CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP016213	Listeria monocytogenes strain CFSAN029793, complete genome	2 crisprs	DEDDh,cas3,DinG,WYL,csa3,casR,RT	0	0	7	2

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP016213_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP016213_1

2990126-2990710

Orphan

Consensus_repeat	Method
GATGTAAGTAATTTTGATACNAGTTCAGTAACTNATATG	CRT

7 spacers

The CRISPR arrays of NZ_CP016213_1

>merge|NZ_CP016213|1|2990126-2990710|CRT
GATTTGAGTGGTCTTGATACTAGTGCGGTAACTACTATGTGGGATATGTTTAACAGCTGTAGGGCACTTGAGGAACTGGATGTAAGTAATTTTGATACGAGTTCAGTAACTAATATGTCTTACATGTTTTATGATAATAGAAACCTTGAGGTGCTGGATGTAAGCAACCTTGATACCGGTTCAGTAACTAATATGTATGCCATGTTTGAAGATTGTACTAGTCTTGAAGAGCTGGATGTAAGTAATTTTGATACGAGTTCAGTAACTGATATGTATAGAGTGTTTAATGGCTGTGAAAAACTGAAGAAACTAGATGTAAGTAATTTCGATACCAGTTCCGCTACTGCAATGGTTCAAATGTTTAGAAATTGTAGCGCCCTTGAGAAGTTGGATGTAAGTAATTTTAATACGAGCTTAGTAACTGATATGCGTGCCATGTTTGCTGGTTGTACTAGTCTTGAAGCGTTAGATGTAAGTAATTTTGATACGAGTTCAGTAACTAATATGGCTGCCATGTTTTCTGATAATGAAAAACTGGAGAAGCTTGATTTAAGTACCTTTGATACCAGTTCAGTGACTAACATG

>NZ_CP016213|1|1|2990126-2990710|CRT
GATTTGAGTGGTCTTGATACTAGTGCGGTAACTACTATG	TGGGATATGTTTAACAGCTGTAGGGCACTTGAGGAACTG
GATGTAAGTAATTTTGATACGAGTTCAGTAACTAATATG	TCTTACATGTTTTATGATAATAGAAACCTTGAGGTGCTG
GATGTAAGCAACCTTGATACCGGTTCAGTAACTAATATG	TATGCCATGTTTGAAGATTGTACTAGTCTTGAAGAGCTG
GATGTAAGTAATTTTGATACGAGTTCAGTAACTGATATG	TATAGAGTGTTTAATGGCTGTGAAAAACTGAAGAAACTA
GATGTAAGTAATTTCGATACCAGTTCCGCTACTGCAATG	GTTCAAATGTTTAGAAATTGTAGCGCCCTTGAGAAGTTG
GATGTAAGTAATTTTAATACGAGCTTAGTAACTGATATG	CGTGCCATGTTTGCTGGTTGTACTAGTCTTGAAGCGTTA
GATGTAAGTAATTTTGATACGAGTTCAGTAACTAATATG	GCTGCCATGTTTTCTGATAATGAAAAACTGGAGAAGCTT
GATTTAAGTACCTTTGATACCAGTTCAGTGACTAACATG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP016213.1\|WP_003725208.1\|2998783_2999887_+\|23S-rRNA-(adenine(2503)-C(2))-methyltransferase-RlmN	unknown	unknown	gnl\|CDD\|237717
NZ_CP016213.1\|WP_003721271.1\|3000613_3000979_+\|heme-oxygenase-IsdG	unknown	unknown	gnl\|CDD\|183970
NZ_CP016213.1\|WP_023550583.1\|2993989_2994475_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016213.1\|WP_023550311.1\|2985528_2987067_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|368260
NZ_CP016213.1\|WP_023550585.1\|2993496_2993970_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016213.1\|WP_003740428.1\|2979237_2980833_+\|PucR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225306
NZ_CP016213.1\|WP_003725209.1\|2999976_3000456_+\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|226231
NZ_CP016213.1\|WP_046811179.1\|2987330_2989334_+\|BspA-family-leucine-rich-repeat-surface-protein	unknown	unknown	gnl\|CDD\|308794
NZ_CP016213.1\|WP_003733207.1\|2996262_2996823_+\|TetR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|379534
NZ_CP016213.1\|WP_003725775.1\|2994883_2995150_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016213.1\|WP_026747116.1\|2991673_2993431_+\|BspA-family-leucine-rich-repeat-surface-protein	unknown	unknown	gnl\|CDD\|308794
NZ_CP016213.1\|WP_003728986.1\|2996932_2998633_+\|oleate-hydratase	unknown	unknown	gnl\|CDD\|227060
NZ_CP016213.1\|WP_003725186.1\|2974825_2976985_-\|transglutaminase	unknown	unknown	gnl\|CDD\|376628
NZ_CP016213.1\|WP_003721242.1\|2978134_2979082_-\|MoxR-family-ATPase	unknown	unknown	gnl\|CDD\|223786
NZ_CP016213.1\|WP_003734632.1\|2973953_2974709_-\|DUF4866-domain-containing-protein	unknown	unknown	gnl\|CDD\|379782
NZ_CP016213.1\|WP_003725189.1\|2980967_2982251_+\|cytosine-permease	unknown	unknown	gnl\|CDD\|271377
NZ_CP016213.1\|WP_003728093.1\|2982251_2983352_+\|DUF917-domain-containing-protein	unknown	unknown	gnl\|CDD\|226065
NZ_CP016213.1\|WP_009930283.1\|2994502_2994808_+\|LPXTG-cell-wall-anchor-domain-containing-protein	unknown	unknown	gnl\|CDD\|273478
NZ_CP016213.1\|WP_003728092.1\|2983344_2984895_+\|hydantoinase/oxoprolinase-family-protein	unknown	unknown	gnl\|CDD\|223223
NZ_CP016213.1\|WP_009929138.1\|2976981_2978130_-\|DUF58-domain-containing-protein	unknown	unknown	gnl\|CDD\|224635

Protein	Function_ID	Function_description	E-value
NZ_CP016213.1\|WP_003721271.1\|3000613_3000979_+\|heme-oxygenase-IsdG	gnl\|CDD\|183970	PRK13316, PRK13316, heme oxygenase IsdG.	3.55164e-70
NZ_CP016213.1\|WP_023550311.1\|2985528_2987067_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|368260	pfam05043, Mga, Mga helix-turn-helix domain. M regulator protein trans-acting positive regulator (Mga) is a DNA-binding protein that activates the expression of several important virulence genes in group A streptococcus in response to changing environmental conditions. This domain is found in the centre of the Mga proteins. This family also contains a number of bacterial RofA transcriptional regulators that seem to be largely restricted to streptococci. These proteins have been shown to regulate the expression of important bacterial adhesins. This is presumably a DNA-binding domain.	1.01429e-19
NZ_CP016213.1\|WP_003725208.1\|2998783_2999887_+\|23S-rRNA-(adenine(2503)-C(2))-methyltransferase-RlmN	gnl\|CDD\|237717	PRK14455, PRK14455, ribosomal RNA large subunit methyltransferase N; Provisional.	0
NZ_CP016213.1\|WP_003740428.1\|2979237_2980833_+\|PucR-family-transcriptional-regulator	gnl\|CDD\|225306	COG2508, COG2508, Regulator of polyketide synthase expression [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism].	2.42853e-59
NZ_CP016213.1\|WP_003725209.1\|2999976_3000456_+\|AraC-family-transcriptional-regulator	gnl\|CDD\|226231	COG3708, COG3708, Uncharacterized protein conserved in bacteria [Function unknown].	1.03205e-42
NZ_CP016213.1\|WP_046811179.1\|2987330_2989334_+\|BspA-family-leucine-rich-repeat-surface-protein	gnl\|CDD\|308794	pfam03382, DUF285, Mycoplasma protein of unknown function, DUF285. This region appears distantly related to leucine rich repeats.	1.33017e-30
NZ_CP016213.1\|WP_003733207.1\|2996262_2996823_+\|TetR-family-transcriptional-regulator	gnl\|CDD\|379534	pfam14278, TetR_C_8, Transcriptional regulator C-terminal region. This domain is a tetracycline repressor, domain 2, or C-terminus.	2.23521e-25
NZ_CP016213.1\|WP_026747116.1\|2991673_2993431_+\|BspA-family-leucine-rich-repeat-surface-protein	gnl\|CDD\|308794	pfam03382, DUF285, Mycoplasma protein of unknown function, DUF285. This region appears distantly related to leucine rich repeats.	5.49851e-29
NZ_CP016213.1\|WP_003728986.1\|2996932_2998633_+\|oleate-hydratase	gnl\|CDD\|227060	COG4716, COG4716, Myosin-crossreactive antigen [Function unknown].	0
NZ_CP016213.1\|WP_003725186.1\|2974825_2976985_-\|transglutaminase	gnl\|CDD\|376628	pfam01841, Transglut_core, Transglutaminase-like superfamily. This family includes animal transglutaminases and other bacterial proteins of unknown function. Sequence conservation in this superfamily primarily involves three motifs that centre around conserved cysteine, histidine, and aspartate residues that form the catalytic triad in the structurally characterized transglutaminase, the human blood clotting factor XIIIa'. On the basis of the experimentally demonstrated activity of the Methanobacterium phage pseudomurein endoisopeptidase, it is proposed that many, if not all, microbial homologs of the transglutaminases are proteases and that the eukaryotic transglutaminases have evolved from an ancestral protease.	4.40206e-28
NZ_CP016213.1\|WP_003721242.1\|2978134_2979082_-\|MoxR-family-ATPase	gnl\|CDD\|223786	COG0714, COG0714, MoxR-like ATPases [General function prediction only].	7.47241e-102
NZ_CP016213.1\|WP_003734632.1\|2973953_2974709_-\|DUF4866-domain-containing-protein	gnl\|CDD\|379782	pfam16160, DUF4866, Domain of unknown function (DUF4866). This family consists of uncharacterized proteins around 250 residues in length and is mainly found in various human gut Firmicute species and abundant in human gut metagenomic datasets. The function of this family is unknown.	2.71521e-121
NZ_CP016213.1\|WP_003725189.1\|2980967_2982251_+\|cytosine-permease	gnl\|CDD\|271377	cd11484, SLC-NCS1sbd_CobB-like, nucleobase-cation-symport-1 (NCS1) transporter CobB-like; solute-binding domain. This NCS1 subfamily includes Escherichia coli CodB (cytosine permease), and the Saccharomyces cerevisiae transporters: Fcy21p (Purine-cytosine permease), and vitamin B6 transporter Tpn1. NCS1s are essential components of salvage pathways for nucleobases and related metabolites; their known substrates include allantoin, uracil, thiamine, and nicotinamide riboside. NCS1s belong to a superfamily which also contains the solute carrier 5 family sodium/glucose transporters (SLC5s), and solute carrier 6 family neurotransmitter transporters (SLC6s).	2.40318e-96
NZ_CP016213.1\|WP_003728093.1\|2982251_2983352_+\|DUF917-domain-containing-protein	gnl\|CDD\|226065	COG3535, COG3535, Uncharacterized conserved protein [Function unknown].	0
NZ_CP016213.1\|WP_009930283.1\|2994502_2994808_+\|LPXTG-cell-wall-anchor-domain-containing-protein	gnl\|CDD\|273478	TIGR01167, Zinc_metalloprotease_ZmpB, LPXTG-motif cell wall anchor domain. This model describes the LPXTG motif-containing region found at the C-terminus of many surface proteins of Streptococcus and Streptomyces species. Cleavage between the Thr and Gly by sortase or a related enzyme leads to covalent anchoring at the new C-terminal Thr to the cell wall. Hits that do not lie at the C-terminus or are not found in Gram-positive bacteria are probably false-positive. A common feature of this proteins containing this domain appears to be a high proportion of charged and zwitterionic residues immediatedly upstream of the LPXTG motif. This model differs from other descriptions of the LPXTG region by including a portion of that upstream charged region. [Cell envelope, Other].	1.67487e-05
NZ_CP016213.1\|WP_003728092.1\|2983344_2984895_+\|hydantoinase/oxoprolinase-family-protein	gnl\|CDD\|223223	COG0145, HyuA, N-methylhydantoinase A/acetone carboxylase, beta subunit [Amino acid transport and metabolism / Secondary metabolites biosynthesis, transport, and catabolism].	1.15698e-106
NZ_CP016213.1\|WP_009929138.1\|2976981_2978130_-\|DUF58-domain-containing-protein	gnl\|CDD\|224635	COG1721, COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) [General function prediction only].	1.37557e-52

>NZ_CP016213.1|WP_046811179.1|2987330_2989334_+|BspA-family-leucine-rich-repeat-surface-protein
MKKFSMRVVLIISVLFIALGNANVSIAQERDTTNKLPEVEIGSLDTSDVIAEEVAQDKPAEVENLEEIPTTDDLMQNPNVLEKSVADSDDSDLTVVSSGAYWTLYYNSANGEYSLRMFGNVPSSKPSAWNSYLNSIKHIEIEEATLTGSFASYFRDTGFPVLESVRIEQCNLSGVTSFARAFEGDSESESPLEKVIIRDNYYQETPSLTNISRMFTLCRKLSELDVSGLNTSSVTKMDTIFSNANSLKELDVSHFDTSSVTDMSSMFAACNSLEELDVSNFDTSSVTNMKYMLSGLHLKKLDVSNFDTSSVNNMLHMFYVCNNLEELDLSNFDTSSVTNMFAMFAYCTSLKEIDVSNFDTSSVTTMSAMFFECSSLEALDLSNFDTSSVTTMASMFENSTALKSLYLDNFTDAASMTDMFKGTTSLTYLFVSHNLSTFNRLENTSWYDEKNWVQFSNLSQLQTYHRKQSEPTGYRKGAFLSLTMDAMGGEFEDAEEQKVQNKVSGEYWEEIVPVKEDYYFDGWYLDQNFTNKFDFSLPAAVSTTIYAKWVENYTVIIPASISLNEATELKVEGINRGSKALSVGLNRLATSVSESNELTLANTADTTVQCSAPLSWDGSENNPEKAILTLAPGSEITEGDAVMAIEAPENIQAGKYTGNLVFSINYE
>NZ_CP016213.1|WP_023550311.1|2985528_2987067_+|helix-turn-helix-domain-containing-protein
MREYLDSKSQKKVALLEKIFYAENHTSTQEELLNDLNITYPTLISTIKTINFDIERFGYKAFSIVHSAPNLSYTLKISDNCSIQLIINAYIRESPKFQILETLLLASFPNLQALAKKVHVSYSGIKKEIKELNEELRERNLSISTGNQVEITGDEFSLRIFYAFLFLVAYSGDRWPFSFVQYDEITDILESCPKEIYRANSIDKAMMIHYYVAMHLLRDRMNCQIDTTRQFKVALYKACTEESKKSESAFIKKVAKQLPNRNYKEMTYTTQIILSTIVAFGSYSSIEKMPSFFYMDEQLEEMGFMKLVDFASEQVNDNLSIPFSEKEMELLRYSFASINYRYFLLDNLINKFNNIVPGYTNLDRNIRKIHKVNHLEPLISQLVNLKEMDPLKPFEERLASDYLIILDKRIDFSIHTLPIKVTILSTISNETAVFDFMRYFSSYYNLEIINQVDPVVDLYISDFSVSPEVLTSLRINQPIIYVNTRWLESDYVKINDNLAKIARKKFIANKKN
>NZ_CP016213.1|WP_003728092.1|2983344_2984895_+|hydantoinase/oxoprolinase-family-protein
MYKIGIDVGGTNTDAVILDENQQLIHSVKMPTSEDIETGITESLHRVLSETGIDRSKVTHAMLGTTQCTNAIVERKKLAKVGVLRLGYPATASVLPYTAWPEDMVGFLSGKYKLTGGGYEYDGQVLSEINEAEIRETLASWKGEVESVAVVGVFSSLKNDQELAVQKIIEEELGADIPVSISSSVGSVGLIERENATILNAALFKVIAATSDGFEKALEQEGIAHAEIYLCQNDGTLMSLNYARQFPILTIACGPTNSIRGASYLAGLKDAMVLDVGGTTSDIGVLTDGFPRESSLAVDVGGVRTNFRMPDIISIGLGGGSIVREKDGDITIGPDSVGYRISEEALVFGGKTMTTTDIAVRLGRAEIGNPELVAHIPTDFAEKAYKKIAEMTEDAIDKMKTSSGSVSLVLVGGGSVIIPDEISGVAQIFRDKNGPVANAIGASISQISGQYEQIYIYSQIEREEALQDAEQKAREQATLAGAVTDSIEVVEVEEIPLAYHPGNATRLRVKVVGNLV
>NZ_CP016213.1|WP_003728093.1|2982251_2983352_+|DUF917-domain-containing-protein
MRYLDEQAIENIAIGAAFLGTGGGGDPYIGKMMALTAIKKHGPIKLLSPEEIADDDYFIPAAMMGAPSVLIEKFPKGDEFVRVFEKLGRYVGKEVKGTFPMEAGGVNSMIPIVVAAQLGLPMVDCDGMGRAFPELQMVTFHLDGISATPMAITDEKGNIGIMETIDNKWTERLARVTTVEMGASSLVSLYPCNGAQIKQSSIKNIVTLSEEIGKVIRETSMDEAEKLQKLLDVTHGYHLFEGKITDVVRETRAGFNFGRVKIDGLNKDTGSEVIVHFQNENLVAEKNGEPIAITPDLICMVDLETLMPVTTEALKYGKRVRVMALPADDAWRTDKGIETVGPRYFGYDVDFEPLEELVKKEERRHV
>NZ_CP016213.1|WP_003725189.1|2980967_2982251_+|cytosine-permease
MTEKKSVEQTQSWQSLAFVWTGAMICVPSLLVGGTLISGMPLWEAILIALLGYGVIVLFMIYQGMQSSDLGIPAVSVASQVFGEQGSKKIISILLAIACLGWFGIQANVCGAAFSQFLGIYGINLPVPVSSLIWGVIMLLSAIYGIRILSILNYIAVPVLLFVCIYGLVVSLNDGGLAIVENYKPAGSMSFMTGLAITIGSFALGAVIAGDYSQYTKSRKDVVKAAIVGILPSGVLMITVGAVLALTAGTADISVVFTNLGLPVLGIIGLILAAWTTNAVNAFSGGIAIINVFNISEKYHKVAVAVAGGLGTILAVIGILNHFVPIMSVLSAMVPPVAGVMIASYWIVQKGDKSKWAPVPGVNWLGVSSWLVGAVIAGIPVILTFFPELPQLPNQPLIGIILSLAVYLIGAKVLSGKTNNVENLEGK
>NZ_CP016213.1|WP_003740428.1|2979237_2980833_+|PucR-family-transcriptional-regulator
MSVKLADLMKLPSLKEAKVVSGKSGLSKLVSSISVLEYTEVALLEDDLFDNDEFYGSEIVVSAFVNIRDDVEAQCRTIERLHKVGEVALILYYVGIFVPKMDQKLIDFANELDFTIIVMPENEMSLRYSEVIYEVVEAIVKQEMTDTNFVTESLEQISSVRPPQRNIDTTLKILSDRTHTSLVLTDNSFQVINSITWPRTRHWDFERIIEASKQIGEHELVQLTLDERDFYTARKPIFQDGMQAMHLFMMKEKGVLTADVVMQITEVVQVFMNLWGRNYVEISTAELMKAILNDESVKMRRLGKILNVDVSSIKWMWLVKTEEIRDNEQVLAELKSFVASHFQVSLIDLFEDNIVVLLDNSVAQRDRTHTANEFAMMMKEHGIDLKITVCQGMEQTSDVQSAYSLVNEYKNAANAIYANKSIYSLQEIDFAAKCVEIVDRGELAIAEQMRPLKPLEDNDELIETLSVFLLEGESNYNQAAELLFLHKNTIKYRIQRINELLQYPATKIPESYNLYLAVAIRRILGGNNNNK
>NZ_CP016213.1|WP_003721242.1|2978134_2979082_-|MoxR-family-ATPase
MSIEPSIKIEEIINEVEKVIVGKRHVVKLSLTALLAGGHVLLEDVPGVGKTMMVRTLSKTIGVSFKRIQFTPDLLPADVTGVSIFNPETRDFEFRPGPVMGNIVLADEINRTAPRTQAALLEGMAENSVTVDGITRKLANPFFVMATQNPIEYEGTYALPEAQLDRFLLKINIGYPTVEEEMQLLTLKQYQDPLDQTQQVVTLSELLDLKNKAKQVFIDDVLKNYIIRLVDATRKHPSVALGISPRGSLAFMQAAQAFALIEGRDYVIPDDIQYLAPYIFTHRLILKSEAYYNEETAESIIASILKNTSVPVEKR
>NZ_CP016213.1|WP_009929138.1|2976981_2978130_-|DUF58-domain-containing-protein
MLKKRLLLAFRWIIMLIIYAGLWTYTLFQGDTASWFLTYFFSFILLLLFLSSIYPLKAWKVNRRFVKNTYHDGDLIDMQVSFTRKSRYPVGYLLFQQKIPASFGNVSARQQVVYPLFKKHFTVTLAGFVGVRGIHSFPPVDVETSDAFGLLERSRQLSSEKSLTIYPTYFPDVLEKISEASPENERNAAYWTLKKNSNLHSLREFSSGDRISLIDWKSSAKSDQLMTREFENSATSRLSVIFYGASHPNFELSLRAAYSFIRKISEDNGEIRVTLLGDQTSKFAPAKGTSRLQDISTAFAEIAPVDSLTLQESLDSNLHSGEKILLFTPCIDTMLMQKVTRLTDNKQLQIITFQSEHSKAMDAPAIFLEPASLLSRWEREAK
>NZ_CP016213.1|WP_003725186.1|2974825_2976985_-|transglutaminase
MKRYLTLVMLFILSVLLISEWIYPFAELTELSTANWIILFITLSLGSFFLRLKYYWTIPLHIVMIIFVSGIYYAKGGILAGNWFVSFFQITFNGFRDMVQFRSSDISMDFILIVFLIALWLLSYITTYSILRKQRVMSVLVLTVAYLAVINTFTDYNSNWAIVRTVLEGFLLLHLALASRIAAPNRISADSLKRNGLFYHIFVILLLAVFVFSSLMLPKKAPIFPDPVPTIKNALGINTTRTVGYSEDDTTLGGALKKDNATVFTARAEKGHYWRVESKTVYTGTGWANANSADVISFSSGDNFPIQLTEQTTGATNTAEISFASSNDYMPYPYGTQTVNGAVDSFSANLTIERVGPVDTIKNYTVQLKTPVYNIEKMQNADFSTLSNAFVSQYTQTPKDLPDRVTKLANKVTKDADSIYDKTKAIERYLSASGTFTYSTEDAKETPRGADYVDQFLFETQIGYCDNFSTSMVVMLRSLGIPARWAKGYTPGEGEKKENDAKTTYTITNNNAHSWPEVFFPGTGWVPFEPTATFSNPENFQEPTTETANKPETPNDSTSTPETPNTADKTPEQDNGSSSTGETPKKEEPKTETAASNFEIPSWVWWIPAGLVVTLLALAIIFRRRIRRYLLLRSLRNSPEFGKTYHRLMKLLASYGYVRESSETLRHFSTRVDAELTTTEFSRLTKMYEAQIYSNNLTEKVITAEETQLVQQVIARLTK
>NZ_CP016213.1|WP_003734632.1|2973953_2974709_-|DUF4866-domain-containing-protein
MTTIFPKEQNVAPLFEQILANPTACRRFKDVFLDNLESYQETRGFEKDDTLFAKIILSAYRQSDVSALLLGVCGRTLFELLRQAFLIPKKLTVDNPFFLTDKEGNFIAKKDDISNREQEKFQEIYQSDLHHSETTIFLVDDDDIIHSYEPDFSISTKRINKKRGILVLYSLPDTLKLGMTESEVYAFIWKTFLHIQEIIPSSRIFYGQETSENADELGVFLPIHHFEKKMLQNIEQVNELVDALREQMVNK
>NZ_CP016213.1|WP_026747116.1|2991673_2993431_+|BspA-family-leucine-rich-repeat-surface-protein
MKKFSMRVVLIISVLFIALGSANVSTAQERDTTNKLPEVELGSLDTSNIIAEEVAQEKPAEVEQLEEIPTTDELMQNPDVLEQPVADSDDTDLTVVSSGDFWTIYRNTVNNEYSLCMFGNVPSSRPTAWNTYLNRIKHIEIEEATLTGSFASYFSGDYFTVLESVKIEQCNLSGVTSFEKAFYNSGIEKVIIRDNDYPTAPSLLTTQYMFQLCRKLSELDLSGLDTSAITNIYGMFQFCSGLEELDLSHFDTSSVTNMYSMFSGCGSLEILDVSNWDTSSVTNMNRMFQNCTSLEELDLSTFDTSSMTDMGMMFNGCTALKSLYLDNFTDAAIMTDMFTGTTSLTYLFVSHNLSTFNNLENTSWYDEKNWVQFSNLSQLQTYHRNQSEPTGYRKGAFLSLTMDAMGGEFEDAEEQKVQNKISGEYWEEVIPVKEGHYFDGWYLDQNFTNKFDFSLPAAVSTTIYAKWVENYTVVIPASISLNEATELKVEGINRGSKTLSVGLNYGETTISENNKLTLSNTADATVQCLVPLSWDGSENNPENAILTLAPGSEITEGDAVMEIKSPENIQAGKYTGNVVFSIKYE
>NZ_CP016213.1|WP_023550585.1|2993496_2993970_+|hypothetical-protein
MKKKRVVIISLLLLLVSVIGISSYFLFKDKINLLDVDPSAVEWNGKKQKDTSGEENTIAIPGFEKVTLYANETTQAVNFHNPEINDCYFKISLIHPDGSVLWISDLIEPGKGMYSIELEKPLAVGEYENAVLKYECFSLNDQSPLNGSEINLKLVVV
>NZ_CP016213.1|WP_023550583.1|2993989_2994475_+|hypothetical-protein
MNKLVLSTLSVAAMGMVIFSGGTAYAADKEGNTVVEYSVEGDYTLVVPEKVNLSNDNATEMSVKTINRNLEPGKEVEVTLSSGLSADGEIELQRVGATSDVITSSFKSNNSVVPMANPIIGSFSGYAMEETEVSKIQIGNPQGDKKAGAYQTTLTFTAAFK
>NZ_CP016213.1|WP_009930283.1|2994502_2994808_+|LPXTG-cell-wall-anchor-domain-containing-protein
MKRKLVLAMVLISFCGMFLLSPERVQASQTVVEVFISEDDLDVSEENIQEIPKKELAASSDKDNKQHTLPKAGDTVTNYTLLGLVLILIWLIMQRKRKKKE
>NZ_CP016213.1|WP_003725775.1|2994883_2995150_+|hypothetical-protein
MARIEYEEKIQKSLLVLYFRGSTIQSICREYGIPRYEFHKWMKLHDADKLETKEVKTFLQIRELKQQKNKLEEEILFLNEAINLLESP
>NZ_CP016213.1|WP_003733207.1|2996262_2996823_+|TetR-family-transcriptional-regulator
MAESLITKKAIAGGLMELCQHKRFEKISIADITNICGLNRQTFYYHFTDKYDLLTWTYENDFFHCLADGITLGNWDKHVLKMLESIKENADFYKNTVSADASILSFCFSKLTNSLFMDLFEKIDTNGAVNEADRVFYAEFFSYGCSGVLIKWITRGFKEAPETIANQLFRLAKDTEFLANSMYREN
>NZ_CP016213.1|WP_003728986.1|2996932_2998633_+|oleate-hydratase
MKNKKRTLVALTGAAIGTGIAAKKISEQKAAEKERAVDEAIKARYYGDKQVYFVGGGIASLAGAVYLIRDANFDGKNIHIIEGMHILGGSNDGAGSVEHGFVCRGGRMLNEETYENFWDLFSSIPSLDMPNFSVTEEILNFDHLHPTHAQARLVDKDRNILDAHSMGFNNNDRMLMTKLLATPEEKLDNLTIRDWFDEHFFETNFWYMWQTTFAFQKWSSLFEFRRYMNRMMLEFSRIDTLEGVTRTPLNQYESLILPLKTFLDKHHVDFTINQTVEDIDFKDAPGITATALHLSDGSTIELGPDDDVIMTNACMTDSATLGDMNTPAPKPEEKPISGELWYKVAQKKPNLGNPEPFFGHEEETNWQSFTVTCHGDKLLKRIERFTGNIPGSGALMTFKDSNWLMSTVVAAQPHFKAQDANTTIFWGYGLYPDRVGDFVKKPMKECTGEEILYELMCHLNWQDDFEEIKADIINVIPCYMPYIDAQFEPRAMSDRPAVVPEGSTNFAMISQFVEIPKDMVFTEEYSVRAARIAVYTLLDIDKKICPVTPHNRDPKVLAKATQTMFR
>NZ_CP016213.1|WP_003725208.1|2998783_2999887_+|23S-rRNA-(adenine(2503)-C(2))-methyltransferase-RlmN
MEKSSIYGLTWTKLTEWLEAHGQKKFRATQVWDWLYRKRVKTFEEMSNVPKETIELLTANFVMNTLEEQVVQESTDGTTKYLFKLSDGNLIETVMMKQEYGLSVCVTTQVGCNIGCTFCASGLLKKSRDLTAGEIVEQIMNVQHYLDGRNLEERVSHVVVMGIGEPFDNYDNVMDFLRVINHDKGLAIGARHITVSTSGLAPRIIDFANEDFQVNLAISLHAPNNELRTSIMRINKTYSIEKLMEAIHYYVNKTNRRITFEYIMLKGVNDHKKEALELAALLGEHRHLAYVNLIPYNPVDEHIDYERSTKEDVLAFYDTLKKNGINCVIRREHGTDIDAACGQLRSKQIKRVGVRERMKQKQAAAEE
>NZ_CP016213.1|WP_003725209.1|2999976_3000456_+|AraC-family-transcriptional-regulator
MEVEIVERNAFTAVGKKRTFSVENDAQKEKISQFWQEANTNGDAERINELAEFATIDGILGVCKMNGDKMDYYIAIESELTPPADMEKLIIPASKWAIFKSVGPLPSAIQKVWEYIYGEWFQTSNYAHGNAPELEVYTEGDTTAADYYSEVWIPVVEKE
>NZ_CP016213.1|WP_003721271.1|3000613_3000979_+|heme-oxygenase-IsdG
MIIVTNTIKVEKGAAEHVIRQFTGANGDGHPTKDIAEVEGFLGFELWHSKPEDKDYEEVVVTSKWESEEAQRNWVKSDSFKKAHGRTKDTREQREDRKGIVGNAIARFEVVHVQNPVIVEK

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Crispr_ID: NZ_CP016213_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP016213_2

2992346-2992603

Orphan

Consensus_repeat	Method
GATACCAGTTCCGTTACTAATATG	CRISPRCasFinder

3 spacers

The CRISPR arrays of NZ_CP016213_2

>merge|NZ_CP016213|2|2992346-2992603|CRISPRCasFinder
GATACGAGTGCTATAACTAATATATATGGCATGTTTCAATTTTGCTCTGGTCTTGAAGAGTTAGATTTAAGTCATTTTGATACCAGTTCCGTTACTAATATGTATTCCATGTTTTCGGGTTGTGGATCACTGGAGATTTTGGATGTAAGCAATTGGGATACGAGTTCCGTTACTAATATGAATAGAATGTTTCAAAATTGTACTAGTCTTGAAGAGCTAGATTTAAGTACCTTTGATACCAGTTCAATGACTGACATG

>NZ_CP016213|2|1|2992346-2992603|CRISPRCasFinder
GATACGAGTGCTATAACTAATATA	TATGGCATGTTTCAATTTTGCTCTGGTCTTGAAGAGTTAGATTTAAGTCATTTT
GATACCAGTTCCGTTACTAATATG	TATTCCATGTTTTCGGGTTGTGGATCACTGGAGATTTTGGATGTAAGCAATTGG
GATACGAGTTCCGTTACTAATATG	AATAGAATGTTTCAAAATTGTACTAGTCTTGAAGAGCTAGATTTAAGTACCTTT
GATACCAGTTCAATGACTGACATG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP016213.1\|WP_003725208.1\|2998783_2999887_+\|23S-rRNA-(adenine(2503)-C(2))-methyltransferase-RlmN	unknown	unknown	gnl\|CDD\|237717
NZ_CP016213.1\|WP_003721271.1\|3000613_3000979_+\|heme-oxygenase-IsdG	unknown	unknown	gnl\|CDD\|183970
NZ_CP016213.1\|WP_023550583.1\|2993989_2994475_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016213.1\|WP_023550311.1\|2985528_2987067_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|368260
NZ_CP016213.1\|WP_003740428.1\|2979237_2980833_+\|PucR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225306
NZ_CP016213.1\|WP_023550585.1\|2993496_2993970_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016213.1\|WP_003725209.1\|2999976_3000456_+\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|226231
NZ_CP016213.1\|WP_003731249.1\|3001252_3003016_+\|RNA-directed-DNA-polymerase	RT	pfam00078_RT_CAS-I:CAS-III	gnl\|CDD\|238824
NZ_CP016213.1\|WP_046811179.1\|2987330_2989334_+\|BspA-family-leucine-rich-repeat-surface-protein	unknown	unknown	gnl\|CDD\|308794
NZ_CP016213.1\|WP_003733207.1\|2996262_2996823_+\|TetR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|379534
NZ_CP016213.1\|WP_026747115.1\|2989468_2991538_+\|BspA-family-leucine-rich-repeat-surface-protein	unknown	unknown	gnl\|CDD\|308794
NZ_CP016213.1\|WP_003725775.1\|2994883_2995150_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016213.1\|WP_009930283.1\|2994502_2994808_+\|LPXTG-cell-wall-anchor-domain-containing-protein	unknown	unknown	gnl\|CDD\|273478
NZ_CP016213.1\|WP_003728986.1\|2996932_2998633_+\|oleate-hydratase	unknown	unknown	gnl\|CDD\|227060
NZ_CP016213.1\|WP_003725186.1\|2974825_2976985_-\|transglutaminase	unknown	unknown	gnl\|CDD\|376628
NZ_CP016213.1\|WP_003721242.1\|2978134_2979082_-\|MoxR-family-ATPase	unknown	unknown	gnl\|CDD\|223786
NZ_CP016213.1\|WP_003725189.1\|2980967_2982251_+\|cytosine-permease	unknown	unknown	gnl\|CDD\|271377
NZ_CP016213.1\|WP_003728093.1\|2982251_2983352_+\|DUF917-domain-containing-protein	unknown	unknown	gnl\|CDD\|226065
NZ_CP016213.1\|WP_003728092.1\|2983344_2984895_+\|hydantoinase/oxoprolinase-family-protein	unknown	unknown	gnl\|CDD\|223223
NZ_CP016213.1\|WP_009929138.1\|2976981_2978130_-\|DUF58-domain-containing-protein	unknown	unknown	gnl\|CDD\|224635

Protein	Function_ID	Function_description	E-value
NZ_CP016213.1\|WP_003721271.1\|3000613_3000979_+\|heme-oxygenase-IsdG	gnl\|CDD\|183970	PRK13316, PRK13316, heme oxygenase IsdG.	3.55164e-70
NZ_CP016213.1\|WP_023550311.1\|2985528_2987067_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|368260	pfam05043, Mga, Mga helix-turn-helix domain. M regulator protein trans-acting positive regulator (Mga) is a DNA-binding protein that activates the expression of several important virulence genes in group A streptococcus in response to changing environmental conditions. This domain is found in the centre of the Mga proteins. This family also contains a number of bacterial RofA transcriptional regulators that seem to be largely restricted to streptococci. These proteins have been shown to regulate the expression of important bacterial adhesins. This is presumably a DNA-binding domain.	1.01429e-19
NZ_CP016213.1\|WP_003725208.1\|2998783_2999887_+\|23S-rRNA-(adenine(2503)-C(2))-methyltransferase-RlmN	gnl\|CDD\|237717	PRK14455, PRK14455, ribosomal RNA large subunit methyltransferase N; Provisional.	0
NZ_CP016213.1\|WP_003740428.1\|2979237_2980833_+\|PucR-family-transcriptional-regulator	gnl\|CDD\|225306	COG2508, COG2508, Regulator of polyketide synthase expression [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism].	2.42853e-59
NZ_CP016213.1\|WP_003725209.1\|2999976_3000456_+\|AraC-family-transcriptional-regulator	gnl\|CDD\|226231	COG3708, COG3708, Uncharacterized protein conserved in bacteria [Function unknown].	1.03205e-42
NZ_CP016213.1\|WP_003731249.1\|3001252_3003016_+\|RNA-directed-DNA-polymerase	gnl\|CDD\|238824	cd01646, RT_Bac_retron_I, RT_Bac_retron_I: Reverse transcriptases (RTs) in bacterial retrotransposons or retrons. The polymerase reaction of this enzyme leads to the production of a unique RNA-DNA complex called msDNA (multicopy single-stranded (ss)DNA) in which a small ssDNA branches out from a small ssRNA molecule via a 2'-5'phosphodiester linkage. Bacterial retron RTs produce cDNA corresponding to only a small portion of the retron genome.	1.43128e-28
NZ_CP016213.1\|WP_046811179.1\|2987330_2989334_+\|BspA-family-leucine-rich-repeat-surface-protein	gnl\|CDD\|308794	pfam03382, DUF285, Mycoplasma protein of unknown function, DUF285. This region appears distantly related to leucine rich repeats.	1.33017e-30
NZ_CP016213.1\|WP_026747115.1\|2989468_2991538_+\|BspA-family-leucine-rich-repeat-surface-protein	gnl\|CDD\|308794	pfam03382, DUF285, Mycoplasma protein of unknown function, DUF285. This region appears distantly related to leucine rich repeats.	8.72154e-31
NZ_CP016213.1\|WP_003733207.1\|2996262_2996823_+\|TetR-family-transcriptional-regulator	gnl\|CDD\|379534	pfam14278, TetR_C_8, Transcriptional regulator C-terminal region. This domain is a tetracycline repressor, domain 2, or C-terminus.	2.23521e-25
NZ_CP016213.1\|WP_009930283.1\|2994502_2994808_+\|LPXTG-cell-wall-anchor-domain-containing-protein	gnl\|CDD\|273478	TIGR01167, Zinc_metalloprotease_ZmpB, LPXTG-motif cell wall anchor domain. This model describes the LPXTG motif-containing region found at the C-terminus of many surface proteins of Streptococcus and Streptomyces species. Cleavage between the Thr and Gly by sortase or a related enzyme leads to covalent anchoring at the new C-terminal Thr to the cell wall. Hits that do not lie at the C-terminus or are not found in Gram-positive bacteria are probably false-positive. A common feature of this proteins containing this domain appears to be a high proportion of charged and zwitterionic residues immediatedly upstream of the LPXTG motif. This model differs from other descriptions of the LPXTG region by including a portion of that upstream charged region. [Cell envelope, Other].	1.67487e-05
NZ_CP016213.1\|WP_003728986.1\|2996932_2998633_+\|oleate-hydratase	gnl\|CDD\|227060	COG4716, COG4716, Myosin-crossreactive antigen [Function unknown].	0
NZ_CP016213.1\|WP_003725186.1\|2974825_2976985_-\|transglutaminase	gnl\|CDD\|376628	pfam01841, Transglut_core, Transglutaminase-like superfamily. This family includes animal transglutaminases and other bacterial proteins of unknown function. Sequence conservation in this superfamily primarily involves three motifs that centre around conserved cysteine, histidine, and aspartate residues that form the catalytic triad in the structurally characterized transglutaminase, the human blood clotting factor XIIIa'. On the basis of the experimentally demonstrated activity of the Methanobacterium phage pseudomurein endoisopeptidase, it is proposed that many, if not all, microbial homologs of the transglutaminases are proteases and that the eukaryotic transglutaminases have evolved from an ancestral protease.	4.40206e-28
NZ_CP016213.1\|WP_003721242.1\|2978134_2979082_-\|MoxR-family-ATPase	gnl\|CDD\|223786	COG0714, COG0714, MoxR-like ATPases [General function prediction only].	7.47241e-102
NZ_CP016213.1\|WP_003725189.1\|2980967_2982251_+\|cytosine-permease	gnl\|CDD\|271377	cd11484, SLC-NCS1sbd_CobB-like, nucleobase-cation-symport-1 (NCS1) transporter CobB-like; solute-binding domain. This NCS1 subfamily includes Escherichia coli CodB (cytosine permease), and the Saccharomyces cerevisiae transporters: Fcy21p (Purine-cytosine permease), and vitamin B6 transporter Tpn1. NCS1s are essential components of salvage pathways for nucleobases and related metabolites; their known substrates include allantoin, uracil, thiamine, and nicotinamide riboside. NCS1s belong to a superfamily which also contains the solute carrier 5 family sodium/glucose transporters (SLC5s), and solute carrier 6 family neurotransmitter transporters (SLC6s).	2.40318e-96
NZ_CP016213.1\|WP_003728093.1\|2982251_2983352_+\|DUF917-domain-containing-protein	gnl\|CDD\|226065	COG3535, COG3535, Uncharacterized conserved protein [Function unknown].	0
NZ_CP016213.1\|WP_003728092.1\|2983344_2984895_+\|hydantoinase/oxoprolinase-family-protein	gnl\|CDD\|223223	COG0145, HyuA, N-methylhydantoinase A/acetone carboxylase, beta subunit [Amino acid transport and metabolism / Secondary metabolites biosynthesis, transport, and catabolism].	1.15698e-106
NZ_CP016213.1\|WP_009929138.1\|2976981_2978130_-\|DUF58-domain-containing-protein	gnl\|CDD\|224635	COG1721, COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) [General function prediction only].	1.37557e-52

>NZ_CP016213.1|WP_026747115.1|2989468_2991538_+|BspA-family-leucine-rich-repeat-surface-protein
MKKLSIRVILIVTIIFIACGSANVSIAQERDIINKLPEVELGSLYTSNLITEEVAQDKPAEVENLEQAPTTDDLVQNPDVLEQPIADSDDSDLTVVNSGDFWTIYRNTVNGEYSLHMFGNVPSSKPTAWNSYLNRIKHIEIEEATLTGNFSSYFRNNVFTVLESVRIERSNLSRVTSFALAFYGSGIEKVIIRDNNYPTAPSLLTTEGMFKNCSNLMEVDLSGLDTSAVTTMWDMFNSCRALEELDVSNFDTSSVTNMSYMFYDNRNLEVLDVSNLDTGSVTNMYAMFEDCTSLEELDVSNFDTSSVTDMYRVFNGCEKLKKLDVSNFDTSSATAMVQMFRNCSALEKLDVSNFNTSLVTDMRAMFAGCTSLEALDVSNFDTSSVTNMAAMFSDNEKLEKLDLSTFDTSSVTNMGTMFKNCTALKSLFLDNFTHAASSTDMFTGTTSLSYLFVSHNVSNFNGLENTNWYDEKNWVQFSNLSQLQTYHRKQSEPTGYRKGEFLSLTMDAMGGQFEDAEEQKVQSKISGEYWEEVIPVKEGHYFDGWYLDQNFTNKFDFSLPATVSATLYAKWVENYTVVIPASISLNEATELKVEGINRGSKTLSVGLNYEETTISESNKLTLSNTADTTVQCLAPLSWDGSETNPKNAILTLAPGSEITEGDAVMEIESPENIQAGTYTGNLVFSINYE
>NZ_CP016213.1|WP_046811179.1|2987330_2989334_+|BspA-family-leucine-rich-repeat-surface-protein
MKKFSMRVVLIISVLFIALGNANVSIAQERDTTNKLPEVEIGSLDTSDVIAEEVAQDKPAEVENLEEIPTTDDLMQNPNVLEKSVADSDDSDLTVVSSGAYWTLYYNSANGEYSLRMFGNVPSSKPSAWNSYLNSIKHIEIEEATLTGSFASYFRDTGFPVLESVRIEQCNLSGVTSFARAFEGDSESESPLEKVIIRDNYYQETPSLTNISRMFTLCRKLSELDVSGLNTSSVTKMDTIFSNANSLKELDVSHFDTSSVTDMSSMFAACNSLEELDVSNFDTSSVTNMKYMLSGLHLKKLDVSNFDTSSVNNMLHMFYVCNNLEELDLSNFDTSSVTNMFAMFAYCTSLKEIDVSNFDTSSVTTMSAMFFECSSLEALDLSNFDTSSVTTMASMFENSTALKSLYLDNFTDAASMTDMFKGTTSLTYLFVSHNLSTFNRLENTSWYDEKNWVQFSNLSQLQTYHRKQSEPTGYRKGAFLSLTMDAMGGEFEDAEEQKVQNKVSGEYWEEIVPVKEDYYFDGWYLDQNFTNKFDFSLPAAVSTTIYAKWVENYTVIIPASISLNEATELKVEGINRGSKALSVGLNRLATSVSESNELTLANTADTTVQCSAPLSWDGSENNPEKAILTLAPGSEITEGDAVMAIEAPENIQAGKYTGNLVFSINYE
>NZ_CP016213.1|WP_023550311.1|2985528_2987067_+|helix-turn-helix-domain-containing-protein
MREYLDSKSQKKVALLEKIFYAENHTSTQEELLNDLNITYPTLISTIKTINFDIERFGYKAFSIVHSAPNLSYTLKISDNCSIQLIINAYIRESPKFQILETLLLASFPNLQALAKKVHVSYSGIKKEIKELNEELRERNLSISTGNQVEITGDEFSLRIFYAFLFLVAYSGDRWPFSFVQYDEITDILESCPKEIYRANSIDKAMMIHYYVAMHLLRDRMNCQIDTTRQFKVALYKACTEESKKSESAFIKKVAKQLPNRNYKEMTYTTQIILSTIVAFGSYSSIEKMPSFFYMDEQLEEMGFMKLVDFASEQVNDNLSIPFSEKEMELLRYSFASINYRYFLLDNLINKFNNIVPGYTNLDRNIRKIHKVNHLEPLISQLVNLKEMDPLKPFEERLASDYLIILDKRIDFSIHTLPIKVTILSTISNETAVFDFMRYFSSYYNLEIINQVDPVVDLYISDFSVSPEVLTSLRINQPIIYVNTRWLESDYVKINDNLAKIARKKFIANKKN
>NZ_CP016213.1|WP_003728092.1|2983344_2984895_+|hydantoinase/oxoprolinase-family-protein
MYKIGIDVGGTNTDAVILDENQQLIHSVKMPTSEDIETGITESLHRVLSETGIDRSKVTHAMLGTTQCTNAIVERKKLAKVGVLRLGYPATASVLPYTAWPEDMVGFLSGKYKLTGGGYEYDGQVLSEINEAEIRETLASWKGEVESVAVVGVFSSLKNDQELAVQKIIEEELGADIPVSISSSVGSVGLIERENATILNAALFKVIAATSDGFEKALEQEGIAHAEIYLCQNDGTLMSLNYARQFPILTIACGPTNSIRGASYLAGLKDAMVLDVGGTTSDIGVLTDGFPRESSLAVDVGGVRTNFRMPDIISIGLGGGSIVREKDGDITIGPDSVGYRISEEALVFGGKTMTTTDIAVRLGRAEIGNPELVAHIPTDFAEKAYKKIAEMTEDAIDKMKTSSGSVSLVLVGGGSVIIPDEISGVAQIFRDKNGPVANAIGASISQISGQYEQIYIYSQIEREEALQDAEQKAREQATLAGAVTDSIEVVEVEEIPLAYHPGNATRLRVKVVGNLV
>NZ_CP016213.1|WP_003728093.1|2982251_2983352_+|DUF917-domain-containing-protein
MRYLDEQAIENIAIGAAFLGTGGGGDPYIGKMMALTAIKKHGPIKLLSPEEIADDDYFIPAAMMGAPSVLIEKFPKGDEFVRVFEKLGRYVGKEVKGTFPMEAGGVNSMIPIVVAAQLGLPMVDCDGMGRAFPELQMVTFHLDGISATPMAITDEKGNIGIMETIDNKWTERLARVTTVEMGASSLVSLYPCNGAQIKQSSIKNIVTLSEEIGKVIRETSMDEAEKLQKLLDVTHGYHLFEGKITDVVRETRAGFNFGRVKIDGLNKDTGSEVIVHFQNENLVAEKNGEPIAITPDLICMVDLETLMPVTTEALKYGKRVRVMALPADDAWRTDKGIETVGPRYFGYDVDFEPLEELVKKEERRHV
>NZ_CP016213.1|WP_003725189.1|2980967_2982251_+|cytosine-permease
MTEKKSVEQTQSWQSLAFVWTGAMICVPSLLVGGTLISGMPLWEAILIALLGYGVIVLFMIYQGMQSSDLGIPAVSVASQVFGEQGSKKIISILLAIACLGWFGIQANVCGAAFSQFLGIYGINLPVPVSSLIWGVIMLLSAIYGIRILSILNYIAVPVLLFVCIYGLVVSLNDGGLAIVENYKPAGSMSFMTGLAITIGSFALGAVIAGDYSQYTKSRKDVVKAAIVGILPSGVLMITVGAVLALTAGTADISVVFTNLGLPVLGIIGLILAAWTTNAVNAFSGGIAIINVFNISEKYHKVAVAVAGGLGTILAVIGILNHFVPIMSVLSAMVPPVAGVMIASYWIVQKGDKSKWAPVPGVNWLGVSSWLVGAVIAGIPVILTFFPELPQLPNQPLIGIILSLAVYLIGAKVLSGKTNNVENLEGK
>NZ_CP016213.1|WP_003740428.1|2979237_2980833_+|PucR-family-transcriptional-regulator
MSVKLADLMKLPSLKEAKVVSGKSGLSKLVSSISVLEYTEVALLEDDLFDNDEFYGSEIVVSAFVNIRDDVEAQCRTIERLHKVGEVALILYYVGIFVPKMDQKLIDFANELDFTIIVMPENEMSLRYSEVIYEVVEAIVKQEMTDTNFVTESLEQISSVRPPQRNIDTTLKILSDRTHTSLVLTDNSFQVINSITWPRTRHWDFERIIEASKQIGEHELVQLTLDERDFYTARKPIFQDGMQAMHLFMMKEKGVLTADVVMQITEVVQVFMNLWGRNYVEISTAELMKAILNDESVKMRRLGKILNVDVSSIKWMWLVKTEEIRDNEQVLAELKSFVASHFQVSLIDLFEDNIVVLLDNSVAQRDRTHTANEFAMMMKEHGIDLKITVCQGMEQTSDVQSAYSLVNEYKNAANAIYANKSIYSLQEIDFAAKCVEIVDRGELAIAEQMRPLKPLEDNDELIETLSVFLLEGESNYNQAAELLFLHKNTIKYRIQRINELLQYPATKIPESYNLYLAVAIRRILGGNNNNK
>NZ_CP016213.1|WP_003721242.1|2978134_2979082_-|MoxR-family-ATPase
MSIEPSIKIEEIINEVEKVIVGKRHVVKLSLTALLAGGHVLLEDVPGVGKTMMVRTLSKTIGVSFKRIQFTPDLLPADVTGVSIFNPETRDFEFRPGPVMGNIVLADEINRTAPRTQAALLEGMAENSVTVDGITRKLANPFFVMATQNPIEYEGTYALPEAQLDRFLLKINIGYPTVEEEMQLLTLKQYQDPLDQTQQVVTLSELLDLKNKAKQVFIDDVLKNYIIRLVDATRKHPSVALGISPRGSLAFMQAAQAFALIEGRDYVIPDDIQYLAPYIFTHRLILKSEAYYNEETAESIIASILKNTSVPVEKR
>NZ_CP016213.1|WP_009929138.1|2976981_2978130_-|DUF58-domain-containing-protein
MLKKRLLLAFRWIIMLIIYAGLWTYTLFQGDTASWFLTYFFSFILLLLFLSSIYPLKAWKVNRRFVKNTYHDGDLIDMQVSFTRKSRYPVGYLLFQQKIPASFGNVSARQQVVYPLFKKHFTVTLAGFVGVRGIHSFPPVDVETSDAFGLLERSRQLSSEKSLTIYPTYFPDVLEKISEASPENERNAAYWTLKKNSNLHSLREFSSGDRISLIDWKSSAKSDQLMTREFENSATSRLSVIFYGASHPNFELSLRAAYSFIRKISEDNGEIRVTLLGDQTSKFAPAKGTSRLQDISTAFAEIAPVDSLTLQESLDSNLHSGEKILLFTPCIDTMLMQKVTRLTDNKQLQIITFQSEHSKAMDAPAIFLEPASLLSRWEREAK
>NZ_CP016213.1|WP_003725186.1|2974825_2976985_-|transglutaminase
MKRYLTLVMLFILSVLLISEWIYPFAELTELSTANWIILFITLSLGSFFLRLKYYWTIPLHIVMIIFVSGIYYAKGGILAGNWFVSFFQITFNGFRDMVQFRSSDISMDFILIVFLIALWLLSYITTYSILRKQRVMSVLVLTVAYLAVINTFTDYNSNWAIVRTVLEGFLLLHLALASRIAAPNRISADSLKRNGLFYHIFVILLLAVFVFSSLMLPKKAPIFPDPVPTIKNALGINTTRTVGYSEDDTTLGGALKKDNATVFTARAEKGHYWRVESKTVYTGTGWANANSADVISFSSGDNFPIQLTEQTTGATNTAEISFASSNDYMPYPYGTQTVNGAVDSFSANLTIERVGPVDTIKNYTVQLKTPVYNIEKMQNADFSTLSNAFVSQYTQTPKDLPDRVTKLANKVTKDADSIYDKTKAIERYLSASGTFTYSTEDAKETPRGADYVDQFLFETQIGYCDNFSTSMVVMLRSLGIPARWAKGYTPGEGEKKENDAKTTYTITNNNAHSWPEVFFPGTGWVPFEPTATFSNPENFQEPTTETANKPETPNDSTSTPETPNTADKTPEQDNGSSSTGETPKKEEPKTETAASNFEIPSWVWWIPAGLVVTLLALAIIFRRRIRRYLLLRSLRNSPEFGKTYHRLMKLLASYGYVRESSETLRHFSTRVDAELTTTEFSRLTKMYEAQIYSNNLTEKVITAEETQLVQQVIARLTK
>NZ_CP016213.1|WP_023550585.1|2993496_2993970_+|hypothetical-protein
MKKKRVVIISLLLLLVSVIGISSYFLFKDKINLLDVDPSAVEWNGKKQKDTSGEENTIAIPGFEKVTLYANETTQAVNFHNPEINDCYFKISLIHPDGSVLWISDLIEPGKGMYSIELEKPLAVGEYENAVLKYECFSLNDQSPLNGSEINLKLVVV
>NZ_CP016213.1|WP_023550583.1|2993989_2994475_+|hypothetical-protein
MNKLVLSTLSVAAMGMVIFSGGTAYAADKEGNTVVEYSVEGDYTLVVPEKVNLSNDNATEMSVKTINRNLEPGKEVEVTLSSGLSADGEIELQRVGATSDVITSSFKSNNSVVPMANPIIGSFSGYAMEETEVSKIQIGNPQGDKKAGAYQTTLTFTAAFK
>NZ_CP016213.1|WP_009930283.1|2994502_2994808_+|LPXTG-cell-wall-anchor-domain-containing-protein
MKRKLVLAMVLISFCGMFLLSPERVQASQTVVEVFISEDDLDVSEENIQEIPKKELAASSDKDNKQHTLPKAGDTVTNYTLLGLVLILIWLIMQRKRKKKE
>NZ_CP016213.1|WP_003725775.1|2994883_2995150_+|hypothetical-protein
MARIEYEEKIQKSLLVLYFRGSTIQSICREYGIPRYEFHKWMKLHDADKLETKEVKTFLQIRELKQQKNKLEEEILFLNEAINLLESP
>NZ_CP016213.1|WP_003733207.1|2996262_2996823_+|TetR-family-transcriptional-regulator
MAESLITKKAIAGGLMELCQHKRFEKISIADITNICGLNRQTFYYHFTDKYDLLTWTYENDFFHCLADGITLGNWDKHVLKMLESIKENADFYKNTVSADASILSFCFSKLTNSLFMDLFEKIDTNGAVNEADRVFYAEFFSYGCSGVLIKWITRGFKEAPETIANQLFRLAKDTEFLANSMYREN
>NZ_CP016213.1|WP_003728986.1|2996932_2998633_+|oleate-hydratase
MKNKKRTLVALTGAAIGTGIAAKKISEQKAAEKERAVDEAIKARYYGDKQVYFVGGGIASLAGAVYLIRDANFDGKNIHIIEGMHILGGSNDGAGSVEHGFVCRGGRMLNEETYENFWDLFSSIPSLDMPNFSVTEEILNFDHLHPTHAQARLVDKDRNILDAHSMGFNNNDRMLMTKLLATPEEKLDNLTIRDWFDEHFFETNFWYMWQTTFAFQKWSSLFEFRRYMNRMMLEFSRIDTLEGVTRTPLNQYESLILPLKTFLDKHHVDFTINQTVEDIDFKDAPGITATALHLSDGSTIELGPDDDVIMTNACMTDSATLGDMNTPAPKPEEKPISGELWYKVAQKKPNLGNPEPFFGHEEETNWQSFTVTCHGDKLLKRIERFTGNIPGSGALMTFKDSNWLMSTVVAAQPHFKAQDANTTIFWGYGLYPDRVGDFVKKPMKECTGEEILYELMCHLNWQDDFEEIKADIINVIPCYMPYIDAQFEPRAMSDRPAVVPEGSTNFAMISQFVEIPKDMVFTEEYSVRAARIAVYTLLDIDKKICPVTPHNRDPKVLAKATQTMFR
>NZ_CP016213.1|WP_003725208.1|2998783_2999887_+|23S-rRNA-(adenine(2503)-C(2))-methyltransferase-RlmN
MEKSSIYGLTWTKLTEWLEAHGQKKFRATQVWDWLYRKRVKTFEEMSNVPKETIELLTANFVMNTLEEQVVQESTDGTTKYLFKLSDGNLIETVMMKQEYGLSVCVTTQVGCNIGCTFCASGLLKKSRDLTAGEIVEQIMNVQHYLDGRNLEERVSHVVVMGIGEPFDNYDNVMDFLRVINHDKGLAIGARHITVSTSGLAPRIIDFANEDFQVNLAISLHAPNNELRTSIMRINKTYSIEKLMEAIHYYVNKTNRRITFEYIMLKGVNDHKKEALELAALLGEHRHLAYVNLIPYNPVDEHIDYERSTKEDVLAFYDTLKKNGINCVIRREHGTDIDAACGQLRSKQIKRVGVRERMKQKQAAAEE
>NZ_CP016213.1|WP_003725209.1|2999976_3000456_+|AraC-family-transcriptional-regulator
MEVEIVERNAFTAVGKKRTFSVENDAQKEKISQFWQEANTNGDAERINELAEFATIDGILGVCKMNGDKMDYYIAIESELTPPADMEKLIIPASKWAIFKSVGPLPSAIQKVWEYIYGEWFQTSNYAHGNAPELEVYTEGDTTAADYYSEVWIPVVEKE
>NZ_CP016213.1|WP_003721271.1|3000613_3000979_+|heme-oxygenase-IsdG
MIIVTNTIKVEKGAAEHVIRQFTGANGDGHPTKDIAEVEGFLGFELWHSKPEDKDYEEVVVTSKWESEEAQRNWVKSDSFKKAHGRTKDTREQREDRKGIVGNAIARFEVVHVQNPVIVEK
>NZ_CP016213.1|WP_003731249.1|3001252_3003016_+|RNA-directed-DNA-polymerase
MRKKVDVLSMDNEKAREFFMKPSSYFSQNLPKYFNLGYLLESAESKLGKKQLKKEMYFENKVYSNFPNVNFLIQTNKTISTYRPITLLHPYIYVDYVNFLTEIKIWEELKERFQNLQEEVKEKIICSSLPFDIETSKEDDSKKEMALNFWKSIEQETIKYSLGYNYLLKLDISNFYGSIYTHTLCWAFHGENYSKEAKNSKNLQNLTGDKCDRKFQWMNYGETVGIPQGNVISDLMSELLLAYIDSELVKKIDDEIDYKIIRYRDDYRIFTKRLEDSTLVKRELVVLLQRFKLNLGESKTSQTTDIISGSLKEDKMYWIEHDPVTKLTSDKFYRSPKILMKKSLEEHKNKKYKTRVFNEFFKKHFHNRTYQATLQKHLLIIKVFSDLYPNSGQLIAALHEFEGRLLDLNYKDFRNIGTEVEVLIAILVDIIKKNPKITEIGVKLLSTLLKKINFEEFEMKYLESNNSNEVQSDFEVKLAYINSVNHKLSNSNYNDYLEIWMQRLVVKNLKESTTLSDLYIEQSKNELVKFCNSIIRGKEMIQIFNEDWLKDEHKIELSKFINLNEIDKLTDIISDDEIYLAEYNQMT

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

575899 : 583322

Hokovirus(33.33%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003730941.1\|575899_576283_+	glycerol-3-phosphate cytidylyltransferase	A0A1V0SGE7	Hokovirus	1.4e-16	40.7
WP_069023903.1\|576304_577288_+	glycosyltransferase family 2 protein	A0A1V0SAH6	Catovirus	2.6e-11	33.8
WP_026747136.1\|577302_578316_+	glycosyltransferase	A0A1V0SAH6	Catovirus	1.8e-10	31.2
WP_003721509.1\|578524_580015_+	nicotinate phosphoribosyltransferase	G3MA18	Bacillus_virus	9.5e-114	49.7
WP_023550416.1\|580026_580851_+	ammonia-dependent NAD(+) synthetase	G3MA24	Bacillus_virus	1.3e-67	52.2
WP_009929872.1\|580863_581172_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
WP_009929871.1\|581232_581637_+	PTS lactose transporter subunit IIBC	NA	NA	NA	NA
WP_023550418.1\|581765_583322_+	glutamine-hydrolyzing GMP synthase	A0A1V0SH76	Hokovirus	6.0e-18	29.2

DBSCAN-SWA_2

679179 : 780862

113

Listeria_phage(77.61%)

integrase,protease,tRNA,holin,capsid,portal,terminase,tail

attL 704928:704951|attR 750270:750293

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003721619.1\|679179_680232_+\|tRNA	phenylalanine--tRNA ligase subunit alpha	A0A2K9L3A8	Tupanvirus	1.3e-29	34.9
WP_074046877.1\|680231_682640_+\|tRNA	phenylalanine--tRNA ligase subunit beta	NA	NA	NA	NA
WP_003721621.1\|682800_683502_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.0e-33	35.8
WP_023550449.1\|683515_686926_+	FtsX-like permease family protein	NA	NA	NA	NA
WP_003724750.1\|687023_687476_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_003724751.1\|687491_690692_+	MMPL family transporter	NA	NA	NA	NA
WP_003724752.1\|690795_691470_+	uracil-DNA glycosylase	A0A172DS90	Canid_alphaherpesvirus	3.4e-50	47.7
WP_012681263.1\|691507_692434_-	ribonuclease HIII	NA	NA	NA	NA
WP_003740576.1\|692587_692851_+	cell division protein ZapA	NA	NA	NA	NA
WP_003726937.1\|692850_693393_+	CvpA family protein	NA	NA	NA	NA
WP_003726936.1\|693484_695197_+	DNA polymerase/3'-5' exonuclease PolX	A0A2H4UV14	Bodo_saltans_virus	1.9e-17	24.5
WP_003734676.1\|695219_697577_+	endonuclease MutS2	Q94M10	Lactobacillus_phage	1.0e-21	50.4
WP_003723853.1\|697657_697969_+	thioredoxin	A0A1X9I9P5	Staphylococcus_phage	5.4e-19	39.6
WP_003726544.1\|698044_699856_+	excinuclease ABC subunit UvrC	NA	NA	NA	NA
WP_003726934.1\|700036_701251_+	aspartate kinase	NA	NA	NA	NA
WP_074046878.1\|701306_701801_-	YslB family protein	NA	NA	NA	NA
WP_003723856.1\|701948_702749_+	glutamate racemase	NA	NA	NA	NA
WP_003730987.1\|702761_703508_+	ribonuclease PH	NA	NA	NA	NA
WP_009928777.1\|703510_704122_+	XTP/dITP diphosphatase	Q66YC8	Euphorbia_ringspot_virus	8.7e-05	28.0
WP_003726034.1\|704158_704683_+	metallophosphoesterase	NA	NA	NA	NA
704928:704951	attL	NA	NA	NA	NA
WP_031660124.1\|704968_706123_-\|integrase	site-specific integrase	A0A059T688	Listeria_phage	1.1e-207	94.8
WP_014930257.1\|706252_707116_-	hypothetical protein	NA	NA	NA	NA
WP_026747145.1\|707167_707620_-	ImmA/IrrE family metallo-endopeptidase	R4IBK9	Listeria_phage	9.1e-76	87.3
WP_046811187.1\|707636_707960_-	helix-turn-helix transcriptional regulator	Q8W5Y0	Listeria_phage	1.2e-37	72.0
WP_003730994.1\|708360_708564_-	hypothetical protein	NA	NA	NA	NA
WP_003730995.1\|708630_708822_+	helix-turn-helix transcriptional regulator	A0A059T5F8	Listeria_phage	5.4e-22	87.1
WP_003730996.1\|708843_709086_+	hypothetical protein	A8ATD2	Listeria_phage	3.9e-41	93.8
WP_003730997.1\|709088_709274_+	hypothetical protein	A8ATD3	Listeria_phage	3.7e-28	98.4
WP_074046879.1\|709967_710219_+	hypothetical protein	Q8W5X5	Listeria_phage	3.4e-32	90.4
WP_074046970.1\|710239_710953_+	SAM-dependent DNA methyltransferase	A8ATD5	Listeria_phage	5.5e-128	97.0
WP_074046880.1\|710963_711908_+\|integrase	site-specific integrase	A8ATD6	Listeria_phage	5.0e-177	98.1
WP_074046881.1\|711919_712435_+	hypothetical protein	A8ATD7	Listeria_phage	1.1e-21	39.6
WP_074046883.1\|712680_712911_+	hypothetical protein	A0A059T7Z5	Listeria_phage	4.5e-39	97.4
WP_074046884.1\|712913_713474_+	DUF1642 domain-containing protein	A8ATY9	Listeria_phage	1.2e-88	82.8
WP_074046885.1\|713829_714228_+	hypothetical protein	D2IZL0	Enterococcus_phage	2.1e-23	71.4
WP_070007732.1\|714217_714418_+	hypothetical protein	NA	NA	NA	NA
WP_014930897.1\|714414_714666_+	hypothetical protein	NA	NA	NA	NA
WP_074046886.1\|714769_714952_+	hypothetical protein	NA	NA	NA	NA
WP_074046887.1\|714948_715350_+	hypothetical protein	A8ATZ6	Listeria_phage	2.1e-52	80.9
WP_074046888.1\|715346_715844_+	hypothetical protein	NA	NA	NA	NA
WP_074046889.1\|715878_716139_+	hypothetical protein	Q8W5W6	Listeria_phage	6.0e-16	49.4
WP_074046890.1\|716141_716366_+	hypothetical protein	A0A288TY32	Enterococcus_phage	2.0e-15	53.5
WP_074046891.1\|716532_716916_+	hypothetical protein	Q8W5W2	Listeria_phage	2.4e-61	93.7
WP_074046892.1\|716917_717397_+	siphovirus Gp157 family protein	R4IBM0	Listeria_phage	3.8e-48	67.7
WP_074046893.1\|717415_718108_+	AAA family ATPase	A8ATF0	Listeria_phage	3.2e-120	93.9
WP_074046894.1\|718171_719428_+	DEAD/DEAH box helicase	Q8W5V9	Listeria_phage	4.4e-237	96.9
WP_074046895.1\|719452_719938_+	DUF669 domain-containing protein	A0A059T5G4	Listeria_phage	6.5e-88	99.4
WP_074046896.1\|719960_722303_+	DNA primase	A0A059T6A4	Listeria_phage	4.2e-148	43.4
WP_014929539.1\|722598_722919_+	VRR-NUC domain-containing protein	Q8W5V6	Listeria_phage	1.2e-53	98.1
WP_039389924.1\|722915_723185_+	hypothetical protein	W0GBM0	Listeria_phage	5.3e-15	73.6
WP_074046971.1\|723295_723826_+	DUF3310 domain-containing protein	A0A059T7T5	Listeria_phage	3.3e-77	78.4
WP_009928014.1\|724017_724443_+	DUF722 domain-containing protein	Q8W5V4	Listeria_phage	2.7e-69	93.6
WP_070275360.1\|725053_725380_+	hypothetical protein	A0A059T5G5	Listeria_phage	8.6e-52	94.4
WP_074046897.1\|725379_725694_+	HNH endonuclease	A8ATF8	Listeria_phage	7.2e-56	96.2
WP_031646261.1\|725742_726099_+	hypothetical protein	A8AT94	Listeria_phage	2.6e-46	98.0
WP_023552366.1\|726095_727739_+\|terminase	terminase large subunit	A8AT95	Listeria_phage	0.0e+00	98.7
WP_023552368.1\|727750_728881_+\|portal	phage portal protein	A8AT96	Listeria_phage	2.2e-203	93.1
WP_023548924.1\|728877_729675_+\|protease	Clp protease ClpP	A0A059T5F2	Listeria_phage	1.2e-136	95.1
WP_003731647.1\|729701_730853_+\|capsid	phage major capsid protein	A8AT98	Listeria_phage	2.7e-201	93.2
WP_003731645.1\|731039_731339_+	hypothetical protein	A8ATA0	Listeria_phage	5.3e-48	100.0
WP_003731644.1\|731322_731688_+	hypothetical protein	A8ATA1	Listeria_phage	1.3e-64	100.0
WP_003731643.1\|731684_732086_+	hypothetical protein	A8ATA2	Listeria_phage	2.1e-68	100.0
WP_003731642.1\|732082_732466_+	hypothetical protein	A8ATA3	Listeria_phage	8.5e-67	99.2
WP_003731641.1\|732487_733075_+\|tail	phage tail protein	A8ATA4	Listeria_phage	9.9e-107	99.0
WP_023548918.1\|733146_733479_+	hypothetical protein	A8ATA5	Listeria_phage	4.3e-51	97.3
WP_074046898.1\|733693_738619_+\|tail	phage tail tape measure protein	A0A059T5F4	Listeria_phage	0.0e+00	94.0
WP_023553822.1\|738611_740261_+\|tail	phage tail protein	A0A059T682	Listeria_phage	0.0e+00	99.6
WP_074046899.1\|742556_743651_+	carbohydrate-binding protein CenC	A0A059T7R4	Listeria_phage	1.4e-199	97.5
WP_003722523.1\|743689_744055_+	hypothetical protein	Q9T1A0	Listeria_phage	7.4e-12	100.0
WP_003722522.1\|744067_744349_+\|holin	holin	A8ASL4	Listeria_phage	3.4e-41	94.6
WP_061663760.1\|744348_745194_+	peptidase M15	A0A059T7Y8	Listeria_phage	8.3e-139	95.1
WP_031645776.1\|745433_745613_+	hypothetical protein	A0A0B5CU31	Listeria_phage	3.5e-23	96.6
WP_031645777.1\|745612_746152_+	GNAT family N-acetyltransferase	A0A0B5CYP1	Listeria_phage	1.5e-77	79.2
WP_003731274.1\|746244_746742_-	AP2 domain-containing protein	A8ATW6	Listeria_phage	1.9e-87	95.8
WP_003731275.1\|746766_747216_-	anti-CRISPR protein AcrIIA1	A8ATW7	Listeria_phage	2.0e-75	98.7
WP_003731276.1\|747216_747468_-	hypothetical protein	A8ATW8	Listeria_phage	2.0e-40	100.0
WP_003731277.1\|747499_747733_-	hypothetical protein	A8ATW9	Listeria_phage	4.3e-13	100.0
WP_074046900.1\|748034_748268_+	hypothetical protein	A8ATC5	Listeria_phage	4.7e-36	98.7
WP_009915668.1\|748264_748456_+	hypothetical protein	A8ATC6	Listeria_phage	8.9e-25	87.3
WP_003726035.1\|748650_748752_-	hypothetical protein	A0A059T688	Listeria_phage	2.4e-05	66.7
WP_003726037.1\|749148_749622_+	hypothetical protein	NA	NA	NA	NA
WP_009928186.1\|749727_750090_+	hypothetical protein	NA	NA	NA	NA
WP_046811197.1\|750758_754889_+	LapB repeat-containing protein	NA	NA	NA	NA
750270:750293	attR	NA	NA	NA	NA
WP_003726042.1\|755011_756370_+	DUF1254 domain-containing protein	NA	NA	NA	NA
WP_003726043.1\|756412_757006_-	hypothetical protein	NA	NA	NA	NA
WP_003726044.1\|757142_757550_-	glyoxalase/bleomycin resistance/extradiol dioxygenase family protein	NA	NA	NA	NA
WP_003726045.1\|757714_758314_+	histidine phosphatase family protein	A0A1X9IGJ2	Lactococcus_phage	1.3e-29	41.0
WP_009928848.1\|758345_758606_-	hypothetical protein	NA	NA	NA	NA
WP_023550481.1\|758729_760142_+	DEAD/DEAH box helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	4.9e-51	32.0
WP_003726048.1\|760166_760430_+	DUF3116 domain-containing protein	NA	NA	NA	NA
WP_003727535.1\|760597_761074_+	8-oxo-dGTP diphosphatase	NA	NA	NA	NA
WP_003726050.1\|761111_761357_-	hypothetical protein	NA	NA	NA	NA
WP_003726051.1\|761353_762559_-	MFS transporter	NA	NA	NA	NA
WP_003726058.1\|762579_762765_-	hypothetical protein	NA	NA	NA	NA
WP_003726052.1\|762763_763423_+	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA
WP_003726053.1\|763462_763657_-	hypothetical protein	NA	NA	NA	NA
WP_003726054.1\|763723_764572_-	YitT family protein	NA	NA	NA	NA
WP_003726055.1\|765189_765903_+	trehalose operon repressor	NA	NA	NA	NA
WP_014929571.1\|765933_767580_-	alpha,alpha-phosphotrehalase	NA	NA	NA	NA
WP_003727531.1\|767598_769083_-	PTS system trehalose-specific EIIBC component	NA	NA	NA	NA
WP_003726723.1\|769200_769662_+	NUDIX hydrolase	NA	NA	NA	NA
WP_003726717.1\|769700_770165_-	hypothetical protein	NA	NA	NA	NA
WP_003726718.1\|770353_771268_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_023550483.1\|771293_772541_-	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	7.2e-107	51.8
WP_003726720.1\|772524_773355_-	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	3.6e-46	42.4
WP_003734523.1\|773501_774641_-\|protease	PrsW family intramembrane metalloprotease	NA	NA	NA	NA
WP_003723563.1\|774720_775116_-	helix-turn-helix transcriptional regulator	A9D9J6	Lactobacillus_prophage	1.3e-14	57.4
WP_003727524.1\|775266_775482_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_003727523.1\|775605_776139_+\|protease	matrixin family metalloprotease	NA	NA	NA	NA
WP_003731300.1\|776154_776820_+	hypothetical protein	NA	NA	NA	NA
WP_003727521.1\|777081_778020_+	hypothetical protein	NA	NA	NA	NA
WP_003723884.1\|778134_779418_+	trigger factor	NA	NA	NA	NA
WP_003723886.1\|779602_780862_+\|protease	ATP-dependent protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	1.4e-145	63.2

DBSCAN-SWA_3

1321430 : 1329716

Synechococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003726209.1\|1321430_1321997_-	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	8.3e-26	36.4
WP_003726210.1\|1321993_1323043_-	phosphoribosylformylglycinamidine cyclo-ligase	Q58MH8	Prochlorococcus_phage	3.2e-63	44.4
WP_003722245.1\|1323061_1324489_-	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	1.1e-53	34.6
WP_031644866.1\|1324473_1326693_-	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	1.7e-159	41.0
WP_003726212.1\|1326685_1327369_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA
WP_003722248.1\|1327372_1327618_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA
WP_003726214.1\|1327629_1328343_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A0E3F9V5	Synechococcus_phage	2.0e-40	38.3
WP_003729814.1\|1328423_1329716_-	adenylosuccinate lyase	A0A1B3B081	Gordonia_phage	2.5e-17	33.0

DBSCAN-SWA_4

1856470 : 1896917

Listeria_phage(98.15%)

plate,integrase,holin,capsid,portal,terminase,tail

attL 1856638:1856653|attR 1891672:1891687

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_074046911.1\|1856470_1856668_-	hypothetical protein	A8ATC6	Listeria_phage	7.0e-17	73.7
1856638:1856653	attL	NA	NA	NA	NA
WP_074046912.1\|1856664_1856898_-	hypothetical protein	A0A059T6E1	Listeria_phage	6.1e-36	94.8
WP_025370597.1\|1857457_1858159_-	DUF3800 domain-containing protein	R4IBV1	Listeria_phage	6.4e-129	97.8
WP_061725267.1\|1858306_1859158_-	peptidase M15	A0A059T7Y8	Listeria_phage	4.4e-140	95.1
WP_003722522.1\|1859157_1859439_-\|holin	holin	A8ASL4	Listeria_phage	3.4e-41	94.6
WP_003722523.1\|1859451_1859817_-	hypothetical protein	Q9T1A0	Listeria_phage	7.4e-12	100.0
WP_003722524.1\|1859844_1860003_-	hypothetical protein	Q9T1A1	Listeria_phage	6.0e-19	100.0
WP_003722525.1\|1860007_1860325_-	hypothetical protein	Q9T1A2	Listeria_phage	6.2e-55	100.0
WP_074046913.1\|1860336_1861410_-\|plate	phage baseplate upper protein	Q9T1A3	Listeria_phage	1.3e-189	96.4
WP_003722527.1\|1861409_1862438_-	hypothetical protein	Q9T1A4	Listeria_phage	4.6e-192	100.0
WP_003722528.1\|1862438_1863464_-	hypothetical protein	Q9T1A5	Listeria_phage	4.3e-198	98.2
WP_031644600.1\|1863472_1864291_-\|tail	phage tail family protein	Q9T1A6	Listeria_phage	3.6e-147	92.3
WP_074046914.1\|1864292_1869677_-	tape measure protein	Q9T1A7	Listeria_phage	0.0e+00	89.4
WP_031644596.1\|1869692_1870292_-	hypothetical protein	A0A0B5CTW0	Listeria_phage	8.1e-72	68.0
WP_031644594.1\|1870297_1870720_-	hypothetical protein	Q9T1A9	Listeria_phage	2.0e-69	99.3
WP_031644591.1\|1870774_1871107_-	Ig-like virion protein	Q9T1B0	Listeria_phage	4.1e-49	98.2
WP_031644589.1\|1871036_1871474_-	hypothetical protein	A0A0B5CYN3	Listeria_phage	1.2e-77	99.3
WP_010679811.1\|1871476_1871884_-	hypothetical protein	A0A0B5CU21	Listeria_phage	1.2e-66	98.5
WP_031644586.1\|1871883_1872222_-	hypothetical protein	Q9T1B3	Listeria_phage	8.3e-58	99.1
WP_031644585.1\|1872221_1872584_-	hypothetical protein	Q9T1B4	Listeria_phage	4.1e-63	97.5
WP_031644583.1\|1872583_1872979_-	hypothetical protein	A8ASJ8	Listeria_phage	8.2e-65	96.2
WP_074046915.1\|1872980_1873139_-	hypothetical protein	Q9T1B6	Listeria_phage	5.1e-18	96.2
WP_021496950.1\|1873138_1874038_-\|capsid	phage major capsid protein	A0A0B5CU19	Listeria_phage	9.0e-168	100.0
WP_010990217.1\|1874061_1874631_-	scaffold protein	Q9T1B8	Listeria_phage	7.4e-91	97.4
WP_074046916.1\|1875849_1877610_-\|portal	phage portal protein	A0A0B5D0F2	Listeria_phage	2.2e-266	93.3
WP_070779510.1\|1877622_1878954_-\|terminase	PBSX family phage terminase large subunit	A8ASJ2	Listeria_phage	6.7e-252	94.6
WP_070779502.1\|1878922_1879465_-\|terminase	terminase small subunit	A0A0B5CU16	Listeria_phage	3.4e-85	95.5
WP_074046917.1\|1879508_1879937_-	hypothetical protein	A8ASQ1	Listeria_phage	4.6e-13	38.6
WP_074046918.1\|1880405_1880840_-	hypothetical protein	A8ASQ1	Listeria_phage	1.4e-70	91.0
WP_031644575.1\|1880858_1881023_-	hypothetical protein	A8ASQ0	Listeria_phage	7.4e-20	94.4
WP_031644573.1\|1881151_1881556_-	endodeoxyribonuclease	A8AU00	Listeria_phage	2.7e-71	98.5
WP_003759675.1\|1881521_1881662_-	BH0509 family protein	A8ATZ9	Listeria_phage	4.7e-15	87.0
WP_039382681.1\|1881658_1881964_-	hypothetical protein	A8ATZ8	Listeria_phage	1.9e-37	83.2
WP_074046919.1\|1881995_1882475_-	single-stranded DNA-binding protein	A8ASP5	Listeria_phage	7.1e-79	94.4
WP_074046920.1\|1882531_1882774_-	hypothetical protein	R4ICD9	Listeria_phage	1.1e-40	96.2
WP_074046921.1\|1882770_1883295_-	hypothetical protein	A8ASP1	Listeria_phage	5.5e-32	83.8
WP_074046922.1\|1883416_1884097_-	hypothetical protein	A8ATD7	Listeria_phage	3.0e-115	90.3
WP_074046923.1\|1884109_1885054_-\|integrase	site-specific integrase	A8ATD6	Listeria_phage	2.3e-174	96.2
WP_074046924.1\|1885064_1885775_-	SAM-dependent DNA methyltransferase	A8ATD5	Listeria_phage	1.5e-125	95.4
WP_074046925.1\|1885771_1886707_-	DnaD domain-containing protein	A8ATY7	Listeria_phage	9.4e-152	91.0
WP_074046926.1\|1886726_1887542_-	recombinase RecT	Q9T172	Listeria_phage	5.9e-150	98.9
WP_003722563.1\|1887544_1888504_-	YqaJ viral recombinase family protein	A8ATY5	Listeria_phage	1.5e-173	96.9
WP_003722564.1\|1888738_1888927_-	hypothetical protein	Q9T175	Listeria_phage	1.8e-22	82.3
WP_074046927.1\|1889035_1889251_-	hypothetical protein	Q9T176	Listeria_phage	1.8e-26	90.1
WP_074046928.1\|1889247_1889781_-	hypothetical protein	A0A059T5F0	Listeria_phage	6.7e-78	87.9
WP_074046929.1\|1889903_1890683_-	phage antirepressor Ant	A8ASM6	Listeria_phage	7.1e-137	95.7
WP_003727749.1\|1890746_1890989_+	hypothetical protein	A0A059T7Q3	Listeria_phage	1.8e-38	100.0
WP_061109212.1\|1891174_1891456_-	hypothetical protein	A8ATX8	Listeria_phage	2.5e-39	98.9
WP_003733686.1\|1891481_1891766_-	hypothetical protein	A0A0B5D168	Listeria_phage	4.5e-41	85.1
1891672:1891687	attR	NA	NA	NA	NA
WP_003733687.1\|1891777_1891972_-	hypothetical protein	A0A059T6E5	Listeria_phage	1.4e-25	95.3
WP_003722568.1\|1891968_1892211_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_003722569.1\|1892366_1892843_+	helix-turn-helix domain-containing protein	A8ASM2	Listeria_phage	9.0e-42	62.0
WP_020975175.1\|1893001_1893169_+	hypothetical protein	NA	NA	NA	NA
WP_074046930.1\|1893223_1893925_+	hypothetical protein	A0A0B5D125	Listeria_phage	1.0e-86	85.8
WP_003722571.1\|1893945_1894626_+	hypothetical protein	NA	NA	NA	NA
WP_074046931.1\|1894689_1896048_+	recombinase family protein	Q8LTD8	Listeria_phage	1.1e-254	98.7
WP_003741076.1\|1896038_1896515_+	competence protein ComK	NA	NA	NA	NA
WP_003739618.1\|1896569_1896917_-	helix-turn-helix transcriptional regulator	A0A0A7RTK4	Clostridium_phage	9.9e-06	40.7

DBSCAN-SWA_5

2033384 : 2075835

Listeria_phage(94.83%)

integrase,holin,capsid,tail,terminase

attL 2035085:2035104|attR 2073376:2073395

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_009927819.1\|2033384_2033720_+	DUF898 family protein	S5MNN8	Brevibacillus_phage	3.6e-21	64.1
WP_009927821.1\|2033992_2034733_+	hypothetical protein	A8ASM1	Listeria_phage	2.3e-108	76.8
2035085:2035104	attL	NA	NA	NA	NA
WP_052713350.1\|2035135_2035339_-	hypothetical protein	A8ATX1	Listeria_phage	9.1e-28	85.1
WP_046336509.1\|2035335_2035569_-	hypothetical protein	A0A059T6E1	Listeria_phage	2.3e-35	96.1
WP_003731277.1\|2035870_2036104_+	hypothetical protein	A8ATW9	Listeria_phage	4.3e-13	100.0
WP_003731276.1\|2036135_2036387_+	hypothetical protein	A8ATW8	Listeria_phage	2.0e-40	100.0
WP_003731275.1\|2036387_2036837_+	anti-CRISPR protein AcrIIA1	A8ATW7	Listeria_phage	2.0e-75	98.7
WP_003731274.1\|2036861_2037359_+	AP2 domain-containing protein	A8ATW6	Listeria_phage	1.9e-87	95.8
WP_031645777.1\|2037451_2037991_-	GNAT family N-acetyltransferase	A0A0B5CYP1	Listeria_phage	1.5e-77	79.2
WP_031645776.1\|2037990_2038170_-	hypothetical protein	A0A0B5CU31	Listeria_phage	3.5e-23	96.6
WP_061663760.1\|2038409_2039255_-	peptidase M15	A0A059T7Y8	Listeria_phage	8.3e-139	95.1
WP_014929558.1\|2039254_2039536_-\|holin	phage holin	A8ATW3	Listeria_phage	6.7e-45	98.9
WP_003733957.1\|2039535_2039841_-	hypothetical protein	A0A059T5E6	Listeria_phage	1.8e-43	100.0
WP_074046932.1\|2039891_2042054_-	hypothetical protein	A8ATW1	Listeria_phage	0.0e+00	98.8
WP_003731724.1\|2042066_2043635_-	hypothetical protein	A8ATW0	Listeria_phage	4.7e-305	99.6
WP_074046933.1\|2043631_2048422_-\|tail	phage tail tape measure protein	A8ATV9	Listeria_phage	0.0e+00	96.3
WP_074046934.1\|2048426_2048738_-	hypothetical protein	A0A0B5D116	Listeria_phage	1.3e-41	96.7
WP_047934336.1\|2048734_2049166_-	hypothetical protein	A8ATV7	Listeria_phage	1.8e-73	98.6
WP_003733697.1\|2049220_2049910_-	Ig domain-containing protein	A8ATV6	Listeria_phage	2.8e-100	85.6
WP_010991155.1\|2049914_2050286_-	hypothetical protein	A0A0B5CTY4	Listeria_phage	5.5e-63	99.2
WP_074046935.1\|2050282_2050600_-	HK97 gp10 family phage protein	A8ATV4	Listeria_phage	1.1e-51	99.0
WP_074046936.1\|2050589_2050955_-	hypothetical protein	A8ATV3	Listeria_phage	4.9e-64	98.3
WP_031644307.1\|2050954_2051308_-	hypothetical protein	A8ATV2	Listeria_phage	3.8e-61	99.1
WP_031659979.1\|2051483_2052356_-	hypothetical protein	A8ATV0	Listeria_phage	3.6e-161	99.3
WP_046670970.1\|2052378_2052933_-	hypothetical protein	A8ATU9	Listeria_phage	7.4e-88	98.9
WP_074046937.1\|2053028_2054072_-\|capsid	minor capsid protein	A0A0B5D111	Listeria_phage	1.3e-197	98.3
WP_074046938.1\|2054076_2055633_-	hypothetical protein	A8ATU7	Listeria_phage	5.0e-299	99.0
WP_074046939.1\|2055647_2056976_-\|terminase	PBSX family phage terminase large subunit	A0A0B5CYJ6	Listeria_phage	8.5e-231	86.6
WP_068996124.1\|2056905_2057691_-	TerS	A0A0B5CTX0	Listeria_phage	4.2e-129	96.7
WP_068996231.1\|2057730_2057958_-	hypothetical protein	A8AU06	Listeria_phage	1.1e-32	96.0
WP_031643386.1\|2058037_2058670_-	hypothetical protein	A8AU05	Listeria_phage	2.1e-107	93.3
WP_074046940.1\|2058851_2059286_-	hypothetical protein	A8AU03	Listeria_phage	2.6e-72	94.4
WP_074046941.1\|2059425_2059809_-	DUF2481 domain-containing protein	A0A0B5CU14	Listeria_phage	2.6e-60	90.6
WP_074046942.1\|2059812_2060217_-	DUF1064 domain-containing protein	A8ASP7	Listeria_phage	4.0e-59	88.1
WP_074046943.1\|2060161_2060344_-	hypothetical protein	A8ASP6	Listeria_phage	3.4e-18	81.0
WP_074046944.1\|2060362_2060845_-	single-stranded DNA-binding protein	A8ATZ7	Listeria_phage	1.9e-76	93.1
WP_074046945.1\|2060844_2061246_-	hypothetical protein	A8ATZ6	Listeria_phage	3.8e-49	75.2
WP_074046946.1\|2061242_2061626_-	DUF1642 domain-containing protein	Q8W5X2	Listeria_phage	2.3e-32	93.0
WP_074046881.1\|2061871_2062387_-	hypothetical protein	A8ATD7	Listeria_phage	1.1e-21	39.6
WP_074046880.1\|2062398_2063343_-\|integrase	site-specific integrase	A8ATD6	Listeria_phage	5.0e-177	98.1
WP_074046970.1\|2063353_2064067_-	SAM-dependent DNA methyltransferase	A8ATD5	Listeria_phage	5.5e-128	97.0
WP_074046879.1\|2064087_2064339_-	hypothetical protein	Q8W5X5	Listeria_phage	3.4e-32	90.4
WP_074046948.1\|2064335_2065244_-	DnaD domain-containing protein	A0A0B5D175	Listeria_phage	1.8e-139	90.8
WP_031668129.1\|2065263_2066079_-	recombinase RecT	Q9T172	Listeria_phage	1.7e-149	98.9
WP_077947935.1\|2066081_2067041_-	YqaJ viral recombinase family protein	A0A0B5D133	Listeria_phage	3.4e-173	96.6
WP_074046949.1\|2067276_2067465_-	hypothetical protein	Q9T175	Listeria_phage	5.9e-21	77.4
WP_003731810.1\|2067573_2067810_-	DUF771 domain-containing protein	A8ATY2	Listeria_phage	1.9e-40	100.0
WP_015987420.1\|2067815_2068340_-	hypothetical protein	A8ATY1	Listeria_phage	6.3e-89	100.0
WP_015987419.1\|2068461_2069235_-	phage repressor protein/antirepressor Ant	A8ATY0	Listeria_phage	1.1e-140	100.0
WP_003731222.1\|2069818_2070172_-	hypothetical protein	A8ATX8	Listeria_phage	9.9e-54	100.0
WP_015987418.1\|2070168_2070405_-	hypothetical protein	A8ATX7	Listeria_phage	1.1e-37	100.0
WP_003731220.1\|2070408_2070660_-	helix-turn-helix transcriptional regulator	A8ATX6	Listeria_phage	7.6e-40	100.0
WP_015987417.1\|2070808_2071117_+	helix-turn-helix transcriptional regulator	A8ATX5	Listeria_phage	9.3e-48	100.0
WP_003731218.1\|2071148_2071640_+	hypothetical protein	A8ATX4	Listeria_phage	2.6e-92	100.0
WP_003731217.1\|2071666_2072176_+	hypothetical protein	A8ATX3	Listeria_phage	2.6e-87	100.0
WP_003731216.1\|2072239_2073370_+\|integrase	site-specific integrase	A8ATX2	Listeria_phage	9.8e-212	100.0
WP_009927822.1\|2073645_2075082_-	chitin-binding protein/carbohydrate-binding protein	A0A0K1Y848	Apis_mellifera_filamentous_virus	3.6e-25	37.8
2073376:2073395	attR	NA	NA	NA	NA
WP_003722600.1\|2075238_2075835_+	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	A0A223W000	Agrobacterium_phage	6.6e-58	57.4

DBSCAN-SWA_6

2079753 : 2087595

Streptococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003725407.1\|2079753_2080725_-	DNA-binding protein WhiA	Q7AWZ3	Streptococcus_phage	5.2e-52	39.4
WP_003731212.1\|2080732_2081701_-	YvcK family protein	A1IMD5	Streptococcus_phage	1.8e-68	43.6
WP_003722606.1\|2081702_2082578_-	RNase adapter RapZ	A0A0R8VB27	Thermobifida_phage	1.9e-08	29.7
WP_003725409.1\|2082685_2084416_-	phospho-sugar mutase	A0A1X9I671	Streptococcus_phage	9.5e-174	53.1
WP_009918600.1\|2084457_2085519_-	galactose mutarotase	NA	NA	NA	NA
WP_009918601.1\|2085535_2086519_-	UDP-glucose 4-epimerase GalE	A0A2K9L5H6	Tupanvirus	3.1e-52	38.7
WP_003722610.1\|2086635_2087595_-	thioredoxin-disulfide reductase	G3MA85	Bacillus_virus	2.0e-88	53.7

DBSCAN-SWA_7

2604324 : 2610851

Listeria_phage(33.33%)

tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003728215.1\|2604324_2604777_-	ImmA/IrrE family metallo-endopeptidase	A0A059T7S0	Listeria_phage	4.0e-31	47.9
WP_003721740.1\|2604782_2605118_-	helix-turn-helix transcriptional regulator	A0A2H4JAR9	uncultured_Caudovirales_phage	4.0e-20	52.5
WP_009927883.1\|2605334_2605763_+	hypothetical protein	NA	NA	NA	NA
WP_003731177.1\|2605774_2606191_+	hypothetical protein	A8ASQ1	Listeria_phage	6.5e-20	37.9
WP_003728212.1\|2606470_2606860_+	DUF5072 domain-containing protein	NA	NA	NA	NA
WP_003721744.1\|2606872_2607385_+\|tail	phage major tail protein, TP901-1 family	A0A097PBF4	Streptococcus_pyogenes_phage	1.2e-47	62.7
WP_003721745.1\|2607432_2607735_+	hypothetical protein	NA	NA	NA	NA
WP_003740367.1\|2607776_2608181_+	hypothetical protein	NA	NA	NA	NA
WP_074046956.1\|2608167_2610036_+	hypothetical protein	A0A097PAU2	Streptococcus_pyogenes_phage	4.5e-20	45.8
WP_003734720.1\|2610032_2610851_+\|tail	phage tail family protein	A0A060AFE1	Staphylococcus_phage	7.2e-39	35.0

Anti-CRISPR protein detection

Acr_ID: NZ_CP016213.1|WP_003731276.1|747216_747468_-|hypothetical-protein

Click the colored protein region to show detailed information

Acr_ID: NZ_CP016213.1|WP_003731276.1|2036135_2036387_+|hypothetical-protein

Click the colored protein region to show detailed information

Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_CP016213.1|WP_003731276.1|747216_747468_-|hypothetical-protein

747216_747468_-

83 aa aa

AcrIIA12

hit_Aca_id	identity	query_coverage	hit_coverage
anti_CRISPR3641\|WP_003731276.1\|AcrIIA12\|II-A\|Verified\|Listeria-monocytogenes	1.0	1	1.0

679179-780862

NZ_CP016213.1|WP_003731276.1|2036135_2036387_+|hypothetical-protein

2036135_2036387_+

83 aa aa

AcrIIA12

hit_Aca_id	identity	query_coverage	hit_coverage
anti_CRISPR3641\|WP_003731276.1\|AcrIIA12\|II-A\|Verified\|Listeria-monocytogenes	1.0	1	1.0

2033384-2075835

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP016213

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information