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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_FCLM01000011 Serratia marcescens strain 2880STDY5682987, whole genome shotgun sequence 0 crisprs NA 0 0 0 0
NZ_FCLM01000012 Serratia marcescens strain 2880STDY5682987, whole genome shotgun sequence 0 crisprs cas3 0 0 0 0
NZ_FCLM01000005 Serratia marcescens strain 2880STDY5682987, whole genome shotgun sequence 0 crisprs DEDDh 0 0 1 1
NZ_FCLM01000022 Serratia marcescens strain 2880STDY5682987, whole genome shotgun sequence 0 crisprs NA 0 0 0 0
NZ_FCLM01000007 Serratia marcescens strain 2880STDY5682987, whole genome shotgun sequence 0 crisprs NA 0 0 0 0
NZ_FCLM01000001 Serratia marcescens strain 2880STDY5682987, whole genome shotgun sequence 0 crisprs cas3,DinG,csa3,WYL,DEDDh 0 0 2 0
NZ_FCLM01000017 Serratia marcescens strain 2880STDY5682987, whole genome shotgun sequence 0 crisprs NA 0 0 0 0
NZ_FCLM01000018 Serratia marcescens strain 2880STDY5682987, whole genome shotgun sequence 0 crisprs NA 0 0 0 0
NZ_FCLM01000024 Serratia marcescens strain 2880STDY5682987, whole genome shotgun sequence 0 crisprs NA 0 0 0 0
NZ_FCLM01000013 Serratia marcescens strain 2880STDY5682987, whole genome shotgun sequence 0 crisprs DEDDh 0 0 0 0
NZ_FCLM01000006 Serratia marcescens strain 2880STDY5682987, whole genome shotgun sequence 0 crisprs NA 0 0 2 0
NZ_FCLM01000003 Serratia marcescens strain 2880STDY5682987, whole genome shotgun sequence 0 crisprs NA 0 0 1 0
NZ_FCLM01000008 Serratia marcescens strain 2880STDY5682987, whole genome shotgun sequence 0 crisprs NA 0 0 0 0
NZ_FCLM01000014 Serratia marcescens strain 2880STDY5682987, whole genome shotgun sequence 0 crisprs NA 0 0 0 0
NZ_FCLM01000021 Serratia marcescens strain 2880STDY5682987, whole genome shotgun sequence 0 crisprs NA 0 0 0 0
NZ_FCLM01000020 Serratia marcescens strain 2880STDY5682987, whole genome shotgun sequence 0 crisprs NA 0 0 0 0
NZ_FCLM01000023 Serratia marcescens strain 2880STDY5682987, whole genome shotgun sequence 0 crisprs NA 0 0 0 0
NZ_FCLM01000015 Serratia marcescens strain 2880STDY5682987, whole genome shotgun sequence 0 crisprs NA 0 0 0 0
NZ_FCLM01000019 Serratia marcescens strain 2880STDY5682987, whole genome shotgun sequence 0 crisprs NA 0 0 0 0
NZ_FCLM01000010 Serratia marcescens strain 2880STDY5682987, whole genome shotgun sequence 0 crisprs cas3,PD-DExK 0 0 2 0
NZ_FCLM01000009 Serratia marcescens strain 2880STDY5682987, whole genome shotgun sequence 0 crisprs WYL 0 0 0 0
NZ_FCLM01000016 Serratia marcescens strain 2880STDY5682987, whole genome shotgun sequence 0 crisprs NA 0 0 0 0
NZ_FCLM01000002 Serratia marcescens strain 2880STDY5682987, whole genome shotgun sequence 0 crisprs cas14j,DEDDh 0 0 1 0
NZ_FCLM01000004 Serratia marcescens strain 2880STDY5682987, whole genome shotgun sequence 0 crisprs NA 0 0 0 0

Results visualization

1. NZ_FCLM01000001
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 24948 29 Pseudomonas_phage(25.0%) portal,terminase,holin,tail,protease,plate NA
DBSCAN-SWA_2 1198149 : 1253255 50 Tupanvirus(22.22%) tRNA,coat,protease NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_FCLM01000003
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 308595 : 322942 7 Tupanvirus(50.0%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
3. NZ_FCLM01000010
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 416 : 7263 12 Enterobacteria_phage(37.5%) NA NA
DBSCAN-SWA_2 91794 : 101749 12 Streptococcus_phage(14.29%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
4. NZ_FCLM01000005
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 400 : 10943 20 Enterobacteria_phage(20.0%) integrase attL 5285:5298|attR 11346:11359
Click the colored protein region to show detailed information
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
NZ_FCLM01000005.1|WP_049300010.1|8579_8789_-|hypothetical-protein 8579_8789_- 69 aa aa AcrIF18.1 NA NZ_FCLM01000005.1_8388_8580_- 400-10943 NA
5. NZ_FCLM01000002
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 506044 : 604088 94 Vibrio_phage(46.94%) protease,tRNA,integrase,head,plate,tail,transposase attL 564169:564185|attR 600703:600719
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
6. NZ_FCLM01000006
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 840 : 74426 69 Enterobacteria_phage(16.67%) head,tail,tRNA,portal,holin,capsid,terminase,protease NA
DBSCAN-SWA_2 93063 : 141177 58 Salmonella_phage(21.74%) terminase,tail,integrase,holin attL 90904:90919|attR 104952:104967
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage