CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_ALTZ01000001	Streptococcus agalactiae GB00864 ctg7180000005665, whole genome shotgun sequence	0 crisprs	NA	0	0	0
NZ_ALTZ01000029	Streptococcus agalactiae GB00864 ctg7180000005693, whole genome shotgun sequence	0 crisprs	NA	0	0	0
NZ_ALTZ01000037	Streptococcus agalactiae GB00864 ctg7180000005701, whole genome shotgun sequence	0 crisprs	NA	0	0	0
NZ_ALTZ01000015	Streptococcus agalactiae GB00864 ctg7180000005679, whole genome shotgun sequence	0 crisprs	NA	0	0	0
NZ_ALTZ01000018	Streptococcus agalactiae GB00864 ctg7180000005682, whole genome shotgun sequence	0 crisprs	NA	0	1	0
NZ_ALTZ01000031	Streptococcus agalactiae GB00864 ctg7180000005695, whole genome shotgun sequence	0 crisprs	NA	0	0	0
NZ_ALTZ01000038	Streptococcus agalactiae GB00864 ctg7180000005702, whole genome shotgun sequence	0 crisprs	NA	0	0	0
NZ_ALTZ01000035	Streptococcus agalactiae GB00864 ctg7180000005699, whole genome shotgun sequence	0 crisprs	NA	0	0	0
NZ_ALTZ01000030	Streptococcus agalactiae GB00864 ctg7180000005694, whole genome shotgun sequence	0 crisprs	NA	0	0	0
NZ_ALTZ01000013	Streptococcus agalactiae GB00864 ctg7180000005677, whole genome shotgun sequence	0 crisprs	NA	0	0	0
NZ_ALTZ01000032	Streptococcus agalactiae GB00864 ctg7180000005696, whole genome shotgun sequence	0 crisprs	NA	0	0	0
NZ_ALTZ01000009	Streptococcus agalactiae GB00864 ctg7180000005673, whole genome shotgun sequence	1 crisprs	cas2,cas1,cas4,cas7,cas8c,cas3	0	0	0
NZ_ALTZ01000016	Streptococcus agalactiae GB00864 ctg7180000005680, whole genome shotgun sequence	0 crisprs	NA	0	0	1
NZ_ALTZ01000012	Streptococcus agalactiae GB00864 ctg7180000005676, whole genome shotgun sequence	0 crisprs	NA	0	0	0
NZ_ALTZ01000034	Streptococcus agalactiae GB00864 ctg7180000005698, whole genome shotgun sequence	0 crisprs	NA	0	0	0
NZ_ALTZ01000019	Streptococcus agalactiae GB00864 ctg7180000005683, whole genome shotgun sequence	0 crisprs	cas3	0	0	0
NZ_ALTZ01000017	Streptococcus agalactiae GB00864 ctg7180000005681, whole genome shotgun sequence	0 crisprs	NA	0	0	0
NZ_ALTZ01000027	Streptococcus agalactiae GB00864 ctg7180000005691, whole genome shotgun sequence	0 crisprs	NA	0	0	0
NZ_ALTZ01000026	Streptococcus agalactiae GB00864 ctg7180000005690, whole genome shotgun sequence	0 crisprs	NA	0	0	0
NZ_ALTZ01000007	Streptococcus agalactiae GB00864 ctg7180000005671, whole genome shotgun sequence	0 crisprs	NA	0	0	0
NZ_ALTZ01000022	Streptococcus agalactiae GB00864 ctg7180000005686, whole genome shotgun sequence	0 crisprs	cas3	0	0	0
NZ_ALTZ01000028	Streptococcus agalactiae GB00864 ctg7180000005692, whole genome shotgun sequence	0 crisprs	NA	0	1	0
NZ_ALTZ01000003	Streptococcus agalactiae GB00864 ctg7180000005667, whole genome shotgun sequence	0 crisprs	NA	0	0	0
NZ_ALTZ01000002	Streptococcus agalactiae GB00864 ctg7180000005666, whole genome shotgun sequence	0 crisprs	NA	0	0	0
NZ_ALTZ01000020	Streptococcus agalactiae GB00864 ctg7180000005684, whole genome shotgun sequence	0 crisprs	NA	0	0	0
NZ_ALTZ01000036	Streptococcus agalactiae GB00864 ctg7180000005700, whole genome shotgun sequence	0 crisprs	DEDDh,WYL	0	0	0
NZ_ALTZ01000011	Streptococcus agalactiae GB00864 ctg7180000005675, whole genome shotgun sequence	0 crisprs	NA	0	0	0
NZ_ALTZ01000004	Streptococcus agalactiae GB00864 ctg7180000005668, whole genome shotgun sequence	0 crisprs	NA	0	1	0
NZ_ALTZ01000008	Streptococcus agalactiae GB00864 ctg7180000005672, whole genome shotgun sequence	0 crisprs	NA	0	1	0
NZ_ALTZ01000021	Streptococcus agalactiae GB00864 ctg7180000005685, whole genome shotgun sequence	0 crisprs	NA	0	0	0
NZ_ALTZ01000033	Streptococcus agalactiae GB00864 ctg7180000005697, whole genome shotgun sequence	0 crisprs	NA	0	1	0
NZ_ALTZ01000039	Streptococcus agalactiae GB00864 ctg7180000005703, whole genome shotgun sequence	0 crisprs	csm6	0	1	0
NZ_ALTZ01000006	Streptococcus agalactiae GB00864 ctg7180000005670, whole genome shotgun sequence	0 crisprs	NA	0	0	0
NZ_ALTZ01000025	Streptococcus agalactiae GB00864 ctg7180000005689, whole genome shotgun sequence	0 crisprs	NA	0	0	0
NZ_ALTZ01000010	Streptococcus agalactiae GB00864 ctg7180000005674, whole genome shotgun sequence	0 crisprs	DinG	0	1	0
NZ_ALTZ01000023	Streptococcus agalactiae GB00864 ctg7180000005687, whole genome shotgun sequence	1 crisprs	csn2,cas2,cas1,cas9	6	0	0
NZ_ALTZ01000014	Streptococcus agalactiae GB00864 ctg7180000005678, whole genome shotgun sequence	0 crisprs	DEDDh	0	0	0
NZ_ALTZ01000024	Streptococcus agalactiae GB00864 ctg7180000005688, whole genome shotgun sequence	0 crisprs	DEDDh	0	0	0
NZ_ALTZ01000005	Streptococcus agalactiae GB00864 ctg7180000005669, whole genome shotgun sequence	0 crisprs	NA	0	0	0

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

11613 : 18817

uncultured_Caudovirales_phage(16.67%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001042661.1\|11613_12318_-	transglycosylase SLT domain-containing protein	A0A2H4J6C5	uncultured_Caudovirales_phage	3.2e-27	56.6
WP_000029067.1\|12423_12963_-	LysM peptidoglycan-binding domain-containing protein	A0A249XZV3	Enterococcus_phage	3.0e-17	46.4
WP_000359358.1\|13178_13973_-	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA
WP_000510606.1\|13965_14808_-	energy-coupling factor transporter ATPase	W6JKT0	Anomala_cuprea_entomopoxvirus	2.5e-18	25.5
WP_000181757.1\|14783_15623_-	energy-coupling factor transporter ATPase	G9BWD6	Planktothrix_phage	3.5e-20	30.0
WP_000239224.1\|15622_16165_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA
WP_000217765.1\|16287_17571_-	insulinase family protein	A0A2K9V7S4	Bandra_megavirus	1.6e-21	33.3
WP_000706190.1\|17572_18817_-	insulinase family protein	A0A1X9I714	Streptococcus_phage	1.7e-87	41.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_ALTZ01000039

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

97983 : 106971

Bacillus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000222544.1\|97983_99702_+	phospho-sugar mutase	A0A1X9I671	Streptococcus_phage	1.4e-278	84.8
WP_000746856.1\|99765_99963_-	hypothetical protein	NA	NA	NA	NA
WP_000647647.1\|99976_101710_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	1.0e-50	31.2
WP_000826945.1\|101710_103429_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	2.8e-40	26.7
WP_000472259.1\|103440_104043_-	lysozyme family protein	A0A223LKM8	Bacillus_phage	1.1e-20	40.1
WP_000968655.1\|104044_105022_-	nucleoid-associated protein	NA	NA	NA	NA
WP_000575546.1\|105026_106283_-	serine hydroxymethyltransferase	A0A240F3L3	Aeromonas_phage	7.8e-93	51.7
WP_000998734.1\|106374_106971_-	threonylcarbamoyl-AMP synthase	A0A291ATS8	Pandoravirus	3.7e-16	29.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_ALTZ01000009

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_ALTZ01000009_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_ALTZ01000009_1

62258-62355

TypeI

I-C

Consensus_repeat	Method
ATTTCAATCCACGCACCCGCAAAGGGTGCGAC	CRISPRCasFinder

1 spacers

cas2,cas1,cas4,cas7,cas8c,cas3

The CRISPR arrays of NZ_ALTZ01000009_1

>merge|NZ_ALTZ01000009|1|62258-62355|CRISPRCasFinder
ATTTCAATCCACGCACCCGCAAAGGGTGCGACTTTTCCGTTTTTTCATAGCAATATGTGGGACTATATTTCAATCCACGCACCCGCAAAGGGTGCGAC

>NZ_ALTZ01000009|1|1|62258-62355|CRISPRCasFinder
ATTTCAATCCACGCACCCGCAAAGGGTGCGAC	TTTTCCGTTTTTTCATAGCAATATGTGGGACTAT
ATTTCAATCCACGCACCCGCAAAGGGTGCGAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_ALTZ01000009.1\|WP_000592256.1\|57201_57651_+\|thiol-reductase-thioredoxin	unknown	unknown	gnl\|CDD\|273542
NZ_ALTZ01000009.1\|WP_000748011.1\|57695_58688_-\|aspartate--ammonia-ligase	unknown	unknown	gnl\|CDD\|225304
NZ_ALTZ01000009.1\|WP_000790647.1\|54684_55758_-\|PDZ-domain-containing-protein	unknown	unknown	gnl\|CDD\|226011
NZ_ALTZ01000009.1\|WP_000137511.1\|53275_54610_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|277323
NZ_ALTZ01000009.1\|WP_000345444.1\|65353_67249_-\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	cas8c	cd09642_cas8c_CAS-I-C	gnl\|CDD\|187773
NZ_ALTZ01000009.1\|WP_153308112.1\|71521_72327_-\|IS5-family-transposase	unknown	unknown	gnl\|CDD\|372577
NZ_ALTZ01000009.1\|WP_001224502.1\|52627_53206_-\|DUF1027-domain-containing-protein	unknown	unknown	gnl\|CDD\|226876
NZ_ALTZ01000009.1\|WP_088186201.1\|63827_64472_-\|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl\|CDD\|224385
NZ_ALTZ01000009.1\|WP_000049316.1\|61097_62057_-\|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223745
NZ_ALTZ01000009.1\|WP_000735207.1\|62805_63831_-\|type-I-C-CRISPR-associated-endonuclease-Cas1	cas1	cd09721_cas1_CAS-I-C	gnl\|CDD\|188360
NZ_ALTZ01000009.1\|WP_000384889.1\|56229_56520_-\|hypothetical-protein	unknown	unknown	unknown
NZ_ALTZ01000009.1\|WP_001266830.1\|56531_57071_-\|16S-rRNA-(guanine(966)-N(2))-methyltransferase-RsmD	unknown	unknown	gnl\|CDD\|367574
NZ_ALTZ01000009.1\|WP_000988351.1\|68110_70534_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_ALTZ01000009.1\|WP_000161892.1\|55747_56233_-\|pantetheine-phosphate-adenylyltransferase	unknown	unknown	gnl\|CDD\|173914
NZ_ALTZ01000009.1\|WP_000989528.1\|62501_62795_-\|CRISPR-associated-endonuclease-Cas2	cas2	COG1343_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|187856
NZ_ALTZ01000009.1\|WP_000889456.1\|64500_65349_-\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	cas7	COG3649_cas7_CAS-I-C	gnl\|CDD\|226175
NZ_ALTZ01000009.1\|WP_000021305.1\|58800_59865_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225197

Protein	Function_ID	Function_description	E-value
NZ_ALTZ01000009.1\|WP_000592256.1\|57201_57651_+\|thiol-reductase-thioredoxin	gnl\|CDD\|273542	TIGR01295, Pediocin_PA-1_biosynthesis_protein_PedC, bacteriocin transport accessory protein, putative. This model describes a small family of proteins believed to aid in the export of various class II bacteriocins, which are ribosomally-synthesized, non-lantibiotic bacterial peptide antibiotics. Members of this family are found in operons for pediocin PA-1 from Pediococcus acidilactici and brochocin-C from Brochothrix campestris.	2.96539e-08
NZ_ALTZ01000009.1\|WP_000748011.1\|57695_58688_-\|aspartate--ammonia-ligase	gnl\|CDD\|225304	COG2502, AsnA, Asparagine synthetase A [Amino acid transport and metabolism].	0
NZ_ALTZ01000009.1\|WP_000790647.1\|54684_55758_-\|PDZ-domain-containing-protein	gnl\|CDD\|226011	COG3480, SdrC, Predicted secreted protein containing a PDZ domain [Signal transduction mechanisms].	1.28781e-135
NZ_ALTZ01000009.1\|WP_000137511.1\|53275_54610_-\|hypothetical-protein	gnl\|CDD\|277323	cd00845, MPP_UshA_N_like, Escherichia coli UshA-like family, N-terminal metallophosphatase domain. This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.	7.10499e-59
NZ_ALTZ01000009.1\|WP_000345444.1\|65353_67249_-\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	gnl\|CDD\|187773	cd09642, Cas8c_I-C, CRISPR/Cas system-associated protein Cas8c. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins, some contain Zn-finger domain; signature gene for I-C subtype; also known as Csd1 family.	0
NZ_ALTZ01000009.1\|WP_153308112.1\|71521_72327_-\|IS5-family-transposase	gnl\|CDD\|372577	pfam13359, DDE_Tnp_4, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	3.43214e-22
NZ_ALTZ01000009.1\|WP_001224502.1\|52627_53206_-\|DUF1027-domain-containing-protein	gnl\|CDD\|226876	COG4470, COG4470, Uncharacterized protein conserved in bacteria [Function unknown].	7.03077e-49
NZ_ALTZ01000009.1\|WP_088186201.1\|63827_64472_-\|CRISPR-associated-protein-Cas4	gnl\|CDD\|224385	COG1468, COG1468, CRISPR-associated protein Cas4 (RecB family exonuclease) [Defense mechanisms].	5.19253e-30
NZ_ALTZ01000009.1\|WP_000049316.1\|61097_62057_-\|Gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	1.72879e-57
NZ_ALTZ01000009.1\|WP_000735207.1\|62805_63831_-\|type-I-C-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|188360	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the DVULG subtype of CRISPR/Cas system.	5.95494e-174
NZ_ALTZ01000009.1\|WP_000161892.1\|55747_56233_-\|pantetheine-phosphate-adenylyltransferase	gnl\|CDD\|173914	cd02163, PPAT, Phosphopantetheine adenylyltransferase. Phosphopantetheine adenylyltransferase (PPAT). PPAT is an essential enzyme in bacteria, responsible for catalyzing the rate-limiting step in coenzyme A (CoA) biosynthesis. The dinucleotide-binding fold of PPAT is homologous to class I aminoacyl-tRNA synthetases. CoA has been shown to inhibit PPAT and competes with ATP, PhP, and dPCoA. PPAT is a homohexamer in E. coli.	9.07742e-77
NZ_ALTZ01000009.1\|WP_001266830.1\|56531_57071_-\|16S-rRNA-(guanine(966)-N(2))-methyltransferase-RsmD	gnl\|CDD\|367574	pfam03602, Cons_hypoth95, Conserved hypothetical protein 95.	9.30355e-83
NZ_ALTZ01000009.1\|WP_000988351.1\|68110_70534_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	1.11439e-155
NZ_ALTZ01000009.1\|WP_000989528.1\|62501_62795_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	3.98207e-31
NZ_ALTZ01000009.1\|WP_000889456.1\|64500_65349_-\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	gnl\|CDD\|226175	COG3649, COG3649, CRISPR system related protein [Defense mechanisms].	5.09634e-156
NZ_ALTZ01000009.1\|WP_000021305.1\|58800_59865_-\|hypothetical-protein	gnl\|CDD\|225197	COG2315, MmcQ, Uncharacterized protein conserved in bacteria [Function unknown].	1.01714e-19

>NZ_ALTZ01000009.1|WP_000049316.1|61097_62057_-|Gfo/Idh/MocA-family-oxidoreductase
MSKVRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSRTLESAQAFANKYHLPKAYDKLEDMLADESIDVIYVATINQDHYKVAKAALLAGKHVLVEKPFTLTYDQANELFALAESCNLFLMEAQKSVFIPMTQVIKKLLASGEIGEVISISSTTAYPNIDHVTWFRELELGGGTVHFMAPYALSYLQYLFDATITHASGTATFPKGQSDSQSKLLLQLSNGVLVDIFLTTRLNLPHEMIIYGTEGRLIIPHFWKTTHAKLVRNDTSAQTIQVDMVSDFEKEAYHVSQMILEGQRVSHIMTPQLTLSGVKIIEDLYRSWGK
>NZ_ALTZ01000009.1|WP_000021305.1|58800_59865_-|hypothetical-protein
MSIESDFFRKKRFIFSSLEEFGFIKSDQEYIYCQTFMDNDFKAIITISLDGKIAGKVIDSALEEEYLPLRAANYNGSFVGEVRSAYMAILGDISDSCCKDLLFTKDQSNRLAEKIAKTFEDSVDYPFAKHPQYASYRVSGKWYALLFPLKMGKLENVPAQLSEDEVEVLNIKVNPQDMEILLQKEGIYPSYHMSKKTWVSIVLDNTLSDIEIFKLVSDSRKLVSPNKKSNSEPEFWIIPANPKFYDIDKEFAEHQLIDWTQKGKIAVGDYVFIYITAPIRALRYVCQVIERDLKTSTYLGARDVKAYMRLKLIRQFEDSTYPVAFLAEHGVKTVRGPRRMTKELRQVMAKTILE
>NZ_ALTZ01000009.1|WP_000748011.1|57695_58688_-|aspartate--ammonia-ligase
MKKSFIHQQQEISFVKNTFTQYLIDKLEIVEVQGPILSQVGDGMQDNLSGIEHPVSVKVLNIPEAEFEVVHSLAKWKRHTLARFGFNEGEGLFVHMKALRPDEDSLDPTHSVYVDQWDWEKVIPDGRRNLDYLKETVEKIYKAIRLTELAVEARFDIESILPKRITFIHTEELVEKYPDLSPKERENAIAKEYGAVFLIGIGGELADGKPHDGRAPDYDDWTTPSENGFKGLNGDILVWNEQLGTAFELSSMGIRVDEDALKRQVVLTGDEDRLEFEWHKTLLRGFFPLTIGGGIGQSRLAMFLLRKKHIGEVQSSVWPKEVRDTFENIL
>NZ_ALTZ01000009.1|WP_000592256.1|57201_57651_+|thiol-reductase-thioredoxin
MIKKLLLSLIAILCLTTLKSNLSSADTMTISPQQYQHMITNSDLIAITDKALVSKSQQSEATIFIGRPTCQYCRAFLPKLLKSQATLHSKIYYLDSQKYKGERLKSFFKKHHITTVPNLAHYQRGKMTKYLVQGSQATPQQIQTFLSQK
>NZ_ALTZ01000009.1|WP_001266830.1|56531_57071_-|16S-rRNA-(guanine(966)-N(2))-methyltransferase-RsmD
MRVVAGTFGGRPLKTLDGKTTRPTTDKVKGAIFNMIGPFFEGGRVLDLFSGSGSLAIEAISRGMDQAVLVEKDRRAQVVIQENIAMTKSPEQFQLLKMEANRALEQLTGQFDLVLLDPPYAKEEIVKQIQIMDSKGLLGDDIMIVCETDKSVDLPEEIASFGIWKQKIYGISKVTVYVR
>NZ_ALTZ01000009.1|WP_000384889.1|56229_56520_-|hypothetical-protein
MDYKLVMIILILVILIYLLLRLHYLEELLKHYHFKNDEGVCSLSRTKNPLYLLMAMITFLPNLINWIANGFEAIDIVRLIPVVVFLWLYYCGDDDE
>NZ_ALTZ01000009.1|WP_000161892.1|55747_56233_-|pantetheine-phosphate-adenylyltransferase
MTKKALFTGSFDPVTNGHLDIIERASYLFDHVYIGLFYNLEKQGYFSIECRKKMLEEAIRQFKNVSVLVAQDRLAVDLAREVGAKYFVRGLRNSQDFDYEANLEFFNKQLADDIETVYLSTSPSLSPISSSRIRELIHFKASVKPFVPKSVVREVEKMSEE
>NZ_ALTZ01000009.1|WP_000790647.1|54684_55758_-|PDZ-domain-containing-protein
MKNKDPKRKHKSLLGLLKWWIIGFAFLLLVLASLVVRLPYYLEMPGGAYDIRSVLKVNKKADKAKGSYNFVAVSVSQATPAQVFYAWLTPFTELSSKEETTGGFSNDDYLRINQFYMETSQNESVYQALKLANKQVSLTYKGVYVLNLAKNSTFKDRLHLADTVTGVNGKSFKNSSQLIKYVAALHLGDKVKVQYTSQGKKKESVGKVIKLSNGKNGIGIGLTDHTEVSSDVPVDFNTEGVGGPSAGLMFTLAIYDQLVKEDLRKGRKIAGTGTIEQNGHVGDIGGAGLKVVSAAKKGMDIFFVPNNPIDKNAKKGKTKVQTNYQEAKAAAKRLGTKMKIVPVQNVQQAIDYLKKTK
>NZ_ALTZ01000009.1|WP_000137511.1|53275_54610_-|hypothetical-protein
MTELIRILHLNDLHSHFENFPKVKRFFHDNQAQPIETISLDLGDNIDKSHPLTEASSGKANIQLMNELGIELATIGNNEGVGLSKKDLDQVYKDSDFTVIVGNLKDNTIEPSWAKPYIIYETQQGTKLAFLAYTFPYYKTYEPHGWMIEDPIDCLKCHLQINEIKEANCRILMSHLGIRFDTRIAQEFSEIDLIIGAHTHHLFEEGELINGTYLAAAGKYGRFVGSIDITFDNHTLKDILISTCDTKQLTGYPSDSDWAKKIESEGKEQLRKESLISFPAPLSLEESCQLVMDAMLFYAGADVAIINSGLIVQPFRKDFSRKNLHESLPHQMRLAKLTVSSQELLEIYETIYQQGQFLAQQKIHGMGFRGKYFGDVLHSGFDYKNGKIVYNEKDIDAKEEVILVIVDQYYFASYFECLKTKKVDLLFPELLRDVVADYLINMTL
>NZ_ALTZ01000009.1|WP_001224502.1|52627_53206_-|DUF1027-domain-containing-protein
MRKEVTPEMLNYNKYPGPQFIHFENIVKSDDIEFQLVINEKSAFDVTVFGQRFSEILLKYDFIVGDWGNEQLRLRGFYKDASTIRKNSRISRLEDYIKEYCNFGCAYFVLENPNPRDIKFDDERPHKRRKSRSKSQSSKSQTRNNRSQSNANAHFTSKKRKETKRRQERHIKEEQDKEMTSAKQHFVIRKKK
>NZ_ALTZ01000009.1|WP_000989528.1|62501_62795_-|CRISPR-associated-endonuclease-Cas2
MMVLVTYDVNTKTVAGRRRLRHVAKLCVDYGQRVQNSVFECSVTPAEFVEIKNELLTIIDQKSDSIRFYLLGKNWQNRVETIGKNDSYDPDIGVLLL
>NZ_ALTZ01000009.1|WP_000735207.1|62805_63831_-|type-I-C-CRISPR-associated-endonuclease-Cas1
MKKLLNTLYLTQDNFYLTRERDNIVIKQEGKIVHRFPYRIIDGIICFSYLGASPSLIELCTEKQINLSFHTPQGRFCGRFVGSTNGNVLLRREHYRLADHALSIEYAKRFILAKVSNSRKYLIRFKRDHRDRIDIQLFEDINTELMWALELIQSAPDKETLLGIEGQAANQYFRAFNELVLTDKDTFRFNGRTRRPPQDCINALMSLGYSLLTYECQSALEAVGLDSYVGFYHTDRPGRASLALDLVEEFRSYIVDRFVFSLVNKGQLNKRHFDIKENSSVILTEKGRTIFIESWQKRKHTVVEHPFTKEKVKLMLLPYVQAQLLSKAIRGDLESYPPFLI
>NZ_ALTZ01000009.1|WP_088186201.1|63827_64472_-|CRISPR-associated-protein-Cas4
MLSGIQHFQFCKRQWALIHIEQQWLDNEATAHGQILHTKADNPYIKGKRKDFLVSRAMHVSSKILGLYGILDVVEFYKDENGFSLKGKRGKWLPCIVEYKRGKPKKDRRDIVQLVAQTICLEETFGCYIEKGCLYYHSVNQKKTIEITEELRQEVLDLAEQMHFYYDNKIIGKAEYFKNCPLCSLVDICKPRLSKKTRNVDNYIRQSLVNEDSL
>NZ_ALTZ01000009.1|WP_000889456.1|64500_65349_-|type-I-C-CRISPR-associated-protein-Cas7/Csd2
MLEHKIDFIVTFEVKEANANGDPLNGNMPRTDAKGYGVMSDVSIKRKIRNRLQDMGKPIFVQANERIEDDFRSLEKRFSQHFTAKTPDKEIEEKANALWFDVRAFGQVFTYLKKSIGVRGPISISMAKSLEPIVISSLQITRSTNGMEAKNNSGRSSDTMGTKHFVDYGIYVLKGSINAYFAEKTGFSQEDAEAIKEVLVSLFENDASSARPEGSMRVREVFWFTHSSKLGNVSSARVFDLLEYNQSIEEKSTYDAYQIHLNQEKLAKYEAKGLTVKILEGL
>NZ_ALTZ01000009.1|WP_000345444.1|65353_67249_-|type-I-C-CRISPR-associated-protein-Cas8c/Csd1
MDFFTSLLKTYEKAELADLVDHQKRNNEPVLLPIYHTSLKSNGKNIISVKLDKDGQFHKAEFMTDKQMIIFPVTADSVARSGSNPAPHPLVDKFAYYSAEMGQSQYDSFHKQLNNWIDYCEEGDVKRFLTIVQQFILKPEFLTLILDSLIGPDYQNNQLKVTFCDATGKEKLIDLSACFLEFSIDQFQGFKNESVSTFKTLHQSYISFVEANRENLGICNISGREEQLTDKHRGLMGNAKIISVSNKREAYKGRFREREDVFSVGYETSEKIHLMIKYLLENKNTSTWLGSSQYLINWFSDDLTNDSRLDIVSPIFDDGLEEDDDEDMPSVIALATEENKRIGKSFIKGQKLFANDATYYIAILNKTSNGRIALKYFRQIQASQLLTNLDKWQEKYSWESRSKSGKSRLRTPAFHDILNVSYGVDRDRFLELDNDNFKSDQVQKLVTSLIDGKPMPQSIVKKLGNNVKERHRYRKHWYQVEQVCLAILHKQNGEEFSPMLNHTNQNRSYLFGRLLAIFELIETLRYSLEGNGSDRITNAERYWTAYTGQPTKLMMLLENKIKPYEETLKLNRRGSWKKLEKEKEEILELLNPLLETETMEKPLDYRFIFGYYAEKNYYYPKQNTEVTESEE
>NZ_ALTZ01000009.1|WP_000988351.1|68110_70534_-|CRISPR-associated-helicase/endonuclease-Cas3
MMTKETLAHYQKKIEQESEKKQSLDEHLWHVACFSRQEASIIGQGDVLFLISLYHDLGKADRAFQDKLLNNPNRHVDHSYAGAKYLCSIIGPHLKSRGVDKDERMTFNEMVGYVISAHHGMYDFCYCSDDAEYYSFNKFKNRINRDLDDYHYHEDIKGYAIKLEEKLCDYGYKDLRELIDKAFDNYQQAMSSLNWQDNSEWDYYQSCMVRLYLSLLKNADILDTVNAYGLEISPMDKTERSSLKHSYLAAIEQKYASFGRPNNQLNTIRTEIAERVKERGKRDSKGIYRLDLPTGAGKTNLSMRYAFHQLVHQDKSRFFYITPFLSVLEQNASEIRKVTGDLGVLEHHSNMVKQANEDDDKDSLLSAYLIDSWDSQVVLTSMVQFFQTLFKTKSANLRRFSSLINSVVILDEVQSLPIEVTTLFNLTMNFLNKVMDTTIVLCTATQPAYDSSEIDHRICYGGNLGELAEIVELTIEEKQIFSRTELRKFDDSDQKVYLTDVINLILGEENSVLAIFNTKKTVHNCYTMLKDMTDRPIYQLSTNMCAQHRLDLVAKIKTELQNNTPIICISTQLIEAGVDVDFHRVIRSYSGIDSIVQAAGRCNREGKRDKGQVTLVNLTNEEENISRLTEIKAKKEATESILYKIGSPINISTLNRDFFEYYYANNQGLMDYPLEDNISIYDYLSLNTYQTANKKFKGKLKQAFKTAGAKMNLINNDMIGILVPYGDAEKKLAYLEELGTSHFLSAEDYQTIKSLLKELQPFTVNVRENDPLLEATKSYLNGQILVLTSEYYDTERGVKYDSASFYF
>NZ_ALTZ01000009.1|WP_153308112.1|71521_72327_-|IS5-family-transposase
MNYEASKQLTDVRFKRLVGVQRTTFEEMLAVLKTAYQRKHAKGGRTPKLSLEDLLMATLQYMREYRTYEQIAADFGIHESNLIRRSQWVESTLIQSGFTISKTHLSAEDTVIVDATEVKINRPKKQLANYSGKKKCHAMKAQAIVTSQGRIVSLDIAVNYCHDMKLFKMSRRNIGQAAKILADSGYHGIMKMNSQAQTPRKSSKLKPLTLEDKTYNHTLSKERIKVENIFAKVKTFKIFSTTYRNRRKRFGLRMNLIAGMINRELGF

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

4. NZ_ALTZ01000004

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

61969 : 72241

Streptococcus_phage(57.14%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000638895.1\|61969_63115_-	cysteine desulfurase	A0A1X6WFP1	Pacmanvirus	9.5e-29	28.4
WP_000033715.1\|63361_63814_+	hypothetical protein	NA	NA	NA	NA
WP_000043884.1\|63856_65206_-	glutathione-disulfide reductase	A0A2K5B2C5	Erysipelothrix_phage	1.3e-32	25.5
WP_000024621.1\|65380_65716_-	YlbF/YmcA family competence regulator	A0A1X9I5Y8	Streptococcus_phage	8.9e-20	39.4
WP_001269901.1\|65799_66966_-	chorismate synthase	A0A291AU41	Pandoravirus	9.3e-40	34.1
WP_001195733.1\|66966_68034_-	3-dehydroquinate synthase	NA	NA	NA	NA
WP_000707048.1\|68127_68805_-	type I 3-dehydroquinate dehydratase	W6LP76	Streptococcus_phage	5.3e-88	68.4
WP_001037600.1\|68804_69962_-	class I SAM-dependent rRNA methyltransferase	W6LLI2	Streptococcus_phage	4.6e-140	66.0
WP_000721261.1\|70096_72241_+	LTA synthase family protein	W6LM83	Streptococcus_phage	6.3e-260	67.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

5. NZ_ALTZ01000010

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

3733 : 11287

Streptococcus_phage(50.0%)

integrase,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000353149.1\|3733_4390_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.2e-22	31.8
WP_000594360.1\|4399_5677_-	ABC transporter permease	NA	NA	NA	NA
WP_000508795.1\|6418_6580_+	TM2 domain-containing protein	NA	NA	NA	NA
WP_001867107.1\|6752_6962_-\|transposase	transposase	NA	NA	NA	NA
WP_001872364.1\|7087_7345_-\|transposase	IS3 family transposase	A0A0C5AEA5	Paenibacillus_phage	5.8e-11	43.5
WP_001122304.1\|7369_7570_-\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_000640620.1\|7731_8136_-	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	1.3e-20	43.6
WP_001872365.1\|8135_8402_+	hypothetical protein	Q77YW7	Streptococcus_phage	9.2e-20	65.2
WP_071659971.1\|8404_9019_+\|integrase	site-specific integrase	F8HGP4	Streptococcus_phage	9.2e-55	60.7
WP_001068667.1\|9163_9511_-	50S ribosomal protein L19	NA	NA	NA	NA
WP_000595708.1\|10090_11287_-	voltage-gated chloride channel family protein	A0A1X9I5Z9	Streptococcus_phage	4.6e-103	54.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

6. NZ_ALTZ01000018

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1635 : 10125

Streptococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000715592.1\|1635_2271_+	dTMP kinase	M1PSC7	Streptococcus_phage	2.8e-67	61.1
WP_000364565.1\|2290_3154_+	DNA polymerase III subunit delta'	M1NSC1	Streptococcus_phage	7.3e-74	49.7
WP_000358198.1\|3183_3510_+	DNA replication initiation control protein YabA	M1PFV3	Streptococcus_phage	3.2e-30	61.1
WP_001866320.1\|3515_4379_+	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	M1PLC5	Streptococcus_phage	3.7e-110	70.4
WP_011058366.1\|4354_4516_-	hypothetical protein	NA	NA	NA	NA
WP_011058365.1\|4500_4605_+	hypothetical protein	NA	NA	NA	NA
WP_000603277.1\|4648_5284_-	copper homeostasis protein CutC	NA	NA	NA	NA
WP_001167085.1\|6576_7125_+	acetyltransferase	M1PSC3	Streptococcus_phage	1.1e-54	58.4
WP_000232156.1\|7187_8369_+	phosphoglycerate dehydrogenase	M1NSB9	Streptococcus_phage	7.0e-168	75.6
WP_000966772.1\|8423_8900_+	methylated-DNA--[protein]-cysteine S-methyltransferase	M1PFU9	Streptococcus_phage	7.1e-39	50.9
WP_000287944.1\|8901_9258_+	arsenate reductase family protein	M1PLC0	Streptococcus_phage	1.5e-41	71.8
WP_000767484.1\|9297_10125_-	exodeoxyribonuclease III	M1PSC0	Streptococcus_phage	4.3e-124	78.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

7. NZ_ALTZ01000023

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_ALTZ01000023_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_ALTZ01000023_1

21870-22367

TypeII

II-A

Consensus_repeat	Method
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	CRT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	PILER-CR
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	CRISPRCasFinder

7 spacers

csn2,cas2,cas1,cas9

The CRISPR arrays of NZ_ALTZ01000023_1

>merge|NZ_ALTZ01000023|1|21870-22367|CRT,PILER-CR,CRISPRCasFinder
TGATGTCCTAGCATAATAACAGCACAGCTCTAAAACCTAGTATCAGATTTATATTTAAAAGCTAGAGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACAAGTACTCCATCCAAAAATTAGCTCGCAAAGGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACTTAGACCTTGTAAAAAGTTCCCTAACGCAGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACGAAATGGTTTCAACAATGTTTGATAATCAAGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACGGATTTTTATTGTCGACTGCTTTATTAAAAGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACACAAGATAATTTAGTAATTTAGGAAAATATGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACTCCTCACGACGGATAAAGCGTAAAAGATCTGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC

>NZ_ALTZ01000023|1|1|21870-22367|CRT
TGATGTCCTAGCATAATAACAGCACAGCTCTAAAAC	CTAGTATCAGATTTATATTTAAAAGCTAGA
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	AAGTACTCCATCCAAAAATTAGCTCGCAAAG
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TTAGACCTTGTAAAAAGTTCCCTAACGCA
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	GAAATGGTTTCAACAATGTTTGATAATCAA
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	GGATTTTTATTGTCGACTGCTTTATTAAAA
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	ACAAGATAATTTAGTAATTTAGGAAAATAT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TCCTCACGACGGATAAAGCGTAAAAGATCT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC

>NZ_ALTZ01000023|1|1|21936-22367|PILER-CR
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	AAGTACTCCATCCAAAAATTAGCTCGCAAAG
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TTAGACCTTGTAAAAAGTTCCCTAACGCA
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	GAAATGGTTTCAACAATGTTTGATAATCAA
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	GGATTTTTATTGTCGACTGCTTTATTAAAA
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	ACAAGATAATTTAGTAATTTAGGAAAATAT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TCCTCACGACGGATAAAGCGTAAAAGATCT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC

>NZ_ALTZ01000023|1|1|21936-22367|CRISPRCasFinder
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	AAGTACTCCATCCAAAAATTAGCTCGCAAAG
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TTAGACCTTGTAAAAAGTTCCCTAACGCA
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	GAAATGGTTTCAACAATGTTTGATAATCAA
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	GGATTTTTATTGTCGACTGCTTTATTAAAA
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	ACAAGATAATTTAGTAATTTAGGAAAATAT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TCCTCACGACGGATAAAGCGTAAAAGATCT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_ALTZ01000023.1\|WP_000914664.1\|30986_32117_-\|oxygen-independent-coproporphyrinogen-III-oxidase	unknown	unknown	gnl\|CDD\|236309
NZ_ALTZ01000023.1\|WP_000180007.1\|15289_15949_-\|HD-domain-containing-protein	unknown	unknown	gnl\|CDD\|224336
NZ_ALTZ01000023.1\|WP_001040083.1\|24328_28441_-\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	COG3513_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|273840
NZ_ALTZ01000023.1\|WP_001241816.1\|32208_32589_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|131381
NZ_ALTZ01000023.1\|WP_000146566.1\|9576_10215_+\|CatB-related-O-acetyltransferase	unknown	unknown	gnl\|CDD\|100040
NZ_ALTZ01000023.1\|WP_000438314.1\|20895_21312_-\|nucleoside-diphosphate-kinase	unknown	unknown	gnl\|CDD\|179085
NZ_ALTZ01000023.1\|WP_000929489.1\|23457_24327_-\|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|274694
NZ_ALTZ01000023.1\|WP_000590706.1\|22467_23133_-\|type-II-A-CRISPR-associated-protein-Csn2	csn2	pfam09711_csn2_CAS-II-A	gnl\|CDD\|213408
NZ_ALTZ01000023.1\|WP_000159234.1\|32613_32985_-\|YbgA-family-protein	unknown	unknown	gnl\|CDD\|377982
NZ_ALTZ01000023.1\|WP_000653357.1\|28828_29485_-\|TIGR01906-family-membrane-protein	unknown	unknown	gnl\|CDD\|226884
NZ_ALTZ01000023.1\|WP_000665410.1\|14382_14817_-\|peptide-methionine-(R)-S-oxide-reductase-MsrB	unknown	unknown	gnl\|CDD\|234692
NZ_ALTZ01000023.1\|WP_011058334.1\|21444_21615_-\|hypothetical-protein	unknown	unknown	unknown
NZ_ALTZ01000023.1\|WP_000168898.1\|11438_14231_-\|cation-transporting-P-type-ATPase	unknown	unknown	gnl\|CDD\|223550
NZ_ALTZ01000023.1\|WP_001019133.1\|18927_20760_-\|elongation-factor-4	unknown	unknown	gnl\|CDD\|235462
NZ_ALTZ01000023.1\|WP_000523795.1\|30245_30983_-\|acyl-ACP-thioesterase	unknown	unknown	gnl\|CDD\|366738
NZ_ALTZ01000023.1\|WP_000065321.1\|10335_11439_-\|DUF2974-domain-containing-protein	unknown	unknown	gnl\|CDD\|371412
NZ_ALTZ01000023.1\|WP_000122194.1\|23119_23461_-\|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226043
NZ_ALTZ01000023.1\|WP_000323544.1\|29474_30245_-\|TIGR01457-family-HAD-type-hydrolase	unknown	unknown	gnl\|CDD\|319832
NZ_ALTZ01000023.1\|WP_029662154.1\|16048_18667_-\|pneumococcal-type-histidine-triad-protein	unknown	unknown	gnl\|CDD\|380193
NZ_ALTZ01000023.1\|WP_000621142.1\|14816_15281_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181

Protein	Function_ID	Function_description	E-value
NZ_ALTZ01000023.1\|WP_000914664.1\|30986_32117_-\|oxygen-independent-coproporphyrinogen-III-oxidase	gnl\|CDD\|236309	PRK08599, PRK08599, oxygen-independent coproporphyrinogen III oxidase.	0
NZ_ALTZ01000023.1\|WP_000180007.1\|15289_15949_-\|HD-domain-containing-protein	gnl\|CDD\|224336	COG1418, COG1418, Predicted HD superfamily hydrolase [General function prediction only].	2.66997e-33
NZ_ALTZ01000023.1\|WP_001040083.1\|24328_28441_-\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	gnl\|CDD\|273840	TIGR01865, conserved_hypothetical_protein, CRISPR subtype II/NMENI RNA-guided endonuclease Cas9/Csn1. CRISPR loci appear to be mobile elements with a wide host range. This model represents a protein found only in CRISPR-containing species, near other CRISPR-associated proteins (cas), as part of the NMENI subtype of CRISPR/Cas locus. The species range so far for this protein is animal pathogens and commensals only.	0
NZ_ALTZ01000023.1\|WP_001241816.1\|32208_32589_-\|hypothetical-protein	gnl\|CDD\|131381	TIGR02328, TIGR02328, conserved hypothetical protein. Members of this protein are found in a small number of taxonomically well separated species, yet are strongly conserved, suggesting lateral gene transfer. Members are found in Treponema denticola, Clostridium acetobutylicum, and several of the Firmicutes. The function of this protein is unknown. [Hypothetical proteins, Conserved].	6.45558e-80
NZ_ALTZ01000023.1\|WP_000146566.1\|9576_10215_+\|CatB-related-O-acetyltransferase	gnl\|CDD\|100040	cd03349, LbH_XAT, Xenobiotic acyltransferase (XAT): The XAT class of hexapeptide acyltransferases is composed of a large number of microbial enzymes that catalyze the CoA-dependent acetylation of a variety of hydroxyl-bearing acceptors such as chloramphenicol and streptogramin, among others. Members of this class of enzymes include Enterococcus faecium streptogramin A acetyltransferase and Pseudomonas aeruginosa chloramphenicol acetyltransferase. They contain repeated copies of a six-residue hexapeptide repeat sequence motif (X-[STAV]-X-[LIV]-[GAED]-X) and adopt a left-handed parallel beta helix (LbH) structure. The active enzyme is a trimer with CoA and substrate binding sites at the interface of two separate LbH subunits. XATs are implicated in inactivating xenobiotics leading to xenobiotic resistance in patients.	9.50556e-71
NZ_ALTZ01000023.1\|WP_000438314.1\|20895_21312_-\|nucleoside-diphosphate-kinase	gnl\|CDD\|179085	PRK00668, ndk, mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-; Validated.	4.64422e-78
NZ_ALTZ01000023.1\|WP_000929489.1\|23457_24327_-\|type-II-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274694	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is a prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 variant of the NMENI subtype of CRISPR/Cas system.	2.54315e-139
NZ_ALTZ01000023.1\|WP_000590706.1\|22467_23133_-\|type-II-A-CRISPR-associated-protein-Csn2	gnl\|CDD\|213408	cd09758, Csn2, CRISPR/Cas system-associated protein Csn2. Csn2 is a Nmeni subtype-specific Cas protein, which may function in the adaptation process which mediates the incorporation of foreign nucleic acids into the microbial host genome. Csn 2 may interact directly with double-stranded DNA. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA. Csn2 has been predicted to be a functional analog of Cas4 based on anti-correlated phyletic patterns; also known as SPy1049 family.	3.61399e-122
NZ_ALTZ01000023.1\|WP_000159234.1\|32613_32985_-\|YbgA-family-protein	gnl\|CDD\|377982	pfam08349, DUF1722, Protein of unknown function (DUF1722). This domain of unknown function is found in bacteria and archaea and is homologous to the hypothetical protein ybgA from E. coli.	6.08694e-28
NZ_ALTZ01000023.1\|WP_000653357.1\|28828_29485_-\|TIGR01906-family-membrane-protein	gnl\|CDD\|226884	COG4478, COG4478, Predicted membrane protein [Function unknown].	9.75792e-52
NZ_ALTZ01000023.1\|WP_000665410.1\|14382_14817_-\|peptide-methionine-(R)-S-oxide-reductase-MsrB	gnl\|CDD\|234692	PRK00222, PRK00222, peptide-methionine (R)-S-oxide reductase MsrB.	6.40832e-86
NZ_ALTZ01000023.1\|WP_000168898.1\|11438_14231_-\|cation-transporting-P-type-ATPase	gnl\|CDD\|223550	COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism].	0
NZ_ALTZ01000023.1\|WP_001019133.1\|18927_20760_-\|elongation-factor-4	gnl\|CDD\|235462	PRK05433, PRK05433, GTP-binding protein LepA; Provisional.	0
NZ_ALTZ01000023.1\|WP_000523795.1\|30245_30983_-\|acyl-ACP-thioesterase	gnl\|CDD\|366738	pfam01643, Acyl-ACP_TE, Acyl-ACP thioesterase. This family consists of various acyl-acyl carrier protein (ACP) thioesterases (TE) these terminate fatty acyl group extension via hydrolysing an acyl group on a fatty acid.	3.68196e-111
NZ_ALTZ01000023.1\|WP_000065321.1\|10335_11439_-\|DUF2974-domain-containing-protein	gnl\|CDD\|371412	pfam11187, DUF2974, Protein of unknown function (DUF2974). This bacterial family of proteins has no known function.	1.82724e-105
NZ_ALTZ01000023.1\|WP_000122194.1\|23119_23461_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	2.38084e-52
NZ_ALTZ01000023.1\|WP_000323544.1\|29474_30245_-\|TIGR01457-family-HAD-type-hydrolase	gnl\|CDD\|319832	cd07530, HAD_Pase_UmpH-like, UmpH/NagD family phosphatase, similar to Escherichia coli UmpH UMP phosphatase/NagD nucleotide phosphatase and Mycobacterium tuberculosis Rv1692 glycerol 3-phosphate phosphatase. Escherichia coli UmpH/NagD is a ribonucleoside tri-, di-, and monophosphatase with a preference for purines, it shows peak activity with UMP and functions in UMP-degradation. It is also an effective phosphatase with AMP, GMP and CMP. Mycobacterium tuberculosis phosphatase, Rv1692 is a glycerol 3-phosphate phosphatase. Rv1692 is the final enzyme involved in glycerophospholipid recycling/catabolism. This subfamily belongs to the UmpH/NagD phosphatase family, and to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	1.19143e-132
NZ_ALTZ01000023.1\|WP_029662154.1\|16048_18667_-\|pneumococcal-type-histidine-triad-protein	gnl\|CDD\|380193	NF033189, internalin_A, class 1 internalin InlA. Internalins, as found in the intracellular human pathogen Listeria monocytogenes, are paralogous surface or secreted proteins with an N-terminal signal peptide, leucine-rich repeats, and usually a C-terminal LPXTG processing and cell surface anchoring site. See PMID:17764999 for a general discussion of internalins. Members of this family are internalin A (InlA), a class 1 (LPXTG-type) internalin.	1.10721e-21
NZ_ALTZ01000023.1\|WP_000621142.1\|14816_15281_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	5.91796e-19

>NZ_ALTZ01000023.1|WP_011058334.1|21444_21615_-|hypothetical-protein
MKGYNSNLMVKGLGCSTLYLIISLTALVLLVIAGVFFVINTCKLTRKAVENLSIIN
>NZ_ALTZ01000023.1|WP_000438314.1|20895_21312_-|nucleoside-diphosphate-kinase
MEQTFFMIKPDGVKRGFIGEVISRIERRGFSIDRLEVRYADADILKRHYAELTDRPFFPTLVDYMTSGPVIIGVISGEEVISTWRTMMGSTNPKDALPGTIRGDFAQAPSPNQATCNIVHGSDSPESATREIAIWFNN
>NZ_ALTZ01000023.1|WP_001019133.1|18927_20760_-|elongation-factor-4
MNIEDLKKRQEKIRNFSIIAHIDHGKSTLADRILEKTETVSSREMQAQLLDSMDLERERGITIKLNAIELNYTAKDGETYIFHLIDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQTLANVYLALDNDLEILPVINKIDLPAADPERVRAEVEDVIGLDASEAVLASAKAGIGIEEILEQIVEKVPAPTGEVDAPLQALIFDSVYDAYRGVILQVRIVNGMVKPGDKIQMMSNGKTFDVTEVGIFTPKAVGRDFLATGDVGYIAASIKTVADTRVGDTITLANNPAIEPLHGYKQMNPMVFAGLYPIESNKYNDLREALEKLQLNDASLQFEPETSQALGFGFRCGFLGLLHMDVIQERLEREFNIDLIMTAPSVVYHVNTTDGEMLEVSNPSEFPDPTRVDSIEEPYVKAQIMVPQEFVGAVMELAQRKRGDFVTMDYIDDNRVNVIYQIPLAEIVFDFFDKLKSSTRGYASFDYEISEYRRSQLVKMDILLNGDKVDALSFIVHKEFAYERGKLIVDKLKKIIPRQQFEVPIQAAIGQKIVARSDIKALRKNVLAKCYGGDVSRKRKLLEKQKAGKKRMKAIGSVEVPQEAFLSVLSMDDDDKK
>NZ_ALTZ01000023.1|WP_029662154.1|16048_18667_-|pneumococcal-type-histidine-triad-protein
MIALAGLVLSCHFALTACHTQEHKNSHHIKTKQVAKKKANKKKVSVKESHKKRKGVAGVDFPTDDGFLLTKDSKILSHTDSGIVVAHGNHSHFIFYSDLKGSKFSYLIPNANTKTNKNQAVRNFKAGAVAVNTLNDGYVFNPADIVSEDANGYVVRHGDHFHYIPKASLSQQKQVQASRAVSRLGNQSNSHYRVNSSKIAGLHYPTSNGFLFNGRGIKGTTPTGILVEHHNHLHFISFADLRKGGWGSIADRYQPQKKADSKKQSPSSKKPRTENTLPKDIKDKLAYLARELHLDISRIRVLKTLNGEIGFEYPHDDHTHVIMAKDIDLSKPIPNPHHDDEDHHKGHHHDESDHKHEEHEHTKSNKLSDEDQKKLIYLAEKLGLNPNQIEVLTSEDGSIIFKYPHDDHSHTIASKDIEIGKPIPDGHHDHSHAKDKVGMATLKQIGFDDEIIQDILHADAPTPFPSNETNPEKMRQWLATVTKINIGQRTNPFQRFGLSLMPNIEVLGIGFTPINDMTPVLQFKKLKQLWMTNTGITDYSFLDKMPLLEGLDISQNGIKDLSFLTKYKQLSLIAAANNGITSLKPLAELPNLQFLVLSHNNISDLTPLSNLTKLQELHLDHNNVKNLSALSGKKDLKVLDLSNNKSADLSTLKTTSLETLLLNETNTSNLSFLKQNPKVSNLTINNAKLASLDGIEESDEIVKVEAEGNQIKSLVLKNKQGSLKFLNVTNNQLTSLEGVNNYTSLETLSVSKNKLESLDIKTPNKTVTNLDFSHNNVPTSQLKLNEKNIPEAVAKNFPAVVEGSMVGNGSLAEKAAMASKEDKQVSDNTNHQKNTEKSAQANADSKKENPKTHDEHHDHEETDHAHVGHHHH
>NZ_ALTZ01000023.1|WP_000180007.1|15289_15949_-|HD-domain-containing-protein
MTMVKREDVILNATENMVHHKLKNDPSGHDWFHIVRVRNLAVELAHKEGANTFICQMAALLHDIIDDKICQDSKQASYELTQWLYSQDLAIAEVEHILDILENISFKAGTGLTMKTLEGQIVQDADRLDAMGAIGIARTMAYSGSKGRLIHDPNLKPRENLTLEEYRNGQDTAIMHFYEKLLKLKDLMNTKQGKMLAQKRHDFLELYLAEFYAEWNGKR
>NZ_ALTZ01000023.1|WP_000621142.1|14816_15281_-|GNAT-family-N-acetyltransferase
MIRRAKEKDLPDIAELLKQILMLHHEVRPDIFHTRGSKFSKEQLKEMLIDESKPIFVYESDEGKVVAHLFLQLQEKRDLPRKSFKTLYIDDLCIDEEVRGQQIGQKLMDFARQYAKKHGCYNITLNVWNDNQRAVSFYEKLGFKPQQTQMEEIL
>NZ_ALTZ01000023.1|WP_000665410.1|14382_14817_-|peptide-methionine-(R)-S-oxide-reductase-MsrB
MKETQEELRQRIGHTAYQVTQNSATEHAFTGKYDDFFEEGIYVDIVSGEVLFSSLDKFQSGCGWPAFSKPIENRMVTNHQDHSHGMHRIEVRSRQADSHLGHVFNDGPVDAGGLRYCINSAALDFIPYDQMAKRGYGDYLSLFD
>NZ_ALTZ01000023.1|WP_000168898.1|11438_14231_-|cation-transporting-P-type-ATPase
MASTNNVSDTNTRFAKEELEEVFEELGTTQGGLSDEEVAVRQKKYGLNLLSEVKQESIILLFLKNFTSLMAILLWVGGFVAIVSNSLELGLAIWMVNVINGIFSFIQEYRASQATQALEKMLPSYSRVLRKGSEEKILSEQLVPGDIVLIEEGDRISADGRLIKTTDLQVNQSALTGESNPIYKDSNVENDQSKTLIECDNMVFAGTTVSSGSATMVVTAIGMQTQFGQIADLTQGMKSEKSPLQRELDRLTKQISIISITVGIIFFLAATFFVKEPVSKSFIFALGMIVAFIPEGLLPTVTLSLAMAVQRMAKEHALVKKLSSVETLGATSVICSDKTGTLTQNEMTVNHLWQNGKSYQVTGLGYAPEGQILFEGDNICFGNSDRGDLEKLIRFAHLCSNAQVLPPNDDRSTYTVLGDPTEACLNVLLEKSGINIQENRKFAPRLKELPFDSVRKRMTTIHSLGGDEKDKKISITKGAPKEILDLSDYVLSDGKVIPLNKEERNKIQLANDTFAKDGLRVLAVSYCDIEGFSKEQWTQENLEQHMVFIGLIAMSDPPREGVREAIDKCHAASIRIIMVTGDYGLTALSIAKNIGIIRNDDAKVISGLELSEMTDSQLKKELSGEVVFARVAPEQKYRVVTILQEMGEVVAVTGDGVNDAPALKKSDIGVAMGVTGTDVAKESADMILTDDHFASIVHAVEEGRAVYQNIKKFLTYIFNSNTPEAVPSAFFLFSKGFIPLPLTVMQILAVDLGTDMLPALGLGVEPPETDVMNRPPRRLTDRLLDKGLLIKSFLWYGTIESVLAMGGFFWAHYLRYGNFTFFVANGIPYREATTMTLGAIIFSQIGMVMNSRTSYQSIKALSIFGNKLINFGIIMEILAFLVLVYVPLFHNLFNTASLGLSHWLYLISCPFIMIGLDEVRKLFSSRKNKR
>NZ_ALTZ01000023.1|WP_000065321.1|10335_11439_-|DUF2974-domain-containing-protein
MSNIITYLKNNSNLTFDELALNDVDILCLNEFGYISFEKLINTTEMKSVLVCELYHEYLQTMAKSYSFMFTSQRHDLCQLMMTSKRFKNLTLSYYRAEISLEFEKQFAAMVFTIPNINYHQVVFRGTDANLIGWKEDFKLTYMREISAHRSAIKYLNTILPYFDKVVLSGHSKGGNLALYAAMFTKPDLKAKIDLIWLIDSPGLQKTLLPTTEYKTTKQKCIRLLPEESIVGMMLYSDIEPLIISSNARGILQHDVTTWEIQEPAILKTGTGLSLKSICFEKTFQQWMAELKSQERKLFFDLLFDSFLSSGVSSLDDFNLASRAKMMKAFHSFRELDDDKKRLFNKSLKLLVTIFWGAYHDNSRETK
>NZ_ALTZ01000023.1|WP_000146566.1|9576_10215_+|CatB-related-O-acetyltransferase
MASILKKHLEKRLELKNDPMRTDMSTGASYPKYGFSVGKYTYGYQQFFYEGVNLKEIGAFCSIAQNVTITGLNHPTDHITTNPFIYYKSRGFINEDRADLIDEKKNGKVIIGNDVWIGTNVTILPSVTIGNGAIIGAGSVITKDIPDYGVVAGTPAKIIKYRFSEEEITLLNASQWWNWSDEAIKEHISEFSDKKEFFNTLKSISENKNHKL
>NZ_ALTZ01000023.1|WP_000590706.1|22467_23133_-|type-II-A-CRISPR-associated-protein-Csn2
MIKINFPILDEPLVLSNATILTIEDVSVYSSLVKHFYQYDVDEHLKLFDDKQKSLKATELMLVTDILGYDVNSAPILKLIHGDLENQFNEKPEVKSMVEKLAATITELIAFECLENELDLEYDEITILELIKALGVKIETQSDTIFEKCFEIIQVYHYLTKKNLLVFVNSGAYLTKDEVIKLCEYINLMQKSVLFLEPRRLYDLPQYVIDKDYFLIGENMV
>NZ_ALTZ01000023.1|WP_000122194.1|23119_23461_-|CRISPR-associated-endonuclease-Cas2
MSYRYMRMILMFDMPTETAEERKAYRKFRKFLLSEGFIMHQFSVYSKLLLNNTANNAMIGRLKVNNPKKGNITLLTVTEKQFARMVYLHGERNTSVANSDSRLVFLGDSYDQD
>NZ_ALTZ01000023.1|WP_000929489.1|23457_24327_-|type-II-CRISPR-associated-endonuclease-Cas1
MAGWRTVVVNTHSKLSYKNNHLIFKDSYQTEMIHLSEIDILIMETTDIVLSTMLIKRLVDENILVIFCDDKRLPTAMLMPYYARHDSSLQLSRQMSWIEDVKADVWTSIIAQKILNQSFYLGECSFFEKSQSIMNLYHDLEPFDPSNREGHAARIYFNTLFGNDFSREQDNPINAGLDYGYSLLLSMFAREVVKCGCMTQFGLKHANQFNQFNLASDIMEPFRPIVDRIIYENRQSDFVKMKRELFSMFSETYSYNGKEMYLSNIVSDYTKKVIKSLNSDGNGIPEFRI
>NZ_ALTZ01000023.1|WP_001040083.1|24328_28441_-|type-II-CRISPR-RNA-guided-endonuclease-Cas9
MNKPYSIGLDIGTNSVGWSIITDDYKVPAKKMRVLGNTDKEYIKKNLIGALLFDGGNTAADRRLKRTARRRYTRRRNRILYLQEIFAEEMSKVDDSFFHRLEDSFLVEEDKRGSKYPIFATLQEEKDYHEKFSTIYHLRKELADKKEKADLRLIYIALAHIIKFRGHFLIEDDSFDVRNTDISKQYQDFLEIFNTTFENNDLLSQNVDVEAILTDKISKSAKKDRILAQYPNQKSTGIFAEFLKLIVGNQADFKKYFNLEDKTPLQFAKDSYDEDLENLLGQIGDEFADLFSAAKKLYDSVLLSGILTVIDLSTKAPLSASMIQRYDEHREDLKQLKQFVKASLPEKYQEIFADSSKDGYAGYIEGKTNQEAFYKYLSKLLTKQEDSENFLEKIKNEDFLRKQRTFDNGSIPHQVHLTELKAIIRRQSEYYPFLKENQDRIEKILTFRIPYYIGPLAREKSDFAWMTRKTDDSIRPWNFEDLVDKEKSAEAFIHRMTNNDFYLPEEKVLPKHSLIYEKFTVYNELTKVRYKNEQGETYFFDSNIKQEIFDGVFKEHRKVSKKKLLDFLAKEYEEFRIVDVIGLDKENKAFNASLGTYHDLEKILDKDFLDNPDNESILEDIIQTLTLFEDREMIKKRLENYKDLFTESQLKKLYRRHYTGWGRLSAKLINGIRDKESQKTILDYLIDDGRSNRNFMQLINDDGLSFKSIISKAQAGSHSDNLKEVVGELAGSPAIKKGILQSLKIVDELVKVMGYEPEQIVVEMARENQTTNQGRRNSRQRYKLLDDGVKNLASDLNGNILKEYPTDNQALQNERLFLYYLQNGRDMYTGEALDIDNLSQYDIDHIIPQAFIKDDSIDNRVLVSSAKNRGKSDDVPSLEIVKDCKVFWKKLLDAKLMSQRKYDNLTKAERGGLTSDDKARFIQRQLVETRQITKHVARILDERFNNELDSKGRRIRKVKIVTLKSNLVSNFRKEFGFYKIREVNNYHHAHDAYLNAVVAKAILTKYPQLEPEFVYGDYPKYNSYKTRKSATEKLFFYSNIMNFFKTKVTLADGTVVVKDDIEVNNDTGEIVWDKKKHFATVRKVLSYPQNNIVKKTEIQTGGFSKESILAHGNSDKLIPRKTKDIYLDPKKYGGFDSPIVAYSVLVVADIKKGKAQKLKTVTELLGITIMERSRFEKNPSAFLESKGYLNIRADKLIILPKYSLFELENGRRRLLASAGELQKGNELALPTQFMKFLYLASRYNESKGKPEEIEKKQEFVNQHVSYFDDILQLINDFSKRVILADANLEKINKLYQDNKENISVDELANNIINLFTFTSLGAPAAFKFFDKIVDRKRYTSTKEVLNSTLIHQSITGLYETRIDLGKLGED
>NZ_ALTZ01000023.1|WP_000653357.1|28828_29485_-|TIGR01906-family-membrane-protein
MKDKLLVVLTWIWIISLATLATIYIAWLIYPIEIQFLKLEKVVYLKAETIYYNFNKLMIYLTHPFISDLNMPSFPSSEDGLKHFADVKYLFTLAHGLFVILTFPVIYFLRRGWKQKSIFLYEGFFKIAIMLPIFIVVCAFLLGFDQFFTLFHEVLFPGDSTWQFNPLTDPVIWILPETFFLHCFIIFLLIYETITIILLIIGRKHLKLRKYKNKMQAL
>NZ_ALTZ01000023.1|WP_000323544.1|29474_30245_-|TIGR01457-family-HAD-type-hydrolase
MAYKGYLIDLDGTIYKGKSRIPAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVETPLETIYTATMATVDYMNDMNRGKTAYVIGEEGLKKAIADAGYVEDTKNPAYVVVGLDWNVTYDKLATATLAIQNGALFIGTNPDLNIPTERGLLPGAGSLNALLEAATRIKPVFIGKPNAIIMNKALEILNIPRNQAVMVGDNYLTDIMAGINNDIDTLLVTTGFTTVEEVPDLPIQPSYVLASLDEWTFNEG
>NZ_ALTZ01000023.1|WP_000523795.1|30245_30983_-|acyl-ACP-thioesterase
MGLLYRETYEVPFYESDTNHYMKLPQLLALALQISAKQSLKLGIGDDIVFKRYGLVWVVTDYIIDIERLPKHAEKIVIETEAKAHNKLLCYRYFYIYGEDGQKIITISSAFVLMDFKTRKIHPVLDDITSIYQSQRIKKVIRGPKYHPIGDSKVKQYHVRYFDLDMNGHVNNSKYLEWMYDVLDLDFLSSHIPKKIDLKYIKEIQYGTDIKSHWYQDGLVTRHDIIGGDAIHAQARIEWQEKKED
>NZ_ALTZ01000023.1|WP_000914664.1|30986_32117_-|oxygen-independent-coproporphyrinogen-III-oxidase
MLKKPTSAYVHIPFCTQICYYCDFSKVFIKNQPVDAYLQALIREFRSYDITELRTLYIGGGTPTSISAVQLDYLLTELSRDLNLNTLEEFTIEANPGDLTVDKIEVLQKSAVNRVSLGVQTFNDKHLKRIGRSHNEAQIYSTIDALKTAGFQNISIDLIYALPGQTMDDVRSNVAKALSLNIPHLSLYSLILEHHTVFMNKMRRGKLHLPTEDLEAEMFEYIISEMERNGFEHYEISNFTKPGFESRHNLMYWDNVEYYGVGAGASGYLDGIRYRNRGPIQHYLKGVSEGNARLSEEVLSKNEMMEEELFLGLRKKEGVSIGKFEQKFGTSFEKRYGQIVQELQSDGLLKENNGFIQMTKKGLFLGDTVAEKFIVE
>NZ_ALTZ01000023.1|WP_001241816.1|32208_32589_-|hypothetical-protein
MRLWHQDIIELLPRQQLLGQHRECCALRGNGWGRKHETVDYVFRYSPYRLFAYHQLVMEEMMERGYRVSKEWLIAEYRGMKCPRYDTLNPVDLETPIYPEHNQDYLQECLWNLKAKGIDLPINKIK
>NZ_ALTZ01000023.1|WP_000159234.1|32613_32985_-|YbgA-family-protein
MTKEAELLWAKHKYLVLSKSQKIYLDIRQTLKSPNCTVLDVQSLIDQAVLLEESPSQVTNAYMHIWGYFKNKAERQEKEEFLTLLEKYRKTGYQRRKLLAFLKQLLAKYPNSYLQNSSIFEEE

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_ALTZ01000023_1	1.1\|21906\|30\|NZ_ALTZ01000023\|CRT	21906-21935	30	MK448790	Streptococcus phage Javan515, complete genome	1780-1809	0	1.0
NZ_ALTZ01000023_1	1.1\|21906\|30\|NZ_ALTZ01000023\|CRT	21906-21935	30	MK448957	Streptococcus phage Javan484, complete genome	1776-1805	0	1.0
NZ_ALTZ01000023_1	1.3\|22039\|29\|NZ_ALTZ01000023\|CRT,PILER-CR,CRISPRCasFinder	22039-22067	29	MK448865	Streptococcus phage Javan182, complete genome	3299-3327	0	1.0
NZ_ALTZ01000023_1	1.4\|22104\|30\|NZ_ALTZ01000023\|CRT,PILER-CR,CRISPRCasFinder	22104-22133	30	MK448829	Streptococcus phage Javan7, complete genome	23760-23789	0	1.0
NZ_ALTZ01000023_1	1.4\|22104\|30\|NZ_ALTZ01000023\|CRT,PILER-CR,CRISPRCasFinder	22104-22133	30	MK448736	Streptococcus phage Javan35, complete genome	24243-24272	0	1.0
NZ_ALTZ01000023_1	1.4\|22104\|30\|NZ_ALTZ01000023\|CRT,PILER-CR,CRISPRCasFinder	22104-22133	30	MK448781	Streptococcus phage Javan5, complete genome	26265-26294	0	1.0
NZ_ALTZ01000023_1	1.4\|22104\|30\|NZ_ALTZ01000023\|CRT,PILER-CR,CRISPRCasFinder	22104-22133	30	MH853355	Streptococcus phage LF1, complete genome	14617-14646	0	1.0
NZ_ALTZ01000023_1	1.4\|22104\|30\|NZ_ALTZ01000023\|CRT,PILER-CR,CRISPRCasFinder	22104-22133	30	MK448938	Streptococcus phage Javan44, complete genome	24244-24273	0	1.0
NZ_ALTZ01000023_1	1.4\|22104\|30\|NZ_ALTZ01000023\|CRT,PILER-CR,CRISPRCasFinder	22104-22133	30	MK448911	Streptococcus phage Javan34, complete genome	24243-24272	0	1.0
NZ_ALTZ01000023_1	1.4\|22104\|30\|NZ_ALTZ01000023\|CRT,PILER-CR,CRISPRCasFinder	22104-22133	30	MK448837	Streptococcus phage Javan10, complete genome	22289-22318	0	1.0
NZ_ALTZ01000023_1	1.4\|22104\|30\|NZ_ALTZ01000023\|CRT,PILER-CR,CRISPRCasFinder	22104-22133	30	MK448742	Streptococcus phage Javan37, complete genome	24080-24109	0	1.0
NZ_ALTZ01000023_1	1.4\|22104\|30\|NZ_ALTZ01000023\|CRT,PILER-CR,CRISPRCasFinder	22104-22133	30	MH853358	Streptococcus phage LF4, complete genome	14617-14646	0	1.0
NZ_ALTZ01000023_1	1.4\|22104\|30\|NZ_ALTZ01000023\|CRT,PILER-CR,CRISPRCasFinder	22104-22133	30	MK448916	Streptococcus phage Javan36, complete genome	24243-24272	0	1.0
NZ_ALTZ01000023_1	1.3\|22039\|29\|NZ_ALTZ01000023\|CRT,PILER-CR,CRISPRCasFinder	22039-22067	29	MK448795	Streptococcus phage Javan527, complete genome	5598-5626	1	0.966
NZ_ALTZ01000023_1	1.6\|22236\|30\|NZ_ALTZ01000023\|CRT,PILER-CR,CRISPRCasFinder	22236-22265	30	NC_031245	Bacillus phage SP-15, complete genome	4409-4438	5	0.833
NZ_ALTZ01000023_1	1.1\|21906\|30\|NZ_ALTZ01000023\|CRT	21906-21935	30	NZ_CP021887	Helicobacter apodemus strain SCJK1 plasmid unnamed, complete sequence	23990-24019	6	0.8
NZ_ALTZ01000023_1	1.1\|21906\|30\|NZ_ALTZ01000023\|CRT	21906-21935	30	NC_042112	Campylobacter phage CP81, complete genome	65375-65404	6	0.8
NZ_ALTZ01000023_1	1.1\|21906\|30\|NZ_ALTZ01000023\|CRT	21906-21935	30	NC_015464	Campylobacter phage NCTC12673, complete genome	110180-110209	6	0.8
NZ_ALTZ01000023_1	1.1\|21906\|30\|NZ_ALTZ01000023\|CRT	21906-21935	30	KF148616	Campylobacter phage CP8, complete genome	63306-63335	6	0.8
NZ_ALTZ01000023_1	1.1\|21906\|30\|NZ_ALTZ01000023\|CRT	21906-21935	30	NC_016562	Campylobacter phage CPX, complete genome	63073-63102	6	0.8
NZ_ALTZ01000023_1	1.1\|21906\|30\|NZ_ALTZ01000023\|CRT	21906-21935	30	KX236333	Campylobacter phage PC14, complete genome	10137-10166	6	0.8
NZ_ALTZ01000023_1	1.1\|21906\|30\|NZ_ALTZ01000023\|CRT	21906-21935	30	JX569801	Campylobacter phage CP30A, complete genome	110808-110837	6	0.8
NZ_ALTZ01000023_1	1.4\|22104\|30\|NZ_ALTZ01000023\|CRT,PILER-CR,CRISPRCasFinder	22104-22133	30	MG029511	Staphylococcus phage phiSa2wa_st30, complete genome	21095-21124	6	0.8
NZ_ALTZ01000023_1	1.6\|22236\|30\|NZ_ALTZ01000023\|CRT,PILER-CR,CRISPRCasFinder	22236-22265	30	NC_009751	Lactococcus lactis subsp. lactis K214 plasmid pK214, complete sequence	18502-18531	6	0.8
NZ_ALTZ01000023_1	1.6\|22236\|30\|NZ_ALTZ01000023\|CRT,PILER-CR,CRISPRCasFinder	22236-22265	30	NC_020237	Staphylococcus hyicus plasmid pSTE1 complete sequence	1253-1282	6	0.8
NZ_ALTZ01000023_1	1.6\|22236\|30\|NZ_ALTZ01000023\|CRT,PILER-CR,CRISPRCasFinder	22236-22265	30	NZ_CP047431	Spiroplasma citri strain BLH-13 plasmid pSciBLH13-3, complete sequence	29055-29084	6	0.8
NZ_ALTZ01000023_1	1.6\|22236\|30\|NZ_ALTZ01000023\|CRT,PILER-CR,CRISPRCasFinder	22236-22265	30	NZ_CP046369	Spiroplasma citri strain BR12 plasmid pScpBR12-1, complete sequence	48911-48940	6	0.8
NZ_ALTZ01000023_1	1.6\|22236\|30\|NZ_ALTZ01000023\|CRT,PILER-CR,CRISPRCasFinder	22236-22265	30	NZ_CP046372	Spiroplasma citri strain LB 319 plasmid pScpLB319-1, complete sequence	2789-2818	6	0.8
NZ_ALTZ01000023_1	1.6\|22236\|30\|NZ_ALTZ01000023\|CRT,PILER-CR,CRISPRCasFinder	22236-22265	30	NZ_CP047439	Spiroplasma citri strain BLH-MB plasmid pSciBLHMB-2, complete sequence	18123-18152	6	0.8
NZ_ALTZ01000023_1	1.6\|22236\|30\|NZ_ALTZ01000023\|CRT,PILER-CR,CRISPRCasFinder	22236-22265	30	NZ_CP047440	Spiroplasma citri strain BLH-MB plasmid pSciBLHMB-3, complete sequence	27483-27512	6	0.8
NZ_ALTZ01000023_1	1.6\|22236\|30\|NZ_ALTZ01000023\|CRT,PILER-CR,CRISPRCasFinder	22236-22265	30	NZ_CP047427	Spiroplasma citri strain C189 plasmid pScpC189-1, complete sequence	19427-19456	6	0.8
NZ_ALTZ01000023_1	1.6\|22236\|30\|NZ_ALTZ01000023\|CRT,PILER-CR,CRISPRCasFinder	22236-22265	30	NZ_CP053310	Spiroplasma citri strain C5 plasmid pScpC5-6, complete sequence	37167-37196	6	0.8
NZ_ALTZ01000023_1	1.6\|22236\|30\|NZ_ALTZ01000023\|CRT,PILER-CR,CRISPRCasFinder	22236-22265	30	NZ_CP042474	Spiroplasma citri strain CC-2 plasmid pScpCC2-2, complete sequence	9361-9390	6	0.8
NZ_ALTZ01000023_1	1.1\|21906\|30\|NZ_ALTZ01000023\|CRT	21906-21935	30	NZ_CP009254	Buchnera aphidicola (Aphis glycines) strain BAg plasmid pLeu clone SA-pLeu, complete sequence	4131-4160	7	0.767
NZ_ALTZ01000023_1	1.4\|22104\|30\|NZ_ALTZ01000023\|CRT,PILER-CR,CRISPRCasFinder	22104-22133	30	NC_011256	Borrelia duttonii Ly plasmid pl70, complete sequence	14901-14930	7	0.767
NZ_ALTZ01000023_1	1.4\|22104\|30\|NZ_ALTZ01000023\|CRT,PILER-CR,CRISPRCasFinder	22104-22133	30	JN638751	Bacillus phage G, complete genome	84396-84425	7	0.767
NZ_ALTZ01000023_1	1.5\|22170\|30\|NZ_ALTZ01000023\|CRT,PILER-CR,CRISPRCasFinder	22170-22199	30	NZ_CP034165	Escherichia albertii strain 2014C-4015 plasmid p2014C-4015-1, complete sequence	25871-25900	7	0.767
NZ_ALTZ01000023_1	1.6\|22236\|30\|NZ_ALTZ01000023\|CRT,PILER-CR,CRISPRCasFinder	22236-22265	30	NC_007930	Lactobacillus salivarius UCC118 plasmid pMP118, complete sequence	34134-34163	7	0.767
NZ_ALTZ01000023_1	1.6\|22236\|30\|NZ_ALTZ01000023\|CRT,PILER-CR,CRISPRCasFinder	22236-22265	30	CP002037	Lactobacillus salivarius CECT 5713 plasmid pHN3, complete sequence	34348-34377	7	0.767
NZ_ALTZ01000023_1	1.1\|21906\|30\|NZ_ALTZ01000023\|CRT	21906-21935	30	KT878766	Staphylococcus phage P1105, complete genome	41667-41696	8	0.733
NZ_ALTZ01000023_1	1.1\|21906\|30\|NZ_ALTZ01000023\|CRT	21906-21935	30	AY508486	Bacteriophage 77, complete genome	41191-41220	8	0.733
NZ_ALTZ01000023_1	1.1\|21906\|30\|NZ_ALTZ01000023\|CRT	21906-21935	30	NC_005356	Staphylococcus phage 77, complete genome	41191-41220	8	0.733
NZ_ALTZ01000023_1	1.1\|21906\|30\|NZ_ALTZ01000023\|CRT	21906-21935	30	NC_048681	Staphylococcus phage phiSa2wa_st22, complete genome	14704-14733	8	0.733
NZ_ALTZ01000023_1	1.1\|21906\|30\|NZ_ALTZ01000023\|CRT	21906-21935	30	MG029512	Staphylococcus phage phiSa2wa_st59, complete genome	18085-18114	8	0.733
NZ_ALTZ01000023_1	1.1\|21906\|30\|NZ_ALTZ01000023\|CRT	21906-21935	30	GQ398772	Staphylococcus phage P954, complete genome	18200-18229	8	0.733
NZ_ALTZ01000023_1	1.1\|21906\|30\|NZ_ALTZ01000023\|CRT	21906-21935	30	KF831354	Staphylococcus phage phiBU01, complete genome	26094-26123	8	0.733
NZ_ALTZ01000023_1	1.1\|21906\|30\|NZ_ALTZ01000023\|CRT	21906-21935	30	NC_048710	Staphylococcus phage SA1014ruMSSAST7, complete genome	17264-17293	8	0.733
NZ_ALTZ01000023_1	1.1\|21906\|30\|NZ_ALTZ01000023\|CRT	21906-21935	30	AP011955	Staphylococcus phage phi5967PVL DNA, complete genome	18239-18268	8	0.733
NZ_ALTZ01000023_1	1.1\|21906\|30\|NZ_ALTZ01000023\|CRT	21906-21935	30	DQ530361	Staphylococcus aureus phage phiNM3, complete genome	17178-17207	8	0.733
NZ_ALTZ01000023_1	1.1\|21906\|30\|NZ_ALTZ01000023\|CRT	21906-21935	30	NC_025460	Staphylococcus phage phiSa119, complete genome	16878-16907	8	0.733
NZ_ALTZ01000023_1	1.1\|21906\|30\|NZ_ALTZ01000023\|CRT	21906-21935	30	KJ452292	Staphylococcus phage 23MRA, complete genome	457-486	8	0.733
NZ_ALTZ01000023_1	1.1\|21906\|30\|NZ_ALTZ01000023\|CRT	21906-21935	30	NC_023499	Staphylococcus phage StauST398-4, complete genome	18298-18327	8	0.733
NZ_ALTZ01000023_1	1.1\|21906\|30\|NZ_ALTZ01000023\|CRT	21906-21935	30	NC_048635	Staphylococcus phage P630, complete genome	39833-39862	8	0.733
NZ_ALTZ01000023_1	1.1\|21906\|30\|NZ_ALTZ01000023\|CRT	21906-21935	30	NC_048713	Staphylococcus aureus phage SA345ruMSSAST8, complete genome	17809-17838	8	0.733
NZ_ALTZ01000023_1	1.1\|21906\|30\|NZ_ALTZ01000023\|CRT	21906-21935	30	NC_048634	Staphylococcus phage P282, complete genome	41390-41419	8	0.733
NZ_ALTZ01000023_1	1.1\|21906\|30\|NZ_ALTZ01000023\|CRT	21906-21935	30	AP011956	Staphylococcus phage phi7247PVL DNA, complete genome	18239-18268	8	0.733
NZ_ALTZ01000023_1	1.1\|21906\|30\|NZ_ALTZ01000023\|CRT	21906-21935	30	NC_008617	Staphylococcus phage phiNM3, complete genome	17178-17207	8	0.733
NZ_ALTZ01000023_1	1.1\|21906\|30\|NZ_ALTZ01000023\|CRT	21906-21935	30	NC_048657	Staphylococcus phage IME1361_01, complete genome	17840-17869	8	0.733
NZ_ALTZ01000023_1	1.1\|21906\|30\|NZ_ALTZ01000023\|CRT	21906-21935	30	MK496812	Capybara microvirus Cap3_SP_554, complete genome	2252-2281	8	0.733
NZ_ALTZ01000023_1	1.6\|22236\|30\|NZ_ALTZ01000023\|CRT,PILER-CR,CRISPRCasFinder	22236-22265	30	FM164764	Stygiolobus rod-shaped virus, complete genome	71-100	8	0.733
NZ_ALTZ01000023_1	1.6\|22236\|30\|NZ_ALTZ01000023\|CRT,PILER-CR,CRISPRCasFinder	22236-22265	30	FM164764	Stygiolobus rod-shaped virus, complete genome	27997-28026	8	0.733
NZ_ALTZ01000023_1	1.6\|22236\|30\|NZ_ALTZ01000023\|CRT,PILER-CR,CRISPRCasFinder	22236-22265	30	KP869105	Escherichia coli O157 typing phage 7, partial genome	90193-90222	8	0.733
NZ_ALTZ01000023_1	1.6\|22236\|30\|NZ_ALTZ01000023\|CRT,PILER-CR,CRISPRCasFinder	22236-22265	30	MN693395	Marine virus AFVG_25M229, complete genome	14721-14750	8	0.733
NZ_ALTZ01000023_1	1.6\|22236\|30\|NZ_ALTZ01000023\|CRT,PILER-CR,CRISPRCasFinder	22236-22265	30	MK327936	Escherichia phage vB_EcoM_G2540, complete genome	72227-72256	8	0.733
NZ_ALTZ01000023_1	1.6\|22236\|30\|NZ_ALTZ01000023\|CRT,PILER-CR,CRISPRCasFinder	22236-22265	30	MF001360	Escherichia phage ECO4, partial genome	82983-83012	8	0.733
NZ_ALTZ01000023_1	1.6\|22236\|30\|NZ_ALTZ01000023\|CRT,PILER-CR,CRISPRCasFinder	22236-22265	30	HM997020	Escherichia phage wV7, complete genome	71500-71529	8	0.733
NZ_ALTZ01000023_1	1.7\|22302\|30\|NZ_ALTZ01000023\|CRT,PILER-CR,CRISPRCasFinder	22302-22331	30	NZ_CP013941	Cronobacter malonaticus LMG 23826 plasmid pCMA1, complete sequence	118622-118651	8	0.733
NZ_ALTZ01000023_1	1.7\|22302\|30\|NZ_ALTZ01000023\|CRT,PILER-CR,CRISPRCasFinder	22302-22331	30	NC_023024	Cronobacter malonaticus plasmid p1, complete sequence	113254-113283	8	0.733
NZ_ALTZ01000023_1	1.1\|21906\|30\|NZ_ALTZ01000023\|CRT	21906-21935	30	NZ_CP028891	Borrelia turcica IST7 plasmid lp27, complete sequence	9397-9426	9	0.7
NZ_ALTZ01000023_1	1.1\|21906\|30\|NZ_ALTZ01000023\|CRT	21906-21935	30	NC_004740	Staphylococcus prophage phiN315, complete genome	17243-17272	9	0.7
NZ_ALTZ01000023_1	1.4\|22104\|30\|NZ_ALTZ01000023\|CRT,PILER-CR,CRISPRCasFinder	22104-22133	30	MK448824	Streptococcus phage Javan637, complete genome	5457-5486	9	0.7
NZ_ALTZ01000023_1	1.4\|22104\|30\|NZ_ALTZ01000023\|CRT,PILER-CR,CRISPRCasFinder	22104-22133	30	MK449002	Streptococcus phage Javan642, complete genome	5457-5486	9	0.7
NZ_ALTZ01000023_1	1.4\|22104\|30\|NZ_ALTZ01000023\|CRT,PILER-CR,CRISPRCasFinder	22104-22133	30	MK449003	Streptococcus phage Javan648, complete genome	5457-5486	9	0.7
NZ_ALTZ01000023_1	1.5\|22170\|30\|NZ_ALTZ01000023\|CRT,PILER-CR,CRISPRCasFinder	22170-22199	30	NZ_LR214999	Mycoplasma conjunctivae strain NCTC10147 plasmid 3	80176-80205	9	0.7
NZ_ALTZ01000023_1	1.5\|22170\|30\|NZ_ALTZ01000023\|CRT,PILER-CR,CRISPRCasFinder	22170-22199	30	LR214965	Mycoplasma fermentans strain NCTC10117 genome assembly, plasmid: 11	69768-69797	9	0.7
NZ_ALTZ01000023_1	1.5\|22170\|30\|NZ_ALTZ01000023\|CRT,PILER-CR,CRISPRCasFinder	22170-22199	30	NC_019957	Mycobacterium sp. JS623 plasmid pMYCSM01, complete sequence	389408-389437	9	0.7
NZ_ALTZ01000023_1	1.6\|22236\|30\|NZ_ALTZ01000023\|CRT,PILER-CR,CRISPRCasFinder	22236-22265	30	AJ344259	Sulfolobus virus SIRV-2 genomic DNA	26220-26249	9	0.7
NZ_ALTZ01000023_1	1.1\|21906\|30\|NZ_ALTZ01000023\|CRT	21906-21935	30	NC_004758	Neisseria meningitidis plasmid pJS-B, complete sequence	4552-4581	10	0.667
NZ_ALTZ01000023_1	1.1\|21906\|30\|NZ_ALTZ01000023\|CRT	21906-21935	30	ADWM02000138	Neisseria meningitidis K1207 plasmid, complete sequence, whole genome shotgun sequence	3014-3043	10	0.667

1. spacer 1.1|21906|30|NZ_ALTZ01000023|CRT matches to MK448790 (Streptococcus phage Javan515, complete genome) position: , mismatch: 0, identity: 1.0

ctagtatcagatttatatttaaaagctaga	CRISPR spacer
ctagtatcagatttatatttaaaagctaga	Protospacer
******************************

2. spacer 1.1|21906|30|NZ_ALTZ01000023|CRT matches to MK448957 (Streptococcus phage Javan484, complete genome) position: , mismatch: 0, identity: 1.0

ctagtatcagatttatatttaaaagctaga	CRISPR spacer
ctagtatcagatttatatttaaaagctaga	Protospacer
******************************

3. spacer 1.3|22039|29|NZ_ALTZ01000023|CRT,PILER-CR,CRISPRCasFinder matches to MK448865 (Streptococcus phage Javan182, complete genome) position: , mismatch: 0, identity: 1.0

ttagaccttgtaaaaagttccctaacgca	CRISPR spacer
ttagaccttgtaaaaagttccctaacgca	Protospacer
*****************************

4. spacer 1.4|22104|30|NZ_ALTZ01000023|CRT,PILER-CR,CRISPRCasFinder matches to MK448829 (Streptococcus phage Javan7, complete genome) position: , mismatch: 0, identity: 1.0

gaaatggtttcaacaatgtttgataatcaa	CRISPR spacer
gaaatggtttcaacaatgtttgataatcaa	Protospacer
******************************

5. spacer 1.4|22104|30|NZ_ALTZ01000023|CRT,PILER-CR,CRISPRCasFinder matches to MK448736 (Streptococcus phage Javan35, complete genome) position: , mismatch: 0, identity: 1.0

gaaatggtttcaacaatgtttgataatcaa	CRISPR spacer
gaaatggtttcaacaatgtttgataatcaa	Protospacer
******************************

6. spacer 1.4|22104|30|NZ_ALTZ01000023|CRT,PILER-CR,CRISPRCasFinder matches to MK448781 (Streptococcus phage Javan5, complete genome) position: , mismatch: 0, identity: 1.0

gaaatggtttcaacaatgtttgataatcaa	CRISPR spacer
gaaatggtttcaacaatgtttgataatcaa	Protospacer
******************************

7. spacer 1.4|22104|30|NZ_ALTZ01000023|CRT,PILER-CR,CRISPRCasFinder matches to MH853355 (Streptococcus phage LF1, complete genome) position: , mismatch: 0, identity: 1.0

gaaatggtttcaacaatgtttgataatcaa	CRISPR spacer
gaaatggtttcaacaatgtttgataatcaa	Protospacer
******************************

8. spacer 1.4|22104|30|NZ_ALTZ01000023|CRT,PILER-CR,CRISPRCasFinder matches to MK448938 (Streptococcus phage Javan44, complete genome) position: , mismatch: 0, identity: 1.0

gaaatggtttcaacaatgtttgataatcaa	CRISPR spacer
gaaatggtttcaacaatgtttgataatcaa	Protospacer
******************************

9. spacer 1.4|22104|30|NZ_ALTZ01000023|CRT,PILER-CR,CRISPRCasFinder matches to MK448911 (Streptococcus phage Javan34, complete genome) position: , mismatch: 0, identity: 1.0

gaaatggtttcaacaatgtttgataatcaa	CRISPR spacer
gaaatggtttcaacaatgtttgataatcaa	Protospacer
******************************

10. spacer 1.4|22104|30|NZ_ALTZ01000023|CRT,PILER-CR,CRISPRCasFinder matches to MK448837 (Streptococcus phage Javan10, complete genome) position: , mismatch: 0, identity: 1.0

gaaatggtttcaacaatgtttgataatcaa	CRISPR spacer
gaaatggtttcaacaatgtttgataatcaa	Protospacer
******************************

11. spacer 1.4|22104|30|NZ_ALTZ01000023|CRT,PILER-CR,CRISPRCasFinder matches to MK448742 (Streptococcus phage Javan37, complete genome) position: , mismatch: 0, identity: 1.0

gaaatggtttcaacaatgtttgataatcaa	CRISPR spacer
gaaatggtttcaacaatgtttgataatcaa	Protospacer
******************************

12. spacer 1.4|22104|30|NZ_ALTZ01000023|CRT,PILER-CR,CRISPRCasFinder matches to MH853358 (Streptococcus phage LF4, complete genome) position: , mismatch: 0, identity: 1.0

gaaatggtttcaacaatgtttgataatcaa	CRISPR spacer
gaaatggtttcaacaatgtttgataatcaa	Protospacer
******************************

13. spacer 1.4|22104|30|NZ_ALTZ01000023|CRT,PILER-CR,CRISPRCasFinder matches to MK448916 (Streptococcus phage Javan36, complete genome) position: , mismatch: 0, identity: 1.0

gaaatggtttcaacaatgtttgataatcaa	CRISPR spacer
gaaatggtttcaacaatgtttgataatcaa	Protospacer
******************************

14. spacer 1.3|22039|29|NZ_ALTZ01000023|CRT,PILER-CR,CRISPRCasFinder matches to MK448795 (Streptococcus phage Javan527, complete genome) position: , mismatch: 1, identity: 0.966

ttagaccttgtaaaaagttccctaacgca	CRISPR spacer
ttagaccttgtaaaaagttccctaatgca	Protospacer
*************************.***

15. spacer 1.6|22236|30|NZ_ALTZ01000023|CRT,PILER-CR,CRISPRCasFinder matches to NC_031245 (Bacillus phage SP-15, complete genome) position: , mismatch: 5, identity: 0.833

acaagataatttagtaatttaggaaaatat	CRISPR spacer
tcaagatactttagtaatttagaaaataat	Protospacer
 ******* *************.***  **

16. spacer 1.1|21906|30|NZ_ALTZ01000023|CRT matches to NZ_CP021887 (Helicobacter apodemus strain SCJK1 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.8

ctagtatcagatttatatttaaaagctaga	CRISPR spacer
gaattttcagattcatttttaaaagctaga	Protospacer
  * * *******.** *************

17. spacer 1.1|21906|30|NZ_ALTZ01000023|CRT matches to NC_042112 (Campylobacter phage CP81, complete genome) position: , mismatch: 6, identity: 0.8

ctagtatcagatttatatttaaaagctaga	CRISPR spacer
aaattatcagatttatatttaaatcctaaa	Protospacer
  * *******************  ***.*

18. spacer 1.1|21906|30|NZ_ALTZ01000023|CRT matches to NC_015464 (Campylobacter phage NCTC12673, complete genome) position: , mismatch: 6, identity: 0.8

ctagtatcagatttatatttaaaagctaga	CRISPR spacer
aaattatcagatttatatttaaatcctaaa	Protospacer
  * *******************  ***.*

19. spacer 1.1|21906|30|NZ_ALTZ01000023|CRT matches to KF148616 (Campylobacter phage CP8, complete genome) position: , mismatch: 6, identity: 0.8

ctagtatcagatttatatttaaaagctaga	CRISPR spacer
aaattatcagatttatatttaaatcctaaa	Protospacer
  * *******************  ***.*

20. spacer 1.1|21906|30|NZ_ALTZ01000023|CRT matches to NC_016562 (Campylobacter phage CPX, complete genome) position: , mismatch: 6, identity: 0.8

ctagtatcagatttatatttaaaagctaga	CRISPR spacer
aaattatcagatttatatttaaatcctaaa	Protospacer
  * *******************  ***.*

21. spacer 1.1|21906|30|NZ_ALTZ01000023|CRT matches to KX236333 (Campylobacter phage PC14, complete genome) position: , mismatch: 6, identity: 0.8

ctagtatcagatttatatttaaaagctaga	CRISPR spacer
aaattatcagatttatatttaaatcctaaa	Protospacer
  * *******************  ***.*

22. spacer 1.1|21906|30|NZ_ALTZ01000023|CRT matches to JX569801 (Campylobacter phage CP30A, complete genome) position: , mismatch: 6, identity: 0.8

ctagtatcagatttatatttaaaagctaga	CRISPR spacer
aaattatcagatttatatttaaatcctaaa	Protospacer
  * *******************  ***.*

23. spacer 1.4|22104|30|NZ_ALTZ01000023|CRT,PILER-CR,CRISPRCasFinder matches to MG029511 (Staphylococcus phage phiSa2wa_st30, complete genome) position: , mismatch: 6, identity: 0.8

-gaaatggtttcaacaatgtttgataatcaa	CRISPR spacer
cgttat-ttttctgcaatgtttgataatcaa	Protospacer
 *  **  **** .*****************

24. spacer 1.6|22236|30|NZ_ALTZ01000023|CRT,PILER-CR,CRISPRCasFinder matches to NC_009751 (Lactococcus lactis subsp. lactis K214 plasmid pK214, complete sequence) position: , mismatch: 6, identity: 0.8

acaagataatttagtaatttaggaaaatat	CRISPR spacer
taaagataatttagtaattcaagaaattgt	Protospacer
  *****************.*.**** *.*

25. spacer 1.6|22236|30|NZ_ALTZ01000023|CRT,PILER-CR,CRISPRCasFinder matches to NC_020237 (Staphylococcus hyicus plasmid pSTE1 complete sequence) position: , mismatch: 6, identity: 0.8

acaagataatttagtaatttaggaaaatat	CRISPR spacer
taaagataatttagtaattcaagaaattgt	Protospacer
  *****************.*.**** *.*

26. spacer 1.6|22236|30|NZ_ALTZ01000023|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP047431 (Spiroplasma citri strain BLH-13 plasmid pSciBLH13-3, complete sequence) position: , mismatch: 6, identity: 0.8

acaagataatttagtaatttaggaaaatat	CRISPR spacer
aaataaaaatttaataattttggaaaatat	Protospacer
* * .* ******.****** *********

27. spacer 1.6|22236|30|NZ_ALTZ01000023|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP046369 (Spiroplasma citri strain BR12 plasmid pScpBR12-1, complete sequence) position: , mismatch: 6, identity: 0.8

acaagataatttagtaatttaggaaaatat	CRISPR spacer
aaataaaaatttaataattttggaaaatat	Protospacer
* * .* ******.****** *********

28. spacer 1.6|22236|30|NZ_ALTZ01000023|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP046372 (Spiroplasma citri strain LB 319 plasmid pScpLB319-1, complete sequence) position: , mismatch: 6, identity: 0.8

acaagataatttagtaatttaggaaaatat	CRISPR spacer
aaataaaaatttaataattttggaaaatat	Protospacer
* * .* ******.****** *********

29. spacer 1.6|22236|30|NZ_ALTZ01000023|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP047439 (Spiroplasma citri strain BLH-MB plasmid pSciBLHMB-2, complete sequence) position: , mismatch: 6, identity: 0.8

acaagataatttagtaatttaggaaaatat	CRISPR spacer
aaataaaaatttaataattttggaaaatat	Protospacer
* * .* ******.****** *********

30. spacer 1.6|22236|30|NZ_ALTZ01000023|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP047440 (Spiroplasma citri strain BLH-MB plasmid pSciBLHMB-3, complete sequence) position: , mismatch: 6, identity: 0.8

acaagataatttagtaatttaggaaaatat	CRISPR spacer
aaataaaaatttaataattttggaaaatat	Protospacer
* * .* ******.****** *********

31. spacer 1.6|22236|30|NZ_ALTZ01000023|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP047427 (Spiroplasma citri strain C189 plasmid pScpC189-1, complete sequence) position: , mismatch: 6, identity: 0.8

acaagataatttagtaatttaggaaaatat	CRISPR spacer
aaataaaaatttaataattttggaaaatat	Protospacer
* * .* ******.****** *********

32. spacer 1.6|22236|30|NZ_ALTZ01000023|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP053310 (Spiroplasma citri strain C5 plasmid pScpC5-6, complete sequence) position: , mismatch: 6, identity: 0.8

acaagataatttagtaatttaggaaaatat	CRISPR spacer
aaataaaaatttaataattttggaaaatat	Protospacer
* * .* ******.****** *********

33. spacer 1.6|22236|30|NZ_ALTZ01000023|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP042474 (Spiroplasma citri strain CC-2 plasmid pScpCC2-2, complete sequence) position: , mismatch: 6, identity: 0.8

acaagataatttagtaatttaggaaaatat	CRISPR spacer
aaataaaaatttaataattttggaaaatat	Protospacer
* * .* ******.****** *********

34. spacer 1.1|21906|30|NZ_ALTZ01000023|CRT matches to NZ_CP009254 (Buchnera aphidicola (Aphis glycines) strain BAg plasmid pLeu clone SA-pLeu, complete sequence) position: , mismatch: 7, identity: 0.767

ctagtatcagatttatatttaaaagctaga	CRISPR spacer
gaagtaacatatttatatttaaaaggaaaa	Protospacer
  **** ** ***************  *.*

35. spacer 1.4|22104|30|NZ_ALTZ01000023|CRT,PILER-CR,CRISPRCasFinder matches to NC_011256 (Borrelia duttonii Ly plasmid pl70, complete sequence) position: , mismatch: 7, identity: 0.767

gaaatggtttcaacaatgtttgataatcaa	CRISPR spacer
cagcttctttcaacaattttttataatcaa	Protospacer
 *. *  ********** *** ********

36. spacer 1.4|22104|30|NZ_ALTZ01000023|CRT,PILER-CR,CRISPRCasFinder matches to JN638751 (Bacillus phage G, complete genome) position: , mismatch: 7, identity: 0.767

gaaatggtttcaacaatgtttgataatcaa	CRISPR spacer
gaaaaggtttcaacaatggttgaagaaaag	Protospacer
**** ************* **** .*  *.

37. spacer 1.5|22170|30|NZ_ALTZ01000023|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP034165 (Escherichia albertii strain 2014C-4015 plasmid p2014C-4015-1, complete sequence) position: , mismatch: 7, identity: 0.767

ggatttttattgtcgactgctttattaaaa	CRISPR spacer
ggttttttattgtcgacggctttttgtgca	Protospacer
** ************** ***** *  . *

38. spacer 1.6|22236|30|NZ_ALTZ01000023|CRT,PILER-CR,CRISPRCasFinder matches to NC_007930 (Lactobacillus salivarius UCC118 plasmid pMP118, complete sequence) position: , mismatch: 7, identity: 0.767

acaagataatttagtaatttaggaaaatat	CRISPR spacer
tgatgataatttagtaattaagggaaacaa	Protospacer
  * *************** ***.***.*

39. spacer 1.6|22236|30|NZ_ALTZ01000023|CRT,PILER-CR,CRISPRCasFinder matches to CP002037 (Lactobacillus salivarius CECT 5713 plasmid pHN3, complete sequence) position: , mismatch: 7, identity: 0.767

acaagataatttagtaatttaggaaaatat	CRISPR spacer
tgatgataatttagtaattaagggaaacaa	Protospacer
  * *************** ***.***.*

40. spacer 1.1|21906|30|NZ_ALTZ01000023|CRT matches to KT878766 (Staphylococcus phage P1105, complete genome) position: , mismatch: 8, identity: 0.733

ctagtatcagatttatatttaaaagctaga	CRISPR spacer
ttagtatcagattaatatttaaagttatta	Protospacer
.************ *********. .   *

41. spacer 1.1|21906|30|NZ_ALTZ01000023|CRT matches to AY508486 (Bacteriophage 77, complete genome) position: , mismatch: 8, identity: 0.733

ctagtatcagatttatatttaaaagctaga	CRISPR spacer
ttagtatcagattaatatttaaagttatta	Protospacer
.************ *********. .   *

42. spacer 1.1|21906|30|NZ_ALTZ01000023|CRT matches to NC_005356 (Staphylococcus phage 77, complete genome) position: , mismatch: 8, identity: 0.733

ctagtatcagatttatatttaaaagctaga	CRISPR spacer
ttagtatcagattaatatttaaagttatta	Protospacer
.************ *********. .   *

43. spacer 1.1|21906|30|NZ_ALTZ01000023|CRT matches to NC_048681 (Staphylococcus phage phiSa2wa_st22, complete genome) position: , mismatch: 8, identity: 0.733

ctagtatcagatttatatttaaaagctaga	CRISPR spacer
ttagtatcagattaatatttaaagttatta	Protospacer
.************ *********. .   *

44. spacer 1.1|21906|30|NZ_ALTZ01000023|CRT matches to MG029512 (Staphylococcus phage phiSa2wa_st59, complete genome) position: , mismatch: 8, identity: 0.733

ctagtatcagatttatatttaaaagctaga	CRISPR spacer
ttagtatcagattaatatttaaagttatta	Protospacer
.************ *********. .   *

45. spacer 1.1|21906|30|NZ_ALTZ01000023|CRT matches to GQ398772 (Staphylococcus phage P954, complete genome) position: , mismatch: 8, identity: 0.733

ctagtatcagatttatatttaaaagctaga	CRISPR spacer
ttagtatcagattaatatttaaagttatta	Protospacer
.************ *********. .   *

46. spacer 1.1|21906|30|NZ_ALTZ01000023|CRT matches to KF831354 (Staphylococcus phage phiBU01, complete genome) position: , mismatch: 8, identity: 0.733

ctagtatcagatttatatttaaaagctaga	CRISPR spacer
ttagtatcagattaatatttaaagttatta	Protospacer
.************ *********. .   *

47. spacer 1.1|21906|30|NZ_ALTZ01000023|CRT matches to NC_048710 (Staphylococcus phage SA1014ruMSSAST7, complete genome) position: , mismatch: 8, identity: 0.733

ctagtatcagatttatatttaaaagctaga	CRISPR spacer
ttagtatcagattaatatttaaagttatta	Protospacer
.************ *********. .   *

48. spacer 1.1|21906|30|NZ_ALTZ01000023|CRT matches to AP011955 (Staphylococcus phage phi5967PVL DNA, complete genome) position: , mismatch: 8, identity: 0.733

ctagtatcagatttatatttaaaagctaga	CRISPR spacer
ttagtatcagattaatatttaaagttatta	Protospacer
.************ *********. .   *

49. spacer 1.1|21906|30|NZ_ALTZ01000023|CRT matches to DQ530361 (Staphylococcus aureus phage phiNM3, complete genome) position: , mismatch: 8, identity: 0.733

ctagtatcagatttatatttaaaagctaga	CRISPR spacer
ttagtatcagattaatatttaaagttatta	Protospacer
.************ *********. .   *

50. spacer 1.1|21906|30|NZ_ALTZ01000023|CRT matches to NC_025460 (Staphylococcus phage phiSa119, complete genome) position: , mismatch: 8, identity: 0.733

ctagtatcagatttatatttaaaagctaga	CRISPR spacer
ttagtatcagattaatatttaaagttatta	Protospacer
.************ *********. .   *

51. spacer 1.1|21906|30|NZ_ALTZ01000023|CRT matches to KJ452292 (Staphylococcus phage 23MRA, complete genome) position: , mismatch: 8, identity: 0.733

ctagtatcagatttatatttaaaagctaga	CRISPR spacer
ttagtatcagattaatatttaaagttatta	Protospacer
.************ *********. .   *

52. spacer 1.1|21906|30|NZ_ALTZ01000023|CRT matches to NC_023499 (Staphylococcus phage StauST398-4, complete genome) position: , mismatch: 8, identity: 0.733

ctagtatcagatttatatttaaaagctaga	CRISPR spacer
ttagtatcagattaatatttaaagttatta	Protospacer
.************ *********. .   *

53. spacer 1.1|21906|30|NZ_ALTZ01000023|CRT matches to NC_048635 (Staphylococcus phage P630, complete genome) position: , mismatch: 8, identity: 0.733

ctagtatcagatttatatttaaaagctaga	CRISPR spacer
ttagtatcagattaatatttaaagttatta	Protospacer
.************ *********. .   *

54. spacer 1.1|21906|30|NZ_ALTZ01000023|CRT matches to NC_048713 (Staphylococcus aureus phage SA345ruMSSAST8, complete genome) position: , mismatch: 8, identity: 0.733

ctagtatcagatttatatttaaaagctaga	CRISPR spacer
ttagtatcagattaatatttaaagttatta	Protospacer
.************ *********. .   *

55. spacer 1.1|21906|30|NZ_ALTZ01000023|CRT matches to NC_048634 (Staphylococcus phage P282, complete genome) position: , mismatch: 8, identity: 0.733

ctagtatcagatttatatttaaaagctaga	CRISPR spacer
ttagtatcagattaatatttaaagttatta	Protospacer
.************ *********. .   *

56. spacer 1.1|21906|30|NZ_ALTZ01000023|CRT matches to AP011956 (Staphylococcus phage phi7247PVL DNA, complete genome) position: , mismatch: 8, identity: 0.733

ctagtatcagatttatatttaaaagctaga	CRISPR spacer
ttagtatcagattaatatttaaagttatta	Protospacer
.************ *********. .   *

57. spacer 1.1|21906|30|NZ_ALTZ01000023|CRT matches to NC_008617 (Staphylococcus phage phiNM3, complete genome) position: , mismatch: 8, identity: 0.733

ctagtatcagatttatatttaaaagctaga	CRISPR spacer
ttagtatcagattaatatttaaagttatta	Protospacer
.************ *********. .   *

58. spacer 1.1|21906|30|NZ_ALTZ01000023|CRT matches to NC_048657 (Staphylococcus phage IME1361_01, complete genome) position: , mismatch: 8, identity: 0.733

ctagtatcagatttatatttaaaagctaga	CRISPR spacer
ttagtatcagattaatatttaaagttatta	Protospacer
.************ *********. .   *

59. spacer 1.1|21906|30|NZ_ALTZ01000023|CRT matches to MK496812 (Capybara microvirus Cap3_SP_554, complete genome) position: , mismatch: 8, identity: 0.733

ctagtatcagatttatatttaaaagctaga	CRISPR spacer
ttagaatcagatttatatctaaaattagca	Protospacer
.*** *************.***** . . *

60. spacer 1.6|22236|30|NZ_ALTZ01000023|CRT,PILER-CR,CRISPRCasFinder matches to FM164764 (Stygiolobus rod-shaped virus, complete genome) position: , mismatch: 8, identity: 0.733

acaagataatttagtaatttaggaaaatat	CRISPR spacer
atttcctaatttaggaatttaggaaattag	Protospacer
*.    ******** *********** **

61. spacer 1.6|22236|30|NZ_ALTZ01000023|CRT,PILER-CR,CRISPRCasFinder matches to FM164764 (Stygiolobus rod-shaped virus, complete genome) position: , mismatch: 8, identity: 0.733

acaagataatttagtaatttaggaaaatat	CRISPR spacer
atttcctaatttaggaatttaggaaattag	Protospacer
*.    ******** *********** **

62. spacer 1.6|22236|30|NZ_ALTZ01000023|CRT,PILER-CR,CRISPRCasFinder matches to KP869105 (Escherichia coli O157 typing phage 7, partial genome) position: , mismatch: 8, identity: 0.733

acaagataatttagtaatttaggaaaatat	CRISPR spacer
atcaacacatttattaatttaggaaaataa	Protospacer
*. *.   ***** ***************

63. spacer 1.6|22236|30|NZ_ALTZ01000023|CRT,PILER-CR,CRISPRCasFinder matches to MN693395 (Marine virus AFVG_25M229, complete genome) position: , mismatch: 8, identity: 0.733

acaagataatttagtaatttaggaaaatat	CRISPR spacer
cagaccaaatttattaatttatgaaaatat	Protospacer
  .*   ****** ******* ********

64. spacer 1.6|22236|30|NZ_ALTZ01000023|CRT,PILER-CR,CRISPRCasFinder matches to MK327936 (Escherichia phage vB_EcoM_G2540, complete genome) position: , mismatch: 8, identity: 0.733

acaagataatttagtaatttaggaaaatat	CRISPR spacer
atcaacacatttattaatttaggaaaataa	Protospacer
*. *.   ***** ***************

65. spacer 1.6|22236|30|NZ_ALTZ01000023|CRT,PILER-CR,CRISPRCasFinder matches to MF001360 (Escherichia phage ECO4, partial genome) position: , mismatch: 8, identity: 0.733

acaagataatttagtaatttaggaaaatat	CRISPR spacer
atcaacacatttattaatttaggaaaataa	Protospacer
*. *.   ***** ***************

66. spacer 1.6|22236|30|NZ_ALTZ01000023|CRT,PILER-CR,CRISPRCasFinder matches to HM997020 (Escherichia phage wV7, complete genome) position: , mismatch: 8, identity: 0.733

acaagataatttagtaatttaggaaaatat	CRISPR spacer
atcaacacatttattaatttaggaaaataa	Protospacer
*. *.   ***** ***************

67. spacer 1.7|22302|30|NZ_ALTZ01000023|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP013941 (Cronobacter malonaticus LMG 23826 plasmid pCMA1, complete sequence) position: , mismatch: 8, identity: 0.733

tcctcacgacggataaagcgtaaaagatct	CRISPR spacer
agttcacgacggataaaacgtaaataaacg	Protospacer
  .**************.****** .* *

68. spacer 1.7|22302|30|NZ_ALTZ01000023|CRT,PILER-CR,CRISPRCasFinder matches to NC_023024 (Cronobacter malonaticus plasmid p1, complete sequence) position: , mismatch: 8, identity: 0.733

tcctcacgacggataaagcgtaaaagatct	CRISPR spacer
agttcacgacggataaaacgtaaataaacg	Protospacer
  .**************.****** .* *

69. spacer 1.1|21906|30|NZ_ALTZ01000023|CRT matches to NZ_CP028891 (Borrelia turcica IST7 plasmid lp27, complete sequence) position: , mismatch: 9, identity: 0.7

ctagtatcagatttatatttaaaagctaga	CRISPR spacer
tcagtatcagatttatctttaaataattcc	Protospacer
..************** ****** . *

70. spacer 1.1|21906|30|NZ_ALTZ01000023|CRT matches to NC_004740 (Staphylococcus prophage phiN315, complete genome) position: , mismatch: 9, identity: 0.7

ctagtatcagatttatatttaaaagctaga	CRISPR spacer
ttagtatcagattaatatttaaggttatta	Protospacer
.************ ********.. .   *

71. spacer 1.4|22104|30|NZ_ALTZ01000023|CRT,PILER-CR,CRISPRCasFinder matches to MK448824 (Streptococcus phage Javan637, complete genome) position: , mismatch: 9, identity: 0.7

gaaatggtttcaacaatgtttgataatcaa	CRISPR spacer
tttcatatttcaacaaagtttgataatgaa	Protospacer
      .********* ********** **

72. spacer 1.4|22104|30|NZ_ALTZ01000023|CRT,PILER-CR,CRISPRCasFinder matches to MK449002 (Streptococcus phage Javan642, complete genome) position: , mismatch: 9, identity: 0.7

gaaatggtttcaacaatgtttgataatcaa	CRISPR spacer
tttcatatttcaacaaagtttgataatgaa	Protospacer
      .********* ********** **

73. spacer 1.4|22104|30|NZ_ALTZ01000023|CRT,PILER-CR,CRISPRCasFinder matches to MK449003 (Streptococcus phage Javan648, complete genome) position: , mismatch: 9, identity: 0.7

gaaatggtttcaacaatgtttgataatcaa	CRISPR spacer
tttcatatttcaacaaagtttgataatgaa	Protospacer
      .********* ********** **

74. spacer 1.5|22170|30|NZ_ALTZ01000023|CRT,PILER-CR,CRISPRCasFinder matches to NZ_LR214999 (Mycoplasma conjunctivae strain NCTC10147 plasmid 3) position: , mismatch: 9, identity: 0.7

ggatttttattgtcgactgctttattaaaa	CRISPR spacer
taggttttattgttgacggctttattagtg	Protospacer
 .. *********.*** *********. .

75. spacer 1.5|22170|30|NZ_ALTZ01000023|CRT,PILER-CR,CRISPRCasFinder matches to LR214965 (Mycoplasma fermentans strain NCTC10117 genome assembly, plasmid: 11) position: , mismatch: 9, identity: 0.7

ggatttttattgtcgactgctttattaaaa	CRISPR spacer
taggttttattgttgacggctttattagtg	Protospacer
 .. *********.*** *********. .

76. spacer 1.5|22170|30|NZ_ALTZ01000023|CRT,PILER-CR,CRISPRCasFinder matches to NC_019957 (Mycobacterium sp. JS623 plasmid pMYCSM01, complete sequence) position: , mismatch: 9, identity: 0.7

ggatttttattgtcgactgctttattaaaa	CRISPR spacer
ccattattattgccgactgctttatgtggt	Protospacer
  *** ******.************  ..

77. spacer 1.6|22236|30|NZ_ALTZ01000023|CRT,PILER-CR,CRISPRCasFinder matches to AJ344259 (Sulfolobus virus SIRV-2 genomic DNA) position: , mismatch: 9, identity: 0.7

acaagataatttagtaatttaggaaaatat	CRISPR spacer
tatcaataatttaataatttatgaaaatta	Protospacer
    .********.******* ******

78. spacer 1.1|21906|30|NZ_ALTZ01000023|CRT matches to NC_004758 (Neisseria meningitidis plasmid pJS-B, complete sequence) position: , mismatch: 10, identity: 0.667

ctagtatcagatttatatttaaaagctaga	CRISPR spacer
gacatatcagatttaaatttaaaagaccct	Protospacer
   .*********** ********* .

79. spacer 1.1|21906|30|NZ_ALTZ01000023|CRT matches to ADWM02000138 (Neisseria meningitidis K1207 plasmid, complete sequence, whole genome shotgun sequence) position: , mismatch: 10, identity: 0.667

ctagtatcagatttatatttaaaagctaga	CRISPR spacer
gacatatcagatttaaatttaaaagaccct	Protospacer
   .*********** ********* .

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

8. NZ_ALTZ01000028

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

44357 : 56422

Gordonia_phage(14.29%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000783424.1\|44357_45662_-	LysM peptidoglycan-binding domain-containing protein	A0A0E3XB61	Gordonia_phage	4.6e-11	36.0
WP_001045908.1\|45808_46708_-	peptidoglycan DD-metalloendopeptidase family protein	A0A221J6U0	Arthrobacter_phage	4.1e-19	45.9
WP_000166558.1\|46900_48448_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	E3SNU8	Prochlorococcus_phage	4.4e-45	52.9
WP_000780020.1\|48467_49220_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_000685111.1\|49239_49791_-	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	1.8e-25	35.6
WP_001291325.1\|49958_50981_-	phosphoribosylformylglycinamidine cyclo-ligase	A0A1D7SE90	Cyanophage	9.6e-65	44.6
WP_000220672.1\|51008_52463_-	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	6.3e-54	32.5
WP_001042263.1\|52696_56422_-	phosphoribosylformylglycinamidine synthase	A6N228	Microbacterium_phage	1.6e-40	27.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

9. NZ_ALTZ01000008

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1075 : 14051

Streptococcus_phage(58.33%)

integrase

attL 952:971|attR 14886:14905

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
952:971	attL	NA	NA	NA	NA
WP_000605382.1\|1075_2248_-\|integrase	site-specific integrase	A0A1X9I5Y5	Streptococcus_phage	4.3e-154	70.4
WP_000429449.1\|2580_3546_-	DUF3644 domain-containing protein	A0A0N9RUA4	Staphylococcus_phage	7.1e-86	51.1
WP_000350953.1\|3572_3914_-	hypothetical protein	A0A1S5SDB5	Streptococcus_phage	2.2e-13	59.7
WP_000876115.1\|3925_4111_-	hypothetical protein	NA	NA	NA	NA
WP_001137532.1\|4606_4816_-	TM2 domain-containing protein	M4ZS56	Bacillus_phage	4.9e-08	55.8
WP_000906796.1\|4920_5613_-	helix-turn-helix transcriptional regulator	A0A0P0IV68	Lactobacillus_phage	4.3e-08	49.2
WP_017644534.1\|5778_5940_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_000845516.1\|5993_6614_+	phage repressor protein	A0A1W6JPC3	Staphylococcus_phage	1.4e-39	42.3
WP_001261785.1\|6613_6883_+	hypothetical protein	NA	NA	NA	NA
WP_000877492.1\|7137_7470_+	hypothetical protein	NA	NA	NA	NA
WP_025194473.1\|7593_7785_+	hypothetical protein	NA	NA	NA	NA
WP_000206024.1\|7796_8159_+	hypothetical protein	NA	NA	NA	NA
WP_000174504.1\|8155_8497_+	hypothetical protein	NA	NA	NA	NA
WP_000492120.1\|8489_8762_+	hypothetical protein	A0A1X9I5U9	Streptococcus_phage	2.5e-28	69.8
WP_000838178.1\|9641_11144_+	DNA primase	Q9AZI5	Lactococcus_phage	2.7e-63	37.2
WP_000694577.1\|11403_11577_+	hypothetical protein	A0A1X9I5U0	Streptococcus_phage	1.9e-10	59.6
WP_001258774.1\|11760_12366_+	hypothetical protein	A0A1X9I5U4	Streptococcus_phage	7.0e-39	46.8
WP_000661535.1\|12450_12939_+	hypothetical protein	A0A1X9I5V2	Streptococcus_phage	1.2e-46	56.2
WP_000500997.1\|13336_13699_+	DUF1492 domain-containing protein	NA	NA	NA	NA
WP_060474137.1\|13673_14051_+	DUF1492 domain-containing protein	A0A1L2JXS9	Streptococcus_phage	1.0e-08	37.4
14886:14905	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

10. NZ_ALTZ01000016

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr_ID: NZ_ALTZ01000016.1|WP_000384271.1|15282_15609_-|hypothetical-protein

Click the colored protein region to show detailed information

Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_ALTZ01000016.1|WP_000384271.1|15282_15609_-|hypothetical-protein

15282_15609_-

108 aa aa

AcrIIA21

hit_Aca_id	identity	query_coverage	hit_coverage
anti_CRISPR3639\|WP_000384271.1\|AcrIIA21\|II-A\|Verified\|Streptococcus	1.0	1	1.0