundii strain Cfr-36049cz plasmid pCrf-36049cz, complete sequence	51740-51769	6	0.8
NZ_ALTM01000016_1	1.8\|263983\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263983-264012	30	MT074138	Bacteroides phage DAC17, complete genome	95749-95778	6	0.8
NZ_ALTM01000016_1	1.8\|263983\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263983-264012	30	MT074136	Bacteroides phage DAC15, complete genome	96339-96368	6	0.8
NZ_ALTM01000016_1	1.8\|263983\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263983-264012	30	NZ_CP046030	Staphylococcus chromogenes strain 1401 plasmid unnamed2, complete sequence	15565-15594	6	0.8
NZ_ALTM01000016_1	1.8\|263983\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263983-264012	30	AP014166	Uncultured Mediterranean phage uvMED isolate uvMED-GF-C61-MedDCM-OCT-S46-C82, * SEQUENCING IN PROGRESS *	5438-5467	6	0.8
NZ_ALTM01000016_1	1.1\|263518\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263518-263547	30	NZ_CP015738	Shinella sp. HZN7 plasmid pShin-02, complete sequence	178708-178737	7	0.767
NZ_ALTM01000016_1	1.2\|263584\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263584-263613	30	NZ_CP046163	Vibrio sp. THAF191c plasmid pTHAF191c_b, complete sequence	1820533-1820562	7	0.767
NZ_ALTM01000016_1	1.2\|263584\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263584-263613	30	NZ_CP046066	Vibrio sp. THAF191d plasmid pTHAF191d_b, complete sequence	156125-156154	7	0.767
NZ_ALTM01000016_1	1.2\|263584\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263584-263613	30	NZ_CP045356	Vibrio sp. THAF64 plasmid pTHAF64_a, complete sequence	1604685-1604714	7	0.767
NZ_ALTM01000016_1	1.5\|263785\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263785-263814	30	NZ_CP028120	Escherichia coli O43 str. RM10042 plasmid pRM10042-1, complete sequence	45471-45500	7	0.767
NZ_ALTM01000016_1	1.5\|263785\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263785-263814	30	NZ_CP033633	Escherichia coli isolate ECCNB12-2 plasmid pTB-nb2, complete sequence	135584-135613	7	0.767
NZ_ALTM01000016_1	1.7\|263917\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263917-263946	30	MT778840	Rhizobium phage P11VFA, complete genome	28085-28114	7	0.767
NZ_ALTM01000016_1	1.7\|263917\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263917-263946	30	KF614509	Rhizobium phage vB_RleS_L338C, complete genome	63260-63289	7	0.767
NZ_ALTM01000016_1	1.7\|263917\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263917-263946	30	MF417890	Uncultured Caudovirales phage clone 7F_15, partial genome	31755-31784	7	0.767
NZ_ALTM01000016_1	1.7\|263917\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263917-263946	30	MF417953	Uncultured Caudovirales phage clone 7S_15, partial genome	5050-5079	7	0.767
NZ_ALTM01000016_1	1.7\|263917\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263917-263946	30	GU557055	Puniceispirillum phage HMO-2011, complete genome	33660-33689	7	0.767
NZ_ALTM01000016_1	1.8\|263983\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263983-264012	30	NZ_KR091915	Klebsiella pneumoniae strain KPC-DK05 plasmid pKPC-DK05, complete sequence	42923-42952	7	0.767
NZ_ALTM01000016_1	1.8\|263983\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263983-264012	30	NZ_CP025915	Escherichia coli strain 203740 plasmid p203740_35, complete sequence	8594-8623	7	0.767
NZ_ALTM01000016_1	1.8\|263983\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263983-264012	30	NZ_LS999564	Escherichia coli isolate EC-TO143 plasmid 5, complete sequence	682-711	7	0.767
NZ_ALTM01000016_1	1.8\|263983\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263983-264012	30	NZ_LN824136	Klebsiella pneumoniae genome assembly MS6671.v1, plasmid : _Plasmid_C_Kpneumoniae_MS6671	16675-16704	7	0.767
NZ_ALTM01000016_1	1.8\|263983\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263983-264012	30	NZ_CP054370	Escherichia coli strain SCU-115 plasmid pSCU-115-2, complete sequence	19258-19287	7	0.767
NZ_ALTM01000016_1	1.8\|263983\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263983-264012	30	NZ_CP006640	Escherichia coli PCN061 plasmid PCN061p4, complete sequence	5957-5986	7	0.767
NZ_ALTM01000016_1	1.8\|263983\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263983-264012	30	NZ_CP029801	Salmonella enterica subsp. enterica serovar Anatum strain R16.0676 plasmid pR16.0676_34k, complete sequence	7884-7913	7	0.767
NZ_ALTM01000016_1	1.8\|263983\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263983-264012	30	NZ_CP015505	Klebsiella pneumoniae strain SKGH01 plasmid unnamed 5, complete sequence	27842-27871	7	0.767
NZ_ALTM01000016_1	1.8\|263983\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263983-264012	30	NZ_CP026060	Proteus mirabilis strain FDAARGOS_80 plasmid unnamed1, complete sequence	16877-16906	7	0.767
NZ_ALTM01000016_1	1.8\|263983\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263983-264012	30	NZ_CP024853	Escherichia coli strain AR_0006 plasmid tig00000176, complete sequence	326-355	7	0.767
NZ_ALTM01000016_1	1.8\|263983\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263983-264012	30	NZ_LT985287	Escherichia coli strain RPC3 plasmid RCS69_pI, complete sequence	31253-31282	7	0.767
NZ_ALTM01000016_1	1.8\|263983\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263983-264012	30	NZ_CP028999	Klebsiella pneumoniae strain AR_0079 plasmid unnamed2, complete sequence	14730-14759	7	0.767
NZ_ALTM01000016_1	1.8\|263983\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263983-264012	30	NZ_CP027258	Escherichia coli strain EC11 plasmid unnamed3, complete sequence	21718-21747	7	0.767
NZ_ALTM01000016_1	1.8\|263983\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263983-264012	30	NZ_CP019200	Salmonella enterica subsp. enterica serovar Muenster str. 0315 plasmid pCFSAN001297_01, complete sequence	31777-31806	7	0.767
NZ_ALTM01000016_1	1.8\|263983\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263983-264012	30	NZ_CP023823	Escherichia coli strain 7/2 plasmid p7_2.3, complete sequence	16675-16704	7	0.767
NZ_ALTM01000016_1	1.8\|263983\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263983-264012	30	NZ_CP026025	Klebsiella pneumoniae strain 11420 plasmid p11420-KPC, complete sequence	33042-33071	7	0.767
NZ_ALTM01000016_1	1.8\|263983\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263983-264012	30	NZ_CP018988	Escherichia coli strain Ecol_AZ146 plasmid pECAZ146_3, complete sequence	682-711	7	0.767
NZ_ALTM01000016_1	1.8\|263983\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263983-264012	30	NZ_MK033500	Salmonella enterica subsp. enterica serovar Anatum strain R13.0957_pConj58k plasmid pConj58k, complete sequence	7491-7520	7	0.767
NZ_ALTM01000016_1	1.8\|263983\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263983-264012	30	NZ_MK033501	Salmonella enterica subsp. enterica serovar Anatum strain R13.0957_pConj83k plasmid pConj83k, complete sequence	55790-55819	7	0.767
NZ_ALTM01000016_1	1.8\|263983\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263983-264012	30	NZ_MK033499	Escherichia coli strain C600_pConj125k plasmid pConj125k, complete sequence	107898-107927	7	0.767
NZ_ALTM01000016_1	1.8\|263983\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263983-264012	30	MN693256	Marine virus AFVG_25M339, complete genome	27548-27577	7	0.767
NZ_ALTM01000016_1	1.8\|263983\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263983-264012	30	NZ_LR215001	Mycoplasma conjunctivae strain NCTC10147 plasmid 5	7233-7262	7	0.767
NZ_ALTM01000016_1	1.8\|263983\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263983-264012	30	MN855807	Siphoviridae sp. isolate 122, partial genome	13518-13547	7	0.767
NZ_ALTM01000016_1	1.8\|263983\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263983-264012	30	FJ429185	Lactococcus phage P087, complete genome	18714-18743	7	0.767
NZ_ALTM01000016_1	1.1\|263518\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263518-263547	30	LT960610	Bacillus phage SBSphiC genome assembly, complete genome: monopartite	9156-9185	8	0.733
NZ_ALTM01000016_1	1.5\|263785\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263785-263814	30	NC_014502	Gloeothece verrucosa PCC 7822 plasmid Cy782203, complete sequence	95768-95797	8	0.733
NZ_ALTM01000016_1	1.6\|263851\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263851-263880	30	NZ_CP017078	Novosphingobium resinovorum strain SA1 plasmid pSA3, complete sequence	316302-316331	8	0.733
NZ_ALTM01000016_1	1.6\|263851\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263851-263880	30	NZ_CP011121	Acetobacter oryzifermentans strain SLV-7 plasmid unnamed1, complete sequence	132628-132657	8	0.733
NZ_ALTM01000016_1	1.6\|263851\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263851-263880	30	NZ_CP023658	Acetobacter pomorum strain BDGP5 plasmid pApBDGP5A, complete sequence	64615-64644	8	0.733
NZ_ALTM01000016_1	1.6\|263851\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263851-263880	30	NZ_CP021923	Acetobacter pasteurianus subsp. pasteurianus strain SRCM101468 plasmid pAP1468-1	172609-172638	8	0.733
NZ_ALTM01000016_1	1.6\|263851\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263851-263880	30	NZ_CP030872	Acetobacter sp. JWB plasmid unnamed1, complete sequence	65463-65492	8	0.733
NZ_ALTM01000016_1	1.6\|263851\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263851-263880	30	NZ_CP021511	Acetobacter pasteurianus subsp. pasteurianus strain SRCM101342 plasmid pAP1342-2, complete sequence	167346-167375	8	0.733
NZ_ALTM01000016_1	1.6\|263851\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263851-263880	30	NZ_CP039847	Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-2, complete sequence	32668-32697	8	0.733
NZ_ALTM01000016_1	1.6\|263851\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263851-263880	30	NC_013211	Acetobacter pasteurianus IFO 3283-01 plasmid pAPA01-020, complete sequence	34069-34098	8	0.733
NZ_ALTM01000016_1	1.7\|263917\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263917-263946	30	NC_008201	Mannheimia phage phiMHaA1, complete genome	22041-22070	8	0.733
NZ_ALTM01000016_1	1.7\|263917\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263917-263946	30	DQ426905	Bacteriophage phi-MhaA1-BAA410, complete genome	22116-22145	8	0.733
NZ_ALTM01000016_1	1.7\|263917\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263917-263946	30	KP137432	Mannheimia phage vB_MhM_535AP1, complete genome	22081-22110	8	0.733
NZ_ALTM01000016_1	1.7\|263917\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263917-263946	30	JN255163	Mannheimia phage vB_MhM_1152AP, complete genome	22277-22306	8	0.733
NZ_ALTM01000016_1	1.7\|263917\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263917-263946	30	KP137438	Mannheimia phage vB_MhM_2256AP1, complete genome	22442-22471	8	0.733
NZ_ALTM01000016_1	1.7\|263917\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263917-263946	30	DQ426904	Bacteriophage phi-MhaA1-PHL101, complete genome	22041-22070	8	0.733
NZ_ALTM01000016_1	1.8\|263983\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263983-264012	30	NZ_CP039286	Leptospira interrogans strain FMAS_AW1 plasmid pLiSL3, complete sequence	70939-70968	8	0.733
NZ_ALTM01000016_1	1.8\|263983\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263983-264012	30	NZ_CP012103	Bacillus thuringiensis strain HS18-1 plasmid pHS18-4, complete sequence	20110-20139	8	0.733
NZ_ALTM01000016_1	1.8\|263983\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263983-264012	30	NZ_LR214953	Mycoplasma neurolyticum strain NCTC10166 plasmid 3	5510-5539	8	0.733
NZ_ALTM01000016_1	1.8\|263983\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263983-264012	30	NZ_CP009352	Francisella tularensis subsp. novicida F6168 plasmid unnamed, complete sequence	2297-2326	8	0.733
NZ_ALTM01000016_1	1.8\|263983\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263983-264012	30	NZ_CP051681	Cohnella sp. MFER-1 plasmid unnamed1	74376-74405	8	0.733
NZ_ALTM01000016_1	1.8\|263983\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263983-264012	30	NC_004952	Francisella novicida plasmid pFNL10, complete sequence	110-139	8	0.733
NZ_ALTM01000016_1	1.8\|263983\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263983-264012	30	NC_002109	Francisella tularensis plasmid pOM1, complete sequence	110-139	8	0.733
NZ_ALTM01000016_1	1.8\|263983\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263983-264012	30	LC494302	Escherichia phage SP27 DNA, complete genome	245480-245509	8	0.733
NZ_ALTM01000016_1	1.8\|263983\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263983-264012	30	MK817115	Escherichia phage vB_EcoM_phAPEC6, complete genome	230963-230992	8	0.733
NZ_ALTM01000016_1	1.8\|263983\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263983-264012	30	NC_027364	Escherichia phage PBECO 4, complete genome	39408-39437	8	0.733
NZ_ALTM01000016_1	1.8\|263983\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263983-264012	30	MH383160	Escherichia phage UB, complete genome	99995-100024	8	0.733
NZ_ALTM01000016_1	1.8\|263983\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263983-264012	30	MK327931	Escherichia phage vB_EcoM_G17, complete genome	256257-256286	8	0.733
NZ_ALTM01000016_1	1.8\|263983\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263983-264012	30	MN871445	UNVERIFIED: Serratia phage KpHz_2, complete genome	75797-75826	8	0.733
NZ_ALTM01000016_1	1.8\|263983\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263983-264012	30	MK448636	Streptococcus satellite phage Javan749, complete genome	10387-10416	8	0.733
NZ_ALTM01000016_1	1.8\|263983\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263983-264012	30	MN871444	UNVERIFIED: Serratia phage KpGz_1, complete genome	13324-13353	8	0.733
NZ_ALTM01000016_1	1.8\|263983\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263983-264012	30	MN693101	Marine virus AFVG_25M559, complete genome	25633-25662	8	0.733
NZ_ALTM01000016_1	1.8\|263983\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263983-264012	30	KT725776	Bacillus phage vB_BceS-MY192, partial genome	2349-2378	8	0.733
NZ_ALTM01000016_1	1.8\|263983\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263983-264012	30	LT603033	Escherichia phage vB_Eco_slurp01 genome assembly, chromosome: I	187103-187132	8	0.733
NZ_ALTM01000016_1	1.8\|263983\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263983-264012	30	KM507819	Escherichia phage 121Q, complete genome	246579-246608	8	0.733
NZ_ALTM01000016_1	1.8\|263983\|30\|NZ_ALTM01000016\|PILER-CR,CRISPRCasFinder,CRT	263983-264012	30	HQ683709	Planktothrix phage PaV-LD, complete genome	72162-72191	9	0.7

1. spacer 1.1|263518|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to MK448946 (Streptococcus phage Javan456, complete genome) position: , mismatch: 0, identity: 1.0

gaattaaaaagaaagttatcgcgactaaaa	CRISPR spacer
gaattaaaaagaaagttatcgcgactaaaa	Protospacer
******************************

2. spacer 1.1|263518|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to MK448975 (Streptococcus phage Javan526, complete genome) position: , mismatch: 0, identity: 1.0

gaattaaaaagaaagttatcgcgactaaaa	CRISPR spacer
gaattaaaaagaaagttatcgcgactaaaa	Protospacer
******************************

3. spacer 1.1|263518|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to MK448782 (Streptococcus phage Javan501, complete genome) position: , mismatch: 0, identity: 1.0

gaattaaaaagaaagttatcgcgactaaaa	CRISPR spacer
gaattaaaaagaaagttatcgcgactaaaa	Protospacer
******************************

4. spacer 1.1|263518|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to MK448675 (Streptococcus phage Javan129, complete genome) position: , mismatch: 1, identity: 0.967

gaattaaaaagaaagttatcgcgactaaaa	CRISPR spacer
gaattaaaaagaaagttatcgcaactaaaa	Protospacer
**********************.*******

5. spacer 1.1|263518|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to MK448858 (Streptococcus phage Javan166, complete genome) position: , mismatch: 1, identity: 0.967

gaattaaaaagaaagttatcgcgactaaaa	CRISPR spacer
gaattaaaaagaaagttatcgcaactaaaa	Protospacer
**********************.*******

6. spacer 1.1|263518|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to MK448775 (Streptococcus phage Javan489, complete genome) position: , mismatch: 1, identity: 0.967

gaattaaaaagaaagttatcgcgactaaaa	CRISPR spacer
gaattaaaaagaaagttatcgcaactaaaa	Protospacer
**********************.*******

7. spacer 1.1|263518|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to MK448944 (Streptococcus phage Javan452, complete genome) position: , mismatch: 1, identity: 0.967

gaattaaaaagaaagttatcgcgactaaaa	CRISPR spacer
gaattaaaaagaaagttatcgcaactaaaa	Protospacer
**********************.*******

8. spacer 1.1|263518|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to MK448850 (Streptococcus phage Javan132, complete genome) position: , mismatch: 1, identity: 0.967

gaattaaaaagaaagttatcgcgactaaaa	CRISPR spacer
gaattaaaaagaaagttatcgcaactaaaa	Protospacer
**********************.*******

9. spacer 1.1|263518|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to MK448683 (Streptococcus phage Javan149, complete genome) position: , mismatch: 1, identity: 0.967

gaattaaaaagaaagttatcgcgactaaaa	CRISPR spacer
gaattaaaaagaaagttatcgcaactaaaa	Protospacer
**********************.*******

10. spacer 1.4|263719|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to MK448796 (Streptococcus phage Javan53, complete genome) position: , mismatch: 2, identity: 0.933

gctggagattttacaagcagtttgaatttc	CRISPR spacer
gctggagattttacaagcagtttaaattcc	Protospacer
***********************.****.*

11. spacer 1.4|263719|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to MK448971 (Streptococcus phage Javan52, complete genome) position: , mismatch: 2, identity: 0.933

gctggagattttacaagcagtttgaatttc	CRISPR spacer
gttggagattttataagcagtttgaatttc	Protospacer
*.***********.****************

12. spacer 1.4|263719|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to MK448829 (Streptococcus phage Javan7, complete genome) position: , mismatch: 2, identity: 0.933

gctggagattttacaagcagtttgaatttc	CRISPR spacer
gctggagattttacaagcagtttaaattcc	Protospacer
***********************.****.*

13. spacer 1.4|263719|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to MK448956 (Streptococcus phage Javan48, complete genome) position: , mismatch: 2, identity: 0.933

gctggagattttacaagcagtttgaatttc	CRISPR spacer
gttggagattttataagcagtttgaatttc	Protospacer
*.***********.****************

14. spacer 1.4|263719|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to MH853355 (Streptococcus phage LF1, complete genome) position: , mismatch: 2, identity: 0.933

gctggagattttacaagcagtttgaatttc	CRISPR spacer
gctggagattttacaagcagtttaaattcc	Protospacer
***********************.****.*

15. spacer 1.4|263719|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to MH853358 (Streptococcus phage LF4, complete genome) position: , mismatch: 2, identity: 0.933

gctggagattttacaagcagtttgaatttc	CRISPR spacer
gctggagattttacaagcagtttaaattcc	Protospacer
***********************.****.*

16. spacer 1.4|263719|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to MK448837 (Streptococcus phage Javan10, complete genome) position: , mismatch: 3, identity: 0.9

gctggagattttacaagcagtttgaatttc	CRISPR spacer
gctggagattttataagcagtttaaattcc	Protospacer
*************.*********.****.*

17. spacer 1.4|263719|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to MK448742 (Streptococcus phage Javan37, complete genome) position: , mismatch: 3, identity: 0.9

gctggagattttacaagcagtttgaatttc	CRISPR spacer
gctggagattttataagcagtttaaattcc	Protospacer
*************.*********.****.*

18. spacer 1.4|263719|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to MK448851 (Streptococcus phage Javan14, complete genome) position: , mismatch: 3, identity: 0.9

gctggagattttacaagcagtttgaatttc	CRISPR spacer
gttggagattttataagcaatttgaatttc	Protospacer
*.***********.*****.**********

19. spacer 1.1|263518|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to MK448933 (Streptococcus phage Javan420, complete genome) position: , mismatch: 4, identity: 0.867

gaattaaaaagaaagttatcgcgactaaaa	CRISPR spacer
ggaataaaaagaaagttatagcaactaaaa	Protospacer
*.* *************** **.*******

20. spacer 1.4|263719|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to MK448749 (Streptococcus phage Javan39, complete genome) position: , mismatch: 4, identity: 0.867

gctggagattttacaagcagtttgaatttc	CRISPR spacer
gttggagattttataagcagtttaaattcc	Protospacer
*.***********.*********.****.*

21. spacer 1.4|263719|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to MH853356 (Streptococcus phage LF2, partial genome) position: , mismatch: 4, identity: 0.867

gctggagattttacaagcagtttgaatttc	CRISPR spacer
gttggagattttataagcagtttaaattcc	Protospacer
*.***********.*********.****.*

22. spacer 1.8|263983|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to KC465899 (Pelagibacter phage HTVC008M, complete genome) position: , mismatch: 4, identity: 0.867

-gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
tgaatat-aaagattttaaaaaagtagattt	Protospacer
 ***.** **************** * ****

23. spacer 1.6|263851|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to KY514264 (Pectobacterium phage vB_PatP_CB1, complete genome) position: , mismatch: 6, identity: 0.8

acgctctgaggcagatgaggaacaggcgca	CRISPR spacer
gaccgctgaggcagatgagcagcaggcgca	Protospacer
.  * ************** *.********

24. spacer 1.6|263851|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to NC_048704 (Pectobacterium phage Nepra, complete genome) position: , mismatch: 6, identity: 0.8

acgctctgaggcagatgaggaacaggcgca	CRISPR spacer
gaccgctgaggcagatgagcagcaggcgca	Protospacer
.  * ************** *.********

25. spacer 1.6|263851|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to KY514265 (Pectobacterium phage vB_PatP_CB3, complete genome) position: , mismatch: 6, identity: 0.8

acgctctgaggcagatgaggaacaggcgca	CRISPR spacer
gaccgctgaggcagatgagcagcaggcgca	Protospacer
.  * ************** *.********

26. spacer 1.8|263983|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP035396 (Bacillus subtilis strain SRCM103697 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.8

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
acacatgaatgattttaaaaaagaacttgg	Protospacer
. ******* **************** *

27. spacer 1.8|263983|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032856 (Bacillus subtilis subsp. subtilis strain PJ-7 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.8

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
acacatgaatgattttaaaaaagaacttgg	Protospacer
. ******* **************** *

28. spacer 1.8|263983|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MG557999 (Escherichia coli strain Eco-36682cz plasmid pEco-36682cz, complete sequence) position: , mismatch: 6, identity: 0.8

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
gggggtgaaagattttaaaaaagaaccttc	Protospacer
*.. .********************* **.

29. spacer 1.8|263983|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MF497781 (Citrobacter freundii strain Cfr-36049cz plasmid pCrf-36049cz, complete sequence) position: , mismatch: 6, identity: 0.8

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
gggggtgaaagattttaaaaaagaaccttc	Protospacer
*.. .********************* **.

30. spacer 1.8|263983|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to MT074138 (Bacteroides phage DAC17, complete genome) position: , mismatch: 6, identity: 0.8

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
aacaatgcaagactttaaaaaagaacatat	Protospacer
.*  *** ****.*************** *

31. spacer 1.8|263983|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to MT074136 (Bacteroides phage DAC15, complete genome) position: , mismatch: 6, identity: 0.8

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
aacaatgcaagactttaaaaaagaacatat	Protospacer
.*  *** ****.*************** *

32. spacer 1.8|263983|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046030 (Staphylococcus chromogenes strain 1401 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.8

gaacatgaaagattttaaaaaagaacattt---	CRISPR spacer
caccatgaaagattttagaaaag---atttagc	Protospacer
 * **************.*****   ****

33. spacer 1.8|263983|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to AP014166 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C61-MedDCM-OCT-S46-C82, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 6, identity: 0.8

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
taaagttaaagattctaaaaaagaagattt	Protospacer
 ** .* *******.********** ****

34. spacer 1.1|263518|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015738 (Shinella sp. HZN7 plasmid pShin-02, complete sequence) position: , mismatch: 7, identity: 0.767

gaattaaaaagaaagttatcgcgactaaaa	CRISPR spacer
cgttgacgaagaaagttttcgcgactaaaa	Protospacer
 . * * .********* ************

35. spacer 1.2|263584|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046163 (Vibrio sp. THAF191c plasmid pTHAF191c_b, complete sequence) position: , mismatch: 7, identity: 0.767

gatagaattgttactttggaaggggaactt	CRISPR spacer
tatagaattgtgactttggaagggaacacg	Protospacer
 ********** ************.*  .

36. spacer 1.2|263584|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046066 (Vibrio sp. THAF191d plasmid pTHAF191d_b, complete sequence) position: , mismatch: 7, identity: 0.767

gatagaattgttactttggaaggggaactt	CRISPR spacer
tatagaattgtgactttggaagggaacacg	Protospacer
 ********** ************.*  .

37. spacer 1.2|263584|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045356 (Vibrio sp. THAF64 plasmid pTHAF64_a, complete sequence) position: , mismatch: 7, identity: 0.767

gatagaattgttactttggaaggggaactt	CRISPR spacer
tatagaattgtgactttggaagggaacacg	Protospacer
 ********** ************.*  .

38. spacer 1.5|263785|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP028120 (Escherichia coli O43 str. RM10042 plasmid pRM10042-1, complete sequence) position: , mismatch: 7, identity: 0.767

tttaaagagatatctgtttcatcttgcgga	CRISPR spacer
cgggcagagatatctgtatcatattgcgga	Protospacer
.  . ************ **** *******

39. spacer 1.5|263785|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033633 (Escherichia coli isolate ECCNB12-2 plasmid pTB-nb2, complete sequence) position: , mismatch: 7, identity: 0.767

tttaaagagatatctgtttcatcttgcgga	CRISPR spacer
cgggcagagatatctgtatcatattgcgga	Protospacer
.  . ************ **** *******

40. spacer 1.7|263917|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to MT778840 (Rhizobium phage P11VFA, complete genome) position: , mismatch: 7, identity: 0.767

agtttcttgtgggttagcttgtccaccgta	CRISPR spacer
tcgttcttgtgggtgagcttgtccacgttg	Protospacer
   *********** ***********  *.

41. spacer 1.7|263917|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to KF614509 (Rhizobium phage vB_RleS_L338C, complete genome) position: , mismatch: 7, identity: 0.767

agtttcttgtgggttagcttgtccaccgta	CRISPR spacer
tcgttcttgtgggtgagcttgtccacgttg	Protospacer
   *********** ***********  *.

42. spacer 1.7|263917|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to MF417890 (Uncultured Caudovirales phage clone 7F_15, partial genome) position: , mismatch: 7, identity: 0.767

agtttcttgtgggttagcttgtccaccgta	CRISPR spacer
tgcttgttgtggcttagcttgtccactttg	Protospacer
 *.** ****** *************. *.

43. spacer 1.7|263917|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to MF417953 (Uncultured Caudovirales phage clone 7S_15, partial genome) position: , mismatch: 7, identity: 0.767

agtttcttgtgggttagcttgtccaccgta	CRISPR spacer
tgcttgttgtggcttagcttgtccactttg	Protospacer
 *.** ****** *************. *.

44. spacer 1.7|263917|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to GU557055 (Puniceispirillum phage HMO-2011, complete genome) position: , mismatch: 7, identity: 0.767

agtttcttgtgggttagcttgtccaccgta	CRISPR spacer
tcttaccaatgggttagattgtccaccgta	Protospacer
  ** *. .******** ************

45. spacer 1.8|263983|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KR091915 (Klebsiella pneumoniae strain KPC-DK05 plasmid pKPC-DK05, complete sequence) position: , mismatch: 7, identity: 0.767

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
gggggtgaaagatttcaaaaaagaaccttc	Protospacer
*.. .**********.********** **.

46. spacer 1.8|263983|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025915 (Escherichia coli strain 203740 plasmid p203740_35, complete sequence) position: , mismatch: 7, identity: 0.767

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
gggggtgaaagatttcaaaaaagaaccttc	Protospacer
*.. .**********.********** **.

47. spacer 1.8|263983|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LS999564 (Escherichia coli isolate EC-TO143 plasmid 5, complete sequence) position: , mismatch: 7, identity: 0.767

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
gggggtgaaagatttcaaaaaagaaccttc	Protospacer
*.. .**********.********** **.

48. spacer 1.8|263983|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LN824136 (Klebsiella pneumoniae genome assembly MS6671.v1, plasmid : _Plasmid_C_Kpneumoniae_MS6671) position: , mismatch: 7, identity: 0.767

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
gggggtgaaagatttcaaaaaagaaccttc	Protospacer
*.. .**********.********** **.

49. spacer 1.8|263983|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054370 (Escherichia coli strain SCU-115 plasmid pSCU-115-2, complete sequence) position: , mismatch: 7, identity: 0.767

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
gggggtgaaagatttcaaaaaagaaccttc	Protospacer
*.. .**********.********** **.

50. spacer 1.8|263983|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP006640 (Escherichia coli PCN061 plasmid PCN061p4, complete sequence) position: , mismatch: 7, identity: 0.767

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
gggggtgaaagatttcaaaaaagaaccttc	Protospacer
*.. .**********.********** **.

51. spacer 1.8|263983|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029801 (Salmonella enterica subsp. enterica serovar Anatum strain R16.0676 plasmid pR16.0676_34k, complete sequence) position: , mismatch: 7, identity: 0.767

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
gggggtgaaagatttcaaaaaagaaccttc	Protospacer
*.. .**********.********** **.

52. spacer 1.8|263983|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015505 (Klebsiella pneumoniae strain SKGH01 plasmid unnamed 5, complete sequence) position: , mismatch: 7, identity: 0.767

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
gggggtgaaagatttcaaaaaagaaccttc	Protospacer
*.. .**********.********** **.

53. spacer 1.8|263983|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026060 (Proteus mirabilis strain FDAARGOS_80 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
gggggtgaaagatttcaaaaaagaaccttc	Protospacer
*.. .**********.********** **.

54. spacer 1.8|263983|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024853 (Escherichia coli strain AR_0006 plasmid tig00000176, complete sequence) position: , mismatch: 7, identity: 0.767

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
gggggtgaaagatttcaaaaaagaaccttc	Protospacer
*.. .**********.********** **.

55. spacer 1.8|263983|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LT985287 (Escherichia coli strain RPC3 plasmid RCS69_pI, complete sequence) position: , mismatch: 7, identity: 0.767

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
gggggtgaaagatttcaaaaaagaaccttc	Protospacer
*.. .**********.********** **.

56. spacer 1.8|263983|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP028999 (Klebsiella pneumoniae strain AR_0079 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.767

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
gggggtgaaagatttcaaaaaagaaccttc	Protospacer
*.. .**********.********** **.

57. spacer 1.8|263983|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027258 (Escherichia coli strain EC11 plasmid unnamed3, complete sequence) position: , mismatch: 7, identity: 0.767

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
gggggtgaaagatttcaaaaaagaaccttc	Protospacer
*.. .**********.********** **.

58. spacer 1.8|263983|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019200 (Salmonella enterica subsp. enterica serovar Muenster str. 0315 plasmid pCFSAN001297_01, complete sequence) position: , mismatch: 7, identity: 0.767

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
gggggtgaaagatttcaaaaaagaaccttc	Protospacer
*.. .**********.********** **.

59. spacer 1.8|263983|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023823 (Escherichia coli strain 7/2 plasmid p7_2.3, complete sequence) position: , mismatch: 7, identity: 0.767

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
gggggtgaaagatttcaaaaaagaaccttc	Protospacer
*.. .**********.********** **.

60. spacer 1.8|263983|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026025 (Klebsiella pneumoniae strain 11420 plasmid p11420-KPC, complete sequence) position: , mismatch: 7, identity: 0.767

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
gggggtgaaagatttcaaaaaagaaccttc	Protospacer
*.. .**********.********** **.

61. spacer 1.8|263983|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018988 (Escherichia coli strain Ecol_AZ146 plasmid pECAZ146_3, complete sequence) position: , mismatch: 7, identity: 0.767

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
gggggtgaaagatttcaaaaaagaaccttc	Protospacer
*.. .**********.********** **.

62. spacer 1.8|263983|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MK033500 (Salmonella enterica subsp. enterica serovar Anatum strain R13.0957_pConj58k plasmid pConj58k, complete sequence) position: , mismatch: 7, identity: 0.767

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
gggggtgaaagatttcaaaaaagaaccttc	Protospacer
*.. .**********.********** **.

63. spacer 1.8|263983|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MK033501 (Salmonella enterica subsp. enterica serovar Anatum strain R13.0957_pConj83k plasmid pConj83k, complete sequence) position: , mismatch: 7, identity: 0.767

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
gggggtgaaagatttcaaaaaagaaccttc	Protospacer
*.. .**********.********** **.

64. spacer 1.8|263983|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MK033499 (Escherichia coli strain C600_pConj125k plasmid pConj125k, complete sequence) position: , mismatch: 7, identity: 0.767

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
gggggtgaaagatttcaaaaaagaaccttc	Protospacer
*.. .**********.********** **.

65. spacer 1.8|263983|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to MN693256 (Marine virus AFVG_25M339, complete genome) position: , mismatch: 7, identity: 0.767

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
cagcatgaaagatttaaaaaaagaagaaga	Protospacer
 *.************ ********* *

66. spacer 1.8|263983|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR215001 (Mycoplasma conjunctivae strain NCTC10147 plasmid 5) position: , mismatch: 7, identity: 0.767

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
ggaagataaaaattttaaaaaagagcattt	Protospacer
*.* .  ***.*************.*****

67. spacer 1.8|263983|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to MN855807 (Siphoviridae sp. isolate 122, partial genome) position: , mismatch: 7, identity: 0.767

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
caccatgaaagatattaaaaaagattacta	Protospacer
 * ********** ********** .*.*

68. spacer 1.8|263983|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to FJ429185 (Lactococcus phage P087, complete genome) position: , mismatch: 7, identity: 0.767

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
caccatgaaagatattaaaaaagattacta	Protospacer
 * ********** ********** .*.*

69. spacer 1.1|263518|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to LT960610 (Bacillus phage SBSphiC genome assembly, complete genome: monopartite) position: , mismatch: 8, identity: 0.733

gaattaaaaagaaagttatcgcgactaaaa	CRISPR spacer
ttatgaaaaagaaagttatcgcgttaacac	Protospacer
  ** ****************** . * *

70. spacer 1.5|263785|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to NC_014502 (Gloeothece verrucosa PCC 7822 plasmid Cy782203, complete sequence) position: , mismatch: 8, identity: 0.733

tttaaagagatatctgtttcatcttgcgga	CRISPR spacer
tttaaaaagatatcggtttcatcgagaaac	Protospacer
******.******* ********  * ..

71. spacer 1.6|263851|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017078 (Novosphingobium resinovorum strain SA1 plasmid pSA3, complete sequence) position: , mismatch: 8, identity: 0.733

acgctctgaggcagatgaggaacaggcgca	CRISPR spacer
gccgcgtggggcagatgacgaacaggcgct	Protospacer
.*  . **.********* **********

72. spacer 1.6|263851|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011121 (Acetobacter oryzifermentans strain SLV-7 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733

acgctctgaggcagatgaggaacaggcgca	CRISPR spacer
aatttgagaagcagatgaggaacaggcgtg	Protospacer
*  .*  **.******************..

73. spacer 1.6|263851|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023658 (Acetobacter pomorum strain BDGP5 plasmid pApBDGP5A, complete sequence) position: , mismatch: 8, identity: 0.733

acgctctgaggcagatgaggaacaggcgca	CRISPR spacer
aatttgagaagcagatgaggaacaggcgtg	Protospacer
*  .*  **.******************..

74. spacer 1.6|263851|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021923 (Acetobacter pasteurianus subsp. pasteurianus strain SRCM101468 plasmid pAP1468-1) position: , mismatch: 8, identity: 0.733

acgctctgaggcagatgaggaacaggcgca	CRISPR spacer
aatttgagaagcagatgaggaacaggcgtg	Protospacer
*  .*  **.******************..

75. spacer 1.6|263851|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030872 (Acetobacter sp. JWB plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733

acgctctgaggcagatgaggaacaggcgca	CRISPR spacer
aatttgagaagcagatgaggaacaggcgtg	Protospacer
*  .*  **.******************..

76. spacer 1.6|263851|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021511 (Acetobacter pasteurianus subsp. pasteurianus strain SRCM101342 plasmid pAP1342-2, complete sequence) position: , mismatch: 8, identity: 0.733

acgctctgaggcagatgaggaacaggcgca	CRISPR spacer
aatttgagaagcagatgaggaacaggcgtg	Protospacer
*  .*  **.******************..

77. spacer 1.6|263851|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039847 (Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-2, complete sequence) position: , mismatch: 8, identity: 0.733

acgctctgaggcagatgaggaacaggcgca	CRISPR spacer
aatttgagaagcagatgaggaacaggcgtg	Protospacer
*  .*  **.******************..

78. spacer 1.6|263851|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to NC_013211 (Acetobacter pasteurianus IFO 3283-01 plasmid pAPA01-020, complete sequence) position: , mismatch: 8, identity: 0.733

acgctctgaggcagatgaggaacaggcgca	CRISPR spacer
aatttgagaagcagatgaggaacaggcgtg	Protospacer
*  .*  **.******************..

79. spacer 1.7|263917|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to NC_008201 (Mannheimia phage phiMHaA1, complete genome) position: , mismatch: 8, identity: 0.733

agtttcttgtgggttagcttgtccaccgta	CRISPR spacer
gggccatcgtgggttagctcgtccaccgtg	Protospacer
.* .. *.***********.*********.

80. spacer 1.7|263917|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to DQ426905 (Bacteriophage phi-MhaA1-BAA410, complete genome) position: , mismatch: 8, identity: 0.733

agtttcttgtgggttagcttgtccaccgta	CRISPR spacer
gggccatcgtgggttagctcgtccaccgtg	Protospacer
.* .. *.***********.*********.

81. spacer 1.7|263917|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to KP137432 (Mannheimia phage vB_MhM_535AP1, complete genome) position: , mismatch: 8, identity: 0.733

agtttcttgtgggttagcttgtccaccgta	CRISPR spacer
gggccatcgtgggttagctcgtccaccgtg	Protospacer
.* .. *.***********.*********.

82. spacer 1.7|263917|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to JN255163 (Mannheimia phage vB_MhM_1152AP, complete genome) position: , mismatch: 8, identity: 0.733

agtttcttgtgggttagcttgtccaccgta	CRISPR spacer
gggccatcgtgggttagctcgtccaccgtg	Protospacer
.* .. *.***********.*********.

83. spacer 1.7|263917|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to KP137438 (Mannheimia phage vB_MhM_2256AP1, complete genome) position: , mismatch: 8, identity: 0.733

agtttcttgtgggttagcttgtccaccgta	CRISPR spacer
gggccatcgtgggttagctcgtccaccgtg	Protospacer
.* .. *.***********.*********.

84. spacer 1.7|263917|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to DQ426904 (Bacteriophage phi-MhaA1-PHL101, complete genome) position: , mismatch: 8, identity: 0.733

agtttcttgtgggttagcttgtccaccgta	CRISPR spacer
gggccatcgtgggttagctcgtccaccgtg	Protospacer
.* .. *.***********.*********.

85. spacer 1.8|263983|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039286 (Leptospira interrogans strain FMAS_AW1 plasmid pLiSL3, complete sequence) position: , mismatch: 8, identity: 0.733

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
tatactagtagaatttaaaaaagaacattt	Protospacer
 *   *.. *** *****************

86. spacer 1.8|263983|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012103 (Bacillus thuringiensis strain HS18-1 plasmid pHS18-4, complete sequence) position: , mismatch: 8, identity: 0.733

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
aaacatcaaagattttaaaaaatgaggtcg	Protospacer
.***** *************** .* .*.

87. spacer 1.8|263983|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR214953 (Mycoplasma neurolyticum strain NCTC10166 plasmid 3) position: , mismatch: 8, identity: 0.733

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
aattgataaaaattttaaaaaacaacattt	Protospacer
.* ..  ***.*********** *******

88. spacer 1.8|263983|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009352 (Francisella tularensis subsp. novicida F6168 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.733

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
ttgcatgaacgattttaaaaaagagaatag	Protospacer
  .****** **************. **

89. spacer 1.8|263983|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP051681 (Cohnella sp. MFER-1 plasmid unnamed1) position: , mismatch: 8, identity: 0.733

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
tcacatgaacgattttgaaaaagaaacggt	Protospacer
  ******* ******.********    *

90. spacer 1.8|263983|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to NC_004952 (Francisella novicida plasmid pFNL10, complete sequence) position: , mismatch: 8, identity: 0.733

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
ttgcatgaacgattttaaaaaagagaatag	Protospacer
  .****** **************. **

91. spacer 1.8|263983|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to NC_002109 (Francisella tularensis plasmid pOM1, complete sequence) position: , mismatch: 8, identity: 0.733

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
ttgcatgaacgattttaaaaaagagaatag	Protospacer
  .****** **************. **

92. spacer 1.8|263983|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to LC494302 (Escherichia phage SP27 DNA, complete genome) position: , mismatch: 8, identity: 0.733

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
tcatatgaaagctttgaaaaaagaacagaa	Protospacer
  *.******* *** ***********

93. spacer 1.8|263983|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to MK817115 (Escherichia phage vB_EcoM_phAPEC6, complete genome) position: , mismatch: 8, identity: 0.733

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
tcatatgaaagctttgaaaaaagaacagaa	Protospacer
  *.******* *** ***********

94. spacer 1.8|263983|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to NC_027364 (Escherichia phage PBECO 4, complete genome) position: , mismatch: 8, identity: 0.733

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
tcatatgaaagctttgaaaaaagaacagaa	Protospacer
  *.******* *** ***********

95. spacer 1.8|263983|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to MH383160 (Escherichia phage UB, complete genome) position: , mismatch: 8, identity: 0.733

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
tcatatgaaagctttgaaaaaagaacagaa	Protospacer
  *.******* *** ***********

96. spacer 1.8|263983|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to MK327931 (Escherichia phage vB_EcoM_G17, complete genome) position: , mismatch: 8, identity: 0.733

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
tcatatgaaagctttgaaaaaagaacagaa	Protospacer
  *.******* *** ***********

97. spacer 1.8|263983|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to MN871445 (UNVERIFIED: Serratia phage KpHz_2, complete genome) position: , mismatch: 8, identity: 0.733

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
attcctcttagatttaaaaaaagaacattt	Protospacer
.  * *   ****** **************

98. spacer 1.8|263983|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to MK448636 (Streptococcus satellite phage Javan749, complete genome) position: , mismatch: 8, identity: 0.733

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
gtttataaaagattttaaaaaagaaatcta	Protospacer
*  .**.******************  .*

99. spacer 1.8|263983|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to MN871444 (UNVERIFIED: Serratia phage KpGz_1, complete genome) position: , mismatch: 8, identity: 0.733

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
attcctcttagatttaaaaaaagaacattt	Protospacer
.  * *   ****** **************

100. spacer 1.8|263983|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to MN693101 (Marine virus AFVG_25M559, complete genome) position: , mismatch: 8, identity: 0.733

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
aagagtagaagaatttaaaaaagaacattg	Protospacer
.*. .*..**** ****************

101. spacer 1.8|263983|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to KT725776 (Bacillus phage vB_BceS-MY192, partial genome) position: , mismatch: 8, identity: 0.733

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
gtggatgattgattttaaaaaagaacaagg	Protospacer
* . ****  *****************

102. spacer 1.8|263983|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to LT603033 (Escherichia phage vB_Eco_slurp01 genome assembly, chromosome: I) position: , mismatch: 8, identity: 0.733

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
tcatatgaaagctttgaaaaaagaacagaa	Protospacer
  *.******* *** ***********

103. spacer 1.8|263983|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to KM507819 (Escherichia phage 121Q, complete genome) position: , mismatch: 8, identity: 0.733

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
tcatatgaaagctttgaaaaaagaacagaa	Protospacer
  *.******* *** ***********

104. spacer 1.8|263983|30|NZ_ALTM01000016|PILER-CR,CRISPRCasFinder,CRT matches to HQ683709 (Planktothrix phage PaV-LD, complete genome) position: , mismatch: 9, identity: 0.7

gaacatgaaagattttaaaaaagaacattt	CRISPR spacer
ccacatgacagattttaacaaagaattggc	Protospacer
  ****** ********* ******.   .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

347189 : 356573

uncultured_Caudovirales_phage(28.57%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000120355.1\|347189_347891_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	9.2e-35	39.9
WP_000246600.1\|348027_350148_-	type I DNA topoisomerase	E3T4K4	Cafeteria_roenbergensis_virus	1.4e-102	37.7
WP_001015250.1\|350242_351085_-	DNA-protecting protein DprA	S6BFL3	Thermus_phage	8.5e-27	35.8
WP_000162771.1\|351222_352251_-	siderophore ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_000614751.1\|352312_353074_-	ATP-binding cassette domain-containing protein	Q9EMR9	Amsacta_moorei_entomopoxvirus	1.7e-18	28.6
WP_000588576.1\|353070_354045_-	iron chelate uptake ABC transporter family permease subunit	A0A2H4IY97	uncultured_Caudovirales_phage	3.6e-05	21.2
WP_000735588.1\|354041_355004_-	iron chelate uptake ABC transporter family permease subunit	A0A2H4IY97	uncultured_Caudovirales_phage	3.3e-83	50.3
WP_000136509.1\|355242_355791_-	sugar O-acetyltransferase	NA	NA	NA	NA
WP_000201088.1\|355811_356573_-	ribonuclease HII	D2TEQ2	Emiliania_huxleyi_virus	1.5e-25	40.7

DBSCAN-SWA_2

409234 : 418225

Bacillus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000222544.1\|409234_410953_+	phospho-sugar mutase	A0A1X9I671	Streptococcus_phage	1.4e-278	84.8
WP_000746859.1\|411016_411214_-	hypothetical protein	NA	NA	NA	NA
WP_000647638.1\|411227_412961_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	5.1e-50	31.0
WP_000826946.1\|412961_414683_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	2.8e-40	26.7
WP_000472259.1\|414694_415297_-	lysozyme family protein	A0A223LKM8	Bacillus_phage	1.1e-20	40.1
WP_000968655.1\|415298_416276_-	nucleoid-associated protein	NA	NA	NA	NA
WP_000575540.1\|416280_417537_-	serine hydroxymethyltransferase	A0A240F3L3	Aeromonas_phage	1.3e-92	51.7
WP_000998735.1\|417628_418225_-	threonylcarbamoyl-AMP synthase	A0A291ATS8	Pandoravirus	1.1e-15	29.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_ALTM01000002

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr_ID: NZ_ALTM01000002.1|WP_000384271.1|15417_15744_-|hypothetical-protein

Click the colored protein region to show detailed information

Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_ALTM01000002.1|WP_000384271.1|15417_15744_-|hypothetical-protein

15417_15744_-

108 aa aa

AcrIIA21

hit_Aca_id	identity	query_coverage	hit_coverage
anti_CRISPR3639\|WP_000384271.1\|AcrIIA21\|II-A\|Verified\|Streptococcus	1.0	1	1.0

4. NZ_ALTM01000006

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

3550 : 11108

Streptococcus_phage(50.0%)

transposase,integrase

attL 6484:6497|attR 11976:11989

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000353149.1\|3550_4207_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.2e-22	31.8
WP_000594360.1\|4216_5494_-	ABC transporter permease	NA	NA	NA	NA
WP_079261184.1\|6239_6401_+	TM2 domain-containing protein	NA	NA	NA	NA
6484:6497	attL	NA	NA	NA	NA
WP_001867107.1\|6573_6783_-\|transposase	transposase	NA	NA	NA	NA
WP_001865698.1\|6908_7169_-\|transposase	IS3 family transposase	A0A0C5AEA5	Paenibacillus_phage	3.4e-11	43.0
WP_001122304.1\|7190_7391_-\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_000640620.1\|7552_7957_-	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	1.3e-20	43.6
WP_001872365.1\|7956_8223_+	hypothetical protein	Q77YW7	Streptococcus_phage	9.2e-20	65.2
WP_071659971.1\|8225_8840_+\|integrase	site-specific integrase	F8HGP4	Streptococcus_phage	9.2e-55	60.7
WP_001068667.1\|8984_9332_-	50S ribosomal protein L19	NA	NA	NA	NA
WP_000595708.1\|9911_11108_-	voltage-gated chloride channel family protein	A0A1X9I5Z9	Streptococcus_phage	4.6e-103	54.5
11976:11989	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

5. NZ_ALTM01000013

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

42519 : 50506

Synechococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000783409.1\|42519_43824_-	LysM peptidoglycan-binding domain-containing protein	A0A0E3XB61	Gordonia_phage	9.2e-12	34.2
WP_001045908.1\|43970_44870_-	peptidoglycan DD-metalloendopeptidase family protein	A0A221J6U0	Arthrobacter_phage	4.1e-19	45.9
WP_000197236.1\|45062_46613_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	E3SNU8	Prochlorococcus_phage	4.4e-45	52.4
WP_000183891.1\|46631_47252_-	hypothetical protein	NA	NA	NA	NA
WP_000686116.1\|47270_47834_-	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	1.8e-25	35.6
WP_001291337.1\|48001_49024_-	phosphoribosylformylglycinamidine cyclo-ligase	R9TMC7	Synechococcus_phage	1.2e-62	42.4
WP_000220683.1\|49051_50506_-	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	1.4e-53	32.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

6. NZ_ALTM01000010

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

77296 : 84500

uncultured_Caudovirales_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001042655.1\|77296_78001_-	transglycosylase SLT domain-containing protein	A0A2H4J6C5	uncultured_Caudovirales_phage	4.2e-27	56.6
WP_000029066.1\|78106_78646_-	LysM peptidoglycan-binding domain-containing protein	A0A249XZV3	Enterococcus_phage	5.8e-21	42.2
WP_000359358.1\|78861_79656_-	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA
WP_000510606.1\|79648_80491_-	energy-coupling factor transporter ATPase	W6JKT0	Anomala_cuprea_entomopoxvirus	2.5e-18	25.5
WP_000181757.1\|80466_81306_-	energy-coupling factor transporter ATPase	G9BWD6	Planktothrix_phage	3.5e-20	30.0
WP_000976003.1\|81305_81848_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA
WP_000217754.1\|81970_83254_-	insulinase family protein	A0A2K9V7S4	Bandra_megavirus	1.3e-21	33.3
WP_000706188.1\|83255_84500_-	insulinase family protein	A0A1X9I714	Streptococcus_phage	3.7e-87	41.3

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage