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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_KK020677 Pseudomonas stutzeri KOS6 scaffold3, whole genome shotgun sequence 0 crisprs WYL,DEDDh,RT 0 0 2 0
NZ_KK020678 Pseudomonas stutzeri KOS6 scaffold4, whole genome shotgun sequence 0 crisprs cas3,DinG,csa3 0 0 1 0
NZ_KK020675 Pseudomonas stutzeri KOS6 scaffold1, whole genome shotgun sequence 0 crisprs cas3 0 0 1 0
NZ_KK020679 Pseudomonas stutzeri KOS6 scaffold5, whole genome shotgun sequence 0 crisprs NA 0 0 0 0
NZ_KK020676 Pseudomonas stutzeri KOS6 scaffold2, whole genome shotgun sequence 6 crisprs cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,csa3,DinG 1 13 5 2

Results visualization

1. NZ_KK020676
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_KK020676_1 209016-209262 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_KK020676_2 423094-423671 TypeI-E I-E
9 spacers
cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_KK020676_3 424206-424968 TypeI-E I-E
12 spacers
cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_KK020676_4 434713-434802 TypeI-E I-E
1 spacers
cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_KK020676_5 2366396-2366522 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_KK020676_6 2439974-2440146 Orphan NA
2 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_KK020676_1 1.2|209187|47|NZ_KK020676|PILER-CR 209187-209233 47 NZ_KK020676.1 210025-210071 0 1.0

1. spacer 1.2|209187|47|NZ_KK020676|PILER-CR matches to position: 210025-210071, mismatch: 0, identity: 1.0 

gtgctgtggggccaactcgttcgccgacttcaaacctcgaaagctcg	CRISPR spacer
gtgctgtggggccaactcgttcgccgacttcaaacctcgaaagctcg	Protospacer
***********************************************

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_KK020676_3 3.11|424846|32|NZ_KK020676|CRT,PILER-CR,CRISPRCasFinder 424846-424877 32 AP014684 Pseudomonas phage PS-1 DNA, complete sequence 24341-24372 1 0.969
NZ_KK020676_3 3.11|424846|32|NZ_KK020676|CRT,PILER-CR,CRISPRCasFinder 424846-424877 32 MF417879 Uncultured Caudovirales phage clone 3S_11, partial genome 19460-19491 2 0.938
NZ_KK020676_3 3.7|424601|32|NZ_KK020676|CRT,PILER-CR,CRISPRCasFinder 424601-424632 32 MH576962 Streptomyces phage Satis, complete genome 99955-99986 5 0.844
NZ_KK020676_3 3.7|424601|32|NZ_KK020676|CRT,PILER-CR,CRISPRCasFinder 424601-424632 32 MK620894 Streptomyces phage Kradal, complete genome 99959-99990 5 0.844
NZ_KK020676_2 2.1|423123|30|NZ_KK020676|CRT 423123-423152 30 NZ_CP049157 Caballeronia sp. SBC1 plasmid pSBC1_1, complete sequence 993886-993915 6 0.8
NZ_KK020676_2 2.1|423123|30|NZ_KK020676|CRT 423123-423152 30 NZ_CP049317 Caballeronia sp. SBC2 plasmid pSBC2-1, complete sequence 650527-650556 6 0.8
NZ_KK020676_2 2.3|423243|32|NZ_KK020676|CRT,CRISPRCasFinder 423243-423274 32 NZ_CP049244 Rhizobium pseudoryzae strain DSM 19479 plasmid unnamed3, complete sequence 701926-701957 6 0.812
NZ_KK020676_2 2.4|423304|32|NZ_KK020676|CRT,CRISPRCasFinder 423304-423335 32 NZ_CP039697 Novosphingobium sp. ABRDHK2 plasmid pABRDHK22, complete sequence 547299-547330 6 0.812
NZ_KK020676_2 2.1|423123|30|NZ_KK020676|CRT 423123-423152 30 NZ_CP015065 Mesorhizobium ciceri biovar biserrulae strain WSM1284 plasmid pMc1284, complete sequence 334328-334357 7 0.767
NZ_KK020676_2 2.1|423123|30|NZ_KK020676|CRT 423123-423152 30 NZ_CP015063 Mesorhizobium ciceri strain CC1192 plasmid pMc1192, complete sequence 352327-352356 7 0.767
NZ_KK020676_2 2.1|423123|30|NZ_KK020676|CRT 423123-423152 30 NZ_CP025188 Roseomonas mucosa strain AD2 plasmid p1-AD2, complete sequence 209129-209158 7 0.767
NZ_KK020676_2 2.3|423243|32|NZ_KK020676|CRT,CRISPRCasFinder 423243-423274 32 NZ_CP019319 Tateyamaria omphalii strain DOK1-4 plasmid pDOK1-4-7, complete sequence 38670-38701 7 0.781
NZ_KK020676_2 2.3|423243|32|NZ_KK020676|CRT,CRISPRCasFinder 423243-423274 32 NZ_CP018784 Curtobacterium pusillum strain AA3 plasmid pCPAA3, complete sequence 179216-179247 7 0.781
NZ_KK020676_2 2.3|423243|32|NZ_KK020676|CRT,CRISPRCasFinder 423243-423274 32 CP053333 Salmonella enterica subsp. diarizonae serovar 47:k:z35 strain 2009K1094 plasmid unnamed1, complete sequence 160260-160291 7 0.781
NZ_KK020676_2 2.10|423243|33|NZ_KK020676|PILER-CR 423243-423275 33 NZ_CP019319 Tateyamaria omphalii strain DOK1-4 plasmid pDOK1-4-7, complete sequence 38669-38701 7 0.788
NZ_KK020676_3 3.3|424357|32|NZ_KK020676|CRT,PILER-CR,CRISPRCasFinder 424357-424388 32 NC_015377 Burkholderia gladioli BSR3 plasmid bgla_2p, complete sequence 28091-28122 7 0.781
NZ_KK020676_3 3.3|424357|32|NZ_KK020676|CRT,PILER-CR,CRISPRCasFinder 424357-424388 32 NZ_CP029777 Deinococcus actinosclerus strain Deinococcus actinosclerus SJTR plasmid unnamed3, complete sequence 232422-232453 7 0.781
NZ_KK020676_3 3.3|424357|32|NZ_KK020676|CRT,PILER-CR,CRISPRCasFinder 424357-424388 32 NZ_CP033429 Burkholderia gladioli strain Burkholderia gladioli Co14 plasmid p1, complete sequence 89804-89835 7 0.781
NZ_KK020676_3 3.5|424479|32|NZ_KK020676|CRT,PILER-CR,CRISPRCasFinder 424479-424510 32 MF477236 Nocardia phage NTR1, complete genome 40695-40726 7 0.781
NZ_KK020676_3 3.5|424479|32|NZ_KK020676|CRT,PILER-CR,CRISPRCasFinder 424479-424510 32 NZ_CP013855 Pseudonocardia sp. HH130630-07 plasmid pLS2-1, complete sequence 74684-74715 7 0.781
NZ_KK020676_3 3.5|424479|32|NZ_KK020676|CRT,PILER-CR,CRISPRCasFinder 424479-424510 32 NZ_CP045120 Rubrobacter sp. SCSIO 52909 plasmid unnamed1, complete sequence 161546-161577 7 0.781
NZ_KK020676_3 3.11|424846|32|NZ_KK020676|CRT,PILER-CR,CRISPRCasFinder 424846-424877 32 NC_016113 Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence 1599860-1599891 7 0.781
NZ_KK020676_3 3.11|424846|32|NZ_KK020676|CRT,PILER-CR,CRISPRCasFinder 424846-424877 32 NC_017585 Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence 213401-213432 7 0.781
NZ_KK020676_3 3.11|424846|32|NZ_KK020676|CRT,PILER-CR,CRISPRCasFinder 424846-424877 32 NZ_CP023738 Methylosinus trichosporium OB3b plasmid pOB3b1, complete sequence 150989-151020 7 0.781
NZ_KK020676_3 3.11|424846|32|NZ_KK020676|CRT,PILER-CR,CRISPRCasFinder 424846-424877 32 GQ303259 Mycobacterium phage Colbert, complete genome 40097-40128 7 0.781
NZ_KK020676_2 2.1|423123|30|NZ_KK020676|CRT 423123-423152 30 NZ_CP054032 Rhizobium sp. JKLM13E plasmid pPR13E01, complete sequence 899054-899083 8 0.733
NZ_KK020676_2 2.3|423243|32|NZ_KK020676|CRT,CRISPRCasFinder 423243-423274 32 NZ_CP021236 Pontibacter actiniarum strain DSM 19842 plasmid unnamed, complete sequence 179721-179752 8 0.75
NZ_KK020676_2 2.4|423304|32|NZ_KK020676|CRT,CRISPRCasFinder 423304-423335 32 NC_015170 Deinococcus proteolyticus MRP plasmid pDEIPR03, complete sequence 127747-127778 8 0.75
NZ_KK020676_2 2.6|423426|32|NZ_KK020676|CRT,CRISPRCasFinder 423426-423457 32 NZ_CP045339 Vibrio sp. THAF190c plasmid pTHAF190c_a, complete sequence 13812-13843 8 0.75
NZ_KK020676_2 2.13|423426|33|NZ_KK020676|PILER-CR 423426-423458 33 NZ_CP045339 Vibrio sp. THAF190c plasmid pTHAF190c_a, complete sequence 13811-13843 8 0.758
NZ_KK020676_3 3.1|424235|32|NZ_KK020676|CRT 424235-424266 32 NZ_CP015038 Burkholderia cenocepacia strain 895 plasmid pBcp895-1, complete sequence 179220-179251 8 0.75
NZ_KK020676_3 3.1|424235|32|NZ_KK020676|CRT 424235-424266 32 NZ_CP015032 Burkholderia cenocepacia strain 842 plasmid pBcn842-1, complete sequence 15957-15988 8 0.75
NZ_KK020676_3 3.1|424235|32|NZ_KK020676|CRT 424235-424266 32 NZ_CP028965 Burkholderia sp. IDO3 plasmid p1, complete sequence 43635-43666 8 0.75
NZ_KK020676_3 3.1|424235|32|NZ_KK020676|CRT 424235-424266 32 MK931444 Klebsiella phage Skenny, complete genome 8725-8756 8 0.75
NZ_KK020676_3 3.3|424357|32|NZ_KK020676|CRT,PILER-CR,CRISPRCasFinder 424357-424388 32 NZ_LT703510 Mycobacterium chimaera strain Mycobacterium chimaera MC045 isolate Mycobacterium chimaera plasmid 6 18579-18610 8 0.75
NZ_KK020676_3 3.3|424357|32|NZ_KK020676|CRT,PILER-CR,CRISPRCasFinder 424357-424388 32 NZ_CP015275 Mycobacterium chimaera strain ZUERICH-1 plasmid unnamed 3, complete sequence 22736-22767 8 0.75
NZ_KK020676_3 3.3|424357|32|NZ_KK020676|CRT,PILER-CR,CRISPRCasFinder 424357-424388 32 NZ_CP019222 Mycobacterium chimaera strain CDC 2015-22-71 plasmid pDHQP20152271_3, complete sequence 16100-16131 8 0.75
NZ_KK020676_3 3.3|424357|32|NZ_KK020676|CRT,PILER-CR,CRISPRCasFinder 424357-424388 32 NZ_CP045966 Mycobacterium chimaera strain AUSMDU00007395 plasmid pAUSMDU00007395_03, complete sequence 17049-17080 8 0.75
NZ_KK020676_3 3.3|424357|32|NZ_KK020676|CRT,PILER-CR,CRISPRCasFinder 424357-424388 32 NZ_CP016082 Streptomyces sp. SAT1 plasmid unnamed2, complete sequence 19524-19555 8 0.75
NZ_KK020676_3 3.3|424357|32|NZ_KK020676|CRT,PILER-CR,CRISPRCasFinder 424357-424388 32 NZ_CP013515 Rhizobium sp. N1314 plasmid pRspN1314d, complete sequence 289767-289798 8 0.75
NZ_KK020676_3 3.3|424357|32|NZ_KK020676|CRT,PILER-CR,CRISPRCasFinder 424357-424388 32 NC_011984 Agrobacterium vitis S4 plasmid pAtS4c, complete sequence 96911-96942 8 0.75
NZ_KK020676_3 3.3|424357|32|NZ_KK020676|CRT,PILER-CR,CRISPRCasFinder 424357-424388 32 NZ_CP013605 Rhizobium sp. N731 plasmid pRspN731d, complete sequence 289761-289792 8 0.75
NZ_KK020676_3 3.5|424479|32|NZ_KK020676|CRT,PILER-CR,CRISPRCasFinder 424479-424510 32 NZ_CP052758 Cellulosimicrobium sp. BI34T plasmid pCPRO01, complete sequence 140690-140721 8 0.75
NZ_KK020676_3 3.5|424479|32|NZ_KK020676|CRT,PILER-CR,CRISPRCasFinder 424479-424510 32 NC_016907 Gordonia polyisoprenivorans VH2 plasmid p174, complete sequence 77042-77073 8 0.75
NZ_KK020676_3 3.7|424601|32|NZ_KK020676|CRT,PILER-CR,CRISPRCasFinder 424601-424632 32 NC_016113 Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence 126713-126744 8 0.75
NZ_KK020676_3 3.7|424601|32|NZ_KK020676|CRT,PILER-CR,CRISPRCasFinder 424601-424632 32 NC_017585 Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence 1686404-1686435 8 0.75
NZ_KK020676_3 3.11|424846|32|NZ_KK020676|CRT,PILER-CR,CRISPRCasFinder 424846-424877 32 NZ_CP017303 Rhodococcus sp. YL-1 plasmid pYLL1 sequence 48049-48080 8 0.75
NZ_KK020676_2 2.1|423123|30|NZ_KK020676|CRT 423123-423152 30 NZ_CP016291 Rhizobium leguminosarum strain Vaf10 plasmid unnamed6, complete sequence 224610-224639 9 0.7
NZ_KK020676_2 2.1|423123|30|NZ_KK020676|CRT 423123-423152 30 NZ_CP029356 Azospirillum sp. CFH 70021 plasmid unnamed1 366669-366698 9 0.7
NZ_KK020676_2 2.1|423123|30|NZ_KK020676|CRT 423123-423152 30 NZ_CP022568 Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK04, complete sequence 162840-162869 9 0.7
NZ_KK020676_2 2.2|423182|32|NZ_KK020676|CRT,CRISPRCasFinder 423182-423213 32 JX681814 Burkholderia phage phiX216, complete genome 34255-34286 9 0.719
NZ_KK020676_2 2.2|423182|32|NZ_KK020676|CRT,CRISPRCasFinder 423182-423213 32 DQ087285 Burkholderia pseudomallei phage phi52237, complete genome 9899-9930 9 0.719
NZ_KK020676_2 2.2|423182|32|NZ_KK020676|CRT,CRISPRCasFinder 423182-423213 32 NC_007145 Burkholderia prophage phi52237, complete genome 9899-9930 9 0.719
NZ_KK020676_2 2.2|423182|32|NZ_KK020676|CRT,CRISPRCasFinder 423182-423213 32 CP008753 Burkholderia phage BEK, complete genome 28160-28191 9 0.719
NZ_KK020676_2 2.3|423243|32|NZ_KK020676|CRT,CRISPRCasFinder 423243-423274 32 NZ_CP014127 Pantoea vagans strain FDAARGOS_160 plasmid unnamed2, complete sequence 409663-409694 9 0.719
NZ_KK020676_2 2.3|423243|32|NZ_KK020676|CRT,CRISPRCasFinder 423243-423274 32 NC_014258 Pantoea vagans C9-1 plasmid pPag3, complete sequence 198156-198187 9 0.719
NZ_KK020676_2 2.3|423243|32|NZ_KK020676|CRT,CRISPRCasFinder 423243-423274 32 NZ_CP014308 Burkholderia sp. PAMC 26561 plasmid unnamed1, complete sequence 519820-519851 9 0.719
NZ_KK020676_2 2.3|423243|32|NZ_KK020676|CRT,CRISPRCasFinder 423243-423274 32 NZ_CP014309 Burkholderia sp. PAMC 26561 plasmid unnamed2, complete sequence 315274-315305 9 0.719
NZ_KK020676_2 2.4|423304|32|NZ_KK020676|CRT,CRISPRCasFinder 423304-423335 32 NZ_CP013381 Burkholderia sp. Bp5365 strain MSMB43 plasmid pMSMB43, complete sequence 2863-2894 9 0.719
NZ_KK020676_2 2.4|423304|32|NZ_KK020676|CRT,CRISPRCasFinder 423304-423335 32 NZ_CP009547 Burkholderia sp. 2002721687 plasmid pBTU, complete sequence 114995-115026 9 0.719
NZ_KK020676_2 2.4|423304|32|NZ_KK020676|CRT,CRISPRCasFinder 423304-423335 32 NZ_CP010421 Azotobacter chroococcum NCIMB 8003 plasmid pAcX50f, complete sequence 66511-66542 9 0.719
NZ_KK020676_2 2.4|423304|32|NZ_KK020676|CRT,CRISPRCasFinder 423304-423335 32 NZ_CP054621 Azospirillum oryzae strain KACC 14407 plasmid unnamed6, complete sequence 433919-433950 9 0.719
NZ_KK020676_2 2.4|423304|32|NZ_KK020676|CRT,CRISPRCasFinder 423304-423335 32 NZ_CP017076 Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence 45127-45158 9 0.719
NZ_KK020676_2 2.4|423304|32|NZ_KK020676|CRT,CRISPRCasFinder 423304-423335 32 NZ_CP028976 Cronobacter sakazakii strain GZcsf-1 plasmid pGW2, complete sequence 39949-39980 9 0.719
NZ_KK020676_2 2.4|423304|32|NZ_KK020676|CRT,CRISPRCasFinder 423304-423335 32 NZ_CP011048 Cronobacter sakazakii strain ATCC 29544 plasmid CSK29544_1p, complete sequence 63348-63379 9 0.719
NZ_KK020676_2 2.4|423304|32|NZ_KK020676|CRT,CRISPRCasFinder 423304-423335 32 MT270409 Phaeobacter phage MD18, complete genome 38467-38498 9 0.719
NZ_KK020676_2 2.4|423304|32|NZ_KK020676|CRT,CRISPRCasFinder 423304-423335 32 KR053199 Gordonia phage GMA4, complete genome 40624-40655 9 0.719
NZ_KK020676_2 2.11|423304|33|NZ_KK020676|PILER-CR 423304-423336 33 NC_015170 Deinococcus proteolyticus MRP plasmid pDEIPR03, complete sequence 127746-127778 9 0.727
NZ_KK020676_2 2.11|423304|33|NZ_KK020676|PILER-CR 423304-423336 33 NZ_CP054621 Azospirillum oryzae strain KACC 14407 plasmid unnamed6, complete sequence 433918-433950 9 0.727
NZ_KK020676_3 3.1|424235|32|NZ_KK020676|CRT 424235-424266 32 KY575286 UNVERIFIED: Klebsiella phage SH-Kp 160016, complete genome 13768-13799 9 0.719
NZ_KK020676_3 3.1|424235|32|NZ_KK020676|CRT 424235-424266 32 MH633486 Klebsiella phage NJS3, complete genome 8725-8756 9 0.719
NZ_KK020676_3 3.1|424235|32|NZ_KK020676|CRT 424235-424266 32 NC_049845 Klebsiella phage PhiKpNIH-2, complete genome 9065-9096 9 0.719
NZ_KK020676_3 3.1|424235|32|NZ_KK020676|CRT 424235-424266 32 MK618657 Klebsiella phage Sanco, complete genome 8266-8297 9 0.719
NZ_KK020676_3 3.1|424235|32|NZ_KK020676|CRT 424235-424266 32 NC_049842 Klebsiella phage vB_KpnS_15-38_KLPPOU149, complete genome 21003-21034 9 0.719
NZ_KK020676_3 3.1|424235|32|NZ_KK020676|CRT 424235-424266 32 MF415412 Klebsiella phage KPN N141, complete genome 21014-21045 9 0.719
NZ_KK020676_3 3.1|424235|32|NZ_KK020676|CRT 424235-424266 32 MF612072 Klebsiella phage MezzoGao, complete genome 44326-44357 9 0.719
NZ_KK020676_3 3.1|424235|32|NZ_KK020676|CRT 424235-424266 32 MT894005 Klebsiella phage MMBB, complete genome 18265-18296 9 0.719
NZ_KK020676_3 3.1|424235|32|NZ_KK020676|CRT 424235-424266 32 MK931445 Klebsiella phage Shelby, complete genome 8918-8949 9 0.719
NZ_KK020676_3 3.1|424235|32|NZ_KK020676|CRT 424235-424266 32 JF501022 Klebsiella phage KP36, complete genome 9912-9943 9 0.719
NZ_KK020676_3 3.1|424235|32|NZ_KK020676|CRT 424235-424266 32 KP658157 Klebsiella phage 1513, complete genome 17711-17742 9 0.719
NZ_KK020676_3 3.1|424235|32|NZ_KK020676|CRT 424235-424266 32 NC_049848 Klebsiella phage KP1801, complete genome 47936-47967 9 0.719
NZ_KK020676_3 3.1|424235|32|NZ_KK020676|CRT 424235-424266 32 MH633484 Klebsiella phage TAH8, complete genome 8919-8950 9 0.719
NZ_KK020676_3 3.1|424235|32|NZ_KK020676|CRT 424235-424266 32 MK931442 Klebsiella phage Sin4, complete genome 8728-8759 9 0.719
NZ_KK020676_3 3.1|424235|32|NZ_KK020676|CRT 424235-424266 32 NC_048043 Klebsiella phage NJS2, complete genome 9516-9547 9 0.719
NZ_KK020676_3 3.1|424235|32|NZ_KK020676|CRT 424235-424266 32 MK931443 Klebsiella phage Sweeny, complete genome 9231-9262 9 0.719
NZ_KK020676_3 3.1|424235|32|NZ_KK020676|CRT 424235-424266 32 NC_049838 Klebsiella phage KL, complete genome 6781-6812 9 0.719
NZ_KK020676_3 3.1|424235|32|NZ_KK020676|CRT 424235-424266 32 NC_049838 Klebsiella phage KL, complete genome 17586-17617 9 0.719
NZ_KK020676_3 3.1|424235|32|NZ_KK020676|CRT 424235-424266 32 MH844531 Klebsiella phage GH-K3, complete genome 40636-40667 9 0.719
NZ_KK020676_3 3.1|424235|32|NZ_KK020676|CRT 424235-424266 32 NC_048044 Klebsiella phage NJR15, complete genome 8757-8788 9 0.719
NZ_KK020676_3 3.1|424235|32|NZ_KK020676|CRT 424235-424266 32 MG894052 Klebsiella phage JY917, complete genome 37158-37189 9 0.719
NZ_KK020676_3 3.1|424235|32|NZ_KK020676|CRT 424235-424266 32 NC_048126 Klebsiella phage TSK1, complete genome 6655-6686 9 0.719
NZ_KK020676_3 3.1|424235|32|NZ_KK020676|CRT 424235-424266 32 NC_028774 Klebsiella phage Sushi, complete genome 631-662 9 0.719
NZ_KK020676_3 3.1|424235|32|NZ_KK020676|CRT 424235-424266 32 NC_049844 Klebsiella phage 13, complete genome 23104-23135 9 0.719
NZ_KK020676_3 3.3|424357|32|NZ_KK020676|CRT,PILER-CR,CRISPRCasFinder 424357-424388 32 EF579802 Microbacterium phage Min1, complete genome 24868-24899 9 0.719
NZ_KK020676_3 3.5|424479|32|NZ_KK020676|CRT,PILER-CR,CRISPRCasFinder 424479-424510 32 NZ_CP012183 Pseudonocardia sp. EC080610-09 plasmid pBCI2-2, complete sequence 114632-114663 9 0.719
NZ_KK020676_3 3.11|424846|32|NZ_KK020676|CRT,PILER-CR,CRISPRCasFinder 424846-424877 32 LR606148 Rhizobium sp. Q54 genome assembly, plasmid: 5 16896-16927 9 0.719
NZ_KK020676_3 3.11|424846|32|NZ_KK020676|CRT,PILER-CR,CRISPRCasFinder 424846-424877 32 NZ_CP018080 Sulfitobacter sp. AM1-D1 plasmid unnamed4, complete sequence 118722-118753 9 0.719
NZ_KK020676_2 2.2|423182|32|NZ_KK020676|CRT,CRISPRCasFinder 423182-423213 32 NZ_LT703507 Mycobacterium chimaera strain Mycobacterium chimaera MC045 isolate Mycobacterium chimaera plasmid 3 85238-85269 10 0.688
NZ_KK020676_2 2.2|423182|32|NZ_KK020676|CRT,CRISPRCasFinder 423182-423213 32 NZ_CP015280 Mycobacterium chimaera strain DSM 44623 plasmid unnamed 2, complete sequence 22868-22899 10 0.688
NZ_KK020676_2 2.2|423182|32|NZ_KK020676|CRT,CRISPRCasFinder 423182-423213 32 NZ_CP015273 Mycobacterium chimaera strain ZUERICH-1 plasmid unnamed 1, complete sequence 77463-77494 10 0.688
NZ_KK020676_2 2.2|423182|32|NZ_KK020676|CRT,CRISPRCasFinder 423182-423213 32 NZ_CP023153 Mycobacterium chimaera strain FLAC0070 plasmid pFLAC0070_2, complete sequence 10505-10536 10 0.688
NZ_KK020676_2 2.2|423182|32|NZ_KK020676|CRT,CRISPRCasFinder 423182-423213 32 NC_020275 Mycobacterium intracellulare subsp. yongonense 05-1390 plasmid pMyong1, complete sequence 62566-62597 10 0.688
NZ_KK020676_2 2.2|423182|32|NZ_KK020676|CRT,CRISPRCasFinder 423182-423213 32 NZ_CP029333 Mycobacterium avium subsp. hominissuis strain MAC109 plasmid pMAC109a, complete sequence 126213-126244 10 0.688
NZ_KK020676_2 2.2|423182|32|NZ_KK020676|CRT,CRISPRCasFinder 423182-423213 32 NZ_CP019224 Mycobacterium chimaera strain CDC 2015-22-71 plasmid pDHQP20152271_1, complete sequence 54030-54061 10 0.688
NZ_KK020676_2 2.2|423182|32|NZ_KK020676|CRT,CRISPRCasFinder 423182-423213 32 NZ_CP045964 Mycobacterium chimaera strain AUSMDU00007395 plasmid pAUSMDU00007395_01, complete sequence 68706-68737 10 0.688
NZ_KK020676_2 2.2|423182|32|NZ_KK020676|CRT,CRISPRCasFinder 423182-423213 32 NC_022654 Mycobacterium kansasii ATCC 12478 plasmid pMK12478, complete sequence 69246-69277 10 0.688
NZ_KK020676_2 2.4|423304|32|NZ_KK020676|CRT,CRISPRCasFinder 423304-423335 32 NC_019740 Microcoleus sp. PCC 7113 plasmid pMIC7113.03, complete sequence 30818-30849 10 0.688
NZ_KK020676_2 2.4|423304|32|NZ_KK020676|CRT,CRISPRCasFinder 423304-423335 32 NC_019740 Microcoleus sp. PCC 7113 plasmid pMIC7113.03, complete sequence 55434-55465 10 0.688
NZ_KK020676_2 2.11|423304|33|NZ_KK020676|PILER-CR 423304-423336 33 NZ_CP013381 Burkholderia sp. Bp5365 strain MSMB43 plasmid pMSMB43, complete sequence 2862-2894 10 0.697
NZ_KK020676_2 2.11|423304|33|NZ_KK020676|PILER-CR 423304-423336 33 NZ_CP009547 Burkholderia sp. 2002721687 plasmid pBTU, complete sequence 114995-115027 10 0.697
NZ_KK020676_2 2.11|423304|33|NZ_KK020676|PILER-CR 423304-423336 33 NZ_CP010421 Azotobacter chroococcum NCIMB 8003 plasmid pAcX50f, complete sequence 66511-66543 10 0.697
NZ_KK020676_3 3.1|424235|32|NZ_KK020676|CRT 424235-424266 32 NZ_CP025505 Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvC, complete sequence 45428-45459 10 0.688
NZ_KK020676_3 3.3|424357|32|NZ_KK020676|CRT,PILER-CR,CRISPRCasFinder 424357-424388 32 NZ_CP011297 Rhodococcus erythropolis strain BG43 plasmid pRLLBG43, complete sequence 200729-200760 10 0.688
NZ_KK020676_3 3.5|424479|32|NZ_KK020676|CRT,PILER-CR,CRISPRCasFinder 424479-424510 32 NZ_CP050083 Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b3, complete sequence 561376-561407 10 0.688
NZ_KK020676_3 3.5|424479|32|NZ_KK020676|CRT,PILER-CR,CRISPRCasFinder 424479-424510 32 NZ_CP049733 Rhizobium leguminosarum strain A1 plasmid pRL10, complete sequence 549064-549095 10 0.688
NZ_KK020676_3 3.5|424479|32|NZ_KK020676|CRT,PILER-CR,CRISPRCasFinder 424479-424510 32 NZ_CP053207 Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1C, complete sequence 578118-578149 10 0.688
NZ_KK020676_2 2.4|423304|32|NZ_KK020676|CRT,CRISPRCasFinder 423304-423335 32 NZ_CP031079 Paracoccus yeei strain CCUG 32053 plasmid pYEE1, complete sequence 382069-382100 11 0.656
NZ_KK020676_2 2.4|423304|32|NZ_KK020676|CRT,CRISPRCasFinder 423304-423335 32 KU160673 Arthrobacter phage Wilde, complete genome 12333-12364 11 0.656
NZ_KK020676_2 2.4|423304|32|NZ_KK020676|CRT,CRISPRCasFinder 423304-423335 32 KU160669 Arthrobacter phage Tank, complete genome 12405-12436 11 0.656
NZ_KK020676_2 2.11|423304|33|NZ_KK020676|PILER-CR 423304-423336 33 NC_019740 Microcoleus sp. PCC 7113 plasmid pMIC7113.03, complete sequence 30817-30849 11 0.667
NZ_KK020676_2 2.11|423304|33|NZ_KK020676|PILER-CR 423304-423336 33 NC_019740 Microcoleus sp. PCC 7113 plasmid pMIC7113.03, complete sequence 55433-55465 11 0.667

1. spacer 3.11|424846|32|NZ_KK020676|CRT,PILER-CR,CRISPRCasFinder matches to AP014684 (Pseudomonas phage PS-1 DNA, complete sequence) position: , mismatch: 1, identity: 0.969 

gcctcaaacgcaccggtgacgatctcgcgcgc	CRISPR spacer
gcctcaaacgcaccagtgacgatctcgcgcgc	Protospacer
**************.*****************

2. spacer 3.11|424846|32|NZ_KK020676|CRT,PILER-CR,CRISPRCasFinder matches to MF417879 (Uncultured Caudovirales phage clone 3S_11, partial genome) position: , mismatch: 2, identity: 0.938 

gcctcaaacgcaccggtgacgatctcgcgcgc	CRISPR spacer
gcctcaaacgcaccagtgacgatctcgcgtgc	Protospacer
**************.**************.**

3. spacer 3.7|424601|32|NZ_KK020676|CRT,PILER-CR,CRISPRCasFinder matches to MH576962 (Streptomyces phage Satis, complete genome) position: , mismatch: 5, identity: 0.844 

gacagcgcctacgaagtcgccgtgcagaacgg	CRISPR spacer
gactcggcgtacgaagtcgccgtggagaacgg	Protospacer
***   ** *************** *******

4. spacer 3.7|424601|32|NZ_KK020676|CRT,PILER-CR,CRISPRCasFinder matches to MK620894 (Streptomyces phage Kradal, complete genome) position: , mismatch: 5, identity: 0.844 

gacagcgcctacgaagtcgccgtgcagaacgg	CRISPR spacer
gactcggcgtacgaagtcgccgtggagaacgg	Protospacer
***   ** *************** *******

5. spacer 2.1|423123|30|NZ_KK020676|CRT matches to NZ_CP049157 (Caballeronia sp. SBC1 plasmid pSBC1_1, complete sequence) position: , mismatch: 6, identity: 0.8 

---atggtataggccgccaggcgcttgccgtcg	CRISPR spacer
cgaaggata---gccgccatgcgcttgccgtcg	Protospacer
   * *.**   ******* *************

6. spacer 2.1|423123|30|NZ_KK020676|CRT matches to NZ_CP049317 (Caballeronia sp. SBC2 plasmid pSBC2-1, complete sequence) position: , mismatch: 6, identity: 0.8 

---atggtataggccgccaggcgcttgccgtcg	CRISPR spacer
cgaaggata---gccgccatgcgcttgccgtcg	Protospacer
   * *.**   ******* *************

7. spacer 2.3|423243|32|NZ_KK020676|CRT,CRISPRCasFinder matches to NZ_CP049244 (Rhizobium pseudoryzae strain DSM 19479 plasmid unnamed3, complete sequence) position: , mismatch: 6, identity: 0.812 

---ccagccagttgctggcgagcatggtgccgacc	CRISPR spacer
agtccagc---ttgctggagagcatggcgccgacg	Protospacer
   *****   ******* ********.******

8. spacer 2.4|423304|32|NZ_KK020676|CRT,CRISPRCasFinder matches to NZ_CP039697 (Novosphingobium sp. ABRDHK2 plasmid pABRDHK22, complete sequence) position: , mismatch: 6, identity: 0.812 

cttgagc---cgcacgaactgttcgccgcccaggg	CRISPR spacer
---aagcgcgcgcacgaacggttcgccgcccagcg	Protospacer
   .***   ********* ************* *

9. spacer 2.1|423123|30|NZ_KK020676|CRT matches to NZ_CP015065 (Mesorhizobium ciceri biovar biserrulae strain WSM1284 plasmid pMc1284, complete sequence) position: , mismatch: 7, identity: 0.767 

atggtataggccgccaggcgcttgccgtcg	CRISPR spacer
cgcgctttggccgccaggcgattgccgtcg	Protospacer
   *. * ************ *********

10. spacer 2.1|423123|30|NZ_KK020676|CRT matches to NZ_CP015063 (Mesorhizobium ciceri strain CC1192 plasmid pMc1192, complete sequence) position: , mismatch: 7, identity: 0.767 

atggtataggccgccaggcgcttgccgtcg	CRISPR spacer
cgcgctttggccgccaggcgattgccgtcg	Protospacer
   *. * ************ *********

11. spacer 2.1|423123|30|NZ_KK020676|CRT matches to NZ_CP025188 (Roseomonas mucosa strain AD2 plasmid p1-AD2, complete sequence) position: , mismatch: 7, identity: 0.767 

atggtataggccgccaggcgcttgccgtcg	CRISPR spacer
accgtatcggccgccaggagcttgcccatg	Protospacer
*. **** ********** *******  .*

12. spacer 2.3|423243|32|NZ_KK020676|CRT,CRISPRCasFinder matches to NZ_CP019319 (Tateyamaria omphalii strain DOK1-4 plasmid pDOK1-4-7, complete sequence) position: , mismatch: 7, identity: 0.781 

ccagccagttgctggcgagcatggtgccgacc	CRISPR spacer
cgaaatagttgctggcgaacatggtgccgagg	Protospacer
* *. .************.***********

13. spacer 2.3|423243|32|NZ_KK020676|CRT,CRISPRCasFinder matches to NZ_CP018784 (Curtobacterium pusillum strain AA3 plasmid pCPAA3, complete sequence) position: , mismatch: 7, identity: 0.781 

--ccagccagttgctggcgagcatggtgccgacc	CRISPR spacer
gggcggcc--ttgctggcgaggatggggccgacg	Protospacer
   *.***  *********** **** ******

14. spacer 2.3|423243|32|NZ_KK020676|CRT,CRISPRCasFinder matches to CP053333 (Salmonella enterica subsp. diarizonae serovar 47:k:z35 strain 2009K1094 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781 

ccagccagttgctggcgagcatggtgccgacc	CRISPR spacer
gcagccagttgctgaccagcatggccacgaac	Protospacer
 *************.* *******.  *** *

15. spacer 2.10|423243|33|NZ_KK020676|PILER-CR matches to NZ_CP019319 (Tateyamaria omphalii strain DOK1-4 plasmid pDOK1-4-7, complete sequence) position: , mismatch: 7, identity: 0.788 

ccagccagttgctggcgagcatggtgccgaccc	CRISPR spacer
cgaaatagttgctggcgaacatggtgccgaggc	Protospacer
* *. .************.***********  *

16. spacer 3.3|424357|32|NZ_KK020676|CRT,PILER-CR,CRISPRCasFinder matches to NC_015377 (Burkholderia gladioli BSR3 plasmid bgla_2p, complete sequence) position: , mismatch: 7, identity: 0.781 

ccaagacggcgctgaagtcgtcgc-cctgcaag	CRISPR spacer
ccagcacggcgctgaagtcgtcgtagctgctg-	Protospacer
***. ******************.  **** .

17. spacer 3.3|424357|32|NZ_KK020676|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP029777 (Deinococcus actinosclerus strain Deinococcus actinosclerus SJTR plasmid unnamed3, complete sequence) position: , mismatch: 7, identity: 0.781 

ccaagacggcgctgaagtcgtcgccctgcaag	CRISPR spacer
cctggcaggtgctgaagtcgtcgacctgcatg	Protospacer
** .*  **.************* ****** *

18. spacer 3.3|424357|32|NZ_KK020676|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP033429 (Burkholderia gladioli strain Burkholderia gladioli Co14 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.781 

ccaagacggcgctgaagtcgtcgc-cctgcaag	CRISPR spacer
ccagcacggcgctgaagtcgtcgtagctgccg-	Protospacer
***. ******************.  **** .

19. spacer 3.5|424479|32|NZ_KK020676|CRT,PILER-CR,CRISPRCasFinder matches to MF477236 (Nocardia phage NTR1, complete genome) position: , mismatch: 7, identity: 0.781 

ctgatagccggtgtcggtgccggccatctcgc	CRISPR spacer
gtcgaagccggtgtcggtgtcggccgtctcga	Protospacer
 * . **************.*****.*****

20. spacer 3.5|424479|32|NZ_KK020676|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP013855 (Pseudonocardia sp. HH130630-07 plasmid pLS2-1, complete sequence) position: , mismatch: 7, identity: 0.781 

ctgatagccggtgtcggtgccggccatctcgc	CRISPR spacer
ccgggtggcggtgtcggtgccggccagctcga	Protospacer
*.*.  * ****************** ****

21. spacer 3.5|424479|32|NZ_KK020676|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP045120 (Rubrobacter sp. SCSIO 52909 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781 

ctgat--agccggtgtcggtgccggccatctcgc	CRISPR spacer
--gatcaggccggtgtcggcgccggccgtcttgg	Protospacer
  ***  .***********.*******.***.*

22. spacer 3.11|424846|32|NZ_KK020676|CRT,PILER-CR,CRISPRCasFinder matches to NC_016113 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence) position: , mismatch: 7, identity: 0.781 

---gcctcaaacgcaccggtgacgatctcgcgcgc	CRISPR spacer
tggggct---gcgcaccggtgacgaactcgcccgc	Protospacer
   * **   .************** ***** ***

23. spacer 3.11|424846|32|NZ_KK020676|CRT,PILER-CR,CRISPRCasFinder matches to NC_017585 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence) position: , mismatch: 7, identity: 0.781 

---gcctcaaacgcaccggtgacgatctcgcgcgc	CRISPR spacer
tggggct---gcgcaccggtgacgaactcgcccgc	Protospacer
   * **   .************** ***** ***

24. spacer 3.11|424846|32|NZ_KK020676|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP023738 (Methylosinus trichosporium OB3b plasmid pOB3b1, complete sequence) position: , mismatch: 7, identity: 0.781 

gcctcaaacgcaccggtgacgatctcgcgcgc	CRISPR spacer
gactgcgtcgcgccggtggcgatctcgcgcgc	Protospacer
* **  . ***.******.*************

25. spacer 3.11|424846|32|NZ_KK020676|CRT,PILER-CR,CRISPRCasFinder matches to GQ303259 (Mycobacterium phage Colbert, complete genome) position: , mismatch: 7, identity: 0.781 

gcctcaaacgcaccggtgacgatctcgcgcgc	CRISPR spacer
acctcgtcggcaccggcgacgatctcacgcgc	Protospacer
.****.   *******.*********.*****

26. spacer 2.1|423123|30|NZ_KK020676|CRT matches to NZ_CP054032 (Rhizobium sp. JKLM13E plasmid pPR13E01, complete sequence) position: , mismatch: 8, identity: 0.733 

atggtataggccgccaggcgcttgccgtcg	CRISPR spacer
tcgcggaaggccgccaggtgcttgtcgtcg	Protospacer
 .*  . ***********.*****.*****

27. spacer 2.3|423243|32|NZ_KK020676|CRT,CRISPRCasFinder matches to NZ_CP021236 (Pontibacter actiniarum strain DSM 19842 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75 

ccagccagttgctggcgagcatggtgccgacc	CRISPR spacer
cccttgagttgctggtgagcatgatgccggct	Protospacer
**  . *********.*******.*****.*.

28. spacer 2.4|423304|32|NZ_KK020676|CRT,CRISPRCasFinder matches to NC_015170 (Deinococcus proteolyticus MRP plasmid pDEIPR03, complete sequence) position: , mismatch: 8, identity: 0.75 

cttgagccgcacgaactgttcgccgcccaggg	CRISPR spacer
cagcagcagcacgaactcttcgccgccccagc	Protospacer
*   *** ********* ********** .*

29. spacer 2.6|423426|32|NZ_KK020676|CRT,CRISPRCasFinder matches to NZ_CP045339 (Vibrio sp. THAF190c plasmid pTHAF190c_a, complete sequence) position: , mismatch: 8, identity: 0.75 

ttacttcatcaaaaaaactcatgcttattccc	CRISPR spacer
ttaaggtggcaaaaatactcatgcttattacc	Protospacer
***   .. ****** ************* **

30. spacer 2.13|423426|33|NZ_KK020676|PILER-CR matches to NZ_CP045339 (Vibrio sp. THAF190c plasmid pTHAF190c_a, complete sequence) position: , mismatch: 8, identity: 0.758 

ttacttcatcaaaaaaactcatgcttattcccc	CRISPR spacer
ttaaggtggcaaaaatactcatgcttattaccc	Protospacer
***   .. ****** ************* ***

31. spacer 3.1|424235|32|NZ_KK020676|CRT matches to NZ_CP015038 (Burkholderia cenocepacia strain 895 plasmid pBcp895-1, complete sequence) position: , mismatch: 8, identity: 0.75 

gtgggacaacctgtcgccagccgagcgcgcgg	CRISPR spacer
gttccgcgacctgtcgcccgcagagcgcgcgc	Protospacer
**   .*.********** ** *********

32. spacer 3.1|424235|32|NZ_KK020676|CRT matches to NZ_CP015032 (Burkholderia cenocepacia strain 842 plasmid pBcn842-1, complete sequence) position: , mismatch: 8, identity: 0.75 

gtgggacaacctgtcgccagccgagcgcgcgg	CRISPR spacer
gttccgcgacctgtcgcccgcagagcgcgcgc	Protospacer
**   .*.********** ** *********

33. spacer 3.1|424235|32|NZ_KK020676|CRT matches to NZ_CP028965 (Burkholderia sp. IDO3 plasmid p1, complete sequence) position: , mismatch: 8, identity: 0.75 

gtgggacaacctgtcgccagccgagcgcgcgg	CRISPR spacer
gttccgcgacctgtcgcccgcagagcgcgcgc	Protospacer
**   .*.********** ** *********

34. spacer 3.1|424235|32|NZ_KK020676|CRT matches to MK931444 (Klebsiella phage Skenny, complete genome) position: , mismatch: 8, identity: 0.75 

gtgggacaacctgtcgccagccgagcgcgcgg	CRISPR spacer
ttgggaagacctgtcgccagccgataaggtgg	Protospacer
 ***** .****************  . *.**

35. spacer 3.3|424357|32|NZ_KK020676|CRT,PILER-CR,CRISPRCasFinder matches to NZ_LT703510 (Mycobacterium chimaera strain Mycobacterium chimaera MC045 isolate Mycobacterium chimaera plasmid 6) position: , mismatch: 8, identity: 0.75 

ccaagacggcgctgaagtcgtcgccctgcaag	CRISPR spacer
cggtgacggcgcagaagtcgtcgcgctgcgca	Protospacer
* . ******** *********** ****. .

36. spacer 3.3|424357|32|NZ_KK020676|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP015275 (Mycobacterium chimaera strain ZUERICH-1 plasmid unnamed 3, complete sequence) position: , mismatch: 8, identity: 0.75 

ccaagacggcgctgaagtcgtcgccctgcaag	CRISPR spacer
cggtgacggcgcagaagtcgtcgcgctgcgca	Protospacer
* . ******** *********** ****. .

37. spacer 3.3|424357|32|NZ_KK020676|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP019222 (Mycobacterium chimaera strain CDC 2015-22-71 plasmid pDHQP20152271_3, complete sequence) position: , mismatch: 8, identity: 0.75 

ccaagacggcgctgaagtcgtcgccctgcaag	CRISPR spacer
cggtgacggcgcagaagtcgtcgcgctgcgca	Protospacer
* . ******** *********** ****. .

38. spacer 3.3|424357|32|NZ_KK020676|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP045966 (Mycobacterium chimaera strain AUSMDU00007395 plasmid pAUSMDU00007395_03, complete sequence) position: , mismatch: 8, identity: 0.75 

ccaagacggcgctgaagtcgtcgccctgcaag	CRISPR spacer
cggtgacggcgcagaagtcgtcgcgctgcgca	Protospacer
* . ******** *********** ****. .

39. spacer 3.3|424357|32|NZ_KK020676|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP016082 (Streptomyces sp. SAT1 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75 

ccaagacggcgctgaagtcgtcgccctgcaag	CRISPR spacer
tgccgccggcgctgaagtcgccgcccagcacg	Protospacer
.   * **************.***** *** *

40. spacer 3.3|424357|32|NZ_KK020676|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP013515 (Rhizobium sp. N1314 plasmid pRspN1314d, complete sequence) position: , mismatch: 8, identity: 0.75 

ccaagacggcgctgaagtcgtcgccctgcaag	CRISPR spacer
cgaagacggcgatgaagccgtcgccccggcgc	Protospacer
* ********* *****.********.*  .

41. spacer 3.3|424357|32|NZ_KK020676|CRT,PILER-CR,CRISPRCasFinder matches to NC_011984 (Agrobacterium vitis S4 plasmid pAtS4c, complete sequence) position: , mismatch: 8, identity: 0.75 

ccaagacggcgctgaagtcgtcgccctgcaag	CRISPR spacer
ggaaatcggcgatgaactcgtcgccctgcaca	Protospacer
  **. ***** **** ************* .

42. spacer 3.3|424357|32|NZ_KK020676|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP013605 (Rhizobium sp. N731 plasmid pRspN731d, complete sequence) position: , mismatch: 8, identity: 0.75 

ccaagacggcgctgaagtcgtcgccctgcaag	CRISPR spacer
cgaagacggcgatgaagccgtcgccccggcgc	Protospacer
* ********* *****.********.*  .

43. spacer 3.5|424479|32|NZ_KK020676|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP052758 (Cellulosimicrobium sp. BI34T plasmid pCPRO01, complete sequence) position: , mismatch: 8, identity: 0.75 

ctgatagccggtgtcggtgccggccatctcgc	CRISPR spacer
gtcggtgtcggtgtcggtgtcggccagctcgc	Protospacer
 * .  *.***********.****** *****

44. spacer 3.5|424479|32|NZ_KK020676|CRT,PILER-CR,CRISPRCasFinder matches to NC_016907 (Gordonia polyisoprenivorans VH2 plasmid p174, complete sequence) position: , mismatch: 8, identity: 0.75 

ctgatagccggtgtcggtgccggccatctcgc	CRISPR spacer
cagatagccggtgtaggtgccgtccgggccac	Protospacer
* ************ ******* **.  .*.*

45. spacer 3.7|424601|32|NZ_KK020676|CRT,PILER-CR,CRISPRCasFinder matches to NC_016113 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence) position: , mismatch: 8, identity: 0.75 

gacagcgcctacgaagtcgccgtgcagaacgg	CRISPR spacer
aacgaggtgtacgacgtcgccgtgcaggacgg	Protospacer
.**.. *. ***** ************.****

46. spacer 3.7|424601|32|NZ_KK020676|CRT,PILER-CR,CRISPRCasFinder matches to NC_017585 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence) position: , mismatch: 8, identity: 0.75 

gacagcgcctacgaagtcgccgtgcagaacgg	CRISPR spacer
aacgaggtgtacgacgtcgccgtgcaggacgg	Protospacer
.**.. *. ***** ************.****

47. spacer 3.11|424846|32|NZ_KK020676|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP017303 (Rhodococcus sp. YL-1 plasmid pYLL1 sequence) position: , mismatch: 8, identity: 0.75 

gcctcaaacgcaccggtgacgatctcgcgcgc	CRISPR spacer
acttcaaacgcaccgttgatgatctcttcggc	Protospacer
.*.************ ***.****** .  **

48. spacer 2.1|423123|30|NZ_KK020676|CRT matches to NZ_CP016291 (Rhizobium leguminosarum strain Vaf10 plasmid unnamed6, complete sequence) position: , mismatch: 9, identity: 0.7 

atggtataggccgccaggcgcttgccgtcg	CRISPR spacer
gaacccgaggtcgtcaggcgcttgccgtcg	Protospacer
. . .  ***.**.****************

49. spacer 2.1|423123|30|NZ_KK020676|CRT matches to NZ_CP029356 (Azospirillum sp. CFH 70021 plasmid unnamed1) position: , mismatch: 9, identity: 0.7 

atggtataggccgccaggcgcttgccgtcg	CRISPR spacer
agatcggcagccggcaggcgcttgccgtcg	Protospacer
* . ..  .**** ****************

50. spacer 2.1|423123|30|NZ_KK020676|CRT matches to NZ_CP022568 (Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK04, complete sequence) position: , mismatch: 9, identity: 0.7 

atggtataggccgccaggcgcttgccgtcg	CRISPR spacer
gaacccgaggtcgtcaggcgcttgccgtcg	Protospacer
. . .  ***.**.****************

51. spacer 2.2|423182|32|NZ_KK020676|CRT,CRISPRCasFinder matches to JX681814 (Burkholderia phage phiX216, complete genome) position: , mismatch: 9, identity: 0.719 

atccggcggcgctgcgtgaatcgaacctcggt	CRISPR spacer
tggcgacggggctgcgtgaatcgaacgtgcga	Protospacer
   **.*** **************** *  *

52. spacer 2.2|423182|32|NZ_KK020676|CRT,CRISPRCasFinder matches to DQ087285 (Burkholderia pseudomallei phage phi52237, complete genome) position: , mismatch: 9, identity: 0.719 

atccggcggcgctgcgtgaatcgaacctcggt	CRISPR spacer
tggcgacggggctgcgtgaatcgaacgtgcga	Protospacer
   **.*** **************** *  *

53. spacer 2.2|423182|32|NZ_KK020676|CRT,CRISPRCasFinder matches to NC_007145 (Burkholderia prophage phi52237, complete genome) position: , mismatch: 9, identity: 0.719 

atccggcggcgctgcgtgaatcgaacctcggt	CRISPR spacer
tggcgacggggctgcgtgaatcgaacgtgcga	Protospacer
   **.*** **************** *  *

54. spacer 2.2|423182|32|NZ_KK020676|CRT,CRISPRCasFinder matches to CP008753 (Burkholderia phage BEK, complete genome) position: , mismatch: 9, identity: 0.719 

atccggcggcgctgcgtgaatcgaacctcggt	CRISPR spacer
tggcgacggggctgcgtgaatcgaacgtgcga	Protospacer
   **.*** **************** *  *

55. spacer 2.3|423243|32|NZ_KK020676|CRT,CRISPRCasFinder matches to NZ_CP014127 (Pantoea vagans strain FDAARGOS_160 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719 

ccagccagttgctggcgagcatggtgccgacc	CRISPR spacer
tcgcggcggtgctgccgagcgtggtgccgacc	Protospacer
.*.    * ***** *****.***********

56. spacer 2.3|423243|32|NZ_KK020676|CRT,CRISPRCasFinder matches to NC_014258 (Pantoea vagans C9-1 plasmid pPag3, complete sequence) position: , mismatch: 9, identity: 0.719 

ccagccagttgctggcgagcatggtgccgacc	CRISPR spacer
tcgcggcggtgctgccgagcgtggtgccgacc	Protospacer
.*.    * ***** *****.***********

57. spacer 2.3|423243|32|NZ_KK020676|CRT,CRISPRCasFinder matches to NZ_CP014308 (Burkholderia sp. PAMC 26561 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719 

ccagccagttgctggcgagcatggtgccgacc	CRISPR spacer
tcgaccagttgctgccgagcacggtgcaaggc	Protospacer
.*..********** ******.***** .. *

58. spacer 2.3|423243|32|NZ_KK020676|CRT,CRISPRCasFinder matches to NZ_CP014309 (Burkholderia sp. PAMC 26561 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719 

ccagccagttgctggcgagcatggtgccgacc	CRISPR spacer
tcgaccagttgctgccgagcacggtgcaaggc	Protospacer
.*..********** ******.***** .. *

59. spacer 2.4|423304|32|NZ_KK020676|CRT,CRISPRCasFinder matches to NZ_CP013381 (Burkholderia sp. Bp5365 strain MSMB43 plasmid pMSMB43, complete sequence) position: , mismatch: 9, identity: 0.719 

cttgagccgcacgaactgttcgccgcccaggg	CRISPR spacer
gacgagccgcacgaacggatcgccgcccgcct	Protospacer
  .************* * *********.

60. spacer 2.4|423304|32|NZ_KK020676|CRT,CRISPRCasFinder matches to NZ_CP009547 (Burkholderia sp. 2002721687 plasmid pBTU, complete sequence) position: , mismatch: 9, identity: 0.719 

cttgagccgcacgaactgttcgccgcccaggg	CRISPR spacer
gacgagccgcacgaacggatcgccgcccgcct	Protospacer
  .************* * *********.

61. spacer 2.4|423304|32|NZ_KK020676|CRT,CRISPRCasFinder matches to NZ_CP010421 (Azotobacter chroococcum NCIMB 8003 plasmid pAcX50f, complete sequence) position: , mismatch: 9, identity: 0.719 

cttgagccgcacgaactgttcgccgcccaggg	CRISPR spacer
tctccgctgcacgaactgttcgccgaccaact	Protospacer
..*  **.***************** ***.

62. spacer 2.4|423304|32|NZ_KK020676|CRT,CRISPRCasFinder matches to NZ_CP054621 (Azospirillum oryzae strain KACC 14407 plasmid unnamed6, complete sequence) position: , mismatch: 9, identity: 0.719 

cttgagccgcacgaactgttcgccgcccaggg	CRISPR spacer
cgcgagccgctcgaacggttcgccgccttcca	Protospacer
* .******* ***** **********.   .

63. spacer 2.4|423304|32|NZ_KK020676|CRT,CRISPRCasFinder matches to NZ_CP017076 (Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence) position: , mismatch: 9, identity: 0.719 

cttgagccgcacgaactgttcgccgcccaggg	CRISPR spacer
agaaagccgcacgaactgaccgccgccgtgga	Protospacer
   .************** .*******  **.

64. spacer 2.4|423304|32|NZ_KK020676|CRT,CRISPRCasFinder matches to NZ_CP028976 (Cronobacter sakazakii strain GZcsf-1 plasmid pGW2, complete sequence) position: , mismatch: 9, identity: 0.719 

cttgagccgcacgaactgttcgccgcccaggg	CRISPR spacer
gggaagccgcacgaacggttcgccaccactgg	Protospacer
   .************ *******.**   **

65. spacer 2.4|423304|32|NZ_KK020676|CRT,CRISPRCasFinder matches to NZ_CP011048 (Cronobacter sakazakii strain ATCC 29544 plasmid CSK29544_1p, complete sequence) position: , mismatch: 9, identity: 0.719 

cttgagccgcacgaactgttcgccgcccaggg	CRISPR spacer
gggaagccgcacgaacggttcgccaccactgg	Protospacer
   .************ *******.**   **

66. spacer 2.4|423304|32|NZ_KK020676|CRT,CRISPRCasFinder matches to MT270409 (Phaeobacter phage MD18, complete genome) position: , mismatch: 9, identity: 0.719 

cttgagccgcacgaactgttcgccgcccaggg	CRISPR spacer
tgcggggcgcacgaacagctcgccgcccagct	Protospacer
. .*.* ********* *.***********

67. spacer 2.4|423304|32|NZ_KK020676|CRT,CRISPRCasFinder matches to KR053199 (Gordonia phage GMA4, complete genome) position: , mismatch: 9, identity: 0.719 

cttgagccgcacgaactgttcgccgcccaggg	CRISPR spacer
caccagacgcacgaactgttcgtcgcctacct	Protospacer
* . ** ***************.****.*

68. spacer 2.11|423304|33|NZ_KK020676|PILER-CR matches to NC_015170 (Deinococcus proteolyticus MRP plasmid pDEIPR03, complete sequence) position: , mismatch: 9, identity: 0.727 

cttgagccgcacgaactgttcgccgcccagggc	CRISPR spacer
cagcagcagcacgaactcttcgccgccccagcg	Protospacer
*   *** ********* ********** .*

69. spacer 2.11|423304|33|NZ_KK020676|PILER-CR matches to NZ_CP054621 (Azospirillum oryzae strain KACC 14407 plasmid unnamed6, complete sequence) position: , mismatch: 9, identity: 0.727 

cttgagccgcacgaactgttcgccgcccagggc	CRISPR spacer
cgcgagccgctcgaacggttcgccgccttccac	Protospacer
* .******* ***** **********.   .*

70. spacer 3.1|424235|32|NZ_KK020676|CRT matches to KY575286 (UNVERIFIED: Klebsiella phage SH-Kp 160016, complete genome) position: , mismatch: 9, identity: 0.719 

gtgggacaacctgtcgccagccgagcgcgcgg	CRISPR spacer
ttgggaagacctgtcgccagccgataagctgg	Protospacer
 ***** .****************  .  .**

71. spacer 3.1|424235|32|NZ_KK020676|CRT matches to MH633486 (Klebsiella phage NJS3, complete genome) position: , mismatch: 9, identity: 0.719 

gtgggacaacctgtcgccagccgagcgcgcgg	CRISPR spacer
ttgggaagacctgtcgccagccgataagctgg	Protospacer
 ***** .****************  .  .**

72. spacer 3.1|424235|32|NZ_KK020676|CRT matches to NC_049845 (Klebsiella phage PhiKpNIH-2, complete genome) position: , mismatch: 9, identity: 0.719 

gtgggacaacctgtcgccagccgagcgcgcgg	CRISPR spacer
ttgggaagacctgtcgccagccgataagctgg	Protospacer
 ***** .****************  .  .**

73. spacer 3.1|424235|32|NZ_KK020676|CRT matches to MK618657 (Klebsiella phage Sanco, complete genome) position: , mismatch: 9, identity: 0.719 

gtgggacaacctgtcgccagccgagcgcgcgg	CRISPR spacer
ttgggaagacctgtcgccagccgataagctgg	Protospacer
 ***** .****************  .  .**

74. spacer 3.1|424235|32|NZ_KK020676|CRT matches to NC_049842 (Klebsiella phage vB_KpnS_15-38_KLPPOU149, complete genome) position: , mismatch: 9, identity: 0.719 

gtgggacaacctgtcgccagccgagcgcgcgg	CRISPR spacer
ttgggaagacctgtcgccagccgataagctgg	Protospacer
 ***** .****************  .  .**

75. spacer 3.1|424235|32|NZ_KK020676|CRT matches to MF415412 (Klebsiella phage KPN N141, complete genome) position: , mismatch: 9, identity: 0.719 

gtgggacaacctgtcgccagccgagcgcgcgg	CRISPR spacer
ttgggaagacctgtcgccagccgataagctgg	Protospacer
 ***** .****************  .  .**

76. spacer 3.1|424235|32|NZ_KK020676|CRT matches to MF612072 (Klebsiella phage MezzoGao, complete genome) position: , mismatch: 9, identity: 0.719 

gtgggacaacctgtcgccagccgagcgcgcgg	CRISPR spacer
ttgggaagacctgtcgccagccgataagctgg	Protospacer
 ***** .****************  .  .**

77. spacer 3.1|424235|32|NZ_KK020676|CRT matches to MT894005 (Klebsiella phage MMBB, complete genome) position: , mismatch: 9, identity: 0.719 

gtgggacaacctgtcgccagccgagcgcgcgg	CRISPR spacer
ttgggaagacctgtcgccagccgataagctgg	Protospacer
 ***** .****************  .  .**

78. spacer 3.1|424235|32|NZ_KK020676|CRT matches to MK931445 (Klebsiella phage Shelby, complete genome) position: , mismatch: 9, identity: 0.719 

gtgggacaacctgtcgccagccgagcgcgcgg	CRISPR spacer
ttgggaagacctgtcgccagccgataagctgg	Protospacer
 ***** .****************  .  .**

79. spacer 3.1|424235|32|NZ_KK020676|CRT matches to JF501022 (Klebsiella phage KP36, complete genome) position: , mismatch: 9, identity: 0.719 

gtgggacaacctgtcgccagccgagcgcgcgg	CRISPR spacer
ttgggaagacctgtcgccagccgataagctgg	Protospacer
 ***** .****************  .  .**

80. spacer 3.1|424235|32|NZ_KK020676|CRT matches to KP658157 (Klebsiella phage 1513, complete genome) position: , mismatch: 9, identity: 0.719 

gtgggacaacctgtcgccagccgagcgcgcgg	CRISPR spacer
ttgggaagacctgtcgccagccgataagctgg	Protospacer
 ***** .****************  .  .**

81. spacer 3.1|424235|32|NZ_KK020676|CRT matches to NC_049848 (Klebsiella phage KP1801, complete genome) position: , mismatch: 9, identity: 0.719 

gtgggacaacctgtcgccagccgagcgcgcgg	CRISPR spacer
ttgggaagacctgtcgccagccgataagctgg	Protospacer
 ***** .****************  .  .**

82. spacer 3.1|424235|32|NZ_KK020676|CRT matches to MH633484 (Klebsiella phage TAH8, complete genome) position: , mismatch: 9, identity: 0.719 

gtgggacaacctgtcgccagccgagcgcgcgg	CRISPR spacer
ttgggaagacctgtcgccagccgataagctgg	Protospacer
 ***** .****************  .  .**

83. spacer 3.1|424235|32|NZ_KK020676|CRT matches to MK931442 (Klebsiella phage Sin4, complete genome) position: , mismatch: 9, identity: 0.719 

gtgggacaacctgtcgccagccgagcgcgcgg	CRISPR spacer
ttgggaagacctgtcgccagccgataagctgg	Protospacer
 ***** .****************  .  .**

84. spacer 3.1|424235|32|NZ_KK020676|CRT matches to NC_048043 (Klebsiella phage NJS2, complete genome) position: , mismatch: 9, identity: 0.719 

gtgggacaacctgtcgccagccgagcgcgcgg	CRISPR spacer
ttgggaagacctgtcgccagccgataagctgg	Protospacer
 ***** .****************  .  .**

85. spacer 3.1|424235|32|NZ_KK020676|CRT matches to MK931443 (Klebsiella phage Sweeny, complete genome) position: , mismatch: 9, identity: 0.719 

gtgggacaacctgtcgccagccgagcgcgcgg	CRISPR spacer
ttgggaagacctgtcgccagccgataagctgg	Protospacer
 ***** .****************  .  .**

86. spacer 3.1|424235|32|NZ_KK020676|CRT matches to NC_049838 (Klebsiella phage KL, complete genome) position: , mismatch: 9, identity: 0.719 

gtgggacaacctgtcgccagccgagcgcgcgg	CRISPR spacer
ttgggaagacctgtcgccagccgataagctgg	Protospacer
 ***** .****************  .  .**

87. spacer 3.1|424235|32|NZ_KK020676|CRT matches to NC_049838 (Klebsiella phage KL, complete genome) position: , mismatch: 9, identity: 0.719 

gtgggacaacctgtcgccagccgagcgcgcgg	CRISPR spacer
ttgggaagacctgtcgccagccgataagctgg	Protospacer
 ***** .****************  .  .**

88. spacer 3.1|424235|32|NZ_KK020676|CRT matches to MH844531 (Klebsiella phage GH-K3, complete genome) position: , mismatch: 9, identity: 0.719 

gtgggacaacctgtcgccagccgagcgcgcgg	CRISPR spacer
ttgggaagacctgtcgccagccgataagctgg	Protospacer
 ***** .****************  .  .**

89. spacer 3.1|424235|32|NZ_KK020676|CRT matches to NC_048044 (Klebsiella phage NJR15, complete genome) position: , mismatch: 9, identity: 0.719 

gtgggacaacctgtcgccagccgagcgcgcgg	CRISPR spacer
ttgggaagacctgtcgccagccgataagctgg	Protospacer
 ***** .****************  .  .**

90. spacer 3.1|424235|32|NZ_KK020676|CRT matches to MG894052 (Klebsiella phage JY917, complete genome) position: , mismatch: 9, identity: 0.719 

gtgggacaacctgtcgccagccgagcgcgcgg	CRISPR spacer
ttgggaagacctgtcgccagccgataagctgg	Protospacer
 ***** .****************  .  .**

91. spacer 3.1|424235|32|NZ_KK020676|CRT matches to NC_048126 (Klebsiella phage TSK1, complete genome) position: , mismatch: 9, identity: 0.719 

gtgggacaacctgtcgccagccgagcgcgcgg	CRISPR spacer
ttgggaagacctgtcgccagccgataagctgg	Protospacer
 ***** .****************  .  .**

92. spacer 3.1|424235|32|NZ_KK020676|CRT matches to NC_028774 (Klebsiella phage Sushi, complete genome) position: , mismatch: 9, identity: 0.719 

gtgggacaacctgtcgccagccgagcgcgcgg	CRISPR spacer
ttgggaagacctgtcgccagccgataagctgg	Protospacer
 ***** .****************  .  .**

93. spacer 3.1|424235|32|NZ_KK020676|CRT matches to NC_049844 (Klebsiella phage 13, complete genome) position: , mismatch: 9, identity: 0.719 

gtgggacaacctgtcgccagccgagcgcgcgg	CRISPR spacer
ttgggaagacctgtcgccagccgataagctgg	Protospacer
 ***** .****************  .  .**

94. spacer 3.3|424357|32|NZ_KK020676|CRT,PILER-CR,CRISPRCasFinder matches to EF579802 (Microbacterium phage Min1, complete genome) position: , mismatch: 9, identity: 0.719 

ccaagacggcgctgaagtcgtcgccctgcaag	CRISPR spacer
cgccaacggcgctgaggtcgttgccctgcgca	Protospacer
*   .**********.*****.*******. .

95. spacer 3.5|424479|32|NZ_KK020676|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP012183 (Pseudonocardia sp. EC080610-09 plasmid pBCI2-2, complete sequence) position: , mismatch: 9, identity: 0.719 

ctgatagccggtgtcggtgccggccatctcgc	CRISPR spacer
gttcccgtcggtgtcggtgcaggccatcgcgg	Protospacer
 *  . *.************ ******* **

96. spacer 3.11|424846|32|NZ_KK020676|CRT,PILER-CR,CRISPRCasFinder matches to LR606148 (Rhizobium sp. Q54 genome assembly, plasmid: 5) position: , mismatch: 9, identity: 0.719 

gcctcaaacgcaccggtgacgatctcgcgcgc	CRISPR spacer
agccttctcgcaccgatgacgatcacgcgcgc	Protospacer
. *..   *******.******** *******

97. spacer 3.11|424846|32|NZ_KK020676|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP018080 (Sulfitobacter sp. AM1-D1 plasmid unnamed4, complete sequence) position: , mismatch: 9, identity: 0.719 

gcctcaaacgcaccggtgacgatctcgcgcgc	CRISPR spacer
gtcgatggcgcaccgtagacgatctcgcgcgt	Protospacer
*.*   ..*******  **************.

98. spacer 2.2|423182|32|NZ_KK020676|CRT,CRISPRCasFinder matches to NZ_LT703507 (Mycobacterium chimaera strain Mycobacterium chimaera MC045 isolate Mycobacterium chimaera plasmid 3) position: , mismatch: 10, identity: 0.688 

atccggcggcgctgcgtgaatcgaacctcggt	CRISPR spacer
cctcggcgacactgcgtgaatcgaacacctcc	Protospacer
 ..*****.*.*************** .*  .

99. spacer 2.2|423182|32|NZ_KK020676|CRT,CRISPRCasFinder matches to NZ_CP015280 (Mycobacterium chimaera strain DSM 44623 plasmid unnamed 2, complete sequence) position: , mismatch: 10, identity: 0.688 

atccggcggcgctgcgtgaatcgaacctcggt	CRISPR spacer
cctcggcgacactgcgtgaatcgaacacctcc	Protospacer
 ..*****.*.*************** .*  .

100. spacer 2.2|423182|32|NZ_KK020676|CRT,CRISPRCasFinder matches to NZ_CP015273 (Mycobacterium chimaera strain ZUERICH-1 plasmid unnamed 1, complete sequence) position: , mismatch: 10, identity: 0.688 

atccggcggcgctgcgtgaatcgaacctcggt	CRISPR spacer
cctcggcgacactgcgtgaatcgaacacctcc	Protospacer
 ..*****.*.*************** .*  .

101. spacer 2.2|423182|32|NZ_KK020676|CRT,CRISPRCasFinder matches to NZ_CP023153 (Mycobacterium chimaera strain FLAC0070 plasmid pFLAC0070_2, complete sequence) position: , mismatch: 10, identity: 0.688 

atccggcggcgctgcgtgaatcgaacctcggt	CRISPR spacer
cctcggcgacactgcgtgaatcgaacacctcc	Protospacer
 ..*****.*.*************** .*  .

102. spacer 2.2|423182|32|NZ_KK020676|CRT,CRISPRCasFinder matches to NC_020275 (Mycobacterium intracellulare subsp. yongonense 05-1390 plasmid pMyong1, complete sequence) position: , mismatch: 10, identity: 0.688 

atccggcggcgctgcgtgaatcgaacctcggt	CRISPR spacer
cctcggcgacactgcgtgaatcgaacacctcc	Protospacer
 ..*****.*.*************** .*  .

103. spacer 2.2|423182|32|NZ_KK020676|CRT,CRISPRCasFinder matches to NZ_CP029333 (Mycobacterium avium subsp. hominissuis strain MAC109 plasmid pMAC109a, complete sequence) position: , mismatch: 10, identity: 0.688 

atccggcggcgctgcgtgaatcgaacctcggt	CRISPR spacer
cctcggcgacactgcgtgaatcgaacacctcc	Protospacer
 ..*****.*.*************** .*  .

104. spacer 2.2|423182|32|NZ_KK020676|CRT,CRISPRCasFinder matches to NZ_CP019224 (Mycobacterium chimaera strain CDC 2015-22-71 plasmid pDHQP20152271_1, complete sequence) position: , mismatch: 10, identity: 0.688 

atccggcggcgctgcgtgaatcgaacctcggt	CRISPR spacer
cctcggcgacactgcgtgaatcgaacacctcc	Protospacer
 ..*****.*.*************** .*  .

105. spacer 2.2|423182|32|NZ_KK020676|CRT,CRISPRCasFinder matches to NZ_CP045964 (Mycobacterium chimaera strain AUSMDU00007395 plasmid pAUSMDU00007395_01, complete sequence) position: , mismatch: 10, identity: 0.688 

atccggcggcgctgcgtgaatcgaacctcggt	CRISPR spacer
cctcggcgacactgcgtgaatcgaacacctcc	Protospacer
 ..*****.*.*************** .*  .

106. spacer 2.2|423182|32|NZ_KK020676|CRT,CRISPRCasFinder matches to NC_022654 (Mycobacterium kansasii ATCC 12478 plasmid pMK12478, complete sequence) position: , mismatch: 10, identity: 0.688 

atccggcggcgctgcgtgaatcgaacctcggt	CRISPR spacer
cctcggcgacactgcgtgaatcgaacacctcc	Protospacer
 ..*****.*.*************** .*  .

107. spacer 2.4|423304|32|NZ_KK020676|CRT,CRISPRCasFinder matches to NC_019740 (Microcoleus sp. PCC 7113 plasmid pMIC7113.03, complete sequence) position: , mismatch: 10, identity: 0.688 

cttgagccgcacgaactgttcgccgcccaggg	CRISPR spacer
acaccaccgcacaaactgttcgccgtccagca	Protospacer
 .   .******.************.**** .

108. spacer 2.4|423304|32|NZ_KK020676|CRT,CRISPRCasFinder matches to NC_019740 (Microcoleus sp. PCC 7113 plasmid pMIC7113.03, complete sequence) position: , mismatch: 10, identity: 0.688 

cttgagccgcacgaactgttcgccgcccaggg	CRISPR spacer
acaccaccgcacaaactgttcgccgtccagca	Protospacer
 .   .******.************.**** .

109. spacer 2.11|423304|33|NZ_KK020676|PILER-CR matches to NZ_CP013381 (Burkholderia sp. Bp5365 strain MSMB43 plasmid pMSMB43, complete sequence) position: , mismatch: 10, identity: 0.697 

cttgagccgcacgaactgttcgccgcccagggc	CRISPR spacer
gacgagccgcacgaacggatcgccgcccgcctg	Protospacer
  .************* * *********.

110. spacer 2.11|423304|33|NZ_KK020676|PILER-CR matches to NZ_CP009547 (Burkholderia sp. 2002721687 plasmid pBTU, complete sequence) position: , mismatch: 10, identity: 0.697 

cttgagccgcacgaactgttcgccgcccagggc	CRISPR spacer
gacgagccgcacgaacggatcgccgcccgcctg	Protospacer
  .************* * *********.

111. spacer 2.11|423304|33|NZ_KK020676|PILER-CR matches to NZ_CP010421 (Azotobacter chroococcum NCIMB 8003 plasmid pAcX50f, complete sequence) position: , mismatch: 10, identity: 0.697 

cttgagccgcacgaactgttcgccgcccagggc	CRISPR spacer
tctccgctgcacgaactgttcgccgaccaactg	Protospacer
..*  **.***************** ***.

112. spacer 3.1|424235|32|NZ_KK020676|CRT matches to NZ_CP025505 (Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvC, complete sequence) position: , mismatch: 10, identity: 0.688 

gtgggacaacctgtcgccagccgagcgcgcgg	CRISPR spacer
gccggagaaccggtcgccagccgagccttttc	Protospacer
*. *** **** ************** . .

113. spacer 3.3|424357|32|NZ_KK020676|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP011297 (Rhodococcus erythropolis strain BG43 plasmid pRLLBG43, complete sequence) position: , mismatch: 10, identity: 0.688 

ccaagacggcgctgaagtcgtcgccctgcaag	CRISPR spacer
ggagcacggcgcggcagtcgtcgccctgacca	Protospacer
  *. ******* * *************   .

114. spacer 3.5|424479|32|NZ_KK020676|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP050083 (Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b3, complete sequence) position: , mismatch: 10, identity: 0.688 

ctgatagccggtgtcggtgccggccatctcgc	CRISPR spacer
catcctgccggcgtcggtgccggcaatcttcg	Protospacer
*   . *****.************ ****.

115. spacer 3.5|424479|32|NZ_KK020676|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP049733 (Rhizobium leguminosarum strain A1 plasmid pRL10, complete sequence) position: , mismatch: 10, identity: 0.688 

ctgatagccggtgtcggtgccggccatctcgc	CRISPR spacer
catcctgccggcgtcggtgccggcaatcttcg	Protospacer
*   . *****.************ ****.

116. spacer 3.5|424479|32|NZ_KK020676|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP053207 (Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1C, complete sequence) position: , mismatch: 10, identity: 0.688 

ctgatagccggtgtcggtgccggccatctcgc	CRISPR spacer
catcctgccggcgtcggtgccggcaatcttcg	Protospacer
*   . *****.************ ****.

117. spacer 2.4|423304|32|NZ_KK020676|CRT,CRISPRCasFinder matches to NZ_CP031079 (Paracoccus yeei strain CCUG 32053 plasmid pYEE1, complete sequence) position: , mismatch: 11, identity: 0.656 

cttgagccgcacgaactgttcgccgcccaggg	CRISPR spacer
tgcatcgtgcacgaacagttcaccgcccagga	Protospacer
. ..   .******** ****.*********.

118. spacer 2.4|423304|32|NZ_KK020676|CRT,CRISPRCasFinder matches to KU160673 (Arthrobacter phage Wilde, complete genome) position: , mismatch: 11, identity: 0.656 

cttgagccgcacgaactgttcgccgcccaggg	CRISPR spacer
gaccagctgcacgagctgttcgccgcctctct	Protospacer
  . ***.******.************.

119. spacer 2.4|423304|32|NZ_KK020676|CRT,CRISPRCasFinder matches to KU160669 (Arthrobacter phage Tank, complete genome) position: , mismatch: 11, identity: 0.656 

cttgagccgcacgaactgttcgccgcccaggg	CRISPR spacer
gaccagctgcacgagctgttcgccgcctctct	Protospacer
  . ***.******.************.

120. spacer 2.11|423304|33|NZ_KK020676|PILER-CR matches to NC_019740 (Microcoleus sp. PCC 7113 plasmid pMIC7113.03, complete sequence) position: , mismatch: 11, identity: 0.667 

cttgagccgcacgaactgttcgccgcccagggc	CRISPR spacer
acaccaccgcacaaactgttcgccgtccagcat	Protospacer
 .   .******.************.**** ..

121. spacer 2.11|423304|33|NZ_KK020676|PILER-CR matches to NC_019740 (Microcoleus sp. PCC 7113 plasmid pMIC7113.03, complete sequence) position: , mismatch: 11, identity: 0.667 

cttgagccgcacgaactgttcgccgcccagggc	CRISPR spacer
acaccaccgcacaaactgttcgccgtccagcat	Protospacer
 .   .******.************.**** ..

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 276498 : 325300 41 Wolbachia_phage(14.29%) tRNA,integrase,protease attL 316469:316485|attR 327074:327090
DBSCAN-SWA_2 958518 : 973350 6 Bacillus_phage(33.33%) NA NA
DBSCAN-SWA_3 1396676 : 1458820 51 Pseudomonas_phage(33.33%) transposase,integrase,protease attL 1401844:1401890|attR 1413394:1413440
DBSCAN-SWA_4 1939383 : 1989276 80 Pseudomonas_phage(57.14%) terminase,capsid NA
DBSCAN-SWA_5 2333153 : 2387416 71 uncultured_Caudovirales_phage(75.0%) holin,plate,integrase,tail,terminase,portal,capsid,head attL 2330731:2330749|attR 2370701:2370719

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Click the colored protein region to show detailed information
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
NZ_KK020676.1|WP_031323581.1|2346626_2347061_-|hypothetical-protein 2346626_2347061_- 144 aa aa AcrIC6 NA NZ_KK020676.1_2346423_2346627_- 2333153-2387416 NA
NZ_KK020676.1|WP_003294373.1|2347110_2347395_-|hypothetical-protein 2347110_2347395_- 94 aa aa AcrIC7 NA NZ_KK020676.1_2346423_2346627_- 2333153-2387416 NA
2. NZ_KK020678
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 283034 : 295601 13 Bacillus_phage(33.33%) tRNA,integrase,transposase attL 282041:282055|attR 294125:294139

Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
3. NZ_KK020675
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 783885 : 789964 9 Lake_Baikal_phage(33.33%) NA NA

Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
4. NZ_KK020677
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 134051 : 143274 10 Bacillus_phage(42.86%) NA NA
DBSCAN-SWA_2 261526 : 269345 10 Thermobifida_phage(16.67%) NA NA

Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage