CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_LUEQ01000010	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0009, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000033	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0033, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000015	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0014, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000214	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0216, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000266	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0271, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000110	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0111, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000259	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0263, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000125	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0126, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000058	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0058, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000180	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0182, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000167	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0169, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000106	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0107, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000239	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0242, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000012	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0011, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000242	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0245, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000076	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0076, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000103	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0104, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000234	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0237, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000137	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0138, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000056	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0056, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000220	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0223, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000077	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0078, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000039	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0039, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000213	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0215, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000273	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0278, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000211	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0213, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000030	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0030, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000261	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0265, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000176	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0178, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000108	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0109, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000098	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0099, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000073	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0073, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000127	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0128, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000093	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0094, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000105	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0106, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000191	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0193, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000096	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0097, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000095	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0096, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000179	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0181, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000087	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0088, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000053	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0053, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000263	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0268, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000236	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0239, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000155	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0157, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000184	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0186, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000032	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0032, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000006	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0005, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000260	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0264, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000171	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0173, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000129	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0130, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000102	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0103, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000198	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0200, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000278	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0283, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000162	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0164, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000230	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0233, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000248	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0251, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000222	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0225, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000201	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0203, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000031	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0031, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000109	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0110, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000124	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0125, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000219	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0222, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000079	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0080, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000029	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0029, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000269	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0274, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000237	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0240, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000197	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0199, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000078	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0079, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000268	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0273, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000066	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0066, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000188	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0190, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000084	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0085, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000275	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0280, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000036	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0036, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000160	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0162, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000002	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0001, whole genome shotgun sequence	0 crisprs	DinG	0	0	0	0
NZ_LUEQ01000120	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0121, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000189	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0191, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000104	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0105, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000121	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0122, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000009	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0008, whole genome shotgun sequence	0 crisprs	DinG	0	0	1	0
NZ_LUEQ01000196	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0198, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000005	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0004, whole genome shotgun sequence	0 crisprs	casR,WYL	0	0	0	0
NZ_LUEQ01000274	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0279, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000088	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0089, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000271	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0276, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000204	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0206, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000041	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0041, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000240	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0243, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000170	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0172, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000008	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0007, whole genome shotgun sequence	0 crisprs	cas3	0	0	0	0
NZ_LUEQ01000145	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0146, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000081	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0082, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000007	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0006, whole genome shotgun sequence	0 crisprs	NA	0	0	1	0
NZ_LUEQ01000026	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0026, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000233	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0236, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000205	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0207, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000038	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0038, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000148	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0150, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000091	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0092, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000118	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0119, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000022	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0022, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000277	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0282, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000072	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0072, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000221	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0224, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000226	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0229, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000089	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0090, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000265	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0270, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000202	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0204, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000082	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0083, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000199	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0201, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000158	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0160, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000019	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0019, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000114	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0115, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000097	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0098, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000200	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0202, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000257	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0261, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000075	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0075, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000144	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0145, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000070	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0070, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000276	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0281, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000113	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0114, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000183	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0185, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000014	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0013, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000241	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0244, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000215	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0217, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000217	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0219, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000186	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0188, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000100	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0101, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000035	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0035, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000034	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0034, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000169	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0171, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000092	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0093, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000117	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0118, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000040	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0040, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000054	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0054, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000112	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0113, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000151	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0153, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000025	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0025, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000149	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0151, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000071	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0071, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000175	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0177, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000020	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0020, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000060	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0060, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000126	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0127, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000133	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0134, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000247	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0250, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000134	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0135, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000264	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0269, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000107	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0108, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000251	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0255, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000153	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0155, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000143	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0144, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000068	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0068, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000244	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0247, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000021	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0021, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000011	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0010, whole genome shotgun sequence	0 crisprs	cas5	0	0	0	1
NZ_LUEQ01000080	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0081, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000074	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0074, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000272	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0277, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000045	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0045, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000181	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0183, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000165	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0167, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000262	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0266, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000043	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0043, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000173	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0175, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000017	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0017, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000216	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0218, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000018	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0018, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000166	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0168, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000249	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0252, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000001	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0000, whole genome shotgun sequence	2 crisprs	DEDDh,cas3,cas2,cas1,cas5,cas7,cas8b2,cas6	5	15	2	0
NZ_LUEQ01000255	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0259, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000206	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0208, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000250	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0253, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000203	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0205, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000128	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0129, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000123	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0124, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000116	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0117, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000152	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0154, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000246	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0249, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000254	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0258, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000115	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0116, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000083	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0084, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000090	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0091, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000130	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0131, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000059	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0059, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000101	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0102, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000063	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0063, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000067	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0067, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000132	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0133, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000253	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0257, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000069	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0069, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000027	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0027, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000042	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0042, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000209	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0211, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000156	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0158, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000174	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0176, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000061	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0061, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000122	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0123, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000225	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0228, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000044	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0044, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000139	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0140, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000055	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0055, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000267	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0272, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000168	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0170, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000195	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0197, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000142	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0143, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000223	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0226, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000212	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0214, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000194	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0196, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000218	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0221, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000051	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0051, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000177	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0179, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000245	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0248, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000279	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0284, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000150	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0152, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000159	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0161, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000190	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0192, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000232	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0235, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000193	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0195, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000024	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0024, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000046	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0046, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000131	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0132, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000111	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0112, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000228	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0231, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000178	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0180, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000231	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0234, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000146	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0147, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000049	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0049, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000064	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0064, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000119	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0120, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000192	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0194, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000013	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0012, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000048	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0048, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000182	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0184, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000243	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0246, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000028	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0028, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000003	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0002, whole genome shotgun sequence	1 crisprs	csa3,cas9,cas1,cas2,csn2	3	17	0	0
NZ_LUEQ01000141	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0142, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000185	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0187, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000270	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0275, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000161	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0163, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000135	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0136, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000164	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0166, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000163	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0165, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000227	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0230, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000016	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0016, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000094	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0095, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000224	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0227, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000050	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0050, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000157	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0159, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000187	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0189, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000252	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0256, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000004	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0003, whole genome shotgun sequence	1 crisprs	WYL,csa3	0	0	1	1
NZ_LUEQ01000140	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0141, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000207	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0209, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000057	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0057, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000099	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0100, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000136	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0137, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000147	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0149, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000037	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0037, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000154	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0156, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000172	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0174, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000023	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0023, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000208	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0210, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000052	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0052, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000047	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0047, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000235	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0238, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000210	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0212, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000062	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0062, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000256	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0260, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000258	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0262, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000085	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0086, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000138	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0139, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000229	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0232, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000065	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0065, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000086	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0087, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_LUEQ01000238	Listeria monocytogenes strain CFSAN026587 CFSAN026587_contig0241, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_LUEQ01000004_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LUEQ01000004_1

80731-80892

Orphan

Consensus_repeat	Method
TTTTTTTATGGAAACAACGCTCCACTTCGTTACGCCTTGTATTGGAGTTCTAGGG	CRISPRCasFinder

1 spacers

WYL

The CRISPR arrays of NZ_LUEQ01000004_1

>merge|NZ_LUEQ01000004|1|80731-80892|CRISPRCasFinder
TTTTTTTATGGAAACAACGCTCCACTTCGTTACGCCTTGTATTGGAGTTCTAGGGGATTGGTTGAATTTAATAATTTGTGCTTCCCTTTTCGGGTTGTTCGTCCACTTTTTTTAATGGAAACAACGCTCCACTTCGTTACGCCTTGTATTGGAGTTCTAGGG

>NZ_LUEQ01000004|1|1|80731-80892|CRISPRCasFinder
TTTTTTTATGGAAACAACGCTCCACTTCGTTACGCCTTGTATTGGAGTTCTAGGG	GATTGGTTGAATTTAATAATTTGTGCTTCCCTTTTCGGGTTGTTCGTCCACT
TTTTTTAATGGAAACAACGCTCCACTTCGTTACGCCTTGTATTGGAGTTCTAGGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LUEQ01000004.1\|WP_061665491.1\|75997_76906_+\|Rgg/GadR/MutR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_LUEQ01000004.1\|WP_061665490.1\|72339_75615_-\|carbohydrate-binding-protein	unknown	unknown	gnl\|CDD\|224418
NZ_LUEQ01000004.1\|WP_003723344.1\|65275_65845_-\|YdcF-family-protein	unknown	unknown	gnl\|CDD\|99750
NZ_LUEQ01000004.1\|WP_010989997.1\|87116_88307_-\|phosphoglycerate-kinase	unknown	unknown	gnl\|CDD\|234613
NZ_LUEQ01000004.1\|WP_003772391.1\|83077_83251_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LUEQ01000004.1\|WP_009925021.1\|82225_82945_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
NZ_LUEQ01000004.1\|WP_061665489.1\|71335_72280_-\|lmo2445-family-class-3-internalin	unknown	unknown	gnl\|CDD\|275380
NZ_LUEQ01000004.1\|WP_003723350.1\|76961_77426_-\|SsrA-binding-protein-SmpB	unknown	unknown	gnl\|CDD\|376590
NZ_LUEQ01000004.1\|WP_003732485.1\|88441_89452_-\|type-I-glyceraldehyde-3-phosphate-dehydrogenase	unknown	unknown	gnl\|CDD\|273675
NZ_LUEQ01000004.1\|WP_003727926.1\|80966_81200_-\|preprotein-translocase-subunit-SecG	unknown	unknown	gnl\|CDD\|224233
NZ_LUEQ01000004.1\|WP_023548402.1\|66020_66440_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LUEQ01000004.1\|WP_003732482.1\|81299_82043_-\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|224561
NZ_LUEQ01000004.1\|WP_061665492.1\|89483_90530_-\|sugar-binding-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225263
NZ_LUEQ01000004.1\|WP_061105182.1\|77441_79823_-\|ribonuclease-R	unknown	unknown	gnl\|CDD\|273947
NZ_LUEQ01000004.1\|WP_003723925.1\|86315_87071_-\|triose-phosphate-isomerase	unknown	unknown	gnl\|CDD\|234589
NZ_LUEQ01000004.1\|WP_039119871.1\|64334_65231_-\|YafY-family-transcriptional-regulator	WYL	COG2378_WYL_CAS-I:CAS-III	gnl\|CDD\|225253
NZ_LUEQ01000004.1\|WP_003727923.1\|83353_84646_-\|phosphopyruvate-hydratase	unknown	unknown	gnl\|CDD\|234617
NZ_LUEQ01000004.1\|WP_031665508.1\|79856_80603_-\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|224561
NZ_LUEQ01000004.1\|WP_061665488.1\|67388_71321_-\|DUF5110-domain-containing-protein	unknown	unknown	gnl\|CDD\|224418
NZ_LUEQ01000004.1\|WP_003732483.1\|84781_86314_-\|2,3-bisphosphoglycerate-independent-phosphoglycerate-mutase	unknown	unknown	gnl\|CDD\|235463

Protein	Function_ID	Function_description	E-value
NZ_LUEQ01000004.1\|WP_061665491.1\|75997_76906_+\|Rgg/GadR/MutR-family-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	6.74582e-08
NZ_LUEQ01000004.1\|WP_061665490.1\|72339_75615_-\|carbohydrate-binding-protein	gnl\|CDD\|224418	COG1501, COG1501, Alpha-glucosidases, family 31 of glycosyl hydrolases [Carbohydrate transport and metabolism].	0
NZ_LUEQ01000004.1\|WP_003723344.1\|65275_65845_-\|YdcF-family-protein	gnl\|CDD\|99750	cd06259, YdcF-like, YdcF-like. YdcF-like is a large family of mainly bacterial proteins, with a few members found in fungi, plants, and archaea. Escherichia coli YdcF has been shown to bind S-adenosyl-L-methionine (AdoMet), but a biochemical function has not been idenitified. The family also includes Escherichia coli sanA and Salmonella typhimurium sfiX, which are involved in vancomycin resistance; sfiX may also be involved in murein synthesis.	2.8348e-39
NZ_LUEQ01000004.1\|WP_010989997.1\|87116_88307_-\|phosphoglycerate-kinase	gnl\|CDD\|234613	PRK00073, pgk, phosphoglycerate kinase; Provisional.	0
NZ_LUEQ01000004.1\|WP_003732483.1\|84781_86314_-\|2,3-bisphosphoglycerate-independent-phosphoglycerate-mutase	gnl\|CDD\|235463	PRK05434, PRK05434, 2,3-bisphosphoglycerate-independent phosphoglycerate mutase.	0
NZ_LUEQ01000004.1\|WP_009925021.1\|82225_82945_-\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	4.31126e-18
NZ_LUEQ01000004.1\|WP_061665489.1\|71335_72280_-\|lmo2445-family-class-3-internalin	gnl\|CDD\|275380	sd00033, LRR_RI, leucine-rich repeats, ribonuclease inhibitor (RI)-like subfamily. A leucine-rich repeat (LRR) is a structural protein motif of 20-30 amino acids that is unusually rich in the hydrophobic amino acid leucine. The conserved eleven-residue sequence motif (LxxLxLxxN/CxL) within the LRRs corresponds to the beta-strand and adjacent loop regions, whereas the remaining parts of the repeats are variable. LRRs fold together to form a solenoid protein domain, termed leucine-rich repeat domain. Leucine-rich repeats are usually involved in protein-protein interactions.	5.23241e-06
NZ_LUEQ01000004.1\|WP_003723350.1\|76961_77426_-\|SsrA-binding-protein-SmpB	gnl\|CDD\|376590	pfam01668, SmpB, SmpB protein.	2.29197e-92
NZ_LUEQ01000004.1\|WP_003732485.1\|88441_89452_-\|type-I-glyceraldehyde-3-phosphate-dehydrogenase	gnl\|CDD\|273675	TIGR01534, Glyceraldehyde-3-phosphate_dehydrogenase, glyceraldehyde-3-phosphate dehydrogenase, type I. This model represents glyceraldehyde-3-phosphate dehydrogenase (GAPDH), the enzyme responsible for the interconversion of 1,3-diphosphoglycerate and glyceraldehyde-3-phosphate, a central step in glycolysis and gluconeogenesis. Forms exist which utilize NAD (EC 1.2.1.12), NADP (EC 1.2.1.13) or either (1.2.1.59). In some species, NAD- and NADP- utilizing forms exist, generally being responsible for reactions in the anabolic and catabolic directions respectively. Two Pfam models cover the two functional domains of this protein; pfam00044 represents the N-terminal NAD(P)-binding domain and pfam02800 represents the C-terminal catalytic domain. An additional form of gap gene is found in gamma proteobacteria and is responsible for the conversion of erythrose-4-phosphate (E4P) to 4-phospho-erythronate in the biosynthesis of pyridoxine. This pathway of pyridoxine biosynthesis appears to be limited, however, to a relatively small number of bacterial species although it is prevalent among the gamma-proteobacteria. This enzyme is described by TIGR001532. These sequences generally score between trusted and noise to this GAPDH model due to the close evolutionary relationship. There exists the possiblity that some forms of GAPDH may be bifunctional and act on E4P in species which make pyridoxine and via hydroxythreonine and lack a separate E4PDH enzyme (for instance, the GAPDH from Bacillus stearothermophilus has been shown to posess a limited E4PD activity as well as a robust GAPDH activity). There are a great number of sequences in the databases which score between trusted and noise to this model, nearly all of them due to fragmentary sequences. It seems that study of this gene has been carried out in many species utilizing PCR probes which exclude the extreme ends of the consenses used to define this model. The noise level is set relative not to E4PD, but the next closest outliers, the class II GAPDH's (found in archaea, TIGR01546) and aspartate semialdehyde dehydrogenase (ASADH, TIGR01296) both of which have highest-scoring hits around -225 to the prior model. [Energy metabolism, Glycolysis/gluconeogenesis].	0
NZ_LUEQ01000004.1\|WP_003727926.1\|80966_81200_-\|preprotein-translocase-subunit-SecG	gnl\|CDD\|224233	COG1314, SecG, Preprotein translocase subunit SecG [Intracellular trafficking and secretion].	6.04836e-13
NZ_LUEQ01000004.1\|WP_003732482.1\|81299_82043_-\|alpha/beta-fold-hydrolase	gnl\|CDD\|224561	COG1647, COG1647, Esterase/lipase [General function prediction only].	1.94931e-122
NZ_LUEQ01000004.1\|WP_061665492.1\|89483_90530_-\|sugar-binding-transcriptional-regulator	gnl\|CDD\|225263	COG2390, DeoR, Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription].	5.51138e-92
NZ_LUEQ01000004.1\|WP_061105182.1\|77441_79823_-\|ribonuclease-R	gnl\|CDD\|273947	TIGR02063, Ribonuclease_R, ribonuclease R. This family consists of an exoribonuclease, ribonuclease R, also called VacB. It is one of the eight exoribonucleases reported in E. coli and is broadly distributed throughout the bacteria. In E. coli, double mutants of this protein and polynucleotide phosphorylase are not viable. Scoring between trusted and noise cutoffs to the model are shorter, divergent forms from the Chlamydiae, and divergent forms from the Campylobacterales (including Helicobacter pylori) and Leptospira interrogans. [Transcription, Degradation of RNA].	0
NZ_LUEQ01000004.1\|WP_003723925.1\|86315_87071_-\|triose-phosphate-isomerase	gnl\|CDD\|234589	PRK00042, tpiA, triosephosphate isomerase; Provisional.	7.345e-145
NZ_LUEQ01000004.1\|WP_039119871.1\|64334_65231_-\|YafY-family-transcriptional-regulator	gnl\|CDD\|225253	COG2378, COG2378, Predicted transcriptional regulator [Transcription].	2.52424e-70
NZ_LUEQ01000004.1\|WP_003727923.1\|83353_84646_-\|phosphopyruvate-hydratase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
NZ_LUEQ01000004.1\|WP_031665508.1\|79856_80603_-\|alpha/beta-fold-hydrolase	gnl\|CDD\|224561	COG1647, COG1647, Esterase/lipase [General function prediction only].	1.50443e-136
NZ_LUEQ01000004.1\|WP_061665488.1\|67388_71321_-\|DUF5110-domain-containing-protein	gnl\|CDD\|224418	COG1501, COG1501, Alpha-glucosidases, family 31 of glycosyl hydrolases [Carbohydrate transport and metabolism].	0

>NZ_LUEQ01000004.1|WP_031665508.1|79856_80603_-|alpha/beta-fold-hydrolase
MKITPPQPFLFEKGKRAVLLLHGFTGSSADVRILGRFLQENNYTCYAPQYRGHGVSPDLLLKTGPNDWWEDVLEAYDHLKSLGYTEIAVAGLSLGGLFSLKLGFSRPLKGIIAMSTPTRMDSSSPIIQGFLDYVRNYKKLEGKTIEQIDAEMVAYKDAPMNTIAKLKDEISGVVAEIDMIYAPIMVVQGEKDDMVDVSGAQLIYDTVESTKKELHWFKESGHVITLDKERKEVNQAILTFLDSLDWQE
>NZ_LUEQ01000004.1|WP_061105182.1|77441_79823_-|ribonuclease-R
MEQKQMEEKIMNLLTSAPDKTFALEDLEIEIALNNADDFKLMVKALVKLEDSGTIVRSRKNRYALPEKMDLVKGTFRAHERGFGFVLPEEKEMDDIFIPPNEVKDAMNGDLVFATITKRKGDNLAEGTIKKIVERKTTQIVGTYMEDLAGIPIVMPDDKRLFGEVEIDLEDGLKPVDGHKVIVELTEYATGNTRARGVVKSIIGHRNDPGVDILSIIHKHGISIGFPEEVMEQVSKAPDVVDDSDIGNRRDLRDQMIITIDGADAKDLDDAVTVKQLPNGNWKLGVHIADVTHYVTEGSPLDVEAQERGTSVYLVDRVIPMLPHKLSNGICSLNPQVDRFTMSCEMEIDQEGHVVNHEIFESIIKTTERMTYTDVNDILVEKDEALREKYAPIVPMLEAMQNLAEILRRKREKRGAIDFDFKEARVVVDEEGHPEAVVMRERSAGEHLIEEFMLAANETVAEHFHWMDVPFIYRIHEDPKEDKLARFFEFITNFGLIVKGTANDIHPAALQQVLEEVKGKPEEMVVSTVMLRSMQQAKYDTVSAGHFGLSTDFYTHFTSPIRRYPDLIVHRLIREYLINGDVRPETLEKRAEELPEIAEHSSKMERRAVEAERETDELKKTEFMVDKVGERFIGIISSVTNFGLFIELPTTIEGLVHVSAMKGDYFKFHQNQLAMIGERTGQIYRIGDEVEVEVTKVDVDAREIDFALRSEGKPGPVSDKQKRQREKPIDKTRNFKSSSKNNRNKRRTGKSEDVKPKTERKDDEWYTKPKKKKKKKPFYQGVAKESPKKKKRR
>NZ_LUEQ01000004.1|WP_003723350.1|76961_77426_-|SsrA-binding-protein-SmpB
MPKGDGKLVAQNKKARHDYAIEETFEAGIVLQGTEIKSVRNARVNLKDSYARIDKGEIFLHNMHISPYEQGNRYNHDPLRTRKLLLHKKQISRLIGETKESGYSIVPLKMYIKDGYAKVLIGVARGKKKYDKRQDLKQKEAKRDIERAFKERQQ
>NZ_LUEQ01000004.1|WP_061665491.1|75997_76906_+|Rgg/GadR/MutR-family-transcriptional-regulator
MQNIGDTLKFIRKSKNLTQQETCTNALSRSNYQKIENNKIMPSMDRFIQILLNFNMTLEEFEFVKRDFTPSPKENILYLYSKIITSSETDILLDVISKCDDYLANQNDIFISDIKASLEGILLAEKEHNFELAREKVAYIWDRLSEADELFWNDILILRNIFFIFENETAQHIVNRLISQLKKYRYLYPTLSIEISLHVNRATYLILDEKYELALHYIELSIKIAKHNHYYLQFCMAVAKKGIVLYKLDQKQQGKHFMQRALRVAKVLEEERILNGIKNEIDYFLHDELQDLSLNEFTKIDI
>NZ_LUEQ01000004.1|WP_061665490.1|72339_75615_-|carbohydrate-binding-protein
MKRRTRKCSLVFILGILIFSCLSGFGTNVFAMDGEYHSPYGDDDLYTVQPTERSPRDPKAGEDVILNITTWPIENGQDVWVEWTKNGVAQENVTAAYDYNSGNNTYWKADLGKFEKGDEITYTTKGSTNGGTAYESGPFTFYVTDWEYVQDVTSVVDNGDSITLNMTATAGDFSPKLYLSFEDLDTLRMELSPTGKETGHAGKSGYTVEDTAEKVTVTTEDLSIEIQKSPYRMEVHQADGTLLTSEYTTANSLGWLTDGKNVINQYQNNFMTPSDEAFYGFGERYDTINQRGKDVETYVYNEYQDQAQTERTYLAVPFFVSANKYGMYVNSDFHSQFQMASKVEDKYSFVLDNDGDMTNMLDYYVISGKDQNDIVNNYTDITGKTTLLPKWAFGLWMSANEWDRESDVSSALSNAKANDIPATGFVLEQWSDEETYYIWNNATYTAKKNGEAFSYDDFTFNGKWTDPKGMVDSVHDAGMNIVLWQVPVLKDDGTVYEQRDNDEEYMISQGYSADDGTGAPYRVPASQWFGNGILLDFTNKDAVDWWTSQREYLLTEVGIDGFKTDGGEMVWGRDTTFSNGEKGQEMRNRYPTDYVSSYFDFAKSINPEAVSFSRSGTSGAQKSGIYWSGDQTSTFDSFQASLKAGLSASTSGVSYWAWDMAGFTGDYPTAELYKRATAMAAFAPIMQFHSEKSDPSPSEERSPWNAVARTGDETILPTFQKYLYTRMNLLPYIYTAAKDTADNGKSMMRQMAMDYPEDVNARDLDEQYMFGDDLLVAPIVQEGQTEKEVYLPEGEWVDIWNGGVHPGGETISYYADVDTLPVFAKAGAIIPMNMTDGYQLGQNVGNDLKSYDNLTFRVYPSEDSEYSFYDDVNGGEMRDISVSEDFANEKVSVDLPAMADETTMQVFSTEPTSVTIDGADVAKADTLDAFNEATTGYYYDTVQNLTYVKAAAKDAKQAIILNGVNHAPYEAEFGHLTNVTTASDHAGYTGTGFVAGFDAEKEAVEFDIDAVDGASDYTMEVRYSAGVEDATRTVYINGKKQQITLPKTANWDTWNTVEVPVTLQAGNNQVVFDFEADDTAGINFDHVVIKK
>NZ_LUEQ01000004.1|WP_061665489.1|71335_72280_-|lmo2445-family-class-3-internalin
MKKIIGLTFVAICCILFAPTIKAQADTVPLPAPIIEAFPVEAIAEAIAGELDKDSVNDTITQADLDTMTAIPLPSLGLTGEDLSVLNNEVFTNAIELAIWSNNIGELPDLSEALPALENIEANGANITVFPDANYPNLTNVDLSQNNFGFNIPKFVGMEGLVSINMENAGLSGYIAEDIWMNMPNLDSLILNENHLISIPEDIFLSQQLGTHSFANQTATYPPTTIKQGENLKVFVPFIYQALDFIAPSNHDLIIIKDNGRTLYEPPYPTYDGSYMYTIETADLQPGEHLLEISLGYNSGEYTGWYDFPVTITE
>NZ_LUEQ01000004.1|WP_061665488.1|67388_71321_-|DUF5110-domain-containing-protein
MKKGMKQVCVSLAVVPLVWLNLGITQPLQVEVKAEETKKKETQKKANTETAKQLSKEEYAKLSAEEGLGNVLEATVTDNIITLKIDNGDEAEDDYLEISPLANNLLKVNLRPRNIENSPSTPMIDPNATFTAIGATIDLESDPMIISTDECTLEIDKEPARMTFKDKNGKTLLSESADGGIFDGGVRFKRGASDHVYGAYGISFSDGDLGMERDDTAADSNKTAQAGQQGNAGGPFMWSTAGYGLLVDSDGGYPYSVSDEEKLEFYYGDTIVEGRRYVKENVEMYLMSGEPEEIMSSYADITGHTPMMPKWSLGFSNFEWGTNEAEFRENINTYRAKGIPIDSFAFDYDWKFYGDPTYGGDYGEFAWNTENFPSAKDTTLKSDMDALGVKMIGITKPRVVTNLEDGTATQQGKDAEANGYWYPGQSAYEDYAFPVTVRSIDPYNADERNWWWSHSEDALDKGIVGWWNDETDKVSSNGADYWFGNFTTGFTSEAMYEGQRDYTNERVWQTGRTFYPGAQRYSTSTWSGDIGVQWKKGEVIDWANGMQEQPSTMLSTINLGQTKWGMDTGGFNANSGQVLNPDPELYSRWMEFSSLVPVFRTHGNQNQQRQPWFYGGTAEEVAKSSMTWRYSMIPYMYAYERQAYDSGVGLVQPLTFDNPTDENVVNLTDEWMFGDGLLAAPVLEEGAGSRDIYLPAGTWIDYNRGDVYEGNQTINYEVNDDDWTDVPMFVKQGAIMPMQQPQNYVGESAVKTIYLDTFASDKETSFTHYDDDGKSFDYEKDTYLKQKMTTSKTADTSTFTIGAKEGSYKADTENYIVKLHGNAAESVQVNGADSKVYDDLSALENADGSGYAVGSDVYGAVTYVKVPAQADADTVITTSGSASIVQTGTYEMETGSNFADTVADKPVAEKTYVDGYDKDGAGTTIYANVKDSGDYNVDLTYKNASSDNQALSIFVNGEYVKQTTLKPNTDWSVQSEALPLSAGKNSISYKVVTDTGDKADQVSLDKVNIGFTPTVAKVEAEEADLAGTLKVANDHWFYSGEGFVGGFGTAGDEIKFEVDVPADGEYVLNTRTANGTGMPQTLDLYTNGDYNSRVTFPSKGENWNIWSDTEKAVNLKAGTNKITFLRDGETTGNVNIDRILVSAEPINSPVQSEVNLLDNGGFERDAAATTNWVESHPDGQDKAYGVDSGSGVNPPESPAFGKQSAYFYLPGAYKQTLAQQIAVPVNNANYDVEAWVKVSNDDAAKAQMTVNNYDSSGGKTIDLVADDVWHYVTIKDVKVTTGNINTSFQMDSPGGTSIHIDNVRVMPSAE
>NZ_LUEQ01000004.1|WP_023548402.1|66020_66440_-|hypothetical-protein
MYRLLSIAFLGIAVICLLFPWMSSGIDAATFELVYEPAYKLIWMQPIIIVGYLGFLCTIFIPKFQRGKNRIVPFIGILILVLGLLNLAVRPLFGFDSFNFSIIDAYVSELVEPAFLIAVSASILSLIMYAIYLKKSENL
>NZ_LUEQ01000004.1|WP_003723344.1|65275_65845_-|YdcF-family-protein
MRSLRKIVIILIIIGFMYLLIVAAFMFSGSRTKPSENADTVLILGAKVKGNPAVPSLVLQERLDAAVAYLNEYPKAKVIVSGGQGADESATEASVMEEYLVNEGIARKRIETETKSKRTEENIKYSNAKFNLGKTVIVTSDYHMYRALMLAKRQGIDASGLPATSQTFAKYKGMMREVLSITYAWVFDH
>NZ_LUEQ01000004.1|WP_039119871.1|64334_65231_-|YafY-family-transcriptional-regulator
MKLERILAILVMILERKVLASELAEKFEVSTRTIYRDMDTLLYAGFPVVALPGKNGGFTMLDTYKLATFTFSEAEKQILLEALEARSEFMLNDSQEILREKITLLQTEKPTSKHIFFDSATQHRQQIEAEVKRKIAYIQKAFTTNKQLKITYIAMSGAETTREISPQKLNLMDGSWYLEAYCHKRAAIRHFKLTRITSLKEIDKAIMEVEETEYQPAEMKRIVLEFPENQLGKLLDYFLQEEMETGDDYVRVSFFYDLERNIIPFLLMFGSAVKILEPASLQKDYKSEVEKLYFNLNC
>NZ_LUEQ01000004.1|WP_003727926.1|80966_81200_-|preprotein-translocase-subunit-SecG
MSTVLTVLLIIVSVLLITVIILQPGKSAGLSGAISGGAEQLFGKQKARGLELILHRTTIVLSVVFFAILIALAYFVQ
>NZ_LUEQ01000004.1|WP_003732482.1|81299_82043_-|alpha/beta-fold-hydrolase
MSADRSFTLKAGNRAVLLLHGFAGTTEDVRELGEILAENGYTVHAPNFRGHGDEPAIFLKTTPEMWYEDAVAGYRQLEKDGYDEIAIVGVAMGGVFALKMAESFSPKAIVPLCANVNRKMRYIPIENYLTKQLKKQGIVEQEADQMLKNYLPEIDVMTEARATFYKNVARDIEKIHVPTMIGQGCQDEEIDADNANYIFKHIHTNDKQLCFYAGSGHDIVNDCEKDILEEDLIYFLDDLVWLEEKVV
>NZ_LUEQ01000004.1|WP_009925021.1|82225_82945_-|alpha/beta-hydrolase
MIAEINGINLFYQIIGKGEPILLIHGNGQNHRSLKRMIDDLSTNHQVIAVDSRAHGKSEAGNTPLDFEVMALDMLSLLDYLKIDKYKVIGYSDGGIVALVMGKMQPNRQIASVVIGTNYHVNQIRFLPDLFCRVAYGAAFLLAPFSRFFERMKRQLALTIYHPHMSEADLQKISAPLLAVVGEYDLISSKDTRKMVHSVQHGEMVIVRNGLHYLPRQKPKQLLQLIHSFFSNLSAEIHK
>NZ_LUEQ01000004.1|WP_003772391.1|83077_83251_-|hypothetical-protein
MLMKVKNSQASKVLETPKIKDAVVHEKSHPLAEKHSVQKKIINADMPQQQFHRRLMK
>NZ_LUEQ01000004.1|WP_003727923.1|83353_84646_-|phosphopyruvate-hydratase
MSIITEVYAREVLDSRGNPTVEVEVYTEAGAFGRALVPSGASTGEYEAVELRDGDKARYLGKGVLKAVENVNDIIADKIIGFDVTDQIGIDKAMIELDGTPNKGKLGANAILGVSLAAARAAADELGVHLYEYLGGVNGKVLPVPMMNILNGGEHADNNVDVQEFMVMPVGAPNFKEALRMGAEILHALKAVLKGKGLNTGVGDEGGFAPNLKSNEEALETIMQAIKDAGYKPGEEVKLAMDAASSEFYNRETGKYELKGEGVTRTSEEMVTWYEEMITKYPIISIEDGLDENDWDGFKLLTERIGDRVQLVGDDLFVTNTTKLKEGIEKGIANSILIKVNQIGTLTETLDAIEMAKRAGYTAVISHRSGETEDSTIADIAVATNAGQIKTGAPTRTDRVAKYNQLLRIEDNLADLAEYHGNDTFYNLKK
>NZ_LUEQ01000004.1|WP_003732483.1|84781_86314_-|2,3-bisphosphoglycerate-independent-phosphoglycerate-mutase
MSKSPVAIIILDGFGKRAETVGNAVAQANKPNFDRYWANFPHGELKAAGLDVGLPEGQMGNSEVGHTNIGAGRIVYQSLTRIDKAIEEGEFQENKALNNAFTHTKENNSDLHLFGLLSDGGVHSHINHLVALLETAKDKGVKNVYIHAFLDGRDVAPQSSLEYLETLEKAISDLNYGAIATVSGRFYAMDRDKRWERVEKAYKAIVSAEGEKFEDPIELVKASYANDKNDEFVVPAIITKDGKPVATVKDNDAVIFFNFRPDRAIQLSNAFTDKEWDHFDRGADHPKNIKFVTMTLYNPSVDAEVAFEPIEMKNVIGEVLSNEGLAQLRIAETEKYPHVTFFMNGGRNEEFPGESRILINSPKVETYDLQPEMSAYEVTDALVEDIKNDKHDAIILNFANPDMVGHSGMLEPTIKAIEAVDENLGRVVDLILEKGGSAIIFADHGNSETMSTPEGKPHTAHTTVPVPVIVTKKGVTLREGGRLADVAPTMLDLLGVKKPAEMTGESLIQK
>NZ_LUEQ01000004.1|WP_003723925.1|86315_87071_-|triose-phosphate-isomerase
MRKPIIAGNWKMNKTAAKAGQFAEDVKNNVPSSDAVESVVAAPALFLQELVRLTEGTNLRVSAQNCYFEDEGAFTGEISPFALADLGVSYVIIGHSERREYFHETDEDINKKAHAIFKHGMTPIICCGETLDQREAGQTDTWVRGQIRAALAGLTEEQVIKSVIAYEPIWAIGTGKSSTSADANETCAVIRAEVADAVSQKAADAVRIQYGGSVKPENIADYLAESDIDGALVGGASLEPASFLALLEAVK
>NZ_LUEQ01000004.1|WP_010989997.1|87116_88307_-|phosphoglycerate-kinase
MAKKVVTDLDLKDKKVLVRVDFNVPMKDGKITNDNRIVAALPTIEYILEQNGKAILFSHLGKVKTEEDKEGKSLRPVAVRLSELLGKEVKFVPTTRGPELEKAIDELKDGEVLLFENTRFEDIDGKKESKNDPELGKYWASLGDVFVNDAFGTAHRAHASNVGIASNLESAAGFLMEKEIKFIGGVVDNPARPLVAILGGAKVSDKIGVIENLLTKADKVLVGGGMTFTFMAAQGQEIGKSLLEADKVELAKGLLEKAGDKLVLPVDAVVSKEFSNDAPFHTVSADSIPADEMGLDIGQATIDLFTKELQGAKTVVWNGPMGVFELSNFAKGTIGVCEAIANLTDATTIIGGGDSAAAAMDLGFADKFTHISTGGGASLEYLEGKELPGVASISDK
>NZ_LUEQ01000004.1|WP_003732485.1|88441_89452_-|type-I-glyceraldehyde-3-phosphate-dehydrogenase
MTVKVGINGFGRIGRLAFRRIQNVEGIEVVAINDLTDAKMLAHLLKYDTTQGRFDGEVEVHDGFFKVNGKEVKVLANRNPEELPWGDLGVDIVLECTGFFTAQDKAELHIKAGAKKVVISAPATGDMKTIVYNVNHETLDGTETVISGASCTTNCLAPMAKVLEDKFGVVEGLMTTIHAYTGDQNTLDAPHPKGDFRRARAAAENIIPNTTGAAKAIGEVLPTLKGKLDGAAQRVPVPTGSLTELVTVLDKKVTVDEVNAAMEAASDPETFGYTSDQVVSSDIKGMTFGSLFDETQTKVLTVGDQQLVKTVAWYDNEMSYTAQLVRTLEYFAKIAK
>NZ_LUEQ01000004.1|WP_061665492.1|89483_90530_-|sugar-binding-transcriptional-regulator
MSDLINIQKKLLPDVLMVMQKRYQILRSIYFSEPVGRRTLAGMLGMSERVLRGEVEFLKAQGLVEIASSGMTVTKEGLVVFRDLENVMNQLSGLHSMEEQLAKKLQIKKCLVVQGDSDDTPWVREEMGRVAVEQLDMALTEKRNIVAVMGGSTMATVAEMMTTDFAKGRELLFVPGRGGIGEDLDNQANTICDKMATKTNTKHRVLYVPEQLGEEAYRSLLKEPAIQEGLRLVQSANAIILGIGDALAMAKRRHTGEDVLEKIIHRKAVGEAFGYYFDEQGEVVHKVPTFGLQFEDLAQIPHIIAVAGGTSKAKAIKSYMKSAPKNTILITDEGAAKSLLKGSNTLLK

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

96969 : 152357

Listeria_phage(30.43%)

integrase,capsid,plate,head,portal,tail,protease,terminase,holin

attL 97359:97375|attR 132977:132993

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003722598.1\|96969_97305_+	membrane protein	S5MNN8	Brevibacillus_phage	6.0e-16	76.6
97359:97375	attL	NA	NA	NA	NA
WP_009924649.1\|97629_97863_+	hypothetical protein	A8ATW9	Listeria_phage	9.2e-08	48.1
WP_031668925.1\|97891_98263_+	anti-CRISPR protein AcrIIA2	A0A059T5F6	Listeria_phage	1.6e-57	92.6
WP_061665494.1\|98267_98717_+	anti-CRISPR protein AcrIIA1	Q9T196	Listeria_phage	2.4e-76	98.0
WP_009928182.1\|98741_99239_+	AP2 domain-containing protein	A8ATW6	Listeria_phage	3.5e-89	98.2
WP_077948900.1\|99318_100173_-	N-acetylmuramoyl-L-alanine amidase	P89923	Bacillus_phage	4.0e-32	48.1
WP_061662192.1\|100172_100439_-\|holin	phage holin	A0A059T684	Listeria_phage	5.2e-39	94.3
WP_061399220.1\|100452_100836_-	hypothetical protein	NA	NA	NA	NA
WP_061399221.1\|100855_101302_-	hypothetical protein	Q9T1A3	Listeria_phage	1.9e-38	59.3
WP_061399222.1\|101309_102269_-\|plate	BppU family phage baseplate upper protein	D2IYX9	Enterococcus_phage	5.5e-06	34.5
WP_061399223.1\|102281_104108_-\|tail	phage tail protein	A0A1C8E983	Bacillus_phage	2.1e-54	31.9
WP_061399224.1\|104104_104800_-	hypothetical protein	NA	NA	NA	NA
WP_061399225.1\|104804_107738_-\|tail	phage tail tape measure protein	Q8W5Z7	Listeria_phage	9.2e-145	54.2
WP_061399226.1\|107968_108355_-	hypothetical protein	A0A2H4J956	uncultured_Caudovirales_phage	1.7e-27	48.4
WP_061399227.1\|108430_109054_-\|tail	phage tail protein	A0A2H4JGN2	uncultured_Caudovirales_phage	4.8e-35	39.1
WP_061399258.1\|109061_109391_-	HK97 gp10 family phage protein	A0A1B2APW9	Phage_Wrath	7.9e-13	39.5
WP_061399228.1\|109410_109752_-	hypothetical protein	A0A1B0T6B7	Bacillus_phage	3.7e-21	44.4
WP_061399229.1\|109741_110068_-\|head,tail	head-tail adaptor protein	A0A0N7IRA3	Lactobacillus_phage	2.5e-11	39.2
WP_061399230.1\|110045_110306_-\|head,tail	phage gp6-like head-tail connector protein	A0A1B2APX3	Phage_Wrath	1.3e-23	64.6
WP_061399231.1\|110302_111622_-\|capsid	phage major capsid protein	A0A2H4JFZ3	uncultured_Caudovirales_phage	1.2e-131	64.6
WP_061399232.1\|111618_112194_-\|head,protease	HK97 family phage prohead protease	A0A1B2APW1	Phage_Wrath	2.6e-59	61.7
WP_061399233.1\|112162_113365_-\|portal	phage portal protein	A0A2H4J9C7	uncultured_Caudovirales_phage	1.7e-129	60.7
WP_061399234.1\|113380_115132_-\|terminase	terminase large subunit	A0A2H4J222	uncultured_Caudovirales_phage	2.8e-205	59.3
WP_061399235.1\|115128_115569_-\|terminase	P27 family phage terminase small subunit	A0A1B2APW6	Phage_Wrath	1.3e-23	45.8
WP_061665495.1\|115591_115993_-	HNH endonuclease	A0A1B0T6C5	Bacillus_phage	5.8e-34	54.4
WP_061399237.1\|115992_116310_-	hypothetical protein	A0A1C8EAA0	Bacillus_phage	6.9e-06	38.5
WP_149808079.1\|116488_116983_-	hypothetical protein	A0A1S7FZ07	Listeria_phage	3.1e-29	41.7
WP_061399239.1\|117434_119309_-	DNA primase	A0A1B1P7L5	Bacillus_phage	9.5e-212	56.4
WP_061399240.1\|119301_119556_-	hypothetical protein	NA	NA	NA	NA
WP_171839782.1\|119556_121341_-	hypothetical protein	A0A2H4J041	uncultured_Caudovirales_phage	2.2e-149	47.3
WP_061399242.1\|121385_121673_+	hypothetical protein	NA	NA	NA	NA
WP_061399243.1\|121701_122190_-	DUF669 domain-containing protein	A0A1B1P7N3	Bacillus_phage	1.2e-44	56.9
WP_061399244.1\|122191_122392_-	hypothetical protein	NA	NA	NA	NA
WP_061399245.1\|122411_124286_-	AAA family ATPase	A0A1B1P7N0	Bacillus_phage	4.8e-179	63.3
WP_061399259.1\|124638_125532_-	hypothetical protein	A0A1S7FYZ0	Listeria_phage	1.4e-115	68.4
WP_061399260.1\|125546_126779_-	DEAD/DEAH box helicase	A0A1B1P7L4	Bacillus_phage	4.4e-157	65.4
WP_061399246.1\|126774_127164_-	hypothetical protein	NA	NA	NA	NA
WP_171839781.1\|127183_127351_-	hypothetical protein	NA	NA	NA	NA
WP_061399247.1\|127444_127651_-	hypothetical protein	NA	NA	NA	NA
WP_061399248.1\|127647_128211_-	DUF1642 domain-containing protein	A8ATD8	Listeria_phage	9.0e-49	51.9
WP_061399249.1\|128597_129128_-	hypothetical protein	A0A059T5F9	Listeria_phage	1.1e-85	85.2
WP_149807904.1\|129124_129355_-	hypothetical protein	NA	NA	NA	NA
WP_061399251.1\|129335_129560_-	hypothetical protein	NA	NA	NA	NA
WP_061399252.1\|129563_129806_-	hypothetical protein	A8ATD2	Listeria_phage	4.0e-38	90.0
WP_061399253.1\|129809_130019_-	hypothetical protein	NA	NA	NA	NA
WP_061399254.1\|130321_130699_+	helix-turn-helix transcriptional regulator	Q8W5Y0	Listeria_phage	1.6e-17	40.8
WP_061399255.1\|130716_131202_+	hypothetical protein	A1BTY5	Staphylococcus_virus	1.9e-18	39.8
WP_061399256.1\|131217_131676_+	hypothetical protein	A0A1B2APY6	Phage_Wrath	6.9e-23	40.1
WP_061399257.1\|131723_132878_+\|integrase	site-specific integrase	A8ATC7	Listeria_phage	1.4e-213	97.7
WP_061665497.1\|133170_134607_-	polysaccharide monooxygenase	A0A0K1Y848	Apis_mellifera_filamentous_virus	1.8e-24	37.6
132977:132993	attR	NA	NA	NA	NA
WP_003722600.1\|134763_135360_+	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	A0A223W000	Agrobacterium_phage	6.6e-58	57.4
WP_003732491.1\|135407_136799_-	amino acid permease	NA	NA	NA	NA
WP_010990000.1\|137016_138183_+	class 3 internalin InlP	NA	NA	NA	NA
WP_009924964.1\|138235_139252_-	NADPH dehydrogenase NamA	NA	NA	NA	NA
WP_003722604.1\|139278_140250_-	DNA-binding protein WhiA	Q7AWZ3	Streptococcus_phage	5.2e-52	39.4
WP_003722605.1\|140257_141226_-	YvcK family protein	A1IMD5	Streptococcus_phage	6.7e-68	43.3
WP_003722606.1\|141227_142103_-	RNase adapter RapZ	A0A0R8VB27	Thermobifida_phage	1.9e-08	29.7
WP_061665498.1\|142210_143941_-	phospho-sugar mutase	A0A1X9I671	Streptococcus_phage	3.3e-174	53.3
WP_077949474.1\|143982_145044_-	galactose mutarotase	NA	NA	NA	NA
WP_026750231.1\|145060_146044_-	UDP-glucose 4-epimerase GalE	A0A2K9L5H6	Tupanvirus	3.1e-52	38.4
WP_003732496.1\|146162_147122_-	thioredoxin-disulfide reductase	G3MA85	Bacillus_virus	2.9e-87	53.4
WP_061388353.1\|147200_148676_-	hypothetical protein	NA	NA	NA	NA
WP_003722612.1\|148761_149259_-	acyltransferase	NA	NA	NA	NA
WP_003722613.1\|149262_149916_-	pyrophosphatase PpaX	NA	NA	NA	NA
WP_003722614.1\|149959_150793_-	prolipoprotein diacylglyceryl transferase	NA	NA	NA	NA
WP_003722615.1\|150878_151817_-	HPr kinase/phosphorylase	NA	NA	NA	NA
WP_003722616.1\|152003_152357_-\|holin	phage holin family protein	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr_ID: NZ_LUEQ01000004.1|WP_061399242.1|121385_121673_+|hypothetical-protein

Click the colored protein region to show detailed information

Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_LUEQ01000004.1|WP_061399242.1|121385_121673_+|hypothetical-protein

121385_121673_+

95 aa aa

96969-152357

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_LUEQ01000001_1	Unclear	1.6\|1175913\|35\|NZ_LUEQ01000001\|CRISPRCasFinder,CRT,PILER-CR	1175913-1175947	35	117772-117806	2
NZ_LUEQ01000001_1	Unclear	1.41\|1178187\|34\|NZ_LUEQ01000001\|CRISPRCasFinder,CRT,PILER-CR	1178187-1178220	34	130475-130442	0
NZ_LUEQ01000003_1	TypeII	1.8\|405796\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	405796-405825	30	122794-122823	0
NZ_LUEQ01000003_1	TypeII	1.15\|406259\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406259-406288	30	119749-119720	0

1. spacer 1.6|1175913|35|NZ_LUEQ01000001|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LUEQ01000004 position: 117772-117806, mismatch: 2

agtgattcatctgtcatgagcttatcgacaataaa	CRISPR spacer
agtgattcatctgtcatgagcttatcaacaatgaa	Protospacer
**************************.*****.**

2. spacer 1.41|1178187|34|NZ_LUEQ01000001|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LUEQ01000004 position: 130475-130442, mismatch: 0

aaaacgtcgcaactttctccaagtctgcggcctt	CRISPR spacer
aaaacgtcgcaactttctccaagtctgcggcctt	Protospacer
**********************************

3. spacer 1.8|405796|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LUEQ01000004 position: 122794-122823, mismatch: 0

ttttccacagctttttcttgcgcatcaacg	CRISPR spacer
ttttccacagctttttcttgcgcatcaacg	Protospacer
******************************

4. spacer 1.15|406259|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LUEQ01000004 position: 119749-119720, mismatch: 0

tgatggtgagttaagaaaagtgaaaaaaga	CRISPR spacer
tgatggtgagttaagaaaagtgaaaaaaga	Protospacer
******************************

2. NZ_LUEQ01000001

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_LUEQ01000001_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LUEQ01000001_1

1175557-1178639

Unclear

I-A:NA

Consensus_repeat	Method
ATTTACATTTCATAATAAGTAGTTAAAAC	CRISPRCasFinder
ATTTACATTTCATAATAAGTAGTTAAAAC	CRT
ATTTACATTTCATAATAAGTAG---TTAAAAC	PILER-CR

47 spacers

cas2,cas1,cas3,cas5,cas7,cas8b2,cas6

The CRISPR arrays of NZ_LUEQ01000001_1

>merge|NZ_LUEQ01000001|1|1175557-1178639|CRISPRCasFinder,CRT,PILER-CR
TTTATGATTTCATAATAAGTAGTTAAAACAATTACATAAAATCACTTTGCTAATTGCATAGTTTTTATTTACATTTCATAATAAGTAGTTAAAACCTGGCAGGGATGTCAGCGAAACAATTCCAGAAAGCCATTTACATTTCATAATAAGTAGTTAAAACGATGTCTCTTGCTTGGCTGGCTCTTGAGATTTCTCTATTTACATTTCATAATAAGTAGTTAAAACGGCATTGCGATTATTTCATGTCTTGCAGGGGTAGCTTATTTACATTTCATAATAAGTAGTTAAAACATATTTGACCGTGCCCGGTAAAACTACCGCAAACGTATTTACATTTCATAATAAGTAGTTAAAACAGTGATTCATCTGTCATGAGCTTATCGACAATAAAATTTACATTTCATAATAAGTAGTTAAAACCTTGCCAAGTTTTCTGGTCCAGCTTCCCATATTTCTATTTACATTTCATAATAAGTAGTTAAAACGGAGGTCTGCCTATTGAAAAACTCGTATTATCGTAATTTACATTTCATAATAAGTAGTTAAAACACTGTTGCATAGTTGTCCATGTAGCTAATACATTCATATTTACATTTCATAATAAGTAGTTAAAACGTCGAGCAATTTAGATGGGCCTACATGATTATATTATTTACATTTCATAATAAGTAGTTAAAACTAATTGTGACAGATCGCACTTTTTCAAATAGTAATATATTTACATTTCATAATAAGTAGTTAAAACTACAAGGAATTGTAATGTCTGCTGGAACCAAACTGAATTTACATTTCATAATAAGTAGTTAAAACAAATACAATCCGTGACTCTGTATTTAATAAAATCCAAATTTACATTTCATAATAAGTAGTTAAAACACAATTACGATTTTAATGGAAGTGGGGACTTAACAAGATTTACATTTCATAATAAGTAGTTAAAACGATAGAAGGGTTATTTTACATCACAGGAGATAACAATTTACATTTCATAATAAGTAGTTAAAACAAACAGCGACAAACGTTAGCTCGTCTAGTTATTGACATTTACATTTCATAATAAGTAGTTAAAACTATAAAAAGACATTGTATAACGAAGCGATGTTTTAATTTACATTTCATAATAAGTAGTTAAAACGACGTATAACATAGGCATCACCATCGGATTTATTAAATTTACATTTCATAATAAGTAGTTAAAACATTATCAACAGACGAGTTTTTGGCAATGCTTGGTTAATTTACATTTCATAATAAGTAGTTAAAACACAGGTGACAGCAATAACAACGTGATGATACTGTTATTTACATTTCATAATAAGTAGTTAAAACCGTCAGTCCGCCACATCAAAGAATTTATGCGACAAAAATTTACATTTCATAATAAGTAGTTAAAACGAGAGTAAAAAAATGCAATCGTCAAGAGTTACGAGAAATTTACATTTCATAATAAGTAGTTAAAACCTATTGCGAGACTTTCAATTGACGGAGCTAAACAAATTTACATTTCATAATAAGTAGTTAAAACAAAAAGCCGGATACGCAAAAGCTGGAATAAAAAAATATTTACATTTCATAATAAGTAGTTAAAACTTGTGTAGGATATGTGTATGGATATGTGTATATAATATTTACATTTCATAATAAGTAGTTAAAACTTATAATCATCTTGCTCAATGTACCACCAGTCTTTCATTTACATTTCATAATAAGTAGTTAAAACAACAAACCAATACAGAAAGTAACCAAAATCAAATTATATTTACATTTCATAATAAGTAGTTAAAACGAAGGATGGTGAAGAAGTCCTTACAGATTACGAAATTTACATTTCATAATAAGTAGTTAAAACGGTAGTATTGAGTGTAGGGACTTTGGTGGTAATGGTATTTACATTTCATAATAAGTAGTTAAAACTACGTACACATTTCCATTCTGCCAATCCTTTTTAGATTTACATTTCATAATAAGTAGTTAAAACGACGATTGGACGGCTCCCTTCGGCGGGACAGAGTTCACATTTACATTTCATAATAAGTAGTTAAAACGGAATTTCTTGTAAAAAGTAACATATAATTTGAAATTTACATTTCATAATAAGTAGTTAAAACGATTTATTTGCTGGGGTAGGAGGTTTTCGCTTAGGGAATTTACATTTCATAATAAGTAGTTAAAACAGGCTTTTTCTTTTGCTCGAAAAATGACTTGCATTTATTTACATTTCATAATAAGTAGTTAAAACTCGAAGCAGAAAACGTATCTCAAATTTTTAATGGGATTTACATTTCATAATAAGTAGTTAAAACAATTTAAATGTTGGAAATGGAACTTCTGATTCAGAACATTTACATTTCATAATAAGTAGTTAAAACTAGACAAGTAATAAACGATTTCACCATCCTTGGTTTATTTACATTTCATAATAAGTAGTTAAAACTAGAAAAAGACACGAAAATCGAACGCTTAGAAAAAAATTTACATTTCATAATAAGTAGTTAAAACTTAAACATGGACACAGATAGTTTTATGGTAAGATATATATTTACATTTCATAATAAGTAGTTAAAACGTGTCTCAATGGCTGTTTATAAACGCGAAAATTACATTTACATTTCATAATAAGTAGTTAAAACAAAACGTCGCAACTTTCTCCAAGTCTGCGGCCTTATTTACATTTCATAATAAGTAGTTAAAACCTGTCAAACAAATTGAAAAAAAGACAAAAGTAAAGGAATTTACATTTCATAATAAGTAGTTAAAACTAATTCCGAGCGGTTTGCTTTCTATAGAAGAAAGATTTACATTTCATAATAAGTAGTTAAAACTTTAGCTGTGTTGTCTAATTCTACATTCTCTAAATCTATTTACATTTCATAATAAGTAGTTAAAACACTCGTCATCCCACTCAATGCCATTTCCTTCACGTATATTTACATTTCATAATAAGTAGTTAAAACTTGGGGTTGTGGTGAAGCTTCTACGGCTTTTACTTTATTTACATTTCATAATAAGTAGTTAAAACGAAAGTTTACCCACACGCAATGCGTTGTAATCCAAATTTACATTTCATAATAAGTAGTTAAAAC

>NZ_LUEQ01000001|1|1|1175557-1178639|CRISPRCasFinder
TTTATGATTTCATAATAAGTAGTTAAAAC	AATTACATAAAATCACTTTGCTAATTGCATAGTTTTT
ATTTACATTTCATAATAAGTAGTTAAAAC	CTGGCAGGGATGTCAGCGAAACAATTCCAGAAAGCC
ATTTACATTTCATAATAAGTAGTTAAAAC	GATGTCTCTTGCTTGGCTGGCTCTTGAGATTTCTCT
ATTTACATTTCATAATAAGTAGTTAAAAC	GGCATTGCGATTATTTCATGTCTTGCAGGGGTAGCTT
ATTTACATTTCATAATAAGTAGTTAAAAC	ATATTTGACCGTGCCCGGTAAAACTACCGCAAACGT
ATTTACATTTCATAATAAGTAGTTAAAAC	AGTGATTCATCTGTCATGAGCTTATCGACAATAAA
ATTTACATTTCATAATAAGTAGTTAAAAC	CTTGCCAAGTTTTCTGGTCCAGCTTCCCATATTTCT
ATTTACATTTCATAATAAGTAGTTAAAAC	GGAGGTCTGCCTATTGAAAAACTCGTATTATCGTA
ATTTACATTTCATAATAAGTAGTTAAAAC	ACTGTTGCATAGTTGTCCATGTAGCTAATACATTCAT
ATTTACATTTCATAATAAGTAGTTAAAAC	GTCGAGCAATTTAGATGGGCCTACATGATTATATT
ATTTACATTTCATAATAAGTAGTTAAAAC	TAATTGTGACAGATCGCACTTTTTCAAATAGTAATAT
ATTTACATTTCATAATAAGTAGTTAAAAC	TACAAGGAATTGTAATGTCTGCTGGAACCAAACTGA
ATTTACATTTCATAATAAGTAGTTAAAAC	AAATACAATCCGTGACTCTGTATTTAATAAAATCCAA
ATTTACATTTCATAATAAGTAGTTAAAAC	ACAATTACGATTTTAATGGAAGTGGGGACTTAACAAG
ATTTACATTTCATAATAAGTAGTTAAAAC	GATAGAAGGGTTATTTTACATCACAGGAGATAACA
ATTTACATTTCATAATAAGTAGTTAAAAC	AAACAGCGACAAACGTTAGCTCGTCTAGTTATTGAC
ATTTACATTTCATAATAAGTAGTTAAAAC	TATAAAAAGACATTGTATAACGAAGCGATGTTTTA
ATTTACATTTCATAATAAGTAGTTAAAAC	GACGTATAACATAGGCATCACCATCGGATTTATTAA
ATTTACATTTCATAATAAGTAGTTAAAAC	ATTATCAACAGACGAGTTTTTGGCAATGCTTGGTTA
ATTTACATTTCATAATAAGTAGTTAAAAC	ACAGGTGACAGCAATAACAACGTGATGATACTGTT
ATTTACATTTCATAATAAGTAGTTAAAAC	CGTCAGTCCGCCACATCAAAGAATTTATGCGACAAAA
ATTTACATTTCATAATAAGTAGTTAAAAC	GAGAGTAAAAAAATGCAATCGTCAAGAGTTACGAGAA
ATTTACATTTCATAATAAGTAGTTAAAAC	CTATTGCGAGACTTTCAATTGACGGAGCTAAACAA
ATTTACATTTCATAATAAGTAGTTAAAAC	AAAAAGCCGGATACGCAAAAGCTGGAATAAAAAAAT
ATTTACATTTCATAATAAGTAGTTAAAAC	TTGTGTAGGATATGTGTATGGATATGTGTATATAAT
ATTTACATTTCATAATAAGTAGTTAAAAC	TTATAATCATCTTGCTCAATGTACCACCAGTCTTTC
ATTTACATTTCATAATAAGTAGTTAAAAC	AACAAACCAATACAGAAAGTAACCAAAATCAAATTAT
ATTTACATTTCATAATAAGTAGTTAAAAC	GAAGGATGGTGAAGAAGTCCTTACAGATTACGAA
ATTTACATTTCATAATAAGTAGTTAAAAC	GGTAGTATTGAGTGTAGGGACTTTGGTGGTAATGGT
ATTTACATTTCATAATAAGTAGTTAAAAC	TACGTACACATTTCCATTCTGCCAATCCTTTTTAG
ATTTACATTTCATAATAAGTAGTTAAAAC	GACGATTGGACGGCTCCCTTCGGCGGGACAGAGTTCAC
ATTTACATTTCATAATAAGTAGTTAAAAC	GGAATTTCTTGTAAAAAGTAACATATAATTTGAA
ATTTACATTTCATAATAAGTAGTTAAAAC	GATTTATTTGCTGGGGTAGGAGGTTTTCGCTTAGGGA
ATTTACATTTCATAATAAGTAGTTAAAAC	AGGCTTTTTCTTTTGCTCGAAAAATGACTTGCATTT
ATTTACATTTCATAATAAGTAGTTAAAAC	TCGAAGCAGAAAACGTATCTCAAATTTTTAATGGG
ATTTACATTTCATAATAAGTAGTTAAAAC	AATTTAAATGTTGGAAATGGAACTTCTGATTCAGAAC
ATTTACATTTCATAATAAGTAGTTAAAAC	TAGACAAGTAATAAACGATTTCACCATCCTTGGTTT
ATTTACATTTCATAATAAGTAGTTAAAAC	TAGAAAAAGACACGAAAATCGAACGCTTAGAAAAAA
ATTTACATTTCATAATAAGTAGTTAAAAC	TTAAACATGGACACAGATAGTTTTATGGTAAGATATAT
ATTTACATTTCATAATAAGTAGTTAAAAC	GTGTCTCAATGGCTGTTTATAAACGCGAAAATTAC
ATTTACATTTCATAATAAGTAGTTAAAAC	AAAACGTCGCAACTTTCTCCAAGTCTGCGGCCTT
ATTTACATTTCATAATAAGTAGTTAAAAC	CTGTCAAACAAATTGAAAAAAAGACAAAAGTAAAGGA
ATTTACATTTCATAATAAGTAGTTAAAAC	TAATTCCGAGCGGTTTGCTTTCTATAGAAGAAAG
ATTTACATTTCATAATAAGTAGTTAAAAC	TTTAGCTGTGTTGTCTAATTCTACATTCTCTAAATCT
ATTTACATTTCATAATAAGTAGTTAAAAC	ACTCGTCATCCCACTCAATGCCATTTCCTTCACGTAT
ATTTACATTTCATAATAAGTAGTTAAAAC	TTGGGGTTGTGGTGAAGCTTCTACGGCTTTTACTTT
ATTTACATTTCATAATAAGTAGTTAAAAC	GAAAGTTTACCCACACGCAATGCGTTGTAATCCAA
ATTTACATTTCATAATAAGTAGTTAAAAC

>NZ_LUEQ01000001|1|1|1175557-1178639|CRT
TTTATGATTTCATAATAAGTAGTTAAAAC	AATTACATAAAATCACTTTGCTAATTGCATAGTTTTT
ATTTACATTTCATAATAAGTAGTTAAAAC	CTGGCAGGGATGTCAGCGAAACAATTCCAGAAAGCC
ATTTACATTTCATAATAAGTAGTTAAAAC	GATGTCTCTTGCTTGGCTGGCTCTTGAGATTTCTCT
ATTTACATTTCATAATAAGTAGTTAAAAC	GGCATTGCGATTATTTCATGTCTTGCAGGGGTAGCTT
ATTTACATTTCATAATAAGTAGTTAAAAC	ATATTTGACCGTGCCCGGTAAAACTACCGCAAACGT
ATTTACATTTCATAATAAGTAGTTAAAAC	AGTGATTCATCTGTCATGAGCTTATCGACAATAAA
ATTTACATTTCATAATAAGTAGTTAAAAC	CTTGCCAAGTTTTCTGGTCCAGCTTCCCATATTTCT
ATTTACATTTCATAATAAGTAGTTAAAAC	GGAGGTCTGCCTATTGAAAAACTCGTATTATCGTA
ATTTACATTTCATAATAAGTAGTTAAAAC	ACTGTTGCATAGTTGTCCATGTAGCTAATACATTCAT
ATTTACATTTCATAATAAGTAGTTAAAAC	GTCGAGCAATTTAGATGGGCCTACATGATTATATT
ATTTACATTTCATAATAAGTAGTTAAAAC	TAATTGTGACAGATCGCACTTTTTCAAATAGTAATAT
ATTTACATTTCATAATAAGTAGTTAAAAC	TACAAGGAATTGTAATGTCTGCTGGAACCAAACTGA
ATTTACATTTCATAATAAGTAGTTAAAAC	AAATACAATCCGTGACTCTGTATTTAATAAAATCCAA
ATTTACATTTCATAATAAGTAGTTAAAAC	ACAATTACGATTTTAATGGAAGTGGGGACTTAACAAG
ATTTACATTTCATAATAAGTAGTTAAAAC	GATAGAAGGGTTATTTTACATCACAGGAGATAACA
ATTTACATTTCATAATAAGTAGTTAAAAC	AAACAGCGACAAACGTTAGCTCGTCTAGTTATTGAC
ATTTACATTTCATAATAAGTAGTTAAAAC	TATAAAAAGACATTGTATAACGAAGCGATGTTTTA
ATTTACATTTCATAATAAGTAGTTAAAAC	GACGTATAACATAGGCATCACCATCGGATTTATTAA
ATTTACATTTCATAATAAGTAGTTAAAAC	ATTATCAACAGACGAGTTTTTGGCAATGCTTGGTTA
ATTTACATTTCATAATAAGTAGTTAAAAC	ACAGGTGACAGCAATAACAACGTGATGATACTGTT
ATTTACATTTCATAATAAGTAGTTAAAAC	CGTCAGTCCGCCACATCAAAGAATTTATGCGACAAAA
ATTTACATTTCATAATAAGTAGTTAAAAC	GAGAGTAAAAAAATGCAATCGTCAAGAGTTACGAGAA
ATTTACATTTCATAATAAGTAGTTAAAAC	CTATTGCGAGACTTTCAATTGACGGAGCTAAACAA
ATTTACATTTCATAATAAGTAGTTAAAAC	AAAAAGCCGGATACGCAAAAGCTGGAATAAAAAAAT
ATTTACATTTCATAATAAGTAGTTAAAAC	TTGTGTAGGATATGTGTATGGATATGTGTATATAAT
ATTTACATTTCATAATAAGTAGTTAAAAC	TTATAATCATCTTGCTCAATGTACCACCAGTCTTTC
ATTTACATTTCATAATAAGTAGTTAAAAC	AACAAACCAATACAGAAAGTAACCAAAATCAAATTAT
ATTTACATTTCATAATAAGTAGTTAAAAC	GAAGGATGGTGAAGAAGTCCTTACAGATTACGAA
ATTTACATTTCATAATAAGTAGTTAAAAC	GGTAGTATTGAGTGTAGGGACTTTGGTGGTAATGGT
ATTTACATTTCATAATAAGTAGTTAAAAC	TACGTACACATTTCCATTCTGCCAATCCTTTTTAG
ATTTACATTTCATAATAAGTAGTTAAAAC	GACGATTGGACGGCTCCCTTCGGCGGGACAGAGTTCAC
ATTTACATTTCATAATAAGTAGTTAAAAC	GGAATTTCTTGTAAAAAGTAACATATAATTTGAA
ATTTACATTTCATAATAAGTAGTTAAAAC	GATTTATTTGCTGGGGTAGGAGGTTTTCGCTTAGGGA
ATTTACATTTCATAATAAGTAGTTAAAAC	AGGCTTTTTCTTTTGCTCGAAAAATGACTTGCATTT
ATTTACATTTCATAATAAGTAGTTAAAAC	TCGAAGCAGAAAACGTATCTCAAATTTTTAATGGG
ATTTACATTTCATAATAAGTAGTTAAAAC	AATTTAAATGTTGGAAATGGAACTTCTGATTCAGAAC
ATTTACATTTCATAATAAGTAGTTAAAAC	TAGACAAGTAATAAACGATTTCACCATCCTTGGTTT
ATTTACATTTCATAATAAGTAGTTAAAAC	TAGAAAAAGACACGAAAATCGAACGCTTAGAAAAAA
ATTTACATTTCATAATAAGTAGTTAAAAC	TTAAACATGGACACAGATAGTTTTATGGTAAGATATAT
ATTTACATTTCATAATAAGTAGTTAAAAC	GTGTCTCAATGGCTGTTTATAAACGCGAAAATTAC
ATTTACATTTCATAATAAGTAGTTAAAAC	AAAACGTCGCAACTTTCTCCAAGTCTGCGGCCTT
ATTTACATTTCATAATAAGTAGTTAAAAC	CTGTCAAACAAATTGAAAAAAAGACAAAAGTAAAGGA
ATTTACATTTCATAATAAGTAGTTAAAAC	TAATTCCGAGCGGTTTGCTTTCTATAGAAGAAAG
ATTTACATTTCATAATAAGTAGTTAAAAC	TTTAGCTGTGTTGTCTAATTCTACATTCTCTAAATCT
ATTTACATTTCATAATAAGTAGTTAAAAC	ACTCGTCATCCCACTCAATGCCATTTCCTTCACGTAT
ATTTACATTTCATAATAAGTAGTTAAAAC	TTGGGGTTGTGGTGAAGCTTCTACGGCTTTTACTTT
ATTTACATTTCATAATAAGTAGTTAAAAC	GAAAGTTTACCCACACGCAATGCGTTGTAATCCAA
ATTTACATTTCATAATAAGTAGTTAAAAC

>NZ_LUEQ01000001|1|1|1175623-1178639|PILER-CR
ATTTACATTTCATAATAAGTAGTTAAAAC	CTGGCAGGGATGTCAGCGAAACAATTCCAGAAAGCC
ATTTACATTTCATAATAAGTAGTTAAAAC	GATGTCTCTTGCTTGGCTGGCTCTTGAGATTTCTCT
ATTTACATTTCATAATAAGTAGTTAAAAC	GGCATTGCGATTATTTCATGTCTTGCAGGGGTAGCTT
ATTTACATTTCATAATAAGTAGTTAAAAC	ATATTTGACCGTGCCCGGTAAAACTACCGCAAACGT
ATTTACATTTCATAATAAGTAGTTAAAAC	AGTGATTCATCTGTCATGAGCTTATCGACAATAAA
ATTTACATTTCATAATAAGTAGTTAAAAC	CTTGCCAAGTTTTCTGGTCCAGCTTCCCATATTTCT
ATTTACATTTCATAATAAGTAGTTAAAAC	GGAGGTCTGCCTATTGAAAAACTCGTATTATCGTA
ATTTACATTTCATAATAAGTAGTTAAAAC	ACTGTTGCATAGTTGTCCATGTAGCTAATACATTCAT
ATTTACATTTCATAATAAGTAGTTAAAAC	GTCGAGCAATTTAGATGGGCCTACATGATTATATT
ATTTACATTTCATAATAAGTAGTTAAAAC	TAATTGTGACAGATCGCACTTTTTCAAATAGTAATAT
ATTTACATTTCATAATAAGTAGTTAAAAC	TACAAGGAATTGTAATGTCTGCTGGAACCAAACTGA
ATTTACATTTCATAATAAGTAGTTAAAAC	AAATACAATCCGTGACTCTGTATTTAATAAAATCCAA
ATTTACATTTCATAATAAGTAGTTAAAAC	ACAATTACGATTTTAATGGAAGTGGGGACTTAACAAG
ATTTACATTTCATAATAAGTAGTTAAAAC	GATAGAAGGGTTATTTTACATCACAGGAGATAACA
ATTTACATTTCATAATAAGTAGTTAAAAC	AAACAGCGACAAACGTTAGCTCGTCTAGTTATTGAC
ATTTACATTTCATAATAAGTAGTTAAAAC	TATAAAAAGACATTGTATAACGAAGCGATGTTTTA
ATTTACATTTCATAATAAGTAGTTAAAAC	GACGTATAACATAGGCATCACCATCGGATTTATTAA
ATTTACATTTCATAATAAGTAGTTAAAAC	ATTATCAACAGACGAGTTTTTGGCAATGCTTGGTTA
ATTTACATTTCATAATAAGTAGTTAAAAC	ACAGGTGACAGCAATAACAACGTGATGATACTGTT
ATTTACATTTCATAATAAGTAGTTAAAAC	CGTCAGTCCGCCACATCAAAGAATTTATGCGACAAAA
ATTTACATTTCATAATAAGTAGTTAAAAC	GAGAGTAAAAAAATGCAATCGTCAAGAGTTACGAGAA
ATTTACATTTCATAATAAGTAGTTAAAAC	CTATTGCGAGACTTTCAATTGACGGAGCTAAACAA
ATTTACATTTCATAATAAGTAGTTAAAAC	AAAAAGCCGGATACGCAAAAGCTGGAATAAAAAAAT
ATTTACATTTCATAATAAGTAGTTAAAAC	TTGTGTAGGATATGTGTATGGATATGTGTATATAAT
ATTTACATTTCATAATAAGTAGTTAAAAC	TTATAATCATCTTGCTCAATGTACCACCAGTCTTTC
ATTTACATTTCATAATAAGTAGTTAAAAC	AACAAACCAATACAGAAAGTAACCAAAATCAAATTAT
ATTTACATTTCATAATAAGTAGTTAAAAC	GAAGGATGGTGAAGAAGTCCTTACAGATTACGAA
ATTTACATTTCATAATAAGTAGTTAAAAC	GGTAGTATTGAGTGTAGGGACTTTGGTGGTAATGGT
ATTTACATTTCATAATAAGTAGTTAAAAC	TACGTACACATTTCCATTCTGCCAATCCTTTTTAG
ATTTACATTTCATAATAAGTAGTTAAAAC	GACGATTGGACGGCTCCCTTCGGCGGGACAGAGTTCAC
ATTTACATTTCATAATAAGTAGTTAAAAC	GGAATTTCTTGTAAAAAGTAACATATAATTTGAA
ATTTACATTTCATAATAAGTAGTTAAAAC	GATTTATTTGCTGGGGTAGGAGGTTTTCGCTTAGGGA
ATTTACATTTCATAATAAGTAGTTAAAAC	AGGCTTTTTCTTTTGCTCGAAAAATGACTTGCATTT
ATTTACATTTCATAATAAGTAGTTAAAAC	TCGAAGCAGAAAACGTATCTCAAATTTTTAATGGG
ATTTACATTTCATAATAAGTAGTTAAAAC	AATTTAAATGTTGGAAATGGAACTTCTGATTCAGAAC
ATTTACATTTCATAATAAGTAGTTAAAAC	TAGACAAGTAATAAACGATTTCACCATCCTTGGTTT
ATTTACATTTCATAATAAGTAGTTAAAAC	TAGAAAAAGACACGAAAATCGAACGCTTAGAAAAAA
ATTTACATTTCATAATAAGTAGTTAAAAC	TTAAACATGGACACAGATAGTTTTATGGTAAGATATAT
ATTTACATTTCATAATAAGTAGTTAAAAC	GTGTCTCAATGGCTGTTTATAAACGCGAAAATTAC
ATTTACATTTCATAATAAGTAGTTAAAAC	AAAACGTCGCAACTTTCTCCAAGTCTGCGGCCTT
ATTTACATTTCATAATAAGTAGTTAAAAC	CTGTCAAACAAATTGAAAAAAAGACAAAAGTAAAGGA
ATTTACATTTCATAATAAGTAGTTAAAAC	TAATTCCGAGCGGTTTGCTTTCTATAGAAGAAAG
ATTTACATTTCATAATAAGTAGTTAAAAC	TTTAGCTGTGTTGTCTAATTCTACATTCTCTAAATCT
ATTTACATTTCATAATAAGTAGTTAAAAC	ACTCGTCATCCCACTCAATGCCATTTCCTTCACGTAT
ATTTACATTTCATAATAAGTAGTTAAAAC	TTGGGGTTGTGGTGAAGCTTCTACGGCTTTTACTTT
ATTTACATTTCATAATAAGTAGTTAAAAC	GAAAGTTTACCCACACGCAATGCGTTGTAATCCAA
ATTTACATTTCATAATAAGTAGTTAAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LUEQ01000001.1\|WP_003721320.1\|1165486_1166227_+\|MerR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|133381
NZ_LUEQ01000001.1\|WP_003721303.1\|1187295_1188111_+\|histidine-phosphatase-family-protein	unknown	unknown	gnl\|CDD\|223483
NZ_LUEQ01000001.1\|WP_014600555.1\|1169565_1170009_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LUEQ01000001.1\|WP_077949519.1\|1172417_1173422_-\|ROK-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224851
NZ_LUEQ01000001.1\|WP_003721310.1\|1178836_1179115_-\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_LUEQ01000001.1\|WP_061665282.1\|1182897_1183680_-\|type-I-B-CRISPR-associated-protein-Cas5	cas5	cd09658_cas5_CAS-I-B	gnl\|CDD\|273860
NZ_LUEQ01000001.1\|WP_003721318.1\|1167858_1169520_+\|SulP-family-inorganic-anion-transporter	unknown	unknown	gnl\|CDD\|223732
NZ_LUEQ01000001.1\|WP_012951252.1\|1175115_1175484_+\|DUF1304-domain-containing-protein	unknown	unknown	gnl\|CDD\|226282
NZ_LUEQ01000001.1\|WP_031674430.1\|1186220_1186943_-\|CRISPR-associated-endoribonuclease-Cas6	cas6	pfam01881_cas6_CAS-I:CAS-III	gnl\|CDD\|273848
NZ_LUEQ01000001.1\|WP_003721306.1\|1183657_1184527_-\|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	cas7	cd09687_cas7_CAS-I-B	gnl\|CDD\|274215
NZ_LUEQ01000001.1\|WP_003721316.1\|1170114_1170867_-\|MurR/RpiR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224651
NZ_LUEQ01000001.1\|WP_031644454.1\|1173552_1174968_-\|multidrug-efflux-MFS-transporter	unknown	unknown	gnl\|CDD\|129794
NZ_LUEQ01000001.1\|WP_003721315.1\|1171069_1172386_+\|6-phospho-beta-glucosidase	unknown	unknown	gnl\|CDD\|133432
NZ_LUEQ01000001.1\|WP_003721301.1\|1189708_1190140_-\|universal-stress-protein	unknown	unknown	gnl\|CDD\|366180
NZ_LUEQ01000001.1\|WP_061665281.1\|1180622_1182830_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_LUEQ01000001.1\|WP_061665279.1\|1166271_1167603_-\|DUF1254-domain-containing-protein	unknown	unknown	gnl\|CDD\|227659
NZ_LUEQ01000001.1\|WP_061665283.1\|1184516_1186205_-\|type-I-B-CRISPR-associated-protein-Cas8b1/Cst1	cas8b2	cd09754_cas8b2_CAS-I-B	gnl\|CDD\|187884
NZ_LUEQ01000001.1\|WP_014601724.1\|1179119_1180118_-\|type-I-B-CRISPR-associated-endonuclease-Cas1	cas1	cd09722_cas1_CAS-I-B	gnl\|CDD\|274695
NZ_LUEQ01000001.1\|WP_061665284.1\|1188231_1189662_+\|CapA-family-protein	unknown	unknown	gnl\|CDD\|225399
NZ_LUEQ01000001.1\|WP_003721321.1\|1163781_1165257_-\|membrane-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_LUEQ01000001.1\|WP_003721320.1\|1165486_1166227_+\|MerR-family-transcriptional-regulator	gnl\|CDD\|133381	cd01106, HTH_TipAL-Mta, Helix-Turn-Helix DNA binding domain of the transcription regulators TipAL, Mta, and SkgA. Helix-turn-helix (HTH) TipAL, Mta, and SkgA transcription regulators, and related proteins, N-terminal domain. TipAL regulates resistance to and activation by numerous cyclic thiopeptide antibiotics, such as thiostrepton. Mta is a global transcriptional regulator; the N-terminal DNA-binding domain of Mta interacts directly with the promoters of mta, bmr, blt, and ydfK, and induces transcription of these multidrug-efflux transport genes. SkgA has been shown to control stationary-phase expression of catalase-peroxidase in Caulobacter crescentus. These proteins are comprised of distinct domains that harbor an N-terminal active (DNA-binding) site and a regulatory (effector-binding) site. The conserved N-terminal domain of these transcription regulators contains winged HTH motifs that mediate DNA binding. These proteins share the N-terminal DNA binding domain with other transcription regulators of the MerR superfamily that promote transcription by reconfiguring the spacer between the -35 and -10 promoter elements. Unique to this family, is a TipAL-like, lineage specific Bacilli subgroup, which has five conserved cysteines in the C-terminus of the protein.	2.56491e-51
NZ_LUEQ01000001.1\|WP_077949519.1\|1172417_1173422_-\|ROK-family-transcriptional-regulator	gnl\|CDD\|224851	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism].	6.37886e-21
NZ_LUEQ01000001.1\|WP_003721310.1\|1178836_1179115_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	5.1393e-30
NZ_LUEQ01000001.1\|WP_061665282.1\|1182897_1183680_-\|type-I-B-CRISPR-associated-protein-Cas5	gnl\|CDD\|273860	TIGR01895, conserved_hypothetical_protein, CRISPR-associated protein Cas5, subtype I-B/TNEAP. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. This family is represented by TM1800 from Thermotoga maritima. It is related to TIGR01868 (CRISPR-associated protein, CT1976 family).	1.84912e-22
NZ_LUEQ01000001.1\|WP_003721318.1\|1167858_1169520_+\|SulP-family-inorganic-anion-transporter	gnl\|CDD\|223732	COG0659, SUL1, Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism].	3.54266e-147
NZ_LUEQ01000001.1\|WP_012951252.1\|1175115_1175484_+\|DUF1304-domain-containing-protein	gnl\|CDD\|226282	COG3759, COG3759, Predicted membrane protein [Function unknown].	8.73125e-42
NZ_LUEQ01000001.1\|WP_031674430.1\|1186220_1186943_-\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|273848	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This broadly distributed, highly divergent Cas family is now characterized as an endoribonuclease that generates guide RNAs for host defense against phage and other invaders. The family contains a C-terminal motif GXGXXXXXGXG, where the each X between two Gly is hydrophobic and the spacer XXXXX contains (usually) one Arg or Lys. The seed alignment for the current version of this model has gappy columns removed. Members of this protein family are found associated with several different CRISPR/cas system subtypes, and consequently we designate this family Cas6.	4.8751e-33
NZ_LUEQ01000001.1\|WP_003721306.1\|1183657_1184527_-\|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	gnl\|CDD\|274215	TIGR02585, conserved_protein, CRISPR-associated protein Cas7/Cst2/DevR, subtype I-B/TNEAP. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. This clade is a member of the DevR family (TIGR01875) and includes the DevR protein of Myxococcus xanthus, a protein whose expression appears to be regulated through a number of means, including both location and autorepression; DevR mutants are incapable of fruiting body development.	1.33672e-55
NZ_LUEQ01000001.1\|WP_003721316.1\|1170114_1170867_-\|MurR/RpiR-family-transcriptional-regulator	gnl\|CDD\|224651	COG1737, RpiR, Transcriptional regulators [Transcription].	5.24308e-64
NZ_LUEQ01000001.1\|WP_031644454.1\|1173552_1174968_-\|multidrug-efflux-MFS-transporter	gnl\|CDD\|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	4.42897e-80
NZ_LUEQ01000001.1\|WP_003721315.1\|1171069_1172386_+\|6-phospho-beta-glucosidase	gnl\|CDD\|133432	cd05296, GH4_P_beta_glucosidase, Glycoside Hydrolases Family 4; Phospho-beta-glucosidase. Some bacteria simultaneously translocate and phosphorylate disaccharides via the phosphoenolpyruvate-dependent phosphotransferase system (PEP-PTS). After translocation, these phospho-disaccharides may be hydrolyzed by the GH4 glycoside hydrolases such as the phospho-beta-glucosidases. Other organisms (such as archaea and Thermotoga maritima ) lack the PEP-PTS system, but have several enzymes normally associated with the PEP-PTS operon. The 6-phospho-beta-glucosidase from Thermotoga maritima hydrolylzes cellobiose 6-phosphate (6P) into glucose-6P and glucose, in an NAD+ and Mn2+ dependent fashion. The Escherichia coli 6-phospho-beta-glucosidase (also called celF) hydrolyzes a variety of phospho-beta-glucosides including cellobiose-6P, salicin-6P, arbutin-6P, and gentobiose-6P. Phospho-beta-glucosidases are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.	0
NZ_LUEQ01000001.1\|WP_003721301.1\|1189708_1190140_-\|universal-stress-protein	gnl\|CDD\|366180	pfam00582, Usp, Universal stress protein family. The universal stress protein UspA is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. UspA enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae UspA reveals an alpha/beta fold similar to that of the Methanococcus jannaschii MJ0577 protein, which binds ATP, though UspA lacks ATP-binding activity.	4.03126e-27
NZ_LUEQ01000001.1\|WP_061665281.1\|1180622_1182830_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	1.74447e-61
NZ_LUEQ01000001.1\|WP_061665279.1\|1166271_1167603_-\|DUF1254-domain-containing-protein	gnl\|CDD\|227659	COG5361, COG5361, Uncharacterized conserved protein [Function unknown].	1.13144e-73
NZ_LUEQ01000001.1\|WP_061665283.1\|1184516_1186205_-\|type-I-B-CRISPR-associated-protein-Cas8b1/Cst1	gnl\|CDD\|187884	cd09754, Cas8a1_I-A, CRISPR/Cas system-associated protein Cas8a1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins, some contain Zn-finger domain; signature gene for I-A subtype; also known as CXXC_CXXC family.	7.61548e-26
NZ_LUEQ01000001.1\|WP_014601724.1\|1179119_1180118_-\|type-I-B-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274695	TIGR03641, cas1_HMARI, CRISPR-associated endonuclease Cas1, subtype I-B/HMARI/TNEAP. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes Cas1 subgroup that includes Cas1 proteins of the related HMARI and TNEAP subtypes of CRISPR/Cas system.	3.28657e-163
NZ_LUEQ01000001.1\|WP_061665284.1\|1188231_1189662_+\|CapA-family-protein	gnl\|CDD\|225399	COG2843, PgsA, Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation) [Cell envelope biogenesis, outer membrane].	5.31901e-100
NZ_LUEQ01000001.1\|WP_003721303.1\|1187295_1188111_+\|histidine-phosphatase-family-protein	gnl\|CDD\|223483	COG0406, phoE, Broad specificity phosphatase PhoE and related phosphatases [General function prediction only].	5.01016e-50

>NZ_LUEQ01000001.1|WP_012951252.1|1175115_1175484_+|DUF1304-domain-containing-protein
MAILAFILTFIVMIEHIYIMILEMFFANTKLAAKTFGVEKELLANKKVQTLFANQGLYNGFLAAGLVWGLFFAGAGMAETVQIFFLSCVVVAALFGGATSSKGILVKQGLPAVLALVAVLLV
>NZ_LUEQ01000001.1|WP_031644454.1|1173552_1174968_-|multidrug-efflux-MFS-transporter
MQQEATGGQKIRPIPIIASFLMAGFIGLFSETALNMALSDLIQVFDISSATVQWLTTGYLLTLGILVPISGLLLQWFTTRGLFFTAVSFSIAGTLIAALSPTFAMLMIGRVVQAVGTALLLPLMFNTILLIFPEHKRGSAMGMIGLVIMFAPAVGPTISGLILENLTWNWIFWISLPFLIIALLFGMKFMQNVSVVTKPKIDILSIILSTLGFGGVVFAFSSAGESGWGSATVLVSIIVGGLALGLFVWRQLTMEKPLMDLKVFKYPMFTLGLILVFISFMMILSTMILLPLYLQNSLALAAFSAGLVLLPGGVLNGLMSPFTGRLFDAYGPRALVIPGFIVAVVALFFLTRIEVGTSALTIIVLHSVLMIGISMVMMPAQTNGLNQLPPKLYPDGTAIMNTLQQVSGAIGTAVAITIMSAGQKAYMETAQGMGPEQMVASLTAGIQNAFVFGLIMACIGLLCSLFIRKAK
>NZ_LUEQ01000001.1|WP_077949519.1|1172417_1173422_-|ROK-family-transcriptional-regulator
MAIPRDLKELNKKNIKSILRQQGGMTKAEIAEVTGLSVVTVNKLIRDLVENEEILEQDNSVATGGRRAVSYEINPNFQQVLVISLQEKWKKITYSFSVYNLLGEPEFVEDMSGEDLDITALKRNTKDLVCAFPKISCVVIGVPGIEIGGKLRAMDFPLLLNVQLRETLEAEVNLPVLVETDTNAAILGYKNRPVKEENIVGLYYPERFPPGAGLLMNGEILKGQNGLAGEIKHMPLQVDWDNFDFSVDEIKAHIRKMALLTMSFYDPETIVLYTNFYFGQKDFMEELKEELKQVYPYAVLPEIVLSRKFTTDYRIGLLAFGIDYLENNMTDWRI
>NZ_LUEQ01000001.1|WP_003721315.1|1171069_1172386_+|6-phospho-beta-glucosidase
MTKGIKIATIGGGSSYTPELIEGFIKRQDELPVRELWLVDVEAGREKLEIVGNLAKRMVKKAGVNMEIHLTLDREEALKDADFVTTQLRVGLLDARVKDERIPNSYGVVGQETNGPGGMFKGLRTIPVILDICKDMERLCPDAWLINFANPAGMVTEAVLRYSNQKKVVGLCNGPIGIERNIAETLGVDVSEIYVEFVGLNHMVFAKTVYHNGKDVTKDVVFKMTEDEAGSSLKNINATGWDKTFLRTLNMIPIDYLRYYWQTKQQLEDQARAYAEHGTRAEVVKKVEAELFELYKQEELAEKPKQLEQRGGAYYSEAACNLINSIYNDKRDIQIVNTRNNGAILDIDPDSAVETNCVITRQGPIPLASGRLPIAINGIIQEIKTFERLTAEAAVTGDYDKALLAMTINPLTPSESVAREMLDELLEAHKEYLPNFFK
>NZ_LUEQ01000001.1|WP_003721316.1|1170114_1170867_-|MurR/RpiR-family-transcriptional-regulator
MLFLDKNLELNDTELDIYNYIVANLDKVVYMRIRDLATEAHVSTTTILRFCRKFGCNGFSEFRVKLQLYLEEQKLAQIDMADETTYIDFLKRTAQPEFKAQIQNAVEILRDRELVLFAGVGSSGVIAEYGAIYFSSLFTLALHIEDPLNHPFYHLSSKLSDKICMIAISVEGENEDIIRYIHQLKAQNCKVISITNSAKSTIARLSDANIAYYINKEMYQEANITSQLPALYTIENIAREIRTQLDKEKM
>NZ_LUEQ01000001.1|WP_014600555.1|1169565_1170009_-|hypothetical-protein
MYSNMKEKVVFTLIMCSLMILCMSSYNILLENGIGTDSLMIILKAFVPFLFIGFLLDFFVVGKIANRLHALLVSEDASKFKKIIMMQLLMVTFMCVLMSTLSLIVNQGEWSHLGILILRNYFVALFLQIFIVSPFVRLISPRIFALL
>NZ_LUEQ01000001.1|WP_003721318.1|1167858_1169520_+|SulP-family-inorganic-anion-transporter
MFKHILLSLNGYKISYLRNDVISGVGVAALTIPVAMGYAQVAGLPPIYGLYASFLPVIAYVIFASSPQLIFGIDATASAITGSIILGTAGLAAGSKEAIALAPILAFFCAIFLVLFSVLKLGRFAKYISAPVLSGFISGLSVSIIMGQIPKIMGLKESGDSFFSSLGIIFGQFFQSNWISFAMGVVTVIIVITCKKVIPKIPMSLVVLVLGTMAAYFFKLDQYNVDIVGKIPVGFPSLALPDFGASSWALAIGGGLVCAIATFAGSLLPSESFAMRNKYTIDDNRELFAYGVSNFVAAFSGCSPASASVSRTAANEQFRGKTQMVSIVAATIIALIVAFLSGLLYYMPQPVLSGIVFAALVGIIDVDVLKGLFKVSRREATVWIVAALGTLLVGVIFGVLLGIFLSFINVVSRSMKTPIAILGVIEGRHGYFDLKRKSEAKPIPNVVIYRYSASLFFGNFNKFADGLKEAVQDDTKLVIFEASAIINIDTTATESMKDLLKWLDDKGIEYYFADLIDHLKTSFRKHDLGYLIDNGYTKKTVEDALDAYYAEHK
>NZ_LUEQ01000001.1|WP_061665279.1|1166271_1167603_-|DUF1254-domain-containing-protein
MATQKNLVDLATKAYIYGFPFTFNTQQIERYVTVGIGGTKQVPFNNFTHASRLAEPSDKFVSVNNDTIYSNAPIDVSAGPVVLSVPDTSGRYYVLQFVDAWSNNFAYVGKRATGTSAGKFLLTPPNWNGDVPADMIEIKFPTNVGIIIGRLACDGEADLPTVRELQEQLKITPLNEGKEVDGFPEYDRSLGKELAFFEQLRVYMAQFPPAERDLVKQESFAPIGLMEKGVSPYSNPSEELKNALIEGAKAGLANIKKATTNFKSENGWGLTQHLFDYNADFFEIGTKKSLDWVIEDREEAYIIRAVSAITALWGNHGYEAVYLMTWTDTDGNALNGKNKYTLELNPIPPVDSFWSITMYDLPEYFLCENPINRYSIGDRTPGIQYNDDGGITIVVSKDEPTDPKERANWLPAPDAEFRPMFRLYNPQQPLVDGSYHFPGFEKK
>NZ_LUEQ01000001.1|WP_003721320.1|1165486_1166227_+|MerR-family-transcriptional-regulator
MQIKELAELTGVSVRTLHHYDKIGLLVPQKDDWNGYRIYSEKDVDKLQQILFFKELDFPLKKIQQILDDPLFDKNVALDMQRHLLIEKKQRIETMLATLDLTIKNEKGEITMTNKEKFTGFDFSSNPYEEEARKLWGDKVVEKANEKVNNMSEKEQLTLKESFDAEFRHLASVRKLTPESEEAQLEIDHFFHYLNDTHGNIYSLEAFASLGEMYVNDERFTKNIDQFGDGLSQFLQEAMTIYAKNK
>NZ_LUEQ01000001.1|WP_003721321.1|1163781_1165257_-|membrane-protein
MIRKVKSISMWLWHHLTPQIFAVICVFIITIIALFMPPYIGMADNGDFFRIFSSNGLFVNNTNYDALQFGHFVKEFGIYQYFNENQVAIYSSQSIFIQMALLLNKLFWSTTVFDVRFLGGLQLALLLPAIYLLVAGLTAKMKGWPGYVVAALTVFIFADTAYTAYFNSFFSEGLILIMMLYISAGFLLLYQHKYNDYAMLGLIFVASLILITAKQQNAPIAVVIAVCGILVFFIRKNRAFRISAAATFLVIFLSGVVMYAFIPGEFVTINQYQTMTRGVLLDSENPEKSLEEMGMNSEFALLKGTNFYQKYKMIDLDSKLMEKEFYPNYNFVTVLSYYLENPKQFGKMLDLSAQNSFSIRPFEMGNFEKATGYKFKEKTHFFSAYSDVKEKFAPAKFTFLILWALVFLICYGVSAFKHFREKNIRGTLLFDLIVLLIGSGFAVILVTIVGDGEADLTKHNFLFNVCFDLTMLIGAASLLEVYLKKRGERNA
>NZ_LUEQ01000001.1|WP_003721310.1|1178836_1179115_-|CRISPR-associated-endonuclease-Cas2
MYVILIYDISIENGGAKVWRNVFKICKKYLTHVQKSVFEGEITPALLVKLRMELDKYIRDDQDSVIVFSSRQQRWLEKEFWGLTDEKTSNFF
>NZ_LUEQ01000001.1|WP_014601724.1|1179119_1180118_-|type-I-B-CRISPR-associated-endonuclease-Cas1
MNKIESYYLFSDGELKRKDNVIRLTAPDGRFKDLKVELTRDIFLFGEVTMNTKGLNYIGQLGIPVHIFNYYGFYSGSYYPRETNVSGQLLISQVEHYTDTEKRQLIACQFIEAASFNLLRNLKYYKQRGKDVSNEIDEIKFLRKSICKMNDIPSLMGIEGNIRKVYYEAWQKIINQKIDFEKRVKRPPDNMVNTLISYVNSLVYSSCLTEIYKTQLNPVISYLHSAGERRFSLCLDVAEIFKPLIADRIIFSLLNKNIITEDDFEKEANFCYMKKAARQKVLQAYDLRMKETIKHRDLGRNVSYRHLIRLECYKLVKHLMNDKEYEAFKIWW
>NZ_LUEQ01000001.1|WP_061665281.1|1180622_1182830_-|CRISPR-associated-helicase/endonuclease-Cas3
MHKYLAKSNPEETIQEHTDNLLKNYQRLKKLYSAVEIDWYLLELVCLLHDLGKMNLLFQTKLGNASGKGKEIPHGYLSVAFVPDSKLEEMGYSEDEIKVVYQAIARHHERKYDFSDSEWKKEIIKLEEQWAGFIYSQLGGNAEYSSEVEMLYFYPGSRIFEGNSAADAETFKKYVLLKGLLNRIDFAASGGIDVELENDFLMDSMEVQLSHFKAENPEADWNALQKYMMQHQNENIVVIAETGMGKTEAGLLWLGNNKGFFTLPLRAAINAIYERITKNIVTTNQAERVGLLHSETYSQYLLHEGNAEMDIDEYYTRTRQMSLPITICTLDQLFDFVFRYAGFEHKLATLSYSKVIIDEIQMYSSDLLAYLILGLSYIDKFGGKFCIMTATLPGIVTDLLLENGVDFVQPEDKFVSSRIRHSMEMVHTEIESEFIKPFFNNNRILVICNTISKAKKIYSELKEHFQGEEIHLIHSQFIKKDRSAKEDAIFKDGQKDSTKKCIWVATQVVEASLDIDFDLLFTELSDVNGLFQRMGRCYRNRALDVDTNVYVFDGGAKVCSGIGTFIDKLIFENSKTILNEHAGVLTEEKKMELVERVYSTEALRGSEFYNDLRKTINYVKAFDSYELDKADVRRRFRNINSVSVIPEEVWQDNVEEINSYFAILRKTSKEISTKEKMIARTNLAEFMVSIPDYLYKKGESVVREINRYESVIEFKCGYSDEIGIIMYEKQEDLFF
>NZ_LUEQ01000001.1|WP_061665282.1|1182897_1183680_-|type-I-B-CRISPR-associated-protein-Cas5
MLIMKAIRVRLWQDLVNFKKPTSFQLKETYPLPPYSTVIGMVHTLCGFTSYHEMKISIQGKYFSKVNDLATRYEFKNGMTYDASRHQIKVDKYGVSRGVSTVELLVDLELLLHIIPEDPSLVPIIEKAFRETIEFPSLGRREDIATIQKVEVVDVEKRQPKKSTEISDGYNAYVPISLTENNSVHFKSHESSVGRDKLLGTRYLLTEKYERVNHGTEKAPKFFRKWRKKDVIYSSRIFVSKKDVFFFDEDDYLVFIEEEE
>NZ_LUEQ01000001.1|WP_003721306.1|1183657_1184527_-|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR
MKNKGLAMTIIFQAESANYGESLGNISSLKKISRNNGDQYTYISRQAIRYNLMDQIGEKEAPVKAEGGGDKKVIQFLSEATITDFPELDFFGYLKTEKGSGGQKRSAKVRLSNAISLETFKGDLDFLTNKGQADKLNENMNIAQAEIHKSYYRYTITIDLDQIGIDGEIALDNKEKARRVKKLMDTVAFLYRDIRGRREDLKPLFVIGGVYDVKNPVFQNIVDVADNNIVIKNIKDLLTYEDIKENTRVGIIDGQFANSDEVKVELKAESVPAFFNDIKGKIDAYYESN
>NZ_LUEQ01000001.1|WP_061665283.1|1184516_1186205_-|type-I-B-CRISPR-associated-protein-Cas8b1/Cst1
MQTEIEVRADDWLINTGLTGFLNIVGKENVRIDGQSIYFTADLLEDFETKYFNFFIQEYKETLSWYKIVSYKETMEQFRIDEFASFDEVALGNLNKYMKDVVKFYLKKANYIKVFPLIDPSANVTKWLGKLNTINLTKKQKWDEVKADIIEEVKQTYTQLDLIIDFCASEKGLQYLGAKNLIYSVINKGWSGVSFLFKQTKFIDPYLDYKTTFVDPVLEYLDNDLSKAKYNCFNCNQPIKNLKLDLSFMNDVGFDTARKTAHVWDFNNDVATCPICRLIYSCVPAGFTYVYGEGMFVNDSYGVEELHRVNERMRNSILRFNKDGINSTNTYRALVESITMEHENNRRYELADIQLVRYENEHYRFNLLSKKMLHIVNDSKGILKSLIRCGYKEGNLNVNLYKEVIQHLMNNENLFTLIHKLIYYKQTSVNGLYYNMGYVSGILDINTKFLKEMEVMTNISQNQLWFVQNCGKEFKEGYVKKKSENKISGITYKLLNSLKVNDKDGFMDTLLNSYSYLSMPIPDVFIKMFSNNEAFKSVGYAFMLGVGGEKTKKEDGGNTDEK
>NZ_LUEQ01000001.1|WP_031674430.1|1186220_1186943_-|CRISPR-associated-endoribonuclease-Cas6
MRLKINCDFDSKIIPKDFQSKVVSLFKAGIMKSSPERYENLFGGNKHKQYTFSVYLPKPQNKGAEIQLNEANCIINFSTGDAETGIIFYNALISLRGSKVLFGAGNHITVKNIQIVPEKKIIGKQTILRTLSPVVSRDHNRETFKNWFYSFEDEEFEPTLKRNMLPYLMDAFGEQARYDLEKLKITPISMKKVVVYCHEIHIESSVGIFELEAEAYLQKYLVENGIGTMTGSGFGMIEQF
>NZ_LUEQ01000001.1|WP_003721303.1|1187295_1188111_+|histidine-phosphatase-family-protein
MKKNIFKLLMALCAVLLIAGCGNSTSADKKETKETKEDGTVTFYVVRHGKTMLNTTDRVQGWSDAVLTPAGEEVVKSAGKGLKDVDFSAAYSSDSGRAIQTANLILKESDKSADKEVQTDPRFREFNFGSYEGDLNENMWTDIAKSQGKTLEEWQKAGLSPKDFANSVAALDKTRVKEGENWPAEDYATIQARLKEGLTDVAKKESKNGDSNVLLVSHGLSIGALLDTIEPGYKLPAEGIKNASVTKITYKDGKFTIGDVNDLSYVEKGSK
>NZ_LUEQ01000001.1|WP_061665284.1|1188231_1189662_+|CapA-family-protein
MKKLTYVIITGLVLVFIAGAFWITNSTNQSDQKATQTEPIKKISPANVKTISSEAKKTLNSLASSGADKASISDLKQLIKELKSYPTEKNDSGVYLQNLTACLEAVKSYTTGKTDEKTLGKVYPAFLASEQKLSAIEKTNQYDWFYAAAATNQQGLKEKGVVTLTMVGDNSFGTYPETPEHLKFDNVFQKNNGNNTYVYKNCLPWFKSDDYTIINAESAFTNATKAENKKWRIKSDPTHVAFLPASGVEAANLANNHTMDYFQVGYDDTLKAFKENNIPVFNTDAPLETTIKGMKTVLLGYDCRMSQQSPAYLERIVKDVKKYKKEDTLVIVNMHWGVEYRETPTDYQTQFGHAILDAGADIIMGSHPHRLESVEKYKDKYIVYSMGDFAFGADPTLLSRMTSMFQLRFTKEDNKIVLKDISIVPTYENSDGSTTENNYQPLPVFGDDAKKIVDELNRISKPIEGGVTEYTYFDPF
>NZ_LUEQ01000001.1|WP_003721301.1|1189708_1190140_-|universal-stress-protein
MEKYHRILVAVDGSEPAKLAFEKGLELALKLDGVLGIASIVDLRAFSPNVSYDGSLEEKAELELKTSVNEYAEKARTAGVKQVETFVAKGNPKILLSTDIPAEFQADLIICGATGMNRVEKLVLGSVSSYIMAHAICDTLIAR

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Crispr_ID: NZ_LUEQ01000001_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LUEQ01000001_2

1195064-1195415

Unclear

Consensus_repeat	Method
ATTTACATTTCAAAATAAGTAA---CTAAAAC	PILER-CR
ATTTACATTTCAAAATAAGTAACTAAAAC	CRISPRCasFinder
ATTTACATTTCANAATAAGTAACTAAAAC	CRT

5 spacers

cas6,cas8b2

The CRISPR arrays of NZ_LUEQ01000001_2

>merge|NZ_LUEQ01000001|2|1195064-1195415|PILER-CR,CRISPRCasFinder,CRT
ATTTACATTTCATAATAAGTAACTAAAACAGTTTTCCCCATCCCCGAAATCGTGAAGACTGTGCCATTTACATTTCACAATAAGTAACTAAAACGAAGATCGTTTCTATGATACTTTTGATTTTACAGAATTTACATTTCAAAATAAGTAACTAAAACAAAGATTATGGCGTTAGCTTACACCACATCGCAAAATTTACATTTCAAAATAAGTAACTAAAACTTAGAAAATCTTTTTCTTTGATTCCAAATTCAGCTAAATTTACATTTCAAAATAAGTAACTAAAACGTTTTCGCTTACAGTCATCATGGCACGGACCCCGTATTTACATTTCAAAATAAGTAACTAAAAC

>NZ_LUEQ01000001|2|2|1195064-1195415|PILER-CR
ATTTACATTTCATAATAAGTAACTAAAAC	AGTTTTCCCCATCCCCGAAATCGTGAAGACTGTGCC
ATTTACATTTCACAATAAGTAACTAAAAC	GAAGATCGTTTCTATGATACTTTTGATTTTACAGA
ATTTACATTTCAAAATAAGTAACTAAAAC	AAAGATTATGGCGTTAGCTTACACCACATCGCAAA
ATTTACATTTCAAAATAAGTAACTAAAAC	TTAGAAAATCTTTTTCTTTGATTCCAAATTCAGCTAA
ATTTACATTTCAAAATAAGTAACTAAAAC	GTTTTCGCTTACAGTCATCATGGCACGGACCCCGT
ATTTACATTTCAAAATAAGTAACTAAAAC

>NZ_LUEQ01000001|2|2|1195064-1195415|CRISPRCasFinder
ATTTACATTTCATAATAAGTAACTAAAAC	AGTTTTCCCCATCCCCGAAATCGTGAAGACTGTGCC
ATTTACATTTCACAATAAGTAACTAAAAC	GAAGATCGTTTCTATGATACTTTTGATTTTACAGA
ATTTACATTTCAAAATAAGTAACTAAAAC	AAAGATTATGGCGTTAGCTTACACCACATCGCAAA
ATTTACATTTCAAAATAAGTAACTAAAAC	TTAGAAAATCTTTTTCTTTGATTCCAAATTCAGCTAA
ATTTACATTTCAAAATAAGTAACTAAAAC	GTTTTCGCTTACAGTCATCATGGCACGGACCCCGT
ATTTACATTTCAAAATAAGTAACTAAAAC

>NZ_LUEQ01000001|2|2|1195064-1195415|CRT
ATTTACATTTCATAATAAGTAACTAAAAC	AGTTTTCCCCATCCCCGAAATCGTGAAGACTGTGCC
ATTTACATTTCACAATAAGTAACTAAAAC	GAAGATCGTTTCTATGATACTTTTGATTTTACAGA
ATTTACATTTCAAAATAAGTAACTAAAAC	AAAGATTATGGCGTTAGCTTACACCACATCGCAAA
ATTTACATTTCAAAATAAGTAACTAAAAC	TTAGAAAATCTTTTTCTTTGATTCCAAATTCAGCTAA
ATTTACATTTCAAAATAAGTAACTAAAAC	GTTTTCGCTTACAGTCATCATGGCACGGACCCCGT
ATTTACATTTCAAAATAAGTAACTAAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LUEQ01000001.1\|WP_003733191.1\|1200441_1200909_-\|PTS-sugar-transporter-subunit-IIA	unknown	unknown	gnl\|CDD\|238129
NZ_LUEQ01000001.1\|WP_003721294.1\|1196727_1197999_-\|PTS-galactitol-transporter-subunit-IIC	unknown	unknown	gnl\|CDD\|226298
NZ_LUEQ01000001.1\|WP_003733190.1\|1195652_1196588_-\|ribose-phosphate-pyrophosphokinase	unknown	unknown	gnl\|CDD\|234929
NZ_LUEQ01000001.1\|WP_039175709.1\|1194093_1194672_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LUEQ01000001.1\|WP_031674430.1\|1186220_1186943_-\|CRISPR-associated-endoribonuclease-Cas6	cas6	pfam01881_cas6_CAS-I:CAS-III	gnl\|CDD\|273848
NZ_LUEQ01000001.1\|WP_003721303.1\|1187295_1188111_+\|histidine-phosphatase-family-protein	unknown	unknown	gnl\|CDD\|223483
NZ_LUEQ01000001.1\|WP_003733192.1\|1200936_1201539_-\|SIS-domain-containing-protein	unknown	unknown	gnl\|CDD\|223865
NZ_LUEQ01000001.1\|WP_003721292.1\|1198322_1199369_-\|galactitol-1-phosphate-5-dehydrogenase	unknown	unknown	gnl\|CDD\|176198
NZ_LUEQ01000001.1\|WP_061665285.1\|1190240_1192076_-\|lmo0514-family-class-1-internalin	unknown	unknown	gnl\|CDD\|380190
NZ_LUEQ01000001.1\|WP_014600545.1\|1203711_1204362_-\|transaldolase	unknown	unknown	gnl\|CDD\|223254
NZ_LUEQ01000001.1\|WP_003733187.1\|1192457_1192916_+\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|378956
NZ_LUEQ01000001.1\|WP_003721301.1\|1189708_1190140_-\|universal-stress-protein	unknown	unknown	gnl\|CDD\|366180
NZ_LUEQ01000001.1\|WP_003733193.1\|1201542_1203603_-\|BglG-family-transcription-antiterminator	unknown	unknown	gnl\|CDD\|226234
NZ_LUEQ01000001.1\|WP_061665286.1\|1198013_1198307_-\|PTS-sugar-transporter-subunit-IIB	unknown	unknown	gnl\|CDD\|99908
NZ_LUEQ01000001.1\|WP_061665283.1\|1184516_1186205_-\|type-I-B-CRISPR-associated-protein-Cas8b1/Cst1	cas8b2	cd09754_cas8b2_CAS-I-B	gnl\|CDD\|187884
NZ_LUEQ01000001.1\|WP_003721290.1\|1200026_1200425_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LUEQ01000001.1\|WP_003721297.1\|1193306_1193987_-\|type-1-glutamine-amidotransferase	unknown	unknown	gnl\|CDD\|153212
NZ_LUEQ01000001.1\|WP_061665284.1\|1188231_1189662_+\|CapA-family-protein	unknown	unknown	gnl\|CDD\|225399
NZ_LUEQ01000001.1\|WP_003721291.1\|1199365_1200016_-\|ribulose-phosphate-3-epimerase	unknown	unknown	gnl\|CDD\|223114
NZ_LUEQ01000001.1\|WP_003721298.1\|1192922_1193282_+\|Lin0512-family-protein	unknown	unknown	gnl\|CDD\|131113

Protein	Function_ID	Function_description	E-value
NZ_LUEQ01000001.1\|WP_003733191.1\|1200441_1200909_-\|PTS-sugar-transporter-subunit-IIA	gnl\|CDD\|238129	cd00211, PTS_IIA_fru, PTS_IIA, PTS system, fructose/mannitol specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIA PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation.	2.76446e-37
NZ_LUEQ01000001.1\|WP_003721294.1\|1196727_1197999_-\|PTS-galactitol-transporter-subunit-IIC	gnl\|CDD\|226298	COG3775, GatC, Phosphotransferase system, galactitol-specific IIC component [Carbohydrate transport and metabolism].	7.01085e-178
NZ_LUEQ01000001.1\|WP_003733190.1\|1195652_1196588_-\|ribose-phosphate-pyrophosphokinase	gnl\|CDD\|234929	PRK01259, PRK01259, ribose-phosphate diphosphokinase.	1.26262e-153
NZ_LUEQ01000001.1\|WP_031674430.1\|1186220_1186943_-\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|273848	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This broadly distributed, highly divergent Cas family is now characterized as an endoribonuclease that generates guide RNAs for host defense against phage and other invaders. The family contains a C-terminal motif GXGXXXXXGXG, where the each X between two Gly is hydrophobic and the spacer XXXXX contains (usually) one Arg or Lys. The seed alignment for the current version of this model has gappy columns removed. Members of this protein family are found associated with several different CRISPR/cas system subtypes, and consequently we designate this family Cas6.	4.8751e-33
NZ_LUEQ01000001.1\|WP_003721303.1\|1187295_1188111_+\|histidine-phosphatase-family-protein	gnl\|CDD\|223483	COG0406, phoE, Broad specificity phosphatase PhoE and related phosphatases [General function prediction only].	5.01016e-50
NZ_LUEQ01000001.1\|WP_003733192.1\|1200936_1201539_-\|SIS-domain-containing-protein	gnl\|CDD\|223865	COG0794, GutQ, Predicted sugar phosphate isomerase involved in capsule formation [Cell envelope biogenesis, outer membrane].	1.15952e-75
NZ_LUEQ01000001.1\|WP_003721292.1\|1198322_1199369_-\|galactitol-1-phosphate-5-dehydrogenase	gnl\|CDD\|176198	cd08236, sugar_DH, NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Horse liver alcohol dehydrogenase is a dimeric enzyme and each subunit has two domains. The NAD binding domain is in a Rossmann fold and the catalytic domain contains a zinc ion to which substrates bind. There is a cleft between the domains that closes upon formation of the ternary complex.	0
NZ_LUEQ01000001.1\|WP_061665285.1\|1190240_1192076_-\|lmo0514-family-class-1-internalin	gnl\|CDD\|380190	NF033186, internalin_K, class 1 internalin InlK. Internalins, as found in the intracellular human pathogen Listeria monocytogenes, are paralogous surface-anchored proteins with an N-terminal signal peptide, leucine-rich repeats, and a C-terminal LPXTG processing and cell surface anchoring site. Members of this family are internalin K (InlK), a virulence factor. See articles PMID:17764999. for a general discussion of internalins, and PMID:21829365, PMID:22082958, and PMID:23958637 for more information about internalin K.	8.82009e-120
NZ_LUEQ01000001.1\|WP_014600545.1\|1203711_1204362_-\|transaldolase	gnl\|CDD\|223254	COG0176, MipB, Transaldolase [Carbohydrate transport and metabolism].	2.47908e-62
NZ_LUEQ01000001.1\|WP_003733187.1\|1192457_1192916_+\|MarR-family-transcriptional-regulator	gnl\|CDD\|378956	pfam12802, MarR_2, MarR family. The Mar proteins are involved in the multiple antibiotic resistance, a non-specific resistance system. The expression of the mar operon is controlled by a repressor, MarR. A large number of compounds induce transcription of the mar operon. This is thought to be due to the compound binding to MarR, and the resulting complex stops MarR binding to the DNA. With the MarR repression lost, transcription of the operon proceeds. The structure of MarR is known and shows MarR as a dimer with each subunit containing a winged-helix DNA binding motif.	1.03599e-12
NZ_LUEQ01000001.1\|WP_003721301.1\|1189708_1190140_-\|universal-stress-protein	gnl\|CDD\|366180	pfam00582, Usp, Universal stress protein family. The universal stress protein UspA is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. UspA enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae UspA reveals an alpha/beta fold similar to that of the Methanococcus jannaschii MJ0577 protein, which binds ATP, though UspA lacks ATP-binding activity.	4.03126e-27
NZ_LUEQ01000001.1\|WP_003733193.1\|1201542_1203603_-\|BglG-family-transcription-antiterminator	gnl\|CDD\|226234	COG3711, BglG, Transcriptional antiterminator [Transcription].	3.95572e-80
NZ_LUEQ01000001.1\|WP_061665286.1\|1198013_1198307_-\|PTS-sugar-transporter-subunit-IIB	gnl\|CDD\|99908	cd05566, PTS_IIB_galactitol, PTS_IIB_galactitol: subunit IIB of enzyme II (EII) of the galactitol-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS). In this system, EII is a galactitol-specific permease with two cytoplasmic domains (IIA and IIB) and a transmembrane channel IIC domain that are expressed on three distinct polypeptide chains, in contrast to other PTS sugar transporters. The three genes encoding these subunits (gatA, gatB, and gatC) comprise the gatCBA operon. Galactitol PTS permease takes up exogenous galactitol, releasing the phosphate ester into the cytoplasm in preparation for oxidation and further metabolism via a modified glycolytic pathway called the tagatose-6-phosphate glycolytic pathway. The IIB domain fold includes a central four-stranded parallel open twisted beta-sheet flanked by alpha-helices on both sides. The seven major PTS systems with this IIB fold include galactitol, chitobiose/lichenan, ascorbate, lactose, mannitol, fructose, and a sensory system with similarity to the bacterial bgl system.	9.6998e-28
NZ_LUEQ01000001.1\|WP_061665283.1\|1184516_1186205_-\|type-I-B-CRISPR-associated-protein-Cas8b1/Cst1	gnl\|CDD\|187884	cd09754, Cas8a1_I-A, CRISPR/Cas system-associated protein Cas8a1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins, some contain Zn-finger domain; signature gene for I-A subtype; also known as CXXC_CXXC family.	7.61548e-26
NZ_LUEQ01000001.1\|WP_003721297.1\|1193306_1193987_-\|type-1-glutamine-amidotransferase	gnl\|CDD\|153212	cd01741, GATase1_1, Subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain. This group contains a subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain. GATase activity catalyses the transfer of ammonia from the amide side chain of glutamine to an acceptor substrate. Glutamine amidotransferases (GATase) includes the triad family of amidotransferases which have a conserved Cys-His-Glu catalytic triad in the glutaminase active site. In this subgroup this triad is conserved. GATase activity can be found in a range of biosynthetic enzymes, including: glutamine amidotransferase, formylglycinamide ribonucleotide, GMP synthetase , anthranilate synthase component II, glutamine-dependent carbamoyl phosphate synthase, cytidine triphosphate synthetase, gamma-glutamyl hydrolase, imidazole glycerol phosphate synthase and, cobyric acid synthase. Glutamine amidotransferase (GATase) domains can occur either as single polypeptides, as in glutamine amidotransferases, or as domains in a much larger multifunctional synthase protein, such as CPSase.	7.71833e-60
NZ_LUEQ01000001.1\|WP_061665284.1\|1188231_1189662_+\|CapA-family-protein	gnl\|CDD\|225399	COG2843, PgsA, Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation) [Cell envelope biogenesis, outer membrane].	5.31901e-100
NZ_LUEQ01000001.1\|WP_003721291.1\|1199365_1200016_-\|ribulose-phosphate-3-epimerase	gnl\|CDD\|223114	COG0036, Rpe, Pentose-5-phosphate-3-epimerase [Carbohydrate transport and metabolism].	4.74405e-108
NZ_LUEQ01000001.1\|WP_003721298.1\|1192922_1193282_+\|Lin0512-family-protein	gnl\|CDD\|131113	TIGR02058, lin0512_fam, conserved hypothetical protein. This family consists of few members, broadly distributed. It occurs so far in several Firmicutes (twice in Oceanobacillus), one Cyanobacterium, one alpha Proteobacterium, and (with a long prefix) in plants. The function is unknown. The alignment includes a perfectly conserved motif GxGxDxHG near the N-terminus. [Hypothetical proteins, Conserved].	5.62162e-67

>NZ_LUEQ01000001.1|WP_039175709.1|1194093_1194672_-|hypothetical-protein
MKKILVPILLLATILASCSSPNEKITKDTKISKTITIRADYKVPKDIKELEDDSANIVKVKFLQNKTIGKDGSTISEIEILTSYKGNLEKGSKVDISEPWYLSDGKYVAVENYIALDKGQEYTIFLGEKDKDTYPLSSMGYGKFGGSLKEDQAVLADFNILGEVQKFDFISENTEEVKNYQLIKEQVAGKYK
>NZ_LUEQ01000001.1|WP_003721297.1|1193306_1193987_-|type-1-glutamine-amidotransferase
MIIDVLQHVPHEGPGLIANWARENQHQLKIHSLFEENAHVPNDSDFLIVLGGPMGINDTAEFPWLKDERKLIKRLSEQHKPVFGVCLGAQQIAATFGSEITVNKEKEVGWFPVKRTSDKLLFFPESLNVFHWHQDTFALPTGSTRLFASEGCLNQAFLYGENIIGLQFHFEMEKAGIETILRIDEAFITPGKYVQSVEVMREKDVPEDNKQMLEAILDYLINPKTI
>NZ_LUEQ01000001.1|WP_003721298.1|1192922_1193282_+|Lin0512-family-protein
MEQILFIQTGFGVDVHGQNITKAAERAVRNAIFTNSMPGIQGLLPDGDLQNMVVNIKLALPCDADQLDEDTIRAIIPYGTVTIEKMAGGMMTTSGIFLEDKEDKNDLMYIVNASVETGY
>NZ_LUEQ01000001.1|WP_003733187.1|1192457_1192916_+|MarR-family-transcriptional-regulator
MNNEQNMNQQIALFYFGYKAFTETADLIIAKHSLKRLHHRILFFTARMPGLTINELLTFLEISKQALHQPLAELKERELLTIEQGRRDKRQRCIFLTAAGKELENELGAAQRKQMSEIFTNSADTDGMHFTEVMEGYAKNRPGAAFIKDFKE
>NZ_LUEQ01000001.1|WP_061665285.1|1190240_1192076_-|lmo0514-family-class-1-internalin
MKKVLKLFLAMICMFIMIYPSTAAHAEETNIVNIPDANLKTYLNGLLKQASDAPITKTQMNTIQTVTLSGSTYTDLTGLEEAGNLVTLSINNTNIQTLEPIKNQTSLTYLTVGGDNVKDSLFVDLNGLVNLQSLSINGSEVTHNVFKTFNKLPKLTYLYAQNSMKITDISALASLPALTTLFLQFDGIDDFKPLNDFESLKNGNLKALAAFGQNTGRTNPRITLKSGKLDYNETNQTLYLPFSMMPKPLTSFDGTVAPFSKSTSASNTYLGFNDVALPSARLSITEDGITVSGVTKEEFDNLDEIEYNARYDFPTGSYPTPPSMTSYTISSGTYDQYFDISHTLDLTADESFDYNQYDTTSEEQFLKDVHAETDDGTAVKSDFDQVVKLDVPGEYTVTLNAENAAGLKATPVTVKVTVHEKPVITSDSQISYKKETTKSVDEFLKEIHGSVTGNAALTSDFDKVVDLNTPGEYTVTLNAINDRGQKADPVTVVVTVTTSDSGHVNPVPPTPEVKPTPQEETDQTIIPEPQSETTEDSVKEDQAKDGQAKSEEKADKTSLTTKENKVEKSEKTNQPKTKALPQTGDTNKTALPIAGVMLSLAALLIFRKSKS
>NZ_LUEQ01000001.1|WP_003721301.1|1189708_1190140_-|universal-stress-protein
MEKYHRILVAVDGSEPAKLAFEKGLELALKLDGVLGIASIVDLRAFSPNVSYDGSLEEKAELELKTSVNEYAEKARTAGVKQVETFVAKGNPKILLSTDIPAEFQADLIICGATGMNRVEKLVLGSVSSYIMAHAICDTLIAR
>NZ_LUEQ01000001.1|WP_061665284.1|1188231_1189662_+|CapA-family-protein
MKKLTYVIITGLVLVFIAGAFWITNSTNQSDQKATQTEPIKKISPANVKTISSEAKKTLNSLASSGADKASISDLKQLIKELKSYPTEKNDSGVYLQNLTACLEAVKSYTTGKTDEKTLGKVYPAFLASEQKLSAIEKTNQYDWFYAAAATNQQGLKEKGVVTLTMVGDNSFGTYPETPEHLKFDNVFQKNNGNNTYVYKNCLPWFKSDDYTIINAESAFTNATKAENKKWRIKSDPTHVAFLPASGVEAANLANNHTMDYFQVGYDDTLKAFKENNIPVFNTDAPLETTIKGMKTVLLGYDCRMSQQSPAYLERIVKDVKKYKKEDTLVIVNMHWGVEYRETPTDYQTQFGHAILDAGADIIMGSHPHRLESVEKYKDKYIVYSMGDFAFGADPTLLSRMTSMFQLRFTKEDNKIVLKDISIVPTYENSDGSTTENNYQPLPVFGDDAKKIVDELNRISKPIEGGVTEYTYFDPF
>NZ_LUEQ01000001.1|WP_003721303.1|1187295_1188111_+|histidine-phosphatase-family-protein
MKKNIFKLLMALCAVLLIAGCGNSTSADKKETKETKEDGTVTFYVVRHGKTMLNTTDRVQGWSDAVLTPAGEEVVKSAGKGLKDVDFSAAYSSDSGRAIQTANLILKESDKSADKEVQTDPRFREFNFGSYEGDLNENMWTDIAKSQGKTLEEWQKAGLSPKDFANSVAALDKTRVKEGENWPAEDYATIQARLKEGLTDVAKKESKNGDSNVLLVSHGLSIGALLDTIEPGYKLPAEGIKNASVTKITYKDGKFTIGDVNDLSYVEKGSK
>NZ_LUEQ01000001.1|WP_031674430.1|1186220_1186943_-|CRISPR-associated-endoribonuclease-Cas6
MRLKINCDFDSKIIPKDFQSKVVSLFKAGIMKSSPERYENLFGGNKHKQYTFSVYLPKPQNKGAEIQLNEANCIINFSTGDAETGIIFYNALISLRGSKVLFGAGNHITVKNIQIVPEKKIIGKQTILRTLSPVVSRDHNRETFKNWFYSFEDEEFEPTLKRNMLPYLMDAFGEQARYDLEKLKITPISMKKVVVYCHEIHIESSVGIFELEAEAYLQKYLVENGIGTMTGSGFGMIEQF
>NZ_LUEQ01000001.1|WP_061665283.1|1184516_1186205_-|type-I-B-CRISPR-associated-protein-Cas8b1/Cst1
MQTEIEVRADDWLINTGLTGFLNIVGKENVRIDGQSIYFTADLLEDFETKYFNFFIQEYKETLSWYKIVSYKETMEQFRIDEFASFDEVALGNLNKYMKDVVKFYLKKANYIKVFPLIDPSANVTKWLGKLNTINLTKKQKWDEVKADIIEEVKQTYTQLDLIIDFCASEKGLQYLGAKNLIYSVINKGWSGVSFLFKQTKFIDPYLDYKTTFVDPVLEYLDNDLSKAKYNCFNCNQPIKNLKLDLSFMNDVGFDTARKTAHVWDFNNDVATCPICRLIYSCVPAGFTYVYGEGMFVNDSYGVEELHRVNERMRNSILRFNKDGINSTNTYRALVESITMEHENNRRYELADIQLVRYENEHYRFNLLSKKMLHIVNDSKGILKSLIRCGYKEGNLNVNLYKEVIQHLMNNENLFTLIHKLIYYKQTSVNGLYYNMGYVSGILDINTKFLKEMEVMTNISQNQLWFVQNCGKEFKEGYVKKKSENKISGITYKLLNSLKVNDKDGFMDTLLNSYSYLSMPIPDVFIKMFSNNEAFKSVGYAFMLGVGGEKTKKEDGGNTDEK
>NZ_LUEQ01000001.1|WP_003733190.1|1195652_1196588_-|ribose-phosphate-pyrophosphokinase
MAGKMKLFSVTSERPLATKIADYLDIPLCEVELQKFSDGEVKINIEESIRGTNAYVVQSMNSNVNERLMELLIMVDALKRASVHSINIIMPYYGYARQDRKARSREPITAKLMANLIQRAGANRLITVDLHAAQIQGFFNIPIDHLSAIPLIGDYLIENYGEKDVVVVAPDHSGVVRARRIADRLNAPIAILNRKPRPHEDEIMSVIGDVKGKVAIVVDDIIDTGVRATTSADILLEKGAVEVIACATHSVMAGNATERLQNSNIKEVITSDSIDLPEDKQFDKLTTISIGRILGRAIEGVQENRSLHPLF
>NZ_LUEQ01000001.1|WP_003721294.1|1196727_1197999_-|PTS-galactitol-transporter-subunit-IIC
MDIILDFFKYIIGLGVTVMMPIIITILGVIFRKKISVAFKAGLTVGVGFVGLGVITSLMLTTITPVTKALVENYNFKLTATDIGWGVGSSLAWGTEVVPFVFVAIIATNILMIAFKWTKTMDVDIWNYWQPLFIASALYLTTGSMIIAVLSSIINMAIIFKIADWTQKDVEDVLGLEGISLPQIQTTGWALVGYPMNWLLGKIPGVRKINWSTEKVQSRLGIFGEPMLMGLIIGGGLAAIAQMPLSQVLQTGVTIAASLVLIPRMVSLLMDGLTVISEAAHEFMEKRFPGRELFIGLDSAVGIGHPFVLSLGLLMIPITLILAFILPGNKVLPLADLTALPFYMIFAIVPSKGNLFRGIFTGIVIVIITLYLSGAAAPLMTELAGQIGYNIPKDAVEVTSLAVGTQWYTWIVYYGLHWFGGIL
>NZ_LUEQ01000001.1|WP_061665286.1|1198013_1198307_-|PTS-sugar-transporter-subunit-IIB
MKKKRIYVCCGTGIATSTVISKKVRAVLDENRIPYEISQCTVQEVASKVSTSKPDIIVSSTTVTGDVGDVPVVIGRSFLTGLKKQETIDEILAILQD
>NZ_LUEQ01000001.1|WP_003721292.1|1198322_1199369_-|galactitol-1-phosphate-5-dehydrogenase
MKALKLYGKRDLRYEEADMPTIEEPDDVILKVKTVGICGSDISRYSKLGPYVPGMVWGHEFSGEVIEVGSEVTDIEIGDRAAGCPALYCGECEYCKKGEFARCRKLTVIGARHPGAYAEYIKLPAENVVKIPDELDYEAAALVEPSAVVVHGFYHTKLQAGDDVVVVGSGNIGLLAIQWAKVFGARRVIAIDVDDKKLALAKEVGADVVINSLKEDPLEVVAAHTDGLNADLVVEAAGSPITSAQVFAYAKKGGGVVFLGIPYADVTIERFYFEKIVRSELTVWGSWNAISAPFPGKEWQTTIHFLANKQINIEPMITHRLSLAEGPEVFERIYERNEFFGKVLFFPE
>NZ_LUEQ01000001.1|WP_003721291.1|1199365_1200016_-|ribulose-phosphate-3-epimerase
MAKIVPSVFGADIGRINEQLQVLEKNDIDLLHVDMMDGSFVPNIAFGPDQIKMMKKGTKLQFDVHMMVYEPDRYIPRLVEAGAHMITVHQEATTHLHRTIQLIKSYGVRAGVVLNPGTPPSTLEYVLDDIDCILLMTVNPGLGGQKFFQSSLEKIRKTKAYIGNRPIQIEVDGGVNDELAKECTLAGADLIVVGSYLFEGDIEANLEKLAKGVLTE
>NZ_LUEQ01000001.1|WP_003721290.1|1200026_1200425_-|hypothetical-protein
MGSFFASFVDWLIGSPGRFVVNLIEDNMLIFMVVVMIYATTILYAKWTLAYYLPKKMSQLAEMKTWELDELYAAWQTEKKALPWYILVPSRNEFWVKSARNAPESTKLLHFSQQKLKLSDKEKLQKIIEIQS
>NZ_LUEQ01000001.1|WP_003733191.1|1200441_1200909_-|PTS-sugar-transporter-subunit-IIA
MDVLEYFKEEMVRFSNEQNKEKLLAEMAEQLCEVGAVKPSYKDAVIKREKVFPTGLLTAHAGVAIPHTDSEHVIRPVVAVRILKKPVSFIEMASDNEAIDVRIVFMMALRSADEQLDMLQTLIQLIQDEEVMTTLLKAQETGDVLSAIEHFSKNN
>NZ_LUEQ01000001.1|WP_003733192.1|1200936_1201539_-|SIS-domain-containing-protein
MDKQAILNNIHQTWQEEANAISRLPEVTSEEALVKTVEKIAECTGKIVVAGCGTSGVAAKKLVHSFNCIERPAVFLTPSDAVHGTLGVLQKEDILILISKGGNTGELLNLIPACKTKGSTLIGVTENPDSVIAKEADIFFPVSVSKEPDPFNMLATASTMAVIASFDAVIVCLMTYMNYTKEQFSVIHPGGAVGNKLLNK
>NZ_LUEQ01000001.1|WP_003733193.1|1201542_1203603_-|BglG-family-transcription-antiterminator
MYLDNRSKTLFQEVIKNPNITNKQLEVKYKLSRYQISYSFQKVNEWLKWKNYPEVKRSKNGRFILEPELTALFSEKETRDPSVEYLPSENERANLILLMLLTSKEELSLAHFTTKIQVSKNTILRDLKVAQKLLPKETTVTYSRASGYQLAGSEWELRKVLTQVVSSVKEMFRGEHYFLSYSGIEKVQLMEIRRTLEEAEAMMQIKFTYEQIELLPYLLSVMFLRIRDRRLIDTAFHIDEKSLSDTREYHITDILLEKTGPVPEQERLFITLQLLTTNIFSGEILTEKLTEDLEKVVLTCLDLFEKKALVSLKNKHILIEKLLLHLKPAYYRIKYQMNLEDTLYEKFNQEFEALNFIVKEAFDPLAKFIGREIPAGEIFFISLFIGSDMIPQNDIYHKQKRAIVLCPSGVTFSKIMENILVKLFPEIHFYPTISVREYAFFKAEVDIVFSSIPLKDGENVFVVQPFMNDIEKTQLRQHVLQNLFGMGNQLTSIDKIMEVVERNADIKDPNAIRDGIIDILSANTATDENKRVKKVYLHDLITEDNIMICEDVKNYQEAIRLASQPLLLQQAITANYVKTMIDNHKFHDPYIIIGEDIAIPHAMPNAGVNRLAMSLLVVKNGVYFSETEQVHFVIVIAPVDKEQHIEALYQIVHLAENHQILDDLLENVTKEKIMQTINQLVIREDE
>NZ_LUEQ01000001.1|WP_014600545.1|1203711_1204362_-|transaldolase
MHLDSANLDDVKKIQASSIFKGITTNPSILVKEKCNRQTAINRILELTDKQVFVQTVGFTYEEILADARMLLTMFGKDKIAIKIPAHEAGTNVIDTLKKEDKTIQILGTAIYSADQAITAALAGADFVAPYVNRMSAANIDPFKEITQMRHFFDKKALKTQIMAASFKHSGQVMQAYESGADTVTIPYEIYSQMTNKVLAVEAIRVFNEDAVLYEK

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Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_LUEQ01000001_1	1.1\|1175586\|37\|NZ_LUEQ01000001\|CRISPRCasFinder,CRT	1175586-1175622	37	NZ_LUEQ01000011.1	27690-27726	1	0.973
NZ_LUEQ01000001_1	1.6\|1175913\|35\|NZ_LUEQ01000001\|CRISPRCasFinder,CRT,PILER-CR	1175913-1175947	35	NZ_LUEQ01000004.1	117772-117806	2	0.943
NZ_LUEQ01000001_1	1.33\|1177665\|37\|NZ_LUEQ01000001\|CRISPRCasFinder,CRT,PILER-CR	1177665-1177701	37	NZ_LUEQ01000011.1	44892-44928	0	1.0
NZ_LUEQ01000001_1	1.36\|1177860\|37\|NZ_LUEQ01000001\|CRISPRCasFinder,CRT,PILER-CR	1177860-1177896	37	NZ_LUEQ01000003.1	16999-17035	0	1.0
NZ_LUEQ01000001_1	1.41\|1178187\|34\|NZ_LUEQ01000001\|CRISPRCasFinder,CRT,PILER-CR	1178187-1178220	34	NZ_LUEQ01000004.1	130442-130475	0	1.0

1. spacer 1.1|1175586|37|NZ_LUEQ01000001|CRISPRCasFinder,CRT matches to position: 27690-27726, mismatch: 1, identity: 0.973

aattacataaaatcactttgctaattgcatagttttt	CRISPR spacer
aattacataaaattactttgctaattgcatagttttt	Protospacer
*************.***********************

2. spacer 1.6|1175913|35|NZ_LUEQ01000001|CRISPRCasFinder,CRT,PILER-CR matches to position: 117772-117806, mismatch: 2, identity: 0.943

agtgattcatctgtcatgagcttatcgacaataaa	CRISPR spacer
agtgattcatctgtcatgagcttatcaacaatgaa	Protospacer
**************************.*****.**

3. spacer 1.33|1177665|37|NZ_LUEQ01000001|CRISPRCasFinder,CRT,PILER-CR matches to position: 44892-44928, mismatch: 0, identity: 1.0

gatttatttgctggggtaggaggttttcgcttaggga	CRISPR spacer
gatttatttgctggggtaggaggttttcgcttaggga	Protospacer
*************************************

4. spacer 1.36|1177860|37|NZ_LUEQ01000001|CRISPRCasFinder,CRT,PILER-CR matches to position: 16999-17035, mismatch: 0, identity: 1.0

aatttaaatgttggaaatggaacttctgattcagaac	CRISPR spacer
aatttaaatgttggaaatggaacttctgattcagaac	Protospacer
*************************************

5. spacer 1.41|1178187|34|NZ_LUEQ01000001|CRISPRCasFinder,CRT,PILER-CR matches to position: 130442-130475, mismatch: 0, identity: 1.0

aaaacgtcgcaactttctccaagtctgcggcctt	CRISPR spacer
aaaacgtcgcaactttctccaagtctgcggcctt	Protospacer
**********************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_LUEQ01000001_1	1.3\|1175717\|36\|NZ_LUEQ01000001\|CRISPRCasFinder,CRT,PILER-CR	1175717-1175752	36	MH299806	Listeria phage LP-KV022, complete genome	37748-37783	0	1.0
NZ_LUEQ01000001_1	1.3\|1175717\|36\|NZ_LUEQ01000001\|CRISPRCasFinder,CRT,PILER-CR	1175717-1175752	36	MN114083	Listeria phage LP-013, complete genome	32794-32829	0	1.0
NZ_LUEQ01000001_1	1.3\|1175717\|36\|NZ_LUEQ01000001\|CRISPRCasFinder,CRT,PILER-CR	1175717-1175752	36	NC_021785	Listeria phage LP-110, complete genome	60594-60629	0	1.0
NZ_LUEQ01000001_1	1.3\|1175717\|36\|NZ_LUEQ01000001\|CRISPRCasFinder,CRT,PILER-CR	1175717-1175752	36	MN128593	Listeria phage LP-031, complete genome	32757-32792	0	1.0
NZ_LUEQ01000001_1	1.3\|1175717\|36\|NZ_LUEQ01000001\|CRISPRCasFinder,CRT,PILER-CR	1175717-1175752	36	JX442241	Listeria phage P70, complete genome	39110-39145	0	1.0
NZ_LUEQ01000001_1	1.3\|1175717\|36\|NZ_LUEQ01000001\|CRISPRCasFinder,CRT,PILER-CR	1175717-1175752	36	KJ094021	Listeria phage LP-114, complete genome	22470-22505	0	1.0
NZ_LUEQ01000001_1	1.3\|1175717\|36\|NZ_LUEQ01000001\|CRISPRCasFinder,CRT,PILER-CR	1175717-1175752	36	MN114082	Listeria phage LP-010, complete genome	32795-32830	0	1.0
NZ_LUEQ01000001_1	1.8\|1176042\|35\|NZ_LUEQ01000001\|CRISPRCasFinder,CRT,PILER-CR	1176042-1176076	35	MH341452	Listeria phage PSU-VKH-LP040, complete genome	36072-36106	0	1.0
NZ_LUEQ01000001_1	1.21\|1176886\|37\|NZ_LUEQ01000001\|CRISPRCasFinder,CRT,PILER-CR	1176886-1176922	37	MH299806	Listeria phage LP-KV022, complete genome	50264-50300	0	1.0
NZ_LUEQ01000001_1	1.21\|1176886\|37\|NZ_LUEQ01000001\|CRISPRCasFinder,CRT,PILER-CR	1176886-1176922	37	MN114083	Listeria phage LP-013, complete genome	45785-45821	0	1.0
NZ_LUEQ01000001_1	1.21\|1176886\|37\|NZ_LUEQ01000001\|CRISPRCasFinder,CRT,PILER-CR	1176886-1176922	37	NC_021785	Listeria phage LP-110, complete genome	7982-8018	0	1.0
NZ_LUEQ01000001_1	1.21\|1176886\|37\|NZ_LUEQ01000001\|CRISPRCasFinder,CRT,PILER-CR	1176886-1176922	37	MN128593	Listeria phage LP-031, complete genome	45080-45116	0	1.0
NZ_LUEQ01000001_1	1.21\|1176886\|37\|NZ_LUEQ01000001\|CRISPRCasFinder,CRT,PILER-CR	1176886-1176922	37	MN904502	Listeria phage LP-018, complete genome	45239-45275	0	1.0
NZ_LUEQ01000001_1	1.21\|1176886\|37\|NZ_LUEQ01000001\|CRISPRCasFinder,CRT,PILER-CR	1176886-1176922	37	KJ094021	Listeria phage LP-114, complete genome	35521-35557	0	1.0
NZ_LUEQ01000001_1	1.21\|1176886\|37\|NZ_LUEQ01000001\|CRISPRCasFinder,CRT,PILER-CR	1176886-1176922	37	MN114082	Listeria phage LP-010, complete genome	45070-45106	0	1.0
NZ_LUEQ01000001_1	1.47\|1178576\|35\|NZ_LUEQ01000001\|CRISPRCasFinder,CRT,PILER-CR	1178576-1178610	35	NZ_CP011399	Listeria monocytogenes strain CFSAN008100 plasmid pCFSAN008100, complete sequence	1369-1403	0	1.0
NZ_LUEQ01000001_1	1.47\|1178576\|35\|NZ_LUEQ01000001\|CRISPRCasFinder,CRT,PILER-CR	1178576-1178610	35	KJ094023	Listeria phage LP-101, complete genome	17202-17236	0	1.0
NZ_LUEQ01000001_2	2.2\|1195158\|35\|NZ_LUEQ01000001\|PILER-CR,CRISPRCasFinder,CRT	1195158-1195192	35	DQ003642	Listeria phage A006, complete genome	5993-6027	0	1.0
NZ_LUEQ01000001_2	2.4\|1195286\|37\|NZ_LUEQ01000001\|PILER-CR,CRISPRCasFinder,CRT	1195286-1195322	37	MH299806	Listeria phage LP-KV022, complete genome	28800-28836	0	1.0
NZ_LUEQ01000001_2	2.4\|1195286\|37\|NZ_LUEQ01000001\|PILER-CR,CRISPRCasFinder,CRT	1195286-1195322	37	JB137888	Sequence 7 from Patent WO2012159774	24821-24857	0	1.0
NZ_LUEQ01000001_2	2.4\|1195286\|37\|NZ_LUEQ01000001\|PILER-CR,CRISPRCasFinder,CRT	1195286-1195322	37	KJ094025	Listeria phage LP-032 contig 2, partial genome	13673-13709	0	1.0
NZ_LUEQ01000001_2	2.4\|1195286\|37\|NZ_LUEQ01000001\|PILER-CR,CRISPRCasFinder,CRT	1195286-1195322	37	MN114083	Listeria phage LP-013, complete genome	23846-23882	0	1.0
NZ_LUEQ01000001_2	2.4\|1195286\|37\|NZ_LUEQ01000001\|PILER-CR,CRISPRCasFinder,CRT	1195286-1195322	37	NC_021785	Listeria phage LP-110, complete genome	51646-51682	0	1.0
NZ_LUEQ01000001_2	2.4\|1195286\|37\|NZ_LUEQ01000001\|PILER-CR,CRISPRCasFinder,CRT	1195286-1195322	37	MN128593	Listeria phage LP-031, complete genome	23809-23845	0	1.0
NZ_LUEQ01000001_2	2.4\|1195286\|37\|NZ_LUEQ01000001\|PILER-CR,CRISPRCasFinder,CRT	1195286-1195322	37	NC_021787	Listeria phage LP-037, complete genome	46223-46259	0	1.0
NZ_LUEQ01000001_2	2.4\|1195286\|37\|NZ_LUEQ01000001\|PILER-CR,CRISPRCasFinder,CRT	1195286-1195322	37	MN904502	Listeria phage LP-018, complete genome	23309-23345	0	1.0
NZ_LUEQ01000001_2	2.4\|1195286\|37\|NZ_LUEQ01000001\|PILER-CR,CRISPRCasFinder,CRT	1195286-1195322	37	JX442241	Listeria phage P70, complete genome	29374-29410	0	1.0
NZ_LUEQ01000001_2	2.4\|1195286\|37\|NZ_LUEQ01000001\|PILER-CR,CRISPRCasFinder,CRT	1195286-1195322	37	KJ094020	Listeria phage LP-026, complete genome	6313-6349	0	1.0
NZ_LUEQ01000001_2	2.4\|1195286\|37\|NZ_LUEQ01000001\|PILER-CR,CRISPRCasFinder,CRT	1195286-1195322	37	KJ094021	Listeria phage LP-114, complete genome	12737-12773	0	1.0
NZ_LUEQ01000001_2	2.4\|1195286\|37\|NZ_LUEQ01000001\|PILER-CR,CRISPRCasFinder,CRT	1195286-1195322	37	MN114082	Listeria phage LP-010, complete genome	23847-23883	0	1.0
NZ_LUEQ01000001_1	1.3\|1175717\|36\|NZ_LUEQ01000001\|CRISPRCasFinder,CRT,PILER-CR	1175717-1175752	36	JB137888	Sequence 7 from Patent WO2012159774	15092-15127	1	0.972
NZ_LUEQ01000001_1	1.3\|1175717\|36\|NZ_LUEQ01000001\|CRISPRCasFinder,CRT,PILER-CR	1175717-1175752	36	KJ094025	Listeria phage LP-032 contig 2, partial genome	4732-4767	1	0.972
NZ_LUEQ01000001_1	1.3\|1175717\|36\|NZ_LUEQ01000001\|CRISPRCasFinder,CRT,PILER-CR	1175717-1175752	36	NC_021787	Listeria phage LP-037, complete genome	55165-55200	1	0.972
NZ_LUEQ01000001_1	1.3\|1175717\|36\|NZ_LUEQ01000001\|CRISPRCasFinder,CRT,PILER-CR	1175717-1175752	36	MN904502	Listeria phage LP-018, complete genome	32251-32286	1	0.972
NZ_LUEQ01000001_1	1.3\|1175717\|36\|NZ_LUEQ01000001\|CRISPRCasFinder,CRT,PILER-CR	1175717-1175752	36	KJ094020	Listeria phage LP-026, complete genome	15255-15290	1	0.972
NZ_LUEQ01000001_1	1.5\|1175848\|36\|NZ_LUEQ01000001\|CRISPRCasFinder,CRT,PILER-CR	1175848-1175883	36	NC_021539	Listeria phage LP-030-2, complete genome	14044-14079	1	0.972
NZ_LUEQ01000001_1	1.5\|1175848\|36\|NZ_LUEQ01000001\|CRISPRCasFinder,CRT,PILER-CR	1175848-1175883	36	AJ312240	Bacteriophage PSA complete genome	14022-14057	1	0.972
NZ_LUEQ01000001_2	2.1\|1195093\|36\|NZ_LUEQ01000001\|PILER-CR,CRISPRCasFinder,CRT	1195093-1195128	36	DQ003642	Listeria phage A006, complete genome	19078-19113	1	0.972
NZ_LUEQ01000001_2	2.2\|1195158\|35\|NZ_LUEQ01000001\|PILER-CR,CRISPRCasFinder,CRT	1195158-1195192	35	MH341451	Listeria phage PSU-VKH-LP019, complete genome	5984-6018	1	0.971
NZ_LUEQ01000001_2	2.2\|1195158\|35\|NZ_LUEQ01000001\|PILER-CR,CRISPRCasFinder,CRT	1195158-1195192	35	KP399677	Listeria phage vB_LmoS_188, complete genome	5993-6027	1	0.971
NZ_LUEQ01000001_1	1.8\|1176042\|35\|NZ_LUEQ01000001\|CRISPRCasFinder,CRT,PILER-CR	1176042-1176076	35	JB137888	Sequence 7 from Patent WO2012159774	64818-64852	2	0.943
NZ_LUEQ01000001_1	1.8\|1176042\|35\|NZ_LUEQ01000001\|CRISPRCasFinder,CRT,PILER-CR	1176042-1176076	35	NC_009812	Listeria phage B025, complete genome	32443-32477	2	0.943
NZ_LUEQ01000001_1	1.8\|1176042\|35\|NZ_LUEQ01000001\|CRISPRCasFinder,CRT,PILER-CR	1176042-1176076	35	KJ094023	Listeria phage LP-101, complete genome	32253-32287	2	0.943
NZ_LUEQ01000001_1	1.21\|1176886\|37\|NZ_LUEQ01000001\|CRISPRCasFinder,CRT,PILER-CR	1176886-1176922	37	JB137888	Sequence 7 from Patent WO2012159774	3047-3083	2	0.946
NZ_LUEQ01000001_1	1.27\|1177277\|37\|NZ_LUEQ01000001\|CRISPRCasFinder,CRT,PILER-CR	1177277-1177313	37	MH299806	Listeria phage LP-KV022, complete genome	50000-50036	2	0.946
NZ_LUEQ01000001_1	1.27\|1177277\|37\|NZ_LUEQ01000001\|CRISPRCasFinder,CRT,PILER-CR	1177277-1177313	37	MN114083	Listeria phage LP-013, complete genome	45521-45557	2	0.946
NZ_LUEQ01000001_1	1.27\|1177277\|37\|NZ_LUEQ01000001\|CRISPRCasFinder,CRT,PILER-CR	1177277-1177313	37	NC_021785	Listeria phage LP-110, complete genome	7718-7754	2	0.946
NZ_LUEQ01000001_1	1.27\|1177277\|37\|NZ_LUEQ01000001\|CRISPRCasFinder,CRT,PILER-CR	1177277-1177313	37	MN128593	Listeria phage LP-031, complete genome	44816-44852	2	0.946
NZ_LUEQ01000001_1	1.27\|1177277\|37\|NZ_LUEQ01000001\|CRISPRCasFinder,CRT,PILER-CR	1177277-1177313	37	NC_021787	Listeria phage LP-037, complete genome	2184-2220	2	0.946
NZ_LUEQ01000001_1	1.27\|1177277\|37\|NZ_LUEQ01000001\|CRISPRCasFinder,CRT,PILER-CR	1177277-1177313	37	MN904502	Listeria phage LP-018, complete genome	44975-45011	2	0.946
NZ_LUEQ01000001_1	1.27\|1177277\|37\|NZ_LUEQ01000001\|CRISPRCasFinder,CRT,PILER-CR	1177277-1177313	37	JX442241	Listeria phage P70, complete genome	51435-51471	2	0.946
NZ_LUEQ01000001_1	1.27\|1177277\|37\|NZ_LUEQ01000001\|CRISPRCasFinder,CRT,PILER-CR	1177277-1177313	37	KJ094021	Listeria phage LP-114, complete genome	35257-35293	2	0.946
NZ_LUEQ01000001_1	1.27\|1177277\|37\|NZ_LUEQ01000001\|CRISPRCasFinder,CRT,PILER-CR	1177277-1177313	37	MN114082	Listeria phage LP-010, complete genome	44806-44842	2	0.946
NZ_LUEQ01000001_1	1.29\|1177406\|36\|NZ_LUEQ01000001\|CRISPRCasFinder,CRT,PILER-CR	1177406-1177441	36	MN114083	Listeria phage LP-013, complete genome	47790-47825	2	0.944
NZ_LUEQ01000001_1	1.29\|1177406\|36\|NZ_LUEQ01000001\|CRISPRCasFinder,CRT,PILER-CR	1177406-1177441	36	MN128593	Listeria phage LP-031, complete genome	47079-47114	2	0.944
NZ_LUEQ01000001_1	1.29\|1177406\|36\|NZ_LUEQ01000001\|CRISPRCasFinder,CRT,PILER-CR	1177406-1177441	36	MN904502	Listeria phage LP-018, complete genome	47238-47273	2	0.944
NZ_LUEQ01000001_1	1.29\|1177406\|36\|NZ_LUEQ01000001\|CRISPRCasFinder,CRT,PILER-CR	1177406-1177441	36	JX442241	Listeria phage P70, complete genome	54397-54432	2	0.944
NZ_LUEQ01000001_1	1.29\|1177406\|36\|NZ_LUEQ01000001\|CRISPRCasFinder,CRT,PILER-CR	1177406-1177441	36	MN114082	Listeria phage LP-010, complete genome	47075-47110	2	0.944
NZ_LUEQ01000001_2	2.1\|1195093\|36\|NZ_LUEQ01000001\|PILER-CR,CRISPRCasFinder,CRT	1195093-1195128	36	NC_003216	Listeria phage A118, complete genome	20793-20828	2	0.944
NZ_LUEQ01000001_2	2.1\|1195093\|36\|NZ_LUEQ01000001\|PILER-CR,CRISPRCasFinder,CRT	1195093-1195128	36	AJ242593	Bacteriophage A118 complete genome	20793-20828	2	0.944
NZ_LUEQ01000001_2	2.1\|1195093\|36\|NZ_LUEQ01000001\|PILER-CR,CRISPRCasFinder,CRT	1195093-1195128	36	X85008	Bacteriophage A118 hol118 and ply118 genes	1041-1076	2	0.944
NZ_LUEQ01000001_2	2.1\|1195093\|36\|NZ_LUEQ01000001\|PILER-CR,CRISPRCasFinder,CRT	1195093-1195128	36	KJ094023	Listeria phage LP-101, complete genome	19817-19852	2	0.944
NZ_LUEQ01000001_2	2.3\|1195222\|35\|NZ_LUEQ01000001\|PILER-CR,CRISPRCasFinder,CRT	1195222-1195256	35	KJ094022	Listeria phage LP-030-3, complete genome	10018-10052	2	0.943
NZ_LUEQ01000001_1	1.19\|1176757\|36\|NZ_LUEQ01000001\|CRISPRCasFinder,CRT,PILER-CR	1176757-1176792	36	JB137888	Sequence 7 from Patent WO2012159774	4301-4336	3	0.917
NZ_LUEQ01000001_1	1.19\|1176757\|36\|NZ_LUEQ01000001\|CRISPRCasFinder,CRT,PILER-CR	1176757-1176792	36	KJ094026	Listeria phage LP-032 contig 3, partial genome	13818-13853	3	0.917
NZ_LUEQ01000001_1	1.19\|1176757\|36\|NZ_LUEQ01000001\|CRISPRCasFinder,CRT,PILER-CR	1176757-1176792	36	KJ094020	Listeria phage LP-026, complete genome	27349-27384	3	0.917
NZ_LUEQ01000001_1	1.21\|1176886\|37\|NZ_LUEQ01000001\|CRISPRCasFinder,CRT,PILER-CR	1176886-1176922	37	KJ094026	Listeria phage LP-032 contig 3, partial genome	12567-12603	3	0.919
NZ_LUEQ01000001_1	1.21\|1176886\|37\|NZ_LUEQ01000001\|CRISPRCasFinder,CRT,PILER-CR	1176886-1176922	37	NC_021787	Listeria phage LP-037, complete genome	2448-2484	3	0.919
NZ_LUEQ01000001_1	1.21\|1176886\|37\|NZ_LUEQ01000001\|CRISPRCasFinder,CRT,PILER-CR	1176886-1176922	37	JX442241	Listeria phage P70, complete genome	51699-51735	3	0.919
NZ_LUEQ01000001_1	1.21\|1176886\|37\|NZ_LUEQ01000001\|CRISPRCasFinder,CRT,PILER-CR	1176886-1176922	37	KJ094020	Listeria phage LP-026, complete genome	28599-28635	3	0.919
NZ_LUEQ01000001_1	1.29\|1177406\|36\|NZ_LUEQ01000001\|CRISPRCasFinder,CRT,PILER-CR	1177406-1177441	36	KJ094026	Listeria phage LP-032 contig 3, partial genome	10555-10590	3	0.917
NZ_LUEQ01000001_1	1.29\|1177406\|36\|NZ_LUEQ01000001\|CRISPRCasFinder,CRT,PILER-CR	1177406-1177441	36	NC_021787	Listeria phage LP-037, complete genome	4460-4495	3	0.917
NZ_LUEQ01000001_1	1.29\|1177406\|36\|NZ_LUEQ01000001\|CRISPRCasFinder,CRT,PILER-CR	1177406-1177441	36	KJ094020	Listeria phage LP-026, complete genome	30612-30647	3	0.917
NZ_LUEQ01000001_1	1.29\|1177406\|36\|NZ_LUEQ01000001\|CRISPRCasFinder,CRT,PILER-CR	1177406-1177441	36	KJ094021	Listeria phage LP-114, complete genome	37803-37838	3	0.917
NZ_LUEQ01000001_1	1.35\|1177796\|35\|NZ_LUEQ01000001\|CRISPRCasFinder,CRT,PILER-CR	1177796-1177830	35	JX442241	Listeria phage P70, complete genome	49521-49555	3	0.914
NZ_LUEQ01000001_1	1.33\|1177665\|37\|NZ_LUEQ01000001\|CRISPRCasFinder,CRT,PILER-CR	1177665-1177701	37	NZ_CP032752	Lactobacillus plantarum subsp. argentoratensis strain DSM 16365 plasmid unnamed1, complete sequence	29722-29758	8	0.784
NZ_LUEQ01000001_1	1.33\|1177665\|37\|NZ_LUEQ01000001\|CRISPRCasFinder,CRT,PILER-CR	1177665-1177701	37	NZ_CP035135	Lactobacillus plantarum strain SRCM103311 plasmid unnamed4	68937-68973	8	0.784
NZ_LUEQ01000001_2	2.2\|1195158\|35\|NZ_LUEQ01000001\|PILER-CR,CRISPRCasFinder,CRT	1195158-1195192	35	NZ_CP045351	Vibrio sp. THAF100 plasmid pTHAF100_a, complete sequence	1102881-1102915	8	0.771
NZ_LUEQ01000001_1	1.33\|1177665\|37\|NZ_LUEQ01000001\|CRISPRCasFinder,CRT,PILER-CR	1177665-1177701	37	NZ_CP035808	Spirochaeta perfilievii strain P plasmid pSpe, complete sequence	10176-10212	9	0.757
NZ_LUEQ01000001_1	1.33\|1177665\|37\|NZ_LUEQ01000001\|CRISPRCasFinder,CRT,PILER-CR	1177665-1177701	37	MK448847	Streptococcus phage Javan124, complete genome	13073-13109	9	0.757
NZ_LUEQ01000001_1	1.44\|1178379\|37\|NZ_LUEQ01000001\|CRISPRCasFinder,CRT,PILER-CR	1178379-1178415	37	MN694623	Marine virus AFVG_250M512, complete genome	7476-7512	9	0.757

1. spacer 1.3|1175717|36|NZ_LUEQ01000001|CRISPRCasFinder,CRT,PILER-CR matches to MH299806 (Listeria phage LP-KV022, complete genome) position: , mismatch: 0, identity: 1.0

gatgtctcttgcttggctggctcttgagatttctct	CRISPR spacer
gatgtctcttgcttggctggctcttgagatttctct	Protospacer
************************************

2. spacer 1.3|1175717|36|NZ_LUEQ01000001|CRISPRCasFinder,CRT,PILER-CR matches to MN114083 (Listeria phage LP-013, complete genome) position: , mismatch: 0, identity: 1.0

gatgtctcttgcttggctggctcttgagatttctct	CRISPR spacer
gatgtctcttgcttggctggctcttgagatttctct	Protospacer
************************************

3. spacer 1.3|1175717|36|NZ_LUEQ01000001|CRISPRCasFinder,CRT,PILER-CR matches to NC_021785 (Listeria phage LP-110, complete genome) position: , mismatch: 0, identity: 1.0

gatgtctcttgcttggctggctcttgagatttctct	CRISPR spacer
gatgtctcttgcttggctggctcttgagatttctct	Protospacer
************************************

4. spacer 1.3|1175717|36|NZ_LUEQ01000001|CRISPRCasFinder,CRT,PILER-CR matches to MN128593 (Listeria phage LP-031, complete genome) position: , mismatch: 0, identity: 1.0

gatgtctcttgcttggctggctcttgagatttctct	CRISPR spacer
gatgtctcttgcttggctggctcttgagatttctct	Protospacer
************************************

5. spacer 1.3|1175717|36|NZ_LUEQ01000001|CRISPRCasFinder,CRT,PILER-CR matches to JX442241 (Listeria phage P70, complete genome) position: , mismatch: 0, identity: 1.0

gatgtctcttgcttggctggctcttgagatttctct	CRISPR spacer
gatgtctcttgcttggctggctcttgagatttctct	Protospacer
************************************

6. spacer 1.3|1175717|36|NZ_LUEQ01000001|CRISPRCasFinder,CRT,PILER-CR matches to KJ094021 (Listeria phage LP-114, complete genome) position: , mismatch: 0, identity: 1.0

gatgtctcttgcttggctggctcttgagatttctct	CRISPR spacer
gatgtctcttgcttggctggctcttgagatttctct	Protospacer
************************************

7. spacer 1.3|1175717|36|NZ_LUEQ01000001|CRISPRCasFinder,CRT,PILER-CR matches to MN114082 (Listeria phage LP-010, complete genome) position: , mismatch: 0, identity: 1.0

gatgtctcttgcttggctggctcttgagatttctct	CRISPR spacer
gatgtctcttgcttggctggctcttgagatttctct	Protospacer
************************************

8. spacer 1.8|1176042|35|NZ_LUEQ01000001|CRISPRCasFinder,CRT,PILER-CR matches to MH341452 (Listeria phage PSU-VKH-LP040, complete genome) position: , mismatch: 0, identity: 1.0

ggaggtctgcctattgaaaaactcgtattatcgta	CRISPR spacer
ggaggtctgcctattgaaaaactcgtattatcgta	Protospacer
***********************************

9. spacer 1.21|1176886|37|NZ_LUEQ01000001|CRISPRCasFinder,CRT,PILER-CR matches to MH299806 (Listeria phage LP-KV022, complete genome) position: , mismatch: 0, identity: 1.0

cgtcagtccgccacatcaaagaatttatgcgacaaaa	CRISPR spacer
cgtcagtccgccacatcaaagaatttatgcgacaaaa	Protospacer
*************************************

10. spacer 1.21|1176886|37|NZ_LUEQ01000001|CRISPRCasFinder,CRT,PILER-CR matches to MN114083 (Listeria phage LP-013, complete genome) position: , mismatch: 0, identity: 1.0

cgtcagtccgccacatcaaagaatttatgcgacaaaa	CRISPR spacer
cgtcagtccgccacatcaaagaatttatgcgacaaaa	Protospacer
*************************************

11. spacer 1.21|1176886|37|NZ_LUEQ01000001|CRISPRCasFinder,CRT,PILER-CR matches to NC_021785 (Listeria phage LP-110, complete genome) position: , mismatch: 0, identity: 1.0

cgtcagtccgccacatcaaagaatttatgcgacaaaa	CRISPR spacer
cgtcagtccgccacatcaaagaatttatgcgacaaaa	Protospacer
*************************************

12. spacer 1.21|1176886|37|NZ_LUEQ01000001|CRISPRCasFinder,CRT,PILER-CR matches to MN128593 (Listeria phage LP-031, complete genome) position: , mismatch: 0, identity: 1.0

cgtcagtccgccacatcaaagaatttatgcgacaaaa	CRISPR spacer
cgtcagtccgccacatcaaagaatttatgcgacaaaa	Protospacer
*************************************

13. spacer 1.21|1176886|37|NZ_LUEQ01000001|CRISPRCasFinder,CRT,PILER-CR matches to MN904502 (Listeria phage LP-018, complete genome) position: , mismatch: 0, identity: 1.0

cgtcagtccgccacatcaaagaatttatgcgacaaaa	CRISPR spacer
cgtcagtccgccacatcaaagaatttatgcgacaaaa	Protospacer
*************************************

14. spacer 1.21|1176886|37|NZ_LUEQ01000001|CRISPRCasFinder,CRT,PILER-CR matches to KJ094021 (Listeria phage LP-114, complete genome) position: , mismatch: 0, identity: 1.0

cgtcagtccgccacatcaaagaatttatgcgacaaaa	CRISPR spacer
cgtcagtccgccacatcaaagaatttatgcgacaaaa	Protospacer
*************************************

15. spacer 1.21|1176886|37|NZ_LUEQ01000001|CRISPRCasFinder,CRT,PILER-CR matches to MN114082 (Listeria phage LP-010, complete genome) position: , mismatch: 0, identity: 1.0

cgtcagtccgccacatcaaagaatttatgcgacaaaa	CRISPR spacer
cgtcagtccgccacatcaaagaatttatgcgacaaaa	Protospacer
*************************************

16. spacer 1.47|1178576|35|NZ_LUEQ01000001|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP011399 (Listeria monocytogenes strain CFSAN008100 plasmid pCFSAN008100, complete sequence) position: , mismatch: 0, identity: 1.0

gaaagtttacccacacgcaatgcgttgtaatccaa	CRISPR spacer
gaaagtttacccacacgcaatgcgttgtaatccaa	Protospacer
***********************************

17. spacer 1.47|1178576|35|NZ_LUEQ01000001|CRISPRCasFinder,CRT,PILER-CR matches to KJ094023 (Listeria phage LP-101, complete genome) position: , mismatch: 0, identity: 1.0

gaaagtttacccacacgcaatgcgttgtaatccaa	CRISPR spacer
gaaagtttacccacacgcaatgcgttgtaatccaa	Protospacer
***********************************

18. spacer 2.2|1195158|35|NZ_LUEQ01000001|PILER-CR,CRISPRCasFinder,CRT matches to DQ003642 (Listeria phage A006, complete genome) position: , mismatch: 0, identity: 1.0

gaagatcgtttctatgatacttttgattttacaga	CRISPR spacer
gaagatcgtttctatgatacttttgattttacaga	Protospacer
***********************************

19. spacer 2.4|1195286|37|NZ_LUEQ01000001|PILER-CR,CRISPRCasFinder,CRT matches to MH299806 (Listeria phage LP-KV022, complete genome) position: , mismatch: 0, identity: 1.0

ttagaaaatctttttctttgattccaaattcagctaa	CRISPR spacer
ttagaaaatctttttctttgattccaaattcagctaa	Protospacer
*************************************

20. spacer 2.4|1195286|37|NZ_LUEQ01000001|PILER-CR,CRISPRCasFinder,CRT matches to JB137888 (Sequence 7 from Patent WO2012159774) position: , mismatch: 0, identity: 1.0

ttagaaaatctttttctttgattccaaattcagctaa	CRISPR spacer
ttagaaaatctttttctttgattccaaattcagctaa	Protospacer
*************************************

21. spacer 2.4|1195286|37|NZ_LUEQ01000001|PILER-CR,CRISPRCasFinder,CRT matches to KJ094025 (Listeria phage LP-032 contig 2, partial genome) position: , mismatch: 0, identity: 1.0

ttagaaaatctttttctttgattccaaattcagctaa	CRISPR spacer
ttagaaaatctttttctttgattccaaattcagctaa	Protospacer
*************************************

22. spacer 2.4|1195286|37|NZ_LUEQ01000001|PILER-CR,CRISPRCasFinder,CRT matches to MN114083 (Listeria phage LP-013, complete genome) position: , mismatch: 0, identity: 1.0

ttagaaaatctttttctttgattccaaattcagctaa	CRISPR spacer
ttagaaaatctttttctttgattccaaattcagctaa	Protospacer
*************************************

23. spacer 2.4|1195286|37|NZ_LUEQ01000001|PILER-CR,CRISPRCasFinder,CRT matches to NC_021785 (Listeria phage LP-110, complete genome) position: , mismatch: 0, identity: 1.0

ttagaaaatctttttctttgattccaaattcagctaa	CRISPR spacer
ttagaaaatctttttctttgattccaaattcagctaa	Protospacer
*************************************

24. spacer 2.4|1195286|37|NZ_LUEQ01000001|PILER-CR,CRISPRCasFinder,CRT matches to MN128593 (Listeria phage LP-031, complete genome) position: , mismatch: 0, identity: 1.0

ttagaaaatctttttctttgattccaaattcagctaa	CRISPR spacer
ttagaaaatctttttctttgattccaaattcagctaa	Protospacer
*************************************

25. spacer 2.4|1195286|37|NZ_LUEQ01000001|PILER-CR,CRISPRCasFinder,CRT matches to NC_021787 (Listeria phage LP-037, complete genome) position: , mismatch: 0, identity: 1.0

ttagaaaatctttttctttgattccaaattcagctaa	CRISPR spacer
ttagaaaatctttttctttgattccaaattcagctaa	Protospacer
*************************************

26. spacer 2.4|1195286|37|NZ_LUEQ01000001|PILER-CR,CRISPRCasFinder,CRT matches to MN904502 (Listeria phage LP-018, complete genome) position: , mismatch: 0, identity: 1.0

ttagaaaatctttttctttgattccaaattcagctaa	CRISPR spacer
ttagaaaatctttttctttgattccaaattcagctaa	Protospacer
*************************************

27. spacer 2.4|1195286|37|NZ_LUEQ01000001|PILER-CR,CRISPRCasFinder,CRT matches to JX442241 (Listeria phage P70, complete genome) position: , mismatch: 0, identity: 1.0

ttagaaaatctttttctttgattccaaattcagctaa	CRISPR spacer
ttagaaaatctttttctttgattccaaattcagctaa	Protospacer
*************************************

28. spacer 2.4|1195286|37|NZ_LUEQ01000001|PILER-CR,CRISPRCasFinder,CRT matches to KJ094020 (Listeria phage LP-026, complete genome) position: , mismatch: 0, identity: 1.0

ttagaaaatctttttctttgattccaaattcagctaa	CRISPR spacer
ttagaaaatctttttctttgattccaaattcagctaa	Protospacer
*************************************

29. spacer 2.4|1195286|37|NZ_LUEQ01000001|PILER-CR,CRISPRCasFinder,CRT matches to KJ094021 (Listeria phage LP-114, complete genome) position: , mismatch: 0, identity: 1.0

ttagaaaatctttttctttgattccaaattcagctaa	CRISPR spacer
ttagaaaatctttttctttgattccaaattcagctaa	Protospacer
*************************************

30. spacer 2.4|1195286|37|NZ_LUEQ01000001|PILER-CR,CRISPRCasFinder,CRT matches to MN114082 (Listeria phage LP-010, complete genome) position: , mismatch: 0, identity: 1.0

ttagaaaatctttttctttgattccaaattcagctaa	CRISPR spacer
ttagaaaatctttttctttgattccaaattcagctaa	Protospacer
*************************************

31. spacer 1.3|1175717|36|NZ_LUEQ01000001|CRISPRCasFinder,CRT,PILER-CR matches to JB137888 (Sequence 7 from Patent WO2012159774) position: , mismatch: 1, identity: 0.972

gatgtctcttgcttggctggctcttgagatttctct	CRISPR spacer
gatgtctcctgcttggctggctcttgagatttctct	Protospacer
********.***************************

32. spacer 1.3|1175717|36|NZ_LUEQ01000001|CRISPRCasFinder,CRT,PILER-CR matches to KJ094025 (Listeria phage LP-032 contig 2, partial genome) position: , mismatch: 1, identity: 0.972

gatgtctcttgcttggctggctcttgagatttctct	CRISPR spacer
gatgtctcctgcttggctggctcttgagatttctct	Protospacer
********.***************************

33. spacer 1.3|1175717|36|NZ_LUEQ01000001|CRISPRCasFinder,CRT,PILER-CR matches to NC_021787 (Listeria phage LP-037, complete genome) position: , mismatch: 1, identity: 0.972

gatgtctcttgcttggctggctcttgagatttctct	CRISPR spacer
gatgtctcctgcttggctggctcttgagatttctct	Protospacer
********.***************************

34. spacer 1.3|1175717|36|NZ_LUEQ01000001|CRISPRCasFinder,CRT,PILER-CR matches to MN904502 (Listeria phage LP-018, complete genome) position: , mismatch: 1, identity: 0.972

gatgtctcttgcttggctggctcttgagatttctct	CRISPR spacer
gatgtctcctgcttggctggctcttgagatttctct	Protospacer
********.***************************

35. spacer 1.3|1175717|36|NZ_LUEQ01000001|CRISPRCasFinder,CRT,PILER-CR matches to KJ094020 (Listeria phage LP-026, complete genome) position: , mismatch: 1, identity: 0.972

gatgtctcttgcttggctggctcttgagatttctct	CRISPR spacer
gatgtctcctgcttggctggctcttgagatttctct	Protospacer
********.***************************

36. spacer 1.5|1175848|36|NZ_LUEQ01000001|CRISPRCasFinder,CRT,PILER-CR matches to NC_021539 (Listeria phage LP-030-2, complete genome) position: , mismatch: 1, identity: 0.972

atatttgaccgtgcccggtaaaactaccgcaaacgt	CRISPR spacer
atatttgaccgtgcccggtaaaactaccgcgaacgt	Protospacer
******************************.*****

37. spacer 1.5|1175848|36|NZ_LUEQ01000001|CRISPRCasFinder,CRT,PILER-CR matches to AJ312240 (Bacteriophage PSA complete genome) position: , mismatch: 1, identity: 0.972

atatttgaccgtgcccggtaaaactaccgcaaacgt	CRISPR spacer
atatttgaccgtgcccggtaaaactaccgcgaacgt	Protospacer
******************************.*****

38. spacer 2.1|1195093|36|NZ_LUEQ01000001|PILER-CR,CRISPRCasFinder,CRT matches to DQ003642 (Listeria phage A006, complete genome) position: , mismatch: 1, identity: 0.972

agttttccccatccccgaaatcgtgaagactgtgcc	CRISPR spacer
cgttttccccatccccgaaatcgtgaagactgtgcc	Protospacer
 ***********************************

39. spacer 2.2|1195158|35|NZ_LUEQ01000001|PILER-CR,CRISPRCasFinder,CRT matches to MH341451 (Listeria phage PSU-VKH-LP019, complete genome) position: , mismatch: 1, identity: 0.971

gaagatcgtttctatgatacttttgattttacaga	CRISPR spacer
gaagatcgtttctatgatacttttgattttacgga	Protospacer
********************************.**

40. spacer 2.2|1195158|35|NZ_LUEQ01000001|PILER-CR,CRISPRCasFinder,CRT matches to KP399677 (Listeria phage vB_LmoS_188, complete genome) position: , mismatch: 1, identity: 0.971

gaagatcgtttctatgatacttttgattttacaga	CRISPR spacer
gaagatcgtttctatgatacttttgattttacgga	Protospacer
********************************.**

41. spacer 1.8|1176042|35|NZ_LUEQ01000001|CRISPRCasFinder,CRT,PILER-CR matches to JB137888 (Sequence 7 from Patent WO2012159774) position: , mismatch: 2, identity: 0.943

ggaggtctgcctattgaaaaactcgtattatcgta	CRISPR spacer
ggaggtctacctattgaaaatctcgtattatcgta	Protospacer
********.*********** **************

42. spacer 1.8|1176042|35|NZ_LUEQ01000001|CRISPRCasFinder,CRT,PILER-CR matches to NC_009812 (Listeria phage B025, complete genome) position: , mismatch: 2, identity: 0.943

ggaggtctgcctattgaaaaactcgtattatcgta	CRISPR spacer
ggaggtctacctattgaaaatctcgtattatcgta	Protospacer
********.*********** **************

43. spacer 1.8|1176042|35|NZ_LUEQ01000001|CRISPRCasFinder,CRT,PILER-CR matches to KJ094023 (Listeria phage LP-101, complete genome) position: , mismatch: 2, identity: 0.943

ggaggtctgcctattgaaaaactcgtattatcgta	CRISPR spacer
ggaggtctacctattgaaaatctcgtattatcgta	Protospacer
********.*********** **************

44. spacer 1.21|1176886|37|NZ_LUEQ01000001|CRISPRCasFinder,CRT,PILER-CR matches to JB137888 (Sequence 7 from Patent WO2012159774) position: , mismatch: 2, identity: 0.946

cgtcagtccgccacatcaaagaatttatgcgacaaaa	CRISPR spacer
cgccagttcgccacatcaaagaatttatgcgacaaaa	Protospacer
**.****.*****************************

45. spacer 1.27|1177277|37|NZ_LUEQ01000001|CRISPRCasFinder,CRT,PILER-CR matches to MH299806 (Listeria phage LP-KV022, complete genome) position: , mismatch: 2, identity: 0.946

aacaaaccaatacagaaagtaaccaaaatcaaattat	CRISPR spacer
aacaaaccaattcaaaaagtaaccaaaatcaaattat	Protospacer
*********** **.**********************

46. spacer 1.27|1177277|37|NZ_LUEQ01000001|CRISPRCasFinder,CRT,PILER-CR matches to MN114083 (Listeria phage LP-013, complete genome) position: , mismatch: 2, identity: 0.946

aacaaaccaatacagaaagtaaccaaaatcaaattat	CRISPR spacer
aacaaaccaattcaaaaagtaaccaaaatcaaattat	Protospacer
*********** **.**********************

47. spacer 1.27|1177277|37|NZ_LUEQ01000001|CRISPRCasFinder,CRT,PILER-CR matches to NC_021785 (Listeria phage LP-110, complete genome) position: , mismatch: 2, identity: 0.946

aacaaaccaatacagaaagtaaccaaaatcaaattat	CRISPR spacer
aacaaaccaattcaaaaagtaaccaaaatcaaattat	Protospacer
*********** **.**********************

48. spacer 1.27|1177277|37|NZ_LUEQ01000001|CRISPRCasFinder,CRT,PILER-CR matches to MN128593 (Listeria phage LP-031, complete genome) position: , mismatch: 2, identity: 0.946

aacaaaccaatacagaaagtaaccaaaatcaaattat	CRISPR spacer
aacaaaccaattcaaaaagtaaccaaaatcaaattat	Protospacer
*********** **.**********************

49. spacer 1.27|1177277|37|NZ_LUEQ01000001|CRISPRCasFinder,CRT,PILER-CR matches to NC_021787 (Listeria phage LP-037, complete genome) position: , mismatch: 2, identity: 0.946

aacaaaccaatacagaaagtaaccaaaatcaaattat	CRISPR spacer
aacaaaccaattcaaaaagtaaccaaaatcaaattat	Protospacer
*********** **.**********************

50. spacer 1.27|1177277|37|NZ_LUEQ01000001|CRISPRCasFinder,CRT,PILER-CR matches to MN904502 (Listeria phage LP-018, complete genome) position: , mismatch: 2, identity: 0.946

aacaaaccaatacagaaagtaaccaaaatcaaattat	CRISPR spacer
aacaaaccaattcaaaaagtaaccaaaatcaaattat	Protospacer
*********** **.**********************

51. spacer 1.27|1177277|37|NZ_LUEQ01000001|CRISPRCasFinder,CRT,PILER-CR matches to JX442241 (Listeria phage P70, complete genome) position: , mismatch: 2, identity: 0.946

aacaaaccaatacagaaagtaaccaaaatcaaattat	CRISPR spacer
aacaaaccaattcaaaaagtaaccaaaatcaaattat	Protospacer
*********** **.**********************

52. spacer 1.27|1177277|37|NZ_LUEQ01000001|CRISPRCasFinder,CRT,PILER-CR matches to KJ094021 (Listeria phage LP-114, complete genome) position: , mismatch: 2, identity: 0.946

aacaaaccaatacagaaagtaaccaaaatcaaattat	CRISPR spacer
aacaaaccaattcaaaaagtaaccaaaatcaaattat	Protospacer
*********** **.**********************

53. spacer 1.27|1177277|37|NZ_LUEQ01000001|CRISPRCasFinder,CRT,PILER-CR matches to MN114082 (Listeria phage LP-010, complete genome) position: , mismatch: 2, identity: 0.946

aacaaaccaatacagaaagtaaccaaaatcaaattat	CRISPR spacer
aacaaaccaattcaaaaagtaaccaaaatcaaattat	Protospacer
*********** **.**********************

54. spacer 1.29|1177406|36|NZ_LUEQ01000001|CRISPRCasFinder,CRT,PILER-CR matches to MN114083 (Listeria phage LP-013, complete genome) position: , mismatch: 2, identity: 0.944

ggtagtattgagtgtagggactttggtggtaatggt	CRISPR spacer
ggtagtattgagtgttgggactttggtggtaatgtt	Protospacer
*************** ****************** *

55. spacer 1.29|1177406|36|NZ_LUEQ01000001|CRISPRCasFinder,CRT,PILER-CR matches to MN128593 (Listeria phage LP-031, complete genome) position: , mismatch: 2, identity: 0.944

ggtagtattgagtgtagggactttggtggtaatggt	CRISPR spacer
ggtagtattgagtgtaggaactttggtggtaatgtt	Protospacer
******************.*************** *

56. spacer 1.29|1177406|36|NZ_LUEQ01000001|CRISPRCasFinder,CRT,PILER-CR matches to MN904502 (Listeria phage LP-018, complete genome) position: , mismatch: 2, identity: 0.944

ggtagtattgagtgtagggactttggtggtaatggt	CRISPR spacer
ggtagtattgagtgttgggactttggtggtaatgtt	Protospacer
*************** ****************** *

57. spacer 1.29|1177406|36|NZ_LUEQ01000001|CRISPRCasFinder,CRT,PILER-CR matches to JX442241 (Listeria phage P70, complete genome) position: , mismatch: 2, identity: 0.944

ggtagtattgagtgtagggactttggtggtaatggt	CRISPR spacer
ggtagtattgagtgttgggactttggtggtaatgtt	Protospacer
*************** ****************** *

58. spacer 1.29|1177406|36|NZ_LUEQ01000001|CRISPRCasFinder,CRT,PILER-CR matches to MN114082 (Listeria phage LP-010, complete genome) position: , mismatch: 2, identity: 0.944

ggtagtattgagtgtagggactttggtggtaatggt	CRISPR spacer
ggtagtattgagtgttgggactttggtggtaatgtt	Protospacer
*************** ****************** *

59. spacer 2.1|1195093|36|NZ_LUEQ01000001|PILER-CR,CRISPRCasFinder,CRT matches to NC_003216 (Listeria phage A118, complete genome) position: , mismatch: 2, identity: 0.944

agttttccccatccccgaaatcgtgaagactgtgcc	CRISPR spacer
cgttttccccatccctgaaatcgtgaagactgtgcc	Protospacer
 **************.********************

60. spacer 2.1|1195093|36|NZ_LUEQ01000001|PILER-CR,CRISPRCasFinder,CRT matches to AJ242593 (Bacteriophage A118 complete genome) position: , mismatch: 2, identity: 0.944

agttttccccatccccgaaatcgtgaagactgtgcc	CRISPR spacer
cgttttccccatccctgaaatcgtgaagactgtgcc	Protospacer
 **************.********************

61. spacer 2.1|1195093|36|NZ_LUEQ01000001|PILER-CR,CRISPRCasFinder,CRT matches to X85008 (Bacteriophage A118 hol118 and ply118 genes) position: , mismatch: 2, identity: 0.944

agttttccccatccccgaaatcgtgaagactgtgcc	CRISPR spacer
cgttttccccatccctgaaatcgtgaagactgtgcc	Protospacer
 **************.********************

62. spacer 2.1|1195093|36|NZ_LUEQ01000001|PILER-CR,CRISPRCasFinder,CRT matches to KJ094023 (Listeria phage LP-101, complete genome) position: , mismatch: 2, identity: 0.944

agttttccccatccccgaaatcgtgaagactgtgcc	CRISPR spacer
cgttttccccatccccgcaatcgtgaagactgtgcc	Protospacer
 **************** ******************

63. spacer 2.3|1195222|35|NZ_LUEQ01000001|PILER-CR,CRISPRCasFinder,CRT matches to KJ094022 (Listeria phage LP-030-3, complete genome) position: , mismatch: 2, identity: 0.943

aaagattatggcgttagcttacaccacatcgcaaa	CRISPR spacer
aaagattatggcgttagcttacaccccgtcgcaaa	Protospacer
************************* *.*******

64. spacer 1.19|1176757|36|NZ_LUEQ01000001|CRISPRCasFinder,CRT,PILER-CR matches to JB137888 (Sequence 7 from Patent WO2012159774) position: , mismatch: 3, identity: 0.917

attatcaacagacgagtttttggcaatgcttggtta	CRISPR spacer
tttatcaacagaggaatttttggcaatgcttggtta	Protospacer
 *********** **.********************

65. spacer 1.19|1176757|36|NZ_LUEQ01000001|CRISPRCasFinder,CRT,PILER-CR matches to KJ094026 (Listeria phage LP-032 contig 3, partial genome) position: , mismatch: 3, identity: 0.917

attatcaacagacgagtttttggcaatgcttggtta	CRISPR spacer
gttatcaacagatgagtttttggcaatgcttggata	Protospacer
.***********.******************** **

66. spacer 1.19|1176757|36|NZ_LUEQ01000001|CRISPRCasFinder,CRT,PILER-CR matches to KJ094020 (Listeria phage LP-026, complete genome) position: , mismatch: 3, identity: 0.917

attatcaacagacgagtttttggcaatgcttggtta	CRISPR spacer
gttatcaacagatgagtttttggcaatgcttggata	Protospacer
.***********.******************** **

67. spacer 1.21|1176886|37|NZ_LUEQ01000001|CRISPRCasFinder,CRT,PILER-CR matches to KJ094026 (Listeria phage LP-032 contig 3, partial genome) position: , mismatch: 3, identity: 0.919

cgtcagtccgccacatcaaagaatttatgcgacaaaa	CRISPR spacer
catcaattcgccacatcaaagaatttatgcgacaaaa	Protospacer
*.***.*.*****************************

68. spacer 1.21|1176886|37|NZ_LUEQ01000001|CRISPRCasFinder,CRT,PILER-CR matches to NC_021787 (Listeria phage LP-037, complete genome) position: , mismatch: 3, identity: 0.919

cgtcagtccgccacatcaaagaatttatgcgacaaaa	CRISPR spacer
catcaattcgccacatcaaagaatttatgcgacaaaa	Protospacer
*.***.*.*****************************

69. spacer 1.21|1176886|37|NZ_LUEQ01000001|CRISPRCasFinder,CRT,PILER-CR matches to JX442241 (Listeria phage P70, complete genome) position: , mismatch: 3, identity: 0.919

cgtcagtccgccacatcaaagaatttatgcgacaaaa	CRISPR spacer
catcaattcgccacatcaaagaatttatgcgacaaaa	Protospacer
*.***.*.*****************************

70. spacer 1.21|1176886|37|NZ_LUEQ01000001|CRISPRCasFinder,CRT,PILER-CR matches to KJ094020 (Listeria phage LP-026, complete genome) position: , mismatch: 3, identity: 0.919

cgtcagtccgccacatcaaagaatttatgcgacaaaa	CRISPR spacer
catcaattcgccacatcaaagaatttatgcgacaaaa	Protospacer
*.***.*.*****************************

71. spacer 1.29|1177406|36|NZ_LUEQ01000001|CRISPRCasFinder,CRT,PILER-CR matches to KJ094026 (Listeria phage LP-032 contig 3, partial genome) position: , mismatch: 3, identity: 0.917

ggtagtattgagtgtagggactttggtggtaatggt	CRISPR spacer
ggtagtattgagtgtaggaacattggtggtaatgtt	Protospacer
******************.** ************ *

72. spacer 1.29|1177406|36|NZ_LUEQ01000001|CRISPRCasFinder,CRT,PILER-CR matches to NC_021787 (Listeria phage LP-037, complete genome) position: , mismatch: 3, identity: 0.917

ggtagtattgagtgtagggactttggtggtaatggt	CRISPR spacer
ggtagtattgagtgtaggaacattggtggtaatgtt	Protospacer
******************.** ************ *

73. spacer 1.29|1177406|36|NZ_LUEQ01000001|CRISPRCasFinder,CRT,PILER-CR matches to KJ094020 (Listeria phage LP-026, complete genome) position: , mismatch: 3, identity: 0.917

ggtagtattgagtgtagggactttggtggtaatggt	CRISPR spacer
ggtagtattgagtgtaggaacattggtggtaatgtt	Protospacer
******************.** ************ *

74. spacer 1.29|1177406|36|NZ_LUEQ01000001|CRISPRCasFinder,CRT,PILER-CR matches to KJ094021 (Listeria phage LP-114, complete genome) position: , mismatch: 3, identity: 0.917

ggtagtattgagtgtagggactttggtggtaatggt	CRISPR spacer
ggtagtattgagtgtaggaacattggtggtaatgtt	Protospacer
******************.** ************ *

75. spacer 1.35|1177796|35|NZ_LUEQ01000001|CRISPRCasFinder,CRT,PILER-CR matches to JX442241 (Listeria phage P70, complete genome) position: , mismatch: 3, identity: 0.914

tcgaagcagaaaacgtatctcaaatttttaatggg	CRISPR spacer
tcgaagtagaaaacgtatctcaaatttttaaaggc	Protospacer
******.************************ **

76. spacer 1.33|1177665|37|NZ_LUEQ01000001|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032752 (Lactobacillus plantarum subsp. argentoratensis strain DSM 16365 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.784

gatttatttgctggggtaggaggttttcgcttaggga	CRISPR spacer
gaattatttgctggggttggaggttttaggattggtt	Protospacer
** ************** ********* *  * **

77. spacer 1.33|1177665|37|NZ_LUEQ01000001|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP035135 (Lactobacillus plantarum strain SRCM103311 plasmid unnamed4) position: , mismatch: 8, identity: 0.784

gatttatttgctggggtaggaggttttcgcttaggga	CRISPR spacer
gaattatttgctggggttggaggttttaggattggtt	Protospacer
** ************** ********* *  * **

78. spacer 2.2|1195158|35|NZ_LUEQ01000001|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045351 (Vibrio sp. THAF100 plasmid pTHAF100_a, complete sequence) position: , mismatch: 8, identity: 0.771

-----gaagatcgtttctatgatacttttgattttacaga	CRISPR spacer
tatcataaaatcg-----atgatacttttgattttacgga	Protospacer
      **.****     *******************.**

79. spacer 1.33|1177665|37|NZ_LUEQ01000001|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP035808 (Spirochaeta perfilievii strain P plasmid pSpe, complete sequence) position: , mismatch: 9, identity: 0.757

gatttatttgctggggtaggaggttttcgcttaggga	CRISPR spacer
gatttatttgctggagcaggaggtttttctcatggaa	Protospacer
**************.*.**********. ..  **.*

80. spacer 1.33|1177665|37|NZ_LUEQ01000001|CRISPRCasFinder,CRT,PILER-CR matches to MK448847 (Streptococcus phage Javan124, complete genome) position: , mismatch: 9, identity: 0.757

gatttatttgctggggtaggaggttttcgcttaggga	CRISPR spacer
gatttttttgctggagtaggaggtttcagaaaaggtc	Protospacer
***** ********.***********. *   ***

81. spacer 1.44|1178379|37|NZ_LUEQ01000001|CRISPRCasFinder,CRT,PILER-CR matches to MN694623 (Marine virus AFVG_250M512, complete genome) position: , mismatch: 9, identity: 0.757

tttagctgtgttgtctaattctacattctctaaatct	CRISPR spacer
cttgccaggcttgtctaattctatattcactaaatca	Protospacer
.**. * *  *************.**** *******

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

395890 : 457110

Streptococcus_phage(15.79%)

tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003732816.1\|395890_397597_-\|tRNA	proline--tRNA ligase	NA	NA	NA	NA
WP_003723454.1\|397636_398899_-\|protease	RIP metalloprotease RseP	NA	NA	NA	NA
WP_010989733.1\|398912_400055_-	1-deoxy-D-xylulose-5-phosphate reductoisomerase	NA	NA	NA	NA
WP_014600800.1\|400069_400858_-	phosphatidate cytidylyltransferase	NA	NA	NA	NA
WP_003732812.1\|400871_401630_-	isoprenyl transferase	R9W0U9	Flavobacterium_phage	4.4e-22	42.1
WP_003723450.1\|401860_402418_-	ribosome recycling factor	NA	NA	NA	NA
WP_003723449.1\|402417_403146_-	UMP kinase	NA	NA	NA	NA
WP_003723448.1\|403438_403813_+	hypothetical protein	NA	NA	NA	NA
WP_010989732.1\|403790_404996_+	helicase SNF2	L0P6E9	Lactobacillus_phage	4.9e-92	47.1
WP_003723446.1\|404985_406290_+	DUF3440 domain-containing protein	A0A220GKF8	Streptococcus_phage	9.5e-134	52.1
WP_003723445.1\|406299_406806_+	ParB-like nuclease domain-containing protein	A0A220GKT8	Streptococcus_phage	4.0e-56	66.7
WP_014600798.1\|406827_407559_+	methyltransferase domain-containing protein	A0A1X9I6N4	Streptococcus_phage	4.4e-80	58.7
WP_060567742.1\|407577_408420_+	DUF2785 domain-containing protein	NA	NA	NA	NA
WP_003723442.1\|408470_408710_-	YneF family protein	NA	NA	NA	NA
WP_061665113.1\|408930_410925_-	transketolase	NA	NA	NA	NA
WP_003723440.1\|411071_411299_-	DUF896 domain-containing protein	NA	NA	NA	NA
WP_003723439.1\|411390_411720_-	cell division suppressor protein YneA	NA	NA	NA	NA
WP_003723438.1\|411876_412491_+	transcriptional repressor LexA	A0A1B2APZ1	Phage_Wrath	9.3e-15	62.1
WP_003723437.1\|412520_413042_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_061665114.1\|413085_414381_-	arsenic transporter	A0A2H4PQU3	Staphylococcus_phage	5.3e-145	61.4
WP_003723435.1\|414524_415859_-	type I glutamate--ammonia ligase	M1NM71	Moumouvirus	4.2e-12	23.8
WP_003719570.1\|415929_416298_-	MerR family transcriptional regulator	NA	NA	NA	NA
WP_061665115.1\|416500_417727_-	methionine gamma-lyase family protein	NA	NA	NA	NA
WP_077949509.1\|417719_418943_-	GTPase HflX	NA	NA	NA	NA
WP_003719566.1\|419053_419287_-	RNA chaperone Hfq	NA	NA	NA	NA
WP_012951578.1\|419409_420327_-\|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	NA	NA	NA	NA
WP_003723738.1\|420452_422129_-	glycerol-3-phosphate dehydrogenase/oxidase	NA	NA	NA	NA
WP_009925395.1\|422361_423060_-	glycerophosphodiester phosphodiesterase	A0A0S2MYI4	Enterococcus_phage	9.9e-13	32.4
WP_012951576.1\|423272_425141_+	peptidoglycan O-acetyltransferase OatA	B5WZU0	Pseudomonas_phage	6.5e-43	31.9
WP_061665119.1\|425174_427007_-	class 1 internalin InlK	NA	NA	NA	NA
WP_061665121.1\|427338_429072_-	LapB repeat-containing protein	NA	NA	NA	NA
WP_009913867.1\|429397_429865_-	S-ribosylhomocysteine lyase	NA	NA	NA	NA
WP_010989723.1\|429947_432407_-	DNA topoisomerase IV subunit A	G3M9Z5	Bacillus_virus	4.7e-102	31.6
WP_003723731.1\|432403_434371_-	DNA topoisomerase IV subunit B	G3M9Z3	Bacillus_virus	6.7e-123	42.5
WP_003732802.1\|434551_434959_-	CoA-binding protein	NA	NA	NA	NA
WP_003724132.1\|435116_435713_+	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA
WP_009932949.1\|435754_436627_-	aldose 1-epimerase family protein	NA	NA	NA	NA
WP_003724130.1\|436629_436941_-	hypothetical protein	NA	NA	NA	NA
WP_003724129.1\|436962_437382_-	acyl-CoA thioesterase	NA	NA	NA	NA
WP_003726695.1\|437484_438264_-	GTP-sensing pleiotropic transcriptional regulator CodY	NA	NA	NA	NA
WP_061665123.1\|438284_439694_-\|protease	ATP-dependent protease ATPase subunit HslU	A0A1B2IBU3	Erwinia_phage	1.4e-29	26.0
WP_003724001.1\|439707_440247_-\|protease	ATP-dependent protease subunit HslV	NA	NA	NA	NA
WP_009911635.1\|440267_441170_-	tyrosine recombinase XerC	A0A1B1IQT7	uncultured_Mediterranean_phage	8.0e-23	28.0
WP_003723999.1\|441452_442757_-\|tRNA	FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO	NA	NA	NA	NA
WP_061398655.1\|442819_444898_-	type I DNA topoisomerase	A0A1V0SB35	Catovirus	1.9e-107	37.7
WP_003723892.1\|445169_446030_-	DNA-protecting protein DprA	S6BFL3	Thermus_phage	1.2e-39	43.2
WP_003723891.1\|446163_446949_-	ribonuclease HII	G4YAY0	Emiliania_huxleyi_virus	3.0e-26	39.2
WP_003723890.1\|446945_447809_-	ribosome biogenesis GTPase YlqF	NA	NA	NA	NA
WP_003723889.1\|447818_448361_-	type I signal peptidase SipZ	NA	NA	NA	NA
WP_003723888.1\|448462_449032_-	type I signal peptidase SipY	NA	NA	NA	NA
WP_061665125.1\|449066_449633_-	type I signal peptidase SipX	NA	NA	NA	NA
WP_003723886.1\|449751_451011_-\|protease	ATP-dependent protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	1.4e-145	63.2
WP_003723884.1\|451195_452479_-	trigger factor	NA	NA	NA	NA
WP_003732796.1\|452593_453532_-	hypothetical protein	NA	NA	NA	NA
WP_003732795.1\|453793_454459_-	hypothetical protein	NA	NA	NA	NA
WP_003732794.1\|454476_455010_-\|protease	matrixin family metalloprotease	NA	NA	NA	NA
WP_003727524.1\|455128_455344_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_003723563.1\|455494_455890_+	helix-turn-helix transcriptional regulator	A9D9J6	Lactobacillus_prophage	1.3e-14	57.4
WP_003723562.1\|455970_457110_+\|protease	PrsW family intramembrane metalloprotease	NA	NA	NA	NA

DBSCAN-SWA_2

594315 : 601737

Hokovirus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_077949513.1\|594315_595872_-	glutamine-hydrolyzing GMP synthase	A0A1V0SH76	Hokovirus	3.9e-17	28.1
WP_003721512.1\|596000_596405_-	PTS sugar transporter subunit IIB	NA	NA	NA	NA
WP_039384194.1\|596464_596773_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
WP_033918355.1\|596785_597610_-	ammonia-dependent NAD(+) synthetase	G3MA24	Bacillus_virus	9.7e-68	52.9
WP_003721509.1\|597621_599112_-	nicotinate phosphoribosyltransferase	G3MA18	Bacillus_virus	9.5e-114	49.7
WP_010989660.1\|599320_600334_-	glycosyltransferase	A0A1V0SAH6	Catovirus	7.9e-11	32.0
WP_061665170.1\|600348_601332_-	glycosyltransferase family 2 protein	A0A1V0SAH6	Catovirus	4.1e-12	34.6
WP_003721506.1\|601353_601737_-	glycerol-3-phosphate cytidylyltransferase	A0A1V0SGE7	Hokovirus	1.4e-16	40.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_LUEQ01000009

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

12707 : 23434

Listeria_phage(40.0%)

tail,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003721739.1\|12707_13160_-	ImmA/IrrE family metallo-endopeptidase	A0A059T7S0	Listeria_phage	4.0e-31	47.9
WP_003721740.1\|13165_13501_-	helix-turn-helix transcriptional regulator	A0A2H4JAR9	uncultured_Caudovirales_phage	4.0e-20	52.5
WP_003732219.1\|13717_14146_+	hypothetical protein	A8ATZ8	Listeria_phage	3.0e-12	45.7
WP_003732220.1\|14157_14574_+	hypothetical protein	NA	NA	NA	NA
WP_003732221.1\|14851_15241_+	DUF5072 family protein	NA	NA	NA	NA
WP_003721744.1\|15253_15766_+\|tail	phage major tail protein, TP901-1 family	A0A097PBF4	Streptococcus_pyogenes_phage	1.2e-47	62.7
WP_003740132.1\|15813_16116_+	hypothetical protein	NA	NA	NA	NA
WP_072217178.1\|16157_16562_+	phenylalanine racemase	A0A097PAX1	Streptococcus_pyogenes_phage	2.4e-19	43.5
WP_061665622.1\|16548_18417_+	hypothetical protein	A0A097PAU2	Streptococcus_pyogenes_phage	3.5e-20	45.8
WP_061665623.1\|18413_19232_+\|tail	phage tail family protein	Q9T1A6	Listeria_phage	3.3e-44	35.5
WP_010989348.1\|19241_20378_+\|tail	phage tail protein	A0A0B5D0G3	Listeria_phage	1.0e-46	33.8
WP_003721751.1\|20367_20667_+	hypothetical protein	NA	NA	NA	NA
WP_061665624.1\|20681_21257_+	hypothetical protein	NA	NA	NA	NA
WP_009931691.1\|21271_21751_+	hypothetical protein	NA	NA	NA	NA
WP_003732226.1\|21747_22284_+	hypothetical protein	NA	NA	NA	NA
WP_003721755.1\|22302_22725_+\|holin	holin family protein	Q2I8E7	Bacillus_phage	1.1e-27	46.3
WP_061665625.1\|22705_23434_+	N-acetylmuramoyl-L-alanine amidase	A0A0N9SGH1	Paenibacillus_phage	1.6e-34	42.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

4. NZ_LUEQ01000003

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_LUEQ01000003_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LUEQ01000003_1

405298-407116

TypeII

Consensus_repeat	Method
GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	PILER-CR
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	CRISPRCasFinder
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	CRT

27 spacers

csn2,cas2,cas1,cas9

The CRISPR arrays of NZ_LUEQ01000003_1

>merge|NZ_LUEQ01000003|1|405298-407116|PILER-CR,CRISPRCasFinder,CRT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACAATCGCGATGGATTTACTTTGTTAGCGATGGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACCCTTCTATGAGTTCATGCTCTACGCCACTGGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACCAAATTATAATACTCACATGATTAGTAACCGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACGGGTTCAATTCCCCCAGATGTATAATGTGAGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACAATCTCTGCACATTCTGTTTCGATGGGAGCGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACATGAACAGGCACAAGCGTTAGGGATAAATCGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACAACCTTATCTCGATATGAAACAGAACTGGAGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACTTTTCCACAGCTTTTTCTTGCGCATCAACGGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACAGCTTCTCTTTCACATAATACGTGGTCATAGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACGAACACTATCTCGATATTCATAATATATGAGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACTTATAGTTTGTTTAAATGAACTTGTTTTCGCGTTTTAGAGCTATGTTCTTTTGAATGCTACCAAAACTAATTATTGATGAATTCCCGGTCAATTGTTGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACATGACGATAAACCTCATCACTAACCTTTGTGTTTTAGAGCTATGTTCTTTTGAATGCTACCAAAACTACACATTAGTAATATAACCAAATAGATCAGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACTGATGGTGAGTTAAGAAAAGTGAAAAAAGAGTTTTAGAGCTATGTTCTTTTGAATGCTACCAAAACATTTCTGCTTGGATTGATTGCGGATTTTCTGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACTAAGTTAGTACAACCGCAACTAGATGCTACGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACTGAAAAAAAGGAAAGTAAGCCAGTTACTTAGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACATATAGATGTGAAAGAAGTCCCGTCTACTTGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACCGTTGGCAAGAAGCCTTTTTTCACTGGTGTGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACCGTATCATCCACAAGCAATGTGACACCTGCGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACAGTTATCAACAAGAAAAGACCTTCTGTGCAGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACGTTAAATCCGCAAAAATCTTCGCTTTCGCTGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACGCGTTGAACCAGAAGGTGGGAAAGAAACACGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACTCTTATTCTGACGCTTTGGCCAAACAATTTGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACCGGTTGTTTGATTATCTTGTGTTGCTTTAAGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACTGTCTGAATGTAGTTGATATCTTTAACTTGGTTTTAGAGATACATTATTCTGAATACCAACACATA

>NZ_LUEQ01000003|1|1|405298-407050|PILER-CR
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	AATCGCGATGGATTTACTTTGTTAGCGATG
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	CCTTCTATGAGTTCATGCTCTACGCCACTG
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	CAAATTATAATACTCACATGATTAGTAACC
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	GGGTTCAATTCCCCCAGATGTATAATGTGA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	AATCTCTGCACATTCTGTTTCGATGGGAGC
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	ATGAACAGGCACAAGCGTTAGGGATAAATC
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	AACCTTATCTCGATATGAAACAGAACTGGA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TTTTCCACAGCTTTTTCTTGCGCATCAACG
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	AGCTTCTCTTTCACATAATACGTGGTCATA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	GAACACTATCTCGATATTCATAATATATGA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TTATAGTTTGTTTAAATGAACTTGTTTTCGC
GTTTTAGAGCTATGTTCTTTTGAATGCTACCAAAAC	TAATTATTGATGAATTCCCGGTCAATTGTT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	ATGACGATAAACCTCATCACTAACCTTTGT
GTTTTAGAGCTATGTTCTTTTGAATGCTACCAAAAC	TACACATTAGTAATATAACCAAATAGATCA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TGATGGTGAGTTAAGAAAAGTGAAAAAAGA
GTTTTAGAGCTATGTTCTTTTGAATGCTACCAAAAC	ATTTCTGCTTGGATTGATTGCGGATTTTCT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TAAGTTAGTACAACCGCAACTAGATGCTAC
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TGAAAAAAAGGAAAGTAAGCCAGTTACTTA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	ATATAGATGTGAAAGAAGTCCCGTCTACTT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	CGTTGGCAAGAAGCCTTTTTTCACTGGTGT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	CGTATCATCCACAAGCAATGTGACACCTGC
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	AGTTATCAACAAGAAAAGACCTTCTGTGCA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	GTTAAATCCGCAAAAATCTTCGCTTTCGCT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	GCGTTGAACCAGAAGGTGGGAAAGAAACAC
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TCTTATTCTGACGCTTTGGCCAAACAATTT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	CGGTTGTTTGATTATCTTGTGTTGCTTTAA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC

>NZ_LUEQ01000003|1|1|405298-407116|CRISPRCasFinder
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	AATCGCGATGGATTTACTTTGTTAGCGATG
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	CCTTCTATGAGTTCATGCTCTACGCCACTG
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	CAAATTATAATACTCACATGATTAGTAACC
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	GGGTTCAATTCCCCCAGATGTATAATGTGA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	AATCTCTGCACATTCTGTTTCGATGGGAGC
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	ATGAACAGGCACAAGCGTTAGGGATAAATC
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	AACCTTATCTCGATATGAAACAGAACTGGA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TTTTCCACAGCTTTTTCTTGCGCATCAACG
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	AGCTTCTCTTTCACATAATACGTGGTCATA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	GAACACTATCTCGATATTCATAATATATGA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TTATAGTTTGTTTAAATGAACTTGTTTTCGC
GTTTTAGAGCTATGTTCTTTTGAATGCTACCAAAAC	TAATTATTGATGAATTCCCGGTCAATTGTT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	ATGACGATAAACCTCATCACTAACCTTTGT
GTTTTAGAGCTATGTTCTTTTGAATGCTACCAAAAC	TACACATTAGTAATATAACCAAATAGATCA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TGATGGTGAGTTAAGAAAAGTGAAAAAAGA
GTTTTAGAGCTATGTTCTTTTGAATGCTACCAAAAC	ATTTCTGCTTGGATTGATTGCGGATTTTCT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TAAGTTAGTACAACCGCAACTAGATGCTAC
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TGAAAAAAAGGAAAGTAAGCCAGTTACTTA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	ATATAGATGTGAAAGAAGTCCCGTCTACTT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	CGTTGGCAAGAAGCCTTTTTTCACTGGTGT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	CGTATCATCCACAAGCAATGTGACACCTGC
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	AGTTATCAACAAGAAAAGACCTTCTGTGCA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	GTTAAATCCGCAAAAATCTTCGCTTTCGCT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	GCGTTGAACCAGAAGGTGGGAAAGAAACAC
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TCTTATTCTGACGCTTTGGCCAAACAATTT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	CGGTTGTTTGATTATCTTGTGTTGCTTTAA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TGTCTGAATGTAGTTGATATCTTTAACTTG
GTTTTAGAGATACATTATTCTGAATACCAACACATA

>NZ_LUEQ01000003|1|1|405298-407116|CRT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	AATCGCGATGGATTTACTTTGTTAGCGATG
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	CCTTCTATGAGTTCATGCTCTACGCCACTG
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	CAAATTATAATACTCACATGATTAGTAACC
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	GGGTTCAATTCCCCCAGATGTATAATGTGA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	AATCTCTGCACATTCTGTTTCGATGGGAGC
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	ATGAACAGGCACAAGCGTTAGGGATAAATC
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	AACCTTATCTCGATATGAAACAGAACTGGA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TTTTCCACAGCTTTTTCTTGCGCATCAACG
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	AGCTTCTCTTTCACATAATACGTGGTCATA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	GAACACTATCTCGATATTCATAATATATGA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TTATAGTTTGTTTAAATGAACTTGTTTTCGC
GTTTTAGAGCTATGTTCTTTTGAATGCTACCAAAAC	TAATTATTGATGAATTCCCGGTCAATTGTT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	ATGACGATAAACCTCATCACTAACCTTTGT
GTTTTAGAGCTATGTTCTTTTGAATGCTACCAAAAC	TACACATTAGTAATATAACCAAATAGATCA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TGATGGTGAGTTAAGAAAAGTGAAAAAAGA
GTTTTAGAGCTATGTTCTTTTGAATGCTACCAAAAC	ATTTCTGCTTGGATTGATTGCGGATTTTCT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TAAGTTAGTACAACCGCAACTAGATGCTAC
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TGAAAAAAAGGAAAGTAAGCCAGTTACTTA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	ATATAGATGTGAAAGAAGTCCCGTCTACTT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	CGTTGGCAAGAAGCCTTTTTTCACTGGTGT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	CGTATCATCCACAAGCAATGTGACACCTGC
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	AGTTATCAACAAGAAAAGACCTTCTGTGCA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	GTTAAATCCGCAAAAATCTTCGCTTTCGCT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	GCGTTGAACCAGAAGGTGGGAAAGAAACAC
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TCTTATTCTGACGCTTTGGCCAAACAATTT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	CGGTTGTTTGATTATCTTGTGTTGCTTTAA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TGTCTGAATGTAGTTGATATCTTTAACTTG
GTTTTAGAGATACATTATTCTGAATACCAACACATA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LUEQ01000003.1\|WP_023548322.1\|398319_398799_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LUEQ01000003.1\|WP_003727703.1\|397282_397720_+\|50S-ribosomal-protein-L13	unknown	unknown	gnl\|CDD\|181703
NZ_LUEQ01000003.1\|WP_061665473.1\|408588_409440_+\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381359
NZ_LUEQ01000003.1\|WP_061665474.1\|409480_411007_-\|GW-domain-containing-glycosaminoglycan-binding-protein	unknown	unknown	gnl\|CDD\|224619
NZ_LUEQ01000003.1\|WP_003723649.1\|403312_404179_+\|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|187851
NZ_LUEQ01000003.1\|WP_014601168.1\|407663_408023_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LUEQ01000003.1\|WP_003733033.1\|395538_396336_+\|energy-coupling-factor-transporter-transmembrane-protein-EcfT	unknown	unknown	gnl\|CDD\|223692
NZ_LUEQ01000003.1\|WP_061665472.1\|399307_403312_+\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	COG3513_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226044
NZ_LUEQ01000003.1\|WP_003723648.1\|404175_404517_+\|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226043
NZ_LUEQ01000003.1\|WP_003723642.1\|411275_412304_+\|Mrp/NBP35-family-ATP-binding-protein	unknown	unknown	gnl\|CDD\|378455
NZ_LUEQ01000003.1\|WP_003733032.1\|396341_397088_+\|tRNA-pseudouridine(38-40)-synthase-TruA	unknown	unknown	gnl\|CDD\|234577
NZ_LUEQ01000003.1\|WP_003734937.1\|408144_408567_+\|MerR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|133384
NZ_LUEQ01000003.1\|WP_031665336.1\|404506_405169_+\|type-II-A-CRISPR-associated-protein-Csn2	csn2	cd09758_csn2_CAS-II-A	gnl\|CDD\|213408
NZ_LUEQ01000003.1\|WP_061665471.1\|394669_395536_+\|energy-coupling-factor-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|237454
NZ_LUEQ01000003.1\|WP_003723652.1\|397741_398134_+\|30S-ribosomal-protein-S9	unknown	unknown	gnl\|CDD\|178888

Protein	Function_ID	Function_description	E-value
NZ_LUEQ01000003.1\|WP_003727703.1\|397282_397720_+\|50S-ribosomal-protein-L13	gnl\|CDD\|181703	PRK09216, rplM, 50S ribosomal protein L13; Reviewed.	2.08607e-102
NZ_LUEQ01000003.1\|WP_061665474.1\|409480_411007_-\|GW-domain-containing-glycosaminoglycan-binding-protein	gnl\|CDD\|224619	COG1705, FlgJ, Muramidase (flagellum-specific) [Cell motility and secretion / Intracellular trafficking and secretion].	3.09526e-69
NZ_LUEQ01000003.1\|WP_003723649.1\|403312_404179_+\|type-II-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|187851	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer intergration. Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	3.51602e-136
NZ_LUEQ01000003.1\|WP_003733033.1\|395538_396336_+\|energy-coupling-factor-transporter-transmembrane-protein-EcfT	gnl\|CDD\|223692	COG0619, CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters [Inorganic ion transport and metabolism].	5.34175e-53
NZ_LUEQ01000003.1\|WP_061665473.1\|408588_409440_+\|aldo/keto-reductase	gnl\|CDD\|381359	cd19133, AKR_AKR5F1, the AKR5F family of aldo-keto reductase (AKR). Klebsiella sp. 2,5-diketo-D-gluconic acid reductase (2,5-DKG reductase) is a founding member of aldo-keto reductase family 5 member F1 (AKR5F1). It catalyzes the reduction of 2,5-diketo-D-gluconic acid (25DKG) to 2-keto-L-gulonic acid (2KLG).	4.55779e-171
NZ_LUEQ01000003.1\|WP_003723648.1\|404175_404517_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	2.60762e-45
NZ_LUEQ01000003.1\|WP_061665472.1\|399307_403312_+\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	gnl\|CDD\|226044	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms].	0
NZ_LUEQ01000003.1\|WP_003723642.1\|411275_412304_+\|Mrp/NBP35-family-ATP-binding-protein	gnl\|CDD\|378455	pfam10609, ParA, NUBPL iron-transfer P-loop NTPase. This family contains ATPases involved in plasmid partitioning. It also contains the cytosolic Fe-S cluster assembling factor NBP35 which is required for biogenesis and export of both ribosomal subunits.	4.13281e-115
NZ_LUEQ01000003.1\|WP_003733032.1\|396341_397088_+\|tRNA-pseudouridine(38-40)-synthase-TruA	gnl\|CDD\|234577	PRK00021, truA, tRNA pseudouridine(38-40) synthase TruA.	2.82266e-128
NZ_LUEQ01000003.1\|WP_003734937.1\|408144_408567_+\|MerR-family-transcriptional-regulator	gnl\|CDD\|133384	cd01109, HTH_YyaN, Helix-Turn-Helix DNA binding domain of the MerR-like transcription regulators YyaN and YraB. Putative helix-turn-helix (HTH) MerR-like transcription regulators of Bacillus subtilis, YyaN and YraB, and related proteins; N-terminal domain. Based on sequence similarity, these proteins are predicted to function as transcription regulators that mediate responses to stress in eubacteria. They belong to the MerR superfamily of transcription regulators that promote transcription of various stress regulons by reconfiguring the operator sequence located between the -35 and -10 promoter elements. A typical MerR regulator is comprised of distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their N-terminal domains are homologous and contain a DNA-binding winged HTH motif, while the C-terminal domains are often dissimilar and bind specific coactivator molecules such as metal ions, drugs, and organic substrates.	5.12858e-42
NZ_LUEQ01000003.1\|WP_031665336.1\|404506_405169_+\|type-II-A-CRISPR-associated-protein-Csn2	gnl\|CDD\|213408	cd09758, Csn2, CRISPR/Cas system-associated protein Csn2. Csn2 is a Nmeni subtype-specific Cas protein, which may function in the adaptation process which mediates the incorporation of foreign nucleic acids into the microbial host genome. Csn 2 may interact directly with double-stranded DNA. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA. Csn2 has been predicted to be a functional analog of Cas4 based on anti-correlated phyletic patterns; also known as SPy1049 family.	1.32326e-114
NZ_LUEQ01000003.1\|WP_061665471.1\|394669_395536_+\|energy-coupling-factor-ABC-transporter-ATP-binding-protein	gnl\|CDD\|237454	PRK13634, cbiO, cobalt transporter ATP-binding subunit; Provisional.	0
NZ_LUEQ01000003.1\|WP_003723652.1\|397741_398134_+\|30S-ribosomal-protein-S9	gnl\|CDD\|178888	PRK00132, rpsI, 30S ribosomal protein S9; Reviewed.	4.44953e-85

>NZ_LUEQ01000003.1|WP_031665336.1|404506_405169_+|type-II-A-CRISPR-associated-protein-Csn2
MNFNFKLLDDPIQIEDSTIFVIEDVRVFANVTRFFYQYEETEELTIFDAKHQPLKSSELMLITDVLGHDINSAATLKLIYADLEQQLNEKPEVKSMIDKLTATISELIGYELLEHELDLEEDEITVIELFKALGIKIETKSDTVFEKLIEIVQVYKYLSKKKLLVLINVCSYLTEEELLELRRYISLYQVKVLFIEPRKIKGSPQVTLDSDYFLHVENSV
>NZ_LUEQ01000003.1|WP_003723648.1|404175_404517_+|CRISPR-associated-endonuclease-Cas2
MSYRYMRMLLMFDMPTDTAKERKAYRQFRRFILSEGFIMHQYSVYSKILLNGTASKAMLARLKQQNPKKGLITLLTVTEKQFARMVYLSGEQNKSIGNSDARLVFLGDDADEF
>NZ_LUEQ01000003.1|WP_003723649.1|403312_404179_+|type-II-CRISPR-associated-endonuclease-Cas1
MGWRTVVVNSHSKLSYKNQHLVFKSAYQQEMIHLSEIDVLILETTDITLTTMLINCLVAENILILFCDDKRLPIGKVLPFYGRHDSSLQLTKQLEWEAELKAAVWTEIISQKILNQSTYLSMLNYDEKASSLINLHETLAVFDPTNREGHAARIYFNQLFGNDFTREQENDINSGLNYGYTLLLSVFARELVKSGCMTQFGLKHANQFNDFNLASDLMEPFRPLVDQIVYEKRNEDFQVIKRSLFELFTKQFDYNDQHMFLTNIASDYTKKIVKVLNEEREGVPEFRI
>NZ_LUEQ01000003.1|WP_061665472.1|399307_403312_+|type-II-CRISPR-RNA-guided-endonuclease-Cas9
MKNPYTIGLDIGTNSVGWAVLTNQYDLVKRKMKVAGNSDKKQIKKNFWGVRLFDDGQTAVDRRMNRTARRRIERRRNRISYLQEIFAVEMANIDANFFCRLNDSFYVDSEKRNSRHPFFATIEEEVAYHDNYRTIYHLREELVNSSEKADLRLVYLALAHIIKYRGNFLIEGALDTKNTSVDGVYEQFIQTYNQVFMSNIEEGTLAKVEENIEVANILAGKFTRREKFERILQLYPGEKSTGMFAQFISLIVGSKGNFQKVFDLIEKTDIECAKDSYEEDLETLLAIIGDEYAELFVAAKNTYNAVVLSSIITVTDTETNAKLSASMIERFDAHEKDLVELKAFIKLNLPKQYEEIFSNAAIDGYAGYIDGKTKQVDFYKYLKTILENIEGSDYFIAKIEEENFLRKQRTFDNGAIPHQLHLEELEAIIHQQAKYYTFLKEDYDKIKSLVTFRIPYFVGPLANGQSGFAWLTRKADGEIRPWNIEEKVDFGKSAVDFIEKMTNKDTYLPKENVLPKHSLCYQKYMVYNELTKIRYIDDQGKTNYFSGREKQQIFNDLFKQKRKVKNKDLELFLRNINHIESPTIEGLEDSFNASYATYHDLLKVGMKQEILDNPLNTEMLEDIVKILTVFEDKRMIKEQLQQFSDVLDGVVLKKLERRHYTGWGRLSAKLLVGIREKQSHLTILDYLMNDDGLNRNLMQLINDSNLSFKSIIEKEQVSTTDKDLQSIVAELAGSPAIKKGILQSLKIVDELVSIMGYPPQTIVVEMARENQTTGKGKNNSKPRYKSLEKAIKEFGSKILKEHPTDNQELKNNRLYLYYLQNGKDMYTGQELDIHNLSNYDIDHIVPQSFITDNSIDNLVLTSSAGNREKGGDVPPLEIVRKRKVFWEKLYQGNLMSKRKFDYLTKAERGGLTDADKARFIHRQLVETRQITKNVANILHQRFNNETDNHGNTMEQVRIVTLKSALVSQFRKQFQLYKVREVNDYHHAHDAYLNGVVANTLLKVYPQLEPEFVYGEYHQFDWFKANKATAKKQFYTNIMLFFGQKERIIDENGEILWDKKYLETIKKVLDYRQMNIVKKTEIQKGEFSKATIKPKGNSSKLIPRKENWDPMKYGGLDSPNMAYAVIIEHAKGKKKLIFEKKIIRITIMERKMFEKDEEAFLEEKGYRHPKVLTKLPKYTLYECEKGRRRMLASANEAQKGNQLVLSNHLVSLLYHAKNCEASDGKSLKYIEAHRETFSELLAQVSEFATRYTLADANLSKINNLFEQNKEGDIKAIAQSFVDLMAFNAMGAPASFKFFEATIDRKRYTNLKELLSSTIIYQSITGLYESRKRLDD
>NZ_LUEQ01000003.1|WP_023548322.1|398319_398799_+|hypothetical-protein
MKSLIIHKMHSSYFTNMSEVFNLLPEGELNCMWLVSSYECNIYPSEQIPFDKDYVWLKGTKLKEILNQKEIMFIWGNFTSYSSDTELKDVLKYLIPFADGNKDLWGKNVQLSNPLSNTELISWDSSIFLALSKNTSIIELLKANYPDSEDLSMYNSDID
>NZ_LUEQ01000003.1|WP_003723652.1|397741_398134_+|30S-ribosomal-protein-S9
MAQVQYYGTGRRKSSVARVRLVPGDGKIVINNRDWEDYIPFAALREVIKQPLVATETLGNYDVLVNVHGGGYTGQAGAIRHGVARALLQVAPEYRPALKSAGLLTRDSRMKERKKPGLKGARRAPQFSKR
>NZ_LUEQ01000003.1|WP_003727703.1|397282_397720_+|50S-ribosomal-protein-L13
MRTTYMAKPGEVERKWYVIDATGVSLGRLSSEVASILRGKNKPQFTPHIDTGDFVIIINAGKIGLTGKKATDKIYYRHSQYPGGLKSRTAGEMRTNNPEKLLELSIKGMLPKNSLGRQLFKKLHVYGGSEHEHAAQQPEVYELRG
>NZ_LUEQ01000003.1|WP_003733032.1|396341_397088_+|tRNA-pseudouridine(38-40)-synthase-TruA
MTRYKAIISYDGSGFYGYQVQPNTRTVQAEIEKALTKMHKGKTVRVTASGRTDTGVHAKGQVIHFDSELDITAEKFQKALQVMTPFDISFLTVEEVPDDFHARFGTVGKEYRYVVKRTKIFDPFSRNFALHYPYELDISKMKLASKRLIGEHDFTSFCSARTERDSKVRTLYSIDFYEEDDETLVIAFQGNGFLYNMVRILTGTLLDAGQGRISPDDISEALLARDRQKLISKTAPPQGLYLWRVDYE
>NZ_LUEQ01000003.1|WP_003733033.1|395538_396336_+|energy-coupling-factor-transporter-transmembrane-protein-EcfT
MMDKMILGRYIPGNSWLHRIDPRAKITAVMAFIAIVFLANNWLTYALMFVYVLYLVLTSKVPFLFFIKGLQPIFWLILITLLLQVFFTKGGTVLVDLGLLQITTLGLANGAMMFCRFVLIIFMTTLLTLTTSPIELTDGLEKILAPFRLVHLPVHELALMLSISLRFIPTLMDETEKILKAQKARGVEFTSGKWSDRIKAIIPLLVPLFISAFKRAEDLAIAMEARGYRGGKGRTRFRLLRWRFADTFLLISLAVLSGLLFWLRS
>NZ_LUEQ01000003.1|WP_061665471.1|394669_395536_+|energy-coupling-factor-ABC-transporter-ATP-binding-protein
MEIKLEQLGYCYQKNSPFEKRALLDVNVSFDSGSYSAIIGHTGSGKSTLLQHLNALLMPTEGKITVGDREIVAGVKQKKLRDLRKKVGIVFQFPEAQLFEETVEKDICFGPMNFGVSEEDAKLRARKVIYEVGLTEEILSRSPFELSGGQMRRVAIAGVLAMDPEVLVLDEPTAGLDPHGREEIMEMFYNLHKEKGLTTVLVTHSMEDAARYAEKIVLMKAGTVLQIGTPREIFAKPDELVDLGLSVPDVVRFQGLFERKFDVKLTKTCLTIDELTSEMAPYLAKGGA
>NZ_LUEQ01000003.1|WP_014601168.1|407663_408023_+|hypothetical-protein
MKKTSIIFILCALLSITACSNTENETQATEATGTIEQVETDAILINNFKEKKDKYNPEAAIRFDIVDKYYDETGNKIKITDLNKNDDVKIILTNDFPIRETNPAQIDPKYVQKIIRLNK
>NZ_LUEQ01000003.1|WP_003734937.1|408144_408567_+|MerR-family-transcriptional-regulator
MNIKQAADMFGLTVDTLRYYERVGVIPPVHRNESGYRDYKTSDLNWVYLVKNLRNAGLSVESLIEFATLAQLRETQNVEAAQKQVLVDQLKELDEKLAEMKKVRELLVYKIDSYDSHIAQFKAGELNADNVEKLWERDKF
>NZ_LUEQ01000003.1|WP_061665473.1|408588_409440_+|aldo/keto-reductase
MKIVKLNNGVEVPILGFGTYQITDAAEAEQAVKDAIKTGYRHIDTAQSYMNEEAVGSGISASGVDRKELFITTKIWVENVSYKGVMSSFDRSLKRLGLDYIDLLLIHQPFNDVYGAWIAMEELQASGKIRAIGVSNFSPDRVIDLAAFNEVTPQVNQIEVNPFQQQTANLAILRKEGVAIEAWAPFAEGKNDIFNNPVLTKIGAKYGKSAAQVILRWLVEQDIIVLAKSVKPERMAQNLAIFDFELTEADKEEIASLDQGESQFFSHADPEMVKWMASRKLNV
>NZ_LUEQ01000003.1|WP_061665474.1|409480_411007_-|GW-domain-containing-glycosaminoglycan-binding-protein
MDRKFIKPGIILLIVAFLVVSINVGAETGGSRTAQVNLTTSQQAFIDEILPAAQDGYRDGKLLTSVTLAQAILESNWGESGLSQNSNNLFGIKGTYKGKSVSMGTMEASGSTTANFRVYPSWKESIEDHTALITENARYQDAVGETNYRKALQAIKDGGYATDPDYVSKLVAIIERYNLDKYDVIYDKIESNQSLAAIGTVAENKEQEVIWSAPYNTENANKIGTLENYSGRNLEISWEAKTEKGLWYFIRENNKDIGWINSNALKISYHQKEDENVHLTKYVDDLSAHVYRLPSPEKQFDNGTIAKYDRKALEADKKITRGGYAWFRISEGEKVIGWVRADKLNDRLYDRITEQTSYDGYALVSKSATDNVWTAPFNTKNAEKLAPLADYDNEKLELVTRAKAGNTLWYQFKVDGKLVGWASEKDLNVFYTPAKEEPVKQVAYVKDPTAKLYNKPVESTSTNPKAVGFYYGKLLAVDKTATILGEDWLHLKDRQNSLGWIKAIDINS
>NZ_LUEQ01000003.1|WP_003723642.1|411275_412304_+|Mrp/NBP35-family-ATP-binding-protein
MLNEQQITRLLYRLQDPVLEASLEETEGVLEVQVLEETANIKIALADPAVETDHFVHNIEELLTQFGVNEINIELEYLPAAVIDRIFQARDNILSEASETKFLAIASGKGGVGKSTVSANLAIALAQQGKKVGLLDADIYGFSIPVLLGTTESPHKENGQIIPVETHGIQMISMDFFVEQGEPVIWRGPMLGKMIKMFLEEVRWGKLDYLLIDLPPGTGDVALDIHTLIPKCNELIVTTPHYAAASVASRAGYMAAKNNHKIIGVIENMSYLTLADGQVLKVFGQGGGEKVAADLETQLLIQLPIEQPEPNGNGYVSALFNSSSTSGKAYKTLAEKIIPCLS

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Identity
NZ_LUEQ01000003_1	1.8\|405796\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	405796-405825	30	NZ_LUEQ01000004.1	122794-122823	1.0
NZ_LUEQ01000003_1	1.10\|405928\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	405928-405957	30	NZ_LUEQ01000011.1	44982-45011	1.0
NZ_LUEQ01000003_1	1.15\|406259\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406259-406288	30	NZ_LUEQ01000004.1	119720-119749	1.0

1. spacer 1.8|405796|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to position: 122794-122823, mismatch: 0, identity: 1.0

ttttccacagctttttcttgcgcatcaacg	CRISPR spacer
ttttccacagctttttcttgcgcatcaacg	Protospacer
******************************

2. spacer 1.10|405928|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to position: 44982-45011, mismatch: 0, identity: 1.0

gaacactatctcgatattcataatatatga	CRISPR spacer
gaacactatctcgatattcataatatatga	Protospacer
******************************

3. spacer 1.15|406259|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to position: 119720-119749, mismatch: 0, identity: 1.0

tgatggtgagttaagaaaagtgaaaaaaga	CRISPR spacer
tgatggtgagttaagaaaagtgaaaaaaga	Protospacer
******************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_LUEQ01000003_1	1.7\|405730\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	405730-405759	30	NZ_LR134403	Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence	217617-217646	0	1.0
NZ_LUEQ01000003_1	1.7\|405730\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	405730-405759	30	KJ094023	Listeria phage LP-101, complete genome	8090-8119	0	1.0
NZ_LUEQ01000003_1	1.11\|405994\|31\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	405994-406024	31	KJ094023	Listeria phage LP-101, complete genome	13547-13577	0	1.0
NZ_LUEQ01000003_1	1.24\|406853\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406853-406882	30	NC_009813	Listeria phage B054, complete genome	2110-2139	0	1.0
NZ_LUEQ01000003_1	1.25\|406919\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406919-406948	30	MH341453	Listeria phage PSU-VKH-LP041, complete genome	1182-1211	0	1.0
NZ_LUEQ01000003_1	1.25\|406919\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406919-406948	30	NC_009813	Listeria phage B054, complete genome	1182-1211	0	1.0
NZ_LUEQ01000003_1	1.11\|405994\|31\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	405994-406024	31	NZ_LR134403	Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence	223074-223104	1	0.968
NZ_LUEQ01000003_1	1.17\|406391\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406391-406420	30	JB137888	Sequence 7 from Patent WO2012159774	8073-8102	1	0.967
NZ_LUEQ01000003_1	1.17\|406391\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406391-406420	30	KJ094024	Listeria phage LP-032 contig 1, partial genome	3835-3864	1	0.967
NZ_LUEQ01000003_1	1.17\|406391\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406391-406420	30	MN128593	Listeria phage LP-031, complete genome	39067-39096	1	0.967
NZ_LUEQ01000003_1	1.17\|406391\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406391-406420	30	NC_021787	Listeria phage LP-037, complete genome	62196-62225	1	0.967
NZ_LUEQ01000003_1	1.17\|406391\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406391-406420	30	JX442241	Listeria phage P70, complete genome	46141-46170	1	0.967
NZ_LUEQ01000003_1	1.17\|406391\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406391-406420	30	KJ094020	Listeria phage LP-026, complete genome	22291-22320	1	0.967
NZ_LUEQ01000003_1	1.24\|406853\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406853-406882	30	MH341453	Listeria phage PSU-VKH-LP041, complete genome	2110-2139	1	0.967
NZ_LUEQ01000003_1	1.13\|406127\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406127-406156	30	KJ094028	Listeria phage LP-083-1 contig 2, partial genome	9857-9886	2	0.933
NZ_LUEQ01000003_1	1.13\|406127\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406127-406156	30	DQ003641	Listeria phage P35, complete genome	25979-26008	2	0.933
NZ_LUEQ01000003_1	1.17\|406391\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406391-406420	30	MH299806	Listeria phage LP-KV022, complete genome	44791-44820	2	0.933
NZ_LUEQ01000003_1	1.17\|406391\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406391-406420	30	MN114083	Listeria phage LP-013, complete genome	39829-39858	2	0.933
NZ_LUEQ01000003_1	1.17\|406391\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406391-406420	30	NC_021785	Listeria phage LP-110, complete genome	2509-2538	2	0.933
NZ_LUEQ01000003_1	1.17\|406391\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406391-406420	30	MN904502	Listeria phage LP-018, complete genome	39282-39311	2	0.933
NZ_LUEQ01000003_1	1.17\|406391\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406391-406420	30	KJ094021	Listeria phage LP-114, complete genome	29501-29530	2	0.933
NZ_LUEQ01000003_1	1.17\|406391\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406391-406420	30	MN114082	Listeria phage LP-010, complete genome	39052-39081	2	0.933
NZ_LUEQ01000003_1	1.19\|406523\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406523-406552	30	MH299806	Listeria phage LP-KV022, complete genome	50960-50989	2	0.933
NZ_LUEQ01000003_1	1.19\|406523\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406523-406552	30	MN114083	Listeria phage LP-013, complete genome	46481-46510	2	0.933
NZ_LUEQ01000003_1	1.19\|406523\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406523-406552	30	NC_021785	Listeria phage LP-110, complete genome	8678-8707	2	0.933
NZ_LUEQ01000003_1	1.19\|406523\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406523-406552	30	MN904502	Listeria phage LP-018, complete genome	45935-45964	2	0.933
NZ_LUEQ01000003_1	1.19\|406523\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406523-406552	30	MN114082	Listeria phage LP-010, complete genome	45766-45795	2	0.933
NZ_LUEQ01000003_1	1.27\|407051\|30\|NZ_LUEQ01000003\|CRISPRCasFinder,CRT	407051-407080	30	DQ003637	Listeria phage A500, complete genome	37232-37261	2	0.933
NZ_LUEQ01000003_1	1.27\|407051\|30\|NZ_LUEQ01000003\|CRISPRCasFinder,CRT	407051-407080	30	KJ094022	Listeria phage LP-030-3, complete genome	6787-6816	2	0.933
NZ_LUEQ01000003_1	1.11\|405994\|31\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	405994-406024	31	MT500540	Listeria phage LP-HM00113468, complete genome	31377-31407	3	0.903
NZ_LUEQ01000003_1	1.19\|406523\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406523-406552	30	JB137888	Sequence 7 from Patent WO2012159774	2358-2387	3	0.9
NZ_LUEQ01000003_1	1.19\|406523\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406523-406552	30	KJ094026	Listeria phage LP-032 contig 3, partial genome	11878-11907	3	0.9
NZ_LUEQ01000003_1	1.19\|406523\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406523-406552	30	MN128593	Listeria phage LP-031, complete genome	45776-45805	3	0.9
NZ_LUEQ01000003_1	1.19\|406523\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406523-406552	30	NC_021787	Listeria phage LP-037, complete genome	3144-3173	3	0.9
NZ_LUEQ01000003_1	1.19\|406523\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406523-406552	30	JX442241	Listeria phage P70, complete genome	52395-52424	3	0.9
NZ_LUEQ01000003_1	1.19\|406523\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406523-406552	30	KJ094020	Listeria phage LP-026, complete genome	29295-29324	3	0.9
NZ_LUEQ01000003_1	1.19\|406523\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406523-406552	30	KJ094021	Listeria phage LP-114, complete genome	36486-36515	3	0.9
NZ_LUEQ01000003_1	1.17\|406391\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406391-406420	30	NZ_CP026685	Nostoc sp. 'Peltigera membranacea cyanobiont' N6 plasmid pNPM3, complete sequence	4794-4823	5	0.833
NZ_LUEQ01000003_1	1.26\|406985\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406985-407014	30	MK250019	Prevotella phage Lak-A2, complete genome	528634-528663	6	0.8
NZ_LUEQ01000003_1	1.2\|405400\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	405400-405429	30	NZ_CP030856	Runella sp. HYN0085 plasmid unnamed6, complete sequence	45113-45142	7	0.767
NZ_LUEQ01000003_1	1.9\|405862\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	405862-405891	30	MT657337	Microbacterium phage Mazun, complete genome	46571-46600	7	0.767
NZ_LUEQ01000003_1	1.10\|405928\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	405928-405957	30	NC_041887	Rhodococcus phage Weasels2, complete genome	68085-68114	7	0.767
NZ_LUEQ01000003_1	1.13\|406127\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406127-406156	30	NZ_LN907828	Erwinia gerundensis isolate E_g_EM595 plasmid pEM01, complete sequence	393511-393540	7	0.767
NZ_LUEQ01000003_1	1.15\|406259\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406259-406288	30	NZ_CP044104	Streptococcus dysgalactiae strain FDAARGOS_654 plasmid unnamed2, complete sequence	1738-1767	7	0.767
NZ_LUEQ01000003_1	1.15\|406259\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406259-406288	30	NZ_KJ951051	Streptococcus dysgalactiae subsp. equisimilis strain G279 plasmid pG279, complete sequence	1643-1672	7	0.767
NZ_LUEQ01000003_1	1.18\|406457\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406457-406486	30	MT786458	Staphylococcus phage vB_SauH_SAP1, complete genome	13305-13334	7	0.767
NZ_LUEQ01000003_1	1.18\|406457\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406457-406486	30	MG557618	Staphylococcus phage HSA30, complete genome	130982-131011	7	0.767
NZ_LUEQ01000003_1	1.18\|406457\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406457-406486	30	LR215718	Staphylococcus phage Stab20 genome assembly, chromosome: I	33071-33100	7	0.767
NZ_LUEQ01000003_1	1.18\|406457\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406457-406486	30	MT080601	UNVERIFIED: Staphylococcus phage vB_SauM_EW72, complete genome	141595-141624	7	0.767
NZ_LUEQ01000003_1	1.18\|406457\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406457-406486	30	MT080585	UNVERIFIED: Staphylococcus phage vB_SauM_EW18, complete genome	29760-29789	7	0.767
NZ_LUEQ01000003_1	1.18\|406457\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406457-406486	30	MT787017	UNVERIFIED: Staphylococcus phage WV, complete genome	112614-112643	7	0.767
NZ_LUEQ01000003_1	1.18\|406457\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406457-406486	30	KY779849	Staphylococcus phage qdsa002, complete genome	36242-36271	7	0.767
NZ_LUEQ01000003_1	1.18\|406457\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406457-406486	30	MF001365	Staphylococcus phage SA3, partial genome	5717-5746	7	0.767
NZ_LUEQ01000003_1	1.18\|406457\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406457-406486	30	MH159197	Staphylococcus phage VB_SavM_JYL01, complete genome	5809-5838	7	0.767
NZ_LUEQ01000003_1	1.18\|406457\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406457-406486	30	MN304941	Staphylococcus phage vB_SauH_IME522, complete genome	6530-6559	7	0.767
NZ_LUEQ01000003_1	1.18\|406457\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406457-406486	30	MK250904	Staphylococcus phage VB-SavM-JYL02, complete genome	4381-4410	7	0.767
NZ_LUEQ01000003_1	1.18\|406457\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406457-406486	30	KY794643	Staphylococcus phage vB_Sau_S24, complete genome	130952-130981	7	0.767
NZ_LUEQ01000003_1	1.18\|406457\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406457-406486	30	MT080591	UNVERIFIED: Staphylococcus phage vB_SauM_EW29, complete genome	26296-26325	7	0.767
NZ_LUEQ01000003_1	1.18\|406457\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406457-406486	30	LR215721	Staphylococcus phage Stab22 genome assembly, chromosome: I	34368-34397	7	0.767
NZ_LUEQ01000003_1	1.18\|406457\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406457-406486	30	LR215720	Staphylococcus phage Stab23 genome assembly, chromosome: I	31739-31768	7	0.767
NZ_LUEQ01000003_1	1.18\|406457\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406457-406486	30	KM216423	Staphylococcus phage P108, complete genome	111736-111765	7	0.767
NZ_LUEQ01000003_1	1.18\|406457\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406457-406486	30	NC_028765	Staphylococcus phage phiIPLA-RODI, complete genome	25234-25263	7	0.767
NZ_LUEQ01000003_1	1.18\|406457\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406457-406486	30	MT080589	UNVERIFIED: Staphylococcus phage vB_SauM_EW26, complete genome	10576-10605	7	0.767
NZ_LUEQ01000003_1	1.18\|406457\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406457-406486	30	KY794642	Staphylococcus phage vB_Sau_Clo6, complete genome	133233-133262	7	0.767
NZ_LUEQ01000003_1	1.18\|406457\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406457-406486	30	NC_019448	Staphylococcus phage GH15, complete genome	32873-32902	7	0.767
NZ_LUEQ01000003_1	1.20\|406589\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406589-406618	30	DQ123818	Actinomyces phage Av-1, complete genome	1182-1211	7	0.767
NZ_LUEQ01000003_1	1.24\|406853\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406853-406882	30	NC_048855	Phage NBEco002, complete genome	99824-99853	7	0.767
NZ_LUEQ01000003_1	1.24\|406853\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406853-406882	30	NC_017969	Escherichia phage bV_EcoS_AKFV33, complete genome	99958-99987	7	0.767
NZ_LUEQ01000003_1	1.24\|406853\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406853-406882	30	NC_024139	Escherichia phage vB_EcoS_FFH1, complete genome	99882-99911	7	0.767
NZ_LUEQ01000003_1	1.24\|406853\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406853-406882	30	MN022787	Salmonella virus VSe12, complete genome	101179-101208	7	0.767
NZ_LUEQ01000003_1	1.27\|407051\|30\|NZ_LUEQ01000003\|CRISPRCasFinder,CRT	407051-407080	30	KT878766	Staphylococcus phage P1105, complete genome	32141-32170	7	0.767
NZ_LUEQ01000003_1	1.27\|407051\|30\|NZ_LUEQ01000003\|CRISPRCasFinder,CRT	407051-407080	30	NC_025460	Staphylococcus phage phiSa119, complete genome	7352-7381	7	0.767
NZ_LUEQ01000003_1	1.6\|405664\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	405664-405693	30	NZ_CP050268	Salinivibrio costicola strain M318 plasmid pM138.1, complete sequence	51733-51762	8	0.733
NZ_LUEQ01000003_1	1.11\|405994\|31\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	405994-406024	31	MG945160	UNVERIFIED: Microviridae sp. isolate 396-1801, complete genome	5604-5634	8	0.742
NZ_LUEQ01000003_1	1.13\|406127\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406127-406156	30	MH572283	Microviridae sp. isolate SD_SC_54, complete genome	4081-4110	8	0.733
NZ_LUEQ01000003_1	1.15\|406259\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406259-406288	30	NZ_AP017978	Neochlamydia sp. S13 plasmid pS13, complete sequence	91936-91965	8	0.733
NZ_LUEQ01000003_1	1.17\|406391\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406391-406420	30	MN694584	Marine virus AFVG_250M353, complete genome	28684-28713	8	0.733
NZ_LUEQ01000003_1	1.18\|406457\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406457-406486	30	NZ_CP013354	Clostridium butyricum strain JKY6D1 plasmid, complete sequence	390-419	8	0.733
NZ_LUEQ01000003_1	1.18\|406457\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406457-406486	30	NC_012760	Clostridium butyricum plasmid pCBM588 DNA, complete sequence, strain: MIYAIRI 588	7606-7635	8	0.733
NZ_LUEQ01000003_1	1.18\|406457\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406457-406486	30	CP016334	Clostridium butyricum strain TK520 plasmid, complete sequence	775-804	8	0.733
NZ_LUEQ01000003_1	1.18\|406457\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406457-406486	30	NZ_CP013240	Clostridium butyricum strain CDC_51208 plasmid pNPD4_1, complete sequence	2747-2776	8	0.733
NZ_LUEQ01000003_1	1.18\|406457\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406457-406486	30	NZ_AP019718	Clostridium butyricum strain NBRC 13949 plasmid pCBU2, complete sequence	2864-2893	8	0.733
NZ_LUEQ01000003_1	1.18\|406457\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406457-406486	30	NZ_CP014706	Clostridium butyricum strain TOA plasmid, complete sequence	4864-4893	8	0.733
NZ_LUEQ01000003_1	1.18\|406457\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406457-406486	30	MN539736	UNVERIFIED: Staphylococcus phage vB_SauM-A, complete genome	130660-130689	8	0.733
NZ_LUEQ01000003_1	1.18\|406457\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406457-406486	30	KY581279	Staphylococcus phage pSa-3, complete genome	28355-28384	8	0.733
NZ_LUEQ01000003_1	1.18\|406457\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406457-406486	30	MT411892	Staphylococcus phage Metroid, complete genome	30260-30289	8	0.733
NZ_LUEQ01000003_1	1.18\|406457\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406457-406486	30	KJ206562	Staphylococcus phage 812 isolate host-range mutant 812F1, complete genome	31174-31203	8	0.733
NZ_LUEQ01000003_1	1.18\|406457\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406457-406486	30	AP018375	Staphylococcus phage phiSA039 DNA, complete genome	22186-22215	8	0.733
NZ_LUEQ01000003_1	1.18\|406457\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406457-406486	30	MN935200	UNVERIFIED: Staphylococcus phage VTCCBPA116 genomic sequence	20397-20426	8	0.733
NZ_LUEQ01000003_1	1.18\|406457\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406457-406486	30	MK417514	Staphylococcus virus Sa83, complete genome	31481-31510	8	0.733
NZ_LUEQ01000003_1	1.18\|406457\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406457-406486	30	MK584893	Staphylococcus phage vBSM-A1, complete genome	110007-110036	8	0.733
NZ_LUEQ01000003_1	1.18\|406457\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406457-406486	30	MN336263	Staphylococcus phage Sb1M_9832, complete genome	23946-23975	8	0.733
NZ_LUEQ01000003_1	1.18\|406457\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406457-406486	30	MH107769	Staphylococcus phage vB_SauM_0414_108, complete genome	32456-32485	8	0.733
NZ_LUEQ01000003_1	1.18\|406457\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406457-406486	30	MN336262	Staphylococcus phage Sb1M_6168, complete genome	23946-23975	8	0.733
NZ_LUEQ01000003_1	1.18\|406457\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406457-406486	30	AY954969	Bacteriophage G1, complete genome	127405-127434	8	0.733
NZ_LUEQ01000003_1	1.18\|406457\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406457-406486	30	MN539738	UNVERIFIED: Staphylococcus phage vB_SauM-D, complete genome	126628-126657	8	0.733
NZ_LUEQ01000003_1	1.18\|406457\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406457-406486	30	MG721208	Staphylococcus phage vB_SauM_LM12, complete genome	115332-115361	8	0.733
NZ_LUEQ01000003_1	1.18\|406457\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406457-406486	30	MK331931	Staphylococcus phage Sa30, complete genome	31837-31866	8	0.733
NZ_LUEQ01000003_1	1.18\|406457\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406457-406486	30	MT080600	UNVERIFIED: Staphylococcus phage vB_SauM_EW71, complete genome	85432-85461	8	0.733
NZ_LUEQ01000003_1	1.18\|406457\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406457-406486	30	KJ206563	Staphylococcus phage 812 isolate host-range mutant K1/420, complete genome	31187-31216	8	0.733
NZ_LUEQ01000003_1	1.18\|406457\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406457-406486	30	JX080302	Staphylococcus phage 676Z, complete genome	31874-31903	8	0.733
NZ_LUEQ01000003_1	1.18\|406457\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406457-406486	30	MN045228	Staphylococcus phage Maine, complete genome	33331-33360	8	0.733
NZ_LUEQ01000003_1	1.18\|406457\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406457-406486	30	MN047438	Staphylococcus phage vB_SauM-515A1	30934-30963	8	0.733
NZ_LUEQ01000003_1	1.18\|406457\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406457-406486	30	MF405094	Staphylococcus phage JA1, complete genome	31077-31106	8	0.733
NZ_LUEQ01000003_1	1.18\|406457\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406457-406486	30	MN336261	Staphylococcus phage Sb1_8383, complete genome	23946-23975	8	0.733
NZ_LUEQ01000003_1	1.18\|406457\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406457-406486	30	MN539737	UNVERIFIED: Staphylococcus phage vB_SauM-C, complete genome	131659-131688	8	0.733
NZ_LUEQ01000003_1	1.18\|406457\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406457-406486	30	EU418428	Staphylococcus phage A5W, complete genome	30952-30981	8	0.733
NZ_LUEQ01000003_1	1.18\|406457\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406457-406486	30	KP687431	Staphylococcus phage IME-SA1, complete genome	4307-4336	8	0.733
NZ_LUEQ01000003_1	1.18\|406457\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406457-406486	30	MK417516	Staphylococcus virus J-Sa36, complete genome	30981-31010	8	0.733
NZ_LUEQ01000003_1	1.18\|406457\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406457-406486	30	MT080602	UNVERIFIED: Staphylococcus phage vB_SauM_EW74, complete genome	124645-124674	8	0.733
NZ_LUEQ01000003_1	1.18\|406457\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406457-406486	30	NC_019726	Staphylococcus phage JD007, complete genome	56270-56299	8	0.733
NZ_LUEQ01000003_1	1.18\|406457\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406457-406486	30	KJ206561	Staphylococcus phage 812 isolate host-range mutant K1, complete genome	31119-31148	8	0.733
NZ_LUEQ01000003_1	1.18\|406457\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406457-406486	30	NC_047721	Staphylococcus phage SA5, complete genome	40202-40231	8	0.733
NZ_LUEQ01000003_1	1.18\|406457\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406457-406486	30	KP687432	Staphylococcus phage IME-SA2, complete genome	22653-22682	8	0.733
NZ_LUEQ01000003_1	1.18\|406457\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406457-406486	30	NC_047722	Staphylococcus phage Staph1N, complete genome	30952-30981	8	0.733
NZ_LUEQ01000003_1	1.18\|406457\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406457-406486	30	MK656892	Staphylococcus phage vBSP-A20, complete genome	105433-105462	8	0.733
NZ_LUEQ01000003_1	1.18\|406457\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406457-406486	30	NC_047723	Staphylococcus phage A3R, complete genome	30827-30856	8	0.733
NZ_LUEQ01000003_1	1.18\|406457\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406457-406486	30	KY794641	Staphylococcus phage vB_Sau_CG, complete genome	133556-133585	8	0.733
NZ_LUEQ01000003_1	1.18\|406457\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406457-406486	30	NC_047720	Staphylococcus phage ISP complete genome	127409-127438	8	0.733
NZ_LUEQ01000003_1	1.18\|406457\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406457-406486	30	JX080303	Staphylococcus phage Fi200W, complete genome	31830-31859	8	0.733
NZ_LUEQ01000003_1	1.18\|406457\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406457-406486	30	MG656408	Staphylococcus phage B1, complete genome	31504-31533	8	0.733
NZ_LUEQ01000003_1	1.18\|406457\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406457-406486	30	KF766114	Staphylococcus phage K, complete genome	30983-31012	8	0.733
NZ_LUEQ01000003_1	1.18\|406457\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406457-406486	30	NC_025416	Staphylococcus phage MCE-2014, complete genome	33122-33151	8	0.733
NZ_LUEQ01000003_1	1.18\|406457\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406457-406486	30	LR215719	Staphylococcus phage Stab21 genome assembly, chromosome: I	36308-36337	8	0.733
NZ_LUEQ01000003_1	1.18\|406457\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406457-406486	30	KR902361	Staphylococcus phage IME-SA118, complete genome	37402-37431	8	0.733
NZ_LUEQ01000003_1	1.18\|406457\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406457-406486	30	MH844529	Staphylococcus phage 812h1, complete genome	31857-31886	8	0.733
NZ_LUEQ01000003_1	1.18\|406457\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406457-406486	30	KC012913	Staphylococcus phage Team1, complete genome	31489-31518	8	0.733
NZ_LUEQ01000003_1	1.18\|406457\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406457-406486	30	MK331930	Staphylococcus phage CH1, complete genome	129786-129815	8	0.733
NZ_LUEQ01000003_1	1.18\|406457\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406457-406486	30	JX080305	Staphylococcus phage P4W, complete genome	30932-30961	8	0.733
NZ_LUEQ01000003_1	1.18\|406457\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406457-406486	30	KJ206560	Staphylococcus phage 812 isolate host-range mutant 812a, complete genome	31187-31216	8	0.733
NZ_LUEQ01000003_1	1.18\|406457\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406457-406486	30	MF398190	Staphylococcus phage vB_SauM-fRuSau02, complete genome	31503-31532	8	0.733
NZ_LUEQ01000003_1	1.18\|406457\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406457-406486	30	KR908644	Staphylococcus phage IME-SA119, complete genome	14294-14323	8	0.733
NZ_LUEQ01000003_1	1.18\|406457\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406457-406486	30	MT554104	Staphylococcus phage ESa1, complete genome	33360-33389	8	0.733
NZ_LUEQ01000003_1	1.18\|406457\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406457-406486	30	MK417515	Staphylococcus virus Sa87, complete genome	32322-32351	8	0.733
NZ_LUEQ01000003_1	1.18\|406457\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406457-406486	30	MH844528	Staphylococcus phage 812, complete genome	30981-31010	8	0.733
NZ_LUEQ01000003_1	1.18\|406457\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406457-406486	30	NC_007066	Staphylococcus phage G1, complete genome	127405-127434	8	0.733
NZ_LUEQ01000003_1	1.18\|406457\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406457-406486	30	NC_022920	Staphylococcus phage S25-3 DNA, complete genome	29770-29799	8	0.733
NZ_LUEQ01000003_1	1.18\|406457\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406457-406486	30	JX080304	Staphylococcus phage MSA6, complete genome	31473-31502	8	0.733
NZ_LUEQ01000003_1	1.18\|406457\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406457-406486	30	NC_023573	Staphylococcus phage phiSA012 DNA, complete genome	24862-24891	8	0.733
NZ_LUEQ01000003_1	1.18\|406457\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406457-406486	30	MH136584	Staphylococcus phage HYZ21, complete genome	21968-21997	8	0.733
NZ_LUEQ01000003_1	1.18\|406457\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406457-406486	30	NC_023009	Staphylococcus phage Sb-1, complete genome	23946-23975	8	0.733
NZ_LUEQ01000003_1	1.20\|406589\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406589-406618	30	NC_008381	Rhizobium leguminosarum bv. viciae 3841 plasmid pRL10, complete sequence	97710-97739	8	0.733
NZ_LUEQ01000003_1	1.20\|406589\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406589-406618	30	NZ_CP022669	Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR4, complete sequence	137489-137518	8	0.733
NZ_LUEQ01000003_1	1.22\|406721\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406721-406750	30	MK813939	Aeromonas phage 4_L372D, complete genome	91543-91572	8	0.733
NZ_LUEQ01000003_1	1.27\|407051\|30\|NZ_LUEQ01000003\|CRISPRCasFinder,CRT	407051-407080	30	JN638751	Bacillus phage G, complete genome	221970-221999	8	0.733
NZ_LUEQ01000003_1	1.7\|405730\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	405730-405759	30	MN692963	Marine virus AFVG_117M40, complete genome	38512-38541	9	0.7
NZ_LUEQ01000003_1	1.11\|405994\|31\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	405994-406024	31	MN693089	Marine virus AFVG_25M562, complete genome	22640-22670	9	0.71
NZ_LUEQ01000003_1	1.18\|406457\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406457-406486	30	NZ_CP035035	Pantoea ananatis strain NN08200 plasmid unnamed1, complete sequence	78913-78942	9	0.7
NZ_LUEQ01000003_1	1.26\|406985\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406985-407014	30	NC_011258	Borrelia recurrentis A1 plasmid pl37, complete sequence	5870-5899	9	0.7
NZ_LUEQ01000003_1	1.26\|406985\|30\|NZ_LUEQ01000003\|PILER-CR,CRISPRCasFinder,CRT	406985-407014	30	NC_011224	Borrelia duttonii Ly plasmid pl11, complete sequence	5734-5763	9	0.7

1. spacer 1.7|405730|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR134403 (Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence) position: , mismatch: 0, identity: 1.0

aaccttatctcgatatgaaacagaactgga	CRISPR spacer
aaccttatctcgatatgaaacagaactgga	Protospacer
******************************

2. spacer 1.7|405730|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to KJ094023 (Listeria phage LP-101, complete genome) position: , mismatch: 0, identity: 1.0

aaccttatctcgatatgaaacagaactgga	CRISPR spacer
aaccttatctcgatatgaaacagaactgga	Protospacer
******************************

3. spacer 1.11|405994|31|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to KJ094023 (Listeria phage LP-101, complete genome) position: , mismatch: 0, identity: 1.0

ttatagtttgtttaaatgaacttgttttcgc	CRISPR spacer
ttatagtttgtttaaatgaacttgttttcgc	Protospacer
*******************************

4. spacer 1.24|406853|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to NC_009813 (Listeria phage B054, complete genome) position: , mismatch: 0, identity: 1.0

gcgttgaaccagaaggtgggaaagaaacac	CRISPR spacer
gcgttgaaccagaaggtgggaaagaaacac	Protospacer
******************************

5. spacer 1.25|406919|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to MH341453 (Listeria phage PSU-VKH-LP041, complete genome) position: , mismatch: 0, identity: 1.0

tcttattctgacgctttggccaaacaattt	CRISPR spacer
tcttattctgacgctttggccaaacaattt	Protospacer
******************************

6. spacer 1.25|406919|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to NC_009813 (Listeria phage B054, complete genome) position: , mismatch: 0, identity: 1.0

tcttattctgacgctttggccaaacaattt	CRISPR spacer
tcttattctgacgctttggccaaacaattt	Protospacer
******************************

7. spacer 1.11|405994|31|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR134403 (Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence) position: , mismatch: 1, identity: 0.968

ttatagtttgtttaaatgaacttgttttcgc	CRISPR spacer
ttatagtttgtttaaatgaacttgtttttgc	Protospacer
****************************.**

8. spacer 1.17|406391|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to JB137888 (Sequence 7 from Patent WO2012159774) position: , mismatch: 1, identity: 0.967

taagttagtacaaccgcaactagatgctac	CRISPR spacer
taagttagtacaaccacaactagatgctac	Protospacer
***************.**************

9. spacer 1.17|406391|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to KJ094024 (Listeria phage LP-032 contig 1, partial genome) position: , mismatch: 1, identity: 0.967

taagttagtacaaccgcaactagatgctac	CRISPR spacer
taagttagtacaaccacaactagatgctac	Protospacer
***************.**************

10. spacer 1.17|406391|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to MN128593 (Listeria phage LP-031, complete genome) position: , mismatch: 1, identity: 0.967

taagttagtacaaccgcaactagatgctac	CRISPR spacer
taagttagtacaaccacaactagatgctac	Protospacer
***************.**************

11. spacer 1.17|406391|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to NC_021787 (Listeria phage LP-037, complete genome) position: , mismatch: 1, identity: 0.967

taagttagtacaaccgcaactagatgctac	CRISPR spacer
taagttagtacaaccacaactagatgctac	Protospacer
***************.**************

12. spacer 1.17|406391|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to JX442241 (Listeria phage P70, complete genome) position: , mismatch: 1, identity: 0.967

taagttagtacaaccgcaactagatgctac	CRISPR spacer
taagttagtacaaccacaactagatgctac	Protospacer
***************.**************

13. spacer 1.17|406391|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to KJ094020 (Listeria phage LP-026, complete genome) position: , mismatch: 1, identity: 0.967

taagttagtacaaccgcaactagatgctac	CRISPR spacer
taagttagtacaaccacaactagatgctac	Protospacer
***************.**************

14. spacer 1.24|406853|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to MH341453 (Listeria phage PSU-VKH-LP041, complete genome) position: , mismatch: 1, identity: 0.967

gcgttgaaccagaaggtgggaaagaaacac	CRISPR spacer
gcgttgaaccggaaggtgggaaagaaacac	Protospacer
**********.*******************

15. spacer 1.13|406127|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to KJ094028 (Listeria phage LP-083-1 contig 2, partial genome) position: , mismatch: 2, identity: 0.933

atgacgataaacctcatcactaacctttgt	CRISPR spacer
atgacgatagacctcatcactaacttttgt	Protospacer
*********.**************.*****

16. spacer 1.13|406127|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to DQ003641 (Listeria phage P35, complete genome) position: , mismatch: 2, identity: 0.933

atgacgataaacctcatcactaacctttgt	CRISPR spacer
atgacgatagacctcatcactaacttttgt	Protospacer
*********.**************.*****

17. spacer 1.17|406391|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to MH299806 (Listeria phage LP-KV022, complete genome) position: , mismatch: 2, identity: 0.933

taagttagtacaaccgcaactagatgctac	CRISPR spacer
taagttagtacaaccacaactcgatgctac	Protospacer
***************.***** ********

18. spacer 1.17|406391|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to MN114083 (Listeria phage LP-013, complete genome) position: , mismatch: 2, identity: 0.933

taagttagtacaaccgcaactagatgctac	CRISPR spacer
taagttagtacaaccacaactcgatgctac	Protospacer
***************.***** ********

19. spacer 1.17|406391|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to NC_021785 (Listeria phage LP-110, complete genome) position: , mismatch: 2, identity: 0.933

taagttagtacaaccgcaactagatgctac	CRISPR spacer
taagttagtacaaccacaactcgatgctac	Protospacer
***************.***** ********

20. spacer 1.17|406391|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to MN904502 (Listeria phage LP-018, complete genome) position: , mismatch: 2, identity: 0.933

taagttagtacaaccgcaactagatgctac	CRISPR spacer
taagttagtacaaccacaactcgatgctac	Protospacer
***************.***** ********

21. spacer 1.17|406391|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to KJ094021 (Listeria phage LP-114, complete genome) position: , mismatch: 2, identity: 0.933

taagttagtacaaccgcaactagatgctac	CRISPR spacer
taagttagtacaaccacaactcgatgctac	Protospacer
***************.***** ********

22. spacer 1.17|406391|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to MN114082 (Listeria phage LP-010, complete genome) position: , mismatch: 2, identity: 0.933

taagttagtacaaccgcaactagatgctac	CRISPR spacer
taagttagtacaaccacaactcgatgctac	Protospacer
***************.***** ********

23. spacer 1.19|406523|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to MH299806 (Listeria phage LP-KV022, complete genome) position: , mismatch: 2, identity: 0.933

atatagatgtgaaagaagtcccgtctactt	CRISPR spacer
atatagatgtgaaagaagtcccgtcaacgt	Protospacer
************************* ** *

24. spacer 1.19|406523|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to MN114083 (Listeria phage LP-013, complete genome) position: , mismatch: 2, identity: 0.933

atatagatgtgaaagaagtcccgtctactt	CRISPR spacer
atatagatgtgaaagaagtcccgtcaacgt	Protospacer
************************* ** *

25. spacer 1.19|406523|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to NC_021785 (Listeria phage LP-110, complete genome) position: , mismatch: 2, identity: 0.933

atatagatgtgaaagaagtcccgtctactt	CRISPR spacer
atatagatgtgaaagaagtcccgtcaacgt	Protospacer
************************* ** *

26. spacer 1.19|406523|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to MN904502 (Listeria phage LP-018, complete genome) position: , mismatch: 2, identity: 0.933

atatagatgtgaaagaagtcccgtctactt	CRISPR spacer
atatagatgtgaaagaagtcccgtcaacgt	Protospacer
************************* ** *

27. spacer 1.19|406523|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to MN114082 (Listeria phage LP-010, complete genome) position: , mismatch: 2, identity: 0.933

atatagatgtgaaagaagtcccgtctactt	CRISPR spacer
atatagatgtgaaagaagtcccgtcaacgt	Protospacer
************************* ** *

28. spacer 1.27|407051|30|NZ_LUEQ01000003|CRISPRCasFinder,CRT matches to DQ003637 (Listeria phage A500, complete genome) position: , mismatch: 2, identity: 0.933

tgtctgaatgtagttgatatctttaacttg	CRISPR spacer
tgtctgaatgtagttaatatcttcaacttg	Protospacer
***************.*******.******

29. spacer 1.27|407051|30|NZ_LUEQ01000003|CRISPRCasFinder,CRT matches to KJ094022 (Listeria phage LP-030-3, complete genome) position: , mismatch: 2, identity: 0.933

tgtctgaatgtagttgatatctttaacttg	CRISPR spacer
tgtctgaatgtagttaatatcttcaacttg	Protospacer
***************.*******.******

30. spacer 1.11|405994|31|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to MT500540 (Listeria phage LP-HM00113468, complete genome) position: , mismatch: 3, identity: 0.903

ttatagtttgtttaaatgaacttgttttcgc	CRISPR spacer
tgatagtctgtttaaaagaacttgttttcgc	Protospacer
* *****.******** **************

31. spacer 1.19|406523|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to JB137888 (Sequence 7 from Patent WO2012159774) position: , mismatch: 3, identity: 0.9

atatagatgtgaaagaagtcccgtctactt	CRISPR spacer
atatagatgtgaaagaagtgccgtccacat	Protospacer
******************* *****.** *

32. spacer 1.19|406523|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to KJ094026 (Listeria phage LP-032 contig 3, partial genome) position: , mismatch: 3, identity: 0.9

atatagatgtgaaagaagtcccgtctactt	CRISPR spacer
atatagacgtgaaagaagtcccgtcaacgt	Protospacer
*******.***************** ** *

33. spacer 1.19|406523|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to MN128593 (Listeria phage LP-031, complete genome) position: , mismatch: 3, identity: 0.9

atatagatgtgaaagaagtcccgtctactt	CRISPR spacer
atatagacgtgaaagaagtcccgtcaacgt	Protospacer
*******.***************** ** *

34. spacer 1.19|406523|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to NC_021787 (Listeria phage LP-037, complete genome) position: , mismatch: 3, identity: 0.9

atatagatgtgaaagaagtcccgtctactt	CRISPR spacer
aaatagatgtgaaagaagtcccgtcaacgt	Protospacer
* *********************** ** *

35. spacer 1.19|406523|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to JX442241 (Listeria phage P70, complete genome) position: , mismatch: 3, identity: 0.9

atatagatgtgaaagaagtcccgtctactt	CRISPR spacer
aaatagatgtgaaagaagtcccgtcaacgt	Protospacer
* *********************** ** *

36. spacer 1.19|406523|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to KJ094020 (Listeria phage LP-026, complete genome) position: , mismatch: 3, identity: 0.9

atatagatgtgaaagaagtcccgtctactt	CRISPR spacer
atatagacgtgaaagaagtcccgtcaacgt	Protospacer
*******.***************** ** *

37. spacer 1.19|406523|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to KJ094021 (Listeria phage LP-114, complete genome) position: , mismatch: 3, identity: 0.9

atatagatgtgaaagaagtcccgtctactt	CRISPR spacer
atatagatgtgaaagaagtgccgtcgacgt	Protospacer
******************* ***** ** *

38. spacer 1.17|406391|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026685 (Nostoc sp. 'Peltigera membranacea cyanobiont' N6 plasmid pNPM3, complete sequence) position: , mismatch: 5, identity: 0.833

taagttagtacaaccgcaactagatgctac	CRISPR spacer
aaagttagtacaaacacaactagatggaac	Protospacer
 ************ *.**********  **

39. spacer 1.26|406985|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to MK250019 (Prevotella phage Lak-A2, complete genome) position: , mismatch: 6, identity: 0.8

cggttgtttgattatcttgtgttgctttaa	CRISPR spacer
atgtatttttattatctggtgttgctttaa	Protospacer
  **  *** ******* ************

40. spacer 1.2|405400|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030856 (Runella sp. HYN0085 plasmid unnamed6, complete sequence) position: , mismatch: 7, identity: 0.767

ccttctatgagttcatgctctacgccactg	CRISPR spacer
cggtcaatgagttcctgctctacgccgcac	Protospacer
*  ** ******** ***********.*

41. spacer 1.9|405862|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to MT657337 (Microbacterium phage Mazun, complete genome) position: , mismatch: 7, identity: 0.767

agcttctctttcacataatacgtggtcata	CRISPR spacer
tgaatctctttcacatagtacgtggtgttc	Protospacer
 *  *************.********  *

42. spacer 1.10|405928|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to NC_041887 (Rhodococcus phage Weasels2, complete genome) position: , mismatch: 7, identity: 0.767

gaacactatctcgatattcataatatatga	CRISPR spacer
cataactatttcgatcttcataatatagaa	Protospacer
 *  *****.***** *********** .*

43. spacer 1.13|406127|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LN907828 (Erwinia gerundensis isolate E_g_EM595 plasmid pEM01, complete sequence) position: , mismatch: 7, identity: 0.767

atgacgataaacctcatcactaacctttgt	CRISPR spacer
accacgatactcctcatcactaacctgttc	Protospacer
*. ******  *************** * .

44. spacer 1.15|406259|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044104 (Streptococcus dysgalactiae strain FDAARGOS_654 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.767

tgatggtgagttaagaaaagtgaaaaaaga	CRISPR spacer
tcactcggagttaagaaaaataaaaaaaga	Protospacer
* *.   ************.*.********

45. spacer 1.15|406259|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KJ951051 (Streptococcus dysgalactiae subsp. equisimilis strain G279 plasmid pG279, complete sequence) position: , mismatch: 7, identity: 0.767

tgatggtgagttaagaaaagtgaaaaaaga	CRISPR spacer
tcactcggagttaagaaaaataaaaaaaga	Protospacer
* *.   ************.*.********

46. spacer 1.18|406457|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to MT786458 (Staphylococcus phage vB_SauH_SAP1, complete genome) position: , mismatch: 7, identity: 0.767

tgaaaaaaaggaaagtaagccagttactta	CRISPR spacer
tgaaaaaaaggaaagtaaacctctaaatct	Protospacer
******************.**  * * *.

47. spacer 1.18|406457|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to MG557618 (Staphylococcus phage HSA30, complete genome) position: , mismatch: 7, identity: 0.767

tgaaaaaaaggaaagtaagccagttactta	CRISPR spacer
tgaaaaaaaggaaagtaaacctctaaatct	Protospacer
******************.**  * * *.

48. spacer 1.18|406457|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to LR215718 (Staphylococcus phage Stab20 genome assembly, chromosome: I) position: , mismatch: 7, identity: 0.767

tgaaaaaaaggaaagtaagccagttactta	CRISPR spacer
tgaaaaaaaggaaagtaaacctctaaatct	Protospacer
******************.**  * * *.

49. spacer 1.18|406457|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to MT080601 (UNVERIFIED: Staphylococcus phage vB_SauM_EW72, complete genome) position: , mismatch: 7, identity: 0.767

tgaaaaaaaggaaagtaagccagttactta	CRISPR spacer
tgaaaaaaaggaaagtaaacctctaaatct	Protospacer
******************.**  * * *.

50. spacer 1.18|406457|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to MT080585 (UNVERIFIED: Staphylococcus phage vB_SauM_EW18, complete genome) position: , mismatch: 7, identity: 0.767

tgaaaaaaaggaaagtaagccagttactta	CRISPR spacer
tgaaaaaaaggaaagtaaacctctaaatct	Protospacer
******************.**  * * *.

51. spacer 1.18|406457|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to MT787017 (UNVERIFIED: Staphylococcus phage WV, complete genome) position: , mismatch: 7, identity: 0.767

tgaaaaaaaggaaagtaagccagttactta	CRISPR spacer
tgaaaaaaaggaaagtaaacctctaaatct	Protospacer
******************.**  * * *.

52. spacer 1.18|406457|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to KY779849 (Staphylococcus phage qdsa002, complete genome) position: , mismatch: 7, identity: 0.767

tgaaaaaaaggaaagtaagccagttactta	CRISPR spacer
tgaaaaaaaggaaagtaaacctctaaatct	Protospacer
******************.**  * * *.

53. spacer 1.18|406457|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to MF001365 (Staphylococcus phage SA3, partial genome) position: , mismatch: 7, identity: 0.767

tgaaaaaaaggaaagtaagccagttactta	CRISPR spacer
tgaaaaaaaggaaagtaaacctctaaatct	Protospacer
******************.**  * * *.

54. spacer 1.18|406457|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to MH159197 (Staphylococcus phage VB_SavM_JYL01, complete genome) position: , mismatch: 7, identity: 0.767

tgaaaaaaaggaaagtaagccagttactta	CRISPR spacer
tgaaaaaaaggaaagtaaacctctaaatct	Protospacer
******************.**  * * *.

55. spacer 1.18|406457|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to MN304941 (Staphylococcus phage vB_SauH_IME522, complete genome) position: , mismatch: 7, identity: 0.767

tgaaaaaaaggaaagtaagccagttactta	CRISPR spacer
tgaaaaaaaggaaagtaaacctctaaatct	Protospacer
******************.**  * * *.

56. spacer 1.18|406457|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to MK250904 (Staphylococcus phage VB-SavM-JYL02, complete genome) position: , mismatch: 7, identity: 0.767

tgaaaaaaaggaaagtaagccagttactta	CRISPR spacer
tgaaaaaaaggaaagtaaacctctaaatct	Protospacer
******************.**  * * *.

57. spacer 1.18|406457|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to KY794643 (Staphylococcus phage vB_Sau_S24, complete genome) position: , mismatch: 7, identity: 0.767

tgaaaaaaaggaaagtaagccagttactta	CRISPR spacer
tgaaaaaaaggaaagtaaacctctaaatct	Protospacer
******************.**  * * *.

58. spacer 1.18|406457|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to MT080591 (UNVERIFIED: Staphylococcus phage vB_SauM_EW29, complete genome) position: , mismatch: 7, identity: 0.767

tgaaaaaaaggaaagtaagccagttactta	CRISPR spacer
tgaaaaaaaggaaagtaaacctctaaatct	Protospacer
******************.**  * * *.

59. spacer 1.18|406457|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to LR215721 (Staphylococcus phage Stab22 genome assembly, chromosome: I) position: , mismatch: 7, identity: 0.767

tgaaaaaaaggaaagtaagccagttactta	CRISPR spacer
tgaaaaaaaggaaagtaaacctctaaatct	Protospacer
******************.**  * * *.

60. spacer 1.18|406457|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to LR215720 (Staphylococcus phage Stab23 genome assembly, chromosome: I) position: , mismatch: 7, identity: 0.767

tgaaaaaaaggaaagtaagccagttactta	CRISPR spacer
tgaaaaaaaggaaagtaaacctctaaatct	Protospacer
******************.**  * * *.

61. spacer 1.18|406457|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to KM216423 (Staphylococcus phage P108, complete genome) position: , mismatch: 7, identity: 0.767

tgaaaaaaaggaaagtaagccagttactta	CRISPR spacer
tgaaaaaaaggaaagtaaacctctaaatct	Protospacer
******************.**  * * *.

62. spacer 1.18|406457|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to NC_028765 (Staphylococcus phage phiIPLA-RODI, complete genome) position: , mismatch: 7, identity: 0.767

tgaaaaaaaggaaagtaagccagttactta	CRISPR spacer
tgaaaaaaaggaaagtaaacctctaaatct	Protospacer
******************.**  * * *.

63. spacer 1.18|406457|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to MT080589 (UNVERIFIED: Staphylococcus phage vB_SauM_EW26, complete genome) position: , mismatch: 7, identity: 0.767

tgaaaaaaaggaaagtaagccagttactta	CRISPR spacer
tgaaaaaaaggaaagtaaacctctaaatct	Protospacer
******************.**  * * *.

64. spacer 1.18|406457|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to KY794642 (Staphylococcus phage vB_Sau_Clo6, complete genome) position: , mismatch: 7, identity: 0.767

tgaaaaaaaggaaagtaagccagttactta	CRISPR spacer
tgaaaaaaaggaaagtaaacctctaaatct	Protospacer
******************.**  * * *.

65. spacer 1.18|406457|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to NC_019448 (Staphylococcus phage GH15, complete genome) position: , mismatch: 7, identity: 0.767

tgaaaaaaaggaaagtaagccagttactta	CRISPR spacer
tgaaaaaaaggaaagtaaacctctaaatct	Protospacer
******************.**  * * *.

66. spacer 1.20|406589|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to DQ123818 (Actinomyces phage Av-1, complete genome) position: , mismatch: 7, identity: 0.767

cgttggcaagaagccttttttcactggtgt	CRISPR spacer
tgctggcaagaaggctttcttcactgctca	Protospacer
.*.********** ****.******* *

67. spacer 1.24|406853|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to NC_048855 (Phage NBEco002, complete genome) position: , mismatch: 7, identity: 0.767

gcgttgaaccagaaggtgggaaagaaacac	CRISPR spacer
tcgttgaaccagaagctggaaaagctactt	Protospacer
 ************** ***.****  ** .

68. spacer 1.24|406853|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to NC_017969 (Escherichia phage bV_EcoS_AKFV33, complete genome) position: , mismatch: 7, identity: 0.767

gcgttgaaccagaaggtgggaaagaaacac	CRISPR spacer
tcgttgaaccagaagctggaaaagctactt	Protospacer
 ************** ***.****  ** .

69. spacer 1.24|406853|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to NC_024139 (Escherichia phage vB_EcoS_FFH1, complete genome) position: , mismatch: 7, identity: 0.767

gcgttgaaccagaaggtgggaaagaaacac	CRISPR spacer
tcgttgaaccagaagctggaaaagctactt	Protospacer
 ************** ***.****  ** .

70. spacer 1.24|406853|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to MN022787 (Salmonella virus VSe12, complete genome) position: , mismatch: 7, identity: 0.767

gcgttgaaccagaaggtgggaaagaaacac	CRISPR spacer
tcgttgaaccagaagctggaaaagctactt	Protospacer
 ************** ***.****  ** .

71. spacer 1.27|407051|30|NZ_LUEQ01000003|CRISPRCasFinder,CRT matches to KT878766 (Staphylococcus phage P1105, complete genome) position: , mismatch: 7, identity: 0.767

tgtctgaatgtagttgatatctttaacttg	CRISPR spacer
aattggtatgttgttcatatctttaacttg	Protospacer
 .*. * **** *** **************

72. spacer 1.27|407051|30|NZ_LUEQ01000003|CRISPRCasFinder,CRT matches to NC_025460 (Staphylococcus phage phiSa119, complete genome) position: , mismatch: 7, identity: 0.767

tgtctgaatgtagttgatatctttaacttg	CRISPR spacer
aattggtatgttgttcatatctttaacttg	Protospacer
 .*. * **** *** **************

73. spacer 1.6|405664|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050268 (Salinivibrio costicola strain M318 plasmid pM138.1, complete sequence) position: , mismatch: 8, identity: 0.733

atgaacaggcacaagcgttagggataaatc	CRISPR spacer
gtttgatggcacaagcgttagggattaatt	Protospacer
.*  .  ****************** ***.

74. spacer 1.11|405994|31|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to MG945160 (UNVERIFIED: Microviridae sp. isolate 396-1801, complete genome) position: , mismatch: 8, identity: 0.742

ttatagtttgtttaaatgaacttgttttcgc	CRISPR spacer
caatgatttgtttgaatgaagttgttttcat	Protospacer
. **..*******.****** ********..

75. spacer 1.13|406127|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to MH572283 (Microviridae sp. isolate SD_SC_54, complete genome) position: , mismatch: 8, identity: 0.733

atgacgataaacctcatcactaacctttgt	CRISPR spacer
agcacgattaacctcatcactaaactgacg	Protospacer
*  ***** ************** **

76. spacer 1.15|406259|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP017978 (Neochlamydia sp. S13 plasmid pS13, complete sequence) position: , mismatch: 8, identity: 0.733

tgatggtgagttaagaaaagtgaaaaaaga	CRISPR spacer
tttcctggatttaagaaaattgaaaaaaga	Protospacer
*  .   ** ********* **********

77. spacer 1.17|406391|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to MN694584 (Marine virus AFVG_250M353, complete genome) position: , mismatch: 8, identity: 0.733

taagttagtacaaccgcaactagatgctac	CRISPR spacer
ttcagcagtacaaactcaactagatgctaa	Protospacer
*  . .******* * *************

78. spacer 1.18|406457|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013354 (Clostridium butyricum strain JKY6D1 plasmid, complete sequence) position: , mismatch: 8, identity: 0.733

tgaaaaaaaggaaagtaagccagttactta	CRISPR spacer
tagaaaagagtaaagtaagccagttagcac	Protospacer
*..****.** *************** .

79. spacer 1.18|406457|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to NC_012760 (Clostridium butyricum plasmid pCBM588 DNA, complete sequence, strain: MIYAIRI 588) position: , mismatch: 8, identity: 0.733

tgaaaaaaaggaaagtaagccagttactta	CRISPR spacer
tagaaaagagtaaagtaagccagttagcac	Protospacer
*..****.** *************** .

80. spacer 1.18|406457|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to CP016334 (Clostridium butyricum strain TK520 plasmid, complete sequence) position: , mismatch: 8, identity: 0.733

tgaaaaaaaggaaagtaagccagttactta	CRISPR spacer
tagaaaagagtaaagtaagccagttagcac	Protospacer
*..****.** *************** .

81. spacer 1.18|406457|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013240 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_1, complete sequence) position: , mismatch: 8, identity: 0.733

tgaaaaaaaggaaagtaagccagttactta	CRISPR spacer
tagaaaagagtaaagtaagccagttagcac	Protospacer
*..****.** *************** .

82. spacer 1.18|406457|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019718 (Clostridium butyricum strain NBRC 13949 plasmid pCBU2, complete sequence) position: , mismatch: 8, identity: 0.733

tgaaaaaaaggaaagtaagccagttactta	CRISPR spacer
tagaaaagagtaaagtaagccagttagcac	Protospacer
*..****.** *************** .

83. spacer 1.18|406457|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014706 (Clostridium butyricum strain TOA plasmid, complete sequence) position: , mismatch: 8, identity: 0.733

tgaaaaaaaggaaagtaagccagttactta	CRISPR spacer
tagaaaagagtaaagtaagccagttagcac	Protospacer
*..****.** *************** .

84. spacer 1.18|406457|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to MN539736 (UNVERIFIED: Staphylococcus phage vB_SauM-A, complete genome) position: , mismatch: 8, identity: 0.733

tgaaaaaaaggaaagtaagccagttactta	CRISPR spacer
tgaaaaaaaggaaagtaaacctctaaacct	Protospacer
******************.**  * * ..

85. spacer 1.18|406457|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to KY581279 (Staphylococcus phage pSa-3, complete genome) position: , mismatch: 8, identity: 0.733

tgaaaaaaaggaaagtaagccagttactta	CRISPR spacer
tgaaaaaaaggaaagtaaacctctaaacct	Protospacer
******************.**  * * ..

86. spacer 1.18|406457|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to MT411892 (Staphylococcus phage Metroid, complete genome) position: , mismatch: 8, identity: 0.733

tgaaaaaaaggaaagtaagccagttactta	CRISPR spacer
tgaaaaaaaggaaagtaaacctctaaacct	Protospacer
******************.**  * * ..

87. spacer 1.18|406457|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to KJ206562 (Staphylococcus phage 812 isolate host-range mutant 812F1, complete genome) position: , mismatch: 8, identity: 0.733

tgaaaaaaaggaaagtaagccagttactta	CRISPR spacer
tgaaaaaaaggaaagtaaacctctaaacct	Protospacer
******************.**  * * ..

88. spacer 1.18|406457|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to AP018375 (Staphylococcus phage phiSA039 DNA, complete genome) position: , mismatch: 8, identity: 0.733

tgaaaaaaaggaaagtaagccagttactta	CRISPR spacer
tgaaaaaaaggaaagtaaacctctaaacct	Protospacer
******************.**  * * ..

89. spacer 1.18|406457|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to MN935200 (UNVERIFIED: Staphylococcus phage VTCCBPA116 genomic sequence) position: , mismatch: 8, identity: 0.733

tgaaaaaaaggaaagtaagccagttactta	CRISPR spacer
tgaaaaaaaggaaagtaaacctctaaacct	Protospacer
******************.**  * * ..

90. spacer 1.18|406457|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to MK417514 (Staphylococcus virus Sa83, complete genome) position: , mismatch: 8, identity: 0.733

tgaaaaaaaggaaagtaagccagttactta	CRISPR spacer
tgaaaaaaaggaaagtaaacctctaaacct	Protospacer
******************.**  * * ..

91. spacer 1.18|406457|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to MK584893 (Staphylococcus phage vBSM-A1, complete genome) position: , mismatch: 8, identity: 0.733

tgaaaaaaaggaaagtaagccagttactta	CRISPR spacer
tgaaaaaaaggaaagtaaacctctaaacct	Protospacer
******************.**  * * ..

92. spacer 1.18|406457|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to MN336263 (Staphylococcus phage Sb1M_9832, complete genome) position: , mismatch: 8, identity: 0.733

tgaaaaaaaggaaagtaagccagttactta	CRISPR spacer
tgaaaaaaaggaaagtaaacctctaaacct	Protospacer
******************.**  * * ..

93. spacer 1.18|406457|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to MH107769 (Staphylococcus phage vB_SauM_0414_108, complete genome) position: , mismatch: 8, identity: 0.733

tgaaaaaaaggaaagtaagccagttactta	CRISPR spacer
tgaaaaaaaggaaagtaaacctctaaacct	Protospacer
******************.**  * * ..

94. spacer 1.18|406457|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to MN336262 (Staphylococcus phage Sb1M_6168, complete genome) position: , mismatch: 8, identity: 0.733

tgaaaaaaaggaaagtaagccagttactta	CRISPR spacer
tgaaaaaaaggaaagtaaacctctaaacct	Protospacer
******************.**  * * ..

95. spacer 1.18|406457|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to AY954969 (Bacteriophage G1, complete genome) position: , mismatch: 8, identity: 0.733

tgaaaaaaaggaaagtaagccagttactta	CRISPR spacer
tgaaaaaaaggaaagtaaacctctaaacct	Protospacer
******************.**  * * ..

96. spacer 1.18|406457|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to MN539738 (UNVERIFIED: Staphylococcus phage vB_SauM-D, complete genome) position: , mismatch: 8, identity: 0.733

tgaaaaaaaggaaagtaagccagttactta	CRISPR spacer
tgaaaaaaaggaaagtaaacctctaaacct	Protospacer
******************.**  * * ..

97. spacer 1.18|406457|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to MG721208 (Staphylococcus phage vB_SauM_LM12, complete genome) position: , mismatch: 8, identity: 0.733

tgaaaaaaaggaaagtaagccagttactta	CRISPR spacer
tgaaaaaaaggaaagtaaacctctaaacct	Protospacer
******************.**  * * ..

98. spacer 1.18|406457|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to MK331931 (Staphylococcus phage Sa30, complete genome) position: , mismatch: 8, identity: 0.733

tgaaaaaaaggaaagtaagccagttactta	CRISPR spacer
tgaaaaaaaggaaagtaaacctctaaacct	Protospacer
******************.**  * * ..

99. spacer 1.18|406457|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to MT080600 (UNVERIFIED: Staphylococcus phage vB_SauM_EW71, complete genome) position: , mismatch: 8, identity: 0.733

tgaaaaaaaggaaagtaagccagttactta	CRISPR spacer
tgaaaaaaaggaaagtaaacctctaaacct	Protospacer
******************.**  * * ..

100. spacer 1.18|406457|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to KJ206563 (Staphylococcus phage 812 isolate host-range mutant K1/420, complete genome) position: , mismatch: 8, identity: 0.733

tgaaaaaaaggaaagtaagccagttactta	CRISPR spacer
tgaaaaaaaggaaagtaaacctctaaacct	Protospacer
******************.**  * * ..

101. spacer 1.18|406457|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to JX080302 (Staphylococcus phage 676Z, complete genome) position: , mismatch: 8, identity: 0.733

tgaaaaaaaggaaagtaagccagttactta	CRISPR spacer
tgaaaaaaaggaaagtaaacctctaaacct	Protospacer
******************.**  * * ..

102. spacer 1.18|406457|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to MN045228 (Staphylococcus phage Maine, complete genome) position: , mismatch: 8, identity: 0.733

tgaaaaaaaggaaagtaagccagttactta	CRISPR spacer
tgaaaaaaaggaaagtaaacctctaaacct	Protospacer
******************.**  * * ..

103. spacer 1.18|406457|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to MN047438 (Staphylococcus phage vB_SauM-515A1) position: , mismatch: 8, identity: 0.733

tgaaaaaaaggaaagtaagccagttactta	CRISPR spacer
tgaaaaaaaggaaagtaaacctctaaacct	Protospacer
******************.**  * * ..

104. spacer 1.18|406457|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to MF405094 (Staphylococcus phage JA1, complete genome) position: , mismatch: 8, identity: 0.733

tgaaaaaaaggaaagtaagccagttactta	CRISPR spacer
tgaaaaaaaggaaagtaaacctctaaacct	Protospacer
******************.**  * * ..

105. spacer 1.18|406457|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to MN336261 (Staphylococcus phage Sb1_8383, complete genome) position: , mismatch: 8, identity: 0.733

tgaaaaaaaggaaagtaagccagttactta	CRISPR spacer
tgaaaaaaaggaaagtaaacctctaaacct	Protospacer
******************.**  * * ..

106. spacer 1.18|406457|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to MN539737 (UNVERIFIED: Staphylococcus phage vB_SauM-C, complete genome) position: , mismatch: 8, identity: 0.733

tgaaaaaaaggaaagtaagccagttactta	CRISPR spacer
tgaaaaaaaggaaagtaaacctctaaacct	Protospacer
******************.**  * * ..

107. spacer 1.18|406457|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to EU418428 (Staphylococcus phage A5W, complete genome) position: , mismatch: 8, identity: 0.733

tgaaaaaaaggaaagtaagccagttactta	CRISPR spacer
tgaaaaaaaggaaagtaaacctctaaacct	Protospacer
******************.**  * * ..

108. spacer 1.18|406457|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to KP687431 (Staphylococcus phage IME-SA1, complete genome) position: , mismatch: 8, identity: 0.733

tgaaaaaaaggaaagtaagccagttactta	CRISPR spacer
tgaaaaaaaggaaagtaaacctctaaacct	Protospacer
******************.**  * * ..

109. spacer 1.18|406457|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to MK417516 (Staphylococcus virus J-Sa36, complete genome) position: , mismatch: 8, identity: 0.733

tgaaaaaaaggaaagtaagccagttactta	CRISPR spacer
tgaaaaaaaggaaagtaaacctctaaacct	Protospacer
******************.**  * * ..

110. spacer 1.18|406457|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to MT080602 (UNVERIFIED: Staphylococcus phage vB_SauM_EW74, complete genome) position: , mismatch: 8, identity: 0.733

tgaaaaaaaggaaagtaagccagttactta	CRISPR spacer
tgaaaaaaaggaaagtaaacctctaaacct	Protospacer
******************.**  * * ..

111. spacer 1.18|406457|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to NC_019726 (Staphylococcus phage JD007, complete genome) position: , mismatch: 8, identity: 0.733

tgaaaaaaaggaaagtaagccagttactta	CRISPR spacer
tgaaaaaaaggaaagtaaacctctaaacct	Protospacer
******************.**  * * ..

112. spacer 1.18|406457|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to KJ206561 (Staphylococcus phage 812 isolate host-range mutant K1, complete genome) position: , mismatch: 8, identity: 0.733

tgaaaaaaaggaaagtaagccagttactta	CRISPR spacer
tgaaaaaaaggaaagtaaacctctaaacct	Protospacer
******************.**  * * ..

113. spacer 1.18|406457|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to NC_047721 (Staphylococcus phage SA5, complete genome) position: , mismatch: 8, identity: 0.733

tgaaaaaaaggaaagtaagccagttactta	CRISPR spacer
tgaaaaaaaggaaagtaaacctctaaacct	Protospacer
******************.**  * * ..

114. spacer 1.18|406457|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to KP687432 (Staphylococcus phage IME-SA2, complete genome) position: , mismatch: 8, identity: 0.733

tgaaaaaaaggaaagtaagccagttactta	CRISPR spacer
tgaaaaaaaggaaagtaaacctctaaacct	Protospacer
******************.**  * * ..

115. spacer 1.18|406457|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to NC_047722 (Staphylococcus phage Staph1N, complete genome) position: , mismatch: 8, identity: 0.733

tgaaaaaaaggaaagtaagccagttactta	CRISPR spacer
tgaaaaaaaggaaagtaaacctctaaacct	Protospacer
******************.**  * * ..

116. spacer 1.18|406457|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to MK656892 (Staphylococcus phage vBSP-A20, complete genome) position: , mismatch: 8, identity: 0.733

tgaaaaaaaggaaagtaagccagttactta	CRISPR spacer
tgaaaaaaaggaaagtaaacctctaaacct	Protospacer
******************.**  * * ..

117. spacer 1.18|406457|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to NC_047723 (Staphylococcus phage A3R, complete genome) position: , mismatch: 8, identity: 0.733

tgaaaaaaaggaaagtaagccagttactta	CRISPR spacer
tgaaaaaaaggaaagtaaacctctaaacct	Protospacer
******************.**  * * ..

118. spacer 1.18|406457|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to KY794641 (Staphylococcus phage vB_Sau_CG, complete genome) position: , mismatch: 8, identity: 0.733

tgaaaaaaaggaaagtaagccagttactta	CRISPR spacer
tgaaaaaaaggaaagtaaacctctaaacct	Protospacer
******************.**  * * ..

119. spacer 1.18|406457|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to NC_047720 (Staphylococcus phage ISP complete genome) position: , mismatch: 8, identity: 0.733

tgaaaaaaaggaaagtaagccagttactta	CRISPR spacer
tgaaaaaaaggaaagtaaacctctaaacct	Protospacer
******************.**  * * ..

120. spacer 1.18|406457|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to JX080303 (Staphylococcus phage Fi200W, complete genome) position: , mismatch: 8, identity: 0.733

tgaaaaaaaggaaagtaagccagttactta	CRISPR spacer
tgaaaaaaaggaaagtaaacctctaaacct	Protospacer
******************.**  * * ..

121. spacer 1.18|406457|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to MG656408 (Staphylococcus phage B1, complete genome) position: , mismatch: 8, identity: 0.733

tgaaaaaaaggaaagtaagccagttactta	CRISPR spacer
tgaaaaaaaggaaagtaaacctctaaacct	Protospacer
******************.**  * * ..

122. spacer 1.18|406457|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to KF766114 (Staphylococcus phage K, complete genome) position: , mismatch: 8, identity: 0.733

tgaaaaaaaggaaagtaagccagttactta	CRISPR spacer
tgaaaaaaaggaaagtaaacctctaaacct	Protospacer
******************.**  * * ..

123. spacer 1.18|406457|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to NC_025416 (Staphylococcus phage MCE-2014, complete genome) position: , mismatch: 8, identity: 0.733

tgaaaaaaaggaaagtaagccagttactta	CRISPR spacer
tgaaaaaaaggaaagtaaacctctaaacct	Protospacer
******************.**  * * ..

124. spacer 1.18|406457|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to LR215719 (Staphylococcus phage Stab21 genome assembly, chromosome: I) position: , mismatch: 8, identity: 0.733

tgaaaaaaaggaaagtaagccagttactta	CRISPR spacer
tgaaaaaaaggaaagtaaacctctaaacct	Protospacer
******************.**  * * ..

125. spacer 1.18|406457|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to KR902361 (Staphylococcus phage IME-SA118, complete genome) position: , mismatch: 8, identity: 0.733

tgaaaaaaaggaaagtaagccagttactta	CRISPR spacer
tgaaaaaaaggaaagtaaacctctaaacct	Protospacer
******************.**  * * ..

126. spacer 1.18|406457|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to MH844529 (Staphylococcus phage 812h1, complete genome) position: , mismatch: 8, identity: 0.733

tgaaaaaaaggaaagtaagccagttactta	CRISPR spacer
tgaaaaaaaggaaagtaaacctctaaacct	Protospacer
******************.**  * * ..

127. spacer 1.18|406457|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to KC012913 (Staphylococcus phage Team1, complete genome) position: , mismatch: 8, identity: 0.733

tgaaaaaaaggaaagtaagccagttactta	CRISPR spacer
tgaaaaaaaggaaagtaaacctctaaacct	Protospacer
******************.**  * * ..

128. spacer 1.18|406457|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to MK331930 (Staphylococcus phage CH1, complete genome) position: , mismatch: 8, identity: 0.733

tgaaaaaaaggaaagtaagccagttactta	CRISPR spacer
tgaaaaaaaggaaagtaaacctctaaacct	Protospacer
******************.**  * * ..

129. spacer 1.18|406457|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to JX080305 (Staphylococcus phage P4W, complete genome) position: , mismatch: 8, identity: 0.733

tgaaaaaaaggaaagtaagccagttactta	CRISPR spacer
tgaaaaaaaggaaagtaaacctctaaacct	Protospacer
******************.**  * * ..

130. spacer 1.18|406457|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to KJ206560 (Staphylococcus phage 812 isolate host-range mutant 812a, complete genome) position: , mismatch: 8, identity: 0.733

tgaaaaaaaggaaagtaagccagttactta	CRISPR spacer
tgaaaaaaaggaaagtaaacctctaaacct	Protospacer
******************.**  * * ..

131. spacer 1.18|406457|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to MF398190 (Staphylococcus phage vB_SauM-fRuSau02, complete genome) position: , mismatch: 8, identity: 0.733

tgaaaaaaaggaaagtaagccagttactta	CRISPR spacer
tgaaaaaaaggaaagtaaacctctaaacct	Protospacer
******************.**  * * ..

132. spacer 1.18|406457|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to KR908644 (Staphylococcus phage IME-SA119, complete genome) position: , mismatch: 8, identity: 0.733

tgaaaaaaaggaaagtaagccagttactta	CRISPR spacer
tgaaaaaaaggaaagtaaacctctaaacct	Protospacer
******************.**  * * ..

133. spacer 1.18|406457|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to MT554104 (Staphylococcus phage ESa1, complete genome) position: , mismatch: 8, identity: 0.733

tgaaaaaaaggaaagtaagccagttactta	CRISPR spacer
tgaaaaaaaggaaagtaaacctctaaacct	Protospacer
******************.**  * * ..

134. spacer 1.18|406457|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to MK417515 (Staphylococcus virus Sa87, complete genome) position: , mismatch: 8, identity: 0.733

tgaaaaaaaggaaagtaagccagttactta	CRISPR spacer
tgaaaaaaaggaaagtaaacctctaaacct	Protospacer
******************.**  * * ..

135. spacer 1.18|406457|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to MH844528 (Staphylococcus phage 812, complete genome) position: , mismatch: 8, identity: 0.733

tgaaaaaaaggaaagtaagccagttactta	CRISPR spacer
tgaaaaaaaggaaagtaaacctctaaacct	Protospacer
******************.**  * * ..

136. spacer 1.18|406457|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to NC_007066 (Staphylococcus phage G1, complete genome) position: , mismatch: 8, identity: 0.733

tgaaaaaaaggaaagtaagccagttactta	CRISPR spacer
tgaaaaaaaggaaagtaaacctctaaacct	Protospacer
******************.**  * * ..

137. spacer 1.18|406457|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to NC_022920 (Staphylococcus phage S25-3 DNA, complete genome) position: , mismatch: 8, identity: 0.733

tgaaaaaaaggaaagtaagccagttactta	CRISPR spacer
tgaaaaaaaggaaagtaaacctctaaacct	Protospacer
******************.**  * * ..

138. spacer 1.18|406457|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to JX080304 (Staphylococcus phage MSA6, complete genome) position: , mismatch: 8, identity: 0.733

tgaaaaaaaggaaagtaagccagttactta	CRISPR spacer
tgaaaaaaaggaaagtaaacctctaaacct	Protospacer
******************.**  * * ..

139. spacer 1.18|406457|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to NC_023573 (Staphylococcus phage phiSA012 DNA, complete genome) position: , mismatch: 8, identity: 0.733

tgaaaaaaaggaaagtaagccagttactta	CRISPR spacer
tgaaaaaaaggaaagtaaacctctaaacct	Protospacer
******************.**  * * ..

140. spacer 1.18|406457|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to MH136584 (Staphylococcus phage HYZ21, complete genome) position: , mismatch: 8, identity: 0.733

tgaaaaaaaggaaagtaagccagttactta	CRISPR spacer
tgaaaaaaaggaaagtaaacctctaaacct	Protospacer
******************.**  * * ..

141. spacer 1.18|406457|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to NC_023009 (Staphylococcus phage Sb-1, complete genome) position: , mismatch: 8, identity: 0.733

tgaaaaaaaggaaagtaagccagttactta	CRISPR spacer
tgaaaaaaaggaaagtaaacctctaaacct	Protospacer
******************.**  * * ..

142. spacer 1.20|406589|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to NC_008381 (Rhizobium leguminosarum bv. viciae 3841 plasmid pRL10, complete sequence) position: , mismatch: 8, identity: 0.733

cgttggcaagaagccttttttcactggtgt	CRISPR spacer
ttcgggcacgaagccttttttcacaggatt	Protospacer
. . **** *************** **  *

143. spacer 1.20|406589|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022669 (Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR4, complete sequence) position: , mismatch: 8, identity: 0.733

cgttggcaagaagccttttttcactggtgt	CRISPR spacer
ttcgggcacgaagccttttttcacaggatt	Protospacer
. . **** *************** **  *

144. spacer 1.22|406721|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to MK813939 (Aeromonas phage 4_L372D, complete genome) position: , mismatch: 8, identity: 0.733

agttatcaacaagaaaagaccttctgtgca	CRISPR spacer
ttttatcaacaataaaagaccttcctacct	Protospacer
  ********** ***********.   *

145. spacer 1.27|407051|30|NZ_LUEQ01000003|CRISPRCasFinder,CRT matches to JN638751 (Bacillus phage G, complete genome) position: , mismatch: 8, identity: 0.733

tgtctgaatgtagttgatatctttaacttg	CRISPR spacer
taaatccttgtagttgatacctttaacttt	Protospacer
*.  *   ***********.*********

146. spacer 1.7|405730|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to MN692963 (Marine virus AFVG_117M40, complete genome) position: , mismatch: 9, identity: 0.7

aaccttatctcgatatgaaacagaactgga	CRISPR spacer
gcacttatctcgttatggaacagaacccag	Protospacer
.  ********* ****.********. ..

147. spacer 1.11|405994|31|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to MN693089 (Marine virus AFVG_25M562, complete genome) position: , mismatch: 9, identity: 0.71

ttatagtttgtttaaatgaacttgttttcgc	CRISPR spacer
atgaagtttctttaaatgaacttgttccaaa	Protospacer
 *. ***** ****************.. .

148. spacer 1.18|406457|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP035035 (Pantoea ananatis strain NN08200 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

tgaaaaaaaggaaagtaagccagttactta	CRISPR spacer
tgaaaaaaaggaaagtcagccggacggggc	Protospacer
**************** ****.* ..

149. spacer 1.26|406985|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to NC_011258 (Borrelia recurrentis A1 plasmid pl37, complete sequence) position: , mismatch: 9, identity: 0.7

cggttgtttgattatcttgtgttgctttaa	CRISPR spacer
tttcattttgattatcttgtctttctttac	Protospacer
.  .  ************** ** *****

150. spacer 1.26|406985|30|NZ_LUEQ01000003|PILER-CR,CRISPRCasFinder,CRT matches to NC_011224 (Borrelia duttonii Ly plasmid pl11, complete sequence) position: , mismatch: 9, identity: 0.7

cggttgtttgattatcttgtgttgctttaa	CRISPR spacer
tttcattttgattatcttgtctttctttac	Protospacer
.  .  ************** ** *****

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

5. NZ_LUEQ01000011

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr_ID: NZ_LUEQ01000011.1|WP_061665674.1|41037_41646_-|hypothetical-protein

Click the colored protein region to show detailed information

Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_LUEQ01000011.1|WP_061665674.1|41037_41646_-|hypothetical-protein

41037_41646_-

202 aa aa

AcrIIA16

hit_Aca_id	identity	query_coverage	hit_coverage
anti_CRISPR3631\|WP_061665674.1\|AcrIIA16\|II-A\|Verified\|Listeria-monocytogenes	1.0	1	1.0

6. NZ_LUEQ01000007

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

2559 : 10845

Synechococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_020246648.1\|2559_3852_+	adenylosuccinate lyase	A0A1B3B081	Gordonia_phage	2.5e-17	33.0
WP_014931516.1\|3932_4646_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A0E3F9V5	Synechococcus_phage	8.8e-41	37.8
WP_003722248.1\|4657_4903_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA
WP_003733240.1\|4906_5590_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA
WP_061665588.1\|5582_7802_+	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	8.5e-159	41.1
WP_003722245.1\|7786_9214_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	1.1e-53	34.6
WP_061665589.1\|9232_10282_+	phosphoribosylformylglycinamidine cyclo-ligase	Q58MH8	Prochlorococcus_phage	7.8e-62	43.2
WP_003733243.1\|10278_10845_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	4.1e-25	35.9

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage