CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_JNGJ01000007	Listeria monocytogenes strain J2692 J2692-1.seq7, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_JNGJ01000021	Listeria monocytogenes strain J2692 J2692-1.seq21, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_JNGJ01000009	Listeria monocytogenes strain J2692 J2692-1.seq9, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_JNGJ01000004	Listeria monocytogenes strain J2692 J2692-1.seq4, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_JNGJ01000001	Listeria monocytogenes strain J2692 J2692-1.seq1, whole genome shotgun sequence	0 crisprs	DinG	0	0	1	0
NZ_JNGJ01000016	Listeria monocytogenes strain J2692 J2692-1.seq16, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_JNGJ01000017	Listeria monocytogenes strain J2692 J2692-1.seq17, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_JNGJ01000027	Listeria monocytogenes strain J2692 J2692-1.seq28, whole genome shotgun sequence	0 crisprs	NA	0	0	0	1
NZ_JNGJ01000005	Listeria monocytogenes strain J2692 J2692-1.seq5, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_JNGJ01000022	Listeria monocytogenes strain J2692 J2692-1.seq22, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_JNGJ01000020	Listeria monocytogenes strain J2692 J2692-1.seq20, whole genome shotgun sequence	0 crisprs	WYL,csa3	0	0	1	0
NZ_JNGJ01000028	Listeria monocytogenes strain J2692 J2692-1.seq29, whole genome shotgun sequence	0 crisprs	NA	0	0	1	2
NZ_JNGJ01000008	Listeria monocytogenes strain J2692 J2692-1.seq8, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_JNGJ01000023	Listeria monocytogenes strain J2692 J2692-1.seq23, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_JNGJ01000024	Listeria monocytogenes strain J2692 J2692-1.seq24, whole genome shotgun sequence	2 crisprs	csn2,cas2,cas1,cas9	4	27	1	0
NZ_JNGJ01000019	Listeria monocytogenes strain J2692 J2692-1.seq19, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_JNGJ01000018	Listeria monocytogenes strain J2692 J2692-1.seq18, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_JNGJ01000006	Listeria monocytogenes strain J2692 J2692-1.seq6, whole genome shotgun sequence	1 crisprs	WYL,casR	2	4	0	0
NZ_JNGJ01000010	Listeria monocytogenes strain J2692 J2692-1.seq10, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_JNGJ01000014	Listeria monocytogenes strain J2692 J2692-1.seq14, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_JNGJ01000011	Listeria monocytogenes strain J2692 J2692-1.seq11, whole genome shotgun sequence	0 crisprs	NA	0	0	2	0
NZ_JNGJ01000025	Listeria monocytogenes strain J2692 J2692-1.seq25, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_JNGJ01000013	Listeria monocytogenes strain J2692 J2692-1.seq13, whole genome shotgun sequence	0 crisprs	NA	0	0	1	0
NZ_JNGJ01000002	Listeria monocytogenes strain J2692 J2692-1.seq2, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_JNGJ01000012	Listeria monocytogenes strain J2692 J2692-1.seq12, whole genome shotgun sequence	0 crisprs	cas3,DEDDh	0	0	2	0
NZ_JNGJ01000003	Listeria monocytogenes strain J2692 J2692-1.seq3, whole genome shotgun sequence	1 crisprs	cas3	0	0	0	0
NZ_JNGJ01000029	Listeria monocytogenes strain J2692 J2692-1.seq30, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_JNGJ01000026	Listeria monocytogenes strain J2692 J2692-1.seq26, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_JNGJ01000015	Listeria monocytogenes strain J2692 J2692-1.seq15, whole genome shotgun sequence	0 crisprs	DinG	0	0	0	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_JNGJ01000003_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_JNGJ01000003_1

37011-37162

Unclear

Consensus_repeat	Method
CCGCCACCACCTACGGATGAAGAGTTAAGACTTGCTTTGCCAGAGAC	CRISPRCasFinder

1 spacers

cas3

The CRISPR arrays of NZ_JNGJ01000003_1

>merge|NZ_JNGJ01000003|1|37011-37162|CRISPRCasFinder
CCGCCACCACCTACGGATGAAGAGTTAAGACTTGCTTTGCCAGAGACACCGATGCTTCTCGGTTTTAATGCTCCTACTCCATCGGAACCGAGCTCATTCGAATTTCCGCCGCCACCTACGGATGAAGAGTTAAGACTTGCTTTGCCAGAGAC

>NZ_JNGJ01000003|1|1|37011-37162|CRISPRCasFinder
CCGCCACCACCTACGGATGAAGAGTTAAGACTTGCTTTGCCAGAGAC	ACCGATGCTTCTCGGTTTTAATGCTCCTACTCCATCGGAACCGAGCTCATTCGAATTT
CCGCCGCCACCTACGGATGAAGAGTTAAGACTTGCTTTGCCAGAGAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_JNGJ01000003.1\|WP_003722725.1\|26839_27148_+\|septation-regulator-SpoVG	unknown	unknown	gnl\|CDD\|237321
NZ_JNGJ01000003.1\|WP_003722736.1\|39570_40032_+\|YehR-family-lipoprotein	unknown	unknown	gnl\|CDD\|227145
NZ_JNGJ01000003.1\|WP_014600414.1\|43871_44432_+\|aminoacyl-tRNA-hydrolase	unknown	unknown	gnl\|CDD\|235457
NZ_JNGJ01000003.1\|WP_003722739.1\|41232_42174_-\|L-lactate-dehydrogenase	unknown	unknown	gnl\|CDD\|178836
NZ_JNGJ01000003.1\|WP_003722727.1\|27962_29336_+\|bifunctional-UDP-N-acetylglucosamine-diphosphorylase/glucosamine-1-phosphate-N-acetyltransferase-GlmU	unknown	unknown	gnl\|CDD\|184643
NZ_JNGJ01000003.1\|WP_014600409.1\|31369_32323_-\|phosphatidylinositol-specific-phospholipase-C	unknown	unknown	gnl\|CDD\|176497
NZ_JNGJ01000003.1\|WP_003722740.1\|42467_43091_+\|50S-ribosomal-protein-L25/general-stress-protein-Ctc	unknown	unknown	gnl\|CDD\|235534
NZ_JNGJ01000003.1\|WP_014600413.1\|43180_43765_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379228
NZ_JNGJ01000003.1\|WP_014930805.1\|38171_39041_+\|phosphatidylcholine-phospholipase-C	unknown	unknown	gnl\|CDD\|214813
NZ_JNGJ01000003.1\|WP_003722723.1\|24257_24950_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213222
NZ_JNGJ01000003.1\|WP_003725735.1\|40082_40415_-\|putative-heavy-metal-binding-protein	unknown	unknown	gnl\|CDD\|179228
NZ_JNGJ01000003.1\|WP_003722728.1\|29386_30343_+\|ribose-phosphate-diphosphokinase	unknown	unknown	gnl\|CDD\|234929
NZ_JNGJ01000003.1\|WP_003722731.1\|32564_34154_+\|cholesterol-dependent-cytolysin-listeriolysin-O	unknown	unknown	gnl\|CDD\|366559
NZ_JNGJ01000003.1\|WP_003722729.1\|30385_31099_-\|listeriolysin-O-transcriptional-regulator-PrfA	unknown	unknown	gnl\|CDD\|223736
NZ_JNGJ01000003.1\|WP_003722735.1\|39112_39436_+\|DUF5502-family-protein	unknown	unknown	gnl\|CDD\|340321
NZ_JNGJ01000003.1\|WP_003722732.1\|34484_36017_+\|zinc-metalloproteinase-Mpl	unknown	unknown	gnl\|CDD\|225768
NZ_JNGJ01000003.1\|WP_003722726.1\|27267_27576_+\|septation-regulator-SpoVG	unknown	unknown	gnl\|CDD\|237321
NZ_JNGJ01000003.1\|WP_003722743.1\|44546_48086_+\|transcription-repair-coupling-factor	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|224118
NZ_JNGJ01000003.1\|WP_060571504.1\|40481_41156_-\|DNA-alkylation-repair-protein	unknown	unknown	gnl\|CDD\|378033
NZ_JNGJ01000003.1\|WP_003722724.1\|24946_26155_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|182528

Protein	Function_ID	Function_description	E-value
NZ_JNGJ01000003.1\|WP_003722725.1\|26839_27148_+\|septation-regulator-SpoVG	gnl\|CDD\|237321	PRK13259, PRK13259, septation regulator SpoVG.	2.92652e-53
NZ_JNGJ01000003.1\|WP_003722736.1\|39570_40032_+\|YehR-family-lipoprotein	gnl\|CDD\|227145	COG4808, COG4808, Uncharacterized protein conserved in bacteria [Function unknown].	5.22035e-59
NZ_JNGJ01000003.1\|WP_014600414.1\|43871_44432_+\|aminoacyl-tRNA-hydrolase	gnl\|CDD\|235457	PRK05426, PRK05426, peptidyl-tRNA hydrolase; Provisional.	1.9854e-107
NZ_JNGJ01000003.1\|WP_003722739.1\|41232_42174_-\|L-lactate-dehydrogenase	gnl\|CDD\|178836	PRK00066, ldh, L-lactate dehydrogenase; Reviewed.	0
NZ_JNGJ01000003.1\|WP_003722727.1\|27962_29336_+\|bifunctional-UDP-N-acetylglucosamine-diphosphorylase/glucosamine-1-phosphate-N-acetyltransferase-GlmU	gnl\|CDD\|184643	PRK14354, glmU, bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU.	0
NZ_JNGJ01000003.1\|WP_014600409.1\|31369_32323_-\|phosphatidylinositol-specific-phospholipase-C	gnl\|CDD\|176497	cd00137, PI-PLCc, Catalytic domain of prokaryotic and eukaryotic phosphoinositide-specific phospholipase C. This subfamily corresponds to the catalytic domain present in prokaryotic and eukaryotic phosphoinositide-specific phospholipase C (PI-PLC), which is a ubiquitous enzyme catalyzing the cleavage of the sn3-phosphodiester bond in the membrane phosphoinositides (phosphatidylinositol, PI; Phosphatidylinositol-4-phosphate, PIP; phosphatidylinositol 4,5-bisphosphate, PIP2) to yield inositol phosphates (inositol monosphosphate, InsP; inositol diphosphate, InsP2; inositol trisphosphate, InsP3) and diacylglycerol (DAG). The higher eukaryotic PI-PLCs (EC 3.1.4.11) have a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. They play a critical role in most signal transduction pathways, controlling numerous cellular events, such as cell growth, proliferation, excitation and secretion. These PI-PLCs strictly require Ca2+ for their catalytic activity. They display a clear preference towards the hydrolysis of the more highly phosphorylated PI-analogues, PIP2 and PIP, to generate two important second messengers, InsP3 and DAG. InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. In contrast, bacterial PI-PLCs contain a single catalytic domain. Although their precise physiological function remains unclear, bacterial PI-PLCs may function as virulence factors in some pathogenic bacteria. They participate in Ca2+-independent PI metabolism. They are characterized as phosphatidylinositol-specific phospholipase C (EC 4.6.1.13) that selectively hydrolyze PI, not PIP or PIP2. The TIM-barrel type catalytic domain in bacterial PI-PLCs is very similar to the one in eukaryotic PI-PLCs, in which the catalytic domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. The catalytic mechanism of both prokaryotic and eukaryotic PI-PLCs is based on general base and acid catalysis utilizing two well conserved histidines, and consists of two steps, a phosphotransfer and a phosphodiesterase reaction. This superfamily also includes a distinctly different type of eukaryotic PLC, glycosylphosphatidylinositol-specific phospholipase C (GPI-PLC), an integral membrane protein characterized in the protozoan parasite Trypanosoma brucei. T. brucei GPI-PLC hydrolyzes the GPI-anchor on the variant specific glycoprotein (VSG), releasing dimyristyl glycerol (DMG), which may facilitate the evasion of the protozoan to the host#s immune system. It does not require Ca2+ for its activity and is more closely related to bacterial PI-PLCs, but not mammalian PI-PLCs.	1.54768e-114
NZ_JNGJ01000003.1\|WP_003722740.1\|42467_43091_+\|50S-ribosomal-protein-L25/general-stress-protein-Ctc	gnl\|CDD\|235534	PRK05618, PRK05618, 50S ribosomal protein L25/general stress protein Ctc; Reviewed.	2.38585e-63
NZ_JNGJ01000003.1\|WP_014600413.1\|43180_43765_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379228	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	9.39888e-10
NZ_JNGJ01000003.1\|WP_014930805.1\|38171_39041_+\|phosphatidylcholine-phospholipase-C	gnl\|CDD\|214813	smart00770, Zn_dep_PLPC, Zinc dependent phospholipase C (alpha toxin). This domain conveys a zinc dependent phospholipase C activity (EC 3.1.4.3). It is found in a monomeric phospholipase C of Bacillus cereus as well as in the alpha toxin of Clostridium perfringens and Clostridium bifermentans, which is involved in haemolysis and cell rupture. It is also found in a lecithinase of Listeria monocytogenes, which is involved in breaking the 2-membrane vacuoles that surround the bacterium. Structure information: PDB 1ca1.	5.12776e-86
NZ_JNGJ01000003.1\|WP_003722723.1\|24257_24950_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213222	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein. This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of lipoproteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyzes the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.	7.27113e-121
NZ_JNGJ01000003.1\|WP_003725735.1\|40082_40415_-\|putative-heavy-metal-binding-protein	gnl\|CDD\|179228	PRK01119, PRK01119, putative heavy metal-binding protein.	8.98192e-61
NZ_JNGJ01000003.1\|WP_003722728.1\|29386_30343_+\|ribose-phosphate-diphosphokinase	gnl\|CDD\|234929	PRK01259, PRK01259, ribose-phosphate diphosphokinase.	0
NZ_JNGJ01000003.1\|WP_003722731.1\|32564_34154_+\|cholesterol-dependent-cytolysin-listeriolysin-O	gnl\|CDD\|366559	pfam01289, Thiol_cytolysin, Thiol-activated cytolysin.	1.50399e-178
NZ_JNGJ01000003.1\|WP_003722729.1\|30385_31099_-\|listeriolysin-O-transcriptional-regulator-PrfA	gnl\|CDD\|223736	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms].	9.59942e-12
NZ_JNGJ01000003.1\|WP_003722735.1\|39112_39436_+\|DUF5502-family-protein	gnl\|CDD\|340321	pfam17606, DUF5502, Family of unknown function (DUF5502). This is a family of unknown function found in Listeria.	5.76244e-49
NZ_JNGJ01000003.1\|WP_003722732.1\|34484_36017_+\|zinc-metalloproteinase-Mpl	gnl\|CDD\|225768	COG3227, LasB, Zinc metalloprotease (elastase) [Amino acid transport and metabolism].	3.90486e-139
NZ_JNGJ01000003.1\|WP_003722726.1\|27267_27576_+\|septation-regulator-SpoVG	gnl\|CDD\|237321	PRK13259, PRK13259, septation regulator SpoVG.	5.03804e-54
NZ_JNGJ01000003.1\|WP_003722743.1\|44546_48086_+\|transcription-repair-coupling-factor	gnl\|CDD\|224118	COG1197, Mfd, Transcription-repair coupling factor (superfamily II helicase) [DNA replication, recombination, and repair / Transcription].	0
NZ_JNGJ01000003.1\|WP_060571504.1\|40481_41156_-\|DNA-alkylation-repair-protein	gnl\|CDD\|378033	pfam08713, DNA_alkylation, DNA alkylation repair enzyme. Proteins in this family are predicted to be DNA alkylation repair enzymes. The structure of a hypothetical protein in this family shows it to adopt a supercoiled alpha helical structure.	2.6165e-21
NZ_JNGJ01000003.1\|WP_003722724.1\|24946_26155_+\|ABC-transporter-permease	gnl\|CDD\|182528	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB.	4.34799e-62

>NZ_JNGJ01000003.1|WP_003722732.1|34484_36017_+|zinc-metalloproteinase-Mpl
MKSKLICIIMVIAFQAHFTMTVKADSVGEEKLQNNTQAKKTPADLKALPDSCEAKDFYKNFKILDMTKDKLGVTHYTLALSSGGYLTDNDEIKVHVTPDNKITFINGDLQQGQLRITNQIKITEKNAIEKAFEAIGQSEAHVKSYVGNPVKEKEIILNSRTKRLVYNIKLIFAEPEVASWIVQVDAETGAILKKQNMLSEVERADTHKDFQALGKGANRLLQRPLHVMKINDLFYLVDRTHKGLIRTFDLKHNTDTSFGKVVSNKTNMFTDPEFSSAVDAHFYASEVYEYYKNVHQLESLDGKGGEIDSFVHYGLNCNNAFWDGQEILYGDGDKKNFKPFSCAKTIVGHELTHAVIQYSAGLEYEGQSGALNESFADVFGYFIAPNHWLIGEDVCVRGSRDGRIRSIKDPDKYNQAAHMKDYESLPITEEGDWGGVHYNSGIPNKAAYNTITKLGKEKTEQLYFRALKYYLTKKSQFTDAKKALQQAAKDLYGEDASKKVAEAWEAVGVN
>NZ_JNGJ01000003.1|WP_003722731.1|32564_34154_+|cholesterol-dependent-cytolysin-listeriolysin-O
MKKIMLVFITLILVSLPIAQQTEAKDASAFNKENSISSMAPPASPPASPKTPIEKKHADEIDKYIQGLDYNKNNVLVYHGDAVTNVPPRKGYKDGNEYIVVEKKKKSINQNNADIQVVNAISSLTYPGALVKANSELVENQPDVLPVKRDSLTLSIDLPGMTNQDNKIVVKNATKSNVNNAVNTLVERWNEKYAQAYPNVSAKIDYDDEMAYSESQLIAKFGTAFKAVNNSLNVNFGAISEGKMQEEVISFKQIYYNVNVNEPTRPSRFFGKAVTKEQLQALGVNAENPPAYISSVAYGRQVYLKLSTNSHSTKVKAAFDAAVSGKSVSGDVELTNIIKNSSFKAVIYGGSAKDEVQIIDGNLGDLRDILKKGATFNRETPGVPIAYTTNFLKDNELAVIKNNSEYIETTSKAYTDGKINIDHSGGYVAQFNISWDEVNYDPEGNEIVQHKNWSENNKSKLAHFTSSIYLPGNARNINVYAKECTGLAWEWWRTVIDDRNLPLVKNRNISIWGTTLYPKYSNKVDNPIE
>NZ_JNGJ01000003.1|WP_014600409.1|31369_32323_-|phosphatidylinositol-specific-phospholipase-C
MYKIYLRRTLVLVLCFILCFFTFPLGGKAYSLNNWNKPIKNSVTTKQWMSALPDTTNLAALSIPGTHDTMSYNGDMTWTLTKPLAQTQTMSLYQQLEAGIRYIDIRAKDNLKIYHGPIYLNASLSGVLETITQFLKKNPKETIIMRLKDEQNSNDSFDYRIQPLINIYKDYFYTTPRTDTSNKIPTLKDVRGKILLLSENHTKKPLVINSRKFGMQFGAPNQVIQDDYNGPSVKTKFKEIVQTAYQASKADNKLFLNHISATSLTFTPRQYAAALNNKVEQFVLNLTSEKVRGLGILIMDFPEKQTIKNIIKNNKFN
>NZ_JNGJ01000003.1|WP_003722729.1|30385_31099_-|listeriolysin-O-transcriptional-regulator-PrfA
MNAQAEEFKKYLETNGIKPKQFHKKELIFNQWDPQEYCIFLYDGITKLTSISENGTIMNLQYYKGAFVIMSGFIDTETSVGYYNLEVISEQATAYVIKINELKELLSKNLTHFFYVFQTLQKQVSYSLAKFNDFSINGKLGSICGQLLILTYVYGKETPDGIKITLDNLTMQELGYSSGIAHSSAVSRIISKLKQEKVIVYKNSCFYVQNLDYLKRYAPKLDEWFYLACPATWGKLN
>NZ_JNGJ01000003.1|WP_003722728.1|29386_30343_+|ribose-phosphate-diphosphokinase
MSNEYFDPKLKIFSLNSNRELAEEIAKEVGIELGKSSVTHFSDGEIQINIEESIRGCHVYVIQSTSNPVNQNLMELLIMIDALKRASAATINIVMPYYGYARQDRKARSREPITAKLVANLIETAGATRMITLDMHAPQIQGFFDIPIDHLNAVRLLSDYFSERHLGDDLVVVSPDHGGVTRARKMADRLKAPIAIIDKRRPRPNVAEVMNIVGNVEGKVCIIIDDIIDTAGTITLAAKALREAGATKVYACCSHPVLSGPAMKRIEESPIEKLVVTNSIALPEEKWIDKMEQLSVAALLGEAIVRVHENASVSSLFE
>NZ_JNGJ01000003.1|WP_003722727.1|27962_29336_+|bifunctional-UDP-N-acetylglucosamine-diphosphorylase/glucosamine-1-phosphate-N-acetyltransferase-GlmU
MSKRYAVVLAAGQGTRMKSKLYKVLHPVCGKPMVEHVVDQISTLNVDKVVTIVGHGAEKVQEHLAGKSEFVKQDEQLGTAHAVLQAKAELAGKDGVTLVVCGDTPLIEASTMEALLKYHHEKRAKATILTTVIEDPTGYGRIIRDDLGIVEKIVEHKDATEKEQRISEINTGTYCFDNKALFEALENVSNDNVQGEYYLPDVIKILKDSDEVVAAYRMESFEESLGVNDRIALAEASKLMQRRINENHMRNGVTLVNPESTYIDIDVKIGQDTVIEPGVMLRGKTVIGDDCVVTSGSEIVNSVIGERVHVRTSSIFESKVGDDVQIGPYAHLRPESDIHDHVKIGNYVETKKAVVGEGTKLPHFIYMGDAEIGKNVNVGCGSIAVNYDGKNKAKTIIGDNVFVGCNSNLIAPVKVGDRAFIAAGSTITKDVPEDALGIARAKQDNKLGYAKHLNHGK
>NZ_JNGJ01000003.1|WP_003722726.1|27267_27576_+|septation-regulator-SpoVG
MQVTDVRLRRVETDGRMRAIASITLDEEFVVHDIRVIDGNNGLFVAMPSKRGVDGEFRDIAHPINSDTRAKIQEVVLAEYERVGEEEATAVTEEESESVSAE
>NZ_JNGJ01000003.1|WP_003722725.1|26839_27148_+|septation-regulator-SpoVG
MEITDVRLRRVETDGRMKAISSITIDGEFVIHDIRVIDGNEGLFVAMPSKRTPDGEFRDIAHPINSGTRAKIQEAVLAAYEVADEPAVNEESSADESIVEEN
>NZ_JNGJ01000003.1|WP_003722724.1|24946_26155_+|ABC-transporter-permease
MNVLQSMKMAWKQLKASKLRSFLTMLGIIIGVASVILLVSLGNGVTQEVDDQMGDLGSNLITVVNSSVNPNDKYTYDEVMKYQNIDGVKSVSPELSGQVNATFDYKSSSNKVIGTNDQYKAARSLEMKEGRFLLPIDTEYGQKVAVIGSTVASDLFGFGDPIGETIRLNGMPYKVVGVLKEKGASMMGSSDDQIFIPISSAQRLLKDTNVRTIYVETKSAEDVDFVVNTLESRLAIKFGDEKEQEKNASSAQMGPSYQVINQQEILNAFNTISTTLTTALGAIAAISLVVGGIGIMNIMLVSVSERTREIGIRKALGAKKRAILLQFLIESIVISVCGGVIGIIIGVSGALIFGSVAGISSGITAGTIIFSFVFSLCIGVIFGIAPANKASKLRPIDALRSE
>NZ_JNGJ01000003.1|WP_003722723.1|24257_24950_+|ABC-transporter-ATP-binding-protein
MPKPLIDMKNLTKTYTLGGETFKALDDVTFTVEQGEFLSIVGPSGSGKSTLMNMIGCLDVPDEGSYHLDDVDVFKLSDNKLSEIRNKKIGFIFQQFNLLPKLSAFENVELPLIYAGLSVSAREKAAIECLEKVGLLEKRRNLPTQLSGGQQQRVAIARALAGKPQILLADEPTGALDSKTGKEVMGILQELNRAGNTIVMITHDPTIASYGTRSIRIQDGKLFHEEATQA
>NZ_JNGJ01000003.1|WP_014930805.1|38171_39041_+|phosphatidylcholine-phospholipase-C
MKFKNVVLGMCLTASVLVFPVTIKANACCDEYLQTPAAPHDIDSKLPHKLSWSADNPTNTDVNTHYWLFKQAEKILAKDVNHMRANLMNELKKFDKQIAQGIYDADHKNPYYDTSTFLSHFYNPDRDNTYLPGFANAKITGAKYFNQSVTDYREGKFDTAFYKLGLAIHYYTDISQPMHANNFTAISYPPGYHCAYENYVDTIKHNYQATEDMVAKRFCSDDVKDWLYENAKRAKADYPKIVNAKTKKSYLVGNSEWKKDTVEPTGARLRDSQQTLAGFLEFWSKKTNE
>NZ_JNGJ01000003.1|WP_003722735.1|39112_39436_+|DUF5502-family-protein
MYIKGRLIFFFVMFVIALCSVLILLIIKISVWKDEPFHLSDAKEIECLGSCEIKNTNQKIHFFSIKENLFEEKGDIAGILNEDEQKVADKSIFIVILDDEKGIANEE
>NZ_JNGJ01000003.1|WP_003722736.1|39570_40032_+|YehR-family-lipoprotein
MKMLKKGTAVLFVMIMAVMLVACGDKEETKTYTLSQNGVDSKLTYTYKGDKVTKQTAENTMSYASLGVASKEDAEKMLKATSDKFQGIDGLKEKIEYKDDKAIETLEVDYTKISSEDMNKIPGMSSNGDTSKGISMEESAKMLESQGYKEVSK
>NZ_JNGJ01000003.1|WP_003725735.1|40082_40415_-|putative-heavy-metal-binding-protein
MIVTTSPNIEGKQIIEYKKIVFGEVITGVNFMKDIGAGLRNFFGGRSQGYEDELINAREEAIREMEQRAKDIGANAVIGVDIDYEVLGADNGMLMVTASGTAVVIEAQDY
>NZ_JNGJ01000003.1|WP_060571504.1|40481_41156_-|DNA-alkylation-repair-protein
MITFDQLDTELQALENPNTIKIFRNHGCPDSLDLYGLKIGDLKKIIRREKLTKNHELAVKLIESNNSDLIYLGLLAINPNKITTEQIEKWNIAFRETWSQLTFGLASIVSKRDDALLFAKTWIESDYDLTKSMGWQIYSEHINNLPEAETLLQRAKETLQTETNRTRYSMNGFIITCGIYKDDLHEKAMEDAKSVGKVHVNLGNTACKVPDAISYIEKARNRTK
>NZ_JNGJ01000003.1|WP_003722739.1|41232_42174_-|L-lactate-dehydrogenase
MKDHQKIILVGDGAVGSSYAFACVNLSIGQEFGIIDIDKDRTIGDAMDLSHAVPFSTPKKIYSANYSDCHDADLVVVTAGTAQKPGETRLDLVNRNIKIMKGIVDEVMASGFDGIFLIASNPVDILTYATWKFSGLPKERVIGSGTSLDTARFRMSIADYLKVDARNVHGYILGEHGDTEFPAWSHTTVGGLPITEWISEDEQGAMDTIFVSVRDAAYEIINKKGATFYGVAAALARITKAILNNENAILPLSVYLDGHYGMNDIYIGAPAVVNRQGVRHIVEMNLNDKEKEQMKNSADTLKKVLDDAMKQID
>NZ_JNGJ01000003.1|WP_003722740.1|42467_43091_+|50S-ribosomal-protein-L25/general-stress-protein-Ctc
MATTLEVQKRETTQHSEVTRLRSEGKVPGIIYGYKSENVPVSVDSLELIKAVRDNGRNAVFSVTVDGKKLNVLLHEYQVDPLKDVLVHVDLLAVDMNEEVETDVRVVLVGDAPGVKAGGVLQQIIHDVKVSATPEKLPETIELDISSLEIGDVLTTNDLPENKDYVVQAEEEETVVTVSAPRAEEEPTTTEAPEPEAVHGKDEEPVE
>NZ_JNGJ01000003.1|WP_014600413.1|43180_43765_+|GNAT-family-N-acetyltransferase
MLDKSVPHISVIMVNHDATNYPEFHLPAGYSFCFYKDGLEEDWCRLQLETGQVLSMDSIRARFETEFGNEKEKLTKRCIFVKAPNGEIIGTAMLWDGNTFGKMESRIHWVAVLDSHGGKGIAKALLSKILGLNKSKFFYLTTQTGSYQAIYLYRKFGFEKYVGKTPENWKTVNFQEEKETAWQIIENKIAEHQA
>NZ_JNGJ01000003.1|WP_014600414.1|43871_44432_+|aminoacyl-tRNA-hydrolase
MKLIAGLGNPGKKYERTRHNVGFVVVDELSFRHQTPWKKSKFNGMTSEIIVGGEKMILVKPLTFMNASGECIRPLMDYYNIPIEDVVIVYDDLDLPVGKIRLRQKGSAGGHNGMKSIIQHVKTQEFNRIRVGVSRPLKGEVINYVLGDFPKAEQPDIIAAIQKSADAIEDFAQTPFIEVMNKYNQK
>NZ_JNGJ01000003.1|WP_003722743.1|44546_48086_+|transcription-repair-coupling-factor
MKGLQQLIYEQKDIRAVLNALDEKEKAQLVTGLTGSSRALFASVVEGASKRPVVFVTHNLYHAQKLYDDLLSLMDVDRLFLYPADELISSELSISSPELRGQRVEALDFLLSGKPGIVIVPVAGLRKMLPPVSLWKHFNISIVEGEEIDPDVLRQKLVTMGYTMSGMVNTPGEFSVRGGIIDIYPITEEFPIRIELFDTEVDSLRFFDVETQRSTTRVEEFRLLPATEIILDQSYYPDIVKRLEKKMMLTLNELKEQEDKQALIENLEEDLEMLRSGVKPDMFFKYIGLAYPDPASLFDYLPKNTAILLDEFGRILETEESLEREEAEWQTETLSRMETVRDVQVSHSFKKLLEGNHSPKIYLSLFQKQMASMRVSKTTNIVYKQMQQFHGQMNVLKTELESWHKNNYAVVILAPNLERAEKMQQTLTDYDMESTILKKESDVPKYGMVQFVIGTFQNGFELPLAKVAIISETELFNKKIKKVKKRQKLSNAERIQSYSELKVGDYVVHVNHGIARYVGMETLDINGVHKDYLLLVYQGEDKLFIPVDQLDLVQKYVGAEGKSPRLNKLGGAEWKRVKKKVQASVQDIADDLIKLYAEREAEKGYAFSADDEMQREFEEAFPYQETEDQLRSISEIKKDMERPRPMDRLLVGDVGYGKTEVALRAAFKAIMDGKQVAFLVPTTILAQQHFETMKERFQGFPIEIGLLSRFRTKKQQTETLKGMKNGTVDVVVGTHRLLSKDVEYQDLGLLIVDEEQRFGVTHKEKIKQMRSKIDVLTLTATPIPRTLHMSMLGVRDLSVIETPPANRFPVQTYVAEQNNVLVREAIERELARDGQVYYLYNRVESITQKADEISAMVPDARVATAHGQMGESELESVILSFLEGEFDVLVTTTIIETGVDIPNVNTLFVQDADRMGLSQLYQLRGRVGRWNRIAYAYFMYQKDKILREEAEKRLSAIKEFTELGSGFKIAMRDLSIRGAGNILGAQQHGFIDSVGFDLYSQMLKEAIEAKKPKEEQKQIVPVEIDIQADAYIPEYYITDGRQKIEMYKRFRNIETLSELEDLQSDMIDRFGEYPEEVEYLFTMTELKVHALEVGIESVKQEQNKITMLFSESGTAGIRGDIVMQIIGEFGRMVGVGMEGTQLKITINVQNKPLKEWLYQVKSLAEKLRGAMKEKASTEN

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

88112 : 96398

Prochlorococcus_phage(33.33%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014600928.1\|88112_88679_-	phosphoribosylglycinamide formyltransferase	E3SNR5	Prochlorococcus_phage	1.3e-26	39.1
WP_014600929.1\|88675_89725_-	phosphoribosylformylglycinamidine cyclo-ligase	Q58MH8	Prochlorococcus_phage	8.3e-64	44.4
WP_003722245.1\|89743_91171_-	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	1.1e-53	34.6
WP_014600930.1\|91155_93375_-	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	1.0e-159	41.2
WP_003733240.1\|93367_94051_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA
WP_003722248.1\|94054_94300_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA
WP_003733239.1\|94311_95025_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A0E3F9V5	Synechococcus_phage	2.7e-42	38.7
WP_014600931.1\|95105_96398_-	adenylosuccinate lyase	A0A1B3B081	Gordonia_phage	5.5e-17	32.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_JNGJ01000024

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_JNGJ01000024_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_JNGJ01000024_1

5218-7301

TypeII

II-A,II-B

Consensus_repeat	Method
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	CRISPRCasFinder
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	CRT
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	PILER-CR
AGTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	PILER-CR

31 spacers

csn2,cas2,cas1,cas9

The CRISPR arrays of NZ_JNGJ01000024_1

>merge|NZ_JNGJ01000024|1|5218-7301|CRISPRCasFinder,CRT,PILER-CR,PILER-CR
TATGTGTTGGTATTCAGAATAATGTATCTCTAAAACCAAGTTAAAGATATCAACTACATTCAGACAGTTTTGGTAGCATTCAAAATAACATAGCTCTAAAACAGCTTGCGTTTAGAGGACGAAGAAAAACTAGTTTTGGTAGCATTCAAAATAACATAGCTCTAAAACCCTTTGTTTAGTTTGTTTATCTATCTAACTGTTTTGGTAGCATTCAAAATAACATAGCTCTAAAACAACAAGAAAAAAGATCCAGACAATATTGCAGTTTTGGTAGCATTCAAAATAACATAGCTCTAAAACGCTGTTGCAACATGATCAAAAAAATTATTTGTTTTGGTAGCATTCAAAATAACATAGCTCTAAAACTAAGCGTAATATTAATGTCAAAGCTTCTAGGTTTTGGTAGCATTCAAAATAACATAGCTCTAAAACTGATGGATGACATTTCTAAGCAAATAACTAGTTTTGGTAGCATTCAAAATAACATAGCTCTAAAACAGTAATCTCCTTTTCCAAGGACCATCACGTGTTTTGGTAGCATTCAAAATAACATAGCTCTAAAACTTGATAGATAGTGTTAGAAGGGAAATTTAAGTTTTGGTAGCATTCAAAATAACATAGCTCTAAAACTTCAGACTATGTTTTCAACAAAGGGATGCTAGTTTTGGTAGCATTCAAAATAACATAGCTCTAAAACTCGCCTGTTTGGGCTGTGAACCGAGCTGTTGTTTTGGTAGCATTCAAAATAACATAGCTCTAAAACTCATAGTCTGTTGGAACATCTGCATGAACTGTTTTGGTAGCATTCAAAATAACATAGCTCTAAAACTTCCCAGCCGTAATAGATACTAAATTACCAGTTTTGGTAGCATTCAAAATAACATAGCTCTAAAACGTGTTTCTTTCCCACCTTCTGGTTCAACGCGTTTTGGTAGCATTCAAAATAACATAGCTCTAAAACGCTGCCTCGCTTTACTCTTCGTTATCTCCAGTTTTGGTAGCATTCAAAATAACATAGCTCTAAAACAACACACCGAGCAATAGAAATACACTGTTAGTTTTGGTAGCATTCAAAATAACATAGCTCTAAAACGAATAATCCGTACAGCCTTATCATTATCAAGTTTTGGTAGCATTCAAAATAACATAGCTCTAAAACGAAAAAGTTGTCGATCTTACAAAAAAATTCGTTTTGGTAGCATTCAAAATAACATAGCTCTAAAACACCAACGGCGCGCAAAAGAAAATCATTAAAGTTTTGGTAGCATTCAAAATAACATAGCTCTAAAACTGCGCACGCCAGTCTACACTTAGACTTGGTGTTTTGGTAGCATTCAAAATAACATAGCTCTAAAACGCTATAGAGATCCATTTAACCGTTTCATACGTTTTGGTAGCATTCAAAATAACATAGCTCTAAAACAGCGTCAGAGCCCTCTTCTTCCACACGTGTGTTTTGGTAGCATTCAAAATAACATAGCTCTAAAACGCGCTTCCCATCGATTTAAACGCATTTACAGTTTTGGTAGCATTCAAAATAACATAGCTCTAAAACCCTTTGGAGGAACTGAATTTACTGGCACTAGTTTTGGTAGCATTCAAAATAACATAGCTCTAAAACGCCTTGCTTGACCCAACTAGTGACTTCTTCGTTTTGGTAGCATTCAAAATAACATAGCTCTAAAACTTGTTGTCGTCGGGTAGTTCGCCCATATCTGTTTTGGTAGCATTCAAAATAACATAGCTCTAAAACATTCGTGAATGCCGACAATCGTTCATTTCCAGTTTTGGTAGCATTCAAAATAACATAGCTCTAAAACGGTGAGGTAAATCAATATAAAGATGCATTAGTTTTGGTAGCATTCAAAATAACATAGCTCTAAAACTCGTCCACTCTAGTAGCATCTAGGTCTAGGGTTTTGGTAGCATTCAAAATAACATAGCTCTAAAACGTCATTTTTAATAGTTTCAATTGCTGATAAGTTTTGGTAGCATTCAAAATAACATAGCTCTAAAACTCAAAAGCGCGCATGAGGAAGAAATCACGAGTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC

>NZ_JNGJ01000024|1|1|5218-7301|CRISPRCasFinder
TATGTGTTGGTATTCAGAATAATGTATCTCTAAAAC	CAAGTTAAAGATATCAACTACATTCAGACA
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	AGCTTGCGTTTAGAGGACGAAGAAAAACTA
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	CCTTTGTTTAGTTTGTTTATCTATCTAACT
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	AACAAGAAAAAAGATCCAGACAATATTGCA
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	GCTGTTGCAACATGATCAAAAAAATTATTT
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	TAAGCGTAATATTAATGTCAAAGCTTCTAG
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	TGATGGATGACATTTCTAAGCAAATAACTA
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	AGTAATCTCCTTTTCCAAGGACCATCACGT
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	TTGATAGATAGTGTTAGAAGGGAAATTTAA
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	TTCAGACTATGTTTTCAACAAAGGGATGCTA
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	TCGCCTGTTTGGGCTGTGAACCGAGCTGTT
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	TCATAGTCTGTTGGAACATCTGCATGAACT
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	TTCCCAGCCGTAATAGATACTAAATTACCA
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	GTGTTTCTTTCCCACCTTCTGGTTCAACGC
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	GCTGCCTCGCTTTACTCTTCGTTATCTCCA
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	AACACACCGAGCAATAGAAATACACTGTTA
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	GAATAATCCGTACAGCCTTATCATTATCAA
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	GAAAAAGTTGTCGATCTTACAAAAAAATTC
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	ACCAACGGCGCGCAAAAGAAAATCATTAAA
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	TGCGCACGCCAGTCTACACTTAGACTTGGT
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	GCTATAGAGATCCATTTAACCGTTTCATAC
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	AGCGTCAGAGCCCTCTTCTTCCACACGTGT
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	GCGCTTCCCATCGATTTAAACGCATTTACA
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	CCTTTGGAGGAACTGAATTTACTGGCACTA
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	GCCTTGCTTGACCCAACTAGTGACTTCTTC
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	TTGTTGTCGTCGGGTAGTTCGCCCATATCT
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	ATTCGTGAATGCCGACAATCGTTCATTTCCA
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	GGTGAGGTAAATCAATATAAAGATGCATTA
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	TCGTCCACTCTAGTAGCATCTAGGTCTAGG
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	GTCATTTTTAATAGTTTCAATTGCTGATAA
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	TCAAAAGCGCGCATGAGGAAGAAATCACGA
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC

>NZ_JNGJ01000024|1|1|5218-7301|CRT
TATGTGTTGGTATTCAGAATAATGTATCTCTAAAAC	CAAGTTAAAGATATCAACTACATTCAGACA
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	AGCTTGCGTTTAGAGGACGAAGAAAAACTA
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	CCTTTGTTTAGTTTGTTTATCTATCTAACT
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	AACAAGAAAAAAGATCCAGACAATATTGCA
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	GCTGTTGCAACATGATCAAAAAAATTATTT
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	TAAGCGTAATATTAATGTCAAAGCTTCTAG
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	TGATGGATGACATTTCTAAGCAAATAACTA
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	AGTAATCTCCTTTTCCAAGGACCATCACGT
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	TTGATAGATAGTGTTAGAAGGGAAATTTAA
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	TTCAGACTATGTTTTCAACAAAGGGATGCTA
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	TCGCCTGTTTGGGCTGTGAACCGAGCTGTT
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	TCATAGTCTGTTGGAACATCTGCATGAACT
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	TTCCCAGCCGTAATAGATACTAAATTACCA
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	GTGTTTCTTTCCCACCTTCTGGTTCAACGC
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	GCTGCCTCGCTTTACTCTTCGTTATCTCCA
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	AACACACCGAGCAATAGAAATACACTGTTA
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	GAATAATCCGTACAGCCTTATCATTATCAA
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	GAAAAAGTTGTCGATCTTACAAAAAAATTC
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	ACCAACGGCGCGCAAAAGAAAATCATTAAA
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	TGCGCACGCCAGTCTACACTTAGACTTGGT
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	GCTATAGAGATCCATTTAACCGTTTCATAC
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	AGCGTCAGAGCCCTCTTCTTCCACACGTGT
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	GCGCTTCCCATCGATTTAAACGCATTTACA
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	CCTTTGGAGGAACTGAATTTACTGGCACTA
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	GCCTTGCTTGACCCAACTAGTGACTTCTTC
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	TTGTTGTCGTCGGGTAGTTCGCCCATATCT
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	ATTCGTGAATGCCGACAATCGTTCATTTCCA
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	GGTGAGGTAAATCAATATAAAGATGCATTA
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	TCGTCCACTCTAGTAGCATCTAGGTCTAGG
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	GTCATTTTTAATAGTTTCAATTGCTGATAA
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	TCAAAAGCGCGCATGAGGAAGAAATCACGA
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC

>NZ_JNGJ01000024|1|1|5879-7301|PILER-CR
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	TCGCCTGTTTGGGCTGTGAACCGAGCTGTT
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	TCATAGTCTGTTGGAACATCTGCATGAACT
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	TTCCCAGCCGTAATAGATACTAAATTACCA
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	GTGTTTCTTTCCCACCTTCTGGTTCAACGC
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	GCTGCCTCGCTTTACTCTTCGTTATCTCCA
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	AACACACCGAGCAATAGAAATACACTGTTA
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	GAATAATCCGTACAGCCTTATCATTATCAA
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	GAAAAAGTTGTCGATCTTACAAAAAAATTC
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	ACCAACGGCGCGCAAAAGAAAATCATTAAA
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	TGCGCACGCCAGTCTACACTTAGACTTGGT
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	GCTATAGAGATCCATTTAACCGTTTCATAC
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	AGCGTCAGAGCCCTCTTCTTCCACACGTGT
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	GCGCTTCCCATCGATTTAAACGCATTTACA
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	CCTTTGGAGGAACTGAATTTACTGGCACTA
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	GCCTTGCTTGACCCAACTAGTGACTTCTTC
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	TTGTTGTCGTCGGGTAGTTCGCCCATATCT
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	ATTCGTGAATGCCGACAATCGTTCATTTCCA
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	GGTGAGGTAAATCAATATAAAGATGCATTAGTTTTGGTAGCATTCAAAATAACATAGCTCTAAAACTCGTCCACTCTAGTAGCATCTAGGTCTAGGGTTTTGGTAGCATTCAAAATAACATAGCTCTAAAACGTCATTTTTAATAGTTTCAATTGCTGATAAGTTTTGGTAGCATTCAAAATAACATAGCTCTAAAACTCAAAAGCGCGCATGAGGAAGAAATCACGA
	TCGTCCACTCTAGTAGCATCTAGGTCTAG
GGTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	GTCATTTTTAATAGTTTCAATTGCTGATA
AGTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	TCAAAAGCGCGCATGAGGAAGAAATCACG
AGTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC

>NZ_JNGJ01000024|1|2|7067-7301|PILER-CR
	TCGCCTGTTTGGGCTGTGAACCGAGCTGTT
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	TCATAGTCTGTTGGAACATCTGCATGAACT
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	TTCCCAGCCGTAATAGATACTAAATTACCA
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	GTGTTTCTTTCCCACCTTCTGGTTCAACGC
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	GCTGCCTCGCTTTACTCTTCGTTATCTCCA
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	AACACACCGAGCAATAGAAATACACTGTTA
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	GAATAATCCGTACAGCCTTATCATTATCAA
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	GAAAAAGTTGTCGATCTTACAAAAAAATTC
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	ACCAACGGCGCGCAAAAGAAAATCATTAAA
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	TGCGCACGCCAGTCTACACTTAGACTTGGT
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	GCTATAGAGATCCATTTAACCGTTTCATAC
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	AGCGTCAGAGCCCTCTTCTTCCACACGTGT
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	GCGCTTCCCATCGATTTAAACGCATTTACA
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	CCTTTGGAGGAACTGAATTTACTGGCACTA
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	GCCTTGCTTGACCCAACTAGTGACTTCTTC
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	TTGTTGTCGTCGGGTAGTTCGCCCATATCT
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	ATTCGTGAATGCCGACAATCGTTCATTTCCA
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	GGTGAGGTAAATCAATATAAAGATGCATTAGTTTTGGTAGCATTCAAAATAACATAGCTCTAAAACTCGTCCACTCTAGTAGCATCTAGGTCTAGGGTTTTGGTAGCATTCAAAATAACATAGCTCTAAAACGTCATTTTTAATAGTTTCAATTGCTGATAAGTTTTGGTAGCATTCAAAATAACATAGCTCTAAAACTCAAAAGCGCGCATGAGGAAGAAATCACGA
	TCGTCCACTCTAGTAGCATCTAGGTCTAG
GGTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	GTCATTTTTAATAGTTTCAATTGCTGATA
AGTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	TCAAAAGCGCGCATGAGGAAGAAATCACG
AGTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_JNGJ01000024.1\|WP_003733033.1\|16302_17100_-\|energy-coupling-factor-transporter-transmembrane-protein-EcfT	unknown	unknown	gnl\|CDD\|223692
NZ_JNGJ01000024.1\|WP_014601171.1\|8419_9286_-\|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|187851
NZ_JNGJ01000024.1\|WP_014601168.1\|4310_4670_-\|hypothetical-protein	unknown	unknown	unknown
NZ_JNGJ01000024.1\|WP_003727703.1\|14918_15356_-\|50S-ribosomal-protein-L13	unknown	unknown	gnl\|CDD\|181703
NZ_JNGJ01000024.1\|WP_003723652.1\|14504_14897_-\|30S-ribosomal-protein-S9	unknown	unknown	gnl\|CDD\|178888
NZ_JNGJ01000024.1\|WP_014601170.1\|7429_8092_-\|type-II-A-CRISPR-associated-protein-Csn2	csn2	cd09758_csn2_CAS-II-A	gnl\|CDD\|213408
NZ_JNGJ01000024.1\|WP_003728531.1\|17102_17969_-\|energy-coupling-factor-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|237454
NZ_JNGJ01000024.1\|WP_003734937.1\|3766_4189_-\|MerR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|133384
NZ_JNGJ01000024.1\|WP_003733022.1\|28_1057_-\|Mrp/NBP35-family-ATP-binding-protein	unknown	unknown	gnl\|CDD\|378455
NZ_JNGJ01000024.1\|WP_003723644.1\|2893_3745_-\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381359
NZ_JNGJ01000024.1\|WP_014601173.1\|13800_14280_-\|hypothetical-protein	unknown	unknown	unknown
NZ_JNGJ01000024.1\|WP_003723648.1\|8081_8423_-\|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226043
NZ_JNGJ01000024.1\|WP_014601167.1\|1325_2852_+\|GW-domain-containing-glycosaminoglycan-binding-protein	unknown	unknown	gnl\|CDD\|224619
NZ_JNGJ01000024.1\|WP_014601172.1\|9286_13291_-\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	COG3513_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226044
NZ_JNGJ01000024.1\|WP_003733032.1\|15550_16297_-\|tRNA-pseudouridine(38-40)-synthase-TruA	unknown	unknown	gnl\|CDD\|234577

Protein	Function_ID	Function_description	E-value
NZ_JNGJ01000024.1\|WP_003733033.1\|16302_17100_-\|energy-coupling-factor-transporter-transmembrane-protein-EcfT	gnl\|CDD\|223692	COG0619, CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters [Inorganic ion transport and metabolism].	5.34175e-53
NZ_JNGJ01000024.1\|WP_014601171.1\|8419_9286_-\|type-II-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|187851	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer intergration. Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	1.276e-135
NZ_JNGJ01000024.1\|WP_014601167.1\|1325_2852_+\|GW-domain-containing-glycosaminoglycan-binding-protein	gnl\|CDD\|224619	COG1705, FlgJ, Muramidase (flagellum-specific) [Cell motility and secretion / Intracellular trafficking and secretion].	7.69416e-69
NZ_JNGJ01000024.1\|WP_003723652.1\|14504_14897_-\|30S-ribosomal-protein-S9	gnl\|CDD\|178888	PRK00132, rpsI, 30S ribosomal protein S9; Reviewed.	4.44953e-85
NZ_JNGJ01000024.1\|WP_003723648.1\|8081_8423_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	2.60762e-45
NZ_JNGJ01000024.1\|WP_014601170.1\|7429_8092_-\|type-II-A-CRISPR-associated-protein-Csn2	gnl\|CDD\|213408	cd09758, Csn2, CRISPR/Cas system-associated protein Csn2. Csn2 is a Nmeni subtype-specific Cas protein, which may function in the adaptation process which mediates the incorporation of foreign nucleic acids into the microbial host genome. Csn 2 may interact directly with double-stranded DNA. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA. Csn2 has been predicted to be a functional analog of Cas4 based on anti-correlated phyletic patterns; also known as SPy1049 family.	1.19204e-113
NZ_JNGJ01000024.1\|WP_003728531.1\|17102_17969_-\|energy-coupling-factor-ABC-transporter-ATP-binding-protein	gnl\|CDD\|237454	PRK13634, cbiO, cobalt transporter ATP-binding subunit; Provisional.	0
NZ_JNGJ01000024.1\|WP_003734937.1\|3766_4189_-\|MerR-family-transcriptional-regulator	gnl\|CDD\|133384	cd01109, HTH_YyaN, Helix-Turn-Helix DNA binding domain of the MerR-like transcription regulators YyaN and YraB. Putative helix-turn-helix (HTH) MerR-like transcription regulators of Bacillus subtilis, YyaN and YraB, and related proteins; N-terminal domain. Based on sequence similarity, these proteins are predicted to function as transcription regulators that mediate responses to stress in eubacteria. They belong to the MerR superfamily of transcription regulators that promote transcription of various stress regulons by reconfiguring the operator sequence located between the -35 and -10 promoter elements. A typical MerR regulator is comprised of distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their N-terminal domains are homologous and contain a DNA-binding winged HTH motif, while the C-terminal domains are often dissimilar and bind specific coactivator molecules such as metal ions, drugs, and organic substrates.	5.12858e-42
NZ_JNGJ01000024.1\|WP_003733022.1\|28_1057_-\|Mrp/NBP35-family-ATP-binding-protein	gnl\|CDD\|378455	pfam10609, ParA, NUBPL iron-transfer P-loop NTPase. This family contains ATPases involved in plasmid partitioning. It also contains the cytosolic Fe-S cluster assembling factor NBP35 which is required for biogenesis and export of both ribosomal subunits.	3.84035e-115
NZ_JNGJ01000024.1\|WP_003723644.1\|2893_3745_-\|aldo/keto-reductase	gnl\|CDD\|381359	cd19133, AKR_AKR5F1, the AKR5F family of aldo-keto reductase (AKR). Klebsiella sp. 2,5-diketo-D-gluconic acid reductase (2,5-DKG reductase) is a founding member of aldo-keto reductase family 5 member F1 (AKR5F1). It catalyzes the reduction of 2,5-diketo-D-gluconic acid (25DKG) to 2-keto-L-gulonic acid (2KLG).	5.13526e-171
NZ_JNGJ01000024.1\|WP_003733032.1\|15550_16297_-\|tRNA-pseudouridine(38-40)-synthase-TruA	gnl\|CDD\|234577	PRK00021, truA, tRNA pseudouridine(38-40) synthase TruA.	2.82266e-128
NZ_JNGJ01000024.1\|WP_003727703.1\|14918_15356_-\|50S-ribosomal-protein-L13	gnl\|CDD\|181703	PRK09216, rplM, 50S ribosomal protein L13; Reviewed.	2.08607e-102
NZ_JNGJ01000024.1\|WP_014601172.1\|9286_13291_-\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	gnl\|CDD\|226044	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms].	0

>NZ_JNGJ01000024.1|WP_014601168.1|4310_4670_-|hypothetical-protein
MKKTSIIFILCALLSITACSNTENETQATEATGTIEQVETDAILINNFKEKKDKYNPEAAIRFDIVDKYYDETGNKIKITDLNKNDDVKIILTNDFPIRETNPAQIDPKYVQKIIRLNK
>NZ_JNGJ01000024.1|WP_003734937.1|3766_4189_-|MerR-family-transcriptional-regulator
MNIKQAADMFGLTVDTLRYYERVGVIPPVHRNESGYRDYKTSDLNWVYLVKNLRNAGLSVESLIEFATLAQLRETQNVEAAQKQVLVDQLKELDEKLAEMKKVRELLVYKIDSYDSHIAQFKAGELNADNVEKLWERDKF
>NZ_JNGJ01000024.1|WP_003723644.1|2893_3745_-|aldo/keto-reductase
MKTVKLNNGVEVPILGFGTYQITDAAEAEQAVKDAIKTGYRHIDTAQSYMNEEAVGRGIAASGVDRKELFITTKIWVENVSYKGVMSSFDRSLKRLGLDYVDLLLIHQPFNDVYGAWIAMEELQASGKIRAIGVSNFSPDRVIDLAAFNEVTPQVNQIEVNPFQQQTANLAILRKEGVAIEAWAPFAEGKNDVFNNPVLTKIGAKYGKSAAQVILRWLVEQDIIVLAKSVKPERMAQNLAIFDFELTEADKEEIAGLNQGESQFFSHADPEMVKWMASRKLNV
>NZ_JNGJ01000024.1|WP_014601167.1|1325_2852_+|GW-domain-containing-glycosaminoglycan-binding-protein
MDRKFIKPGIILLIVAFLVVSINVGAETGGSRTAQVNLTTSQQAFIDEILPAAQDGYRDGKLLTSVTLAQAILESNWGESGLSQNSNNLFGIKGTYKGKSVSMGTMEASGSTTANFRVYPSWKESIEDHTALITENARYQDAVGETNYRKALQAIKDGGYATDPDYVSKLVAIIERYNLDKYDVIYDKIDSNQSLAAIGTVAENKKQEVIWSAPYNTENANKIGTLENYSGRNLEISWEAKTEKGLWYFIREKNKDIGWINSNALKISYHQKEDENVHLTKYVDDLSAHVYRLPSPEKQFDNGTIAKYDRKALEADKKITRGGYAWFRISEGEKVIGWVRADKLNDRLYDRITEQTSYDGYALVSKSATDNVWTAPFNTKNAEKLAPLADYDNEKLELVTRAKAGNTLWYQFKVDGKLVGWASEKDLNVFYTPAKEEPVKQVAYVKDPTAKLYNKPVESTSTNPKAVGFYYGKLLAVDKTATILGEDWLHLKDSQNSLGWIKAIDINS
>NZ_JNGJ01000024.1|WP_003733022.1|28_1057_-|Mrp/NBP35-family-ATP-binding-protein
MLNEQQITRLLYRLQDPVLEASLEETEGVLEVQVLEETANIKIALADPAVETDHFVHNIEELLTQFGVNEINIELEYLPAAVIDRIFQARDNILSEASETKFLAIASGKGGVGKSTVSANLAIALAQQGKKVGLLDADIYGFSIPVLLGTTESPHKENGQIIPVETHGIQMISMDFFVEQGEPVIWRGPMLGKMIKMFLEEVRWGKLDYLLIDLPPGTGDVALDIHTLIPKCNELIVTTPHYAAASVASRAGYMAAKNNHKIIGVIENMSYLTLADGQVLKVFGQGGGEKVAADLETQLLIQLPIEQPEPNGNGYVSALFNSSSTSGKAYKTLAEKIIPYLS
>NZ_JNGJ01000024.1|WP_014601170.1|7429_8092_-|type-II-A-CRISPR-associated-protein-Csn2
MNFNFKLLDDPIQIEDSTIFVIEDVRVFANVTRFFYQYEEIEELTIFDAKHQPLKSSELMLITDVLGHDINSAATLKLIYADLEQQLNEKPEVKSMIDKLTATISELIGYELLEHELDLEEDEITVIELFKALGIKIETKSDTVFEKLIEIVQVYKYLSKKKLLVLINVCSYLTEEELLELRRYISLYQVKVLFIEPRKIKGSPQVTLDSDYFLHVENSV
>NZ_JNGJ01000024.1|WP_003723648.1|8081_8423_-|CRISPR-associated-endonuclease-Cas2
MSYRYMRMLLMFDMPTDTAKERKAYRQFRRFILSEGFIMHQYSVYSKILLNGTASKAMLARLKQQNPKKGLITLLTVTEKQFARMVYLSGEQNKSIGNSDARLVFLGDDADEF
>NZ_JNGJ01000024.1|WP_014601171.1|8419_9286_-|type-II-CRISPR-associated-endonuclease-Cas1
MGWRTVVVNSHSKLSYKNQHLVFKSAYQQEMIHLSEIDVLILETTDITLTTMLINCLVAENILILFCDDKRLPIGKVLPFYGRHDSSLQLTKQLEWDAELKAAVWTEIISQKILNQSTYLSMLNYDEKASSLINLHETLAVFDPTNREGHAARIYFNQLFGNDFTREQENDINSGLNYGYTLLLSIFARELVKSGCMTQFGLKHANQFNDFNLASDLMEPFRPLVDQIVYEKRNEDFQVIKRSLFELFTKQFDYNDQHMFLTNIASDYTKKIVKVLNEEREGVPEFRI
>NZ_JNGJ01000024.1|WP_014601172.1|9286_13291_-|type-II-CRISPR-RNA-guided-endonuclease-Cas9
MKNPYTIGLDIGTNSVGWAVLTNQYDLVKRKMKVAGNSDKKQIKKNFWGVRLFDDGQTAVDRRMNRTARRRIERRRNRISYLQEIFAVEMANIDANFFCRLNDSFYVDSEKRNSRHPFFATIEEEVAYHKNYRTIYHLREELVNSSEKADLRLVYLALAHIIKYRGNFLIEGALDTKNTSVDGVYEQFIQTYNQVFMSNIEEGTLAKVEENIEVANILAGKFTRREKFERILQLYPGEKSTGMFAQFISLIVGSKGNFQKVFDLIEKTDIECAKDSYEEDLEALLAIIGDEYAELFVAAKNTYNAVVLSSIITVTATETNAKLSASMIERFDAHEKDLGELKAFIKLHLPKQYQEIFNNAAIDGYAGYIDGKTKQVDFYKYLKTILENIEGADYFIAKIEEENFLRKQRTFDNGAIPHQLHLEELEAIIHQQAKYYPFLREDYEKIKSLVTFRIPYFVGPLAKGQSEFAWLTRKADGEIRPWNIEEKVDFGKSAVDFIEKMTNKDTYLPKENVLPKHSLCYQKYMVYNELTKVRYIDDQGKTNYFSGQEKQQIFNDLFKQKRKVKKKDLELFLRNINHIESPTIEGLEDSFNASYATYHDLLKVGMKQEILDNPLNTEMLEDIVKILTVFEDKPMIKEQLQQFSDVLDGGVLKKLERRHYTGWGRLSAKLLVGIREKQSHLTILDYLMNDDGLNRNLMQLINDSNLSFKSIIEKEQVSTTDKDLQSIVADLAGSPAIKKGILQSLKIVDELVSIMGYPPQTIVVEMARENQTTGKGKNNSKPRYKSLEKAIKEFGSKILKEHPTDNQELKNNRLYLYYLQNGKDMYTGQELDIHNLSNYDIDHIVPQSFITDNSIDNLVLTSSAGNREKGGDVPPLEIVRKRKVFWEKLYQGNLMSKRKFDYLTKAERGGLTDADKARFIHRQLVETRQITKNVANILHQRFNNETDNHGNTMEQVRIVTLKSALVSQFRKQFQLYKVREVNDYHHAHDAYLNGVVANTLLKVYPQLEPEFVYGEYHQFDWFKANKATAKKQFYTNIMLFFGQKERIIDENGEILWDKKYLETIKKVLDYRQMNIVKKTEIQKGEFSKATIKPKGNSSKLIPRKENWDPMKYGGLDSPNMAYAVIIEHAKGKKKLIFEKKIIRITIMERKMFEKDEEAFLEEKGYRHPKVLTKLPKYTLYECEKGRRRMLASANEAQKGNQLVLSNHLVSLLYHAKNCEASDGKSLKYIEAHRETFSELLAQVSEFATRYTLADANLSKINNLFEQNKEGDIQAIAQSFVDLMAFNAMGAPASFKFFEATIDRKRYTNLKELLSSTIIYQSITGLYESRKRLDD
>NZ_JNGJ01000024.1|WP_014601173.1|13800_14280_-|hypothetical-protein
MKGLIINKMHSGYFTNMSEVFNLLPEEELNCMWLVSSYECNIYPFEQIPFEEEYVWMKGTELKEILNQEEVMFIWGNFTSYPSNTKLKDILKYPIPFADGNSDLWKKDVHLSNPLSNTELISWDSSIFLALSKNTNLIEGLKDNYPDSEDLSTYNSDID
>NZ_JNGJ01000024.1|WP_003723652.1|14504_14897_-|30S-ribosomal-protein-S9
MAQVQYYGTGRRKSSVARVRLVPGDGKIVINNRDWEDYIPFAALREVIKQPLVATETLGNYDVLVNVHGGGYTGQAGAIRHGVARALLQVAPEYRPALKSAGLLTRDSRMKERKKPGLKGARRAPQFSKR
>NZ_JNGJ01000024.1|WP_003727703.1|14918_15356_-|50S-ribosomal-protein-L13
MRTTYMAKPGEVERKWYVIDATGVSLGRLSSEVASILRGKNKPQFTPHIDTGDFVIIINAGKIGLTGKKATDKIYYRHSQYPGGLKSRTAGEMRTNNPEKLLELSIKGMLPKNSLGRQLFKKLHVYGGSEHEHAAQQPEVYELRG
>NZ_JNGJ01000024.1|WP_003733032.1|15550_16297_-|tRNA-pseudouridine(38-40)-synthase-TruA
MTRYKAIISYDGSGFYGYQVQPNTRTVQAEIEKALTKMHKGKTVRVTASGRTDTGVHAKGQVIHFDSELDITAEKFQKALQVMTPFDISFLTVEEVPDDFHARFGTVGKEYRYVVKRTKIFDPFSRNFALHYPYELDISKMKLASKRLIGEHDFTSFCSARTERDSKVRTLYSIDFYEEDDETLVIAFQGNGFLYNMVRILTGTLLDAGQGRISPDDISEALLARDRQKLISKTAPPQGLYLWRVDYE
>NZ_JNGJ01000024.1|WP_003733033.1|16302_17100_-|energy-coupling-factor-transporter-transmembrane-protein-EcfT
MMDKMILGRYIPGNSWLHRIDPRAKITAVMAFIAIVFLANNWLTYALMFVYVLYLVLTSKVPFLFFIKGLQPIFWLILITLLLQVFFTKGGTVLVDLGLLQITTLGLANGAMMFCRFVLIIFMTTLLTLTTSPIELTDGLEKILAPFRLVHLPVHELALMLSISLRFIPTLMDETEKILKAQKARGVEFTSGKWSDRIKAIIPLLVPLFISAFKRAEDLAIAMEARGYRGGKGRTRFRLLRWRFADTFLLISLAVLSGLLFWLRS
>NZ_JNGJ01000024.1|WP_003728531.1|17102_17969_-|energy-coupling-factor-ABC-transporter-ATP-binding-protein
MEIKLEQLGYCYQKNSPFEKRALLDVNVSFDSGSYSAIIGHTGSGKSTLLQHLNALLMPTEGKITVGDREIVAGVKQKKLRDLRKKVGIVFQFPEAQLFEETVEKDICFGPMNFGVSEEDAKLRAKKVIYEVGLTEEILSRSPFELSGGQMRRVAIAGVLAMDPEVLVLDEPTAGLDPHGREEIMEMFYNLHKEKGLTTVLVTHSMEDAARYAEKIVLMKAGTVLQIGTPREIFAKPDELVDLGLSVPDVVRFQGLFERKFDVKLTKTCLTIDELTTEMAPYLAKGGA

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Crispr_ID: NZ_JNGJ01000024_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_JNGJ01000024_2

109949-110059

Orphan

Consensus_repeat	Method
AGCGATGATTTAATCCTTCCCAGAACTTTCAAAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_JNGJ01000024_2

>merge|NZ_JNGJ01000024|2|109949-110059|CRISPRCasFinder
AGCGATGATTTAATCCTTCCCAGAACTTTCAAAATGTACTTTATTTTGATTTAGTTCTTCAATATAAATCTGAGCAAAGCGATGATTTAATCCTTCCCAGAAGTTTCAAAA

>NZ_JNGJ01000024|2|2|109949-110059|CRISPRCasFinder
AGCGATGATTTAATCCTTCCCAGAACTTTCAAAA	TGTACTTTATTTTGATTTAGTTCTTCAATATAAATCTGAGCAA
AGCGATGATTTAATCCTTCCCAGAAGTTTCAAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_JNGJ01000024.1\|WP_003722069.1\|112991_113147_+\|hypothetical-protein	unknown	unknown	unknown
NZ_JNGJ01000024.1\|WP_014601197.1\|104935_105775_+\|Cof-type-HAD-IIB-family-hydrolase	unknown	unknown	gnl\|CDD\|319818
NZ_JNGJ01000024.1\|WP_014601198.1\|105895_106738_+\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|223729
NZ_JNGJ01000024.1\|WP_003722065.1\|110161_110626_-\|DUF3284-domain-containing-protein	unknown	unknown	gnl\|CDD\|378692
NZ_JNGJ01000024.1\|WP_003732088.1\|116147_117086_-\|GW-domain-containing-glycosaminoglycan-binding-protein	unknown	unknown	gnl\|CDD\|226309
NZ_JNGJ01000024.1\|WP_003732089.1\|118216_119956_-\|thiol-reductant-ABC-exporter-subunit-CydC	unknown	unknown	gnl\|CDD\|227320
NZ_JNGJ01000024.1\|WP_003732079.1\|101874_102864_+\|dihydroxyacetone-kinase-subunit-DhaK	unknown	unknown	gnl\|CDD\|237724
NZ_JNGJ01000024.1\|WP_003722067.1\|110828_111050_-\|hypothetical-protein	unknown	unknown	unknown
NZ_JNGJ01000024.1\|WP_014931034.1\|114518_116033_-\|gluconokinase	unknown	unknown	gnl\|CDD\|212659
NZ_JNGJ01000024.1\|WP_003722062.1\|107043_107640_-\|recombination-protein-RecR	unknown	unknown	gnl\|CDD\|234616
NZ_JNGJ01000024.1\|WP_003722074.1\|117128_118076_-\|LPXTG-cell-wall-anchor-domain-containing-protein	unknown	unknown	gnl\|CDD\|273478
NZ_JNGJ01000024.1\|WP_003722058.1\|103965_104817_+\|MurR/RpiR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224651
NZ_JNGJ01000024.1\|WP_003722070.1\|113179_113821_-\|hypothetical-protein	unknown	unknown	unknown
NZ_JNGJ01000024.1\|WP_014601199.1\|108095_109835_-\|DNA-polymerase-III-subunit-gamma/tau	unknown	unknown	gnl\|CDD\|235505
NZ_JNGJ01000024.1\|WP_014601196.1\|103485_103860_+\|PTS-dependent-dihydroxyacetone-kinase-phosphotransferase-subunit-DhaM	unknown	unknown	gnl\|CDD\|184702
NZ_JNGJ01000024.1\|WP_003725004.1\|111184_112549_-\|PTS-sugar-transporter-subunit-IIC	unknown	unknown	gnl\|CDD\|224372
NZ_JNGJ01000024.1\|WP_003727657.1\|110643_110826_-\|DUF3188-domain-containing-protein	unknown	unknown	gnl\|CDD\|371501
NZ_JNGJ01000024.1\|WP_003722061.1\|106783_107029_-\|YaaL-family-protein	unknown	unknown	gnl\|CDD\|378478
NZ_JNGJ01000024.1\|WP_003722063.1\|107748_108066_-\|YbaB/EbfC-family-nucleoid-associated-protein	unknown	unknown	gnl\|CDD\|234669
NZ_JNGJ01000024.1\|WP_012951102.1\|102885_103482_+\|dihydroxyacetone-kinase-subunit-L	unknown	unknown	gnl\|CDD\|274099

Protein	Function_ID	Function_description	E-value
NZ_JNGJ01000024.1\|WP_014601197.1\|104935_105775_+\|Cof-type-HAD-IIB-family-hydrolase	gnl\|CDD\|319818	cd07516, HAD_Pase, phosphatase, similar to Escherichia coli Cof and Thermotoga maritima TM0651; belongs to the haloacid dehalogenase-like superfamily. Escherichia coli Cof is involved in the hydrolysis of HMP-PP (4-amino-2-methyl-5-hydroxymethylpyrimidine pyrophosphate, an intermediate in thiamin biosynthesis), Cof also has phosphatase activity against the coenzymes pyridoxal phosphate (PLP) and FMN. Thermotoga maritima TM0651 acts as a phosphatase with a phosphorylated carbohydrate molecule as a possible substrate. Escherichia coli YbhA is also a member of this family and catalyzes the dephosphorylation of PLP, YbhA can also hydrolyze erythrose-4-phosphate and fructose-1,6-bis-phosphate. Members of this family belong to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	3.80739e-85
NZ_JNGJ01000024.1\|WP_014601198.1\|105895_106738_+\|aldo/keto-reductase	gnl\|CDD\|223729	COG0656, ARA1, Aldo/keto reductases, related to diketogulonate reductase [General function prediction only].	3.11817e-130
NZ_JNGJ01000024.1\|WP_003722065.1\|110161_110626_-\|DUF3284-domain-containing-protein	gnl\|CDD\|378692	pfam11687, DUF3284, Domain of unknown function (DUF3284). This family of proteins with unknown function appears to be restricted to Firmicutes.	5.35099e-31
NZ_JNGJ01000024.1\|WP_003732088.1\|116147_117086_-\|GW-domain-containing-glycosaminoglycan-binding-protein	gnl\|CDD\|226309	COG3786, COG3786, Uncharacterized protein conserved in bacteria [Function unknown].	3.04876e-98
NZ_JNGJ01000024.1\|WP_003732079.1\|101874_102864_+\|dihydroxyacetone-kinase-subunit-DhaK	gnl\|CDD\|237724	PRK14481, PRK14481, dihydroxyacetone kinase subunit DhaK; Provisional.	0
NZ_JNGJ01000024.1\|WP_003732089.1\|118216_119956_-\|thiol-reductant-ABC-exporter-subunit-CydC	gnl\|CDD\|227320	COG4987, CydC, ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones].	0
NZ_JNGJ01000024.1\|WP_014931034.1\|114518_116033_-\|gluconokinase	gnl\|CDD\|212659	cd07770, FGGY_GntK, Gluconate kinases; a subfamily of the FGGY family of carbohydrate kinases. This subfamily is composed of a group of gluconate kinases (GntK, also known as gluconokinase; EC 2.7.1.12) encoded by the gntK gene, which catalyzes the ATP-dependent phosphorylation of D-gluconate and produce 6-phospho-D-gluconate and ADP. The presence of Mg2+ might be required for catalytic activity. The prototypical member of this subfamily is GntK from Lactobacillus acidophilus. Unlike Escherichia coli GntK, which belongs to the superfamily of P-loop containing nucleoside triphosphate hydrolases, members in this subfamily are homologous to glycerol kinase, xylulose kinase, and rhamnulokinase from Escherichia coli. They have been classified as members of the FGGY family of carbohydrate kinases, which contain two large domains separated by a deep cleft that forms the active site. This model spans both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain. Some uncharacterized homologous sequences are also included in this subfamily. The Lactobacillus gnt operon contains a single gntK gene. The gnt operons of some bacteria, such as Corynebacterium glutamicum, have two gntK genes. For example, the C. glutamicum gnt operon has both a gluconate kinase gntV gene (also known as gntK) and a second hypothetical gntK gene (also known as gntK2). Both gluconate kinases encoded by these genes belong to this family, however the protein encoded by C. glutamicum gntV is not included in this model as it is truncated in the C-terminal domain.	0
NZ_JNGJ01000024.1\|WP_003722062.1\|107043_107640_-\|recombination-protein-RecR	gnl\|CDD\|234616	PRK00076, recR, recombination protein RecR; Reviewed.	7.77001e-132
NZ_JNGJ01000024.1\|WP_003722074.1\|117128_118076_-\|LPXTG-cell-wall-anchor-domain-containing-protein	gnl\|CDD\|273478	TIGR01167, Zinc_metalloprotease_ZmpB, LPXTG-motif cell wall anchor domain. This model describes the LPXTG motif-containing region found at the C-terminus of many surface proteins of Streptococcus and Streptomyces species. Cleavage between the Thr and Gly by sortase or a related enzyme leads to covalent anchoring at the new C-terminal Thr to the cell wall. Hits that do not lie at the C-terminus or are not found in Gram-positive bacteria are probably false-positive. A common feature of this proteins containing this domain appears to be a high proportion of charged and zwitterionic residues immediatedly upstream of the LPXTG motif. This model differs from other descriptions of the LPXTG region by including a portion of that upstream charged region. [Cell envelope, Other].	1.13667e-05
NZ_JNGJ01000024.1\|WP_003722058.1\|103965_104817_+\|MurR/RpiR-family-transcriptional-regulator	gnl\|CDD\|224651	COG1737, RpiR, Transcriptional regulators [Transcription].	1.27215e-62
NZ_JNGJ01000024.1\|WP_014601199.1\|108095_109835_-\|DNA-polymerase-III-subunit-gamma/tau	gnl\|CDD\|235505	PRK05563, PRK05563, DNA polymerase III subunits gamma and tau; Validated.	0
NZ_JNGJ01000024.1\|WP_014601196.1\|103485_103860_+\|PTS-dependent-dihydroxyacetone-kinase-phosphotransferase-subunit-DhaM	gnl\|CDD\|184702	PRK14484, PRK14484, phosphotransferase mannnose-specific family component IIA; Provisional.	7.24481e-50
NZ_JNGJ01000024.1\|WP_003725004.1\|111184_112549_-\|PTS-sugar-transporter-subunit-IIC	gnl\|CDD\|224372	COG1455, CelB, Phosphotransferase system cellobiose-specific component IIC [Carbohydrate transport and metabolism].	3.47828e-162
NZ_JNGJ01000024.1\|WP_003727657.1\|110643_110826_-\|DUF3188-domain-containing-protein	gnl\|CDD\|371501	pfam11384, DUF3188, Protein of unknown function (DUF3188). This bacterial family of proteins has no known function.	1.21027e-11
NZ_JNGJ01000024.1\|WP_003722061.1\|106783_107029_-\|YaaL-family-protein	gnl\|CDD\|378478	pfam10704, DUF2508, Protein of unknown function (DUF2508). This family is conserved in Firmicutes. Several members are annotated as being the protein YaaL. The function is not known.	2.68189e-15
NZ_JNGJ01000024.1\|WP_003722063.1\|107748_108066_-\|YbaB/EbfC-family-nucleoid-associated-protein	gnl\|CDD\|234669	PRK00153, PRK00153, YbaB/EbfC family nucleoid-associated protein.	3.53269e-41
NZ_JNGJ01000024.1\|WP_012951102.1\|102885_103482_+\|dihydroxyacetone-kinase-subunit-L	gnl\|CDD\|274099	TIGR02365, dha_L_ycgS, dihydroxyacetone kinase, phosphoprotein-dependent, L subunit. Two types of dihydroxyacetone kinase (glycerone kinase) are described. In yeast and a few bacteria, e.g. Citrobacter freundii, the enzyme is a single chain that uses ATP as phosphoryl donor and is designated EC 2.7.1.29. By contract, E. coli and many other bacterial species have a multisubunit form (EC 2.7.1.-) with a phosphoprotein donor related to PTS transport proteins. This family represents the subunit homologous to the E. coli YcgS subunit.	1.69543e-82

>NZ_JNGJ01000024.1|WP_014601199.1|108095_109835_-|DNA-polymerase-III-subunit-gamma/tau
MAYQALYRVFRPQSFQDVVGQEHVTKTLKNAIVQNKTSHAYLFSGPRGTGKTSAAKIFAKAINCEHGHDGEPCNECEICKGTTDGSIPDVLEIDAASNNGVEEIRDIREKVKYAPTVAKYKVYIIDEVHMLSTGAFNALLKTLEEPPKHVIFILATTEPHKLPLTIISRVQRFDFKRITTQDIIGRLKFILEEEKIPYDEKALMIVARAAEGGMRDALSLLDQVISYGSEEVTVEDALEITGSVAQNLLTKLVSAAFDGDAAEAISTLTALLAEGKDPVRLVEDLLVFFRDVLLYQKAPNLEETLERALIDDDFVALAKRADSLKVYEFVKILNTAQQQMRFSNHPGIYVEVALVQLTQAGQSVAGGGNVPADAASGSDVSDLKRQMEQMHQEIQTLKKQIASGAGAAPADKPTQNRGGSKKAINNGKQFKAPIGKINHVLGEAKKENLQLIRGCWGELLSMLMASQAALLNDAEPVAASQDTFVLKFKHEIHCQMAMDNPNFVETITSSIARLTQVNYTFIGIPEDQWADVRENFLHSHGSDADAEDGANPEAKKPAEDPFVAEAAKLVGEDLLEIKD
>NZ_JNGJ01000024.1|WP_003722063.1|107748_108066_-|YbaB/EbfC-family-nucleoid-associated-protein
MRGMGNMQGMMKQMQKMQKEMAKAQADLEAQEFTGTAGGGMVTVKATGKRVITDVVINEEVVDPEDIEMLQDLVLAATNDVLKQIEDTTSQTMGKFTQGLNIPGM
>NZ_JNGJ01000024.1|WP_003722062.1|107043_107640_-|recombination-protein-RecR
MHYPEPITKLIDSFMKLPGIGPKSAARLAFYVLDMKEDDVLDFAKALVDAKRNLSFCSVCGHITDKDPCYICADTSRDRSVICVVQESKDVIAMEKMRDFHGLYHVLHGTISPMDGIGPEDINIPDLLKRLQDDTIEEVILATNPNVEGEATAMYISRLLKPSGIKVTRIAHGLPVGGDLEYADEVTLSKAMEGRREV
>NZ_JNGJ01000024.1|WP_003722061.1|106783_107029_-|YaaL-family-protein
MESRSNKFGRKKNKKIGKLHKSYDAYLMELIEVTQENWHKQKVLMRKSFEYDPNLEYEEKKAEARYFYLFKEARTRQLKNK
>NZ_JNGJ01000024.1|WP_014601198.1|105895_106738_+|aldo/keto-reductase
MTLSFSDTYRLNNGIEMPRHGFGVYKLTDEARMRTALETAVDVGYRLFDTASFYHNEKELGDFFASSGLKRDEFFVTTKMWNTEQGYDETLRAFEKSQKKLQLDQIDLYLVHWPKQNTFFDTWRAVEKLYDEGLVRAIGVSNFEAHHLDRLRTSANVLPVVDQLETHPHFPNHLLHRYLEELHIVHQAWSPLGRGGVLQEQILIDLAEKHGKSPAQIVLRWHLQNNISIIPKSETPSRIRENAAIYDFELSEADMRQVERLNTGERVSHAPDVMYVRSEI
>NZ_JNGJ01000024.1|WP_014601197.1|104935_105775_+|Cof-type-HAD-IIB-family-hydrolase
MTTQAIILDIDGTLLNDDKKISPETKKALITAQENGVKLILASGRPTTGMHAYAEQLEMEKHHGLLVSYNGAKVVDCARSEELFNQALTVEEGKAVLEHMKQFKVKVMIDKEDYMYTNDVYDCYVPYRGEEINIIQYESRGGNFKLCEKDDLAAFLDYRLSKILTAGDPAYMQKNYQAMMAPFKDTLNCVFTADFYFEFTAQGIDKAKALDTVLTPMGIHAENIIAFGDGHNDITMVEYAGTGIAMQNAVAELKAAASSVTLSNNEDGIAHVLNSLIPS
>NZ_JNGJ01000024.1|WP_003722058.1|103965_104817_+|MurR/RpiR-family-transcriptional-regulator
MNILIKIRELTNLTNSEKELANYILANPKKTLQFKPKELAAAAFVSAATIYRLINKLGLNGIGELKIEIASSLRETNAEKDINYDYPILESDTPYQIMTNLNQIYKGTIDETLNNADPEELVKIGEKLINAKTIDVYAASANLFFAQNFKFQMQEIGVLVNVPEEDYIQSLSAANSDENHIAIVVSYGGRSRTLQRVVKILSENNVDIILITSMQDNPLVEFATHKIYMASAENHYNKVSSFSTRQSLLSIFDTLYSIYFNQNYEKNIQYKTTNYQKMNTELE
>NZ_JNGJ01000024.1|WP_014601196.1|103485_103860_+|PTS-dependent-dihydroxyacetone-kinase-phosphotransferase-subunit-DhaM
MTKPYGVVIVSHSKDVAKGVHDIIKEIAPDVSITHAGGTEDGRIGTSFDAVNEAIESNEADKVYTFYDLGSAKMNIETVEEISEKEIILFNAPILEGAYATAAQVQMDEKPEVIAANLKTIEIK
>NZ_JNGJ01000024.1|WP_012951102.1|102885_103482_+|dihydroxyacetone-kinase-subunit-L
MTYDKDWALRWLNDFGERVQENKQLLSDLDQAIGDGDHGINMARGLSELKKVFTEKEPADLKDVFKTAGMTMVSKVGGASGPLYGTAFLNMSKAVDADTIDAVGLTKVIEAGLEGIEKRGKSHAGEKTMIDVWEPVVHALHQEDLTDDVVDAALQKTKDLKATKGRASYLGERSIGHLDPGAYSSALLFHAMLQTEVS
>NZ_JNGJ01000024.1|WP_003732079.1|101874_102864_+|dihydroxyacetone-kinase-subunit-DhaK
MKKILNGTDQVVEQMVEGLVKSHADVVHRVEGTRVIARNDKRPGKVGLVSGGGSGHEPAHAGYVGRGMLSAAVCGDVFTSPTPDQIYEGIKAADQGAGVLLIVKNYTGDVMNFEMAADLADADDIKVEQIVVDDDIAVEDSTFTTGRRGVAGTVLVHKIIGAAAEAGASLDELKALGEKVIASVKTLGVALSPCTVPEVGHPGFELGDDEIELGIGIHGEPGFTREKIMPSASLAKQLYERISNESKLLAGDKVVVLVNGMGATPLMEQYVFANDVHELLKNAGVQVAKTLVGDYMTSLEMAGLSLTILKLEDEKWVDMLKLPVDTIAW
>NZ_JNGJ01000024.1|WP_003722065.1|110161_110626_-|DUF3284-domain-containing-protein
MNVTQKLYISQKECFDTLVSSAIYDVKNATGKTLQVRKLEGYKYQRTMSNGALATTKIVKVQPNELYQFETSSRVNTHTTTYTIKSTSETTCEVTYNELIETEKALNKMNNIIVGFMFGFFRKKRVKNLLKSIELSVINESKQKQEKLAAKSEQ
>NZ_JNGJ01000024.1|WP_003727657.1|110643_110826_-|DUF3188-domain-containing-protein
MKIVNALFLISIGLIIIMFSPSYGKDGMASVPLLVTGLAVVLIGCVFIVLKIRKDKKEKN
>NZ_JNGJ01000024.1|WP_003722067.1|110828_111050_-|hypothetical-protein
MIILNCPMKRDYITELLETYDKDGVTFKKIDEKGMKLTFETNIEDEEKAAKIAKETIKATEIGSVLYFQVSVG
>NZ_JNGJ01000024.1|WP_003725004.1|111184_112549_-|PTS-sugar-transporter-subunit-IIC
MNGLTAFLEKYFVPVAAKIGSQKHLVALRDAFISTMPITMAGSIAVLLNAFFRDFPTDWGWTGFVEAMQPLIGINGYVYNGTLAIVSIIFAFSLGYNLSKAYEVDRLAGGLVSLAAFVMNLTVTVSLDAVKAAIAASNANFDVATLPKEFAGIYGFFSLSQVNGTGLFTAMIFGFISTIIYAKLMRRNIIIKMPDSVPPAVSKAFAAIIPALVALYVVGIIDWAFFKITNMDVITWISKTIQEPLLSLSQGYGAVLLVTFLVQLLWFFGIHGPNVLAPVLESLWGTAQLQNISAAQEGAKLPFEWVRGSFDAYVWMGGSGGTLVLIIALLMFSKRADARTVAKLSLAPGIFNINEPIMFGLPIVLNTIYLIPFLIAPMVMVTIAYFATTLGIVGPVKIAVVWVMPPLLNSFLATGGDWMAPVISLINMVVAFLIWVPFVITANRVGVPEEEMKA
>NZ_JNGJ01000024.1|WP_003722069.1|112991_113147_+|hypothetical-protein
MAVKRDMPEESKNSKVVKKEHFSIVFPDDIKEPKNASEQKKQDVEKKTDDN
>NZ_JNGJ01000024.1|WP_003722070.1|113179_113821_-|hypothetical-protein
MQQLKSKKKWLPALIVAVFVGIIVILAIMFGFFQRQEVFDKYEVAYEIDGKLYEVFPISATDIGVDKKSKDKNLYFRVNSYYNIDYLFRLAYKQYEINEPSTNKYYSGLIDYSVADNAYVTQKDVYITNNESYATYDFFDKNGKKIYSYNPEETSNDDYIVRIKPTILQGYEKSDIGSYDDYLNITALFKDKLGMDVNVRIDEDKEMVIFSIK
>NZ_JNGJ01000024.1|WP_014931034.1|114518_116033_-|gluconokinase
MTSKPYIMGVDIGTSSTKAVLFNQRGEVIFRQATHYELITDETGKAEESPTEIFDAVLTSIQAVMKNINTEELAGISFSSAMHSLIMVGSNGELLTECITWADGRSSETLEKVKRDNYLFQLYEATGTPIHPMSPFAKICWLKEEKPTLFKRTEKFVDIKSYILYRLFGVWVMDESLASGTGLYNIMEHDWEFEAMEIVKLTPDFLPKVVPETYQLAGVKKEYAELMGIPENLPFIIGGSDGALANIGIQATGQNDVTITVGTSGAVRKLTDQFQIDSRGRTFCYGAGDGYFIAGGAVNNGGKVVEWGLQQFGSEAEISRRDFASFIAKIEEVPPGAAGLLFQPYLLGERAPFWTNDIRGGFVGLTINHTKAHFIRAILEGVAFNLAEVYEVVSAPDDIIYVTGGISAHDAWCKLLADILNREIRVPHTIEGSSLGAAIIGMRSLGILKDLNLKHTMPIKAVYHPSENVLKYAELRLIFKQVTTQLMSSYSQLNSWQKKFDINS
>NZ_JNGJ01000024.1|WP_003732088.1|116147_117086_-|GW-domain-containing-glycosaminoglycan-binding-protein
MKKLLSGLIVVLMVSLLGHSFNAEAASYEKIIYDKAVNLKGVVNQSKRNDGINSKMYKTSSSVKYLGSAKKYDKKTLIITREGKTARAKWYYCKLGNTTIGWIDSRAFTNIGKPTIADAVPALWNSKKAIITTKPKSTTATTYFFQKNSAGNWYEVRHFTSHIGKWGFDPKFSEKSSGTPVGVYRTGIAFGQKGNPGTKLTFRAITNRSYWISNSNDKAYNTWQERNSSSSADEKMKIPQYKYGMEVKYNAKRVKGKGSAVFYHVDSPKYNYTLGCVAQSEANTKEVLKFADKNTLIVLGEESRIKTFYGIN
>NZ_JNGJ01000024.1|WP_003722074.1|117128_118076_-|LPXTG-cell-wall-anchor-domain-containing-protein
MKKFHGLILTALVTCLIIPFSLAASAETNENGNNSTPTEEKTTDTTENIITEEKTEPAEPTKDTTVTPPQKSKVQTTIDITDSQEVYSYEQNSKIDLKDFTATLTDYTDTKLTNYRLAANSKLSTAQTGIQEVTLLGDNEDGKTTAVKLNYLVKEKTAQLTITDMNFDLETKIFTGKTKPFASVYMSSPADENFGEGTTTADKDGYFYAEWATTPKQITAYAFDESGNYSEEVTYQVPAKKQNEAVVTAPDKVKKIETKNAVKSATTKPTDVTKVTKDDKTDLPSTGDKGTEWIFVVAGVIVILVAVLLLRKRKK
>NZ_JNGJ01000024.1|WP_003732089.1|118216_119956_-|thiol-reductant-ABC-exporter-subunit-CydC
MRKSSWIIPYIKENRGLFLLVIFLGTLTFASAGALMFTSGHLISKSSLMPESIMAVYISTVGVRAFGIMRSVSRYVERLSSHSLVLRILEKMRVRLYRLLEPQALLLKSRYKTGDILGLLAGDIEHLQNFYLTTMLPAIVSLVLYAGVVIALGAFSIPFAALFVLLIGLLVLVLPWVSLLYARGKNAYLKQGRNSLYQKFTDAVFGISDWKFSGREKTFISNYEKDEADMLRTENKQFHFVNWRDFFSQLVVGFMVIVMVYWSTAESRDGAFSGTMIAAFVLAIMALAEAFVPVSSAISDKSLYQDSLARLDKIEDPALPTFEEETKEIERINTENVVLKAENLTFAYDEKSPEILNGFDFTLQQGEKVAIIGRSGTGKSTFLKLVQGALLPTAGKVTMNDVEVEKLRPQIPELTSMLNQKAHLFSTTVLNNIRLGNQDASDEEVYEAAKKVQLHDFIMSMPDGYHTQMSEMGERFSGGERGRIALARILLQNTPIVILDEPTVGLDPITERDLLATIFETLADKSLIWVTHHLVGAEKMDRVLFLEEGKTLMEGPHAELMAEEPRYKRLYQLDRPIEL

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Identity
NZ_JNGJ01000024_1	1.4\|5452\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	5452-5481	30	NZ_JNGJ01000028.1	21120-21149	1.0
NZ_JNGJ01000024_1	1.6\|5584\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	5584-5613	30	NZ_JNGJ01000011.1	303061-303090	1.0
NZ_JNGJ01000024_1	1.31\|7236\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7236-7265	30	NZ_JNGJ01000028.1	14297-14326	1.0
NZ_JNGJ01000024_1	1.35\|7236\|29\|NZ_JNGJ01000024\|PILER-CR	7236-7264	29	NZ_JNGJ01000028.1	14298-14326	1.0

1. spacer 1.4|5452|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to position: 21120-21149, mismatch: 0, identity: 1.0

aacaagaaaaaagatccagacaatattgca	CRISPR spacer
aacaagaaaaaagatccagacaatattgca	Protospacer
******************************

2. spacer 1.6|5584|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to position: 303061-303090, mismatch: 0, identity: 1.0

taagcgtaatattaatgtcaaagcttctag	CRISPR spacer
taagcgtaatattaatgtcaaagcttctag	Protospacer
******************************

3. spacer 1.31|7236|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to position: 14297-14326, mismatch: 0, identity: 1.0

tcaaaagcgcgcatgaggaagaaatcacga	CRISPR spacer
tcaaaagcgcgcatgaggaagaaatcacga	Protospacer
******************************

4. spacer 1.35|7236|29|NZ_JNGJ01000024|PILER-CR matches to position: 14298-14326, mismatch: 0, identity: 1.0

tcaaaagcgcgcatgaggaagaaatcacg	CRISPR spacer
tcaaaagcgcgcatgaggaagaaatcacg	Protospacer
*****************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_JNGJ01000024_1	1.2\|5320\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	5320-5349	30	DQ003637	Listeria phage A500, complete genome	30242-30271	0	1.0
NZ_JNGJ01000024_1	1.6\|5584\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	5584-5613	30	NZ_LR134403	Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence	222544-222573	0	1.0
NZ_JNGJ01000024_1	1.6\|5584\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	5584-5613	30	KJ094023	Listeria phage LP-101, complete genome	13017-13046	0	1.0
NZ_JNGJ01000024_1	1.14\|6113\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT,PILER-CR	6113-6142	30	NC_009813	Listeria phage B054, complete genome	2110-2139	0	1.0
NZ_JNGJ01000024_1	1.15\|6179\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT,PILER-CR	6179-6208	30	KP399678	Listeria phage vB_LmoS_293, complete genome	38838-38867	0	1.0
NZ_JNGJ01000024_1	1.23\|6707\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT,PILER-CR	6707-6736	30	KJ094022	Listeria phage LP-030-3, complete genome	18116-18145	0	1.0
NZ_JNGJ01000024_1	1.25\|6839\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT,PILER-CR	6839-6868	30	MH299806	Listeria phage LP-KV022, complete genome	20588-20617	0	1.0
NZ_JNGJ01000024_1	1.25\|6839\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT,PILER-CR	6839-6868	30	JB137888	Sequence 7 from Patent WO2012159774	33043-33072	0	1.0
NZ_JNGJ01000024_1	1.25\|6839\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT,PILER-CR	6839-6868	30	KJ094025	Listeria phage LP-032 contig 2, partial genome	22432-22461	0	1.0
NZ_JNGJ01000024_1	1.25\|6839\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT,PILER-CR	6839-6868	30	MN114083	Listeria phage LP-013, complete genome	15094-15123	0	1.0
NZ_JNGJ01000024_1	1.25\|6839\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT,PILER-CR	6839-6868	30	NC_021785	Listeria phage LP-110, complete genome	43434-43463	0	1.0
NZ_JNGJ01000024_1	1.25\|6839\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT,PILER-CR	6839-6868	30	MN128593	Listeria phage LP-031, complete genome	15073-15102	0	1.0
NZ_JNGJ01000024_1	1.25\|6839\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT,PILER-CR	6839-6868	30	MN904502	Listeria phage LP-018, complete genome	15094-15123	0	1.0
NZ_JNGJ01000024_1	1.25\|6839\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT,PILER-CR	6839-6868	30	JX442241	Listeria phage P70, complete genome	20591-20620	0	1.0
NZ_JNGJ01000024_1	1.25\|6839\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT,PILER-CR	6839-6868	30	KJ094020	Listeria phage LP-026, complete genome	64637-64666	0	1.0
NZ_JNGJ01000024_1	1.25\|6839\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT,PILER-CR	6839-6868	30	MN114082	Listeria phage LP-010, complete genome	15095-15124	0	1.0
NZ_JNGJ01000024_1	1.27\|6971\|31\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT,PILER-CR	6971-7001	31	KJ094023	Listeria phage LP-101, complete genome	2451-2481	0	1.0
NZ_JNGJ01000024_1	1.29\|7104\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7104-7133	30	MT500540	Listeria phage LP-HM00113468, complete genome	36945-36974	0	1.0
NZ_JNGJ01000024_1	1.29\|7104\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7104-7133	30	NC_009812	Listeria phage B025, complete genome	7937-7966	0	1.0
NZ_JNGJ01000024_1	1.30\|7170\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7170-7199	30	MH341452	Listeria phage PSU-VKH-LP040, complete genome	37120-37149	0	1.0
NZ_JNGJ01000024_1	1.30\|7170\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7170-7199	30	DQ003637	Listeria phage A500, complete genome	36223-36252	0	1.0
NZ_JNGJ01000024_1	1.30\|7170\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7170-7199	30	KP399677	Listeria phage vB_LmoS_188, complete genome	36255-36284	0	1.0
NZ_JNGJ01000024_1	1.30\|7170\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7170-7199	30	KJ094022	Listeria phage LP-030-3, complete genome	5778-5807	0	1.0
NZ_JNGJ01000024_1	1.30\|7170\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7170-7199	30	KP399678	Listeria phage vB_LmoS_293, complete genome	38539-38568	0	1.0
NZ_JNGJ01000024_1	1.31\|7236\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7236-7265	30	MH341451	Listeria phage PSU-VKH-LP019, complete genome	4931-4960	0	1.0
NZ_JNGJ01000024_1	1.31\|7236\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7236-7265	30	KP399677	Listeria phage vB_LmoS_188, complete genome	4940-4969	0	1.0
NZ_JNGJ01000024_1	1.31\|7236\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7236-7265	30	DQ003642	Listeria phage A006, complete genome	4940-4969	0	1.0
NZ_JNGJ01000024_1	1.33\|7104\|29\|NZ_JNGJ01000024\|PILER-CR	7104-7132	29	MT500540	Listeria phage LP-HM00113468, complete genome	36945-36973	0	1.0
NZ_JNGJ01000024_1	1.33\|7104\|29\|NZ_JNGJ01000024\|PILER-CR	7104-7132	29	NC_009812	Listeria phage B025, complete genome	7938-7966	0	1.0
NZ_JNGJ01000024_1	1.34\|7170\|29\|NZ_JNGJ01000024\|PILER-CR	7170-7198	29	MH341452	Listeria phage PSU-VKH-LP040, complete genome	37121-37149	0	1.0
NZ_JNGJ01000024_1	1.34\|7170\|29\|NZ_JNGJ01000024\|PILER-CR	7170-7198	29	DQ003637	Listeria phage A500, complete genome	36224-36252	0	1.0
NZ_JNGJ01000024_1	1.34\|7170\|29\|NZ_JNGJ01000024\|PILER-CR	7170-7198	29	KP399677	Listeria phage vB_LmoS_188, complete genome	36256-36284	0	1.0
NZ_JNGJ01000024_1	1.34\|7170\|29\|NZ_JNGJ01000024\|PILER-CR	7170-7198	29	KJ094022	Listeria phage LP-030-3, complete genome	5779-5807	0	1.0
NZ_JNGJ01000024_1	1.34\|7170\|29\|NZ_JNGJ01000024\|PILER-CR	7170-7198	29	KP399678	Listeria phage vB_LmoS_293, complete genome	38540-38568	0	1.0
NZ_JNGJ01000024_1	1.35\|7236\|29\|NZ_JNGJ01000024\|PILER-CR	7236-7264	29	MH341451	Listeria phage PSU-VKH-LP019, complete genome	4931-4959	0	1.0
NZ_JNGJ01000024_1	1.35\|7236\|29\|NZ_JNGJ01000024\|PILER-CR	7236-7264	29	KP399677	Listeria phage vB_LmoS_188, complete genome	4940-4968	0	1.0
NZ_JNGJ01000024_1	1.35\|7236\|29\|NZ_JNGJ01000024\|PILER-CR	7236-7264	29	DQ003642	Listeria phage A006, complete genome	4940-4968	0	1.0
NZ_JNGJ01000024_1	1.2\|5320\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	5320-5349	30	KJ094022	Listeria phage LP-030-3, complete genome	39811-39840	1	0.967
NZ_JNGJ01000024_1	1.3\|5386\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	5386-5415	30	MT668624	Listeria phage LP-Mix_6.2, complete genome	128892-128921	1	0.967
NZ_JNGJ01000024_1	1.3\|5386\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	5386-5415	30	MT178766	Listeria virus P100plus, complete genome	93908-93937	1	0.967
NZ_JNGJ01000024_1	1.3\|5386\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	5386-5415	30	NC_047872	Listeria phage LMTA-94, complete genome	5469-5498	1	0.967
NZ_JNGJ01000024_1	1.3\|5386\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	5386-5415	30	MT178767	Listeria virus P200, complete genome	93909-93938	1	0.967
NZ_JNGJ01000024_1	1.3\|5386\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	5386-5415	30	DQ004855	Listeria bacteriophage P100, complete genome	93901-93930	1	0.967
NZ_JNGJ01000024_1	1.3\|5386\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	5386-5415	30	KJ591605	Listeria phage LMTA-57, complete genome	15850-15879	1	0.967
NZ_JNGJ01000024_1	1.3\|5386\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	5386-5415	30	MN128594	Listeria phage LP-066, complete genome	128411-128440	1	0.967
NZ_JNGJ01000024_1	1.3\|5386\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	5386-5415	30	NC_042048	Listeria phage LMTA-34, complete genome	5592-5621	1	0.967
NZ_JNGJ01000024_1	1.3\|5386\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	5386-5415	30	KJ668717	Listeria phage LMTA-34 hypothetical proteins, transposase domain-containing protein, and hypothetical proteins genes, complete cds	913-942	1	0.967
NZ_JNGJ01000024_1	1.3\|5386\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	5386-5415	30	NC_041862	Listeria phage LP-064, complete genome	1706-1735	1	0.967
NZ_JNGJ01000024_1	1.3\|5386\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	5386-5415	30	KJ094030	Listeria phage LP-083-2, complete genome	133572-133601	1	0.967
NZ_JNGJ01000024_1	1.3\|5386\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	5386-5415	30	JX126918	Listeria phage LP-125, complete genome	1706-1735	1	0.967
NZ_JNGJ01000024_1	1.3\|5386\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	5386-5415	30	NC_024360	Listeria phage LMSP-25, complete genome	5592-5621	1	0.967
NZ_JNGJ01000024_1	1.3\|5386\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	5386-5415	30	KJ535721	Listeria phage List-36, complete genome	227-256	1	0.967
NZ_JNGJ01000024_1	1.3\|5386\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	5386-5415	30	KJ094031	Listeria phage LP-124, complete genome	95687-95716	1	0.967
NZ_JNGJ01000024_1	1.4\|5452\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	5452-5481	30	NC_003216	Listeria phage A118, complete genome	38773-38802	1	0.967
NZ_JNGJ01000024_1	1.4\|5452\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	5452-5481	30	AJ242593	Bacteriophage A118 complete genome	38773-38802	1	0.967
NZ_JNGJ01000024_1	1.4\|5452\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	5452-5481	30	DQ003642	Listeria phage A006, complete genome	36068-36097	1	0.967
NZ_JNGJ01000024_1	1.5\|5518\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	5518-5547	30	KJ094023	Listeria phage LP-101, complete genome	33655-33684	1	0.967
NZ_JNGJ01000024_1	1.6\|5584\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	5584-5613	30	MT500540	Listeria phage LP-HM00113468, complete genome	31908-31937	1	0.967
NZ_JNGJ01000024_1	1.14\|6113\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT,PILER-CR	6113-6142	30	MH341453	Listeria phage PSU-VKH-LP041, complete genome	2110-2139	1	0.967
NZ_JNGJ01000024_1	1.24\|6773\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT,PILER-CR	6773-6802	30	MH299806	Listeria phage LP-KV022, complete genome	51683-51712	1	0.967
NZ_JNGJ01000024_1	1.24\|6773\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT,PILER-CR	6773-6802	30	MN114083	Listeria phage LP-013, complete genome	47204-47233	1	0.967
NZ_JNGJ01000024_1	1.24\|6773\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT,PILER-CR	6773-6802	30	NC_021785	Listeria phage LP-110, complete genome	9401-9430	1	0.967
NZ_JNGJ01000024_1	1.24\|6773\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT,PILER-CR	6773-6802	30	KJ094026	Listeria phage LP-032 contig 3, partial genome	11155-11184	1	0.967
NZ_JNGJ01000024_1	1.24\|6773\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT,PILER-CR	6773-6802	30	MN128593	Listeria phage LP-031, complete genome	46499-46528	1	0.967
NZ_JNGJ01000024_1	1.24\|6773\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT,PILER-CR	6773-6802	30	NC_021787	Listeria phage LP-037, complete genome	3866-3895	1	0.967
NZ_JNGJ01000024_1	1.24\|6773\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT,PILER-CR	6773-6802	30	MN904502	Listeria phage LP-018, complete genome	46656-46685	1	0.967
NZ_JNGJ01000024_1	1.24\|6773\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT,PILER-CR	6773-6802	30	JX442241	Listeria phage P70, complete genome	53116-53145	1	0.967
NZ_JNGJ01000024_1	1.24\|6773\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT,PILER-CR	6773-6802	30	KJ094020	Listeria phage LP-026, complete genome	30018-30047	1	0.967
NZ_JNGJ01000024_1	1.24\|6773\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT,PILER-CR	6773-6802	30	KJ094021	Listeria phage LP-114, complete genome	37209-37238	1	0.967
NZ_JNGJ01000024_1	1.24\|6773\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT,PILER-CR	6773-6802	30	MN114082	Listeria phage LP-010, complete genome	46489-46518	1	0.967
NZ_JNGJ01000024_1	1.27\|6971\|31\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT,PILER-CR	6971-7001	31	NC_009812	Listeria phage B025, complete genome	2459-2489	1	0.968
NZ_JNGJ01000024_1	1.28\|7038\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7038-7067	30	NZ_LR134403	Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence	218230-218259	1	0.967
NZ_JNGJ01000024_1	1.28\|7038\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7038-7067	30	MT500540	Listeria phage LP-HM00113468, complete genome	36219-36248	1	0.967
NZ_JNGJ01000024_1	1.28\|7038\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7038-7067	30	KJ094023	Listeria phage LP-101, complete genome	8703-8732	1	0.967
NZ_JNGJ01000024_1	1.29\|7104\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7104-7133	30	NZ_LR134403	Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence	217503-217532	1	0.967
NZ_JNGJ01000024_1	1.29\|7104\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7104-7133	30	KJ094023	Listeria phage LP-101, complete genome	7976-8005	1	0.967
NZ_JNGJ01000024_1	1.33\|7104\|29\|NZ_JNGJ01000024\|PILER-CR	7104-7132	29	NZ_LR134403	Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence	217504-217532	1	0.966
NZ_JNGJ01000024_1	1.33\|7104\|29\|NZ_JNGJ01000024\|PILER-CR	7104-7132	29	KJ094023	Listeria phage LP-101, complete genome	7977-8005	1	0.966
NZ_JNGJ01000024_1	1.1\|5254\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	5254-5283	30	DQ003637	Listeria phage A500, complete genome	37232-37261	2	0.933
NZ_JNGJ01000024_1	1.1\|5254\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	5254-5283	30	KJ094022	Listeria phage LP-030-3, complete genome	6787-6816	2	0.933
NZ_JNGJ01000024_1	1.4\|5452\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	5452-5481	30	MH341451	Listeria phage PSU-VKH-LP019, complete genome	36962-36991	2	0.933
NZ_JNGJ01000024_1	1.16\|6245\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT,PILER-CR	6245-6274	30	KJ094023	Listeria phage LP-101, complete genome	18962-18991	2	0.933
NZ_JNGJ01000024_1	1.24\|6773\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT,PILER-CR	6773-6802	30	JB137888	Sequence 7 from Patent WO2012159774	1635-1664	2	0.933
NZ_JNGJ01000024_1	1.27\|6971\|31\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT,PILER-CR	6971-7001	31	NZ_LR134403	Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence	211978-212008	2	0.935
NZ_JNGJ01000024_1	1.26\|6905\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT,PILER-CR	6905-6934	30	KJ094027	Listeria phage LP-083-1 contig 1, partial genome	830-859	3	0.9
NZ_JNGJ01000024_1	1.26\|6905\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT,PILER-CR	6905-6934	30	DQ003641	Listeria phage P35, complete genome	583-612	3	0.9
NZ_JNGJ01000024_1	1.28\|7038\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7038-7067	30	MH319731	Marine virus AG-345-E02 Ga0172268_11 genomic sequence	31346-31375	5	0.833
NZ_JNGJ01000024_1	1.28\|7038\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7038-7067	30	HQ632825	Prochlorococcus phage P-SSM5 genomic sequence	237944-237973	5	0.833
NZ_JNGJ01000024_1	1.28\|7038\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7038-7067	30	AY939844	Prochlorococcus phage P-SSM2, complete genome	101085-101114	5	0.833
NZ_JNGJ01000024_1	1.3\|5386\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	5386-5415	30	NC_018265	Melissococcus plutonius DAT561 plasmid 1, complete sequence	5373-5402	6	0.8
NZ_JNGJ01000024_1	1.3\|5386\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	5386-5415	30	NZ_CP006684	Melissococcus plutonius S1 plasmid pMEPL_178, complete sequence	172436-172465	6	0.8
NZ_JNGJ01000024_1	1.3\|5386\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	5386-5415	30	NZ_AP021886	Melissococcus plutonius strain DAT1033 plasmid pMP1, complete sequence	172441-172470	6	0.8
NZ_JNGJ01000024_1	1.3\|5386\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	5386-5415	30	NZ_AP018525	Melissococcus plutonius strain DAT585 plasmid pMP1, complete sequence	172264-172293	6	0.8
NZ_JNGJ01000024_1	1.5\|5518\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	5518-5547	30	NC_025830	Escherichia phage Av-05, complete genome	22529-22558	6	0.8
NZ_JNGJ01000024_1	1.6\|5584\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	5584-5613	30	NZ_CP044539	Borrelia sp. CA690 plasmid cp26, complete sequence	11037-11066	6	0.8
NZ_JNGJ01000024_1	1.7\|5650\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	5650-5679	30	NZ_CP024448	Moraxella osloensis strain NP7 plasmid pNP7-5, complete sequence	45414-45443	6	0.8
NZ_JNGJ01000024_1	1.10\|5848\|31\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	5848-5878	31	MW057856	Providencia phage PSTCR4, complete genome	27578-27608	6	0.806
NZ_JNGJ01000024_1	1.12\|5981\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT,PILER-CR	5981-6010	30	MF351863	Synechococcus phage Bellamy, complete genome	141517-141546	6	0.8
NZ_JNGJ01000024_1	1.28\|7038\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7038-7067	30	MN694096	Marine virus AFVG_250M214, complete genome	34457-34486	6	0.8
NZ_JNGJ01000024_1	1.28\|7038\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7038-7067	30	MN694078	Marine virus AFVG_250M213, complete genome	4053-4082	6	0.8
NZ_JNGJ01000024_1	1.28\|7038\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7038-7067	30	MN693931	Marine virus AFVG_250M215, complete genome	4055-4084	6	0.8
NZ_JNGJ01000024_1	1.28\|7038\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7038-7067	30	NC_029057	Vibrio phage qdvp001, partial genome	61001-61030	6	0.8
NZ_JNGJ01000024_1	1.30\|7170\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7170-7199	30	NC_014660	Acinetobacter phage Ac42, complete genome	66892-66921	6	0.8
NZ_JNGJ01000024_1	1.34\|7170\|29\|NZ_JNGJ01000024\|PILER-CR	7170-7198	29	NZ_CP025427	Enterococcus faecium strain SC4 plasmid p2, complete sequence	34476-34504	6	0.793
NZ_JNGJ01000024_1	1.34\|7170\|29\|NZ_JNGJ01000024\|PILER-CR	7170-7198	29	NZ_CP041263	Enterococcus faecium strain VVEswe-R plasmid pVVEswe-R2	64871-64899	6	0.793
NZ_JNGJ01000024_1	1.34\|7170\|29\|NZ_JNGJ01000024\|PILER-CR	7170-7198	29	NZ_CP027511	Enterococcus faecium strain AUSMDU00004055 plasmid unnamed5, complete sequence	32646-32674	6	0.793
NZ_JNGJ01000024_1	1.34\|7170\|29\|NZ_JNGJ01000024\|PILER-CR	7170-7198	29	NZ_LR135332	Enterococcus faecium isolate E7471 plasmid 2	55763-55791	6	0.793
NZ_JNGJ01000024_1	1.34\|7170\|29\|NZ_JNGJ01000024\|PILER-CR	7170-7198	29	NZ_LR135332	Enterococcus faecium isolate E7471 plasmid 2	106758-106786	6	0.793
NZ_JNGJ01000024_1	1.34\|7170\|29\|NZ_JNGJ01000024\|PILER-CR	7170-7198	29	NZ_LR135245	Enterococcus faecium isolate E6988 plasmid 3	65650-65678	6	0.793
NZ_JNGJ01000024_1	1.34\|7170\|29\|NZ_JNGJ01000024\|PILER-CR	7170-7198	29	NZ_LR135245	Enterococcus faecium isolate E6988 plasmid 3	112907-112935	6	0.793
NZ_JNGJ01000024_1	1.34\|7170\|29\|NZ_JNGJ01000024\|PILER-CR	7170-7198	29	NZ_LR135256	Enterococcus faecium isolate E7098 plasmid 3	72035-72063	6	0.793
NZ_JNGJ01000024_1	1.34\|7170\|29\|NZ_JNGJ01000024\|PILER-CR	7170-7198	29	NZ_CP038997	Enterococcus faecium strain SRR24 plasmid pSRR24	81179-81207	6	0.793
NZ_JNGJ01000024_1	1.34\|7170\|29\|NZ_JNGJ01000024\|PILER-CR	7170-7198	29	NZ_CP019989	Enterococcus faecium isolate 2014-VREF-63 plasmid p63-1, complete sequence	68971-68999	6	0.793
NZ_JNGJ01000024_1	1.34\|7170\|29\|NZ_JNGJ01000024\|PILER-CR	7170-7198	29	NZ_CP044266	Enterococcus faecium strain V1836 plasmid pHVH-V1836-2, complete sequence	69554-69582	6	0.793
NZ_JNGJ01000024_1	1.34\|7170\|29\|NZ_JNGJ01000024\|PILER-CR	7170-7198	29	NZ_LR134107	Enterococcus faecium isolate E6043 plasmid 3	4258-4286	6	0.793
NZ_JNGJ01000024_1	1.34\|7170\|29\|NZ_JNGJ01000024\|PILER-CR	7170-7198	29	NZ_LR134107	Enterococcus faecium isolate E6043 plasmid 3	51515-51543	6	0.793
NZ_JNGJ01000024_1	1.34\|7170\|29\|NZ_JNGJ01000024\|PILER-CR	7170-7198	29	NZ_CP045014	Enterococcus faecium strain LAC7.2 plasmid pII, complete sequence	57284-57312	6	0.793
NZ_JNGJ01000024_1	1.34\|7170\|29\|NZ_JNGJ01000024\|PILER-CR	7170-7198	29	NZ_CP040742	Enterococcus faecium strain VRE1 plasmid pVRE1-VanA, complete sequence	22677-22705	6	0.793
NZ_JNGJ01000024_1	1.34\|7170\|29\|NZ_JNGJ01000024\|PILER-CR	7170-7198	29	MN831413	Enterococcus faecium strain M17/0314 plasmid pM17/0314, complete sequence	79900-79928	6	0.793
NZ_JNGJ01000024_1	1.34\|7170\|29\|NZ_JNGJ01000024\|PILER-CR	7170-7198	29	NZ_AP022343	Enterococcus faecium strain KUHS13 plasmid pELF2	39057-39085	6	0.793
NZ_JNGJ01000024_1	1.34\|7170\|29\|NZ_JNGJ01000024\|PILER-CR	7170-7198	29	NZ_CP041272	Enterococcus faecium strain VVEswe-S plasmid pVVEswe-S2	24903-24931	6	0.793
NZ_JNGJ01000024_1	1.34\|7170\|29\|NZ_JNGJ01000024\|PILER-CR	7170-7198	29	NZ_CP019994	Enterococcus faecium isolate 2014-VREF-268 plasmid p268-2	36356-36384	6	0.793
NZ_JNGJ01000024_1	1.34\|7170\|29\|NZ_JNGJ01000024\|PILER-CR	7170-7198	29	NZ_CP035656	Enterococcus faecium strain UAMSEF_09 plasmid unnamed2	56176-56204	6	0.793
NZ_JNGJ01000024_1	1.34\|7170\|29\|NZ_JNGJ01000024\|PILER-CR	7170-7198	29	NZ_CP035662	Enterococcus faecium strain UAMSEF_20 plasmid unnamed2	25072-25100	6	0.793
NZ_JNGJ01000024_1	1.34\|7170\|29\|NZ_JNGJ01000024\|PILER-CR	7170-7198	29	NZ_CP039730	Enterococcus faecium strain ZY2 plasmid pZY2	71282-71310	6	0.793
NZ_JNGJ01000024_1	1.34\|7170\|29\|NZ_JNGJ01000024\|PILER-CR	7170-7198	29	NZ_CP019971	Enterococcus faecium isolate 2014-VREF-114 plasmid p114-1 sequence	81700-81728	6	0.793
NZ_JNGJ01000024_1	1.34\|7170\|29\|NZ_JNGJ01000024\|PILER-CR	7170-7198	29	NZ_CP040238	Enterococcus faecium strain VB3025 plasmid unnamed2, complete sequence	119199-119227	6	0.793
NZ_JNGJ01000024_1	1.34\|7170\|29\|NZ_JNGJ01000024\|PILER-CR	7170-7198	29	NZ_CP012462	Enterococcus faecium strain ISMMS_VRE_7 plasmid ISMMS_VRE7_p2	53039-53067	6	0.793
NZ_JNGJ01000024_1	1.34\|7170\|29\|NZ_JNGJ01000024\|PILER-CR	7170-7198	29	NZ_MG640601	Enterococcus faecium strain SRR6 plasmid pEMSRR6, complete sequence	77050-77078	6	0.793
NZ_JNGJ01000024_1	1.34\|7170\|29\|NZ_JNGJ01000024\|PILER-CR	7170-7198	29	NZ_LR214986	Mycoplasma cynos strain NCTC10142 plasmid 13	743688-743716	6	0.793
NZ_JNGJ01000024_1	1.34\|7170\|29\|NZ_JNGJ01000024\|PILER-CR	7170-7198	29	NZ_LT598665	Enterococcus faecium isolate Ef_aus00233 plasmid 3	60226-60254	6	0.793
NZ_JNGJ01000024_1	1.34\|7170\|29\|NZ_JNGJ01000024\|PILER-CR	7170-7198	29	NC_018965	Staphylococcus aureus plasmid SAP077A, complete sequence	14325-14353	6	0.793
NZ_JNGJ01000024_1	1.34\|7170\|29\|NZ_JNGJ01000024\|PILER-CR	7170-7198	29	NC_019009	Staphylococcus aureus plasmid SAP078A, complete sequence	34587-34615	6	0.793
NZ_JNGJ01000024_1	1.34\|7170\|29\|NZ_JNGJ01000024\|PILER-CR	7170-7198	29	NZ_CP026065	Staphylococcus aureus strain FDAARGOS_19 plasmid unnamed	14932-14960	6	0.793
NZ_JNGJ01000024_1	1.34\|7170\|29\|NZ_JNGJ01000024\|PILER-CR	7170-7198	29	NC_013340	Staphylococcus aureus plasmid SAP076A, complete sequence	9219-9247	6	0.793
NZ_JNGJ01000024_1	1.34\|7170\|29\|NZ_JNGJ01000024\|PILER-CR	7170-7198	29	NC_014535	Gloeothece verrucosa PCC 7822 plasmid Cy782206, complete sequence	2899-2927	6	0.793
NZ_JNGJ01000024_1	1.34\|7170\|29\|NZ_JNGJ01000024\|PILER-CR	7170-7198	29	NZ_CP010104	Francisella tularensis subsp. novicida strain DPG 3A-IS plasmid unnamed, complete sequence	22583-22611	6	0.793
NZ_JNGJ01000024_1	1.34\|7170\|29\|NZ_JNGJ01000024\|PILER-CR	7170-7198	29	NZ_CP010104	Francisella tularensis subsp. novicida strain DPG 3A-IS plasmid unnamed, complete sequence	25706-25734	6	0.793
NZ_JNGJ01000024_1	1.34\|7170\|29\|NZ_JNGJ01000024\|PILER-CR	7170-7198	29	NZ_CP028469	Staphylococcus aureus strain IT1-S plasmid pIT1-S, complete sequence	8211-8239	6	0.793
NZ_JNGJ01000024_1	1.34\|7170\|29\|NZ_JNGJ01000024\|PILER-CR	7170-7198	29	MN694237	Marine virus AFVG_250M414, complete genome	17909-17937	6	0.793
NZ_JNGJ01000024_1	1.34\|7170\|29\|NZ_JNGJ01000024\|PILER-CR	7170-7198	29	MT028491	Ochrobactrum phage vB_OspM_OC, complete genome	202813-202841	6	0.793
NZ_JNGJ01000024_1	1.34\|7170\|29\|NZ_JNGJ01000024\|PILER-CR	7170-7198	29	MN694607	Marine virus AFVG_250M465, complete genome	20845-20873	6	0.793
NZ_JNGJ01000024_1	1.34\|7170\|29\|NZ_JNGJ01000024\|PILER-CR	7170-7198	29	MN508817	Yersinia phage JC221, partial genome	44268-44296	6	0.793
NZ_JNGJ01000024_1	1.34\|7170\|29\|NZ_JNGJ01000024\|PILER-CR	7170-7198	29	MN694635	Marine virus AFVG_250M372, complete genome	17898-17926	6	0.793
NZ_JNGJ01000024_1	1.35\|7236\|29\|NZ_JNGJ01000024\|PILER-CR	7236-7264	29	NZ_CP024940	Paraburkholderia hospita strain mHSR1 plasmid pmHSR1_P, complete sequence	575781-575809	6	0.793
NZ_JNGJ01000024_1	1.35\|7236\|29\|NZ_JNGJ01000024\|PILER-CR	7236-7264	29	NZ_CP039899	Agrobacterium tumefaciens strain CFBP5877 plasmid pAtCFBP5877a, complete sequence	322320-322348	6	0.793
NZ_JNGJ01000024_1	1.35\|7236\|29\|NZ_JNGJ01000024\|PILER-CR	7236-7264	29	NZ_CP039890	Agrobacterium tumefaciens strain CFBP5499 plasmid pAtCFBP5499a, complete sequence	322320-322348	6	0.793
NZ_JNGJ01000024_1	1.1\|5254\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	5254-5283	30	KT878766	Staphylococcus phage P1105, complete genome	32141-32170	7	0.767
NZ_JNGJ01000024_1	1.1\|5254\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	5254-5283	30	NC_025460	Staphylococcus phage phiSa119, complete genome	7352-7381	7	0.767
NZ_JNGJ01000024_1	1.5\|5518\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	5518-5547	30	MN693453	Marine virus AFVG_25M364, complete genome	1719-1748	7	0.767
NZ_JNGJ01000024_1	1.13\|6047\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT,PILER-CR	6047-6076	30	NZ_LR134421	Legionella adelaidensis strain NCTC12735 genome assembly, plasmid: 12	42588-42617	7	0.767
NZ_JNGJ01000024_1	1.14\|6113\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT,PILER-CR	6113-6142	30	NC_048855	Phage NBEco002, complete genome	99824-99853	7	0.767
NZ_JNGJ01000024_1	1.14\|6113\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT,PILER-CR	6113-6142	30	NC_017969	Escherichia phage bV_EcoS_AKFV33, complete genome	99958-99987	7	0.767
NZ_JNGJ01000024_1	1.14\|6113\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT,PILER-CR	6113-6142	30	NC_024139	Escherichia phage vB_EcoS_FFH1, complete genome	99882-99911	7	0.767
NZ_JNGJ01000024_1	1.14\|6113\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT,PILER-CR	6113-6142	30	MN022787	Salmonella virus VSe12, complete genome	101179-101208	7	0.767
NZ_JNGJ01000024_1	1.15\|6179\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT,PILER-CR	6179-6208	30	MT521992	Rhodococcus phage NiceHouse, complete genome	18590-18619	7	0.767
NZ_JNGJ01000024_1	1.18\|6377\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT,PILER-CR	6377-6406	30	NZ_CP045385	Ruegeria sp. THAF33 plasmid pTHAF33_a, complete sequence	374312-374341	7	0.767
NZ_JNGJ01000024_1	1.24\|6773\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT,PILER-CR	6773-6802	30	NZ_CP029234	Sinorhizobium fredii CCBAU 45436 plasmid pSF45436d, complete sequence	189763-189792	7	0.767
NZ_JNGJ01000024_1	1.28\|7038\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7038-7067	30	NC_015223	Nitrosomonas sp. AL212 plasmid pNAL21201, complete sequence	3346-3375	7	0.767
NZ_JNGJ01000024_1	1.30\|7170\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7170-7199	30	NZ_CP025427	Enterococcus faecium strain SC4 plasmid p2, complete sequence	34475-34504	7	0.767
NZ_JNGJ01000024_1	1.30\|7170\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7170-7199	30	NZ_CP041263	Enterococcus faecium strain VVEswe-R plasmid pVVEswe-R2	64871-64900	7	0.767
NZ_JNGJ01000024_1	1.30\|7170\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7170-7199	30	NZ_CP027511	Enterococcus faecium strain AUSMDU00004055 plasmid unnamed5, complete sequence	32645-32674	7	0.767
NZ_JNGJ01000024_1	1.30\|7170\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7170-7199	30	NZ_LR135332	Enterococcus faecium isolate E7471 plasmid 2	55763-55792	7	0.767
NZ_JNGJ01000024_1	1.30\|7170\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7170-7199	30	NZ_LR135332	Enterococcus faecium isolate E7471 plasmid 2	106757-106786	7	0.767
NZ_JNGJ01000024_1	1.30\|7170\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7170-7199	30	NZ_LR135245	Enterococcus faecium isolate E6988 plasmid 3	65650-65679	7	0.767
NZ_JNGJ01000024_1	1.30\|7170\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7170-7199	30	NZ_LR135245	Enterococcus faecium isolate E6988 plasmid 3	112906-112935	7	0.767
NZ_JNGJ01000024_1	1.30\|7170\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7170-7199	30	NZ_LR135256	Enterococcus faecium isolate E7098 plasmid 3	72035-72064	7	0.767
NZ_JNGJ01000024_1	1.30\|7170\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7170-7199	30	NZ_CP038997	Enterococcus faecium strain SRR24 plasmid pSRR24	81179-81208	7	0.767
NZ_JNGJ01000024_1	1.30\|7170\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7170-7199	30	NZ_CP019989	Enterococcus faecium isolate 2014-VREF-63 plasmid p63-1, complete sequence	68971-69000	7	0.767
NZ_JNGJ01000024_1	1.30\|7170\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7170-7199	30	NZ_CP044266	Enterococcus faecium strain V1836 plasmid pHVH-V1836-2, complete sequence	69553-69582	7	0.767
NZ_JNGJ01000024_1	1.30\|7170\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7170-7199	30	NZ_LR134107	Enterococcus faecium isolate E6043 plasmid 3	4258-4287	7	0.767
NZ_JNGJ01000024_1	1.30\|7170\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7170-7199	30	NZ_LR134107	Enterococcus faecium isolate E6043 plasmid 3	51514-51543	7	0.767
NZ_JNGJ01000024_1	1.30\|7170\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7170-7199	30	NC_010371	Finegoldia magna ATCC 29328 plasmid pFMC, complete sequence	179399-179428	7	0.767
NZ_JNGJ01000024_1	1.30\|7170\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7170-7199	30	NZ_CP045014	Enterococcus faecium strain LAC7.2 plasmid pII, complete sequence	57284-57313	7	0.767
NZ_JNGJ01000024_1	1.30\|7170\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7170-7199	30	NZ_CP040742	Enterococcus faecium strain VRE1 plasmid pVRE1-VanA, complete sequence	22676-22705	7	0.767
NZ_JNGJ01000024_1	1.30\|7170\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7170-7199	30	MN831413	Enterococcus faecium strain M17/0314 plasmid pM17/0314, complete sequence	79900-79929	7	0.767
NZ_JNGJ01000024_1	1.30\|7170\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7170-7199	30	NZ_AP022343	Enterococcus faecium strain KUHS13 plasmid pELF2	39056-39085	7	0.767
NZ_JNGJ01000024_1	1.30\|7170\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7170-7199	30	NZ_CP041272	Enterococcus faecium strain VVEswe-S plasmid pVVEswe-S2	24902-24931	7	0.767
NZ_JNGJ01000024_1	1.30\|7170\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7170-7199	30	NZ_CP019994	Enterococcus faecium isolate 2014-VREF-268 plasmid p268-2	36355-36384	7	0.767
NZ_JNGJ01000024_1	1.30\|7170\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7170-7199	30	NZ_CP035656	Enterococcus faecium strain UAMSEF_09 plasmid unnamed2	56176-56205	7	0.767
NZ_JNGJ01000024_1	1.30\|7170\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7170-7199	30	NZ_CP035662	Enterococcus faecium strain UAMSEF_20 plasmid unnamed2	25071-25100	7	0.767
NZ_JNGJ01000024_1	1.30\|7170\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7170-7199	30	NZ_CP039730	Enterococcus faecium strain ZY2 plasmid pZY2	71282-71311	7	0.767
NZ_JNGJ01000024_1	1.30\|7170\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7170-7199	30	NZ_CP019971	Enterococcus faecium isolate 2014-VREF-114 plasmid p114-1 sequence	81700-81729	7	0.767
NZ_JNGJ01000024_1	1.30\|7170\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7170-7199	30	NZ_CP040238	Enterococcus faecium strain VB3025 plasmid unnamed2, complete sequence	119199-119228	7	0.767
NZ_JNGJ01000024_1	1.30\|7170\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7170-7199	30	NZ_CP012462	Enterococcus faecium strain ISMMS_VRE_7 plasmid ISMMS_VRE7_p2	53039-53068	7	0.767
NZ_JNGJ01000024_1	1.30\|7170\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7170-7199	30	NZ_MG640601	Enterococcus faecium strain SRR6 plasmid pEMSRR6, complete sequence	77050-77079	7	0.767
NZ_JNGJ01000024_1	1.30\|7170\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7170-7199	30	NZ_LR214986	Mycoplasma cynos strain NCTC10142 plasmid 13	743688-743717	7	0.767
NZ_JNGJ01000024_1	1.30\|7170\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7170-7199	30	NZ_LT598665	Enterococcus faecium isolate Ef_aus00233 plasmid 3	60226-60255	7	0.767
NZ_JNGJ01000024_1	1.30\|7170\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7170-7199	30	NC_018965	Staphylococcus aureus plasmid SAP077A, complete sequence	14324-14353	7	0.767
NZ_JNGJ01000024_1	1.30\|7170\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7170-7199	30	NC_019009	Staphylococcus aureus plasmid SAP078A, complete sequence	34587-34616	7	0.767
NZ_JNGJ01000024_1	1.30\|7170\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7170-7199	30	NZ_CP026065	Staphylococcus aureus strain FDAARGOS_19 plasmid unnamed	14932-14961	7	0.767
NZ_JNGJ01000024_1	1.30\|7170\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7170-7199	30	NC_013340	Staphylococcus aureus plasmid SAP076A, complete sequence	9218-9247	7	0.767
NZ_JNGJ01000024_1	1.30\|7170\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7170-7199	30	NC_014535	Gloeothece verrucosa PCC 7822 plasmid Cy782206, complete sequence	2899-2928	7	0.767
NZ_JNGJ01000024_1	1.30\|7170\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7170-7199	30	NZ_CP010104	Francisella tularensis subsp. novicida strain DPG 3A-IS plasmid unnamed, complete sequence	22583-22612	7	0.767
NZ_JNGJ01000024_1	1.30\|7170\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7170-7199	30	NZ_CP010104	Francisella tularensis subsp. novicida strain DPG 3A-IS plasmid unnamed, complete sequence	25706-25735	7	0.767
NZ_JNGJ01000024_1	1.30\|7170\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7170-7199	30	NZ_CP028469	Staphylococcus aureus strain IT1-S plasmid pIT1-S, complete sequence	8210-8239	7	0.767
NZ_JNGJ01000024_1	1.30\|7170\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7170-7199	30	MN694237	Marine virus AFVG_250M414, complete genome	17908-17937	7	0.767
NZ_JNGJ01000024_1	1.30\|7170\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7170-7199	30	MT028491	Ochrobactrum phage vB_OspM_OC, complete genome	202813-202842	7	0.767
NZ_JNGJ01000024_1	1.30\|7170\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7170-7199	30	MN694607	Marine virus AFVG_250M465, complete genome	20845-20874	7	0.767
NZ_JNGJ01000024_1	1.30\|7170\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7170-7199	30	MN508817	Yersinia phage JC221, partial genome	44268-44297	7	0.767
NZ_JNGJ01000024_1	1.30\|7170\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7170-7199	30	MN694635	Marine virus AFVG_250M372, complete genome	17897-17926	7	0.767
NZ_JNGJ01000024_1	1.31\|7236\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7236-7265	30	NZ_CP024940	Paraburkholderia hospita strain mHSR1 plasmid pmHSR1_P, complete sequence	575781-575810	7	0.767
NZ_JNGJ01000024_1	1.31\|7236\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7236-7265	30	NZ_CP039899	Agrobacterium tumefaciens strain CFBP5877 plasmid pAtCFBP5877a, complete sequence	322320-322349	7	0.767
NZ_JNGJ01000024_1	1.31\|7236\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7236-7265	30	NZ_CP039890	Agrobacterium tumefaciens strain CFBP5499 plasmid pAtCFBP5499a, complete sequence	322320-322349	7	0.767
NZ_JNGJ01000024_1	1.34\|7170\|29\|NZ_JNGJ01000024\|PILER-CR	7170-7198	29	NZ_LR214939	Mycoplasma salivarium strain NCTC10113 plasmid 2	96172-96200	7	0.759
NZ_JNGJ01000024_1	1.34\|7170\|29\|NZ_JNGJ01000024\|PILER-CR	7170-7198	29	NC_010371	Finegoldia magna ATCC 29328 plasmid pFMC, complete sequence	179400-179428	7	0.759
NZ_JNGJ01000024_1	1.34\|7170\|29\|NZ_JNGJ01000024\|PILER-CR	7170-7198	29	NZ_CP011490	Staphylococcus pseudintermedius strain 222 plasmid p222, complete sequence	5522-5550	7	0.759
NZ_JNGJ01000024_1	1.35\|7236\|29\|NZ_JNGJ01000024\|PILER-CR	7236-7264	29	NZ_CP040759	Paracoccus sp. 2251 plasmid unnamed8, complete sequence	57863-57891	7	0.759
NZ_JNGJ01000024_1	1.1\|5254\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	5254-5283	30	JN638751	Bacillus phage G, complete genome	221970-221999	8	0.733
NZ_JNGJ01000024_1	1.3\|5386\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	5386-5415	30	KF771238	Escherichia phage bV_EcoS_AHS24, complete genome	15160-15189	8	0.733
NZ_JNGJ01000024_1	1.3\|5386\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	5386-5415	30	KF771236	Escherichia phage bV_EcoS_AHP24, complete genome	15159-15188	8	0.733
NZ_JNGJ01000024_1	1.3\|5386\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	5386-5415	30	NZ_CP017832	Butyrivibrio hungatei strain MB2003 plasmid pNP144, complete sequence	78547-78576	8	0.733
NZ_JNGJ01000024_1	1.3\|5386\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	5386-5415	30	MN693012	Marine virus AFVG_117M3, complete genome	51346-51375	8	0.733
NZ_JNGJ01000024_1	1.3\|5386\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	5386-5415	30	NC_007581	Clostridium phage c-st, complete genome	83359-83388	8	0.733
NZ_JNGJ01000024_1	1.3\|5386\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	5386-5415	30	AP008983	Clostridium phage c-st genomic DNA, complete genome	83359-83388	8	0.733
NZ_JNGJ01000024_1	1.4\|5452\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	5452-5481	30	MT932211	Escherichia phage VEcB, complete genome	142320-142349	8	0.733
NZ_JNGJ01000024_1	1.4\|5452\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	5452-5481	30	MN850573	Escherichia phage muut, complete genome	70019-70048	8	0.733
NZ_JNGJ01000024_1	1.4\|5452\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	5452-5481	30	MN850601	Escherichia phage inny, complete genome	133203-133232	8	0.733
NZ_JNGJ01000024_1	1.4\|5452\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	5452-5481	30	FR775895	Enterobacteria phage phi92, complete genome	143564-143593	8	0.733
NZ_JNGJ01000024_1	1.4\|5452\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	5452-5481	30	MN850632	Escherichia phage alia, complete genome	83841-83870	8	0.733
NZ_JNGJ01000024_1	1.5\|5518\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	5518-5547	30	AP014255	Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S25-C160, * SEQUENCING IN PROGRESS *	5379-5408	8	0.733
NZ_JNGJ01000024_1	1.5\|5518\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	5518-5547	30	MT349887	Acinetobacter phage 5W, complete genome	19645-19674	8	0.733
NZ_JNGJ01000024_1	1.23\|6707\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT,PILER-CR	6707-6736	30	NZ_CP013462	Burkholderia ubonensis strain MSMB1471WGS plasmid pMSMB1471, complete sequence	10086-10115	8	0.733
NZ_JNGJ01000024_1	1.26\|6905\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT,PILER-CR	6905-6934	30	AP018399	Xanthomonas phage XacN1 DNA, complete genome	59853-59882	8	0.733
NZ_JNGJ01000024_1	1.26\|6905\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT,PILER-CR	6905-6934	30	AP018399	Xanthomonas phage XacN1 DNA, complete genome	378648-378677	8	0.733
NZ_JNGJ01000024_1	1.28\|7038\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7038-7067	30	NC_010379	Clostridium botulinum B1 str. Okra plasmid pCLD, complete sequence	139099-139128	8	0.733
NZ_JNGJ01000024_1	1.28\|7038\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7038-7067	30	MN692983	Marine virus AFVG_117M11, complete genome	3682-3711	8	0.733
NZ_JNGJ01000024_1	1.30\|7170\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7170-7199	30	NZ_LR214939	Mycoplasma salivarium strain NCTC10113 plasmid 2	96171-96200	8	0.733
NZ_JNGJ01000024_1	1.30\|7170\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7170-7199	30	NZ_CP035176	Lactobacillus plantarum strain SRCM103426 plasmid unnamed2	15623-15652	8	0.733
NZ_JNGJ01000024_1	1.30\|7170\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7170-7199	30	NZ_CP035115	Lactobacillus plantarum strain SRCM103295 plasmid unnamed2	39839-39868	8	0.733
NZ_JNGJ01000024_1	1.30\|7170\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7170-7199	30	NZ_CP035567	Lactobacillus plantarum strain SRCM103300 plasmid unnamed1	73108-73137	8	0.733
NZ_JNGJ01000024_1	1.30\|7170\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7170-7199	30	NZ_CP025417	Lactobacillus plantarum strain X7021 plasmid unnamed5, complete sequence	18402-18431	8	0.733
NZ_JNGJ01000024_1	1.30\|7170\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7170-7199	30	NC_021519	Lactobacillus plantarum 16 plasmid Lp16H, complete sequence	8495-8524	8	0.733
NZ_JNGJ01000024_1	1.30\|7170\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7170-7199	30	NZ_CP046661	Lactobacillus plantarum strain 83-18 plasmid p83-18.1, complete sequence	35311-35340	8	0.733
NZ_JNGJ01000024_1	1.30\|7170\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7170-7199	30	NZ_CP046662	Lactobacillus plantarum strain 83-18 plasmid p83-18.2, complete sequence	14284-14313	8	0.733
NZ_JNGJ01000024_1	1.30\|7170\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7170-7199	30	NZ_CP050809	Lactobacillus plantarum strain SPC-SNU 72-2 plasmid pLBP443, complete sequence	3751-3780	8	0.733
NZ_JNGJ01000024_1	1.30\|7170\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7170-7199	30	NZ_CP011490	Staphylococcus pseudintermedius strain 222 plasmid p222, complete sequence	5522-5551	8	0.733
NZ_JNGJ01000024_1	1.31\|7236\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7236-7265	30	NZ_CP040759	Paracoccus sp. 2251 plasmid unnamed8, complete sequence	57863-57892	8	0.733
NZ_JNGJ01000024_1	1.34\|7170\|29\|NZ_JNGJ01000024\|PILER-CR	7170-7198	29	NZ_CP020426	Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence	9365-9393	8	0.724
NZ_JNGJ01000024_1	1.34\|7170\|29\|NZ_JNGJ01000024\|PILER-CR	7170-7198	29	NZ_CP035176	Lactobacillus plantarum strain SRCM103426 plasmid unnamed2	15624-15652	8	0.724
NZ_JNGJ01000024_1	1.34\|7170\|29\|NZ_JNGJ01000024\|PILER-CR	7170-7198	29	NZ_CP035115	Lactobacillus plantarum strain SRCM103295 plasmid unnamed2	39839-39867	8	0.724
NZ_JNGJ01000024_1	1.34\|7170\|29\|NZ_JNGJ01000024\|PILER-CR	7170-7198	29	NZ_CP035567	Lactobacillus plantarum strain SRCM103300 plasmid unnamed1	73108-73136	8	0.724
NZ_JNGJ01000024_1	1.34\|7170\|29\|NZ_JNGJ01000024\|PILER-CR	7170-7198	29	NZ_CP025417	Lactobacillus plantarum strain X7021 plasmid unnamed5, complete sequence	18403-18431	8	0.724
NZ_JNGJ01000024_1	1.34\|7170\|29\|NZ_JNGJ01000024\|PILER-CR	7170-7198	29	NC_021519	Lactobacillus plantarum 16 plasmid Lp16H, complete sequence	8495-8523	8	0.724
NZ_JNGJ01000024_1	1.34\|7170\|29\|NZ_JNGJ01000024\|PILER-CR	7170-7198	29	NZ_CP046661	Lactobacillus plantarum strain 83-18 plasmid p83-18.1, complete sequence	35312-35340	8	0.724
NZ_JNGJ01000024_1	1.34\|7170\|29\|NZ_JNGJ01000024\|PILER-CR	7170-7198	29	NZ_CP046662	Lactobacillus plantarum strain 83-18 plasmid p83-18.2, complete sequence	14284-14312	8	0.724
NZ_JNGJ01000024_1	1.34\|7170\|29\|NZ_JNGJ01000024\|PILER-CR	7170-7198	29	NZ_CP050809	Lactobacillus plantarum strain SPC-SNU 72-2 plasmid pLBP443, complete sequence	3751-3779	8	0.724
NZ_JNGJ01000024_1	1.34\|7170\|29\|NZ_JNGJ01000024\|PILER-CR	7170-7198	29	MF547663	Clostridioides phage LIBA2945, complete genome	113801-113829	8	0.724
NZ_JNGJ01000024_1	1.34\|7170\|29\|NZ_JNGJ01000024\|PILER-CR	7170-7198	29	CP011970	Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence	112607-112635	8	0.724
NZ_JNGJ01000024_1	1.34\|7170\|29\|NZ_JNGJ01000024\|PILER-CR	7170-7198	29	LN681537	Clostridium phage phiCD211, complete genome	121469-121497	8	0.724
NZ_JNGJ01000024_1	1.3\|5386\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	5386-5415	30	MN694632	Marine virus AFVG_250M389, complete genome	59767-59796	9	0.7
NZ_JNGJ01000024_1	1.23\|6707\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT,PILER-CR	6707-6736	30	MW057858	Providencia phage PSTCR6, complete genome	157-186	9	0.7
NZ_JNGJ01000024_1	1.26\|6905\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT,PILER-CR	6905-6934	30	JN106164	Uncultured bacterium plasmid pAKD1, complete sequence	27224-27253	9	0.7
NZ_JNGJ01000024_1	1.27\|6971\|31\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT,PILER-CR	6971-7001	31	CP045557	Citrobacter sp. S39 plasmid pS39-2, complete sequence	86914-86944	9	0.71
NZ_JNGJ01000024_1	1.30\|7170\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7170-7199	30	NZ_CP020426	Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence	9364-9393	9	0.7
NZ_JNGJ01000024_1	1.30\|7170\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7170-7199	30	MF547663	Clostridioides phage LIBA2945, complete genome	113801-113830	9	0.7
NZ_JNGJ01000024_1	1.30\|7170\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7170-7199	30	CP011970	Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence	112607-112636	9	0.7
NZ_JNGJ01000024_1	1.30\|7170\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7170-7199	30	LN681537	Clostridium phage phiCD211, complete genome	121469-121498	9	0.7
NZ_JNGJ01000024_1	1.19\|6443\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT,PILER-CR	6443-6472	30	NZ_LR594660	Variovorax sp. PBL-H6 plasmid 2	772909-772938	10	0.667
NZ_JNGJ01000024_1	1.19\|6443\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT,PILER-CR	6443-6472	30	NZ_LR594667	Variovorax sp. SRS16 plasmid 2	65251-65280	10	0.667
NZ_JNGJ01000024_1	1.19\|6443\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT,PILER-CR	6443-6472	30	NZ_LR594690	Variovorax sp. WDL1 plasmid 2	65071-65100	10	0.667
NZ_JNGJ01000024_1	1.19\|6443\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT,PILER-CR	6443-6472	30	NZ_LR594672	Variovorax sp. PBL-E5 plasmid 2	65251-65280	10	0.667
NZ_JNGJ01000024_1	1.28\|7038\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7038-7067	30	NZ_CP016361	Bacillus cereus strain M13 plasmid pBCM1301, complete sequence	3748-3777	10	0.667
NZ_JNGJ01000024_1	1.28\|7038\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7038-7067	30	NZ_KY940428	UNVERIFIED: Bacillus sp. (in: Bacteria) strain PUMK-07 plasmid pMK-07, complete sequence	178471-178500	10	0.667
NZ_JNGJ01000024_1	1.28\|7038\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7038-7067	30	NZ_CP009595	Bacillus cereus strain 3a plasmid pBFC_3, complete sequence	131247-131276	10	0.667
NZ_JNGJ01000024_1	1.28\|7038\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7038-7067	30	NC_011973	Bacillus cereus Q1 plasmid pBc239, complete sequence	171457-171486	10	0.667
NZ_JNGJ01000024_1	1.28\|7038\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7038-7067	30	NZ_CP016317	Bacillus cereus strain M3 plasmid pBCM301, complete sequence	169285-169314	10	0.667
NZ_JNGJ01000024_1	1.28\|7038\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7038-7067	30	NZ_CP047086	Bacillus paranthracis strain BC307 plasmid pCE1, complete sequence	3747-3776	10	0.667
NZ_JNGJ01000024_1	1.28\|7038\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7038-7067	30	NZ_CP009606	Bacillus cereus strain S2-8 plasmid pBFR_2, complete sequence	309960-309989	10	0.667
NZ_JNGJ01000024_1	1.28\|7038\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7038-7067	30	NZ_CP041978	Bacillus pacificus strain NCCP 15909 plasmid unnamed1, complete sequence	107884-107913	10	0.667
NZ_JNGJ01000024_1	1.28\|7038\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7038-7067	30	NC_011655	Bacillus cereus AH187 plasmid pAH187_270, complete sequence	159582-159611	10	0.667
NZ_JNGJ01000024_1	1.28\|7038\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7038-7067	30	NC_010924	Bacillus cereus strain AH187 plasmid pCER270, complete sequence	215991-216020	10	0.667
NZ_JNGJ01000024_1	1.28\|7038\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7038-7067	30	NC_011777	Bacillus cereus AH820 plasmid pAH820_272, complete sequence	160923-160952	10	0.667
NZ_JNGJ01000024_1	1.28\|7038\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7038-7067	30	CP045776	Bacillus paranthracis strain CFSAN068816 plasmid p1CFSAN068816, complete sequence	208416-208445	10	0.667
NZ_JNGJ01000024_1	1.28\|7038\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7038-7067	30	NZ_CP053994	Bacillus cereus strain FDAARGOS_780 plasmid unnamed1, complete sequence	71253-71282	10	0.667
NZ_JNGJ01000024_1	1.28\|7038\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7038-7067	30	CP041980	Bacillus paranthracis strain NCCP 15910 plasmid unnamed, complete sequence	90843-90872	10	0.667
NZ_JNGJ01000024_1	1.28\|7038\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7038-7067	30	NC_016792	Bacillus cereus NC7401 plasmid pNCcld, complete sequence	214860-214889	10	0.667
NZ_JNGJ01000024_1	1.28\|7038\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7038-7067	30	NZ_CP040343	Bacillus cereus strain DLOU-Weihai plasmid unnamed1, complete sequence	30806-30835	10	0.667
NZ_JNGJ01000024_1	1.28\|7038\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7038-7067	30	NZ_CP033789	Bacillus sp. FDAARGOS_527 plasmid unnamed2, complete sequence	272077-272106	10	0.667
NZ_JNGJ01000024_1	1.28\|7038\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7038-7067	30	NZ_CP053992	Bacillus cereus strain FDAARGOS_781 plasmid unnamed2, complete sequence	54269-54298	10	0.667

1. spacer 1.2|5320|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to DQ003637 (Listeria phage A500, complete genome) position: , mismatch: 0, identity: 1.0

agcttgcgtttagaggacgaagaaaaacta	CRISPR spacer
agcttgcgtttagaggacgaagaaaaacta	Protospacer
******************************

2. spacer 1.6|5584|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NZ_LR134403 (Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence) position: , mismatch: 0, identity: 1.0

taagcgtaatattaatgtcaaagcttctag	CRISPR spacer
taagcgtaatattaatgtcaaagcttctag	Protospacer
******************************

3. spacer 1.6|5584|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to KJ094023 (Listeria phage LP-101, complete genome) position: , mismatch: 0, identity: 1.0

taagcgtaatattaatgtcaaagcttctag	CRISPR spacer
taagcgtaatattaatgtcaaagcttctag	Protospacer
******************************

4. spacer 1.14|6113|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT,PILER-CR matches to NC_009813 (Listeria phage B054, complete genome) position: , mismatch: 0, identity: 1.0

gtgtttctttcccaccttctggttcaacgc	CRISPR spacer
gtgtttctttcccaccttctggttcaacgc	Protospacer
******************************

5. spacer 1.15|6179|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT,PILER-CR matches to KP399678 (Listeria phage vB_LmoS_293, complete genome) position: , mismatch: 0, identity: 1.0

gctgcctcgctttactcttcgttatctcca	CRISPR spacer
gctgcctcgctttactcttcgttatctcca	Protospacer
******************************

6. spacer 1.23|6707|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT,PILER-CR matches to KJ094022 (Listeria phage LP-030-3, complete genome) position: , mismatch: 0, identity: 1.0

gcgcttcccatcgatttaaacgcatttaca	CRISPR spacer
gcgcttcccatcgatttaaacgcatttaca	Protospacer
******************************

7. spacer 1.25|6839|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT,PILER-CR matches to MH299806 (Listeria phage LP-KV022, complete genome) position: , mismatch: 0, identity: 1.0

gccttgcttgacccaactagtgacttcttc	CRISPR spacer
gccttgcttgacccaactagtgacttcttc	Protospacer
******************************

8. spacer 1.25|6839|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT,PILER-CR matches to JB137888 (Sequence 7 from Patent WO2012159774) position: , mismatch: 0, identity: 1.0

gccttgcttgacccaactagtgacttcttc	CRISPR spacer
gccttgcttgacccaactagtgacttcttc	Protospacer
******************************

9. spacer 1.25|6839|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT,PILER-CR matches to KJ094025 (Listeria phage LP-032 contig 2, partial genome) position: , mismatch: 0, identity: 1.0

gccttgcttgacccaactagtgacttcttc	CRISPR spacer
gccttgcttgacccaactagtgacttcttc	Protospacer
******************************

10. spacer 1.25|6839|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT,PILER-CR matches to MN114083 (Listeria phage LP-013, complete genome) position: , mismatch: 0, identity: 1.0

gccttgcttgacccaactagtgacttcttc	CRISPR spacer
gccttgcttgacccaactagtgacttcttc	Protospacer
******************************

11. spacer 1.25|6839|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT,PILER-CR matches to NC_021785 (Listeria phage LP-110, complete genome) position: , mismatch: 0, identity: 1.0

gccttgcttgacccaactagtgacttcttc	CRISPR spacer
gccttgcttgacccaactagtgacttcttc	Protospacer
******************************

12. spacer 1.25|6839|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT,PILER-CR matches to MN128593 (Listeria phage LP-031, complete genome) position: , mismatch: 0, identity: 1.0

gccttgcttgacccaactagtgacttcttc	CRISPR spacer
gccttgcttgacccaactagtgacttcttc	Protospacer
******************************

13. spacer 1.25|6839|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT,PILER-CR matches to MN904502 (Listeria phage LP-018, complete genome) position: , mismatch: 0, identity: 1.0

gccttgcttgacccaactagtgacttcttc	CRISPR spacer
gccttgcttgacccaactagtgacttcttc	Protospacer
******************************

14. spacer 1.25|6839|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT,PILER-CR matches to JX442241 (Listeria phage P70, complete genome) position: , mismatch: 0, identity: 1.0

gccttgcttgacccaactagtgacttcttc	CRISPR spacer
gccttgcttgacccaactagtgacttcttc	Protospacer
******************************

15. spacer 1.25|6839|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT,PILER-CR matches to KJ094020 (Listeria phage LP-026, complete genome) position: , mismatch: 0, identity: 1.0

gccttgcttgacccaactagtgacttcttc	CRISPR spacer
gccttgcttgacccaactagtgacttcttc	Protospacer
******************************

16. spacer 1.25|6839|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT,PILER-CR matches to MN114082 (Listeria phage LP-010, complete genome) position: , mismatch: 0, identity: 1.0

gccttgcttgacccaactagtgacttcttc	CRISPR spacer
gccttgcttgacccaactagtgacttcttc	Protospacer
******************************

17. spacer 1.27|6971|31|NZ_JNGJ01000024|CRISPRCasFinder,CRT,PILER-CR matches to KJ094023 (Listeria phage LP-101, complete genome) position: , mismatch: 0, identity: 1.0

attcgtgaatgccgacaatcgttcatttcca	CRISPR spacer
attcgtgaatgccgacaatcgttcatttcca	Protospacer
*******************************

18. spacer 1.29|7104|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to MT500540 (Listeria phage LP-HM00113468, complete genome) position: , mismatch: 0, identity: 1.0

tcgtccactctagtagcatctaggtctagg	CRISPR spacer
tcgtccactctagtagcatctaggtctagg	Protospacer
******************************

19. spacer 1.29|7104|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NC_009812 (Listeria phage B025, complete genome) position: , mismatch: 0, identity: 1.0

tcgtccactctagtagcatctaggtctagg	CRISPR spacer
tcgtccactctagtagcatctaggtctagg	Protospacer
******************************

20. spacer 1.30|7170|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to MH341452 (Listeria phage PSU-VKH-LP040, complete genome) position: , mismatch: 0, identity: 1.0

gtcatttttaatagtttcaattgctgataa	CRISPR spacer
gtcatttttaatagtttcaattgctgataa	Protospacer
******************************

21. spacer 1.30|7170|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to DQ003637 (Listeria phage A500, complete genome) position: , mismatch: 0, identity: 1.0

gtcatttttaatagtttcaattgctgataa	CRISPR spacer
gtcatttttaatagtttcaattgctgataa	Protospacer
******************************

22. spacer 1.30|7170|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to KP399677 (Listeria phage vB_LmoS_188, complete genome) position: , mismatch: 0, identity: 1.0

gtcatttttaatagtttcaattgctgataa	CRISPR spacer
gtcatttttaatagtttcaattgctgataa	Protospacer
******************************

23. spacer 1.30|7170|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to KJ094022 (Listeria phage LP-030-3, complete genome) position: , mismatch: 0, identity: 1.0

gtcatttttaatagtttcaattgctgataa	CRISPR spacer
gtcatttttaatagtttcaattgctgataa	Protospacer
******************************

24. spacer 1.30|7170|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to KP399678 (Listeria phage vB_LmoS_293, complete genome) position: , mismatch: 0, identity: 1.0

gtcatttttaatagtttcaattgctgataa	CRISPR spacer
gtcatttttaatagtttcaattgctgataa	Protospacer
******************************

25. spacer 1.31|7236|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to MH341451 (Listeria phage PSU-VKH-LP019, complete genome) position: , mismatch: 0, identity: 1.0

tcaaaagcgcgcatgaggaagaaatcacga	CRISPR spacer
tcaaaagcgcgcatgaggaagaaatcacga	Protospacer
******************************

26. spacer 1.31|7236|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to KP399677 (Listeria phage vB_LmoS_188, complete genome) position: , mismatch: 0, identity: 1.0

tcaaaagcgcgcatgaggaagaaatcacga	CRISPR spacer
tcaaaagcgcgcatgaggaagaaatcacga	Protospacer
******************************

27. spacer 1.31|7236|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to DQ003642 (Listeria phage A006, complete genome) position: , mismatch: 0, identity: 1.0

tcaaaagcgcgcatgaggaagaaatcacga	CRISPR spacer
tcaaaagcgcgcatgaggaagaaatcacga	Protospacer
******************************

28. spacer 1.33|7104|29|NZ_JNGJ01000024|PILER-CR matches to MT500540 (Listeria phage LP-HM00113468, complete genome) position: , mismatch: 0, identity: 1.0

tcgtccactctagtagcatctaggtctag	CRISPR spacer
tcgtccactctagtagcatctaggtctag	Protospacer
*****************************

29. spacer 1.33|7104|29|NZ_JNGJ01000024|PILER-CR matches to NC_009812 (Listeria phage B025, complete genome) position: , mismatch: 0, identity: 1.0

tcgtccactctagtagcatctaggtctag	CRISPR spacer
tcgtccactctagtagcatctaggtctag	Protospacer
*****************************

30. spacer 1.34|7170|29|NZ_JNGJ01000024|PILER-CR matches to MH341452 (Listeria phage PSU-VKH-LP040, complete genome) position: , mismatch: 0, identity: 1.0

gtcatttttaatagtttcaattgctgata	CRISPR spacer
gtcatttttaatagtttcaattgctgata	Protospacer
*****************************

31. spacer 1.34|7170|29|NZ_JNGJ01000024|PILER-CR matches to DQ003637 (Listeria phage A500, complete genome) position: , mismatch: 0, identity: 1.0

gtcatttttaatagtttcaattgctgata	CRISPR spacer
gtcatttttaatagtttcaattgctgata	Protospacer
*****************************

32. spacer 1.34|7170|29|NZ_JNGJ01000024|PILER-CR matches to KP399677 (Listeria phage vB_LmoS_188, complete genome) position: , mismatch: 0, identity: 1.0

gtcatttttaatagtttcaattgctgata	CRISPR spacer
gtcatttttaatagtttcaattgctgata	Protospacer
*****************************

33. spacer 1.34|7170|29|NZ_JNGJ01000024|PILER-CR matches to KJ094022 (Listeria phage LP-030-3, complete genome) position: , mismatch: 0, identity: 1.0

gtcatttttaatagtttcaattgctgata	CRISPR spacer
gtcatttttaatagtttcaattgctgata	Protospacer
*****************************

34. spacer 1.34|7170|29|NZ_JNGJ01000024|PILER-CR matches to KP399678 (Listeria phage vB_LmoS_293, complete genome) position: , mismatch: 0, identity: 1.0

gtcatttttaatagtttcaattgctgata	CRISPR spacer
gtcatttttaatagtttcaattgctgata	Protospacer
*****************************

35. spacer 1.35|7236|29|NZ_JNGJ01000024|PILER-CR matches to MH341451 (Listeria phage PSU-VKH-LP019, complete genome) position: , mismatch: 0, identity: 1.0

tcaaaagcgcgcatgaggaagaaatcacg	CRISPR spacer
tcaaaagcgcgcatgaggaagaaatcacg	Protospacer
*****************************

36. spacer 1.35|7236|29|NZ_JNGJ01000024|PILER-CR matches to KP399677 (Listeria phage vB_LmoS_188, complete genome) position: , mismatch: 0, identity: 1.0

tcaaaagcgcgcatgaggaagaaatcacg	CRISPR spacer
tcaaaagcgcgcatgaggaagaaatcacg	Protospacer
*****************************

37. spacer 1.35|7236|29|NZ_JNGJ01000024|PILER-CR matches to DQ003642 (Listeria phage A006, complete genome) position: , mismatch: 0, identity: 1.0

tcaaaagcgcgcatgaggaagaaatcacg	CRISPR spacer
tcaaaagcgcgcatgaggaagaaatcacg	Protospacer
*****************************

38. spacer 1.2|5320|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to KJ094022 (Listeria phage LP-030-3, complete genome) position: , mismatch: 1, identity: 0.967

agcttgcgtttagaggacgaagaaaaacta	CRISPR spacer
agcttgcgtttggaggacgaagaaaaacta	Protospacer
***********.******************

39. spacer 1.3|5386|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to MT668624 (Listeria phage LP-Mix_6.2, complete genome) position: , mismatch: 1, identity: 0.967

cctttgtttagtttgtttatctatctaact	CRISPR spacer
cctttgtttagtttgtttacctatctaact	Protospacer
*******************.**********

40. spacer 1.3|5386|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to MT178766 (Listeria virus P100plus, complete genome) position: , mismatch: 1, identity: 0.967

cctttgtttagtttgtttatctatctaact	CRISPR spacer
cctttgtttagtttgtttacctatctaact	Protospacer
*******************.**********

41. spacer 1.3|5386|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NC_047872 (Listeria phage LMTA-94, complete genome) position: , mismatch: 1, identity: 0.967

cctttgtttagtttgtttatctatctaact	CRISPR spacer
cctttgtttagtttgtttacctatctaact	Protospacer
*******************.**********

42. spacer 1.3|5386|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to MT178767 (Listeria virus P200, complete genome) position: , mismatch: 1, identity: 0.967

cctttgtttagtttgtttatctatctaact	CRISPR spacer
cctttgtttagtttgtttacctatctaact	Protospacer
*******************.**********

43. spacer 1.3|5386|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to DQ004855 (Listeria bacteriophage P100, complete genome) position: , mismatch: 1, identity: 0.967

cctttgtttagtttgtttatctatctaact	CRISPR spacer
cctttgtttagtttgtttacctatctaact	Protospacer
*******************.**********

44. spacer 1.3|5386|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to KJ591605 (Listeria phage LMTA-57, complete genome) position: , mismatch: 1, identity: 0.967

cctttgtttagtttgtttatctatctaact	CRISPR spacer
cctttgtttagtttgtttacctatctaact	Protospacer
*******************.**********

45. spacer 1.3|5386|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to MN128594 (Listeria phage LP-066, complete genome) position: , mismatch: 1, identity: 0.967

cctttgtttagtttgtttatctatctaact	CRISPR spacer
cctttatttagtttgtttatctatctaact	Protospacer
*****.************************

46. spacer 1.3|5386|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NC_042048 (Listeria phage LMTA-34, complete genome) position: , mismatch: 1, identity: 0.967

cctttgtttagtttgtttatctatctaact	CRISPR spacer
cctttgtttagtttgtttacctatctaact	Protospacer
*******************.**********

47. spacer 1.3|5386|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to KJ668717 (Listeria phage LMTA-34 hypothetical proteins, transposase domain-containing protein, and hypothetical proteins genes, complete cds) position: , mismatch: 1, identity: 0.967

cctttgtttagtttgtttatctatctaact	CRISPR spacer
cctttatttagtttgtttatctatctaact	Protospacer
*****.************************

48. spacer 1.3|5386|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NC_041862 (Listeria phage LP-064, complete genome) position: , mismatch: 1, identity: 0.967

cctttgtttagtttgtttatctatctaact	CRISPR spacer
cctttgtttagtttgtttacctatctaact	Protospacer
*******************.**********

49. spacer 1.3|5386|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to KJ094030 (Listeria phage LP-083-2, complete genome) position: , mismatch: 1, identity: 0.967

cctttgtttagtttgtttatctatctaact	CRISPR spacer
cctttatttagtttgtttatctatctaact	Protospacer
*****.************************

50. spacer 1.3|5386|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to JX126918 (Listeria phage LP-125, complete genome) position: , mismatch: 1, identity: 0.967

cctttgtttagtttgtttatctatctaact	CRISPR spacer
cctttgtttagtttgtttacctatctaact	Protospacer
*******************.**********

51. spacer 1.3|5386|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NC_024360 (Listeria phage LMSP-25, complete genome) position: , mismatch: 1, identity: 0.967

cctttgtttagtttgtttatctatctaact	CRISPR spacer
cctttgtttagtttgtttacctatctaact	Protospacer
*******************.**********

52. spacer 1.3|5386|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to KJ535721 (Listeria phage List-36, complete genome) position: , mismatch: 1, identity: 0.967

cctttgtttagtttgtttatctatctaact	CRISPR spacer
cctttgtttagtttgtttatccatctaact	Protospacer
*********************.********

53. spacer 1.3|5386|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to KJ094031 (Listeria phage LP-124, complete genome) position: , mismatch: 1, identity: 0.967

cctttgtttagtttgtttatctatctaact	CRISPR spacer
cctttatttagtttgtttatctatctaact	Protospacer
*****.************************

54. spacer 1.4|5452|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NC_003216 (Listeria phage A118, complete genome) position: , mismatch: 1, identity: 0.967

aacaagaaaaaagatccagacaatattgca	CRISPR spacer
aacaagaaaaaagacccagacaatattgca	Protospacer
**************.***************

55. spacer 1.4|5452|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to AJ242593 (Bacteriophage A118 complete genome) position: , mismatch: 1, identity: 0.967

aacaagaaaaaagatccagacaatattgca	CRISPR spacer
aacaagaaaaaagacccagacaatattgca	Protospacer
**************.***************

56. spacer 1.4|5452|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to DQ003642 (Listeria phage A006, complete genome) position: , mismatch: 1, identity: 0.967

aacaagaaaaaagatccagacaatattgca	CRISPR spacer
aacaagaaaaaagacccagacaatattgca	Protospacer
**************.***************

57. spacer 1.5|5518|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to KJ094023 (Listeria phage LP-101, complete genome) position: , mismatch: 1, identity: 0.967

gctgttgcaacatgatcaaaaaaattattt	CRISPR spacer
gctgtcgcaacatgatcaaaaaaattattt	Protospacer
*****.************************

58. spacer 1.6|5584|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to MT500540 (Listeria phage LP-HM00113468, complete genome) position: , mismatch: 1, identity: 0.967

taagcgtaatattaatgtcaaagcttctag	CRISPR spacer
taagggtaatattaatgtcaaagcttctag	Protospacer
**** *************************

59. spacer 1.14|6113|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT,PILER-CR matches to MH341453 (Listeria phage PSU-VKH-LP041, complete genome) position: , mismatch: 1, identity: 0.967

gtgtttctttcccaccttctggttcaacgc	CRISPR spacer
gtgtttctttcccaccttccggttcaacgc	Protospacer
*******************.**********

60. spacer 1.24|6773|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT,PILER-CR matches to MH299806 (Listeria phage LP-KV022, complete genome) position: , mismatch: 1, identity: 0.967

cctttggaggaactgaatttactggcacta	CRISPR spacer
catttggaggaactgaatttactggcacta	Protospacer
* ****************************

61. spacer 1.24|6773|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT,PILER-CR matches to MN114083 (Listeria phage LP-013, complete genome) position: , mismatch: 1, identity: 0.967

cctttggaggaactgaatttactggcacta	CRISPR spacer
catttggaggaactgaatttactggcacta	Protospacer
* ****************************

62. spacer 1.24|6773|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT,PILER-CR matches to NC_021785 (Listeria phage LP-110, complete genome) position: , mismatch: 1, identity: 0.967

cctttggaggaactgaatttactggcacta	CRISPR spacer
catttggaggaactgaatttactggcacta	Protospacer
* ****************************

63. spacer 1.24|6773|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT,PILER-CR matches to KJ094026 (Listeria phage LP-032 contig 3, partial genome) position: , mismatch: 1, identity: 0.967

cctttggaggaactgaatttactggcacta	CRISPR spacer
catttggaggaactgaatttactggcacta	Protospacer
* ****************************

64. spacer 1.24|6773|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT,PILER-CR matches to MN128593 (Listeria phage LP-031, complete genome) position: , mismatch: 1, identity: 0.967

cctttggaggaactgaatttactggcacta	CRISPR spacer
catttggaggaactgaatttactggcacta	Protospacer
* ****************************

65. spacer 1.24|6773|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT,PILER-CR matches to NC_021787 (Listeria phage LP-037, complete genome) position: , mismatch: 1, identity: 0.967

cctttggaggaactgaatttactggcacta	CRISPR spacer
catttggaggaactgaatttactggcacta	Protospacer
* ****************************

66. spacer 1.24|6773|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT,PILER-CR matches to MN904502 (Listeria phage LP-018, complete genome) position: , mismatch: 1, identity: 0.967

cctttggaggaactgaatttactggcacta	CRISPR spacer
catttggaggaactgaatttactggcacta	Protospacer
* ****************************

67. spacer 1.24|6773|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT,PILER-CR matches to JX442241 (Listeria phage P70, complete genome) position: , mismatch: 1, identity: 0.967

cctttggaggaactgaatttactggcacta	CRISPR spacer
catttggaggaactgaatttactggcacta	Protospacer
* ****************************

68. spacer 1.24|6773|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT,PILER-CR matches to KJ094020 (Listeria phage LP-026, complete genome) position: , mismatch: 1, identity: 0.967

cctttggaggaactgaatttactggcacta	CRISPR spacer
catttggaggaactgaatttactggcacta	Protospacer
* ****************************

69. spacer 1.24|6773|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT,PILER-CR matches to KJ094021 (Listeria phage LP-114, complete genome) position: , mismatch: 1, identity: 0.967

cctttggaggaactgaatttactggcacta	CRISPR spacer
catttggaggaactgaatttactggcacta	Protospacer
* ****************************

70. spacer 1.24|6773|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT,PILER-CR matches to MN114082 (Listeria phage LP-010, complete genome) position: , mismatch: 1, identity: 0.967

cctttggaggaactgaatttactggcacta	CRISPR spacer
catttggaggaactgaatttactggcacta	Protospacer
* ****************************

71. spacer 1.27|6971|31|NZ_JNGJ01000024|CRISPRCasFinder,CRT,PILER-CR matches to NC_009812 (Listeria phage B025, complete genome) position: , mismatch: 1, identity: 0.968

attcgtgaatgccgacaatcgttcatttcca	CRISPR spacer
atccgtgaatgccgacaatcgttcatttcca	Protospacer
**.****************************

72. spacer 1.28|7038|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NZ_LR134403 (Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence) position: , mismatch: 1, identity: 0.967

ggtgaggtaaatcaatataaagatgcatta	CRISPR spacer
ggcgaggtaaatcaatataaagatgcatta	Protospacer
**.***************************

73. spacer 1.28|7038|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to MT500540 (Listeria phage LP-HM00113468, complete genome) position: , mismatch: 1, identity: 0.967

ggtgaggtaaatcaatataaagatgcatta	CRISPR spacer
ggcgaggtaaatcaatataaagatgcatta	Protospacer
**.***************************

74. spacer 1.28|7038|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to KJ094023 (Listeria phage LP-101, complete genome) position: , mismatch: 1, identity: 0.967

ggtgaggtaaatcaatataaagatgcatta	CRISPR spacer
ggcgaggtaaatcaatataaagatgcatta	Protospacer
**.***************************

75. spacer 1.29|7104|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NZ_LR134403 (Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence) position: , mismatch: 1, identity: 0.967

tcgtccactctagtagcatctaggtctagg	CRISPR spacer
tcgtccactctagtagcatctagatctagg	Protospacer
***********************.******

76. spacer 1.29|7104|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to KJ094023 (Listeria phage LP-101, complete genome) position: , mismatch: 1, identity: 0.967

tcgtccactctagtagcatctaggtctagg	CRISPR spacer
tcgtccactctagtagcatctagatctagg	Protospacer
***********************.******

77. spacer 1.33|7104|29|NZ_JNGJ01000024|PILER-CR matches to NZ_LR134403 (Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence) position: , mismatch: 1, identity: 0.966

tcgtccactctagtagcatctaggtctag	CRISPR spacer
tcgtccactctagtagcatctagatctag	Protospacer
***********************.*****

78. spacer 1.33|7104|29|NZ_JNGJ01000024|PILER-CR matches to KJ094023 (Listeria phage LP-101, complete genome) position: , mismatch: 1, identity: 0.966

tcgtccactctagtagcatctaggtctag	CRISPR spacer
tcgtccactctagtagcatctagatctag	Protospacer
***********************.*****

79. spacer 1.1|5254|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to DQ003637 (Listeria phage A500, complete genome) position: , mismatch: 2, identity: 0.933

caagttaaagatatcaactacattcagaca	CRISPR spacer
caagttgaagatattaactacattcagaca	Protospacer
******.*******.***************

80. spacer 1.1|5254|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to KJ094022 (Listeria phage LP-030-3, complete genome) position: , mismatch: 2, identity: 0.933

caagttaaagatatcaactacattcagaca	CRISPR spacer
caagttgaagatattaactacattcagaca	Protospacer
******.*******.***************

81. spacer 1.4|5452|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to MH341451 (Listeria phage PSU-VKH-LP019, complete genome) position: , mismatch: 2, identity: 0.933

aacaagaaaaaagatccagacaatattgca	CRISPR spacer
aacaagaaaaaagatccagacaatgtcgca	Protospacer
************************.*.***

82. spacer 1.16|6245|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT,PILER-CR matches to KJ094023 (Listeria phage LP-101, complete genome) position: , mismatch: 2, identity: 0.933

aacacaccgagcaatagaaatacactgtta	CRISPR spacer
agcacaccgagcaatagaaatatactgtta	Protospacer
*.********************.*******

83. spacer 1.24|6773|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT,PILER-CR matches to JB137888 (Sequence 7 from Patent WO2012159774) position: , mismatch: 2, identity: 0.933

cctttggaggaactgaatttactggcacta	CRISPR spacer
catttgggggaactgaatttactggcacta	Protospacer
* *****.**********************

84. spacer 1.27|6971|31|NZ_JNGJ01000024|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR134403 (Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence) position: , mismatch: 2, identity: 0.935

attcgtgaatgccgacaatcgttcatttcca	CRISPR spacer
atccgtgaatgctgacaatcgttcatttcca	Protospacer
**.*********.******************

85. spacer 1.26|6905|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT,PILER-CR matches to KJ094027 (Listeria phage LP-083-1 contig 1, partial genome) position: , mismatch: 3, identity: 0.9

ttgttgtcgtcgggtagttcgcccatatct	CRISPR spacer
ctattgtcgtcgggtagttcacccatatct	Protospacer
.*.*****************.*********

86. spacer 1.26|6905|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT,PILER-CR matches to DQ003641 (Listeria phage P35, complete genome) position: , mismatch: 3, identity: 0.9

ttgttgtcgtcgggtagttcgcccatatct	CRISPR spacer
ctattgtcgtcgggtagttcacccatatct	Protospacer
.*.*****************.*********

87. spacer 1.28|7038|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to MH319731 (Marine virus AG-345-E02 Ga0172268_11 genomic sequence) position: , mismatch: 5, identity: 0.833

ggtgaggtaaatcaatataaagatgcatta	CRISPR spacer
ggtggagtaaatcaatataaagatagaata	Protospacer
****..******************. * **

88. spacer 1.28|7038|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to HQ632825 (Prochlorococcus phage P-SSM5 genomic sequence) position: , mismatch: 5, identity: 0.833

ggtgaggtaaatcaatataaagatgcatta	CRISPR spacer
ggtggagtaaatcaatataaagatagaata	Protospacer
****..******************. * **

89. spacer 1.28|7038|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to AY939844 (Prochlorococcus phage P-SSM2, complete genome) position: , mismatch: 5, identity: 0.833

ggtgaggtaaatcaatataaagatgcatta	CRISPR spacer
ggtggagtaaatcaatataaagatagaata	Protospacer
****..******************. * **

90. spacer 1.3|5386|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NC_018265 (Melissococcus plutonius DAT561 plasmid 1, complete sequence) position: , mismatch: 6, identity: 0.8

cctttgtttagtttgtttatctatctaact	CRISPR spacer
caattgtttagtttgtttatttatttaata	Protospacer
*  *****************.***.***.

91. spacer 1.3|5386|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NZ_CP006684 (Melissococcus plutonius S1 plasmid pMEPL_178, complete sequence) position: , mismatch: 6, identity: 0.8

cctttgtttagtttgtttatctatctaact	CRISPR spacer
caattgtttagtttgtttatttatttaata	Protospacer
*  *****************.***.***.

92. spacer 1.3|5386|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NZ_AP021886 (Melissococcus plutonius strain DAT1033 plasmid pMP1, complete sequence) position: , mismatch: 6, identity: 0.8

cctttgtttagtttgtttatctatctaact	CRISPR spacer
caattgtttagtttgtttatttatttaata	Protospacer
*  *****************.***.***.

93. spacer 1.3|5386|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NZ_AP018525 (Melissococcus plutonius strain DAT585 plasmid pMP1, complete sequence) position: , mismatch: 6, identity: 0.8

cctttgtttagtttgtttatctatctaact	CRISPR spacer
caattgtttagtttgtttatttatttaata	Protospacer
*  *****************.***.***.

94. spacer 1.5|5518|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NC_025830 (Escherichia phage Av-05, complete genome) position: , mismatch: 6, identity: 0.8

-gctgttgcaacatgatcaaaaaaattattt	CRISPR spacer
aattgat-caacatgattagaaaaattattt	Protospacer
 ..** * *********.*.***********

95. spacer 1.6|5584|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NZ_CP044539 (Borrelia sp. CA690 plasmid cp26, complete sequence) position: , mismatch: 6, identity: 0.8

taagcgtaa--tattaatgtcaaagcttctag	CRISPR spacer
--agctacatttattaatgtcaatgcttctag	Protospacer
  ***   *  ************ ********

96. spacer 1.7|5650|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NZ_CP024448 (Moraxella osloensis strain NP7 plasmid pNP7-5, complete sequence) position: , mismatch: 6, identity: 0.8

tgatggatgacatttctaagcaaataacta	CRISPR spacer
tgatgggtaacatttctaagcaaatacggg	Protospacer
******.*.*****************   .

97. spacer 1.10|5848|31|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to MW057856 (Providencia phage PSTCR4, complete genome) position: , mismatch: 6, identity: 0.806

ttcagactatgttttcaacaaagggatgcta	CRISPR spacer
ttctacctatgttttctacaaaaggatgcaa	Protospacer
*** . ********** *****.****** *

98. spacer 1.12|5981|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT,PILER-CR matches to MF351863 (Synechococcus phage Bellamy, complete genome) position: , mismatch: 6, identity: 0.8

tcatagtctgttggaacatctgc---atgaact	CRISPR spacer
tcatagtctgttggaacatcttccaagtaa---	Protospacer
********************* *   .*.*

99. spacer 1.28|7038|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to MN694096 (Marine virus AFVG_250M214, complete genome) position: , mismatch: 6, identity: 0.8

ggtgaggtaaatcaatataaagatgcatta	CRISPR spacer
gcaaatgaaaatgaatataaagatgcatta	Protospacer
*  .* * **** *****************

100. spacer 1.28|7038|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to MN694078 (Marine virus AFVG_250M213, complete genome) position: , mismatch: 6, identity: 0.8

ggtgaggtaaatcaatataaagatgcatta	CRISPR spacer
gcaaatgaaaatgaatataaagatgcatta	Protospacer
*  .* * **** *****************

101. spacer 1.28|7038|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to MN693931 (Marine virus AFVG_250M215, complete genome) position: , mismatch: 6, identity: 0.8

ggtgaggtaaatcaatataaagatgcatta	CRISPR spacer
gcaaatgaaaatgaatataaagatgcatta	Protospacer
*  .* * **** *****************

102. spacer 1.28|7038|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NC_029057 (Vibrio phage qdvp001, partial genome) position: , mismatch: 6, identity: 0.8

ggtgaggtaaatcaatataaaga-tgcatta	CRISPR spacer
gcagatgtaaatcaatataaagattgtgtt-	Protospacer
*  ** ***************** **..**

103. spacer 1.30|7170|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NC_014660 (Acinetobacter phage Ac42, complete genome) position: , mismatch: 6, identity: 0.8

gtcatttttaatagtttcaattgctgataa	CRISPR spacer
ctcctagttaataattacaattgctgataa	Protospacer
 ** *  ******.** *************

104. spacer 1.34|7170|29|NZ_JNGJ01000024|PILER-CR matches to NZ_CP025427 (Enterococcus faecium strain SC4 plasmid p2, complete sequence) position: , mismatch: 6, identity: 0.793

gtcatttttaatagtttcaattgctgata	CRISPR spacer
atcgtttttaatagattcaattgcttctt	Protospacer
.**.********** **********  *

105. spacer 1.34|7170|29|NZ_JNGJ01000024|PILER-CR matches to NZ_CP041263 (Enterococcus faecium strain VVEswe-R plasmid pVVEswe-R2) position: , mismatch: 6, identity: 0.793

gtcatttttaatagtttcaattgctgata	CRISPR spacer
atcgtttttaatagattcaattgcttctt	Protospacer
.**.********** **********  *

106. spacer 1.34|7170|29|NZ_JNGJ01000024|PILER-CR matches to NZ_CP027511 (Enterococcus faecium strain AUSMDU00004055 plasmid unnamed5, complete sequence) position: , mismatch: 6, identity: 0.793

gtcatttttaatagtttcaattgctgata	CRISPR spacer
atcgtttttaatagattcaattgcttctt	Protospacer
.**.********** **********  *

107. spacer 1.34|7170|29|NZ_JNGJ01000024|PILER-CR matches to NZ_LR135332 (Enterococcus faecium isolate E7471 plasmid 2) position: , mismatch: 6, identity: 0.793

gtcatttttaatagtttcaattgctgata	CRISPR spacer
atcgtttttaatagattcaattgcttctt	Protospacer
.**.********** **********  *

108. spacer 1.34|7170|29|NZ_JNGJ01000024|PILER-CR matches to NZ_LR135332 (Enterococcus faecium isolate E7471 plasmid 2) position: , mismatch: 6, identity: 0.793

gtcatttttaatagtttcaattgctgata	CRISPR spacer
atcgtttttaatagattcaattgcttctt	Protospacer
.**.********** **********  *

109. spacer 1.34|7170|29|NZ_JNGJ01000024|PILER-CR matches to NZ_LR135245 (Enterococcus faecium isolate E6988 plasmid 3) position: , mismatch: 6, identity: 0.793

gtcatttttaatagtttcaattgctgata	CRISPR spacer
atcgtttttaatagattcaattgcttctt	Protospacer
.**.********** **********  *

110. spacer 1.34|7170|29|NZ_JNGJ01000024|PILER-CR matches to NZ_LR135245 (Enterococcus faecium isolate E6988 plasmid 3) position: , mismatch: 6, identity: 0.793

gtcatttttaatagtttcaattgctgata	CRISPR spacer
atcgtttttaatagattcaattgcttctt	Protospacer
.**.********** **********  *

111. spacer 1.34|7170|29|NZ_JNGJ01000024|PILER-CR matches to NZ_LR135256 (Enterococcus faecium isolate E7098 plasmid 3) position: , mismatch: 6, identity: 0.793

gtcatttttaatagtttcaattgctgata	CRISPR spacer
atcgtttttaatagattcaattgcttctt	Protospacer
.**.********** **********  *

112. spacer 1.34|7170|29|NZ_JNGJ01000024|PILER-CR matches to NZ_CP038997 (Enterococcus faecium strain SRR24 plasmid pSRR24) position: , mismatch: 6, identity: 0.793

gtcatttttaatagtttcaattgctgata	CRISPR spacer
atcgtttttaatagattcaattgcttctt	Protospacer
.**.********** **********  *

113. spacer 1.34|7170|29|NZ_JNGJ01000024|PILER-CR matches to NZ_CP019989 (Enterococcus faecium isolate 2014-VREF-63 plasmid p63-1, complete sequence) position: , mismatch: 6, identity: 0.793

gtcatttttaatagtttcaattgctgata	CRISPR spacer
atcgtttttaatagattcaattgcttctt	Protospacer
.**.********** **********  *

114. spacer 1.34|7170|29|NZ_JNGJ01000024|PILER-CR matches to NZ_CP044266 (Enterococcus faecium strain V1836 plasmid pHVH-V1836-2, complete sequence) position: , mismatch: 6, identity: 0.793

gtcatttttaatagtttcaattgctgata	CRISPR spacer
atcgtttttaatagattcaattgcttctt	Protospacer
.**.********** **********  *

115. spacer 1.34|7170|29|NZ_JNGJ01000024|PILER-CR matches to NZ_LR134107 (Enterococcus faecium isolate E6043 plasmid 3) position: , mismatch: 6, identity: 0.793

gtcatttttaatagtttcaattgctgata	CRISPR spacer
atcgtttttaatagattcaattgcttctt	Protospacer
.**.********** **********  *

116. spacer 1.34|7170|29|NZ_JNGJ01000024|PILER-CR matches to NZ_LR134107 (Enterococcus faecium isolate E6043 plasmid 3) position: , mismatch: 6, identity: 0.793

gtcatttttaatagtttcaattgctgata	CRISPR spacer
atcgtttttaatagattcaattgcttctt	Protospacer
.**.********** **********  *

117. spacer 1.34|7170|29|NZ_JNGJ01000024|PILER-CR matches to NZ_CP045014 (Enterococcus faecium strain LAC7.2 plasmid pII, complete sequence) position: , mismatch: 6, identity: 0.793

gtcatttttaatagtttcaattgctgata	CRISPR spacer
atcgtttttaatagattcaattgcttctt	Protospacer
.**.********** **********  *

118. spacer 1.34|7170|29|NZ_JNGJ01000024|PILER-CR matches to NZ_CP040742 (Enterococcus faecium strain VRE1 plasmid pVRE1-VanA, complete sequence) position: , mismatch: 6, identity: 0.793

gtcatttttaatagtttcaattgctgata	CRISPR spacer
atcgtttttaatagattcaattgcttctt	Protospacer
.**.********** **********  *

119. spacer 1.34|7170|29|NZ_JNGJ01000024|PILER-CR matches to MN831413 (Enterococcus faecium strain M17/0314 plasmid pM17/0314, complete sequence) position: , mismatch: 6, identity: 0.793

gtcatttttaatagtttcaattgctgata	CRISPR spacer
atcgtttttaatagattcaattgcttctt	Protospacer
.**.********** **********  *

120. spacer 1.34|7170|29|NZ_JNGJ01000024|PILER-CR matches to NZ_AP022343 (Enterococcus faecium strain KUHS13 plasmid pELF2) position: , mismatch: 6, identity: 0.793

gtcatttttaatagtttcaattgctgata	CRISPR spacer
atcgtttttaatagattcaattgcttctt	Protospacer
.**.********** **********  *

121. spacer 1.34|7170|29|NZ_JNGJ01000024|PILER-CR matches to NZ_CP041272 (Enterococcus faecium strain VVEswe-S plasmid pVVEswe-S2) position: , mismatch: 6, identity: 0.793

gtcatttttaatagtttcaattgctgata	CRISPR spacer
atcgtttttaatagattcaattgcttctt	Protospacer
.**.********** **********  *

122. spacer 1.34|7170|29|NZ_JNGJ01000024|PILER-CR matches to NZ_CP019994 (Enterococcus faecium isolate 2014-VREF-268 plasmid p268-2) position: , mismatch: 6, identity: 0.793

gtcatttttaatagtttcaattgctgata	CRISPR spacer
atcgtttttaatagattcaattgcttctt	Protospacer
.**.********** **********  *

123. spacer 1.34|7170|29|NZ_JNGJ01000024|PILER-CR matches to NZ_CP035656 (Enterococcus faecium strain UAMSEF_09 plasmid unnamed2) position: , mismatch: 6, identity: 0.793

gtcatttttaatagtttcaattgctgata	CRISPR spacer
atcgtttttaatagattcaattgcttctt	Protospacer
.**.********** **********  *

124. spacer 1.34|7170|29|NZ_JNGJ01000024|PILER-CR matches to NZ_CP035662 (Enterococcus faecium strain UAMSEF_20 plasmid unnamed2) position: , mismatch: 6, identity: 0.793

gtcatttttaatagtttcaattgctgata	CRISPR spacer
atcgtttttaatagattcaattgcttctt	Protospacer
.**.********** **********  *

125. spacer 1.34|7170|29|NZ_JNGJ01000024|PILER-CR matches to NZ_CP039730 (Enterococcus faecium strain ZY2 plasmid pZY2) position: , mismatch: 6, identity: 0.793

gtcatttttaatagtttcaattgctgata	CRISPR spacer
atcgtttttaatagattcaattgcttctt	Protospacer
.**.********** **********  *

126. spacer 1.34|7170|29|NZ_JNGJ01000024|PILER-CR matches to NZ_CP019971 (Enterococcus faecium isolate 2014-VREF-114 plasmid p114-1 sequence) position: , mismatch: 6, identity: 0.793

gtcatttttaatagtttcaattgctgata	CRISPR spacer
atcgtttttaatagattcaattgcttctt	Protospacer
.**.********** **********  *

127. spacer 1.34|7170|29|NZ_JNGJ01000024|PILER-CR matches to NZ_CP040238 (Enterococcus faecium strain VB3025 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.793

gtcatttttaatagtttcaattgctgata	CRISPR spacer
atcgtttttaatagattcaattgcttctt	Protospacer
.**.********** **********  *

128. spacer 1.34|7170|29|NZ_JNGJ01000024|PILER-CR matches to NZ_CP012462 (Enterococcus faecium strain ISMMS_VRE_7 plasmid ISMMS_VRE7_p2) position: , mismatch: 6, identity: 0.793

gtcatttttaatagtttcaattgctgata	CRISPR spacer
atcgtttttaatagattcaattgcttctt	Protospacer
.**.********** **********  *

129. spacer 1.34|7170|29|NZ_JNGJ01000024|PILER-CR matches to NZ_MG640601 (Enterococcus faecium strain SRR6 plasmid pEMSRR6, complete sequence) position: , mismatch: 6, identity: 0.793

gtcatttttaatagtttcaattgctgata	CRISPR spacer
atcgtttttaatagattcaattgcttctt	Protospacer
.**.********** **********  *

130. spacer 1.34|7170|29|NZ_JNGJ01000024|PILER-CR matches to NZ_LR214986 (Mycoplasma cynos strain NCTC10142 plasmid 13) position: , mismatch: 6, identity: 0.793

gtcatttttaatagtttcaattgctgata	CRISPR spacer
aacttttttaattgtttcaattgctgttt	Protospacer
. * ******** ************* *

131. spacer 1.34|7170|29|NZ_JNGJ01000024|PILER-CR matches to NZ_LT598665 (Enterococcus faecium isolate Ef_aus00233 plasmid 3) position: , mismatch: 6, identity: 0.793

gtcatttttaatagtttcaattgctgata	CRISPR spacer
atcgtttttaatagattcaattgcttctt	Protospacer
.**.********** **********  *

132. spacer 1.34|7170|29|NZ_JNGJ01000024|PILER-CR matches to NC_018965 (Staphylococcus aureus plasmid SAP077A, complete sequence) position: , mismatch: 6, identity: 0.793

gtcatttttaatagtttcaattgctgata	CRISPR spacer
ctcatttttgatagtttcagttgcagctt	Protospacer
 ********.*********.**** * *

133. spacer 1.34|7170|29|NZ_JNGJ01000024|PILER-CR matches to NC_019009 (Staphylococcus aureus plasmid SAP078A, complete sequence) position: , mismatch: 6, identity: 0.793

gtcatttttaatagtttcaattgctgata	CRISPR spacer
ctcatttttgatagtttcagttgcagctt	Protospacer
 ********.*********.**** * *

134. spacer 1.34|7170|29|NZ_JNGJ01000024|PILER-CR matches to NZ_CP026065 (Staphylococcus aureus strain FDAARGOS_19 plasmid unnamed) position: , mismatch: 6, identity: 0.793

gtcatttttaatagtttcaattgctgata	CRISPR spacer
ctcatttttgatagtttcagttgcagctt	Protospacer
 ********.*********.**** * *

135. spacer 1.34|7170|29|NZ_JNGJ01000024|PILER-CR matches to NC_013340 (Staphylococcus aureus plasmid SAP076A, complete sequence) position: , mismatch: 6, identity: 0.793

gtcatttttaatagtttcaattgctgata	CRISPR spacer
ctcatttttgatagtttcagttgcagctt	Protospacer
 ********.*********.**** * *

136. spacer 1.34|7170|29|NZ_JNGJ01000024|PILER-CR matches to NC_014535 (Gloeothece verrucosa PCC 7822 plasmid Cy782206, complete sequence) position: , mismatch: 6, identity: 0.793

gtcatttttaatagtttcaattgctgata	CRISPR spacer
gacatttttaatagtttctaatgcttctt	Protospacer
* **************** * ****  *

137. spacer 1.34|7170|29|NZ_JNGJ01000024|PILER-CR matches to NZ_CP010104 (Francisella tularensis subsp. novicida strain DPG 3A-IS plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.793

gtcatttttaatagtttcaattgctgata	CRISPR spacer
gctttgtttaatattatcaattgctgata	Protospacer
*.. * ******* * *************

138. spacer 1.34|7170|29|NZ_JNGJ01000024|PILER-CR matches to NZ_CP010104 (Francisella tularensis subsp. novicida strain DPG 3A-IS plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.793

gtcatttttaatagtttcaattgctgata	CRISPR spacer
gctttgtttaatattatcaattgctgata	Protospacer
*.. * ******* * *************

139. spacer 1.34|7170|29|NZ_JNGJ01000024|PILER-CR matches to NZ_CP028469 (Staphylococcus aureus strain IT1-S plasmid pIT1-S, complete sequence) position: , mismatch: 6, identity: 0.793

gtcatttttaatagtttcaattgctgata	CRISPR spacer
ctcatttttgatagtttcagttgcagctt	Protospacer
 ********.*********.**** * *

140. spacer 1.34|7170|29|NZ_JNGJ01000024|PILER-CR matches to MN694237 (Marine virus AFVG_250M414, complete genome) position: , mismatch: 6, identity: 0.793

gtcatttttaatagtttcaattgctgata	CRISPR spacer
ttcatttttaaatgtttcaattgcaccta	Protospacer
 **********  ***********   **

141. spacer 1.34|7170|29|NZ_JNGJ01000024|PILER-CR matches to MT028491 (Ochrobactrum phage vB_OspM_OC, complete genome) position: , mismatch: 6, identity: 0.793

gtcatttttaatagtttcaattgctgata	CRISPR spacer
gccattttcaatagcttcaattgctactg	Protospacer
*.******.*****.**********. *.

142. spacer 1.34|7170|29|NZ_JNGJ01000024|PILER-CR matches to MN694607 (Marine virus AFVG_250M465, complete genome) position: , mismatch: 6, identity: 0.793

gtcatttttaatagtttcaattgctgata	CRISPR spacer
ttcatttttaaatgtttcaattgcaccta	Protospacer
 **********  ***********   **

143. spacer 1.34|7170|29|NZ_JNGJ01000024|PILER-CR matches to MN508817 (Yersinia phage JC221, partial genome) position: , mismatch: 6, identity: 0.793

gtcatttttaatagtttcaattgctgata	CRISPR spacer
atctgttttaatagtttcatttgcttatt	Protospacer
.**  ************** ***** **

144. spacer 1.34|7170|29|NZ_JNGJ01000024|PILER-CR matches to MN694635 (Marine virus AFVG_250M372, complete genome) position: , mismatch: 6, identity: 0.793

gtcatttttaatagtttcaattgctgata	CRISPR spacer
ttcatttttaaatgtttcaattgcaccta	Protospacer
 **********  ***********   **

145. spacer 1.35|7236|29|NZ_JNGJ01000024|PILER-CR matches to NZ_CP024940 (Paraburkholderia hospita strain mHSR1 plasmid pmHSR1_P, complete sequence) position: , mismatch: 6, identity: 0.793

tcaaaagcgcgcatgaggaagaaatcacg	CRISPR spacer
gcgtgagcgcgcacgaggaagaaatcccg	Protospacer
 *. .********.************ **

146. spacer 1.35|7236|29|NZ_JNGJ01000024|PILER-CR matches to NZ_CP039899 (Agrobacterium tumefaciens strain CFBP5877 plasmid pAtCFBP5877a, complete sequence) position: , mismatch: 6, identity: 0.793

tcaaaagcgcgcatgaggaagaaatcacg	CRISPR spacer
tgcaaagcgcgcttgaggaagaaagctgg	Protospacer
*  ********* *********** *  *

147. spacer 1.35|7236|29|NZ_JNGJ01000024|PILER-CR matches to NZ_CP039890 (Agrobacterium tumefaciens strain CFBP5499 plasmid pAtCFBP5499a, complete sequence) position: , mismatch: 6, identity: 0.793

tcaaaagcgcgcatgaggaagaaatcacg	CRISPR spacer
tgcaaagcgcgcttgaggaagaaagctgg	Protospacer
*  ********* *********** *  *

148. spacer 1.1|5254|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to KT878766 (Staphylococcus phage P1105, complete genome) position: , mismatch: 7, identity: 0.767

caagttaaagatatcaactacattcagaca	CRISPR spacer
caagttaaagatatgaacaacataccaatt	Protospacer
************** *** **** * .*.

149. spacer 1.1|5254|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NC_025460 (Staphylococcus phage phiSa119, complete genome) position: , mismatch: 7, identity: 0.767

caagttaaagatatcaactacattcagaca	CRISPR spacer
caagttaaagatatgaacaacataccaatt	Protospacer
************** *** **** * .*.

150. spacer 1.5|5518|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to MN693453 (Marine virus AFVG_25M364, complete genome) position: , mismatch: 7, identity: 0.767

--gctgttgcaacatgatcaaaaaaattattt	CRISPR spacer
caaccat--caacatgctcaataaaattattt	Protospacer
  .*..*  ******* **** **********

151. spacer 1.13|6047|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR134421 (Legionella adelaidensis strain NCTC12735 genome assembly, plasmid: 12) position: , mismatch: 7, identity: 0.767

ttcccagccgtaatagatactaaattacca	CRISPR spacer
tcaattgccgaaatagttactaaattacca	Protospacer
*.  . **** ***** *************

152. spacer 1.14|6113|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT,PILER-CR matches to NC_048855 (Phage NBEco002, complete genome) position: , mismatch: 7, identity: 0.767

gtgtttctttcccaccttctggttcaacgc	CRISPR spacer
aagtagcttttccagcttctggttcaacga	Protospacer
. **  ****.*** **************

153. spacer 1.14|6113|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT,PILER-CR matches to NC_017969 (Escherichia phage bV_EcoS_AKFV33, complete genome) position: , mismatch: 7, identity: 0.767

gtgtttctttcccaccttctggttcaacgc	CRISPR spacer
aagtagcttttccagcttctggttcaacga	Protospacer
. **  ****.*** **************

154. spacer 1.14|6113|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT,PILER-CR matches to NC_024139 (Escherichia phage vB_EcoS_FFH1, complete genome) position: , mismatch: 7, identity: 0.767

gtgtttctttcccaccttctggttcaacgc	CRISPR spacer
aagtagcttttccagcttctggttcaacga	Protospacer
. **  ****.*** **************

155. spacer 1.14|6113|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT,PILER-CR matches to MN022787 (Salmonella virus VSe12, complete genome) position: , mismatch: 7, identity: 0.767

gtgtttctttcccaccttctggttcaacgc	CRISPR spacer
aagtagcttttccagcttctggttcaacga	Protospacer
. **  ****.*** **************

156. spacer 1.15|6179|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT,PILER-CR matches to MT521992 (Rhodococcus phage NiceHouse, complete genome) position: , mismatch: 7, identity: 0.767

gctgcctcgctttactcttcgttatctcca	CRISPR spacer
aatacctctctttactcttctttatcttta	Protospacer
. *.**** *********** ******..*

157. spacer 1.18|6377|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP045385 (Ruegeria sp. THAF33 plasmid pTHAF33_a, complete sequence) position: , mismatch: 7, identity: 0.767

gaaaaagttgtcgatcttacaaaaaaattc	CRISPR spacer
aaaaaagatgtcgatcttaccaaaatctct	Protospacer
.****** ************ ****  *..

158. spacer 1.24|6773|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029234 (Sinorhizobium fredii CCBAU 45436 plasmid pSF45436d, complete sequence) position: , mismatch: 7, identity: 0.767

cctttggaggaactgaatttactggcacta	CRISPR spacer
tcgacgcaggaacagaatttgctggcacta	Protospacer
.*  .* ****** ******.*********

159. spacer 1.28|7038|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NC_015223 (Nitrosomonas sp. AL212 plasmid pNAL21201, complete sequence) position: , mismatch: 7, identity: 0.767

ggtgaggtaaatcaatataaagatgcatta	CRISPR spacer
cgttaggtaaatcaatataaaggtttcgta	Protospacer
 ** ******************.* .  **

160. spacer 1.30|7170|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NZ_CP025427 (Enterococcus faecium strain SC4 plasmid p2, complete sequence) position: , mismatch: 7, identity: 0.767

gtcatttttaatagtttcaattgctgataa	CRISPR spacer
atcgtttttaatagattcaattgcttcttg	Protospacer
.**.********** **********  * .

161. spacer 1.30|7170|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NZ_CP041263 (Enterococcus faecium strain VVEswe-R plasmid pVVEswe-R2) position: , mismatch: 7, identity: 0.767

gtcatttttaatagtttcaattgctgataa	CRISPR spacer
atcgtttttaatagattcaattgcttcttg	Protospacer
.**.********** **********  * .

162. spacer 1.30|7170|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NZ_CP027511 (Enterococcus faecium strain AUSMDU00004055 plasmid unnamed5, complete sequence) position: , mismatch: 7, identity: 0.767

gtcatttttaatagtttcaattgctgataa	CRISPR spacer
atcgtttttaatagattcaattgcttcttg	Protospacer
.**.********** **********  * .

163. spacer 1.30|7170|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NZ_LR135332 (Enterococcus faecium isolate E7471 plasmid 2) position: , mismatch: 7, identity: 0.767

gtcatttttaatagtttcaattgctgataa	CRISPR spacer
atcgtttttaatagattcaattgcttcttg	Protospacer
.**.********** **********  * .

164. spacer 1.30|7170|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NZ_LR135332 (Enterococcus faecium isolate E7471 plasmid 2) position: , mismatch: 7, identity: 0.767

gtcatttttaatagtttcaattgctgataa	CRISPR spacer
atcgtttttaatagattcaattgcttcttg	Protospacer
.**.********** **********  * .

165. spacer 1.30|7170|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NZ_LR135245 (Enterococcus faecium isolate E6988 plasmid 3) position: , mismatch: 7, identity: 0.767

gtcatttttaatagtttcaattgctgataa	CRISPR spacer
atcgtttttaatagattcaattgcttcttg	Protospacer
.**.********** **********  * .

166. spacer 1.30|7170|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NZ_LR135245 (Enterococcus faecium isolate E6988 plasmid 3) position: , mismatch: 7, identity: 0.767

gtcatttttaatagtttcaattgctgataa	CRISPR spacer
atcgtttttaatagattcaattgcttcttg	Protospacer
.**.********** **********  * .

167. spacer 1.30|7170|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NZ_LR135256 (Enterococcus faecium isolate E7098 plasmid 3) position: , mismatch: 7, identity: 0.767

gtcatttttaatagtttcaattgctgataa	CRISPR spacer
atcgtttttaatagattcaattgcttcttg	Protospacer
.**.********** **********  * .

168. spacer 1.30|7170|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NZ_CP038997 (Enterococcus faecium strain SRR24 plasmid pSRR24) position: , mismatch: 7, identity: 0.767

gtcatttttaatagtttcaattgctgataa	CRISPR spacer
atcgtttttaatagattcaattgcttcttg	Protospacer
.**.********** **********  * .

169. spacer 1.30|7170|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NZ_CP019989 (Enterococcus faecium isolate 2014-VREF-63 plasmid p63-1, complete sequence) position: , mismatch: 7, identity: 0.767

gtcatttttaatagtttcaattgctgataa	CRISPR spacer
atcgtttttaatagattcaattgcttcttg	Protospacer
.**.********** **********  * .

170. spacer 1.30|7170|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NZ_CP044266 (Enterococcus faecium strain V1836 plasmid pHVH-V1836-2, complete sequence) position: , mismatch: 7, identity: 0.767

gtcatttttaatagtttcaattgctgataa	CRISPR spacer
atcgtttttaatagattcaattgcttcttg	Protospacer
.**.********** **********  * .

171. spacer 1.30|7170|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NZ_LR134107 (Enterococcus faecium isolate E6043 plasmid 3) position: , mismatch: 7, identity: 0.767

gtcatttttaatagtttcaattgctgataa	CRISPR spacer
atcgtttttaatagattcaattgcttcttg	Protospacer
.**.********** **********  * .

172. spacer 1.30|7170|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NZ_LR134107 (Enterococcus faecium isolate E6043 plasmid 3) position: , mismatch: 7, identity: 0.767

gtcatttttaatagtttcaattgctgataa	CRISPR spacer
atcgtttttaatagattcaattgcttcttg	Protospacer
.**.********** **********  * .

173. spacer 1.30|7170|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NC_010371 (Finegoldia magna ATCC 29328 plasmid pFMC, complete sequence) position: , mismatch: 7, identity: 0.767

gtcatttttaatagtttcaattgctgataa	CRISPR spacer
tttgggtttaataaattcaattgctgataa	Protospacer
 *..  *******. ***************

174. spacer 1.30|7170|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NZ_CP045014 (Enterococcus faecium strain LAC7.2 plasmid pII, complete sequence) position: , mismatch: 7, identity: 0.767

gtcatttttaatagtttcaattgctgataa	CRISPR spacer
atcgtttttaatagattcaattgcttcttg	Protospacer
.**.********** **********  * .

175. spacer 1.30|7170|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NZ_CP040742 (Enterococcus faecium strain VRE1 plasmid pVRE1-VanA, complete sequence) position: , mismatch: 7, identity: 0.767

gtcatttttaatagtttcaattgctgataa	CRISPR spacer
atcgtttttaatagattcaattgcttcttg	Protospacer
.**.********** **********  * .

176. spacer 1.30|7170|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to MN831413 (Enterococcus faecium strain M17/0314 plasmid pM17/0314, complete sequence) position: , mismatch: 7, identity: 0.767

gtcatttttaatagtttcaattgctgataa	CRISPR spacer
atcgtttttaatagattcaattgcttcttg	Protospacer
.**.********** **********  * .

177. spacer 1.30|7170|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NZ_AP022343 (Enterococcus faecium strain KUHS13 plasmid pELF2) position: , mismatch: 7, identity: 0.767

gtcatttttaatagtttcaattgctgataa	CRISPR spacer
atcgtttttaatagattcaattgcttcttg	Protospacer
.**.********** **********  * .

178. spacer 1.30|7170|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NZ_CP041272 (Enterococcus faecium strain VVEswe-S plasmid pVVEswe-S2) position: , mismatch: 7, identity: 0.767

gtcatttttaatagtttcaattgctgataa	CRISPR spacer
atcgtttttaatagattcaattgcttcttg	Protospacer
.**.********** **********  * .

179. spacer 1.30|7170|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NZ_CP019994 (Enterococcus faecium isolate 2014-VREF-268 plasmid p268-2) position: , mismatch: 7, identity: 0.767

gtcatttttaatagtttcaattgctgataa	CRISPR spacer
atcgtttttaatagattcaattgcttcttg	Protospacer
.**.********** **********  * .

180. spacer 1.30|7170|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NZ_CP035656 (Enterococcus faecium strain UAMSEF_09 plasmid unnamed2) position: , mismatch: 7, identity: 0.767

gtcatttttaatagtttcaattgctgataa	CRISPR spacer
atcgtttttaatagattcaattgcttcttg	Protospacer
.**.********** **********  * .

181. spacer 1.30|7170|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NZ_CP035662 (Enterococcus faecium strain UAMSEF_20 plasmid unnamed2) position: , mismatch: 7, identity: 0.767

gtcatttttaatagtttcaattgctgataa	CRISPR spacer
atcgtttttaatagattcaattgcttcttg	Protospacer
.**.********** **********  * .

182. spacer 1.30|7170|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NZ_CP039730 (Enterococcus faecium strain ZY2 plasmid pZY2) position: , mismatch: 7, identity: 0.767

gtcatttttaatagtttcaattgctgataa	CRISPR spacer
atcgtttttaatagattcaattgcttcttg	Protospacer
.**.********** **********  * .

183. spacer 1.30|7170|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NZ_CP019971 (Enterococcus faecium isolate 2014-VREF-114 plasmid p114-1 sequence) position: , mismatch: 7, identity: 0.767

gtcatttttaatagtttcaattgctgataa	CRISPR spacer
atcgtttttaatagattcaattgcttcttg	Protospacer
.**.********** **********  * .

184. spacer 1.30|7170|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NZ_CP040238 (Enterococcus faecium strain VB3025 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.767

gtcatttttaatagtttcaattgctgataa	CRISPR spacer
atcgtttttaatagattcaattgcttcttg	Protospacer
.**.********** **********  * .

185. spacer 1.30|7170|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NZ_CP012462 (Enterococcus faecium strain ISMMS_VRE_7 plasmid ISMMS_VRE7_p2) position: , mismatch: 7, identity: 0.767

gtcatttttaatagtttcaattgctgataa	CRISPR spacer
atcgtttttaatagattcaattgcttcttg	Protospacer
.**.********** **********  * .

186. spacer 1.30|7170|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NZ_MG640601 (Enterococcus faecium strain SRR6 plasmid pEMSRR6, complete sequence) position: , mismatch: 7, identity: 0.767

gtcatttttaatagtttcaattgctgataa	CRISPR spacer
atcgtttttaatagattcaattgcttcttg	Protospacer
.**.********** **********  * .

187. spacer 1.30|7170|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NZ_LR214986 (Mycoplasma cynos strain NCTC10142 plasmid 13) position: , mismatch: 7, identity: 0.767

gtcatttttaatagtttcaattgctgataa	CRISPR spacer
aacttttttaattgtttcaattgctgtttt	Protospacer
. * ******** ************* *

188. spacer 1.30|7170|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NZ_LT598665 (Enterococcus faecium isolate Ef_aus00233 plasmid 3) position: , mismatch: 7, identity: 0.767

gtcatttttaatagtttcaattgctgataa	CRISPR spacer
atcgtttttaatagattcaattgcttcttg	Protospacer
.**.********** **********  * .

189. spacer 1.30|7170|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NC_018965 (Staphylococcus aureus plasmid SAP077A, complete sequence) position: , mismatch: 7, identity: 0.767

gtcatttttaatagtttcaattgctgataa	CRISPR spacer
ctcatttttgatagtttcagttgcagcttt	Protospacer
 ********.*********.**** * *

190. spacer 1.30|7170|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NC_019009 (Staphylococcus aureus plasmid SAP078A, complete sequence) position: , mismatch: 7, identity: 0.767

gtcatttttaatagtttcaattgctgataa	CRISPR spacer
ctcatttttgatagtttcagttgcagcttt	Protospacer
 ********.*********.**** * *

191. spacer 1.30|7170|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NZ_CP026065 (Staphylococcus aureus strain FDAARGOS_19 plasmid unnamed) position: , mismatch: 7, identity: 0.767

gtcatttttaatagtttcaattgctgataa	CRISPR spacer
ctcatttttgatagtttcagttgcagcttt	Protospacer
 ********.*********.**** * *

192. spacer 1.30|7170|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NC_013340 (Staphylococcus aureus plasmid SAP076A, complete sequence) position: , mismatch: 7, identity: 0.767

gtcatttttaatagtttcaattgctgataa	CRISPR spacer
ctcatttttgatagtttcagttgcagcttt	Protospacer
 ********.*********.**** * *

193. spacer 1.30|7170|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NC_014535 (Gloeothece verrucosa PCC 7822 plasmid Cy782206, complete sequence) position: , mismatch: 7, identity: 0.767

gtcatttttaatagtttcaattgctgataa	CRISPR spacer
gacatttttaatagtttctaatgcttcttt	Protospacer
* **************** * ****  *

194. spacer 1.30|7170|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NZ_CP010104 (Francisella tularensis subsp. novicida strain DPG 3A-IS plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.767

gtcatttttaatagtttcaattgctgataa	CRISPR spacer
gctttgtttaatattatcaattgctgatag	Protospacer
*.. * ******* * *************.

195. spacer 1.30|7170|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NZ_CP010104 (Francisella tularensis subsp. novicida strain DPG 3A-IS plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.767

gtcatttttaatagtttcaattgctgataa	CRISPR spacer
gctttgtttaatattatcaattgctgatag	Protospacer
*.. * ******* * *************.

196. spacer 1.30|7170|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NZ_CP028469 (Staphylococcus aureus strain IT1-S plasmid pIT1-S, complete sequence) position: , mismatch: 7, identity: 0.767

gtcatttttaatagtttcaattgctgataa	CRISPR spacer
ctcatttttgatagtttcagttgcagcttt	Protospacer
 ********.*********.**** * *

197. spacer 1.30|7170|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to MN694237 (Marine virus AFVG_250M414, complete genome) position: , mismatch: 7, identity: 0.767

gtcatttttaatagtttcaattgctgataa	CRISPR spacer
ttcatttttaaatgtttcaattgcacctat	Protospacer
 **********  ***********   **

198. spacer 1.30|7170|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to MT028491 (Ochrobactrum phage vB_OspM_OC, complete genome) position: , mismatch: 7, identity: 0.767

gtcatttttaatagtttcaattgctgataa	CRISPR spacer
gccattttcaatagcttcaattgctactgt	Protospacer
*.******.*****.**********. *.

199. spacer 1.30|7170|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to MN694607 (Marine virus AFVG_250M465, complete genome) position: , mismatch: 7, identity: 0.767

gtcatttttaatagtttcaattgctgataa	CRISPR spacer
ttcatttttaaatgtttcaattgcacctat	Protospacer
 **********  ***********   **

200. spacer 1.30|7170|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to MN508817 (Yersinia phage JC221, partial genome) position: , mismatch: 7, identity: 0.767

gtcatttttaatagtttcaattgctgataa	CRISPR spacer
atctgttttaatagtttcatttgcttattc	Protospacer
.**  ************** ***** **

201. spacer 1.30|7170|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to MN694635 (Marine virus AFVG_250M372, complete genome) position: , mismatch: 7, identity: 0.767

gtcatttttaatagtttcaattgctgataa	CRISPR spacer
ttcatttttaaatgtttcaattgcacctat	Protospacer
 **********  ***********   **

202. spacer 1.31|7236|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NZ_CP024940 (Paraburkholderia hospita strain mHSR1 plasmid pmHSR1_P, complete sequence) position: , mismatch: 7, identity: 0.767

tcaaaagcgcgcatgaggaagaaatcacga	CRISPR spacer
gcgtgagcgcgcacgaggaagaaatcccgc	Protospacer
 *. .********.************ **

203. spacer 1.31|7236|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NZ_CP039899 (Agrobacterium tumefaciens strain CFBP5877 plasmid pAtCFBP5877a, complete sequence) position: , mismatch: 7, identity: 0.767

tcaaaagcgcgcatgaggaagaaatcacga	CRISPR spacer
tgcaaagcgcgcttgaggaagaaagctggc	Protospacer
*  ********* *********** *  *

204. spacer 1.31|7236|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NZ_CP039890 (Agrobacterium tumefaciens strain CFBP5499 plasmid pAtCFBP5499a, complete sequence) position: , mismatch: 7, identity: 0.767

tcaaaagcgcgcatgaggaagaaatcacga	CRISPR spacer
tgcaaagcgcgcttgaggaagaaagctggc	Protospacer
*  ********* *********** *  *

205. spacer 1.34|7170|29|NZ_JNGJ01000024|PILER-CR matches to NZ_LR214939 (Mycoplasma salivarium strain NCTC10113 plasmid 2) position: , mismatch: 7, identity: 0.759

gtcatttttaatagtttcaattgctgata	CRISPR spacer
ttcattgttaataatttcaattgctttat	Protospacer
 ***** ******.***********

206. spacer 1.34|7170|29|NZ_JNGJ01000024|PILER-CR matches to NC_010371 (Finegoldia magna ATCC 29328 plasmid pFMC, complete sequence) position: , mismatch: 7, identity: 0.759

gtcatttttaatagtttcaattgctgata	CRISPR spacer
tttgggtttaataaattcaattgctgata	Protospacer
 *..  *******. **************

207. spacer 1.34|7170|29|NZ_JNGJ01000024|PILER-CR matches to NZ_CP011490 (Staphylococcus pseudintermedius strain 222 plasmid p222, complete sequence) position: , mismatch: 7, identity: 0.759

gtcatttttaatagtttcaattgctgata	CRISPR spacer
taaagtttttataatttcaattgctgatt	Protospacer
   * **** ***.**************

208. spacer 1.35|7236|29|NZ_JNGJ01000024|PILER-CR matches to NZ_CP040759 (Paracoccus sp. 2251 plasmid unnamed8, complete sequence) position: , mismatch: 7, identity: 0.759

tcaaaagcgcgcatgaggaagaaatcacg	CRISPR spacer
ccgtcggcgcccatgaggaagcaatcacg	Protospacer
.*.  .**** ********** *******

209. spacer 1.1|5254|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to JN638751 (Bacillus phage G, complete genome) position: , mismatch: 8, identity: 0.733

caagttaaagatatcaactacattcagaca	CRISPR spacer
aaagttaaaggtatcaactacaaggattta	Protospacer
 *********.***********   *  .*

210. spacer 1.3|5386|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to KF771238 (Escherichia phage bV_EcoS_AHS24, complete genome) position: , mismatch: 8, identity: 0.733

cctttgtttagtttgtttatctatctaact	CRISPR spacer
tgtttgttttgtttgtttatcgatctcgtc	Protospacer
. ******* *********** **** ...

211. spacer 1.3|5386|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to KF771236 (Escherichia phage bV_EcoS_AHP24, complete genome) position: , mismatch: 8, identity: 0.733

cctttgtttagtttgtttatctatctaact	CRISPR spacer
tgtttgttttgtttgtttatcgatctcgtc	Protospacer
. ******* *********** **** ...

212. spacer 1.3|5386|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NZ_CP017832 (Butyrivibrio hungatei strain MB2003 plasmid pNP144, complete sequence) position: , mismatch: 8, identity: 0.733

cctttgtttagtttgtttatctatctaact	CRISPR spacer
tttttgtttagtctgtttatccatccgttt	Protospacer
..**********.********.***.. .*

213. spacer 1.3|5386|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to MN693012 (Marine virus AFVG_117M3, complete genome) position: , mismatch: 8, identity: 0.733

cctttgtttagtttgtttatctatctaact	CRISPR spacer
tctttgtttagttagtttatttattctttt	Protospacer
.************ ******.***..  .*

214. spacer 1.3|5386|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NC_007581 (Clostridium phage c-st, complete genome) position: , mismatch: 8, identity: 0.733

cctttgtttagtttgtttatctatctaact	CRISPR spacer
tctttgtttaatttgtttatctgtaaatag	Protospacer
.*********.***********.*  *

215. spacer 1.3|5386|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to AP008983 (Clostridium phage c-st genomic DNA, complete genome) position: , mismatch: 8, identity: 0.733

cctttgtttagtttgtttatctatctaact	CRISPR spacer
tctttgtttaatttgtttatctgtaaatag	Protospacer
.*********.***********.*  *

216. spacer 1.4|5452|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to MT932211 (Escherichia phage VEcB, complete genome) position: , mismatch: 8, identity: 0.733

aacaagaaaaaagatccagacaatattgca	CRISPR spacer
cagaagaaaaaagatcctgacaataagatc	Protospacer
 * ************** *******  ..

217. spacer 1.4|5452|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to MN850573 (Escherichia phage muut, complete genome) position: , mismatch: 8, identity: 0.733

aacaagaaaaaagatccagacaatattgca	CRISPR spacer
cagaagaaaaaagatcctgacaataagatc	Protospacer
 * ************** *******  ..

218. spacer 1.4|5452|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to MN850601 (Escherichia phage inny, complete genome) position: , mismatch: 8, identity: 0.733

aacaagaaaaaagatccagacaatattgca	CRISPR spacer
cagaagaaaaaagatcctgacaataagatc	Protospacer
 * ************** *******  ..

219. spacer 1.4|5452|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to FR775895 (Enterobacteria phage phi92, complete genome) position: , mismatch: 8, identity: 0.733

aacaagaaaaaagatccagacaatattgca	CRISPR spacer
cagaagaaaaaagatcctgacaataagatc	Protospacer
 * ************** *******  ..

220. spacer 1.4|5452|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to MN850632 (Escherichia phage alia, complete genome) position: , mismatch: 8, identity: 0.733

aacaagaaaaaagatccagacaatattgca	CRISPR spacer
cagaagaaaaaagatcctgacaataagatc	Protospacer
 * ************** *******  ..

221. spacer 1.5|5518|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to AP014255 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S25-C160, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 8, identity: 0.733

gctgttgcaacatgatcaaaaaaattattt	CRISPR spacer
agctcagcaacataatcaaaaaaataattt	Protospacer
. . . *******.*********** ****

222. spacer 1.5|5518|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to MT349887 (Acinetobacter phage 5W, complete genome) position: , mismatch: 8, identity: 0.733

gctgttgcaacatgatcaaaaaaattattt	CRISPR spacer
gctgttgcaacccgatcaaaaaatcggatg	Protospacer
*********** .********** . . *

223. spacer 1.23|6707|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013462 (Burkholderia ubonensis strain MSMB1471WGS plasmid pMSMB1471, complete sequence) position: , mismatch: 8, identity: 0.733

gcgcttcccatcgatttaaacgcatttaca	CRISPR spacer
gtcgcgtccaacgatttaaacgcatttacc	Protospacer
*.  . .*** ******************

224. spacer 1.26|6905|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT,PILER-CR matches to AP018399 (Xanthomonas phage XacN1 DNA, complete genome) position: , mismatch: 8, identity: 0.733

ttgttgtcgtcgggtagttcgcccatatct	CRISPR spacer
ccgttgtcgtcggtcagttcgcccagcttg	Protospacer
..*********** .**********  *.

225. spacer 1.26|6905|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT,PILER-CR matches to AP018399 (Xanthomonas phage XacN1 DNA, complete genome) position: , mismatch: 8, identity: 0.733

ttgttgtcgtcgggtagttcgcccatatct	CRISPR spacer
ccgttgtcgtcggtcagttcgcccagcttg	Protospacer
..*********** .**********  *.

226. spacer 1.28|7038|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NC_010379 (Clostridium botulinum B1 str. Okra plasmid pCLD, complete sequence) position: , mismatch: 8, identity: 0.733

ggtgaggtaaatcaatataaagatgcatta	CRISPR spacer
aaacatataaatcaatataatgttgcatta	Protospacer
..  * .************* * *******

227. spacer 1.28|7038|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to MN692983 (Marine virus AFVG_117M11, complete genome) position: , mismatch: 8, identity: 0.733

ggtgaggtaaatcaatataaagatgcatta	CRISPR spacer
tccaaagttaatcaatataaagatgcaatg	Protospacer
  ..*.** ****************** *.

228. spacer 1.30|7170|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NZ_LR214939 (Mycoplasma salivarium strain NCTC10113 plasmid 2) position: , mismatch: 8, identity: 0.733

gtcatttttaatagtttcaattgctgataa	CRISPR spacer
ttcattgttaataatttcaattgctttatg	Protospacer
 ***** ******.***********    .

229. spacer 1.30|7170|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NZ_CP035176 (Lactobacillus plantarum strain SRCM103426 plasmid unnamed2) position: , mismatch: 8, identity: 0.733

gtcatttttaatagtttcaattgctgataa	CRISPR spacer
actatttttaatagttgcaattgccataaa	Protospacer
...************* *******..  **

230. spacer 1.30|7170|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NZ_CP035115 (Lactobacillus plantarum strain SRCM103295 plasmid unnamed2) position: , mismatch: 8, identity: 0.733

gtcatttttaatagtttcaattgctgataa	CRISPR spacer
actatttttaatagttgcaattgccataaa	Protospacer
...************* *******..  **

231. spacer 1.30|7170|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NZ_CP035567 (Lactobacillus plantarum strain SRCM103300 plasmid unnamed1) position: , mismatch: 8, identity: 0.733

gtcatttttaatagtttcaattgctgataa	CRISPR spacer
actatttttaatagttgcaattgccataaa	Protospacer
...************* *******..  **

232. spacer 1.30|7170|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NZ_CP025417 (Lactobacillus plantarum strain X7021 plasmid unnamed5, complete sequence) position: , mismatch: 8, identity: 0.733

gtcatttttaatagtttcaattgctgataa	CRISPR spacer
actatttttaatagttgcaattgccataaa	Protospacer
...************* *******..  **

233. spacer 1.30|7170|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NC_021519 (Lactobacillus plantarum 16 plasmid Lp16H, complete sequence) position: , mismatch: 8, identity: 0.733

gtcatttttaatagtttcaattgctgataa	CRISPR spacer
actatttttaatagttgcaattgccataaa	Protospacer
...************* *******..  **

234. spacer 1.30|7170|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NZ_CP046661 (Lactobacillus plantarum strain 83-18 plasmid p83-18.1, complete sequence) position: , mismatch: 8, identity: 0.733

gtcatttttaatagtttcaattgctgataa	CRISPR spacer
actatttttaatagttgcaattgccataaa	Protospacer
...************* *******..  **

235. spacer 1.30|7170|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NZ_CP046662 (Lactobacillus plantarum strain 83-18 plasmid p83-18.2, complete sequence) position: , mismatch: 8, identity: 0.733

gtcatttttaatagtttcaattgctgataa	CRISPR spacer
actatttttaatagttgcaattgccataaa	Protospacer
...************* *******..  **

236. spacer 1.30|7170|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NZ_CP050809 (Lactobacillus plantarum strain SPC-SNU 72-2 plasmid pLBP443, complete sequence) position: , mismatch: 8, identity: 0.733

gtcatttttaatagtttcaattgctgataa	CRISPR spacer
actatttttaatagttgcaattgccataaa	Protospacer
...************* *******..  **

237. spacer 1.30|7170|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NZ_CP011490 (Staphylococcus pseudintermedius strain 222 plasmid p222, complete sequence) position: , mismatch: 8, identity: 0.733

gtcatttttaatagtttcaattgctgataa	CRISPR spacer
taaagtttttataatttcaattgctgattt	Protospacer
   * **** ***.**************

238. spacer 1.31|7236|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NZ_CP040759 (Paracoccus sp. 2251 plasmid unnamed8, complete sequence) position: , mismatch: 8, identity: 0.733

tcaaaagcgcgcatgaggaagaaatcacga	CRISPR spacer
ccgtcggcgcccatgaggaagcaatcacgg	Protospacer
.*.  .**** ********** *******.

239. spacer 1.34|7170|29|NZ_JNGJ01000024|PILER-CR matches to NZ_CP020426 (Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.724

gtcatttttaatagtttcaattgctgata	CRISPR spacer
agcatttttaatagcttctattgctctat	Protospacer
. ************.*** ******

240. spacer 1.34|7170|29|NZ_JNGJ01000024|PILER-CR matches to NZ_CP035176 (Lactobacillus plantarum strain SRCM103426 plasmid unnamed2) position: , mismatch: 8, identity: 0.724

gtcatttttaatagtttcaattgctgata	CRISPR spacer
actatttttaatagttgcaattgccataa	Protospacer
...************* *******..  *

241. spacer 1.34|7170|29|NZ_JNGJ01000024|PILER-CR matches to NZ_CP035115 (Lactobacillus plantarum strain SRCM103295 plasmid unnamed2) position: , mismatch: 8, identity: 0.724

gtcatttttaatagtttcaattgctgata	CRISPR spacer
actatttttaatagttgcaattgccataa	Protospacer
...************* *******..  *

242. spacer 1.34|7170|29|NZ_JNGJ01000024|PILER-CR matches to NZ_CP035567 (Lactobacillus plantarum strain SRCM103300 plasmid unnamed1) position: , mismatch: 8, identity: 0.724

gtcatttttaatagtttcaattgctgata	CRISPR spacer
actatttttaatagttgcaattgccataa	Protospacer
...************* *******..  *

243. spacer 1.34|7170|29|NZ_JNGJ01000024|PILER-CR matches to NZ_CP025417 (Lactobacillus plantarum strain X7021 plasmid unnamed5, complete sequence) position: , mismatch: 8, identity: 0.724

gtcatttttaatagtttcaattgctgata	CRISPR spacer
actatttttaatagttgcaattgccataa	Protospacer
...************* *******..  *

244. spacer 1.34|7170|29|NZ_JNGJ01000024|PILER-CR matches to NC_021519 (Lactobacillus plantarum 16 plasmid Lp16H, complete sequence) position: , mismatch: 8, identity: 0.724

gtcatttttaatagtttcaattgctgata	CRISPR spacer
actatttttaatagttgcaattgccataa	Protospacer
...************* *******..  *

245. spacer 1.34|7170|29|NZ_JNGJ01000024|PILER-CR matches to NZ_CP046661 (Lactobacillus plantarum strain 83-18 plasmid p83-18.1, complete sequence) position: , mismatch: 8, identity: 0.724

gtcatttttaatagtttcaattgctgata	CRISPR spacer
actatttttaatagttgcaattgccataa	Protospacer
...************* *******..  *

246. spacer 1.34|7170|29|NZ_JNGJ01000024|PILER-CR matches to NZ_CP046662 (Lactobacillus plantarum strain 83-18 plasmid p83-18.2, complete sequence) position: , mismatch: 8, identity: 0.724

gtcatttttaatagtttcaattgctgata	CRISPR spacer
actatttttaatagttgcaattgccataa	Protospacer
...************* *******..  *

247. spacer 1.34|7170|29|NZ_JNGJ01000024|PILER-CR matches to NZ_CP050809 (Lactobacillus plantarum strain SPC-SNU 72-2 plasmid pLBP443, complete sequence) position: , mismatch: 8, identity: 0.724

gtcatttttaatagtttcaattgctgata	CRISPR spacer
actatttttaatagttgcaattgccataa	Protospacer
...************* *******..  *

248. spacer 1.34|7170|29|NZ_JNGJ01000024|PILER-CR matches to MF547663 (Clostridioides phage LIBA2945, complete genome) position: , mismatch: 8, identity: 0.724

gtcatttttaatagtttcaattgctgata	CRISPR spacer
agcatttttaatagcttctattgctctat	Protospacer
. ************.*** ******

249. spacer 1.34|7170|29|NZ_JNGJ01000024|PILER-CR matches to CP011970 (Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence) position: , mismatch: 8, identity: 0.724

gtcatttttaatagtttcaattgctgata	CRISPR spacer
agcatttttaatagcttctattgctctat	Protospacer
. ************.*** ******

250. spacer 1.34|7170|29|NZ_JNGJ01000024|PILER-CR matches to LN681537 (Clostridium phage phiCD211, complete genome) position: , mismatch: 8, identity: 0.724

gtcatttttaatagtttcaattgctgata	CRISPR spacer
agcatttttaatagcttctattgctctat	Protospacer
. ************.*** ******

251. spacer 1.3|5386|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to MN694632 (Marine virus AFVG_250M389, complete genome) position: , mismatch: 9, identity: 0.7

cctttgtttagtttgtttatctatctaact	CRISPR spacer
agtttctttagtttgtttatctaatgcaaa	Protospacer
  *** ***************** .  *

252. spacer 1.23|6707|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT,PILER-CR matches to MW057858 (Providencia phage PSTCR6, complete genome) position: , mismatch: 9, identity: 0.7

gcgcttcccatcgatttaaacgcatttaca	CRISPR spacer
aaatgtcccatcgatttaaacgcaattctc	Protospacer
. .. ******************* ** .

253. spacer 1.26|6905|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT,PILER-CR matches to JN106164 (Uncultured bacterium plasmid pAKD1, complete sequence) position: , mismatch: 9, identity: 0.7

ttgttgtcgtcgggtagttcgcccatatct	CRISPR spacer
ggcaggctgtcgggcagttcgcccatatcc	Protospacer
     *..******.**************.

254. spacer 1.27|6971|31|NZ_JNGJ01000024|CRISPRCasFinder,CRT,PILER-CR matches to CP045557 (Citrobacter sp. S39 plasmid pS39-2, complete sequence) position: , mismatch: 9, identity: 0.71

attcgtgaatgccgacaatcgttcatttcca	CRISPR spacer
aagcgtgaatgccgacaatagtccatcattt	Protospacer
*  **************** **.***. ..

255. spacer 1.30|7170|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NZ_CP020426 (Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.7

gtcatttttaatagtttcaattgctgataa	CRISPR spacer
agcatttttaatagcttctattgctctatc	Protospacer
. ************.*** ******

256. spacer 1.30|7170|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to MF547663 (Clostridioides phage LIBA2945, complete genome) position: , mismatch: 9, identity: 0.7

gtcatttttaatagtttcaattgctgataa	CRISPR spacer
agcatttttaatagcttctattgctctatc	Protospacer
. ************.*** ******

257. spacer 1.30|7170|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to CP011970 (Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence) position: , mismatch: 9, identity: 0.7

gtcatttttaatagtttcaattgctgataa	CRISPR spacer
agcatttttaatagcttctattgctctatc	Protospacer
. ************.*** ******

258. spacer 1.30|7170|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to LN681537 (Clostridium phage phiCD211, complete genome) position: , mismatch: 9, identity: 0.7

gtcatttttaatagtttcaattgctgataa	CRISPR spacer
agcatttttaatagcttctattgctctatc	Protospacer
. ************.*** ******

259. spacer 1.19|6443|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR594660 (Variovorax sp. PBL-H6 plasmid 2) position: , mismatch: 10, identity: 0.667

accaacggcgcgcaaaagaaaatcattaaa	CRISPR spacer
gccaagggcgcgcaaaagaaaaagcggggc	Protospacer
.**** ****************     ..

260. spacer 1.19|6443|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR594667 (Variovorax sp. SRS16 plasmid 2) position: , mismatch: 10, identity: 0.667

accaacggcgcgcaaaagaaaatcattaaa	CRISPR spacer
gccaagggcgcgcaaaagaaaaagcggggc	Protospacer
.**** ****************     ..

261. spacer 1.19|6443|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR594690 (Variovorax sp. WDL1 plasmid 2) position: , mismatch: 10, identity: 0.667

accaacggcgcgcaaaagaaaatcattaaa	CRISPR spacer
gccaagggcgcgcaaaagaaaaagcggggc	Protospacer
.**** ****************     ..

262. spacer 1.19|6443|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR594672 (Variovorax sp. PBL-E5 plasmid 2) position: , mismatch: 10, identity: 0.667

accaacggcgcgcaaaagaaaatcattaaa	CRISPR spacer
gccaagggcgcgcaaaagaaaaagcggggc	Protospacer
.**** ****************     ..

263. spacer 1.28|7038|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NZ_CP016361 (Bacillus cereus strain M13 plasmid pBCM1301, complete sequence) position: , mismatch: 10, identity: 0.667

ggtgaggtaaatcaatataaagatgcatta	CRISPR spacer
caaagaaaaaatctatataaagatgcattc	Protospacer
 . .... ***** ***************

264. spacer 1.28|7038|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NZ_KY940428 (UNVERIFIED: Bacillus sp. (in: Bacteria) strain PUMK-07 plasmid pMK-07, complete sequence) position: , mismatch: 10, identity: 0.667

ggtgaggtaaatcaatataaagatgcatta	CRISPR spacer
caaagaaaaaatctatataaagatgcattc	Protospacer
 . .... ***** ***************

265. spacer 1.28|7038|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NZ_CP009595 (Bacillus cereus strain 3a plasmid pBFC_3, complete sequence) position: , mismatch: 10, identity: 0.667

ggtgaggtaaatcaatataaagatgcatta	CRISPR spacer
caaagaaaaaatctatataaagatgcattc	Protospacer
 . .... ***** ***************

266. spacer 1.28|7038|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NC_011973 (Bacillus cereus Q1 plasmid pBc239, complete sequence) position: , mismatch: 10, identity: 0.667

ggtgaggtaaatcaatataaagatgcatta	CRISPR spacer
caaagaaaaaatctatataaagatgcattc	Protospacer
 . .... ***** ***************

267. spacer 1.28|7038|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NZ_CP016317 (Bacillus cereus strain M3 plasmid pBCM301, complete sequence) position: , mismatch: 10, identity: 0.667

ggtgaggtaaatcaatataaagatgcatta	CRISPR spacer
caaagaaaaaatctatataaagatgcattc	Protospacer
 . .... ***** ***************

268. spacer 1.28|7038|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NZ_CP047086 (Bacillus paranthracis strain BC307 plasmid pCE1, complete sequence) position: , mismatch: 10, identity: 0.667

ggtgaggtaaatcaatataaagatgcatta	CRISPR spacer
caaagaaaaaatctatataaagatgcattc	Protospacer
 . .... ***** ***************

269. spacer 1.28|7038|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NZ_CP009606 (Bacillus cereus strain S2-8 plasmid pBFR_2, complete sequence) position: , mismatch: 10, identity: 0.667

ggtgaggtaaatcaatataaagatgcatta	CRISPR spacer
caaagaaaaaatctatataaagatgcattc	Protospacer
 . .... ***** ***************

270. spacer 1.28|7038|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NZ_CP041978 (Bacillus pacificus strain NCCP 15909 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.667

ggtgaggtaaatcaatataaagatgcatta	CRISPR spacer
caaagaaaaaatctatataaagatgcattc	Protospacer
 . .... ***** ***************

271. spacer 1.28|7038|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NC_011655 (Bacillus cereus AH187 plasmid pAH187_270, complete sequence) position: , mismatch: 10, identity: 0.667

ggtgaggtaaatcaatataaagatgcatta	CRISPR spacer
caaagaaaaaatctatataaagatgcattc	Protospacer
 . .... ***** ***************

272. spacer 1.28|7038|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NC_010924 (Bacillus cereus strain AH187 plasmid pCER270, complete sequence) position: , mismatch: 10, identity: 0.667

ggtgaggtaaatcaatataaagatgcatta	CRISPR spacer
caaagaaaaaatctatataaagatgcattc	Protospacer
 . .... ***** ***************

273. spacer 1.28|7038|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NC_011777 (Bacillus cereus AH820 plasmid pAH820_272, complete sequence) position: , mismatch: 10, identity: 0.667

ggtgaggtaaatcaatataaagatgcatta	CRISPR spacer
caaagaaaaaatctatataaagatgcattc	Protospacer
 . .... ***** ***************

274. spacer 1.28|7038|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to CP045776 (Bacillus paranthracis strain CFSAN068816 plasmid p1CFSAN068816, complete sequence) position: , mismatch: 10, identity: 0.667

ggtgaggtaaatcaatataaagatgcatta	CRISPR spacer
caaagaaaaaatctatataaagatgcattc	Protospacer
 . .... ***** ***************

275. spacer 1.28|7038|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NZ_CP053994 (Bacillus cereus strain FDAARGOS_780 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.667

ggtgaggtaaatcaatataaagatgcatta	CRISPR spacer
caaagaaaaaatctatataaagatgcattc	Protospacer
 . .... ***** ***************

276. spacer 1.28|7038|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to CP041980 (Bacillus paranthracis strain NCCP 15910 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.667

ggtgaggtaaatcaatataaagatgcatta	CRISPR spacer
caaagaaaaaatctatataaagatgcattc	Protospacer
 . .... ***** ***************

277. spacer 1.28|7038|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NC_016792 (Bacillus cereus NC7401 plasmid pNCcld, complete sequence) position: , mismatch: 10, identity: 0.667

ggtgaggtaaatcaatataaagatgcatta	CRISPR spacer
caaagaaaaaatctatataaagatgcattc	Protospacer
 . .... ***** ***************

278. spacer 1.28|7038|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NZ_CP040343 (Bacillus cereus strain DLOU-Weihai plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.667

ggtgaggtaaatcaatataaagatgcatta	CRISPR spacer
caaagaaaaaatctatataaagatgcattc	Protospacer
 . .... ***** ***************

279. spacer 1.28|7038|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NZ_CP033789 (Bacillus sp. FDAARGOS_527 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.667

ggtgaggtaaatcaatataaagatgcatta	CRISPR spacer
caaagaaaaaatctatataaagatgcattc	Protospacer
 . .... ***** ***************

280. spacer 1.28|7038|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NZ_CP053992 (Bacillus cereus strain FDAARGOS_781 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.667

ggtgaggtaaatcaatataaagatgcatta	CRISPR spacer
caaagaaaaaatctatataaagatgcattc	Protospacer
 . .... ***** ***************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

163556 : 173588

Tupanvirus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014601215.1\|163556_165710_-	DNA topoisomerase III	A0A1X9I6W8	Streptococcus_phage	6.7e-44	34.1
WP_014601216.1\|165733_167506_-	DNA helicase RecQ	A0A2K9L3P7	Tupanvirus	1.1e-79	37.1
WP_003722118.1\|167666_169133_-	IMP dehydrogenase	A0A1V0SHK8	Klosneuvirus	8.0e-97	40.0
WP_003722119.1\|169418_169949_-	ADP-ribose-binding protein	A0A0K1L687	Scale_drop_disease_virus	2.6e-29	49.3
WP_014931037.1\|170006_171617_-	ABC-F family ATP-binding cassette domain-containing protein	A0A2K9L3Z8	Tupanvirus	7.5e-48	29.9
WP_003725314.1\|172133_173588_+	glycoside hydrolase family 1 protein	A0A0B5JD41	Pandoravirus	1.9e-50	30.3

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

4. NZ_JNGJ01000012

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

255 : 9088

Listeria_phage(70.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003733956.1\|255_432_+	hypothetical protein	Q9T198	Listeria_phage	6.3e-25	100.0
WP_003723292.1\|418_1018_+	N-acetyltransferase	Q9T197	Listeria_phage	1.0e-111	100.0
WP_012581438.1\|1090_1540_-	anti-CRISPR protein AcrIIA1	Q9T196	Listeria_phage	3.8e-74	97.3
WP_012581437.1\|1544_1895_-	AcrIIA2 family anti-CRISPR protein	Q9T195	Listeria_phage	1.2e-56	98.3
WP_012581436.1\|1926_2304_-	anti-CRISPR protein AcrIIA3	Q9T194	Listeria_phage	1.3e-67	99.2
WP_003727805.1\|2409_2619_-	hypothetical protein	A0A059T7Z0	Listeria_phage	1.9e-28	98.6
WP_012951563.1\|3059_3293_+	hypothetical protein	A8ATC5	Listeria_phage	1.6e-36	98.7
WP_014600783.1\|4037_5300_+	DUF1254 domain-containing protein	M1HNU9	Paramecium_bursaria_Chlorella_virus	1.7e-07	22.1
WP_009924171.1\|5341_5935_-	YdeI/OmpD-associated family protein	NA	NA	NA	NA
WP_009914084.1\|6088_6496_-	glyoxalase/bleomycin resistance/extradiol dioxygenase family protein	NA	NA	NA	NA
WP_014600785.1\|6660_7260_+	histidine phosphatase family protein	A0A1X9IGJ2	Lactococcus_phage	1.7e-29	40.5
WP_003723543.1\|7291_7552_-	hypothetical protein	NA	NA	NA	NA
WP_014600786.1\|7675_9088_+	ATP-dependent RNA helicase DbpA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	8.3e-51	31.8

DBSCAN-SWA_2

22438 : 81879

Bacillus_virus(15.79%)

protease,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014600789.1\|22438_23578_-\|protease	PrsW family intramembrane metalloprotease	NA	NA	NA	NA
WP_003723563.1\|23658_24054_-	helix-turn-helix transcriptional regulator	A9D9J6	Lactobacillus_prophage	1.3e-14	57.4
WP_003727524.1\|24204_24420_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_010989719.1\|24538_25072_+\|protease	matrixin family metalloprotease	NA	NA	NA	NA
WP_003732795.1\|25089_25755_+	hypothetical protein	NA	NA	NA	NA
WP_014600790.1\|26016_26955_+	hypothetical protein	NA	NA	NA	NA
WP_003723884.1\|27069_28353_+	trigger factor	NA	NA	NA	NA
WP_003723886.1\|28537_29797_+\|protease	ATP-dependent protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	1.4e-145	63.2
WP_009924620.1\|29915_30482_+	type I signal peptidase SipX	NA	NA	NA	NA
WP_009924619.1\|30516_31086_+	type I signal peptidase SipY	NA	NA	NA	NA
WP_003723889.1\|31187_31730_+	type I signal peptidase SipZ	NA	NA	NA	NA
WP_003723890.1\|31739_32603_+	ribosome biogenesis GTPase YlqF	NA	NA	NA	NA
WP_003723891.1\|32599_33385_+	ribonuclease HII	G4YAY0	Emiliania_huxleyi_virus	3.0e-26	39.2
WP_003723892.1\|33518_34379_+	DNA-protecting protein DprA	S6BFL3	Thermus_phage	1.2e-39	43.2
WP_014600791.1\|34650_36729_+	type I DNA topoisomerase	A0A1V0SB35	Catovirus	4.1e-107	37.5
WP_009924616.1\|36791_38096_+\|tRNA	FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO	NA	NA	NA	NA
WP_009911635.1\|38378_39281_+	tyrosine recombinase XerC	A0A1B1IQT7	uncultured_Mediterranean_phage	8.0e-23	28.0
WP_003724001.1\|39301_39841_+\|protease	ATP-dependent protease subunit HslV	NA	NA	NA	NA
WP_010989722.1\|39854_41264_+\|protease	ATP-dependent protease ATPase subunit HslU	A0A1B2IBU3	Erwinia_phage	5.2e-29	25.9
WP_003726695.1\|41284_42064_+	GTP-sensing pleiotropic transcriptional regulator CodY	NA	NA	NA	NA
WP_003724129.1\|42166_42586_+	acyl-CoA thioesterase	NA	NA	NA	NA
WP_003724130.1\|42607_42919_+	hypothetical protein	NA	NA	NA	NA
WP_009932949.1\|42921_43794_+	aldose 1-epimerase family protein	NA	NA	NA	NA
WP_014600792.1\|43835_44432_-	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA
WP_003732802.1\|44589_44997_+	CoA-binding protein	NA	NA	NA	NA
WP_003723731.1\|45177_47145_+	DNA topoisomerase IV subunit B	G3M9Z3	Bacillus_virus	6.7e-123	42.5
WP_010989723.1\|47141_49601_+	DNA topoisomerase IV subunit A	G3M9Z5	Bacillus_virus	4.7e-102	31.6
WP_009913867.1\|49683_50151_+	S-ribosylhomocysteine lyase	NA	NA	NA	NA
WP_014600793.1\|50477_52211_+	LapB repeat-containing protein	NA	NA	NA	NA
WP_012951575.1\|52542_54339_+	class 1 internalin InlK	NA	NA	NA	NA
WP_012951576.1\|54372_56241_-	peptidoglycan O-acetyltransferase OatA	B5WZU0	Pseudomonas_phage	6.5e-43	31.9
WP_003723737.1\|56453_57152_+	glycerophosphodiester phosphodiesterase	A0A0S2MYI4	Enterococcus_phage	1.3e-12	32.4
WP_003723738.1\|57384_59061_+	glycerol-3-phosphate dehydrogenase/oxidase	NA	NA	NA	NA
WP_014600794.1\|59186_60104_+\|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	NA	NA	NA	NA
WP_003719566.1\|60226_60460_+	RNA chaperone Hfq	NA	NA	NA	NA
WP_022741839.1\|60570_61794_+	GTPase HflX	NA	NA	NA	NA
WP_010989728.1\|61786_63013_+	methionine gamma-lyase family protein	NA	NA	NA	NA
WP_003719570.1\|63216_63585_+	MerR family transcriptional regulator	NA	NA	NA	NA
WP_003723435.1\|63655_64990_+	type I glutamate--ammonia ligase	M1NM71	Moumouvirus	4.2e-12	23.8
WP_014600796.1\|65133_66429_+	arsenic transporter	A0A2H4PQU3	Staphylococcus_phage	2.4e-145	61.6
WP_003723437.1\|66472_66994_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_003723438.1\|67024_67639_-	transcriptional repressor LexA	A0A1B2APZ1	Phage_Wrath	9.3e-15	62.1
WP_003723439.1\|67796_68126_+	cell division suppressor protein YneA	NA	NA	NA	NA
WP_003723440.1\|68217_68445_+	DUF896 domain-containing protein	NA	NA	NA	NA
WP_003732809.1\|68591_70586_+	transketolase	NA	NA	NA	NA
WP_003723442.1\|70806_71046_+	YneF family protein	NA	NA	NA	NA
WP_014600797.1\|71096_71939_-	DUF2785 domain-containing protein	NA	NA	NA	NA
WP_014600798.1\|71957_72689_-	methyltransferase domain-containing protein	A0A1X9I6N4	Streptococcus_phage	4.4e-80	58.7
WP_003723445.1\|72710_73217_-	ParB-like nuclease domain-containing protein	A0A220GKT8	Streptococcus_phage	4.0e-56	66.7
WP_003723446.1\|73226_74531_-	DUF3440 domain-containing protein	A0A220GKF8	Streptococcus_phage	9.5e-134	52.1
WP_010989732.1\|74520_75726_-	helicase SNF2	L0P6E9	Lactobacillus_phage	4.9e-92	47.1
WP_003723448.1\|75703_76078_-	hypothetical protein	NA	NA	NA	NA
WP_003723449.1\|76370_77099_+	UMP kinase	NA	NA	NA	NA
WP_003723450.1\|77098_77656_+	ribosome recycling factor	NA	NA	NA	NA
WP_014600799.1\|77885_78644_+	isoprenyl transferase	R9W0U9	Flavobacterium_phage	4.4e-22	42.1
WP_014600800.1\|78657_79446_+	phosphatidate cytidylyltransferase	NA	NA	NA	NA
WP_014600801.1\|79460_80603_+	1-deoxy-D-xylulose-5-phosphate reductoisomerase	NA	NA	NA	NA
WP_003723454.1\|80616_81879_+\|protease	RIP metalloprotease RseP	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

5. NZ_JNGJ01000020

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

75008 : 82852

Streptococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003722604.1\|75008_75980_-	DNA-binding protein WhiA	Q7AWZ3	Streptococcus_phage	5.2e-52	39.4
WP_003722605.1\|75987_76956_-	YvcK family protein	A1IMD5	Streptococcus_phage	6.7e-68	43.3
WP_010990001.1\|76957_77833_-	RNase adapter RapZ	A0A0R8VB27	Thermobifida_phage	3.2e-08	29.7
WP_014601136.1\|77940_79671_-	phospho-sugar mutase	A0A1X9I671	Streptococcus_phage	4.3e-174	53.3
WP_003734087.1\|79712_80774_-	galactose mutarotase	NA	NA	NA	NA
WP_014601137.1\|80790_81774_-	UDP-glucose 4-epimerase GalE	A0A2K9L5H6	Tupanvirus	1.2e-51	38.1
WP_003722610.1\|81892_82852_-	thioredoxin-disulfide reductase	G3MA85	Bacillus_virus	2.0e-88	53.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

6. NZ_JNGJ01000006

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_JNGJ01000006_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_JNGJ01000006_1

244348-244956

Orphan

I-A

Consensus_repeat	Method
GTTTTAGTTACTTATTGTGAAATGTAAAT	PILER-CR
GTTTTAGTTACTTATTGTGAAATGTAAAT	CRISPRCasFinder
GTTTTAGTTACTTATTGTGAAATGTAAAT	CRT

9 spacers

The CRISPR arrays of NZ_JNGJ01000006_1

>merge|NZ_JNGJ01000006|1|244348-244956|PILER-CR,CRISPRCasFinder,CRT
GTTTTAGTTACTTATTGTGAAATGTAAATTCTTTAGTTGTTACTTGTTGGTTAATGAGATCTACCGTTTTAGTTACTTATTGTGAAATGTAAATTGCTCTCTTTTGTGTAAAGCACATCAAGCATGTAGCGTTTTAGTTACTTATTGTGAAATGTAAATGCGATTTTTGTCAAAGGGACAGCGATGGGTTACAAGTTTTAGTTACTTATTGTGAAATGTAAATTTACCACCAAAGTCCCTACACTCAATACCACCAAAGCGTTTTAGTTACTTATTGTGAAATGTAAATCGCTCTGACCTGTTCCTTGTGCAACACTCGTTACAGTTTTAGTTACTTATTGTGAAATGTAAATTTTTCTACTCCTGCTTCTAAAATGTCGTTTATAAGTTTTAGTTACTTATTGTGAAATGTAAATCTAAAACATCCTTCACTGTATCAACTCCTTTCTATATTTTAGTTACTTATTGTGAAATGTAAATAAAATAGGAGGAAATAAATTATGACTATCAAATTAAGTTTTAGTTACTTATTGTGAAATGTAAATTTTGTTGAATCAACGGATATAGATTTTACAATTTCGTTTTAGTTACTTATTATGAAATGTAAAT

>NZ_JNGJ01000006|1|1|244348-244956|PILER-CR
GTTTTAGTTACTTATTGTGAAATGTAAAT	TCTTTAGTTGTTACTTGTTGGTTAATGAGATCTACC
GTTTTAGTTACTTATTGTGAAATGTAAAT	TGCTCTCTTTTGTGTAAAGCACATCAAGCATGTAGC
GTTTTAGTTACTTATTGTGAAATGTAAAT	GCGATTTTTGTCAAAGGGACAGCGATGGGTTACAA
GTTTTAGTTACTTATTGTGAAATGTAAAT	TTACCACCAAAGTCCCTACACTCAATACCACCAAAGC
GTTTTAGTTACTTATTGTGAAATGTAAAT	CGCTCTGACCTGTTCCTTGTGCAACACTCGTTACA
GTTTTAGTTACTTATTGTGAAATGTAAAT	TTTTCTACTCCTGCTTCTAAAATGTCGTTTATAA
GTTTTAGTTACTTATTGTGAAATGTAAAT	CTAAAACATCCTTCACTGTATCAACTCCTTTCTAT
ATTTTAGTTACTTATTGTGAAATGTAAAT	AAAATAGGAGGAAATAAATTATGACTATCAAATTAA
GTTTTAGTTACTTATTGTGAAATGTAAAT	TTTGTTGAATCAACGGATATAGATTTTACAATTTC
GTTTTAGTTACTTATTATGAAATGTAAAT

>NZ_JNGJ01000006|1|1|244348-244956|CRISPRCasFinder
GTTTTAGTTACTTATTGTGAAATGTAAAT	TCTTTAGTTGTTACTTGTTGGTTAATGAGATCTACC
GTTTTAGTTACTTATTGTGAAATGTAAAT	TGCTCTCTTTTGTGTAAAGCACATCAAGCATGTAGC
GTTTTAGTTACTTATTGTGAAATGTAAAT	GCGATTTTTGTCAAAGGGACAGCGATGGGTTACAA
GTTTTAGTTACTTATTGTGAAATGTAAAT	TTACCACCAAAGTCCCTACACTCAATACCACCAAAGC
GTTTTAGTTACTTATTGTGAAATGTAAAT	CGCTCTGACCTGTTCCTTGTGCAACACTCGTTACA
GTTTTAGTTACTTATTGTGAAATGTAAAT	TTTTCTACTCCTGCTTCTAAAATGTCGTTTATAA
GTTTTAGTTACTTATTGTGAAATGTAAAT	CTAAAACATCCTTCACTGTATCAACTCCTTTCTAT
ATTTTAGTTACTTATTGTGAAATGTAAAT	AAAATAGGAGGAAATAAATTATGACTATCAAATTAA
GTTTTAGTTACTTATTGTGAAATGTAAAT	TTTGTTGAATCAACGGATATAGATTTTACAATTTC
GTTTTAGTTACTTATTATGAAATGTAAAT

>NZ_JNGJ01000006|1|1|244348-244956|CRT
GTTTTAGTTACTTATTGTGAAATGTAAAT	TCTTTAGTTGTTACTTGTTGGTTAATGAGATCTACC
GTTTTAGTTACTTATTGTGAAATGTAAAT	TGCTCTCTTTTGTGTAAAGCACATCAAGCATGTAGC
GTTTTAGTTACTTATTGTGAAATGTAAAT	GCGATTTTTGTCAAAGGGACAGCGATGGGTTACAA
GTTTTAGTTACTTATTGTGAAATGTAAAT	TTACCACCAAAGTCCCTACACTCAATACCACCAAAGC
GTTTTAGTTACTTATTGTGAAATGTAAAT	CGCTCTGACCTGTTCCTTGTGCAACACTCGTTACA
GTTTTAGTTACTTATTGTGAAATGTAAAT	TTTTCTACTCCTGCTTCTAAAATGTCGTTTATAA
GTTTTAGTTACTTATTGTGAAATGTAAAT	CTAAAACATCCTTCACTGTATCAACTCCTTTCTAT
ATTTTAGTTACTTATTGTGAAATGTAAAT	AAAATAGGAGGAAATAAATTATGACTATCAAATTAA
GTTTTAGTTACTTATTGTGAAATGTAAAT	TTTGTTGAATCAACGGATATAGATTTTACAATTTC
GTTTTAGTTACTTATTATGAAATGTAAAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_JNGJ01000006.1\|WP_014930835.1\|245347_245926_+\|hypothetical-protein	unknown	unknown	unknown
NZ_JNGJ01000006.1\|WP_003721293.1\|241454_241748_+\|PTS-sugar-transporter-subunit-IIB	unknown	unknown	gnl\|CDD\|99908
NZ_JNGJ01000006.1\|WP_014600551.1\|250358_251789_-\|CapA-family-protein	unknown	unknown	gnl\|CDD\|225399
NZ_JNGJ01000006.1\|WP_003721298.1\|246738_247098_-\|Lin0512-family-protein	unknown	unknown	gnl\|CDD\|131113
NZ_JNGJ01000006.1\|WP_014600550.1\|247944_249780_+\|lmo0514-family-class-1-internalin	unknown	unknown	gnl\|CDD\|380190
NZ_JNGJ01000006.1\|WP_014600545.1\|235399_236050_+\|transaldolase	unknown	unknown	gnl\|CDD\|223254
NZ_JNGJ01000006.1\|WP_003733191.1\|238852_239320_+\|PTS-sugar-transporter-subunit-IIA	unknown	unknown	gnl\|CDD\|238129
NZ_JNGJ01000006.1\|WP_014600547.1\|239745_240396_+\|ribulose-phosphate-3-epimerase	unknown	unknown	gnl\|CDD\|223114
NZ_JNGJ01000006.1\|WP_003721301.1\|249880_250312_+\|universal-stress-protein	unknown	unknown	gnl\|CDD\|366180
NZ_JNGJ01000006.1\|WP_014600548.1\|241762_243034_+\|PTS-galactitol-transporter-subunit-IIC	unknown	unknown	gnl\|CDD\|226298
NZ_JNGJ01000006.1\|WP_012951252.1\|253005_253374_-\|DUF1304-domain-containing-protein	unknown	unknown	gnl\|CDD\|226282
NZ_JNGJ01000006.1\|WP_014600546.1\|236158_238219_+\|BglG-family-transcription-antiterminator	unknown	unknown	gnl\|CDD\|226234
NZ_JNGJ01000006.1\|WP_003721299.1\|247104_247563_-\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|378956
NZ_JNGJ01000006.1\|WP_003725720.1\|243173_244109_+\|ribose-phosphate-pyrophosphokinase	unknown	unknown	gnl\|CDD\|234929
NZ_JNGJ01000006.1\|WP_003721297.1\|246033_246714_+\|type-1-glutamine-amidotransferase	unknown	unknown	gnl\|CDD\|153212
NZ_JNGJ01000006.1\|WP_014600552.1\|251909_252725_-\|histidine-phosphatase-family-protein	unknown	unknown	gnl\|CDD\|223483
NZ_JNGJ01000006.1\|WP_003721290.1\|239336_239735_+\|hypothetical-protein	unknown	unknown	unknown
NZ_JNGJ01000006.1\|WP_003733192.1\|238222_238825_+\|SIS-domain-containing-protein	unknown	unknown	gnl\|CDD\|223865
NZ_JNGJ01000006.1\|WP_014600553.1\|253520_254936_+\|multidrug-efflux-MFS-transporter	unknown	unknown	gnl\|CDD\|129794
NZ_JNGJ01000006.1\|WP_003730559.1\|240392_241439_+\|galactitol-1-phosphate-5-dehydrogenase	unknown	unknown	gnl\|CDD\|176198

Protein	Function_ID	Function_description	E-value
NZ_JNGJ01000006.1\|WP_003721293.1\|241454_241748_+\|PTS-sugar-transporter-subunit-IIB	gnl\|CDD\|99908	cd05566, PTS_IIB_galactitol, PTS_IIB_galactitol: subunit IIB of enzyme II (EII) of the galactitol-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS). In this system, EII is a galactitol-specific permease with two cytoplasmic domains (IIA and IIB) and a transmembrane channel IIC domain that are expressed on three distinct polypeptide chains, in contrast to other PTS sugar transporters. The three genes encoding these subunits (gatA, gatB, and gatC) comprise the gatCBA operon. Galactitol PTS permease takes up exogenous galactitol, releasing the phosphate ester into the cytoplasm in preparation for oxidation and further metabolism via a modified glycolytic pathway called the tagatose-6-phosphate glycolytic pathway. The IIB domain fold includes a central four-stranded parallel open twisted beta-sheet flanked by alpha-helices on both sides. The seven major PTS systems with this IIB fold include galactitol, chitobiose/lichenan, ascorbate, lactose, mannitol, fructose, and a sensory system with similarity to the bacterial bgl system.	3.06007e-27
NZ_JNGJ01000006.1\|WP_014600551.1\|250358_251789_-\|CapA-family-protein	gnl\|CDD\|225399	COG2843, PgsA, Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation) [Cell envelope biogenesis, outer membrane].	9.64038e-100
NZ_JNGJ01000006.1\|WP_003721298.1\|246738_247098_-\|Lin0512-family-protein	gnl\|CDD\|131113	TIGR02058, lin0512_fam, conserved hypothetical protein. This family consists of few members, broadly distributed. It occurs so far in several Firmicutes (twice in Oceanobacillus), one Cyanobacterium, one alpha Proteobacterium, and (with a long prefix) in plants. The function is unknown. The alignment includes a perfectly conserved motif GxGxDxHG near the N-terminus. [Hypothetical proteins, Conserved].	5.62162e-67
NZ_JNGJ01000006.1\|WP_014600550.1\|247944_249780_+\|lmo0514-family-class-1-internalin	gnl\|CDD\|380190	NF033186, internalin_K, class 1 internalin InlK. Internalins, as found in the intracellular human pathogen Listeria monocytogenes, are paralogous surface-anchored proteins with an N-terminal signal peptide, leucine-rich repeats, and a C-terminal LPXTG processing and cell surface anchoring site. Members of this family are internalin K (InlK), a virulence factor. See articles PMID:17764999. for a general discussion of internalins, and PMID:21829365, PMID:22082958, and PMID:23958637 for more information about internalin K.	7.10028e-119
NZ_JNGJ01000006.1\|WP_014600545.1\|235399_236050_+\|transaldolase	gnl\|CDD\|223254	COG0176, MipB, Transaldolase [Carbohydrate transport and metabolism].	2.47908e-62
NZ_JNGJ01000006.1\|WP_003733191.1\|238852_239320_+\|PTS-sugar-transporter-subunit-IIA	gnl\|CDD\|238129	cd00211, PTS_IIA_fru, PTS_IIA, PTS system, fructose/mannitol specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIA PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation.	2.76446e-37
NZ_JNGJ01000006.1\|WP_014600547.1\|239745_240396_+\|ribulose-phosphate-3-epimerase	gnl\|CDD\|223114	COG0036, Rpe, Pentose-5-phosphate-3-epimerase [Carbohydrate transport and metabolism].	3.07191e-108
NZ_JNGJ01000006.1\|WP_003721301.1\|249880_250312_+\|universal-stress-protein	gnl\|CDD\|366180	pfam00582, Usp, Universal stress protein family. The universal stress protein UspA is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. UspA enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae UspA reveals an alpha/beta fold similar to that of the Methanococcus jannaschii MJ0577 protein, which binds ATP, though UspA lacks ATP-binding activity.	4.03126e-27
NZ_JNGJ01000006.1\|WP_014600548.1\|241762_243034_+\|PTS-galactitol-transporter-subunit-IIC	gnl\|CDD\|226298	COG3775, GatC, Phosphotransferase system, galactitol-specific IIC component [Carbohydrate transport and metabolism].	2.71123e-177
NZ_JNGJ01000006.1\|WP_012951252.1\|253005_253374_-\|DUF1304-domain-containing-protein	gnl\|CDD\|226282	COG3759, COG3759, Predicted membrane protein [Function unknown].	8.73125e-42
NZ_JNGJ01000006.1\|WP_014600546.1\|236158_238219_+\|BglG-family-transcription-antiterminator	gnl\|CDD\|226234	COG3711, BglG, Transcriptional antiterminator [Transcription].	4.55419e-80
NZ_JNGJ01000006.1\|WP_003721299.1\|247104_247563_-\|MarR-family-transcriptional-regulator	gnl\|CDD\|378956	pfam12802, MarR_2, MarR family. The Mar proteins are involved in the multiple antibiotic resistance, a non-specific resistance system. The expression of the mar operon is controlled by a repressor, MarR. A large number of compounds induce transcription of the mar operon. This is thought to be due to the compound binding to MarR, and the resulting complex stops MarR binding to the DNA. With the MarR repression lost, transcription of the operon proceeds. The structure of MarR is known and shows MarR as a dimer with each subunit containing a winged-helix DNA binding motif.	8.31646e-13
NZ_JNGJ01000006.1\|WP_003725720.1\|243173_244109_+\|ribose-phosphate-pyrophosphokinase	gnl\|CDD\|234929	PRK01259, PRK01259, ribose-phosphate diphosphokinase.	6.72103e-154
NZ_JNGJ01000006.1\|WP_003721297.1\|246033_246714_+\|type-1-glutamine-amidotransferase	gnl\|CDD\|153212	cd01741, GATase1_1, Subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain. This group contains a subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain. GATase activity catalyses the transfer of ammonia from the amide side chain of glutamine to an acceptor substrate. Glutamine amidotransferases (GATase) includes the triad family of amidotransferases which have a conserved Cys-His-Glu catalytic triad in the glutaminase active site. In this subgroup this triad is conserved. GATase activity can be found in a range of biosynthetic enzymes, including: glutamine amidotransferase, formylglycinamide ribonucleotide, GMP synthetase , anthranilate synthase component II, glutamine-dependent carbamoyl phosphate synthase, cytidine triphosphate synthetase, gamma-glutamyl hydrolase, imidazole glycerol phosphate synthase and, cobyric acid synthase. Glutamine amidotransferase (GATase) domains can occur either as single polypeptides, as in glutamine amidotransferases, or as domains in a much larger multifunctional synthase protein, such as CPSase.	7.71833e-60
NZ_JNGJ01000006.1\|WP_014600552.1\|251909_252725_-\|histidine-phosphatase-family-protein	gnl\|CDD\|223483	COG0406, phoE, Broad specificity phosphatase PhoE and related phosphatases [General function prediction only].	3.00317e-49
NZ_JNGJ01000006.1\|WP_003733192.1\|238222_238825_+\|SIS-domain-containing-protein	gnl\|CDD\|223865	COG0794, GutQ, Predicted sugar phosphate isomerase involved in capsule formation [Cell envelope biogenesis, outer membrane].	1.15952e-75
NZ_JNGJ01000006.1\|WP_014600553.1\|253520_254936_+\|multidrug-efflux-MFS-transporter	gnl\|CDD\|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	1.34585e-79
NZ_JNGJ01000006.1\|WP_003730559.1\|240392_241439_+\|galactitol-1-phosphate-5-dehydrogenase	gnl\|CDD\|176198	cd08236, sugar_DH, NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Horse liver alcohol dehydrogenase is a dimeric enzyme and each subunit has two domains. The NAD binding domain is in a Rossmann fold and the catalytic domain contains a zinc ion to which substrates bind. There is a cleft between the domains that closes upon formation of the ternary complex.	0

>NZ_JNGJ01000006.1|WP_003725720.1|243173_244109_+|ribose-phosphate-pyrophosphokinase
MAGKMKLFSVTSERPLATKIADYLDIPLCEVELQKFSDGEVKINIEESIRGTNAYVVQSMNSNVNERLMELLIMVDALKRASVHSINIIMPYYGYARQDRKARSREPITAKLMANLIQRAGADRLITVDLHAAQIQGFFNIPIDHLSAIPLIGDYLIENYGEKDVVVVAPDHSGVVRARRIADRLNAPIAILNRKPRPHEDEIMSVIGDVKGKVAIVVDDIIDTGVRATTSADILLEKGAVEVIACATHSVMAGNATERLQNSNIKEVITSDSIDLPEDKQFDKLTTISIGRILGRAIEGVQENRSLHPLF
>NZ_JNGJ01000006.1|WP_014600548.1|241762_243034_+|PTS-galactitol-transporter-subunit-IIC
MDIILDFFKYIIGLGVTVMMPIIITILGVIFRKKISVAFKAGLTVGVGFVGLGVITSLMLTTITPVTKALVENYNFKLTATDIGWGVGSSLAWGTEVVPFVFVAIIATNILMIAFKWTKTMDVDIWNYWQPLFIASALYLTTGSMIIAILSSIINMAIIFKIADWTQKDVENVLGLEGISLPQIQTTGWALVGYPMNWLLGKIPGVRKINWSTEKVQSRLGIFGEPMLMGLIIGGGLAAIAQMPLSQVLQTGVTIAASLVLIPRMVSLLMDGLTVISEAAHEFMEKRFPGRELFIGLDSAVGIGHPFVLSLGLLMIPITLILAFVLPGNKVLPLADLTALPFYMIFAIVPSKGNLFRGIFTGIVIVIITLYLSGAAAPLMTELAGQIGYNIPKDAVEVTSLAVGTQWYTWIVYYGLHWFGGIL
>NZ_JNGJ01000006.1|WP_003721293.1|241454_241748_+|PTS-sugar-transporter-subunit-IIB
MKKKRIYVCCGTGIATSTVISKKVRAVLDEKRIPYEISQCTVQEVASKVSTSKPDIIVSSTTVTGDVGDVPVVIGRSFLTGLKKQETIDEILAILQD
>NZ_JNGJ01000006.1|WP_003730559.1|240392_241439_+|galactitol-1-phosphate-5-dehydrogenase
MKALKLYGKRDLRYEEADMPTIEQPDDVILKVKTVGICGSDISRYSKLGPYVPGMVWGHEFSGEVIEVGSEVTDIEIGDRAAGCPALYCGECEYCKKGEFARCRKLTVIGARHPGAYAEYIKLPAENVVKIPDELDYEAAALVEPSAVVVHGFYHTKLQAGDDVVVVGSGNIGLLAIQWAKVFGARRVIAIDVDDKKLALAKEVGADVVINSLKEDPLEVVAAHTDGLNADLVVEAAGSPITSAQVFAYAKKGGGVVFLGIPYADVTIERFYFEKIVRSELTVWGSWNAISAPFPGKEWQTTIHFLANKQINIEPMITHRLSLAEGPEVFERIYERNEFFGKVLFFPE
>NZ_JNGJ01000006.1|WP_014600547.1|239745_240396_+|ribulose-phosphate-3-epimerase
MAKIVPSVFGADIGRINEQLQVLEKNDIDLLHVDMMDGSFVPNIAFGPDQIKMMKKGTKLQFDVHMMVYEPDRYIPRLVEAGAHMITVHQEATTHLHRTIQLIKSYGVRAGVVLNPGTPPSTLEYVLDDIDCILLMTVNPGLGGQKFFQSSLEKIRKTKAYIGNRPIQIEVDGGVNDELAKECTLAGADLIVVGSYLFEGDIEANLEKLSKGVLTE
>NZ_JNGJ01000006.1|WP_003721290.1|239336_239735_+|hypothetical-protein
MGSFFASFVDWLIGSPGRFVVNLIEDNMLIFMVVVMIYATTILYAKWTLAYYLPKKMSQLAEMKTWELDELYAAWQTEKKALPWYILVPSRNEFWVKSARNAPESTKLLHFSQQKLKLSDKEKLQKIIEIQS
>NZ_JNGJ01000006.1|WP_003733191.1|238852_239320_+|PTS-sugar-transporter-subunit-IIA
MDVLEYFKEEMVRFSNEQNKEKLLAEMAEQLCEVGAVKPSYKDAVIKREKVFPTGLLTAHAGVAIPHTDSEHVIRPVVAVRILKKPVSFIEMASDNEAIDVRIVFMMALRSADEQLDMLQTLIQLIQDEEVMTTLLKAQETGDVLSAIEHFSKNN
>NZ_JNGJ01000006.1|WP_003733192.1|238222_238825_+|SIS-domain-containing-protein
MDKQAILNNIHQTWQEEANAISRLPEVTSEEALVKTVEKIAECTGKIVVAGCGTSGVAAKKLVHSFNCIERPAVFLTPSDAVHGTLGVLQKEDILILISKGGNTGELLNLIPACKTKGSTLIGVTENPDSVIAKEADIFFPVSVSKEPDPFNMLATASTMAVIASFDAVIVCLMTYMNYTKEQFSVIHPGGAVGNKLLNK
>NZ_JNGJ01000006.1|WP_014600546.1|236158_238219_+|BglG-family-transcription-antiterminator
MYLDNRSKTLFQEVIKNPNITNKQLEVKYKLSRYQISYSFQKVNEWLKWKNYPEVKRSKNGRFILEPELTALFSEKETRDPSVEYLPSENERANLILLMLLTSKEELSLAHFTTKIQVSKNTILRDLKVAQKLLPKETTVTYSRASGYQLAGSEWELRKVLTQVVSSVKEMFRGEHYFLSYSGIEKVQLMEIRRTLEEAEAMMQIKFTYEQIELLPYLLSVMFLRIRDRRLINTAFHIDEKSLSDTREYHITDILLEKTGPVPEQERLFITLQLLTTNIFSGEILTEKLTEDLEKVVLTCLDLFEKKALVSLKNKHILIEKLLLHLKPAYYRIKYQMNLEDTLYEKFNQEFEALNFIVKEAFDPLAKFIGREIPAGEIFFISLFIGSDMIPQNDIYHKQKRAIVLCPSGVTFSKIMENILVKLFPEIHFYPTISVREYAFFKAEVDIVFSSIPLKDGENVFVVQPFMNDIEKTQLRQHVLQNLFGMGNQLTSIDKIMEVVERNADIKDPNAIRDGIIDILSANTATDENKRVKKVYLHDLITEDNIMICEDVKNYQEAIRLASQPLLLQQAITANYVKTMIDNHKFHDPYIIIGEDIAIPHAMPNAGVNRLAMSLLVVKNGVYFSETEQVHFVIVIAPVDKEQHIEALYQIVHLAENHQILDDLLENVTKEKIMQTINQLVIREDE
>NZ_JNGJ01000006.1|WP_014600545.1|235399_236050_+|transaldolase
MHLDSANLDDVKKIQASSIFKGITTNPSILVKEKCNRQTAINRILELTDKQVFVQTVGFTYEEILADARMLLTMFGKDKIAIKIPAHEAGTNVIDTLKKEDKTIQILGTAIYSADQAITAALAGADFVAPYVNRMSAANIDPFKEITQMRHFFDKKALKTQIMAASFKHSGQVMQAYESGADTVTIPYEIYSQMTNKVLAVEAIRVFNEDAVLYEK
>NZ_JNGJ01000006.1|WP_014930835.1|245347_245926_+|hypothetical-protein
MKKILVPILLLATILASCSSPNEKITKDTKISKTITIRADYKVPKDIKELEDDSANIVKVKFLQNKTIGKDGSTISEIEILTSYKGNLEKGSKVDISEPWYLSDGKYVAVENYIALDKEQEYTIFLGEKDKDTYPLSSLGYGKFGGSLKEDQAVLADFNILGEVQKFDFIAENTEEVKNYQLIKEQVAGKYK
>NZ_JNGJ01000006.1|WP_003721297.1|246033_246714_+|type-1-glutamine-amidotransferase
MIIDVLQHVPHEGPGLIANWARENQHQLKIHSLFEENAHVPNDSDFLIVLGGPMGINDTAEFPWLKDERKLIKRLSEQHKPVFGVCLGAQQIAATFGSEITVNKEKEVGWFPVKRTSDKLLFFPESLNVFHWHQDTFALPTGSTRLFASEGCLNQAFLYGENIIGLQFHFEMEKAGIETILRIDEAFITPGKYVQSVEVMREKDVPEDNKQMLEAILDYLINPKTI
>NZ_JNGJ01000006.1|WP_003721298.1|246738_247098_-|Lin0512-family-protein
MEQILFIQTGFGVDVHGQNITKAAERAVRNAIFTNSMPGIQGLLPDGDLQNMVVNIKLALPCDADQLDEDTIRAIIPYGTVTIEKMAGGMMTTSGIFLEDKEDKNDLMYIVNASVETGY
>NZ_JNGJ01000006.1|WP_003721299.1|247104_247563_-|MarR-family-transcriptional-regulator
MNNEQNMNQQIALFYFGYKAFTETADLIIAKHSLKRLHHRILFFTARMPGLTINELLTFLEISKQALHQPLAELKERELLTIEQGRRDKRQRCIFLTSAGKELENELGDAQRKQMSEIFTNSADTDGMHFTEVMEGYAKNRPGAAFIKDFKE
>NZ_JNGJ01000006.1|WP_014600550.1|247944_249780_+|lmo0514-family-class-1-internalin
MKKALKLFLAMICMFIMIYPSTAAHAEETNIVNIPDANLKTYLNGLLKQASDAPITKTQMNTIQTVTLSGSTYTDLTGLEEAGNLVTLSINNTNIQTLEPIKNQTSLTYLTVGGDNVKDSLFVDLNGLVNLQSLSINGSEVTHNVFKTFNKLPKLTYLYAQNSMKITDISALASLPALTTLFLQFDGIDDFRPLNDFESFKNGNLKALAAFGQNTGRTNPRITLKSGKLDYDETNQTLYLPFSMMPKPLTSFDGTVAPFSKSTSASNTYLGFNDVALPSSRLSITDDGITVSGVTKEEFDNLDEIEYNARYDFPTGSYPTPPSMTSYTISSGTYDQYFDISHTLDLMADESFDYNQYDTTSEEQFLKDVHAETDDGTAVKSDFDQVVKLDVPGEYTVTLNAENAAGLKATPVTVKVTVHEKPVITSDSQISYKKETTKSVDEFLKEIHGSVTGNAVLTSDFDKVVDLNTPGEYTVTLNAINDRGQKADPVTVVVTVTTSDSGHVDPVPPTPEIKPTPQEETDQTIIPEPQSETTEDSVKEDQAKDGQAKSEEKADKTSLTTKENKVEKSEKTNQPKTKALPQTGDTNKTALPIAGVMLSLAALLIFRKSKS
>NZ_JNGJ01000006.1|WP_003721301.1|249880_250312_+|universal-stress-protein
MEKYHRILVAVDGSEPAKLAFEKGLELALKLDGVLGIASIVDLRAFSPNVSYDGSLEEKAELELKTSVNEYAEKARTAGVKQVETFVAKGNPKILLSTDIPAEFQADLIICGATGMNRVEKLVLGSVSSYIMAHAICDTLIAR
>NZ_JNGJ01000006.1|WP_014600551.1|250358_251789_-|CapA-family-protein
MKKLTYVIITGLVLVFIAGAFWITNSTNQSDQKATQTEPIKKISPANVKTISSEAKKTLNSLASSGADKASISDLKQLIKELKSYPTEKNDSGVYLQNLTACLEAVKSYTTGKTDEKTLGKVYPAFLASEQKLSAIEKTNQYDWFYAAAATNQQGLKEKGVVTLTMVGDNSFGTYPETPEHLKFDNVFQKNNGNNTYVYKNCLPWFKSDDYTVINAESAFTNATKAENKKWRIKSDPAHVAFLPASGVEAANLANNHTMDYFQVGYDDTLKAFKENNIPVFNTDAPLETTIKGMKTVLLGYDCRMSQQSPAYLERIVKDVKKYKKEDTLVIVNMHWGVEYRETPTDYQTQFGHAILDAGADIIMGSHPHRLESVEKYKDKYIVYSMGDFAFGADPTLLSRMTSMFQLRFTKEDNKIVLKDISIVPTYENSDGSTTENNYQPLPVFGDDAKKIVDELNRISKPIEGGVTEYTYFDPF
>NZ_JNGJ01000006.1|WP_014600552.1|251909_252725_-|histidine-phosphatase-family-protein
MKKNIFKLLMALCAVLLIAGCGNSTSADKKETKETKEDGTVTFYVVRHGKTMLNTTDRVQGWSDAVLTPAGEEVVKSAGKGLKDVDFSAAYSSDSGRAIQTANLILKESDKSADKEVQTDQRFREFNFGSYEGDLNENMWTDIAKSQGKTLEEWQKAGISPKDFADSVAALDKTRVKEGENWPAEDYATIQARLKEGLTDVAKKESKNGDSNVLLVSHGLSIGALLDTIEPGYKLPAEGIKNASVTKITYKDGKFTIGDVNDLSYVEKGSK
>NZ_JNGJ01000006.1|WP_012951252.1|253005_253374_-|DUF1304-domain-containing-protein
MAILAFILTFIVMIEHIYIMILEMFFANTKLAAKTFGVEKELLANKKVQTLFANQGLYNGFLAAGLVWGLFFAGAGMAETVQIFFLSCVVVAALFGGATSSKGILVKQGLPAVLALVAVLLV
>NZ_JNGJ01000006.1|WP_014600553.1|253520_254936_+|multidrug-efflux-MFS-transporter
MQQEATGGQKIRPIPIIASFLMAGFIGLFSETALNMALSDLIQVFDISSATVQWLTTGYLLTLGILVPISGLLLQWFTTRGLFFTAVSFSIAGTLIAALSPTFAMLMIGRVVQAVGTALLLPLMFNTILLIFPEHKRGSAMGMIGLVIMFAPAVGPTISGLILENLTWNWIFWISLPFLIIALLFGMKFMQNVSVVTKPKIDILSIILSTLGFGGVVFAFSSAGESGWGSATVLVSIIVGGLALGLFVWRQLTMEKPLMDLKVFRYPMFTLGLILVFISFMMILSTMILLPLYLQNSLALAAFSAGLVLLPGGVLNGLMSPFTGRLFDAYGPRALVIPGFIVAVVALFFLTRIEVGTSALTIIVLHSVLMIGISMVMMPAQTNGLNQLPPKLYPDGTAIMNTLQQVSGAIGTAVAITIMSAGQKAYMETAQGVGPEQMVASLTAGIQNAFVFGLIMACIGLLCSLFIRKAK

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Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_JNGJ01000006_1	1.7\|244764\|35\|NZ_JNGJ01000006\|PILER-CR,CRISPRCasFinder,CRT	244764-244798	35	NZ_JNGJ01000012.1	2911-2945	1	0.971
NZ_JNGJ01000006_1	1.8\|244828\|36\|NZ_JNGJ01000006\|PILER-CR,CRISPRCasFinder,CRT	244828-244863	36	NZ_JNGJ01000011.1	293980-294015	0	1.0

1. spacer 1.7|244764|35|NZ_JNGJ01000006|PILER-CR,CRISPRCasFinder,CRT matches to position: 2911-2945, mismatch: 1, identity: 0.971

ctaaaacatccttcactgtatcaactcctttctat	CRISPR spacer
ctaaaacatccttcactgtctcaactcctttctat	Protospacer
******************* ***************

2. spacer 1.8|244828|36|NZ_JNGJ01000006|PILER-CR,CRISPRCasFinder,CRT matches to position: 293980-294015, mismatch: 0, identity: 1.0

aaaataggaggaaataaattatgactatcaaattaa	CRISPR spacer
aaaataggaggaaataaattatgactatcaaattaa	Protospacer
************************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_JNGJ01000006_1	1.8\|244828\|36\|NZ_JNGJ01000006\|PILER-CR,CRISPRCasFinder,CRT	244828-244863	36	MT500540	Listeria phage LP-HM00113468, complete genome	683-718	0	1.0
NZ_JNGJ01000006_1	1.8\|244828\|36\|NZ_JNGJ01000006\|PILER-CR,CRISPRCasFinder,CRT	244828-244863	36	NC_009812	Listeria phage B025, complete genome	3896-3931	0	1.0
NZ_JNGJ01000006_1	1.8\|244828\|36\|NZ_JNGJ01000006\|PILER-CR,CRISPRCasFinder,CRT	244828-244863	36	KJ094023	Listeria phage LP-101, complete genome	3936-3971	0	1.0
NZ_JNGJ01000006_1	1.9\|244893\|35\|NZ_JNGJ01000006\|PILER-CR,CRISPRCasFinder,CRT	244893-244927	35	DQ003642	Listeria phage A006, complete genome	15712-15746	0	1.0
NZ_JNGJ01000006_1	1.3\|244507\|35\|NZ_JNGJ01000006\|PILER-CR,CRISPRCasFinder,CRT	244507-244541	35	MH341453	Listeria phage PSU-VKH-LP041, complete genome	10139-10173	1	0.971
NZ_JNGJ01000006_1	1.7\|244764\|35\|NZ_JNGJ01000006\|PILER-CR,CRISPRCasFinder,CRT	244764-244798	35	NC_021539	Listeria phage LP-030-2, complete genome	18926-18960	1	0.971
NZ_JNGJ01000006_1	1.7\|244764\|35\|NZ_JNGJ01000006\|PILER-CR,CRISPRCasFinder,CRT	244764-244798	35	KJ094023	Listeria phage LP-101, complete genome	22882-22916	1	0.971
NZ_JNGJ01000006_1	1.8\|244828\|36\|NZ_JNGJ01000006\|PILER-CR,CRISPRCasFinder,CRT	244828-244863	36	NZ_LR134403	Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence	213463-213498	1	0.972
NZ_JNGJ01000006_1	1.3\|244507\|35\|NZ_JNGJ01000006\|PILER-CR,CRISPRCasFinder,CRT	244507-244541	35	NC_009813	Listeria phage B054, complete genome	10139-10173	2	0.943
NZ_JNGJ01000006_1	1.7\|244764\|35\|NZ_JNGJ01000006\|PILER-CR,CRISPRCasFinder,CRT	244764-244798	35	NC_009812	Listeria phage B025, complete genome	23381-23415	2	0.943
NZ_JNGJ01000006_1	1.8\|244828\|36\|NZ_JNGJ01000006\|PILER-CR,CRISPRCasFinder,CRT	244828-244863	36	JN700520	Staphylococcus phage StB12, complete genome	6832-6867	5	0.861
NZ_JNGJ01000006_1	1.8\|244828\|36\|NZ_JNGJ01000006\|PILER-CR,CRISPRCasFinder,CRT	244828-244863	36	MW084976	Bacillus phage Kirov, complete genome	27565-27600	8	0.778
NZ_JNGJ01000006_1	1.9\|244893\|35\|NZ_JNGJ01000006\|PILER-CR,CRISPRCasFinder,CRT	244893-244927	35	NZ_CP029455	Bacillus cereus strain FORC087 plasmid pFORC087.1, complete sequence	130632-130666	11	0.686
NZ_JNGJ01000006_1	1.9\|244893\|35\|NZ_JNGJ01000006\|PILER-CR,CRISPRCasFinder,CRT	244893-244927	35	NZ_CP015592	Bacillus cereus strain AR156 plasmid pAR460, complete sequence	17622-17656	11	0.686
NZ_JNGJ01000006_1	1.9\|244893\|35\|NZ_JNGJ01000006\|PILER-CR,CRISPRCasFinder,CRT	244893-244927	35	NZ_CP009368	Bacillus cereus strain FM1 plasmid unnamed, complete sequence	31860-31894	11	0.686
NZ_JNGJ01000006_1	1.9\|244893\|35\|NZ_JNGJ01000006\|PILER-CR,CRISPRCasFinder,CRT	244893-244927	35	NZ_CP009336	Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence	338888-338922	11	0.686

1. spacer 1.8|244828|36|NZ_JNGJ01000006|PILER-CR,CRISPRCasFinder,CRT matches to MT500540 (Listeria phage LP-HM00113468, complete genome) position: , mismatch: 0, identity: 1.0

aaaataggaggaaataaattatgactatcaaattaa	CRISPR spacer
aaaataggaggaaataaattatgactatcaaattaa	Protospacer
************************************

2. spacer 1.8|244828|36|NZ_JNGJ01000006|PILER-CR,CRISPRCasFinder,CRT matches to NC_009812 (Listeria phage B025, complete genome) position: , mismatch: 0, identity: 1.0

aaaataggaggaaataaattatgactatcaaattaa	CRISPR spacer
aaaataggaggaaataaattatgactatcaaattaa	Protospacer
************************************

3. spacer 1.8|244828|36|NZ_JNGJ01000006|PILER-CR,CRISPRCasFinder,CRT matches to KJ094023 (Listeria phage LP-101, complete genome) position: , mismatch: 0, identity: 1.0

aaaataggaggaaataaattatgactatcaaattaa	CRISPR spacer
aaaataggaggaaataaattatgactatcaaattaa	Protospacer
************************************

4. spacer 1.9|244893|35|NZ_JNGJ01000006|PILER-CR,CRISPRCasFinder,CRT matches to DQ003642 (Listeria phage A006, complete genome) position: , mismatch: 0, identity: 1.0

tttgttgaatcaacggatatagattttacaatttc	CRISPR spacer
tttgttgaatcaacggatatagattttacaatttc	Protospacer
***********************************

5. spacer 1.3|244507|35|NZ_JNGJ01000006|PILER-CR,CRISPRCasFinder,CRT matches to MH341453 (Listeria phage PSU-VKH-LP041, complete genome) position: , mismatch: 1, identity: 0.971

gcgatttttgtcaaagggacagcgatgggttacaa	CRISPR spacer
gcgatttttgtcaaaggaacagcgatgggttacaa	Protospacer
*****************.*****************

6. spacer 1.7|244764|35|NZ_JNGJ01000006|PILER-CR,CRISPRCasFinder,CRT matches to NC_021539 (Listeria phage LP-030-2, complete genome) position: , mismatch: 1, identity: 0.971

ctaaaacatccttcactgtatcaactcctttctat	CRISPR spacer
ctaaaacatccttcactgtctcaactcctttctat	Protospacer
******************* ***************

7. spacer 1.7|244764|35|NZ_JNGJ01000006|PILER-CR,CRISPRCasFinder,CRT matches to KJ094023 (Listeria phage LP-101, complete genome) position: , mismatch: 1, identity: 0.971

ctaaaacatccttcactgtatcaactcctttctat	CRISPR spacer
ctaaaacatccttcactgtctcaactcctttctat	Protospacer
******************* ***************

8. spacer 1.8|244828|36|NZ_JNGJ01000006|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR134403 (Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence) position: , mismatch: 1, identity: 0.972

aaaataggaggaaataaattatgactatcaaattaa	CRISPR spacer
aaaataggaggaaatagattatgactatcaaattaa	Protospacer
****************.*******************

9. spacer 1.3|244507|35|NZ_JNGJ01000006|PILER-CR,CRISPRCasFinder,CRT matches to NC_009813 (Listeria phage B054, complete genome) position: , mismatch: 2, identity: 0.943

gcgatttttgtcaaagggacagcgatgggttacaa	CRISPR spacer
gcgatttttgtcaaaggaacggcgatgggttacaa	Protospacer
*****************.**.**************

10. spacer 1.7|244764|35|NZ_JNGJ01000006|PILER-CR,CRISPRCasFinder,CRT matches to NC_009812 (Listeria phage B025, complete genome) position: , mismatch: 2, identity: 0.943

ctaaaacatccttcactgtatcaactcctttctat	CRISPR spacer
ctaaaacatccttcactatctcaactcctttctat	Protospacer
*****************.* ***************

11. spacer 1.8|244828|36|NZ_JNGJ01000006|PILER-CR,CRISPRCasFinder,CRT matches to JN700520 (Staphylococcus phage StB12, complete genome) position: , mismatch: 5, identity: 0.861

aaaataggaggaaataaattatgact-atcaaattaa	CRISPR spacer
taaataggaggaagtaaataatgactaatcaaacta-	Protospacer
 ************.***** ****** ******.**

12. spacer 1.8|244828|36|NZ_JNGJ01000006|PILER-CR,CRISPRCasFinder,CRT matches to MW084976 (Bacillus phage Kirov, complete genome) position: , mismatch: 8, identity: 0.778

aaaataggaggaaataaattatgactatcaaattaa	CRISPR spacer
ttaataggaggaaataaataatggctatcgtaagaa	Protospacer
  ***************** ***.*****. *  **

13. spacer 1.9|244893|35|NZ_JNGJ01000006|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029455 (Bacillus cereus strain FORC087 plasmid pFORC087.1, complete sequence) position: , mismatch: 11, identity: 0.686

tttgttgaatcaacggatatagattttacaatttc	CRISPR spacer
agaaaaaaatcaaccgatatagattttaaaatctt	Protospacer
   .  .******* ************* ***.*.

14. spacer 1.9|244893|35|NZ_JNGJ01000006|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015592 (Bacillus cereus strain AR156 plasmid pAR460, complete sequence) position: , mismatch: 11, identity: 0.686

tttgttgaatcaacggatatagattttacaatttc	CRISPR spacer
aagaaaaaatcaaccgatatagattttaaaatctt	Protospacer
   .  .******* ************* ***.*.

15. spacer 1.9|244893|35|NZ_JNGJ01000006|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009368 (Bacillus cereus strain FM1 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.686

tttgttgaatcaacggatatagattttacaatttc	CRISPR spacer
agaaaaaaatcaaccgatatagattttaaaatctt	Protospacer
   .  .******* ************* ***.*.

16. spacer 1.9|244893|35|NZ_JNGJ01000006|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009336 (Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence) position: , mismatch: 11, identity: 0.686

tttgttgaatcaacggatatagattttacaatttc	CRISPR spacer
agaaaaaaatcaaccgatatagattttaaaatctt	Protospacer
   .  .******* ************* ***.*.

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

7. NZ_JNGJ01000028

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 35241

Listeria_phage(93.62%)

tail,terminase,holin,integrase,capsid

attL 10437:10449|attR 35258:35270

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060571536.1\|0_737_-	M15 family metallopeptidase	A0A059T7Y8	Listeria_phage	3.2e-118	94.8
WP_003722522.1\|736_1018_-\|holin	holin	A8ASL4	Listeria_phage	3.4e-41	94.6
WP_003722523.1\|1030_1396_-	hypothetical protein	Q9T1A0	Listeria_phage	7.4e-12	100.0
WP_023553771.1\|1434_3600_-\|tail	phage tail protein	A8ATW1	Listeria_phage	0.0e+00	94.3
WP_023552439.1\|3612_5181_-\|tail	phage tail family protein	A8ATW0	Listeria_phage	1.5e-303	99.2
WP_060571537.1\|5177_9968_-\|tail	phage tail tape measure protein	A8ATV9	Listeria_phage	0.0e+00	88.6
WP_074046934.1\|9972_10284_-	hypothetical protein	A0A0B5D116	Listeria_phage	1.3e-41	96.7
WP_047934336.1\|10280_10712_-	hypothetical protein	A8ATV7	Listeria_phage	1.8e-73	98.6
10437:10449	attL	NA	NA	NA	NA
WP_003733697.1\|10767_11457_-	Ig domain-containing protein	A8ATV6	Listeria_phage	2.8e-100	85.6
WP_003725064.1\|11461_11833_-	hypothetical protein	A8ATV5	Listeria_phage	8.5e-64	100.0
WP_003733696.1\|11829_12147_-	HK97 gp10 family phage protein	A8ATV4	Listeria_phage	4.6e-50	96.2
WP_003733695.1\|12136_12502_-	hypothetical protein	A8ATV3	Listeria_phage	9.9e-65	99.2
WP_003723785.1\|12501_12855_-	hypothetical protein	A8ATV2	Listeria_phage	8.4e-61	99.1
WP_003725067.1\|12855_13011_-	hypothetical protein	A0A0B5CYK6	Listeria_phage	1.0e-18	98.0
WP_003725068.1\|13024_13897_-	hypothetical protein	A0A0B5CTX8	Listeria_phage	4.5e-164	99.7
WP_031641740.1\|13919_14474_-	hypothetical protein	A0A0B5CTR8	Listeria_phage	2.6e-88	100.0
WP_060571538.1\|14569_15613_-\|capsid	minor capsid protein	A0A0B5D111	Listeria_phage	1.7e-197	97.7
WP_060571539.1\|15617_17174_-	hypothetical protein	A8ATU7	Listeria_phage	7.0e-301	99.2
WP_046670975.1\|17188_18517_-\|terminase	PBSX family phage terminase large subunit	A0A0B5CYJ6	Listeria_phage	1.0e-231	86.8
WP_046670977.1\|18446_19232_-	hypothetical protein	A0A0B5CTX0	Listeria_phage	1.6e-128	96.3
WP_012951944.1\|19271_19499_-	hypothetical protein	A8AU06	Listeria_phage	1.5e-34	100.0
WP_031670269.1\|19579_20212_-	hypothetical protein	A8AU05	Listeria_phage	4.0e-114	99.0
WP_003734123.1\|20393_20828_-	hypothetical protein	A8AU03	Listeria_phage	9.0e-73	95.1
WP_060571540.1\|20972_21377_-	endodeoxyribonuclease	A8AU00	Listeria_phage	1.6e-71	99.3
WP_014601286.1\|21342_21483_-	BH0509 family protein	A8ATZ9	Listeria_phage	2.6e-18	100.0
WP_031641288.1\|21479_21785_-	hypothetical protein	A8ATZ8	Listeria_phage	5.0e-46	99.0
WP_060571541.1\|21816_22299_-	single-stranded DNA-binding protein	A8ATZ7	Listeria_phage	8.7e-77	91.2
WP_003733878.1\|22295_22475_-	hypothetical protein	A0A076G7F4	Listeria_phage	8.1e-20	87.3
WP_060571542.1\|22471_22687_-	hypothetical protein	NA	NA	NA	NA
WP_172425739.1\|22683_22857_-	hypothetical protein	A0A059T7N2	Listeria_phage	1.2e-23	89.5
WP_060571543.1\|22860_23259_-	hypothetical protein	R4ICD6	Listeria_phage	7.8e-39	100.0
WP_060571544.1\|23255_23462_-	hypothetical protein	NA	NA	NA	NA
WP_060571545.1\|23458_23638_-	hypothetical protein	A0A059T5G0	Listeria_phage	3.2e-24	96.6
WP_060571546.1\|23634_23943_-	hypothetical protein	NA	NA	NA	NA
WP_023553782.1\|23954_24485_-	hypothetical protein	A0A059T5F9	Listeria_phage	3.5e-87	86.4
WP_003733679.1\|24481_25396_-	DnaD domain-containing protein	A0A0B5D175	Listeria_phage	8.4e-129	84.9
WP_003723965.1\|25433_26345_-	recombinase RecT	A0A2H4JA23	uncultured_Caudovirales_phage	6.8e-38	40.5
WP_003723967.1\|26337_27849_-	hypothetical protein	A0A2I7SC81	Paenibacillus_phage	6.1e-76	36.2
WP_003722564.1\|28081_28270_-	hypothetical protein	Q9T175	Listeria_phage	1.8e-22	82.3
WP_003733681.1\|28372_28579_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_060571547.1\|28568_29099_-	hypothetical protein	A8ATY1	Listeria_phage	4.0e-83	93.6
WP_015987419.1\|29220_29994_-	phage repressor protein/antirepressor Ant	A8ATY0	Listeria_phage	1.1e-140	100.0
WP_003731223.1\|30057_30600_+	hypothetical protein	A8ATX9	Listeria_phage	2.8e-95	100.0
WP_003731222.1\|30577_30931_-	hypothetical protein	A8ATX8	Listeria_phage	9.9e-54	100.0
WP_015987418.1\|30927_31164_-	hypothetical protein	A8ATX7	Listeria_phage	1.1e-37	100.0
WP_003733687.1\|31175_31370_-	hypothetical protein	A0A059T6E5	Listeria_phage	1.4e-25	95.3
WP_003733688.1\|31390_31600_-	helix-turn-helix domain-containing protein	A0A0B5D0D3	Listeria_phage	3.5e-30	95.6
WP_003724014.1\|31765_32188_+	helix-turn-helix transcriptional regulator	A0A0B5CYL9	Listeria_phage	7.7e-69	98.6
WP_003724015.1\|32203_32629_+	ImmA/IrrE family metallo-endopeptidase	A0A0B5CTZ7	Listeria_phage	2.2e-76	100.0
WP_003724016.1\|32643_33351_+	hypothetical protein	A0A0B5CTT6	Listeria_phage	2.8e-124	100.0
WP_003724017.1\|33409_34015_+	hypothetical protein	NA	NA	NA	NA
WP_003724018.1\|34077_35241_+\|integrase	site-specific integrase	S5MNZ2	Brevibacillus_phage	4.4e-50	31.2
35258:35270	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr_ID: NZ_JNGJ01000028.1|WP_015987418.1|30927_31164_-|hypothetical-protein

Click the colored protein region to show detailed information

Acr_ID: NZ_JNGJ01000028.1|WP_003733687.1|31175_31370_-|hypothetical-protein

Click the colored protein region to show detailed information

Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_JNGJ01000028.1|WP_015987418.1|30927_31164_-|hypothetical-protein

30927_31164_-

78 aa aa

HTH_XRE

Identity	Hit_domain_coverage
0.43103448275862066	1.0

0-35241

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location
NZ_JNGJ01000024_1	TypeII	1.4\|5452\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	5452-5481	30	21149-21120
NZ_JNGJ01000024_1	TypeII	1.31\|7236\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7236-7265	30	14326-14297
NZ_JNGJ01000024_1	TypeII	1.35\|7236\|29\|NZ_JNGJ01000024\|PILER-CR	7236-7264	29	14326-14298

1. spacer 1.4|5452|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NZ_JNGJ01000028 position: 21149-21120, mismatch: 0

aacaagaaaaaagatccagacaatattgca	CRISPR spacer
aacaagaaaaaagatccagacaatattgca	Protospacer
******************************

2. spacer 1.31|7236|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NZ_JNGJ01000028 position: 14326-14297, mismatch: 0

tcaaaagcgcgcatgaggaagaaatcacga	CRISPR spacer
tcaaaagcgcgcatgaggaagaaatcacga	Protospacer
******************************

3. spacer 1.35|7236|29|NZ_JNGJ01000024|PILER-CR matches to NZ_JNGJ01000028 position: 14326-14298, mismatch: 0

tcaaaagcgcgcatgaggaagaaatcacg	CRISPR spacer
tcaaaagcgcgcatgaggaagaaatcacg	Protospacer
*****************************

NZ_JNGJ01000028.1|WP_003733687.1|31175_31370_-|hypothetical-protein

31175_31370_-

64 aa aa

HTH_XRE

Identity	Hit_domain_coverage
0.43103448275862066	1.0

0-35241

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location
NZ_JNGJ01000024_1	TypeII	1.4\|5452\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	5452-5481	30	21149-21120
NZ_JNGJ01000024_1	TypeII	1.31\|7236\|30\|NZ_JNGJ01000024\|CRISPRCasFinder,CRT	7236-7265	30	14326-14297
NZ_JNGJ01000024_1	TypeII	1.35\|7236\|29\|NZ_JNGJ01000024\|PILER-CR	7236-7264	29	14326-14298

1. spacer 1.4|5452|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NZ_JNGJ01000028 position: 21149-21120, mismatch: 0

aacaagaaaaaagatccagacaatattgca	CRISPR spacer
aacaagaaaaaagatccagacaatattgca	Protospacer
******************************

2. spacer 1.31|7236|30|NZ_JNGJ01000024|CRISPRCasFinder,CRT matches to NZ_JNGJ01000028 position: 14326-14297, mismatch: 0

tcaaaagcgcgcatgaggaagaaatcacga	CRISPR spacer
tcaaaagcgcgcatgaggaagaaatcacga	Protospacer
******************************

3. spacer 1.35|7236|29|NZ_JNGJ01000024|PILER-CR matches to NZ_JNGJ01000028 position: 14326-14298, mismatch: 0

tcaaaagcgcgcatgaggaagaaatcacg	CRISPR spacer
tcaaaagcgcgcatgaggaagaaatcacg	Protospacer
*****************************

8. NZ_JNGJ01000011

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

152442 : 159865

Hokovirus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003721506.1\|152442_152826_+	glycerol-3-phosphate cytidylyltransferase	A0A1V0SGE7	Hokovirus	1.4e-16	40.7
WP_014600722.1\|152847_153831_+	glycosyltransferase family 2 protein	A0A1V0SAH6	Catovirus	3.1e-12	35.3
WP_014930875.1\|153845_154859_+	glycosyltransferase	A0A1V0SAH6	Catovirus	6.0e-11	32.0
WP_003721509.1\|155067_156558_+	nicotinate phosphoribosyltransferase	G3MA18	Bacillus_virus	9.5e-114	49.7
WP_003727000.1\|156569_157394_+	ammonia-dependent NAD(+) synthetase	G3MA24	Bacillus_virus	9.7e-68	52.6
WP_014600724.1\|157406_157715_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
WP_003732712.1\|157775_158180_+	PTS sugar transporter subunit IIB	NA	NA	NA	NA
WP_014600725.1\|158308_159865_+	glutamine-hydrolyzing GMP synthase	A0A1V0SH76	Hokovirus	2.3e-17	28.1

DBSCAN-SWA_2

246544 : 309789

Listeria_phage(89.47%)

tail,tRNA,capsid,integrase,portal,terminase,holin,protease

attL 253820:253836|attR 291101:291117

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003736387.1\|246544_247597_+\|tRNA	phenylalanine--tRNA ligase subunit alpha	A0A2I2L4E3	Orpheovirus	2.1e-27	36.0
WP_014600775.1\|247596_250005_+\|tRNA	phenylalanine--tRNA ligase subunit beta	NA	NA	NA	NA
WP_014600776.1\|250165_250867_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.0e-33	35.4
WP_014600777.1\|250880_254291_+	FtsX-like permease family protein	NA	NA	NA	NA
253820:253836	attL	NA	NA	NA	NA
WP_003721623.1\|254388_254841_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_014600778.1\|254856_258057_+	MMPL family transporter	NA	NA	NA	NA
WP_003732773.1\|258163_258838_+	uracil-DNA glycosylase	A0A172DS90	Canid_alphaherpesvirus	7.5e-50	47.7
WP_072215733.1\|258875_259802_-	ribonuclease HIII	NA	NA	NA	NA
WP_022741830.1\|259955_260219_+	cell division protein ZapA	NA	NA	NA	NA
WP_012951513.1\|260218_260761_+	CvpA family protein	NA	NA	NA	NA
WP_003723851.1\|260853_262566_+	DNA polymerase/3'-5' exonuclease PolX	A0A2H4UV14	Bodo_saltans_virus	5.1e-18	24.8
WP_010989713.1\|262588_264946_+	endonuclease MutS2	Q94M10	Lactobacillus_phage	1.0e-21	50.4
WP_003723853.1\|265026_265338_+	thioredoxin	A0A1X9I9P5	Staphylococcus_phage	5.4e-19	39.6
WP_014600780.1\|265413_267225_+	excinuclease ABC subunit UvrC	NA	NA	NA	NA
WP_003732778.1\|267414_268629_+	aspartate kinase	NA	NA	NA	NA
WP_003733801.1\|268684_269179_-	YslB family protein	NA	NA	NA	NA
WP_003723856.1\|269326_270127_+	glutamate racemase	NA	NA	NA	NA
WP_003732780.1\|270139_270886_+	ribonuclease PH	NA	NA	NA	NA
WP_014600781.1\|270889_271501_+	XTP/dITP diphosphatase	NA	NA	NA	NA
WP_014600782.1\|271537_272065_+	metallophosphoesterase	NA	NA	NA	NA
WP_060571514.1\|272354_273509_-\|integrase	site-specific integrase	A0A059T688	Listeria_phage	7.4e-215	98.2
WP_060571515.1\|273642_274257_-	hypothetical protein	A0A059T7Z1	Listeria_phage	2.2e-101	98.0
WP_060571516.1\|274307_274760_-	ImmA/IrrE family metallo-endopeptidase	A0A059T7S0	Listeria_phage	1.3e-82	98.0
WP_015987308.1\|274776_275097_-	helix-turn-helix transcriptional regulator	A0A059T6G1	Listeria_phage	2.1e-55	100.0
WP_009929536.1\|275363_275567_+	helix-turn-helix transcriptional regulator	A0A059T5F8	Listeria_phage	3.1e-28	100.0
WP_015987310.1\|275568_275811_+	hypothetical protein	A8ATD2	Listeria_phage	1.4e-43	100.0
WP_009929539.1\|275813_275999_+	hypothetical protein	A0A059T7Z3	Listeria_phage	1.7e-28	96.7
WP_009931096.1\|276233_276386_+	hypothetical protein	A0A059T7S2	Listeria_phage	3.4e-19	98.0
WP_055310976.1\|276522_276777_+	hypothetical protein	Q8W5X5	Listeria_phage	3.3e-35	93.9
WP_176714913.1\|276794_276962_+	hypothetical protein	A8ASN5	Listeria_phage	2.0e-20	94.4
WP_055310977.1\|276977_277259_+	hypothetical protein	A0A059T7N1	Listeria_phage	9.1e-42	90.2
WP_060571517.1\|277255_277720_+	class I SAM-dependent methyltransferase	A0A059T693	Listeria_phage	7.3e-89	99.4
WP_014601511.1\|277716_278277_+	DUF1642 domain-containing protein	A8ATY9	Listeria_phage	9.4e-107	100.0
WP_014929526.1\|278273_278420_+	hypothetical protein	A8ATZ0	Listeria_phage	1.7e-20	100.0
WP_047923936.1\|278497_278899_+	hypothetical protein	A8ATD9	Listeria_phage	3.1e-67	91.0
WP_014601509.1\|278895_279105_+	hypothetical protein	A8ATE0	Listeria_phage	1.7e-32	100.0
WP_003731704.1\|279105_279435_+	hypothetical protein	A8ATE1	Listeria_phage	1.1e-57	100.0
WP_003731705.1\|279431_279704_+	hypothetical protein	A8ATE2	Listeria_phage	2.0e-46	100.0
WP_031645563.1\|279700_279919_+	hypothetical protein	NA	NA	NA	NA
WP_023548953.1\|279915_280350_+	hypothetical protein	A8ATS7	Listeria_phage	2.5e-38	52.8
WP_015987316.1\|280382_280556_+	hypothetical protein	A8ATE7	Listeria_phage	3.1e-24	100.0
WP_015987318.1\|280552_280936_+	hypothetical protein	A8ATE8	Listeria_phage	2.5e-66	100.0
WP_023552345.1\|280937_281417_+	siphovirus Gp157 family protein	R4IBM0	Listeria_phage	2.7e-78	99.4
WP_010991282.1\|281429_282119_+	AAA family ATPase	R4IDY8	Listeria_phage	1.2e-130	100.0
WP_023552347.1\|282182_283439_+	DEAD/DEAH box helicase	R4IBK4	Listeria_phage	1.7e-225	97.7
WP_023552348.1\|283461_283944_+	DUF669 domain-containing protein	A8ATF2	Listeria_phage	1.3e-85	97.5
WP_039153561.1\|283966_286255_+	DNA primase	A8ATF3	Listeria_phage	0.0e+00	93.9
WP_012951539.1\|286588_286906_+	VRR-NUC domain-containing protein	A8ATF4	Listeria_phage	7.3e-48	89.3
WP_023552351.1\|286907_287120_+	hypothetical protein	NA	NA	NA	NA
WP_023552354.1\|287628_288162_+	DUF3310 domain-containing protein	A8ATF5	Listeria_phage	3.8e-73	76.0
WP_023552357.1\|288378_288606_+	hypothetical protein	NA	NA	NA	NA
WP_023552360.1\|288618_289044_+	DUF722 domain-containing protein	Q8W5V4	Listeria_phage	1.1e-67	91.5
WP_003731652.1\|289677_289992_+	HNH endonuclease	A8ATF8	Listeria_phage	3.2e-56	98.1
WP_060571518.1\|290040_290397_+\|terminase	P27 family phage terminase small subunit	A0A059T7Y1	Listeria_phage	7.7e-46	97.0
WP_060571519.1\|290393_292037_+\|terminase	terminase large subunit	A8AT95	Listeria_phage	0.0e+00	98.0
291101:291117	attR	NA	NA	NA	NA
WP_023548926.1\|292048_293179_+\|portal	phage portal protein	A8AT96	Listeria_phage	1.7e-203	93.1
WP_023548924.1\|293175_293973_+\|protease	Clp protease ClpP	A0A059T5F2	Listeria_phage	1.2e-136	95.1
WP_009917704.1\|293999_295151_+\|capsid	phage major capsid protein	A8AT98	Listeria_phage	7.2e-202	93.2
WP_023548922.1\|295157_295328_+	hypothetical protein	A8AT99	Listeria_phage	6.9e-21	94.6
WP_003731645.1\|295337_295637_+	hypothetical protein	A8ATA0	Listeria_phage	5.3e-48	100.0
WP_003731644.1\|295620_295986_+	hypothetical protein	A8ATA1	Listeria_phage	1.3e-64	100.0
WP_003731643.1\|295982_296384_+	hypothetical protein	A8ATA2	Listeria_phage	2.1e-68	100.0
WP_012581456.1\|296380_296764_+	hypothetical protein	A8ATA3	Listeria_phage	3.8e-67	100.0
WP_023548920.1\|296785_297373_+\|tail	phage tail protein	A8ATA4	Listeria_phage	1.5e-107	99.5
WP_023548918.1\|297444_297777_+	hypothetical protein	A8ATA5	Listeria_phage	4.3e-51	97.3
WP_003731639.1\|297827_297977_+	hypothetical protein	A0A059T6F4	Listeria_phage	6.7e-20	98.0
WP_060571520.1\|297991_302914_+\|tail	phage tail tape measure protein	A0A059T5F4	Listeria_phage	0.0e+00	96.8
WP_014929555.1\|302906_304556_+\|tail	phage tail family protein	A0A059T682	Listeria_phage	0.0e+00	99.6
WP_060571521.1\|304571_306866_+\|tail	phage tail protein	A0A059T7Y6	Listeria_phage	0.0e+00	98.8
WP_060571522.1\|306855_307947_+	hypothetical protein	A0A059T7R4	Listeria_phage	2.3e-189	91.5
WP_031643775.1\|307994_308447_+	hypothetical protein	A0A059T6F6	Listeria_phage	2.1e-72	93.2
WP_031643776.1\|308416_308821_+	hypothetical protein	Q8W5Z0	Listeria_phage	3.7e-44	75.4
WP_060571523.1\|308834_309101_+\|holin	phage holin	A0A059T684	Listeria_phage	6.1e-40	96.6
WP_149800482.1\|309100_309789_+	N-acetylmuramoyl-L-alanine amidase	A0A059T7X1	Listeria_phage	5.8e-90	85.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

9. NZ_JNGJ01000001

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

114101 : 124828

Listeria_phage(40.0%)

holin,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003721739.1\|114101_114554_-	ImmA/IrrE family metallo-endopeptidase	A0A059T7S0	Listeria_phage	4.0e-31	47.9
WP_003721740.1\|114559_114895_-	helix-turn-helix transcriptional regulator	A0A2H4JAR9	uncultured_Caudovirales_phage	4.0e-20	52.5
WP_003732219.1\|115111_115540_+	hypothetical protein	A8ATZ8	Listeria_phage	3.0e-12	45.7
WP_003732220.1\|115551_115968_+	hypothetical protein	NA	NA	NA	NA
WP_014600375.1\|116245_116635_+	DUF5072 family protein	NA	NA	NA	NA
WP_003721744.1\|116647_117160_+\|tail	phage major tail protein, TP901-1 family	A0A097PBF4	Streptococcus_pyogenes_phage	1.2e-47	62.7
WP_003721745.1\|117207_117510_+	hypothetical protein	NA	NA	NA	NA
WP_009911444.1\|117551_117956_+	hypothetical protein	A0A097PAX1	Streptococcus_pyogenes_phage	1.1e-19	43.7
WP_014600377.1\|117942_119811_+	membrane protein	A0A097PAU2	Streptococcus_pyogenes_phage	3.5e-20	45.8
WP_003721748.1\|119807_120626_+\|tail	phage tail family protein	Q9T1A6	Listeria_phage	5.7e-44	35.5
WP_014600378.1\|120635_121772_+\|tail	phage tail protein	A0A0B5D0G3	Listeria_phage	1.0e-46	33.5
WP_003721751.1\|121761_122061_+	hypothetical protein	NA	NA	NA	NA
WP_009931689.1\|122075_122651_+	hypothetical protein	NA	NA	NA	NA
WP_009931691.1\|122665_123145_+	hypothetical protein	NA	NA	NA	NA
WP_003732226.1\|123141_123678_+	hypothetical protein	NA	NA	NA	NA
WP_003721755.1\|123696_124119_+\|holin	holin family protein	Q2I8E7	Bacillus_phage	1.1e-27	46.3
WP_010989349.1\|124099_124828_+	N-acetylmuramoyl-L-alanine amidase	A0A0N9SGH1	Paenibacillus_phage	5.6e-35	42.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

10. NZ_JNGJ01000027

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr_ID: NZ_JNGJ01000027.1|WP_003731276.1|739_991_+|hypothetical-protein

Click the colored protein region to show detailed information

Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_JNGJ01000027.1|WP_003731276.1|739_991_+|hypothetical-protein

739_991_+

83 aa aa

AcrIIA12

hit_Aca_id	identity	query_coverage	hit_coverage
anti_CRISPR3641\|WP_003731276.1\|AcrIIA12\|II-A\|Verified\|Listeria-monocytogenes	1.0	1	1.0