CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP019615	Listeria monocytogenes strain 10-092876-0168 chromosome, complete genome	3 crisprs	cas1,cas2,csn2,csa3,WYL,DinG,cas3,DEDDh,casR	2	29	7	6

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP019615_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019615_1

272389-274999

TypeII

II-A,II-B

Consensus_repeat	Method
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	CRISPRCasFinder
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	CRT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	PILER-CR

39 spacers

csn2,cas2,cas1,cas9

The CRISPR arrays of NZ_CP019615_1

>merge|NZ_CP019615|1|272389-274999|CRISPRCasFinder,CRT,PILER-CR
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACGGCGATTCTGTTGAAACTGCAACGAAACTTGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACCCACGTCAGACCAAGAACTTAAAACTATGCGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACCTAAATTCATGTTGCGGGATGTTGTGGATGGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACGAACTTCTTCACCATCCTTCATTTCTGTTTGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACTCAGACTTCTATATCCACAATAAAAGCCCTGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACGCGAGTCAATTCATCAAACCCAATCAGAAAGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACGTGTACACGATAGTCCAAGTCGGTATTTCCGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACCTCACGTTGTCAAGGTCAAATTTTAGATATGGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACGAGGTTCGTGGGGGTAATCCCGGCTTGCGAGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACAGAGGCAACGAGACTACAGACGCACTTAGAGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACTTTGGTCGAATTCTTCCGCATCTTTAAACTGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACTTAATGAAGAACTAGAAACAATTGAAAACAGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACGCACGTATGATCGTCTTCTTTGATGACCTCGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACTACTCGTATAAAAATCAAGAGAGACGTATTGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACCTTCCGCGTTACATGTTTGACATCAAGTAAGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACGGTTGTGCCGTCACCCGTTGGTGGTAGGCTGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACTTTTCTTTTTCACGATGCGATCGAACGTTTGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACAGTGCAATATTTAGCGTACACATCTTTTACGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACTTGGTCAATAGATGACTGTATTTCTTGCTCGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACTGAAACACACAACATTTCAGAATGGCTTAGGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACACTTACTGAACAACATTGATTACCACAGTTGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACTAATAAACAAGAAATATTACTTCATGAATCGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACCACTATCCACTACAGTGATTTGTATTGTGCGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACGTAATCCCAATTAACCCCGCAGAGGGTGTAGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACTGTCATGGCGAAAGGTAAAACGGTCGATTGGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACAGTGTTGGAGACTGCAAGGATTTCCGGATTGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACAACCTGCAGGTGCTGTGTTCACGTCAGCAAGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACTTGATGAGAATCTATACAGGTACTTAACCGGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACTGTTGTCAAAGATGGTAATAAATGGGTGACGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACCATCGAATTGATACTTTTCGAGTGAAGCAAGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACGTGGGAAACGTTAAATATTATAAAACAGATGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACGCATCGTACCCCAGTTCATGAAGCGCGGTAGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACACAAAACTCTCTAATTCAATTGCTCCATCAGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACTTTATAAAGAATACTTGCGGGGCATAAATGGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACGTCTAAACTTGGAATATAACTTAGGTCTTGGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACACTGATGAAAGTATTTCTCCAATGACAAGTGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACTTAAATACGATGGAATTAATCTATCGATGCGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACTCAAAGAGTTTATACCTGTTTTGATTGAGTGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACTAATATTCTTCCCCCCCATCGCTAACAGGGGTTTTAGAGCTATATTATTCTGAATATCAACACACA

>NZ_CP019615|1|1|272389-274999|CRISPRCasFinder
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	GGCGATTCTGTTGAAACTGCAACGAAACTT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	CCACGTCAGACCAAGAACTTAAAACTATGC
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	CTAAATTCATGTTGCGGGATGTTGTGGATG
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	GAACTTCTTCACCATCCTTCATTTCTGTTT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TCAGACTTCTATATCCACAATAAAAGCCCT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	GCGAGTCAATTCATCAAACCCAATCAGAAA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	GTGTACACGATAGTCCAAGTCGGTATTTCC
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	CTCACGTTGTCAAGGTCAAATTTTAGATATG
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	GAGGTTCGTGGGGGTAATCCCGGCTTGCGA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	AGAGGCAACGAGACTACAGACGCACTTAGA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TTTGGTCGAATTCTTCCGCATCTTTAAACT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TTAATGAAGAACTAGAAACAATTGAAAACA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	GCACGTATGATCGTCTTCTTTGATGACCTC
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TACTCGTATAAAAATCAAGAGAGACGTATT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	CTTCCGCGTTACATGTTTGACATCAAGTAA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	GGTTGTGCCGTCACCCGTTGGTGGTAGGCT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TTTTCTTTTTCACGATGCGATCGAACGTTT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	AGTGCAATATTTAGCGTACACATCTTTTAC
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TTGGTCAATAGATGACTGTATTTCTTGCTC
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TGAAACACACAACATTTCAGAATGGCTTAG
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	ACTTACTGAACAACATTGATTACCACAGTT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TAATAAACAAGAAATATTACTTCATGAATC
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	CACTATCCACTACAGTGATTTGTATTGTGC
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	GTAATCCCAATTAACCCCGCAGAGGGTGTA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TGTCATGGCGAAAGGTAAAACGGTCGATTG
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	AGTGTTGGAGACTGCAAGGATTTCCGGATT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	AACCTGCAGGTGCTGTGTTCACGTCAGCAA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TTGATGAGAATCTATACAGGTACTTAACCG
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TGTTGTCAAAGATGGTAATAAATGGGTGAC
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	CATCGAATTGATACTTTTCGAGTGAAGCAA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	GTGGGAAACGTTAAATATTATAAAACAGAT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	GCATCGTACCCCAGTTCATGAAGCGCGGTA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	ACAAAACTCTCTAATTCAATTGCTCCATCA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TTTATAAAGAATACTTGCGGGGCATAAATG
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	GTCTAAACTTGGAATATAACTTAGGTCTTG
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	ACTGATGAAAGTATTTCTCCAATGACAAGT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TTAAATACGATGGAATTAATCTATCGATGC
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TCAAAGAGTTTATACCTGTTTTGATTGAGT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TAATATTCTTCCCCCCCATCGCTAACAGGG
GTTTTAGAGCTATATTATTCTGAATATCAACACACA

>NZ_CP019615|1|1|272389-274999|CRT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	GGCGATTCTGTTGAAACTGCAACGAAACTT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	CCACGTCAGACCAAGAACTTAAAACTATGC
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	CTAAATTCATGTTGCGGGATGTTGTGGATG
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	GAACTTCTTCACCATCCTTCATTTCTGTTT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TCAGACTTCTATATCCACAATAAAAGCCCT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	GCGAGTCAATTCATCAAACCCAATCAGAAA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	GTGTACACGATAGTCCAAGTCGGTATTTCC
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	CTCACGTTGTCAAGGTCAAATTTTAGATATG
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	GAGGTTCGTGGGGGTAATCCCGGCTTGCGA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	AGAGGCAACGAGACTACAGACGCACTTAGA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TTTGGTCGAATTCTTCCGCATCTTTAAACT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TTAATGAAGAACTAGAAACAATTGAAAACA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	GCACGTATGATCGTCTTCTTTGATGACCTC
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TACTCGTATAAAAATCAAGAGAGACGTATT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	CTTCCGCGTTACATGTTTGACATCAAGTAA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	GGTTGTGCCGTCACCCGTTGGTGGTAGGCT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TTTTCTTTTTCACGATGCGATCGAACGTTT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	AGTGCAATATTTAGCGTACACATCTTTTAC
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TTGGTCAATAGATGACTGTATTTCTTGCTC
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TGAAACACACAACATTTCAGAATGGCTTAG
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	ACTTACTGAACAACATTGATTACCACAGTT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TAATAAACAAGAAATATTACTTCATGAATC
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	CACTATCCACTACAGTGATTTGTATTGTGC
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	GTAATCCCAATTAACCCCGCAGAGGGTGTA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TGTCATGGCGAAAGGTAAAACGGTCGATTG
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	AGTGTTGGAGACTGCAAGGATTTCCGGATT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	AACCTGCAGGTGCTGTGTTCACGTCAGCAA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TTGATGAGAATCTATACAGGTACTTAACCG
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TGTTGTCAAAGATGGTAATAAATGGGTGAC
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	CATCGAATTGATACTTTTCGAGTGAAGCAA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	GTGGGAAACGTTAAATATTATAAAACAGAT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	GCATCGTACCCCAGTTCATGAAGCGCGGTA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	ACAAAACTCTCTAATTCAATTGCTCCATCA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TTTATAAAGAATACTTGCGGGGCATAAATG
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	GTCTAAACTTGGAATATAACTTAGGTCTTG
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	ACTGATGAAAGTATTTCTCCAATGACAAGT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TTAAATACGATGGAATTAATCTATCGATGC
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TCAAAGAGTTTATACCTGTTTTGATTGAGT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TAATATTCTTCCCCCCCATCGCTAACAGGG
GTTTTAGAGCTATATTATTCTGAATATCAACACACA

>NZ_CP019615|1|1|273314-274933|PILER-CR
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	CTTCCGCGTTACATGTTTGACATCAAGTAA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	GGTTGTGCCGTCACCCGTTGGTGGTAGGCT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TTTTCTTTTTCACGATGCGATCGAACGTTT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	AGTGCAATATTTAGCGTACACATCTTTTAC
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TTGGTCAATAGATGACTGTATTTCTTGCTC
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TGAAACACACAACATTTCAGAATGGCTTAG
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	ACTTACTGAACAACATTGATTACCACAGTT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TAATAAACAAGAAATATTACTTCATGAATC
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	CACTATCCACTACAGTGATTTGTATTGTGC
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	GTAATCCCAATTAACCCCGCAGAGGGTGTA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TGTCATGGCGAAAGGTAAAACGGTCGATTG
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	AGTGTTGGAGACTGCAAGGATTTCCGGATT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	AACCTGCAGGTGCTGTGTTCACGTCAGCAA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TTGATGAGAATCTATACAGGTACTTAACCG
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TGTTGTCAAAGATGGTAATAAATGGGTGAC
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	CATCGAATTGATACTTTTCGAGTGAAGCAA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	GTGGGAAACGTTAAATATTATAAAACAGAT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	GCATCGTACCCCAGTTCATGAAGCGCGGTA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	ACAAAACTCTCTAATTCAATTGCTCCATCA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TTTATAAAGAATACTTGCGGGGCATAAATG
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	GTCTAAACTTGGAATATAACTTAGGTCTTG
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	ACTGATGAAAGTATTTCTCCAATGACAAGT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TTAAATACGATGGAATTAATCTATCGATGC
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TCAAAGAGTTTATACCTGTTTTGATTGAGT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019615.1\|WP_003726061.1\|276007_276430_+\|MerR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|133384
NZ_CP019615.1\|WP_003724014.1\|288948_289371_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_CP019615.1\|WP_003726076.1\|263393_264140_+\|tRNA-pseudouridine(38-40)-synthase-TruA	unknown	unknown	gnl\|CDD\|234577
NZ_CP019615.1\|WP_003727706.1\|270403_271270_+\|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|187851
NZ_CP019615.1\|WP_003727703.1\|264334_264772_+\|50S-ribosomal-protein-L13	unknown	unknown	gnl\|CDD\|181703
NZ_CP019615.1\|WP_003728530.1\|262590_263388_+\|energy-coupling-factor-transporter-transmembrane-protein-EcfT	unknown	unknown	gnl\|CDD\|223692
NZ_CP019615.1\|WP_003727711.1\|277343_278870_-\|GW-domain-containing-glycosaminoglycan-binding-protein	unknown	unknown	gnl\|CDD\|224619
NZ_CP019615.1\|WP_003726075.1\|264793_265186_+\|30S-ribosomal-protein-S9	unknown	unknown	gnl\|CDD\|178888
NZ_CP019615.1\|WP_009917684.1\|261721_262588_+\|energy-coupling-factor-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|237454
NZ_CP019615.1\|WP_003727710.1\|276451_277303_+\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381359
NZ_CP019615.1\|WP_003727707.1\|271597_272260_+\|type-II-A-CRISPR-associated-protein-Csn2	csn2	cd09758_csn2_CAS-II-A	gnl\|CDD\|213408
NZ_CP019615.1\|WP_003727712.1\|279138_280167_+\|P-loop-NTPase	unknown	unknown	gnl\|CDD\|378455
NZ_CP019615.1\|WP_003724015.1\|288507_288933_-\|ImmA/IrrE-family-metallo-endopeptidase	unknown	unknown	gnl\|CDD\|225412
NZ_CP019615.1\|WP_003727704.1\|265409_265889_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019615.1\|WP_003724016.1\|287785_288493_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019615.1\|WP_003727705.1\|266398_270403_+\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	COG3513_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226044
NZ_CP019615.1\|WP_003723648.1\|271266_271608_+\|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226043
NZ_CP019615.1\|WP_003724018.1\|285895_287059_-\|site-specific-integrase	unknown	unknown	gnl\|CDD\|271189
NZ_CP019615.1\|WP_003724017.1\|287121_287727_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019615.1\|WP_003727709.1\|275523_275886_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP019615.1\|WP_003726061.1\|276007_276430_+\|MerR-family-transcriptional-regulator	gnl\|CDD\|133384	cd01109, HTH_YyaN, Helix-Turn-Helix DNA binding domain of the MerR-like transcription regulators YyaN and YraB. Putative helix-turn-helix (HTH) MerR-like transcription regulators of Bacillus subtilis, YyaN and YraB, and related proteins; N-terminal domain. Based on sequence similarity, these proteins are predicted to function as transcription regulators that mediate responses to stress in eubacteria. They belong to the MerR superfamily of transcription regulators that promote transcription of various stress regulons by reconfiguring the operator sequence located between the -35 and -10 promoter elements. A typical MerR regulator is comprised of distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their N-terminal domains are homologous and contain a DNA-binding winged HTH motif, while the C-terminal domains are often dissimilar and bind specific coactivator molecules such as metal ions, drugs, and organic substrates.	4.55324e-42
NZ_CP019615.1\|WP_003724014.1\|288948_289371_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	1.10783e-14
NZ_CP019615.1\|WP_003726076.1\|263393_264140_+\|tRNA-pseudouridine(38-40)-synthase-TruA	gnl\|CDD\|234577	PRK00021, truA, tRNA pseudouridine(38-40) synthase TruA.	3.28185e-128
NZ_CP019615.1\|WP_003727706.1\|270403_271270_+\|type-II-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|187851	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer intergration. Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	1.3879e-135
NZ_CP019615.1\|WP_003727703.1\|264334_264772_+\|50S-ribosomal-protein-L13	gnl\|CDD\|181703	PRK09216, rplM, 50S ribosomal protein L13; Reviewed.	2.08607e-102
NZ_CP019615.1\|WP_003728530.1\|262590_263388_+\|energy-coupling-factor-transporter-transmembrane-protein-EcfT	gnl\|CDD\|223692	COG0619, CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters [Inorganic ion transport and metabolism].	6.0076e-53
NZ_CP019615.1\|WP_003727711.1\|277343_278870_-\|GW-domain-containing-glycosaminoglycan-binding-protein	gnl\|CDD\|224619	COG1705, FlgJ, Muramidase (flagellum-specific) [Cell motility and secretion / Intracellular trafficking and secretion].	1.89046e-69
NZ_CP019615.1\|WP_003726075.1\|264793_265186_+\|30S-ribosomal-protein-S9	gnl\|CDD\|178888	PRK00132, rpsI, 30S ribosomal protein S9; Reviewed.	3.78102e-86
NZ_CP019615.1\|WP_009917684.1\|261721_262588_+\|energy-coupling-factor-ABC-transporter-ATP-binding-protein	gnl\|CDD\|237454	PRK13634, cbiO, cobalt transporter ATP-binding subunit; Provisional.	0
NZ_CP019615.1\|WP_003727710.1\|276451_277303_+\|aldo/keto-reductase	gnl\|CDD\|381359	cd19133, AKR_AKR5F1, the AKR5F family of aldo-keto reductase (AKR). Klebsiella sp. 2,5-diketo-D-gluconic acid reductase (2,5-DKG reductase) is a founding member of aldo-keto reductase family 5 member F1 (AKR5F1). It catalyzes the reduction of 2,5-diketo-D-gluconic acid (25DKG) to 2-keto-L-gulonic acid (2KLG).	2.69962e-170
NZ_CP019615.1\|WP_003727707.1\|271597_272260_+\|type-II-A-CRISPR-associated-protein-Csn2	gnl\|CDD\|213408	cd09758, Csn2, CRISPR/Cas system-associated protein Csn2. Csn2 is a Nmeni subtype-specific Cas protein, which may function in the adaptation process which mediates the incorporation of foreign nucleic acids into the microbial host genome. Csn 2 may interact directly with double-stranded DNA. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA. Csn2 has been predicted to be a functional analog of Cas4 based on anti-correlated phyletic patterns; also known as SPy1049 family.	1.92136e-112
NZ_CP019615.1\|WP_003727712.1\|279138_280167_+\|P-loop-NTPase	gnl\|CDD\|378455	pfam10609, ParA, NUBPL iron-transfer P-loop NTPase. This family contains ATPases involved in plasmid partitioning. It also contains the cytosolic Fe-S cluster assembling factor NBP35 which is required for biogenesis and export of both ribosomal subunits.	1.70792e-114
NZ_CP019615.1\|WP_003724015.1\|288507_288933_-\|ImmA/IrrE-family-metallo-endopeptidase	gnl\|CDD\|225412	COG2856, COG2856, Predicted Zn peptidase [Amino acid transport and metabolism].	6.38766e-17
NZ_CP019615.1\|WP_003727705.1\|266398_270403_+\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	gnl\|CDD\|226044	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms].	0
NZ_CP019615.1\|WP_003723648.1\|271266_271608_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	2.60762e-45
NZ_CP019615.1\|WP_003724018.1\|285895_287059_-\|site-specific-integrase	gnl\|CDD\|271189	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons. This family of tyrosine based site-specific integrases is has origins in bacterial phages and conjugate transposons. One member is the integrase from Bacillus subtilis conjugative transposon ICEBs1. ICEBs1 can be excised and transfered to various recipients in response to DNA damage or high concentrations of potential mating partners. The family belongs to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The catalytic domain contains six conserved active site residues. Their overall reaction mechanism involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA.	2.83105e-40

>NZ_CP019615.1|WP_003727707.1|271597_272260_+|type-II-A-CRISPR-associated-protein-Csn2
MNFNFKLLDDPIQIEDSTIFVIEDVRVFANVTKFFYQYEETEELTIFDAKHQPLKSSELMLITDVLGHDINSAATLKLIYVDLEQQLNEKPEVKSMIDKLTATISELIGYELLEHELDLEEDEITVIELFKALGIKIETKSDTVFEKLIEIVQVYKYLSKKKLLVLINVCSYLTEEELLELRRYITLYQVKVLFIEPRKIKGSPQVTLDSDYFLHVENSV
>NZ_CP019615.1|WP_003723648.1|271266_271608_+|CRISPR-associated-endonuclease-Cas2
MSYRYMRMLLMFDMPTDTAKERKAYRQFRRFILSEGFIMHQYSVYSKILLNGTASKAMLARLKQQNPKKGLITLLTVTEKQFARMVYLSGEQNKSIGNSDARLVFLGDDADEF
>NZ_CP019615.1|WP_003727706.1|270403_271270_+|type-II-CRISPR-associated-endonuclease-Cas1
MGWRTVVVNSHSKLSYKNQHLVFKSAYQQEMIHLSEIDVLILETTDITLTTMLINCLVAENILILFCDDKRLPIGKVLPFYGRHDSSLQLTKQLEWDAELKAAVWTEIISQKILNQSTYLSMLNYDEKASSLINLHEALAVFDPTNREGHAARIYFNQLFGNDFTREQENDINSGLNYGYTLLLSIFARELVKSGCMTQFGLKHANQFNDFNLASDLMEPFRPLVDQIVYEKRNEDFQVIKRSLFELFTKQFDYNDQHMFLTNIASDYTKKIVKVLNEEREGVPEFRI
>NZ_CP019615.1|WP_003727705.1|266398_270403_+|type-II-CRISPR-RNA-guided-endonuclease-Cas9
MKNPYTIGLDIGTNSVGWAVLTDQYDLVKRKMKVAGNSDKKQIKKNFWGVRLFDDGQTAVDRRMNRTARRRIERRRNRISYLQEIFAVEMANIDANFFCRLNDSFYVDSEKRNSRHPFFATIEEEVAYHKNYRTIYHLREELVNSSEKADLRLVYLALAHIIKYRGNFLIEGALDTKNTSVDEVYKQFIQTYNQVFMSNIEEGALAKVEENTEVASILAGKFTRREKFERILRLYPGEKSTGMFAQFISLIVGNKGNFQKVFNLVEKTDIECAKDSYEEDLEALLAIIGDEYAELFVAAKNTYNAVVLSSIITVTATETNAKLSASMIERFDAHEKELGELKAFIKLHLPKQYQEIFNNAEIDGYAGYIDGKTKQVDFYKYLKTTLENVEGADYFITKIEEENFLRKQRTFDNGVIPHQLHLEELEAILHQQAKYYPFLREGYDKIKSLVTFRIPYFVGPLANGQSEFAWLTRKDDGEIRPWNIEEKVDFGKSAVDFIEKMTNKDTYLPKENVLPKHSLCYQKYMVYNELTKIRYIDDQGKTNYFSGREKQQIFNDLFKQKRKVKKKDLELFLRNINHIESPTIEGLEDSFNASYATYHDLLKVGLKQEILDNPLNTEILEDIVKILTVFEDKRMIKEQLEQFSDVLDGVVLKKLERRHYTGWGRLSAKLLVGIRDKQSHLTILDYLMNDDGLNRNLMQLINDSNLSFKSIIEKEQVSTTDKDLQSIVADLAGSPAIKKGILQSLKIVDELVSIMGYPPQTIVVEMARENQTTGKGKNNSKPRYKSLEKAIKDFGSQILKEHPTDNQELKNNRLYLYYLQNGKDIYTGQELDIHNLSNYDIDHIVPQSFITDNSIDNLVLTSSAGNREKGGDVPPLEIVRKRKVFWEKLYQGNLMSKRKFDYLTKAERGGLTEADKARFIHRQLVETRQITKNVANILHQRFNKETDNHGNTMEQVRIVTLKSALVSQFRKQFQLYKVREVNDYHHAHDAYLNGVVANTLLKVYPQLEPEFVYGEYHQFDWFKANKATAKKQFYTNIMLFFAQKERIIDENGEILWDKKYLETIKKVLDYRQINIVKKTEIQKGEFSKATIKPKGNSSKLIPRKENWDPMKYGGLDSPNMAYAVIIEHAKGKKKIVIEKKLIQINIMERKMFEKDEEAFLEEKGYHQPKVLTKLPKYTLYECEKGRRRMLSSANEAQKGNQLVLSNHLVSLLYHAKNCEASDGKSLKYIEAHRETFSELLAQVSEFATKYTLADANLSKINNLFEQNKEGDIKAIAQSFVDLMAFNAMGAPASFKFFEATIDRKRYTNLKELLSSTIIYQSITGLYESRKRLDD
>NZ_CP019615.1|WP_003727704.1|265409_265889_+|hypothetical-protein
MKGLIINKMHSGYFTNMSEVFNLLPEEELNCMWLVSSYECNIYPFEQIPFEKEYVWMKGTELKEILNQEEVMFIWGNFTSYPSNTKLKDILKYPIPFADGNSDLWKKDVHLSNPLSNTELISWDGSIFLTLSKNTTLIEGLKDNYPDSEDLSTYNSDID
>NZ_CP019615.1|WP_003726075.1|264793_265186_+|30S-ribosomal-protein-S9
MAQVQYYGTGRRKSSVARVRLVPGDGKIVINNRDWEDYIPFAALREVIKQPLVATETLGNYDVLVNVHGGGYTGQAGAIRHGVARALLQVAPEYRPALKSAGLLTRDPRMKERKKYGLKGARRAPQFSKR
>NZ_CP019615.1|WP_003727703.1|264334_264772_+|50S-ribosomal-protein-L13
MRTTYMAKPGEVERKWYVIDATGVSLGRLSSEVASILRGKNKPQFTPHIDTGDFVIIINAGKIGLTGKKATDKIYYRHSQYPGGLKSRTAGEMRTNNPEKLLELSIKGMLPKNSLGRQLFKKLHVYGGSEHEHAAQQPEVYELRG
>NZ_CP019615.1|WP_003726076.1|263393_264140_+|tRNA-pseudouridine(38-40)-synthase-TruA
MTRYKAIISYDGSGFYGYQVQPNTRTVQAEIEKALTKMHKGKTVRITASGRTDTGVHAKGQVIHFDSELDITAEKFQKALQVMTPFDISFLTVEEVPDDFHARFGTVGKEYRYVVKRTKIFDPFSRNFALHYPYELDISKMKLASKRLIGEHDFTSFCSARTERDSKVRTLYSIDFYEEDDETLVIAFQGNGFLYNMVRILTGTLLDAGQGRISPDDISEALLARDRQKLISKTAPPQGLYLWRVDYE
>NZ_CP019615.1|WP_003728530.1|262590_263388_+|energy-coupling-factor-transporter-transmembrane-protein-EcfT
MMDKMILGRYIPGNSWLHRIDPRAKITAVMAFIAIVFLANNWLTYALMFAYVLYLVLTSKVPFLFFIKGLQPIFWLILITLLLQVFFTKGGTVLVDLGLLQITTLGLTNGAMMFCRFVLIIFMTTLLTLTTSPIELTDGLEKILAPFRLVHLPVHELALMLSISLRFIPTLMDETEKILKAQKARGVEFTSGKWSDRIKAIIPLLVPLFISAFKRAEDLAIAMEARGYRGGKGRTRFRILRWRFADTFLLISLAVLSGLLFWLRS
>NZ_CP019615.1|WP_009917684.1|261721_262588_+|energy-coupling-factor-ABC-transporter-ATP-binding-protein
MEIKLEQLGYCYQKNSPFEKRALLDVNVSFDSGSYSAIIGHTGSGKSTLLQHLNALLMPTEGKITVGDREIIAGVKQKKLRDLRKKVGIVFQFPEAQLFEETVEKDICFGPMNFGVSEEDAKLRAKKVIYEVGLTEEILSRSPFELSGGQMRRVAIAGVLAMDPEVLVLDEPTAGLDPHGREEIMEMFYNLHKEKGLTTVLVTHSMEDAARYAEKIVLMKAGTVLQIGTPREVFAKPAELVDLGLSVPDVVRFQGLFERKFDVKLTKTCLTIDELTTEMAPYLAKGGA
>NZ_CP019615.1|WP_003727709.1|275523_275886_+|hypothetical-protein
MKKTSIIFTFCALLLTACSTTTKETPRQTTEATGTIEQVETESILIKNFKIKNDNNTPELSVRFHISEKYHDETGNKIKRTELNKNDNIKIILTKDFPIQETSPAQIDPKYIQKIILLNK
>NZ_CP019615.1|WP_003726061.1|276007_276430_+|MerR-family-transcriptional-regulator
MNIKQAADMFGLTVDTLRYYERVGVIPPVHRNESGYRDYKTSDLNWVYLVKNLRNAGLSVESLIEFATLAQLRETQNVEAAQKQVLVDQLKELDEKLAEMKKVRELLVYKIDSYDSHIAQFKAGELNADNVEKLWKRDKF
>NZ_CP019615.1|WP_003727710.1|276451_277303_+|aldo/keto-reductase
MKTVKLNNGVEVPILGFGTYQITDAAEAEQAVKDAIKTGYRHIDTAQSYMNEEAVGRGIVASGVDRKELFITTKIWVENVSYKGVMSSFDRSLKRLGLDYIDLLLIHQPFNDVYGAWIAMEELQASGKIRAIGVSNFSPDRVIDLAAFNEVTPQVNQIEVNPFQQQAANLAVLRKEGVTIEAWAPFAEGKNDIFNNPVLTKIGAKYGKSAAQVILRWLVEQDIIVLAKSVKPERMAQNLAIFDFELTEADKGEIASLDQGESQFFSHADPEMVKWMASRKLNV
>NZ_CP019615.1|WP_003727711.1|277343_278870_-|GW-domain-containing-glycosaminoglycan-binding-protein
MDRKFIKPGIILLIVAFLVVSINVGAETGGSRTAQVNLTTSQQAFIDEILPAAQDGYRDGKLLTSVTLAQAILESNWGESGLSQNSNNLFGIKGTYKGKSVSMGTMEASGSTTANFRVYPSWKESIEDHTALITENARYQDAVGETNYRKALQAIKDGGYATDPDYVSKLVAIIERYNLDKYDVIYDKIESNQSLAAIGTVAENKEQEVIWSAPYNTENANKIGTLENYLGRNLEISWEAKTEKGLWYFIRENNKDIGWINSNALKISYHQKEDENVHLTKYVDDLSAHVYRLPSPEKQFDNGTIAKYDRKALEVDKKTTRGGYAWFRISEGEKVIGWVRADKLNDRLYDRITEQTSYDGYALVSKSATDNVWTAPFNTKNAEKLAPLADYDNEKLELVTRAKAGNTLWYQFKVDGKLVGWASEKDLNVFYTPAKEEPVKQVAYVKDPTAKLYNKPVESTSTNPKAVGFYYGKLLAVDKTATILGEDWLHLKDRQNSLGWIKAIDINS
>NZ_CP019615.1|WP_003727712.1|279138_280167_+|P-loop-NTPase
MLNEQQITRLLYRLQDPVLEASLEETEGVLEVQVLKETANIKIALADPAVETDHFVHNIEELLTQFGVNEINIELEYLPAAVIDRIFQARDNILSEASETKFLAIASGKGGVGKSTVSANLAIALAQQGKKVGLLDADIYGFSIPVLLGTTESPRKENGQIIPVETHGIQMISMDFFVEQGEPVIWRGPMLGKMIKMFLEEVRWGKLDYLLIDLPPGTGDVALDIHTLIPKCNELIVTTPHYAAASVASRAGYMAAKNNHKIIGVIENMSYLTLADGQVLKVFGQGGGEKVAADLETQLLIQLPIEQPEPNGNGYVSALFNSSSTSGKAYKTLAEKIIPYLS
>NZ_CP019615.1|WP_003724018.1|285895_287059_-|site-specific-integrase
MASYVNLGNNKYELRVSKGYDARGKQIRKTKNVTVKTVKALKLELSNFEAYVYSSDYTEIKDMRFIDFVEKWRLNYAKRELKGNTIDKYNLFLENWIIPYFERKKISKITTMQLLDYFHEVQKKGVGPSALEGHHRVIRSLFKYATLWGITETDVSLSVKKPTYKVPEKNIYNRREIEVLIDRIKILQKYQQVMIKLALYCGLRRGEVIGLTTKDMNYNKNTINVYRAVIKSASEGIKLDETKNKRKRIVPAPAGLMQEIKELAKEKQKNKDKLGLLWKGTKDLDGKTVVLIFSHDDGTPFTPASVTRMFNRFLEKEENNDLTKISFHDLRHSAASFLLEQGINVKVIQNILGHSDIKVTLNTYAHITEDGYSEAAKTFDNFYKSSK
>NZ_CP019615.1|WP_003724017.1|287121_287727_-|hypothetical-protein
MSKYRHLLKKWWLWVIFLLVIIGIVSLFWYTQVYSSEWGKGLSKEDKEVLEKANKSTNEFNKFAKEANSGIKSFNNDATINPQIVINPFTKMGDNITERSDEFIKDYDEYSISIQNILKDDYNNIKKLRDDVVAQQEEIKSIYSNAHNYNRELSTVESRIVENIYQEMHKEQKESLGLKNHEFKKNAEFSDKAIKLMPGVD
>NZ_CP019615.1|WP_003724016.1|287785_288493_-|hypothetical-protein
MKKWIVLCFILLLSLVLYACGEPELDISDSTGKGYYLNQTGKTSDNAKITLKDENGDSKKIETDNNSFTMLFPRLNSKATYTVLAEKDEKTSETEIVVPKQKKLVSYEDLQGQFNYIFETEDDLSISLPESVTSDAEVTNGFKIMSDGNNVMSLLLTYSSNDKIGITDYNDFTYSIAAIMMSLDSENGLDKVLNALNNSMDDQKDTKVSVNEITYQFSTINTSSTNLTTLEIYPS
>NZ_CP019615.1|WP_003724015.1|288507_288933_-|ImmA/IrrE-family-metallo-endopeptidase
MEMSEFIQQQIQKLVNIHETRNPFLIAKEKDILILKEDLGEVYGYYNKINRIKMIHLNNLFSDERQLFTCAHELCHALIHQDENTPQLSKQTIVSEWKVEKEANYFATQLLIDGSHLEHYIDTTDKIINFYGLPEEMKKYI
>NZ_CP019615.1|WP_003724014.1|288948_289371_-|helix-turn-helix-transcriptional-regulator
MFGDRLRSLRENKNLTQQKVADDLNIKRENLSNYERNKREPDYEMLKKLAEYYGVSRSYILGETDKKQYWELDDKDERSIQKDLQKMIDDLSNSDAFAYSKEDGEMDENTKKLLIMSLENSLRIAKEESKKRFTPKKYRK

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Crispr_ID: NZ_CP019615_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019615_2

2573037-2573621

Orphan

Consensus_repeat	Method
CATATNAGTTACTGAACTNGTATCAAAATTACTTACATC	CRT

7 spacers

The CRISPR arrays of NZ_CP019615_2

>merge|NZ_CP019615|2|2573037-2573621|CRT
CATGTTAGTCACTGAACTGGTATCAAAGGTACTTAAATCAAGCTTCTCCAGTTTTTCATTATCAGAAAACATGGCAGCCATATTAGTTACTGAACTCGTATCAAAATTACTTACATCTAACGCTTCAAGACTAGTACAACCAGCAAACATGGCACGCATATCAGTTACTAAGCTCGTATTAAAATTACTTACATCCAACTTCTCAAGGGCGCTACAATTTCTAAACATTTGAACCATTGCAGTAGCGGAACTGGTATCGAAATTACTTACATCTAGTTTCTTCAGTTTTTCACAGCCATTAAACACTCTATACATATCAGTTACTGAACTCGTATCAAAATTACTTACATCCAGCTCTTCAAGACTAGTACAATCTTCAAACATGGCATACATATTAGTTACTGAACCGGTATCAAGGTTGCTTACATCCAGCACCTCAAGGTTTCTATTATCATAAAACATGTAAGACATATTAGTTACTGAACTCGTATCAAAATGACTTACATCCAGTTCCTCAAGTGCCCTACAGCTGTTAAACATATCCCACATAGTAGTTACCGCACTAGTATCAAGACCACTCAAATC

>NZ_CP019615|2|2|2573037-2573621|CRT
CATGTTAGTCACTGAACTGGTATCAAAGGTACTTAAATC	AAGCTTCTCCAGTTTTTCATTATCAGAAAACATGGCAGC
CATATTAGTTACTGAACTCGTATCAAAATTACTTACATC	TAACGCTTCAAGACTAGTACAACCAGCAAACATGGCACG
CATATCAGTTACTAAGCTCGTATTAAAATTACTTACATC	CAACTTCTCAAGGGCGCTACAATTTCTAAACATTTGAAC
CATTGCAGTAGCGGAACTGGTATCGAAATTACTTACATC	TAGTTTCTTCAGTTTTTCACAGCCATTAAACACTCTATA
CATATCAGTTACTGAACTCGTATCAAAATTACTTACATC	CAGCTCTTCAAGACTAGTACAATCTTCAAACATGGCATA
CATATTAGTTACTGAACCGGTATCAAGGTTGCTTACATC	CAGCACCTCAAGGTTTCTATTATCATAAAACATGTAAGA
CATATTAGTTACTGAACTCGTATCAAAATGACTTACATC	CAGTTCCTCAAGTGCCCTACAGCTGTTAAACATATCCCA
CATAGTAGTTACCGCACTAGTATCAAGACCACTCAAATC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019615.1\|WP_003725186.1\|2586842_2589002_+\|transglutaminase	unknown	unknown	gnl\|CDD\|376628
NZ_CP019615.1\|WP_012681107.1\|2570313_2572074_-\|BspA-family-leucine-rich-repeat-surface-protein	unknown	unknown	gnl\|CDD\|308794
NZ_CP019615.1\|WP_003727314.1\|2565576_2565936_-\|DUF3139-domain-containing-protein	unknown	unknown	gnl\|CDD\|371476
NZ_CP019615.1\|WP_003728097.1\|2589894_2590560_+\|DUF1275-domain-containing-protein	unknown	unknown	gnl\|CDD\|226146
NZ_CP019615.1\|WP_003733326.1\|2569269_2569755_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019615.1\|WP_009918927.1\|2568594_2568861_-\|transposase	unknown	unknown	unknown
NZ_CP019615.1\|WP_009918902.1\|2567552_2568515_+\|HD-domain-containing-protein	unknown	unknown	gnl\|CDD\|224004
NZ_CP019615.1\|WP_003728095.1\|2585697_2586846_+\|DUF58-domain-containing-protein	unknown	unknown	gnl\|CDD\|224635
NZ_CP019615.1\|WP_003721242.1\|2584745_2585693_+\|MoxR-family-ATPase	unknown	unknown	gnl\|CDD\|223786
NZ_CP019615.1\|WP_003728089.1\|2574413_2576495_-\|BspA-family-leucine-rich-repeat-surface-protein	unknown	unknown	gnl\|CDD\|308794
NZ_CP019615.1\|WP_003733207.1\|2564690_2565251_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|379534
NZ_CP019615.1\|WP_009918040.1\|2582994_2584590_-\|PucR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225306
NZ_CP019615.1\|WP_012681110.1\|2565963_2566791_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|368573
NZ_CP019615.1\|WP_003728093.1\|2580475_2581576_-\|DUF917-domain-containing-protein	unknown	unknown	gnl\|CDD\|226065
NZ_CP019615.1\|WP_003725189.1\|2581576_2582860_-\|cytosine-permease	unknown	unknown	gnl\|CDD\|271377
NZ_CP019615.1\|WP_003728092.1\|2578932_2580483_-\|hydantoinase/oxoprolinase-family-protein	unknown	unknown	gnl\|CDD\|223223
NZ_CP019615.1\|WP_003728455.1\|2569774_2570248_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019615.1\|WP_009918925.1\|2568936_2569242_-\|LPXTG-cell-wall-anchor-domain-containing-protein	unknown	unknown	gnl\|CDD\|273478
NZ_CP019615.1\|WP_003727311.1\|2562880_2564581_-\|oleate-hydratase	unknown	unknown	gnl\|CDD\|227060
NZ_CP019615.1\|WP_003728096.1\|2589118_2589874_+\|DUF4866-domain-containing-protein	unknown	unknown	gnl\|CDD\|379782

Protein	Function_ID	Function_description	E-value
NZ_CP019615.1\|WP_003725186.1\|2586842_2589002_+\|transglutaminase	gnl\|CDD\|376628	pfam01841, Transglut_core, Transglutaminase-like superfamily. This family includes animal transglutaminases and other bacterial proteins of unknown function. Sequence conservation in this superfamily primarily involves three motifs that centre around conserved cysteine, histidine, and aspartate residues that form the catalytic triad in the structurally characterized transglutaminase, the human blood clotting factor XIIIa'. On the basis of the experimentally demonstrated activity of the Methanobacterium phage pseudomurein endoisopeptidase, it is proposed that many, if not all, microbial homologs of the transglutaminases are proteases and that the eukaryotic transglutaminases have evolved from an ancestral protease.	4.40206e-28
NZ_CP019615.1\|WP_012681107.1\|2570313_2572074_-\|BspA-family-leucine-rich-repeat-surface-protein	gnl\|CDD\|308794	pfam03382, DUF285, Mycoplasma protein of unknown function, DUF285. This region appears distantly related to leucine rich repeats.	7.96941e-29
NZ_CP019615.1\|WP_003727314.1\|2565576_2565936_-\|DUF3139-domain-containing-protein	gnl\|CDD\|371476	pfam11337, DUF3139, Protein of unknown function (DUF3139). This family of proteins with unknown function appears to be restricted to Firmicutes.	1.02958e-22
NZ_CP019615.1\|WP_003728097.1\|2589894_2590560_+\|DUF1275-domain-containing-protein	gnl\|CDD\|226146	COG3619, COG3619, Predicted membrane protein [Function unknown].	4.12981e-67
NZ_CP019615.1\|WP_003728095.1\|2585697_2586846_+\|DUF58-domain-containing-protein	gnl\|CDD\|224635	COG1721, COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) [General function prediction only].	1.29902e-52
NZ_CP019615.1\|WP_009918902.1\|2567552_2568515_+\|HD-domain-containing-protein	gnl\|CDD\|224004	COG1078, COG1078, HD superfamily phosphohydrolases [General function prediction only].	3.39526e-44
NZ_CP019615.1\|WP_003721242.1\|2584745_2585693_+\|MoxR-family-ATPase	gnl\|CDD\|223786	COG0714, COG0714, MoxR-like ATPases [General function prediction only].	7.47241e-102
NZ_CP019615.1\|WP_003728089.1\|2574413_2576495_-\|BspA-family-leucine-rich-repeat-surface-protein	gnl\|CDD\|308794	pfam03382, DUF285, Mycoplasma protein of unknown function, DUF285. This region appears distantly related to leucine rich repeats.	5.28459e-29
NZ_CP019615.1\|WP_003733207.1\|2564690_2565251_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|379534	pfam14278, TetR_C_8, Transcriptional regulator C-terminal region. This domain is a tetracycline repressor, domain 2, or C-terminus.	2.23521e-25
NZ_CP019615.1\|WP_009918040.1\|2582994_2584590_-\|PucR-family-transcriptional-regulator	gnl\|CDD\|225306	COG2508, COG2508, Regulator of polyketide synthase expression [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism].	8.93438e-60
NZ_CP019615.1\|WP_012681110.1\|2565963_2566791_-\|hypothetical-protein	gnl\|CDD\|368573	pfam05708, Peptidase_C92, Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family. Amidase_YiiX is a family of permuted papain-like amidases. It has amidase specificity for the amide bond between a lipid and an amino acid (or peptide). From the structure, a tetramer, each monomer is made up of a layered alpha-beta fold with a central, 6-stranded, antiparallel beta-sheet that is protected by helices on either side. The catalytic Cys154 in UniProtKB:Q74NK7, Structure 3kw0, is located on the N-terminus of helix alphaF. The two additional helices located above Cys154 contribute to the formation of the active site, where the lysine ligand is bound.	0.00019582
NZ_CP019615.1\|WP_003728093.1\|2580475_2581576_-\|DUF917-domain-containing-protein	gnl\|CDD\|226065	COG3535, COG3535, Uncharacterized conserved protein [Function unknown].	0
NZ_CP019615.1\|WP_003725189.1\|2581576_2582860_-\|cytosine-permease	gnl\|CDD\|271377	cd11484, SLC-NCS1sbd_CobB-like, nucleobase-cation-symport-1 (NCS1) transporter CobB-like; solute-binding domain. This NCS1 subfamily includes Escherichia coli CodB (cytosine permease), and the Saccharomyces cerevisiae transporters: Fcy21p (Purine-cytosine permease), and vitamin B6 transporter Tpn1. NCS1s are essential components of salvage pathways for nucleobases and related metabolites; their known substrates include allantoin, uracil, thiamine, and nicotinamide riboside. NCS1s belong to a superfamily which also contains the solute carrier 5 family sodium/glucose transporters (SLC5s), and solute carrier 6 family neurotransmitter transporters (SLC6s).	2.40318e-96
NZ_CP019615.1\|WP_003728092.1\|2578932_2580483_-\|hydantoinase/oxoprolinase-family-protein	gnl\|CDD\|223223	COG0145, HyuA, N-methylhydantoinase A/acetone carboxylase, beta subunit [Amino acid transport and metabolism / Secondary metabolites biosynthesis, transport, and catabolism].	1.15698e-106
NZ_CP019615.1\|WP_003727311.1\|2562880_2564581_-\|oleate-hydratase	gnl\|CDD\|227060	COG4716, COG4716, Myosin-crossreactive antigen [Function unknown].	0
NZ_CP019615.1\|WP_009918925.1\|2568936_2569242_-\|LPXTG-cell-wall-anchor-domain-containing-protein	gnl\|CDD\|273478	TIGR01167, Zinc_metalloprotease_ZmpB, LPXTG-motif cell wall anchor domain. This model describes the LPXTG motif-containing region found at the C-terminus of many surface proteins of Streptococcus and Streptomyces species. Cleavage between the Thr and Gly by sortase or a related enzyme leads to covalent anchoring at the new C-terminal Thr to the cell wall. Hits that do not lie at the C-terminus or are not found in Gram-positive bacteria are probably false-positive. A common feature of this proteins containing this domain appears to be a high proportion of charged and zwitterionic residues immediatedly upstream of the LPXTG motif. This model differs from other descriptions of the LPXTG region by including a portion of that upstream charged region. [Cell envelope, Other].	3.43885e-05
NZ_CP019615.1\|WP_003728096.1\|2589118_2589874_+\|DUF4866-domain-containing-protein	gnl\|CDD\|379782	pfam16160, DUF4866, Domain of unknown function (DUF4866). This family consists of uncharacterized proteins around 250 residues in length and is mainly found in various human gut Firmicute species and abundant in human gut metagenomic datasets. The function of this family is unknown.	1.04021e-122

>NZ_CP019615.1|WP_012681107.1|2570313_2572074_-|BspA-family-leucine-rich-repeat-surface-protein
MKKFSMRVVLIISVLFIAFGSANVSIAQERDTTNKLPEEELGSLDTSNIIAEEVAQEKPAEVEQLEEIPTTDELMQNPDVLEKSVADSDDPDLTVVSSGDFWTIYRNTVNNEYNLRMFGNVPSSRPTAWNSYLKSIKHIEIEEATLTGSFASYFRGTDFPVLESVRIEQCNLSGVTSFEMAFYNSGIEKVIIRDNDYPKAPSLLTATQYMFSLCRNLSELDLSGLDTSAVTNMYAMFQNCTSLEELDLSNFDTSSATNMYSMFSGCRSLEKLDVSNFDTSSVAHMQFMFEKCSILEELDLSNFDTSSVTNMSYMFQLCPALKSLYLDNFTDAAIMTGMFAGTTSLTYLFVSHNLSTFNNLENTSWYDEKNWVQFSNLSQLQTYHRQQSEPIGYRKGAFLSLTMDAMGGEFEDAEEQKVQNKISGEYWEEVIPVKEGHYFDGWYLDQNFTNKFDFSLPAAVSTTIYAKWVENYTVIIPASISLNEASELKVQGINRGSKTLSVGLNYEETTISESNKLTLSNTADTTVRCLAPMSWDGSETNPEKAILTLAPGSEITEGDAVMEIKSPENIQAGKYTGNVVFSIKYE
>NZ_CP019615.1|WP_003728455.1|2569774_2570248_-|hypothetical-protein
MKKKRVVIISLLLLLVSVIGISSYFLFKDKINLLDVDHSAVEWNGKKQKDTSGEENTIAIPGFEKVTLYANETTQAVNFHNPEINDCYFKISLIHPDGSVLWISDLIEPGKGMYSIELEKTLAVGEYENAVLKYECFSLNDQSPLNGSEINLKLVVV
>NZ_CP019615.1|WP_003733326.1|2569269_2569755_-|hypothetical-protein
MNKLVLSTLSVAAMGMVFFSGGTAYAADKEGNTVVEYSVEGDYTLVVPEKVNLSNDNATEMSVKTINRNLEPGKEVEVTLSSGLSADGEIELQRVGATSDVITSSFKSNNSVVPMANPVIGSFSGYAMEETEVSKIQIGNPQGDKKAGAYQTTLTFTAAFK
>NZ_CP019615.1|WP_009918925.1|2568936_2569242_-|LPXTG-cell-wall-anchor-domain-containing-protein
MKRKLVLAMVLISFCGMFLLSPERVQASQTVVEVFISEDDLDVSEENIQEIPKKELAASSDKDNKQPILPKAGDTVTNYTLLGLVLILIWLIMQRKRKKKE
>NZ_CP019615.1|WP_009918927.1|2568594_2568861_-|transposase
MARIEYGEEIQKSLLVLYFRGSTIQSICREYGIPRYEFHKWMKLHDSDKLETKEVETFLQIRELKQQKNKLEEEILFLNEAINLLESP
>NZ_CP019615.1|WP_009918902.1|2567552_2568515_+|HD-domain-containing-protein
MKITDPLYGTFEIEPVLAELIQSPLVSRLAYVHQGGSSYLVNPLWDLSRLDHSIGVMLFIRKFGGSLEEQIAGLLHDVSHTAFSHVVDYALDFEEEDYHEQIFEDFVKTSTIPAILEKYGYSFEGIFDDISKWKILEQEAPELCADRIDYTLQDLYRHGKISLAEVEEFLQALVMVDGRLYLANIALAEWFVAQYYSEVIDYFYDPLNVYSYEILAEAMRIAFQQETITNADLRLTDAELLAKLNANSDAREKIQLLESPHLEENEVDFTYHHKKKMRLINPSVLVDGRLIPADELSEKVREMNDWASEKSKHGIYIKVT
>NZ_CP019615.1|WP_012681110.1|2565963_2566791_-|hypothetical-protein
MKKRLIGIITALLLVSGILLSPQMAQAETKVDYDALYQQGVSEGIINKADVSLETWIKENESEYNQVYQDGLKDGVYDASLSYEEWIKLNNYGQPPVVDENWEEVPQKPMLKGVYKGYNIKKGDILITNGTSSSGLLGHAAIANGNEYILDIPGAGKTTRQVPTSKWMSDYDPEGWVKVYRLKDSSVANAAANWADKNYYSTKGTSKQNIFPKYGMTGSRYSKNPTYCSKIVLQAYYFGTGNKPVVQVFPSLVTVYDLPNYFSKAYKPQQVKYFK
>NZ_CP019615.1|WP_003727314.1|2565576_2565936_-|DUF3139-domain-containing-protein
MKKYKKWWITIGLVLIICIIGYIYWFAIPKHTANEAVDDYLAAQKINSTQVKTRDIQKDWTRGGYYVTIVFKDDPNLVYEYNYNSKRNTPYHINLLVFKDGSSQEDDQVKHPPLQEQKD
>NZ_CP019615.1|WP_003733207.1|2564690_2565251_-|TetR/AcrR-family-transcriptional-regulator
MAESLITKKAIAGGLMELCQHKRFEKISIADITNICGLNRQTFYYHFTDKYDLLTWTYENDFFHCLADGITLGNWDKHVLKMLESIKENADFYKNTVSADASILSFCFSKLTNSLFMDLFEKIDTNGAVNEADRVFYAEFFSYGCSGVLIKWITRGFKEAPETIANQLFRLAKDTEFLANSMYREN
>NZ_CP019615.1|WP_003727311.1|2562880_2564581_-|oleate-hydratase
MKNKKRTLVALTGAAIGTGIAAKKISEQKAAEKERAVDEAIKARYYGDKQVYFVGGGIASLAGAVYLIRDANFDGKNIHIIEGMHILGGSNDGAGSVEHGFVCRGGRMLNEETYENFWDLFSSIPSLDMPNFSVTEEILNFDHLHPTHAQARLVDKDRNILDAHSMGFNNNDRMLMTKLLATPEEKLDNLTIRDWFDEHFFETNFWFMWQTTFAFQKWSSLFEFRRYMNRMMLEFSRIDTLEGVTRTPLNQYESLILPLKTFLDKHHVDFTINQTVEDIDFKDAPGITATALHLSDGSTIKLGPDDDVIMTNACMTDSATLGDMNTPAPKPEEKPISGELWYKVAQKKPNLGNPEPFFGHEEETNWQSFTVTCHGDKLLKRIERFTGNIPGSGALMTFKDSNWLMSTVVAAQPHFKAQDANTTIFWGYGLYPDRVGDFVKKPMKECTGEEILYELMCHLNWQDDFEEIKADIINVIPCYMPYIDAQFEPRAMSDRPAVVPEGSTNFAMISQFVEIPKDMVFTEEYSVRAARIAVYTLLDIDKKICPVTPHNRDPKVLAKATQTMFR
>NZ_CP019615.1|WP_003728089.1|2574413_2576495_-|BspA-family-leucine-rich-repeat-surface-protein
MKKFSMRVVLIISVLFIALGNANVSIAQERDTTNKLPEEELGSLDTSNLIAEEVAQDKPAEVENLEEIPTTDELMQNPDVREQSVADSDDPDLTAVSSGDYWTIYYNSANDEYSLRMFGNVPSSKPSAWNSYLKYIKHIEIEEATLTGDFSSYFRSNVFTVLESVRIERSNLSGVTSFARAFEGDSESESPLEKVIIRDNYYPETPSLTNISRMFTLCRKLSELDVSGLNTSSVTKMDTIFSNANSLKELDVSHFDTSSVTDMSSMFAACNSLEELDVSNFDTSSVTNMKYMLSGLHLKKLDVSNFDTSSVTNMYGMFAYCYNLEELDVSNFDTSSVNNMLHMFYVCNNLEELDLSNFDTSSVTNMFAMFAYCTSLKEIDVSNFDTSSVTTMSAMFFECSSLEALDLSNFDTSSVTTMASMFENSTALKSLYLDNFTDAASMTDMFKGTTSLTYLFVSHNLSTFNRLENTSWYDEKNWVQFSNLSQLQTYHRKQSEPTGYRKGAFLSLTMDAMGGEFEDAEEQKVQNKVSGEYWEEIVPVKEDYYFDGWYLDQNFTNKFDFSLPAAVSTTIYAKWVENYTVIIPASISLNEATELKVEGINRGSKALSVGLNRLATSVSESNELTLANTADTTVQCSAPLSWDGSENNPEKAILTLAPGSEITEGDAVMAIEAPENIQAGKYTGNLVFSINYE
>NZ_CP019615.1|WP_003728092.1|2578932_2580483_-|hydantoinase/oxoprolinase-family-protein
MYKIGIDVGGTNTDAVILDENQQLIHSVKMPTSEDIETGITESLHRVLSETGIDRSKVTHAMLGTTQCTNAIVERKKLAKVGVLRLGYPATASVLPYTAWPEDMVGFLSGKYKLTGGGYEYDGQVLSEINEAEIRETLASWKGEVESVAVVGVFSSLKNDQELAVQKIIEEELGADIPVSISSSVGSVGLIERENATILNAALFKVIAATSDGFEKALEQEGIAHAEIYLCQNDGTLMSLNYARQFPILTIACGPTNSIRGASYLAGLKDAMVLDVGGTTSDIGVLTDGFPRESSLAVDVGGVRTNFRMPDIISIGLGGGSIVREKDGDITIGPDSVGYRISEEALVFGGKTMTTTDIAVRLGRAEIGNPELVAHIPTDFAEKAYKKIAEMTEDAIDKMKTSSGSVSLVLVGGGSVIIPDEISGVAQIFRDKNGPVANAIGASISQISGQYEQIYIYSQIEREEALQDAEQKAREQATLAGAVTDSIEVVEVEEIPLAYHPGNATRLRVKVVGNLV
>NZ_CP019615.1|WP_003728093.1|2580475_2581576_-|DUF917-domain-containing-protein
MRYLDEQAIENIAIGAAFLGTGGGGDPYIGKMMALTAIKKHGPIKLLSPEEIADDDYFIPAAMMGAPSVLIEKFPKGDEFVRVFEKLGRYVGKEVKGTFPMEAGGVNSMIPIVVAAQLGLPMVDCDGMGRAFPELQMVTFHLDGISATPMAITDEKGNIGIMETIDNKWTERLARVTTVEMGASSLVSLYPCNGAQIKQSSIKNIVTLSEEIGKVIRETSMDEAEKLQKLLDVTHGYHLFEGKITDVVRETRAGFNFGRVKIDGLNKDTGSEVIVHFQNENLVAEKNGEPIAITPDLICMVDLETLMPVTTEALKYGKRVRVMALPADDAWRTDKGIETVGPRYFGYDVDFEPLEELVKKEERRHV
>NZ_CP019615.1|WP_003725189.1|2581576_2582860_-|cytosine-permease
MTEKKSVEQTQSWQSLAFVWTGAMICVPSLLVGGTLISGMPLWEAILIALLGYGVIVLFMIYQGMQSSDLGIPAVSVASQVFGEQGSKKIISILLAIACLGWFGIQANVCGAAFSQFLGIYGINLPVPVSSLIWGVIMLLSAIYGIRILSILNYIAVPVLLFVCIYGLVVSLNDGGLAIVENYKPAGSMSFMTGLAITIGSFALGAVIAGDYSQYTKSRKDVVKAAIVGILPSGVLMITVGAVLALTAGTADISVVFTNLGLPVLGIIGLILAAWTTNAVNAFSGGIAIINVFNISEKYHKVAVAVAGGLGTILAVIGILNHFVPIMSVLSAMVPPVAGVMIASYWIVQKGDKSKWAPVPGVNWLGVSSWLVGAVIAGIPVILTFFPELPQLPNQPLIGIILSLAVYLIGAKVLSGKTNNVENLEGK
>NZ_CP019615.1|WP_009918040.1|2582994_2584590_-|PucR-family-transcriptional-regulator
MSVKLADLMKLPSLKEAKVVSGKSGLSKLVSSISVLEYTEVALLEDDLFDNDEFYGSEIVVSAFVNIRDDVEAQCRTIERLHKVGEVALILYYVGIFVPKMDQKLIDFANELDFTIIVMPENEMSLRYSEVIYEVVEAIVKQEMTDTNFVTESLEQISSVRPPQRNIDTTLKILSDRTHTSLVLTDNSFQVINSITWPRTRHWDFERIIEASKQIGEHELVQLTLDERDFYTARKPIFQDGMQAMHLFMMKEKGVLTADVVMQITEVVQVFMNLWGRNYVEISTAELMKAILNDESVKMRRLGKILNVDVSSIKWMWLVKTEEIRDNEQVLAELKSFVASHFQVSLIDLFEDNIVVLLDNSVAQRDRTHTANEFAMMMKEHGIDLKITVCQGMEQTSDVQSAYSLVNEYKNAANAIYANKSIYSLQEIDFAAKCVEIVDRGELAIAEQMRPLKPLEDNDELIETLSVFLLEGGSNYNQAAELLFLHKNTIKYRIQRINELLQYPATKIPESYNLYLAVAIRRILGGNNNNK
>NZ_CP019615.1|WP_003721242.1|2584745_2585693_+|MoxR-family-ATPase
MSIEPSIKIEEIINEVEKVIVGKRHVVKLSLTALLAGGHVLLEDVPGVGKTMMVRTLSKTIGVSFKRIQFTPDLLPADVTGVSIFNPETRDFEFRPGPVMGNIVLADEINRTAPRTQAALLEGMAENSVTVDGITRKLANPFFVMATQNPIEYEGTYALPEAQLDRFLLKINIGYPTVEEEMQLLTLKQYQDPLDQTQQVVTLSELLDLKNKAKQVFIDDVLKNYIIRLVDATRKHPSVALGISPRGSLAFMQAAQAFALIEGRDYVIPDDIQYLAPYIFTHRLILKSEAYYNEETAESIIASILKNTSVPVEKR
>NZ_CP019615.1|WP_003728095.1|2585697_2586846_+|DUF58-domain-containing-protein
MLKKRLLLAFRWIIMLIIYAGLWTYTLFQGDTASWFLTYFFSFILLLLFLSSIYPLKAWKVNRRFVKNTYHDGDLVDMQVSFTRKSRYPVGYLLFQQKVPASFGNVSARQQVVYPLFKKHFTVTLAGFVGVRGIHSFPPVDVETSDAFGLLERSRQLSSEKSLTIYPTYFPDVLEKISEASPENERNAAYWTLKKNSNLHSLREFSSGDRISLIDWKSSAKSDQLMTREFENSATSRLSVIFYGASHPNFELSLRAAYSFIRKISEDNGEIRVTLLGDQTSKFAPAKGTSRLQDISTAFAEIAPVDSLTLQESLDSNLHSGEKILLFTPCIDTMLMQKVTRLTDNKQLQIITFQSEHSKAMDAPAIFLEPASLLSRWEREAK
>NZ_CP019615.1|WP_003725186.1|2586842_2589002_+|transglutaminase
MKRYLTLVMLFILSVLLISEWIYPFAELTELSTANWIILFITLSLGSFFLRLKYYWTIPLHIVMIIFVSGIYYAKGGILAGNWFVSFFQITFNGFRDMVQFRSSDISMDFILIVFLIALWLLSYITTYSILRKQRVMSVLVLTVAYLAVINTFTDYNSNWAIVRTVLEGFLLLHLALASRIAAPNRISADSLKRNGLFYHIFVILLLAVFVFSSLMLPKKAPIFPDPVPTIKNALGINTTRTVGYSEDDTTLGGALKKDNATVFTARAEKGHYWRVESKTVYTGTGWANANSADVISFSSGDNFPIQLTEQTTGATNTAEISFASSNDYMPYPYGTQTVNGAVDSFSANLTIERVGPVDTIKNYTVQLKTPVYNIEKMQNADFSTLSNAFVSQYTQTPKDLPDRVTKLANKVTKDADSIYDKTKAIERYLSASGTFTYSTEDAKETPRGADYVDQFLFETQIGYCDNFSTSMVVMLRSLGIPARWAKGYTPGEGEKKENDAKTTYTITNNNAHSWPEVFFPGTGWVPFEPTATFSNPENFQEPTTETANKPETPNDSTSTPETPNTADKTPEQDNGSSSTGETPKKEEPKTETAASNFEIPSWVWWIPAGLVVTLLALAIIFRRRIRRYLLLRSLRNSPEFGKTYHRLMKLLASYGYVRESSETLRHFSTRVDAELTTTEFSRLTKMYEAQIYSNNLTEKVITAEETQLVQQVIARLTK
>NZ_CP019615.1|WP_003728096.1|2589118_2589874_+|DUF4866-domain-containing-protein
MTTIFPKEQNVAPLFEQILANPTACRRFKDVFLDNLESYQETRGFEKDDTLFAKIILSAYRQSDVSALLLGVCGRTLFELLRQAFLIPKKLTVDNPFFLTDKEGNFIAKKDDVSNREQEKFQEIYQSDLHHSETTIFLVDDDDIVHSYEPDFSISTKRINKKRGILVLYSLPDTLKLGMTESEVYAFIWKTFLHIQEIIPSSRIFYGQETSENADELGVFLPIHHFEKKMLQNIEQVNELVDALREQMVNK
>NZ_CP019615.1|WP_003728097.1|2589894_2590560_+|DUF1275-domain-containing-protein
MARSRQISESIGLGLLLALAGGFMDAYSYIERGQVFANAQTGNILLFGINISEGNWAIAIQYFWPVVSFTVGIAISEVIHRRDIRRLHWRQLSVLIEVVILIGVAFISLDHNLIANSLISFVCGIQVESFRKMHGRGIATTMCIGNLRSATQNLCDYFEYKEKQYLRNSLLYFTVILSFIIGAVVGNFFIQLFAQYAILVCAFLQFIAFMMMFIDRESKII

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Crispr_ID: NZ_CP019615_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019615_3

2856568-2856722

Unclear

Consensus_repeat	Method
GTCTCTGGCAAAGCAAGTCTTAACTCTTCATCCGTAGGTGGTGGTGGAAA	CRISPRCasFinder

1 spacers

cas3

The CRISPR arrays of NZ_CP019615_3

>merge|NZ_CP019615|3|2856568-2856722|CRISPRCasFinder
GTCTCTGGCAAAGCAAGTCTTAACTCTTCATCCGTAGGTGGTGGTGGAAATTCGAATGAGCTCGGTTCCGATGTAGCAGGAGCATTAAAACCAAGAAGCATCGGTGTCTCTGGCAAAGCAAGTCTTAACTCTTCATCCGTAGGTGGTGGTGGAAA

>NZ_CP019615|3|2|2856568-2856722|CRISPRCasFinder
GTCTCTGGCAAAGCAAGTCTTAACTCTTCATCCGTAGGTGGTGGTGGAAA	TTCGAATGAGCTCGGTTCCGATGTAGCAGGAGCATTAAAACCAAGAAGCATCGGT
GTCTCTGGCAAAGCAAGTCTTAACTCTTCATCCGTAGGTGGTGGTGGAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019615.1\|WP_003722745.1\|2844638_2844917_-\|RNA-binding-S4-domain-containing-protein	unknown	unknown	gnl\|CDD\|224109
NZ_CP019615.1\|WP_003722728.1\|2863395_2864352_-\|ribose-phosphate-diphosphokinase	unknown	unknown	gnl\|CDD\|234929
NZ_CP019615.1\|WP_009917654.1\|2857713_2859246_-\|zinc-metalloproteinase-Mpl	unknown	unknown	gnl\|CDD\|225768
NZ_CP019615.1\|WP_003722729.1\|2862638_2863352_+\|listeriolysin-O-transcriptional-regulator-PrfA	unknown	unknown	gnl\|CDD\|223736
NZ_CP019615.1\|WP_003722726.1\|2866151_2866460_-\|septation-regulator-SpoVG	unknown	unknown	gnl\|CDD\|237321
NZ_CP019615.1\|WP_009917651.1\|2846560_2850100_-\|transcription-repair-coupling-factor	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|224118
NZ_CP019615.1\|WP_003725733.1\|2854294_2854618_-\|DUF5502-family-protein	unknown	unknown	gnl\|CDD\|340321
NZ_CP019615.1\|WP_003722725.1\|2866578_2866887_-\|septation-regulator-SpoVG	unknown	unknown	gnl\|CDD\|237321
NZ_CP019615.1\|WP_003728174.1\|2859580_2861170_-\|cholesterol-dependent-cytolysin-listeriolysin-O	unknown	unknown	gnl\|CDD\|366559
NZ_CP019615.1\|WP_031647994.1\|2861412_2862366_+\|phosphatidylinositol-specific-phospholipase-C	unknown	unknown	gnl\|CDD\|176497
NZ_CP019615.1\|WP_003725735.1\|2853315_2853648_+\|putative-heavy-metal-binding-protein	unknown	unknown	gnl\|CDD\|179228
NZ_CP019615.1\|WP_003722740.1\|2851554_2852178_-\|50S-ribosomal-protein-L25/general-stress-protein-Ctc	unknown	unknown	gnl\|CDD\|235534
NZ_CP019615.1\|WP_003725734.1\|2853700_2854162_-\|YehR-family-lipoprotein	unknown	unknown	gnl\|CDD\|227145
NZ_CP019615.1\|WP_003725737.1\|2850880_2851465_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379228
NZ_CP019615.1\|WP_003725738.1\|2850213_2850774_-\|aminoacyl-tRNA-hydrolase	unknown	unknown	gnl\|CDD\|235457
NZ_CP019615.1\|WP_003722723.1\|2868776_2869469_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213222
NZ_CP019615.1\|WP_003734712.1\|2854689_2855559_-\|phosphatidylcholine-phospholipase-C	unknown	unknown	gnl\|CDD\|214813
NZ_CP019615.1\|WP_003725507.1\|2867571_2868780_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|182528
NZ_CP019615.1\|WP_003740379.1\|2844940_2846530_-\|polysaccharide-biosynthesis-protein	unknown	unknown	gnl\|CDD\|240529
NZ_CP019615.1\|WP_003740374.1\|2864402_2865776_-\|bifunctional-UDP-N-acetylglucosamine-diphosphorylase/glucosamine-1-phosphate-N-acetyltransferase-GlmU	unknown	unknown	gnl\|CDD\|184643

Protein	Function_ID	Function_description	E-value
NZ_CP019615.1\|WP_003722745.1\|2844638_2844917_-\|RNA-binding-S4-domain-containing-protein	gnl\|CDD\|224109	COG1188, COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis].	4.52821e-30
NZ_CP019615.1\|WP_003722728.1\|2863395_2864352_-\|ribose-phosphate-diphosphokinase	gnl\|CDD\|234929	PRK01259, PRK01259, ribose-phosphate diphosphokinase.	0
NZ_CP019615.1\|WP_009917654.1\|2857713_2859246_-\|zinc-metalloproteinase-Mpl	gnl\|CDD\|225768	COG3227, LasB, Zinc metalloprotease (elastase) [Amino acid transport and metabolism].	1.15116e-139
NZ_CP019615.1\|WP_003722729.1\|2862638_2863352_+\|listeriolysin-O-transcriptional-regulator-PrfA	gnl\|CDD\|223736	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms].	9.59942e-12
NZ_CP019615.1\|WP_003722726.1\|2866151_2866460_-\|septation-regulator-SpoVG	gnl\|CDD\|237321	PRK13259, PRK13259, septation regulator SpoVG.	5.03804e-54
NZ_CP019615.1\|WP_009917651.1\|2846560_2850100_-\|transcription-repair-coupling-factor	gnl\|CDD\|224118	COG1197, Mfd, Transcription-repair coupling factor (superfamily II helicase) [DNA replication, recombination, and repair / Transcription].	0
NZ_CP019615.1\|WP_003725733.1\|2854294_2854618_-\|DUF5502-family-protein	gnl\|CDD\|340321	pfam17606, DUF5502, Family of unknown function (DUF5502). This is a family of unknown function found in Listeria.	2.43993e-44
NZ_CP019615.1\|WP_003722725.1\|2866578_2866887_-\|septation-regulator-SpoVG	gnl\|CDD\|237321	PRK13259, PRK13259, septation regulator SpoVG.	2.92652e-53
NZ_CP019615.1\|WP_003728174.1\|2859580_2861170_-\|cholesterol-dependent-cytolysin-listeriolysin-O	gnl\|CDD\|366559	pfam01289, Thiol_cytolysin, Thiol-activated cytolysin.	7.22171e-179
NZ_CP019615.1\|WP_031647994.1\|2861412_2862366_+\|phosphatidylinositol-specific-phospholipase-C	gnl\|CDD\|176497	cd00137, PI-PLCc, Catalytic domain of prokaryotic and eukaryotic phosphoinositide-specific phospholipase C. This subfamily corresponds to the catalytic domain present in prokaryotic and eukaryotic phosphoinositide-specific phospholipase C (PI-PLC), which is a ubiquitous enzyme catalyzing the cleavage of the sn3-phosphodiester bond in the membrane phosphoinositides (phosphatidylinositol, PI; Phosphatidylinositol-4-phosphate, PIP; phosphatidylinositol 4,5-bisphosphate, PIP2) to yield inositol phosphates (inositol monosphosphate, InsP; inositol diphosphate, InsP2; inositol trisphosphate, InsP3) and diacylglycerol (DAG). The higher eukaryotic PI-PLCs (EC 3.1.4.11) have a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. They play a critical role in most signal transduction pathways, controlling numerous cellular events, such as cell growth, proliferation, excitation and secretion. These PI-PLCs strictly require Ca2+ for their catalytic activity. They display a clear preference towards the hydrolysis of the more highly phosphorylated PI-analogues, PIP2 and PIP, to generate two important second messengers, InsP3 and DAG. InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. In contrast, bacterial PI-PLCs contain a single catalytic domain. Although their precise physiological function remains unclear, bacterial PI-PLCs may function as virulence factors in some pathogenic bacteria. They participate in Ca2+-independent PI metabolism. They are characterized as phosphatidylinositol-specific phospholipase C (EC 4.6.1.13) that selectively hydrolyze PI, not PIP or PIP2. The TIM-barrel type catalytic domain in bacterial PI-PLCs is very similar to the one in eukaryotic PI-PLCs, in which the catalytic domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. The catalytic mechanism of both prokaryotic and eukaryotic PI-PLCs is based on general base and acid catalysis utilizing two well conserved histidines, and consists of two steps, a phosphotransfer and a phosphodiesterase reaction. This superfamily also includes a distinctly different type of eukaryotic PLC, glycosylphosphatidylinositol-specific phospholipase C (GPI-PLC), an integral membrane protein characterized in the protozoan parasite Trypanosoma brucei. T. brucei GPI-PLC hydrolyzes the GPI-anchor on the variant specific glycoprotein (VSG), releasing dimyristyl glycerol (DMG), which may facilitate the evasion of the protozoan to the host#s immune system. It does not require Ca2+ for its activity and is more closely related to bacterial PI-PLCs, but not mammalian PI-PLCs.	1.59851e-111
NZ_CP019615.1\|WP_003725735.1\|2853315_2853648_+\|putative-heavy-metal-binding-protein	gnl\|CDD\|179228	PRK01119, PRK01119, putative heavy metal-binding protein.	8.98192e-61
NZ_CP019615.1\|WP_003722740.1\|2851554_2852178_-\|50S-ribosomal-protein-L25/general-stress-protein-Ctc	gnl\|CDD\|235534	PRK05618, PRK05618, 50S ribosomal protein L25/general stress protein Ctc; Reviewed.	2.38585e-63
NZ_CP019615.1\|WP_003725734.1\|2853700_2854162_-\|YehR-family-lipoprotein	gnl\|CDD\|227145	COG4808, COG4808, Uncharacterized protein conserved in bacteria [Function unknown].	1.52192e-59
NZ_CP019615.1\|WP_003725737.1\|2850880_2851465_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379228	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	1.9401e-09
NZ_CP019615.1\|WP_003725738.1\|2850213_2850774_-\|aminoacyl-tRNA-hydrolase	gnl\|CDD\|235457	PRK05426, PRK05426, peptidyl-tRNA hydrolase; Provisional.	1.72721e-108
NZ_CP019615.1\|WP_003722723.1\|2868776_2869469_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213222	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein. This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of lipoproteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyzes the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.	7.27113e-121
NZ_CP019615.1\|WP_003734712.1\|2854689_2855559_-\|phosphatidylcholine-phospholipase-C	gnl\|CDD\|214813	smart00770, Zn_dep_PLPC, Zinc dependent phospholipase C (alpha toxin). This domain conveys a zinc dependent phospholipase C activity (EC 3.1.4.3). It is found in a monomeric phospholipase C of Bacillus cereus as well as in the alpha toxin of Clostridium perfringens and Clostridium bifermentans, which is involved in haemolysis and cell rupture. It is also found in a lecithinase of Listeria monocytogenes, which is involved in breaking the 2-membrane vacuoles that surround the bacterium. Structure information: PDB 1ca1.	6.38793e-86
NZ_CP019615.1\|WP_003725507.1\|2867571_2868780_-\|ABC-transporter-permease	gnl\|CDD\|182528	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB.	5.06393e-62
NZ_CP019615.1\|WP_003740379.1\|2844940_2846530_-\|polysaccharide-biosynthesis-protein	gnl\|CDD\|240529	cd13124, MATE_SpoVB_like, Stage V sporulation protein B, also known as Stage III sporulation protein F, and related proteins. The integral membrane protein SpoVB has been implicated in the biosynthesis of the peptidoglycan component of the spore cortex in Bacillus subtilis. This model represents a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins. Proteins from the MATE family are involved in exporting metabolites across the cell membrane and are often responsible for multidrug resistance (MDR).	2.53346e-131
NZ_CP019615.1\|WP_003740374.1\|2864402_2865776_-\|bifunctional-UDP-N-acetylglucosamine-diphosphorylase/glucosamine-1-phosphate-N-acetyltransferase-GlmU	gnl\|CDD\|184643	PRK14354, glmU, bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU.	0

>NZ_CP019615.1|WP_003734712.1|2854689_2855559_-|phosphatidylcholine-phospholipase-C
MKFKKVVLGMCLTASVLVFPVTIKASACCDEYLKPPAAPHDIDSKLPHKLSWSADNPTNTDVNTHYWLFKQAEKILAKDVDHMRANLMNELKNFDKQIAQGIYDADHKNPYYDTSTFLSHFYNPDKDNTYLPGFANAKITGAKYFNQSVADYREGKFDTAFYKLGLAIHYYTDISQPMHANNFTAISYPPGYHCAYENYVDTIKHNYQATEDMVVKRFCSNDVKEWLYENAKRAKADYPKIVNAKTKKSYLVGNSEWKKDTVEPTGARLRDSQQTLAGFLEFWSKKTNE
>NZ_CP019615.1|WP_003725733.1|2854294_2854618_-|DUF5502-family-protein
MYIKGRLIFFFVMFVIALCSVLILLIIKMSVWKEEPFNLSDAKEIECLGSCKIKNTNQKIHFFSIKKNLFEEKGNMAGILNEHERKGADKSIFIVILDDEKGIANEE
>NZ_CP019615.1|WP_003725734.1|2853700_2854162_-|YehR-family-lipoprotein
MKMLKKGTTVLFVMIMAVMLVACGDKEETKTYSLSQNGVDSKLTYTYKGDKVTKQTAENTMSYASLGVASKEDAEKMLKATSDKFQGIDGLKEKIEYKDDKAIETLEVDYTKISSEDMNKIPGMSSNGDTSKGISMEESAKMLESQGYKEVSK
>NZ_CP019615.1|WP_003725735.1|2853315_2853648_+|putative-heavy-metal-binding-protein
MIVTTSPNIEGKQIIEYKKIVFGEVITGVNFMKDIGAGLRNFFGGRSQGYEDELINAREEAIREMEQRAKDIGANAVIGVDIDYEVLGADNGMLMVTASGTAVVIEAQDY
>NZ_CP019615.1|WP_003722740.1|2851554_2852178_-|50S-ribosomal-protein-L25/general-stress-protein-Ctc
MATTLEVQKRETTQHSEVTRLRSEGKVPGIIYGYKSENVPVSVDSLELIKAVRDNGRNAVFSVTVDGKKLNVLLHEYQVDPLKDVLVHVDLLAVDMNEEVETDVRVVLVGDAPGVKAGGVLQQIIHDVKVSATPEKLPETIELDISSLEIGDVLTTNDLPENKDYVVQAEEEETVVTVSAPRAEEEPTTTEAPEPEAVHGKDEEPVE
>NZ_CP019615.1|WP_003725737.1|2850880_2851465_-|GNAT-family-N-acetyltransferase
MLDKSVPHISAIMVNHDATNYPEFHLPEGYSFCFYKDGLEEDWCRLQLETGQVLSMDSIRARFETEFGNEKEKLAKRCVFVEAPNGEIIGTAMLWDGNTFGEMASRIHWVAVLDSHGGKGIAKALLSKILGLNKSSFVYLTTQTGSYQAIYLYQKFGFEKYVGKTPENWKTVNFQEEKEAAWQIIENKIAEHQA
>NZ_CP019615.1|WP_003725738.1|2850213_2850774_-|aminoacyl-tRNA-hydrolase
MKLIAGLGNPGKKYERTRHNVGFMVVDELSFRHQTPWKKSKFNGMTSEIIVGGEKMILVKPLTFMNASGECIRPLMDYYNIPIEDVVIVYDDLDLPVGKIRLRQKGSAGGHNGMKSIIQHVKTQEFNRIRVGVSRPLKGEVIHYVLGDFPKAEQPDIIAAIQKSADAIEDFAQTPFIEVMNKYNQK
>NZ_CP019615.1|WP_009917651.1|2846560_2850100_-|transcription-repair-coupling-factor
MKGLQQLIYEQKDIRAVLNALDEKEKAQLVTGLTGSSRALFASVVEGASKRPVVFVTHNLYHAQKLYDDLLSLMDVDRLFLYPADELISSELSISSPELRGQRVEALDFLLSGKPGIVIVPVAGLRKMLPPVSLWKHFNISIVEGEEIDPDVLRQKLVTMGYTMSGMVNTPGEFSVRGGIIDIYPITEEFPIRIELFDTEVDSLRFFDVETQRSTTRVEEFRLLPATEIILDQSYYPDIVKRLEKKMTHTLNELKENEDKQALVENLEEDLEMLRSGVKPDMFFKYIGLAYPDPASLFDYFPKNTAILLDEFGRILETEESLEREEAEWQTETLSRMETVRDVQVSHSFKKLLEANHSPKIYLSLFQKQMASMRVSKTTNIVYKQMQQFHGQMNVLKTELESWHKNNYAVVILAPNLERAEKMQQTLTDYDMESTILKKESDVPKYGMVQFVIGTFQNGFELPLAKVAIISETELFNKKIKKVKKRQKLSNAERIQSYSELKVGDYVVHVNHGIARYVGMETLDINGVHKDYLLLVYQGEDKLFIPVDQLDLVQKYVGAEGKSPRLNKLGGAEWKRVKKKVQASVQDIADDLIKLYAEREAEKGYAFSADDEMQREFEEAFPYQETEDQLRSISEIKKDMERPRPMDRLLVGDVGYGKTEVALRAAFKAIMDGKQVAFLVPTTILAQQHFETMKERFQGFPIEIGLLSRFRTKKQQTETLKGMKNGTVDVVVGTHRLLSKDVEYQDLGLLIVDEEQRFGVTHKEKIKQMRSKIDVLTLTATPIPRTLHMSMLGVRDLSVIETPPANRFPVQTYVAEQNNVLVREAIERELARDGQVYYLYNRVESITQKADEISAMVPDARVATAHGQMGESELESVILSFLEGEFDVLVTTTIIETGVDIPNVNTLFVQDADRMGLSQLYQLRGRVGRWNRIAYAYFMYQKDKILREEAEKRLSAIKEFTELGSGFKIAMRDLSIRGAGNILGAQQHGFIDSVGFDLYSQMLKEAIESKKPKEEQKQIVPVEIDIQADAYIPEYYITDGRQKIEMYKRFRNIETLSELEDLQSDMIDRFGEYPEEVEYLFTMTELKVHALEVGIESVKQEQNKITMLFSESGTAGIRGDIVMQIIGEFGRMVGVGMEGTQLKITINVQNKPLKEWLYQVKSLAEKLRGAMKERASAEN
>NZ_CP019615.1|WP_003740379.1|2844940_2846530_-|polysaccharide-biosynthesis-protein
MPERSMKRLMKGAAWLTAASLISKILSAVYRVPFQNMVGDVGFYIFQQVYPIYGIAMTLALGGFPVVISKMLAEAEGDVRRQQIIMRAVSRMLRIVSIVIFAFLFLFANPIAIMMGDPALSELIRVISFVFLLMPQLAFMRGFFQGEGDMIPTAISQTVEQIIRVAIILIGAGLALHFNFDLYDAGSMAMSGAFFGGVSGIFILRHFYNKKVRLGEGIQPAVFTNKEEKVGIGRTFLRQSVAICVVSSMLILFQLVDSFQVYRLMSDSGIPDFIAKSLKGVYDRGQPILQLGLVISTGLALALVPMITAARVQDQQKELKRSVLLAIKITLILAGAETIGLIVIMRPLNQMLFQTPDGTFVLQLFMPAVFLSSLIIMLSSILQGFGKITVPAVGVGIGLIVKWVTGGILIPRLATVGASVSTCVGLLVILLICYVSLKQTIRVPFVEKTMLFRLIAALALMAVFPCLFEWLAPLNTRLGSAFQAIVSALVGGGIFLVFSLRYKLLGPKDFVFLPFGSKLLALSKLVARK
>NZ_CP019615.1|WP_003722745.1|2844638_2844917_-|RNA-binding-S4-domain-containing-protein
MATTMRLDKYLKVSRLIKRRTVAKEVAEKGRIAVNGVTAKPGTNVKSGDELVIRFGPKIVTAKIERLEENAKKEQATEMYTIIKEERTDESR
>NZ_CP019615.1|WP_009917654.1|2857713_2859246_-|zinc-metalloproteinase-Mpl
MKSKLICIIMVIAFQAHFNMAVKADSVGEERLRNNIQAKRNPADLKALPDSCEAKDFYKNFKILDMTKDKLGVTHYTLALSSEGYLTDNDEIKVHVTPDNKITFINGDLQQGQLRITNQIKITEKNAIEKAFEAIGQSEAHVKSYIGNPVKEKEIIINSRTKRLVYNIKLIFAEPEVASWIIQVDAETGAILKKQNMLSEVERADTHKDFQALGKGANRLLQRPLHVMKINDLFYLVDRTHKGLIRTFDLNHKTDASFGKVVSNKTNMFTDPEFSSAVDAHFYASEVYDYYKNVHQLESLDGKGGEIDSFVHYGLNCNNAFWDGREILYGDGDKKNFKPFSCAKTIVGHELTHAVIQYSAGLEYEGQSGALNESFADVFGYFIAPNHWLIGEDVCVRGLRDGRIRSIKDPDKYNQAAHMKDYESLPITEEGDWGGVHFNSGIPNKAAYNTITKLGKEKTEQLYFRALKYYLTKKAQFTDAKKALQQAAKDLYGEDASKKVAEAWEAVGVN
>NZ_CP019615.1|WP_003728174.1|2859580_2861170_-|cholesterol-dependent-cytolysin-listeriolysin-O
MKKIMLVFITLILVSLPIAQQTEAKDASAFNKENLISSMAPPASPPASPKTPIEKKHADEIDKYIQGLDYNKNNVLVYHGDAVTNVPPRKGYKDGNEYIVVEKKKKSINQNNADIQVVNAISSLTYPGALVKANSELVENQPDVLPVKRDSLTLSIDLPGMTNQDNKIVVKNATKSNVNNAVNTLVERWNEKYAQAYPNVSAKIDYDDEMAYSESQLIAKFGTAFKAVNNSLNVNFGAISEGKMQEEVISFKQIYYNVNVNEPTRPSRFFGKAVTKEQLQALGVNAENPPAYISSVAYGRQVYLKLSTNSHSTKVKAAFDAAVSGKSVSGDVELTNIIKNSSFKAVIYGGSAKDEVQIIDGNLGDLRDILKKGATFNRETPGVPIAYTTNFLKDNELAVIKNNSEYIETTSKAYTDGKINIDHSGGYVAQFNISWDEINYDPEGNEIVQHKNWSENNKSKLAHFTSSIYLPGNARNINVYAKECTGLAWEWWRTVIDDRNLPLVKNRNISIWGTTLYPKYSNSVDNPIE
>NZ_CP019615.1|WP_031647994.1|2861412_2862366_+|phosphatidylinositol-specific-phospholipase-C
MYKNYLQRTLVLVLCFILCFFTFPLGGKAYSLNNWNKPIKNSVTTKQWMSALPDTTSLAALSIPGTHDTMSYNGDMTWTLTKPLAQTQTMSLYQQLEAGIRYIDIRAKDNLKIYHGPIFLNASLSGVLETITQFLKKNPKETIIMRLKDEQNSNDSFDYRIQPLINIYKDYFYTTPRTDTSNKIPTLKNVRGKILLLSENHTKKPLVINSHKFGMQFGASNQVIQDDYNGPSVKTKFKEIVQTAYQASKADNKLFLNHISATSLTFTPRQYAAALNNKVEQFVLNLTSEKVRGLGILIMDFPEKQTIKNIIKNNKFN
>NZ_CP019615.1|WP_003722729.1|2862638_2863352_+|listeriolysin-O-transcriptional-regulator-PrfA
MNAQAEEFKKYLETNGIKPKQFHKKELIFNQWDPQEYCIFLYDGITKLTSISENGTIMNLQYYKGAFVIMSGFIDTETSVGYYNLEVISEQATAYVIKINELKELLSKNLTHFFYVFQTLQKQVSYSLAKFNDFSINGKLGSICGQLLILTYVYGKETPDGIKITLDNLTMQELGYSSGIAHSSAVSRIISKLKQEKVIVYKNSCFYVQNLDYLKRYAPKLDEWFYLACPATWGKLN
>NZ_CP019615.1|WP_003722728.1|2863395_2864352_-|ribose-phosphate-diphosphokinase
MSNEYFDPKLKIFSLNSNRELAEEIAKEVGIELGKSSVTHFSDGEIQINIEESIRGCHVYVIQSTSNPVNQNLMELLIMIDALKRASAATINIVMPYYGYARQDRKARSREPITAKLVANLIETAGATRMITLDMHAPQIQGFFDIPIDHLNAVRLLSDYFSERHLGDDLVVVSPDHGGVTRARKMADRLKAPIAIIDKRRPRPNVAEVMNIVGNVEGKVCIIIDDIIDTAGTITLAAKALREAGATKVYACCSHPVLSGPAMKRIEESPIEKLVVTNSIALPEEKWIDKMEQLSVAALLGEAIVRVHENASVSSLFE
>NZ_CP019615.1|WP_003740374.1|2864402_2865776_-|bifunctional-UDP-N-acetylglucosamine-diphosphorylase/glucosamine-1-phosphate-N-acetyltransferase-GlmU
MSKRYAVVLAAGQGTRMKSKLYKVLHPVCGKPMVEHVVDQISTLNVDKVVTIVGHGAEKVQEHLAGKSEFVKQEEQLGTAHAVLQAKAELAGKDGVTLVVCGDTPLIEASTMEALLKYHHEKRAKATILTTVIEDPTGYGRIIRDDLGIVEKIVEHKDATEKEQRISEINTGTYCFDNKALFEALENVSNDNVQGEYYLPDVIKILKDSDEVVAAYRMESFEESLGVNDRIALAEASRLMQRRINENHMRNGVTLVNPENTYIDIDVKIGQDTVIEPGVMLHGETVIGDDCVVTSGSEIVNSVIGERVHVRTSSIFESKVGDDVQIGPYAHLRPESDIHDHVKIGNYVETKKAVVGEGTKLPHFIYMGDAEIGKNVNVGCGSIAVNYDGKNKAKTIIGDNVFVGCNSNLIAPVKVGDRAFIAAGSTITKDVPDDALGIARAKQDNKLGYAKHLNHGK
>NZ_CP019615.1|WP_003722726.1|2866151_2866460_-|septation-regulator-SpoVG
MQVTDVRLRRVETDGRMRAIASITLDEEFVVHDIRVIDGNNGLFVAMPSKRGVDGEFRDIAHPINSDTRAKIQEVVLAEYERVGEEEATAVTEEESESVSAE
>NZ_CP019615.1|WP_003722725.1|2866578_2866887_-|septation-regulator-SpoVG
MEITDVRLRRVETDGRMKAISSITIDGEFVIHDIRVIDGNEGLFVAMPSKRTPDGEFRDIAHPINSGTRAKIQEAVLAAYEVADEPAVNEESSADESIVEEN
>NZ_CP019615.1|WP_003725507.1|2867571_2868780_-|ABC-transporter-permease
MNVLQSMKMAWKQLKASKLRSFLTMLGIIIGVASVILLVSLGNGVTQEVDDQMGDLGSNLITVVNSSVNPNDKYTYDEVMKYQNIDGVKSVSPELSGQVNATFDYKNSSNKVIGTNDQYKAARSLEMKEGRFLLPIDTEYGQKVAVIGSTVASDLFGFGDPIGETIRLNGMPYKVVGVLKEKGASMMGSSDDQIFIPISSAQRLLKDTNVRTIYVETKSAEDVDFVVNTLESRLAIKFGDEKEQEKNASSAQMGPSYQVINQQEILNAFNTISTTLTTALGAIAAISLVVGGIGIMNIMLVSVSERTREIGIRKALGAKKRAILLQFLIESIVISVCGGIIGIIIGVSGALIFGSVAGISSGITAGTIIFSFVFSLCIGVIFGIAPANKASKLRPIDALRSE
>NZ_CP019615.1|WP_003722723.1|2868776_2869469_-|ABC-transporter-ATP-binding-protein
MPKPLIDMKNLTKTYTLGGETFKALDDVTFTVEQGEFLSIVGPSGSGKSTLMNMIGCLDVPDEGSYHLDDVDVFKLSDNKLSEIRNKKIGFIFQQFNLLPKLSAFENVELPLIYAGLSVSAREKAAIECLEKVGLLEKRRNLPTQLSGGQQQRVAIARALAGKPQILLADEPTGALDSKTGKEVMGILQELNRAGNTIVMITHDPTIASYGTRSIRIQDGKLFHEEATQA

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP019615_1	1.28\|274208\|30\|NZ_CP019615\|CRISPRCasFinder,CRT,PILER-CR	274208-274237	30	NZ_CP019615.1	297594-297623	0	1.0
NZ_CP019615_1	1.28\|274208\|30\|NZ_CP019615\|CRISPRCasFinder,CRT,PILER-CR	274208-274237	30	NZ_CP019615.1	622387-622416	0	1.0
NZ_CP019615_1	1.22\|273812\|30\|NZ_CP019615\|CRISPRCasFinder,CRT,PILER-CR	273812-273841	30	NZ_CP019615.1	1751075-1751104	2	0.933

1. spacer 1.28|274208|30|NZ_CP019615|CRISPRCasFinder,CRT,PILER-CR matches to position: 297594-297623, mismatch: 0, identity: 1.0

ttgatgagaatctatacaggtacttaaccg	CRISPR spacer
ttgatgagaatctatacaggtacttaaccg	Protospacer
******************************

2. spacer 1.28|274208|30|NZ_CP019615|CRISPRCasFinder,CRT,PILER-CR matches to position: 622387-622416, mismatch: 0, identity: 1.0

ttgatgagaatctatacaggtacttaaccg	CRISPR spacer
ttgatgagaatctatacaggtacttaaccg	Protospacer
******************************

3. spacer 1.22|273812|30|NZ_CP019615|CRISPRCasFinder,CRT,PILER-CR matches to position: 1751075-1751104, mismatch: 2, identity: 0.933

taataaacaagaaatattacttcatgaatc	CRISPR spacer
taataaacaagaaatattgcttcacgaatc	Protospacer
******************.*****.*****

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP019615_1	1.13\|273218\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	273218-273247	30	KP399678	Listeria phage vB_LmoS_293, complete genome	1775-1804	0	1.0
NZ_CP019615_1	1.17\|273482\|30\|NZ_CP019615\|CRISPRCasFinder,CRT,PILER-CR	273482-273511	30	KP399678	Listeria phage vB_LmoS_293, complete genome	38991-39020	0	1.0
NZ_CP019615_1	1.22\|273812\|30\|NZ_CP019615\|CRISPRCasFinder,CRT,PILER-CR	273812-273841	30	MH341453	Listeria phage PSU-VKH-LP041, complete genome	4756-4785	0	1.0
NZ_CP019615_1	1.24\|273944\|30\|NZ_CP019615\|CRISPRCasFinder,CRT,PILER-CR	273944-273973	30	MH341452	Listeria phage PSU-VKH-LP040, complete genome	22961-22990	0	1.0
NZ_CP019615_1	1.24\|273944\|30\|NZ_CP019615\|CRISPRCasFinder,CRT,PILER-CR	273944-273973	30	KJ094022	Listeria phage LP-030-3, complete genome	31899-31928	0	1.0
NZ_CP019615_1	1.24\|273944\|30\|NZ_CP019615\|CRISPRCasFinder,CRT,PILER-CR	273944-273973	30	KP399678	Listeria phage vB_LmoS_293, complete genome	23462-23491	0	1.0
NZ_CP019615_1	1.25\|274010\|30\|NZ_CP019615\|CRISPRCasFinder,CRT,PILER-CR	274010-274039	30	KJ094023	Listeria phage LP-101, complete genome	19300-19329	0	1.0
NZ_CP019615_1	1.30\|274340\|30\|NZ_CP019615\|CRISPRCasFinder,CRT,PILER-CR	274340-274369	30	NZ_LR134403	Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence	204429-204458	0	1.0
NZ_CP019615_1	1.30\|274340\|30\|NZ_CP019615\|CRISPRCasFinder,CRT,PILER-CR	274340-274369	30	AJ312240	Bacteriophage PSA complete genome	32354-32383	0	1.0
NZ_CP019615_1	1.30\|274340\|30\|NZ_CP019615\|CRISPRCasFinder,CRT,PILER-CR	274340-274369	30	KJ094023	Listeria phage LP-101, complete genome	38672-38701	0	1.0
NZ_CP019615_1	1.34\|274604\|30\|NZ_CP019615\|CRISPRCasFinder,CRT,PILER-CR	274604-274633	30	MH341452	Listeria phage PSU-VKH-LP040, complete genome	22018-22047	0	1.0
NZ_CP019615_1	1.34\|274604\|30\|NZ_CP019615\|CRISPRCasFinder,CRT,PILER-CR	274604-274633	30	DQ003637	Listeria phage A500, complete genome	23980-24009	0	1.0
NZ_CP019615_1	1.34\|274604\|30\|NZ_CP019615\|CRISPRCasFinder,CRT,PILER-CR	274604-274633	30	KJ094022	Listeria phage LP-030-3, complete genome	30956-30985	0	1.0
NZ_CP019615_1	1.34\|274604\|30\|NZ_CP019615\|CRISPRCasFinder,CRT,PILER-CR	274604-274633	30	KP399678	Listeria phage vB_LmoS_293, complete genome	22519-22548	0	1.0
NZ_CP019615_1	1.13\|273218\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	273218-273247	30	MH341452	Listeria phage PSU-VKH-LP040, complete genome	1822-1851	1	0.967
NZ_CP019615_1	1.13\|273218\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	273218-273247	30	DQ003637	Listeria phage A500, complete genome	1779-1808	1	0.967
NZ_CP019615_1	1.14\|273284\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	273284-273313	30	MN172529	Listeria phage LP-039, complete genome	36996-37025	1	0.967
NZ_CP019615_1	1.14\|273284\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	273284-273313	30	MT438761	Listeria virus P61, complete genome	48737-48766	1	0.967
NZ_CP019615_1	1.14\|273284\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	273284-273313	30	MT178766	Listeria virus P100plus, complete genome	3982-4011	1	0.967
NZ_CP019615_1	1.14\|273284\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	273284-273313	30	NC_025440	Listeria phage WIL-1, complete genome	128854-128883	1	0.967
NZ_CP019615_1	1.14\|273284\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	273284-273313	30	NC_047872	Listeria phage LMTA-94, complete genome	94435-94464	1	0.967
NZ_CP019615_1	1.14\|273284\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	273284-273313	30	DQ003638	Listeria phage A511, complete genome	37493-37522	1	0.967
NZ_CP019615_1	1.14\|273284\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	273284-273313	30	MT178767	Listeria virus P200, complete genome	3982-4011	1	0.967
NZ_CP019615_1	1.14\|273284\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	273284-273313	30	DQ004855	Listeria bacteriophage P100, complete genome	3982-4011	1	0.967
NZ_CP019615_1	1.14\|273284\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	273284-273313	30	KJ591604	Listeria phage LMTA-148, complete genome	44926-44955	1	0.967
NZ_CP019615_1	1.14\|273284\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	273284-273313	30	KJ591605	Listeria phage LMTA-57, complete genome	105204-105233	1	0.967
NZ_CP019615_1	1.14\|273284\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	273284-273313	30	KJ094033	Listeria phage LP-048, complete genome	39453-39482	1	0.967
NZ_CP019615_1	1.14\|273284\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	273284-273313	30	KJ668715	Listeria phage LMTA-34, partial genome	81312-81341	1	0.967
NZ_CP019615_1	1.14\|273284\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	273284-273313	30	NC_042048	Listeria phage LMTA-34, complete genome	52488-52517	1	0.967
NZ_CP019615_1	1.14\|273284\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	273284-273313	30	MK792752	UNVERIFIED: Listera phage vB-LmoM-SH3-3, complete genome	102697-102726	1	0.967
NZ_CP019615_1	1.14\|273284\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	273284-273313	30	FJ147488	Listeria phage 20422-1 terminase large subunit (terL) gene, partial cds; and unknown gene	1438-1467	1	0.967
NZ_CP019615_1	1.14\|273284\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	273284-273313	30	NC_024360	Listeria phage LMSP-25, complete genome	52488-52517	1	0.967
NZ_CP019615_1	1.14\|273284\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	273284-273313	30	JQ797329	Listeria phage vB_LmoM_AG20, complete genome	36840-36869	1	0.967
NZ_CP019615_1	1.14\|273284\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	273284-273313	30	KJ535721	Listeria phage List-36, complete genome	91531-91560	1	0.967
NZ_CP019615_1	1.17\|273482\|30\|NZ_CP019615\|CRISPRCasFinder,CRT,PILER-CR	273482-273511	30	DQ003637	Listeria phage A500, complete genome	36675-36704	1	0.967
NZ_CP019615_1	1.17\|273482\|30\|NZ_CP019615\|CRISPRCasFinder,CRT,PILER-CR	273482-273511	30	KP399677	Listeria phage vB_LmoS_188, complete genome	36707-36736	1	0.967
NZ_CP019615_1	1.17\|273482\|30\|NZ_CP019615\|CRISPRCasFinder,CRT,PILER-CR	273482-273511	30	KJ094022	Listeria phage LP-030-3, complete genome	6230-6259	1	0.967
NZ_CP019615_1	1.23\|273878\|30\|NZ_CP019615\|CRISPRCasFinder,CRT,PILER-CR	273878-273907	30	MN172529	Listeria phage LP-039, complete genome	107224-107253	1	0.967
NZ_CP019615_1	1.23\|273878\|30\|NZ_CP019615\|CRISPRCasFinder,CRT,PILER-CR	273878-273907	30	MT438761	Listeria virus P61, complete genome	118427-118456	1	0.967
NZ_CP019615_1	1.23\|273878\|30\|NZ_CP019615\|CRISPRCasFinder,CRT,PILER-CR	273878-273907	30	MT668624	Listeria phage LP-Mix_6.2, complete genome	108544-108573	1	0.967
NZ_CP019615_1	1.23\|273878\|30\|NZ_CP019615\|CRISPRCasFinder,CRT,PILER-CR	273878-273907	30	MT178766	Listeria virus P100plus, complete genome	73608-73637	1	0.967
NZ_CP019615_1	1.23\|273878\|30\|NZ_CP019615\|CRISPRCasFinder,CRT,PILER-CR	273878-273907	30	NC_025440	Listeria phage WIL-1, complete genome	59508-59537	1	0.967
NZ_CP019615_1	1.23\|273878\|30\|NZ_CP019615\|CRISPRCasFinder,CRT,PILER-CR	273878-273907	30	NC_047872	Listeria phage LMTA-94, complete genome	26323-26352	1	0.967
NZ_CP019615_1	1.23\|273878\|30\|NZ_CP019615\|CRISPRCasFinder,CRT,PILER-CR	273878-273907	30	DQ003638	Listeria phage A511, complete genome	107189-107218	1	0.967
NZ_CP019615_1	1.23\|273878\|30\|NZ_CP019615\|CRISPRCasFinder,CRT,PILER-CR	273878-273907	30	MT178767	Listeria virus P200, complete genome	73609-73638	1	0.967
NZ_CP019615_1	1.23\|273878\|30\|NZ_CP019615\|CRISPRCasFinder,CRT,PILER-CR	273878-273907	30	DQ004855	Listeria bacteriophage P100, complete genome	73604-73633	1	0.967
NZ_CP019615_1	1.23\|273878\|30\|NZ_CP019615\|CRISPRCasFinder,CRT,PILER-CR	273878-273907	30	KJ591604	Listeria phage LMTA-148, complete genome	117422-117451	1	0.967
NZ_CP019615_1	1.23\|273878\|30\|NZ_CP019615\|CRISPRCasFinder,CRT,PILER-CR	273878-273907	30	KJ591605	Listeria phage LMTA-57, complete genome	36087-36116	1	0.967
NZ_CP019615_1	1.23\|273878\|30\|NZ_CP019615\|CRISPRCasFinder,CRT,PILER-CR	273878-273907	30	KJ094033	Listeria phage LP-048, complete genome	109681-109710	1	0.967
NZ_CP019615_1	1.23\|273878\|30\|NZ_CP019615\|CRISPRCasFinder,CRT,PILER-CR	273878-273907	30	KJ668715	Listeria phage LMTA-34, partial genome	12423-12452	1	0.967
NZ_CP019615_1	1.23\|273878\|30\|NZ_CP019615\|CRISPRCasFinder,CRT,PILER-CR	273878-273907	30	MN128594	Listeria phage LP-066, complete genome	108130-108159	1	0.967
NZ_CP019615_1	1.23\|273878\|30\|NZ_CP019615\|CRISPRCasFinder,CRT,PILER-CR	273878-273907	30	NC_042048	Listeria phage LMTA-34, complete genome	121603-121632	1	0.967
NZ_CP019615_1	1.23\|273878\|30\|NZ_CP019615\|CRISPRCasFinder,CRT,PILER-CR	273878-273907	30	MK792752	UNVERIFIED: Listera phage vB-LmoM-SH3-3, complete genome	28060-28089	1	0.967
NZ_CP019615_1	1.23\|273878\|30\|NZ_CP019615\|CRISPRCasFinder,CRT,PILER-CR	273878-273907	30	KJ094030	Listeria phage LP-083-2, complete genome	113296-113325	1	0.967
NZ_CP019615_1	1.23\|273878\|30\|NZ_CP019615\|CRISPRCasFinder,CRT,PILER-CR	273878-273907	30	NC_024360	Listeria phage LMSP-25, complete genome	121603-121632	1	0.967
NZ_CP019615_1	1.23\|273878\|30\|NZ_CP019615\|CRISPRCasFinder,CRT,PILER-CR	273878-273907	30	JQ797329	Listeria phage vB_LmoM_AG20, complete genome	106528-106557	1	0.967
NZ_CP019615_1	1.23\|273878\|30\|NZ_CP019615\|CRISPRCasFinder,CRT,PILER-CR	273878-273907	30	KJ535721	Listeria phage List-36, complete genome	21275-21304	1	0.967
NZ_CP019615_1	1.23\|273878\|30\|NZ_CP019615\|CRISPRCasFinder,CRT,PILER-CR	273878-273907	30	KJ094031	Listeria phage LP-124, complete genome	75411-75440	1	0.967
NZ_CP019615_1	1.25\|274010\|30\|NZ_CP019615\|CRISPRCasFinder,CRT,PILER-CR	274010-274039	30	NC_003216	Listeria phage A118, complete genome	20282-20311	1	0.967
NZ_CP019615_1	1.25\|274010\|30\|NZ_CP019615\|CRISPRCasFinder,CRT,PILER-CR	274010-274039	30	AJ242593	Bacteriophage A118 complete genome	20282-20311	1	0.967
NZ_CP019615_1	1.25\|274010\|30\|NZ_CP019615\|CRISPRCasFinder,CRT,PILER-CR	274010-274039	30	X85008	Bacteriophage A118 hol118 and ply118 genes	530-559	1	0.967
NZ_CP019615_1	1.27\|274142\|30\|NZ_CP019615\|CRISPRCasFinder,CRT,PILER-CR	274142-274171	30	KJ094027	Listeria phage LP-083-1 contig 1, partial genome	8889-8918	1	0.967
NZ_CP019615_1	1.27\|274142\|30\|NZ_CP019615\|CRISPRCasFinder,CRT,PILER-CR	274142-274171	30	DQ003641	Listeria phage P35, complete genome	8612-8641	1	0.967
NZ_CP019615_1	1.3\|272557\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	272557-272586	30	JB137888	Sequence 7 from Patent WO2012159774	2400-2429	2	0.933
NZ_CP019615_1	1.3\|272557\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	272557-272586	30	KJ094021	Listeria phage LP-114, complete genome	36444-36473	2	0.933
NZ_CP019615_1	1.14\|273284\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	273284-273313	30	MT668624	Listeria phage LP-Mix_6.2, complete genome	38343-38372	2	0.933
NZ_CP019615_1	1.14\|273284\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	273284-273313	30	MN128594	Listeria phage LP-066, complete genome	38445-38474	2	0.933
NZ_CP019615_1	1.14\|273284\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	273284-273313	30	NC_041862	Listeria phage LP-064, complete genome	46957-46986	2	0.933
NZ_CP019615_1	1.14\|273284\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	273284-273313	30	KJ094030	Listeria phage LP-083-2, complete genome	43626-43655	2	0.933
NZ_CP019615_1	1.14\|273284\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	273284-273313	30	JX126918	Listeria phage LP-125, complete genome	46956-46985	2	0.933
NZ_CP019615_1	1.14\|273284\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	273284-273313	30	KJ094031	Listeria phage LP-124, complete genome	5741-5770	2	0.933
NZ_CP019615_1	1.15\|273350\|30\|NZ_CP019615\|CRISPRCasFinder,CRT,PILER-CR	273350-273379	30	KJ094028	Listeria phage LP-083-1 contig 2, partial genome	4152-4181	2	0.933
NZ_CP019615_1	1.15\|273350\|30\|NZ_CP019615\|CRISPRCasFinder,CRT,PILER-CR	273350-273379	30	DQ003641	Listeria phage P35, complete genome	20293-20322	2	0.933
NZ_CP019615_1	1.22\|273812\|30\|NZ_CP019615\|CRISPRCasFinder,CRT,PILER-CR	273812-273841	30	NC_009813	Listeria phage B054, complete genome	4756-4785	2	0.933
NZ_CP019615_1	1.23\|273878\|30\|NZ_CP019615\|CRISPRCasFinder,CRT,PILER-CR	273878-273907	30	NC_041862	Listeria phage LP-064, complete genome	116590-116619	2	0.933
NZ_CP019615_1	1.23\|273878\|30\|NZ_CP019615\|CRISPRCasFinder,CRT,PILER-CR	273878-273907	30	JX126918	Listeria phage LP-125, complete genome	116592-116621	2	0.933
NZ_CP019615_1	1.3\|272557\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	272557-272586	30	NC_021787	Listeria phage LP-037, complete genome	3102-3131	3	0.9
NZ_CP019615_1	1.3\|272557\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	272557-272586	30	JX442241	Listeria phage P70, complete genome	52353-52382	3	0.9
NZ_CP019615_1	1.4\|272623\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	272623-272652	30	JB137888	Sequence 7 from Patent WO2012159774	1800-1829	3	0.9
NZ_CP019615_1	1.13\|273218\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	273218-273247	30	NC_003216	Listeria phage A118, complete genome	1777-1806	3	0.9
NZ_CP019615_1	1.13\|273218\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	273218-273247	30	AJ242593	Bacteriophage A118 complete genome	1777-1806	3	0.9
NZ_CP019615_1	1.13\|273218\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	273218-273247	30	KJ094022	Listeria phage LP-030-3, complete genome	10201-10230	3	0.9
NZ_CP019615_1	1.38\|274868\|30\|NZ_CP019615\|CRISPRCasFinder,CRT,PILER-CR	274868-274897	30	DQ003637	Listeria phage A500, complete genome	11342-11371	3	0.9
NZ_CP019615_1	1.38\|274868\|30\|NZ_CP019615\|CRISPRCasFinder,CRT,PILER-CR	274868-274897	30	KP399678	Listeria phage vB_LmoS_293, complete genome	11363-11392	3	0.9
NZ_CP019615_1	1.13\|273218\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	273218-273247	30	MK448834	Streptococcus phage Javan91, complete genome	17230-17259	4	0.867
NZ_CP019615_1	1.13\|273218\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	273218-273247	30	MK449009	Streptococcus phage Javan88, complete genome	18934-18963	4	0.867
NZ_CP019615_1	1.38\|274868\|30\|NZ_CP019615\|CRISPRCasFinder,CRT,PILER-CR	274868-274897	30	MH341452	Listeria phage PSU-VKH-LP040, complete genome	11377-11406	4	0.867
NZ_CP019615_1	1.22\|273812\|30\|NZ_CP019615\|CRISPRCasFinder,CRT,PILER-CR	273812-273841	30	NC_015603	Lactobacillus kefiranofaciens ZW3 plasmid pWW2, complete sequence	32398-32427	5	0.833
NZ_CP019615_1	1.32\|274472\|30\|NZ_CP019615\|CRISPRCasFinder,CRT,PILER-CR	274472-274501	30	MN855637	Bacteriophage sp. isolate 32, complete genome	31104-31133	5	0.833
NZ_CP019615_1	1.5\|272689\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	272689-272718	30	NZ_CP014688	Acetobacter persici strain TMW2.1084 plasmid pAC1084_1, complete sequence	320028-320057	6	0.8
NZ_CP019615_1	1.12\|273152\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	273152-273181	30	NC_027341	Lactococcus phage WRP3, complete genome	17007-17036	6	0.8
NZ_CP019615_1	1.12\|273152\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	273152-273181	30	KF926093	Lactococcus phage phiL47, complete genome	18163-18192	6	0.8
NZ_CP019615_1	1.12\|273152\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	273152-273181	30	NZ_CP031267	Staphylococcus warneri strain 16A plasmid unnamed3	9937-9966	6	0.8
NZ_CP019615_1	1.12\|273152\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	273152-273181	30	NZ_CP031267	Staphylococcus warneri strain 16A plasmid unnamed3	20386-20415	6	0.8
NZ_CP019615_1	1.12\|273152\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	273152-273181	30	NZ_CP031267	Staphylococcus warneri strain 16A plasmid unnamed3	88820-88849	6	0.8
NZ_CP019615_1	1.12\|273152\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	273152-273181	30	NZ_CP031267	Staphylococcus warneri strain 16A plasmid unnamed3	99301-99330	6	0.8
NZ_CP019615_1	1.13\|273218\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	273218-273247	30	MK448727	Streptococcus phage Javan291, complete genome	17813-17842	6	0.8
NZ_CP019615_1	1.22\|273812\|30\|NZ_CP019615\|CRISPRCasFinder,CRT,PILER-CR	273812-273841	30	MN693465	Marine virus AFVG_25M405, complete genome	34057-34086	6	0.8
NZ_CP019615_1	1.26\|274076\|30\|NZ_CP019615\|CRISPRCasFinder,CRT,PILER-CR	274076-274105	30	MN694095	Marine virus AFVG_250M410, complete genome	46513-46542	6	0.8
NZ_CP019615_1	1.31\|274406\|30\|NZ_CP019615\|CRISPRCasFinder,CRT,PILER-CR	274406-274435	30	AM157364	Bacteriophage P2-EC5 proviral ORF555 and ORF333 DNA for hypothetical proteins	443-472	6	0.8
NZ_CP019615_1	1.33\|274538\|30\|NZ_CP019615\|CRISPRCasFinder,CRT,PILER-CR	274538-274567	30	NZ_CP035190	Bacillus licheniformis strain SRCM103914 plasmid unnamed2, complete sequence	3161-3190	6	0.8
NZ_CP019615_1	1.2\|272491\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	272491-272520	30	MN692977	Marine virus AFVG_117M37, complete genome	16028-16057	7	0.767
NZ_CP019615_1	1.6\|272755\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	272755-272784	30	NZ_CP019429	Pseudomonas sp. R76 plasmid p76, complete sequence	6120-6149	7	0.767
NZ_CP019615_1	1.6\|272755\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	272755-272784	30	NZ_CP044458	Acinetobacter indicus strain B18 plasmid pB18-3, complete sequence	63045-63074	7	0.767
NZ_CP019615_1	1.6\|272755\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	272755-272784	30	NZ_CP039144	Acinetobacter sp. 10FS3-1 plasmid p10FS3-1-1, complete sequence	119931-119960	7	0.767
NZ_CP019615_1	1.12\|273152\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	273152-273181	30	CP003671	Staphylococcus warneri SG1 plasmid clone pvSw2 genomic sequence	6166-6195	7	0.767
NZ_CP019615_1	1.12\|273152\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	273152-273181	30	ACSJ01000014	Clostridium phage D-1873 CLG.Contig159, whole genome shotgun sequence	2930-2959	7	0.767
NZ_CP019615_1	1.12\|273152\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	273152-273181	30	NC_007581	Clostridium phage c-st, complete genome	26984-27013	7	0.767
NZ_CP019615_1	1.12\|273152\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	273152-273181	30	AP008983	Clostridium phage c-st genomic DNA, complete genome	26984-27013	7	0.767
NZ_CP019615_1	1.18\|273548\|30\|NZ_CP019615\|CRISPRCasFinder,CRT,PILER-CR	273548-273577	30	MN592897	Vibrio phage MZH0603, complete genome	34687-34716	7	0.767
NZ_CP019615_1	1.19\|273614\|30\|NZ_CP019615\|CRISPRCasFinder,CRT,PILER-CR	273614-273643	30	NC_015057	Granulicella tundricola MP5ACTX9 plasmid pACIX901, complete sequence	23801-23830	7	0.767
NZ_CP019615_1	1.19\|273614\|30\|NZ_CP019615\|CRISPRCasFinder,CRT,PILER-CR	273614-273643	30	NZ_CP045274	Bacillus megaterium strain FDU301 plasmid pFDU301B, complete sequence	111715-111744	7	0.767
NZ_CP019615_1	1.19\|273614\|30\|NZ_CP019615\|CRISPRCasFinder,CRT,PILER-CR	273614-273643	30	NZ_CP032534	Bacillus megaterium NCT-2 plasmid pNCT2_6, complete sequence	54169-54198	7	0.767
NZ_CP019615_1	1.22\|273812\|30\|NZ_CP019615\|CRISPRCasFinder,CRT,PILER-CR	273812-273841	30	NC_019773	Anabaena cylindrica PCC 7122 plasmid pANACY.03, complete sequence	115906-115935	7	0.767
NZ_CP019615_1	1.22\|273812\|30\|NZ_CP019615\|CRISPRCasFinder,CRT,PILER-CR	273812-273841	30	NZ_CP054832	Staphylococcus saprophyticus strain UTI-045 plasmid pUTI-045-1, complete sequence	47262-47291	7	0.767
NZ_CP019615_1	1.22\|273812\|30\|NZ_CP019615\|CRISPRCasFinder,CRT,PILER-CR	273812-273841	30	NZ_CP017467	Staphylococcus nepalensis strain JS11 plasmid pSNJS1101, complete sequence	8021-8050	7	0.767
NZ_CP019615_1	1.26\|274076\|30\|NZ_CP019615\|CRISPRCasFinder,CRT,PILER-CR	274076-274105	30	M72412	Bacillus amyloliquefaciens phage H2 5C-DNA methyltransferase gene, complete cds	1412-1441	7	0.767
NZ_CP019615_1	1.27\|274142\|30\|NZ_CP019615\|CRISPRCasFinder,CRT,PILER-CR	274142-274171	30	NZ_CP021032	Rhizobium sp. NXC14 plasmid pRspNXC14b, complete sequence	391875-391904	7	0.767
NZ_CP019615_1	1.32\|274472\|30\|NZ_CP019615\|CRISPRCasFinder,CRT,PILER-CR	274472-274501	30	MK448921	Streptococcus phage Javan374, complete genome	9999-10028	7	0.767
NZ_CP019615_1	1.32\|274472\|30\|NZ_CP019615\|CRISPRCasFinder,CRT,PILER-CR	274472-274501	30	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	3834600-3834629	7	0.767
NZ_CP019615_1	1.34\|274604\|30\|NZ_CP019615\|CRISPRCasFinder,CRT,PILER-CR	274604-274633	30	NZ_CP020328	Paenibacillus larvae subsp. pulvifaciens strain CCM 38 plasmid pPLP1, complete sequence	13523-13552	7	0.767
NZ_CP019615_1	1.34\|274604\|30\|NZ_CP019615\|CRISPRCasFinder,CRT,PILER-CR	274604-274633	30	NZ_CP019795	Paenibacillus larvae subsp. pulvifaciens strain ATCC 13537 plasmid pPLP1, complete sequence	55447-55476	7	0.767
NZ_CP019615_1	1.34\|274604\|30\|NZ_CP019615\|CRISPRCasFinder,CRT,PILER-CR	274604-274633	30	NZ_CP019660	Paenibacillus larvae subsp. larvae strain Eric_IV plasmid unnamed1, complete sequence	19503-19532	7	0.767
NZ_CP019615_1	1.34\|274604\|30\|NZ_CP019615\|CRISPRCasFinder,CRT,PILER-CR	274604-274633	30	NZ_CP019657	Paenibacillus larvae subsp. larvae strain Eric_III plasmid unnamed2, complete sequence	19503-19532	7	0.767
NZ_CP019615_1	1.37\|274802\|30\|NZ_CP019615\|CRISPRCasFinder,CRT,PILER-CR	274802-274831	30	MH358458	Escherichia phage phi G17, complete genome	44733-44762	7	0.767
NZ_CP019615_1	1.39\|274934\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	274934-274963	30	MN956514	Salmonella phage L6jm, complete genome	35199-35228	7	0.767
NZ_CP019615_1	1.5\|272689\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	272689-272718	30	KY794642	Staphylococcus phage vB_Sau_Clo6, complete genome	99049-99078	8	0.733
NZ_CP019615_1	1.6\|272755\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	272755-272784	30	LC425518	Uncultured phage DNA, contig: NODE577	9459-9488	8	0.733
NZ_CP019615_1	1.8\|272887\|31\|NZ_CP019615\|CRISPRCasFinder,CRT	272887-272917	31	KP054477	Lactobacillus phage LfeInf, complete genome	32822-32852	8	0.742
NZ_CP019615_1	1.11\|273086\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	273086-273115	30	MN693719	Marine virus AFVG_250M1014, complete genome	5373-5402	8	0.733
NZ_CP019615_1	1.11\|273086\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	273086-273115	30	NZ_CP014361	Methylomonas sp. DH-1 plasmid, complete sequence	82037-82066	8	0.733
NZ_CP019615_1	1.12\|273152\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	273152-273181	30	NZ_CP031069	Bacillus sp. JAS24-2 plasmid pl626, complete sequence	89650-89679	8	0.733
NZ_CP019615_1	1.12\|273152\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	273152-273181	30	NZ_CP010578	Bacillus thuringiensis serovar morrisoni strain BGSC 4AA1 plasmid pBMB232, complete sequence	26190-26219	8	0.733
NZ_CP019615_1	1.12\|273152\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	273152-273181	30	NZ_CP010579	Bacillus thuringiensis serovar morrisoni strain BGSC 4AA1 plasmid pBMB92, complete sequence	54428-54457	8	0.733
NZ_CP019615_1	1.12\|273152\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	273152-273181	30	NZ_CP020005	Bacillus thuringiensis strain Bacillus thuringiensis L-7601 plasmid unnamed3, complete sequence	142875-142904	8	0.733
NZ_CP019615_1	1.12\|273152\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	273152-273181	30	NZ_CP015177	Bacillus thuringiensis serovar alesti strain BGSC 4C1 plasmid pBMB267, complete sequence	65799-65828	8	0.733
NZ_CP019615_1	1.12\|273152\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	273152-273181	30	NZ_CP022446	Bacillus cereus C1L plasmid pC1L1, complete sequence	503758-503787	8	0.733
NZ_CP019615_1	1.12\|273152\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	273152-273181	30	NZ_CP044979	Bacillus thuringiensis strain BT62 plasmid pBT62A, complete sequence	422300-422329	8	0.733
NZ_CP019615_1	1.12\|273152\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	273152-273181	30	NZ_CP044980	Bacillus thuringiensis strain BT62 plasmid pBT62B, complete sequence	51993-52022	8	0.733
NZ_CP019615_1	1.12\|273152\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	273152-273181	30	NZ_CP010111	Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-5, complete sequence	223589-223618	8	0.733
NZ_CP019615_1	1.12\|273152\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	273152-273181	30	NZ_CP053953	Bacillus cereus strain FDAARGOS_798 plasmid unnamed2, complete sequence	294907-294936	8	0.733
NZ_CP019615_1	1.12\|273152\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	273152-273181	30	NZ_CP014853	Bacillus thuringiensis strain HD12 plasmid pHD120345, complete sequence	16209-16238	8	0.733
NZ_CP019615_1	1.12\|273152\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	273152-273181	30	NZ_CP011154	Bacillus cereus strain CMCC P0011 plasmid pRML05, complete sequence	395528-395557	8	0.733
NZ_CP019615_1	1.12\|273152\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	273152-273181	30	NZ_CP011152	Bacillus cereus strain CMCC P0021 plasmid pRML04, complete sequence	151358-151387	8	0.733
NZ_CP019615_1	1.12\|273152\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	273152-273181	30	NZ_CP045607	Bacillus cereus strain SB1 plasmid p1, complete sequence	455414-455443	8	0.733
NZ_CP019615_1	1.12\|273152\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	273152-273181	30	NZ_CP009636	Bacillus cereus 03BB108 plasmid pBFI_2, complete sequence	171890-171919	8	0.733
NZ_CP019615_1	1.12\|273152\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	273152-273181	30	NZ_CP016589	Bacillus thuringiensis strain KNU-07 plasmid pBTKNU07-01, complete sequence	43796-43825	8	0.733
NZ_CP019615_1	1.12\|273152\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	273152-273181	30	NZ_CP053657	Bacillus cereus strain CTMA_1571 plasmid p.1, complete sequence	406271-406300	8	0.733
NZ_CP019615_1	1.12\|273152\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	273152-273181	30	NZ_CP053962	Bacillus cereus strain FDAARGOS_802 plasmid unnamed2, complete sequence	236266-236295	8	0.733
NZ_CP019615_1	1.12\|273152\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	273152-273181	30	NZ_CP053950	Bacillus cereus strain FDAARGOS_799 plasmid unnamed2, complete sequence	189154-189183	8	0.733
NZ_CP019615_1	1.12\|273152\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	273152-273181	30	LC494302	Escherichia phage SP27 DNA, complete genome	6031-6060	8	0.733
NZ_CP019615_1	1.12\|273152\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	273152-273181	30	MK817115	Escherichia phage vB_EcoM_phAPEC6, complete genome	123356-123385	8	0.733
NZ_CP019615_1	1.12\|273152\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	273152-273181	30	NC_027364	Escherichia phage PBECO 4, complete genome	278627-278656	8	0.733
NZ_CP019615_1	1.12\|273152\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	273152-273181	30	MH383160	Escherichia phage UB, complete genome	343694-343723	8	0.733
NZ_CP019615_1	1.12\|273152\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	273152-273181	30	MK327931	Escherichia phage vB_EcoM_G17, complete genome	148842-148871	8	0.733
NZ_CP019615_1	1.12\|273152\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	273152-273181	30	MT325768	Psychrobacillus phage Perkons, complete genome	10133-10162	8	0.733
NZ_CP019615_1	1.12\|273152\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	273152-273181	30	LT603033	Escherichia phage vB_Eco_slurp01 genome assembly, chromosome: I	294515-294544	8	0.733
NZ_CP019615_1	1.12\|273152\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	273152-273181	30	KM507819	Escherichia phage 121Q, complete genome	6031-6060	8	0.733
NZ_CP019615_1	1.13\|273218\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	273218-273247	30	JX094500	Cronobacter phage CR5, complete genome	159870-159899	8	0.733
NZ_CP019615_1	1.22\|273812\|30\|NZ_CP019615\|CRISPRCasFinder,CRT,PILER-CR	273812-273841	30	NZ_CP040856	Lactobacillus johnsonii strain G2A plasmid unnamed2, complete sequence	24752-24781	8	0.733
NZ_CP019615_1	1.33\|274538\|30\|NZ_CP019615\|CRISPRCasFinder,CRT,PILER-CR	274538-274567	30	KT160311	Vibrio phage H188, complete genome	39404-39433	8	0.733
NZ_CP019615_1	1.36\|274736\|30\|NZ_CP019615\|CRISPRCasFinder,CRT,PILER-CR	274736-274765	30	NZ_CP044096	Streptococcus pyogenes strain FDAARGOS_668 plasmid unnamed3	439-468	8	0.733
NZ_CP019615_1	1.12\|273152\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	273152-273181	30	MK770119	Pantoea phage vB_PagS_AAS21, complete genome	71650-71679	9	0.7
NZ_CP019615_1	1.12\|273152\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	273152-273181	30	MG983742	Bacillus phage Anath, complete genome	38218-38247	9	0.7
NZ_CP019615_1	1.32\|274472\|30\|NZ_CP019615\|CRISPRCasFinder,CRT,PILER-CR	274472-274501	30	NC_012858	Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132502, complete sequence	613635-613664	9	0.7
NZ_CP019615_1	1.12\|273152\|30\|NZ_CP019615\|CRISPRCasFinder,CRT	273152-273181	30	MK448884	Streptococcus phage Javan246, complete genome	6318-6347	10	0.667

1. spacer 1.13|273218|30|NZ_CP019615|CRISPRCasFinder,CRT matches to KP399678 (Listeria phage vB_LmoS_293, complete genome) position: , mismatch: 0, identity: 1.0

gcacgtatgatcgtcttctttgatgacctc	CRISPR spacer
gcacgtatgatcgtcttctttgatgacctc	Protospacer
******************************

2. spacer 1.17|273482|30|NZ_CP019615|CRISPRCasFinder,CRT,PILER-CR matches to KP399678 (Listeria phage vB_LmoS_293, complete genome) position: , mismatch: 0, identity: 1.0

ttttctttttcacgatgcgatcgaacgttt	CRISPR spacer
ttttctttttcacgatgcgatcgaacgttt	Protospacer
******************************

3. spacer 1.22|273812|30|NZ_CP019615|CRISPRCasFinder,CRT,PILER-CR matches to MH341453 (Listeria phage PSU-VKH-LP041, complete genome) position: , mismatch: 0, identity: 1.0

taataaacaagaaatattacttcatgaatc	CRISPR spacer
taataaacaagaaatattacttcatgaatc	Protospacer
******************************

4. spacer 1.24|273944|30|NZ_CP019615|CRISPRCasFinder,CRT,PILER-CR matches to MH341452 (Listeria phage PSU-VKH-LP040, complete genome) position: , mismatch: 0, identity: 1.0

gtaatcccaattaaccccgcagagggtgta	CRISPR spacer
gtaatcccaattaaccccgcagagggtgta	Protospacer
******************************

5. spacer 1.24|273944|30|NZ_CP019615|CRISPRCasFinder,CRT,PILER-CR matches to KJ094022 (Listeria phage LP-030-3, complete genome) position: , mismatch: 0, identity: 1.0

gtaatcccaattaaccccgcagagggtgta	CRISPR spacer
gtaatcccaattaaccccgcagagggtgta	Protospacer
******************************

6. spacer 1.24|273944|30|NZ_CP019615|CRISPRCasFinder,CRT,PILER-CR matches to KP399678 (Listeria phage vB_LmoS_293, complete genome) position: , mismatch: 0, identity: 1.0

gtaatcccaattaaccccgcagagggtgta	CRISPR spacer
gtaatcccaattaaccccgcagagggtgta	Protospacer
******************************

7. spacer 1.25|274010|30|NZ_CP019615|CRISPRCasFinder,CRT,PILER-CR matches to KJ094023 (Listeria phage LP-101, complete genome) position: , mismatch: 0, identity: 1.0

tgtcatggcgaaaggtaaaacggtcgattg	CRISPR spacer
tgtcatggcgaaaggtaaaacggtcgattg	Protospacer
******************************

8. spacer 1.30|274340|30|NZ_CP019615|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR134403 (Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence) position: , mismatch: 0, identity: 1.0

catcgaattgatacttttcgagtgaagcaa	CRISPR spacer
catcgaattgatacttttcgagtgaagcaa	Protospacer
******************************

9. spacer 1.30|274340|30|NZ_CP019615|CRISPRCasFinder,CRT,PILER-CR matches to AJ312240 (Bacteriophage PSA complete genome) position: , mismatch: 0, identity: 1.0

catcgaattgatacttttcgagtgaagcaa	CRISPR spacer
catcgaattgatacttttcgagtgaagcaa	Protospacer
******************************

10. spacer 1.30|274340|30|NZ_CP019615|CRISPRCasFinder,CRT,PILER-CR matches to KJ094023 (Listeria phage LP-101, complete genome) position: , mismatch: 0, identity: 1.0

catcgaattgatacttttcgagtgaagcaa	CRISPR spacer
catcgaattgatacttttcgagtgaagcaa	Protospacer
******************************

11. spacer 1.34|274604|30|NZ_CP019615|CRISPRCasFinder,CRT,PILER-CR matches to MH341452 (Listeria phage PSU-VKH-LP040, complete genome) position: , mismatch: 0, identity: 1.0

tttataaagaatacttgcggggcataaatg	CRISPR spacer
tttataaagaatacttgcggggcataaatg	Protospacer
******************************

12. spacer 1.34|274604|30|NZ_CP019615|CRISPRCasFinder,CRT,PILER-CR matches to DQ003637 (Listeria phage A500, complete genome) position: , mismatch: 0, identity: 1.0

tttataaagaatacttgcggggcataaatg	CRISPR spacer
tttataaagaatacttgcggggcataaatg	Protospacer
******************************

13. spacer 1.34|274604|30|NZ_CP019615|CRISPRCasFinder,CRT,PILER-CR matches to KJ094022 (Listeria phage LP-030-3, complete genome) position: , mismatch: 0, identity: 1.0

tttataaagaatacttgcggggcataaatg	CRISPR spacer
tttataaagaatacttgcggggcataaatg	Protospacer
******************************

14. spacer 1.34|274604|30|NZ_CP019615|CRISPRCasFinder,CRT,PILER-CR matches to KP399678 (Listeria phage vB_LmoS_293, complete genome) position: , mismatch: 0, identity: 1.0

tttataaagaatacttgcggggcataaatg	CRISPR spacer
tttataaagaatacttgcggggcataaatg	Protospacer
******************************

15. spacer 1.13|273218|30|NZ_CP019615|CRISPRCasFinder,CRT matches to MH341452 (Listeria phage PSU-VKH-LP040, complete genome) position: , mismatch: 1, identity: 0.967

gcacgtatgatcgtcttctttgatgacctc	CRISPR spacer
acacgtatgatcgtcttctttgatgacctc	Protospacer
.*****************************

16. spacer 1.13|273218|30|NZ_CP019615|CRISPRCasFinder,CRT matches to DQ003637 (Listeria phage A500, complete genome) position: , mismatch: 1, identity: 0.967

gcacgtatgatcgtcttctttgatgacctc	CRISPR spacer
acacgtatgatcgtcttctttgatgacctc	Protospacer
.*****************************

17. spacer 1.14|273284|30|NZ_CP019615|CRISPRCasFinder,CRT matches to MN172529 (Listeria phage LP-039, complete genome) position: , mismatch: 1, identity: 0.967

tactcgtataaaaatcaagagagacgtatt	CRISPR spacer
tactggtataaaaatcaagagagacgtatt	Protospacer
**** *************************

18. spacer 1.14|273284|30|NZ_CP019615|CRISPRCasFinder,CRT matches to MT438761 (Listeria virus P61, complete genome) position: , mismatch: 1, identity: 0.967

tactcgtataaaaatcaagagagacgtatt	CRISPR spacer
tactggtataaaaatcaagagagacgtatt	Protospacer
**** *************************

19. spacer 1.14|273284|30|NZ_CP019615|CRISPRCasFinder,CRT matches to MT178766 (Listeria virus P100plus, complete genome) position: , mismatch: 1, identity: 0.967

tactcgtataaaaatcaagagagacgtatt	CRISPR spacer
tactggtataaaaatcaagagagacgtatt	Protospacer
**** *************************

20. spacer 1.14|273284|30|NZ_CP019615|CRISPRCasFinder,CRT matches to NC_025440 (Listeria phage WIL-1, complete genome) position: , mismatch: 1, identity: 0.967

tactcgtataaaaatcaagagagacgtatt	CRISPR spacer
tactggtataaaaatcaagagagacgtatt	Protospacer
**** *************************

21. spacer 1.14|273284|30|NZ_CP019615|CRISPRCasFinder,CRT matches to NC_047872 (Listeria phage LMTA-94, complete genome) position: , mismatch: 1, identity: 0.967

tactcgtataaaaatcaagagagacgtatt	CRISPR spacer
tactggtataaaaatcaagagagacgtatt	Protospacer
**** *************************

22. spacer 1.14|273284|30|NZ_CP019615|CRISPRCasFinder,CRT matches to DQ003638 (Listeria phage A511, complete genome) position: , mismatch: 1, identity: 0.967

tactcgtataaaaatcaagagagacgtatt	CRISPR spacer
tactggtataaaaatcaagagagacgtatt	Protospacer
**** *************************

23. spacer 1.14|273284|30|NZ_CP019615|CRISPRCasFinder,CRT matches to MT178767 (Listeria virus P200, complete genome) position: , mismatch: 1, identity: 0.967

tactcgtataaaaatcaagagagacgtatt	CRISPR spacer
tactggtataaaaatcaagagagacgtatt	Protospacer
**** *************************

24. spacer 1.14|273284|30|NZ_CP019615|CRISPRCasFinder,CRT matches to DQ004855 (Listeria bacteriophage P100, complete genome) position: , mismatch: 1, identity: 0.967

tactcgtataaaaatcaagagagacgtatt	CRISPR spacer
tactggtataaaaatcaagagagacgtatt	Protospacer
**** *************************

25. spacer 1.14|273284|30|NZ_CP019615|CRISPRCasFinder,CRT matches to KJ591604 (Listeria phage LMTA-148, complete genome) position: , mismatch: 1, identity: 0.967

tactcgtataaaaatcaagagagacgtatt	CRISPR spacer
tactggtataaaaatcaagagagacgtatt	Protospacer
**** *************************

26. spacer 1.14|273284|30|NZ_CP019615|CRISPRCasFinder,CRT matches to KJ591605 (Listeria phage LMTA-57, complete genome) position: , mismatch: 1, identity: 0.967

tactcgtataaaaatcaagagagacgtatt	CRISPR spacer
tactggtataaaaatcaagagagacgtatt	Protospacer
**** *************************

27. spacer 1.14|273284|30|NZ_CP019615|CRISPRCasFinder,CRT matches to KJ094033 (Listeria phage LP-048, complete genome) position: , mismatch: 1, identity: 0.967

tactcgtataaaaatcaagagagacgtatt	CRISPR spacer
tactggtataaaaatcaagagagacgtatt	Protospacer
**** *************************

28. spacer 1.14|273284|30|NZ_CP019615|CRISPRCasFinder,CRT matches to KJ668715 (Listeria phage LMTA-34, partial genome) position: , mismatch: 1, identity: 0.967

tactcgtataaaaatcaagagagacgtatt	CRISPR spacer
tactggtataaaaatcaagagagacgtatt	Protospacer
**** *************************

29. spacer 1.14|273284|30|NZ_CP019615|CRISPRCasFinder,CRT matches to NC_042048 (Listeria phage LMTA-34, complete genome) position: , mismatch: 1, identity: 0.967

tactcgtataaaaatcaagagagacgtatt	CRISPR spacer
tactggtataaaaatcaagagagacgtatt	Protospacer
**** *************************

30. spacer 1.14|273284|30|NZ_CP019615|CRISPRCasFinder,CRT matches to MK792752 (UNVERIFIED: Listera phage vB-LmoM-SH3-3, complete genome) position: , mismatch: 1, identity: 0.967

tactcgtataaaaatcaagagagacgtatt	CRISPR spacer
tactggtataaaaatcaagagagacgtatt	Protospacer
**** *************************

31. spacer 1.14|273284|30|NZ_CP019615|CRISPRCasFinder,CRT matches to FJ147488 (Listeria phage 20422-1 terminase large subunit (terL) gene, partial cds; and unknown gene) position: , mismatch: 1, identity: 0.967

tactcgtataaaaatcaagagagacgtatt	CRISPR spacer
tactggtataaaaatcaagagagacgtatt	Protospacer
**** *************************

32. spacer 1.14|273284|30|NZ_CP019615|CRISPRCasFinder,CRT matches to NC_024360 (Listeria phage LMSP-25, complete genome) position: , mismatch: 1, identity: 0.967

tactcgtataaaaatcaagagagacgtatt	CRISPR spacer
tactggtataaaaatcaagagagacgtatt	Protospacer
**** *************************

33. spacer 1.14|273284|30|NZ_CP019615|CRISPRCasFinder,CRT matches to JQ797329 (Listeria phage vB_LmoM_AG20, complete genome) position: , mismatch: 1, identity: 0.967

tactcgtataaaaatcaagagagacgtatt	CRISPR spacer
tactggtataaaaatcaagagagacgtatt	Protospacer
**** *************************

34. spacer 1.14|273284|30|NZ_CP019615|CRISPRCasFinder,CRT matches to KJ535721 (Listeria phage List-36, complete genome) position: , mismatch: 1, identity: 0.967

tactcgtataaaaatcaagagagacgtatt	CRISPR spacer
tactggtataaaaatcaagagagacgtatt	Protospacer
**** *************************

35. spacer 1.17|273482|30|NZ_CP019615|CRISPRCasFinder,CRT,PILER-CR matches to DQ003637 (Listeria phage A500, complete genome) position: , mismatch: 1, identity: 0.967

ttttctttttcacgatgcgatcgaacgttt	CRISPR spacer
ttttctttttcacgatgcgatcaaacgttt	Protospacer
**********************.*******

36. spacer 1.17|273482|30|NZ_CP019615|CRISPRCasFinder,CRT,PILER-CR matches to KP399677 (Listeria phage vB_LmoS_188, complete genome) position: , mismatch: 1, identity: 0.967

ttttctttttcacgatgcgatcgaacgttt	CRISPR spacer
ttttctttttcacgatgcgatcaaacgttt	Protospacer
**********************.*******

37. spacer 1.17|273482|30|NZ_CP019615|CRISPRCasFinder,CRT,PILER-CR matches to KJ094022 (Listeria phage LP-030-3, complete genome) position: , mismatch: 1, identity: 0.967

ttttctttttcacgatgcgatcgaacgttt	CRISPR spacer
ttttctttttcacgatgcgatcaaacgttt	Protospacer
**********************.*******

38. spacer 1.23|273878|30|NZ_CP019615|CRISPRCasFinder,CRT,PILER-CR matches to MN172529 (Listeria phage LP-039, complete genome) position: , mismatch: 1, identity: 0.967

cactatccactacagtgatttgtattgtgc	CRISPR spacer
cactatccattacagtgatttgtattgtgc	Protospacer
*********.********************

39. spacer 1.23|273878|30|NZ_CP019615|CRISPRCasFinder,CRT,PILER-CR matches to MT438761 (Listeria virus P61, complete genome) position: , mismatch: 1, identity: 0.967

cactatccactacagtgatttgtattgtgc	CRISPR spacer
cactatccattacagtgatttgtattgtgc	Protospacer
*********.********************

40. spacer 1.23|273878|30|NZ_CP019615|CRISPRCasFinder,CRT,PILER-CR matches to MT668624 (Listeria phage LP-Mix_6.2, complete genome) position: , mismatch: 1, identity: 0.967

cactatccactacagtgatttgtattgtgc	CRISPR spacer
cactatccattacagtgatttgtattgtgc	Protospacer
*********.********************

41. spacer 1.23|273878|30|NZ_CP019615|CRISPRCasFinder,CRT,PILER-CR matches to MT178766 (Listeria virus P100plus, complete genome) position: , mismatch: 1, identity: 0.967

cactatccactacagtgatttgtattgtgc	CRISPR spacer
cactatccattacagtgatttgtattgtgc	Protospacer
*********.********************

42. spacer 1.23|273878|30|NZ_CP019615|CRISPRCasFinder,CRT,PILER-CR matches to NC_025440 (Listeria phage WIL-1, complete genome) position: , mismatch: 1, identity: 0.967

cactatccactacagtgatttgtattgtgc	CRISPR spacer
cactatccattacagtgatttgtattgtgc	Protospacer
*********.********************

43. spacer 1.23|273878|30|NZ_CP019615|CRISPRCasFinder,CRT,PILER-CR matches to NC_047872 (Listeria phage LMTA-94, complete genome) position: , mismatch: 1, identity: 0.967

cactatccactacagtgatttgtattgtgc	CRISPR spacer
cactatccattacagtgatttgtattgtgc	Protospacer
*********.********************

44. spacer 1.23|273878|30|NZ_CP019615|CRISPRCasFinder,CRT,PILER-CR matches to DQ003638 (Listeria phage A511, complete genome) position: , mismatch: 1, identity: 0.967

cactatccactacagtgatttgtattgtgc	CRISPR spacer
cactatccattacagtgatttgtattgtgc	Protospacer
*********.********************

45. spacer 1.23|273878|30|NZ_CP019615|CRISPRCasFinder,CRT,PILER-CR matches to MT178767 (Listeria virus P200, complete genome) position: , mismatch: 1, identity: 0.967

cactatccactacagtgatttgtattgtgc	CRISPR spacer
cactatccattacagtgatttgtattgtgc	Protospacer
*********.********************

46. spacer 1.23|273878|30|NZ_CP019615|CRISPRCasFinder,CRT,PILER-CR matches to DQ004855 (Listeria bacteriophage P100, complete genome) position: , mismatch: 1, identity: 0.967

cactatccactacagtgatttgtattgtgc	CRISPR spacer
cactatccattacagtgatttgtattgtgc	Protospacer
*********.********************

47. spacer 1.23|273878|30|NZ_CP019615|CRISPRCasFinder,CRT,PILER-CR matches to KJ591604 (Listeria phage LMTA-148, complete genome) position: , mismatch: 1, identity: 0.967

cactatccactacagtgatttgtattgtgc	CRISPR spacer
cactatccattacagtgatttgtattgtgc	Protospacer
*********.********************

48. spacer 1.23|273878|30|NZ_CP019615|CRISPRCasFinder,CRT,PILER-CR matches to KJ591605 (Listeria phage LMTA-57, complete genome) position: , mismatch: 1, identity: 0.967

cactatccactacagtgatttgtattgtgc	CRISPR spacer
cactatccattacagtgatttgtattgtgc	Protospacer
*********.********************

49. spacer 1.23|273878|30|NZ_CP019615|CRISPRCasFinder,CRT,PILER-CR matches to KJ094033 (Listeria phage LP-048, complete genome) position: , mismatch: 1, identity: 0.967

cactatccactacagtgatttgtattgtgc	CRISPR spacer
cactatccattacagtgatttgtattgtgc	Protospacer
*********.********************

50. spacer 1.23|273878|30|NZ_CP019615|CRISPRCasFinder,CRT,PILER-CR matches to KJ668715 (Listeria phage LMTA-34, partial genome) position: , mismatch: 1, identity: 0.967

cactatccactacagtgatttgtattgtgc	CRISPR spacer
cactatccattacagtgatttgtattgtgc	Protospacer
*********.********************

51. spacer 1.23|273878|30|NZ_CP019615|CRISPRCasFinder,CRT,PILER-CR matches to MN128594 (Listeria phage LP-066, complete genome) position: , mismatch: 1, identity: 0.967

cactatccactacagtgatttgtattgtgc	CRISPR spacer
cactatccattacagtgatttgtattgtgc	Protospacer
*********.********************

52. spacer 1.23|273878|30|NZ_CP019615|CRISPRCasFinder,CRT,PILER-CR matches to NC_042048 (Listeria phage LMTA-34, complete genome) position: , mismatch: 1, identity: 0.967

cactatccactacagtgatttgtattgtgc	CRISPR spacer
cactatccattacagtgatttgtattgtgc	Protospacer
*********.********************

53. spacer 1.23|273878|30|NZ_CP019615|CRISPRCasFinder,CRT,PILER-CR matches to MK792752 (UNVERIFIED: Listera phage vB-LmoM-SH3-3, complete genome) position: , mismatch: 1, identity: 0.967

cactatccactacagtgatttgtattgtgc	CRISPR spacer
cactatccattacagtgatttgtattgtgc	Protospacer
*********.********************

54. spacer 1.23|273878|30|NZ_CP019615|CRISPRCasFinder,CRT,PILER-CR matches to KJ094030 (Listeria phage LP-083-2, complete genome) position: , mismatch: 1, identity: 0.967

cactatccactacagtgatttgtattgtgc	CRISPR spacer
cactatccattacagtgatttgtattgtgc	Protospacer
*********.********************

55. spacer 1.23|273878|30|NZ_CP019615|CRISPRCasFinder,CRT,PILER-CR matches to NC_024360 (Listeria phage LMSP-25, complete genome) position: , mismatch: 1, identity: 0.967

cactatccactacagtgatttgtattgtgc	CRISPR spacer
cactatccattacagtgatttgtattgtgc	Protospacer
*********.********************

56. spacer 1.23|273878|30|NZ_CP019615|CRISPRCasFinder,CRT,PILER-CR matches to JQ797329 (Listeria phage vB_LmoM_AG20, complete genome) position: , mismatch: 1, identity: 0.967

cactatccactacagtgatttgtattgtgc	CRISPR spacer
cactatccattacagtgatttgtattgtgc	Protospacer
*********.********************

57. spacer 1.23|273878|30|NZ_CP019615|CRISPRCasFinder,CRT,PILER-CR matches to KJ535721 (Listeria phage List-36, complete genome) position: , mismatch: 1, identity: 0.967

cactatccactacagtgatttgtattgtgc	CRISPR spacer
cactatccattacagtgatttgtattgtgc	Protospacer
*********.********************

58. spacer 1.23|273878|30|NZ_CP019615|CRISPRCasFinder,CRT,PILER-CR matches to KJ094031 (Listeria phage LP-124, complete genome) position: , mismatch: 1, identity: 0.967

cactatccactacagtgatttgtattgtgc	CRISPR spacer
cactatccattacagtgatttgtattgtgc	Protospacer
*********.********************

59. spacer 1.25|274010|30|NZ_CP019615|CRISPRCasFinder,CRT,PILER-CR matches to NC_003216 (Listeria phage A118, complete genome) position: , mismatch: 1, identity: 0.967

tgtcatggcgaaaggtaaaacggtcgattg	CRISPR spacer
cgtcatggcgaaaggtaaaacggtcgattg	Protospacer
.*****************************

60. spacer 1.25|274010|30|NZ_CP019615|CRISPRCasFinder,CRT,PILER-CR matches to AJ242593 (Bacteriophage A118 complete genome) position: , mismatch: 1, identity: 0.967

tgtcatggcgaaaggtaaaacggtcgattg	CRISPR spacer
cgtcatggcgaaaggtaaaacggtcgattg	Protospacer
.*****************************

61. spacer 1.25|274010|30|NZ_CP019615|CRISPRCasFinder,CRT,PILER-CR matches to X85008 (Bacteriophage A118 hol118 and ply118 genes) position: , mismatch: 1, identity: 0.967

tgtcatggcgaaaggtaaaacggtcgattg	CRISPR spacer
cgtcatggcgaaaggtaaaacggtcgattg	Protospacer
.*****************************

62. spacer 1.27|274142|30|NZ_CP019615|CRISPRCasFinder,CRT,PILER-CR matches to KJ094027 (Listeria phage LP-083-1 contig 1, partial genome) position: , mismatch: 1, identity: 0.967

aacctgcaggtgctgtgttcacgtcagcaa	CRISPR spacer
aacccgcaggtgctgtgttcacgtcagcaa	Protospacer
****.*************************

63. spacer 1.27|274142|30|NZ_CP019615|CRISPRCasFinder,CRT,PILER-CR matches to DQ003641 (Listeria phage P35, complete genome) position: , mismatch: 1, identity: 0.967

aacctgcaggtgctgtgttcacgtcagcaa	CRISPR spacer
aacccgcaggtgctgtgttcacgtcagcaa	Protospacer
****.*************************

64. spacer 1.3|272557|30|NZ_CP019615|CRISPRCasFinder,CRT matches to JB137888 (Sequence 7 from Patent WO2012159774) position: , mismatch: 2, identity: 0.933

ctaaattcatgttgcgggatgttgtggatg	CRISPR spacer
ctaaattcatgttgcgagatgttgtggacg	Protospacer
****************.***********.*

65. spacer 1.3|272557|30|NZ_CP019615|CRISPRCasFinder,CRT matches to KJ094021 (Listeria phage LP-114, complete genome) position: , mismatch: 2, identity: 0.933

ctaaattcatgttgcgggatgttgtggatg	CRISPR spacer
ctaaattcatgttgcgggatgttgttgacg	Protospacer
************************* **.*

66. spacer 1.14|273284|30|NZ_CP019615|CRISPRCasFinder,CRT matches to MT668624 (Listeria phage LP-Mix_6.2, complete genome) position: , mismatch: 2, identity: 0.933

tactcgtataaaaatcaagagagacgtatt	CRISPR spacer
tactggtataaaaatcaagagagacatatt	Protospacer
**** ********************.****

67. spacer 1.14|273284|30|NZ_CP019615|CRISPRCasFinder,CRT matches to MN128594 (Listeria phage LP-066, complete genome) position: , mismatch: 2, identity: 0.933

tactcgtataaaaatcaagagagacgtatt	CRISPR spacer
tactggtataaaaatcaagagagacatatt	Protospacer
**** ********************.****

68. spacer 1.14|273284|30|NZ_CP019615|CRISPRCasFinder,CRT matches to NC_041862 (Listeria phage LP-064, complete genome) position: , mismatch: 2, identity: 0.933

tactcgtataaaaatcaagagagacgtatt	CRISPR spacer
tactggtataaaaatcaagagagacatatt	Protospacer
**** ********************.****

69. spacer 1.14|273284|30|NZ_CP019615|CRISPRCasFinder,CRT matches to KJ094030 (Listeria phage LP-083-2, complete genome) position: , mismatch: 2, identity: 0.933

tactcgtataaaaatcaagagagacgtatt	CRISPR spacer
tactggtataaaaatcaagagagacatatt	Protospacer
**** ********************.****

70. spacer 1.14|273284|30|NZ_CP019615|CRISPRCasFinder,CRT matches to JX126918 (Listeria phage LP-125, complete genome) position: , mismatch: 2, identity: 0.933

tactcgtataaaaatcaagagagacgtatt	CRISPR spacer
tactggtataaaaatcaagagagacatatt	Protospacer
**** ********************.****

71. spacer 1.14|273284|30|NZ_CP019615|CRISPRCasFinder,CRT matches to KJ094031 (Listeria phage LP-124, complete genome) position: , mismatch: 2, identity: 0.933

tactcgtataaaaatcaagagagacgtatt	CRISPR spacer
tactggtataaaaatcaagagagacatatt	Protospacer
**** ********************.****

72. spacer 1.15|273350|30|NZ_CP019615|CRISPRCasFinder,CRT,PILER-CR matches to KJ094028 (Listeria phage LP-083-1 contig 2, partial genome) position: , mismatch: 2, identity: 0.933

cttccgcgttacatgtttgacatcaagtaa	CRISPR spacer
attccgcgttacatgtttgacatcaagaaa	Protospacer
 ************************** **

73. spacer 1.15|273350|30|NZ_CP019615|CRISPRCasFinder,CRT,PILER-CR matches to DQ003641 (Listeria phage P35, complete genome) position: , mismatch: 2, identity: 0.933

cttccgcgttacatgtttgacatcaagtaa	CRISPR spacer
attccgcgttacatgtttgacatcaagaaa	Protospacer
 ************************** **

74. spacer 1.22|273812|30|NZ_CP019615|CRISPRCasFinder,CRT,PILER-CR matches to NC_009813 (Listeria phage B054, complete genome) position: , mismatch: 2, identity: 0.933

taataaacaagaaatattacttcatgaatc	CRISPR spacer
taataaacaagaaatattgcttcacgaatc	Protospacer
******************.*****.*****

75. spacer 1.23|273878|30|NZ_CP019615|CRISPRCasFinder,CRT,PILER-CR matches to NC_041862 (Listeria phage LP-064, complete genome) position: , mismatch: 2, identity: 0.933

cactatccactacagtgatttgtattgtgc	CRISPR spacer
cactatccattatagtgatttgtattgtgc	Protospacer
*********.**.*****************

76. spacer 1.23|273878|30|NZ_CP019615|CRISPRCasFinder,CRT,PILER-CR matches to JX126918 (Listeria phage LP-125, complete genome) position: , mismatch: 2, identity: 0.933

cactatccactacagtgatttgtattgtgc	CRISPR spacer
cactatccattatagtgatttgtattgtgc	Protospacer
*********.**.*****************

77. spacer 1.3|272557|30|NZ_CP019615|CRISPRCasFinder,CRT matches to NC_021787 (Listeria phage LP-037, complete genome) position: , mismatch: 3, identity: 0.9

ctaaattcatgttgcgggatgttgtggatg	CRISPR spacer
ctaaattcatgttgcgtgatgttgttgacg	Protospacer
**************** ******** **.*

78. spacer 1.3|272557|30|NZ_CP019615|CRISPRCasFinder,CRT matches to JX442241 (Listeria phage P70, complete genome) position: , mismatch: 3, identity: 0.9

ctaaattcatgttgcgggatgttgtggatg	CRISPR spacer
ctaaattcatgttgcgtgatgttgttgacg	Protospacer
**************** ******** **.*

79. spacer 1.4|272623|30|NZ_CP019615|CRISPRCasFinder,CRT matches to JB137888 (Sequence 7 from Patent WO2012159774) position: , mismatch: 3, identity: 0.9

gaacttcttcaccatccttcatttctgttt	CRISPR spacer
gtacttcttcgccatcctttatttctgttt	Protospacer
* ********.********.**********

80. spacer 1.13|273218|30|NZ_CP019615|CRISPRCasFinder,CRT matches to NC_003216 (Listeria phage A118, complete genome) position: , mismatch: 3, identity: 0.9

gcacgtatgatcgtcttctttgatgacctc	CRISPR spacer
acacgtatgatcgtcttctttgacgacttc	Protospacer
.**********************.***.**

81. spacer 1.13|273218|30|NZ_CP019615|CRISPRCasFinder,CRT matches to AJ242593 (Bacteriophage A118 complete genome) position: , mismatch: 3, identity: 0.9

gcacgtatgatcgtcttctttgatgacctc	CRISPR spacer
acacgtatgatcgtcttctttgacgacttc	Protospacer
.**********************.***.**

82. spacer 1.13|273218|30|NZ_CP019615|CRISPRCasFinder,CRT matches to KJ094022 (Listeria phage LP-030-3, complete genome) position: , mismatch: 3, identity: 0.9

gcacgtatgatcgtcttctttgatgacctc	CRISPR spacer
acacgtatgatcatcttctttgatgacttc	Protospacer
.***********.**************.**

83. spacer 1.38|274868|30|NZ_CP019615|CRISPRCasFinder,CRT,PILER-CR matches to DQ003637 (Listeria phage A500, complete genome) position: , mismatch: 3, identity: 0.9

tcaaagagtttatacctgttttgattgagt	CRISPR spacer
taaaagagtttatacctgttttaattgaat	Protospacer
* ********************.*****.*

84. spacer 1.38|274868|30|NZ_CP019615|CRISPRCasFinder,CRT,PILER-CR matches to KP399678 (Listeria phage vB_LmoS_293, complete genome) position: , mismatch: 3, identity: 0.9

tcaaagagtttatacctgttttgattgagt	CRISPR spacer
taaaagagtttatacctgttttaattgaat	Protospacer
* ********************.*****.*

85. spacer 1.13|273218|30|NZ_CP019615|CRISPRCasFinder,CRT matches to MK448834 (Streptococcus phage Javan91, complete genome) position: , mismatch: 4, identity: 0.867

gcacgtatgatcgtcttctttgatgacctc	CRISPR spacer
gcatgtatgatcatcttctttgatgacatt	Protospacer
***.********.************** *.

86. spacer 1.13|273218|30|NZ_CP019615|CRISPRCasFinder,CRT matches to MK449009 (Streptococcus phage Javan88, complete genome) position: , mismatch: 4, identity: 0.867

gcacgtatgatcgtcttctttgatgacctc	CRISPR spacer
gcatgtatgatcatcttctttgatgacatt	Protospacer
***.********.************** *.

87. spacer 1.38|274868|30|NZ_CP019615|CRISPRCasFinder,CRT,PILER-CR matches to MH341452 (Listeria phage PSU-VKH-LP040, complete genome) position: , mismatch: 4, identity: 0.867

tcaaagagtttatacctgttttgattgagt	CRISPR spacer
ttaaagagtttatacctgttttaatcgaat	Protospacer
*.********************.**.**.*

88. spacer 1.22|273812|30|NZ_CP019615|CRISPRCasFinder,CRT,PILER-CR matches to NC_015603 (Lactobacillus kefiranofaciens ZW3 plasmid pWW2, complete sequence) position: , mismatch: 5, identity: 0.833

taataaacaagaaatattact-tcatgaatc	CRISPR spacer
taataaataagaaatattactatcttcaaa-	Protospacer
*******.************* ** * **

89. spacer 1.32|274472|30|NZ_CP019615|CRISPRCasFinder,CRT,PILER-CR matches to MN855637 (Bacteriophage sp. isolate 32, complete genome) position: , mismatch: 5, identity: 0.833

gcatcgtaccccagttcatgaagcgcggta	CRISPR spacer
acatcgtaccccagttcatcaagcgtgttg	Protospacer
.****************** *****.* *.

90. spacer 1.5|272689|30|NZ_CP019615|CRISPRCasFinder,CRT matches to NZ_CP014688 (Acetobacter persici strain TMW2.1084 plasmid pAC1084_1, complete sequence) position: , mismatch: 6, identity: 0.8

tcagacttctatatccacaataaaagccct	CRISPR spacer
taacgcttctacatccacaaaaaaagccgt	Protospacer
* * .******.******** ******* *

91. spacer 1.12|273152|30|NZ_CP019615|CRISPRCasFinder,CRT matches to NC_027341 (Lactococcus phage WRP3, complete genome) position: , mismatch: 6, identity: 0.8

ttaatgaagaactagaaacaattgaaaaca	CRISPR spacer
caattgaagaacttgaaacaattcaaaata	Protospacer
. * ********* ********* ****.*

92. spacer 1.12|273152|30|NZ_CP019615|CRISPRCasFinder,CRT matches to KF926093 (Lactococcus phage phiL47, complete genome) position: , mismatch: 6, identity: 0.8

ttaatgaagaactagaaacaattgaaaaca	CRISPR spacer
caattgaagaacttgaaacaattcaaaata	Protospacer
. * ********* ********* ****.*

93. spacer 1.12|273152|30|NZ_CP019615|CRISPRCasFinder,CRT matches to NZ_CP031267 (Staphylococcus warneri strain 16A plasmid unnamed3) position: , mismatch: 6, identity: 0.8

ttaatgaagaactagaaacaattgaaaaca	CRISPR spacer
taattgaagaattagaaaaaattgaaataa	Protospacer
* * *******.****** ********  *

94. spacer 1.12|273152|30|NZ_CP019615|CRISPRCasFinder,CRT matches to NZ_CP031267 (Staphylococcus warneri strain 16A plasmid unnamed3) position: , mismatch: 6, identity: 0.8

ttaatgaagaactagaaacaattgaaaaca	CRISPR spacer
taattgaagaattagaaaaaattgaaataa	Protospacer
* * *******.****** ********  *

95. spacer 1.12|273152|30|NZ_CP019615|CRISPRCasFinder,CRT matches to NZ_CP031267 (Staphylococcus warneri strain 16A plasmid unnamed3) position: , mismatch: 6, identity: 0.8

ttaatgaagaactagaaacaattgaaaaca	CRISPR spacer
taattgaagaattagaaaaaattgaaataa	Protospacer
* * *******.****** ********  *

96. spacer 1.12|273152|30|NZ_CP019615|CRISPRCasFinder,CRT matches to NZ_CP031267 (Staphylococcus warneri strain 16A plasmid unnamed3) position: , mismatch: 6, identity: 0.8

ttaatgaagaactagaaacaattgaaaaca	CRISPR spacer
taattgaagaattagaaaaaattgaaataa	Protospacer
* * *******.****** ********  *

97. spacer 1.13|273218|30|NZ_CP019615|CRISPRCasFinder,CRT matches to MK448727 (Streptococcus phage Javan291, complete genome) position: , mismatch: 6, identity: 0.8

gcacgtatgatcgtcttctttgatgacctc	CRISPR spacer
gcacgtatgatcatcttctttcacaacttt	Protospacer
************.******** *..**.*.

98. spacer 1.22|273812|30|NZ_CP019615|CRISPRCasFinder,CRT,PILER-CR matches to MN693465 (Marine virus AFVG_25M405, complete genome) position: , mismatch: 6, identity: 0.8

taataa-acaagaaatattacttcatgaatc	CRISPR spacer
-atcaacacaagatgtattacttcatgaatg	Protospacer
 * .** ****** .***************

99. spacer 1.26|274076|30|NZ_CP019615|CRISPRCasFinder,CRT,PILER-CR matches to MN694095 (Marine virus AFVG_250M410, complete genome) position: , mismatch: 6, identity: 0.8

agtgttggagactgcaaggatttccggatt	CRISPR spacer
aatgcgagagactgcaaggatttccagatg	Protospacer
*.**. .******************.***

100. spacer 1.31|274406|30|NZ_CP019615|CRISPRCasFinder,CRT,PILER-CR matches to AM157364 (Bacteriophage P2-EC5 proviral ORF555 and ORF333 DNA for hypothetical proteins) position: , mismatch: 6, identity: 0.8

gtgggaaacgttaaatattataaaacagat	CRISPR spacer
gggggaagcattaaatattataaaaaataa	Protospacer
* *****.*.*************** * *

101. spacer 1.33|274538|30|NZ_CP019615|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP035190 (Bacillus licheniformis strain SRCM103914 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.8

acaaaactctctaattcaattgctccatca	CRISPR spacer
accgttctctctaatacaaatgctccatca	Protospacer
** .  ********* *** **********

102. spacer 1.2|272491|30|NZ_CP019615|CRISPRCasFinder,CRT matches to MN692977 (Marine virus AFVG_117M37, complete genome) position: , mismatch: 7, identity: 0.767

ccacgtcagaccaagaacttaaaactatgc	CRISPR spacer
aaaccaaagacccagaacttaaaactatgg	Protospacer
  **   ***** ****************

103. spacer 1.6|272755|30|NZ_CP019615|CRISPRCasFinder,CRT matches to NZ_CP019429 (Pseudomonas sp. R76 plasmid p76, complete sequence) position: , mismatch: 7, identity: 0.767

gcgagtcaattcatcaaacccaatcagaaa	CRISPR spacer
atgagtcaattcatcaaactcaaacagcgg	Protospacer
..*****************.*** *** ..

104. spacer 1.6|272755|30|NZ_CP019615|CRISPRCasFinder,CRT matches to NZ_CP044458 (Acinetobacter indicus strain B18 plasmid pB18-3, complete sequence) position: , mismatch: 7, identity: 0.767

gcgagtcaattcatcaaacccaatcagaaa	CRISPR spacer
gttcttcaattcatcaaaccctatctgata	Protospacer
*.   **************** *** ** *

105. spacer 1.6|272755|30|NZ_CP019615|CRISPRCasFinder,CRT matches to NZ_CP039144 (Acinetobacter sp. 10FS3-1 plasmid p10FS3-1-1, complete sequence) position: , mismatch: 7, identity: 0.767

gcgagtcaattcatcaaacccaatcagaaa	CRISPR spacer
gttcttcaattcatcaaaccctatctgata	Protospacer
*.   **************** *** ** *

106. spacer 1.12|273152|30|NZ_CP019615|CRISPRCasFinder,CRT matches to CP003671 (Staphylococcus warneri SG1 plasmid clone pvSw2 genomic sequence) position: , mismatch: 7, identity: 0.767

ttaatgaagaactagaaacaattgaaaaca	CRISPR spacer
taattgaagaattagaaaaaattgaaattg	Protospacer
* * *******.****** ******** ..

107. spacer 1.12|273152|30|NZ_CP019615|CRISPRCasFinder,CRT matches to ACSJ01000014 (Clostridium phage D-1873 CLG.Contig159, whole genome shotgun sequence) position: , mismatch: 7, identity: 0.767

ttaatgaagaactagaaacaattgaaaaca	CRISPR spacer
tgatagaagaattagaaaaaattgaaaaac	Protospacer
* *  ******.****** *********

108. spacer 1.12|273152|30|NZ_CP019615|CRISPRCasFinder,CRT matches to NC_007581 (Clostridium phage c-st, complete genome) position: , mismatch: 7, identity: 0.767

ttaatgaagaactagaaacaattgaaaaca	CRISPR spacer
tgatagaagaattagaaaaaattgaaaaac	Protospacer
* *  ******.****** *********

109. spacer 1.12|273152|30|NZ_CP019615|CRISPRCasFinder,CRT matches to AP008983 (Clostridium phage c-st genomic DNA, complete genome) position: , mismatch: 7, identity: 0.767

ttaatgaagaactagaaacaattgaaaaca	CRISPR spacer
tgatagaagaattagaaaaaattgaaaaac	Protospacer
* *  ******.****** *********

110. spacer 1.18|273548|30|NZ_CP019615|CRISPRCasFinder,CRT,PILER-CR matches to MN592897 (Vibrio phage MZH0603, complete genome) position: , mismatch: 7, identity: 0.767

agtgcaatatttagcgtacacatcttttac	CRISPR spacer
cgggcaatctgtagcgtacacatcttcggc	Protospacer
 * ***** * ***************. .*

111. spacer 1.19|273614|30|NZ_CP019615|CRISPRCasFinder,CRT,PILER-CR matches to NC_015057 (Granulicella tundricola MP5ACTX9 plasmid pACIX901, complete sequence) position: , mismatch: 7, identity: 0.767

ttggtcaatagatgactgtatttcttgctc	CRISPR spacer
gggtttgatcgatgactgtattgcttgctc	Protospacer
  * *..** ************ *******

112. spacer 1.19|273614|30|NZ_CP019615|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP045274 (Bacillus megaterium strain FDU301 plasmid pFDU301B, complete sequence) position: , mismatch: 7, identity: 0.767

ttggtcaatagatgactgtatttcttgctc	CRISPR spacer
tttttcaataggtgacagtatttcttgtaa	Protospacer
**  *******.**** **********.

113. spacer 1.19|273614|30|NZ_CP019615|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032534 (Bacillus megaterium NCT-2 plasmid pNCT2_6, complete sequence) position: , mismatch: 7, identity: 0.767

ttggtcaatagatgactgtatttcttgctc	CRISPR spacer
tttttcaataggtgacagtatttcttgtaa	Protospacer
**  *******.**** **********.

114. spacer 1.22|273812|30|NZ_CP019615|CRISPRCasFinder,CRT,PILER-CR matches to NC_019773 (Anabaena cylindrica PCC 7122 plasmid pANACY.03, complete sequence) position: , mismatch: 7, identity: 0.767

taataaacaagaaatattacttcatgaatc	CRISPR spacer
agaaaaacaagaaaaattactacatgaggc	Protospacer
 .* ********** ****** *****. *

115. spacer 1.22|273812|30|NZ_CP019615|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP054832 (Staphylococcus saprophyticus strain UTI-045 plasmid pUTI-045-1, complete sequence) position: , mismatch: 7, identity: 0.767

taataaacaagaaatattacttcatgaatc	CRISPR spacer
ggattataaagaaatattacttcaagaatt	Protospacer
 .** *  **************** ****.

116. spacer 1.22|273812|30|NZ_CP019615|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017467 (Staphylococcus nepalensis strain JS11 plasmid pSNJS1101, complete sequence) position: , mismatch: 7, identity: 0.767

taataaacaagaaatattacttcatgaatc	CRISPR spacer
ggattataaagaaatattacttcaagaatt	Protospacer
 .** *  **************** ****.

117. spacer 1.26|274076|30|NZ_CP019615|CRISPRCasFinder,CRT,PILER-CR matches to M72412 (Bacillus amyloliquefaciens phage H2 5C-DNA methyltransferase gene, complete cds) position: , mismatch: 7, identity: 0.767

agtgttggagactgcaaggatttccggatt	CRISPR spacer
aatgttggagactgcaagcatttgatgaag	Protospacer
*.**************** ****   **

118. spacer 1.27|274142|30|NZ_CP019615|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021032 (Rhizobium sp. NXC14 plasmid pRspNXC14b, complete sequence) position: , mismatch: 7, identity: 0.767

aacctgcaggtgctgtgttcacgtcagcaa	CRISPR spacer
aataggcaggtgctgtgttcatgccagccg	Protospacer
**.  ****************.*.**** .

119. spacer 1.32|274472|30|NZ_CP019615|CRISPRCasFinder,CRT,PILER-CR matches to MK448921 (Streptococcus phage Javan374, complete genome) position: , mismatch: 7, identity: 0.767

gcatcgtaccccagttcatgaagcgcggta	CRISPR spacer
acatcataccccagttcatcaagcgctccg	Protospacer
.****.************* ******  ..

120. spacer 1.32|274472|30|NZ_CP019615|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 7, identity: 0.767

gcatcgtaccccagttcatgaagcgcggta	CRISPR spacer
gcatcgcaccccaggtcatgaagttcgtgt	Protospacer
******.******* ********. **

121. spacer 1.34|274604|30|NZ_CP019615|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020328 (Paenibacillus larvae subsp. pulvifaciens strain CCM 38 plasmid pPLP1, complete sequence) position: , mismatch: 7, identity: 0.767

tttataaagaatacttgcggggcataaatg	CRISPR spacer
tatgtaaagaatacttgcgggccttaatac	Protospacer
* *.***************** * ***

122. spacer 1.34|274604|30|NZ_CP019615|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019795 (Paenibacillus larvae subsp. pulvifaciens strain ATCC 13537 plasmid pPLP1, complete sequence) position: , mismatch: 7, identity: 0.767

tttataaagaatacttgcggggcataaatg	CRISPR spacer
tatgtaaagaatacttgcgggccttaatac	Protospacer
* *.***************** * ***

123. spacer 1.34|274604|30|NZ_CP019615|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019660 (Paenibacillus larvae subsp. larvae strain Eric_IV plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

tttataaagaatacttgcggggcataaatg	CRISPR spacer
tatgtaaagaatacttgcgggccttaatac	Protospacer
* *.***************** * ***

124. spacer 1.34|274604|30|NZ_CP019615|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019657 (Paenibacillus larvae subsp. larvae strain Eric_III plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.767

tttataaagaatacttgcggggcataaatg	CRISPR spacer
tatgtaaagaatacttgcgggccttaatac	Protospacer
* *.***************** * ***

125. spacer 1.37|274802|30|NZ_CP019615|CRISPRCasFinder,CRT,PILER-CR matches to MH358458 (Escherichia phage phi G17, complete genome) position: , mismatch: 7, identity: 0.767

ttaaatacgatggaattaatctatcgatgc	CRISPR spacer
ttaaatacgatggatttaatgtactgaata	Protospacer
************** ***** **..**

126. spacer 1.39|274934|30|NZ_CP019615|CRISPRCasFinder,CRT matches to MN956514 (Salmonella phage L6jm, complete genome) position: , mismatch: 7, identity: 0.767

taatattcttcccccccatcgctaacaggg	CRISPR spacer
aaaacttcttccccctcatcactaacagta	Protospacer
 **  **********.****.******* .

127. spacer 1.5|272689|30|NZ_CP019615|CRISPRCasFinder,CRT matches to KY794642 (Staphylococcus phage vB_Sau_Clo6, complete genome) position: , mismatch: 8, identity: 0.733

tcagacttctatatccacaataaaagccct	CRISPR spacer
caggtcttctgtatccacaataaaaggaat	Protospacer
. .* *****.***************   *

128. spacer 1.6|272755|30|NZ_CP019615|CRISPRCasFinder,CRT matches to LC425518 (Uncultured phage DNA, contig: NODE577) position: , mismatch: 8, identity: 0.733

gcgagtcaattcatcaaacccaatcagaaa	CRISPR spacer
gtgagtcaattcatcaaaacctatcctcgc	Protospacer
*.**************** ** ***   .

129. spacer 1.8|272887|31|NZ_CP019615|CRISPRCasFinder,CRT matches to KP054477 (Lactobacillus phage LfeInf, complete genome) position: , mismatch: 8, identity: 0.742

ctcacgttgtcaaggtcaaattttagatatg	CRISPR spacer
accgtgttgtcaaggttaaactttagataac	Protospacer
 .*..***********.***.********

130. spacer 1.11|273086|30|NZ_CP019615|CRISPRCasFinder,CRT matches to MN693719 (Marine virus AFVG_250M1014, complete genome) position: , mismatch: 8, identity: 0.733

tttggtcgaattcttccgcatctttaaact	CRISPR spacer
acgttccagattcttccgcatctttaaact	Protospacer
 .   .*..*********************

131. spacer 1.11|273086|30|NZ_CP019615|CRISPRCasFinder,CRT matches to NZ_CP014361 (Methylomonas sp. DH-1 plasmid, complete sequence) position: , mismatch: 8, identity: 0.733

tttggtcgaattcttccgcatctttaaact	CRISPR spacer
tcaaatcgaatttttccgcatcttttaatc	Protospacer
*. ..*******.************ **..

132. spacer 1.12|273152|30|NZ_CP019615|CRISPRCasFinder,CRT matches to NZ_CP031069 (Bacillus sp. JAS24-2 plasmid pl626, complete sequence) position: , mismatch: 8, identity: 0.733

ttaatgaagaactagaaacaattgaaaaca	CRISPR spacer
aagatgaagaactagaagcacttgaacaat	Protospacer
  .**************.** ***** *

133. spacer 1.12|273152|30|NZ_CP019615|CRISPRCasFinder,CRT matches to NZ_CP010578 (Bacillus thuringiensis serovar morrisoni strain BGSC 4AA1 plasmid pBMB232, complete sequence) position: , mismatch: 8, identity: 0.733

ttaatgaagaactagaaacaattgaaaaca	CRISPR spacer
aagatgaagaactagaagcacttgaacaat	Protospacer
  .**************.** ***** *

134. spacer 1.12|273152|30|NZ_CP019615|CRISPRCasFinder,CRT matches to NZ_CP010579 (Bacillus thuringiensis serovar morrisoni strain BGSC 4AA1 plasmid pBMB92, complete sequence) position: , mismatch: 8, identity: 0.733

ttaatgaagaactagaaacaattgaaaaca	CRISPR spacer
aagatgaagaactagaagcacttgaacaat	Protospacer
  .**************.** ***** *

135. spacer 1.12|273152|30|NZ_CP019615|CRISPRCasFinder,CRT matches to NZ_CP020005 (Bacillus thuringiensis strain Bacillus thuringiensis L-7601 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.733

ttaatgaagaactagaaacaattgaaaaca	CRISPR spacer
aagatgaagaactagaagcacttgaacaat	Protospacer
  .**************.** ***** *

136. spacer 1.12|273152|30|NZ_CP019615|CRISPRCasFinder,CRT matches to NZ_CP015177 (Bacillus thuringiensis serovar alesti strain BGSC 4C1 plasmid pBMB267, complete sequence) position: , mismatch: 8, identity: 0.733

ttaatgaagaactagaaacaattgaaaaca	CRISPR spacer
aagatgaagaactagaagcacttgaacaat	Protospacer
  .**************.** ***** *

137. spacer 1.12|273152|30|NZ_CP019615|CRISPRCasFinder,CRT matches to NZ_CP022446 (Bacillus cereus C1L plasmid pC1L1, complete sequence) position: , mismatch: 8, identity: 0.733

ttaatgaagaactagaaacaattgaaaaca	CRISPR spacer
aagatgaagaactagaagcacttgaacaat	Protospacer
  .**************.** ***** *

138. spacer 1.12|273152|30|NZ_CP019615|CRISPRCasFinder,CRT matches to NZ_CP044979 (Bacillus thuringiensis strain BT62 plasmid pBT62A, complete sequence) position: , mismatch: 8, identity: 0.733

ttaatgaagaactagaaacaattgaaaaca	CRISPR spacer
aagatgaagaactagaagcacttgaacaat	Protospacer
  .**************.** ***** *

139. spacer 1.12|273152|30|NZ_CP019615|CRISPRCasFinder,CRT matches to NZ_CP044980 (Bacillus thuringiensis strain BT62 plasmid pBT62B, complete sequence) position: , mismatch: 8, identity: 0.733

ttaatgaagaactagaaacaattgaaaaca	CRISPR spacer
aagatgaagaactagaagcacttgaacaat	Protospacer
  .**************.** ***** *

140. spacer 1.12|273152|30|NZ_CP019615|CRISPRCasFinder,CRT matches to NZ_CP010111 (Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-5, complete sequence) position: , mismatch: 8, identity: 0.733

ttaatgaagaactagaaacaattgaaaaca	CRISPR spacer
aagatgaagaactagaagcacttgaacaat	Protospacer
  .**************.** ***** *

141. spacer 1.12|273152|30|NZ_CP019615|CRISPRCasFinder,CRT matches to NZ_CP053953 (Bacillus cereus strain FDAARGOS_798 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.733

ttaatgaagaactagaaacaattgaaaaca	CRISPR spacer
aagatgaagaactagaagcacttgaacaat	Protospacer
  .**************.** ***** *

142. spacer 1.12|273152|30|NZ_CP019615|CRISPRCasFinder,CRT matches to NZ_CP014853 (Bacillus thuringiensis strain HD12 plasmid pHD120345, complete sequence) position: , mismatch: 8, identity: 0.733

ttaatgaagaactagaaacaattgaaaaca	CRISPR spacer
aagatgaagaactagaagcacttgaacaat	Protospacer
  .**************.** ***** *

143. spacer 1.12|273152|30|NZ_CP019615|CRISPRCasFinder,CRT matches to NZ_CP011154 (Bacillus cereus strain CMCC P0011 plasmid pRML05, complete sequence) position: , mismatch: 8, identity: 0.733

ttaatgaagaactagaaacaattgaaaaca	CRISPR spacer
aagatgaagaactagaagcacttgaacaat	Protospacer
  .**************.** ***** *

144. spacer 1.12|273152|30|NZ_CP019615|CRISPRCasFinder,CRT matches to NZ_CP011152 (Bacillus cereus strain CMCC P0021 plasmid pRML04, complete sequence) position: , mismatch: 8, identity: 0.733

ttaatgaagaactagaaacaattgaaaaca	CRISPR spacer
aagatgaagaactagaagcacttgaacaat	Protospacer
  .**************.** ***** *

145. spacer 1.12|273152|30|NZ_CP019615|CRISPRCasFinder,CRT matches to NZ_CP045607 (Bacillus cereus strain SB1 plasmid p1, complete sequence) position: , mismatch: 8, identity: 0.733

ttaatgaagaactagaaacaattgaaaaca	CRISPR spacer
aagatgaagaactagaagcacttgaacaat	Protospacer
  .**************.** ***** *

146. spacer 1.12|273152|30|NZ_CP019615|CRISPRCasFinder,CRT matches to NZ_CP009636 (Bacillus cereus 03BB108 plasmid pBFI_2, complete sequence) position: , mismatch: 8, identity: 0.733

ttaatgaagaactagaaacaattgaaaaca	CRISPR spacer
aagatgaagaactagaagcacttgaacaat	Protospacer
  .**************.** ***** *

147. spacer 1.12|273152|30|NZ_CP019615|CRISPRCasFinder,CRT matches to NZ_CP016589 (Bacillus thuringiensis strain KNU-07 plasmid pBTKNU07-01, complete sequence) position: , mismatch: 8, identity: 0.733

ttaatgaagaactagaaacaattgaaaaca	CRISPR spacer
aagatgaagaactagaagcacttgaacaat	Protospacer
  .**************.** ***** *

148. spacer 1.12|273152|30|NZ_CP019615|CRISPRCasFinder,CRT matches to NZ_CP053657 (Bacillus cereus strain CTMA_1571 plasmid p.1, complete sequence) position: , mismatch: 8, identity: 0.733

ttaatgaagaactagaaacaattgaaaaca	CRISPR spacer
aagatgaagaactagaagcacttgaacaat	Protospacer
  .**************.** ***** *

149. spacer 1.12|273152|30|NZ_CP019615|CRISPRCasFinder,CRT matches to NZ_CP053962 (Bacillus cereus strain FDAARGOS_802 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.733

ttaatgaagaactagaaacaattgaaaaca	CRISPR spacer
aagatgaagaactagaagcacttgaacaat	Protospacer
  .**************.** ***** *

150. spacer 1.12|273152|30|NZ_CP019615|CRISPRCasFinder,CRT matches to NZ_CP053950 (Bacillus cereus strain FDAARGOS_799 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.733

ttaatgaagaactagaaacaattgaaaaca	CRISPR spacer
aagatgaagaactagaagcacttgaacaat	Protospacer
  .**************.** ***** *

151. spacer 1.12|273152|30|NZ_CP019615|CRISPRCasFinder,CRT matches to LC494302 (Escherichia phage SP27 DNA, complete genome) position: , mismatch: 8, identity: 0.733

ttaatgaagaactagaaacaattgaaaaca	CRISPR spacer
acgaagaagaactagcagcaattgaaaaat	Protospacer
 ..* ********** *.**********

152. spacer 1.12|273152|30|NZ_CP019615|CRISPRCasFinder,CRT matches to MK817115 (Escherichia phage vB_EcoM_phAPEC6, complete genome) position: , mismatch: 8, identity: 0.733

ttaatgaagaactagaaacaattgaaaaca	CRISPR spacer
acgaagaagaactagcagcaattgaaaaat	Protospacer
 ..* ********** *.**********

153. spacer 1.12|273152|30|NZ_CP019615|CRISPRCasFinder,CRT matches to NC_027364 (Escherichia phage PBECO 4, complete genome) position: , mismatch: 8, identity: 0.733

ttaatgaagaactagaaacaattgaaaaca	CRISPR spacer
acgaagaagaactagcagcaattgaaaaat	Protospacer
 ..* ********** *.**********

154. spacer 1.12|273152|30|NZ_CP019615|CRISPRCasFinder,CRT matches to MH383160 (Escherichia phage UB, complete genome) position: , mismatch: 8, identity: 0.733

ttaatgaagaactagaaacaattgaaaaca	CRISPR spacer
acgaagaagaactagcagcaattgaaaaat	Protospacer
 ..* ********** *.**********

155. spacer 1.12|273152|30|NZ_CP019615|CRISPRCasFinder,CRT matches to MK327931 (Escherichia phage vB_EcoM_G17, complete genome) position: , mismatch: 8, identity: 0.733

ttaatgaagaactagaaacaattgaaaaca	CRISPR spacer
acgaagaagaactagcagcaattgaaaaat	Protospacer
 ..* ********** *.**********

156. spacer 1.12|273152|30|NZ_CP019615|CRISPRCasFinder,CRT matches to MT325768 (Psychrobacillus phage Perkons, complete genome) position: , mismatch: 8, identity: 0.733

ttaatgaagaactagaaacaattgaaaaca	CRISPR spacer
ttaatgaacaacttgaaacaattatattat	Protospacer
******** **** *********. *

157. spacer 1.12|273152|30|NZ_CP019615|CRISPRCasFinder,CRT matches to LT603033 (Escherichia phage vB_Eco_slurp01 genome assembly, chromosome: I) position: , mismatch: 8, identity: 0.733

ttaatgaagaactagaaacaattgaaaaca	CRISPR spacer
acgaagaagaactagcagcaattgaaaaat	Protospacer
 ..* ********** *.**********

158. spacer 1.12|273152|30|NZ_CP019615|CRISPRCasFinder,CRT matches to KM507819 (Escherichia phage 121Q, complete genome) position: , mismatch: 8, identity: 0.733

ttaatgaagaactagaaacaattgaaaaca	CRISPR spacer
acgaagaagaactagcagcaattgaaaaat	Protospacer
 ..* ********** *.**********

159. spacer 1.13|273218|30|NZ_CP019615|CRISPRCasFinder,CRT matches to JX094500 (Cronobacter phage CR5, complete genome) position: , mismatch: 8, identity: 0.733

gcacgtatgatcgtcttctttgatgacctc	CRISPR spacer
ggtatcatgaccgtcttctttgatgagctg	Protospacer
*    .****.*************** **

160. spacer 1.22|273812|30|NZ_CP019615|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP040856 (Lactobacillus johnsonii strain G2A plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.733

taataaacaagaaatattacttcatgaatc	CRISPR spacer
agaagaacaagaaaaattacttcatgatca	Protospacer
 .* .********* ************ .

161. spacer 1.33|274538|30|NZ_CP019615|CRISPRCasFinder,CRT,PILER-CR matches to KT160311 (Vibrio phage H188, complete genome) position: , mismatch: 8, identity: 0.733

acaaaactctctaattcaattgctccatca	CRISPR spacer
ctacccttctctaattcaattgctctatct	Protospacer
 .*   .******************.***

162. spacer 1.36|274736|30|NZ_CP019615|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP044096 (Streptococcus pyogenes strain FDAARGOS_668 plasmid unnamed3) position: , mismatch: 8, identity: 0.733

actgatgaaagtatttctccaatgacaagt	CRISPR spacer
ttcgtcaaaagtatttctcctatcacaagt	Protospacer
 ..* ..************* ** ******

163. spacer 1.12|273152|30|NZ_CP019615|CRISPRCasFinder,CRT matches to MK770119 (Pantoea phage vB_PagS_AAS21, complete genome) position: , mismatch: 9, identity: 0.7

ttaatgaagaactagaaacaattgaaaaca	CRISPR spacer
atattgaagacctagaaacaattgcgggtt	Protospacer
 ** ****** ************* ....

164. spacer 1.12|273152|30|NZ_CP019615|CRISPRCasFinder,CRT matches to MG983742 (Bacillus phage Anath, complete genome) position: , mismatch: 9, identity: 0.7

ttaatgaagaactagaaacaattgaaaaca	CRISPR spacer
ggctggaagaacaagaaataattgaaaagg	Protospacer
     ******* *****.********* .

165. spacer 1.32|274472|30|NZ_CP019615|CRISPRCasFinder,CRT,PILER-CR matches to NC_012858 (Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132502, complete sequence) position: , mismatch: 9, identity: 0.7

gcatcgtaccccagttcatgaagcgcggta	CRISPR spacer
gcatcgtaccccagttactgaagtagtagg	Protospacer
****************  *****..  . .

166. spacer 1.12|273152|30|NZ_CP019615|CRISPRCasFinder,CRT matches to MK448884 (Streptococcus phage Javan246, complete genome) position: , mismatch: 10, identity: 0.667

ttaatgaagaactagaaacaattgaaaaca	CRISPR spacer
aaaacgaagaactagaaacaattatctctc	Protospacer
  **.******************.    .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

285895 : 325153

Listeria_phage(94.34%)

holin,integrase,tail,capsid,terminase

attL 285759:285808|attR 325578:325627

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
285759:285808	attL	NA	NA	NA	NA
WP_003724018.1\|285895_287059_-\|integrase	site-specific integrase	S5MNZ2	Brevibacillus_phage	4.4e-50	31.2
WP_003724017.1\|287121_287727_-	hypothetical protein	NA	NA	NA	NA
WP_003724016.1\|287785_288493_-	hypothetical protein	A0A0B5CTT6	Listeria_phage	2.8e-124	100.0
WP_003724015.1\|288507_288933_-	ImmA/IrrE family metallo-endopeptidase	A0A0B5CTZ7	Listeria_phage	2.2e-76	100.0
WP_003724014.1\|288948_289371_-	helix-turn-helix transcriptional regulator	A0A0B5CYL9	Listeria_phage	7.7e-69	98.6
WP_003733688.1\|289536_289746_+	helix-turn-helix domain-containing protein	A0A0B5D0D3	Listeria_phage	3.5e-30	95.6
WP_003733687.1\|289766_289961_+	hypothetical protein	A0A059T6E5	Listeria_phage	1.4e-25	95.3
WP_003733686.1\|289972_290257_+	hypothetical protein	A0A0B5D168	Listeria_phage	4.5e-41	85.1
WP_003722567.1\|290282_290564_+	hypothetical protein	A8ATX8	Listeria_phage	1.8e-37	95.7
WP_003733684.1\|290565_290763_-	hypothetical protein	Q9T179	Listeria_phage	4.0e-20	96.0
WP_003733683.1\|290826_291603_+	phage antirepressor Ant	A0A0B5D0I2	Listeria_phage	6.9e-140	97.7
WP_003733682.1\|291726_292257_+	hypothetical protein	A0A0B5D173	Listeria_phage	2.7e-79	89.6
WP_003733681.1\|292246_292453_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_003722564.1\|292555_292744_+	hypothetical protein	Q9T175	Listeria_phage	1.8e-22	82.3
WP_003723967.1\|292976_294488_+	hypothetical protein	A0A2I7SC81	Paenibacillus_phage	6.1e-76	36.2
WP_077625311.1\|294480_295392_+	recombinase RecT	NA	NA	NA	NA
WP_077625312.1\|295429_296335_+	DnaD domain-containing protein	A0A0B5D175	Listeria_phage	2.0e-143	93.0
WP_003723963.1\|296338_296536_+	hypothetical protein	NA	NA	NA	NA
WP_003727760.1\|296842_297823_+	DNA (cytosine-5-)-methyltransferase	D2IZY5	Enterococcus_phage	9.1e-97	55.6
WP_077625314.1\|297819_298359_+	DUF1642 domain-containing protein	A0A059T7S4	Listeria_phage	3.0e-57	65.0
WP_077323777.1\|298351_298645_+	hypothetical protein	A8ATM4	Listeria_phage	2.0e-36	83.5
WP_020830814.1\|298751_299039_+	hypothetical protein	R4IBL5	Listeria_phage	7.4e-23	60.5
WP_020830815.1\|299035_299314_+	DUF1642 domain-containing protein	R4IBV9	Listeria_phage	9.6e-20	53.3
WP_070754240.1\|299310_299712_+	hypothetical protein	A0A059T6C9	Listeria_phage	1.0e-54	78.9
WP_070754238.1\|299708_299987_+	hypothetical protein	NA	NA	NA	NA
WP_070754236.1\|299986_300469_+	single-stranded DNA-binding protein	A8ATZ7	Listeria_phage	4.6e-78	95.6
WP_015967175.1\|300500_300806_+	hypothetical protein	A8ATZ8	Listeria_phage	1.7e-46	100.0
WP_014601286.1\|300802_300943_+	BH0509 family protein	A8ATZ9	Listeria_phage	2.6e-18	100.0
WP_003769966.1\|300908_301313_+	endodeoxyribonuclease	A8AU00	Listeria_phage	5.4e-72	100.0
WP_015967177.1\|301441_301606_+	hypothetical protein	A8AU02	Listeria_phage	3.9e-21	100.0
WP_015967178.1\|301624_302059_+	hypothetical protein	A8AU03	Listeria_phage	5.1e-76	100.0
WP_015987428.1\|302240_302873_+	hypothetical protein	A8AU05	Listeria_phage	1.1e-114	100.0
WP_012951944.1\|302953_303181_+	hypothetical protein	A8AU06	Listeria_phage	1.5e-34	100.0
WP_015987406.1\|303220_303961_+	hypothetical protein	A8ATU5	Listeria_phage	3.7e-135	100.0
WP_047933366.1\|303926_305273_+\|terminase	PBSX family phage terminase large subunit	A8ATU6	Listeria_phage	5.9e-264	99.5
WP_015987416.1\|305287_306844_+	hypothetical protein	A8ATU7	Listeria_phage	4.8e-302	100.0
WP_077625315.1\|306848_307889_+\|capsid	minor capsid protein	A8ATU8	Listeria_phage	4.3e-198	98.6
WP_015987425.1\|307984_308539_+	hypothetical protein	A8ATU9	Listeria_phage	2.3e-89	100.0
WP_015987427.1\|308561_309434_+	F420-dependent oxidoreductase	A8ATV0	Listeria_phage	1.2e-161	100.0
WP_172425835.1\|309447_309615_+	hypothetical protein	A8ATV1	Listeria_phage	1.7e-11	100.0
WP_012951937.1\|309615_309969_+	hypothetical protein	A8ATV2	Listeria_phage	7.6e-62	100.0
WP_015987430.1\|309968_310334_+	hypothetical protein	A8ATV3	Listeria_phage	4.4e-65	100.0
WP_015987407.1\|310323_310641_+	HK97 gp10 family phage protein	A8ATV4	Listeria_phage	9.9e-53	100.0
WP_003725064.1\|310637_311009_+	hypothetical protein	A8ATV5	Listeria_phage	8.5e-64	100.0
WP_015987408.1\|311013_311700_+	Ig domain-containing protein	A8ATV6	Listeria_phage	9.4e-117	100.0
WP_077625316.1\|311755_312187_+	hypothetical protein	A8ATV7	Listeria_phage	2.1e-74	99.3
WP_072225507.1\|312183_312495_+	hypothetical protein	A8ATV8	Listeria_phage	1.2e-42	98.9
WP_077625317.1\|312499_317290_+\|tail	phage tail tape measure protein	A8ATV9	Listeria_phage	0.0e+00	96.3
WP_077625318.1\|317286_318855_+\|tail	phage tail family protein	A8ATW0	Listeria_phage	1.4e-304	99.4
WP_077625319.1\|318867_321033_+\|tail	phage tail protein	A8ATW1	Listeria_phage	0.0e+00	94.0
WP_003722523.1\|321071_321437_+	hypothetical protein	Q9T1A0	Listeria_phage	7.4e-12	100.0
WP_003722522.1\|321449_321731_+\|holin	holin	A8ASL4	Listeria_phage	3.4e-41	94.6
WP_003733663.1\|321730_322576_+	M15 family metallopeptidase	A0A059T7Y8	Listeria_phage	2.7e-137	94.7
WP_003722520.1\|322616_323390_-	DUF3825 domain-containing protein	A8ATW5	Listeria_phage	9.5e-150	100.0
WP_003733661.1\|323664_324162_-	AP2 domain-containing protein	A8ATW6	Listeria_phage	3.8e-91	100.0
WP_003722518.1\|324186_324636_-	anti-CRISPR protein AcrIIA1	A8ATW7	Listeria_phage	2.4e-76	100.0
WP_003731276.1\|324636_324888_-	hypothetical protein	A8ATW8	Listeria_phage	2.0e-40	100.0
WP_003731277.1\|324919_325153_-	hypothetical protein	A8ATW9	Listeria_phage	4.3e-13	100.0
325578:325627	attR	NA	NA	NA	NA

DBSCAN-SWA_2

451953 : 459795

Streptococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003722610.1\|451953_452913_+	thioredoxin-disulfide reductase	G3MA85	Bacillus_virus	2.0e-88	53.7
WP_009918601.1\|453029_454013_+	UDP-glucose 4-epimerase GalE	A0A2K9L5H6	Tupanvirus	3.1e-52	38.7
WP_009918600.1\|454029_455091_+	galactose mutarotase	NA	NA	NA	NA
WP_003725409.1\|455132_456863_+	phospho-sugar mutase	A0A1X9I671	Streptococcus_phage	9.5e-174	53.1
WP_003722606.1\|456970_457846_+	RNase adapter RapZ	A0A0R8VB27	Thermobifida_phage	1.9e-08	29.7
WP_003731212.1\|457847_458816_+	YvcK family protein	A1IMD5	Streptococcus_phage	1.8e-68	43.6
WP_003725407.1\|458823_459795_+	DNA-binding protein WhiA	Q7AWZ3	Streptococcus_phage	5.2e-52	39.4

DBSCAN-SWA_3

609016 : 648474

Listeria_phage(93.1%)

holin,plate,tail,portal,capsid,terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003739618.1\|609016_609364_+	helix-turn-helix transcriptional regulator	A0A0A7RTK4	Clostridium_phage	9.9e-06	40.7
WP_003733645.1\|609418_609895_-	competence protein ComK	NA	NA	NA	NA
WP_003733644.1\|609885_611244_-	recombinase family protein	Q8LTD8	Listeria_phage	2.5e-254	98.5
WP_003749255.1\|611420_612194_-	DUF1829 domain-containing protein	NA	NA	NA	NA
WP_003749254.1\|612213_612669_-	hypothetical protein	Q6SEA3	Lactobacillus_prophage	1.9e-17	39.0
WP_077625325.1\|612719_613370_-	hypothetical protein	NA	NA	NA	NA
WP_012582373.1\|613425_613593_-	hypothetical protein	NA	NA	NA	NA
WP_031669386.1\|613748_614225_-	helix-turn-helix transcriptional regulator	A8ASM2	Listeria_phage	4.5e-57	80.3
WP_012582375.1\|614387_614621_+	helix-turn-helix transcriptional regulator	A8ASM3	Listeria_phage	1.6e-31	95.9
WP_003770002.1\|614641_614827_+	hypothetical protein	NA	NA	NA	NA
WP_052197039.1\|614786_615098_-	hypothetical protein	NA	NA	NA	NA
WP_003735007.1\|615115_615310_+	hypothetical protein	A0A059T6E5	Listeria_phage	1.3e-26	100.0
WP_003769996.1\|615321_615606_+	hypothetical protein	A0A0B5D168	Listeria_phage	1.6e-46	98.9
WP_003733634.1\|615645_615882_+	hypothetical protein	A0A059T5E9	Listeria_phage	3.3e-37	100.0
WP_069007280.1\|615878_616160_+	hypothetical protein	Q9T180	Listeria_phage	6.5e-40	96.8
WP_003727748.1\|616191_616353_+	hypothetical protein	A0A059T7X7	Listeria_phage	1.2e-19	98.1
WP_025370647.1\|616345_616588_-	hypothetical protein	A0A059T7Q3	Listeria_phage	1.5e-37	98.8
WP_003747301.1\|616651_617425_+	phage repressor protein/antirepressor Ant	A8ATY0	Listeria_phage	2.4e-140	99.6
WP_072239139.1\|617546_618080_+	hypothetical protein	Q9T177	Listeria_phage	3.1e-83	89.8
WP_014601517.1\|618076_618292_+	hypothetical protein	Q9T176	Listeria_phage	6.7e-21	69.0
WP_072239141.1\|618399_618588_+	hypothetical protein	Q9T175	Listeria_phage	6.5e-20	74.2
WP_003747308.1\|618889_619084_+	hypothetical protein	A0A059T6E8	Listeria_phage	6.0e-29	96.9
WP_003747311.1\|619080_619557_+	siphovirus Gp157 family protein	A0A059T5F1	Listeria_phage	7.1e-71	93.0
WP_003769987.1\|619561_620200_+	ERF family protein	A8ASN3	Listeria_phage	8.0e-78	74.8
WP_077625326.1\|620213_621128_+	DnaD domain-containing protein	A0A0B5D175	Listeria_phage	1.5e-138	89.8
WP_003723963.1\|621131_621329_+	hypothetical protein	NA	NA	NA	NA
WP_003727760.1\|621635_622616_+	DNA (cytosine-5-)-methyltransferase	D2IZY5	Enterococcus_phage	9.1e-97	55.6
WP_077625314.1\|622612_623152_+	DUF1642 domain-containing protein	A0A059T7S4	Listeria_phage	3.0e-57	65.0
WP_077323777.1\|623144_623438_+	hypothetical protein	A8ATM4	Listeria_phage	2.0e-36	83.5
WP_020830814.1\|623544_623832_+	hypothetical protein	R4IBL5	Listeria_phage	7.4e-23	60.5
WP_020830815.1\|623828_624107_+	DUF1642 domain-containing protein	R4IBV9	Listeria_phage	9.6e-20	53.3
WP_070754240.1\|624103_624505_+	hypothetical protein	A0A059T6C9	Listeria_phage	1.0e-54	78.9
WP_070754238.1\|624501_624780_+	hypothetical protein	NA	NA	NA	NA
WP_070754236.1\|624779_625262_+	single-stranded DNA-binding protein	A8ATZ7	Listeria_phage	4.6e-78	95.6
WP_015967175.1\|625293_625599_+	hypothetical protein	A8ATZ8	Listeria_phage	1.7e-46	100.0
WP_014601286.1\|625595_625736_+	BH0509 family protein	A8ATZ9	Listeria_phage	2.6e-18	100.0
WP_003769966.1\|625701_626106_+	endodeoxyribonuclease	A8AU00	Listeria_phage	5.4e-72	100.0
WP_015967177.1\|626234_626399_+	hypothetical protein	A8AU02	Listeria_phage	3.9e-21	100.0
WP_015967178.1\|626417_626852_+	hypothetical protein	A8AU03	Listeria_phage	5.1e-76	100.0
WP_039120307.1\|627793_628336_+\|terminase	terminase small subunit	A0A0B5CU16	Listeria_phage	4.9e-84	95.5
WP_077625380.1\|628304_629636_+\|terminase	PBSX family phage terminase large subunit	A8ASJ2	Listeria_phage	2.9e-247	93.5
WP_077625328.1\|629648_631139_+\|portal	phage portal protein	Q9T1C0	Listeria_phage	2.5e-239	84.5
WP_077625329.1\|631144_632284_+\|capsid	phage minor capsid protein	A0A059T7W2	Listeria_phage	2.6e-196	93.1
WP_061108341.1\|632362_632953_+	phage scaffolding protein	Q9T1B8	Listeria_phage	1.3e-74	88.6
WP_003769954.1\|632952_633954_+	hypothetical protein	A0A059T6D4	Listeria_phage	1.1e-182	97.6
WP_061108342.1\|633971_634367_+	hypothetical protein	A0A059T5E3	Listeria_phage	2.3e-59	90.8
WP_003727786.1\|634366_634729_+	hypothetical protein	A0A0B5D151	Listeria_phage	8.6e-61	95.8
WP_003727787.1\|634728_635067_+\|capsid	minor capsid protein	Q9T1B3	Listeria_phage	2.2e-58	100.0
WP_003727788.1\|635066_635474_+	hypothetical protein	Q9T1B2	Listeria_phage	9.0e-67	98.5
WP_003769949.1\|635476_635911_+\|tail	tail protein	Q9T1B1	Listeria_phage	6.0e-77	98.6
WP_012582410.1\|635933_636173_+	Ig-like domain-containing protein	A0A059T5E4	Listeria_phage	5.2e-22	75.9
WP_003769943.1\|636227_636650_+\|tail	phage tail assembly chaperone	Q9T1A9	Listeria_phage	5.9e-69	97.9
WP_003735024.1\|636655_637255_+	bacteriophage Gp15 family protein	A0A0B5CTW0	Listeria_phage	1.9e-76	72.0
WP_077625330.1\|637265_640337_+	tape measure protein	Q9T1A7	Listeria_phage	1.2e-62	93.4
WP_077310940.1\|640338_641157_+\|tail	phage tail family protein	Q9T1A6	Listeria_phage	8.8e-146	91.2
WP_077310942.1\|641165_642191_+\|tail	phage tail protein	Q9T1A5	Listeria_phage	6.2e-181	88.3
WP_009931500.1\|642191_643220_+	hypothetical protein	Q9T1A4	Listeria_phage	2.5e-190	98.8
WP_039120293.1\|643219_644293_+\|plate	phage baseplate upper protein	Q9T1A3	Listeria_phage	7.2e-196	98.9
WP_003722525.1\|644304_644622_+	hypothetical protein	Q9T1A2	Listeria_phage	6.2e-55	100.0
WP_003722524.1\|644626_644785_+	hypothetical protein	Q9T1A1	Listeria_phage	6.0e-19	100.0
WP_039177480.1\|644825_645128_+	hypothetical protein	A0A059T5E6	Listeria_phage	2.7e-39	94.1
WP_003733521.1\|645127_645394_+\|holin	phage holin	A0A059T684	Listeria_phage	9.8e-38	93.1
WP_077625331.1\|645393_646239_+	M15 family metallopeptidase	A0A059T7Y8	Listeria_phage	6.8e-133	90.8
WP_012951560.1\|646341_647340_+	DUF3644 domain-containing protein	A0A0N9RUA4	Staphylococcus_phage	3.9e-71	44.8
WP_003733518.1\|647545_648046_-	AP2 domain-containing protein	A8ATW6	Listeria_phage	1.4e-64	71.8
WP_003733517.1\|648042_648474_-	hypothetical protein	A8ATJ2	Listeria_phage	4.1e-25	81.7

DBSCAN-SWA_4

1176188 : 1184474

Prochlorococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003726215.1\|1176188_1177481_+	adenylosuccinate lyase	A0A1B3B081	Gordonia_phage	2.5e-17	33.0
WP_003734637.1\|1177561_1178275_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A0E3F9V5	Synechococcus_phage	6.7e-41	38.3
WP_003722248.1\|1178286_1178532_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA
WP_003726212.1\|1178535_1179219_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA
WP_009918191.1\|1179211_1181431_+	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	6.5e-159	40.8
WP_003722245.1\|1181415_1182843_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	1.1e-53	34.6
WP_003726210.1\|1182861_1183911_+	phosphoribosylformylglycinamidine cyclo-ligase	Q58MH8	Prochlorococcus_phage	3.2e-63	44.4
WP_003731569.1\|1183907_1184474_+	phosphoribosylglycinamide formyltransferase	E3SNR5	Prochlorococcus_phage	2.8e-26	38.5

DBSCAN-SWA_5

1673361 : 1847005

215

Listeria_phage(81.16%)

holin,integrase,plate,tail,tRNA,protease,portal,head,capsid,terminase

attL 1803063:1803086|attR 1847023:1847046

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003726416.1\|1673361_1675068_-\|tRNA	proline--tRNA ligase	NA	NA	NA	NA
WP_003726415.1\|1675108_1676371_-\|protease	RIP metalloprotease RseP	NA	NA	NA	NA
WP_003726414.1\|1676384_1677527_-	1-deoxy-D-xylulose-5-phosphate reductoisomerase	NA	NA	NA	NA
WP_003727496.1\|1677541_1678330_-	phosphatidate cytidylyltransferase	NA	NA	NA	NA
WP_003727497.1\|1678343_1679102_-	isoprenyl transferase	R9W0U9	Flavobacterium_phage	4.4e-22	42.1
WP_003723450.1\|1679332_1679890_-	ribosome recycling factor	NA	NA	NA	NA
WP_003723449.1\|1679889_1680618_-	UMP kinase	NA	NA	NA	NA
WP_003727498.1\|1680910_1681285_+	hypothetical protein	NA	NA	NA	NA
WP_012681273.1\|1681262_1682468_+	helicase SNF2	L0P6E9	Lactobacillus_phage	7.0e-91	46.6
WP_003731336.1\|1682457_1683762_+	DUF3440 domain-containing protein	A0A220GKF8	Streptococcus_phage	1.2e-133	52.1
WP_003726669.1\|1683771_1684278_+	ParB-like nuclease domain-containing protein	A0A220GKT8	Streptococcus_phage	1.4e-56	66.7
WP_003726667.1\|1685080_1685320_-	YneF family protein	NA	NA	NA	NA
WP_003734516.1\|1685540_1687535_-	transketolase	NA	NA	NA	NA
WP_003726567.1\|1687681_1687909_-	DUF896 domain-containing protein	NA	NA	NA	NA
WP_003727502.1\|1688002_1688332_-	cell division suppressor protein YneA	NA	NA	NA	NA
WP_003723438.1\|1688487_1689102_+	transcriptional repressor LexA	A0A1B2APZ1	Phage_Wrath	9.3e-15	62.1
WP_003727503.1\|1689132_1689657_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_077398075.1\|1689690_1689870_-	hypothetical protein	A0A2H4PQU3	Staphylococcus_phage	5.6e-13	77.1
WP_003723435.1\|1690413_1691748_-	type I glutamate--ammonia ligase	A0A1V0SJ53	Klosneuvirus	2.0e-06	26.4
WP_003719570.1\|1691818_1692187_-	MerR family transcriptional regulator	NA	NA	NA	NA
WP_003727505.1\|1692388_1693615_-	methionine gamma-lyase family protein	NA	NA	NA	NA
WP_012681271.1\|1693607_1694831_-	GTPase HflX	NA	NA	NA	NA
WP_003719566.1\|1694941_1695175_-	RNA chaperone Hfq	NA	NA	NA	NA
WP_003727506.1\|1695296_1696214_-\|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	NA	NA	NA	NA
WP_003723738.1\|1696340_1698017_-	glycerol-3-phosphate dehydrogenase/oxidase	NA	NA	NA	NA
WP_003726657.1\|1698249_1698948_-	glycerophosphodiester phosphodiesterase	A0A0S2MYI4	Enterococcus_phage	6.4e-12	31.9
WP_003727507.1\|1699160_1701047_+	peptidoglycan O-acetyltransferase OatA	B5WZU0	Pseudomonas_phage	3.8e-43	32.2
WP_009917681.1\|1701079_1702900_-	class 1 internalin InlK	NA	NA	NA	NA
WP_003726814.1\|1703527_1703995_-	S-ribosylhomocysteine lyase	NA	NA	NA	NA
WP_003727509.1\|1704077_1706537_-	DNA topoisomerase IV subunit A	G3M9Z5	Bacillus_virus	1.1e-101	31.8
WP_003727510.1\|1706533_1708501_-	DNA topoisomerase IV subunit B	G3M9Z3	Bacillus_virus	5.1e-123	42.5
WP_003727511.1\|1708681_1709089_-	CoA-binding protein	NA	NA	NA	NA
WP_003726698.1\|1709246_1709843_+	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA
WP_003726697.1\|1709884_1710757_-	aldose 1-epimerase family protein	NA	NA	NA	NA
WP_003724130.1\|1710759_1711071_-	hypothetical protein	NA	NA	NA	NA
WP_003727513.1\|1711093_1711513_-	acyl-CoA thioesterase	NA	NA	NA	NA
WP_003726695.1\|1711615_1712395_-	GTP-sensing pleiotropic transcriptional regulator CodY	NA	NA	NA	NA
WP_003727514.1\|1712415_1713825_-\|protease	ATP-dependent protease ATPase subunit HslU	W6AS21	Erwinia_phage	7.5e-44	27.8
WP_003724001.1\|1713838_1714378_-\|protease	ATP-dependent protease subunit HslV	NA	NA	NA	NA
WP_003731303.1\|1714398_1715301_-	tyrosine recombinase XerC	A0A142K7N4	Mycobacterium_phage	1.8e-14	29.5
WP_003727516.1\|1715583_1716888_-\|tRNA	FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO	NA	NA	NA	NA
WP_003727517.1\|1716950_1719029_-	type I DNA topoisomerase	A0A1V0SB35	Catovirus	5.4e-107	37.5
WP_003727518.1\|1719301_1720162_-	DNA-protecting protein DprA	NA	NA	NA	NA
WP_003727519.1\|1720295_1721081_-	ribonuclease HII	G4YAY0	Emiliania_huxleyi_virus	6.7e-26	37.6
WP_003726396.1\|1721077_1721941_-	ribosome biogenesis GTPase YlqF	NA	NA	NA	NA
WP_003727520.1\|1721950_1722493_-	type I signal peptidase SipZ	NA	NA	NA	NA
WP_003726394.1\|1722594_1723164_-	type I signal peptidase SipY	NA	NA	NA	NA
WP_003726393.1\|1723198_1723765_-	type I signal peptidase SipX	NA	NA	NA	NA
WP_003723886.1\|1723883_1725143_-\|protease	ATP-dependent protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	1.4e-145	63.2
WP_003723884.1\|1725327_1726611_-	trigger factor	NA	NA	NA	NA
WP_003727521.1\|1726725_1727664_-	hypothetical protein	NA	NA	NA	NA
WP_003727522.1\|1727925_1728591_-	hypothetical protein	NA	NA	NA	NA
WP_003727523.1\|1728606_1729140_-\|protease	matrixin family metalloprotease	NA	NA	NA	NA
WP_069019573.1\|1729422_1729644_-	hypothetical protein	A8ATX1	Listeria_phage	5.7e-23	93.1
WP_069019586.1\|1729640_1729874_-	hypothetical protein	A8ATC5	Listeria_phage	9.2e-32	85.7
WP_031648625.1\|1730183_1730549_+	hypothetical protein	A8ATJ4	Listeria_phage	3.8e-56	94.2
WP_023559354.1\|1730562_1730766_+	hypothetical protein	A8ATJ3	Listeria_phage	2.6e-30	95.5
WP_003731542.1\|1730793_1731015_+	helix-turn-helix transcriptional regulator	A8ATJ2	Listeria_phage	3.5e-33	95.9
WP_003731541.1\|1731076_1731910_-	N-acetylmuramoyl-L-alanine amidase	A0A1S7FZ94	Listeria_phage	2.5e-47	43.8
WP_031648624.1\|1731912_1732167_-\|holin	phage holin	A8ATJ0	Listeria_phage	9.4e-38	95.2
WP_023559355.1\|1732177_1732393_-	LysM peptidoglycan-binding domain-containing protein	A8ATI9	Listeria_phage	6.3e-27	94.4
WP_003731538.1\|1732412_1732859_-	hypothetical protein	A8ATI8	Listeria_phage	1.7e-63	95.9
WP_003731537.1\|1732834_1733281_-	hypothetical protein	A8ATI7	Listeria_phage	9.3e-73	97.3
WP_003731536.1\|1733468_1733810_-	hypothetical protein	A8ATI5	Listeria_phage	1.5e-43	93.5
WP_077625340.1\|1733815_1734544_-	hypothetical protein	A8ATI4	Listeria_phage	7.9e-130	93.0
WP_003731534.1\|1734565_1735207_-	hypothetical protein	A8ATI3	Listeria_phage	4.5e-113	99.1
WP_046811237.1\|1735196_1736348_-\|plate	baseplate J/gp47 family protein	A8ATI2	Listeria_phage	2.4e-165	77.0
WP_003731532.1\|1736340_1736703_-	DUF2634 domain-containing protein	A8ATI1	Listeria_phage	2.0e-41	70.0
WP_003731531.1\|1736699_1737038_-	hypothetical protein	A8ATI0	Listeria_phage	8.0e-53	92.0
WP_077426168.1\|1737038_1737845_-	hypothetical protein	A8ATH9	Listeria_phage	1.1e-129	85.4
WP_069019604.1\|1737850_1738222_-	hypothetical protein	A8ATH8	Listeria_phage	2.4e-50	78.7
WP_023559357.1\|1738221_1738770_-	LysM peptidoglycan-binding domain-containing protein	A8ATH7	Listeria_phage	5.4e-83	84.5
WP_069019629.1\|1738775_1743806_-	peptidoglycan DD-metalloendopeptidase family protein	A8ATH6	Listeria_phage	0.0e+00	78.2
WP_049961612.1\|1743982_1744339_-	hypothetical protein	A8ATH4	Listeria_phage	2.3e-58	97.5
WP_049961613.1\|1744391_1744790_-	hypothetical protein	A8ATH3	Listeria_phage	4.0e-67	99.2
WP_031648614.1\|1744806_1745802_-	DUF3383 family protein	A8ATH2	Listeria_phage	7.9e-181	99.1
WP_031648613.1\|1745806_1746289_-	hypothetical protein	A8ATH1	Listeria_phage	1.1e-82	96.9
WP_031648612.1\|1746278_1746653_-	hypothetical protein	A8ATH0	Listeria_phage	8.6e-64	96.8
WP_031648611.1\|1746652_1747252_-	hypothetical protein	A8ATG9	Listeria_phage	3.7e-109	98.5
WP_031648610.1\|1747251_1747587_-	DUF4054 domain-containing protein	A8ATG8	Listeria_phage	3.6e-53	99.1
WP_031648609.1\|1747598_1747985_-	hypothetical protein	A8ATG7	Listeria_phage	1.0e-59	92.2
WP_031648608.1\|1748007_1748913_-	encapsulin	A8ATG6	Listeria_phage	8.8e-163	98.0
WP_031648607.1\|1748933_1749386_-	hypothetical protein	A8ATG5	Listeria_phage	2.8e-69	93.3
WP_077625341.1\|1749385_1750495_-	DUF2213 domain-containing protein	A8ATG4	Listeria_phage	1.6e-174	99.5
WP_003731514.1\|1750543_1750714_-	hypothetical protein	A8ATG3	Listeria_phage	1.1e-26	100.0
WP_003731513.1\|1750710_1752120_-\|head	phage head morphogenesis protein	A8ATG2	Listeria_phage	7.8e-267	100.0
WP_003731512.1\|1752112_1753498_-	DUF1073 domain-containing protein	A8ATG1	Listeria_phage	1.1e-265	100.0
WP_003731511.1\|1753511_1754972_-\|terminase	phage terminase large subunit	A8ATG0	Listeria_phage	4.4e-289	100.0
WP_015987328.1\|1754949_1755834_-	TerS	A8ATF9	Listeria_phage	2.1e-140	100.0
WP_010990878.1\|1755879_1756104_-	hypothetical protein	A8ATN8	Listeria_phage	2.7e-36	100.0
WP_003731508.1\|1756131_1756362_-	hypothetical protein	A8ATN7	Listeria_phage	3.7e-33	98.7
WP_003731507.1\|1756491_1756689_-	hypothetical protein	A8ATN6	Listeria_phage	5.2e-28	100.0
WP_069029548.1\|1756736_1758074_-	ParB N-terminal domain-containing protein	A8ATN5	Listeria_phage	5.7e-243	94.2
WP_046811224.1\|1758146_1758623_-	hypothetical protein	A0A1P8BMT7	Lactococcus_phage	5.5e-07	30.2
WP_046811222.1\|1758936_1759704_-	phage antirepressor KilAC domain-containing protein	A8ATN0	Listeria_phage	9.8e-139	98.4
WP_003731502.1\|1759716_1760139_-	hypothetical protein	A8ATM9	Listeria_phage	6.3e-71	100.0
WP_046811221.1\|1760219_1760780_-	phage protein	A8ATM8	Listeria_phage	4.5e-101	95.7
WP_003731500.1\|1760791_1761043_-	DUF3850 domain-containing protein	A8ATM7	Listeria_phage	9.9e-40	95.2
WP_069029549.1\|1761392_1761728_-	hypothetical protein	A8ATZ5	Listeria_phage	4.6e-08	93.1
WP_061092529.1\|1761727_1761916_-	hypothetical protein	NA	NA	NA	NA
WP_069029551.1\|1762121_1762403_-	hypothetical protein	NA	NA	NA	NA
WP_003727764.1\|1762399_1762585_-	hypothetical protein	A0A059T5G1	Listeria_phage	4.1e-27	100.0
WP_069029552.1\|1762725_1762980_-	hypothetical protein	A0A059T6G3	Listeria_phage	9.7e-27	74.4
WP_176716633.1\|1762976_1763114_-	hypothetical protein	NA	NA	NA	NA
WP_069029553.1\|1763130_1764492_-	PcfJ domain-containing protein	A8ATM0	Listeria_phage	1.7e-189	71.7
WP_069029554.1\|1764488_1764911_-	hypothetical protein	A8ATL9	Listeria_phage	5.7e-48	74.3
WP_003731490.1\|1764927_1765104_-	hypothetical protein	A8ATL8	Listeria_phage	2.0e-23	100.0
WP_069029555.1\|1765063_1765444_-	hypothetical protein	A8ATL7	Listeria_phage	4.6e-65	94.4
WP_046811212.1\|1765484_1766105_-	hypothetical protein	A8ATL6	Listeria_phage	6.1e-107	98.1
WP_046811211.1\|1766124_1766562_-	RusA family crossover junction endodeoxyribonuclease	A8ATL5	Listeria_phage	8.5e-71	91.0
WP_046811210.1\|1766542_1766782_-	hypothetical protein	A8ATL4	Listeria_phage	3.6e-31	98.6
WP_046811277.1\|1766738_1766960_-	hypothetical protein	A8ATL3	Listeria_phage	1.2e-28	85.3
WP_041918379.1\|1766946_1767147_-	hypothetical protein	A8ATL2	Listeria_phage	4.0e-28	89.4
WP_031648583.1\|1767143_1767959_-	ATP-binding protein	A8ATL1	Listeria_phage	4.1e-143	99.3
WP_069029556.1\|1767882_1768803_-	DUF4373 domain-containing protein	A8ATL0	Listeria_phage	5.8e-162	95.8
WP_077426163.1\|1768814_1769552_-	MBL fold metallo-hydrolase	A8ATK9	Listeria_phage	5.9e-133	97.6
WP_003731480.1\|1769511_1770297_-	phage recombination protein Bet	A8ATK8	Listeria_phage	7.9e-144	100.0
WP_077625342.1\|1770297_1772241_-	AAA family ATPase	A8ATK7	Listeria_phage	0.0e+00	97.7
WP_069019739.1\|1772227_1772569_-	hypothetical protein	A8ATK6	Listeria_phage	2.3e-55	98.2
WP_077625343.1\|1772586_1772814_-	hypothetical protein	A8ATK5	Listeria_phage	1.9e-29	92.0
WP_061092501.1\|1772994_1773279_-	hypothetical protein	A8ATK4	Listeria_phage	5.4e-26	54.2
WP_176715291.1\|1773428_1773593_-	hypothetical protein	A8ATK3	Listeria_phage	1.0e-08	58.5
WP_069019742.1\|1773757_1774282_-	hypothetical protein	A8ATK1	Listeria_phage	1.2e-76	80.5
WP_069019745.1\|1774376_1774565_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_069019748.1\|1774711_1775140_+	helix-turn-helix transcriptional regulator	A8ATJ9	Listeria_phage	4.7e-50	69.7
WP_069019751.1\|1775156_1775576_+	ImmA/IrrE family metallo-endopeptidase	A8ATJ8	Listeria_phage	8.7e-65	83.2
WP_077625383.1\|1775628_1776642_+	DUF4064 domain-containing protein	A0A0S2MVJ2	Bacillus_phage	8.7e-18	50.0
WP_069019758.1\|1776720_1778136_+	recombinase family protein	A0A1L2JY12	Aeribacillus_phage	8.5e-112	45.6
WP_003727525.1\|1778452_1778848_+	helix-turn-helix transcriptional regulator	A9D9J6	Lactobacillus_prophage	1.3e-14	57.4
WP_003727526.1\|1778927_1780067_+\|protease	PrsW family intramembrane metalloprotease	NA	NA	NA	NA
WP_003727527.1\|1780213_1781044_+	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	3.6e-46	42.0
WP_003727528.1\|1781027_1782275_+	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	1.6e-106	52.0
WP_009918133.1\|1782299_1783214_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_003726717.1\|1783402_1783867_+	hypothetical protein	NA	NA	NA	NA
WP_003727530.1\|1783905_1784367_-	NUDIX hydrolase	NA	NA	NA	NA
WP_003727531.1\|1784484_1785969_+	PTS system trehalose-specific EIIBC component	NA	NA	NA	NA
WP_003727532.1\|1785987_1787634_+	alpha,alpha-phosphotrehalase	NA	NA	NA	NA
WP_003726055.1\|1787664_1788378_-	trehalose operon repressor	NA	NA	NA	NA
WP_003723553.1\|1788528_1788666_+	hypothetical protein	NA	NA	NA	NA
WP_003726054.1\|1788996_1789845_+	YitT family protein	NA	NA	NA	NA
WP_003726053.1\|1789911_1790106_+	hypothetical protein	NA	NA	NA	NA
WP_003726052.1\|1790145_1790805_-	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA
WP_003726051.1\|1791009_1792215_+	MFS transporter	NA	NA	NA	NA
WP_003726050.1\|1792211_1792457_+	hypothetical protein	NA	NA	NA	NA
WP_003727535.1\|1792494_1792971_-	8-oxo-dGTP diphosphatase	NA	NA	NA	NA
WP_003726048.1\|1793138_1793402_-	DUF3116 family protein	NA	NA	NA	NA
WP_003726047.1\|1793426_1794839_-	ATP-dependent RNA helicase DbpA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	4.9e-51	32.0
WP_003727536.1\|1794963_1795224_+	hypothetical protein	NA	NA	NA	NA
WP_003727537.1\|1795255_1795855_-	histidine phosphatase family protein	A0A1X9IGJ2	Lactococcus_phage	1.3e-29	41.0
WP_077625344.1\|1796019_1796427_+	glyoxalase/bleomycin resistance/extradiol dioxygenase family protein	NA	NA	NA	NA
WP_003726043.1\|1796563_1797157_+	YdeI/OmpD-associated family protein	NA	NA	NA	NA
WP_003727539.1\|1797199_1798558_-	DUF1254 domain-containing protein	NA	NA	NA	NA
WP_077625345.1\|1798680_1802598_-	MucBP domain-containing protein	NA	NA	NA	NA
1803063:1803086	attL	NA	NA	NA	NA
WP_003726932.1\|1803265_1803628_-	hypothetical protein	NA	NA	NA	NA
WP_003726037.1\|1803733_1804207_-	hypothetical protein	NA	NA	NA	NA
WP_010989939.1\|1805087_1805321_-	hypothetical protein	A0A059T6E1	Listeria_phage	8.9e-35	93.5
WP_003731277.1\|1805622_1805856_+	hypothetical protein	A8ATW9	Listeria_phage	4.3e-13	100.0
WP_003731276.1\|1805887_1806139_+	hypothetical protein	A8ATW8	Listeria_phage	2.0e-40	100.0
WP_003731275.1\|1806139_1806589_+	anti-CRISPR protein AcrIIA1	A8ATW7	Listeria_phage	2.0e-75	98.7
WP_039120634.1\|1807180_1807570_-	hypothetical protein	NA	NA	NA	NA
WP_003750018.1\|1807566_1807920_-	hypothetical protein	NA	NA	NA	NA
WP_075702241.1\|1807916_1808435_-	hypothetical protein	NA	NA	NA	NA
WP_077625347.1\|1808920_1809766_-	M15 family metallopeptidase	A0A059T7Y8	Listeria_phage	8.6e-136	92.6
WP_031668020.1\|1809762_1810032_-\|holin	phage holin	A0A059T684	Listeria_phage	2.6e-38	94.3
WP_064614890.1\|1810031_1810334_-	hypothetical protein	A0A059T5E6	Listeria_phage	7.7e-39	94.0
WP_077625348.1\|1810383_1811478_-	carbohydrate-binding protein CenC	A0A059T7R4	Listeria_phage	5.6e-188	89.3
WP_077625349.1\|1811467_1813762_-\|tail	phage tail protein	A0A059T7Y6	Listeria_phage	0.0e+00	98.4
WP_077625350.1\|1813777_1815427_-\|tail	phage tail family protein	A0A059T682	Listeria_phage	0.0e+00	98.0
WP_077625351.1\|1815423_1820340_-\|tail	phage tail tape measure protein	A0A059T5F4	Listeria_phage	0.0e+00	95.4
WP_014930919.1\|1820355_1820505_-	hypothetical protein	A0A059T6F4	Listeria_phage	2.3e-20	100.0
WP_031641717.1\|1820555_1820888_-	hypothetical protein	A0A059T7R2	Listeria_phage	3.0e-52	98.2
WP_014929552.1\|1820958_1821546_-\|tail	phage tail protein	A0A059T7Y4	Listeria_phage	2.9e-106	98.5
WP_014929551.1\|1821566_1821950_-	hypothetical protein	A0A059T681	Listeria_phage	2.3e-64	95.3
WP_077625352.1\|1821946_1822348_-	hypothetical protein	A8ATA2	Listeria_phage	2.3e-67	97.0
WP_077625353.1\|1822344_1822710_-\|head,tail	phage head-tail adapter protein	A0A059T6F2	Listeria_phage	2.9e-64	99.2
WP_009934007.1\|1822693_1822993_-	hypothetical protein	A8ATA0	Listeria_phage	9.9e-47	98.0
WP_176716059.1\|1823002_1823173_-	hypothetical protein	A0A059T7Y2	Listeria_phage	3.1e-21	98.2
WP_014929546.1\|1823179_1824331_-\|capsid	phage major capsid protein	A0A059T678	Listeria_phage	2.4e-213	99.5
WP_014929545.1\|1824357_1825155_-\|protease	Clp protease ClpP	A0A059T5F2	Listeria_phage	6.8e-143	98.9
WP_014929544.1\|1825151_1826282_-\|portal	phage portal protein	A0A059T6F0	Listeria_phage	1.9e-215	100.0
WP_077625354.1\|1826293_1827937_-\|terminase	terminase large subunit	A0A059T7Q8	Listeria_phage	0.0e+00	99.6
WP_012951543.1\|1827933_1828290_-\|terminase	P27 family phage terminase small subunit	A0A059T7Y1	Listeria_phage	2.0e-46	98.0
WP_060577744.1\|1828338_1828653_-	HNH endonuclease	A8ATF8	Listeria_phage	1.1e-56	98.1
WP_023548932.1\|1828652_1828979_-	hypothetical protein	A0A059T5G5	Listeria_phage	3.2e-54	97.2
WP_003747284.1\|1829538_1829964_-	DUF722 domain-containing protein	Q8W5V4	Listeria_phage	5.0e-68	92.2
WP_003731655.1\|1829976_1830204_-	hypothetical protein	NA	NA	NA	NA
WP_003731656.1\|1830264_1830420_-	hypothetical protein	NA	NA	NA	NA
WP_003731657.1\|1830448_1830718_-	hypothetical protein	NA	NA	NA	NA
WP_031644593.1\|1830714_1831254_-	DUF3310 domain-containing protein	A8ATF5	Listeria_phage	2.7e-74	77.1
WP_003731659.1\|1831701_1831914_-	hypothetical protein	NA	NA	NA	NA
WP_012951539.1\|1831915_1832233_-	VRR-NUC domain-containing protein	A8ATF4	Listeria_phage	7.3e-48	89.3
WP_077625355.1\|1832521_1834795_-	DNA primase	R4IBW2	Listeria_phage	0.0e+00	99.1
WP_038330175.1\|1834817_1835303_-	DUF669 domain-containing protein	R4ICE5	Listeria_phage	2.9e-88	100.0
WP_097665292.1\|1835325_1836582_-	DEAD/DEAH box helicase	R4IBK4	Listeria_phage	1.7e-228	98.7
WP_077625356.1\|1836645_1837335_-	AAA family ATPase	R4IDY8	Listeria_phage	2.8e-129	98.7
WP_039380420.1\|1837354_1837834_-	siphovirus Gp157 family protein	R4IBM0	Listeria_phage	9.3e-79	99.4
WP_003731666.1\|1837837_1838215_-	hypothetical protein	A8ATE8	Listeria_phage	8.7e-40	65.4
WP_003731667.1\|1838211_1838385_-	hypothetical protein	Q8W5W3	Listeria_phage	6.8e-24	100.0
WP_003731670.1\|1838718_1838985_-	hypothetical protein	NA	NA	NA	NA
WP_031641705.1\|1838974_1839205_-	hypothetical protein	NA	NA	NA	NA
WP_003731672.1\|1839201_1839435_-	hypothetical protein	NA	NA	NA	NA
WP_061107348.1\|1839431_1839893_-	hypothetical protein	D9J0I6	Brochothrix_phage	7.7e-14	30.6
WP_077625357.1\|1839889_1840153_-	hypothetical protein	NA	NA	NA	NA
WP_077625358.1\|1840149_1840374_-	hypothetical protein	R4IBJ7	Listeria_phage	4.8e-30	82.4
WP_077625359.1\|1840367_1840919_-	DUF1642 domain-containing protein	A8ATD8	Listeria_phage	1.7e-28	40.9
WP_077625360.1\|1840929_1842000_-	DNA cytosine methyltransferase	A0A1X9I6Y5	Streptococcus_phage	3.5e-142	64.7
WP_077625361.1\|1841996_1842179_-	hypothetical protein	NA	NA	NA	NA
WP_009929539.1\|1842699_1842885_-	hypothetical protein	A0A059T7Z3	Listeria_phage	1.7e-28	96.7
WP_026747303.1\|1842887_1843130_-	hypothetical protein	A8ATD2	Listeria_phage	6.0e-42	96.2
WP_003730995.1\|1843151_1843343_-	helix-turn-helix transcriptional regulator	A0A059T5F8	Listeria_phage	5.4e-22	87.1
WP_003730994.1\|1843409_1843613_+	hypothetical protein	NA	NA	NA	NA
WP_012951519.1\|1844013_1844337_+	helix-turn-helix transcriptional regulator	R4IDX0	Listeria_phage	6.3e-39	75.7
WP_026747145.1\|1844353_1844806_+	ImmA/IrrE family metallo-endopeptidase	R4IBK9	Listeria_phage	9.1e-76	87.3
WP_014930257.1\|1844857_1845721_+	hypothetical protein	NA	NA	NA	NA
WP_031646809.1\|1845850_1847005_+\|integrase	site-specific integrase	A0A059T688	Listeria_phage	1.3e-214	97.9
1847023:1847046	attR	NA	NA	NA	NA

DBSCAN-SWA_6

1958833 : 1966255

Hokovirus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_077625364.1\|1958833_1960390_-	glutamine-hydrolyzing GMP synthase	A0A1V0SH76	Hokovirus	2.3e-17	28.1
WP_009917597.1\|1960518_1960923_-	PTS sugar transporter subunit IIB	NA	NA	NA	NA
WP_003724634.1\|1960982_1961291_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
WP_003727000.1\|1961303_1962128_-	ammonia-dependent NAD(+) synthetase	G3MA24	Bacillus_virus	9.7e-68	52.6
WP_003721509.1\|1962139_1963630_-	nicotinate phosphoribosyltransferase	G3MA18	Bacillus_virus	9.5e-114	49.7
WP_003727001.1\|1963838_1964852_-	glycosyltransferase	A0A1V0SAH6	Catovirus	1.8e-10	31.2
WP_003727002.1\|1964866_1965850_-	glycosyltransferase family 2 protein	A0A1V0SAH6	Catovirus	2.0e-11	33.8
WP_003727003.1\|1965871_1966255_-	glycerol-3-phosphate cytidylyltransferase	A0A1V0SGE7	Hokovirus	8.1e-17	40.7

DBSCAN-SWA_7

2932246 : 2938773

Streptococcus_pyogenes_phage(33.33%)

tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003728210.1\|2932246_2933065_-\|tail	phage tail family protein	A0A060AFE1	Staphylococcus_phage	9.4e-39	35.0
WP_003728211.1\|2933061_2934930_-	hypothetical protein	A0A097PAU2	Streptococcus_pyogenes_phage	4.5e-20	45.8
WP_003740367.1\|2934916_2935321_-	hypothetical protein	NA	NA	NA	NA
WP_003721745.1\|2935362_2935665_-	hypothetical protein	NA	NA	NA	NA
WP_003721744.1\|2935712_2936225_-\|tail	phage major tail protein, TP901-1 family	A0A097PBF4	Streptococcus_pyogenes_phage	1.2e-47	62.7
WP_003728212.1\|2936237_2936627_-	DUF5072 family protein	NA	NA	NA	NA
WP_003728213.1\|2936906_2937323_-	hypothetical protein	A8ASQ1	Listeria_phage	3.2e-19	37.9
WP_003724946.1\|2937334_2937763_-	hypothetical protein	NA	NA	NA	NA
WP_003721740.1\|2937979_2938315_+	helix-turn-helix transcriptional regulator	A0A2H4JAR9	uncultured_Caudovirales_phage	4.0e-20	52.5
WP_003728215.1\|2938320_2938773_+	ImmA/IrrE family metallo-endopeptidase	A0A059T7S0	Listeria_phage	4.0e-31	47.9

Anti-CRISPR protein detection

Acr_ID: NZ_CP019615.1|WP_003731276.1|324636_324888_-|hypothetical-protein

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Acr_ID: NZ_CP019615.1|WP_003731276.1|1805887_1806139_+|hypothetical-protein

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Acr_ID: NZ_CP019615.1|WP_176715291.1|1773428_1773593_-|hypothetical-protein

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Acr_ID: NZ_CP019615.1|WP_069019742.1|1773757_1774282_-|hypothetical-protein

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Acr_ID: NZ_CP019615.1|WP_003723553.1|1788528_1788666_+|hypothetical-protein

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Acr_ID: NZ_CP019615.1|WP_003726053.1|1789911_1790106_+|hypothetical-protein

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Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_CP019615.1|WP_003731276.1|324636_324888_-|hypothetical-protein

324636_324888_-

83 aa aa

AcrIIA12

hit_Aca_id	identity	query_coverage	hit_coverage
anti_CRISPR3641\|WP_003731276.1\|AcrIIA12\|II-A\|Verified\|Listeria-monocytogenes	1.0	1	1.0

285895-325153

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_CP019615_1	TypeII	1.28\|274208\|30\|NZ_CP019615\|CRISPRCasFinder,CRT,PILER-CR	274208-274237	30	297594-297623	0

1. spacer 1.28|274208|30|NZ_CP019615|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019615 position: 297594-297623, mismatch: 0

ttgatgagaatctatacaggtacttaaccg	CRISPR spacer
ttgatgagaatctatacaggtacttaaccg	Protospacer
******************************

NZ_CP019615.1|WP_003731276.1|1805887_1806139_+|hypothetical-protein

1805887_1806139_+

83 aa aa

AcrIIA12

hit_Aca_id	identity	query_coverage	hit_coverage
anti_CRISPR3641\|WP_003731276.1\|AcrIIA12\|II-A\|Verified\|Listeria-monocytogenes	1.0	1	1.0

1673361-1847005

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_CP019615_1	TypeII	1.22\|273812\|30\|NZ_CP019615\|CRISPRCasFinder,CRT,PILER-CR	273812-273841	30	1751104-1751075	2

1. spacer 1.22|273812|30|NZ_CP019615|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019615 position: 1751104-1751075, mismatch: 2

taataaacaagaaatattacttcatgaatc	CRISPR spacer
taataaacaagaaatattgcttcacgaatc	Protospacer
******************.*****.*****

NZ_CP019615.1|WP_176715291.1|1773428_1773593_-|hypothetical-protein

1773428_1773593_-

54 aa aa

HTH_3,HTH_XRE

Identity	Hit_domain_coverage
0.4827586206896552	1.0

1673361-1847005

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_CP019615_1	TypeII	1.22\|273812\|30\|NZ_CP019615\|CRISPRCasFinder,CRT,PILER-CR	273812-273841	30	1751104-1751075	2

1. spacer 1.22|273812|30|NZ_CP019615|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019615 position: 1751104-1751075, mismatch: 2

taataaacaagaaatattacttcatgaatc	CRISPR spacer
taataaacaagaaatattgcttcacgaatc	Protospacer
******************.*****.*****

NZ_CP019615.1|WP_069019742.1|1773757_1774282_-|hypothetical-protein

1773757_1774282_-

174 aa aa

HTH_3,HTH_XRE

Identity	Hit_domain_coverage
0.4827586206896552	1.0

1673361-1847005

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_CP019615_1	TypeII	1.22\|273812\|30\|NZ_CP019615\|CRISPRCasFinder,CRT,PILER-CR	273812-273841	30	1751104-1751075	2

1. spacer 1.22|273812|30|NZ_CP019615|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019615 position: 1751104-1751075, mismatch: 2

taataaacaagaaatattacttcatgaatc	CRISPR spacer
taataaacaagaaatattgcttcacgaatc	Protospacer
******************.*****.*****

NZ_CP019615.1|WP_003723553.1|1788528_1788666_+|hypothetical-protein

1788528_1788666_+

45 aa aa

WHTH_GntR

Identity	Hit_domain_coverage
0.4	0.9090909090909091

1673361-1847005

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_CP019615_1	TypeII	1.22\|273812\|30\|NZ_CP019615\|CRISPRCasFinder,CRT,PILER-CR	273812-273841	30	1751104-1751075	2

1. spacer 1.22|273812|30|NZ_CP019615|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019615 position: 1751104-1751075, mismatch: 2

taataaacaagaaatattacttcatgaatc	CRISPR spacer
taataaacaagaaatattgcttcacgaatc	Protospacer
******************.*****.*****

NZ_CP019615.1|WP_003726053.1|1789911_1790106_+|hypothetical-protein

1789911_1790106_+

64 aa aa

WHTH_GntR

Identity	Hit_domain_coverage
0.4	0.9090909090909091

1673361-1847005

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_CP019615_1	TypeII	1.22\|273812\|30\|NZ_CP019615\|CRISPRCasFinder,CRT,PILER-CR	273812-273841	30	1751104-1751075	2

1. spacer 1.22|273812|30|NZ_CP019615|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019615 position: 1751104-1751075, mismatch: 2

taataaacaagaaatattacttcatgaatc	CRISPR spacer
taataaacaagaaatattgcttcacgaatc	Protospacer
******************.*****.*****

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP019615

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

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