CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP013722	Listeria monocytogenes strain Lm 3163 chromosome, complete genome	5 crisprs	DEDDh,cas3,cas2,cas1,cas4,cas5,cas7,cas8b2,cas6,casR,WYL,DinG,csa3,cas9,csn2	3	45	7	2

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP013722_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP013722_1

976133-979019

Unclear

I-A

Consensus_repeat	Method
ATTTACATTTCATAATAAGTAGTTAAAAC	CRISPRCasFinder
ATTTACATTTCATAATAAGTAGTTAAAAC	CRT
ATTTACATTTCATAATAAGTAGTTAAAAC	PILER-CR

44 spacers

cas2,cas1,cas4,cas3,cas5,cas7,cas8b2,cas6

The CRISPR arrays of NZ_CP013722_1

>merge|NZ_CP013722|1|976133-979019|CRISPRCasFinder,CRT,PILER-CR
TTTATGATTTCATAATAAGTAGTTAAAACAATTACATAAAATCACTTTGCTAATTGCATAGTTTTTATTTACATTTCATAATAAGTAGTTAAAACATTTTTTTCATTTTCTAAGTCCTCATATTTCAAAAATTTACATTTCATAATAAGTAGTTAAAACTAAGATGTCCGATAATGAACACGCGTTCTCTGTTTTGATTTACATTTCATAATAAGTAGTTAAAACCTGGCAGGGATGTCAGCGAAACAATTCCAGAAAGCCATTTACATTTCATAATAAGTAGTTAAAACGGCATTGCGATTATTTCATGTCTTGCAGGGGTAGCTTATTTACATTTCATAATAAGTAGTTAAAACATATTTGACCGTGCCCGGTAAAACTACCGCAAACGTATTTACATTTCATAATAAGTAGTTAAAACCGCGCGCTATTTGCGCCATTTCTAGCATATCTTGATTTAGATTTCATAATAAGTAGTTAAAACTTGTTTGCTCCTGCATGCTTATCAACAAAAAATTTATTTACATTTCATAATAAGTAGTTAAAACCTTGCCAAGTTTTCTGGTCCAGCTTCCCATATTTCTATTTACATTTCATAATAAGTAGTTAAAACGTTCGCTTAAGACCTTGTCTATATAGCCTTTAATAACATTTACATTTCATAATAAGTAGTTAAAACCGCTGTAATTGACTTAATACTTGTGACGAATTCACCATTTACATTTCATAATAAGTAGTTAAAACACACATCTTGAAAAGTTCTTTTCTGTCCCGCTTCTAAATTTACATTTCATAATAAGTAGTTAAAACTACAAGGAATTGTAATGTCTGCTGGAACCAAACTGAATTTACATTTCATAATAAGTAGTTAAAACTCTTCTAAGCGATCTAAAAACTCTTTTTTAAACCAGATTTACATTTCATAATAAGTAGTTAAAACGAAGAAACAATTCAAGAACATACGGATAATTTATATTTACATTTCATAATAAGTAGTTAAAACAACCAAGTTATCACGGATGCTAACGTTATCTCTAAATTTACATTTCATAATAAGTAGTTAAAACAAATACAATCCGTGACTCTGTATTTAATAAAATCCAAATTTACATTTCATAATAAGTAGTTAAAACGAAAAGCAAAAAAACAAAGATAAGTTAGGTTTGCAAATTTACATTTCATAATAAGTAGTTAAAACTATATAATGATGTAGGAGTTATGAATATTTTGTATTAATTTACATTTCATAATAAGTAGTTAAAACAAAACTAGCGAATCAATACGGAATTAAGAATTACACATTTACATTTCATAATAAGTAGTTAAAACCCGTTCGCTCTGTAGAACAAAACTTCCCGGATTTCTTATTTACATTTCATAATAAGTAGTTAAAACGAAAAAAGCAGATACGGAAACAGGTGACACTGCTCAATTTACATTTCATAATAAGTAGTTAAAACTAATGACATCTGGTGATAAAATTGTTGAAAAAAGCATTTACATTTCATAATAAGTAGTTAAAACTACATGTCGTTTAACCCGCCTCGAAATCCTTATGAGATTTACATTTCATAATAAGTAGTTAAAACTCCAAACTCCTTCCGCACATTGGGCAATATTTTATAATTTACATTTCATAATAAGTAGTTAAAACTAAAGAAGCGTGATGGTTGTCTAAGCCGTCGAACAAATTTACATTTCATAATAAGTAGTTAAAACGCAAAACAACAAATTGGAAAGATGTTTTTTTTCTATTTACATTTCATAATAAGTAGTTAAAACTCATGTTGCAGGTGTAGAGCTAAATCCAAGTAGACTTATTTACATTTCATAATAAGTAGTTAAAACCGTGAACCTATTTATCAGAAACAACCTATCCAAAATTTACATTTCATAATAAGTAGTTAAAACATTGAGGTGTATTACTGTCGCCAGTTGAGTAACCAGATTTACATTTCATAATAAGTAGTTAAAACAAGTGATACAATGTGTTTTTTATTGTCGATGTGGACATTTACATTTCATAATAAGTAGTTAAAACCTCTACAATCAGTGCATTTCTTTCTTCCCATTTCCAATTTACATTTCATAATAAGTAGTTAAAACACACATATACAGCCATGAATATAGGAGATATGCACATTTACATTTCATAATAAGTAGTTAAAACCATGACTCCCTTAACATGTGCAAACACCATTTAAGAATTTACATTTCATAATAAGTAGTTAAAACGCGAGATAAGTTATATATAACAACTTCGCATTCCGCATTTACATTTCATAATAAGTAGTTAAAACAAATAGTGATACAGATAGTTTTGAGGTAAGTTATTAATTTACATTTCATAATAAGTAGTTAAAACAAAATGGACTTCTCCCGATGATTGGACAGCTCCGTTATTTACATTTCATAATAAGTAGTTAAAACCGGGTAATATACGTGTACTTATATAGGGGATATGTATTTACATTTCATAATAAGTAGTTAAAACTTAGATGATTCTTTCACTGGCTCTTTTTCTGGCTGATTTACATTTCATAATAAGTAGTTAAAACGCTTTTGTCAACATCCCGCTAAAACTTCTACACGGTTTATTTACATTTCATAATAAGTAGTTAAAACAGGTGCTTCACTATTTTCAGATACGACTTCTTTTTTATTTACATTTCATAATAAGTAGTTAAAACCGTTTTAAACAATTTGACCACTCCTACATTTTGATTTATTTACATTTCATAATAAGTAGTTAAAACAATGATGGTATTTGTAGCGTTGGTAGTATTGAGTGTATTTACATTTCATAATAAGTAGTTAAAACGGAAGTTCCTGGTAAATGCTTTTCATTAATTGCTGCAATTTACATTTCATAATAAGTAGTTAAAAC

>NZ_CP013722|1|1|976133-979019|CRISPRCasFinder
TTTATGATTTCATAATAAGTAGTTAAAAC	AATTACATAAAATCACTTTGCTAATTGCATAGTTTTT
ATTTACATTTCATAATAAGTAGTTAAAAC	ATTTTTTTCATTTTCTAAGTCCTCATATTTCAAAA
ATTTACATTTCATAATAAGTAGTTAAAAC	TAAGATGTCCGATAATGAACACGCGTTCTCTGTTTTG
ATTTACATTTCATAATAAGTAGTTAAAAC	CTGGCAGGGATGTCAGCGAAACAATTCCAGAAAGCC
ATTTACATTTCATAATAAGTAGTTAAAAC	GGCATTGCGATTATTTCATGTCTTGCAGGGGTAGCTT
ATTTACATTTCATAATAAGTAGTTAAAAC	ATATTTGACCGTGCCCGGTAAAACTACCGCAAACGT
ATTTACATTTCATAATAAGTAGTTAAAAC	CGCGCGCTATTTGCGCCATTTCTAGCATATCTTG
ATTTAGATTTCATAATAAGTAGTTAAAAC	TTGTTTGCTCCTGCATGCTTATCAACAAAAAATTT
ATTTACATTTCATAATAAGTAGTTAAAAC	CTTGCCAAGTTTTCTGGTCCAGCTTCCCATATTTCT
ATTTACATTTCATAATAAGTAGTTAAAAC	GTTCGCTTAAGACCTTGTCTATATAGCCTTTAATAAC
ATTTACATTTCATAATAAGTAGTTAAAAC	CGCTGTAATTGACTTAATACTTGTGACGAATTCACC
ATTTACATTTCATAATAAGTAGTTAAAAC	ACACATCTTGAAAAGTTCTTTTCTGTCCCGCTTCTAA
ATTTACATTTCATAATAAGTAGTTAAAAC	TACAAGGAATTGTAATGTCTGCTGGAACCAAACTGA
ATTTACATTTCATAATAAGTAGTTAAAAC	TCTTCTAAGCGATCTAAAAACTCTTTTTTAAACCAG
ATTTACATTTCATAATAAGTAGTTAAAAC	GAAGAAACAATTCAAGAACATACGGATAATTTAT
ATTTACATTTCATAATAAGTAGTTAAAAC	AACCAAGTTATCACGGATGCTAACGTTATCTCTAA
ATTTACATTTCATAATAAGTAGTTAAAAC	AAATACAATCCGTGACTCTGTATTTAATAAAATCCAA
ATTTACATTTCATAATAAGTAGTTAAAAC	GAAAAGCAAAAAAACAAAGATAAGTTAGGTTTGCAA
ATTTACATTTCATAATAAGTAGTTAAAAC	TATATAATGATGTAGGAGTTATGAATATTTTGTATTA
ATTTACATTTCATAATAAGTAGTTAAAAC	AAAACTAGCGAATCAATACGGAATTAAGAATTACAC
ATTTACATTTCATAATAAGTAGTTAAAAC	CCGTTCGCTCTGTAGAACAAAACTTCCCGGATTTCTT
ATTTACATTTCATAATAAGTAGTTAAAAC	GAAAAAAGCAGATACGGAAACAGGTGACACTGCTCA
ATTTACATTTCATAATAAGTAGTTAAAAC	TAATGACATCTGGTGATAAAATTGTTGAAAAAAGC
ATTTACATTTCATAATAAGTAGTTAAAAC	TACATGTCGTTTAACCCGCCTCGAAATCCTTATGAG
ATTTACATTTCATAATAAGTAGTTAAAAC	TCCAAACTCCTTCCGCACATTGGGCAATATTTTATA
ATTTACATTTCATAATAAGTAGTTAAAAC	TAAAGAAGCGTGATGGTTGTCTAAGCCGTCGAACAA
ATTTACATTTCATAATAAGTAGTTAAAAC	GCAAAACAACAAATTGGAAAGATGTTTTTTTTCT
ATTTACATTTCATAATAAGTAGTTAAAAC	TCATGTTGCAGGTGTAGAGCTAAATCCAAGTAGACTT
ATTTACATTTCATAATAAGTAGTTAAAAC	CGTGAACCTATTTATCAGAAACAACCTATCCAAA
ATTTACATTTCATAATAAGTAGTTAAAAC	ATTGAGGTGTATTACTGTCGCCAGTTGAGTAACCAG
ATTTACATTTCATAATAAGTAGTTAAAAC	AAGTGATACAATGTGTTTTTTATTGTCGATGTGGAC
ATTTACATTTCATAATAAGTAGTTAAAAC	CTCTACAATCAGTGCATTTCTTTCTTCCCATTTCCA
ATTTACATTTCATAATAAGTAGTTAAAAC	ACACATATACAGCCATGAATATAGGAGATATGCAC
ATTTACATTTCATAATAAGTAGTTAAAAC	CATGACTCCCTTAACATGTGCAAACACCATTTAAGA
ATTTACATTTCATAATAAGTAGTTAAAAC	GCGAGATAAGTTATATATAACAACTTCGCATTCCGC
ATTTACATTTCATAATAAGTAGTTAAAAC	AAATAGTGATACAGATAGTTTTGAGGTAAGTTATTA
ATTTACATTTCATAATAAGTAGTTAAAAC	AAAATGGACTTCTCCCGATGATTGGACAGCTCCGTT
ATTTACATTTCATAATAAGTAGTTAAAAC	CGGGTAATATACGTGTACTTATATAGGGGATATGT
ATTTACATTTCATAATAAGTAGTTAAAAC	TTAGATGATTCTTTCACTGGCTCTTTTTCTGGCTG
ATTTACATTTCATAATAAGTAGTTAAAAC	GCTTTTGTCAACATCCCGCTAAAACTTCTACACGGTTT
ATTTACATTTCATAATAAGTAGTTAAAAC	AGGTGCTTCACTATTTTCAGATACGACTTCTTTTTT
ATTTACATTTCATAATAAGTAGTTAAAAC	CGTTTTAAACAATTTGACCACTCCTACATTTTGATTT
ATTTACATTTCATAATAAGTAGTTAAAAC	AATGATGGTATTTGTAGCGTTGGTAGTATTGAGTGT
ATTTACATTTCATAATAAGTAGTTAAAAC	GGAAGTTCCTGGTAAATGCTTTTCATTAATTGCTGCA
ATTTACATTTCATAATAAGTAGTTAAAAC

>NZ_CP013722|1|1|976133-979019|CRT
TTTATGATTTCATAATAAGTAGTTAAAAC	AATTACATAAAATCACTTTGCTAATTGCATAGTTTTT
ATTTACATTTCATAATAAGTAGTTAAAAC	ATTTTTTTCATTTTCTAAGTCCTCATATTTCAAAA
ATTTACATTTCATAATAAGTAGTTAAAAC	TAAGATGTCCGATAATGAACACGCGTTCTCTGTTTTG
ATTTACATTTCATAATAAGTAGTTAAAAC	CTGGCAGGGATGTCAGCGAAACAATTCCAGAAAGCC
ATTTACATTTCATAATAAGTAGTTAAAAC	GGCATTGCGATTATTTCATGTCTTGCAGGGGTAGCTT
ATTTACATTTCATAATAAGTAGTTAAAAC	ATATTTGACCGTGCCCGGTAAAACTACCGCAAACGT
ATTTACATTTCATAATAAGTAGTTAAAAC	CGCGCGCTATTTGCGCCATTTCTAGCATATCTTG
ATTTAGATTTCATAATAAGTAGTTAAAAC	TTGTTTGCTCCTGCATGCTTATCAACAAAAAATTT
ATTTACATTTCATAATAAGTAGTTAAAAC	CTTGCCAAGTTTTCTGGTCCAGCTTCCCATATTTCT
ATTTACATTTCATAATAAGTAGTTAAAAC	GTTCGCTTAAGACCTTGTCTATATAGCCTTTAATAAC
ATTTACATTTCATAATAAGTAGTTAAAAC	CGCTGTAATTGACTTAATACTTGTGACGAATTCACC
ATTTACATTTCATAATAAGTAGTTAAAAC	ACACATCTTGAAAAGTTCTTTTCTGTCCCGCTTCTAA
ATTTACATTTCATAATAAGTAGTTAAAAC	TACAAGGAATTGTAATGTCTGCTGGAACCAAACTGA
ATTTACATTTCATAATAAGTAGTTAAAAC	TCTTCTAAGCGATCTAAAAACTCTTTTTTAAACCAG
ATTTACATTTCATAATAAGTAGTTAAAAC	GAAGAAACAATTCAAGAACATACGGATAATTTAT
ATTTACATTTCATAATAAGTAGTTAAAAC	AACCAAGTTATCACGGATGCTAACGTTATCTCTAA
ATTTACATTTCATAATAAGTAGTTAAAAC	AAATACAATCCGTGACTCTGTATTTAATAAAATCCAA
ATTTACATTTCATAATAAGTAGTTAAAAC	GAAAAGCAAAAAAACAAAGATAAGTTAGGTTTGCAA
ATTTACATTTCATAATAAGTAGTTAAAAC	TATATAATGATGTAGGAGTTATGAATATTTTGTATTA
ATTTACATTTCATAATAAGTAGTTAAAAC	AAAACTAGCGAATCAATACGGAATTAAGAATTACAC
ATTTACATTTCATAATAAGTAGTTAAAAC	CCGTTCGCTCTGTAGAACAAAACTTCCCGGATTTCTT
ATTTACATTTCATAATAAGTAGTTAAAAC	GAAAAAAGCAGATACGGAAACAGGTGACACTGCTCA
ATTTACATTTCATAATAAGTAGTTAAAAC	TAATGACATCTGGTGATAAAATTGTTGAAAAAAGC
ATTTACATTTCATAATAAGTAGTTAAAAC	TACATGTCGTTTAACCCGCCTCGAAATCCTTATGAG
ATTTACATTTCATAATAAGTAGTTAAAAC	TCCAAACTCCTTCCGCACATTGGGCAATATTTTATA
ATTTACATTTCATAATAAGTAGTTAAAAC	TAAAGAAGCGTGATGGTTGTCTAAGCCGTCGAACAA
ATTTACATTTCATAATAAGTAGTTAAAAC	GCAAAACAACAAATTGGAAAGATGTTTTTTTTCT
ATTTACATTTCATAATAAGTAGTTAAAAC	TCATGTTGCAGGTGTAGAGCTAAATCCAAGTAGACTT
ATTTACATTTCATAATAAGTAGTTAAAAC	CGTGAACCTATTTATCAGAAACAACCTATCCAAA
ATTTACATTTCATAATAAGTAGTTAAAAC	ATTGAGGTGTATTACTGTCGCCAGTTGAGTAACCAG
ATTTACATTTCATAATAAGTAGTTAAAAC	AAGTGATACAATGTGTTTTTTATTGTCGATGTGGAC
ATTTACATTTCATAATAAGTAGTTAAAAC	CTCTACAATCAGTGCATTTCTTTCTTCCCATTTCCA
ATTTACATTTCATAATAAGTAGTTAAAAC	ACACATATACAGCCATGAATATAGGAGATATGCAC
ATTTACATTTCATAATAAGTAGTTAAAAC	CATGACTCCCTTAACATGTGCAAACACCATTTAAGA
ATTTACATTTCATAATAAGTAGTTAAAAC	GCGAGATAAGTTATATATAACAACTTCGCATTCCGC
ATTTACATTTCATAATAAGTAGTTAAAAC	AAATAGTGATACAGATAGTTTTGAGGTAAGTTATTA
ATTTACATTTCATAATAAGTAGTTAAAAC	AAAATGGACTTCTCCCGATGATTGGACAGCTCCGTT
ATTTACATTTCATAATAAGTAGTTAAAAC	CGGGTAATATACGTGTACTTATATAGGGGATATGT
ATTTACATTTCATAATAAGTAGTTAAAAC	TTAGATGATTCTTTCACTGGCTCTTTTTCTGGCTG
ATTTACATTTCATAATAAGTAGTTAAAAC	GCTTTTGTCAACATCCCGCTAAAACTTCTACACGGTTT
ATTTACATTTCATAATAAGTAGTTAAAAC	AGGTGCTTCACTATTTTCAGATACGACTTCTTTTTT
ATTTACATTTCATAATAAGTAGTTAAAAC	CGTTTTAAACAATTTGACCACTCCTACATTTTGATTT
ATTTACATTTCATAATAAGTAGTTAAAAC	AATGATGGTATTTGTAGCGTTGGTAGTATTGAGTGT
ATTTACATTTCATAATAAGTAGTTAAAAC	GGAAGTTCCTGGTAAATGCTTTTCATTAATTGCTGCA
ATTTACATTTCATAATAAGTAGTTAAAAC

>NZ_CP013722|1|1|976199-979019|PILER-CR
ATTTACATTTCATAATAAGTAGTTAAAAC	ATTTTTTTCATTTTCTAAGTCCTCATATTTCAAAA
ATTTACATTTCATAATAAGTAGTTAAAAC	TAAGATGTCCGATAATGAACACGCGTTCTCTGTTTTG
ATTTACATTTCATAATAAGTAGTTAAAAC	CTGGCAGGGATGTCAGCGAAACAATTCCAGAAAGCC
ATTTACATTTCATAATAAGTAGTTAAAAC	GGCATTGCGATTATTTCATGTCTTGCAGGGGTAGCTT
ATTTACATTTCATAATAAGTAGTTAAAAC	ATATTTGACCGTGCCCGGTAAAACTACCGCAAACGT
ATTTACATTTCATAATAAGTAGTTAAAAC	CGCGCGCTATTTGCGCCATTTCTAGCATATCTTG
ATTTAGATTTCATAATAAGTAGTTAAAAC	TTGTTTGCTCCTGCATGCTTATCAACAAAAAATTT
ATTTACATTTCATAATAAGTAGTTAAAAC	CTTGCCAAGTTTTCTGGTCCAGCTTCCCATATTTCT
ATTTACATTTCATAATAAGTAGTTAAAAC	GTTCGCTTAAGACCTTGTCTATATAGCCTTTAATAAC
ATTTACATTTCATAATAAGTAGTTAAAAC	CGCTGTAATTGACTTAATACTTGTGACGAATTCACC
ATTTACATTTCATAATAAGTAGTTAAAAC	ACACATCTTGAAAAGTTCTTTTCTGTCCCGCTTCTAA
ATTTACATTTCATAATAAGTAGTTAAAAC	TACAAGGAATTGTAATGTCTGCTGGAACCAAACTGA
ATTTACATTTCATAATAAGTAGTTAAAAC	TCTTCTAAGCGATCTAAAAACTCTTTTTTAAACCAG
ATTTACATTTCATAATAAGTAGTTAAAAC	GAAGAAACAATTCAAGAACATACGGATAATTTAT
ATTTACATTTCATAATAAGTAGTTAAAAC	AACCAAGTTATCACGGATGCTAACGTTATCTCTAA
ATTTACATTTCATAATAAGTAGTTAAAAC	AAATACAATCCGTGACTCTGTATTTAATAAAATCCAA
ATTTACATTTCATAATAAGTAGTTAAAAC	GAAAAGCAAAAAAACAAAGATAAGTTAGGTTTGCAA
ATTTACATTTCATAATAAGTAGTTAAAAC	TATATAATGATGTAGGAGTTATGAATATTTTGTATTA
ATTTACATTTCATAATAAGTAGTTAAAAC	AAAACTAGCGAATCAATACGGAATTAAGAATTACAC
ATTTACATTTCATAATAAGTAGTTAAAAC	CCGTTCGCTCTGTAGAACAAAACTTCCCGGATTTCTT
ATTTACATTTCATAATAAGTAGTTAAAAC	GAAAAAAGCAGATACGGAAACAGGTGACACTGCTCA
ATTTACATTTCATAATAAGTAGTTAAAAC	TAATGACATCTGGTGATAAAATTGTTGAAAAAAGC
ATTTACATTTCATAATAAGTAGTTAAAAC	TACATGTCGTTTAACCCGCCTCGAAATCCTTATGAG
ATTTACATTTCATAATAAGTAGTTAAAAC	TCCAAACTCCTTCCGCACATTGGGCAATATTTTATA
ATTTACATTTCATAATAAGTAGTTAAAAC	TAAAGAAGCGTGATGGTTGTCTAAGCCGTCGAACAA
ATTTACATTTCATAATAAGTAGTTAAAAC	GCAAAACAACAAATTGGAAAGATGTTTTTTTTCT
ATTTACATTTCATAATAAGTAGTTAAAAC	TCATGTTGCAGGTGTAGAGCTAAATCCAAGTAGACTT
ATTTACATTTCATAATAAGTAGTTAAAAC	CGTGAACCTATTTATCAGAAACAACCTATCCAAA
ATTTACATTTCATAATAAGTAGTTAAAAC	ATTGAGGTGTATTACTGTCGCCAGTTGAGTAACCAG
ATTTACATTTCATAATAAGTAGTTAAAAC	AAGTGATACAATGTGTTTTTTATTGTCGATGTGGAC
ATTTACATTTCATAATAAGTAGTTAAAAC	CTCTACAATCAGTGCATTTCTTTCTTCCCATTTCCA
ATTTACATTTCATAATAAGTAGTTAAAAC	ACACATATACAGCCATGAATATAGGAGATATGCAC
ATTTACATTTCATAATAAGTAGTTAAAAC	CATGACTCCCTTAACATGTGCAAACACCATTTAAGA
ATTTACATTTCATAATAAGTAGTTAAAAC	GCGAGATAAGTTATATATAACAACTTCGCATTCCGC
ATTTACATTTCATAATAAGTAGTTAAAAC	AAATAGTGATACAGATAGTTTTGAGGTAAGTTATTA
ATTTACATTTCATAATAAGTAGTTAAAAC	AAAATGGACTTCTCCCGATGATTGGACAGCTCCGTT
ATTTACATTTCATAATAAGTAGTTAAAAC	CGGGTAATATACGTGTACTTATATAGGGGATATGT
ATTTACATTTCATAATAAGTAGTTAAAAC	TTAGATGATTCTTTCACTGGCTCTTTTTCTGGCTG
ATTTACATTTCATAATAAGTAGTTAAAAC	GCTTTTGTCAACATCCCGCTAAAACTTCTACACGGTTT
ATTTACATTTCATAATAAGTAGTTAAAAC	AGGTGCTTCACTATTTTCAGATACGACTTCTTTTTT
ATTTACATTTCATAATAAGTAGTTAAAAC	CGTTTTAAACAATTTGACCACTCCTACATTTTGATTT
ATTTACATTTCATAATAAGTAGTTAAAAC	AATGATGGTATTTGTAGCGTTGGTAGTATTGAGTGT
ATTTACATTTCATAATAAGTAGTTAAAAC	GGAAGTTCCTGGTAAATGCTTTTCATTAATTGCTGCA
ATTTACATTTCATAATAAGTAGTTAAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP013722.1\|WP_058876329.1\|964368_965832_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013722.1\|WP_031671650.1\|968434_970096_+\|SulP-family-inorganic-anion-transporter	unknown	unknown	gnl\|CDD\|223732
NZ_CP013722.1\|WP_003733179.1\|966847_968179_-\|DUF1254-domain-containing-protein	unknown	unknown	gnl\|CDD\|227659
NZ_CP013722.1\|WP_003721320.1\|966061_966802_+\|MerR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|133381
NZ_CP013722.1\|WP_014600555.1\|970141_970585_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013722.1\|WP_058876330.1\|971645_972962_+\|6-phospho-beta-glucosidase	unknown	unknown	gnl\|CDD\|133432
NZ_CP013722.1\|WP_039120367.1\|981003_983211_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_CP013722.1\|WP_003727296.1\|975692_976061_+\|DUF1304-domain-containing-protein	unknown	unknown	gnl\|CDD\|226282
NZ_CP013722.1\|WP_058876334.1\|986601_987324_-\|CRISPR-associated-endoribonuclease-Cas6	cas6	pfam01881_cas6_CAS-I:CAS-III	gnl\|CDD\|273848
NZ_CP013722.1\|WP_058876333.1\|984897_986586_-\|type-I-B-CRISPR-associated-protein-Cas8b1/Cst1	cas8b2	cd09754_cas8b2_CAS-I-B	gnl\|CDD\|187884
NZ_CP013722.1\|WP_031644454.1\|974129_975545_-\|multidrug-efflux-MFS-transporter	unknown	unknown	gnl\|CDD\|129794
NZ_CP013722.1\|WP_003721316.1\|970690_971443_-\|MurR/RpiR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224651
NZ_CP013722.1\|WP_003721307.1\|983278_984061_-\|type-I-B-CRISPR-associated-protein-Cas5	cas5	cd09658_cas5_CAS-I-B	gnl\|CDD\|273860
NZ_CP013722.1\|WP_009925355.1\|980501_980990_-\|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl\|CDD\|366863
NZ_CP013722.1\|WP_058876332.1\|984038_984908_-\|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	cas7	cd09687_cas7_CAS-I-B	gnl\|CDD\|274215
NZ_CP013722.1\|WP_058876335.1\|988612_990043_+\|CapA-family-protein	unknown	unknown	gnl\|CDD\|225399
NZ_CP013722.1\|WP_003721303.1\|987676_988492_+\|histidine-phosphatase-family-protein	unknown	unknown	gnl\|CDD\|223483
NZ_CP013722.1\|WP_039120417.1\|979499_980489_-\|type-I-B-CRISPR-associated-endonuclease-Cas1	cas1	cd09722_cas1_CAS-I-B	gnl\|CDD\|274695
NZ_CP013722.1\|WP_003721310.1\|979216_979495_-\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_CP013722.1\|WP_077947094.1\|972993_973998_-\|ROK-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224851

Protein	Function_ID	Function_description	E-value
NZ_CP013722.1\|WP_003721307.1\|983278_984061_-\|type-I-B-CRISPR-associated-protein-Cas5	gnl\|CDD\|273860	TIGR01895, conserved_hypothetical_protein, CRISPR-associated protein Cas5, subtype I-B/TNEAP. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. This family is represented by TM1800 from Thermotoga maritima. It is related to TIGR01868 (CRISPR-associated protein, CT1976 family).	1.37797e-23
NZ_CP013722.1\|WP_031671650.1\|968434_970096_+\|SulP-family-inorganic-anion-transporter	gnl\|CDD\|223732	COG0659, SUL1, Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism].	1.06019e-147
NZ_CP013722.1\|WP_003733179.1\|966847_968179_-\|DUF1254-domain-containing-protein	gnl\|CDD\|227659	COG5361, COG5361, Uncharacterized conserved protein [Function unknown].	5.0797e-74
NZ_CP013722.1\|WP_003721320.1\|966061_966802_+\|MerR-family-transcriptional-regulator	gnl\|CDD\|133381	cd01106, HTH_TipAL-Mta, Helix-Turn-Helix DNA binding domain of the transcription regulators TipAL, Mta, and SkgA. Helix-turn-helix (HTH) TipAL, Mta, and SkgA transcription regulators, and related proteins, N-terminal domain. TipAL regulates resistance to and activation by numerous cyclic thiopeptide antibiotics, such as thiostrepton. Mta is a global transcriptional regulator; the N-terminal DNA-binding domain of Mta interacts directly with the promoters of mta, bmr, blt, and ydfK, and induces transcription of these multidrug-efflux transport genes. SkgA has been shown to control stationary-phase expression of catalase-peroxidase in Caulobacter crescentus. These proteins are comprised of distinct domains that harbor an N-terminal active (DNA-binding) site and a regulatory (effector-binding) site. The conserved N-terminal domain of these transcription regulators contains winged HTH motifs that mediate DNA binding. These proteins share the N-terminal DNA binding domain with other transcription regulators of the MerR superfamily that promote transcription by reconfiguring the spacer between the -35 and -10 promoter elements. Unique to this family, is a TipAL-like, lineage specific Bacilli subgroup, which has five conserved cysteines in the C-terminus of the protein.	2.56491e-51
NZ_CP013722.1\|WP_058876335.1\|988612_990043_+\|CapA-family-protein	gnl\|CDD\|225399	COG2843, PgsA, Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation) [Cell envelope biogenesis, outer membrane].	3.02736e-100
NZ_CP013722.1\|WP_058876330.1\|971645_972962_+\|6-phospho-beta-glucosidase	gnl\|CDD\|133432	cd05296, GH4_P_beta_glucosidase, Glycoside Hydrolases Family 4; Phospho-beta-glucosidase. Some bacteria simultaneously translocate and phosphorylate disaccharides via the phosphoenolpyruvate-dependent phosphotransferase system (PEP-PTS). After translocation, these phospho-disaccharides may be hydrolyzed by the GH4 glycoside hydrolases such as the phospho-beta-glucosidases. Other organisms (such as archaea and Thermotoga maritima ) lack the PEP-PTS system, but have several enzymes normally associated with the PEP-PTS operon. The 6-phospho-beta-glucosidase from Thermotoga maritima hydrolylzes cellobiose 6-phosphate (6P) into glucose-6P and glucose, in an NAD+ and Mn2+ dependent fashion. The Escherichia coli 6-phospho-beta-glucosidase (also called celF) hydrolyzes a variety of phospho-beta-glucosides including cellobiose-6P, salicin-6P, arbutin-6P, and gentobiose-6P. Phospho-beta-glucosidases are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.	0
NZ_CP013722.1\|WP_039120367.1\|981003_983211_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	1.50319e-61
NZ_CP013722.1\|WP_003727296.1\|975692_976061_+\|DUF1304-domain-containing-protein	gnl\|CDD\|226282	COG3759, COG3759, Predicted membrane protein [Function unknown].	2.33548e-41
NZ_CP013722.1\|WP_058876334.1\|986601_987324_-\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|273848	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This broadly distributed, highly divergent Cas family is now characterized as an endoribonuclease that generates guide RNAs for host defense against phage and other invaders. The family contains a C-terminal motif GXGXXXXXGXG, where the each X between two Gly is hydrophobic and the spacer XXXXX contains (usually) one Arg or Lys. The seed alignment for the current version of this model has gappy columns removed. Members of this protein family are found associated with several different CRISPR/cas system subtypes, and consequently we designate this family Cas6.	2.75155e-33
NZ_CP013722.1\|WP_003721303.1\|987676_988492_+\|histidine-phosphatase-family-protein	gnl\|CDD\|223483	COG0406, phoE, Broad specificity phosphatase PhoE and related phosphatases [General function prediction only].	5.01016e-50
NZ_CP013722.1\|WP_031644454.1\|974129_975545_-\|multidrug-efflux-MFS-transporter	gnl\|CDD\|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	4.42897e-80
NZ_CP013722.1\|WP_003721316.1\|970690_971443_-\|MurR/RpiR-family-transcriptional-regulator	gnl\|CDD\|224651	COG1737, RpiR, Transcriptional regulators [Transcription].	5.24308e-64
NZ_CP013722.1\|WP_058876333.1\|984897_986586_-\|type-I-B-CRISPR-associated-protein-Cas8b1/Cst1	gnl\|CDD\|187884	cd09754, Cas8a1_I-A, CRISPR/Cas system-associated protein Cas8a1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins, some contain Zn-finger domain; signature gene for I-A subtype; also known as CXXC_CXXC family.	5.84432e-26
NZ_CP013722.1\|WP_009925355.1\|980501_980990_-\|CRISPR-associated-protein-Cas4	gnl\|CDD\|366863	pfam01930, Cas_Cas4, Domain of unknown function DUF83. This domain has no known function. The domain contains three conserved cysteines at its C-terminus.	3.69311e-59
NZ_CP013722.1\|WP_058876332.1\|984038_984908_-\|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	gnl\|CDD\|274215	TIGR02585, conserved_protein, CRISPR-associated protein Cas7/Cst2/DevR, subtype I-B/TNEAP. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. This clade is a member of the DevR family (TIGR01875) and includes the DevR protein of Myxococcus xanthus, a protein whose expression appears to be regulated through a number of means, including both location and autorepression; DevR mutants are incapable of fruiting body development.	5.29899e-56
NZ_CP013722.1\|WP_039120417.1\|979499_980489_-\|type-I-B-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274695	TIGR03641, cas1_HMARI, CRISPR-associated endonuclease Cas1, subtype I-B/HMARI/TNEAP. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes Cas1 subgroup that includes Cas1 proteins of the related HMARI and TNEAP subtypes of CRISPR/Cas system.	1.03751e-163
NZ_CP013722.1\|WP_003721310.1\|979216_979495_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	5.1393e-30
NZ_CP013722.1\|WP_077947094.1\|972993_973998_-\|ROK-family-transcriptional-regulator	gnl\|CDD\|224851	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism].	1.32103e-20

>NZ_CP013722.1|WP_003727296.1|975692_976061_+|DUF1304-domain-containing-protein
MAILAFILTFIVMIEHIYIMILEMFFANTKLAAKTFGVEKELLANKKVQTLFANQGLYNGFLAAGLVWGLFFAGAGFAETVQIFFLSCVVVAALFGGATSSKGILVKQGLPAVLALVAVLLV
>NZ_CP013722.1|WP_031644454.1|974129_975545_-|multidrug-efflux-MFS-transporter
MQQEATGGQKIRPIPIIASFLMAGFIGLFSETALNMALSDLIQVFDISSATVQWLTTGYLLTLGILVPISGLLLQWFTTRGLFFTAVSFSIAGTLIAALSPTFAMLMIGRVVQAVGTALLLPLMFNTILLIFPEHKRGSAMGMIGLVIMFAPAVGPTISGLILENLTWNWIFWISLPFLIIALLFGMKFMQNVSVVTKPKIDILSIILSTLGFGGVVFAFSSAGESGWGSATVLVSIIVGGLALGLFVWRQLTMEKPLMDLKVFKYPMFTLGLILVFISFMMILSTMILLPLYLQNSLALAAFSAGLVLLPGGVLNGLMSPFTGRLFDAYGPRALVIPGFIVAVVALFFLTRIEVGTSALTIIVLHSVLMIGISMVMMPAQTNGLNQLPPKLYPDGTAIMNTLQQVSGAIGTAVAITIMSAGQKAYMETAQGMGPEQMVASLTAGIQNAFVFGLIMACIGLLCSLFIRKAK
>NZ_CP013722.1|WP_077947094.1|972993_973998_-|ROK-family-transcriptional-regulator
MAIPRDLKELNKKNIKSILRQQGAMTKAEIAEVTGLSVVTVNKLIRDLVENEEILEQDNSVATGGRRAVSYEINPNFQQVLVISLQEKWKKITYSFSVYNLLGEPEFVEDMSGEDLDITALKRNTKDIICAFPKISCVVIGVPGIEIGGKLRAMDFPLLLNVQLRETLEAEVNLPVLVETDTNAAILGYKNRPVKEENIVGLYYPERFPPGAGLLMNGEILKGQNGLAGEIKHMPLQVDWDKFDFSVDEIKAHIRKMVLLAMSFYDPETIVLYTNFYFGQKDFTEELTEELKRVYPYAVLPEIVLSRKFTTDYRIGLLAFGIDYLENNMTDWRI
>NZ_CP013722.1|WP_058876330.1|971645_972962_+|6-phospho-beta-glucosidase
MTKGIKIATIGGGSSYTPELIEGFIKRQDELPVRELWLVDVEAGREKLEIVGNLAKRMVKKAGVNLEIHLTLDREEALKDADFVTTQLRVGLLDARVKDERIPNSYGVVGQETNGPGGMFKGLRTIPVILDICKDMERLCPDAWLINFANPAGMVTEAVLRYSNQKKVVGLCNGPIGIERNIAETLGVDVSEIYVEFVGLNHMVFAKTVYHNGKDVTKDVVFKMTEDEAGSSLKNINATGWDKTFLRTLNMIPIDYLRYYWQTKQQLEDQARAYAEHGTRAEVVKKVEAELFELYKQEELAEKPKQLEQRGGAYYSEAACNLINSIYNDKRDIQIVNTRNNGAILDIDPDSAVETNCVITRQGPIPLASGRLPIAINGIIQEIKTFERLTAEAAVTGDYDKALLAMTINPLTPSESVAREMLDELLEAHKEYLPNFFK
>NZ_CP013722.1|WP_003721316.1|970690_971443_-|MurR/RpiR-family-transcriptional-regulator
MLFLDKNLELNDTELDIYNYIVANLDKVVYMRIRDLATEAHVSTTTILRFCRKFGCNGFSEFRVKLQLYLEEQKLAQIDMADETTYIDFLKRTAQPEFKAQIQNAVEILRDRELVLFAGVGSSGVIAEYGAIYFSSLFTLALHIEDPLNHPFYHLSSKLSDKICMIAISVEGENEDIIRYIHQLKAQNCKVISITNSAKSTIARLSDANIAYYINKEMYQEANITSQLPALYTIENIAREIRTQLDKEKM
>NZ_CP013722.1|WP_014600555.1|970141_970585_-|hypothetical-protein
MYSNMKEKVVFTLIMCSLMILCMSSYNILLENGIGTDSLMIILKAFVPFLFIGFLLDFFVVGKIANRLHALLVSEDASKFKKIIMMQLLMVTFMCVLMSTLSLIVNQGEWSHLGILILRNYFVALFLQIFIVSPFVRLISPRIFALL
>NZ_CP013722.1|WP_031671650.1|968434_970096_+|SulP-family-inorganic-anion-transporter
MFKHILLSLNGYKISYLRNDVISGVGVAALTIPVAMGYAQVAGLPPIYGLYASFLPVIAYVIFASSPQLIFGIDATASAITGSIILGTAGLAAGSKEAIALAPILAFFCAIFLVLFSVLKLGRFAKYISAPVLSGFISGLSVSIIMGQIPKIMGLKESGDSFFSSLGIIFGQFFQSNWISFAMGVVTVIIVITCKKVIPKIPMSLVVLVLGTMAAYFFKLDQYNVDIVGKIPVGFPSLALPDFGASSWALAIGGGLVCAIATFAGSLLPSESFAMRNKYTIDDNRELFAYGVSNFVAAFSGCSPASASVSRTAANEQFRGKTQMVSIVAATIIALIVAFLSGLLYYMPQPVLSGIVFAALVGIIDVDVLKGLFKVSRREATVWIVAALGTLLVGVIFGVLLGIFLSFINVVSRSMKTPIAILGVIEGRHGYFDLKRKPEAKPIPNVVIYRYSASLFFGNFNKFADGLKEAVQDDTKLVIFEASAIINIDTTATESMKDLLKWLDDKGIEYYFADLIDHLKTSFRKHDLGYLIDNGYTKKTVEDALDAYYAEHK
>NZ_CP013722.1|WP_003733179.1|966847_968179_-|DUF1254-domain-containing-protein
MATQKNLVDLATKAYIYGFPFIFNTQQIERYVTVGIGGTKQVPFNNFTHASRLAEPSDKFVSVNNDTIYSNAPIDVSAGPVVLSVPDTSGRYYVLQFVDAWSNNFAYVGKRATGTSAGKFLLTPPNWNGDVPADMIEIKFPTNIGIIIGRLACDGEADLPTVRELQEQLKITPLNEGKEVDGFPEYDRSLGKELAFFEQLRVYMAQFPPAERDLVKQESFAPIGLMEKGVSPYSNPSEELKNALIEGAKAGLANIKKATTNFKSENGWGLTQHLFDYNADFFEIGTKKSLDWVIEDREEAYIIRAVSAITALWGNHGYEAVYLMTWTDTDGNALNGKNKYTLELNPIPPVDSFWSITMYDLPEYFLCENPINRYSIGDRTPGIQYNDDGGITIVVSKDEPTDPKERANWLPAPDAEFRPMFRLYNPQQPLVDGSYHFPGFEKK
>NZ_CP013722.1|WP_003721320.1|966061_966802_+|MerR-family-transcriptional-regulator
MQIKELAELTGVSVRTLHHYDKIGLLVPQKDDWNGYRIYSEKDVDKLQQILFFKELDFPLKKIQQILDDPLFDKNVALDMQRHLLIEKKQRIETMLATLDLTIKNEKGEITMTNKEKFTGFDFSSNPYEEEARKLWGDKVVEKANEKVNNMSEKEQLTLKESFDAEFRHLASVRKLTPESEEAQLEIDHFFHYLNDTHGNIYSLEAFASLGEMYVNDERFTKNIDQFGDGLSQFLQEAMTIYAKNK
>NZ_CP013722.1|WP_058876329.1|964368_965832_-|hypothetical-protein
MIRKVKSISMWLWHHLTPQIFAVICVFIITIIALFMPPYIGMADNGDFFRIFSSNGLFVNNTNYDALQFGHFVKEFGIYQYFNENQVAIYSSQSIFIQMALLLNKLFWSTTVFDVRFLGGLQLALLLPAIYLLVAGLTAKMKGWPGYVVAALTVFIFADTAYTAYFNSFFSEGLILIMMLYISAGFLLLYQHKYNDYAMLGLIFVASLILITAKQQNAPIAVVIAVCGILVFFIRKNRAFRISAAATFLVIFLSGVVMYAFIPGEFVTINQYQTMTRGVLLDSENPEKSLEEMGMNSEFALLKGTNFYQKYKMIDLDSKLMEKEFYPNYNFVTVLSYYLENPKQFGKMLDLSAQNSFSIRPFEMGNFEKATGYKFKEKTHFFSAYSDVKEKFAPAKFTFLILWALVFLICYGVSAFKHFREKNIRGTLLFDLIVLLIGSGFAVILVTIVGDGEADLTKHNFLFNVCFDLTMLIGAASLLEVYLKKRG
>NZ_CP013722.1|WP_003721310.1|979216_979495_-|CRISPR-associated-endonuclease-Cas2
MYVILIYDISIENGGAKVWRNVFKICKKYLTHVQKSVFEGEITPALLVKLRMELDKYIRDDQDSVIVFSSRQQRWLEKEFWGLTDEKTSNFF
>NZ_CP013722.1|WP_039120417.1|979499_980489_-|type-I-B-CRISPR-associated-endonuclease-Cas1
MESYYLFSDGELKRKDNVIRLTAPDGRFKDLKVELTRDIFLFGEVTMNTKGLNYIGQLGIPVHIFNYYGFYSGSYYPRETNVSGQLLISQVEHYTDTEKRQLIACQFIEAASFNLLRNLKYYKQRGKDVSNEIDEIKFLRKSICKMNDIPSLMGIEGNIRKVYYEAWQKIINQKIDFEKRVKRPPDNMVNTLISYVNSLVYSSCLTEIYKTQLNPVISYLHSAGERRFSLCLDVAEIFKPLIADRIIFSLLNKNIITEDDFEKEANFCYMKKAARQKVLQAYDLRMKETIKHRDLGRNVSYRHLIRLECYKLVKHLMNDKEYEAFKIWW
>NZ_CP013722.1|WP_009925355.1|980501_980990_-|CRISPR-associated-protein-Cas4
MRISGTHVYYYFVCKRKLWCFSKEIRMEHLDENVQLGKLLDESSYNREKGQVMIDETVNIDFIKDWKVLHEVKKSKAIEEAGIWQLKYYMYFLKQKGIIIEKGVVDYPKLRQRETIFLTTEDERKIEKILVDIEITTSSLKPPTIIDKPLCKKCAYYEYCYI
>NZ_CP013722.1|WP_039120367.1|981003_983211_-|CRISPR-associated-helicase/endonuclease-Cas3
MHKYLAKSNPEETIQEHTDNLLKNYQRLKKLYPAVEIDWYLLELVCLLHDLGKMNLLFQTKLGNASGKGKEIPHGYLSVAFVPDSKLEEMGYSEDEIKVVYQAIARHHERKYDFSDSEWKKEIIKLEEQWAGFIYSQLGGNAEYSSEVEMLYFYPGSRIFEGNSAADAETFKKYVLLKGLLNRIDFAASGGIDVELENDFLMDSMEVQLSHFKAENPEADWNALQKYMMQHQNENIVVIAETGMGKTEAGLLWLGNNKGFFTLPLRAAINAIYERITKNIVTTNQAERVGLLHSETYSQYLLHEGNAEMDIDEYYTRTRQMSLPITICTLDQLFDFVFRYAGFEHKLATLSYSKVIIDEIQMYSSDLLAYLILGLSYIDKFGGKFCIMTATLPGIVTDLLLENGVDFVQPEDKFVSSRIRHSMEMVHTEIESEFIKPFFNNNRILVICNTISKAKKIYSELKEHFQGEEIHLIHSQFIKKDRSAKEDAIFKDGQKDSTKKCIWVATQVVEASLDIDFDLLFTELSDVNGLFQRMGRCYRNRALDVDTNVYVFDGGAKVCSGIGTFIDKLIFENSKTILNEHAGVLTEEKKMELVERVYSTEALRGSEFYNDLRKTINYVKAFDSYELDKADVRRRFRNINSVSVIPEEVWQDNVEEINSYFAILRKTSKEISTKEKMIARTNLAEFMVSIPDYLYKKGESVVREINRYESVIEFKCGYSDEIGIIMYEKQEDLFF
>NZ_CP013722.1|WP_003721307.1|983278_984061_-|type-I-B-CRISPR-associated-protein-Cas5
MLIMKAIRVRLWQDLVNFKKPTSFQLKETYPLPPYSTVIGMVHTLCGFTSYHEMKISIQGKYFSKVNDLATRYEFKNGMTYDASRHQIKVDKYGVSRGVSTVELLVDLELLLHIIPEDPSLVPIIEKAFREPIEFPSLGRREDIATIQKVEVVDVEKRQPKKSTEISDGYNAYVPISLTENNSVHFKSHESSVGRDKLLGTRYLLTEKYERVNHGTEKAPKFFRKWRKKDVIYSSRIFVSKKDVFFFDEDDYLVFIEEEE
>NZ_CP013722.1|WP_058876332.1|984038_984908_-|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR
MKNKGLAMTIIFQAESANYGESLGNISSLKKISRNNGDQYTYISRQAIRYDLMDQIGEKEAPVKAEGGGDKKVIQFLSEATITDFPELDFFGYLKTEKGSGGQKRSAKVRLSNAISLETFKGDLDFLTNKGQADKLNENMNIAQAEIHKSYYRYTITIDLDQIGIDGEIALDNKEKARRVKKLMDTVAFLYRDIRGRREDLKPLFVIGGVYDVKNPVFQNIVDVADNNIVIKNIKDLLTYEDIKENTRVGIIDGQFANSDEVKVELKAESVPAFFNDIKGKIDAYYESN
>NZ_CP013722.1|WP_058876333.1|984897_986586_-|type-I-B-CRISPR-associated-protein-Cas8b1/Cst1
MRTEIEVRANDWLINAGLTGFLNIVGKENVRIDGQSIYFTADLLEDFETKYFNFFIQEYKETLSWYKIVSYKETMEQFRIDEFASFDEVALGNLNKYMKDVVKFYLKKANYIKVFPLIDPSANVTKWLENLNTINLTKKQKWDEVKADIIEEVRQTYTQLDLIIDFCASEKGLQYLGAKNLIYSVINKGWSGVSFLFKQTKFIDPYLDYKTTFVDPVLEYLDTDLSKAKYNCFNCNQPIKNLKLDLSFMNDVGFDTARKTAHVWDFNNDVATCPICRLIYSCVPAGFTYVYGEGMFVNDSYGVEELHRVNERMRNSILRFNKDGINSTNTYRALVESITMEHENNRRYELADIQLVRYENEHYRFNLLSKKMLHIVNDSKGILKSLIRCGYKEGNLNVNLYKEVIQHLMNNENLFTLIHKLIYYKQTSVNGLYYNMGHVSGILDINTKFLKEMEVMTNISQNQLWFVQNCGKEFKEGYVKKKSENKISGITYKLLNSLKVNDKDGFMDTLLNSYSYLSMPIPDVFIKMFSNNEAFKSVGYAFMLGVGGEKTKKEDGGNTDEK
>NZ_CP013722.1|WP_058876334.1|986601_987324_-|CRISPR-associated-endoribonuclease-Cas6
MRLKINCDFDSKIIPKDFQSKVVSLFKAGIMKSSPERYENLFGGNKHKQYTFSVYLPKPQNKGAEIQLNEANCIINFSTGDAETGIIFYNALISLRGSKVLFGAGNHITVKNIQIVPEKKIIGKQTILRTLSPVVSRDHNRETFKNWFYSFEDEEFEPTLKRNMLPYLMDAFGEQARYDLEKLKITPISMKKVVVYCHEIHIESSVGIFELEAEAYLQKYLVENGLGTMTGSGFGMIEQL
>NZ_CP013722.1|WP_003721303.1|987676_988492_+|histidine-phosphatase-family-protein
MKKNIFKLLMALCAVLLIAGCGNSTSADKKETKETKEDGTVTFYVVRHGKTMLNTTDRVQGWSDAVLTPAGEEVVKSAGKGLKDVDFSAAYSSDSGRAIQTANLILKESDKSADKEVQTDPRFREFNFGSYEGDLNENMWTDIAKSQGKTLEEWQKAGLSPKDFANSVAALDKTRVKEGENWPAEDYATIQARLKEGLTDVAKKESKNGDSNVLLVSHGLSIGALLDTIEPGYKLPAEGIKNASVTKITYKDGKFTIGDVNDLSYVEKGSK
>NZ_CP013722.1|WP_058876335.1|988612_990043_+|CapA-family-protein
MKKLTYVIITGLVLVFIAGAFWITNSTNQSDQKATQTEPIKKISPANVKTISSEAKKTLNSLASSGADKASISDLKQLIKELKSYPTEKNDSGVYLQNLTACLEAVKSYTTGKADEKTLGKVYPAFLASEQKLSAIEKTNQYDWFYAAAATNQQGLKEKGVVTLTMVGDNSFGTYPETPEHLKFDNVFQKNNGNNTYVYKNCLPWFKSDDYTVINAESAFTNATKAENKKWRIKSDPAHVAFLPASGVEAANLANNHTMDYFQVGYDDTLKAFKENNIPVFNTDAPLETTIKGMKTVLLGYDCRMSQQSPAYLERIVKDVKKYKKEDTLVIVNMHWGVEYRETPTDYQTQFGHAILDAGADIIMGSHPHRLESVEKYKDKYIVYSMGDFAFGADPTLLSRMTSMFQLRFTKEDNKIVLKDISIVPTYENSDGSTTENNYQPLPVFGDDAKKIVDELNRISKPIEGGVTEYTYFDPF

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Crispr_ID: NZ_CP013722_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP013722_2

996714-997191

Unclear

I-A

Consensus_repeat	Method
ATTTACATTTCACAATAAGTAACTAAAA	PILER-CR
ATTTACATTTCACAATAAGTAACTAAAA	CRISPRCasFinder
ATTTACATTTCACAATAAGTAACTAAAAC	CRT

7 spacers

cas6

The CRISPR arrays of NZ_CP013722_2

>merge|NZ_CP013722|2|996714-997191|PILER-CR,CRISPRCasFinder,CRT
ATTTACATTTCACAATAAGTAACTAAAACGAAATTGTAAAATCTATATCCGTTGATTCAACAAAATTTACATTTCACAATAAGTAACTAAAACTTAATTTGATAGTCATAATTTATTTCCTCCTATTTTATTTACATTTCACAATAAGTAACTAAAATATAGAAAGGAGTTGATACAGTGAAGGATGTTTTAGATTTACATTTCACAATAAGTAACTAAAACTTATAAACGACATTTTAGAAGCAGGAGTAGAAAAATTTACATTTCACAATAAGTAACTAAAACTTGTAACCCATCGCTGTCCCTTTGACAAAAATCGCATTTACATTTCACAATAAGTAACTAAAACGCTACATGCTTGATGTGCTTTACACAAAAGAGAGCAATTTACATTTCACAATAAGTAACTAAAACGCCATTTACAATCACCCTTCCGGAGTTTGATCTGTATTTACATTTCACAATAAGTAACTAAAAC

>NZ_CP013722|2|2|996714-997190|PILER-CR
ATTTACATTTCACAATAAGTAACTAAAA	CGAAATTGTAAAATCTATATCCGTTGATTCAACAAA
ATTTACATTTCACAATAAGTAACTAAAA	CTTAATTTGATAGTCATAATTTATTTCCTCCTATTTT
ATTTACATTTCACAATAAGTAACTAAAA	TATAGAAAGGAGTTGATACAGTGAAGGATGTTTTAG
ATTTACATTTCACAATAAGTAACTAAAA	CTTATAAACGACATTTTAGAAGCAGGAGTAGAAAA
ATTTACATTTCACAATAAGTAACTAAAA	CTTGTAACCCATCGCTGTCCCTTTGACAAAAATCGC
ATTTACATTTCACAATAAGTAACTAAAA	CGCTACATGCTTGATGTGCTTTACACAAAAGAGAGCA
ATTTACATTTCACAATAAGTAACTAAAA	CGCCATTTACAATCACCCTTCCGGAGTTTGATCTGT
ATTTACATTTCACAATAAGTAACTAAAA

>NZ_CP013722|2|2|996714-997190|CRISPRCasFinder
ATTTACATTTCACAATAAGTAACTAAAA	CGAAATTGTAAAATCTATATCCGTTGATTCAACAAA
ATTTACATTTCACAATAAGTAACTAAAA	CTTAATTTGATAGTCATAATTTATTTCCTCCTATTTT
ATTTACATTTCACAATAAGTAACTAAAA	TATAGAAAGGAGTTGATACAGTGAAGGATGTTTTAG
ATTTACATTTCACAATAAGTAACTAAAA	CTTATAAACGACATTTTAGAAGCAGGAGTAGAAAA
ATTTACATTTCACAATAAGTAACTAAAA	CTTGTAACCCATCGCTGTCCCTTTGACAAAAATCGC
ATTTACATTTCACAATAAGTAACTAAAA	CGCTACATGCTTGATGTGCTTTACACAAAAGAGAGCA
ATTTACATTTCACAATAAGTAACTAAAA	CGCCATTTACAATCACCCTTCCGGAGTTTGATCTGT
ATTTACATTTCACAATAAGTAACTAAAA

>NZ_CP013722|2|2|996714-997191|CRT
ATTTACATTTCACAATAAGTAACTAAAAC	GAAATTGTAAAATCTATATCCGTTGATTCAACAAA
ATTTACATTTCACAATAAGTAACTAAAAC	TTAATTTGATAGTCATAATTTATTTCCTCCTATTTT
ATTTACATTTCACAATAAGTAACTAAAAT	ATAGAAAGGAGTTGATACAGTGAAGGATGTTTTAG
ATTTACATTTCACAATAAGTAACTAAAAC	TTATAAACGACATTTTAGAAGCAGGAGTAGAAAA
ATTTACATTTCACAATAAGTAACTAAAAC	TTGTAACCCATCGCTGTCCCTTTGACAAAAATCGC
ATTTACATTTCACAATAAGTAACTAAAAC	GCTACATGCTTGATGTGCTTTACACAAAAGAGAGCA
ATTTACATTTCACAATAAGTAACTAAAAC	GCCATTTACAATCACCCTTCCGGAGTTTGATCTGT
ATTTACATTTCACAATAAGTAACTAAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP013722.1\|WP_012951243.1\|1005487_1006138_-\|transaldolase	unknown	unknown	gnl\|CDD\|223254
NZ_CP013722.1\|WP_058876336.1\|1003318_1005379_-\|BglG-family-transcription-antiterminator	unknown	unknown	gnl\|CDD\|226234
NZ_CP013722.1\|WP_003721297.1\|994955_995636_-\|type-1-glutamine-amidotransferase	unknown	unknown	gnl\|CDD\|153212
NZ_CP013722.1\|WP_003733191.1\|1002217_1002685_-\|PTS-sugar-transporter-subunit-IIA	unknown	unknown	gnl\|CDD\|238129
NZ_CP013722.1\|WP_058876335.1\|988612_990043_+\|CapA-family-protein	unknown	unknown	gnl\|CDD\|225399
NZ_CP013722.1\|WP_097294552.1\|993727_994866_-\|IS3-like-element-ISLmo1-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP013722.1\|WP_009932856.1\|992838_993297_+\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|378956
NZ_CP013722.1\|WP_012951245.1\|1001141_1001792_-\|ribulose-phosphate-3-epimerase	unknown	unknown	gnl\|CDD\|223114
NZ_CP013722.1\|WP_058876334.1\|986601_987324_-\|CRISPR-associated-endoribonuclease-Cas6	cas6	pfam01881_cas6_CAS-I:CAS-III	gnl\|CDD\|273848
NZ_CP013722.1\|WP_003721301.1\|990089_990521_-\|universal-stress-protein	unknown	unknown	gnl\|CDD\|366180
NZ_CP013722.1\|WP_003721303.1\|987676_988492_+\|histidine-phosphatase-family-protein	unknown	unknown	gnl\|CDD\|223483
NZ_CP013722.1\|WP_031671646.1\|990621_992457_-\|lmo0514-family-class-1-internalin	unknown	unknown	gnl\|CDD\|380190
NZ_CP013722.1\|WP_003721294.1\|998503_999775_-\|PTS-galactitol-transporter-subunit-IIC	unknown	unknown	gnl\|CDD\|226298
NZ_CP013722.1\|WP_003721298.1\|993303_993663_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|131113
NZ_CP013722.1\|WP_009930754.1\|995743_996322_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013722.1\|WP_003730559.1\|1000098_1001145_-\|galactitol-1-phosphate-5-dehydrogenase	unknown	unknown	gnl\|CDD\|176198
NZ_CP013722.1\|WP_003727301.1\|999789_1000083_-\|PTS-sugar-transporter-subunit-IIB	unknown	unknown	gnl\|CDD\|99908
NZ_CP013722.1\|WP_003733192.1\|1002712_1003315_-\|SIS-domain-containing-protein	unknown	unknown	gnl\|CDD\|223865
NZ_CP013722.1\|WP_003721295.1\|997428_998364_-\|ribose-phosphate-pyrophosphokinase	unknown	unknown	gnl\|CDD\|234929
NZ_CP013722.1\|WP_009924745.1\|1001802_1002201_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP013722.1\|WP_012951243.1\|1005487_1006138_-\|transaldolase	gnl\|CDD\|223254	COG0176, MipB, Transaldolase [Carbohydrate transport and metabolism].	1.0547e-61
NZ_CP013722.1\|WP_058876336.1\|1003318_1005379_-\|BglG-family-transcription-antiterminator	gnl\|CDD\|226234	COG3711, BglG, Transcriptional antiterminator [Transcription].	4.15986e-80
NZ_CP013722.1\|WP_003721297.1\|994955_995636_-\|type-1-glutamine-amidotransferase	gnl\|CDD\|153212	cd01741, GATase1_1, Subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain. This group contains a subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain. GATase activity catalyses the transfer of ammonia from the amide side chain of glutamine to an acceptor substrate. Glutamine amidotransferases (GATase) includes the triad family of amidotransferases which have a conserved Cys-His-Glu catalytic triad in the glutaminase active site. In this subgroup this triad is conserved. GATase activity can be found in a range of biosynthetic enzymes, including: glutamine amidotransferase, formylglycinamide ribonucleotide, GMP synthetase , anthranilate synthase component II, glutamine-dependent carbamoyl phosphate synthase, cytidine triphosphate synthetase, gamma-glutamyl hydrolase, imidazole glycerol phosphate synthase and, cobyric acid synthase. Glutamine amidotransferase (GATase) domains can occur either as single polypeptides, as in glutamine amidotransferases, or as domains in a much larger multifunctional synthase protein, such as CPSase.	7.71833e-60
NZ_CP013722.1\|WP_003733191.1\|1002217_1002685_-\|PTS-sugar-transporter-subunit-IIA	gnl\|CDD\|238129	cd00211, PTS_IIA_fru, PTS_IIA, PTS system, fructose/mannitol specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIA PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation.	2.76446e-37
NZ_CP013722.1\|WP_058876335.1\|988612_990043_+\|CapA-family-protein	gnl\|CDD\|225399	COG2843, PgsA, Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation) [Cell envelope biogenesis, outer membrane].	3.02736e-100
NZ_CP013722.1\|WP_097294552.1\|993727_994866_-\|IS3-like-element-ISLmo1-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	3.45157e-40
NZ_CP013722.1\|WP_009932856.1\|992838_993297_+\|MarR-family-transcriptional-regulator	gnl\|CDD\|378956	pfam12802, MarR_2, MarR family. The Mar proteins are involved in the multiple antibiotic resistance, a non-specific resistance system. The expression of the mar operon is controlled by a repressor, MarR. A large number of compounds induce transcription of the mar operon. This is thought to be due to the compound binding to MarR, and the resulting complex stops MarR binding to the DNA. With the MarR repression lost, transcription of the operon proceeds. The structure of MarR is known and shows MarR as a dimer with each subunit containing a winged-helix DNA binding motif.	9.15558e-13
NZ_CP013722.1\|WP_012951245.1\|1001141_1001792_-\|ribulose-phosphate-3-epimerase	gnl\|CDD\|223114	COG0036, Rpe, Pentose-5-phosphate-3-epimerase [Carbohydrate transport and metabolism].	8.25352e-108
NZ_CP013722.1\|WP_058876334.1\|986601_987324_-\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|273848	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This broadly distributed, highly divergent Cas family is now characterized as an endoribonuclease that generates guide RNAs for host defense against phage and other invaders. The family contains a C-terminal motif GXGXXXXXGXG, where the each X between two Gly is hydrophobic and the spacer XXXXX contains (usually) one Arg or Lys. The seed alignment for the current version of this model has gappy columns removed. Members of this protein family are found associated with several different CRISPR/cas system subtypes, and consequently we designate this family Cas6.	2.75155e-33
NZ_CP013722.1\|WP_003721301.1\|990089_990521_-\|universal-stress-protein	gnl\|CDD\|366180	pfam00582, Usp, Universal stress protein family. The universal stress protein UspA is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. UspA enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae UspA reveals an alpha/beta fold similar to that of the Methanococcus jannaschii MJ0577 protein, which binds ATP, though UspA lacks ATP-binding activity.	4.03126e-27
NZ_CP013722.1\|WP_003721303.1\|987676_988492_+\|histidine-phosphatase-family-protein	gnl\|CDD\|223483	COG0406, phoE, Broad specificity phosphatase PhoE and related phosphatases [General function prediction only].	5.01016e-50
NZ_CP013722.1\|WP_031671646.1\|990621_992457_-\|lmo0514-family-class-1-internalin	gnl\|CDD\|380190	NF033186, internalin_K, class 1 internalin InlK. Internalins, as found in the intracellular human pathogen Listeria monocytogenes, are paralogous surface-anchored proteins with an N-terminal signal peptide, leucine-rich repeats, and a C-terminal LPXTG processing and cell surface anchoring site. Members of this family are internalin K (InlK), a virulence factor. See articles PMID:17764999. for a general discussion of internalins, and PMID:21829365, PMID:22082958, and PMID:23958637 for more information about internalin K.	5.4558e-120
NZ_CP013722.1\|WP_003721294.1\|998503_999775_-\|PTS-galactitol-transporter-subunit-IIC	gnl\|CDD\|226298	COG3775, GatC, Phosphotransferase system, galactitol-specific IIC component [Carbohydrate transport and metabolism].	7.01085e-178
NZ_CP013722.1\|WP_003721298.1\|993303_993663_+\|hypothetical-protein	gnl\|CDD\|131113	TIGR02058, lin0512_fam, conserved hypothetical protein. This family consists of few members, broadly distributed. It occurs so far in several Firmicutes (twice in Oceanobacillus), one Cyanobacterium, one alpha Proteobacterium, and (with a long prefix) in plants. The function is unknown. The alignment includes a perfectly conserved motif GxGxDxHG near the N-terminus. [Hypothetical proteins, Conserved].	5.62162e-67
NZ_CP013722.1\|WP_003733192.1\|1002712_1003315_-\|SIS-domain-containing-protein	gnl\|CDD\|223865	COG0794, GutQ, Predicted sugar phosphate isomerase involved in capsule formation [Cell envelope biogenesis, outer membrane].	1.15952e-75
NZ_CP013722.1\|WP_003730559.1\|1000098_1001145_-\|galactitol-1-phosphate-5-dehydrogenase	gnl\|CDD\|176198	cd08236, sugar_DH, NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Horse liver alcohol dehydrogenase is a dimeric enzyme and each subunit has two domains. The NAD binding domain is in a Rossmann fold and the catalytic domain contains a zinc ion to which substrates bind. There is a cleft between the domains that closes upon formation of the ternary complex.	0
NZ_CP013722.1\|WP_003727301.1\|999789_1000083_-\|PTS-sugar-transporter-subunit-IIB	gnl\|CDD\|99908	cd05566, PTS_IIB_galactitol, PTS_IIB_galactitol: subunit IIB of enzyme II (EII) of the galactitol-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS). In this system, EII is a galactitol-specific permease with two cytoplasmic domains (IIA and IIB) and a transmembrane channel IIC domain that are expressed on three distinct polypeptide chains, in contrast to other PTS sugar transporters. The three genes encoding these subunits (gatA, gatB, and gatC) comprise the gatCBA operon. Galactitol PTS permease takes up exogenous galactitol, releasing the phosphate ester into the cytoplasm in preparation for oxidation and further metabolism via a modified glycolytic pathway called the tagatose-6-phosphate glycolytic pathway. The IIB domain fold includes a central four-stranded parallel open twisted beta-sheet flanked by alpha-helices on both sides. The seven major PTS systems with this IIB fold include galactitol, chitobiose/lichenan, ascorbate, lactose, mannitol, fructose, and a sensory system with similarity to the bacterial bgl system.	3.39912e-27
NZ_CP013722.1\|WP_003721295.1\|997428_998364_-\|ribose-phosphate-pyrophosphokinase	gnl\|CDD\|234929	PRK01259, PRK01259, ribose-phosphate diphosphokinase.	2.38027e-153

>NZ_CP013722.1|WP_009930754.1|995743_996322_-|hypothetical-protein
MKKILVPILLLATILASCSSPNEKITKDTKISKTITIRADYKVPKDIKELEDDSANIVKVKFLQNKTIGKDGSTISEIEILTSYKGNLEKGSKVDISEPWYLSDGKYVAVENYIALDKEQEYTIFLGEKDKDTYPLSSLGYGKFGGSLKEDQAVLADFNILGEVQKFDFISENTEEVKNYQLIKEQVAGKYK
>NZ_CP013722.1|WP_003721297.1|994955_995636_-|type-1-glutamine-amidotransferase
MIIDVLQHVPHEGPGLIANWARENQHQLKIHSLFEENAHVPNDSDFLIVLGGPMGINDTAEFPWLKDERKLIKRLSEQHKPVFGVCLGAQQIAATFGSEITVNKEKEVGWFPVKRTSDKLLFFPESLNVFHWHQDTFALPTGSTRLFASEGCLNQAFLYGENIIGLQFHFEMEKAGIETILRIDEAFITPGKYVQSVEVMREKDVPEDNKQMLEAILDYLINPKTI
>NZ_CP013722.1|WP_097294552.1|993727_994866_-|IS3-like-element-ISLmo1-family-transposase
MSTRVMYPAEIKEKAIKMKLAGKSTKEIMRTLHIKNPTQVKTWWRWYRNEETHRFHQGVGKQYKYQKGVPELPEIEQLKIALRQKELELEIFKKVQGIGKEVNPAYFVLLVEELKTKYLVKDICQILQVPLSTYYRWKKKDFAQSSLEKKIGQLCKAYQFTYGYRKIAALMKQEEQVGINKVQRIMQKYQWQCQVKVKKKNRPGSAYYQTENHLNRNFQASQPLEKLTTDITYLYFGDCRLYLSSIMDLYNGEIVAYSIGEKQDTELVLDTLNQLSLPEGSLLHSDQGSVYTSYEYYQCCKKKNVIRSMSRKGTPADNAPIECFHSSLKCETFYHKTAYKYAKSIVIQIVKDYIKYYNEKRIQQKLGYQSPINFRKQAA
>NZ_CP013722.1|WP_003721298.1|993303_993663_+|hypothetical-protein
MEQILFIQTGFGVDVHGQNITKAAERAVRNAIFTNSMPGIQGLLPDGDLQNMVVNIKLALPCDADQLDEDTIRAIIPYGTVTIEKMAGGMMTTSGIFLEDKEDKNDLMYIVNASVETGY
>NZ_CP013722.1|WP_009932856.1|992838_993297_+|MarR-family-transcriptional-regulator
MNNEQNMNQQIALFYFGYKAFTETADLIIAKHSLKRLHHRILFFTARMPGLTINELLTFLEISKQALHQPLAELKERELLTIEQGRRDKRQRCIFLTSAGKELENELGAAQRKQMSEIFTNSADTDGMHFTEVMEGYAKNRPGAAFIKDFKE
>NZ_CP013722.1|WP_031671646.1|990621_992457_-|lmo0514-family-class-1-internalin
MKKALKLFLAMICMFIMIYPSTAAHAEETNIVNIPDANLKTYLNGLLKQASDAPITKTQMNTIQTVTLSGSTYTDLTGLEEAGNLVTLSINNTNIQTLEPIKNQTSLTYLTVGGDNVKDSLFVDLNGLVNLQSLSINGSEVTHNVFKTFNKLPKLTYLYAQNSMKITDISALASLPALTTLFLQFDGIDDFRPLNDFESFKNGNLKALAAFGQNTGRTNPRITLKSGKLDYNETNQTLYLPFSMMPKPLTSFDGTVAPFSKSTSASNTYLGFNDVALPSSRLSITDDGITVSGVTKEEFDNLDEIEYNARYDFPTGSYPTPPSMTSYTISSGTYDQYFDISHTLDLTADESFDYNQYDTTSEEQFLKDVHAETDDGTAVKSDFDQVVKLDVPGEYTVTLNAENAAGLKATPVTVKVTVHEKPVITSDSQISYKKETTKSVDEFLKEIHGSVTGNAVLTSDFDKVVDLNTPGEYTVTLNAINDRGQKADPVTVVVTVTTSDSGHVNPVPPTPEVKPTPQEETDQTIIPEPQSETTEDSVKEDQAKDGQAKSEEKADKTSLTTKENKVEKSEKTNQPKTKALPQTGDTNKTALPIAGVMLSLAALLIFRKSKS
>NZ_CP013722.1|WP_003721301.1|990089_990521_-|universal-stress-protein
MEKYHRILVAVDGSEPAKLAFEKGLELALKLDGVLGIASIVDLRAFSPNVSYDGSLEEKAELELKTSVNEYAEKARTAGVKQVETFVAKGNPKILLSTDIPAEFQADLIICGATGMNRVEKLVLGSVSSYIMAHAICDTLIAR
>NZ_CP013722.1|WP_058876335.1|988612_990043_+|CapA-family-protein
MKKLTYVIITGLVLVFIAGAFWITNSTNQSDQKATQTEPIKKISPANVKTISSEAKKTLNSLASSGADKASISDLKQLIKELKSYPTEKNDSGVYLQNLTACLEAVKSYTTGKADEKTLGKVYPAFLASEQKLSAIEKTNQYDWFYAAAATNQQGLKEKGVVTLTMVGDNSFGTYPETPEHLKFDNVFQKNNGNNTYVYKNCLPWFKSDDYTVINAESAFTNATKAENKKWRIKSDPAHVAFLPASGVEAANLANNHTMDYFQVGYDDTLKAFKENNIPVFNTDAPLETTIKGMKTVLLGYDCRMSQQSPAYLERIVKDVKKYKKEDTLVIVNMHWGVEYRETPTDYQTQFGHAILDAGADIIMGSHPHRLESVEKYKDKYIVYSMGDFAFGADPTLLSRMTSMFQLRFTKEDNKIVLKDISIVPTYENSDGSTTENNYQPLPVFGDDAKKIVDELNRISKPIEGGVTEYTYFDPF
>NZ_CP013722.1|WP_003721303.1|987676_988492_+|histidine-phosphatase-family-protein
MKKNIFKLLMALCAVLLIAGCGNSTSADKKETKETKEDGTVTFYVVRHGKTMLNTTDRVQGWSDAVLTPAGEEVVKSAGKGLKDVDFSAAYSSDSGRAIQTANLILKESDKSADKEVQTDPRFREFNFGSYEGDLNENMWTDIAKSQGKTLEEWQKAGLSPKDFANSVAALDKTRVKEGENWPAEDYATIQARLKEGLTDVAKKESKNGDSNVLLVSHGLSIGALLDTIEPGYKLPAEGIKNASVTKITYKDGKFTIGDVNDLSYVEKGSK
>NZ_CP013722.1|WP_058876334.1|986601_987324_-|CRISPR-associated-endoribonuclease-Cas6
MRLKINCDFDSKIIPKDFQSKVVSLFKAGIMKSSPERYENLFGGNKHKQYTFSVYLPKPQNKGAEIQLNEANCIINFSTGDAETGIIFYNALISLRGSKVLFGAGNHITVKNIQIVPEKKIIGKQTILRTLSPVVSRDHNRETFKNWFYSFEDEEFEPTLKRNMLPYLMDAFGEQARYDLEKLKITPISMKKVVVYCHEIHIESSVGIFELEAEAYLQKYLVENGLGTMTGSGFGMIEQL
>NZ_CP013722.1|WP_003721295.1|997428_998364_-|ribose-phosphate-pyrophosphokinase
MAGKMKLFSVTSERPLATKIADYLDIPLCEVELQKFSDGEVKINIEESIRGTNAYVVQSMNSNVNERLMELLIMVDALKRASVHSINIIMPYYGYARQDRKARSREPITAKLMANLIQRAGANRLITVDLHAAQIQGFFNIPIDHLSAIPLIGDYLIENYGEKDVVVVAPDHSGVVRARRIADRLNAPIAILNRKPRPHEDEIMSVIGDVKGKVAIVVDDIIDTGVRATTSADILLEKGAVEVIACATHSVMAGNATERLQNSSIKEVITSDSIDLPEDKQFDKLTTISIGRILGRAIEGVQENRSLHPLF
>NZ_CP013722.1|WP_003721294.1|998503_999775_-|PTS-galactitol-transporter-subunit-IIC
MDIILDFFKYIIGLGVTVMMPIIITILGVIFRKKISVAFKAGLTVGVGFVGLGVITSLMLTTITPVTKALVENYNFKLTATDIGWGVGSSLAWGTEVVPFVFVAIIATNILMIAFKWTKTMDVDIWNYWQPLFIASALYLTTGSMIIAVLSSIINMAIIFKIADWTQKDVEDVLGLEGISLPQIQTTGWALVGYPMNWLLGKIPGVRKINWSTEKVQSRLGIFGEPMLMGLIIGGGLAAIAQMPLSQVLQTGVTIAASLVLIPRMVSLLMDGLTVISEAAHEFMEKRFPGRELFIGLDSAVGIGHPFVLSLGLLMIPITLILAFILPGNKVLPLADLTALPFYMIFAIVPSKGNLFRGIFTGIVIVIITLYLSGAAAPLMTELAGQIGYNIPKDAVEVTSLAVGTQWYTWIVYYGLHWFGGIL
>NZ_CP013722.1|WP_003727301.1|999789_1000083_-|PTS-sugar-transporter-subunit-IIB
MKKKKIYVCCGTGIATSTVISKKVRAVLDEKRIPYEISQCTVQEVASKVSTSKPDIIVSSTTVTGDVGDVPVVIGRSFLTGLKKQETIDEILAILQD
>NZ_CP013722.1|WP_003730559.1|1000098_1001145_-|galactitol-1-phosphate-5-dehydrogenase
MKALKLYGKRDLRYEEADMPTIEQPDDVILKVKTVGICGSDISRYSKLGPYVPGMVWGHEFSGEVIEVGSEVTDIEIGDRAAGCPALYCGECEYCKKGEFARCRKLTVIGARHPGAYAEYIKLPAENVVKIPDELDYEAAALVEPSAVVVHGFYHTKLQAGDDVVVVGSGNIGLLAIQWAKVFGARRVIAIDVDDKKLALAKEVGADVVINSLKEDPLEVVAAHTDGLNADLVVEAAGSPITSAQVFAYAKKGGGVVFLGIPYADVTIERFYFEKIVRSELTVWGSWNAISAPFPGKEWQTTIHFLANKQINIEPMITHRLSLAEGPEVFERIYERNEFFGKVLFFPE
>NZ_CP013722.1|WP_012951245.1|1001141_1001792_-|ribulose-phosphate-3-epimerase
MAKIVPSVFGADIGRINEQLQVLEKNDIDLLHVDMMDGSFVPNIAFGPDQIKMMKKGTKLQFDVHMMVYEPDRYIPRLVEAGAHMITVHQEATTHLHRTIQLIKSYGVRAGVVLNPGTPPSTLEYVLDDIDCILLMTVNPGLGGQKFFQSSLEKIRKTKAYIGNRPIQIEVDGGVNAELAKECTLAGADLIVVGSYLFEGDIEANLEKLAKGVLTE
>NZ_CP013722.1|WP_009924745.1|1001802_1002201_-|hypothetical-protein
MGSFFASFVDWLIGSPGRFVVNLIEDNMLIFMFVVMIYATTILYAKWTLAYYLPKKMSQLAEMKTWELDELYAAWQTEKKALPWYILVPSRNEFWVKSARNAPESTKLLHFSQQKLKLSDKEKLQKIIEIQS
>NZ_CP013722.1|WP_003733191.1|1002217_1002685_-|PTS-sugar-transporter-subunit-IIA
MDVLEYFKEEMVRFSNEQNKEKLLAEMAEQLCEVGAVKPSYKDAVIKREKVFPTGLLTAHAGVAIPHTDSEHVIRPVVAVRILKKPVSFIEMASDNEAIDVRIVFMMALRSADEQLDMLQTLIQLIQDEEVMTTLLKAQETGDVLSAIEHFSKNN
>NZ_CP013722.1|WP_003733192.1|1002712_1003315_-|SIS-domain-containing-protein
MDKQAILNNIHQTWQEEANAISRLPEVTSEEALVKTVEKIAECTGKIVVAGCGTSGVAAKKLVHSFNCIERPAVFLTPSDAVHGTLGVLQKEDILILISKGGNTGELLNLIPACKTKGSTLIGVTENPDSVIAKEADIFFPVSVSKEPDPFNMLATASTMAVIASFDAVIVCLMTYMNYTKEQFSVIHPGGAVGNKLLNK
>NZ_CP013722.1|WP_058876336.1|1003318_1005379_-|BglG-family-transcription-antiterminator
MYLDNRSKTLFQEVIKNPNITNKQLEVKYKLSRYQISYSFQKVNEWLKWKNYPEVKRSKNGRFILEPELTALFSEKETRDPSVEYLPSENERANLILLMLLTSKEELSLAHFTTKIQVSKNTILRDLKVAQKLLPKETTVTYSRASGYQLAGSEWELRKVLTQVVSSVKEMFRGEHYFLSYSGIEKVQLMEIRRTLEEAEAMMQIKFTYEQIELLPYLLSVMFLRIRDRRLIDTAFHIDEKSLSDTREYHITDILLEKTGPVPEQERLFITLQLLTTNIFSGEILTEKLTEDLEKVVLTCLDLFEKKALVSLKNKHILIEKLLLHLKPAYYRIKYQMNLEDTLYEKFNQEFEALNFIVKEAFDPLAKFIGREIPAGEIFFISLFIGSDMIPQNDIYHKQKRAIVLCPSGVTFSKIMENILVKLFPEIHFYPTISVREYAFFKAEVDIVFSSIPLKDGENVFVVQPFMNDIEKTQLRQHVLQNLFGMGNQLTSIDKIMEVVERNADIKDPNAIRDGIIDILSANTATDENKRVKKVYLHDLITEDNIMICEDVKNYQEAIRLASQPLLLQQAITANYVKTMIDNHKFHDPYIIIGEDIAIPHAMPNAGVNRLAMSLLVVKNGVYFSETEQVHFVIVIAPVDKEQHIEALYQIVHLAENHQILDDLLENVTEEKIMQTINQLVIREDE
>NZ_CP013722.1|WP_012951243.1|1005487_1006138_-|transaldolase
MHLDSANLDDVKKIQASSIFKGITTNPTILVKEKCNRQTAINRILELTDKQVFVQTVGFTYEEILADARMLLTMFGKDKIAIKIPAHEAGTNVIDTLKKEDKTIQILGTAIYSADQAITAALVGADFVAPYVNRMSAANIDPFKEIRQMRHFFDKKALKTQIMAASFKHSGQVMQAYESGADTVTIPYEIYLQMTNKVLAVEAIRVFNEDAVLYEK

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Crispr_ID: NZ_CP013722_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP013722_3

1317259-1317410

Unclear

Consensus_repeat	Method
GAGCTCGGTTCCGATGTAGCAGGAGCATTAAAACCAAGAAGCATTGG	CRISPRCasFinder

1 spacers

cas3

The CRISPR arrays of NZ_CP013722_3

>merge|NZ_CP013722|3|1317259-1317410|CRISPRCasFinder
GAGCTCGGTTCCGATGTAGCAGGAGCATTAAAACCAAGAAGCATTGGCGTCTCTGGCAAAGCAAGTCTTAACTCTTCATCCGTAGGTGGTGGTGGAAATTCGAATGAGCTCGGTTCTGATGTAGCAGGAGCATTAAAACCAAGAAGCATTGG

>NZ_CP013722|3|3|1317259-1317410|CRISPRCasFinder
GAGCTCGGTTCCGATGTAGCAGGAGCATTAAAACCAAGAAGCATTGG	CGTCTCTGGCAAAGCAAGTCTTAACTCTTCATCCGTAGGTGGTGGTGGAAATTCGAAT
GAGCTCGGTTCTGATGTAGCAGGAGCATTAAAACCAAGAAGCATTGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP013722.1\|WP_003725735.1\|1314054_1314387_+\|putative-heavy-metal-binding-protein	unknown	unknown	gnl\|CDD\|179228
NZ_CP013722.1\|WP_003733150.1\|1310704_1311289_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379228
NZ_CP013722.1\|WP_058876383.1\|1306383_1309923_-\|transcription-repair-coupling-factor	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|224118
NZ_CP013722.1\|WP_003722723.1\|1329518_1330211_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213222
NZ_CP013722.1\|WP_058876384.1\|1314437_1314899_-\|YehR-family-lipoprotein	unknown	unknown	gnl\|CDD\|227145
NZ_CP013722.1\|WP_003722731.1\|1320314_1321904_-\|cholesterol-dependent-cytolysin-listeriolysin-O	unknown	unknown	gnl\|CDD\|366559
NZ_CP013722.1\|WP_003722727.1\|1325132_1326506_-\|bifunctional-UDP-N-acetylglucosamine-diphosphorylase/glucosamine-1-phosphate-N-acetyltransferase-GlmU	unknown	unknown	gnl\|CDD\|184643
NZ_CP013722.1\|WP_003722729.1\|1323369_1324083_+\|listeriolysin-transcriptional-regulator-PrfA	unknown	unknown	gnl\|CDD\|223736
NZ_CP013722.1\|WP_003722742.1\|1310037_1310598_-\|aminoacyl-tRNA-hydrolase	unknown	unknown	gnl\|CDD\|235457
NZ_CP013722.1\|WP_003722725.1\|1327320_1327629_-\|septation-protein-SpoVG	unknown	unknown	gnl\|CDD\|237321
NZ_CP013722.1\|WP_003722724.1\|1328313_1329522_-\|FtsX-like-permease-family-protein	unknown	unknown	gnl\|CDD\|182528
NZ_CP013722.1\|WP_003722728.1\|1324125_1325082_-\|ribose-phosphate-diphosphokinase	unknown	unknown	gnl\|CDD\|234929
NZ_CP013722.1\|WP_014601598.1\|1322145_1323099_+\|phosphatidylinositol-specific-phospholipase-C	unknown	unknown	gnl\|CDD\|176497
NZ_CP013722.1\|WP_003733146.1\|1315428_1316298_-\|phosphatidylcholine-phospholipase-C	unknown	unknown	gnl\|CDD\|214813
NZ_CP013722.1\|WP_003722740.1\|1311378_1312002_-\|50S-ribosomal-protein-L25/general-stress-protein-Ctc	unknown	unknown	gnl\|CDD\|235534
NZ_CP013722.1\|WP_003722726.1\|1326892_1327201_-\|septation-protein-SpoVG	unknown	unknown	gnl\|CDD\|237321
NZ_CP013722.1\|WP_003722732.1\|1318451_1319984_-\|zinc-metalloproteinase-Mpl	unknown	unknown	gnl\|CDD\|225768
NZ_CP013722.1\|WP_009930499.1\|1313313_1313988_+\|DNA-alkylation-repair-protein	unknown	unknown	gnl\|CDD\|378033
NZ_CP013722.1\|WP_003722739.1\|1312295_1313237_+\|L-lactate-dehydrogenase	unknown	unknown	gnl\|CDD\|178836
NZ_CP013722.1\|WP_003722735.1\|1315033_1315357_-\|DUF5502-family-protein	unknown	unknown	gnl\|CDD\|340321

Protein	Function_ID	Function_description	E-value
NZ_CP013722.1\|WP_003725735.1\|1314054_1314387_+\|putative-heavy-metal-binding-protein	gnl\|CDD\|179228	PRK01119, PRK01119, putative heavy metal-binding protein.	8.98192e-61
NZ_CP013722.1\|WP_003733150.1\|1310704_1311289_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379228	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	7.15404e-10
NZ_CP013722.1\|WP_058876383.1\|1306383_1309923_-\|transcription-repair-coupling-factor	gnl\|CDD\|224118	COG1197, Mfd, Transcription-repair coupling factor (superfamily II helicase) [DNA replication, recombination, and repair / Transcription].	0
NZ_CP013722.1\|WP_003722723.1\|1329518_1330211_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213222	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein. This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of lipoproteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyzes the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.	7.27113e-121
NZ_CP013722.1\|WP_058876384.1\|1314437_1314899_-\|YehR-family-lipoprotein	gnl\|CDD\|227145	COG4808, COG4808, Uncharacterized protein conserved in bacteria [Function unknown].	1.48507e-59
NZ_CP013722.1\|WP_003722731.1\|1320314_1321904_-\|cholesterol-dependent-cytolysin-listeriolysin-O	gnl\|CDD\|366559	pfam01289, Thiol_cytolysin, Thiol-activated cytolysin.	1.50399e-178
NZ_CP013722.1\|WP_003722727.1\|1325132_1326506_-\|bifunctional-UDP-N-acetylglucosamine-diphosphorylase/glucosamine-1-phosphate-N-acetyltransferase-GlmU	gnl\|CDD\|184643	PRK14354, glmU, bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU.	0
NZ_CP013722.1\|WP_003722729.1\|1323369_1324083_+\|listeriolysin-transcriptional-regulator-PrfA	gnl\|CDD\|223736	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms].	9.59942e-12
NZ_CP013722.1\|WP_003722742.1\|1310037_1310598_-\|aminoacyl-tRNA-hydrolase	gnl\|CDD\|235457	PRK05426, PRK05426, peptidyl-tRNA hydrolase; Provisional.	4.98809e-109
NZ_CP013722.1\|WP_003722725.1\|1327320_1327629_-\|septation-protein-SpoVG	gnl\|CDD\|237321	PRK13259, PRK13259, septation regulator SpoVG.	2.92652e-53
NZ_CP013722.1\|WP_003722724.1\|1328313_1329522_-\|FtsX-like-permease-family-protein	gnl\|CDD\|182528	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB.	4.34799e-62
NZ_CP013722.1\|WP_003722728.1\|1324125_1325082_-\|ribose-phosphate-diphosphokinase	gnl\|CDD\|234929	PRK01259, PRK01259, ribose-phosphate diphosphokinase.	0
NZ_CP013722.1\|WP_014601598.1\|1322145_1323099_+\|phosphatidylinositol-specific-phospholipase-C	gnl\|CDD\|176497	cd00137, PI-PLCc, Catalytic domain of prokaryotic and eukaryotic phosphoinositide-specific phospholipase C. This subfamily corresponds to the catalytic domain present in prokaryotic and eukaryotic phosphoinositide-specific phospholipase C (PI-PLC), which is a ubiquitous enzyme catalyzing the cleavage of the sn3-phosphodiester bond in the membrane phosphoinositides (phosphatidylinositol, PI; Phosphatidylinositol-4-phosphate, PIP; phosphatidylinositol 4,5-bisphosphate, PIP2) to yield inositol phosphates (inositol monosphosphate, InsP; inositol diphosphate, InsP2; inositol trisphosphate, InsP3) and diacylglycerol (DAG). The higher eukaryotic PI-PLCs (EC 3.1.4.11) have a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. They play a critical role in most signal transduction pathways, controlling numerous cellular events, such as cell growth, proliferation, excitation and secretion. These PI-PLCs strictly require Ca2+ for their catalytic activity. They display a clear preference towards the hydrolysis of the more highly phosphorylated PI-analogues, PIP2 and PIP, to generate two important second messengers, InsP3 and DAG. InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. In contrast, bacterial PI-PLCs contain a single catalytic domain. Although their precise physiological function remains unclear, bacterial PI-PLCs may function as virulence factors in some pathogenic bacteria. They participate in Ca2+-independent PI metabolism. They are characterized as phosphatidylinositol-specific phospholipase C (EC 4.6.1.13) that selectively hydrolyze PI, not PIP or PIP2. The TIM-barrel type catalytic domain in bacterial PI-PLCs is very similar to the one in eukaryotic PI-PLCs, in which the catalytic domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. The catalytic mechanism of both prokaryotic and eukaryotic PI-PLCs is based on general base and acid catalysis utilizing two well conserved histidines, and consists of two steps, a phosphotransfer and a phosphodiesterase reaction. This superfamily also includes a distinctly different type of eukaryotic PLC, glycosylphosphatidylinositol-specific phospholipase C (GPI-PLC), an integral membrane protein characterized in the protozoan parasite Trypanosoma brucei. T. brucei GPI-PLC hydrolyzes the GPI-anchor on the variant specific glycoprotein (VSG), releasing dimyristyl glycerol (DMG), which may facilitate the evasion of the protozoan to the host#s immune system. It does not require Ca2+ for its activity and is more closely related to bacterial PI-PLCs, but not mammalian PI-PLCs.	1.02822e-114
NZ_CP013722.1\|WP_003733146.1\|1315428_1316298_-\|phosphatidylcholine-phospholipase-C	gnl\|CDD\|214813	smart00770, Zn_dep_PLPC, Zinc dependent phospholipase C (alpha toxin). This domain conveys a zinc dependent phospholipase C activity (EC 3.1.4.3). It is found in a monomeric phospholipase C of Bacillus cereus as well as in the alpha toxin of Clostridium perfringens and Clostridium bifermentans, which is involved in haemolysis and cell rupture. It is also found in a lecithinase of Listeria monocytogenes, which is involved in breaking the 2-membrane vacuoles that surround the bacterium. Structure information: PDB 1ca1.	1.12447e-86
NZ_CP013722.1\|WP_003722740.1\|1311378_1312002_-\|50S-ribosomal-protein-L25/general-stress-protein-Ctc	gnl\|CDD\|235534	PRK05618, PRK05618, 50S ribosomal protein L25/general stress protein Ctc; Reviewed.	2.38585e-63
NZ_CP013722.1\|WP_003722726.1\|1326892_1327201_-\|septation-protein-SpoVG	gnl\|CDD\|237321	PRK13259, PRK13259, septation regulator SpoVG.	5.03804e-54
NZ_CP013722.1\|WP_003722732.1\|1318451_1319984_-\|zinc-metalloproteinase-Mpl	gnl\|CDD\|225768	COG3227, LasB, Zinc metalloprotease (elastase) [Amino acid transport and metabolism].	3.90486e-139
NZ_CP013722.1\|WP_009930499.1\|1313313_1313988_+\|DNA-alkylation-repair-protein	gnl\|CDD\|378033	pfam08713, DNA_alkylation, DNA alkylation repair enzyme. Proteins in this family are predicted to be DNA alkylation repair enzymes. The structure of a hypothetical protein in this family shows it to adopt a supercoiled alpha helical structure.	1.81561e-21
NZ_CP013722.1\|WP_003722739.1\|1312295_1313237_+\|L-lactate-dehydrogenase	gnl\|CDD\|178836	PRK00066, ldh, L-lactate dehydrogenase; Reviewed.	0
NZ_CP013722.1\|WP_003722735.1\|1315033_1315357_-\|DUF5502-family-protein	gnl\|CDD\|340321	pfam17606, DUF5502, Family of unknown function (DUF5502). This is a family of unknown function found in Listeria.	5.76244e-49

>NZ_CP013722.1|WP_003733146.1|1315428_1316298_-|phosphatidylcholine-phospholipase-C
MKFKKVVLGMCLTASVLVFPITIKANACCDEYLQTPAAPHDIDSKLPHKLSWSADNPTNTDVNTHYWLFKQAEKILAKDVNHMRANLMNELKKFDKQIAQGIYDADHKNPYYDTSTFLSHFYNPDRDNTYLPGFANAKITGAKYFNQSVTDYREGKFDTAFYKLGLAIHYYTDISQPMHANNFTAISYPPGYHCAYENYVDTIKHNYQATEDMVAKRFCSDDVKDWLYENAKRAKADYPKIVNAKTKKSYLVGNSEWKKDTVEPTGARLRDSQQTLAGFLEFWSKKTNE
>NZ_CP013722.1|WP_003722735.1|1315033_1315357_-|DUF5502-family-protein
MYIKGRLIFFFVMFVIALCSVLILLIIKISVWKDEPFHLSDAKEIECLGSCEIKNTNQKIHFFSIKENLFEEKGDIAGILNEDEQKVADKSIFIVILDDEKGIANEE
>NZ_CP013722.1|WP_058876384.1|1314437_1314899_-|YehR-family-lipoprotein
MKMLKKGTAVLFVMIMAVMLVACGDKEETKTYTLSQNGVDSKLTYTYKGDKVTKQTAENTMSYASLGVDSKEDAEKMLKATSDKFQGIDGLKEKIEYKDDKAIETLEVDYTKISSEDMNKIPGMSSNGDTSKGISMEESAKMLESQGYKEVSK
>NZ_CP013722.1|WP_003725735.1|1314054_1314387_+|putative-heavy-metal-binding-protein
MIVTTSPNIEGKQIIEYKKIVFGEVITGVNFMKDIGAGLRNFFGGRSQGYEDELINAREEAIREMEQRAKDIGANAVIGVDIDYEVLGADNGMLMVTASGTAVVIEAQDY
>NZ_CP013722.1|WP_009930499.1|1313313_1313988_+|DNA-alkylation-repair-protein
MITFDQLDTELQALENPNTIKIFRNHGCPDSLDLYGLKIGDLKKIIRREKLTKNHELAVKLIESNNSDLIYLGLLAINPNKITTEQIEKWNIAFRETWSQLTFGLASIVSKRDDALLFAKTWIESDYDLTKSMGWQIYSEHINNLPEAETLLQRAKETLQTETNRTRYSMNGFIITCGIYKDDLHEKAMEAAKSVGKVHVNLGNTACKVPDAISYIEKARNRTK
>NZ_CP013722.1|WP_003722739.1|1312295_1313237_+|L-lactate-dehydrogenase
MKDHQKIILVGDGAVGSSYAFACVNLSIGQEFGIIDIDKDRTIGDAMDLSHAVPFSTPKKIYSANYSDCHDADLVVVTAGTAQKPGETRLDLVNRNIKIMKGIVDEVMASGFDGIFLIASNPVDILTYATWKFSGLPKERVIGSGTSLDTARFRMSIADYLKVDARNVHGYILGEHGDTEFPAWSHTTVGGLPITEWISEDEQGAMDTIFVSVRDAAYEIINKKGATFYGVAAALARITKAILNNENAILPLSVYLDGHYGMNDIYIGAPAVVNRQGVRHIVEMNLNDKEKEQMKNSADTLKKVLDDAMKQID
>NZ_CP013722.1|WP_003722740.1|1311378_1312002_-|50S-ribosomal-protein-L25/general-stress-protein-Ctc
MATTLEVQKRETTQHSEVTRLRSEGKVPGIIYGYKSENVPVSVDSLELIKAVRDNGRNAVFSVTVDGKKLNVLLHEYQVDPLKDVLVHVDLLAVDMNEEVETDVRVVLVGDAPGVKAGGVLQQIIHDVKVSATPEKLPETIELDISSLEIGDVLTTNDLPENKDYVVQAEEEETVVTVSAPRAEEEPTTTEAPEPEAVHGKDEEPVE
>NZ_CP013722.1|WP_003733150.1|1310704_1311289_-|GNAT-family-N-acetyltransferase
MLDKSVPHISVIMVNHDATNYPEFHLPAGYSFCFYKDGLEEDWCRLQLETGQVLSMDSIRARFETEFGNEKEKLTKRCIFVKAPNGEIIGTAMLWDGNTFGKMESRIHWVAVLDSHGGKGIAKALLSKILGLNKSKFVYLTTQTGSYQAIYLYRKFGFEKYVGKTPENWKTVNFQEEKETAWQIIENKIAEHQA
>NZ_CP013722.1|WP_003722742.1|1310037_1310598_-|aminoacyl-tRNA-hydrolase
MKLIAGLGNPGKKYERTRHNVGFMVVDELSFRHQTPWKKSKFNGMTSEIIVGGEKMILVKPLTFMNASGECIRPLMDYYNIPIEDVVIVYDDLDLPVGKIRLRQKGSAGGHNGMKSIIQHVKTQEFNRIRVGVSRPLKGEVINYVLGDFPKAEQPDIIAAIQKSADAIEDFAQTPFIEVMNKYNQK
>NZ_CP013722.1|WP_058876383.1|1306383_1309923_-|transcription-repair-coupling-factor
MKGLQQLIYEQKDIRAVLNALDEKEKAQLVTGLTGSSRALFASVVEGASKRPVVFVTHNLYHAQKLYDDLLSLMDVDRLFLYPADELISSELSISSPELRGQRVEALDFLLSGKPGIVIVPVAGLRKMLPPVSLWKHFNISIVEGEEIDPDVLRQKLVTMGYTMSGMVNTPGEFSVRGGIIDIYPITEEFPIRIELFDTEVDSLRFFDVETQRSTTRVEEFRLLPATEIILDQSYYPDIVKRLEKKMMLTLNELKEQEDKQALIENLEEDLEMLRSGVKPDRFFKYIGLAYPDPASLFDYLPKNTAILLDEFGRILETEESLEREEAEWQTETLSRMETVRDVQVSHSFKKLLEGNHSPKIYLSLFQKQMASMRVSKTTNIVYKQMQQFHGQMNVLKTELESWHKNNYAVVILAPNLERAEKMQQTLTDYDMESTILKKESDVPKYGMVQFVIGTFQNGFELPLAKVAIISETELFNKKIKKVKKRQKLSNAERIQSYSELKVGDYVVHVNHGIARYVGMETLDINGVHKDYLLLVYQGEDKLFIPVDQLDLVQKYVGAEGKSPRLNKLGGAEWKRVKKKVQASVQDIADDLIKLYAEREAEKGYAFSADDEMQREFEEAFPYQETEDQLRSISEIKKDMERPRPMDRLLVGDVGYGKTEVALRAAFKAIMDGKQVAFLVPTTILAQQHFETMKERFQGFPIEIGLLSRFRTKKQQTETLKGMKNGTVDVVVGTHRLLSKDVEYQDLGLLIVDEEQRFGVTHKEKIKQMRSKIDVLTLTATPIPRTLHMSMLGVRDLSVIETPPANRFPVQTYVAEQNNVLVREAIERELARDGQVYYLYNRVESITQKADEISAMVPDARVATAHGQMGESELESVILSFLEGEFDVLVTTTIIETGVDIPNVNTLFVQDADRMGLSQLYQLRGRVGRWNRIAYAYFMYQKDKILREEAEKRLSAIKEFTELGSGFKIAMRDLSIRGAGNILGAQQHGFIDSVGFDLYSQMLKEAIEAKKPKEEQKQIVPVEIDIQADAYIPEYYITDGRQKIEMYKRFRNIETLSELEDLQSDMIDRFGEYPEEVEYLFTMTELKVHALEVGIESVKQEQNKITMLFSESGTAGIRGDIVMQIIGEFGRMVGVGMEGTQLKITINVQNKPLKEWLYQVKSLAEKLRGAMKEKASTEN
>NZ_CP013722.1|WP_003722732.1|1318451_1319984_-|zinc-metalloproteinase-Mpl
MKSKLICIIMVIAFQAHFTMTVKADSVGEEKLQNNTQAKKTPADLKALPDSCEAKDFYKNFKILDMTKDKLGVTHYTLALSSGGYLTDNDEIKVHVTPDNKITFINGDLQQGQLRITNQIKITEKNAIEKAFEAIGQSEAHVKSYVGNPVKEKEIILNSRTKRLVYNIKLIFAEPEVASWIVQVDAETGAILKKQNMLSEVERADTHKDFQALGKGANRLLQRPLHVMKINDLFYLVDRTHKGLIRTFDLKHNTDTSFGKVVSNKTNMFTDPEFSSAVDAHFYASEVYEYYKNVHQLESLDGKGGEIDSFVHYGLNCNNAFWDGQEILYGDGDKKNFKPFSCAKTIVGHELTHAVIQYSAGLEYEGQSGALNESFADVFGYFIAPNHWLIGEDVCVRGSRDGRIRSIKDPDKYNQAAHMKDYESLPITEEGDWGGVHYNSGIPNKAAYNTITKLGKEKTEQLYFRALKYYLTKKSQFTDAKKALQQAAKDLYGEDASKKVAEAWEAVGVN
>NZ_CP013722.1|WP_003722731.1|1320314_1321904_-|cholesterol-dependent-cytolysin-listeriolysin-O
MKKIMLVFITLILVSLPIAQQTEAKDASAFNKENSISSMAPPASPPASPKTPIEKKHADEIDKYIQGLDYNKNNVLVYHGDAVTNVPPRKGYKDGNEYIVVEKKKKSINQNNADIQVVNAISSLTYPGALVKANSELVENQPDVLPVKRDSLTLSIDLPGMTNQDNKIVVKNATKSNVNNAVNTLVERWNEKYAQAYPNVSAKIDYDDEMAYSESQLIAKFGTAFKAVNNSLNVNFGAISEGKMQEEVISFKQIYYNVNVNEPTRPSRFFGKAVTKEQLQALGVNAENPPAYISSVAYGRQVYLKLSTNSHSTKVKAAFDAAVSGKSVSGDVELTNIIKNSSFKAVIYGGSAKDEVQIIDGNLGDLRDILKKGATFNRETPGVPIAYTTNFLKDNELAVIKNNSEYIETTSKAYTDGKINIDHSGGYVAQFNISWDEVNYDPEGNEIVQHKNWSENNKSKLAHFTSSIYLPGNARNINVYAKECTGLAWEWWRTVIDDRNLPLVKNRNISIWGTTLYPKYSNKVDNPIE
>NZ_CP013722.1|WP_014601598.1|1322145_1323099_+|phosphatidylinositol-specific-phospholipase-C
MYKNYLQRTLVLLLCFVLYFFTFPLGGKAYSLNNWNKPIKNSVTTKQWMSALPDTTNLAALSIPGTHDTMSYNGDITWTLTKPLAQTQTMSLYQQLEAGIRYIDIRAKDNLNIYHGPIYLNASLSGVLETITQFLKKNPKETIIMRLKDEQNSNDSFDYRIQPLINIYKDYFYTTPRTDTSNKIPTLKDVRGKILLLSENHTKKPLVINSRKFGMQFGAPNQVIQDDYNGPSVKTKFKEIVQTAYQASKADNKLFLNHISATSLTFTPRQYAAALNNKVEQFVLNLTSEKVRGLGILIMDFPEKQTIKNIIKNNKFN
>NZ_CP013722.1|WP_003722729.1|1323369_1324083_+|listeriolysin-transcriptional-regulator-PrfA
MNAQAEEFKKYLETNGIKPKQFHKKELIFNQWDPQEYCIFLYDGITKLTSISENGTIMNLQYYKGAFVIMSGFIDTETSVGYYNLEVISEQATAYVIKINELKELLSKNLTHFFYVFQTLQKQVSYSLAKFNDFSINGKLGSICGQLLILTYVYGKETPDGIKITLDNLTMQELGYSSGIAHSSAVSRIISKLKQEKVIVYKNSCFYVQNLDYLKRYAPKLDEWFYLACPATWGKLN
>NZ_CP013722.1|WP_003722728.1|1324125_1325082_-|ribose-phosphate-diphosphokinase
MSNEYFDPKLKIFSLNSNRELAEEIAKEVGIELGKSSVTHFSDGEIQINIEESIRGCHVYVIQSTSNPVNQNLMELLIMIDALKRASAATINIVMPYYGYARQDRKARSREPITAKLVANLIETAGATRMITLDMHAPQIQGFFDIPIDHLNAVRLLSDYFSERHLGDDLVVVSPDHGGVTRARKMADRLKAPIAIIDKRRPRPNVAEVMNIVGNVEGKVCIIIDDIIDTAGTITLAAKALREAGATKVYACCSHPVLSGPAMKRIEESPIEKLVVTNSIALPEEKWIDKMEQLSVAALLGEAIVRVHENASVSSLFE
>NZ_CP013722.1|WP_003722727.1|1325132_1326506_-|bifunctional-UDP-N-acetylglucosamine-diphosphorylase/glucosamine-1-phosphate-N-acetyltransferase-GlmU
MSKRYAVVLAAGQGTRMKSKLYKVLHPVCGKPMVEHVVDQISTLNVDKVVTIVGHGAEKVQEHLAGKSEFVKQDEQLGTAHAVLQAKAELAGKDGVTLVVCGDTPLIEASTMEALLKYHHEKRAKATILTTVIEDPTGYGRIIRDDLGIVEKIVEHKDATEKEQRISEINTGTYCFDNKALFEALENVSNDNVQGEYYLPDVIKILKDSDEVVAAYRMESFEESLGVNDRIALAEASKLMQRRINENHMRNGVTLVNPESTYIDIDVKIGQDTVIEPGVMLRGKTVIGDDCVVTSGSEIVNSVIGERVHVRTSSIFESKVGDDVQIGPYAHLRPESDIHDHVKIGNYVETKKAVVGEGTKLPHFIYMGDAEIGKNVNVGCGSIAVNYDGKNKAKTIIGDNVFVGCNSNLIAPVKVGDRAFIAAGSTITKDVPEDALGIARAKQDNKLGYAKHLNHGK
>NZ_CP013722.1|WP_003722726.1|1326892_1327201_-|septation-protein-SpoVG
MQVTDVRLRRVETDGRMRAIASITLDEEFVVHDIRVIDGNNGLFVAMPSKRGVDGEFRDIAHPINSDTRAKIQEVVLAEYERVGEEEATAVTEEESESVSAE
>NZ_CP013722.1|WP_003722725.1|1327320_1327629_-|septation-protein-SpoVG
MEITDVRLRRVETDGRMKAISSITIDGEFVIHDIRVIDGNEGLFVAMPSKRTPDGEFRDIAHPINSGTRAKIQEAVLAAYEVADEPAVNEESSADESIVEEN
>NZ_CP013722.1|WP_003722724.1|1328313_1329522_-|FtsX-like-permease-family-protein
MNVLQSMKMAWKQLKASKLRSFLTMLGIIIGVASVILLVSLGNGVTQEVDDQMGDLGSNLITVVNSSVNPNDKYTYDEVMKYQNIDGVKSVSPELSGQVNATFDYKSSSNKVIGTNDQYKAARSLEMKEGRFLLPIDTEYGQKVAVIGSTVASDLFGFGDPIGETIRLNGMPYKVVGVLKEKGASMMGSSDDQIFIPISSAQRLLKDTNVRTIYVETKSAEDVDFVVNTLESRLAIKFGDEKEQEKNASSAQMGPSYQVINQQEILNAFNTISTTLTTALGAIAAISLVVGGIGIMNIMLVSVSERTREIGIRKALGAKKRAILLQFLIESIVISVCGGVIGIIIGVSGALIFGSVAGISSGITAGTIIFSFVFSLCIGVIFGIAPANKASKLRPIDALRSE
>NZ_CP013722.1|WP_003722723.1|1329518_1330211_-|ABC-transporter-ATP-binding-protein
MPKPLIDMKNLTKTYTLGGETFKALDDVTFTVEQGEFLSIVGPSGSGKSTLMNMIGCLDVPDEGSYHLDDVDVFKLSDNKLSEIRNKKIGFIFQQFNLLPKLSAFENVELPLIYAGLSVSAREKAAIECLEKVGLLEKRRNLPTQLSGGQQQRVAIARALAGKPQILLADEPTGALDSKTGKEVMGILQELNRAGNTIVMITHDPTIASYGTRSIRIQDGKLFHEEATQA

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Crispr_ID: NZ_CP013722_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP013722_4

1793158-1794580

TypeII

II-A,II-B

Consensus_repeat	Method
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	CRISPRCasFinder
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	CRT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	PILER-CR

21 spacers

csn2,cas2,cas1,cas9

The CRISPR arrays of NZ_CP013722_4

>merge|NZ_CP013722|4|1793158-1794580|CRISPRCasFinder,CRT,PILER-CR
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACTTTTGCCGGATGTGTAATACCTTTGAAACCGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACTAGTAACACCAGAGGTTTTTAATGCGTACAGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACTCATTCAAACGGAACATTTACGAATTAGTTGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACTATGTTATTTATAATACCTTCTTTGTTTCCGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACAATATTTAGAGGAATTAGAGCGTACTAATGGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACTACTGACCTTGACTATATCAAGTATAAACTGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACAAAAATATTTATGCAAATCTGGCTGGAACAGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACTTTTAAATATATTAGAGTCACTGTTAGCGGGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACATATAGATGTGAAAGAAGTCCCGTCCACCTGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACTTCAACTACGGGTTTTGTCGGTAGCTTTGTGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACACTTGGCACGGAACTGTTTAGAGTCGGTTTGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACTAACTCTTCTTTCGTCATGTCGTGATGCGTGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACTACAAATTACCGTGAAATTATGACTGCAGCGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACATCCCATTTTTCAACATAATAGGTAGCAACGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACTACGATGTTAAGCGGTGGAGTAGATCAGTAGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACACCATCCATGAAAGATTTAGAAATTTTACAGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACCAAATATAAAATATTCAATAGTCCTATCTTGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACTAAACATCGCTCATCGTGTCTTCTGTCGCTGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACAAAGTACCGCAGTAAATAAGCCTGACTTCTCGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACTAGCAAATTAACACTAGAATACGATTCAGGGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACAGAACAACTACAAAACCAGCTTCTTGAGCGGTTTTAGAGCTACATTATTCTGAATACCAACACATA

>NZ_CP013722|4|4|1793158-1794580|CRISPRCasFinder
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TTTTGCCGGATGTGTAATACCTTTGAAACC
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TAGTAACACCAGAGGTTTTTAATGCGTACA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TCATTCAAACGGAACATTTACGAATTAGTT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TATGTTATTTATAATACCTTCTTTGTTTCC
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	AATATTTAGAGGAATTAGAGCGTACTAATG
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TACTGACCTTGACTATATCAAGTATAAACT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	AAAAATATTTATGCAAATCTGGCTGGAACA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TTTTAAATATATTAGAGTCACTGTTAGCGG
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	ATATAGATGTGAAAGAAGTCCCGTCCACCT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TTCAACTACGGGTTTTGTCGGTAGCTTTGT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	ACTTGGCACGGAACTGTTTAGAGTCGGTTT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TAACTCTTCTTTCGTCATGTCGTGATGCGT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TACAAATTACCGTGAAATTATGACTGCAGC
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	ATCCCATTTTTCAACATAATAGGTAGCAAC
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TACGATGTTAAGCGGTGGAGTAGATCAGTA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	ACCATCCATGAAAGATTTAGAAATTTTACA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	CAAATATAAAATATTCAATAGTCCTATCTT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TAAACATCGCTCATCGTGTCTTCTGTCGCT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	AAAGTACCGCAGTAAATAAGCCTGACTTCTC
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TAGCAAATTAACACTAGAATACGATTCAGG
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	AGAACAACTACAAAACCAGCTTCTTGAGCG
GTTTTAGAGCTACATTATTCTGAATACCAACACATA

>NZ_CP013722|4|3|1793158-1794580|CRT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TTTTGCCGGATGTGTAATACCTTTGAAACC
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TAGTAACACCAGAGGTTTTTAATGCGTACA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TCATTCAAACGGAACATTTACGAATTAGTT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TATGTTATTTATAATACCTTCTTTGTTTCC
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	AATATTTAGAGGAATTAGAGCGTACTAATG
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TACTGACCTTGACTATATCAAGTATAAACT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	AAAAATATTTATGCAAATCTGGCTGGAACA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TTTTAAATATATTAGAGTCACTGTTAGCGG
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	ATATAGATGTGAAAGAAGTCCCGTCCACCT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TTCAACTACGGGTTTTGTCGGTAGCTTTGT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	ACTTGGCACGGAACTGTTTAGAGTCGGTTT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TAACTCTTCTTTCGTCATGTCGTGATGCGT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TACAAATTACCGTGAAATTATGACTGCAGC
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	ATCCCATTTTTCAACATAATAGGTAGCAAC
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TACGATGTTAAGCGGTGGAGTAGATCAGTA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	ACCATCCATGAAAGATTTAGAAATTTTACA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	CAAATATAAAATATTCAATAGTCCTATCTT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TAAACATCGCTCATCGTGTCTTCTGTCGCT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	AAAGTACCGCAGTAAATAAGCCTGACTTCTC
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TAGCAAATTAACACTAGAATACGATTCAGG
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	AGAACAACTACAAAACCAGCTTCTTGAGCG
GTTTTAGAGCTACATTATTCTGAATACCAACACATA

>NZ_CP013722|4|3|1794016-1794514|PILER-CR
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	ATCCCATTTTTCAACATAATAGGTAGCAAC
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TACGATGTTAAGCGGTGGAGTAGATCAGTA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	ACCATCCATGAAAGATTTAGAAATTTTACA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	CAAATATAAAATATTCAATAGTCCTATCTT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TAAACATCGCTCATCGTGTCTTCTGTCGCT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	AAAGTACCGCAGTAAATAAGCCTGACTTCTC
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TAGCAAATTAACACTAGAATACGATTCAGG
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP013722.1\|WP_003733258.1\|1806543_1808025_+\|multidrug-efflux-MFS-transporter	unknown	unknown	gnl\|CDD\|129794
NZ_CP013722.1\|WP_058876445.1\|1787167_1791172_+\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	COG3513_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226044
NZ_CP013722.1\|WP_003733022.1\|1798735_1799764_+\|Mrp/NBP35-family-ATP-binding-protein	unknown	unknown	gnl\|CDD\|378455
NZ_CP013722.1\|WP_014601166.1\|1805555_1806443_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP013722.1\|WP_003723285.1\|1812400_1812877_+\|DUF1641-domain-containing-protein	unknown	unknown	gnl\|CDD\|225283
NZ_CP013722.1\|WP_009931305.1\|1808072_1808915_-\|S-adenosyl-l-methionine-hydroxide-adenosyltransferase-family-protein	unknown	unknown	gnl\|CDD\|224824
NZ_CP013722.1\|WP_023548321.1\|1783398_1784196_+\|energy-coupling-factor-transporter-transmembrane-protein-EcfT	unknown	unknown	gnl\|CDD\|223692
NZ_CP013722.1\|WP_058876444.1\|1784201_1784948_+\|tRNA-pseudouridine(38-40)-synthase-TruA	unknown	unknown	gnl\|CDD\|234577
NZ_CP013722.1\|WP_023548322.1\|1786178_1786658_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013722.1\|WP_058876448.1\|1795121_1795481_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013722.1\|WP_014601171.1\|1791172_1792039_+\|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|187851
NZ_CP013722.1\|WP_058876449.1\|1796047_1796899_+\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381359
NZ_CP013722.1\|WP_003723648.1\|1792035_1792377_+\|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226043
NZ_CP013722.1\|WP_003727703.1\|1785142_1785580_+\|50S-ribosomal-protein-L13	unknown	unknown	gnl\|CDD\|181703
NZ_CP013722.1\|WP_003723652.1\|1785601_1785994_+\|30S-ribosomal-protein-S9	unknown	unknown	gnl\|CDD\|178888
NZ_CP013722.1\|WP_003723643.1\|1796940_1798467_-\|GW-domain-containing-glycosaminoglycan-binding-protein	unknown	unknown	gnl\|CDD\|224619
NZ_CP013722.1\|WP_058876450.1\|1809413_1812401_+\|formate-dehydrogenase-subunit-alpha	unknown	unknown	gnl\|CDD\|225918
NZ_CP013722.1\|WP_003733025.1\|1795603_1796026_+\|MerR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|133384
NZ_CP013722.1\|WP_058876446.1\|1792366_1793029_+\|type-II-A-CRISPR-associated-protein-Csn2	csn2	cd09758_csn2_CAS-II-A	gnl\|CDD\|213408
NZ_CP013722.1\|WP_014602250.1\|1782529_1783396_+\|energy-coupling-factor-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|237454

Protein	Function_ID	Function_description	E-value
NZ_CP013722.1\|WP_003733258.1\|1806543_1808025_+\|multidrug-efflux-MFS-transporter	gnl\|CDD\|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	1.77224e-108
NZ_CP013722.1\|WP_058876445.1\|1787167_1791172_+\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	gnl\|CDD\|226044	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms].	0
NZ_CP013722.1\|WP_003733022.1\|1798735_1799764_+\|Mrp/NBP35-family-ATP-binding-protein	gnl\|CDD\|378455	pfam10609, ParA, NUBPL iron-transfer P-loop NTPase. This family contains ATPases involved in plasmid partitioning. It also contains the cytosolic Fe-S cluster assembling factor NBP35 which is required for biogenesis and export of both ribosomal subunits.	3.84035e-115
NZ_CP013722.1\|WP_014601166.1\|1805555_1806443_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	3.35403e-15
NZ_CP013722.1\|WP_003723285.1\|1812400_1812877_+\|DUF1641-domain-containing-protein	gnl\|CDD\|225283	COG2427, COG2427, Uncharacterized conserved protein [Function unknown].	1.26483e-27
NZ_CP013722.1\|WP_009931305.1\|1808072_1808915_-\|S-adenosyl-l-methionine-hydroxide-adenosyltransferase-family-protein	gnl\|CDD\|224824	COG1912, COG1912, Uncharacterized conserved protein [Function unknown].	4.67495e-126
NZ_CP013722.1\|WP_023548321.1\|1783398_1784196_+\|energy-coupling-factor-transporter-transmembrane-protein-EcfT	gnl\|CDD\|223692	COG0619, CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters [Inorganic ion transport and metabolism].	4.09391e-53
NZ_CP013722.1\|WP_058876444.1\|1784201_1784948_+\|tRNA-pseudouridine(38-40)-synthase-TruA	gnl\|CDD\|234577	PRK00021, truA, tRNA pseudouridine(38-40) synthase TruA.	2.41202e-126
NZ_CP013722.1\|WP_014601171.1\|1791172_1792039_+\|type-II-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|187851	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer intergration. Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	1.276e-135
NZ_CP013722.1\|WP_058876449.1\|1796047_1796899_+\|aldo/keto-reductase	gnl\|CDD\|381359	cd19133, AKR_AKR5F1, the AKR5F family of aldo-keto reductase (AKR). Klebsiella sp. 2,5-diketo-D-gluconic acid reductase (2,5-DKG reductase) is a founding member of aldo-keto reductase family 5 member F1 (AKR5F1). It catalyzes the reduction of 2,5-diketo-D-gluconic acid (25DKG) to 2-keto-L-gulonic acid (2KLG).	7.01743e-171
NZ_CP013722.1\|WP_003723648.1\|1792035_1792377_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	2.60762e-45
NZ_CP013722.1\|WP_003727703.1\|1785142_1785580_+\|50S-ribosomal-protein-L13	gnl\|CDD\|181703	PRK09216, rplM, 50S ribosomal protein L13; Reviewed.	2.08607e-102
NZ_CP013722.1\|WP_003723652.1\|1785601_1785994_+\|30S-ribosomal-protein-S9	gnl\|CDD\|178888	PRK00132, rpsI, 30S ribosomal protein S9; Reviewed.	4.44953e-85
NZ_CP013722.1\|WP_003723643.1\|1796940_1798467_-\|GW-domain-containing-glycosaminoglycan-binding-protein	gnl\|CDD\|224619	COG1705, FlgJ, Muramidase (flagellum-specific) [Cell motility and secretion / Intracellular trafficking and secretion].	5.31629e-69
NZ_CP013722.1\|WP_058876450.1\|1809413_1812401_+\|formate-dehydrogenase-subunit-alpha	gnl\|CDD\|225918	COG3383, COG3383, Uncharacterized anaerobic dehydrogenase [General function prediction only].	0
NZ_CP013722.1\|WP_003733025.1\|1795603_1796026_+\|MerR-family-transcriptional-regulator	gnl\|CDD\|133384	cd01109, HTH_YyaN, Helix-Turn-Helix DNA binding domain of the MerR-like transcription regulators YyaN and YraB. Putative helix-turn-helix (HTH) MerR-like transcription regulators of Bacillus subtilis, YyaN and YraB, and related proteins; N-terminal domain. Based on sequence similarity, these proteins are predicted to function as transcription regulators that mediate responses to stress in eubacteria. They belong to the MerR superfamily of transcription regulators that promote transcription of various stress regulons by reconfiguring the operator sequence located between the -35 and -10 promoter elements. A typical MerR regulator is comprised of distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their N-terminal domains are homologous and contain a DNA-binding winged HTH motif, while the C-terminal domains are often dissimilar and bind specific coactivator molecules such as metal ions, drugs, and organic substrates.	6.8812e-42
NZ_CP013722.1\|WP_058876446.1\|1792366_1793029_+\|type-II-A-CRISPR-associated-protein-Csn2	gnl\|CDD\|213408	cd09758, Csn2, CRISPR/Cas system-associated protein Csn2. Csn2 is a Nmeni subtype-specific Cas protein, which may function in the adaptation process which mediates the incorporation of foreign nucleic acids into the microbial host genome. Csn 2 may interact directly with double-stranded DNA. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA. Csn2 has been predicted to be a functional analog of Cas4 based on anti-correlated phyletic patterns; also known as SPy1049 family.	8.36594e-114
NZ_CP013722.1\|WP_014602250.1\|1782529_1783396_+\|energy-coupling-factor-ABC-transporter-ATP-binding-protein	gnl\|CDD\|237454	PRK13634, cbiO, cobalt transporter ATP-binding subunit; Provisional.	0

>NZ_CP013722.1|WP_058876446.1|1792366_1793029_+|type-II-A-CRISPR-associated-protein-Csn2
MNFNFKLLDDPIQIEDSTIFVIGDVRVFANVTKFFYQYEETEELTIFDAKHQPLKSSELMLITDVLGHDINSAATLKLIYADLEQQLNEKPEVKSMIDKLTATISELIGYELLEHELDLEEDEITVIELFKALGIKIETKSDTVFEKLIEIVQVYKYLSKKKLLVLINVCSYLTEEELLELRRYISLYQVKVLFIEPRKIKGSPQVTLDSDYFLHVENSV
>NZ_CP013722.1|WP_003723648.1|1792035_1792377_+|CRISPR-associated-endonuclease-Cas2
MSYRYMRMLLMFDMPTDTAKERKAYRQFRRFILSEGFIMHQYSVYSKILLNGTASKAMLARLKQQNPKKGLITLLTVTEKQFARMVYLSGEQNKSIGNSDARLVFLGDDADEF
>NZ_CP013722.1|WP_014601171.1|1791172_1792039_+|type-II-CRISPR-associated-endonuclease-Cas1
MGWRTVVVNSHSKLSYKNQHLVFKSAYQQEMIHLSEIDVLILETTDITLTTMLINCLVAENILILFCDDKRLPIGKVLPFYGRHDSSLQLTKQLEWDAELKAAVWTEIISQKILNQSTYLSMLNYDEKASSLINLHETLAVFDPTNREGHAARIYFNQLFGNDFTREQENDINSGLNYGYTLLLSIFARELVKSGCMTQFGLKHANQFNDFNLASDLMEPFRPLVDQIVYEKRNEDFQVIKRSLFELFTKQFDYNDQHMFLTNIASDYTKKIVKVLNEEREGVPEFRI
>NZ_CP013722.1|WP_058876445.1|1787167_1791172_+|type-II-CRISPR-RNA-guided-endonuclease-Cas9
MKNPYTIGLDIGTNSVGWAVLTNQYDLVKRKMKVAGNSDKKQIKKNFWGVRLFDDGQTAVDRRMNRTARRRIERRRNRISYLQEIFAVEMANIDANFFCRLNDSFYVDSEKRNSRHPFFATIEEEVAYHKNYRTIYHLREELVNSSEKADLRLVYLALAHIIKYRGNFLIEGALDTKNTSVDGVYEQFIQTYNQVFMSNIEEGTLAKVEENIEVANILAGKFTRREKFERILQLYPGEKSIGMFAQFISLIVGSKGNFQKVFDLIEKTDIECAKDSYEEDLETLLAIIGGEYAELFVAAKNTYNAVVLSSIITVTDTETNAKLSASMIERFDAHEKDLGELKAFIKLHLPKQYQEIFNNAAIDGYAGYIDGKTKQVDFYKYLKTTLENVEGADYFITKIEEENFLRKQRTFDNGVIPHQLHLEELEAILHQQAKYYPFLREDYEKIKSLVTFRIPYFVGPLAKGQSEFAWLTRKADGEIRPWNIEEKVDFGKSAVDFIEKMTNKDTYLPKENVLPKHSLCYQKYMVYNELTKVRYIDDQGKTNYFSGQEKQQIFNDLFKQKRKVKKKDLELFLRNINHIESPTIEGLEDSFNASYATYHDLLKVGLKQEILDNPLNTEMLEDIVKILTVFEDKRMIKEQLQQFSDVLDGVVLKKLERRHYTGWGRLSAKLLVGIREKQSHLTILDYLMNDDGLNRNLMQLINDSNLSFKSIIEKEQVSTTDKDLQSIVAELAGSPAIKKGILQSLKIVDELVSIMGYPPQTIVVEMARENQTTGKGKNNSKPRYKSLEKAIKEFGSQILKEHPTDNQELKNNRLYLYYLQNGKDMYTGQELDIHNLSNYDIDHIVPQSFITDNSIDNLVLTSSAGNREKGGDVPPLEIVRKRKVFWEKLYQGNLMSKRKFDYLTKAERGGLTDADKARFIHRQLVETRQITKNVANILHQRFNKETDNHGNTMEQVRIVTLKSALVSQFRKQFQLYKVREVNDYHHAHDAYLNGVVANTLLKVYPQLEPEFVYGEYHQFDWFKANKATAKKQFYTNIMLFFGQKERIIDENGEILWDKKYLETIKKVLDYRQMNIVKKTEIQKGEFSKATIKPKGNSSKLIPRKENWDPMKYGGLDSPNMAYAVIIEHAKGKKRIVIEKKLIQINIMERKMFEKDEEAFLEEKGYRHPKVLTKLPKYTLYECEKGRRRMLASANEAQKGNQLVLSNHLVSLLYHAKNCEASDGKSLKYIEAHRETFSELLAQVSEFATKYTLADANLSKINNLFEQNKEGDIKAIAQSFVDLMAFNAMGAPASFKFFEVTIDRKRYTNLKELLSSTIIYQSITGLYESRKRLDD
>NZ_CP013722.1|WP_023548322.1|1786178_1786658_+|hypothetical-protein
MKSLIIHKMHSSYFTNMSEVFNLLPEGELNCMWLVSSYECNIYPSEQIPFDKDYVWLKGTKLKEILNQKEIMFIWGNFTSYSSDTELKDVLKYLIPFADGNKDLWGKNVQLSNPLSNTELISWDSSIFLALSKNTSIIELLKANYPDSEDLSMYNSDID
>NZ_CP013722.1|WP_003723652.1|1785601_1785994_+|30S-ribosomal-protein-S9
MAQVQYYGTGRRKSSVARVRLVPGDGKIVINNRDWEDYIPFAALREVIKQPLVATETLGNYDVLVNVHGGGYTGQAGAIRHGVARALLQVAPEYRPALKSAGLLTRDSRMKERKKPGLKGARRAPQFSKR
>NZ_CP013722.1|WP_003727703.1|1785142_1785580_+|50S-ribosomal-protein-L13
MRTTYMAKPGEVERKWYVIDATGVSLGRLSSEVASILRGKNKPQFTPHIDTGDFVIIINAGKIGLTGKKATDKIYYRHSQYPGGLKSRTAGEMRTNNPEKLLELSIKGMLPKNSLGRQLFKKLHVYGGSEHEHAAQQPEVYELRG
>NZ_CP013722.1|WP_058876444.1|1784201_1784948_+|tRNA-pseudouridine(38-40)-synthase-TruA
MTRYKAIISYDGSGFYGYQVQPNTRTVQAEIEKALTKMHKGKTVRVTASGRTDTGVHAKGQVIHFDSELDITAEKFQKALQVMTPFDISFLTVEEVPDDFHARFGTVGKEYRYVVKRTKIFDPFSRNFALHYPYELDISKMKLASKRLIGEHDFTSFCSARTERDSKVRTLYSIDFYEEDDETLVIAFQGNGFLYNMVRILTGTLLDAGQGRIYPDDISEALLARDRQKLISKTAPPQGLYLWRVDYE
>NZ_CP013722.1|WP_023548321.1|1783398_1784196_+|energy-coupling-factor-transporter-transmembrane-protein-EcfT
MMDKMILGRYIPGNSWLHRIDPRAKITAVMAFIAIVFLANNWLTYALMFAYVLYLVLTSKVPFLFFIKGLQPIFWLILITLLLQVFFTKGGTVLVDLGLLQITTLGLANGAMMFCRFVLIIFMTTLLTLTTSPIELTDGLEKILAPFRLVHLPVHELALMLSISLRFIPTLMDETEKILKAQKARGVEFTSGKWSDRIKAIIPLLVPLFISAFKRAEDLAIAMEARGYRGGKGRTRFRLLRWRFADTFLLISLAVLSGLLFWLRS
>NZ_CP013722.1|WP_014602250.1|1782529_1783396_+|energy-coupling-factor-ABC-transporter-ATP-binding-protein
MEIKLEQLGYCYQKNSPFEKRALLDVNVSFDSGSYSAIIGHTGSGKSTLLQHLNALLMPTEGKITVGDREIVAGVKQKKLRDLRKKVGIVFQFPEAQLFEETVEKDICFGPMNFGVSEEDAKLRAKKVIYEVGLTEEILSRSPFELSGGQMRRVAIAGVLAMDPEVLVLDEPTAGLDPHGREEIMEMFYNLHKEKGLTTVLVTHSMEDAARYAEKIVLMKAGTVLQIGTPREIFAKPDELVDLGLSVPDVVRFQGLFERKFDVKLTKTCLTIDELTSEMAPYLAKGGA
>NZ_CP013722.1|WP_058876448.1|1795121_1795481_+|hypothetical-protein
MKKTSIIFILCALLSITACSNTENQTQATEATGTIEQVETDAILINNFKEKKDKYNPEAAIRFDIVDKYYDETGNKIKITDLNKNDDVKIILTNDFPIRETNPAQIDPKYVQKIIRLNK
>NZ_CP013722.1|WP_003733025.1|1795603_1796026_+|MerR-family-transcriptional-regulator
MNIKQAADLFGLTVDTLRYYERVGVIPPVHRNESGYRDYKTSDLNWVYLVKNLRNAGLSVESLIEFATLAQLRETQNVEAAQKQVLVDQLKELDEKLAEMKKVRELLVYKIDSYDSHIAQFKAGELNADNVEKLWERDKF
>NZ_CP013722.1|WP_058876449.1|1796047_1796899_+|aldo/keto-reductase
MKTVKLNNGVEVPILGFGTYQITDAAEAEQAVKDAIKAGYRHIDTAQSYMNEEAVGRGIAASGVDCKELFITTKIWVENVSYKGVMSSFDRSLKRLGLDYVDLLLIHQPFNDVYGAWIAMEELQASGKIRAIGVSNFSPDRVIDLAAFNEVTPQVNQIEVNPFQQQTANLAILRKEGVAIEAWAPFAEGKNDIFNNPVLTKIGAKYGKSAAQVILRWLVEQDIIVLAKSVNPERMAQNLAIFDFELTEADKEEIAGLDQGESQFFSHADPEMVKWMASRKLNV
>NZ_CP013722.1|WP_003723643.1|1796940_1798467_-|GW-domain-containing-glycosaminoglycan-binding-protein
MDRKFIKPGIILLIVAFLVVSINVGAETGGSRTAQVNLTTSQQAFIDEILPAAQDGYRDGKLLTSVTLAQAILESNWGESGLSQNSNNLFGIKGTYKGKSVSMGTMEASGSTTANFRVYPSWKESIEDHTALITENARYQDAVGETNYRKALQAIKDGGYATDPDYVSKLVAIIERYNLDKYDVIYDKIDSNQSLAAIGTVAENKKQEVIWSAPYNTEDANKIGTLENYSGRNLEISWEAKTEKGLWYFIRENNKDIGWVNSNALKINYHQKEDENVHLTKYVDDLSAHVYRLPSPEKQFDNGTIAKYDRKALQVDKKITRGGYAWFRISEGEKVIGWVRADKLNDRLYDRITEQTSYDGYALVSKSATDNVWTAPFNTKNAEKLAPLADYNNEKLEIVTRAKAGNTLWYQFKVDGKLVGWASEKDLNVFYTPAKEEPVKQVAYVKDPTAKLYNKPVESTSTNPKAVGFYYGKLLAVDKTATILGEDWLHLKDSQNSLGWIKAIDINS
>NZ_CP013722.1|WP_003733022.1|1798735_1799764_+|Mrp/NBP35-family-ATP-binding-protein
MLNEQQITRLLYRLQDPVLEASLEETEGVLEVQVLEETANIKIALADPAVETDHFVHNIEELLTQFGVNEINIELEYLPAAVIDRIFQARDNILSEASETKFLAIASGKGGVGKSTVSANLAIALAQQGKKVGLLDADIYGFSIPVLLGTTESPHKENGQIIPVETHGIQMISMDFFVEQGEPVIWRGPMLGKMIKMFLEEVRWGKLDYLLIDLPPGTGDVALDIHTLIPKCNELIVTTPHYAAASVASRAGYMAAKNNHKIIGVIENMSYLTLADGQVLKVFGQGGGEKVAADLETQLLIQLPIEQPEPNGNGYVSALFNSSSTSGKAYKTLAEKIIPYLS
>NZ_CP013722.1|WP_014601166.1|1805555_1806443_+|TetR/AcrR-family-transcriptional-regulator
MKEKKQRIIKSAKEVFQKQGYLKTSVQDMVDAAGISKGTFYNYFTSKEELAIVIFKQEYSVLHQRLEYTMGLDGTKKDNFTECLKIIIHFYTENGEILNITFSQTMIDDDFNAFLQNVRLKNMEWVKYQLLEVYGEETKPYINDITMLLSGMAAMYVFASGSKNVNTGLIERAIPYVVRRLDALVKDILESGEIVFTEADTENLVPDQTMIRKKRLAKLREALEELNVGIENADIADSDKWQYKESMNALVGEINNNEAPRDFMVQGTLLYLKQHVPASLTKEVNKLEACVNGLL
>NZ_CP013722.1|WP_003733258.1|1806543_1808025_+|multidrug-efflux-MFS-transporter
MNSTAVERPVDVNGKSYSRSLLVVTMIIGAFVAILNQTLLATALPMIMDDLHITAATGQWLTTAFLLTNGIMIPITALLIEKISSKTLFITAMTVFTIGTIIASVAGSFPILLTGRIVQAAGAGIMMPLLQTIFLLIFPREKRGAAMGLMGLVIAFAPAIGPTLSGWIVDSYDWRVLFLILIPIAVIDIILAFFGMKKVVKLTDTKIDFLSIVMSSIGFGALLYGFSSAGNDGWGDTTVITMLIVGVVVIALFVWRQLVIDNPMLELHVFKYPVFSLSVILGSIVTMAMIGAEIVLPLYIQTIRGESALQSGLLLLPGAIIMGIMSPITGIIFDKIGAKWLTITGVTILTIGTIPFMFLTMDTPLWYIVVFYAVRFFGISMAMMPVSTAGMNALPNHLINHGSAVNNTIRQIAGSIGTAVLITVLTNVTKDNMPGKALMATDPASFAQKAQDASLDGMRAAFMVAAIFAAIGMILSLFLKTKKQEPIVKEYTK
>NZ_CP013722.1|WP_009931305.1|1808072_1808915_-|S-adenosyl-l-methionine-hydroxide-adenosyltransferase-family-protein
MTKQLLVLQSDFGISDGAVSAMYGVINSVSIDLQIYDLTHQIPQFNIWEASYRLLQTVTYWPEDTIFVSIVDPGVGSKRRSVAVLTEDGHYIITPDNGTLTHIAHYGTIKAVRLIDEEKNRLPKSGASHTFHGRDIFAYTAARLAAGVINFEDIGPAANPDSIVSLSLSDSYLEGDQAFGTIDIIDRPFGNLWTNIRRTDFFELGANYGDSIEVLIKHHDRIVYKNFVTYSRSFADLRIGEALIYVNSLDNLGLGINQGSFVDAYSVGTGTSWKVTLKKV
>NZ_CP013722.1|WP_058876450.1|1809413_1812401_+|formate-dehydrogenase-subunit-alpha
MGAKVSVQINGVARDVVEGTRMLDYLNAEGIQHPHICYSEQIGPIQSCDTCMCEVDGELMRACSTNLTDGMEIKTNSELAKDAQLEAMDRILENHLLYCTVCDNNNGNCKVHNTTELLGVEKQERPYREKGYLNDFSHPFYRYDPDQCILCGRCVEACQQVQVNETLSIDWERSQPRVIWDDDRPANLSSCVSCGLCATVCPCNALMEKSMLGQAGFMTGLDEDMLEPMIDMVKKVEPNYQTVFAVSEMEAAMRETRTKKTKTVCTFCGVGCTFEVWTKDRKILKVEPTGEGPVNKFATCVKGKFGWDFVNSEKRITTPLIREGNEFVPASWEDAIHLVATKLREIQAKYGNDSLGFISSSKTTNEENYLMQKLARQVFETNNIDNCSRYCQAPASDGLTRTVGIGADSGTVEDIESAGLVIIVGASPADGHPVLASRIKRAQKTRGQKLIVSDLRKHEMAERSDLFIHPKQGTDFVWLTAVAKYMIDQGWHDEVFMENRISNVADYLAFLEPFTLEYAEKETGLSVETLKKVAQMVYEADGTAVCWGMGVTQNIAGSHTSSAIANLLLVTGNFGRHGAGAYPLRGHNNVQGACDMGSLPNVLPGIQPLGNDEVRARFEEAYGVSISPEPGLKNNEMLDAIEAGTLHSMYVIGEEMAWVDSNSNHVQEILASLDFFVVQDVFLSKTAQFADVVFPAAPSLEKEGTFTNTERRVQRLYEVLEPLGDSKPDWWIIQEVARACGRTDWNYDHPSDIMDEIASLAPFFAGVRYDRMQGFNSLVWPVSADGKDMPLLYEERFNFPDGKAQFSTLPYIAPITFPEEYNLTLNNGRLLEQFHEGNLTDKSKGLDYKLPEVFVEVSHELAKERDLESGSLVRLSSPYGRIKLRAVVTDRMKGNEVYVPMHSVSSETAVNLLTSSAGDVRTKTPAYKQTKVNLTVLEKTGKNPLPDHNPRNRKRFPQNGAEVARKWSREDYQPISKVNCACGGNCGCGGKGRNH
>NZ_CP013722.1|WP_003723285.1|1812400_1812877_+|DUF1641-domain-containing-protein
MAEPISTIRDTKKTPEELEKERLEQMKADIAEQDSGFIEILETVKLLQESGALEALNSAIKARGDITKTFLNEWRKEPMTNAINNMMISSKLLTDTKPEQTEEMIANLKNAAKKAEESAKNDEIMGMLAMMKALKDPDINRALRYGVTFLKEVGQTLK

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Crispr_ID: NZ_CP013722_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP013722_5

1933077-1933233

Orphan

Consensus_repeat	Method
ATTTAGGTAAATTTTGAAAATCAGG	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP013722_5

>merge|NZ_CP013722|5|1933077-1933233|CRISPRCasFinder
ATTTAGGTAAATTTTGAAAATCAGGTGTATTGGTTAATAAATTTGCATTTAAATCTAAAAATACGAGATTTGGTAAATTTTGAAAATCAGGAATAGTTGTCAATTGGTTAGAACTTAGATCTAACGTAATAAGTAAAGGAATATTATTAAAATTAGG

>NZ_CP013722|5|5|1933077-1933233|CRISPRCasFinder
ATTTAGGTAAATTTTGAAAATCAGG	TGTATTGGTTAATAAATTTGCATTTAAATCTAAAAATACGA
GATTTGGTAAATTTTGAAAATCAGG	AATAGTTGTCAATTGGTTAGAACTTAGATCTAACGTAATAA
GTAAAGGAATATTATTAAAATTAGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP013722.1\|WP_003722605.1\|1929593_1930562_+\|YvcK-family-protein	unknown	unknown	gnl\|CDD\|211689
NZ_CP013722.1\|WP_003722612.1\|1921560_1922058_+\|acyltransferase	unknown	unknown	gnl\|CDD\|100053
NZ_CP013722.1\|WP_003722610.1\|1923697_1924657_+\|thioredoxin-disulfide-reductase	unknown	unknown	gnl\|CDD\|273540
NZ_CP013722.1\|WP_012952017.1\|1926878_1928609_+\|phospho-sugar-mutase	unknown	unknown	gnl\|CDD\|100092
NZ_CP013722.1\|WP_009930948.1\|1922143_1923619_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|276809
NZ_CP013722.1\|WP_012952019.1\|1924775_1925759_+\|UDP-glucose-4-epimerase-GalE	unknown	unknown	gnl\|CDD\|224012
NZ_CP013722.1\|WP_003731218.1\|1939654_1940146_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|368753
NZ_CP013722.1\|WP_058876464.1\|1936212_1937649_+\|chitin-binding-protein	unknown	unknown	gnl\|CDD\|225932
NZ_CP013722.1\|WP_015987418.1\|1940889_1941126_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013722.1\|WP_026750232.1\|1925775_1926837_+\|galactose-mutarotase	unknown	unknown	gnl\|CDD\|185696
NZ_CP013722.1\|WP_003732491.1\|1934020_1935412_+\|amino-acid-permease	unknown	unknown	gnl\|CDD\|129987
NZ_CP013722.1\|WP_003722606.1\|1928716_1929592_+\|RNase-adapter-RapZ	unknown	unknown	gnl\|CDD\|235450
NZ_CP013722.1\|WP_003722600.1\|1935459_1936056_-\|ATP-dependent-Clp-endopeptidase-proteolytic-subunit-ClpP	unknown	unknown	gnl\|CDD\|178955
NZ_CP013722.1\|WP_009924964.1\|1931567_1932584_+\|NADPH-dehydrogenase-NamA	unknown	unknown	gnl\|CDD\|184110
NZ_CP013722.1\|WP_003731216.1\|1937924_1939055_-\|site-specific-integrase	unknown	unknown	gnl\|CDD\|271189
NZ_CP013722.1\|WP_003722604.1\|1930569_1931541_+\|DNA-binding-protein-WhiA	unknown	unknown	gnl\|CDD\|224398
NZ_CP013722.1\|WP_003731217.1\|1939118_1939628_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013722.1\|WP_003731220.1\|1940634_1940886_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_CP013722.1\|WP_003731222.1\|1941122_1941476_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013722.1\|WP_015987417.1\|1940177_1940486_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045

Protein	Function_ID	Function_description	E-value
NZ_CP013722.1\|WP_003722605.1\|1929593_1930562_+\|YvcK-family-protein	gnl\|CDD\|211689	TIGR01826, Putative_gluconeogenesis_factor, conserved hypothetical protein, cofD-related. This model represents a subfamily of conserved hypothetical proteins that forms a sister group to the family of CofD, (TIGR01819), LPPG:Fo 2-phospho-L-lactate transferase, an enzyme of cytochrome F420 biosynthesis. Both this family and TIGR01819 are within the scope of the pfam01933. [Hypothetical proteins, Conserved].	1.06416e-165
NZ_CP013722.1\|WP_003722612.1\|1921560_1922058_+\|acyltransferase	gnl\|CDD\|100053	cd04647, LbH_MAT_like, Maltose O-acyltransferase (MAT)-like: This family is composed of maltose O-acetyltransferase, galactoside O-acetyltransferase (GAT), xenobiotic acyltransferase (XAT) and similar proteins. MAT and GAT catalyze the CoA-dependent acetylation of the 6-hydroxyl group of their respective sugar substrates. MAT acetylates maltose and glucose exclusively while GAT specifically acetylates galactopyranosides. XAT catalyzes the CoA-dependent acetylation of a variety of hydroxyl-bearing acceptors such as chloramphenicol and streptogramin, among others. XATs are implicated in inactivating xenobiotics leading to xenobiotic resistance in patients. Members of this family contain a a left-handed parallel beta-helix (LbH) domain with at least 5 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). They are trimeric in their active form.	1.81171e-27
NZ_CP013722.1\|WP_003722610.1\|1923697_1924657_+\|thioredoxin-disulfide-reductase	gnl\|CDD\|273540	TIGR01292, Thioredoxin_reductase, thioredoxin-disulfide reductase. This model describes thioredoxin-disulfide reductase, a member of the pyridine nucleotide-disulphide oxidoreductases (pfam00070). [Energy metabolism, Electron transport].	3.0648e-149
NZ_CP013722.1\|WP_012952017.1\|1926878_1928609_+\|phospho-sugar-mutase	gnl\|CDD\|100092	cd05799, PGM2, This CD includes PGM2 (phosphoglucomutase 2) and PGM2L1 (phosphoglucomutase 2-like 1). The mammalian PGM2 is thought to be a phosphopentomutase that catalyzes the conversion of the nucleoside breakdown products, ribose-1-phosphate and deoxyribose-1-phosphate to the corresponding 5-phosphopentoses. PGM2L1 is thought to catalyze the 1,3-bisphosphoglycerate-dependent synthesis of glucose 1,6-bisphosphate and other aldose-bisphosphates that serve as cofactors for several sugar phosphomutases and possibly also as regulators of glycolytic enzymes. PGM2 and PGM2L1 belong to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Other members of this superfamily include phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.	0
NZ_CP013722.1\|WP_009930948.1\|1922143_1923619_+\|hypothetical-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	1.99642e-10
NZ_CP013722.1\|WP_012952019.1\|1924775_1925759_+\|UDP-glucose-4-epimerase-GalE	gnl\|CDD\|224012	COG1087, GalE, UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane].	0
NZ_CP013722.1\|WP_003731218.1\|1939654_1940146_-\|hypothetical-protein	gnl\|CDD\|368753	pfam06114, Peptidase_M78, IrrE N-terminal-like domain. This entry includes the catalytic domain of the protein ImmA, which is a metallopeptidase containing an HEXXH zinc-binding motif from peptidase family M78. ImmA is encoded on a conjugative transposon. Conjugating bacteria are able to transfer conjugative transposons that can, for example, confer resistance to antibiotics. The transposon is integrated into the chromosome, but during conjugation excises itself and then moves to the recipient bacterium and re-integrate into its chromosome. Typically a conjugative tranposon encodes only the proteins required for this activity and the proteins that regulate it. During exponential growth, the ICEBs1 transposon of Bacillus subtilis is inactivated by the immunity repressor protein ImmR, which is encoded by the transposon and represses the genes for excision and transfer. Cleavage of ImmR relaxes repression and allows transfer of the transposon. ImmA has been shown to be essential for the cleavage of ImmR. This domain is also found in in metalloprotease IrrE, a central regulator of DNA damage repair in Deinococcaceae, HTH-type transcriptional regulators RamB and PrpC.	0.00113194
NZ_CP013722.1\|WP_058876464.1\|1936212_1937649_+\|chitin-binding-protein	gnl\|CDD\|225932	COG3397, COG3397, Uncharacterized protein conserved in bacteria [Function unknown].	6.33284e-103
NZ_CP013722.1\|WP_026750232.1\|1925775_1926837_+\|galactose-mutarotase	gnl\|CDD\|185696	cd09019, galactose_mutarotase_like, galactose mutarotase_like. Galactose mutarotase catalyzes the conversion of beta-D-galactose to alpha-D-galactose. Beta-D-galactose is produced by the degradation of lactose, a disaccharide composed of beta-D-glucose and beta-D-galactose. This epimerization reaction is the first step in the four-step Leloir pathway, which converts galactose into metabolically important glucose. This epimerization step is followed by the phosophorylation of alpha-D-galactose by galactokinase, an enzyme which can only act on the alpha anomer. A glutamate and a histidine residue of the galactose mutarotase have been shown to be critical for catalysis, the glutamate serves as the active site base to initiate the reaction by removing the proton from the C-1 hydroxyl group of the sugar substrate, and the histidine as the active site acid to protonate the C-5 ring oxygen. Galactose mutarotase is a member of the aldose-1-epimerase superfamily.	6.29357e-148
NZ_CP013722.1\|WP_003732491.1\|1934020_1935412_+\|amino-acid-permease	gnl\|CDD\|129987	TIGR00909, putative_amino_acid_transporter, amino acid transporter. [Transport and binding proteins, Amino acids, peptides and amines].	7.80162e-139
NZ_CP013722.1\|WP_003722606.1\|1928716_1929592_+\|RNase-adapter-RapZ	gnl\|CDD\|235450	PRK05416, PRK05416, RNase adapter RapZ.	1.97711e-175
NZ_CP013722.1\|WP_003722600.1\|1935459_1936056_-\|ATP-dependent-Clp-endopeptidase-proteolytic-subunit-ClpP	gnl\|CDD\|178955	PRK00277, clpP, ATP-dependent Clp protease proteolytic subunit; Reviewed.	2.30261e-143
NZ_CP013722.1\|WP_009924964.1\|1931567_1932584_+\|NADPH-dehydrogenase-NamA	gnl\|CDD\|184110	PRK13523, PRK13523, NADPH dehydrogenase NamA; Provisional.	0
NZ_CP013722.1\|WP_003731216.1\|1937924_1939055_-\|site-specific-integrase	gnl\|CDD\|271189	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons. This family of tyrosine based site-specific integrases is has origins in bacterial phages and conjugate transposons. One member is the integrase from Bacillus subtilis conjugative transposon ICEBs1. ICEBs1 can be excised and transfered to various recipients in response to DNA damage or high concentrations of potential mating partners. The family belongs to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The catalytic domain contains six conserved active site residues. Their overall reaction mechanism involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA.	1.48701e-38
NZ_CP013722.1\|WP_003722604.1\|1930569_1931541_+\|DNA-binding-protein-WhiA	gnl\|CDD\|224398	COG1481, COG1481, Uncharacterized protein conserved in bacteria [Function unknown].	7.47224e-145
NZ_CP013722.1\|WP_003731220.1\|1940634_1940886_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	6.0781e-09
NZ_CP013722.1\|WP_015987417.1\|1940177_1940486_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	4.32343e-14

>NZ_CP013722.1|WP_009924964.1|1931567_1932584_+|NADPH-dehydrogenase-NamA
MSKLFSEYKLKDVTLKNRIVMSPMCMYSVENKDGIATDFHFAHYVSRAAGGTGLVILEATAVQEVGRISEFDLGLWNDEQVPALKKLVDGLHYHGAKAGIQLAHAGRKAVLPGEIVAPSAIAFDEKSDKPVELTKEAIKEVVADFKRAAYRAKEAGFDVIEIHAAHGYLIHQFLSPITNRREDNYGGPAGNRYKILSDIIKAVKEVWDGPIIVRVSATDYAHGGLQLEDHIPFAKWMKADGVELIDVSTGGLVNVAPPVFPGYQVPFADEIRRGAGIATGALGLITRGEQAEEILCNERADLIIVGRELLRNPYFAKDAAKQLGETIEAPKQYSRAWK
>NZ_CP013722.1|WP_003722604.1|1930569_1931541_+|DNA-binding-protein-WhiA
MSFASETKKELTHMDVSDSDAKVELAAFIRMNGAISFSSQLVIMDVQTENAAIARRMYQLLKDLYEVPIELLVRRKMKLKKNNVYIVRLKSGTRGILEDLRILEPPMTFTKSIDRGFVKKRSAKRAYLRGAFLASGSVNNPETSSYHLEIFSVYEEHNEAICALMNQFDLNARTLERKNGFITYLKEAEKITEFLSIIGATSALLHFEDVRIMRDMRNSVNRLVNCETANLNKTINAAVRQIDNIKYIQSTVGLEALPERLREIAALRIANEDVTLKELGEMLTTGQVSKSGINHRLRKLDQIAERLRSGETPAQVGLKISNS
>NZ_CP013722.1|WP_003722605.1|1929593_1930562_+|YvcK-family-protein
MKKETKPRVVVIGGGTGLPVILKGLKKKDIHLTAIVTVADDGGSSGKIREQMDVLPPGDIRNVMLALSNVDPRVVDLFQYRFAVDGDLSGHVIGNLILTALSQLNDSYVDAINVLATVLKIRGKVIPATDQPLILNAEMEDGSIVHGESLIPLQGKHINRVYIEPENVKPYPTAVEAVKEADLIVIGPGSLYTSILPNLLLTELADEITASKAPKVYITNILTQIGETDFFSDADHIKVIHEHVGKSFIDKTLINTTTVPKELLFPEDVAQVEHNAKGMEELGVEAIYQDFLSTEDGLVRHAAEKVADALLAMLPNQTNEKE
>NZ_CP013722.1|WP_003722606.1|1928716_1929592_+|RNase-adapter-RapZ
MASKQLKLVIITGMSGAGKTVAMQSLEDLGYFCVDNLPPSLLPKFWELMKESDKMDKIALVMDLRGREFFDSIEPALDELDNTNFITTKILFLEADDKVLVSRYKETRRHHPLEPNGSVLDGINAERELLSDLKGRSQLVINTSNMAPRELRERINNEFQTEDKDIFNVQLMSFGFKYGIPIDADLVFDVRFLPNPHYIDKMRPLTGLDEDVYEYVMKWPETQTFLDKLVDLLMFTLPFYKREGKTQLVIAIGCTGGQHRSVALTEFVGKAIQQKYETTISHRDMKRRKGR
>NZ_CP013722.1|WP_012952017.1|1926878_1928609_+|phospho-sugar-mutase
MNWQEEYQKWVANDKLDSTLRKQLTNMETNEKELEDSFYRNMEFGTAGMRGVLGAGTNRMNIYTIRKASLGLAQFVAENGEEAKKRGIVIAYDPRHMSREFAFESAAVLGHHGVKSYVFDALRPTPELSFAVRHLNAFGGIVITASHNPPEYNGYKIYGEDGGQMPPTGASAVIEYINAVEDIFSVEVANQELLIENGLLEVISEKVDRPYLEKLKEVIVNKELVQERGEDLKIVFTPLHGTGGILGVPALESVGFTNIVKVDEQFVNDPDFGTVKSPNPENREAFLLAIEYGKKFGGDILVGTDPDADRLGVAVRNADGEYEVLSGNQIGAIILHYLLKQKKAQNELPANAAVLKSIVTSNLGTEIAKHYGAEMIEVLTGFKFIAEQIKHFEETGKHTFEFGYEESNGYMVKPFTRDKDAIQAVLAVAEVALVSKVAGRTLLEDLDQIYDEFGYYNEDLVSLTLSGKDGSRRIKEITSSFREQLPTSMGGFVVERAEDYLRSETTWIATGKTEAIHLPTADVIKCYFEDGSWFCLRPSGTEPKIKFYFSIRGENKEESTAKLEKVKADLMQHIEA
>NZ_CP013722.1|WP_026750232.1|1925775_1926837_+|galactose-mutarotase
MIFIEVMKERFGEFEGETVWKWTMINDHDMRMSVLNYGAIVTSLETKDKFGDFANISLGFTNLDDYLAHSPYFGATLGPVAGRITNGQFSLDGKQFQLIQNEGSNHRHGGKFNFSKKLWDVSVEKSLDQIVMTFEYCWADGENGYPGKIDAKMTYTLNNKNEWLIDYEARSNQPTIYNPSNHIYFNLSGEVGSTVLQHQLWVNSDSFLPIDEEFLPIGEKRLAENTIFDLRAGREVAEITQSQDQQVKLVGAGLDHTFILKHENGRPDAVLFDPKSGRRLEMETKADSVLIYTANSLDGSFEIDERAVPKYAGITMETQGLVDAINHDGFGDIVLRPEKPFTSRTAFRFTVES
>NZ_CP013722.1|WP_012952019.1|1924775_1925759_+|UDP-glucose-4-epimerase-GalE
MGIAVLGGAGYIGSHAVDELITRGYEVVVIDNLRTGHRESIHKKAKFYEGDIRDKAFLSSVFEKEKVDGVIHFAASSLVGESMEVPLDYLNNNVYGTQIVLEVMEEFDVKHIVFSSSAATYGEPERVPITEDMPTNPESTYGETKLIMEKMMKWCDKAYGMKFVALRYFNVAGAKADGSIGEDHKPESHLVPIILQVALGQREKLAIYGDDYNTPDGTCIRDYVQVEDLIDAHIRALEYLKNGGESNIFNLGSSNGFSVKEMLEAARTVTGKEIPAEVVPRRAGDPGTLIASSDKASEILGWEPTYTDVKDIIATAWKWHVSHPNGY
>NZ_CP013722.1|WP_003722610.1|1923697_1924657_+|thioredoxin-disulfide-reductase
MASEEKIYDVIIIGAGPAGMTAALYTSRADLDTLMIERGVPGGQMVNTAEVENYPGFDSILGPDLSDKMLSGAKQFGAEYAYGDIKEVVDGKEFKTVTAGSKTYKARAIIIATGAEHRKLGAAGEEELSGRGVSYCAVCDGAFFKNRELIVVGGGDSAVEEGTYLTRYADKVTIVHRRDKLRAQQILQDRAFKDEKVDFIWNSTVEEIVGDGKKVTGAKLVSTVDGSESIMPVDGVFIYVGLVPLTKAFLNLGITDDEGYIVTDEEMRTNLPGIFAAGDVRAKSLRQIVTATGDGGLAGQNAQKYVEELKESLEAEAAK
>NZ_CP013722.1|WP_009930948.1|1922143_1923619_+|hypothetical-protein
MEKDKKIPAKIYPFYPNGQFYFERGVEAFRDQRIKEAIRYLVRASELEPGEAVILCQLAICYTEIGQFHKSNQLLREVLEQRNGNMEYCYYFIANNFAYMKDYRRALQYANRYLDSSTDGEYTEEAKDLIEVLLEETPFGETIENGFSKLEQEFYSYKKEINRYLAEEDSASACDILRKVIDEKPNFWPAYNQLASLYFEQLKEEEGVRVLSDLLSRNPGNLLGICDLFIYHFYKGNRKEADELYLELRDVLPVLAHHKEKLGLIHAMMGEYEEADDLLEQVADLEVTERSKYYYFRAKSSYYLGDVEGAKMFWHSFLECDLYEDVRFPWEQEPDLTNDTRLVLEMLQEEDDLTHMLGVYALTISGNRPELVLFHPLLDMSDWSYMEHLMFTNFDYFPDGAIEQNGYLIAKAMIILKENGILLNEEYMALYKQMFSLVLIDAGKDLILGRYTIETVASAIAKLFLPHLKLQLVEEFECSKCARDIERVLSR
>NZ_CP013722.1|WP_003722612.1|1921560_1922058_+|acyltransferase
MRRLDRFNAPDDTVNTLFQVYKTISFWKVLKNTLVIEFGRFFPWMGGKRKIYRVCLGMEIGEKTAIAYKVMPDLFFPEKILIGENSIIGYHTTILTHEYLLSEYRVGEVVIGRDVMVGANVTILPGTVIGDGAVIAAGAVVSVDVPAGSFAYGNPLIIKEKATLT
>NZ_CP013722.1|WP_003732491.1|1934020_1935412_+|amino-acid-permease
MTKVNSFFRKKSFHNPATDKHHLNKSLGAFDLTMLGVGAVVGGGIFILPGQVASVIAGPGIIISFIIAGIACCLAALCYSEFASKLPVAGSAYTYSYHVFGEGVAWILGWSLILEYGLAVAAIASGWSSYMKSLLAGFDLHIPTAISSAYDPSAGTYFDLLAFVVVMVIGILLSFGIRESTRVNNIMVLVKIAVVVLFILVGAFYVKPDNWTPFLPFGVQGVITGASTVFFAYIGFDAVSSAAEEVKNPQKNMPIGIISSLAVCTLLYILLSAVLTGVVPYTDLVDVSAPVAFALQAINQNWIAGLLSVGAIVGMTTVVLVMSYGGTRLLFAMGRDGLLPKSFSKISKNDTPVRNTMIFATVMGLIASTVPMADLAQLINIGTLFAFAMVSIGIFFLRRNPDLNQKGFKTPFYPVVPALSFLLCVYLMINLSKTTWIAFGIWFVIGILVYTFYGRKHSALRIK
>NZ_CP013722.1|WP_003722600.1|1935459_1936056_-|ATP-dependent-Clp-endopeptidase-proteolytic-subunit-ClpP
MNLIPTVIEQTSRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLDAQDPEKDIFLYINSPGGSISAGMAIYDTMNFVKADVQTIGMGMAASMGSFLLTAGANGKRFALPNAEIMIHQPLGGAQGQATEIEIAARHILKIKERMNTIMAEKTGQPYEVIARDTDRDNFMTAQEAKDYGLIDDIIINKSGLKG
>NZ_CP013722.1|WP_058876464.1|1936212_1937649_+|chitin-binding-protein
MKKMTKIGMFFAVFTLAVVLFQTTASAHGYISKPASRVYLANKGINVGVGSAQYEPQSVEAPKGFPISGPADGSIAGGGKYSLLDEQSASRWAKVDIESGPLTVEWTLTAPHKTSSWQYFITKKGWDPNKPLTRSSLEPLATIEADGSVPNALAKQEINIPNDRSGYYVILGVWNIADTGNAFYQVIDANIINSDITPVADTEAPTKPTNLAATTTTKTVSLAWNASTDNVGIKGYEILRDGVVIGESQTASYEDTTVESNTAYTYTVRAKDFAGNKSTLSNSINVTTKEVPAVDNEAPTAPKSLMSHGQTDTTIALCWQASTDNVEVKNYEIYRNNTKIATSTKTMFEDTKLASNTSYNYKVYAVDTSGNRSLVSNEIIIKTKTLDPLNTWKSDQIYNAGDQVYYNGVAYTAKWWTKGNTPDTSDVWQTASTDIQTWNVQKAYNGGDKVTYNGKTYQAKWWVRGEKPDSSSIWTLLN
>NZ_CP013722.1|WP_003731216.1|1937924_1939055_-|site-specific-integrase
MANIVKTETGWKYRVSYKEAGKYKVKSKSGFPTKKQALLAASEMEEKLHRGVDINAGEANFVEAFKEWYTTFRKQKKSIENDKHYDYAIKFCEKYFVGLKINDVNRTTYQKAINEFAKTHAKETTRKRHVYVRSFIREMVYEGVILRDPTARVIIPDDETTYKDLKALSEEQVKKLVKELNNHFNPIHSSISVILFAIASGARFSEIIGLTWDCIDFVQKTIKINKTWDYKDTNTFSNTKNYSSNRIITIDDSTLSMLNKIKVYQSAEKLKDSSFNKNKLVFINTNNIPPSNNAINKSLRRYCTKLGINIAISVHGLRHTHATLLLYNDCNIKYLSKRLGHNTIVTTLETYSHVIDEMEQKESYKVNELMDKINEI
>NZ_CP013722.1|WP_003731217.1|1939118_1939628_-|hypothetical-protein
MKKILFCLTLLTVSFGLVSCGQTKDGKEYSYAGVTINKNDFNNIQEYEEEARSLYTTITTFNPAKDGNEVINDIVENGNKLKTTINKDLNQKEKKENVQSVLLYENVSIIGIPKNAIKYSREITDTEMVLINQNFKALNDIEANKITTDKKSSEKIINELNDNIGIEVN
>NZ_CP013722.1|WP_003731218.1|1939654_1940146_-|hypothetical-protein
MNKTSSELKQEFPELNFIIDNSLPTKLFGFIQNKVVHLHPSLTESELRCTIIEEAMHWKYTVGDITNFNNIDNIKQEKFARRKSHEYLVNLQTLALCYDLGYRTYYEAATFLNVTEKFLIEVVENYREKYGLMYNNGNYIIHFGPTIQVFQEDNSFYPYDYGC
>NZ_CP013722.1|WP_015987417.1|1940177_1940486_-|helix-turn-helix-transcriptional-regulator
MKVNEMIINLREKRNISQRELANRIGINKSVMNRIESGERDIRAHELEAIANYFDVSADYLLGREEFDNSDLLAAHIDDDLTEDERIEIEKYLKFIRSQKEE
>NZ_CP013722.1|WP_003731220.1|1940634_1940886_+|helix-turn-helix-transcriptional-regulator
MQVEIDLKYIREKRESLGFSQKDMAIKLGFKNASTYLKYETGEYKIKAEMLPLLAKILKCNISNFFTKNVAKTETGDFAKIGG
>NZ_CP013722.1|WP_015987418.1|1940889_1941126_+|hypothetical-protein
MSNEELTLSIKTSQREDGSAYNAIQLGDWKVGRFVTGIHLEILGGERPKLIIECYPERIDVDGLEVEAFLKQIEEGEK
>NZ_CP013722.1|WP_003731222.1|1941122_1941476_+|hypothetical-protein
MNNIKQAIIKLETILENGNAIESGSFVKYSVIKNILNLLEKDQELKIIEMEVELNGVEDSIENAALLEKRLSEAKSLVEDLASTINSLEIKVNSKEEIREAEKSIKLRHFATPSTDF

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Identity
NZ_CP013722_1	1.11\|976812\|36\|NZ_CP013722\|CRISPRCasFinder,CRT,PILER-CR	976812-976847	36	NZ_CP013722.1	1946867-1946902	1.0
NZ_CP013722_1	1.15\|977073\|34\|NZ_CP013722\|CRISPRCasFinder,CRT,PILER-CR	977073-977106	34	NZ_CP013722.1	983148-983181	1.0
NZ_CP013722_2	2.8\|996743\|35\|NZ_CP013722\|CRT	996743-996777	35	NZ_CP013722.1	1970471-1970505	1.0

1. spacer 1.11|976812|36|NZ_CP013722|CRISPRCasFinder,CRT,PILER-CR matches to position: 1946867-1946902, mismatch: 0, identity: 1.0

cgctgtaattgacttaatacttgtgacgaattcacc	CRISPR spacer
cgctgtaattgacttaatacttgtgacgaattcacc	Protospacer
************************************

2. spacer 1.15|977073|34|NZ_CP013722|CRISPRCasFinder,CRT,PILER-CR matches to position: 983148-983181, mismatch: 0, identity: 1.0

gaagaaacaattcaagaacatacggataatttat	CRISPR spacer
gaagaaacaattcaagaacatacggataatttat	Protospacer
**********************************

3. spacer 2.8|996743|35|NZ_CP013722|CRT matches to position: 1970471-1970505, mismatch: 0, identity: 1.0

gaaattgtaaaatctatatccgttgattcaacaaa	CRISPR spacer
gaaattgtaaaatctatatccgttgattcaacaaa	Protospacer
***********************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP013722_1	1.11\|976812\|36\|NZ_CP013722\|CRISPRCasFinder,CRT,PILER-CR	976812-976847	36	MH341452	Listeria phage PSU-VKH-LP040, complete genome	32247-32282	0	1.0
NZ_CP013722_1	1.30\|978044\|36\|NZ_CP013722\|CRISPRCasFinder,CRT,PILER-CR	978044-978079	36	NC_003216	Listeria phage A118, complete genome	18563-18598	0	1.0
NZ_CP013722_1	1.30\|978044\|36\|NZ_CP013722\|CRISPRCasFinder,CRT,PILER-CR	978044-978079	36	AJ242593	Bacteriophage A118 complete genome	18563-18598	0	1.0
NZ_CP013722_2	2.8\|996743\|35\|NZ_CP013722\|CRT	996743-996777	35	DQ003642	Listeria phage A006, complete genome	15712-15746	0	1.0
NZ_CP013722_2	2.9\|996807\|36\|NZ_CP013722\|CRT	996807-996842	36	MT500540	Listeria phage LP-HM00113468, complete genome	683-718	0	1.0
NZ_CP013722_2	2.9\|996807\|36\|NZ_CP013722\|CRT	996807-996842	36	NC_009812	Listeria phage B025, complete genome	3896-3931	0	1.0
NZ_CP013722_2	2.9\|996807\|36\|NZ_CP013722\|CRT	996807-996842	36	KJ094023	Listeria phage LP-101, complete genome	3936-3971	0	1.0
NZ_CP013722_2	2.14\|997128\|35\|NZ_CP013722\|CRT	997128-997162	35	NZ_LR134403	Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence	214611-214645	0	1.0
NZ_CP013722_2	2.14\|997128\|35\|NZ_CP013722\|CRT	997128-997162	35	MT500540	Listeria phage LP-HM00113468, complete genome	39834-39868	0	1.0
NZ_CP013722_2	2.14\|997128\|35\|NZ_CP013722\|CRT	997128-997162	35	KJ094023	Listeria phage LP-101, complete genome	5084-5118	0	1.0
NZ_CP013722_4	4.2\|1793260\|30\|NZ_CP013722\|CRISPRCasFinder,CRT	1793260-1793289	30	KJ094022	Listeria phage LP-030-3, complete genome	13644-13673	0	1.0
NZ_CP013722_4	4.5\|1793458\|30\|NZ_CP013722\|CRISPRCasFinder,CRT	1793458-1793487	30	DQ003637	Listeria phage A500, complete genome	29577-29606	0	1.0
NZ_CP013722_4	4.5\|1793458\|30\|NZ_CP013722\|CRISPRCasFinder,CRT	1793458-1793487	30	KJ094022	Listeria phage LP-030-3, complete genome	39146-39175	0	1.0
NZ_CP013722_4	4.11\|1793854\|30\|NZ_CP013722\|CRISPRCasFinder,CRT	1793854-1793883	30	NC_003216	Listeria phage A118, complete genome	8554-8583	0	1.0
NZ_CP013722_4	4.11\|1793854\|30\|NZ_CP013722\|CRISPRCasFinder,CRT	1793854-1793883	30	AJ242593	Bacteriophage A118 complete genome	8554-8583	0	1.0
NZ_CP013722_4	4.14\|1794052\|30\|NZ_CP013722\|CRISPRCasFinder,CRT,PILER-CR	1794052-1794081	30	NC_003216	Listeria phage A118, complete genome	18220-18249	0	1.0
NZ_CP013722_4	4.14\|1794052\|30\|NZ_CP013722\|CRISPRCasFinder,CRT,PILER-CR	1794052-1794081	30	AJ242593	Bacteriophage A118 complete genome	18220-18249	0	1.0
NZ_CP013722_4	4.16\|1794184\|30\|NZ_CP013722\|CRISPRCasFinder,CRT,PILER-CR	1794184-1794213	30	NZ_LR134403	Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence	215250-215279	0	1.0
NZ_CP013722_4	4.16\|1794184\|30\|NZ_CP013722\|CRISPRCasFinder,CRT,PILER-CR	1794184-1794213	30	KJ094023	Listeria phage LP-101, complete genome	5723-5752	0	1.0
NZ_CP013722_4	4.19\|1794382\|31\|NZ_CP013722\|CRISPRCasFinder,CRT,PILER-CR	1794382-1794412	31	MH341453	Listeria phage PSU-VKH-LP041, complete genome	828-858	0	1.0
NZ_CP013722_4	4.19\|1794382\|31\|NZ_CP013722\|CRISPRCasFinder,CRT,PILER-CR	1794382-1794412	31	NC_009813	Listeria phage B054, complete genome	828-858	0	1.0
NZ_CP013722_1	1.3\|976292\|37\|NZ_CP013722\|CRISPRCasFinder,CRT,PILER-CR	976292-976328	37	KY705255	Streptococcus phage P0095, complete genome	33666-33702	1	0.973
NZ_CP013722_1	1.3\|976292\|37\|NZ_CP013722\|CRISPRCasFinder,CRT,PILER-CR	976292-976328	37	KY705251	Streptococcus phage P0091, complete genome	32778-32814	1	0.973
NZ_CP013722_1	1.3\|976292\|37\|NZ_CP013722\|CRISPRCasFinder,CRT,PILER-CR	976292-976328	37	KX879643	Streptococcus phage CHPC1151, complete genome	31697-31733	1	0.973
NZ_CP013722_1	1.3\|976292\|37\|NZ_CP013722\|CRISPRCasFinder,CRT,PILER-CR	976292-976328	37	MK202161	Streptococcus phage CHPC1282, complete genome	32484-32520	1	0.973
NZ_CP013722_1	1.3\|976292\|37\|NZ_CP013722\|CRISPRCasFinder,CRT,PILER-CR	976292-976328	37	KY705252	Streptococcus phage P0092, complete genome	31845-31881	1	0.973
NZ_CP013722_1	1.3\|976292\|37\|NZ_CP013722\|CRISPRCasFinder,CRT,PILER-CR	976292-976328	37	MH937506	Streptococcus phage CHPC1148, complete genome	35552-35588	1	0.973
NZ_CP013722_1	1.3\|976292\|37\|NZ_CP013722\|CRISPRCasFinder,CRT,PILER-CR	976292-976328	37	KY705253	Streptococcus phage P0093, complete genome	32631-32667	1	0.973
NZ_CP013722_1	1.3\|976292\|37\|NZ_CP013722\|CRISPRCasFinder,CRT,PILER-CR	976292-976328	37	KY705254	Streptococcus phage P0094, complete genome	31034-31070	1	0.973
NZ_CP013722_1	1.6\|976489\|36\|NZ_CP013722\|CRISPRCasFinder,CRT,PILER-CR	976489-976524	36	NC_021539	Listeria phage LP-030-2, complete genome	14044-14079	1	0.972
NZ_CP013722_1	1.6\|976489\|36\|NZ_CP013722\|CRISPRCasFinder,CRT,PILER-CR	976489-976524	36	AJ312240	Bacteriophage PSA complete genome	14022-14057	1	0.972
NZ_CP013722_1	1.8\|976617\|35\|NZ_CP013722\|CRISPRCasFinder,CRT,PILER-CR	976617-976651	35	NC_009813	Listeria phage B054, complete genome	21546-21580	1	0.971
NZ_CP013722_1	1.11\|976812\|36\|NZ_CP013722\|CRISPRCasFinder,CRT,PILER-CR	976812-976847	36	MH341451	Listeria phage PSU-VKH-LP019, complete genome	31286-31321	1	0.972
NZ_CP013722_1	1.43\|978889\|36\|NZ_CP013722\|CRISPRCasFinder,CRT,PILER-CR	978889-978924	36	MH299806	Listeria phage LP-KV022, complete genome	52242-52277	1	0.972
NZ_CP013722_1	1.43\|978889\|36\|NZ_CP013722\|CRISPRCasFinder,CRT,PILER-CR	978889-978924	36	JB137888	Sequence 7 from Patent WO2012159774	1068-1103	1	0.972
NZ_CP013722_1	1.43\|978889\|36\|NZ_CP013722\|CRISPRCasFinder,CRT,PILER-CR	978889-978924	36	MN114083	Listeria phage LP-013, complete genome	47769-47804	1	0.972
NZ_CP013722_1	1.43\|978889\|36\|NZ_CP013722\|CRISPRCasFinder,CRT,PILER-CR	978889-978924	36	NC_021785	Listeria phage LP-110, complete genome	9960-9995	1	0.972
NZ_CP013722_1	1.43\|978889\|36\|NZ_CP013722\|CRISPRCasFinder,CRT,PILER-CR	978889-978924	36	KJ094026	Listeria phage LP-032 contig 3, partial genome	10576-10611	1	0.972
NZ_CP013722_1	1.43\|978889\|36\|NZ_CP013722\|CRISPRCasFinder,CRT,PILER-CR	978889-978924	36	MN128593	Listeria phage LP-031, complete genome	47058-47093	1	0.972
NZ_CP013722_1	1.43\|978889\|36\|NZ_CP013722\|CRISPRCasFinder,CRT,PILER-CR	978889-978924	36	NC_021787	Listeria phage LP-037, complete genome	4439-4474	1	0.972
NZ_CP013722_1	1.43\|978889\|36\|NZ_CP013722\|CRISPRCasFinder,CRT,PILER-CR	978889-978924	36	MN904502	Listeria phage LP-018, complete genome	47217-47252	1	0.972
NZ_CP013722_1	1.43\|978889\|36\|NZ_CP013722\|CRISPRCasFinder,CRT,PILER-CR	978889-978924	36	JX442241	Listeria phage P70, complete genome	54376-54411	1	0.972
NZ_CP013722_1	1.43\|978889\|36\|NZ_CP013722\|CRISPRCasFinder,CRT,PILER-CR	978889-978924	36	KJ094020	Listeria phage LP-026, complete genome	30591-30626	1	0.972
NZ_CP013722_1	1.43\|978889\|36\|NZ_CP013722\|CRISPRCasFinder,CRT,PILER-CR	978889-978924	36	MN114082	Listeria phage LP-010, complete genome	47054-47089	1	0.972
NZ_CP013722_2	2.1\|996742\|36\|NZ_CP013722\|PILER-CR,CRISPRCasFinder	996742-996777	36	DQ003642	Listeria phage A006, complete genome	15711-15746	1	0.972
NZ_CP013722_2	2.2\|996806\|37\|NZ_CP013722\|PILER-CR,CRISPRCasFinder	996806-996842	37	MT500540	Listeria phage LP-HM00113468, complete genome	682-718	1	0.973
NZ_CP013722_2	2.2\|996806\|37\|NZ_CP013722\|PILER-CR,CRISPRCasFinder	996806-996842	37	NC_009812	Listeria phage B025, complete genome	3896-3932	1	0.973
NZ_CP013722_2	2.2\|996806\|37\|NZ_CP013722\|PILER-CR,CRISPRCasFinder	996806-996842	37	KJ094023	Listeria phage LP-101, complete genome	3936-3972	1	0.973
NZ_CP013722_2	2.3\|996871\|36\|NZ_CP013722\|PILER-CR,CRISPRCasFinder	996871-996906	36	NC_021539	Listeria phage LP-030-2, complete genome	18926-18961	1	0.972
NZ_CP013722_2	2.3\|996871\|36\|NZ_CP013722\|PILER-CR,CRISPRCasFinder	996871-996906	36	KJ094023	Listeria phage LP-101, complete genome	22882-22917	1	0.972
NZ_CP013722_2	2.5\|996998\|36\|NZ_CP013722\|PILER-CR,CRISPRCasFinder	996998-997033	36	MH341453	Listeria phage PSU-VKH-LP041, complete genome	10139-10174	1	0.972
NZ_CP013722_2	2.7\|997127\|36\|NZ_CP013722\|PILER-CR,CRISPRCasFinder	997127-997162	36	NZ_LR134403	Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence	214611-214646	1	0.972
NZ_CP013722_2	2.7\|997127\|36\|NZ_CP013722\|PILER-CR,CRISPRCasFinder	997127-997162	36	MT500540	Listeria phage LP-HM00113468, complete genome	39833-39868	1	0.972
NZ_CP013722_2	2.7\|997127\|36\|NZ_CP013722\|PILER-CR,CRISPRCasFinder	997127-997162	36	KJ094023	Listeria phage LP-101, complete genome	5084-5119	1	0.972
NZ_CP013722_2	2.9\|996807\|36\|NZ_CP013722\|CRT	996807-996842	36	NZ_LR134403	Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence	213463-213498	1	0.972
NZ_CP013722_2	2.10\|996872\|35\|NZ_CP013722\|CRT	996872-996906	35	NC_021539	Listeria phage LP-030-2, complete genome	18926-18960	1	0.971
NZ_CP013722_2	2.10\|996872\|35\|NZ_CP013722\|CRT	996872-996906	35	KJ094023	Listeria phage LP-101, complete genome	22882-22916	1	0.971
NZ_CP013722_2	2.12\|996999\|35\|NZ_CP013722\|CRT	996999-997033	35	MH341453	Listeria phage PSU-VKH-LP041, complete genome	10139-10173	1	0.971
NZ_CP013722_4	4.6\|1793524\|30\|NZ_CP013722\|CRISPRCasFinder,CRT	1793524-1793553	30	KJ094027	Listeria phage LP-083-1 contig 1, partial genome	5491-5520	1	0.967
NZ_CP013722_4	4.6\|1793524\|30\|NZ_CP013722\|CRISPRCasFinder,CRT	1793524-1793553	30	DQ003641	Listeria phage P35, complete genome	5244-5273	1	0.967
NZ_CP013722_4	4.11\|1793854\|30\|NZ_CP013722\|CRISPRCasFinder,CRT	1793854-1793883	30	MH341452	Listeria phage PSU-VKH-LP040, complete genome	8565-8594	1	0.967
NZ_CP013722_4	4.11\|1793854\|30\|NZ_CP013722\|CRISPRCasFinder,CRT	1793854-1793883	30	DQ003637	Listeria phage A500, complete genome	8532-8561	1	0.967
NZ_CP013722_4	4.12\|1793920\|30\|NZ_CP013722\|CRISPRCasFinder,CRT	1793920-1793949	30	MH341453	Listeria phage PSU-VKH-LP041, complete genome	42297-42326	1	0.967
NZ_CP013722_1	1.3\|976292\|37\|NZ_CP013722\|CRISPRCasFinder,CRT,PILER-CR	976292-976328	37	MN689509	Lactococcus phage CHPC1175, complete genome	29544-29580	2	0.946
NZ_CP013722_1	1.3\|976292\|37\|NZ_CP013722\|CRISPRCasFinder,CRT,PILER-CR	976292-976328	37	MK448735	Streptococcus phage Javan349, complete genome	11483-11519	2	0.946
NZ_CP013722_1	1.10\|976746\|37\|NZ_CP013722\|CRISPRCasFinder,CRT,PILER-CR	976746-976782	37	MH341452	Listeria phage PSU-VKH-LP040, complete genome	201-237	2	0.946
NZ_CP013722_1	1.11\|976812\|36\|NZ_CP013722\|CRISPRCasFinder,CRT,PILER-CR	976812-976847	36	KP399677	Listeria phage vB_LmoS_188, complete genome	31581-31616	2	0.944
NZ_CP013722_1	1.11\|976812\|36\|NZ_CP013722\|CRISPRCasFinder,CRT,PILER-CR	976812-976847	36	KP399678	Listeria phage vB_LmoS_293, complete genome	32818-32853	2	0.944
NZ_CP013722_1	1.24\|977657\|36\|NZ_CP013722\|CRISPRCasFinder,CRT,PILER-CR	977657-977692	36	KP399678	Listeria phage vB_LmoS_293, complete genome	1049-1084	2	0.944
NZ_CP013722_1	1.26\|977787\|36\|NZ_CP013722\|CRISPRCasFinder,CRT,PILER-CR	977787-977822	36	KJ094022	Listeria phage LP-030-3, complete genome	38302-38337	2	0.944
NZ_CP013722_1	1.31\|978109\|36\|NZ_CP013722\|CRISPRCasFinder,CRT,PILER-CR	978109-978144	36	MH341453	Listeria phage PSU-VKH-LP041, complete genome	26132-26167	2	0.944
NZ_CP013722_1	1.42\|978823\|37\|NZ_CP013722\|CRISPRCasFinder,CRT,PILER-CR	978823-978859	37	MH299806	Listeria phage LP-KV022, complete genome	50025-50061	2	0.946
NZ_CP013722_1	1.42\|978823\|37\|NZ_CP013722\|CRISPRCasFinder,CRT,PILER-CR	978823-978859	37	MN114083	Listeria phage LP-013, complete genome	45546-45582	2	0.946
NZ_CP013722_1	1.42\|978823\|37\|NZ_CP013722\|CRISPRCasFinder,CRT,PILER-CR	978823-978859	37	NC_021785	Listeria phage LP-110, complete genome	7743-7779	2	0.946
NZ_CP013722_1	1.42\|978823\|37\|NZ_CP013722\|CRISPRCasFinder,CRT,PILER-CR	978823-978859	37	MN128593	Listeria phage LP-031, complete genome	44841-44877	2	0.946
NZ_CP013722_1	1.42\|978823\|37\|NZ_CP013722\|CRISPRCasFinder,CRT,PILER-CR	978823-978859	37	NC_021787	Listeria phage LP-037, complete genome	2209-2245	2	0.946
NZ_CP013722_1	1.42\|978823\|37\|NZ_CP013722\|CRISPRCasFinder,CRT,PILER-CR	978823-978859	37	MN904502	Listeria phage LP-018, complete genome	45000-45036	2	0.946
NZ_CP013722_1	1.42\|978823\|37\|NZ_CP013722\|CRISPRCasFinder,CRT,PILER-CR	978823-978859	37	JX442241	Listeria phage P70, complete genome	51460-51496	2	0.946
NZ_CP013722_1	1.42\|978823\|37\|NZ_CP013722\|CRISPRCasFinder,CRT,PILER-CR	978823-978859	37	KJ094021	Listeria phage LP-114, complete genome	35282-35318	2	0.946
NZ_CP013722_1	1.42\|978823\|37\|NZ_CP013722\|CRISPRCasFinder,CRT,PILER-CR	978823-978859	37	MN114082	Listeria phage LP-010, complete genome	44831-44867	2	0.946
NZ_CP013722_1	1.43\|978889\|36\|NZ_CP013722\|CRISPRCasFinder,CRT,PILER-CR	978889-978924	36	KJ094021	Listeria phage LP-114, complete genome	37782-37817	2	0.944
NZ_CP013722_2	2.2\|996806\|37\|NZ_CP013722\|PILER-CR,CRISPRCasFinder	996806-996842	37	NZ_LR134403	Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence	213463-213499	2	0.946
NZ_CP013722_2	2.3\|996871\|36\|NZ_CP013722\|PILER-CR,CRISPRCasFinder	996871-996906	36	NC_009812	Listeria phage B025, complete genome	23381-23416	2	0.944
NZ_CP013722_2	2.5\|996998\|36\|NZ_CP013722\|PILER-CR,CRISPRCasFinder	996998-997033	36	NC_009813	Listeria phage B054, complete genome	10139-10174	2	0.944
NZ_CP013722_2	2.10\|996872\|35\|NZ_CP013722\|CRT	996872-996906	35	NC_009812	Listeria phage B025, complete genome	23381-23415	2	0.943
NZ_CP013722_2	2.12\|996999\|35\|NZ_CP013722\|CRT	996999-997033	35	NC_009813	Listeria phage B054, complete genome	10139-10173	2	0.943
NZ_CP013722_2	2.14\|997128\|35\|NZ_CP013722\|CRT	997128-997162	35	NC_009812	Listeria phage B025, complete genome	5044-5078	2	0.943
NZ_CP013722_4	4.9\|1793722\|30\|NZ_CP013722\|CRISPRCasFinder,CRT	1793722-1793751	30	MH299806	Listeria phage LP-KV022, complete genome	50960-50989	2	0.933
NZ_CP013722_4	4.9\|1793722\|30\|NZ_CP013722\|CRISPRCasFinder,CRT	1793722-1793751	30	JB137888	Sequence 7 from Patent WO2012159774	2358-2387	2	0.933
NZ_CP013722_4	4.9\|1793722\|30\|NZ_CP013722\|CRISPRCasFinder,CRT	1793722-1793751	30	MN114083	Listeria phage LP-013, complete genome	46481-46510	2	0.933
NZ_CP013722_4	4.9\|1793722\|30\|NZ_CP013722\|CRISPRCasFinder,CRT	1793722-1793751	30	NC_021785	Listeria phage LP-110, complete genome	8678-8707	2	0.933
NZ_CP013722_4	4.9\|1793722\|30\|NZ_CP013722\|CRISPRCasFinder,CRT	1793722-1793751	30	MN904502	Listeria phage LP-018, complete genome	45935-45964	2	0.933
NZ_CP013722_4	4.9\|1793722\|30\|NZ_CP013722\|CRISPRCasFinder,CRT	1793722-1793751	30	MN114082	Listeria phage LP-010, complete genome	45766-45795	2	0.933
NZ_CP013722_4	4.11\|1793854\|30\|NZ_CP013722\|CRISPRCasFinder,CRT	1793854-1793883	30	KJ094022	Listeria phage LP-030-3, complete genome	16946-16975	2	0.933
NZ_CP013722_4	4.11\|1793854\|30\|NZ_CP013722\|CRISPRCasFinder,CRT	1793854-1793883	30	KP399678	Listeria phage vB_LmoS_293, complete genome	8553-8582	2	0.933
NZ_CP013722_4	4.16\|1794184\|30\|NZ_CP013722\|CRISPRCasFinder,CRT,PILER-CR	1794184-1794213	30	MT500540	Listeria phage LP-HM00113468, complete genome	39200-39229	2	0.933
NZ_CP013722_4	4.16\|1794184\|30\|NZ_CP013722\|CRISPRCasFinder,CRT,PILER-CR	1794184-1794213	30	NC_009812	Listeria phage B025, complete genome	5683-5712	2	0.933
NZ_CP013722_1	1.25\|977722\|36\|NZ_CP013722\|CRISPRCasFinder,CRT,PILER-CR	977722-977757	36	MH341453	Listeria phage PSU-VKH-LP041, complete genome	41996-42031	3	0.917
NZ_CP013722_1	1.42\|978823\|37\|NZ_CP013722\|CRISPRCasFinder,CRT,PILER-CR	978823-978859	37	JB137888	Sequence 7 from Patent WO2012159774	3286-3322	3	0.919
NZ_CP013722_2	2.7\|997127\|36\|NZ_CP013722\|PILER-CR,CRISPRCasFinder	997127-997162	36	NC_009812	Listeria phage B025, complete genome	5044-5079	3	0.917
NZ_CP013722_4	4.9\|1793722\|30\|NZ_CP013722\|CRISPRCasFinder,CRT	1793722-1793751	30	KJ094026	Listeria phage LP-032 contig 3, partial genome	11878-11907	3	0.9
NZ_CP013722_4	4.9\|1793722\|30\|NZ_CP013722\|CRISPRCasFinder,CRT	1793722-1793751	30	MN128593	Listeria phage LP-031, complete genome	45776-45805	3	0.9
NZ_CP013722_4	4.9\|1793722\|30\|NZ_CP013722\|CRISPRCasFinder,CRT	1793722-1793751	30	NC_021787	Listeria phage LP-037, complete genome	3144-3173	3	0.9
NZ_CP013722_4	4.9\|1793722\|30\|NZ_CP013722\|CRISPRCasFinder,CRT	1793722-1793751	30	JX442241	Listeria phage P70, complete genome	52395-52424	3	0.9
NZ_CP013722_4	4.9\|1793722\|30\|NZ_CP013722\|CRISPRCasFinder,CRT	1793722-1793751	30	KJ094020	Listeria phage LP-026, complete genome	29295-29324	3	0.9
NZ_CP013722_4	4.9\|1793722\|30\|NZ_CP013722\|CRISPRCasFinder,CRT	1793722-1793751	30	KJ094021	Listeria phage LP-114, complete genome	36486-36515	3	0.9
NZ_CP013722_1	1.20\|977397\|36\|NZ_CP013722\|CRISPRCasFinder,CRT,PILER-CR	977397-977432	36	FW590615	JP 2010534058-A/25: ANTIBIOTIC RESISTANCE FREE LISTERIA STRAINS AND METHODS FOR CONSTRUCTING AND USING SAME	3844-3879	4	0.889
NZ_CP013722_1	1.20\|977397\|36\|NZ_CP013722\|CRISPRCasFinder,CRT,PILER-CR	977397-977432	36	HI504184	Sequence 26 from Patent EP2147092	3844-3879	4	0.889
NZ_CP013722_1	1.20\|977397\|36\|NZ_CP013722\|CRISPRCasFinder,CRT,PILER-CR	977397-977432	36	AJ417489	bacteriophage U153 int gene for U153 integrase	3844-3879	4	0.889
NZ_CP013722_1	1.25\|977722\|36\|NZ_CP013722\|CRISPRCasFinder,CRT,PILER-CR	977722-977757	36	KJ094023	Listeria phage LP-101, complete genome	32760-32795	5	0.861
NZ_CP013722_2	2.9\|996807\|36\|NZ_CP013722\|CRT	996807-996842	36	JN700520	Staphylococcus phage StB12, complete genome	6832-6867	5	0.861
NZ_CP013722_4	4.21\|1794515\|30\|NZ_CP013722\|CRISPRCasFinder,CRT	1794515-1794544	30	MK448753	Streptococcus phage Javan407, complete genome	11088-11117	5	0.833
NZ_CP013722_1	1.2\|976228\|35\|NZ_CP013722\|CRISPRCasFinder,CRT,PILER-CR	976228-976262	35	MN694189	Marine virus AFVG_250M578, complete genome	47879-47913	6	0.829
NZ_CP013722_1	1.27\|977852\|34\|NZ_CP013722\|CRISPRCasFinder,CRT,PILER-CR	977852-977885	34	NC_022111	Prevotella sp. oral taxon 299 str. F0039 plasmid, complete sequence	1764851-1764884	6	0.824
NZ_CP013722_2	2.2\|996806\|37\|NZ_CP013722\|PILER-CR,CRISPRCasFinder	996806-996842	37	JN700520	Staphylococcus phage StB12, complete genome	6832-6868	6	0.838
NZ_CP013722_4	4.4\|1793392\|30\|NZ_CP013722\|CRISPRCasFinder,CRT	1793392-1793421	30	NC_020843	Vibrio phage 11895-B1 genomic sequence	77730-77759	6	0.8
NZ_CP013722_4	4.4\|1793392\|30\|NZ_CP013722\|CRISPRCasFinder,CRT	1793392-1793421	30	FJ008913	Bacteroides phage B40-8 culture-collection ATCC:51477-B1, complete genome	29329-29358	7	0.767
NZ_CP013722_4	4.4\|1793392\|30\|NZ_CP013722\|CRISPRCasFinder,CRT	1793392-1793421	30	NC_011222	Bacteroides phage B40-8, complete genome	29329-29358	7	0.767
NZ_CP013722_4	4.4\|1793392\|30\|NZ_CP013722\|CRISPRCasFinder,CRT	1793392-1793421	30	NZ_CP041069	Bacillus megaterium strain KNU-01 plasmid pKNU_01_5, complete sequence	40539-40568	7	0.767
NZ_CP013722_4	4.4\|1793392\|30\|NZ_CP013722\|CRISPRCasFinder,CRT	1793392-1793421	30	KP282679	Sulfolobales virus YNP1 strain SYV1, complete genome	33735-33764	7	0.767
NZ_CP013722_4	4.14\|1794052\|30\|NZ_CP013722\|CRISPRCasFinder,CRT,PILER-CR	1794052-1794081	30	MN961670	Pseudomonas putida strain 420352 plasmid p420352-IMP, complete sequence	260427-260456	7	0.767
NZ_CP013722_4	4.21\|1794515\|30\|NZ_CP013722\|CRISPRCasFinder,CRT	1794515-1794544	30	NZ_CP022418	Sulfitobacter pseudonitzschiae strain SMR1 plasmid pSMR1-3, complete sequence	229518-229547	7	0.767
NZ_CP013722_4	4.21\|1794515\|30\|NZ_CP013722\|CRISPRCasFinder,CRT	1794515-1794544	30	JQ807245	Environmental Halophage eHP-25, partial genome	12883-12912	7	0.767
NZ_CP013722_1	1.15\|977073\|34\|NZ_CP013722\|CRISPRCasFinder,CRT,PILER-CR	977073-977106	34	KT070867	Bacillus phage PBC2, complete genome	75389-75422	8	0.765
NZ_CP013722_1	1.20\|977397\|36\|NZ_CP013722\|CRISPRCasFinder,CRT,PILER-CR	977397-977432	36	NC_019743	Microcoleus sp. PCC 7113 plasmid pMIC7113.08, complete sequence	4997-5032	8	0.778
NZ_CP013722_2	2.9\|996807\|36\|NZ_CP013722\|CRT	996807-996842	36	MW084976	Bacillus phage Kirov, complete genome	27565-27600	8	0.778
NZ_CP013722_4	4.1\|1793194\|30\|NZ_CP013722\|CRISPRCasFinder,CRT	1793194-1793223	30	NZ_CP041669	Legionella israelensis strain L18-01051 plasmid unnamed, complete sequence	44761-44790	8	0.733
NZ_CP013722_4	4.4\|1793392\|30\|NZ_CP013722\|CRISPRCasFinder,CRT	1793392-1793421	30	NZ_CP024317	Borrelia miyamotoi strain Yekat-6 plasmid pYkt6-lp72, complete sequence	66710-66739	8	0.733
NZ_CP013722_4	4.4\|1793392\|30\|NZ_CP013722\|CRISPRCasFinder,CRT	1793392-1793421	30	NZ_CP024391	Borrelia miyamotoi strain Izh-4 plasmid pIzh4-lp72, complete sequence	6811-6840	8	0.733
NZ_CP013722_4	4.4\|1793392\|30\|NZ_CP013722\|CRISPRCasFinder,CRT	1793392-1793421	30	NZ_CP024206	Borrelia miyamotoi strain Izh-5 plasmid pIzh5-lp72, complete sequence	66716-66745	8	0.733
NZ_CP013722_4	4.4\|1793392\|30\|NZ_CP013722\|CRISPRCasFinder,CRT	1793392-1793421	30	NZ_CP024334	Borrelia miyamotoi strain Yekat-1 plasmid pYkt1-lp72, complete sequence	6823-6852	8	0.733
NZ_CP013722_4	4.4\|1793392\|30\|NZ_CP013722\|CRISPRCasFinder,CRT	1793392-1793421	30	NZ_CP024352	Borrelia miyamotoi strain Izh-16 plasmid pIzh16-lp72, complete sequence	66726-66755	8	0.733
NZ_CP013722_4	4.4\|1793392\|30\|NZ_CP013722\|CRISPRCasFinder,CRT	1793392-1793421	30	NZ_CP024372	Borrelia miyamotoi strain Izh-14 plasmid pIzh14-lp72, complete sequence	66704-66733	8	0.733
NZ_CP013722_4	4.7\|1793590\|30\|NZ_CP013722\|CRISPRCasFinder,CRT	1793590-1793619	30	NZ_CP014236	Moraxella osloensis strain CCUG 350 plasmid unnamed3, complete sequence	16314-16343	8	0.733
NZ_CP013722_4	4.16\|1794184\|30\|NZ_CP013722\|CRISPRCasFinder,CRT,PILER-CR	1794184-1794213	30	NC_007962	Campylobacter lari plasmid pUPTC237 DNA, complete sequence	3449-3478	8	0.733
NZ_CP013722_4	4.17\|1794250\|30\|NZ_CP013722\|CRISPRCasFinder,CRT,PILER-CR	1794250-1794279	30	NC_008012	Lawsonia intracellularis PHE/MN1-00 plasmid 1, complete sequence	24742-24771	8	0.733
NZ_CP013722_4	4.17\|1794250\|30\|NZ_CP013722\|CRISPRCasFinder,CRT,PILER-CR	1794250-1794279	30	NC_020128	Lawsonia intracellularis N343 plasmid 1, complete sequence	24789-24818	8	0.733
NZ_CP013722_4	4.18\|1794316\|30\|NZ_CP013722\|CRISPRCasFinder,CRT,PILER-CR	1794316-1794345	30	MH316570	Mycobacterium phage Silvafighter, complete genome	36244-36273	8	0.733
NZ_CP013722_4	4.18\|1794316\|30\|NZ_CP013722\|CRISPRCasFinder,CRT,PILER-CR	1794316-1794345	30	KU935729	Mycobacterium phage SkinnyPete, complete genome	36958-36987	8	0.733
NZ_CP013722_4	4.18\|1794316\|30\|NZ_CP013722\|CRISPRCasFinder,CRT,PILER-CR	1794316-1794345	30	MK494120	Mycobacterium phage Piper2020, complete genome	49284-49313	8	0.733
NZ_CP013722_4	4.18\|1794316\|30\|NZ_CP013722\|CRISPRCasFinder,CRT,PILER-CR	1794316-1794345	30	MN693847	Marine virus AFVG_250M940, complete genome	12749-12778	8	0.733
NZ_CP013722_4	4.18\|1794316\|30\|NZ_CP013722\|CRISPRCasFinder,CRT,PILER-CR	1794316-1794345	30	MN694252	Marine virus AFVG_250M939, complete genome	25582-25611	8	0.733
NZ_CP013722_4	4.18\|1794316\|30\|NZ_CP013722\|CRISPRCasFinder,CRT,PILER-CR	1794316-1794345	30	MN693737	Marine virus AFVG_250M938, complete genome	25634-25663	8	0.733
NZ_CP013722_4	4.21\|1794515\|30\|NZ_CP013722\|CRISPRCasFinder,CRT	1794515-1794544	30	NZ_CP044099	Citrobacter portucalensis strain FDAARGOS_617 plasmid unnamed1	725-754	8	0.733
NZ_CP013722_4	4.21\|1794515\|30\|NZ_CP013722\|CRISPRCasFinder,CRT	1794515-1794544	30	AP013457	Uncultured Mediterranean phage uvMED DNA, complete genome, group G17, isolate: uvMED-CGR-U-MedDCM-OCT-S28-C20	34712-34741	8	0.733
NZ_CP013722_1	1.2\|976228\|35\|NZ_CP013722\|CRISPRCasFinder,CRT,PILER-CR	976228-976262	35	MK448625	Streptococcus satellite phage Javan738, complete genome	5960-5994	9	0.743
NZ_CP013722_1	1.2\|976228\|35\|NZ_CP013722\|CRISPRCasFinder,CRT,PILER-CR	976228-976262	35	MK448449	Streptococcus satellite phage Javan356, complete genome	4490-4524	9	0.743
NZ_CP013722_1	1.2\|976228\|35\|NZ_CP013722\|CRISPRCasFinder,CRT,PILER-CR	976228-976262	35	MK448636	Streptococcus satellite phage Javan749, complete genome	6112-6146	9	0.743
NZ_CP013722_1	1.2\|976228\|35\|NZ_CP013722\|CRISPRCasFinder,CRT,PILER-CR	976228-976262	35	NZ_CP045037	Lactobacillus mali strain LM596 plasmid unnamed2, complete sequence	34734-34768	9	0.743
NZ_CP013722_1	1.2\|976228\|35\|NZ_CP013722\|CRISPRCasFinder,CRT,PILER-CR	976228-976262	35	NZ_CP018177	Lactobacillus hordei strain TMW 1.1822 plasmid pL11822-1, complete sequence	11325-11359	9	0.743
NZ_CP013722_1	1.2\|976228\|35\|NZ_CP013722\|CRISPRCasFinder,CRT,PILER-CR	976228-976262	35	NZ_CP018181	Lactobacillus nagelii strain TMW 1.1827 plasmid pL11827-1, complete sequence	63608-63642	9	0.743
NZ_CP013722_1	1.23\|977593\|35\|NZ_CP013722\|CRISPRCasFinder,CRT,PILER-CR	977593-977627	35	NC_014533	Gloeothece verrucosa PCC 7822 plasmid Cy782201, complete sequence	491525-491559	9	0.743
NZ_CP013722_1	1.27\|977852\|34\|NZ_CP013722\|CRISPRCasFinder,CRT,PILER-CR	977852-977885	34	NZ_CP038863	Campylobacter jejuni strain SCJK2 plasmid unnamed1, complete sequence	39302-39335	9	0.735
NZ_CP013722_2	2.2\|996806\|37\|NZ_CP013722\|PILER-CR,CRISPRCasFinder	996806-996842	37	MW084976	Bacillus phage Kirov, complete genome	27565-27601	9	0.757
NZ_CP013722_4	4.3\|1793326\|30\|NZ_CP013722\|CRISPRCasFinder,CRT	1793326-1793355	30	NC_021793	Cellulophaga phage phi48:2, complete genome	1953-1982	9	0.7
NZ_CP013722_4	4.4\|1793392\|30\|NZ_CP013722\|CRISPRCasFinder,CRT	1793392-1793421	30	NZ_CP039931	Acinetobacter baumannii strain TG29392 plasmid pTG29392_1, complete sequence	84105-84134	9	0.7
NZ_CP013722_4	4.4\|1793392\|30\|NZ_CP013722\|CRISPRCasFinder,CRT	1793392-1793421	30	MT774393	CrAssphage cr127_1, complete genome	14942-14971	9	0.7
NZ_CP013722_4	4.13\|1793986\|30\|NZ_CP013722\|CRISPRCasFinder,CRT	1793986-1794015	30	NC_004961	Vibrio sp. 41 cryptic plasmid pPS41, complete sequence	1695-1724	9	0.7
NZ_CP013722_4	4.4\|1793392\|30\|NZ_CP013722\|CRISPRCasFinder,CRT	1793392-1793421	30	NC_021623	Borrelia hermsii strain HS1 plasmid lp174, complete sequence	171143-171172	10	0.667
NZ_CP013722_4	4.4\|1793392\|30\|NZ_CP013722\|CRISPRCasFinder,CRT	1793392-1793421	30	NZ_CP014350	Borrelia hermsii HS1 isolate Browne Mountain plasmid megaplasmid, complete sequence	180326-180355	10	0.667
NZ_CP013722_1	1.7\|976554\|34\|NZ_CP013722\|CRISPRCasFinder,CRT,PILER-CR	976554-976587	34	NZ_CP034816	Paracoccus sp. Arc7-R13 plasmid unnamed6, complete sequence	26153-26186	11	0.676
NZ_CP013722_2	2.8\|996743\|35\|NZ_CP013722\|CRT	996743-996777	35	NZ_CP029455	Bacillus cereus strain FORC087 plasmid pFORC087.1, complete sequence	130632-130666	11	0.686
NZ_CP013722_2	2.8\|996743\|35\|NZ_CP013722\|CRT	996743-996777	35	NZ_CP015592	Bacillus cereus strain AR156 plasmid pAR460, complete sequence	17622-17656	11	0.686
NZ_CP013722_2	2.8\|996743\|35\|NZ_CP013722\|CRT	996743-996777	35	NZ_CP009368	Bacillus cereus strain FM1 plasmid unnamed, complete sequence	31860-31894	11	0.686
NZ_CP013722_2	2.8\|996743\|35\|NZ_CP013722\|CRT	996743-996777	35	NZ_CP009336	Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence	338888-338922	11	0.686
NZ_CP013722_1	1.15\|977073\|34\|NZ_CP013722\|CRISPRCasFinder,CRT,PILER-CR	977073-977106	34	NC_031922	Synechococcus phage S-CAM9 isolate 1109NB16, complete genome	146996-147029	12	0.647
NZ_CP013722_1	1.15\|977073\|34\|NZ_CP013722\|CRISPRCasFinder,CRT,PILER-CR	977073-977106	34	KU686204	Synechococcus phage S-CAM9 isolate 0808SB05, complete genome	146978-147011	12	0.647
NZ_CP013722_1	1.15\|977073\|34\|NZ_CP013722\|CRISPRCasFinder,CRT,PILER-CR	977073-977106	34	KU686205	Synechococcus phage S-CAM9 isolate 0908SB82, complete genome	146825-146858	12	0.647

1. spacer 1.11|976812|36|NZ_CP013722|CRISPRCasFinder,CRT,PILER-CR matches to MH341452 (Listeria phage PSU-VKH-LP040, complete genome) position: , mismatch: 0, identity: 1.0

cgctgtaattgacttaatacttgtgacgaattcacc	CRISPR spacer
cgctgtaattgacttaatacttgtgacgaattcacc	Protospacer
************************************

2. spacer 1.30|978044|36|NZ_CP013722|CRISPRCasFinder,CRT,PILER-CR matches to NC_003216 (Listeria phage A118, complete genome) position: , mismatch: 0, identity: 1.0

attgaggtgtattactgtcgccagttgagtaaccag	CRISPR spacer
attgaggtgtattactgtcgccagttgagtaaccag	Protospacer
************************************

3. spacer 1.30|978044|36|NZ_CP013722|CRISPRCasFinder,CRT,PILER-CR matches to AJ242593 (Bacteriophage A118 complete genome) position: , mismatch: 0, identity: 1.0

attgaggtgtattactgtcgccagttgagtaaccag	CRISPR spacer
attgaggtgtattactgtcgccagttgagtaaccag	Protospacer
************************************

4. spacer 2.8|996743|35|NZ_CP013722|CRT matches to DQ003642 (Listeria phage A006, complete genome) position: , mismatch: 0, identity: 1.0

gaaattgtaaaatctatatccgttgattcaacaaa	CRISPR spacer
gaaattgtaaaatctatatccgttgattcaacaaa	Protospacer
***********************************

5. spacer 2.9|996807|36|NZ_CP013722|CRT matches to MT500540 (Listeria phage LP-HM00113468, complete genome) position: , mismatch: 0, identity: 1.0

ttaatttgatagtcataatttatttcctcctatttt	CRISPR spacer
ttaatttgatagtcataatttatttcctcctatttt	Protospacer
************************************

6. spacer 2.9|996807|36|NZ_CP013722|CRT matches to NC_009812 (Listeria phage B025, complete genome) position: , mismatch: 0, identity: 1.0

ttaatttgatagtcataatttatttcctcctatttt	CRISPR spacer
ttaatttgatagtcataatttatttcctcctatttt	Protospacer
************************************

7. spacer 2.9|996807|36|NZ_CP013722|CRT matches to KJ094023 (Listeria phage LP-101, complete genome) position: , mismatch: 0, identity: 1.0

ttaatttgatagtcataatttatttcctcctatttt	CRISPR spacer
ttaatttgatagtcataatttatttcctcctatttt	Protospacer
************************************

8. spacer 2.14|997128|35|NZ_CP013722|CRT matches to NZ_LR134403 (Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence) position: , mismatch: 0, identity: 1.0

gccatttacaatcacccttccggagtttgatctgt	CRISPR spacer
gccatttacaatcacccttccggagtttgatctgt	Protospacer
***********************************

9. spacer 2.14|997128|35|NZ_CP013722|CRT matches to MT500540 (Listeria phage LP-HM00113468, complete genome) position: , mismatch: 0, identity: 1.0

gccatttacaatcacccttccggagtttgatctgt	CRISPR spacer
gccatttacaatcacccttccggagtttgatctgt	Protospacer
***********************************

10. spacer 2.14|997128|35|NZ_CP013722|CRT matches to KJ094023 (Listeria phage LP-101, complete genome) position: , mismatch: 0, identity: 1.0

gccatttacaatcacccttccggagtttgatctgt	CRISPR spacer
gccatttacaatcacccttccggagtttgatctgt	Protospacer
***********************************

11. spacer 4.2|1793260|30|NZ_CP013722|CRISPRCasFinder,CRT matches to KJ094022 (Listeria phage LP-030-3, complete genome) position: , mismatch: 0, identity: 1.0

tagtaacaccagaggtttttaatgcgtaca	CRISPR spacer
tagtaacaccagaggtttttaatgcgtaca	Protospacer
******************************

12. spacer 4.5|1793458|30|NZ_CP013722|CRISPRCasFinder,CRT matches to DQ003637 (Listeria phage A500, complete genome) position: , mismatch: 0, identity: 1.0

aatatttagaggaattagagcgtactaatg	CRISPR spacer
aatatttagaggaattagagcgtactaatg	Protospacer
******************************

13. spacer 4.5|1793458|30|NZ_CP013722|CRISPRCasFinder,CRT matches to KJ094022 (Listeria phage LP-030-3, complete genome) position: , mismatch: 0, identity: 1.0

aatatttagaggaattagagcgtactaatg	CRISPR spacer
aatatttagaggaattagagcgtactaatg	Protospacer
******************************

14. spacer 4.11|1793854|30|NZ_CP013722|CRISPRCasFinder,CRT matches to NC_003216 (Listeria phage A118, complete genome) position: , mismatch: 0, identity: 1.0

acttggcacggaactgtttagagtcggttt	CRISPR spacer
acttggcacggaactgtttagagtcggttt	Protospacer
******************************

15. spacer 4.11|1793854|30|NZ_CP013722|CRISPRCasFinder,CRT matches to AJ242593 (Bacteriophage A118 complete genome) position: , mismatch: 0, identity: 1.0

acttggcacggaactgtttagagtcggttt	CRISPR spacer
acttggcacggaactgtttagagtcggttt	Protospacer
******************************

16. spacer 4.14|1794052|30|NZ_CP013722|CRISPRCasFinder,CRT,PILER-CR matches to NC_003216 (Listeria phage A118, complete genome) position: , mismatch: 0, identity: 1.0

atcccatttttcaacataataggtagcaac	CRISPR spacer
atcccatttttcaacataataggtagcaac	Protospacer
******************************

17. spacer 4.14|1794052|30|NZ_CP013722|CRISPRCasFinder,CRT,PILER-CR matches to AJ242593 (Bacteriophage A118 complete genome) position: , mismatch: 0, identity: 1.0

atcccatttttcaacataataggtagcaac	CRISPR spacer
atcccatttttcaacataataggtagcaac	Protospacer
******************************

18. spacer 4.16|1794184|30|NZ_CP013722|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR134403 (Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence) position: , mismatch: 0, identity: 1.0

accatccatgaaagatttagaaattttaca	CRISPR spacer
accatccatgaaagatttagaaattttaca	Protospacer
******************************

19. spacer 4.16|1794184|30|NZ_CP013722|CRISPRCasFinder,CRT,PILER-CR matches to KJ094023 (Listeria phage LP-101, complete genome) position: , mismatch: 0, identity: 1.0

accatccatgaaagatttagaaattttaca	CRISPR spacer
accatccatgaaagatttagaaattttaca	Protospacer
******************************

20. spacer 4.19|1794382|31|NZ_CP013722|CRISPRCasFinder,CRT,PILER-CR matches to MH341453 (Listeria phage PSU-VKH-LP041, complete genome) position: , mismatch: 0, identity: 1.0

aaagtaccgcagtaaataagcctgacttctc	CRISPR spacer
aaagtaccgcagtaaataagcctgacttctc	Protospacer
*******************************

21. spacer 4.19|1794382|31|NZ_CP013722|CRISPRCasFinder,CRT,PILER-CR matches to NC_009813 (Listeria phage B054, complete genome) position: , mismatch: 0, identity: 1.0

aaagtaccgcagtaaataagcctgacttctc	CRISPR spacer
aaagtaccgcagtaaataagcctgacttctc	Protospacer
*******************************

22. spacer 1.3|976292|37|NZ_CP013722|CRISPRCasFinder,CRT,PILER-CR matches to KY705255 (Streptococcus phage P0095, complete genome) position: , mismatch: 1, identity: 0.973

taagatgtccgataatgaacacgcgttctctgttttg	CRISPR spacer
taagatgtccgataatgaacactcgttctctgttttg	Protospacer
********************** **************

23. spacer 1.3|976292|37|NZ_CP013722|CRISPRCasFinder,CRT,PILER-CR matches to KY705251 (Streptococcus phage P0091, complete genome) position: , mismatch: 1, identity: 0.973

taagatgtccgataatgaacacgcgttctctgttttg	CRISPR spacer
taagatgtccgataatgaacactcgttctctgttttg	Protospacer
********************** **************

24. spacer 1.3|976292|37|NZ_CP013722|CRISPRCasFinder,CRT,PILER-CR matches to KX879643 (Streptococcus phage CHPC1151, complete genome) position: , mismatch: 1, identity: 0.973

taagatgtccgataatgaacacgcgttctctgttttg	CRISPR spacer
taagatgtccgataatgaacactcgttctctgttttg	Protospacer
********************** **************

25. spacer 1.3|976292|37|NZ_CP013722|CRISPRCasFinder,CRT,PILER-CR matches to MK202161 (Streptococcus phage CHPC1282, complete genome) position: , mismatch: 1, identity: 0.973

taagatgtccgataatgaacacgcgttctctgttttg	CRISPR spacer
taagatgtccgataatgaacactcgttctctgttttg	Protospacer
********************** **************

26. spacer 1.3|976292|37|NZ_CP013722|CRISPRCasFinder,CRT,PILER-CR matches to KY705252 (Streptococcus phage P0092, complete genome) position: , mismatch: 1, identity: 0.973

taagatgtccgataatgaacacgcgttctctgttttg	CRISPR spacer
taagatgtccgataatgaacactcgttctctgttttg	Protospacer
********************** **************

27. spacer 1.3|976292|37|NZ_CP013722|CRISPRCasFinder,CRT,PILER-CR matches to MH937506 (Streptococcus phage CHPC1148, complete genome) position: , mismatch: 1, identity: 0.973

taagatgtccgataatgaacacgcgttctctgttttg	CRISPR spacer
taagatgtccgataatgaacactcgttctctgttttg	Protospacer
********************** **************

28. spacer 1.3|976292|37|NZ_CP013722|CRISPRCasFinder,CRT,PILER-CR matches to KY705253 (Streptococcus phage P0093, complete genome) position: , mismatch: 1, identity: 0.973

taagatgtccgataatgaacacgcgttctctgttttg	CRISPR spacer
taagatgtccgataatgaacactcgttctctgttttg	Protospacer
********************** **************

29. spacer 1.3|976292|37|NZ_CP013722|CRISPRCasFinder,CRT,PILER-CR matches to KY705254 (Streptococcus phage P0094, complete genome) position: , mismatch: 1, identity: 0.973

taagatgtccgataatgaacacgcgttctctgttttg	CRISPR spacer
taagatgtccgataatgaacactcgttctctgttttg	Protospacer
********************** **************

30. spacer 1.6|976489|36|NZ_CP013722|CRISPRCasFinder,CRT,PILER-CR matches to NC_021539 (Listeria phage LP-030-2, complete genome) position: , mismatch: 1, identity: 0.972

atatttgaccgtgcccggtaaaactaccgcaaacgt	CRISPR spacer
atatttgaccgtgcccggtaaaactaccgcgaacgt	Protospacer
******************************.*****

31. spacer 1.6|976489|36|NZ_CP013722|CRISPRCasFinder,CRT,PILER-CR matches to AJ312240 (Bacteriophage PSA complete genome) position: , mismatch: 1, identity: 0.972

atatttgaccgtgcccggtaaaactaccgcaaacgt	CRISPR spacer
atatttgaccgtgcccggtaaaactaccgcgaacgt	Protospacer
******************************.*****

32. spacer 1.8|976617|35|NZ_CP013722|CRISPRCasFinder,CRT,PILER-CR matches to NC_009813 (Listeria phage B054, complete genome) position: , mismatch: 1, identity: 0.971

ttgtttgctcctgcatgcttatcaacaaaaaattt	CRISPR spacer
atgtttgctcctgcatgcttatcaacaaaaaattt	Protospacer
 **********************************

33. spacer 1.11|976812|36|NZ_CP013722|CRISPRCasFinder,CRT,PILER-CR matches to MH341451 (Listeria phage PSU-VKH-LP019, complete genome) position: , mismatch: 1, identity: 0.972

cgctgtaattgacttaatacttgtgacgaattcacc	CRISPR spacer
ctctgtaattgacttaatacttgtgacgaattcacc	Protospacer
* **********************************

34. spacer 1.43|978889|36|NZ_CP013722|CRISPRCasFinder,CRT,PILER-CR matches to MH299806 (Listeria phage LP-KV022, complete genome) position: , mismatch: 1, identity: 0.972

aatgatggtatttgtagcgttggtagtattgagtgt	CRISPR spacer
tatgatggtatttgtagcgttggtagtattgagtgt	Protospacer
 ***********************************

35. spacer 1.43|978889|36|NZ_CP013722|CRISPRCasFinder,CRT,PILER-CR matches to JB137888 (Sequence 7 from Patent WO2012159774) position: , mismatch: 1, identity: 0.972

aatgatggtatttgtagcgttggtagtattgagtgt	CRISPR spacer
gatgatggtatttgtagcgttggtagtattgagtgt	Protospacer
.***********************************

36. spacer 1.43|978889|36|NZ_CP013722|CRISPRCasFinder,CRT,PILER-CR matches to MN114083 (Listeria phage LP-013, complete genome) position: , mismatch: 1, identity: 0.972

aatgatggtatttgtagcgttggtagtattgagtgt	CRISPR spacer
tatgatggtatttgtagcgttggtagtattgagtgt	Protospacer
 ***********************************

37. spacer 1.43|978889|36|NZ_CP013722|CRISPRCasFinder,CRT,PILER-CR matches to NC_021785 (Listeria phage LP-110, complete genome) position: , mismatch: 1, identity: 0.972

aatgatggtatttgtagcgttggtagtattgagtgt	CRISPR spacer
tatgatggtatttgtagcgttggtagtattgagtgt	Protospacer
 ***********************************

38. spacer 1.43|978889|36|NZ_CP013722|CRISPRCasFinder,CRT,PILER-CR matches to KJ094026 (Listeria phage LP-032 contig 3, partial genome) position: , mismatch: 1, identity: 0.972

aatgatggtatttgtagcgttggtagtattgagtgt	CRISPR spacer
gatgatggtatttgtagcgttggtagtattgagtgt	Protospacer
.***********************************

39. spacer 1.43|978889|36|NZ_CP013722|CRISPRCasFinder,CRT,PILER-CR matches to MN128593 (Listeria phage LP-031, complete genome) position: , mismatch: 1, identity: 0.972

aatgatggtatttgtagcgttggtagtattgagtgt	CRISPR spacer
tatgatggtatttgtagcgttggtagtattgagtgt	Protospacer
 ***********************************

40. spacer 1.43|978889|36|NZ_CP013722|CRISPRCasFinder,CRT,PILER-CR matches to NC_021787 (Listeria phage LP-037, complete genome) position: , mismatch: 1, identity: 0.972

aatgatggtatttgtagcgttggtagtattgagtgt	CRISPR spacer
gatgatggtatttgtagcgttggtagtattgagtgt	Protospacer
.***********************************

41. spacer 1.43|978889|36|NZ_CP013722|CRISPRCasFinder,CRT,PILER-CR matches to MN904502 (Listeria phage LP-018, complete genome) position: , mismatch: 1, identity: 0.972

aatgatggtatttgtagcgttggtagtattgagtgt	CRISPR spacer
gatgatggtatttgtagcgttggtagtattgagtgt	Protospacer
.***********************************

42. spacer 1.43|978889|36|NZ_CP013722|CRISPRCasFinder,CRT,PILER-CR matches to JX442241 (Listeria phage P70, complete genome) position: , mismatch: 1, identity: 0.972

aatgatggtatttgtagcgttggtagtattgagtgt	CRISPR spacer
gatgatggtatttgtagcgttggtagtattgagtgt	Protospacer
.***********************************

43. spacer 1.43|978889|36|NZ_CP013722|CRISPRCasFinder,CRT,PILER-CR matches to KJ094020 (Listeria phage LP-026, complete genome) position: , mismatch: 1, identity: 0.972

aatgatggtatttgtagcgttggtagtattgagtgt	CRISPR spacer
gatgatggtatttgtagcgttggtagtattgagtgt	Protospacer
.***********************************

44. spacer 1.43|978889|36|NZ_CP013722|CRISPRCasFinder,CRT,PILER-CR matches to MN114082 (Listeria phage LP-010, complete genome) position: , mismatch: 1, identity: 0.972

aatgatggtatttgtagcgttggtagtattgagtgt	CRISPR spacer
tatgatggtatttgtagcgttggtagtattgagtgt	Protospacer
 ***********************************

45. spacer 2.1|996742|36|NZ_CP013722|PILER-CR,CRISPRCasFinder matches to DQ003642 (Listeria phage A006, complete genome) position: , mismatch: 1, identity: 0.972

cgaaattgtaaaatctatatccgttgattcaacaaa	CRISPR spacer
agaaattgtaaaatctatatccgttgattcaacaaa	Protospacer
 ***********************************

46. spacer 2.2|996806|37|NZ_CP013722|PILER-CR,CRISPRCasFinder matches to MT500540 (Listeria phage LP-HM00113468, complete genome) position: , mismatch: 1, identity: 0.973

cttaatttgatagtcataatttatttcctcctatttt	CRISPR spacer
tttaatttgatagtcataatttatttcctcctatttt	Protospacer
.************************************

47. spacer 2.2|996806|37|NZ_CP013722|PILER-CR,CRISPRCasFinder matches to NC_009812 (Listeria phage B025, complete genome) position: , mismatch: 1, identity: 0.973

cttaatttgatagtcataatttatttcctcctatttt	CRISPR spacer
tttaatttgatagtcataatttatttcctcctatttt	Protospacer
.************************************

48. spacer 2.2|996806|37|NZ_CP013722|PILER-CR,CRISPRCasFinder matches to KJ094023 (Listeria phage LP-101, complete genome) position: , mismatch: 1, identity: 0.973

cttaatttgatagtcataatttatttcctcctatttt	CRISPR spacer
tttaatttgatagtcataatttatttcctcctatttt	Protospacer
.************************************

49. spacer 2.3|996871|36|NZ_CP013722|PILER-CR,CRISPRCasFinder matches to NC_021539 (Listeria phage LP-030-2, complete genome) position: , mismatch: 1, identity: 0.972

tatagaaaggagttgatacagtgaaggatgttttag	CRISPR spacer
tatagaaaggagttgagacagtgaaggatgttttag	Protospacer
**************** *******************

50. spacer 2.3|996871|36|NZ_CP013722|PILER-CR,CRISPRCasFinder matches to KJ094023 (Listeria phage LP-101, complete genome) position: , mismatch: 1, identity: 0.972

tatagaaaggagttgatacagtgaaggatgttttag	CRISPR spacer
tatagaaaggagttgagacagtgaaggatgttttag	Protospacer
**************** *******************

51. spacer 2.5|996998|36|NZ_CP013722|PILER-CR,CRISPRCasFinder matches to MH341453 (Listeria phage PSU-VKH-LP041, complete genome) position: , mismatch: 1, identity: 0.972

cttgtaacccatcgctgtccctttgacaaaaatcgc	CRISPR spacer
cttgtaacccatcgctgttcctttgacaaaaatcgc	Protospacer
******************.*****************

52. spacer 2.7|997127|36|NZ_CP013722|PILER-CR,CRISPRCasFinder matches to NZ_LR134403 (Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence) position: , mismatch: 1, identity: 0.972

cgccatttacaatcacccttccggagtttgatctgt	CRISPR spacer
agccatttacaatcacccttccggagtttgatctgt	Protospacer
 ***********************************

53. spacer 2.7|997127|36|NZ_CP013722|PILER-CR,CRISPRCasFinder matches to MT500540 (Listeria phage LP-HM00113468, complete genome) position: , mismatch: 1, identity: 0.972

cgccatttacaatcacccttccggagtttgatctgt	CRISPR spacer
agccatttacaatcacccttccggagtttgatctgt	Protospacer
 ***********************************

54. spacer 2.7|997127|36|NZ_CP013722|PILER-CR,CRISPRCasFinder matches to KJ094023 (Listeria phage LP-101, complete genome) position: , mismatch: 1, identity: 0.972

cgccatttacaatcacccttccggagtttgatctgt	CRISPR spacer
agccatttacaatcacccttccggagtttgatctgt	Protospacer
 ***********************************

55. spacer 2.9|996807|36|NZ_CP013722|CRT matches to NZ_LR134403 (Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence) position: , mismatch: 1, identity: 0.972

ttaatttgatagtcataatttatttcctcctatttt	CRISPR spacer
ttaatttgatagtcataatctatttcctcctatttt	Protospacer
*******************.****************

56. spacer 2.10|996872|35|NZ_CP013722|CRT matches to NC_021539 (Listeria phage LP-030-2, complete genome) position: , mismatch: 1, identity: 0.971

atagaaaggagttgatacagtgaaggatgttttag	CRISPR spacer
atagaaaggagttgagacagtgaaggatgttttag	Protospacer
*************** *******************

57. spacer 2.10|996872|35|NZ_CP013722|CRT matches to KJ094023 (Listeria phage LP-101, complete genome) position: , mismatch: 1, identity: 0.971

atagaaaggagttgatacagtgaaggatgttttag	CRISPR spacer
atagaaaggagttgagacagtgaaggatgttttag	Protospacer
*************** *******************

58. spacer 2.12|996999|35|NZ_CP013722|CRT matches to MH341453 (Listeria phage PSU-VKH-LP041, complete genome) position: , mismatch: 1, identity: 0.971

ttgtaacccatcgctgtccctttgacaaaaatcgc	CRISPR spacer
ttgtaacccatcgctgttcctttgacaaaaatcgc	Protospacer
*****************.*****************

59. spacer 4.6|1793524|30|NZ_CP013722|CRISPRCasFinder,CRT matches to KJ094027 (Listeria phage LP-083-1 contig 1, partial genome) position: , mismatch: 1, identity: 0.967

tactgaccttgactatatcaagtataaact	CRISPR spacer
tactgaccttgactacatcaagtataaact	Protospacer
***************.**************

60. spacer 4.6|1793524|30|NZ_CP013722|CRISPRCasFinder,CRT matches to DQ003641 (Listeria phage P35, complete genome) position: , mismatch: 1, identity: 0.967

tactgaccttgactatatcaagtataaact	CRISPR spacer
tactgaccttgactacatcaagtataaact	Protospacer
***************.**************

61. spacer 4.11|1793854|30|NZ_CP013722|CRISPRCasFinder,CRT matches to MH341452 (Listeria phage PSU-VKH-LP040, complete genome) position: , mismatch: 1, identity: 0.967

acttggcacggaactgtttagagtcggttt	CRISPR spacer
gcttggcacggaactgtttagagtcggttt	Protospacer
.*****************************

62. spacer 4.11|1793854|30|NZ_CP013722|CRISPRCasFinder,CRT matches to DQ003637 (Listeria phage A500, complete genome) position: , mismatch: 1, identity: 0.967

acttggcacggaactgtttagagtcggttt	CRISPR spacer
gcttggcacggaactgtttagagtcggttt	Protospacer
.*****************************

63. spacer 4.12|1793920|30|NZ_CP013722|CRISPRCasFinder,CRT matches to MH341453 (Listeria phage PSU-VKH-LP041, complete genome) position: , mismatch: 1, identity: 0.967

taactcttctttcgtcatgtcgtgatgcgt	CRISPR spacer
taattcttctttcgtcatgtcgtgatgcgt	Protospacer
***.**************************

64. spacer 1.3|976292|37|NZ_CP013722|CRISPRCasFinder,CRT,PILER-CR matches to MN689509 (Lactococcus phage CHPC1175, complete genome) position: , mismatch: 2, identity: 0.946

taagatgtccgataatgaacacgcgttctctgttttg	CRISPR spacer
taagatgtccgataatgaacacacgttctcggttttg	Protospacer
**********************.******* ******

65. spacer 1.3|976292|37|NZ_CP013722|CRISPRCasFinder,CRT,PILER-CR matches to MK448735 (Streptococcus phage Javan349, complete genome) position: , mismatch: 2, identity: 0.946

taagatgtccgataatgaacacgcgttctctgttttg	CRISPR spacer
taagatgtccgacaatgaacacccgttctctgttttg	Protospacer
************.********* **************

66. spacer 1.10|976746|37|NZ_CP013722|CRISPRCasFinder,CRT,PILER-CR matches to MH341452 (Listeria phage PSU-VKH-LP040, complete genome) position: , mismatch: 2, identity: 0.946

gttcgcttaagaccttgtctatatagcctttaataac	CRISPR spacer
gttcacttaaaaccttgtctatatagcctttaataac	Protospacer
****.*****.**************************

67. spacer 1.11|976812|36|NZ_CP013722|CRISPRCasFinder,CRT,PILER-CR matches to KP399677 (Listeria phage vB_LmoS_188, complete genome) position: , mismatch: 2, identity: 0.944

cgctgtaattgacttaatacttgtgacgaattcacc	CRISPR spacer
ctccgtaattgacttaatacttgtgacgaattcacc	Protospacer
* *.********************************

68. spacer 1.11|976812|36|NZ_CP013722|CRISPRCasFinder,CRT,PILER-CR matches to KP399678 (Listeria phage vB_LmoS_293, complete genome) position: , mismatch: 2, identity: 0.944

cgctgtaattgacttaatacttgtgacgaattcacc	CRISPR spacer
ctccgtaattgacttaatacttgtgacgaattcacc	Protospacer
* *.********************************

69. spacer 1.24|977657|36|NZ_CP013722|CRISPRCasFinder,CRT,PILER-CR matches to KP399678 (Listeria phage vB_LmoS_293, complete genome) position: , mismatch: 2, identity: 0.944

tacatgtcgtttaacccgcctcgaaatccttatgag	CRISPR spacer
tacatgtcatttaacccgcctcgcaatccttatgag	Protospacer
********.************** ************

70. spacer 1.26|977787|36|NZ_CP013722|CRISPRCasFinder,CRT,PILER-CR matches to KJ094022 (Listeria phage LP-030-3, complete genome) position: , mismatch: 2, identity: 0.944

taaagaagcgtgatggttgtctaagccgtcgaacaa	CRISPR spacer
taaagaagcgtgatggttgtctaagccgtcgaaaag	Protospacer
********************************* *.

71. spacer 1.31|978109|36|NZ_CP013722|CRISPRCasFinder,CRT,PILER-CR matches to MH341453 (Listeria phage PSU-VKH-LP041, complete genome) position: , mismatch: 2, identity: 0.944

aagtgatacaatgtgttttttattgtcgatgtggac	CRISPR spacer
aagtgatacaatgtgttttttgttgtcaatgtggac	Protospacer
*********************.*****.********

72. spacer 1.42|978823|37|NZ_CP013722|CRISPRCasFinder,CRT,PILER-CR matches to MH299806 (Listeria phage LP-KV022, complete genome) position: , mismatch: 2, identity: 0.946

cgttttaaacaatttgaccactcctacattttgattt	CRISPR spacer
cgttttaaacaatttgaccactcctataatttgattt	Protospacer
**************************.* ********

73. spacer 1.42|978823|37|NZ_CP013722|CRISPRCasFinder,CRT,PILER-CR matches to MN114083 (Listeria phage LP-013, complete genome) position: , mismatch: 2, identity: 0.946

cgttttaaacaatttgaccactcctacattttgattt	CRISPR spacer
cgttttaaacaatttgaccactcctataatttgattt	Protospacer
**************************.* ********

74. spacer 1.42|978823|37|NZ_CP013722|CRISPRCasFinder,CRT,PILER-CR matches to NC_021785 (Listeria phage LP-110, complete genome) position: , mismatch: 2, identity: 0.946

cgttttaaacaatttgaccactcctacattttgattt	CRISPR spacer
cgttttaaacaatttgaccactcctataatttgattt	Protospacer
**************************.* ********

75. spacer 1.42|978823|37|NZ_CP013722|CRISPRCasFinder,CRT,PILER-CR matches to MN128593 (Listeria phage LP-031, complete genome) position: , mismatch: 2, identity: 0.946

cgttttaaacaatttgaccactcctacattttgattt	CRISPR spacer
cgttttaaacaatttgaccactcctataatttgattt	Protospacer
**************************.* ********

76. spacer 1.42|978823|37|NZ_CP013722|CRISPRCasFinder,CRT,PILER-CR matches to NC_021787 (Listeria phage LP-037, complete genome) position: , mismatch: 2, identity: 0.946

cgttttaaacaatttgaccactcctacattttgattt	CRISPR spacer
cgttttaaacaatttgaccactcctataatttgattt	Protospacer
**************************.* ********

77. spacer 1.42|978823|37|NZ_CP013722|CRISPRCasFinder,CRT,PILER-CR matches to MN904502 (Listeria phage LP-018, complete genome) position: , mismatch: 2, identity: 0.946

cgttttaaacaatttgaccactcctacattttgattt	CRISPR spacer
cgttttaaacaatttgaccactcctataatttgattt	Protospacer
**************************.* ********

78. spacer 1.42|978823|37|NZ_CP013722|CRISPRCasFinder,CRT,PILER-CR matches to JX442241 (Listeria phage P70, complete genome) position: , mismatch: 2, identity: 0.946

cgttttaaacaatttgaccactcctacattttgattt	CRISPR spacer
cgttttaaacaatttgaccactcctataatttgattt	Protospacer
**************************.* ********

79. spacer 1.42|978823|37|NZ_CP013722|CRISPRCasFinder,CRT,PILER-CR matches to KJ094021 (Listeria phage LP-114, complete genome) position: , mismatch: 2, identity: 0.946

cgttttaaacaatttgaccactcctacattttgattt	CRISPR spacer
cgttttaaacaatttgaccactcctataatttgattt	Protospacer
**************************.* ********

80. spacer 1.42|978823|37|NZ_CP013722|CRISPRCasFinder,CRT,PILER-CR matches to MN114082 (Listeria phage LP-010, complete genome) position: , mismatch: 2, identity: 0.946

cgttttaaacaatttgaccactcctacattttgattt	CRISPR spacer
cgttttaaacaatttgaccactcctataatttgattt	Protospacer
**************************.* ********

81. spacer 1.43|978889|36|NZ_CP013722|CRISPRCasFinder,CRT,PILER-CR matches to KJ094021 (Listeria phage LP-114, complete genome) position: , mismatch: 2, identity: 0.944

aatgatggtatttgtagcgttggtagtattgagtgt	CRISPR spacer
gatgagggtatttgtagcgttggtagtattgagtgt	Protospacer
.**** ******************************

82. spacer 2.2|996806|37|NZ_CP013722|PILER-CR,CRISPRCasFinder matches to NZ_LR134403 (Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence) position: , mismatch: 2, identity: 0.946

cttaatttgatagtcataatttatttcctcctatttt	CRISPR spacer
tttaatttgatagtcataatctatttcctcctatttt	Protospacer
.*******************.****************

83. spacer 2.3|996871|36|NZ_CP013722|PILER-CR,CRISPRCasFinder matches to NC_009812 (Listeria phage B025, complete genome) position: , mismatch: 2, identity: 0.944

tatagaaaggagttgatacagtgaaggatgttttag	CRISPR spacer
tatagaaaggagttgagatagtgaaggatgttttag	Protospacer
**************** *.*****************

84. spacer 2.5|996998|36|NZ_CP013722|PILER-CR,CRISPRCasFinder matches to NC_009813 (Listeria phage B054, complete genome) position: , mismatch: 2, identity: 0.944

cttgtaacccatcgctgtccctttgacaaaaatcgc	CRISPR spacer
cttgtaacccatcgccgttcctttgacaaaaatcgc	Protospacer
***************.**.*****************

85. spacer 2.10|996872|35|NZ_CP013722|CRT matches to NC_009812 (Listeria phage B025, complete genome) position: , mismatch: 2, identity: 0.943

atagaaaggagttgatacagtgaaggatgttttag	CRISPR spacer
atagaaaggagttgagatagtgaaggatgttttag	Protospacer
*************** *.*****************

86. spacer 2.12|996999|35|NZ_CP013722|CRT matches to NC_009813 (Listeria phage B054, complete genome) position: , mismatch: 2, identity: 0.943

ttgtaacccatcgctgtccctttgacaaaaatcgc	CRISPR spacer
ttgtaacccatcgccgttcctttgacaaaaatcgc	Protospacer
**************.**.*****************

87. spacer 2.14|997128|35|NZ_CP013722|CRT matches to NC_009812 (Listeria phage B025, complete genome) position: , mismatch: 2, identity: 0.943

gccatttacaatcacccttccggagtttgatctgt	CRISPR spacer
gccatttacaatcacccttccggagtttgttctgc	Protospacer
***************************** ****.

88. spacer 4.9|1793722|30|NZ_CP013722|CRISPRCasFinder,CRT matches to MH299806 (Listeria phage LP-KV022, complete genome) position: , mismatch: 2, identity: 0.933

atatagatgtgaaagaagtcccgtccacct	CRISPR spacer
atatagatgtgaaagaagtcccgtcaacgt	Protospacer
************************* ** *

89. spacer 4.9|1793722|30|NZ_CP013722|CRISPRCasFinder,CRT matches to JB137888 (Sequence 7 from Patent WO2012159774) position: , mismatch: 2, identity: 0.933

atatagatgtgaaagaagtcccgtccacct	CRISPR spacer
atatagatgtgaaagaagtgccgtccacat	Protospacer
******************* ******** *

90. spacer 4.9|1793722|30|NZ_CP013722|CRISPRCasFinder,CRT matches to MN114083 (Listeria phage LP-013, complete genome) position: , mismatch: 2, identity: 0.933

atatagatgtgaaagaagtcccgtccacct	CRISPR spacer
atatagatgtgaaagaagtcccgtcaacgt	Protospacer
************************* ** *

91. spacer 4.9|1793722|30|NZ_CP013722|CRISPRCasFinder,CRT matches to NC_021785 (Listeria phage LP-110, complete genome) position: , mismatch: 2, identity: 0.933

atatagatgtgaaagaagtcccgtccacct	CRISPR spacer
atatagatgtgaaagaagtcccgtcaacgt	Protospacer
************************* ** *

92. spacer 4.9|1793722|30|NZ_CP013722|CRISPRCasFinder,CRT matches to MN904502 (Listeria phage LP-018, complete genome) position: , mismatch: 2, identity: 0.933

atatagatgtgaaagaagtcccgtccacct	CRISPR spacer
atatagatgtgaaagaagtcccgtcaacgt	Protospacer
************************* ** *

93. spacer 4.9|1793722|30|NZ_CP013722|CRISPRCasFinder,CRT matches to MN114082 (Listeria phage LP-010, complete genome) position: , mismatch: 2, identity: 0.933

atatagatgtgaaagaagtcccgtccacct	CRISPR spacer
atatagatgtgaaagaagtcccgtcaacgt	Protospacer
************************* ** *

94. spacer 4.11|1793854|30|NZ_CP013722|CRISPRCasFinder,CRT matches to KJ094022 (Listeria phage LP-030-3, complete genome) position: , mismatch: 2, identity: 0.933

acttggcacggaactgtttagagtcggttt	CRISPR spacer
gcttggcacggaactgtttagagttggttt	Protospacer
.***********************.*****

95. spacer 4.11|1793854|30|NZ_CP013722|CRISPRCasFinder,CRT matches to KP399678 (Listeria phage vB_LmoS_293, complete genome) position: , mismatch: 2, identity: 0.933

acttggcacggaactgtttagagtcggttt	CRISPR spacer
gcttggcacggaactgtttagagttggttt	Protospacer
.***********************.*****

96. spacer 4.16|1794184|30|NZ_CP013722|CRISPRCasFinder,CRT,PILER-CR matches to MT500540 (Listeria phage LP-HM00113468, complete genome) position: , mismatch: 2, identity: 0.933

accatccatgaaagatttagaaattttaca	CRISPR spacer
accatccatgaaggacttagaaattttaca	Protospacer
************.**.**************

97. spacer 4.16|1794184|30|NZ_CP013722|CRISPRCasFinder,CRT,PILER-CR matches to NC_009812 (Listeria phage B025, complete genome) position: , mismatch: 2, identity: 0.933

accatccatgaaagatttagaaattttaca	CRISPR spacer
accatccatgaaggacttagaaattttaca	Protospacer
************.**.**************

98. spacer 1.25|977722|36|NZ_CP013722|CRISPRCasFinder,CRT,PILER-CR matches to MH341453 (Listeria phage PSU-VKH-LP041, complete genome) position: , mismatch: 3, identity: 0.917

tccaaactccttccgcacattgggcaatattttata	CRISPR spacer
cccaaactccttccacacattggacaatattttata	Protospacer
.*************.********.************

99. spacer 1.42|978823|37|NZ_CP013722|CRISPRCasFinder,CRT,PILER-CR matches to JB137888 (Sequence 7 from Patent WO2012159774) position: , mismatch: 3, identity: 0.919

cgttttaaacaatttgaccactcctacattttgattt	CRISPR spacer
cgttttaaacaatttgaccactcctatatttttattc	Protospacer
**************************.***** ***.

100. spacer 2.7|997127|36|NZ_CP013722|PILER-CR,CRISPRCasFinder matches to NC_009812 (Listeria phage B025, complete genome) position: , mismatch: 3, identity: 0.917

cgccatttacaatcacccttccggagtttgatctgt	CRISPR spacer
agccatttacaatcacccttccggagtttgttctgc	Protospacer
 ***************************** ****.

101. spacer 4.9|1793722|30|NZ_CP013722|CRISPRCasFinder,CRT matches to KJ094026 (Listeria phage LP-032 contig 3, partial genome) position: , mismatch: 3, identity: 0.9

atatagatgtgaaagaagtcccgtccacct	CRISPR spacer
atatagacgtgaaagaagtcccgtcaacgt	Protospacer
*******.***************** ** *

102. spacer 4.9|1793722|30|NZ_CP013722|CRISPRCasFinder,CRT matches to MN128593 (Listeria phage LP-031, complete genome) position: , mismatch: 3, identity: 0.9

atatagatgtgaaagaagtcccgtccacct	CRISPR spacer
atatagacgtgaaagaagtcccgtcaacgt	Protospacer
*******.***************** ** *

103. spacer 4.9|1793722|30|NZ_CP013722|CRISPRCasFinder,CRT matches to NC_021787 (Listeria phage LP-037, complete genome) position: , mismatch: 3, identity: 0.9

atatagatgtgaaagaagtcccgtccacct	CRISPR spacer
aaatagatgtgaaagaagtcccgtcaacgt	Protospacer
* *********************** ** *

104. spacer 4.9|1793722|30|NZ_CP013722|CRISPRCasFinder,CRT matches to JX442241 (Listeria phage P70, complete genome) position: , mismatch: 3, identity: 0.9

atatagatgtgaaagaagtcccgtccacct	CRISPR spacer
aaatagatgtgaaagaagtcccgtcaacgt	Protospacer
* *********************** ** *

105. spacer 4.9|1793722|30|NZ_CP013722|CRISPRCasFinder,CRT matches to KJ094020 (Listeria phage LP-026, complete genome) position: , mismatch: 3, identity: 0.9

atatagatgtgaaagaagtcccgtccacct	CRISPR spacer
atatagacgtgaaagaagtcccgtcaacgt	Protospacer
*******.***************** ** *

106. spacer 4.9|1793722|30|NZ_CP013722|CRISPRCasFinder,CRT matches to KJ094021 (Listeria phage LP-114, complete genome) position: , mismatch: 3, identity: 0.9

atatagatgtgaaagaagtcccgtccacct	CRISPR spacer
atatagatgtgaaagaagtgccgtcgacgt	Protospacer
******************* ***** ** *

107. spacer 1.20|977397|36|NZ_CP013722|CRISPRCasFinder,CRT,PILER-CR matches to FW590615 (JP 2010534058-A/25: ANTIBIOTIC RESISTANCE FREE LISTERIA STRAINS AND METHODS FOR CONSTRUCTING AND USING SAME) position: , mismatch: 4, identity: 0.889

aaaactagcgaatcaatacggaattaagaattacac	CRISPR spacer
aaaactagcaaatcaatacggaattaaggattataa	Protospacer
*********.******************.****.*

108. spacer 1.20|977397|36|NZ_CP013722|CRISPRCasFinder,CRT,PILER-CR matches to HI504184 (Sequence 26 from Patent EP2147092) position: , mismatch: 4, identity: 0.889

aaaactagcgaatcaatacggaattaagaattacac	CRISPR spacer
aaaactagcaaatcaatacggaattaaggattataa	Protospacer
*********.******************.****.*

109. spacer 1.20|977397|36|NZ_CP013722|CRISPRCasFinder,CRT,PILER-CR matches to AJ417489 (bacteriophage U153 int gene for U153 integrase) position: , mismatch: 4, identity: 0.889

aaaactagcgaatcaatacggaattaagaattacac	CRISPR spacer
aaaactagcaaatcaatacggaattaaggattataa	Protospacer
*********.******************.****.*

110. spacer 1.25|977722|36|NZ_CP013722|CRISPRCasFinder,CRT,PILER-CR matches to KJ094023 (Listeria phage LP-101, complete genome) position: , mismatch: 5, identity: 0.861

tccaaactccttccgcacattgggcaatattttata	CRISPR spacer
tccaagctccttccgcacattgggcaaaattcaatg	Protospacer
*****.********************* ***. **.

111. spacer 2.9|996807|36|NZ_CP013722|CRT matches to JN700520 (Staphylococcus phage StB12, complete genome) position: , mismatch: 5, identity: 0.861

ttaatttga-tagtcataatttatttcctcctatttt	CRISPR spacer
-tagtttgattagtcattatttacttcctcctattta	Protospacer
 **.***** ******* *****.************

112. spacer 4.21|1794515|30|NZ_CP013722|CRISPRCasFinder,CRT matches to MK448753 (Streptococcus phage Javan407, complete genome) position: , mismatch: 5, identity: 0.833

agaacaactacaaaaccagcttcttgagcg	CRISPR spacer
agtacaactacaaaaccagcttcttgttta	Protospacer
** ***********************  ..

113. spacer 1.2|976228|35|NZ_CP013722|CRISPRCasFinder,CRT,PILER-CR matches to MN694189 (Marine virus AFVG_250M578, complete genome) position: , mismatch: 6, identity: 0.829

atttttttcattttctaagtcctcatatttcaaaa	CRISPR spacer
aattttttcattttctaagccctcattttttatta	Protospacer
* *****************.****** ***.*  *

114. spacer 1.27|977852|34|NZ_CP013722|CRISPRCasFinder,CRT,PILER-CR matches to NC_022111 (Prevotella sp. oral taxon 299 str. F0039 plasmid, complete sequence) position: , mismatch: 6, identity: 0.824

gcaaaacaacaaattggaaagatgttttttttct	CRISPR spacer
gtgataaaacaaataggaaagatgtttttttgct	Protospacer
*..* * ******* **************** **

115. spacer 2.2|996806|37|NZ_CP013722|PILER-CR,CRISPRCasFinder matches to JN700520 (Staphylococcus phage StB12, complete genome) position: , mismatch: 6, identity: 0.838

cttaatttga-tagtcataatttatttcctcctatttt	CRISPR spacer
-atagtttgattagtcattatttacttcctcctattta	Protospacer
  **.***** ******* *****.************

116. spacer 4.4|1793392|30|NZ_CP013722|CRISPRCasFinder,CRT matches to NC_020843 (Vibrio phage 11895-B1 genomic sequence) position: , mismatch: 6, identity: 0.8

tatgttatttataataccttctttgtttcc	CRISPR spacer
gattttatttataatcccttctttgatact	Protospacer
 ** *********** ********* * *.

117. spacer 4.4|1793392|30|NZ_CP013722|CRISPRCasFinder,CRT matches to FJ008913 (Bacteroides phage B40-8 culture-collection ATCC:51477-B1, complete genome) position: , mismatch: 7, identity: 0.767

tatgttatttataataccttctttgtttcc	CRISPR spacer
acttttatttataatacattatttgtttat	Protospacer
  * ************* ** ******* .

118. spacer 4.4|1793392|30|NZ_CP013722|CRISPRCasFinder,CRT matches to NC_011222 (Bacteroides phage B40-8, complete genome) position: , mismatch: 7, identity: 0.767

tatgttatttataataccttctttgtttcc	CRISPR spacer
acttttatttataatacattatttgtttat	Protospacer
  * ************* ** ******* .

119. spacer 4.4|1793392|30|NZ_CP013722|CRISPRCasFinder,CRT matches to NZ_CP041069 (Bacillus megaterium strain KNU-01 plasmid pKNU_01_5, complete sequence) position: , mismatch: 7, identity: 0.767

tatgttatttataataccttctttgtttcc	CRISPR spacer
tattttatttataataccttattaaataac	Protospacer
*** **************** ** . *  *

120. spacer 4.4|1793392|30|NZ_CP013722|CRISPRCasFinder,CRT matches to KP282679 (Sulfolobales virus YNP1 strain SYV1, complete genome) position: , mismatch: 7, identity: 0.767

tatgttatttataataccttctttgtttcc	CRISPR spacer
tcttttatttcaaataccttctttgttgaa	Protospacer
* * ******  ***************

121. spacer 4.14|1794052|30|NZ_CP013722|CRISPRCasFinder,CRT,PILER-CR matches to MN961670 (Pseudomonas putida strain 420352 plasmid p420352-IMP, complete sequence) position: , mismatch: 7, identity: 0.767

atcccatttttcaacataataggtagcaac	CRISPR spacer
cccccatttttcaagataattggtaccgtc	Protospacer
 .************ ***** **** *. *

122. spacer 4.21|1794515|30|NZ_CP013722|CRISPRCasFinder,CRT matches to NZ_CP022418 (Sulfitobacter pseudonitzschiae strain SMR1 plasmid pSMR1-3, complete sequence) position: , mismatch: 7, identity: 0.767

agaacaactacaaaaccagcttcttgagcg	CRISPR spacer
tggacagctacaacaccagcttcttgcagg	Protospacer
 *.***.****** ************ . *

123. spacer 4.21|1794515|30|NZ_CP013722|CRISPRCasFinder,CRT matches to JQ807245 (Environmental Halophage eHP-25, partial genome) position: , mismatch: 7, identity: 0.767

agaacaactacaaaaccagcttcttgagcg	CRISPR spacer
ccaacaactacaataccagcttcatcacct	Protospacer
  *********** ********* * * *

124. spacer 1.15|977073|34|NZ_CP013722|CRISPRCasFinder,CRT,PILER-CR matches to KT070867 (Bacillus phage PBC2, complete genome) position: , mismatch: 8, identity: 0.765

gaagaaacaattcaagaacatacggataatttat	CRISPR spacer
ataaacaagattcaagaacatatggataaattat	Protospacer
. *.* * .*************.****** ****

125. spacer 1.20|977397|36|NZ_CP013722|CRISPRCasFinder,CRT,PILER-CR matches to NC_019743 (Microcoleus sp. PCC 7113 plasmid pMIC7113.08, complete sequence) position: , mismatch: 8, identity: 0.778

---aaaactagcgaatcaatacggaattaagaattacac	CRISPR spacer
ttcagagtta---aatcaatacggcagtaagaattacac	Protospacer
   *.*..**   *********** * ************

126. spacer 2.9|996807|36|NZ_CP013722|CRT matches to MW084976 (Bacillus phage Kirov, complete genome) position: , mismatch: 8, identity: 0.778

ttaatttgatagtcataatttatttcctcctatttt	CRISPR spacer
ttcttacgatagccattatttatttcctcctattaa	Protospacer
**  * .*****.*** *****************

127. spacer 4.1|1793194|30|NZ_CP013722|CRISPRCasFinder,CRT matches to NZ_CP041669 (Legionella israelensis strain L18-01051 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.733

ttttgccggatgtgtaatacctttgaaacc	CRISPR spacer
gtcaaagggatgtggaataactttgaaacc	Protospacer
 *. .  ******* **** **********

128. spacer 4.4|1793392|30|NZ_CP013722|CRISPRCasFinder,CRT matches to NZ_CP024317 (Borrelia miyamotoi strain Yekat-6 plasmid pYkt6-lp72, complete sequence) position: , mismatch: 8, identity: 0.733

tatgttatttataataccttctttgtttcc	CRISPR spacer
ttttcattttataataccttttttgtttaa	Protospacer
* * .  *************.*******

129. spacer 4.4|1793392|30|NZ_CP013722|CRISPRCasFinder,CRT matches to NZ_CP024391 (Borrelia miyamotoi strain Izh-4 plasmid pIzh4-lp72, complete sequence) position: , mismatch: 8, identity: 0.733

tatgttatttataataccttctttgtttcc	CRISPR spacer
ttttcattttataataccttttttgtttaa	Protospacer
* * .  *************.*******

130. spacer 4.4|1793392|30|NZ_CP013722|CRISPRCasFinder,CRT matches to NZ_CP024206 (Borrelia miyamotoi strain Izh-5 plasmid pIzh5-lp72, complete sequence) position: , mismatch: 8, identity: 0.733

tatgttatttataataccttctttgtttcc	CRISPR spacer
ttttcattttataataccttttttgtttaa	Protospacer
* * .  *************.*******

131. spacer 4.4|1793392|30|NZ_CP013722|CRISPRCasFinder,CRT matches to NZ_CP024334 (Borrelia miyamotoi strain Yekat-1 plasmid pYkt1-lp72, complete sequence) position: , mismatch: 8, identity: 0.733

tatgttatttataataccttctttgtttcc	CRISPR spacer
ttttcattttataataccttttttgtttaa	Protospacer
* * .  *************.*******

132. spacer 4.4|1793392|30|NZ_CP013722|CRISPRCasFinder,CRT matches to NZ_CP024352 (Borrelia miyamotoi strain Izh-16 plasmid pIzh16-lp72, complete sequence) position: , mismatch: 8, identity: 0.733

tatgttatttataataccttctttgtttcc	CRISPR spacer
ttttcattttataataccttttttgtttaa	Protospacer
* * .  *************.*******

133. spacer 4.4|1793392|30|NZ_CP013722|CRISPRCasFinder,CRT matches to NZ_CP024372 (Borrelia miyamotoi strain Izh-14 plasmid pIzh14-lp72, complete sequence) position: , mismatch: 8, identity: 0.733

tatgttatttataataccttctttgtttcc	CRISPR spacer
ttttcattttataataccttttttgtttaa	Protospacer
* * .  *************.*******

134. spacer 4.7|1793590|30|NZ_CP013722|CRISPRCasFinder,CRT matches to NZ_CP014236 (Moraxella osloensis strain CCUG 350 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.733

aaaaatatttatgcaaatctggctggaaca	CRISPR spacer
aaaaatatttttgcaaatttggcggtggat	Protospacer
********** *******.**** * ..

135. spacer 4.16|1794184|30|NZ_CP013722|CRISPRCasFinder,CRT,PILER-CR matches to NC_007962 (Campylobacter lari plasmid pUPTC237 DNA, complete sequence) position: , mismatch: 8, identity: 0.733

accatccatgaaagatttagaaattttaca	CRISPR spacer
cacatcgatgaaagatttagaaaatctttc	Protospacer
  **** **************** *.* .

136. spacer 4.17|1794250|30|NZ_CP013722|CRISPRCasFinder,CRT,PILER-CR matches to NC_008012 (Lawsonia intracellularis PHE/MN1-00 plasmid 1, complete sequence) position: , mismatch: 8, identity: 0.733

caaatataaaatattcaatagtcctatctt	CRISPR spacer
agtaggtaaaatattcaatatttctatctg	Protospacer
 . * .************** *.******

137. spacer 4.17|1794250|30|NZ_CP013722|CRISPRCasFinder,CRT,PILER-CR matches to NC_020128 (Lawsonia intracellularis N343 plasmid 1, complete sequence) position: , mismatch: 8, identity: 0.733

caaatataaaatattcaatagtcctatctt	CRISPR spacer
agtaggtaaaatattcaatatttctatctg	Protospacer
 . * .************** *.******

138. spacer 4.18|1794316|30|NZ_CP013722|CRISPRCasFinder,CRT,PILER-CR matches to MH316570 (Mycobacterium phage Silvafighter, complete genome) position: , mismatch: 8, identity: 0.733

taaacatcgctcatcgtgtcttctgtcgct	CRISPR spacer
gcaacatcgctcatcgtttctgctgtgtgg	Protospacer
  *************** *** ****

139. spacer 4.18|1794316|30|NZ_CP013722|CRISPRCasFinder,CRT,PILER-CR matches to KU935729 (Mycobacterium phage SkinnyPete, complete genome) position: , mismatch: 8, identity: 0.733

taaacatcgctcatcgtgtcttctgtcgct	CRISPR spacer
gcaacatcgctcatcgtttctcctgtgtgg	Protospacer
  *************** ***.****

140. spacer 4.18|1794316|30|NZ_CP013722|CRISPRCasFinder,CRT,PILER-CR matches to MK494120 (Mycobacterium phage Piper2020, complete genome) position: , mismatch: 8, identity: 0.733

taaacatcgctcatcgtgtcttctgtcgct	CRISPR spacer
gcaacatcgctcatcgtttctcctgtgtgg	Protospacer
  *************** ***.****

141. spacer 4.18|1794316|30|NZ_CP013722|CRISPRCasFinder,CRT,PILER-CR matches to MN693847 (Marine virus AFVG_250M940, complete genome) position: , mismatch: 8, identity: 0.733

taaacatcgctcatcgtgtcttctgtcgct	CRISPR spacer
tagacatcgctcatggtgtcttcggaaagg	Protospacer
**.*********** ******** *  .

142. spacer 4.18|1794316|30|NZ_CP013722|CRISPRCasFinder,CRT,PILER-CR matches to MN694252 (Marine virus AFVG_250M939, complete genome) position: , mismatch: 8, identity: 0.733

taaacatcgctcatcgtgtcttctgtcgct	CRISPR spacer
tagacatcgctcatggtgtcttcggaaagg	Protospacer
**.*********** ******** *  .

143. spacer 4.18|1794316|30|NZ_CP013722|CRISPRCasFinder,CRT,PILER-CR matches to MN693737 (Marine virus AFVG_250M938, complete genome) position: , mismatch: 8, identity: 0.733

taaacatcgctcatcgtgtcttctgtcgct	CRISPR spacer
tagacatcgctcatggtgtcttcggaaagg	Protospacer
**.*********** ******** *  .

144. spacer 4.21|1794515|30|NZ_CP013722|CRISPRCasFinder,CRT matches to NZ_CP044099 (Citrobacter portucalensis strain FDAARGOS_617 plasmid unnamed1) position: , mismatch: 8, identity: 0.733

agaacaactacaaaaccagcttcttgagcg	CRISPR spacer
caaggacgtacaaaaccagcttcttcagct	Protospacer
 .*. *  ***************** ***

145. spacer 4.21|1794515|30|NZ_CP013722|CRISPRCasFinder,CRT matches to AP013457 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G17, isolate: uvMED-CGR-U-MedDCM-OCT-S28-C20) position: , mismatch: 8, identity: 0.733

agaacaactacaaaaccagcttcttgagcg	CRISPR spacer
gggggaactacatatccagcttcttgagat	Protospacer
.*.. ******* * *************

146. spacer 1.2|976228|35|NZ_CP013722|CRISPRCasFinder,CRT,PILER-CR matches to MK448625 (Streptococcus satellite phage Javan738, complete genome) position: , mismatch: 9, identity: 0.743

atttttttcattttctaagtcctcatatttcaaaa	CRISPR spacer
caggtcttcactttctaagtcctcatagttcatac	Protospacer
    *.****.**************** **** *

147. spacer 1.2|976228|35|NZ_CP013722|CRISPRCasFinder,CRT,PILER-CR matches to MK448449 (Streptococcus satellite phage Javan356, complete genome) position: , mismatch: 9, identity: 0.743

atttttttcattttctaagtcctcatatttcaaaa	CRISPR spacer
caggtcttcactttctaagtcctcatagttcatac	Protospacer
    *.****.**************** **** *

148. spacer 1.2|976228|35|NZ_CP013722|CRISPRCasFinder,CRT,PILER-CR matches to MK448636 (Streptococcus satellite phage Javan749, complete genome) position: , mismatch: 9, identity: 0.743

atttttttcattttctaagtcctcatatttcaaaa	CRISPR spacer
caggtcttcactttctaagtcctcatagttcagac	Protospacer
    *.****.**************** ****.*

149. spacer 1.2|976228|35|NZ_CP013722|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP045037 (Lactobacillus mali strain LM596 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.743

atttttttcattttctaagtcctcatatttcaaaa	CRISPR spacer
cataacttcatttactaagtccttatatttcttaa	Protospacer
  *  .******* *********.*******  **

150. spacer 1.2|976228|35|NZ_CP013722|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018177 (Lactobacillus hordei strain TMW 1.1822 plasmid pL11822-1, complete sequence) position: , mismatch: 9, identity: 0.743

atttttttcattttctaagtcctcatatttcaaaa	CRISPR spacer
cataacttcatttactaagtccttatatttcttaa	Protospacer
  *  .******* *********.*******  **

151. spacer 1.2|976228|35|NZ_CP013722|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018181 (Lactobacillus nagelii strain TMW 1.1827 plasmid pL11827-1, complete sequence) position: , mismatch: 9, identity: 0.743

atttttttcattttctaagtcctcatatttcaaaa	CRISPR spacer
cataacttcatttactaagtccttatatttcttaa	Protospacer
  *  .******* *********.*******  **

152. spacer 1.23|977593|35|NZ_CP013722|CRISPRCasFinder,CRT,PILER-CR matches to NC_014533 (Gloeothece verrucosa PCC 7822 plasmid Cy782201, complete sequence) position: , mismatch: 9, identity: 0.743

taatgacatctggtgataaaattgttgaaaaaagc	CRISPR spacer
aaaaattatctgttcataaaattgttgaaaaaact	Protospacer
 ** . .***** * ****************** .

153. spacer 1.27|977852|34|NZ_CP013722|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP038863 (Campylobacter jejuni strain SCJK2 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.735

-----gcaaaacaacaaattggaaagatgttttttttct	CRISPR spacer
tttttggaaa-----aaattggaaatatgtttttttctt	Protospacer
     * ***     ********** **********..*

154. spacer 2.2|996806|37|NZ_CP013722|PILER-CR,CRISPRCasFinder matches to MW084976 (Bacillus phage Kirov, complete genome) position: , mismatch: 9, identity: 0.757

cttaatttgatagtcataatttatttcctcctatttt	CRISPR spacer
tttcttacgatagccattatttatttcctcctattaa	Protospacer
.**  * .*****.*** *****************

155. spacer 4.3|1793326|30|NZ_CP013722|CRISPRCasFinder,CRT matches to NC_021793 (Cellulophaga phage phi48:2, complete genome) position: , mismatch: 9, identity: 0.7

tcattcaaacggaacatttacgaattagtt	CRISPR spacer
ctgaaaaaacggaacatttacaaattaggg	Protospacer
...   ***************.******

156. spacer 4.4|1793392|30|NZ_CP013722|CRISPRCasFinder,CRT matches to NZ_CP039931 (Acinetobacter baumannii strain TG29392 plasmid pTG29392_1, complete sequence) position: , mismatch: 9, identity: 0.7

tatgttatttataataccttctttgtttcc	CRISPR spacer
agcagtatttataatatcttctttttttga	Protospacer
 ... ***********.******* ***

157. spacer 4.4|1793392|30|NZ_CP013722|CRISPRCasFinder,CRT matches to MT774393 (CrAssphage cr127_1, complete genome) position: , mismatch: 9, identity: 0.7

tatgttatttataataccttctttgtttcc	CRISPR spacer
ttgacgttttataataccttctttcttttt	Protospacer
*  ..  ***************** ***..

158. spacer 4.13|1793986|30|NZ_CP013722|CRISPRCasFinder,CRT matches to NC_004961 (Vibrio sp. 41 cryptic plasmid pPS41, complete sequence) position: , mismatch: 9, identity: 0.7

tacaaattaccgtgaaattatgactgcagc	CRISPR spacer
atcaaattaccgtgaaactatgagcttaca	Protospacer
  ***************.***** . .*

159. spacer 4.4|1793392|30|NZ_CP013722|CRISPRCasFinder,CRT matches to NC_021623 (Borrelia hermsii strain HS1 plasmid lp174, complete sequence) position: , mismatch: 10, identity: 0.667

tatgttatttataataccttctttgtttcc---------	CRISPR spacer
tatattatttataatacctt---------caaataagga	Protospacer
***.****************         *

160. spacer 4.4|1793392|30|NZ_CP013722|CRISPRCasFinder,CRT matches to NZ_CP014350 (Borrelia hermsii HS1 isolate Browne Mountain plasmid megaplasmid, complete sequence) position: , mismatch: 10, identity: 0.667

tatgttatttataataccttctttgtttcc---------	CRISPR spacer
tatattatttataatacctt---------caaataagga	Protospacer
***.****************         *

161. spacer 1.7|976554|34|NZ_CP013722|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034816 (Paracoccus sp. Arc7-R13 plasmid unnamed6, complete sequence) position: , mismatch: 11, identity: 0.676

cgcgcgctatttgcgccatttctagcatatcttg	CRISPR spacer
gacgcgctatctgcgccatttcaagcagccggac	Protospacer
 .********.*********** ****  .

162. spacer 2.8|996743|35|NZ_CP013722|CRT matches to NZ_CP029455 (Bacillus cereus strain FORC087 plasmid pFORC087.1, complete sequence) position: , mismatch: 11, identity: 0.686

gaaattgtaaaatctatatccgttgattcaacaaa	CRISPR spacer
aagattttaaaatctatatcggttgatttttttct	Protospacer
.*.*** ************* *******.  .

163. spacer 2.8|996743|35|NZ_CP013722|CRT matches to NZ_CP015592 (Bacillus cereus strain AR156 plasmid pAR460, complete sequence) position: , mismatch: 11, identity: 0.686

gaaattgtaaaatctatatccgttgattcaacaaa	CRISPR spacer
aagattttaaaatctatatcggttgattttttctt	Protospacer
.*.*** ************* *******.  .

164. spacer 2.8|996743|35|NZ_CP013722|CRT matches to NZ_CP009368 (Bacillus cereus strain FM1 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.686

gaaattgtaaaatctatatccgttgattcaacaaa	CRISPR spacer
aagattttaaaatctatatcggttgatttttttct	Protospacer
.*.*** ************* *******.  .

165. spacer 2.8|996743|35|NZ_CP013722|CRT matches to NZ_CP009336 (Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence) position: , mismatch: 11, identity: 0.686

gaaattgtaaaatctatatccgttgattcaacaaa	CRISPR spacer
aagattttaaaatctatatcggttgatttttttct	Protospacer
.*.*** ************* *******.  .

166. spacer 1.15|977073|34|NZ_CP013722|CRISPRCasFinder,CRT,PILER-CR matches to NC_031922 (Synechococcus phage S-CAM9 isolate 1109NB16, complete genome) position: , mismatch: 12, identity: 0.647

gaagaaacaattcaagaacatacggataatttat	CRISPR spacer
ccttctacaatccaagaagatacggataatcctg	Protospacer
      *****.****** ***********..

167. spacer 1.15|977073|34|NZ_CP013722|CRISPRCasFinder,CRT,PILER-CR matches to KU686204 (Synechococcus phage S-CAM9 isolate 0808SB05, complete genome) position: , mismatch: 12, identity: 0.647

gaagaaacaattcaagaacatacggataatttat	CRISPR spacer
ccttctacaatccaagaagatacggataatcctg	Protospacer
      *****.****** ***********..

168. spacer 1.15|977073|34|NZ_CP013722|CRISPRCasFinder,CRT,PILER-CR matches to KU686205 (Synechococcus phage S-CAM9 isolate 0908SB82, complete genome) position: , mismatch: 12, identity: 0.647

gaagaaacaattcaagaacatacggataatttat	CRISPR spacer
ccttctacaatccaagaagatacggataatcctg	Protospacer
      *****.****** ***********..

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

205290 : 266479

Streptococcus_phage(16.67%)

tRNA,protease

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010989734.1\|205290_206997_-\|tRNA	proline--tRNA ligase	NA	NA	NA	NA
WP_003723454.1\|207036_208299_-\|protease	RIP metalloprotease RseP	NA	NA	NA	NA
WP_010989733.1\|208312_209455_-	1-deoxy-D-xylulose-5-phosphate reductoisomerase	NA	NA	NA	NA
WP_003732813.1\|209469_210258_-	phosphatidate cytidylyltransferase	NA	NA	NA	NA
WP_003732812.1\|210271_211030_-	isoprenyl transferase	R9W0U9	Flavobacterium_phage	4.4e-22	42.1
WP_003723450.1\|211259_211817_-	ribosome recycling factor	NA	NA	NA	NA
WP_003723449.1\|211816_212545_-	UMP kinase	NA	NA	NA	NA
WP_003723448.1\|212837_213212_+	hypothetical protein	NA	NA	NA	NA
WP_010989732.1\|213189_214395_+	helicase SNF2	L0P6E9	Lactobacillus_phage	4.9e-92	47.1
WP_003723446.1\|214384_215689_+	DUF3440 domain-containing protein	A0A220GKF8	Streptococcus_phage	9.5e-134	52.1
WP_003723445.1\|215698_216205_+	ParB-like nuclease domain-containing protein	A0A220GKT8	Streptococcus_phage	4.0e-56	66.7
WP_003723444.1\|216226_216958_+	class I SAM-dependent methyltransferase	A0A1X9I6N4	Streptococcus_phage	1.2e-80	59.1
WP_003723443.1\|216976_217819_+	DUF2785 domain-containing protein	NA	NA	NA	NA
WP_003723442.1\|217869_218109_-	YneF family protein	NA	NA	NA	NA
WP_031645059.1\|218329_220324_-	transketolase	NA	NA	NA	NA
WP_003723440.1\|220470_220698_-	DUF896 domain-containing protein	NA	NA	NA	NA
WP_003723439.1\|220789_221119_-	cell division suppressor protein YneA	NA	NA	NA	NA
WP_003723438.1\|221276_221891_+	transcriptional repressor LexA	A0A1B2APZ1	Phage_Wrath	9.3e-15	62.1
WP_003723437.1\|221921_222443_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_012951579.1\|222486_223782_-	arsenic transporter	A0A2H4PQU3	Staphylococcus_phage	2.8e-146	61.9
WP_003723435.1\|223925_225260_-	type I glutamate--ammonia ligase	A0A1V0SJ53	Klosneuvirus	2.0e-06	26.4
WP_003719570.1\|225330_225699_-	MerR family transcriptional regulator	NA	NA	NA	NA
WP_010989728.1\|225902_227129_-	methionine gamma-lyase family protein	NA	NA	NA	NA
WP_077441550.1\|227121_228345_-	GTPase HflX	NA	NA	NA	NA
WP_003719566.1\|228455_228689_-	RNA chaperone Hfq	NA	NA	NA	NA
WP_012951578.1\|228811_229729_-\|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	NA	NA	NA	NA
WP_003723738.1\|229854_231531_-	glycerol-3-phosphate dehydrogenase/oxidase	NA	NA	NA	NA
WP_058876222.1\|231763_232462_-	glycerophosphodiester phosphodiesterase	A0A0S2MYI4	Enterococcus_phage	3.4e-13	33.0
WP_012951576.1\|232674_234543_+	acetyltransferase	B5WZU0	Pseudomonas_phage	6.5e-43	31.9
WP_058876223.1\|234576_236373_-	class 1 internalin InlK	NA	NA	NA	NA
WP_058876224.1\|236704_238438_-	LapB repeat-containing protein	NA	NA	NA	NA
WP_009913867.1\|238764_239232_-	S-ribosylhomocysteine lyase	NA	NA	NA	NA
WP_058876225.1\|239314_241774_-	DNA topoisomerase IV subunit A	G3M9Z5	Bacillus_virus	3.6e-102	31.6
WP_003723731.1\|241770_243738_-	DNA topoisomerase IV subunit B	G3M9Z3	Bacillus_virus	6.7e-123	42.5
WP_003732802.1\|243918_244326_-	CoA-binding protein	NA	NA	NA	NA
WP_003724132.1\|244483_245080_+	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA
WP_009932949.1\|245121_245994_-	aldose 1-epimerase family protein	NA	NA	NA	NA
WP_003724130.1\|245996_246308_-	hypothetical protein	NA	NA	NA	NA
WP_012951573.1\|246330_246750_-	acyl-CoA thioesterase	NA	NA	NA	NA
WP_003726695.1\|246852_247632_-	GTP-sensing pleiotropic transcriptional regulator CodY	NA	NA	NA	NA
WP_010989722.1\|247652_249062_-\|protease	ATP-dependent protease ATPase subunit HslU	W6AS21	Erwinia_phage	4.9e-43	27.7
WP_003724001.1\|249075_249615_-\|protease	ATP-dependent protease subunit HslV	NA	NA	NA	NA
WP_009911635.1\|249635_250538_-	tyrosine recombinase XerC	A0A097EYL9	Mycobacterium_phage	1.2e-13	28.6
WP_009924616.1\|250820_252125_-\|tRNA	FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO	NA	NA	NA	NA
WP_009924617.1\|252187_254266_-	type I DNA topoisomerase	A0A1V0SB35	Catovirus	1.4e-107	37.7
WP_003723892.1\|254537_255398_-	DNA-protecting protein DprA	NA	NA	NA	NA
WP_003723891.1\|255531_256317_-	ribonuclease HII	G4YAY0	Emiliania_huxleyi_virus	3.0e-26	39.2
WP_003723890.1\|256313_257177_-	ribosome biogenesis GTPase YlqF	NA	NA	NA	NA
WP_003723889.1\|257186_257729_-	type I signal peptidase SipZ	NA	NA	NA	NA
WP_009924619.1\|257830_258400_-	type I signal peptidase SipY	NA	NA	NA	NA
WP_003723887.1\|258434_259001_-	type I signal peptidase SipX	NA	NA	NA	NA
WP_003723886.1\|259119_260379_-\|protease	ATP-dependent protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	1.4e-145	63.2
WP_003723884.1\|260564_261848_-	trigger factor	NA	NA	NA	NA
WP_003732796.1\|261962_262901_-	hypothetical protein	NA	NA	NA	NA
WP_058876226.1\|263162_263828_-	hypothetical protein	NA	NA	NA	NA
WP_010989719.1\|263845_264379_-\|protease	matrixin family metalloprotease	NA	NA	NA	NA
WP_003727524.1\|264497_264713_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_003723563.1\|264863_265259_+	helix-turn-helix transcriptional regulator	A9D9J6	Lactobacillus_prophage	1.3e-14	57.4
WP_058876227.1\|265339_266479_+\|protease	PrsW family intramembrane metalloprotease	NA	NA	NA	NA

DBSCAN-SWA_2

398332 : 405755

Hokovirus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_020246560.1\|398332_399889_-	glutamine-hydrolyzing GMP synthase	A0A1V0SH76	Hokovirus	2.3e-17	28.1
WP_003732712.1\|400017_400422_-	PTS sugar transporter subunit IIB	NA	NA	NA	NA
WP_023549061.1\|400482_400791_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
WP_003727000.1\|400803_401628_-	ammonia-dependent NAD(+) synthetase	G3MA24	Bacillus_virus	9.7e-68	52.6
WP_003721509.1\|401639_403130_-	nicotinate phosphoribosyltransferase	G3MA18	Bacillus_virus	9.5e-114	49.7
WP_058876248.1\|403338_404352_-	glycosyltransferase	A0A1V0SAH6	Catovirus	4.6e-11	32.0
WP_014600722.1\|404366_405350_-	glycosyltransferase family 2 protein	A0A1V0SAH6	Catovirus	3.1e-12	35.3
WP_003721506.1\|405371_405755_-	glycerol-3-phosphate cytidylyltransferase	A0A1V0SGE7	Hokovirus	1.4e-16	40.7

DBSCAN-SWA_3

1396796 : 1403321

Streptococcus_pyogenes_phage(33.33%)

tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_009911828.1\|1396796_1397615_-\|tail	phage tail family protein	A0A060AFE1	Staphylococcus_phage	7.2e-39	35.0
WP_058876393.1\|1397611_1399480_-	hypothetical protein	A0A097PAU2	Streptococcus_pyogenes_phage	3.5e-20	45.8
WP_077947099.1\|1399466_1399871_-	phenylalanine racemase	NA	NA	NA	NA
WP_003721745.1\|1399912_1400215_-	hypothetical protein	NA	NA	NA	NA
WP_003721744.1\|1400262_1400775_-\|tail	phage major tail protein, TP901-1 family	A0A097PBF4	Streptococcus_pyogenes_phage	1.2e-47	62.7
WP_003732221.1\|1400787_1401177_-	DUF5072 domain-containing protein	NA	NA	NA	NA
WP_058876394.1\|1401454_1401871_-	hypothetical protein	A8ASQ1	Listeria_phage	6.5e-20	38.6
WP_003732219.1\|1401882_1402311_-	hypothetical protein	NA	NA	NA	NA
WP_003721740.1\|1402527_1402863_+	helix-turn-helix transcriptional regulator	A0A2H4JAR9	uncultured_Caudovirales_phage	4.0e-20	52.5
WP_003721739.1\|1402868_1403321_+	ImmA/IrrE family metallo-endopeptidase	A0A059T7S0	Listeria_phage	4.0e-31	47.9

DBSCAN-SWA_4

1628102 : 1638134

Tupanvirus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003725314.1\|1628102_1629557_-	glycoside hydrolase family 1 protein	A0A0B5JD41	Pandoravirus	1.9e-50	30.3
WP_003734073.1\|1629584_1629935_-	hypothetical protein	NA	NA	NA	NA
WP_003722120.1\|1630073_1631684_+	ABC-F family ATP-binding cassette domain-containing protein	A0A2K9L3Z8	Tupanvirus	1.4e-46	29.5
WP_003722119.1\|1631741_1632272_+	ADP-ribose-binding protein	A0A0K1L687	Scale_drop_disease_virus	2.6e-29	49.3
WP_058876427.1\|1632557_1634024_+	IMP dehydrogenase	A0A1V0SHK8	Klosneuvirus	6.1e-97	40.0
WP_003732117.1\|1634184_1635957_+	DNA helicase RecQ	A0A2K9L3P7	Tupanvirus	6.3e-80	37.1
WP_003722116.1\|1635980_1638134_+	DNA topoisomerase III	A0A1X9I6W8	Streptococcus_phage	4.0e-44	34.1

DBSCAN-SWA_5

1923697 : 1931541

Streptococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003722610.1\|1923697_1924657_+	thioredoxin-disulfide reductase	G3MA85	Bacillus_virus	2.0e-88	53.7
WP_012952019.1\|1924775_1925759_+	UDP-glucose 4-epimerase GalE	A0A2K9L1R4	Tupanvirus	5.8e-51	37.2
WP_026750232.1\|1925775_1926837_+	galactose mutarotase	NA	NA	NA	NA
WP_012952017.1\|1926878_1928609_+	phospho-sugar mutase	A0A1X9I671	Streptococcus_phage	3.0e-175	54.0
WP_003722606.1\|1928716_1929592_+	RNase adapter RapZ	A0A0R8VB27	Thermobifida_phage	1.9e-08	29.7
WP_003722605.1\|1929593_1930562_+	YvcK family protein	A1IMD5	Streptococcus_phage	6.7e-68	43.3
WP_003722604.1\|1930569_1931541_+	DNA-binding protein WhiA	Q7AWZ3	Streptococcus_phage	5.2e-52	39.4

DBSCAN-SWA_6

1935459 : 1977846

Listeria_phage(91.07%)

holin,integrase,tail,terminase

attL 1937900:1937919|attR 1977291:1977310

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003722600.1\|1935459_1936056_-	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	A0A223W000	Agrobacterium_phage	6.6e-58	57.4
WP_058876464.1\|1936212_1937649_+	chitin-binding protein	A0A2D1GD28	Mycobacterium_phage	5.7e-07	29.1
1937900:1937919	attL	NA	NA	NA	NA
WP_003731216.1\|1937924_1939055_-\|integrase	site-specific integrase	A8ATX2	Listeria_phage	9.8e-212	100.0
WP_003731217.1\|1939118_1939628_-	hypothetical protein	A8ATX3	Listeria_phage	2.6e-87	100.0
WP_003731218.1\|1939654_1940146_-	hypothetical protein	A8ATX4	Listeria_phage	2.6e-92	100.0
WP_015987417.1\|1940177_1940486_-	helix-turn-helix transcriptional regulator	A8ATX5	Listeria_phage	9.3e-48	100.0
WP_003731220.1\|1940634_1940886_+	helix-turn-helix transcriptional regulator	A8ATX6	Listeria_phage	7.6e-40	100.0
WP_015987418.1\|1940889_1941126_+	hypothetical protein	A8ATX7	Listeria_phage	1.1e-37	100.0
WP_003731222.1\|1941122_1941476_+	hypothetical protein	A8ATX8	Listeria_phage	9.9e-54	100.0
WP_003731223.1\|1941453_1941996_-	hypothetical protein	A8ATX9	Listeria_phage	2.8e-95	100.0
WP_015987419.1\|1942059_1942833_+	phage repressor protein/antirepressor Ant	A8ATY0	Listeria_phage	1.1e-140	100.0
WP_015987420.1\|1942954_1943479_+	hypothetical protein	A8ATY1	Listeria_phage	6.3e-89	100.0
WP_003731810.1\|1943485_1943722_+	DUF771 domain-containing protein	A8ATY2	Listeria_phage	1.9e-40	100.0
WP_003722564.1\|1943830_1944019_+	hypothetical protein	Q9T175	Listeria_phage	1.8e-22	82.3
WP_003723967.1\|1944251_1945763_+	hypothetical protein	A0A2I7SC81	Paenibacillus_phage	6.1e-76	36.2
WP_058876465.1\|1945755_1946667_+	recombinase RecT	NA	NA	NA	NA
WP_058876466.1\|1946704_1947619_+	DnaD domain-containing protein	A0A0B5D175	Listeria_phage	8.1e-140	90.5
WP_070004445.1\|1947615_1948929_+	DNA (cytosine-5-)-methyltransferase	A0A141E1L1	Streptococcus_phage	1.1e-129	57.1
WP_058876467.1\|1948925_1949489_+	DUF1642 domain-containing protein	A8ATY9	Listeria_phage	7.1e-54	61.9
WP_014601510.1\|1949709_1950111_+	hypothetical protein	A8ATD9	Listeria_phage	2.6e-74	100.0
WP_014601509.1\|1950107_1950317_+	hypothetical protein	A8ATE0	Listeria_phage	1.7e-32	100.0
WP_015967170.1\|1950313_1950712_+	hypothetical protein	A8ATZ3	Listeria_phage	4.4e-66	100.0
WP_015967173.1\|1951155_1951557_+	hypothetical protein	A8ATZ6	Listeria_phage	1.4e-67	100.0
WP_015967174.1\|1951553_1952036_+	single-stranded DNA-binding protein	A8ATZ7	Listeria_phage	1.1e-82	100.0
WP_015967175.1\|1952067_1952373_+	hypothetical protein	A8ATZ8	Listeria_phage	1.7e-46	100.0
WP_014601286.1\|1952369_1952510_+	BH0509 family protein	A8ATZ9	Listeria_phage	2.6e-18	100.0
WP_003769966.1\|1952475_1952880_+	endodeoxyribonuclease	A8AU00	Listeria_phage	5.4e-72	100.0
WP_015967177.1\|1953008_1953173_+	hypothetical protein	A8AU02	Listeria_phage	3.9e-21	100.0
WP_015967178.1\|1953191_1953626_+	hypothetical protein	A8AU03	Listeria_phage	5.1e-76	100.0
WP_015987428.1\|1953807_1954440_+	hypothetical protein	A8AU05	Listeria_phage	1.1e-114	100.0
WP_012951944.1\|1954520_1954748_+	hypothetical protein	A8AU06	Listeria_phage	1.5e-34	100.0
WP_015987406.1\|1954787_1955528_+	hypothetical protein	A8ATU5	Listeria_phage	3.7e-135	100.0
WP_033918288.1\|1955520_1956840_+\|terminase	PBSX family phage terminase large subunit	A8ATU6	Listeria_phage	1.5e-264	99.8
WP_015987416.1\|1956854_1958411_+	hypothetical protein	A8ATU7	Listeria_phage	4.8e-302	100.0
WP_015987421.1\|1958415_1959456_+	hypothetical protein	A8ATU8	Listeria_phage	1.6e-200	100.0
WP_015987425.1\|1959551_1960106_+	hypothetical protein	A8ATU9	Listeria_phage	2.3e-89	100.0
WP_015987427.1\|1960128_1961001_+	F420-dependent oxidoreductase	A8ATV0	Listeria_phage	1.2e-161	100.0
WP_012951937.1\|1961182_1961536_+	hypothetical protein	A8ATV2	Listeria_phage	7.6e-62	100.0
WP_015987430.1\|1961535_1961901_+	hypothetical protein	A8ATV3	Listeria_phage	4.4e-65	100.0
WP_015987407.1\|1961890_1962208_+	HK97 gp10 family phage protein	A8ATV4	Listeria_phage	9.9e-53	100.0
WP_003725064.1\|1962204_1962576_+	hypothetical protein	A8ATV5	Listeria_phage	8.5e-64	100.0
WP_015987408.1\|1962580_1963267_+	Ig domain-containing protein	A8ATV6	Listeria_phage	9.4e-117	100.0
WP_015987409.1\|1963322_1963754_+	hypothetical protein	A8ATV7	Listeria_phage	9.6e-75	100.0
WP_072225507.1\|1963750_1964062_+	hypothetical protein	A8ATV8	Listeria_phage	1.2e-42	98.9
WP_058876468.1\|1964066_1968866_+\|tail	phage tail tape measure protein	A8ATV9	Listeria_phage	0.0e+00	99.9
WP_015987412.1\|1968862_1970431_+	gp16	A8ATW0	Listeria_phage	7.3e-306	100.0
WP_015987413.1\|1970443_1972606_+	gp17	A8ATW1	Listeria_phage	0.0e+00	100.0
WP_003733957.1\|1972656_1972962_+	hypothetical protein	A0A059T5E6	Listeria_phage	1.8e-43	100.0
WP_003723294.1\|1972961_1973243_+\|holin	phage holin	A8ATW3	Listeria_phage	3.0e-45	100.0
WP_015987415.1\|1973242_1973950_+	M15 family metallopeptidase	A8ATW4	Listeria_phage	8.2e-132	100.0
WP_003722520.1\|1973990_1974764_-	DUF3825 domain-containing protein	A8ATW5	Listeria_phage	9.5e-150	100.0
WP_003733661.1\|1975038_1975536_-	AP2 domain-containing protein	A8ATW6	Listeria_phage	3.8e-91	100.0
WP_003722518.1\|1975560_1976010_-	anti-CRISPR protein AcrIIA1	A8ATW7	Listeria_phage	2.4e-76	100.0
WP_003731276.1\|1976010_1976262_-	hypothetical protein	A8ATW8	Listeria_phage	2.0e-40	100.0
WP_003731277.1\|1976293_1976527_-	hypothetical protein	A8ATW9	Listeria_phage	4.3e-13	100.0
WP_009924650.1\|1976825_1977059_+	hypothetical protein	A8ATX0	Listeria_phage	3.3e-37	100.0
WP_003722598.1\|1977510_1977846_-	membrane protein	S5MNN8	Brevibacillus_phage	6.0e-16	76.6
1977291:1977310	attR	NA	NA	NA	NA

DBSCAN-SWA_7

2635285 : 2643571

Synechococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_020246648.1\|2635285_2636578_+	adenylosuccinate lyase	A0A1B3B081	Gordonia_phage	2.5e-17	33.0
WP_014931516.1\|2636658_2637372_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A0E3F9V5	Synechococcus_phage	8.8e-41	37.8
WP_015454911.1\|2637383_2637629_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA
WP_003722247.1\|2637632_2638316_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA
WP_058876548.1\|2638308_2640528_+	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	1.0e-159	41.2
WP_003722245.1\|2640512_2641940_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	1.1e-53	34.6
WP_031665593.1\|2641958_2643008_+	phosphoribosylformylglycinamidine cyclo-ligase	Q58MH8	Prochlorococcus_phage	9.2e-63	44.4
WP_031665594.1\|2643004_2643571_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	7.0e-25	35.9

Anti-CRISPR protein detection

Acr_ID: NZ_CP013722.1|WP_003731276.1|1976010_1976262_-|hypothetical-protein

Click the colored protein region to show detailed information

Acr_ID: NZ_CP013722.1|WP_003731277.1|1976293_1976527_-|hypothetical-protein

Click the colored protein region to show detailed information

Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_CP013722.1|WP_003731276.1|1976010_1976262_-|hypothetical-protein

1976010_1976262_-

83 aa aa

AcrIIA12

hit_Aca_id	identity	query_coverage	hit_coverage
anti_CRISPR3641\|WP_003731276.1\|AcrIIA12\|II-A\|Verified\|Listeria-monocytogenes	1.0	1	1.0

1935459-1977846

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_CP013722_1	Unclear	1.11\|976812\|36\|NZ_CP013722\|CRISPRCasFinder,CRT,PILER-CR	976812-976847	36	1946902-1946867	0
NZ_CP013722_2	Unclear	2.8\|996743\|35\|NZ_CP013722\|CRT	996743-996777	35	1970471-1970505	0

1. spacer 1.11|976812|36|NZ_CP013722|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013722 position: 1946902-1946867, mismatch: 0

cgctgtaattgacttaatacttgtgacgaattcacc	CRISPR spacer
cgctgtaattgacttaatacttgtgacgaattcacc	Protospacer
************************************

2. spacer 2.8|996743|35|NZ_CP013722|CRT matches to NZ_CP013722 position: 1970471-1970505, mismatch: 0

gaaattgtaaaatctatatccgttgattcaacaaa	CRISPR spacer
gaaattgtaaaatctatatccgttgattcaacaaa	Protospacer
***********************************

NZ_CP013722.1|WP_003731277.1|1976293_1976527_-|hypothetical-protein

1976293_1976527_-

77 aa aa

1935459-1977846

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_CP013722_1	Unclear	1.11\|976812\|36\|NZ_CP013722\|CRISPRCasFinder,CRT,PILER-CR	976812-976847	36	1946902-1946867	0
NZ_CP013722_2	Unclear	2.8\|996743\|35\|NZ_CP013722\|CRT	996743-996777	35	1970471-1970505	0

1. spacer 1.11|976812|36|NZ_CP013722|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013722 position: 1946902-1946867, mismatch: 0

cgctgtaattgacttaatacttgtgacgaattcacc	CRISPR spacer
cgctgtaattgacttaatacttgtgacgaattcacc	Protospacer
************************************

2. spacer 2.8|996743|35|NZ_CP013722|CRT matches to NZ_CP013722 position: 1970471-1970505, mismatch: 0

gaaattgtaaaatctatatccgttgattcaacaaa	CRISPR spacer
gaaattgtaaaatctatatccgttgattcaacaaa	Protospacer
***********************************

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP013722

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information