CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_NVYQ01000116	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00116, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000177	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00177, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000188	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00188, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000193	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00193, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000142	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00142, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000240	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00240, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000037	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00037, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000275	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00278, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000096	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00096, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000047	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00047, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000258	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00258, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000236	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00236, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000034	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00034, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000281	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00284, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000110	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00110, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000166	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00166, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000222	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00222, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000248	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00248, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000051	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00051, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000282	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00285, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000012	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00012, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000004	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00004, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000011	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00011, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000131	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00131, whole genome shotgun sequence	2 crisprs	NA	0	0	0	0
NZ_NVYQ01000241	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00241, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000233	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00233, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000256	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00256, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000227	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00227, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000023	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00023, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000191	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00191, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000225	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00225, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000167	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00167, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000061	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00061, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000211	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00211, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000190	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00190, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000245	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00245, whole genome shotgun sequence	1 crisprs	NA	1	1	0	0
NZ_NVYQ01000220	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00220, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000038	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00038, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000109	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00109, whole genome shotgun sequence	0 crisprs	DEDDh	0	0	0	0
NZ_NVYQ01000153	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00153, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000020	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00020, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000006	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00006, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000203	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00203, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000064	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00064, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000226	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00226, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000043	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00043, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000026	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00026, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000052	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00052, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000080	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00080, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000235	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00235, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000183	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00183, whole genome shotgun sequence	0 crisprs	DEDDh	0	0	0	0
NZ_NVYQ01000088	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00088, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000016	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00016, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000056	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00056, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000094	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00094, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000163	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00163, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000093	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00093, whole genome shotgun sequence	2 crisprs	cas2,cas1,cas9	3	6	0	0
NZ_NVYQ01000098	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00098, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000065	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00065, whole genome shotgun sequence	1 crisprs	NA	1	0	0	0
NZ_NVYQ01000277	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00280, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000251	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00251, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000069	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00069, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000054	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00054, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000039	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00039, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000119	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00119, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000270	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00272, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000169	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00169, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000087	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00087, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000132	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00132, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000162	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00162, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000040	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00040, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000144	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00144, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000260	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00260, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000278	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00281, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000007	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00007, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000283	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00286, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000216	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00216, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000189	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00189, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000053	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00053, whole genome shotgun sequence	1 crisprs	NA	0	0	0	0
NZ_NVYQ01000148	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00148, whole genome shotgun sequence	1 crisprs	NA	0	0	0	0
NZ_NVYQ01000105	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00105, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000055	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00055, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000138	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00138, whole genome shotgun sequence	1 crisprs	NA	1	0	0	0
NZ_NVYQ01000066	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00066, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000269	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00271, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000041	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00041, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000272	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00274, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000263	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00264, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000215	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00215, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000010	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00010, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000261	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00261, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000102	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00102, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000158	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00158, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000071	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00071, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000009	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00009, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000059	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00059, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000242	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00242, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000025	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00025, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000181	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00181, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000111	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00111, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000079	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00079, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000027	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00027, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000178	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00178, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000285	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00290, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000048	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00048, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000175	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00175, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000074	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00074, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000243	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00243, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000221	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00221, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000198	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00198, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000112	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00112, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000115	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00115, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000031	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00031, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000125	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00125, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000155	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00155, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000271	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00273, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000184	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00184, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000223	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00223, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000206	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00206, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000121	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00121, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000160	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00160, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000036	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00036, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000018	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00018, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000089	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00089, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000134	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00134, whole genome shotgun sequence	1 crisprs	NA	1	1	0	0
NZ_NVYQ01000217	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00217, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000280	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00283, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000106	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00106, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000229	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00229, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000210	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00210, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000085	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00085, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000266	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00267, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000101	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00101, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000140	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00140, whole genome shotgun sequence	0 crisprs	DEDDh	0	0	0	0
NZ_NVYQ01000274	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00277, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000214	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00214, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000097	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00097, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000252	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00252, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000237	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00237, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000156	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00156, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000174	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00174, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000192	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00192, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000035	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00035, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000058	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00058, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000135	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00135, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000022	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00022, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000099	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00099, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000173	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00173, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000205	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00205, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000164	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00164, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000146	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00146, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000250	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00250, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000067	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00067, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000014	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00014, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000149	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00149, whole genome shotgun sequence	0 crisprs	NA	0	0	1	0
NZ_NVYQ01000077	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00077, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000197	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00197, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000046	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00046, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000273	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00276, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000008	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00008, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000136	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00136, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000265	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00266, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000247	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00247, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000244	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00244, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000255	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00255, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000075	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00075, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000003	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00003, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000050	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00050, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000207	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00207, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000049	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00049, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000107	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00107, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000015	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00015, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000249	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00249, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000019	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00019, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000095	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00095, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000090	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00090, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000045	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00045, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000083	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00083, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000208	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00208, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000114	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00114, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000044	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00044, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000137	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00137, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000076	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00076, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000152	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00152, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000238	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00238, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000100	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00100, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000073	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00073, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000104	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00104, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000262	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00262, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000182	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00182, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000267	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00269, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000141	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00141, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000129	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00129, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000013	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00013, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000254	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00254, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000124	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00124, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000130	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00130, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000021	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00021, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000228	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00228, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000033	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00033, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000199	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00199, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000212	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00212, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000218	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00218, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000120	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00120, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000081	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00081, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000113	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00113, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000123	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00123, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000176	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00176, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000042	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00042, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000201	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00201, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000157	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00157, whole genome shotgun sequence	0 crisprs	cas3	0	0	0	0
NZ_NVYQ01000133	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00133, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000231	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00231, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000126	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00126, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000072	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00072, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000084	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00084, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000179	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00179, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000002	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00002, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000234	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00234, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000200	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00200, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000264	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00265, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000159	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00159, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000204	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00204, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000118	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00118, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000091	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00091, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000284	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00288, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000268	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00270, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000057	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00057, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000239	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00239, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000170	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00170, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000005	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00005, whole genome shotgun sequence	1 crisprs	NA	0	0	0	0
NZ_NVYQ01000185	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00185, whole genome shotgun sequence	0 crisprs	csa3	0	0	0	0
NZ_NVYQ01000001	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00001, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000259	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00259, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000187	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00187, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000276	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00279, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000186	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00186, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000194	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00194, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000172	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00172, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000195	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00195, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000224	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00224, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000209	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00209, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000024	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00024, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000165	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00165, whole genome shotgun sequence	2 crisprs	NA	2	0	0	0
NZ_NVYQ01000122	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00122, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000145	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00145, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000279	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00282, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000196	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00196, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000108	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00108, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000139	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00139, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000253	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00253, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000062	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00062, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000202	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00202, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000117	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00117, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000230	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00230, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000063	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00063, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000103	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00103, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000086	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00086, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000219	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00219, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000127	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00127, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000161	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00161, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000232	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00232, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000246	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00246, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000032	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00032, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000078	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00078, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000147	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00147, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000257	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00257, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000171	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00171, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000060	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00060, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000180	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00180, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000150	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00150, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000068	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00068, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000017	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00017, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000070	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00070, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000030	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00030, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000029	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00029, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000092	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00092, whole genome shotgun sequence	1 crisprs	NA	3	9	0	0
NZ_NVYQ01000143	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00143, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000082	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00082, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000168	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00168, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000213	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00213, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000154	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00154, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000028	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00028, whole genome shotgun sequence	0 crisprs	NA	0	0	1	3
NZ_NVYQ01000128	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00128, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_NVYQ01000151	Neisseria meningitidis strain MRSN431200 MRSN431200_contig00151, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

114 : 7579

Mannheimia_phage(33.33%)

transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002236955.1\|114_633_-	host-nuclease inhibitor Gam family protein	F6MIJ0	Haemophilus_phage	5.4e-32	48.8
WP_002218403.1\|647_875_-	hypothetical protein	NA	NA	NA	NA
WP_180300001.1\|938_1106_-	hypothetical protein	NA	NA	NA	NA
WP_025460644.1\|1564_1789_-	hypothetical protein	NA	NA	NA	NA
WP_025457345.1\|1816_2059_-	toxin PIN	A0A0M3LSX3	Mannheimia_phage	4.0e-06	45.3
WP_025460373.1\|2074_2989_-	AAA family ATPase	A0A2D1GNS0	Pseudomonas_phage	2.5e-56	41.5
WP_025460374.1\|3203_5180_-\|transposase	Mu transposase C-terminal domain-containing protein	A0A0M3LPN5	Mannheimia_phage	8.5e-118	42.0
WP_002232388.1\|5181_5433_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_025460375.1\|5476_6376_+	transcriptional regulator	NA	NA	NA	NA
WP_072104465.1\|6542_6755_+	helix-turn-helix transcriptional regulator	A5X9F5	Aeromonas_virus	4.6e-06	45.9
WP_180300750.1\|6976_7579_+	ATP-binding cassette domain-containing protein	A0A2H4UU96	Bodo_saltans_virus	8.8e-10	27.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

4. NZ_NVYQ01000267

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

5. NZ_NVYQ01000053

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CRISPR-Cas detection and classification

Crispr_ID: NZ_NVYQ01000053_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_NVYQ01000053_1

3578-3684

Orphan

Consensus_repeat	Method
TTTATCGGAAATGACCGAAACTCAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_NVYQ01000053_1

>merge|NZ_NVYQ01000053|1|3578-3684|CRISPRCasFinder
TTTATCGGAAATGACCGAAACTCAACGAACCTGAATTCCCGCTTTCGAGGGAATGACGGGGGTGTGGCGGGAATGACGGAGGTTTATCAGAAATGACCGAAACTCAA

>NZ_NVYQ01000053|1|1|3578-3684|CRISPRCasFinder
TTTATCGGAAATGACCGAAACTCAA	CGAACCTGAATTCCCGCTTTCGAGGGAATGACGGGGGTGTGGCGGGAATGACGGAGG
TTTATCAGAAATGACCGAAACTCAA

Protein	Function_ID	Function_description	E-value
NZ_NVYQ01000053.1\|WP_002228911.1\|5183_6401_-\|MFS-transporter	gnl\|CDD\|340913	cd17355, MFS_YcxA_like, MFS-type transporter YcxA and similar proteins of the Major Facilitator Superfamily of transporters. This group is composed of uncharacterized bacterial MFS-type transporters including Bacillus subtilis YcxA and YbfB. YcxA has been shown to facilitate the export of surfactin in B. subtilis. The YcxA-like group belongs to the Monocarboxylate transporter -like (MCT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.26969e-70
NZ_NVYQ01000053.1\|WP_024496843.1\|3700_4828_-\|glycosyltransferase-family-4-protein	gnl\|CDD\|340837	cd03808, GT4_CapM-like, capsular polysaccharide biosynthesis glycosyltransferase CapM and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases. CapM in Staphylococcus aureus is required for the synthesis of type 1 capsular polysaccharides.	2.21279e-135
NZ_NVYQ01000053.1\|WP_002221625.1\|252_1767_-\|catalase-KatA	gnl\|CDD\|163712	cd08156, catalase_clade_3, Clade 3 of the heme-binding enzyme catalase. Catalase is a ubiquitous enzyme found in both prokaryotes and eukaryotes, which is involved in the protection of cells from the toxic effects of peroxides. It catalyzes the conversion of hydrogen peroxide to water and molecular oxygen. Catalases also utilize hydrogen peroxide to oxidize various substrates such as alcohol or phenols. Clade 3 catalases are the most abundant subfamily and are found in all three kingdoms of life; they have a relatively small subunit size of 43 to 75 kDa, and bind a protoheme IX (heme b) group buried deep inside the structure. Clade 3 catalases also bind NADPH as a second redox-active cofactor. They form tetramers, and in eukaryotic cells, catalases are located in peroxisomes.	0
NZ_NVYQ01000053.1\|WP_002218621.1\|2114_2966_+\|RNA-polymerase-sigma-54-factor	gnl\|CDD\|224425	COG1508, RpoN, DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog [Transcription].	6.04701e-77

>NZ_NVYQ01000053.1|WP_002218621.1|2114_2966_+|RNA-polymerase-sigma-54-factor
MTLLGIKLKQTQQLNQRLQQSLRVLQMSGIELEREVENWLSDNPLLERKDTDEFSDAEFSHYTAPARQIGGDEGEDMLSNIAGEQDFKQYLHAQVCEHPLSDQESACVHILIDFLDEQGYLTDSIEDILDHTPLEWMLDEAMLKQALTALKKFDPAGVAAADLNESLILQIERSGECAAKPSALHIVRNALDSIDGNRSQTLARIKKRLPQTDSGTLEAALDLIASLNPFPAAGFASSTPTPYSDEALANLLAFRGMEVSRRTIAKYRESFEIPAAHKRKTAE
>NZ_NVYQ01000053.1|WP_002221625.1|252_1767_-|catalase-KatA
MTTSKCPVTHLTMNNGAPVADNQNSLTAGPRGPLLAQDLWLNEKLADFVREVIPERRMHAKGSGAFGTFTVTHDITKYTRAKIFSEVGKKTEMFARFTTVAGERGAADAERDIRGFALKFYTEEGNWDVVGNNTPVFFLRDPRKFPDLNKAVKRDPRTNMRSATNNWDFWTLLPEALHQVTIVMSDRGIPAGYRHMHGFGSHTYSFWNEAGERFWVKFHFRTQQGIKNLTNEEAAKIIADDRESHQRDLYEAIERGEFPKWTMYIQVMPEADAEKVPYHPFDLTKVWPKKDYPLIEVGEFELNRNPENFFADVEQSAFAPSNLVPGIGASPDKMLQARLFNYADAQRYRLGVNFRQIPVNRPRCPVHSNQRDGQGRADGNYGSLPHYEPNSFGQWQQQPDFAEPPLKINGDAAHWDYRQDDDDYFSQPRALFNLMNDAQKQALFGNTAAAMGDAPDFIKYRHIRNCYRCDPAYGEGVAKALGLTVEDAQAARATDPALGQPGLL
>NZ_NVYQ01000053.1|WP_181965974.1|0_177_-|hypothetical-protein
MPSETSFDRFRRHFYTPPPPFQWAFFIKRKISRHSRPTAHFSAVIPAPSPPVQTGTKTF
>NZ_NVYQ01000053.1|WP_024496843.1|3700_4828_-|glycosyltransferase-family-4-protein
MKIVFITTVASSIYGFRAPVIKKLIGKNHQVYAFVSEFSDNELDIIREMGVTPVTYRSNRSGLNPFSDIKSTFLIFKELKKISPDLVFPYFAKPVIFGTFAAKLAGVPRIVGMLEGLGFAFTPQLEGIPLKTKIIKGILIALYRIALPMLESLIVLNPDDKDDLLHQYGIKIKNIHILGGIGLDLRQYPYSEADIPDEKEPVKFLFIGRLLKEKGIDEFIRAAEQVKDKYPDTVFTALGAIDKSRGGGGDLERLIARDIIRFPGFVNNVSEVIKAHHIFVLPSYREGVPRSTQEAMAVGRAVITTDVPGCRETVADKVNGFLIEPWNPRILAEKMIYFIENREAVRLMGNASYAIAKDKFDAEKVDLKLLDILKA
>NZ_NVYQ01000053.1|WP_153308412.1|4840_4981_+|hypothetical-protein
MNYRIGNAVCIDEMPDTGRGGQTFAKRTASDASPARAGAASDGILS
>NZ_NVYQ01000053.1|WP_002228911.1|5183_6401_-|MFS-transporter
MTHTASKTPKFWLTITAAAFILLITIGMRMTLGLFVQPVVNTTELSIAQFSLIIAVFQLMWGISQPLSGALADRFGAFRVLSGGAVLLVCACLIAPNIPTYWGLMIAVGLLLAFGTGSGGFSIIMGQVAAQVPAHKRGLASGLVNAGGSAGQFLFAPLVQGLVVLPEVGWTGTFYVWGAIALLILPVSWWLAGGNNAAHTQHAQATHGQSLGEAVKTAFKTPSYILLHLSFFACGFHIAFLVTHLPTEVALCGLPATVASTSIAIIGLANIAGCIFSGWCTSRVRGKYVLFGLYASRAAMILIYIFSPKTDLNFYIFAAALGFTWLATVTPTASITGKLFGTRYLATLFGLTMLSHQIGGFLGSYIGGIVITQFGDYGWMWYADALLAGTAALLNLPIREPRTAA

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

6. NZ_NVYQ01000176

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

7. NZ_NVYQ01000254

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

8. NZ_NVYQ01000284

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

9. NZ_NVYQ01000138

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CRISPR-Cas detection and classification

Crispr_ID: NZ_NVYQ01000138_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_NVYQ01000138_1

26111-26286

Orphan

I-E

Consensus_repeat	Method
CTAGATTCCCACTTTCGTGGGAATGACGG	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_NVYQ01000138_1

>merge|NZ_NVYQ01000138|1|26111-26286|CRISPRCasFinder
CTAGATTCCCACTTTCGTGGGAATGACGGGATTTAAGTTTCAAAATTTATTCTAAATAACTGAAACTCAACGAACTAGATTCCCACTTTCGTGGGAATGACGGCATCAGTCTGCCGTTTACAGCACGGTTTCTTTAGATTTTACGTTCTAGATTCCCGCCTGCGCGGGAATGACGA

>NZ_NVYQ01000138|1|1|26111-26286|CRISPRCasFinder
CTAGATTCCCACTTTCGTGGGAATGACGG	GATTTAAGTTTCAAAATTTATTCTAAATAACTGAAACTCAACGAA
CTAGATTCCCACTTTCGTGGGAATGACGG	CATCAGTCTGCCGTTTACAGCACGGTTTCTTTAGATTTTACGTT
CTAGATTCCCGCCTGCGCGGGAATGACGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_NVYQ01000138.1\|WP_002255040.1\|18156_19335_-\|phosphoglycerate-kinase	unknown	unknown	gnl\|CDD\|234613
NZ_NVYQ01000138.1\|WP_002224216.1\|22529_23801_-\|lipid-IV(A)-3-deoxy-D-manno-octulosonic-acid-transferase	unknown	unknown	gnl\|CDD\|224436
NZ_NVYQ01000138.1\|WP_002215198.1\|22039_22489_-\|CopD-family-copper-resistance-protein	unknown	unknown	gnl\|CDD\|225934
NZ_NVYQ01000138.1\|WP_025460752.1\|23863_25312_-\|decarboxylating-NADP(+)-dependent-phosphogluconate-dehydrogenase	unknown	unknown	gnl\|CDD\|223439
NZ_NVYQ01000138.1\|WP_117366008.1\|15501_15984_+\|TlpA-family-protein-disulfide-reductase	unknown	unknown	gnl\|CDD\|239264
NZ_NVYQ01000138.1\|WP_002221759.1\|17841_18090_+\|BolA-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|227340
NZ_NVYQ01000138.1\|WP_002216134.1\|26566_27490_-\|UDP-3-O-acyl-N-acetylglucosamine-deacetylase	unknown	unknown	gnl\|CDD\|237294
NZ_NVYQ01000138.1\|WP_002255031.1\|19415_20669_-\|UDP-N-acetylglucosamine-1-carboxyvinyltransferase	unknown	unknown	gnl\|CDD\|236486
NZ_NVYQ01000138.1\|WP_002255032.1\|16824_17742_+\|cell-division-protein-FtsX	unknown	unknown	gnl\|CDD\|129531
NZ_NVYQ01000138.1\|WP_002255034.1\|21032_22007_-\|TerC-family-protein	unknown	unknown	gnl\|CDD\|274743
NZ_NVYQ01000138.1\|WP_002221756.1\|16177_16828_+\|cell-division-ATP-binding-protein-FtsE	unknown	unknown	gnl\|CDD\|225438

Protein	Function_ID	Function_description	E-value
NZ_NVYQ01000138.1\|WP_002255040.1\|18156_19335_-\|phosphoglycerate-kinase	gnl\|CDD\|234613	PRK00073, pgk, phosphoglycerate kinase; Provisional.	0
NZ_NVYQ01000138.1\|WP_002224216.1\|22529_23801_-\|lipid-IV(A)-3-deoxy-D-manno-octulosonic-acid-transferase	gnl\|CDD\|224436	COG1519, KdtA, 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane].	0
NZ_NVYQ01000138.1\|WP_002215198.1\|22039_22489_-\|CopD-family-copper-resistance-protein	gnl\|CDD\|225934	COG3399, COG3399, Uncharacterized protein conserved in bacteria [Function unknown].	1.30085e-52
NZ_NVYQ01000138.1\|WP_025460752.1\|23863_25312_-\|decarboxylating-NADP(+)-dependent-phosphogluconate-dehydrogenase	gnl\|CDD\|223439	COG0362, Gnd, 6-phosphogluconate dehydrogenase [Carbohydrate transport and metabolism].	0
NZ_NVYQ01000138.1\|WP_117366008.1\|15501_15984_+\|TlpA-family-protein-disulfide-reductase	gnl\|CDD\|239264	cd02966, TlpA_like_family, TlpA-like family; composed of TlpA, ResA, DsbE and similar proteins. TlpA, ResA and DsbE are bacterial protein disulfide reductases with important roles in cytochrome maturation. They are membrane-anchored proteins with a soluble TRX domain containing a CXXC motif located in the periplasm. The TRX domains of this family contain an insert, approximately 25 residues in length, which correspond to an extra alpha helix and a beta strand when compared with TRX. TlpA catalyzes an essential reaction in the biogenesis of cytochrome aa3, while ResA and DsbE are essential proteins in cytochrome c maturation. Also included in this family are proteins containing a TlpA-like TRX domain with domain architectures similar to E. coli DipZ protein, and the N-terminal TRX domain of PilB protein from Neisseria which acts as a disulfide reductase that can recylce methionine sulfoxide reductases.	5.95083e-27
NZ_NVYQ01000138.1\|WP_002221759.1\|17841_18090_+\|BolA-family-transcriptional-regulator	gnl\|CDD\|227340	COG5007, COG5007, Predicted transcriptional regulator, BolA superfamily [Transcription].	5.47553e-31
NZ_NVYQ01000138.1\|WP_002216134.1\|26566_27490_-\|UDP-3-O-acyl-N-acetylglucosamine-deacetylase	gnl\|CDD\|237294	PRK13186, lpxC, UDP-3-O-acyl-N-acetylglucosamine deacetylase.	5.04031e-176
NZ_NVYQ01000138.1\|WP_002255031.1\|19415_20669_-\|UDP-N-acetylglucosamine-1-carboxyvinyltransferase	gnl\|CDD\|236486	PRK09369, PRK09369, UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Validated.	0
NZ_NVYQ01000138.1\|WP_002255032.1\|16824_17742_+\|cell-division-protein-FtsX	gnl\|CDD\|129531	TIGR00439, Cell_division_protein_FtsX, putative protein insertion permease FtsX. FtsX is an integral membrane protein encoded in the same operon as signal recognition particle docking protein FtsY and FtsE. It belongs to a family of predicted permeases and may play a role in the insertion of proteins required for potassium transport, cell division, and other activities. FtsE is a hydrophilic nucleotide-binding protein that associates with the inner membrane by means of association with FtsX. [Cellular processes, Cell division, Protein fate, Protein and peptide secretion and trafficking].	9.097e-163
NZ_NVYQ01000138.1\|WP_002255034.1\|21032_22007_-\|TerC-family-protein	gnl\|CDD\|274743	TIGR03718, R_switched_Alx, integral membrane protein, TerC family. Rfam model RF00080 describes a structured RNA element called the yybP-ykoY leader, or SraF, which may precede one or several genes in a genome. Members of this highly hydrophobic protein family often are preceded by a yybP-ykoY leader, which may serve as a riboswitch. From the larger group of TerC homologs (pfam03741), this subfamily contains TerC itself from Alcaligenes sp. plasmid IncHI2 pMER610 and from Proteus mirabilis. It also contains the alkaline-inducible E. coli protein Alx, which unlike the two TerC examples is preceded by a yybP-ykoY leader.	2.3654e-147
NZ_NVYQ01000138.1\|WP_002221756.1\|16177_16828_+\|cell-division-ATP-binding-protein-FtsE	gnl\|CDD\|225438	COG2884, FtsE, Predicted ATPase involved in cell division [Cell division and chromosome partitioning].	1.12819e-120

>NZ_NVYQ01000138.1|WP_025460752.1|23863_25312_-|decarboxylating-NADP(+)-dependent-phosphogluconate-dehydrogenase
MKGDIGVIGLAVMGQNLILNMNDCGFKVVAYNRTIGKVDEFLNGAAKGTDIVGAYSLQDLVDKLAKPRKIMMMVRAGSVVDDFIEQLLPLLEEGDIIIDGGNANYPDTTRRTHYLAEKGILFVGAGVSGGEEGARHGPSIMPGGDKRAWEAVKPIFQAIAAKTPQGEPCCDWVGRDGAGHFVKMVHNGIEYGDMQLICEAYQFMKDGLGLSYDEMHRVFTAWNKTELDSYLIEITAAILGYKDEGGEPLVEKILDTAGQKGTGKWTGINALDLGIPLTLISEAVFARCVSSFKEQRVQTGKLFARTVTPVEGGKQEWVEALRQALLASKIISYAQGFMLIREAGESYGWDLDYGNTALLWREGCIIRSAFLSNIRDAYENNPDLVFLGTDPYFKNILENCLPAWRKVVAKAVECGIPMPCMASAITFLDGYTTERLPANLLQAQRDYFGAHTYERTDKPRGEFFHTNWTGKGGDTASTTYDI
>NZ_NVYQ01000138.1|WP_002224216.1|22529_23801_-|lipid-IV(A)-3-deoxy-D-manno-octulosonic-acid-transferase
MFQWLYDVLWLLAPIWIRRYLDKRSGSAPAYRAHRDERFGKPYPNPVTGAVWIHAVSVGETRAAQPLIRELRQRFPDAPLLMTQMTPTGRETAQVLFPDAQCRYLPYDKKTWVRQFLREHRPMFGILMETEIWPNLMTECRKSGVPLFLANARLSEKSLNGYLKVRRLIRPAAASLTGCLAQTEADAARLAKLGAASVQVCGNTKYDLMPSEQMKTLAGQFEKRIGGRPVAVCGSTRVYRGEDEAEKLLAAWQQYRGDALLVVVPRHPEHFQTVFETAKRFGFKVQRRSDGLPVEPDTQVWIGDSMGELYAYYLCADVAFVGGSLVDSGCQNIIEPLSCGVPTIFGFSTYNFSEACRHALASGAAVRVESADAWREAVEKTLSSEGGGMQMQAHVDGFIAQHRGAGARIAEAVREAVCGHRGR
>NZ_NVYQ01000138.1|WP_002215198.1|22039_22489_-|CopD-family-copper-resistance-protein
MSIYAVAHIVHLYCAIAFVGGVFFEVLVLSVLHTGRVSCEARREVEKAMSYRAVRVMPFVVGLLFASGVVMAANRYLSILGEPFATSFGTMLTLKILLAFSVLAHFAIAVVKMARSTLTVGWSKYIHAVVFTHMLLIVFLAKAMFYISW
>NZ_NVYQ01000138.1|WP_002255034.1|21032_22007_-|TerC-family-protein
MTEYPGIGSPLFYGVFFAAVLVMIALDMFSLKKNGSHKVGVKEALAWSGLWVAVSCLFAGWLYFELAGNLGYGAAVAKEKVLEFFTGYILEKSLAVDNIFVFLMIFGYFKVAPQFQHRVLLYGVLGALVLRTVMIFVGAALVQQFEWILYLFGAFLLYTGIHMMKPEGDEKEDLANSRLLNAVKKVVPVGTEFHGEKFFTVENGKKIATPLFLVLVMIELSDVVFAVDSIPAVFAVTTDPFIVLTSNIFAILGLRAMYFLLADVAERFIFLKYGLAFVLGFIGVKMLVMHWVHIPISVSLSVVFGALGASILTSLIYTKKQPDK
>NZ_NVYQ01000138.1|WP_002255031.1|19415_20669_-|UDP-N-acetylglucosamine-1-carboxyvinyltransferase
MDKLKISANGPLNGEITVSGAKNAALPLMCAGLLTSGTLRLKNVPMLADVKTTQKLLQGMGARVLTDNISEFEINGGTVNNTCAPYELVRTMRASILVLGPTLARFGEAQVSLPGGCAIGSRPVDQHLKGLEAMGAEIVIEHGYVKAKGKLKGTRVAMDVVTVGGTENLLMAATLAEGTTVLENCAIEPEVVDLAECLVKMGAKISGIGTSTMIVEGADELHGCEHSVVPDRIEAGTFLCAVAITGGRVVLRNAAPKTMEVVLDKLVEAGAVIEAGDDWIAIDMRQRPKAVDIRTVVHPGFPTDMQAQFMALNAVAEGSCRVVETIFENRFMHVPELNRMGANITTEGNTAFVQGVERLSGAVVKATDLRASASLVIAGLAARGETVVEQIYHLDRGYENIEKKLGSVGAKIERVSG
>NZ_NVYQ01000138.1|WP_002255040.1|18156_19335_-|phosphoglycerate-kinase
MAFLKLTEQNVQGKTVLIRADMNVPFKDGKISDDTRIRASLASIQYCMDNGASVIVMIHLGRPTEGEFHPEDDVAPVAAHLGGLLGKDVKVLNDWRENKPALNAGDVVMLQNVRINKGEKKNDLELGKAYASLCDVFVNDAFGTAHRAQASTEAVAQAAPVACVGVLMAGELDALGKALKQPARPMVAIVAGSKVSTKLTILESLADKVDQLIVGGGIANTFLLAEGKAIGKSLAEHDLVEESKKIMAKMAAKGGSVPLPTDVVVAKAFAADEEAVVKDIADVAEDEMILDIGPKSAAALADLLKAAGTVVWNGPVGVFEFDQFAGGTKALAEAIAQSKAFSIAGGGDTLAAIAKFGVTEQIGYISTGGGAFLEFLEGKELPAVAALEKRGA
>NZ_NVYQ01000138.1|WP_002221759.1|17841_18090_+|BolA-family-transcriptional-regulator
MLTSEQVKAMIEGVAKCEHIEVEGDGHHFFAVIVSSEFEGKARLARHRLIKDGLKAQLESNELHALSISVAATPAEWAAKAQ
>NZ_NVYQ01000138.1|WP_002255032.1|16824_17742_+|cell-division-protein-FtsX
MSIIHYLSLHVESARTALKQLLRQPFGTLLTLIMLAVAMTLPLFMYLGIQSGQSVLGKLNESPQITVYMETAAAQSDSDTVRSLLARDKRLDNIRFIGKEDGLEELQSNLDQNLISMLDGNPLPDVFIVTPDPATTPAQMQAIYRDITKLPMVESANMDTEWVQTLYQINEFIRKILWFLSLTLGMAFVLVAHNTIRLQILSRKEEIEITKLLGAPASFIRRPFLYQAMWQSILSAAVSLGLCGWLLSAVRPLVDAIFKPYGLNIGWRFFYPGEIVLVFGFVIALGVFGAWLATTQHLLGFKAKK
>NZ_NVYQ01000138.1|WP_002221756.1|16177_16828_+|cell-division-ATP-binding-protein-FtsE
MIRFEQVSKTYPGGFEALKNVSFQINKGEMIFIAGHSGSGKSTVLKLISGITKPSRGKVHFNNQDLGTLTDNQIGFMRQHIGIVFQDHKILYDRNVLQNVILPLRIIGYPPRKAEERARIAIEKVGLKGRELDDPVTLSGGEQQRLCIARAVVHQPGLLIADEPSANLDRAYALDIMELFKTFHEAGTTVIVAAHDETLMADYGHRILRLSKGRLA
>NZ_NVYQ01000138.1|WP_117366008.1|15501_15984_+|TlpA-family-protein-disulfide-reductase
MKYLNLAAITLAATFAAHTASADELAGWKDNTPQSLQSLKAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTSDNIGNFLKQPPVSYPIWRYTGANSRNFMKSYGNNVGVLPFTVVEAPKCGYKQTITGEVNEKSLTDAVKLAHSKCR
>NZ_NVYQ01000138.1|WP_002216134.1|26566_27490_-|UDP-3-O-acyl-N-acetylglucosamine-deacetylase
MLQRTLAKSISVTGVGLHSGERVALTLHPAPENSGISFRRTDLDGEMGEQIKLTPYLINDTRLSSTIVTDKGVRVGTIEHIMSALSAYGIDNALIELNAPEIPIMDGSSLPFIYLLQDAGVVDQKAQKRFLKILKPVEIKEAGKWVRFTPYDGFKVTLTIEFDHPVFNRSSPTFEIDFAGKSYIDEIARARTFGFMHEVEMMRAHNLGLGGNLNNAIVIDDTDVLNPEGLRYPDEFVRHKILDAIGDLYIVGHPIVGAFEGYKSGHAINNALLRAVLADETAYDRVEFADSDDLPDAFHELNIRTCG

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_NVYQ01000138_1	1.1\|26140\|45\|NZ_NVYQ01000138\|CRISPRCasFinder	26140-26184	45	NZ_NVYQ01000209.1	1678-1722	0	1.0
NZ_NVYQ01000138_1	1.1\|26140\|45\|NZ_NVYQ01000138\|CRISPRCasFinder	26140-26184	45	NZ_NVYQ01000209.1	2284-2328	1	0.978
NZ_NVYQ01000138_1	1.1\|26140\|45\|NZ_NVYQ01000138\|CRISPRCasFinder	26140-26184	45	NZ_NVYQ01000210.1	278-322	0	1.0
NZ_NVYQ01000138_1	1.1\|26140\|45\|NZ_NVYQ01000138\|CRISPRCasFinder	26140-26184	45	NZ_NVYQ01000210.1	352-396	0	1.0
NZ_NVYQ01000138_1	1.1\|26140\|45\|NZ_NVYQ01000138\|CRISPRCasFinder	26140-26184	45	NZ_NVYQ01000210.1	976-1020	1	0.978
NZ_NVYQ01000138_1	1.1\|26140\|45\|NZ_NVYQ01000138\|CRISPRCasFinder	26140-26184	45	NZ_NVYQ01000224.1	525-569	1	0.978
NZ_NVYQ01000138_1	1.1\|26140\|45\|NZ_NVYQ01000138\|CRISPRCasFinder	26140-26184	45	NZ_NVYQ01000240.1	12-56	1	0.978

1. spacer 1.1|26140|45|NZ_NVYQ01000138|CRISPRCasFinder matches to position: 1678-1722, mismatch: 0, identity: 1.0

gatttaagtttcaaaatttattctaaataactgaaactcaacgaa	CRISPR spacer
gatttaagtttcaaaatttattctaaataactgaaactcaacgaa	Protospacer
*********************************************

2. spacer 1.1|26140|45|NZ_NVYQ01000138|CRISPRCasFinder matches to position: 2284-2328, mismatch: 1, identity: 0.978

gatttaagtttcaaaatttattctaaataactgaaactcaacgaa	CRISPR spacer
gattaaagtttcaaaatttattctaaataactgaaactcaacgaa	Protospacer
**** ****************************************

3. spacer 1.1|26140|45|NZ_NVYQ01000138|CRISPRCasFinder matches to position: 278-322, mismatch: 0, identity: 1.0

gatttaagtttcaaaatttattctaaataactgaaactcaacgaa	CRISPR spacer
gatttaagtttcaaaatttattctaaataactgaaactcaacgaa	Protospacer
*********************************************

4. spacer 1.1|26140|45|NZ_NVYQ01000138|CRISPRCasFinder matches to position: 352-396, mismatch: 0, identity: 1.0

gatttaagtttcaaaatttattctaaataactgaaactcaacgaa	CRISPR spacer
gatttaagtttcaaaatttattctaaataactgaaactcaacgaa	Protospacer
*********************************************

5. spacer 1.1|26140|45|NZ_NVYQ01000138|CRISPRCasFinder matches to position: 976-1020, mismatch: 1, identity: 0.978

gatttaagtttcaaaatttattctaaataactgaaactcaacgaa	CRISPR spacer
gattaaagtttcaaaatttattctaaataactgaaactcaacgaa	Protospacer
**** ****************************************

6. spacer 1.1|26140|45|NZ_NVYQ01000138|CRISPRCasFinder matches to position: 525-569, mismatch: 1, identity: 0.978

gatttaagtttcaaaatttattctaaataactgaaactcaacgaa	CRISPR spacer
gattaaagtttcaaaatttattctaaataactgaaactcaacgaa	Protospacer
**** ****************************************

7. spacer 1.1|26140|45|NZ_NVYQ01000138|CRISPRCasFinder matches to position: 12-56, mismatch: 1, identity: 0.978

gatttaagtttcaaaatttattctaaataactgaaactcaacgaa	CRISPR spacer
gattaaagtttcaaaatttattctaaataactgaaactcaacgaa	Protospacer
**** ****************************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

10. NZ_NVYQ01000246

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

11. NZ_NVYQ01000134

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_NVYQ01000134_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_NVYQ01000134_1

6977-7095

Orphan

Consensus_repeat	Method
GTTTTTTCCGATAAAGTCCTGCTGCGTTGTGTTGCTGGATTCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_NVYQ01000134_1

>merge|NZ_NVYQ01000134|1|6977-7095|CRISPRCasFinder
GTTTTTTCCGATAAAGTCCTGCTGCGTTGTGTTGCTGGATTCCCGCCTGCGCGGGAATGACGGCGGTGGGGTTTCTGTTTTTTCCGATAAAGTCCTGCTGCATTGTGTTGCTGGATTCC

>NZ_NVYQ01000134|1|1|6977-7095|CRISPRCasFinder
GTTTTTTCCGATAAAGTCCTGCTGCGTTGTGTTGCTGGATTCC	CGCCTGCGCGGGAATGACGGCGGTGGGGTTTCT
GTTTTTTCCGATAAAGTCCTGCTGCATTGTGTTGCTGGATTCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_NVYQ01000134.1\|WP_002213703.1\|10132_10504_-\|DUF2628-domain-containing-protein	unknown	unknown	gnl\|CDD\|313994
NZ_NVYQ01000134.1\|WP_002223797.1\|3042_3549_+\|DUF1804-family-protein	unknown	unknown	gnl\|CDD\|370140
NZ_NVYQ01000134.1\|WP_002217325.1\|8203_9295_-\|acyl-CoA/acyl-ACP-dehydrogenase	unknown	unknown	gnl\|CDD\|224871
NZ_NVYQ01000134.1\|WP_025459881.1\|17027_18029_+\|tRNA-dihydrouridine-synthase	unknown	unknown	gnl\|CDD\|223120
NZ_NVYQ01000134.1\|WP_002233788.1\|9429_9978_-\|carboxymuconolactone-decarboxylase-family-protein	unknown	unknown	gnl\|CDD\|225039
NZ_NVYQ01000134.1\|WP_002217326.1\|7576_7747_-\|rubredoxin	unknown	unknown	gnl\|CDD\|224687
NZ_NVYQ01000134.1\|WP_002219316.1\|959_1196_+\|hypothetical-protein	unknown	unknown	unknown
NZ_NVYQ01000134.1\|WP_002215845.1\|2014_2233_+\|hypothetical-protein	unknown	unknown	unknown
NZ_NVYQ01000134.1\|WP_002222592.1\|2229_2568_+\|hypothetical-protein	unknown	unknown	unknown
NZ_NVYQ01000134.1\|WP_002215782.1\|792_957_+\|hypothetical-protein	unknown	unknown	unknown
NZ_NVYQ01000134.1\|WP_002242631.1\|10798_12490_-\|D-lactate-dehydrogenase	unknown	unknown	gnl\|CDD\|236872
NZ_NVYQ01000134.1\|WP_002233783.1\|1604_1787_+\|hypothetical-protein	unknown	unknown	unknown
NZ_NVYQ01000134.1\|WP_025459882.1\|13013_16847_+\|FAD/FMN-binding-oxidoreductase	unknown	unknown	gnl\|CDD\|378859
NZ_NVYQ01000134.1\|WP_002215844.1\|1831_2002_-\|YegP-family-protein	unknown	unknown	gnl\|CDD\|225956
NZ_NVYQ01000134.1\|WP_025459883.1\|4933_6733_-\|YadA-family-autotransporter-adhesin	unknown	unknown	gnl\|CDD\|227614
NZ_NVYQ01000134.1\|WP_002222591.1\|2579_2846_+\|hypothetical-protein	unknown	unknown	unknown
NZ_NVYQ01000134.1\|WP_002219313.1\|2842_3040_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_NVYQ01000134.1\|WP_002242631.1\|10798_12490_-\|D-lactate-dehydrogenase	gnl\|CDD\|236872	PRK11183, PRK11183, D-lactate dehydrogenase; Provisional.	0
NZ_NVYQ01000134.1\|WP_002233788.1\|9429_9978_-\|carboxymuconolactone-decarboxylase-family-protein	gnl\|CDD\|225039	COG2128, COG2128, Uncharacterized conserved protein [Function unknown].	6.57397e-28
NZ_NVYQ01000134.1\|WP_025459883.1\|4933_6733_-\|YadA-family-autotransporter-adhesin	gnl\|CDD\|227614	COG5295, Hia, Autotransporter adhesin [Intracellular trafficking and secretion / Extracellular structures].	7.6359e-79
NZ_NVYQ01000134.1\|WP_002217325.1\|8203_9295_-\|acyl-CoA/acyl-ACP-dehydrogenase	gnl\|CDD\|224871	COG1960, CaiA, Acyl-CoA dehydrogenases [Lipid metabolism].	4.85847e-29
NZ_NVYQ01000134.1\|WP_002213703.1\|10132_10504_-\|DUF2628-domain-containing-protein	gnl\|CDD\|313994	pfam10947, DUF2628, Protein of unknown function (DUF2628). Some members in this family of proteins are annotated as yigF however currently no function is known.	2.85601e-07
NZ_NVYQ01000134.1\|WP_025459882.1\|13013_16847_+\|FAD/FMN-binding-oxidoreductase	gnl\|CDD\|378859	pfam12447, DUF3683, Protein of unknown function (DUF3683). This domain family is found in bacteria, and is approximately 120 amino acids in length. The family is found in association with pfam02754, pfam01565, pfam02913.	2.71431e-69
NZ_NVYQ01000134.1\|WP_002217326.1\|7576_7747_-\|rubredoxin	gnl\|CDD\|224687	COG1773, COG1773, Rubredoxin [Energy production and conversion].	3.00805e-22
NZ_NVYQ01000134.1\|WP_002223797.1\|3042_3549_+\|DUF1804-family-protein	gnl\|CDD\|370140	pfam08822, DUF1804, Protein of unknown function (DUF1804). This family of bacterial protein is uncharacterized.	1.41904e-75
NZ_NVYQ01000134.1\|WP_002215844.1\|1831_2002_-\|YegP-family-protein	gnl\|CDD\|225956	COG3422, COG3422, Uncharacterized conserved protein [Function unknown].	1.90241e-24
NZ_NVYQ01000134.1\|WP_025459881.1\|17027_18029_+\|tRNA-dihydrouridine-synthase	gnl\|CDD\|223120	COG0042, COG0042, tRNA-dihydrouridine synthase [Translation, ribosomal structure and biogenesis].	6.67368e-106

>NZ_NVYQ01000134.1|WP_025459883.1|4933_6733_-|YadA-family-autotransporter-adhesin
MNKIYRIIWNSALNAWVVVSELTRNHTKRASATVATAVLATLLSATVQANTTDEEDEEYLEPVKRTAVVLSFRSDKEGTGEKEVTEDSHWGVYFDEKGVLKAGTITLKAGDNLKIKQNTDENTDENTNASSFTYSLKKDLTDLTSVETEKLSFGANGNKVNITSDTKGLNFAKETAGTNGDTTVHLNGIGSTLTDTLAGSSASHVDAGNQSTHYTRAASIKDVLNAGWNIKGVKTGSTTGQSENVDFVRTYDTVEFLSADTKTTTVNVESKDNGKRTEVKIGAKTSVIKEKDGKLVTGKGKGENGSSTDEGEGLVTAKEVIDAVNKAGWRMKTTTANGQTGQADKFETVTSGTNVTFASGKGTTATVSKDDQGNITVMYDVNVGDALNVNQLQNSGWNLDSKAVAGSSGKVISGNVSPSKGKMDETVNINAGNNIEITRNGKNIDIATSMTPQFSSVSLGAGADAPTLSVDDKGALNVGSKDANKPVRITNVAPGVKEGDVTNVAQLKGVAQNLNNRIDNVDGNARAGIAQAIATAGLVQAYLPGKSMMAIGGGTYRGEAGYAIGYSSISDGGNWIIKGTASGNSRGHFGASASVGYQW
>NZ_NVYQ01000134.1|WP_002223797.1|3042_3549_+|DUF1804-family-protein
MAHPQEIREKLRRLYVSGEQTLETAALMCEIPQTTARAWKRADKEKGDDWDKMRAAYTLAGGGIEDLSRAMLAGFMVQYNSTMTMLQDSSTEDLPPSDRAKLLASLADAFTKTVSANARVMPETSKLATALELIEFLMAFVQEKHPKHLPAFVEVLEPFGAEVEKKFG
>NZ_NVYQ01000134.1|WP_002219313.1|2842_3040_+|hypothetical-protein
MSDPILEALARIENKTDQTLKNQKEMQAEIAQIRQDTKRTAITFGALGGGVITVGWELLKAKMGL
>NZ_NVYQ01000134.1|WP_002222591.1|2579_2846_+|hypothetical-protein
MDFEFGFRTLWPIATAAFWFWVNGISGRLKEADKRIDDLKEELHAVKLSYHTKQDAKADRDNIAASLGRIENKLEKVNEKLDRKADKS
>NZ_NVYQ01000134.1|WP_002222592.1|2229_2568_+|hypothetical-protein
MTYRELVERQLAVRHADLELGLSRAREQEPFVIHVSDLLDKAGIEYAVRMDKDFQTTFHLEYPITNYDTFKRAVWQTLGAYYCVCNDGDGLEIASNRPDGYAVRIVFGDVPV
>NZ_NVYQ01000134.1|WP_002215845.1|2014_2233_+|hypothetical-protein
MNEYTFSYRFNGKSWSLSIWADNPEEARAKFRAARENAHYDGEVVAKVYTFVNISWVKKLYKRTKYLMGIKE
>NZ_NVYQ01000134.1|WP_002215844.1|1831_2002_-|YegP-family-protein
MYFEIYKDAKGEYRWRLKAANHEIIAQGEGYTSKQNCQHAVDLLKSTTAATPVKEV
>NZ_NVYQ01000134.1|WP_002233783.1|1604_1787_+|hypothetical-protein
MPTPPAALMVAPVRPNPPKDGKTVTLLEHAAEFGGYVAELENQNQAWRDWAGNHSRKVGN
>NZ_NVYQ01000134.1|WP_002219316.1|959_1196_+|hypothetical-protein
MRILDIFKNPATGNVSHSKLWANVACAAGTFKFVMLPDPSAEIWAVYLGIVGGYAVARSFVSVKRQEVENESRETAGE
>NZ_NVYQ01000134.1|WP_002215782.1|792_957_+|hypothetical-protein
MGQVAFYEKMIGLWSAKSREASEQADLAAFEFAEGELANYQEMLKRHLQTKSVE
>NZ_NVYQ01000134.1|WP_002217326.1|7576_7747_-|rubredoxin
MAQYMCGPCGWIYDEEHGDPEHGIAPGTKFEDIPDDWKCPECGVGKEDFYLLDFVI
>NZ_NVYQ01000134.1|WP_002217325.1|8203_9295_-|acyl-CoA/acyl-ACP-dehydrogenase
MNAQTLIANVAEFVKTKLKPIVDDIDRKGYYPEAFMRELGAIGGFGAVGTEAEGGNGLGLATQIAVLREIGKECGATSFSAWCQAACAWYLHQTPNRAVKDKYLADILQGKVLAGTGMSNTVKHLADIEKHNLQAERVEGGYTVNGALPWVSNIGEDHIWANTAQIGGGYVMFITGGQWEGVSLQNCPEFCALEGTRTFSLNFKDVFIPDEDIIAAPEQFADYIQSIKAGFILLQIGIGAGVIDGSLGIIRLANVVNAEVNRYLDDGYDSLKTRLDGAWAETERLAGLAWSGTPDNLTTLKLREAAAVLTLAAAQSAALHSGAKGYLMRSPAQRRVREAMFVAIVTPAIKHLRKEIAAIEAAK
>NZ_NVYQ01000134.1|WP_002233788.1|9429_9978_-|carboxymuconolactone-decarboxylase-family-protein
MARLTVHTLETAPEAAKARVEAVLQNNGFIPNLIGVLSNAPEALAFYQEVGKLNAANSLTAGEVEVIQIIAARTNQCGFCVAGHTKLATLKKLLSEQSVKAARALAAGEFDDAKLGALAAFTQAVMAKKGAVSDDELKAFFDAGYNQQQAVEVVMGVALATLCNYVNNLGQTEINPELQAYA
>NZ_NVYQ01000134.1|WP_002213703.1|10132_10504_-|DUF2628-domain-containing-protein
MKPYKIYTHPALPPQAVKQGWSWPGLLFGTLWACFKRMWGLGLGLTGAIFVLAVFAQLVYGDTPATDSAFNVLGLAVSVWFGAKGNSLYARHLLSRGYTELPETVEAANPQAALAQYFGRGGR
>NZ_NVYQ01000134.1|WP_002242631.1|10798_12490_-|D-lactate-dehydrogenase
MSASQLLSRLTQTVGEKYIITAPAKTEQYRQGYRFGEGRALAVVRPGTILEMWKILQACVEADVIVITQAANTGLTGGSTPDGNDYDRDIVIVNTMRMNIIQTINNNEQVVCLPGSTLNQLELLLKPLGREPHSVIGSSCIGASVLGGVCNNSGGALVQRGPAYTEMALFAQINEEGRLELVNHLGIDLGDTPEEILTNLQGHHYQNKDIKQDAGKGHDHAYCEHVRQVDEPTAARFNADPARHYEASGCAGKLMVFAVRLDTFPQEKQTAVFYIGTNDINELTDIRRAALGEFESLPVSGEYIHRHAFDIADVYGKDTFYVIKKFGTHQLPKLFDLKARVDRFGKKASFLPKHFSDKAMQFVSKYLPDHLPKSMRDYRDKYEHHLILKMGGKGVDEARAFLKEYFAHHSGAFFECNAEETQAAMLHRFAVASAAIRYRAVHDDEVEDLVALDIALRRDDRDWFEKLPSEIDNKIIHKLYYGHFMCHVFHQDYIIKKGNDCMALEHEMLHLLDQRGAQYPAEHNVGHLYEAKPALKQFYRKLDPTNSFNPGVGKTSKKKNWAE
>NZ_NVYQ01000134.1|WP_025459882.1|13013_16847_+|FAD/FMN-binding-oxidoreductase
MTTTTAPQRIREIPYNYTSYTDREIVIRLLGDEAWQILQDLRGQRKTGRSARMLFEVLGDIWVVVRNPYLVDDLLEHPKRRAALVREMRHRLNEIRKRRDDNRQVDVLVAAAEKAVERFDSSFDETIQKRHQILERLSKITKPHNIMFDGLARVTHVTDATDWRVEYPFVVVNPDTEAEIAPLVRALIELDLVIIPRGGGTGYTGGAVPLDANSAVINTEKLDKHRGVEYVELAGLDGKHPIIRCGAGVVTRRVEETAHQAGLVFAVDPTSADASCVGGNVAMNAGGKKAVLWGTALDNLACWQMVNPQGEWLRIERVRHNFGKIHDEETAVFDVHTLDSDGLNIVKTERLEIPGHKFRKVGLGKDVTDKFLSGLPGVQKEGTDGIITSVAFVLHKMPKHTRTVCMEFFGTVATATPSIVEIRDFLLAHDSVRLAGLEHLDWRYVRAVGYATKAAGKGRPKMVLLADVVSDDEAAVEAAAEHICELARARDGEGFIAVSPEARKTFWLDRSRTAAIAKHTNAFKINEDVVIPLERLGEYSDGIERINIELSIQNKLKLCAALEQYLSGKLPIDKMGTDLPTAELLGERGKHALAHVSAVKARWEWLLANLDAPLADYKARYGSAVHAAPEAKDNESCFTAFRDFRLRVSVKADVMKPLSEIFSGKTDTKIIQGLGKIHAKTVRSRVFVALHMHAGDGNVHTNIPVNSDDAEMLQTAYRSVERIMKIARSLGGVISGEHGIGITKLEFLSDEEMQPFWDYKNQVDPKHTFNRHKLMKGSDLRNAYTPSFELLGAESLIMEKSDLGTIADSVKDCLRCGKCKPVCSTHVPRANLLYSPRNKILGVGLLTEAFLYEEQTRRGVSIKHFEELMDIGDHCTVCHRCVKPCPVNIDFGDVTVAVRNYLADSGHKRFEPAAAMGMAFLNATGPKTIKALRAAMIQTGFPAQNFAYKIGKLLPIGTKKQKAEPKATVGKAPIKEQVIHFINRPLPKSVPAKTPRSLLGIEDGKSIPIIRNPAAPEDAEAVFYFPGCGSERLFSQIGLAVQAMLWHVGVQTVLPPGYMCCGYPQDAGGNKAKAEEMSTNNRVAFHRMANTLNYLDIKTVVVSCGTCYDQLEKYRFEEIFPGCRIIDIHEYLLEKGVKLNGVKGQQYLYHDPCHTPIKTMNATQMASSLMGQKVVLSDRCCGESGMFAVKRPDIATQVKFRKQEEIEKNLKELPQGEPVKMLTSCPACLQGLSRYADDNNMPADYIVIEMAKYILGENWLDEFVKKANNGGVEKVLL
>NZ_NVYQ01000134.1|WP_025459881.1|17027_18029_+|tRNA-dihydrouridine-synthase
MIDRQTNEPKQKTRITLAPMQGLIDDVMRDLLTRIGGYDECVSEFVRITHTVHSRSIWLKYVPEIANGNKTFSGTPCTVQLLGSDADNMAANALEAVRFGANKIDLNFGCPAPTVNKHKGGAILLKEPELIFHIVKTLRGRLPAHIPLTAKMRLGYEDKSRALECACAIAEGGACGLTVHARTKAEGYEPPAHWEWIRKIRDSVNIPVTANGDVFSLQDYIGIKTISGCNSVMLGRGAVIRPDLARQIKQYENGGPVKDTDFAEVSKWIRQFFELCLTKEANNKYPLARLKQWLGMMKKEFAAAQNLFDRVRTVKDADEVRNILAEFEREMNT

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_NVYQ01000134_1	1.1\|7020\|33\|NZ_NVYQ01000134\|CRISPRCasFinder	7020-7052	33	NZ_NVYQ01000131.1	11833-11865	2	0.939
NZ_NVYQ01000134_1	1.1\|7020\|33\|NZ_NVYQ01000134\|CRISPRCasFinder	7020-7052	33	NZ_NVYQ01000147.1	924-956	2	0.939
NZ_NVYQ01000134_1	1.1\|7020\|33\|NZ_NVYQ01000134\|CRISPRCasFinder	7020-7052	33	NZ_NVYQ01000165.1	831-863	2	0.939
NZ_NVYQ01000134_1	1.1\|7020\|33\|NZ_NVYQ01000134\|CRISPRCasFinder	7020-7052	33	NZ_NVYQ01000193.1	5918-5950	2	0.939
NZ_NVYQ01000134_1	1.1\|7020\|33\|NZ_NVYQ01000134\|CRISPRCasFinder	7020-7052	33	NZ_NVYQ01000209.1	1554-1586	2	0.939
NZ_NVYQ01000134_1	1.1\|7020\|33\|NZ_NVYQ01000134\|CRISPRCasFinder	7020-7052	33	NZ_NVYQ01000209.1	2437-2469	2	0.939
NZ_NVYQ01000134_1	1.1\|7020\|33\|NZ_NVYQ01000134\|CRISPRCasFinder	7020-7052	33	NZ_NVYQ01000224.1	677-709	2	0.939
NZ_NVYQ01000134_1	1.1\|7020\|33\|NZ_NVYQ01000134\|CRISPRCasFinder	7020-7052	33	NZ_NVYQ01000240.1	165-197	2	0.939
NZ_NVYQ01000134_1	1.1\|7020\|33\|NZ_NVYQ01000134\|CRISPRCasFinder	7020-7052	33	NZ_NVYQ01000280.1	18-50	2	0.939
NZ_NVYQ01000134_1	1.1\|7020\|33\|NZ_NVYQ01000134\|CRISPRCasFinder	7020-7052	33	NZ_NVYQ01000284.1	80-112	2	0.939

1. spacer 1.1|7020|33|NZ_NVYQ01000134|CRISPRCasFinder matches to position: 11833-11865, mismatch: 2, identity: 0.939

cgcctgcgcgggaatgacggcggtggggtttct	CRISPR spacer
cgcctgcgcgggaatgacggcggagcggtttct	Protospacer
*********************** * *******

2. spacer 1.1|7020|33|NZ_NVYQ01000134|CRISPRCasFinder matches to position: 924-956, mismatch: 2, identity: 0.939

cgcctgcgcgggaatgacggcggtggggtttct	CRISPR spacer
cgcctgcgcgggaatgacggcggagcggtttct	Protospacer
*********************** * *******

3. spacer 1.1|7020|33|NZ_NVYQ01000134|CRISPRCasFinder matches to position: 831-863, mismatch: 2, identity: 0.939

cgcctgcgcgggaatgacggcggtggggtttct	CRISPR spacer
cgcctgcgcgggaatgacggcggagcggtttct	Protospacer
*********************** * *******

4. spacer 1.1|7020|33|NZ_NVYQ01000134|CRISPRCasFinder matches to position: 5918-5950, mismatch: 2, identity: 0.939

cgcctgcgcgggaatgacggcggtggggtttct	CRISPR spacer
cgcctgcgcgggaatgacggcggagcggtttct	Protospacer
*********************** * *******

5. spacer 1.1|7020|33|NZ_NVYQ01000134|CRISPRCasFinder matches to position: 1554-1586, mismatch: 2, identity: 0.939

cgcctgcgcgggaatgacggcggtggggtttct	CRISPR spacer
cgcctgcgcgggaatgacggcggagcggtttct	Protospacer
*********************** * *******

6. spacer 1.1|7020|33|NZ_NVYQ01000134|CRISPRCasFinder matches to position: 2437-2469, mismatch: 2, identity: 0.939

cgcctgcgcgggaatgacggcggtggggtttct	CRISPR spacer
cgcctgcgcgggaatgacggcggagcggtttct	Protospacer
*********************** * *******

7. spacer 1.1|7020|33|NZ_NVYQ01000134|CRISPRCasFinder matches to position: 677-709, mismatch: 2, identity: 0.939

cgcctgcgcgggaatgacggcggtggggtttct	CRISPR spacer
cgcctgcgcgggaatgacggcggagcggtttct	Protospacer
*********************** * *******

8. spacer 1.1|7020|33|NZ_NVYQ01000134|CRISPRCasFinder matches to position: 165-197, mismatch: 2, identity: 0.939

cgcctgcgcgggaatgacggcggtggggtttct	CRISPR spacer
cgcctgcgcgggaatgacggcggagcggtttct	Protospacer
*********************** * *******

9. spacer 1.1|7020|33|NZ_NVYQ01000134|CRISPRCasFinder matches to position: 18-50, mismatch: 2, identity: 0.939

cgcctgcgcgggaatgacggcggtggggtttct	CRISPR spacer
cgcctgcgcgggaatgacggcggagcggtttct	Protospacer
*********************** * *******

10. spacer 1.1|7020|33|NZ_NVYQ01000134|CRISPRCasFinder matches to position: 80-112, mismatch: 2, identity: 0.939

cgcctgcgcgggaatgacggcggtggggtttct	CRISPR spacer
cgcctgcgcgggaatgacggcggagcggtttct	Protospacer
*********************** * *******

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_NVYQ01000134_1	1.1\|7020\|33\|NZ_NVYQ01000134\|CRISPRCasFinder	7020-7052	33	NC_009468	Acidiphilium cryptum JF-5 plasmid pACRY02, complete sequence	178343-178375	6	0.818

1. spacer 1.1|7020|33|NZ_NVYQ01000134|CRISPRCasFinder matches to NC_009468 (Acidiphilium cryptum JF-5 plasmid pACRY02, complete sequence) position: , mismatch: 6, identity: 0.818

cgcctgcgcgggaatgacggcggtggggtttct----	CRISPR spacer
cgcctgcgcgggcatgacggcggt----tttcggcac	Protospacer
************ ***********    ****

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

12. NZ_NVYQ01000005

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_NVYQ01000005_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_NVYQ01000005_1

6581-6683

Orphan

I-E

Consensus_repeat	Method
TGGATTCCCGCCTACGCGGGAATGACGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_NVYQ01000005_1

>merge|NZ_NVYQ01000005|1|6581-6683|CRISPRCasFinder
TGGATTCCCGCCTACGCGGGAATGACGAGTCAGAAGTTACTCGAAACTTAAAAAACCGAAATCGAACGAACTGGATGGATTCCCGCCTGCGCGGGAATGACGA

>NZ_NVYQ01000005|1|1|6581-6683|CRISPRCasFinder
TGGATTCCCGCCTACGCGGGAATGACGA	GTCAGAAGTTACTCGAAACTTAAAAAACCGAAATCGAACGAACTGGA
TGGATTCCCGCCTGCGCGGGAATGACGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_NVYQ01000005.1\|WP_002220831.1\|3500_3974_+\|hemerythrin-domain-containing-protein	unknown	unknown	gnl\|CDD\|225402
NZ_NVYQ01000005.1\|WP_002226292.1\|7027_8569_+\|OFA-family-MFS-transporter	unknown	unknown	gnl\|CDD\|340911
NZ_NVYQ01000005.1\|WP_025460340.1\|5061_6417_+\|exodeoxyribonuclease-VII-large-subunit	unknown	unknown	gnl\|CDD\|234714
NZ_NVYQ01000005.1\|WP_002220827.1\|154_1543_-\|DEAD/DEAH-box-helicase	unknown	unknown	gnl\|CDD\|223587
NZ_NVYQ01000005.1\|WP_002213213.1\|2870_3203_-\|thioredoxin-TrxA	unknown	unknown	gnl\|CDD\|200072
NZ_NVYQ01000005.1\|WP_003702784.1\|9695_9848_-\|hypothetical-protein	unknown	unknown	unknown
NZ_NVYQ01000005.1\|WP_002225149.1\|13243_14176_-\|VirK/YbjX-family-protein	unknown	unknown	gnl\|CDD\|225537
NZ_NVYQ01000005.1\|WP_002217011.1\|16121_16775_+\|MarC-family-protein	unknown	unknown	gnl\|CDD\|225006
NZ_NVYQ01000005.1\|WP_002219137.1\|15680_15971_-\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatC	unknown	unknown	gnl\|CDD\|178810
NZ_NVYQ01000005.1\|WP_033908556.1\|4043_4865_-\|NAD(+)-synthase	unknown	unknown	gnl\|CDD\|238309
NZ_NVYQ01000005.1\|WP_002222330.1\|1870_2818_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|236981
NZ_NVYQ01000005.1\|WP_025460115.1\|14172_15618_-\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatA	unknown	unknown	gnl\|CDD\|234572
NZ_NVYQ01000005.1\|WP_025460117.1\|8637_9687_-\|rRNA-pseudouridine-synthase	unknown	unknown	gnl\|CDD\|224108
NZ_NVYQ01000005.1\|WP_002219133.1\|9907_10540_+\|pyridoxamine-5'-phosphate-oxidase	unknown	unknown	gnl\|CDD\|223337
NZ_NVYQ01000005.1\|WP_025460116.1\|11770_13201_-\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatB	unknown	unknown	gnl\|CDD\|235489
NZ_NVYQ01000005.1\|WP_002213233.1\|10668_11679_-\|2Fe-2S-iron-sulfur-cluster-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|181058

Protein	Function_ID	Function_description	E-value
NZ_NVYQ01000005.1\|WP_002220831.1\|3500_3974_+\|hemerythrin-domain-containing-protein	gnl\|CDD\|225402	COG2846, COG2846, Regulator of cell morphogenesis and NO signaling [Cell division and chromosome partitioning].	5.21345e-81
NZ_NVYQ01000005.1\|WP_002226292.1\|7027_8569_+\|OFA-family-MFS-transporter	gnl\|CDD\|340911	cd17353, MFS_OFA_like, Oxalate:formate antiporter (OFA) and similar proteins of the Major Facilitator Superfamily of transporters. This subfamily is composed of Oxalobacter formigenes oxalate:formate antiporter (OFA or OxlT) and similar proteins. O. formigenes, a commensal found in the gut of animals and humans, plays an important role in clearing dietary oxalate from the intestinal tract, which is carried out by OFA/OxlT, an anion transporter that facilitates the exchange of divalent oxalate with monovalent formate, the product of oxalate decarboxylation. This exchange generates an electrochemical proton gradient and is the source of energy for ATP synthesis in this cell. The OFA-like subfamily belongs to the Monocarboxylate transporter -like (MCT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.55731e-124
NZ_NVYQ01000005.1\|WP_025460340.1\|5061_6417_+\|exodeoxyribonuclease-VII-large-subunit	gnl\|CDD\|234714	PRK00286, xseA, exodeoxyribonuclease VII large subunit; Reviewed.	0
NZ_NVYQ01000005.1\|WP_002220827.1\|154_1543_-\|DEAD/DEAH-box-helicase	gnl\|CDD\|223587	COG0513, SrmB, Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis].	7.71893e-164
NZ_NVYQ01000005.1\|WP_002213213.1\|2870_3203_-\|thioredoxin-TrxA	gnl\|CDD\|200072	TIGR01068, Thioredoxin-like_protein_slr0233, thioredoxin. Several proteins, such as protein disulfide isomerase, have two or more copies of a domain closely related to thioredoxin. This model is designed to recognize authentic thioredoxin, a small protein that should be hit exactly once by this model. Any protein that hits once with a score greater than the second (per domain) trusted cutoff may be taken as thioredoxin. [Energy metabolism, Electron transport].	8.1783e-48
NZ_NVYQ01000005.1\|WP_002225149.1\|13243_14176_-\|VirK/YbjX-family-protein	gnl\|CDD\|225537	COG2990, VirK, Uncharacterized protein conserved in bacteria [Function unknown].	5.21789e-130
NZ_NVYQ01000005.1\|WP_002217011.1\|16121_16775_+\|MarC-family-protein	gnl\|CDD\|225006	COG2095, MarC, Multiple antibiotic transporter [Intracellular trafficking and secretion].	6.47066e-49
NZ_NVYQ01000005.1\|WP_002219137.1\|15680_15971_-\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatC	gnl\|CDD\|178810	PRK00034, gatC, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC.	2.73539e-32
NZ_NVYQ01000005.1\|WP_033908556.1\|4043_4865_-\|NAD(+)-synthase	gnl\|CDD\|238309	cd00553, NAD_synthase, NAD+ synthase is a homodimer, which catalyzes the final step in de novo nicotinamide adenine dinucleotide (NAD+) biosynthesis, an amide transfer from either ammonia or glutamine to nicotinic acid adenine dinucleotide (NaAD). The conversion of NaAD to NAD+ occurs via an NAD-adenylate intermediate and requires ATP and Mg2+. The intemediate is subsequently cleaved into NAD+ and AMP. In many prokaryotes, such as E. coli , NAD synthetase consists of a single domain and is strictly ammonia dependent. In contrast, eukaryotes and other prokaryotes have an additional N-terminal amidohydrolase domain that prefer glutamine, Interestingly, NAD+ synthases in these prokaryotes, can also utilize ammonia as an amide source .	2.88783e-85
NZ_NVYQ01000005.1\|WP_002222330.1\|1870_2818_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|236981	PRK11783, rlmL, bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL.	1.85146e-163
NZ_NVYQ01000005.1\|WP_025460115.1\|14172_15618_-\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatA	gnl\|CDD\|234572	PRK00012, gatA, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA.	0
NZ_NVYQ01000005.1\|WP_025460117.1\|8637_9687_-\|rRNA-pseudouridine-synthase	gnl\|CDD\|224108	COG1187, RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis].	1.13851e-85
NZ_NVYQ01000005.1\|WP_002219133.1\|9907_10540_+\|pyridoxamine-5'-phosphate-oxidase	gnl\|CDD\|223337	COG0259, PdxH, Pyridoxamine-phosphate oxidase [Coenzyme metabolism].	1.26438e-116
NZ_NVYQ01000005.1\|WP_025460116.1\|11770_13201_-\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatB	gnl\|CDD\|235489	PRK05477, gatB, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB.	0
NZ_NVYQ01000005.1\|WP_002213233.1\|10668_11679_-\|2Fe-2S-iron-sulfur-cluster-binding-domain-containing-protein	gnl\|CDD\|181058	PRK07609, PRK07609, CDP-6-deoxy-delta-3,4-glucoseen reductase; Validated.	4.06255e-140

>NZ_NVYQ01000005.1|WP_025460340.1|5061_6417_+|exodeoxyribonuclease-VII-large-subunit
MSDFFHSDVLSVSELNAFAKSILENHLAGLWIAGEVSNLTRAASGHYYFSLKDSRAQVRCAMFKGAAARLAKPLKEGDHIEVSGKISIYEARGEFQITVNEVRLKGLGQLYEAYERLKAQLQAEGAFAAERKKPLPARPQCIGIVTSLAAAALRDVVTTLKRRAPEIPVIVYPTAVQGAGSEFQIAQAIKTASQRAECDVLIVCRGGGSIEDLWAFNEEPVVRAIEACTVPVVSGVGHETDFTLADFVADVRAPTPTGAAELVSPNRQESLHRLAQAQGRLKTVLEQRYFDASQKLDWLARQIRHPRQKLDEQRASISKLAQTLSYSMTQNVRTHTARFERQTQALKHCRPDVSVYKHNIDRFQTALSHAFHQLLTHRRQSLTAQAALLEAVSPQHILERGFSVVKNTRGQVIRNADVLKQGQKLHIIFADGETDVRVSKEQGQQDLFDCI
>NZ_NVYQ01000005.1|WP_033908556.1|4043_4865_-|NAD(+)-synthase
MMRIFSTGGKMDTQAVITHIARWLDEYAARANAKGFVVGVSGGIDSAVVSALAARTGRTTLLLDMPIRQHPDQLERARLHIRNLQRQYANVSAQTVDLTDTFQTFEQTVGVHQTAFDNQPLSLANARSRLRMLTLYYYGQIHGLLVTGTGNKIEDFGVGFFTKYGDGGVDISPIADLTKTQVYRLAEALGVDEAIQKAPPTDGLWDTERTDEEQMGASYPELEWAMGVYGTRKPEDFEGRQREVLEIYTRLHRAMQHKINPIPVCRIPPELLG
>NZ_NVYQ01000005.1|WP_002220831.1|3500_3974_+|hemerythrin-domain-containing-protein
MTDFSVWETAPFGATVDHILQRYHNVHRAQFEELVPLAQKVAQVHADTFPAEIAGLLAYMQNELLMHMMKEERMLFPMINQGVGRGAAMPISVMMHEHEEHDRAIARLKELTDNFQPPEGACGSWTRLYALAKEMVEDLNDHIHLENDILFARVLDS
>NZ_NVYQ01000005.1|WP_002213213.1|2870_3203_-|thioredoxin-TrxA
MSSELIVHTSDAAFEKDVLNADIPVLLDFWAPWCGPCKMIAPILDDIAAEFEGRLKVVKINIDDNEATPSRFGVRGIPTLMVFKNGEVVATKVGALAKGQLTAFVEASIA
>NZ_NVYQ01000005.1|WP_002222330.1|1870_2818_+|class-I-SAM-dependent-methyltransferase
MTDITPFANRLGKNIKHLMKWAKRNGIEAWRIYDRDIPQFPFAADVYGDRIHLQEYDTGWLMRPEEYEAWLAEVLEAVAFVTGFEPEQIRLKRRERQKGLQQYEKTGKAGDDFVITENGRKFWVNLDKYLDTGLFLDHRNTRKKVGETAAGKRFLNLFSYTGSFTVYAATGGAASSETVDLSNTYLDWARRNFELNGIDTERHKIVRADVFQYLQTAYGEGRRFDLIVMDPPSFSNSKKMSDILDIQRDHKKLIDGAVKLLASDGILYFSNNLRSFVLDDLVSEQYAVKDISKQSVPEDFRNKKIHRCWEIRHKS
>NZ_NVYQ01000005.1|WP_002220827.1|154_1543_-|DEAD/DEAH-box-helicase
MSIKFADLNLDKNILSAVSSEGYESPTPIQAQAIPFALEGRDIMASAQTGSGKTAAFLLPTLQRLTKRSEKPGKGPRALVLTPTRELAAQVEKNALAYAKNMRWFRTVSIVGGASFGYQTRALSKPVDLIVATPGRLMDLMQSGKVDFERLEVLILDEADRMLDMGFIDDIETIVEATPTDRQTLLFSATWDGAVGKLARKLTKDPEIIEVERVDDQGKIEEQLLYCDDMRHKNRLLDHILRDANIDQCVIFTSTKAMTEVIADELYEKGFAANCLHGDMPQGWRNRTLMDLRKGRCKILVATDVAARGIDVPTITHVINYDLPKQAEDYVHRIGRTGRAGRTGIAITFAEVNEYVKVHKIEKYINRKLPELTIEGMEPTRKRKSAGGKPKGKGGWGDRKSGGRRGDHKPGKEGFGGKTRGEGFKKEGFKKDGFKKTGEGFKGKRKAGDSFAGRGERRYKDR
>NZ_NVYQ01000005.1|WP_002226292.1|7027_8569_+|OFA-family-MFS-transporter
MKFLDREASIAKPGFNRWLVPPAALAVHLAIGQIYAYSVFNAPLTKLIGITESAAGDWKLTTVGWIFSIALAMLGASAALFGTWMERVGPRKAIFAAACCFSLGFFVSAFGVRTHNLFLLYLGNGVIGGVGLGLGYIGPVSTLMKWFPDKPGMATGLAIMGFGGGAMLASPLSVSLMNAFSNAASVGVAETFAVLGLLYLALMMFGAFTIRVPADGWKPEGYTAPKTQNKLVSSNHVNVSQAMKTPQFWLLFWVLCLNVTAGIGVLGQASVMIQELFSETSIGRQAAVGAGAAAGFVSLLSLFNMGGRFLWSSVSDKIGRKNTYTIFFVLGSLLYFAVPSIGEGGSKALFIIGFCVIISMYGGGFAAIPAYLKDLFGTYQVGAIHGRILLAWSTAAVIGPVLVNYIRQSQIDSGIPAAQAYSVTMYIMACLLIIGLLCNLAVKSVHEKHHEKDIKTAAHSGNPDDETAISDAYLVGEKVSGGGISVWWRWALAVIPLAYGVVMVFVKALDLFS
>NZ_NVYQ01000005.1|WP_025460117.1|8637_9687_-|rRNA-pseudouridine-synthase
MSKQPTSKRQWRDGAAPSAKKTAKPFKSKAHPKGETRKTASQPYGQKASDGIKPQNLPKQRAAKAKKLVVRNPNQKIMEHARDLKERRSDLSRMEPERLQKVLAASGVGSRREMEEWINNGWVTVNGKTAQLGDKVTPDDHVTVKGSIIKLKWADRLPRIILYYKQEGEIVSRDDPQGRVSIFDRLPQAASSRWVAIGRLDINTSGLLILTTSGELVQRFAHPSFEVEREYAVRVLGGLTGEQMRVLTEEGVMLEDGLAKVERIREQGGEGANKWYNVVIKEGRNREVRRIFESQGLTVSRLVRIGFGPIGLPNRLKRGQFYELNPAEVANIIKWADMLLPGERRRKKA
>NZ_NVYQ01000005.1|WP_003702784.1|9695_9848_-|hypothetical-protein
MHKLCPQSRSDDFIRKTAASGTISNRPTEGGILSTRPAAHAAEEPPYQAS
>NZ_NVYQ01000005.1|WP_002219133.1|9907_10540_+|pyridoxamine-5'-phosphate-oxidase
MDLHNIREDYSKRELSEGDCADNPIEQFERWLDEAVRAQVNEPTAVNVAAVDGRGRPNSRMVLLKEVNSEGFVFFTNYHSRKGRSLDAHPFAAMTFFWPELERQVRVEGRVERLAEKLSDEYFESRPYQSRLGAWASAQSEVIPNKAVLVAKAAAVGLKHPLHVPRPPHWGGYIVIPDLIEFWQGRPSRLHDRIQYRLLDGGWIRERLSP
>NZ_NVYQ01000005.1|WP_002213233.1|10668_11679_-|2Fe-2S-iron-sulfur-cluster-binding-domain-containing-protein
MNHTVTLPDQTTFAANDGETVLSAAARQNLNLPHSCKNGVCGQCKAELVSGDIQMGGHSEQALSEAEKAQGKILMCRTTAQSDISLNIPGYNPNALPVRTLPARIESMVFKHDVALLKLALPKAPPFAFYAGQYIDLLLPGNVSRSYSIANPPDQEGILELHIRRRENGVCSEMIFGSEPKVKEKGIVRVKGPLGSFTLQEDSGKPVILLATGTGYAPIRSILLDLIRQDSSRAVHFYWGARHQDDLYALKEAQGLACRLKNACFTPVLSRPGEGWQGRKGHVQDIAAQDHPDLSEYEVFACGSPAMTEQTKNLFVQQHKLPENLFFSDAFTPSAS
>NZ_NVYQ01000005.1|WP_025460116.1|11770_13201_-|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatB
MTWETVIGLEIHVQLNTKSKIFSGASTAFGAEPNAHASVVECALPGVLPVMNREVVEKAIKLGLALDAKINRKNVFDRKNYFYPDLPKGYQISQLDLPIVEHGKLEIVVGDDVKTINVTRAHMEEDAGKSVHEGLNGATGIDLNRAGTPLLEVVSEPEMRSAAEAVAYAKALHSLVTWLDICDGNMAEGSFRVDANVSVRPKGQAEFGTRREIKNLNSFRFLEQAINYEAEAQIEILEDGGKVQQATMLFDPEKGETRVMRLKEDAQDYRYFPDPDLLPVIISDAQMQKAKAEMPELPKEMAARFVADYGVSEYDARLLTASRAQAAYFEEAAKESGQGKPTANWMNGELAAALNKAGLELADSPITAPRLAALVGKIADGTLSSKLAKKAFEAMWAEPESTIAEIIEKHGLQQMTDTGAVEAMVDEVLANNAKAVEQFKSGNEKALNAIVGQVMKASKGKANPAQVQELIKAKLA
>NZ_NVYQ01000005.1|WP_002225149.1|13243_14176_-|VirK/YbjX-family-protein
MKQNRTFTFPDFRTVYSYAPLYRLQHLKYTLRKFFGKKEIYAFEQFVNASPIRQGLFLHCPQNAYPLLREFVDRRFNCKRRLDAMTADFLMAEKLFGTDILHQMEDYRFHLVLAHLSDGISLWLNRNDNCVEEGAWSLSLRDEAGNRLYMATFAFVGTHLLTASVQGPAGEEAKDTVRRITKQLHGLRPQQLMVTALQYFAAVLGLDGAMGIAQKHQVKLRWKLKKRVKMNYDAFWQEYGASLERDGYWHLPQTPARKDLADIESKKRSMYRKRYEMLDNMVAEMKDSLKTEARGISDGIQTEKPPRRTA
>NZ_NVYQ01000005.1|WP_025460115.1|14172_15618_-|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatA
MTQYTLKQASVLLQSKQISAVELASAYLAAIAEKNPALNGYITIDQDKTLAEARAADERIAQGNASALTGVPVAYKDIFCQTGWRSACASKMLDNFISPYTATVVQKLLDEGMVTLGRTNMDEFAMGSTNENSFYGAAKNPWNLEHVPGGSSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGITGIKPTYGTVSRFGMVAYASSFDQAGPMAQTAEDCAILLNAMAGFDPKDSTSLEREKEDYTRDLDKPLKGMKIGLPKEYFSEGNSTDVQTALQNTIDLLKAQGAELVEVSLPQTKLSIPAYYVLASAEASTNLSRYDGVRYGHRAAQFGDLEEMYGKTRAEGFGSEVKRRIMIGTYVLSHGYYDAYYLKAQKLRRLVADDFQTAFARCDLILAPTAPTAAPKIGADASPVETYLSDIYTIAVNLAGLPALTLPAGFSGGGLPVGVQLVGNYFAEAKILGAAHQIQLNSDWHGKRPE
>NZ_NVYQ01000005.1|WP_002219137.1|15680_15971_-|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatC
MALTLADVDKIARLSRLHLTAEEKEKSLQELNDIFTMVEQMQTINTDGIEPMAHPHEAALRLREDEVTETDRAAEYQAGAPEVRNRLYIVPQVIEE
>NZ_NVYQ01000005.1|WP_002217011.1|16121_16775_+|MarC-family-protein
MGLGMEIGKLIVAFLVLINPFSALSLYLDLTNGHSTKERRKVARTAAVAVFAVIAVFALIGGTLLKVLGISVGSFQVGGGILVLLIAISMMNGNDNPAKQNLGAQPETGQARPARNAGAIAVVPIAIPITIGPGGISTVIIYASAAKTYSDIALIIVAGLVVSAICYAILIVAGKVSRLLGATGLTILNRIMGMMLAAVSVEIIVSGLKTIFPQLAG

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

13. NZ_NVYQ01000147

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

14. NZ_NVYQ01000093

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_NVYQ01000093_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_NVYQ01000093_1

30-593

TypeII

Consensus_repeat	Method
GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT	PILER-CR
GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT	CRISPRCasFinder
GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT	CRT

8 spacers

cas2,cas1,cas9

The CRISPR arrays of NZ_NVYQ01000093_1

>merge|NZ_NVYQ01000093|1|30-593|PILER-CR,CRISPRCasFinder,CRT
GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAATTGCGGAAAGCCTCCATGCTTTGCAGCACTGGTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAATAATTTGCGCCTTGCTGCATTGTGTAGTTTGGTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAATTTCTTCCCGATTGAGGTTGCTAGTTTTGTCGTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAATAGTCAATGAATCACTAAAAGCCAAGTCAGAGTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAATTTTTTCGATTTTTTATATTGAGCGTTTTTGGTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAATAAAAAAGTTGCGGGATAAGTTACAGTTTGAGTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAATTGAATCGATATCGAGCCTGCCGGCGGGGGCGTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAATAAACCGAGTTCAACCGCCACGTCGAAGACAGTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT

>NZ_NVYQ01000093|1|1|30-593|PILER-CR
GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT	TGCGGAAAGCCTCCATGCTTTGCAGCACTG
GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT	AATTTGCGCCTTGCTGCATTGTGTAGTTTG
GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT	TTCTTCCCGATTGAGGTTGCTAGTTTTGTC
GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT	AGTCAATGAATCACTAAAAGCCAAGTCAGA
GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT	TTTTTCGATTTTTTATATTGAGCGTTTTTG
GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT	AAAAAAGTTGCGGGATAAGTTACAGTTTGA
GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT	TGAATCGATATCGAGCCTGCCGGCGGGGGC
GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT	AAACCGAGTTCAACCGCCACGTCGAAGACA
GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT

>NZ_NVYQ01000093|1|1|30-593|CRISPRCasFinder
GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT	TGCGGAAAGCCTCCATGCTTTGCAGCACTG
GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT	AATTTGCGCCTTGCTGCATTGTGTAGTTTG
GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT	TTCTTCCCGATTGAGGTTGCTAGTTTTGTC
GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT	AGTCAATGAATCACTAAAAGCCAAGTCAGA
GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT	TTTTTCGATTTTTTATATTGAGCGTTTTTG
GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT	AAAAAAGTTGCGGGATAAGTTACAGTTTGA
GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT	TGAATCGATATCGAGCCTGCCGGCGGGGGC
GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT	AAACCGAGTTCAACCGCCACGTCGAAGACA
GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT

>NZ_NVYQ01000093|1|1|30-593|CRT
GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT	TGCGGAAAGCCTCCATGCTTTGCAGCACTG
GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT	AATTTGCGCCTTGCTGCATTGTGTAGTTTG
GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT	TTCTTCCCGATTGAGGTTGCTAGTTTTGTC
GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT	AGTCAATGAATCACTAAAAGCCAAGTCAGA
GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT	TTTTTCGATTTTTTATATTGAGCGTTTTTG
GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT	AAAAAAGTTGCGGGATAAGTTACAGTTTGA
GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT	TGAATCGATATCGAGCCTGCCGGCGGGGGC
GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT	AAACCGAGTTCAACCGCCACGTCGAAGACA
GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_NVYQ01000093.1\|WP_002214553.1\|9668_9872_+\|hypothetical-protein	unknown	unknown	unknown
NZ_NVYQ01000093.1\|WP_025460255.1\|12923_14834_-\|NADH-dependent-dehydratase-PglD	unknown	unknown	gnl\|CDD\|224011
NZ_NVYQ01000093.1\|WP_002235163.1\|975_1890_-\|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|274694
NZ_NVYQ01000093.1\|WP_025460253.1\|10685_11522_+\|PHP-domain-containing-protein	unknown	unknown	gnl\|CDD\|223686
NZ_NVYQ01000093.1\|WP_002219804.1\|9457_9691_+\|RNA-binding-S4-domain-containing-protein	unknown	unknown	gnl\|CDD\|225303
NZ_NVYQ01000093.1\|WP_025460681.1\|5483_8918_-\|DNA-polymerase-III-subunit-alpha	unknown	unknown	gnl\|CDD\|235554
NZ_NVYQ01000093.1\|WP_025460251.1\|1956_5205_-\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	COG3513_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226044
NZ_NVYQ01000093.1\|WP_025460254.1\|11575_12868_-\|valine--pyruvate-transaminase	unknown	unknown	gnl\|CDD\|226485
NZ_NVYQ01000093.1\|WP_002214566.1\|656_983_-\|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226043
NZ_NVYQ01000093.1\|WP_002233000.1\|9976_10378_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_NVYQ01000093.1\|WP_025460255.1\|12923_14834_-\|NADH-dependent-dehydratase-PglD	gnl\|CDD\|224011	COG1086, COG1086, Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism].	0
NZ_NVYQ01000093.1\|WP_002235163.1\|975_1890_-\|type-II-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274694	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is a prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 variant of the NMENI subtype of CRISPR/Cas system.	2.8744e-139
NZ_NVYQ01000093.1\|WP_025460253.1\|10685_11522_+\|PHP-domain-containing-protein	gnl\|CDD\|223686	COG0613, COG0613, Predicted metal-dependent phosphoesterases (PHP family) [General function prediction only].	4.29598e-84
NZ_NVYQ01000093.1\|WP_002219804.1\|9457_9691_+\|RNA-binding-S4-domain-containing-protein	gnl\|CDD\|225303	COG2501, COG2501, S4-like RNA binding protein [Replication, recombination, and repair].	4.61237e-27
NZ_NVYQ01000093.1\|WP_025460681.1\|5483_8918_-\|DNA-polymerase-III-subunit-alpha	gnl\|CDD\|235554	PRK05673, dnaE, DNA polymerase III subunit alpha; Validated.	0
NZ_NVYQ01000093.1\|WP_025460251.1\|1956_5205_-\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	gnl\|CDD\|226044	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms].	0
NZ_NVYQ01000093.1\|WP_025460254.1\|11575_12868_-\|valine--pyruvate-transaminase	gnl\|CDD\|226485	COG3977, COG3977, Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism].	0
NZ_NVYQ01000093.1\|WP_002214566.1\|656_983_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	1.33449e-61

>NZ_NVYQ01000093.1|WP_002214566.1|656_983_-|CRISPR-associated-endonuclease-Cas2
MSEAKFMRIIVFFDLPVITAAKRKAANQFRQFLLKDGYQMLQLSVYSRIVKGRDSLQKHHNRLCANLPQEGSIRCLEITEKQYAAMKLLLGELKTQEKKVNSDQLLLF
>NZ_NVYQ01000093.1|WP_002235163.1|975_1890_-|type-II-CRISPR-associated-endonuclease-Cas1
MTWRSLLIQNGGKLSLQRRQLLIQQNGESHTVPLEDIAVIIIENRETLITAPLLSALAKHGATLLTCDEQFLPCGQWLPYAQYHRQLKILKLQLNISEPLKKQLWQHIVRQKILNQAFVADETGNDLAAKRLRTLASEVRSGDTGNREAQAAALYFQALFGEKFTRNDNNAVNAALNYTYAVLRAAVARALTLYGWLPALGLFHRSELNPFNLADDFIEPLRPLADLTVIHLYEQGRLKTELTLGIKQHLIKILYYQTSIERQHFSTLAAIDKMISSFQAGVTDKNAKQLKLPEILPLKEYQYE
>NZ_NVYQ01000093.1|WP_025460251.1|1956_5205_-|type-II-CRISPR-RNA-guided-endonuclease-Cas9
MAAFKPNPINYILGLDIGIASVGWAMVEIDEDENPICLIDLGVRVFERAEVPKTGDSLAAARRLARSVRRLTRRRAHRLLRARRLLKREGVLQAADFDENGLIKSLPNTPWQLRAAALDRKLTPLEWSAVLLHLIKHRGYLSQRKNEGETADKELGALLKGVADNAHALQTGDFRTPAELALNKFEKESGHIRNQRGDYSHTFSRKDLQAELILLFEKQKEFGNPHVSGGLKEGIETLLMTQRPALSGDAVQKMLGHCTFEPAEPKAAKNTYTAERFIWLTKLNNLRILEQGSERPLTDTERATLMDEPYRKSKLTYAQARKLLGLEDTAFFKGLRYGKDNAEASTLMEMKAYHAISRALEKEGLKDKKSPLNLSPELQDEIGTAFSLFKTDEDITGRLKDRVQPEILEALLKHISFDKFVQISLKALRRIVPLMEQGKRYDEACAEIYGDHYGKKNTEEKIYLPPIPADEIRNPVVLRALSQARKVINGVVRRYGSPARIHIETAREVGKSFKDRKEIEKRQEENRKDREKAAAKFREYFPNFVGEPKSKDILKLRLYEQQHGKCLYSGKEINLGRLNEKGYVEIDHALPFSRTWDDSFNNKVLVLGSENQNKGNQTPYEYFNGKDNSREWQEFKARVETSRFPRSKKQRILLQKFDEDGFKERNLNDTRYVNRFLCQFVADRMRLTGKGKKRVFASNGQITNLLRGFWGLRKVRAENDRHHALDAVVVACSTVAMQQKITRFVRYKEMNAFDGKTIDKETGEVLHQKTHFPQPWEFFAQEVMIRVFGKPDGKPEFEEADTPEKLRTLLAEKLSSRPEAVHEYVTPLFVSRAPNRKMSGQGHMETVKSAKRLDEGVSVLRVPLTQLKLKDLEKMVNREREPKLYEALKARLEAHKDDPAKAFAEPFYKYDKAGNRTQQVKAVRVEQVQKTGVWVRNHNGIADNATMVRVDVFEKGDKYYLVPIYSWQVAKGILPDRAVVQGKDEEDWQLIDDSFNFKFSLHPNDLVEVITKKARMFGYFASCHRGTGNINIRIHDLDHKIGKNGILEGIGVKTALSFQKYQIDELGKEIRPCRLKKRPPVR
>NZ_NVYQ01000093.1|WP_025460681.1|5483_8918_-|DNA-polymerase-III-subunit-alpha
MTEPTYIPLRLHTEFSITDGMVRIKKLIAKAQEYGLPALGISDLMNEFGLVKFYKACRGAGIKPIGAADVWIGNPNAPDKPFRAMLIIRNDAGYLRLSELLTAAYVGKDRNVHHAELNPEWLENGDNSGLICLSGAHYGEVGVNLLNGNEDAARAAALKYAAWFPDAFYLELQRLPERPEWEACVSGSVKLAEELGLPVVATHPTQFMSRDDFNAHEARVCIAGGWVLTDKKRPRDFTPGQFFIPPETMAERFADLPEALENTVEIAKRCNLHITLGKNFLPLFPTPDGLSLDDYLIKLSNEGLQERMVQLYPDEAERAAKMPEYQKRLDFELNIIIQMKFPGYFLIVQDFINWAKTHGCPVGPGRGSGAGSLVAYSLKITDLDPLKYALLFERFLNPERVSMPDFDVDFCQANRGRVIEYVREKYGAEAVSQIVTFGTMSSKAVIRDVGRVLELPFMLCDKLSKLIPLEANKPLGLDDAMKAEPQIQELIEAEEADELITLAKKLEDLTRGLGMHAGGVLIAPGKISDYSPVYQADESASPVSMYDKGDVEDVGLVKFDFLGLRNLTIIEMAQNNIKNTTGDIVDVGKIPLDDQAAYQIFRDANTTAVFQFESTGMKKMLKTAHTTKFEELIAFVSLYRPGPMDNIPDFVARMKGQEFQYIHPLLEGILAPTYGIMVYQEQVMQAAQIIGGYSLGGADLLRRAMGKKKPEEMVKHREIFAEGAAKQGISREKSDEIFNYMEKFAGYGFNKSHAAAYALISYQTAWLKAHYPAEFMAATMSSELDNTDQLKHFYDDCRANGIEFLPPDINESDYRFTPYPNMKIRYALGAIKGTGEAAVESIIAARQSGGKFTGLLNFCERVGKEHMNRRTLEALIRGGAFDSIEPNRAMLLANIDLAMDNADQKAANANQGGLFDMMEDAIEPVRLIDAPMWSESEKLAEEKTVIGFYLSGHPFGPYAQEVRQIAPQKLSKLKPQDSVRLAGFVTAVRTMMGKRGKIAFVSLEDLSGQVEIMVGGQTLENCADCLKADQVLIIESKVSRDDYGGGDGLRILANQVMTLQTARERYARSLSLALAPHHDIGGLVQLLAAHQLPDTPRIPLQLSYANEKASGRLQVPPKWTVTPSSALFGELETLLGSRSVRVNW
>NZ_NVYQ01000093.1|WP_002219804.1|9457_9691_+|RNA-binding-S4-domain-containing-protein
MEATVYLEDNEYIALCDLLKLAGLAESGGQAKALIAEGLVSRNGETETRKTAKIRGGEVIEFDGARLEIADGYDPEA
>NZ_NVYQ01000093.1|WP_002214553.1|9668_9872_+|hypothetical-protein
MDMTLKHKAEALLGEPLLDEPVRPESWECCGSDCGEACIQTIYWADKARYDAQRRKLKEAGWSDDAV
>NZ_NVYQ01000093.1|WP_002233000.1|9976_10378_+|hypothetical-protein
MAIYDLNEIVTSAALGMYKGKWQNMDFEQVLQDIVQETDFTYSWEYGENWAIFCLNEKSVGMLCKQIPFAIIENEKLSQKIYQEYPWILTQQVYHFDTDKILLNKYVCKLTIGIMSAISQEPISLQDLYVDTV
>NZ_NVYQ01000093.1|WP_025460253.1|10685_11522_+|PHP-domain-containing-protein
MIDLHCHSTVSDGMLSPAEVVRLAHQNGCTLLALTDHDHTGGIAEARAEADRLGLRLINGVEISVTWRGRTIHVVGLDFDEQDENLQNLLAQVRQGRLKRLEAIAAKLEKKGIGGAYDGALALAANKEMVSRTHVAEFLIQAGHVKNKQQAFTKYLGDGKSCAVRHEWATLEDCVSAVNGAGGMAVIAHPMRYDLSATAKRNLFEEFKSLGGAGIEVHSGNCCKNDRLNYALLAERFGMLASAGSDFHRLNDFSGGILGACPELPENCRPVWAHFSRH
>NZ_NVYQ01000093.1|WP_025460254.1|11575_12868_-|valine--pyruvate-transaminase
MQFSAFGEKFTQHSGILQLMDDLGDALKSDKPVNMLGGGNPARIAEVNAVFADVFSKLAAEHAVENIGNYSNPQGDAALIDALTAFLNREYGWNLTADNIALTNGSQNAFFYLFNLFGGKFKLSDGTSAEKAILLPLAPEYIGYADVHIEGQHFVSVKPKIENVEHEGEAGFFKYRVDFDALENLPELKAGKIGAICCSRPTNPTGNVLTDGEMARLDALAREHGIPLIIDNAYGMPFPNIIYSDVTLNWHENIILCFSLSKVGLPGVRTGIIVAAPEVVKAVSSLNAIVNLAPTRFGAAIAVPLLESGEMKRLADQVIRPFYHNQAQTAVSLLKRELGAYPMKIHKPEGAIFLWLWFENLPVSSQTLYEMLKAEGTLIIPGEHFFVGIDTQDYPHAGECIRMSIAQDAQTLEKGIAAIGKTVRKLYDNV
>NZ_NVYQ01000093.1|WP_025460255.1|12923_14834_-|NADH-dependent-dehydratase-PglD
MTLETLLALPRNIKKICFLIHDFLMIFIAFWFTQSLKADYSNEWFDPTNWQSFLLTAPLTIGLFVRMGLYRAVTRFISFRILSTALAGSLASAVLFFLNTLIFEERLRLALPIVYFLLLFVSVTGSRMVLRGLLSEHPKKQMIPVIIYGAGQAGRQLLEAVKQMREYSAAAFVDDDPKLWHTVIYDLAVYQPDAIAFLIERYGVEKILLAIPGATQEQRRRIINKLEAYPCEVLTIPGMKDLMDGKISIGTLKKISVSDLLGRDSVAPDNRLMSADIEGKTVMVTGAGGSIGSELCRQIIRRRPEKLLLFELSEFALYAVEKELRETCIQKRLDTEILPFLGSVQNRTLLEHVMTAFSVATVYHAAAYKHVPMVEFNTVEGIRNNIFGTLECALAATTSGVETFVLISTDKAVRPTNTMGASKRMAELCLQALAAEPGQKTRFSMVRFGNVLGSSGSVVPLFEKQIAEGGPLTLTHPEITRYFMTIPEAAQLVIQAGAMGTGGDVFVLDMGESVKIIDLARQMITLSGLKPNTPEQPDGDIEILITGLRPGEKLYEELLIGDNVRKTGHPRIMTANETMLPWHELSALLDRIRAACDRYDQQAIRTLLINAPTGFAPSDGICDLLWVRETHRKNAV

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Click the colored protein region to show detailed information

Crispr_ID: NZ_NVYQ01000093_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_NVYQ01000093_2

25196-25420

Orphan

I-E

Consensus_repeat	Method
CCGTCATTCCCGCGCAGGCGGGAATC	CRISPRCasFinder

3 spacers

The CRISPR arrays of NZ_NVYQ01000093_2

>merge|NZ_NVYQ01000093|2|25196-25420|CRISPRCasFinder
CCGTTATTCCCTCGAAAACAGAAAACAGAAAACAAAGACGGAAACTTAAGATTCCGTCATTCCCGCGCAGGCGGGAATCCGACTTGTCCGGTTTTGGTTGTTTTTCGTTCCGTAACTTTTGAGCCGTCATTCCCGCGCAGGCGGGAATCTGGAATTTCAATGCCTCAAGAATTTATCGGAAAAAACCAAAACCCTTCCGCCGTCATTCCCACGAAAGTGGGAATC

>NZ_NVYQ01000093|2|2|25196-25420|CRISPRCasFinder
CCGTTATTCCCTCGAAAACAGAAAAC	AGAAAACAAAGACGGAAACTTAAGATT
CCGTCATTCCCGCGCAGGCGGGAATC	CGACTTGTCCGGTTTTGGTTGTTTTTCGTTCCGTAACTTTTGAG
CCGTCATTCCCGCGCAGGCGGGAATC	TGGAATTTCAATGCCTCAAGAATTTATCGGAAAAAACCAAAACCCTTCCG
CCGTCATTCCCACGAAAGTGGGAATC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_NVYQ01000093.1\|WP_002226677.1\|21019_22441_-\|lipopolysaccharide-biosynthesis-protein	unknown	unknown	gnl\|CDD\|225153
NZ_NVYQ01000093.1\|WP_002235156.1\|19952_21023_-\|glycosyltransferase-family-4-protein	unknown	unknown	gnl\|CDD\|340846
NZ_NVYQ01000093.1\|WP_025460682.1\|14881_16057_-\|DegT/DnrJ/EryC1/StrS-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|223476
NZ_NVYQ01000093.1\|WP_002236109.1\|22635_23745_-\|bifunctional-diaminohydroxyphosphoribosylaminopyrimidine-deaminase/5-amino-6-(5-phosphoribosylamino)uracil-reductase-RibD	unknown	unknown	gnl\|CDD\|273015
NZ_NVYQ01000093.1\|WP_002227622.1\|23776_24241_-\|transcriptional-repressor-NrdR	unknown	unknown	gnl\|CDD\|224246
NZ_NVYQ01000093.1\|WP_025460254.1\|11575_12868_-\|valine--pyruvate-transaminase	unknown	unknown	gnl\|CDD\|226485
NZ_NVYQ01000093.1\|WP_002261256.1\|17195_18773_-\|ATP-grasp-domain-containing-protein	unknown	unknown	gnl\|CDD\|237195
NZ_NVYQ01000093.1\|WP_025460257.1\|16528_17209_-\|HAD-family-hydrolase	unknown	unknown	gnl\|CDD\|223943
NZ_NVYQ01000093.1\|WP_025460255.1\|12923_14834_-\|NADH-dependent-dehydratase-PglD	unknown	unknown	gnl\|CDD\|224011
NZ_NVYQ01000093.1\|WP_002222980.1\|24269_25112_-\|class-II-glutamine-amidotransferase	unknown	unknown	gnl\|CDD\|372525

Protein	Function_ID	Function_description	E-value
NZ_NVYQ01000093.1\|WP_002226677.1\|21019_22441_-\|lipopolysaccharide-biosynthesis-protein	gnl\|CDD\|225153	COG2244, RfbX, Membrane protein involved in the export of O-antigen and teichoic acid [General function prediction only].	1.07155e-28
NZ_NVYQ01000093.1\|WP_002235156.1\|19952_21023_-\|glycosyltransferase-family-4-protein	gnl\|CDD\|340846	cd03819, GT4_WavL-like, Vibrio cholerae WavL and similar sequences. This family is most closely related to the GT4 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.	4.59046e-82
NZ_NVYQ01000093.1\|WP_025460682.1\|14881_16057_-\|DegT/DnrJ/EryC1/StrS-aminotransferase-family-protein	gnl\|CDD\|223476	COG0399, WecE, Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane].	2.54072e-158
NZ_NVYQ01000093.1\|WP_002236109.1\|22635_23745_-\|bifunctional-diaminohydroxyphosphoribosylaminopyrimidine-deaminase/5-amino-6-(5-phosphoribosylamino)uracil-reductase-RibD	gnl\|CDD\|273015	TIGR00326, eubact_ribD, riboflavin biosynthesis protein RibD. This model describes the ribD protein as found in Escherichia coli. The N-terminal domain includes the conserved zinc-binding site region captured in the model dCMP_cyt_deam and shared by proteins such as cytosine deaminase, mammalian apolipoprotein B mRNA editing protein, blasticidin-S deaminase, and Bacillus subtilis competence protein comEB. The C-terminal domain is homologous to the full length of yeast HTP reductase, a protein required for riboflavin biosynthesis. A number of archaeal proteins believed related to riboflavin biosynthesis contain only this C-terminal domain and are not found as full-length matches to this model. [Biosynthesis of cofactors, prosthetic groups, and carriers, Riboflavin, FMN, and FAD].	6.1706e-121
NZ_NVYQ01000093.1\|WP_002227622.1\|23776_24241_-\|transcriptional-repressor-NrdR	gnl\|CDD\|224246	COG1327, COG1327, Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains [Transcription].	1.86964e-73
NZ_NVYQ01000093.1\|WP_025460254.1\|11575_12868_-\|valine--pyruvate-transaminase	gnl\|CDD\|226485	COG3977, COG3977, Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism].	0
NZ_NVYQ01000093.1\|WP_002261256.1\|17195_18773_-\|ATP-grasp-domain-containing-protein	gnl\|CDD\|237195	PRK12767, PRK12767, carbamoyl phosphate synthase-like protein; Provisional.	1.78629e-106
NZ_NVYQ01000093.1\|WP_025460257.1\|16528_17209_-\|HAD-family-hydrolase	gnl\|CDD\|223943	COG1011, COG1011, Predicted hydrolase (HAD superfamily) [General function prediction only].	4.93248e-22
NZ_NVYQ01000093.1\|WP_025460255.1\|12923_14834_-\|NADH-dependent-dehydratase-PglD	gnl\|CDD\|224011	COG1086, COG1086, Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism].	0
NZ_NVYQ01000093.1\|WP_002222980.1\|24269_25112_-\|class-II-glutamine-amidotransferase	gnl\|CDD\|372525	pfam13230, GATase_4, Glutamine amidotransferases class-II. This family captures members that are not found in pfam00310.	1.00926e-141

>NZ_NVYQ01000093.1|WP_002222980.1|24269_25112_-|class-II-glutamine-amidotransferase
MCQLLGMNCNTPTDIMFSFEGFRRRGGITDHHADGFGIGFFEGKGVRLFHDDKPSANSPVADLVRAYQIKSENVVAHIRKASQGQTSLANTHPFMREMWGGYWLFAHNGHLIDFFPEQGEFFHPVGTTDSERAFCHILNRLRTRFAARPDDDTLFDAIAGLTHEIRKFGLFNFMLSDGIALFAHASTLLHYIVRQAPFGKARLLDDDVMVDFAEVTTPSDRVAVIATLPLTRDESWSQLAVDELVMFREGNIVRHDRPENPVYMSAEEGLEIARAAGVSV
>NZ_NVYQ01000093.1|WP_002227622.1|23776_24241_-|transcriptional-repressor-NrdR
MKCPFCAHPDTRVADSRLMEERNAVRRRRHCPNCGKRFGTLETAELKMPAVIGPDKKRSPFNAQRLRNDLTAAARKSALTPEQIDETVRLTEHRLYTSGLRDIPSAELADMVLKELLEHNTEAAVRFAALHKRFDNPADFASWLAQAVKTGGKA
>NZ_NVYQ01000093.1|WP_002236109.1|22635_23745_-|bifunctional-diaminohydroxyphosphoribosylaminopyrimidine-deaminase/5-amino-6-(5-phosphoribosylamino)uracil-reductase-RibD
MFSDTDISMMENALRLAALGRFSTSPNPRVGCVIAHGSQVVGQGFHVKAGEPHAEVHALHQAGEMAQGATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAAMRDPNPLVAGKGLALLEVAGIKTECGLLEHQARELNRGFLSRIERRRPFVRLKCAVSLDGKTALSDGSSFWITGEDARADVQVLRAESCAVLTGIGTVLADNPRLNVRAFPTLRQPARIVLDSRLRLPPNSHLVTDGQSPTYIATLERNEDRLHPYREHAHVRILMPSETADSKIDLHHLMRLLADEGFGEIMVEAGSELTSAFLAENLADEIVLYRSPKILGSGKDLFSLLENRAALSAPPLWTPVSSEILGHDIKTVFRKNGNAF
>NZ_NVYQ01000093.1|WP_002226677.1|21019_22441_-|lipopolysaccharide-biosynthesis-protein
MDTKEILGYAAGSIGSAVLAVIILPLLSWYFPADDIGRIVLMQTAAGLTVSVLCLGLDQAYVREYYAAADKDTLFKTLFLPPLLSAAAIAALLLSRPSLPSEILFSLDDAAAGIGLVLFELSFLPIRFLLLVLRMEGRALAFSSAQLVSKLAILLLLPLTVGLLHFPANTAVLTAVYALANLAAAAFLLFQNRCRLKAVRRAPFSSAVLHRGLRYGIPIALSSIAYWGLASADRLFLKKYAGLEQLGVYSMGISFGGAALLFQSIFSTVWTPYIFRAIEANAPPARLSATAESAAALLASALCLTGIFSPLASLLLPENYAAVRFIVVSCMLPPLFCTLVEISGIGLNVVRKTRPIALATLGALAANLLLLGLAVPSGGARGAAVACAASFWLFFVFKTESSCRLWQPLKRLPLYMHTLFCLASSAAYTCFGTPANYPLFAGVWAVYLAGCILRHRKDLHKLFHYLKKQGFPL
>NZ_NVYQ01000093.1|WP_002235156.1|19952_21023_-|glycosyltransferase-family-4-protein
MKIVLTTSMAGLGGTETATVRLGRLLRQHGHDIMLASSDGPLLKEAQALGIRWQPVDFYRGGLFGYLKGMIAYARMLRREQPDIIDCQMARVVPACAIAAKIVSPKTKIIYHSHGLDAATYPKIAKLFDKLGVYIIGNCKHEREKLIRHGFPADRIVYAYNALPPPEFPFWKTVKGCVMLGTLSRLDTVRAVHLMLDIFKKMVDRDMPVRLNVAGIGEEMDNLKAQAERLGIDGKVTFLGGVRDLTAYFKDVDILVNTPHCIGDHGAGVGNNILEAGLYDTPVVTYDMAGISEMVVNGETGYCIPFGDEEAFIAAVDTLVRQPLLREAMGKRLHAHVAALCSDDEIYRTTMAAYTM
>NZ_NVYQ01000093.1|WP_002261256.1|17195_18773_-|ATP-grasp-domain-containing-protein
MSKAVKRLFDIIASASGLIVLSPVFLILAYLIRKNLGSPVFFIQERPGKDGKPFKMVKFRSMRDALDSDGIPLPDSERLTPFGKKLRAASLDELPELWNVLKGDMSLVGPRPLLMQYLPLYDNFQNRRHEMRPGITGWAQVNGRNALSWDEKFACDVWYIDHYSFWLDMKILFLTVKKVLIKEGISAEGEATMPYFTGNQTNEKNNILILSAGRRVELVQDFQTEAARFSDGISVFATDLNPRMSSACHVSDGSFEVPPISADSYIDSIFNLAVRENIGLIIPTIDTELQKLADERERFEAASVHIVVSDSDFIAQCRDKRKTATLFARYGIRSPEIYDRKKLVFPCFAKPYDGSRAIGAKRIDTPADLTPEVLADTKLMFCQFIDIENKFSEFTVDMYYDRQCRLKCAIPRKRLEVRSGEISKGVTCKNSLYQTLLEKMSVLQGARGCITAQFFYNEETGEFYGVEINPRFGGGFPLTYAAGGNYPSRLMREYLGDEEIPFSDDWENNLIMLRYDAKVLVHEND
>NZ_NVYQ01000093.1|WP_025460257.1|16528_17209_-|HAD-family-hydrolase
MKTINPETTVFDLDDTLYSEYEYKLSGIRSVIDTVAALYPDWNSDNLWRNIDPDGKDWLDKLCRHCGFNESEKQVLLWQYRLHRPTLTPYAPPDFLSELTAPFAARALITDGRSLTQRLKLEALGLSSLFDDILISEACSSEKPDSKRFRHLQDKYADKAGCFIYIGDNISKDFIAPNTLGWITIGLLPSGQNIHRHQPESFNTEYHPDFWVNSFQDLVPIIDSNT
>NZ_NVYQ01000093.1|WP_025460682.1|14881_16057_-|DegT/DnrJ/EryC1/StrS-aminotransferase-family-protein
MLNTFLSPWPCFTQEEADAVSKVLLSNKVNYWTGSECREFEKEFAAFSGTRYAVALSNGTLALDVALKAIGIGVGDDVIVTSRTFLASASCIVNAGANPVFADVDLNSQNISAETVKAVLTPNTKAVIVVHLTGMPAEMDGIMALAKEHNLWVIEDCAQAHGAKYKGKSVGSIGHVGAWSFCQDKIMTTGGEGGMVTTNDKTLWEKMWSYKDHGKSYDAVYHREHAPGFRWLHESFGTNWRMMEMQAAIGRIQLKRLPEWTACRQAHAAKLAESLGKFKSIRLVEVADYIGHAQYKFYAFVKPEHLKDGWTRDRIVNELNARKVPCYQGSCSEVYLEKSFDNTPWRPKERLKNAVELGDTSLMFLVHPTLTDGEIAFCKEHIEAVLTEATR
>NZ_NVYQ01000093.1|WP_025460255.1|12923_14834_-|NADH-dependent-dehydratase-PglD
MTLETLLALPRNIKKICFLIHDFLMIFIAFWFTQSLKADYSNEWFDPTNWQSFLLTAPLTIGLFVRMGLYRAVTRFISFRILSTALAGSLASAVLFFLNTLIFEERLRLALPIVYFLLLFVSVTGSRMVLRGLLSEHPKKQMIPVIIYGAGQAGRQLLEAVKQMREYSAAAFVDDDPKLWHTVIYDLAVYQPDAIAFLIERYGVEKILLAIPGATQEQRRRIINKLEAYPCEVLTIPGMKDLMDGKISIGTLKKISVSDLLGRDSVAPDNRLMSADIEGKTVMVTGAGGSIGSELCRQIIRRRPEKLLLFELSEFALYAVEKELRETCIQKRLDTEILPFLGSVQNRTLLEHVMTAFSVATVYHAAAYKHVPMVEFNTVEGIRNNIFGTLECALAATTSGVETFVLISTDKAVRPTNTMGASKRMAELCLQALAAEPGQKTRFSMVRFGNVLGSSGSVVPLFEKQIAEGGPLTLTHPEITRYFMTIPEAAQLVIQAGAMGTGGDVFVLDMGESVKIIDLARQMITLSGLKPNTPEQPDGDIEILITGLRPGEKLYEELLIGDNVRKTGHPRIMTANETMLPWHELSALLDRIRAACDRYDQQAIRTLLINAPTGFAPSDGICDLLWVRETHRKNAV
>NZ_NVYQ01000093.1|WP_025460254.1|11575_12868_-|valine--pyruvate-transaminase
MQFSAFGEKFTQHSGILQLMDDLGDALKSDKPVNMLGGGNPARIAEVNAVFADVFSKLAAEHAVENIGNYSNPQGDAALIDALTAFLNREYGWNLTADNIALTNGSQNAFFYLFNLFGGKFKLSDGTSAEKAILLPLAPEYIGYADVHIEGQHFVSVKPKIENVEHEGEAGFFKYRVDFDALENLPELKAGKIGAICCSRPTNPTGNVLTDGEMARLDALAREHGIPLIIDNAYGMPFPNIIYSDVTLNWHENIILCFSLSKVGLPGVRTGIIVAAPEVVKAVSSLNAIVNLAPTRFGAAIAVPLLESGEMKRLADQVIRPFYHNQAQTAVSLLKRELGAYPMKIHKPEGAIFLWLWFENLPVSSQTLYEMLKAEGTLIIPGEHFFVGIDTQDYPHAGECIRMSIAQDAQTLEKGIAAIGKTVRKLYDNV

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_NVYQ01000093_1	1.7\|462\|30\|NZ_NVYQ01000093\|PILER-CR,CRISPRCasFinder,CRT	462-491	30	NZ_NVYQ01000032.1	17299-17328	0	1.0
NZ_NVYQ01000093_1	1.8\|528\|30\|NZ_NVYQ01000093\|PILER-CR,CRISPRCasFinder,CRT	528-557	30	NZ_NVYQ01000042.1	988-1017	0	1.0
NZ_NVYQ01000093_2	2.3\|25345\|50\|NZ_NVYQ01000093\|CRISPRCasFinder	25345-25394	50	NZ_NVYQ01000214.1	2121-2170	1	0.98
NZ_NVYQ01000093_2	2.3\|25345\|50\|NZ_NVYQ01000093\|CRISPRCasFinder	25345-25394	50	NZ_NVYQ01000246.1	234-283	0	1.0
NZ_NVYQ01000093_2	2.3\|25345\|50\|NZ_NVYQ01000093\|CRISPRCasFinder	25345-25394	50	NZ_NVYQ01000254.1	8-57	0	1.0

1. spacer 1.7|462|30|NZ_NVYQ01000093|PILER-CR,CRISPRCasFinder,CRT matches to position: 17299-17328, mismatch: 0, identity: 1.0

tgaatcgatatcgagcctgccggcgggggc	CRISPR spacer
tgaatcgatatcgagcctgccggcgggggc	Protospacer
******************************

2. spacer 1.8|528|30|NZ_NVYQ01000093|PILER-CR,CRISPRCasFinder,CRT matches to position: 988-1017, mismatch: 0, identity: 1.0

aaaccgagttcaaccgccacgtcgaagaca	CRISPR spacer
aaaccgagttcaaccgccacgtcgaagaca	Protospacer
******************************

3. spacer 2.3|25345|50|NZ_NVYQ01000093|CRISPRCasFinder matches to position: 2121-2170, mismatch: 1, identity: 0.98

tggaatttcaatgcctcaagaatttatcggaaaaaaccaaaacccttccg	CRISPR spacer
tggaatttcaatacctcaagaatttatcggaaaaaaccaaaacccttccg	Protospacer
************.*************************************

4. spacer 2.3|25345|50|NZ_NVYQ01000093|CRISPRCasFinder matches to position: 234-283, mismatch: 0, identity: 1.0

tggaatttcaatgcctcaagaatttatcggaaaaaaccaaaacccttccg	CRISPR spacer
tggaatttcaatgcctcaagaatttatcggaaaaaaccaaaacccttccg	Protospacer
**************************************************

5. spacer 2.3|25345|50|NZ_NVYQ01000093|CRISPRCasFinder matches to position: 8-57, mismatch: 0, identity: 1.0

tggaatttcaatgcctcaagaatttatcggaaaaaaccaaaacccttccg	CRISPR spacer
tggaatttcaatgcctcaagaatttatcggaaaaaaccaaaacccttccg	Protospacer
**************************************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_NVYQ01000093_1	1.1\|66\|30\|NZ_NVYQ01000093\|PILER-CR,CRISPRCasFinder,CRT	66-95	30	NZ_CP022992	Paraburkholderia aromaticivorans strain BN5 plasmid pBN2, complete sequence	409560-409589	6	0.8
NZ_NVYQ01000093_1	1.5\|330\|30\|NZ_NVYQ01000093\|PILER-CR,CRISPRCasFinder,CRT	330-359	30	AP013461	Uncultured Mediterranean phage uvMED DNA, complete genome, group G18, isolate: uvMED-CGR-C29A-MedDCM-OCT-S24-C21	26858-26887	6	0.8
NZ_NVYQ01000093_1	1.5\|330\|30\|NZ_NVYQ01000093\|PILER-CR,CRISPRCasFinder,CRT	330-359	30	AP013749	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C29A-MedDCM-OCT-S45-C34, * SEQUENCING IN PROGRESS *	18574-18603	6	0.8
NZ_NVYQ01000093_1	1.5\|330\|30\|NZ_NVYQ01000093\|PILER-CR,CRISPRCasFinder,CRT	330-359	30	AP013462	Uncultured Mediterranean phage uvMED DNA, complete genome, group G18, isolate: uvMED-CGR-C29A-MedDCM-OCT-S33-C24	35796-35825	6	0.8
NZ_NVYQ01000093_1	1.5\|330\|30\|NZ_NVYQ01000093\|PILER-CR,CRISPRCasFinder,CRT	330-359	30	AP013743	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C29A-MedDCM-OCT-S34-C32, * SEQUENCING IN PROGRESS *	21220-21249	6	0.8
NZ_NVYQ01000093_1	1.5\|330\|30\|NZ_NVYQ01000093\|PILER-CR,CRISPRCasFinder,CRT	330-359	30	AP014436	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C29A-MedDCM-OCT-S31-C13, * SEQUENCING IN PROGRESS *, 5 ordered pieces	16839-16868	6	0.8
NZ_NVYQ01000093_1	1.5\|330\|30\|NZ_NVYQ01000093\|PILER-CR,CRISPRCasFinder,CRT	330-359	30	AP013742	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C29A-MedDCM-OCT-S30-C25, * SEQUENCING IN PROGRESS *	18964-18993	6	0.8
NZ_NVYQ01000093_1	1.5\|330\|30\|NZ_NVYQ01000093\|PILER-CR,CRISPRCasFinder,CRT	330-359	30	AP013463	Uncultured Mediterranean phage uvMED DNA, complete genome, group G18, isolate: uvMED-CGR-C29A-MedDCM-OCT-S42-C45	3343-3372	6	0.8
NZ_NVYQ01000093_1	1.5\|330\|30\|NZ_NVYQ01000093\|PILER-CR,CRISPRCasFinder,CRT	330-359	30	AP013747	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C29A-MedDCM-OCT-S43-C36, * SEQUENCING IN PROGRESS *	18562-18591	6	0.8
NZ_NVYQ01000093_1	1.5\|330\|30\|NZ_NVYQ01000093\|PILER-CR,CRISPRCasFinder,CRT	330-359	30	AP013746	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C29A-MedDCM-OCT-S40-C25, * SEQUENCING IN PROGRESS *	22138-22167	6	0.8
NZ_NVYQ01000093_1	1.5\|330\|30\|NZ_NVYQ01000093\|PILER-CR,CRISPRCasFinder,CRT	330-359	30	AP013745	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C29A-MedDCM-OCT-S39-C31, * SEQUENCING IN PROGRESS *	18838-18867	6	0.8
NZ_NVYQ01000093_1	1.5\|330\|30\|NZ_NVYQ01000093\|PILER-CR,CRISPRCasFinder,CRT	330-359	30	AP013748	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C29A-MedDCM-OCT-S44-C33, * SEQUENCING IN PROGRESS *	17245-17274	6	0.8
NZ_NVYQ01000093_1	1.7\|462\|30\|NZ_NVYQ01000093\|PILER-CR,CRISPRCasFinder,CRT	462-491	30	NZ_CP043499	Rhizobium grahamii strain BG7 plasmid unnamed, complete sequence	674133-674162	6	0.8
NZ_NVYQ01000093_1	1.8\|528\|30\|NZ_NVYQ01000093\|PILER-CR,CRISPRCasFinder,CRT	528-557	30	NZ_CP021355	Rhodococcus sp. S2-17 plasmid pRB98, complete sequence	551584-551613	6	0.8
NZ_NVYQ01000093_1	1.2\|132\|30\|NZ_NVYQ01000093\|PILER-CR,CRISPRCasFinder,CRT	132-161	30	NZ_CP022523	Pseudoalteromonas sp. NC201 plasmid pNC201, complete sequence	1228533-1228562	7	0.767
NZ_NVYQ01000093_1	1.7\|462\|30\|NZ_NVYQ01000093\|PILER-CR,CRISPRCasFinder,CRT	462-491	30	NZ_CP015739	Shinella sp. HZN7 plasmid pShin-03, complete sequence	211977-212006	7	0.767
NZ_NVYQ01000093_1	1.7\|462\|30\|NZ_NVYQ01000093\|PILER-CR,CRISPRCasFinder,CRT	462-491	30	NZ_CP012944	Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence	1001751-1001780	7	0.767
NZ_NVYQ01000093_1	1.8\|528\|30\|NZ_NVYQ01000093\|PILER-CR,CRISPRCasFinder,CRT	528-557	30	NZ_CP009145	Sinorhizobium meliloti strain RMO17 plasmid pSymA, complete sequence	556502-556531	7	0.767
NZ_NVYQ01000093_1	1.8\|528\|30\|NZ_NVYQ01000093\|PILER-CR,CRISPRCasFinder,CRT	528-557	30	NZ_CP021827	Sinorhizobium meliloti strain KH35c plasmid psymA, complete sequence	1110670-1110699	7	0.767
NZ_NVYQ01000093_1	1.8\|528\|30\|NZ_NVYQ01000093\|PILER-CR,CRISPRCasFinder,CRT	528-557	30	NZ_CP021830	Sinorhizobium meliloti strain HM006 plasmid psymA, complete sequence	1477709-1477738	7	0.767
NZ_NVYQ01000093_1	1.8\|528\|30\|NZ_NVYQ01000093\|PILER-CR,CRISPRCasFinder,CRT	528-557	30	NZ_CP021824	Sinorhizobium meliloti strain KH46 plasmid psymA, complete sequence	434475-434504	7	0.767
NZ_NVYQ01000093_1	1.8\|528\|30\|NZ_NVYQ01000093\|PILER-CR,CRISPRCasFinder,CRT	528-557	30	NZ_CP021805	Sinorhizobium meliloti strain T073 plasmid psymA, complete sequence	1349246-1349275	7	0.767
NZ_NVYQ01000093_1	1.2\|132\|30\|NZ_NVYQ01000093\|PILER-CR,CRISPRCasFinder,CRT	132-161	30	NZ_CP053709	Acetobacteraceae bacterium strain PAMC 26569 plasmid unnamed1, complete sequence	341870-341899	8	0.733
NZ_NVYQ01000093_1	1.5\|330\|30\|NZ_NVYQ01000093\|PILER-CR,CRISPRCasFinder,CRT	330-359	30	NZ_CP053818	Vibrio cholerae strain SA7G plasmid pSA7G1, complete sequence	26216-26245	8	0.733
NZ_NVYQ01000093_1	1.7\|462\|30\|NZ_NVYQ01000093\|PILER-CR,CRISPRCasFinder,CRT	462-491	30	NZ_CP024310	Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3c, complete sequence	605159-605188	8	0.733
NZ_NVYQ01000093_1	1.7\|462\|30\|NZ_NVYQ01000093\|PILER-CR,CRISPRCasFinder,CRT	462-491	30	NZ_CP023064	Sinorhizobium sp. CCBAU 05631 plasmid pSS05631b, complete sequence	425712-425741	8	0.733
NZ_NVYQ01000093_1	1.7\|462\|30\|NZ_NVYQ01000093\|PILER-CR,CRISPRCasFinder,CRT	462-491	30	NZ_CP009294	Novosphingobium pentaromativorans US6-1 plasmid pLA1, complete sequence	32083-32112	8	0.733
NZ_NVYQ01000093_1	1.7\|462\|30\|NZ_NVYQ01000093\|PILER-CR,CRISPRCasFinder,CRT	462-491	30	NZ_CP011771	Croceicoccus naphthovorans strain PQ-2 plasmid p1, complete sequence	110603-110632	8	0.733
NZ_NVYQ01000093_1	1.8\|528\|30\|NZ_NVYQ01000093\|PILER-CR,CRISPRCasFinder,CRT	528-557	30	NC_019848	Sinorhizobium meliloti GR4 plasmid pRmeGR4c, complete sequence	381316-381345	8	0.733
NZ_NVYQ01000093_1	1.8\|528\|30\|NZ_NVYQ01000093\|PILER-CR,CRISPRCasFinder,CRT	528-557	30	NC_003037	Sinorhizobium meliloti 1021 plasmid pSymA, complete sequence	1048697-1048726	8	0.733
NZ_NVYQ01000093_1	1.8\|528\|30\|NZ_NVYQ01000093\|PILER-CR,CRISPRCasFinder,CRT	528-557	30	NZ_CP019585	Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymA, complete sequence	1071135-1071164	8	0.733
NZ_NVYQ01000093_1	1.8\|528\|30\|NZ_NVYQ01000093\|PILER-CR,CRISPRCasFinder,CRT	528-557	30	NC_017327	Sinorhizobium meliloti SM11 plasmid pSmeSM11c, complete sequence	537429-537458	8	0.733
NZ_NVYQ01000093_1	1.8\|528\|30\|NZ_NVYQ01000093\|PILER-CR,CRISPRCasFinder,CRT	528-557	30	NZ_CP021798	Sinorhizobium meliloti strain USDA1106 plasmid psymA, complete sequence	1033988-1034017	8	0.733
NZ_NVYQ01000093_1	1.8\|528\|30\|NZ_NVYQ01000093\|PILER-CR,CRISPRCasFinder,CRT	528-557	30	NC_017324	Sinorhizobium meliloti BL225C plasmid pSINMEB01, complete sequence	11163-11192	8	0.733
NZ_NVYQ01000093_1	1.8\|528\|30\|NZ_NVYQ01000093\|PILER-CR,CRISPRCasFinder,CRT	528-557	30	NZ_CP021801	Sinorhizobium meliloti strain USDA1021 plasmid psymA, complete sequence	478552-478581	8	0.733
NZ_NVYQ01000093_1	1.8\|528\|30\|NZ_NVYQ01000093\|PILER-CR,CRISPRCasFinder,CRT	528-557	30	NZ_CP021819	Sinorhizobium meliloti strain M162 plasmid psymA, complete sequence	333614-333643	8	0.733
NZ_NVYQ01000093_1	1.8\|528\|30\|NZ_NVYQ01000093\|PILER-CR,CRISPRCasFinder,CRT	528-557	30	NZ_CP021813	Sinorhizobium meliloti strain M270 plasmid psymA, complete sequence	38633-38662	8	0.733
NZ_NVYQ01000093_1	1.8\|528\|30\|NZ_NVYQ01000093\|PILER-CR,CRISPRCasFinder,CRT	528-557	30	NC_018683	Sinorhizobium meliloti Rm41 plasmid pSYMA, complete sequence	1251017-1251046	8	0.733
NZ_NVYQ01000093_1	1.8\|528\|30\|NZ_NVYQ01000093\|PILER-CR,CRISPRCasFinder,CRT	528-557	30	NZ_CP021794	Sinorhizobium meliloti strain USDA1157 plasmid psymA, complete sequence	968770-968799	8	0.733
NZ_NVYQ01000093_1	1.8\|528\|30\|NZ_NVYQ01000093\|PILER-CR,CRISPRCasFinder,CRT	528-557	30	NZ_CP021809	Sinorhizobium meliloti strain Rm41 plasmid psymA, complete sequence	936161-936190	8	0.733
NZ_NVYQ01000093_1	1.8\|528\|30\|NZ_NVYQ01000093\|PILER-CR,CRISPRCasFinder,CRT	528-557	30	NZ_CP021217	Sinorhizobium meliloti RU11/001 plasmid pSymA, complete sequence	122346-122375	8	0.733
NZ_NVYQ01000093_1	1.8\|528\|30\|NZ_NVYQ01000093\|PILER-CR,CRISPRCasFinder,CRT	528-557	30	NZ_CP026526	Sinorhizobium meliloti strain AK21 plasmid pSymA, complete sequence	1336744-1336773	8	0.733
NZ_NVYQ01000093_1	1.8\|528\|30\|NZ_NVYQ01000093\|PILER-CR,CRISPRCasFinder,CRT	528-557	30	NZ_CP054032	Rhizobium sp. JKLM13E plasmid pPR13E01, complete sequence	582171-582200	8	0.733
NZ_NVYQ01000093_1	1.8\|528\|30\|NZ_NVYQ01000093\|PILER-CR,CRISPRCasFinder,CRT	528-557	30	NZ_CP019483	Sinorhizobium meliloti strain B401 plasmid pSymA, complete sequence	903141-903170	8	0.733
NZ_NVYQ01000093_1	1.8\|528\|30\|NZ_NVYQ01000093\|PILER-CR,CRISPRCasFinder,CRT	528-557	30	NZ_CP019486	Sinorhizobium meliloti strain B399 plasmid pSymA, complete sequence	865890-865919	8	0.733
NZ_NVYQ01000093_1	1.8\|528\|30\|NZ_NVYQ01000093\|PILER-CR,CRISPRCasFinder,CRT	528-557	30	NC_020527	Sinorhizobium meliloti 2011 plasmid pSymA, complete sequence	1047036-1047065	8	0.733
NZ_NVYQ01000093_1	1.4\|264\|30\|NZ_NVYQ01000093\|PILER-CR,CRISPRCasFinder,CRT	264-293	30	MG592606	Vibrio phage 1.240.O._10N.261.52.F8, partial genome	9805-9834	9	0.7
NZ_NVYQ01000093_1	1.4\|264\|30\|NZ_NVYQ01000093\|PILER-CR,CRISPRCasFinder,CRT	264-293	30	MG592557	Vibrio phage 1.189.B._10N.286.51.B5, partial genome	9330-9359	9	0.7
NZ_NVYQ01000093_1	1.4\|264\|30\|NZ_NVYQ01000093\|PILER-CR,CRISPRCasFinder,CRT	264-293	30	MG592559	Vibrio phage 1.189.O._10N.286.51.B5, partial genome	9329-9358	9	0.7
NZ_NVYQ01000093_1	1.4\|264\|30\|NZ_NVYQ01000093\|PILER-CR,CRISPRCasFinder,CRT	264-293	30	MG592543	Vibrio phage 1.176.O._10N.261.55.F5, partial genome	9516-9545	9	0.7
NZ_NVYQ01000093_1	1.4\|264\|30\|NZ_NVYQ01000093\|PILER-CR,CRISPRCasFinder,CRT	264-293	30	MG592490	Vibrio phage 1.116.O._10N.222.52.C10, partial genome	9333-9362	9	0.7
NZ_NVYQ01000093_1	1.4\|264\|30\|NZ_NVYQ01000093\|PILER-CR,CRISPRCasFinder,CRT	264-293	30	MG592558	Vibrio phage 1.189.C._10N.286.51.B5, partial genome	9330-9359	9	0.7
NZ_NVYQ01000093_1	1.4\|264\|30\|NZ_NVYQ01000093\|PILER-CR,CRISPRCasFinder,CRT	264-293	30	MG592539	Vibrio phage 1.172.O._10N.261.52.F5, partial genome	9334-9363	9	0.7
NZ_NVYQ01000093_1	1.5\|330\|30\|NZ_NVYQ01000093\|PILER-CR,CRISPRCasFinder,CRT	330-359	30	NZ_CP013935	Weissella cibaria strain CMS3 plasmid unnamed, complete sequence	17677-17706	9	0.7
NZ_NVYQ01000093_1	1.5\|330\|30\|NZ_NVYQ01000093\|PILER-CR,CRISPRCasFinder,CRT	330-359	30	NZ_CP013937	Weissella cibaria strain CMU plasmid unnamed1, complete sequence	15787-15816	9	0.7

1. spacer 1.1|66|30|NZ_NVYQ01000093|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022992 (Paraburkholderia aromaticivorans strain BN5 plasmid pBN2, complete sequence) position: , mismatch: 6, identity: 0.8

tgcggaa-agcctccatgctttgcagcactg	CRISPR spacer
-gcgggacagcctccatgctttgcaggtcga	Protospacer
 ****.* ******************  * .

2. spacer 1.5|330|30|NZ_NVYQ01000093|PILER-CR,CRISPRCasFinder,CRT matches to AP013461 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G18, isolate: uvMED-CGR-C29A-MedDCM-OCT-S24-C21) position: , mismatch: 6, identity: 0.8

tttttcgattttttatattgagcgtttttg	CRISPR spacer
atggttgatttattatatttagcgtttttg	Protospacer
 *  *.***** ******* **********

3. spacer 1.5|330|30|NZ_NVYQ01000093|PILER-CR,CRISPRCasFinder,CRT matches to AP013749 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C29A-MedDCM-OCT-S45-C34, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 6, identity: 0.8

tttttcgattttttatattgagcgtttttg	CRISPR spacer
atggttgatttattatatttagcgtttttg	Protospacer
 *  *.***** ******* **********

4. spacer 1.5|330|30|NZ_NVYQ01000093|PILER-CR,CRISPRCasFinder,CRT matches to AP013462 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G18, isolate: uvMED-CGR-C29A-MedDCM-OCT-S33-C24) position: , mismatch: 6, identity: 0.8

tttttcgattttttatattgagcgtttttg	CRISPR spacer
atggttgatttattatatttagcgtttttg	Protospacer
 *  *.***** ******* **********

5. spacer 1.5|330|30|NZ_NVYQ01000093|PILER-CR,CRISPRCasFinder,CRT matches to AP013743 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C29A-MedDCM-OCT-S34-C32, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 6, identity: 0.8

tttttcgattttttatattgagcgtttttg	CRISPR spacer
atggttgatttattatatttagcgtttttg	Protospacer
 *  *.***** ******* **********

6. spacer 1.5|330|30|NZ_NVYQ01000093|PILER-CR,CRISPRCasFinder,CRT matches to AP014436 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C29A-MedDCM-OCT-S31-C13, *** SEQUENCING IN PROGRESS ***, 5 ordered pieces) position: , mismatch: 6, identity: 0.8

tttttcgattttttatattgagcgtttttg	CRISPR spacer
atggttgatttattatatttagcgtttttg	Protospacer
 *  *.***** ******* **********

7. spacer 1.5|330|30|NZ_NVYQ01000093|PILER-CR,CRISPRCasFinder,CRT matches to AP013742 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C29A-MedDCM-OCT-S30-C25, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 6, identity: 0.8

tttttcgattttttatattgagcgtttttg	CRISPR spacer
atggttgatttattatatttagcgtttttg	Protospacer
 *  *.***** ******* **********

8. spacer 1.5|330|30|NZ_NVYQ01000093|PILER-CR,CRISPRCasFinder,CRT matches to AP013463 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G18, isolate: uvMED-CGR-C29A-MedDCM-OCT-S42-C45) position: , mismatch: 6, identity: 0.8

tttttcgattttttatattgagcgtttttg	CRISPR spacer
atggttgatttattatatttagcgtttttg	Protospacer
 *  *.***** ******* **********

9. spacer 1.5|330|30|NZ_NVYQ01000093|PILER-CR,CRISPRCasFinder,CRT matches to AP013747 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C29A-MedDCM-OCT-S43-C36, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 6, identity: 0.8

tttttcgattttttatattgagcgtttttg	CRISPR spacer
atggttgatttattatatttagcgtttttg	Protospacer
 *  *.***** ******* **********

10. spacer 1.5|330|30|NZ_NVYQ01000093|PILER-CR,CRISPRCasFinder,CRT matches to AP013746 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C29A-MedDCM-OCT-S40-C25, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 6, identity: 0.8

tttttcgattttttatattgagcgtttttg	CRISPR spacer
atggttgatttattatatttagcgtttttg	Protospacer
 *  *.***** ******* **********

11. spacer 1.5|330|30|NZ_NVYQ01000093|PILER-CR,CRISPRCasFinder,CRT matches to AP013745 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C29A-MedDCM-OCT-S39-C31, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 6, identity: 0.8

tttttcgattttttatattgagcgtttttg	CRISPR spacer
atggttgatttattatatttagcgtttttg	Protospacer
 *  *.***** ******* **********

12. spacer 1.5|330|30|NZ_NVYQ01000093|PILER-CR,CRISPRCasFinder,CRT matches to AP013748 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C29A-MedDCM-OCT-S44-C33, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 6, identity: 0.8

tttttcgattttttatattgagcgtttttg	CRISPR spacer
atggttgatttattatatttagcgtttttg	Protospacer
 *  *.***** ******* **********

13. spacer 1.7|462|30|NZ_NVYQ01000093|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP043499 (Rhizobium grahamii strain BG7 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.8

tgaatcgatatcgagcctgccggcgggggc	CRISPR spacer
tgaatcgatatcgagcctgacgccgaaacc	Protospacer
******************* ** **... *

14. spacer 1.8|528|30|NZ_NVYQ01000093|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021355 (Rhodococcus sp. S2-17 plasmid pRB98, complete sequence) position: , mismatch: 6, identity: 0.8

aaaccgagttcaaccgccacgtcgaagaca	CRISPR spacer
cagcggtgttcatccgccacgtcgacgaca	Protospacer
 *.* * ***** ************ ****

15. spacer 1.2|132|30|NZ_NVYQ01000093|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022523 (Pseudoalteromonas sp. NC201 plasmid pNC201, complete sequence) position: , mismatch: 7, identity: 0.767

aatttgcgccttgctgcattgtgtagtttg	CRISPR spacer
aatttacgccttgctgaattgtgatatcta	Protospacer
*****.********** ******  .*.*.

16. spacer 1.7|462|30|NZ_NVYQ01000093|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015739 (Shinella sp. HZN7 plasmid pShin-03, complete sequence) position: , mismatch: 7, identity: 0.767

tgaatcgatatcgagcctgccggcgggggc	CRISPR spacer
gaaatcgatatcgagcgtgccggcggccag	Protospacer
 .************** *********  .

17. spacer 1.7|462|30|NZ_NVYQ01000093|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012944 (Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.767

tgaatcgatatcgagcctgccggcgggggc	CRISPR spacer
gagatcgatatcgattctgccggcggggtt	Protospacer
 ..*********** .************ .

18. spacer 1.8|528|30|NZ_NVYQ01000093|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009145 (Sinorhizobium meliloti strain RMO17 plasmid pSymA, complete sequence) position: , mismatch: 7, identity: 0.767

aaaccgagttcaaccgccacgtcgaagaca	CRISPR spacer
tcgacaagatcaaccgccacgtcgaagacg	Protospacer
  . *.** ********************.

19. spacer 1.8|528|30|NZ_NVYQ01000093|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021827 (Sinorhizobium meliloti strain KH35c plasmid psymA, complete sequence) position: , mismatch: 7, identity: 0.767

aaaccgagttcaaccgccacgtcgaagaca	CRISPR spacer
tcgacaagatcaaccgccacgtcgaagacg	Protospacer
  . *.** ********************.

20. spacer 1.8|528|30|NZ_NVYQ01000093|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021830 (Sinorhizobium meliloti strain HM006 plasmid psymA, complete sequence) position: , mismatch: 7, identity: 0.767

aaaccgagttcaaccgccacgtcgaagaca	CRISPR spacer
tcgacaagatcaaccgccacgtcgaagacg	Protospacer
  . *.** ********************.

21. spacer 1.8|528|30|NZ_NVYQ01000093|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021824 (Sinorhizobium meliloti strain KH46 plasmid psymA, complete sequence) position: , mismatch: 7, identity: 0.767

aaaccgagttcaaccgccacgtcgaagaca	CRISPR spacer
tcgacaagatcaaccgccacgtcgaagacg	Protospacer
  . *.** ********************.

22. spacer 1.8|528|30|NZ_NVYQ01000093|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021805 (Sinorhizobium meliloti strain T073 plasmid psymA, complete sequence) position: , mismatch: 7, identity: 0.767

aaaccgagttcaaccgccacgtcgaagaca	CRISPR spacer
tcgacaagatcaaccgccacgtcgaagacg	Protospacer
  . *.** ********************.

23. spacer 1.2|132|30|NZ_NVYQ01000093|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053709 (Acetobacteraceae bacterium strain PAMC 26569 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733

aatttgcgccttgctgcattgtgtagtttg	CRISPR spacer
catttgcgccttgctgcttggtgtggaaca	Protospacer
 **************** * ****.*  ..

24. spacer 1.5|330|30|NZ_NVYQ01000093|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053818 (Vibrio cholerae strain SA7G plasmid pSA7G1, complete sequence) position: , mismatch: 8, identity: 0.733

tttttcgattttttatattgagcgtttttg	CRISPR spacer
aaagtagattttttaaatttagcgtttttc	Protospacer
    * ********* *** *********

25. spacer 1.7|462|30|NZ_NVYQ01000093|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024310 (Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3c, complete sequence) position: , mismatch: 8, identity: 0.733

tgaatcgatatcgagcctgccggcgggggc	CRISPR spacer
gaccatgatatcgagcgtgccggcggcggc	Protospacer
 .   .********** ********* ***

26. spacer 1.7|462|30|NZ_NVYQ01000093|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023064 (Sinorhizobium sp. CCBAU 05631 plasmid pSS05631b, complete sequence) position: , mismatch: 8, identity: 0.733

tgaatcgatatcgagcctgccggcgggggc	CRISPR spacer
gaccatgatatcgagcgtgccggcggcggc	Protospacer
 .   .********** ********* ***

27. spacer 1.7|462|30|NZ_NVYQ01000093|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009294 (Novosphingobium pentaromativorans US6-1 plasmid pLA1, complete sequence) position: , mismatch: 8, identity: 0.733

tgaatcgatatcgagcctgccggcgggggc	CRISPR spacer
ttctatgatctcgagcctgccggcgggagt	Protospacer
*    .*** *****************.*.

28. spacer 1.7|462|30|NZ_NVYQ01000093|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011771 (Croceicoccus naphthovorans strain PQ-2 plasmid p1, complete sequence) position: , mismatch: 8, identity: 0.733

tgaatcgatatcgagcctgccggcgggggc	CRISPR spacer
ttctatgatctcgagcctgccggcgggagt	Protospacer
*    .*** *****************.*.

29. spacer 1.8|528|30|NZ_NVYQ01000093|PILER-CR,CRISPRCasFinder,CRT matches to NC_019848 (Sinorhizobium meliloti GR4 plasmid pRmeGR4c, complete sequence) position: , mismatch: 8, identity: 0.733

aaaccgagttcaaccgccacgtcgaagaca	CRISPR spacer
tcgacaagatcgaccgccacgtcgaagacg	Protospacer
  . *.** **.*****************.

30. spacer 1.8|528|30|NZ_NVYQ01000093|PILER-CR,CRISPRCasFinder,CRT matches to NC_003037 (Sinorhizobium meliloti 1021 plasmid pSymA, complete sequence) position: , mismatch: 8, identity: 0.733

aaaccgagttcaaccgccacgtcgaagaca	CRISPR spacer
tcgacaagatcgaccgccacgtcgaagacg	Protospacer
  . *.** **.*****************.

31. spacer 1.8|528|30|NZ_NVYQ01000093|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019585 (Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymA, complete sequence) position: , mismatch: 8, identity: 0.733

aaaccgagttcaaccgccacgtcgaagaca	CRISPR spacer
tcgacaagatcgaccgccacgtcgaagacg	Protospacer
  . *.** **.*****************.

32. spacer 1.8|528|30|NZ_NVYQ01000093|PILER-CR,CRISPRCasFinder,CRT matches to NC_017327 (Sinorhizobium meliloti SM11 plasmid pSmeSM11c, complete sequence) position: , mismatch: 8, identity: 0.733

aaaccgagttcaaccgccacgtcgaagaca	CRISPR spacer
tcgacaagatcgaccgccacgtcgaagacg	Protospacer
  . *.** **.*****************.

33. spacer 1.8|528|30|NZ_NVYQ01000093|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021798 (Sinorhizobium meliloti strain USDA1106 plasmid psymA, complete sequence) position: , mismatch: 8, identity: 0.733

aaaccgagttcaaccgccacgtcgaagaca	CRISPR spacer
tcgacaagatcgaccgccacgtcgaagacg	Protospacer
  . *.** **.*****************.

34. spacer 1.8|528|30|NZ_NVYQ01000093|PILER-CR,CRISPRCasFinder,CRT matches to NC_017324 (Sinorhizobium meliloti BL225C plasmid pSINMEB01, complete sequence) position: , mismatch: 8, identity: 0.733

aaaccgagttcaaccgccacgtcgaagaca	CRISPR spacer
tcgacaagatcgaccgccacgtcgaagacg	Protospacer
  . *.** **.*****************.

35. spacer 1.8|528|30|NZ_NVYQ01000093|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021801 (Sinorhizobium meliloti strain USDA1021 plasmid psymA, complete sequence) position: , mismatch: 8, identity: 0.733

aaaccgagttcaaccgccacgtcgaagaca	CRISPR spacer
tcgacaagatcgaccgccacgtcgaagacg	Protospacer
  . *.** **.*****************.

36. spacer 1.8|528|30|NZ_NVYQ01000093|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021819 (Sinorhizobium meliloti strain M162 plasmid psymA, complete sequence) position: , mismatch: 8, identity: 0.733

aaaccgagttcaaccgccacgtcgaagaca	CRISPR spacer
tcgacaagatcgaccgccacgtcgaagacg	Protospacer
  . *.** **.*****************.

37. spacer 1.8|528|30|NZ_NVYQ01000093|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021813 (Sinorhizobium meliloti strain M270 plasmid psymA, complete sequence) position: , mismatch: 8, identity: 0.733

aaaccgagttcaaccgccacgtcgaagaca	CRISPR spacer
tcgacaagatcgaccgccacgtcgaagacg	Protospacer
  . *.** **.*****************.

38. spacer 1.8|528|30|NZ_NVYQ01000093|PILER-CR,CRISPRCasFinder,CRT matches to NC_018683 (Sinorhizobium meliloti Rm41 plasmid pSYMA, complete sequence) position: , mismatch: 8, identity: 0.733

aaaccgagttcaaccgccacgtcgaagaca	CRISPR spacer
tcgacaagatcgaccgccacgtcgaagacg	Protospacer
  . *.** **.*****************.

39. spacer 1.8|528|30|NZ_NVYQ01000093|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021794 (Sinorhizobium meliloti strain USDA1157 plasmid psymA, complete sequence) position: , mismatch: 8, identity: 0.733

aaaccgagttcaaccgccacgtcgaagaca	CRISPR spacer
tcgacaagatcgaccgccacgtcgaagacg	Protospacer
  . *.** **.*****************.

40. spacer 1.8|528|30|NZ_NVYQ01000093|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021809 (Sinorhizobium meliloti strain Rm41 plasmid psymA, complete sequence) position: , mismatch: 8, identity: 0.733

aaaccgagttcaaccgccacgtcgaagaca	CRISPR spacer
tcgacaagatcgaccgccacgtcgaagacg	Protospacer
  . *.** **.*****************.

41. spacer 1.8|528|30|NZ_NVYQ01000093|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021217 (Sinorhizobium meliloti RU11/001 plasmid pSymA, complete sequence) position: , mismatch: 8, identity: 0.733

aaaccgagttcaaccgccacgtcgaagaca	CRISPR spacer
tcgacaagatcgaccgccacgtcgaagacg	Protospacer
  . *.** **.*****************.

42. spacer 1.8|528|30|NZ_NVYQ01000093|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026526 (Sinorhizobium meliloti strain AK21 plasmid pSymA, complete sequence) position: , mismatch: 8, identity: 0.733

aaaccgagttcaaccgccacgtcgaagaca	CRISPR spacer
tcgacaagatcgaccgccacgtcgaagacg	Protospacer
  . *.** **.*****************.

43. spacer 1.8|528|30|NZ_NVYQ01000093|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054032 (Rhizobium sp. JKLM13E plasmid pPR13E01, complete sequence) position: , mismatch: 8, identity: 0.733

aaaccgagttcaaccgccacgtcgaagaca	CRISPR spacer
tgaccgcgttcaacggccacgtcgatctcg	Protospacer
 .**** ******* **********   *.

44. spacer 1.8|528|30|NZ_NVYQ01000093|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019483 (Sinorhizobium meliloti strain B401 plasmid pSymA, complete sequence) position: , mismatch: 8, identity: 0.733

aaaccgagttcaaccgccacgtcgaagaca	CRISPR spacer
tcgacaagatcgaccgccacgtcgaagacg	Protospacer
  . *.** **.*****************.

45. spacer 1.8|528|30|NZ_NVYQ01000093|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019486 (Sinorhizobium meliloti strain B399 plasmid pSymA, complete sequence) position: , mismatch: 8, identity: 0.733

aaaccgagttcaaccgccacgtcgaagaca	CRISPR spacer
tcgacaagatcgaccgccacgtcgaagacg	Protospacer
  . *.** **.*****************.

46. spacer 1.8|528|30|NZ_NVYQ01000093|PILER-CR,CRISPRCasFinder,CRT matches to NC_020527 (Sinorhizobium meliloti 2011 plasmid pSymA, complete sequence) position: , mismatch: 8, identity: 0.733

aaaccgagttcaaccgccacgtcgaagaca	CRISPR spacer
tcgacaagatcgaccgccacgtcgaagacg	Protospacer
  . *.** **.*****************.

47. spacer 1.4|264|30|NZ_NVYQ01000093|PILER-CR,CRISPRCasFinder,CRT matches to MG592606 (Vibrio phage 1.240.O._10N.261.52.F8, partial genome) position: , mismatch: 9, identity: 0.7

agtcaatgaatcactaaaagccaagtcaga	CRISPR spacer
cgtcattgaatcactaaatgccaatctttg	Protospacer
 **** ************ ***** ..  .

48. spacer 1.4|264|30|NZ_NVYQ01000093|PILER-CR,CRISPRCasFinder,CRT matches to MG592557 (Vibrio phage 1.189.B._10N.286.51.B5, partial genome) position: , mismatch: 9, identity: 0.7

agtcaatgaatcactaaaagccaagtcaga	CRISPR spacer
cgtcattgaatcactaaatgccaatctttg	Protospacer
 **** ************ ***** ..  .

49. spacer 1.4|264|30|NZ_NVYQ01000093|PILER-CR,CRISPRCasFinder,CRT matches to MG592559 (Vibrio phage 1.189.O._10N.286.51.B5, partial genome) position: , mismatch: 9, identity: 0.7

agtcaatgaatcactaaaagccaagtcaga	CRISPR spacer
cgtcattgaatcactaaatgccaatctttg	Protospacer
 **** ************ ***** ..  .

50. spacer 1.4|264|30|NZ_NVYQ01000093|PILER-CR,CRISPRCasFinder,CRT matches to MG592543 (Vibrio phage 1.176.O._10N.261.55.F5, partial genome) position: , mismatch: 9, identity: 0.7

agtcaatgaatcactaaaagccaagtcaga	CRISPR spacer
cgtcattgaatcactaaatgccaatctttg	Protospacer
 **** ************ ***** ..  .

51. spacer 1.4|264|30|NZ_NVYQ01000093|PILER-CR,CRISPRCasFinder,CRT matches to MG592490 (Vibrio phage 1.116.O._10N.222.52.C10, partial genome) position: , mismatch: 9, identity: 0.7

agtcaatgaatcactaaaagccaagtcaga	CRISPR spacer
cgtcattgaatcactaaatgccaatctttg	Protospacer
 **** ************ ***** ..  .

52. spacer 1.4|264|30|NZ_NVYQ01000093|PILER-CR,CRISPRCasFinder,CRT matches to MG592558 (Vibrio phage 1.189.C._10N.286.51.B5, partial genome) position: , mismatch: 9, identity: 0.7

agtcaatgaatcactaaaagccaagtcaga	CRISPR spacer
cgtcattgaatcactaaatgccaatctttg	Protospacer
 **** ************ ***** ..  .

53. spacer 1.4|264|30|NZ_NVYQ01000093|PILER-CR,CRISPRCasFinder,CRT matches to MG592539 (Vibrio phage 1.172.O._10N.261.52.F5, partial genome) position: , mismatch: 9, identity: 0.7

agtcaatgaatcactaaaagccaagtcaga	CRISPR spacer
cgtcattgaatcactaaatgccaatctttg	Protospacer
 **** ************ ***** ..  .

54. spacer 1.5|330|30|NZ_NVYQ01000093|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013935 (Weissella cibaria strain CMS3 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.7

tttttcgattttttatattgagcgtttttg	CRISPR spacer
tcagggtgttttttagattgagcgtttttt	Protospacer
*.     .******* *************

55. spacer 1.5|330|30|NZ_NVYQ01000093|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013937 (Weissella cibaria strain CMU plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

tttttcgattttttatattgagcgtttttg	CRISPR spacer
tcagggtgttttttagattgagcgtttttt	Protospacer
*.     .******* *************

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

15. NZ_NVYQ01000092

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_NVYQ01000092_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_NVYQ01000092_1

381-1406

Orphan

Consensus_repeat	Method
GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT	PILER-CR
GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT	CRISPRCasFinder
GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT	CRT

15 spacers

The CRISPR arrays of NZ_NVYQ01000092_1

>merge|NZ_NVYQ01000092|1|381-1406|PILER-CR,CRISPRCasFinder,CRT
GTTGTAGCGCCCATTCTCATTTCGCAGTGCTACAATTTCTATTATAAAAGCTGCCTGACTTACTCGGTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAATTCAGGGCTATCGGGGCTGACCGGTTTATTGGTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAATGAGCATTGACACTATTTGTATGGCGTTAAGGTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAATAGCATTTGGGCGGCACGGGCAAAGCCGTCAGTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAATTCCATGTGAACTCGTTGGCGCGTTCGATGAGTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAATTAAACCTCTGTCGGTTGGTTTGCTTAGATTGTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAATCGAATTGGAAAAGTTGCCCTACCGGTGGGGGTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAATGTCGCATGGTAAAATAACCACCGCTTTACAGTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAATAAACTAAAACTTTGGAAAGTTGGAAAGTTGGTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAATCGGCGCATCCCCTTTAATTTAATATCACTTGTTGTAGCTCCCATTCTCATTTCGCAGTGCTACAATTTTTGTGGAGTTTTGTTATGAGTGAGGGCAGTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAATAAGCATTGACGATATTTGTGTGGCGTTGCAGTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAATAAACGCCGGTAGGTTTCGTCTGTCTCCATAGTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAATCTGCAAGCATTTTCATCATCGGCTGTCGTAGTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAATGGAAGAGCGGCATCTGAATGCGGAAGAAGAGTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT

>NZ_NVYQ01000092|1|1|381-1406|PILER-CR
GTTGTAGCGCCCATTCTCATTTCGCAGTGCTACAAT	TTCTATTATAAAAGCTGCCTGACTTACTCG
GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT	TCAGGGCTATCGGGGCTGACCGGTTTATTG
GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT	GAGCATTGACACTATTTGTATGGCGTTAAG
GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT	AGCATTTGGGCGGCACGGGCAAAGCCGTCA
GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT	TCCATGTGAACTCGTTGGCGCGTTCGATGA
GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT	TAAACCTCTGTCGGTTGGTTTGCTTAGATT
GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT	CGAATTGGAAAAGTTGCCCTACCGGTGGGG
GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT	GTCGCATGGTAAAATAACCACCGCTTTACA
GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT	AAACTAAAACTTTGGAAAGTTGGAAAGTTG
GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT	CGGCGCATCCCCTTTAATTTAATATCACTT
GTTGTAGCTCCCATTCTCATTTCGCAGTGCTACAAT	TTTTGTGGAGTTTTGTTATGAGTGAGGGCA
GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT	AAGCATTGACGATATTTGTGTGGCGTTGCA
GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT	AAACGCCGGTAGGTTTCGTCTGTCTCCATA
GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT	CTGCAAGCATTTTCATCATCGGCTGTCGTA
GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT	GGAAGAGCGGCATCTGAATGCGGAAGAAGA
GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT

>NZ_NVYQ01000092|1|1|381-1406|CRISPRCasFinder
GTTGTAGCGCCCATTCTCATTTCGCAGTGCTACAAT	TTCTATTATAAAAGCTGCCTGACTTACTCG
GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT	TCAGGGCTATCGGGGCTGACCGGTTTATTG
GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT	GAGCATTGACACTATTTGTATGGCGTTAAG
GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT	AGCATTTGGGCGGCACGGGCAAAGCCGTCA
GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT	TCCATGTGAACTCGTTGGCGCGTTCGATGA
GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT	TAAACCTCTGTCGGTTGGTTTGCTTAGATT
GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT	CGAATTGGAAAAGTTGCCCTACCGGTGGGG
GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT	GTCGCATGGTAAAATAACCACCGCTTTACA
GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT	AAACTAAAACTTTGGAAAGTTGGAAAGTTG
GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT	CGGCGCATCCCCTTTAATTTAATATCACTT
GTTGTAGCTCCCATTCTCATTTCGCAGTGCTACAAT	TTTTGTGGAGTTTTGTTATGAGTGAGGGCA
GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT	AAGCATTGACGATATTTGTGTGGCGTTGCA
GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT	AAACGCCGGTAGGTTTCGTCTGTCTCCATA
GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT	CTGCAAGCATTTTCATCATCGGCTGTCGTA
GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT	GGAAGAGCGGCATCTGAATGCGGAAGAAGA
GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT

>NZ_NVYQ01000092|1|1|381-1406|CRT
GTTGTAGCGCCCATTCTCATTTCGCAGTGCTACAAT	TTCTATTATAAAAGCTGCCTGACTTACTCG
GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT	TCAGGGCTATCGGGGCTGACCGGTTTATTG
GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT	GAGCATTGACACTATTTGTATGGCGTTAAG
GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT	AGCATTTGGGCGGCACGGGCAAAGCCGTCA
GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT	TCCATGTGAACTCGTTGGCGCGTTCGATGA
GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT	TAAACCTCTGTCGGTTGGTTTGCTTAGATT
GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT	CGAATTGGAAAAGTTGCCCTACCGGTGGGG
GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT	GTCGCATGGTAAAATAACCACCGCTTTACA
GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT	AAACTAAAACTTTGGAAAGTTGGAAAGTTG
GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT	CGGCGCATCCCCTTTAATTTAATATCACTT
GTTGTAGCTCCCATTCTCATTTCGCAGTGCTACAAT	TTTTGTGGAGTTTTGTTATGAGTGAGGGCA
GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT	AAGCATTGACGATATTTGTGTGGCGTTGCA
GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT	AAACGCCGGTAGGTTTCGTCTGTCTCCATA
GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT	CTGCAAGCATTTTCATCATCGGCTGTCGTA
GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT	GGAAGAGCGGCATCTGAATGCGGAAGAAGA
GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT

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Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_NVYQ01000092_1	1.10\|1011\|30\|NZ_NVYQ01000092\|PILER-CR,CRISPRCasFinder,CRT	1011-1040	30	NZ_NVYQ01000028.1	42064-42093	1	0.967
NZ_NVYQ01000092_1	1.11\|1077\|30\|NZ_NVYQ01000092\|PILER-CR,CRISPRCasFinder,CRT	1077-1106	30	NZ_NVYQ01000028.1	7225-7254	0	1.0
NZ_NVYQ01000092_1	1.15\|1341\|30\|NZ_NVYQ01000092\|PILER-CR,CRISPRCasFinder,CRT	1341-1370	30	NZ_NVYQ01000028.1	38794-38823	0	1.0

1. spacer 1.10|1011|30|NZ_NVYQ01000092|PILER-CR,CRISPRCasFinder,CRT matches to position: 42064-42093, mismatch: 1, identity: 0.967

cggcgcatcccctttaatttaatatcactt	CRISPR spacer
cgccgcatcccctttaatttaatatcactt	Protospacer
** ***************************

2. spacer 1.11|1077|30|NZ_NVYQ01000092|PILER-CR,CRISPRCasFinder,CRT matches to position: 7225-7254, mismatch: 0, identity: 1.0

ttttgtggagttttgttatgagtgagggca	CRISPR spacer
ttttgtggagttttgttatgagtgagggca	Protospacer
******************************

3. spacer 1.15|1341|30|NZ_NVYQ01000092|PILER-CR,CRISPRCasFinder,CRT matches to position: 38794-38823, mismatch: 0, identity: 1.0

ggaagagcggcatctgaatgcggaagaaga	CRISPR spacer
ggaagagcggcatctgaatgcggaagaaga	Protospacer
******************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_NVYQ01000092_1	1.10\|1011\|30\|NZ_NVYQ01000092\|PILER-CR,CRISPRCasFinder,CRT	1011-1040	30	NZ_CP024184	Moraxella osloensis strain KSH plasmid p4, complete sequence	53638-53667	6	0.8
NZ_NVYQ01000092_1	1.10\|1011\|30\|NZ_NVYQ01000092\|PILER-CR,CRISPRCasFinder,CRT	1011-1040	30	NZ_CP024186	Moraxella osloensis strain TT16 plasmid p1, complete sequence	99596-99625	6	0.8
NZ_NVYQ01000092_1	1.10\|1011\|30\|NZ_NVYQ01000092\|PILER-CR,CRISPRCasFinder,CRT	1011-1040	30	NZ_CP024177	Moraxella osloensis strain YHS plasmid pYHS1, complete sequence	99564-99593	6	0.8
NZ_NVYQ01000092_1	1.11\|1077\|30\|NZ_NVYQ01000092\|PILER-CR,CRISPRCasFinder,CRT	1077-1106	30	MN393473	Shigella phage Sfin-6, complete genome	18847-18876	6	0.8
NZ_NVYQ01000092_1	1.11\|1077\|30\|NZ_NVYQ01000092\|PILER-CR,CRISPRCasFinder,CRT	1077-1106	30	MF468274	Shigella phage Sfin-1, complete genome	48894-48923	6	0.8
NZ_NVYQ01000092_1	1.11\|1077\|30\|NZ_NVYQ01000092\|PILER-CR,CRISPRCasFinder,CRT	1077-1106	30	MN337573	Shigella phage Sfin-4, complete genome	21562-21591	6	0.8
NZ_NVYQ01000092_1	1.11\|1077\|30\|NZ_NVYQ01000092\|PILER-CR,CRISPRCasFinder,CRT	1077-1106	30	MK972831	Shigella phage Sfin-2, partial genome	12351-12380	6	0.8
NZ_NVYQ01000092_1	1.11\|1077\|30\|NZ_NVYQ01000092\|PILER-CR,CRISPRCasFinder,CRT	1077-1106	30	MN342247	Shigella phage Sfin-5, complete genome	12612-12641	6	0.8
NZ_NVYQ01000092_1	1.11\|1077\|30\|NZ_NVYQ01000092\|PILER-CR,CRISPRCasFinder,CRT	1077-1106	30	NC_049831	Shigella virus Sfin-3, complete genome	13604-13633	6	0.8
NZ_NVYQ01000092_1	1.11\|1077\|30\|NZ_NVYQ01000092\|PILER-CR,CRISPRCasFinder,CRT	1077-1106	30	MH917278	Shigella phage phi2457T, complete genome	17595-17624	6	0.8
NZ_NVYQ01000092_1	1.3\|549\|30\|NZ_NVYQ01000092\|PILER-CR,CRISPRCasFinder,CRT	549-578	30	NZ_CP004877	Bacillus thuringiensis serovar kurstaki str. HD-1 plasmid pBMB431, complete sequence	110726-110755	7	0.767
NZ_NVYQ01000092_1	1.3\|549\|30\|NZ_NVYQ01000092\|PILER-CR,CRISPRCasFinder,CRT	549-578	30	NZ_CP011350	Bacillus thuringiensis strain YC-10 plasmid pYC1, complete sequence	145342-145371	7	0.767
NZ_NVYQ01000092_1	1.3\|549\|30\|NZ_NVYQ01000092\|PILER-CR,CRISPRCasFinder,CRT	549-578	30	NZ_CP007616	Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB400, complete sequence	247905-247934	7	0.767
NZ_NVYQ01000092_1	1.3\|549\|30\|NZ_NVYQ01000092\|PILER-CR,CRISPRCasFinder,CRT	549-578	30	NZ_CP004860	Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB422, complete sequence	130520-130549	7	0.767
NZ_NVYQ01000092_1	1.4\|615\|30\|NZ_NVYQ01000092\|PILER-CR,CRISPRCasFinder,CRT	615-644	30	NC_009620	Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequence	757899-757928	7	0.767
NZ_NVYQ01000092_1	1.5\|681\|30\|NZ_NVYQ01000092\|PILER-CR,CRISPRCasFinder,CRT	681-710	30	NZ_CP029209	Nitratireductor sp. OM-1 plasmid pOM-1, complete sequence	592017-592046	7	0.767
NZ_NVYQ01000092_1	1.5\|681\|30\|NZ_NVYQ01000092\|PILER-CR,CRISPRCasFinder,CRT	681-710	30	MK494098	Gordonia phage Tredge, complete genome	20497-20526	7	0.767
NZ_NVYQ01000092_1	1.5\|681\|30\|NZ_NVYQ01000092\|PILER-CR,CRISPRCasFinder,CRT	681-710	30	NC_041950	Gordonia phage Katyusha, complete genome	20595-20624	7	0.767
NZ_NVYQ01000092_1	1.5\|681\|30\|NZ_NVYQ01000092\|PILER-CR,CRISPRCasFinder,CRT	681-710	30	KU963262	Gordonia phage Benczkowski14, complete genome	20595-20624	7	0.767
NZ_NVYQ01000092_1	1.5\|681\|30\|NZ_NVYQ01000092\|PILER-CR,CRISPRCasFinder,CRT	681-710	30	KU998243	Gordonia phage Kvothe, complete genome	20515-20544	7	0.767
NZ_NVYQ01000092_1	1.5\|681\|30\|NZ_NVYQ01000092\|PILER-CR,CRISPRCasFinder,CRT	681-710	30	MH576976	Gordonia phage Teatealatte, complete genome	20497-20526	7	0.767
NZ_NVYQ01000092_1	1.11\|1077\|30\|NZ_NVYQ01000092\|PILER-CR,CRISPRCasFinder,CRT	1077-1106	30	MG945497	UNVERIFIED: Microviridae sp. isolate 1636-1702, complete genome	3689-3718	7	0.767
NZ_NVYQ01000092_1	1.14\|1275\|30\|NZ_NVYQ01000092\|PILER-CR,CRISPRCasFinder,CRT	1275-1304	30	AP018321	Nostoc sp. HK-01 plasmid plasmid3 DNA, complete genome	81252-81281	7	0.767
NZ_NVYQ01000092_1	1.2\|483\|30\|NZ_NVYQ01000092\|PILER-CR,CRISPRCasFinder,CRT	483-512	30	MN694055	Marine virus AFVG_250M1074, complete genome	23801-23830	8	0.733
NZ_NVYQ01000092_1	1.2\|483\|30\|NZ_NVYQ01000092\|PILER-CR,CRISPRCasFinder,CRT	483-512	30	MN693799	Marine virus AFVG_250M1075, complete genome	23964-23993	8	0.733
NZ_NVYQ01000092_1	1.2\|483\|30\|NZ_NVYQ01000092\|PILER-CR,CRISPRCasFinder,CRT	483-512	30	MN693650	Marine virus AFVG_250M1058, complete genome	23539-23568	8	0.733
NZ_NVYQ01000092_1	1.4\|615\|30\|NZ_NVYQ01000092\|PILER-CR,CRISPRCasFinder,CRT	615-644	30	NZ_LN907828	Erwinia gerundensis isolate E_g_EM595 plasmid pEM01, complete sequence	78900-78929	8	0.733
NZ_NVYQ01000092_1	1.4\|615\|30\|NZ_NVYQ01000092\|PILER-CR,CRISPRCasFinder,CRT	615-644	30	MN693688	Marine virus AFVG_250M167, complete genome	27817-27846	8	0.733
NZ_NVYQ01000092_1	1.9\|945\|30\|NZ_NVYQ01000092\|PILER-CR,CRISPRCasFinder,CRT	945-974	30	MN693063	Marine virus AFVG_25M261, complete genome	6946-6975	8	0.733
NZ_NVYQ01000092_1	1.10\|1011\|30\|NZ_NVYQ01000092\|PILER-CR,CRISPRCasFinder,CRT	1011-1040	30	NZ_CP022984	Bacillus kochii strain BDGP4 plasmid pBkBDGP4A, complete sequence	96015-96044	8	0.733
NZ_NVYQ01000092_1	1.12\|1143\|30\|NZ_NVYQ01000092\|PILER-CR,CRISPRCasFinder,CRT	1143-1172	30	NZ_CP024200	Thalassospira marina strain CSC3H3 plasmid pCSC3H3, complete sequence	742108-742137	8	0.733
NZ_NVYQ01000092_1	1.4\|615\|30\|NZ_NVYQ01000092\|PILER-CR,CRISPRCasFinder,CRT	615-644	30	MK929790	Caulobacter phage RW, complete genome	35547-35576	9	0.7
NZ_NVYQ01000092_1	1.11\|1077\|30\|NZ_NVYQ01000092\|PILER-CR,CRISPRCasFinder,CRT	1077-1106	30	NZ_CP021643	Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence	34138-34167	9	0.7
NZ_NVYQ01000092_1	1.11\|1077\|30\|NZ_NVYQ01000092\|PILER-CR,CRISPRCasFinder,CRT	1077-1106	30	NC_009795	Campylobacter concisus 13826 plasmid pCCON31, complete sequence	25612-25641	9	0.7

1. spacer 1.10|1011|30|NZ_NVYQ01000092|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024184 (Moraxella osloensis strain KSH plasmid p4, complete sequence) position: , mismatch: 6, identity: 0.8

cggcgcatcccctttaatttaatatcactt	CRISPR spacer
tagagcatcccctttaatttaatattacgg	Protospacer
..* *********************.**

2. spacer 1.10|1011|30|NZ_NVYQ01000092|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024186 (Moraxella osloensis strain TT16 plasmid p1, complete sequence) position: , mismatch: 6, identity: 0.8

cggcgcatcccctttaatttaatatcactt	CRISPR spacer
tagagcatcccctttaatttaatattacgg	Protospacer
..* *********************.**

3. spacer 1.10|1011|30|NZ_NVYQ01000092|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024177 (Moraxella osloensis strain YHS plasmid pYHS1, complete sequence) position: , mismatch: 6, identity: 0.8

cggcgcatcccctttaatttaatatcactt	CRISPR spacer
tagagcatcccctttaatttaatattacgg	Protospacer
..* *********************.**

4. spacer 1.11|1077|30|NZ_NVYQ01000092|PILER-CR,CRISPRCasFinder,CRT matches to MN393473 (Shigella phage Sfin-6, complete genome) position: , mismatch: 6, identity: 0.8

ttttgtggagttttgttatgagtgagggca	CRISPR spacer
ttttgtggagtttggttatgaatcaagaaa	Protospacer
************* *******.* *.*. *

5. spacer 1.11|1077|30|NZ_NVYQ01000092|PILER-CR,CRISPRCasFinder,CRT matches to MF468274 (Shigella phage Sfin-1, complete genome) position: , mismatch: 6, identity: 0.8

ttttgtggagttttgttatgagtgagggca	CRISPR spacer
ttttgtggagtttggttatgaatcaagaaa	Protospacer
************* *******.* *.*. *

6. spacer 1.11|1077|30|NZ_NVYQ01000092|PILER-CR,CRISPRCasFinder,CRT matches to MN337573 (Shigella phage Sfin-4, complete genome) position: , mismatch: 6, identity: 0.8

ttttgtggagttttgttatgagtgagggca	CRISPR spacer
ttttgtggagtttggttatgaatcaagaaa	Protospacer
************* *******.* *.*. *

7. spacer 1.11|1077|30|NZ_NVYQ01000092|PILER-CR,CRISPRCasFinder,CRT matches to MK972831 (Shigella phage Sfin-2, partial genome) position: , mismatch: 6, identity: 0.8

ttttgtggagttttgttatgagtgagggca	CRISPR spacer
ttttgtggagtttggttatgaatcaagaaa	Protospacer
************* *******.* *.*. *

8. spacer 1.11|1077|30|NZ_NVYQ01000092|PILER-CR,CRISPRCasFinder,CRT matches to MN342247 (Shigella phage Sfin-5, complete genome) position: , mismatch: 6, identity: 0.8

ttttgtggagttttgttatgagtgagggca	CRISPR spacer
ttttgtggagtttggttatgaatcaagaaa	Protospacer
************* *******.* *.*. *

9. spacer 1.11|1077|30|NZ_NVYQ01000092|PILER-CR,CRISPRCasFinder,CRT matches to NC_049831 (Shigella virus Sfin-3, complete genome) position: , mismatch: 6, identity: 0.8

ttttgtggagttttgttatgagtgagggca	CRISPR spacer
ttttgtggagtttggttatgaatcaagaaa	Protospacer
************* *******.* *.*. *

10. spacer 1.11|1077|30|NZ_NVYQ01000092|PILER-CR,CRISPRCasFinder,CRT matches to MH917278 (Shigella phage phi2457T, complete genome) position: , mismatch: 6, identity: 0.8

ttttgtggagttttgttatgagtgagggca	CRISPR spacer
ttttgtggagtttggttatgaatcaagaaa	Protospacer
************* *******.* *.*. *

11. spacer 1.3|549|30|NZ_NVYQ01000092|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP004877 (Bacillus thuringiensis serovar kurstaki str. HD-1 plasmid pBMB431, complete sequence) position: , mismatch: 7, identity: 0.767

gagcattgacactatttgtatggcgttaag	CRISPR spacer
catagttgacactatttgtatagtgttaat	Protospacer
 *  .****************.*.*****

12. spacer 1.3|549|30|NZ_NVYQ01000092|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011350 (Bacillus thuringiensis strain YC-10 plasmid pYC1, complete sequence) position: , mismatch: 7, identity: 0.767

gagcattgacactatttgtatggcgttaag	CRISPR spacer
catagttgacactatttgtatagtgttaat	Protospacer
 *  .****************.*.*****

13. spacer 1.3|549|30|NZ_NVYQ01000092|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007616 (Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB400, complete sequence) position: , mismatch: 7, identity: 0.767

gagcattgacactatttgtatggcgttaag	CRISPR spacer
catagttgacactatttgtatagtgttaat	Protospacer
 *  .****************.*.*****

14. spacer 1.3|549|30|NZ_NVYQ01000092|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP004860 (Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB422, complete sequence) position: , mismatch: 7, identity: 0.767

gagcattgacactatttgtatggcgttaag	CRISPR spacer
catagttgacactatttgtatagtgttaat	Protospacer
 *  .****************.*.*****

15. spacer 1.4|615|30|NZ_NVYQ01000092|PILER-CR,CRISPRCasFinder,CRT matches to NC_009620 (Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequence) position: , mismatch: 7, identity: 0.767

agcatttgggcggcacgggcaaagccgtca	CRISPR spacer
agatgctgggcggcaagggcaaagccgtgg	Protospacer
**   .********* ************ .

16. spacer 1.5|681|30|NZ_NVYQ01000092|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029209 (Nitratireductor sp. OM-1 plasmid pOM-1, complete sequence) position: , mismatch: 7, identity: 0.767

tccatgtgaactcgttggcgcgttcgatga	CRISPR spacer
gccatgtgaacacgatggcgcgttccgtct	Protospacer
 ********** ** ********** .*

17. spacer 1.5|681|30|NZ_NVYQ01000092|PILER-CR,CRISPRCasFinder,CRT matches to MK494098 (Gordonia phage Tredge, complete genome) position: , mismatch: 7, identity: 0.767

tccatgtgaactcgttggcgcgttcgatga	CRISPR spacer
gcttgttgaactcgtcggcgcgctcgatga	Protospacer
 *.   *********.******.*******

18. spacer 1.5|681|30|NZ_NVYQ01000092|PILER-CR,CRISPRCasFinder,CRT matches to NC_041950 (Gordonia phage Katyusha, complete genome) position: , mismatch: 7, identity: 0.767

tccatgtgaactcgttggcgcgttcgatga	CRISPR spacer
gcttgttgaactcgtcggcgcgctcgatga	Protospacer
 *.   *********.******.*******

19. spacer 1.5|681|30|NZ_NVYQ01000092|PILER-CR,CRISPRCasFinder,CRT matches to KU963262 (Gordonia phage Benczkowski14, complete genome) position: , mismatch: 7, identity: 0.767

tccatgtgaactcgttggcgcgttcgatga	CRISPR spacer
gcttgttgaactcgtcggcgcgctcgatga	Protospacer
 *.   *********.******.*******

20. spacer 1.5|681|30|NZ_NVYQ01000092|PILER-CR,CRISPRCasFinder,CRT matches to KU998243 (Gordonia phage Kvothe, complete genome) position: , mismatch: 7, identity: 0.767

tccatgtgaactcgttggcgcgttcgatga	CRISPR spacer
gcttgttgaactcgtcggcgcgctcgatga	Protospacer
 *.   *********.******.*******

21. spacer 1.5|681|30|NZ_NVYQ01000092|PILER-CR,CRISPRCasFinder,CRT matches to MH576976 (Gordonia phage Teatealatte, complete genome) position: , mismatch: 7, identity: 0.767

tccatgtgaactcgttggcgcgttcgatga	CRISPR spacer
gcttgttgaactcgtcggcgcgctcgatga	Protospacer
 *.   *********.******.*******

22. spacer 1.11|1077|30|NZ_NVYQ01000092|PILER-CR,CRISPRCasFinder,CRT matches to MG945497 (UNVERIFIED: Microviridae sp. isolate 1636-1702, complete genome) position: , mismatch: 7, identity: 0.767

ttttgtggagttttgttatgagtgagggca	CRISPR spacer
ttttatggagtttttttatgagtgtttcta	Protospacer
****.********* *********    .*

23. spacer 1.14|1275|30|NZ_NVYQ01000092|PILER-CR,CRISPRCasFinder,CRT matches to AP018321 (Nostoc sp. HK-01 plasmid plasmid3 DNA, complete genome) position: , mismatch: 7, identity: 0.767

ctgcaagcattttcatcatcggctgtcgta	CRISPR spacer
attcaagcattttcatcatctgttgtaaga	Protospacer
 * ***************** *.*** . *

24. spacer 1.2|483|30|NZ_NVYQ01000092|PILER-CR,CRISPRCasFinder,CRT matches to MN694055 (Marine virus AFVG_250M1074, complete genome) position: , mismatch: 8, identity: 0.733

tcagggctatcggggctgaccggtttattg	CRISPR spacer
acagggctatcgggactggccggtcgagaa	Protospacer
 *************.***.*****. *  .

25. spacer 1.2|483|30|NZ_NVYQ01000092|PILER-CR,CRISPRCasFinder,CRT matches to MN693799 (Marine virus AFVG_250M1075, complete genome) position: , mismatch: 8, identity: 0.733

tcagggctatcggggctgaccggtttattg	CRISPR spacer
acagggctatcgggactggccggtcgagaa	Protospacer
 *************.***.*****. *  .

26. spacer 1.2|483|30|NZ_NVYQ01000092|PILER-CR,CRISPRCasFinder,CRT matches to MN693650 (Marine virus AFVG_250M1058, complete genome) position: , mismatch: 8, identity: 0.733

tcagggctatcggggctgaccggtttattg	CRISPR spacer
acagggctatcgggactggccggtcgagaa	Protospacer
 *************.***.*****. *  .

27. spacer 1.4|615|30|NZ_NVYQ01000092|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LN907828 (Erwinia gerundensis isolate E_g_EM595 plasmid pEM01, complete sequence) position: , mismatch: 8, identity: 0.733

agcatttgggcggcacgggcaaagccgtca	CRISPR spacer
agcatttcggcggcacgggtaaaattttgc	Protospacer
******* ***********.***... *

28. spacer 1.4|615|30|NZ_NVYQ01000092|PILER-CR,CRISPRCasFinder,CRT matches to MN693688 (Marine virus AFVG_250M167, complete genome) position: , mismatch: 8, identity: 0.733

agcatttgggcggcacgggcaaagccgtca	CRISPR spacer
aggagttgggcggcacgggcaaaaaaccaa	Protospacer
** * ******************.   . *

29. spacer 1.9|945|30|NZ_NVYQ01000092|PILER-CR,CRISPRCasFinder,CRT matches to MN693063 (Marine virus AFVG_25M261, complete genome) position: , mismatch: 8, identity: 0.733

aaactaaaactttggaaagttggaaagttg	CRISPR spacer
gctttaaaactttagaacgttggaaaggag	Protospacer
.  .*********.*** *********  *

30. spacer 1.10|1011|30|NZ_NVYQ01000092|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022984 (Bacillus kochii strain BDGP4 plasmid pBkBDGP4A, complete sequence) position: , mismatch: 8, identity: 0.733

cggcgcatcccctttaatttaatatcactt	CRISPR spacer
cgataatcgccctttaattgaatatcactt	Protospacer
**...  . ********** **********

31. spacer 1.12|1143|30|NZ_NVYQ01000092|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024200 (Thalassospira marina strain CSC3H3 plasmid pCSC3H3, complete sequence) position: , mismatch: 8, identity: 0.733

aagcattgacgatatttgtgtggcgttgca	CRISPR spacer
cagcattgacgatatttgtcaggccggggc	Protospacer
 ******************  ***   *

32. spacer 1.4|615|30|NZ_NVYQ01000092|PILER-CR,CRISPRCasFinder,CRT matches to MK929790 (Caulobacter phage RW, complete genome) position: , mismatch: 9, identity: 0.7

agcatttgggcggcacgggcaaagccgtca	CRISPR spacer
aaggcatgggcggcacgggcaacgccgcgc	Protospacer
*. .. **************** ****.

33. spacer 1.11|1077|30|NZ_NVYQ01000092|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021643 (Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence) position: , mismatch: 9, identity: 0.7

ttttgtggagttttgttatgagtgagggca	CRISPR spacer
ctttgtagagttttgttatgagaataatga	Protospacer
.*****.*************** . ..  *

34. spacer 1.11|1077|30|NZ_NVYQ01000092|PILER-CR,CRISPRCasFinder,CRT matches to NC_009795 (Campylobacter concisus 13826 plasmid pCCON31, complete sequence) position: , mismatch: 9, identity: 0.7

ttttgtggagttttgttatgagtgagggca	CRISPR spacer
ctttgtagagttttgttatgagaataatga	Protospacer
.*****.*************** . ..  *

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

16. NZ_NVYQ01000065

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_NVYQ01000065_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_NVYQ01000065_1

6565-6669

Orphan

I-E

Consensus_repeat	Method
GTCATTCCCGCGCAGGCGGGAATCTAGTCCGTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_NVYQ01000065_1

>merge|NZ_NVYQ01000065|1|6565-6669|CRISPRCasFinder
GTCATTCCCGCGCAGGCGGGAATCTAGTCCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTCCCGCGCAGGCGGGAATCCAGTCCGTT

>NZ_NVYQ01000065|1|1|6565-6669|CRISPRCasFinder
GTCATTCCCGCGCAGGCGGGAATCTAGTCCGTT	CGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTC
GTCATTCCCGCGCAGGCGGGAATCCAGTCCGTT

>NZ_NVYQ01000065.1|WP_002225823.1|5678_6521_+|glycosyltransferase-family-25-protein
MQNHVISLASAAERRAHIAATFGVRGIPFQFFDALMPSEELNRMMAELVPGLAKQHLLSEVEKACFMSHAVLWKQALDEGLPYVAVFEDDVLLGKDAEKFLAEDTWLEERFDKDSAFIVRLETMFAKVIVRPDKVLNYENRSFPLLESEHWGTAGYIISREAMRFFLERFAVLPAEWIKAVDWMMFTYFFDKEGMPVYQVNPALCTQELHYAKFLSKNSMLGSDLEKDREQERRHRRSLKVMFDLKRALGKFGREKKKRMERQRQAELEKAYGRRVISFK
>NZ_NVYQ01000065.1|WP_002233110.1|5541_5637_+|hypothetical-protein
MDIVFAADGRMRRLFTLRQYFGILRRLLKNR
>NZ_NVYQ01000065.1|WP_002225824.1|4702_5530_+|glycosyltransferase-family-25-protein
MQNHVISLASAAERRAHIADTFGRHGIPFQFFDALMPSERLEQAMAELVPGLSAHPYLSGVEKACFMSHAVLWKQALDEGLPYITVFEDDVLLGEGAEKFLAEDAWLQERFDPDTAFIVRLETMFMHVLTSPSGVADYCGRAFPLLESEHWGTAGYIISRKAMRFFLDRFAALPPEGLHPVDLMMFSDFFDREGMPVCQLNPALCAQELHYAKFHDQNSALGSLIEHDRLLNRKQQRRDSPANTFKHRLIRALTKISREREKRRQRREQFIVPFQ
>NZ_NVYQ01000065.1|WP_021437851.1|3614_4661_+|glycosyltransferase-family-2-protein
MPSEAFRRHRAYRENKLQPLVSVLICAYNVEKYFAQSLAAVVNQTWRNLDILIVDDGSTDGTLAIAQRFQEQDGRIRILAQPRNSGLIPSLNIGLDELAKSGGGEYIARTDADDIAAPDWIEKIVGEMEKDRSIIAMGAWLEVLSEEKDGNRLARHHEHGKIWKKPTRHEDIADFFPFGNPIHNNTMIMRRSVIDGGLRYNTERDWAEDYQFWYDVSKLGRLAYYPEALVKYRLHANQVSSKYSIRQHEIAQGIQKTARNDFLQSMGFKTRFDSLEYRQIKAVAYELLEKHLPEEDFERARRFLYQCFKRTDTLPAGAWLDFAADGRMRRLFTLRQYFGILHRLLKNR
>NZ_NVYQ01000065.1|WP_002244319.1|1534_3598_+|glycine--tRNA-ligase-subunit-beta
MMTQTLLIELLTEELPPKALNNLGNHFAASVAEGLEKAQLVDGAAEFTAYASPRRLAVQVKNVKAVQADQKIVKKGPAVANAMKDGAPTKALEGFARGAGAKIEDLTIVHDGKQDVYAYEYVQIGKPLGGLLEDIINQAVKKLPIPKVMRWGSSTFTFVRPVHGLVVLHGGDIVNVSVLGLQSGNKTLGHRFLSDGEITIENADSYAAQMREQGKVVASFAERKAAIQTVLEGQARRLNATAAADEALLDEVTALVEWPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFLLVSNLQTEDPSHIIQGNERVLRARLSDAEFFYKQDQKATLESRLPKLTNVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERAARLAKADLVTEMVGEFPELQGTMGKYYARLDGETEEITEAVEQHYQPRFAGDNLPEGKIAAAVALADKLETLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFNSFPQGLLNEKTPSETADFMQARLAVLLQNDYPQDIVAAVLAKQPRRLDDLTAKLQAVAAFKQLPEAAALAAANKRVQNLLKKADAELGAVNESLLQQDEEKALFAAAQGLQPKIAAAVAEGNFQTALSELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADIALLGE
>NZ_NVYQ01000065.1|WP_002218046.1|123_1029_+|glycine--tRNA-ligase-subunit-alpha
MLTFQQIIFKLQTFWADKGCTVIQPFDMEVGAGTSHPATCLRALGPEPWFAAYVQPSRRPKDGRYGDNPNRLQHYYQFQVALKPAPANIQDLYLDSLRELGIDPKVHDIRFVEDDWENPTLGAWGLGWEVWLNGMEVTQFTYFQQVGGIDCTPVLGEITYGIERLAMYLQGVENVYDLVWAKTLDGNTVTYGDVYHQNEVEQSTYNFEYSDADWLLRQFNDYEAQAKRLLAEENAALALPAYELVLKAGHTFNLLDARGAISVTERATYIGRIRALSRAVAQKYVESREKLGFPLMKANAA

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_NVYQ01000065_1	1.1\|6598\|39\|NZ_NVYQ01000065\|CRISPRCasFinder	6598-6636	39	NZ_NVYQ01000019.1	332-370	0	1.0
NZ_NVYQ01000065_1	1.1\|6598\|39\|NZ_NVYQ01000065\|CRISPRCasFinder	6598-6636	39	NZ_NVYQ01000176.1	2204-2242	1	0.974
NZ_NVYQ01000065_1	1.1\|6598\|39\|NZ_NVYQ01000065\|CRISPRCasFinder	6598-6636	39	NZ_NVYQ01000267.1	34-72	0	1.0
NZ_NVYQ01000065_1	1.1\|6598\|39\|NZ_NVYQ01000065\|CRISPRCasFinder	6598-6636	39	NZ_NVYQ01000282.1	17-55	0	1.0

1. spacer 1.1|6598|39|NZ_NVYQ01000065|CRISPRCasFinder matches to position: 332-370, mismatch: 0, identity: 1.0

cggtttcgcttgttttaagtttcgggtaacttccacttc	CRISPR spacer
cggtttcgcttgttttaagtttcgggtaacttccacttc	Protospacer
***************************************

2. spacer 1.1|6598|39|NZ_NVYQ01000065|CRISPRCasFinder matches to position: 2204-2242, mismatch: 1, identity: 0.974

cggtttcgcttgttttaagtttcgggtaacttccacttc	CRISPR spacer
cggtttcacttgttttaagtttcgggtaacttccacttc	Protospacer
*******.*******************************

3. spacer 1.1|6598|39|NZ_NVYQ01000065|CRISPRCasFinder matches to position: 34-72, mismatch: 0, identity: 1.0

cggtttcgcttgttttaagtttcgggtaacttccacttc	CRISPR spacer
cggtttcgcttgttttaagtttcgggtaacttccacttc	Protospacer
***************************************

4. spacer 1.1|6598|39|NZ_NVYQ01000065|CRISPRCasFinder matches to position: 17-55, mismatch: 0, identity: 1.0

cggtttcgcttgttttaagtttcgggtaacttccacttc	CRISPR spacer
cggtttcgcttgttttaagtttcgggtaacttccacttc	Protospacer
***************************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

17. NZ_NVYQ01000210

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

18. NZ_NVYQ01000282

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

19. NZ_NVYQ01000049

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

20. NZ_NVYQ01000131

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_NVYQ01000131_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_NVYQ01000131_1

11256-11365

Orphan

Consensus_repeat	Method
TTGCGTAGGGTGGGCTTCAGCCCACC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_NVYQ01000131_1

>merge|NZ_NVYQ01000131|1|11256-11365|CRISPRCasFinder
TTGCGTAGGGTGGGCTTCAGCCCACCAACTCCCACCAACTCCCACCATCTTCACCCTAAAACCCCGTCATCTCCGCAAAAGCAATTGCGTAGGGTGGGCTTCAGCCCACC

>NZ_NVYQ01000131|1|1|11256-11365|CRISPRCasFinder
TTGCGTAGGGTGGGCTTCAGCCCACC	AACTCCCACCAACTCCCACCATCTTCACCCTAAAACCCCGTCATCTCCGCAAAAGCAA
TTGCGTAGGGTGGGCTTCAGCCCACC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_NVYQ01000131.1\|WP_101116182.1\|17473_18226_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|377360
NZ_NVYQ01000131.1\|WP_002212800.1\|148_484_-\|carboxymuconolactone-decarboxylase-family-protein	unknown	unknown	gnl\|CDD\|223672
NZ_NVYQ01000131.1\|WP_002226177.1\|22186_22993_+\|basic-amino-acid-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270342
NZ_NVYQ01000131.1\|WP_002235076.1\|12029_12713_-\|2,3-diphosphoglycerate-dependent-phosphoglycerate-mutase	unknown	unknown	gnl\|CDD\|172608
NZ_NVYQ01000131.1\|WP_025459907.1\|4492_7117_+\|alanine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234701
NZ_NVYQ01000131.1\|WP_002212784.1\|16902_17370_+\|response-regulator	unknown	unknown	gnl\|CDD\|381153
NZ_NVYQ01000131.1\|WP_002231880.1\|1579_2068_-\|lipoprotein	unknown	unknown	gnl\|CDD\|369706
NZ_NVYQ01000131.1\|WP_002212781.1\|19262_19469_-\|DUF2788-domain-containing-protein	unknown	unknown	gnl\|CDD\|378526
NZ_NVYQ01000131.1\|WP_002235074.1\|8492_9110_+\|hypothetical-protein	unknown	unknown	unknown
NZ_NVYQ01000131.1\|WP_002223553.1\|3157_4288_-\|polyamine-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270377
NZ_NVYQ01000131.1\|WP_002218963.1\|21883_22135_+\|hypothetical-protein	unknown	unknown	unknown
NZ_NVYQ01000131.1\|WP_002212793.1\|7178_7910_+\|hypothetical-protein	unknown	unknown	unknown
NZ_NVYQ01000131.1\|WP_117375339.1\|15333_16851_+\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|236901
NZ_NVYQ01000131.1\|WP_025459910.1\|19555_20725_-\|O-succinylhomoserine-sulfhydrylase	unknown	unknown	gnl\|CDD\|188131
NZ_NVYQ01000131.1\|WP_002212778.1\|21022_21784_-\|hypothetical-protein	unknown	unknown	unknown
NZ_NVYQ01000131.1\|WP_002216775.1\|612_1518_+\|cupin-domain-containing-protein	unknown	unknown	gnl\|CDD\|225117
NZ_NVYQ01000131.1\|WP_014580992.1\|2214_3117_+\|DMT-family-transporter	unknown	unknown	gnl\|CDD\|223769
NZ_NVYQ01000131.1\|WP_033910281.1\|13009_15313_+\|DNA-topoisomerase-IV-subunit-A	unknown	unknown	gnl\|CDD\|235503

Protein	Function_ID	Function_description	E-value
NZ_NVYQ01000131.1\|WP_002212800.1\|148_484_-\|carboxymuconolactone-decarboxylase-family-protein	gnl\|CDD\|223672	COG0599, COG0599, Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit [Function unknown].	1.94664e-17
NZ_NVYQ01000131.1\|WP_002235076.1\|12029_12713_-\|2,3-diphosphoglycerate-dependent-phosphoglycerate-mutase	gnl\|CDD\|172608	PRK14118, gpmA, 2,3-diphosphoglycerate-dependent phosphoglycerate mutase.	2.75984e-165
NZ_NVYQ01000131.1\|WP_025459907.1\|4492_7117_+\|alanine--tRNA-ligase	gnl\|CDD\|234701	PRK00252, alaS, alanyl-tRNA synthetase; Reviewed.	0
NZ_NVYQ01000131.1\|WP_002212784.1\|16902_17370_+\|response-regulator	gnl\|CDD\|381153	cd19926, REC_PilR, phosphoacceptor receiver (REC) domain of type 4 fimbriae expression regulatory protein PilR and similar proteins. Pseudomonas aeruginosa PilR is the response regulator of the PilS/PilR two-component regulatory system (PilSR TCS) that acts in conjunction with sigma-54 to regulate the expression of type 4 pilus (T4P) major subunit PilA. In addition, the PilSR TCS regulates flagellum-dependent swimming motility and pilus-dependent twitching motility. PilR contains an N-terminal REC domain, a central sigma-54 interaction domain, and a C-terminal Fis-type helix-turn-helix DNA-binding domain. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	2.12443e-55
NZ_NVYQ01000131.1\|WP_002216775.1\|612_1518_+\|cupin-domain-containing-protein	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	1.69204e-26
NZ_NVYQ01000131.1\|WP_002223553.1\|3157_4288_-\|polyamine-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270377	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold. This group represents the periplasmic substrate-binding domain that serves as the primary polyamine receptor of ABC-type putrescine-preferential transporter from gram-negative bacteria. Polyamine transport plays an essential role in the regulation of intracellular polyamine levels which are known to be elevated in rapidly proliferating cells and tumors. Natural polyamines are putrescine, spermindine, and spermine. They are polycations that play multiple roles in cell growth, survival and proliferation, and plant stress and disease resistance. They can interact with negatively charged molecules, such as nucleic acids, to modulate their functions. Members of this family belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	0
NZ_NVYQ01000131.1\|WP_002231880.1\|1579_2068_-\|lipoprotein	gnl\|CDD\|369706	pfam08139, LPAM_1, Prokaryotic membrane lipoprotein lipid attachment site. In prokaryotes, membrane lipoproteins are synthesized with a precursor signal peptide, which is cleaved by a specific lipoprotein signal peptidase (signal peptidase II). The peptidase recognizes a conserved sequence and cuts upstream of a cysteine residue to which a glyceride-fatty acid lipid is attached.	0.00270287
NZ_NVYQ01000131.1\|WP_002212781.1\|19262_19469_-\|DUF2788-domain-containing-protein	gnl\|CDD\|378526	pfam10981, DUF2788, Protein of unknown function (DUF2788). This bacterial family of proteins have no known function.	6.34727e-11
NZ_NVYQ01000131.1\|WP_117375339.1\|15333_16851_+\|sensor-histidine-kinase	gnl\|CDD\|236901	PRK11360, PRK11360, two-component system sensor histidine kinase AtoS.	1.41965e-13
NZ_NVYQ01000131.1\|WP_025459910.1\|19555_20725_-\|O-succinylhomoserine-sulfhydrylase	gnl\|CDD\|188131	TIGR01325, O_suc_HS_sulf, O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis. [Amino acid biosynthesis, Aspartate family].	0
NZ_NVYQ01000131.1\|WP_002226177.1\|22186_22993_+\|basic-amino-acid-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270342	cd13624, PBP2_Arg_Lys_His, Substrate binding domain of the arginine-, lysine-, histidine-binding protein ArtJ; the type 2 periplasmic binding protein fold. This group includes the periplasmic substrate-binding protein ArtJ of the ATP-binding cassette (ABC) transport system from the thermophilic bacterium Geobacillus stearothermophilus, which is specific for arginine, lysine, and histidine. ArtJ belongs to the type 2 periplasmic-binding fold protein (PBP2) superfamily, whose members are involved in chemotaxis and uptake of nutrients and other small molecules from the extracellular space as a primary receptor. PBP2 typically comprises of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two receptor cytoplasmically-located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	3.37988e-101
NZ_NVYQ01000131.1\|WP_101116182.1\|17473_18226_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|377360	pfam04445, SAM_MT, Putative SAM-dependent methyltransferase. This is a family of putative SAM-dependent methyltransferases.	1.65402e-114
NZ_NVYQ01000131.1\|WP_014580992.1\|2214_3117_+\|DMT-family-transporter	gnl\|CDD\|223769	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only].	3.75902e-12
NZ_NVYQ01000131.1\|WP_033910281.1\|13009_15313_+\|DNA-topoisomerase-IV-subunit-A	gnl\|CDD\|235503	PRK05561, PRK05561, DNA topoisomerase 4 subunit A.	0

>NZ_NVYQ01000131.1|WP_002235074.1|8492_9110_+|hypothetical-protein
MQEIGRTKPSALPEYYAVSDFAHFHLYRRVPEEGVENQWQFPLEALPEYITRGVFDFMFGIEAKVRQIQEEADIQAAAAIGRLHDALKEEGIYEEHELRLFITRLLFLFFADDSAVFQRNYLFQDFLESCKETDTLGDKLNQLFEFLNTPDQKRSKTQSEKFKGFEYVNGGLFKERLRTFDFTAKQHRALIDCGNFDWRNMRPLQ
>NZ_NVYQ01000131.1|WP_002212793.1|7178_7910_+|hypothetical-protein
MNTKTELQKLLEEDISTLTETLICADALPPRYVRSIATPIVRRWLIDKQLNILAKEIGLTIELPILDTSLVFEKLSTLENKVNFYMAGGVYLGGEFISSIYHSSQEFSGEPIIYAEPNIILCPAEKFLTLKRVFHNGNIFNMNQIITFLSNKQGGVHFDKNYDKYKTWQVAIEKAANFLKLGNPYNEDKLSLSEEHDTILVVLPLEKGYEWNCLEIEVLSAAQSLANIYCNKVRLIDGHVWKE
>NZ_NVYQ01000131.1|WP_025459907.1|4492_7117_+|alanine--tRNA-ligase
MKTSELRQKFLKFFETKGHTVVRSSSLVPHDDPTLLFTNAGMNQFKDVFLGFDKRPYSRATTAQKCVRAGGKHNDLENVGYTARHHTFFEMMGNFSFGDYFKRDAIHFAWEFLTSPEWLNIPKDKLLATVYAEDDEAYNIWLNEIGMPSERIVRIGDNKGAKYASDNFWQMGDTGPCGPCSEIFYDHGEEIWGGIPGSPEEDGDRWIEIWNCVFMQFNRDEQGNMNPLPKPSVDTGMGLERMAAVMQHVHSNYEIDLFQDLLKAVARETGAPFSMEEPSLKVIADHIRSCSFLIADGVLPSNEGRGYVLRRIIRRAVRHGYKLGQSKPFFHKLVADLVKEMGDAYPELKEKQVQIEEALKNEESRFAQTLETGMALLENALAKGGKTLDGEIIFKLYDTYGFPYDLTADICRERNIELDEAGFEREMEAQRARARAAQSFKANAQLPYDGQDTEFKGYSERQTESKVLALYKDGEQVDELNEGDSGAVVIDFTPFYAESGGQVGDVGYIFSGENRFEVRDTQKIKAAVFGQFGVQTSGRLKVGDSVTAKVDDEIRNANMRNHSATHLMHKALRDVLGRHVEQKGSLVTAESTRFDISHPQAVTAEEIAEVERRVNEAVLANVAVNAAIMSMEDAQKTGAMMLFGEKYGDEVRVLQMGGFSTELCGGTHVSRTGDIGLFKIISEGGIAAGVRRIEAITGLNALKWAQEQERLVKDIIAETKAQTEKDVLAKIQAGAAHAKALEKELARAKAELAVHAGAKLLDDAKDLGAAKLVAAQIEADAAALREIVTDLTGKSDNAVILLAAVNDGKVSLCAGVSKPLTGKVKAGDLVKFAAEQVGGKGGGRPDLAQAGGTDAGKLPEMLVSVESWLCQKLS
>NZ_NVYQ01000131.1|WP_002223553.1|3157_4288_-|polyamine-ABC-transporter-substrate-binding-protein
MTKHLPLAVLTALLLAACGGSDKPPAEKPAPAENQNVLKIYNWSEYVDPETVADFEKKNGIKVTYDVYDSDETLESKVLTGKSGYDIVAPSNAFVGRQIKAGAYQKIDKSLIPNYKHLNPEMMRLMDGVDPGHEYAVPFYWGTNTFAINTERVKKALGTDKLPDNQWDLVFDPEYTSKLKQCGISYLDSAAEIYPMVLNYLGKNPNSSNTEDIREATALLKKNRPNIKRFTSSGFIDDLARGDTCVTIGFGGDLNIAKRRAEEAGGKEKIRVMMPKEGVGIWVDSFVIPKDAKNVANAHKYINDFLDPEVSAKNGNFVTYAPSSKPARELMEDEFKNDNTIFPTEEDLKNSFIMVPIQPAALKFMVRQWQDVKAGK
>NZ_NVYQ01000131.1|WP_014580992.1|2214_3117_+|DMT-family-transporter
MDTAKKDILGSGWMLVAAVCFTIMNVLIKEASAKFALGSGELVFWRMLFSTVALGAAAVLRRDTFRTPHWKNHLNRSMVGTGAMLLLFYAVTHLPLATGVTLSYTSSIFLAVFSFLILKERISVYTQAVLLLGFAGVVLLLNPSFRSGQETAALAGLAGGAMSGWAYLKVRELSLAGEPGWRVVFYLSVTGVAMSSVWATLTGWHTLSFPSAVYLSCIGVSALIAQLSMTRAYKVGDKFTVASLSYMTVVFSALSAAFFLGEELFWQEILGMCIIILSGILSSIRPTAFKQRLQSLFRQR
>NZ_NVYQ01000131.1|WP_002231880.1|1579_2068_-|lipoprotein
MKKYLIPLSIAAVLSGCQSIYVPTLTEIPVNPINTVKTEAPAKGFRLASSHWTDVAKISDEATRLGYQVGIGKMTKVQAAQYLNNFRKRLVGRNAVDDSMYEIYLRSAIDSQRGAINTEQSKLYIQNALRGWQQRWKNMDVKPNNPAFTNFLMEVMKMQPLK
>NZ_NVYQ01000131.1|WP_002216775.1|612_1518_+|cupin-domain-containing-protein
MDILDKLVDFAQLTGSVDVQCLLGGQWSVRHETLQREGLVHIVTSGNGYLCIDGETSPRPVSTGDIVFFPRGLGHVLSHDGKCGESLQPDMRQHGAFTVKQCGNGQDMSLFCARFRYDTHADLMNGLPETVFLNIAHPSLQYVVSMLQLESKKPLTGTVSMVNALSSVLLVLILRAYLEQDKDVELSGVLKGWQDKRLGHLIQKVIDKPEDEWNVDKMVAAANMSRAQLMRRFKSRVGLSPHAFVNHIRLQKGALLLKKNPDSVLSVALSVGFQSETHFGKAFKRQYHVSPGQYRKEGGQK
>NZ_NVYQ01000131.1|WP_002212800.1|148_484_-|carboxymuconolactone-decarboxylase-family-protein
MFKDWKEHTALVKKSFGELGKAHPKMLQAYGALEQAAAAEALDAKTRELIAIAVAITTRCESCISVHAAAAAKAGATDSEIAGALATAIALNAGAAYTYALRALEAVETQK
>NZ_NVYQ01000131.1|WP_002235076.1|12029_12713_-|2,3-diphosphoglycerate-dependent-phosphoglycerate-mutase
MELVFIRHGQSEWNAKNLFTGWRDVKLSEQGLAEAAAAGKKLKENGYEFDIAFTSVLTRAIKTCNIVLEESDQLFVPQIKTWRLNERHYGQLQGLDKKQTAEKYGDEQVRIWRRSYDTLPPLLDKDDEFSAHKDRRYAHLPADVVPDGENLKVTLERVLPFWEDQIAPAILSGKRVLVAAHGNSLRALAKHIEGISDEDIMGLEIPTGQPLVYKLDDNLKVIEKFYL
>NZ_NVYQ01000131.1|WP_033910281.1|13009_15313_+|DNA-topoisomerase-IV-subunit-A
MNMQPHAPHTDSNTLMLGQYAERAYLEYAMSVVKGRALPEVSDGQKPVQRRILFAMRDMGLTAGAKPVKSARVVGEILGKYHPHGDSSAYEAMVRMAQDFTLRYPLIDGIGNFGSRDGDGAAAMRYTEARLTPIAELLLSEINQGTVDFVPNYDGAFDEPLHLPARLPMVLLNGASGIAVGMATEIPSHNLNEVTQAAIALLKKPTLETADLMQYIPAPDFAGGGQIITPADELRRIYETGKGSVRVRARYEIEKLARGQWRVIVTELPPNANSAKILAEIEEQTNPKPKAGKKQLNQDQLNTKKLMLDLIDRVRDESDGEHPVRLVFEPKSSRIDTDTFINTLMAQTSLEGNVSMNLVMMGLDNRPAQKNLKTILQEWLDFRTVTVTRRLKFRLNQVEKRLHILEGRLKVFLHIDEVIKVIRESDDPKADLMAAFGLTEIQAEDILEIRLRQLARLEGFKLEKELNELREEQGRLNILLGDENEKRKLIIKEMQADMKQYGDARRTLVEEAGRAVLTQTTADEPITLILSEKGWIRSRAGHNLDLSQTAFKEGDRLKQTLEGRTVLPVVILDSLGRTYTLDAAEIPGGRGDGVPVSSLIELQNGAKPVAMLTGLPEQHYLLSSSGGYGFIAKLADMVGRVKAGKVVMTTDSGETVLPPIAVYASSFINPDCKIIAATSQNRALAFPIGELKIMAKGKGLQIIGLNAGESLTHTAVSSEPEILIESEGRRGAAHKDRIPVSLLEAKRGKKGKLLPISGSLKQLSSPK
>NZ_NVYQ01000131.1|WP_117375339.1|15333_16851_+|sensor-histidine-kinase
MVISNPRELEKLKDRIPNLINIIRVAIVFPLMIMHILGLETGSRANLHASWTAWAFYVWLAIACWLIFFSIIHPHWQWQALRIPSFSAVADITMIGVLTYLFGGIDSGFGILILPFVVCSCLLSYGRYPLLYSSYAAILLIFNAIADGDIGKYPLISDARTASATFILVAASYLSAIFTSLSVRYIDRAGKLAHENHAAYRRIRGLNQTVLNRVQEAVVVINVEHQTILFNKKAKDLLPMLEIGQHTALFDPITVLWDKASSRTFERNIDTPGLNAGIRAVPVNKGPDKLLILYIRPQSEIQAEALSVKLAALGQLTANLAHEIRNPMSAIRHANDLLRENMEAGAADPFNAKLCKIIDGNVCRIDKMLEDISSLNKRNKTERETIGLIPFWEEFKQEFLLGHPDAAGCIRLDMQGNHPTAYFDPAHLRQIMWNLANNAWRHSRKQPGSISVTIRPAQKNTVCILFADRPKCRNTCSNPFTPRRKTAPASGCMSPANWRTPISAI
>NZ_NVYQ01000131.1|WP_002212784.1|16902_17370_+|response-regulator
MTELQHPVLVVDDETDILDLMEMTLMKMGLRVHTASGVAEAKNKLDSQRYSLVLTDMRMPDGSGLEVVQHINSRLLDTPVAVITAFGNADQAQEALRCGAFDPDTMQIQDYLDQIERDIIEQTLKQTEGNRTQAAKRLGISFRSMRYRMERLNIG
>NZ_NVYQ01000131.1|WP_101116182.1|17473_18226_+|class-I-SAM-dependent-methyltransferase
MTDILIDNTATETVRTLIRAFPLVPVSQPPEQGSYLLTEHDTVSLRLVGEKSSVIVDFASGAAQYRRTKGGGELIAKAVNHTAKPTVWDATAGLGRDSFVLASLGLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVQTQGKPDIVYLDPMYPERRKSAAVKKEMTYFHRLVGEAQDEAALLHTARQTAKKRVVVKRPRLGEHLAGQAPAYQYTGKSTRFDVYLPYGTDKG
>NZ_NVYQ01000131.1|WP_002212781.1|19262_19469_-|DUF2788-domain-containing-protein
MDEAVFADWALKICLTGLIIFLGFIVWNLGKESKAGKFGIAILFLVLGLGVFGFVFKELLIKFLVLPK
>NZ_NVYQ01000131.1|WP_025459910.1|19555_20725_-|O-succinylhomoserine-sulfhydrylase
MSKKLHPQTLAIRGGKEQTGYREHNQALFLTSSFMWDNAQHAADLFSKKIKGFTYTRTANPTTAAFEKRIAALEGAERAVATSTGMSAIQAAFFTFLQAGDHVISSRSLFGTTVGFINNIVTKFGIEVSHVSPTDINEWKAAVKANTKLLFLETPSNPLGEVADLEALAELAHGIGAILVVDNSLLSPIGSQPLKHGADISVSSATKAIDGHGRVMGGVLAGSEELMAQAAVYCNSCGLAMSPFNAWQLLSGVETLSLRMEKQFDNALKIAQWLQAQPQVQAVYYTGLPDHPQAELIRKQQNGGGIVIGFEVADQAAAWKVVDGVELFSRTANLGDVRSTITHPWTTTHGRMQPEEKLAANIRPGLVRLSVGLEYVGDLVDDLKQALAR
>NZ_NVYQ01000131.1|WP_002212778.1|21022_21784_-|hypothetical-protein
MDANKEPNWEKRLENLRQTRRMKAVPTYAPLSRPSETGTDAPVPKLDDESRARVLKAYLKKWQEEHNAAVADCGEEVETDPMIVLQENWLNAQASLQMSVSEKHIESRRRILFDAKKDSAEFETGQIEGGENADAAESGTAADGVAENGEGGAEEALMPVQINILNPKAVNRREVFCLSEQELTERLIKRLRPHLTDTVNGIIRTAVQKQMAVFTYQLQQMLHEQAGAVVEDVLEHDVRKILNDIKYELKYKR
>NZ_NVYQ01000131.1|WP_002218963.1|21883_22135_+|hypothetical-protein
MGSIEQRLEYLEEANDVLRMQNHVLSTAFKALIRALPAETAEIAVESIQLAFEDALAELSYEDSPHTDLFHDVTYAFFREKER
>NZ_NVYQ01000131.1|WP_002226177.1|22186_22993_+|basic-amino-acid-ABC-transporter-substrate-binding-protein
MNMKKWIAAALACSALALSACGGQGKDAAAPAANPDKVYRVASNAEFAPFESLDSKGNVEGFDVDLMNAMAKAGNFKIEFKHQPWDSLFPALNNGDADVVMSGVTITDDRKQSMDFSDPYFEITQVVLVPKGKKISSSDDLKNMNKVGVVTGYTGDFSVSKLLGNDNPKIARFENVPLIIKELENGGLDSVVSDSAVIANYVKNNPTKGMDFVTLPDFTTEHYGIAVRKGDEATVKMLNDALEKVRESGEYDKIYAKYFAKEDGQAAK

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Crispr_ID: NZ_NVYQ01000131_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_NVYQ01000131_2

26485-26620

Orphan

Consensus_repeat	Method
TTTAGAGGTTCTAGATTCCCGTTTTCACGGGAATGACGAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_NVYQ01000131_2

>merge|NZ_NVYQ01000131|2|26485-26620|CRISPRCasFinder
TTTAGAGGTTCTAGATTCCCGTTTTCACGGGAATGACGAAGAGTTGCGGGAATCTAGACCATTGGAAAGCGGCAATATTCAAAGGTTAGCTGAAGCTTTAGAGGTTCTAGATTCCCGTTTCCACGGGAATGACGAA

>NZ_NVYQ01000131|2|2|26485-26620|CRISPRCasFinder
TTTAGAGGTTCTAGATTCCCGTTTTCACGGGAATGACGAA	GAGTTGCGGGAATCTAGACCATTGGAAAGCGGCAATATTCAAAGGTTAGCTGAAGC
TTTAGAGGTTCTAGATTCCCGTTTCCACGGGAATGACGAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_NVYQ01000131.1\|WP_002218960.1\|23299_24823_+\|fumarate-hydratase	unknown	unknown	gnl\|CDD\|224862
NZ_NVYQ01000131.1\|WP_002226177.1\|22186_22993_+\|basic-amino-acid-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270342
NZ_NVYQ01000131.1\|WP_002218963.1\|21883_22135_+\|hypothetical-protein	unknown	unknown	unknown
NZ_NVYQ01000131.1\|WP_117375339.1\|15333_16851_+\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|236901
NZ_NVYQ01000131.1\|WP_002212781.1\|19262_19469_-\|DUF2788-domain-containing-protein	unknown	unknown	gnl\|CDD\|378526
NZ_NVYQ01000131.1\|WP_025459910.1\|19555_20725_-\|O-succinylhomoserine-sulfhydrylase	unknown	unknown	gnl\|CDD\|188131
NZ_NVYQ01000131.1\|WP_002212778.1\|21022_21784_-\|hypothetical-protein	unknown	unknown	unknown
NZ_NVYQ01000131.1\|WP_101116182.1\|17473_18226_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|377360
NZ_NVYQ01000131.1\|WP_002216751.1\|24920_26333_+\|Trk-system-potassium-transporter-TrkA	unknown	unknown	gnl\|CDD\|236541
NZ_NVYQ01000131.1\|WP_002212784.1\|16902_17370_+\|response-regulator	unknown	unknown	gnl\|CDD\|381153

Protein	Function_ID	Function_description	E-value
NZ_NVYQ01000131.1\|WP_002218960.1\|23299_24823_+\|fumarate-hydratase	gnl\|CDD\|224862	COG1951, TtdA, Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain [Energy production and conversion].	4.56294e-151
NZ_NVYQ01000131.1\|WP_002212784.1\|16902_17370_+\|response-regulator	gnl\|CDD\|381153	cd19926, REC_PilR, phosphoacceptor receiver (REC) domain of type 4 fimbriae expression regulatory protein PilR and similar proteins. Pseudomonas aeruginosa PilR is the response regulator of the PilS/PilR two-component regulatory system (PilSR TCS) that acts in conjunction with sigma-54 to regulate the expression of type 4 pilus (T4P) major subunit PilA. In addition, the PilSR TCS regulates flagellum-dependent swimming motility and pilus-dependent twitching motility. PilR contains an N-terminal REC domain, a central sigma-54 interaction domain, and a C-terminal Fis-type helix-turn-helix DNA-binding domain. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	2.12443e-55
NZ_NVYQ01000131.1\|WP_117375339.1\|15333_16851_+\|sensor-histidine-kinase	gnl\|CDD\|236901	PRK11360, PRK11360, two-component system sensor histidine kinase AtoS.	1.41965e-13
NZ_NVYQ01000131.1\|WP_002212781.1\|19262_19469_-\|DUF2788-domain-containing-protein	gnl\|CDD\|378526	pfam10981, DUF2788, Protein of unknown function (DUF2788). This bacterial family of proteins have no known function.	6.34727e-11
NZ_NVYQ01000131.1\|WP_025459910.1\|19555_20725_-\|O-succinylhomoserine-sulfhydrylase	gnl\|CDD\|188131	TIGR01325, O_suc_HS_sulf, O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis. [Amino acid biosynthesis, Aspartate family].	0
NZ_NVYQ01000131.1\|WP_002226177.1\|22186_22993_+\|basic-amino-acid-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270342	cd13624, PBP2_Arg_Lys_His, Substrate binding domain of the arginine-, lysine-, histidine-binding protein ArtJ; the type 2 periplasmic binding protein fold. This group includes the periplasmic substrate-binding protein ArtJ of the ATP-binding cassette (ABC) transport system from the thermophilic bacterium Geobacillus stearothermophilus, which is specific for arginine, lysine, and histidine. ArtJ belongs to the type 2 periplasmic-binding fold protein (PBP2) superfamily, whose members are involved in chemotaxis and uptake of nutrients and other small molecules from the extracellular space as a primary receptor. PBP2 typically comprises of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two receptor cytoplasmically-located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	3.37988e-101
NZ_NVYQ01000131.1\|WP_101116182.1\|17473_18226_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|377360	pfam04445, SAM_MT, Putative SAM-dependent methyltransferase. This is a family of putative SAM-dependent methyltransferases.	1.65402e-114
NZ_NVYQ01000131.1\|WP_002216751.1\|24920_26333_+\|Trk-system-potassium-transporter-TrkA	gnl\|CDD\|236541	PRK09496, trkA, Trk system potassium transporter TrkA.	0

>NZ_NVYQ01000131.1|WP_002216751.1|24920_26333_+|Trk-system-potassium-transporter-TrkA
MKILILGNGQVGSTVAQNLAAIPNNDVTVIDIDEKALQETGSRLDVQTVFGNGASPFTLERAGAEDADLLLALSRSDETNIVACKVAADLFNIPGRIARVRSSEYLEYLSPKLENNENGSLSIFGITETISPEQLVTEQLAGLIDCPGALQVLRFADDRVRMVIIQARRGGLLVGRSIADIAQDLPDGADCQICAVYRNNRLIVPAPQTVIIEGDEILFAAAAENIGAVIPELRPKETSTRRIMIAGGGNIGYRLAKQLEHAYNVKIIECRPRRAEWIAENLDNTLVLQGSATDETLLDNEYIDEIDVFCALTNDDESNIMSALLAKNLGAKRVIGIVNRSSYVDLLEGNKIDIVVSPHLITIGSILAHIRRGDIVAVHPIRRGTAEAIEVVAHGDKKTSAIIGRRISGIKWPEGCHIAAVVRAETGETIMGHHTETVIQDGDHIIFFVSRRRILNELEKLIQVKMGFFG
>NZ_NVYQ01000131.1|WP_002218960.1|23299_24823_+|fumarate-hydratase
MTVIKQEDFIQSICDAFQFISYYHPKDYIDALYKAWQKEENPAAKDAMTQILVNSRMCAENNRPICQDTGIATVFLKVGMDVQWDADMSVEEMVNEGVRRAYTWEGNTLRASVLADPAGKRQNTKDNTPAVIHMSIVPGDKVEVTCAAKGGGSENKSKLAMLNPSDNIVDWVLKTIPTMGAGWCPPGILGIGIGGTPEKAVLMAKESLMSHIDIQELQEKAASGAELSTTEALRLELFEKVNALGIGAQGLGGLTTVLDVKILDYPTHAASKPIAMIPNCAATRHVEFELDGSGPVELTPPRVEDWPDLTYSPDNGKRVDVDKLTKEEVASWKTGDVLLLNGKILTGRDAAHKRLVDMLNKGEELPVDFTNRLIYYVGPVDPVGDEVVGPAGPTTATRMDKFTRQMLEQTGLLGMIGKSERGAAACEAIADNKAVYLMAVGGAAYLVAKAIKSSKVLAFPELGMEAIYEFEVKDMPVTVAVDSKGESIHATAPPQWQAKIGIIPVKS
>NZ_NVYQ01000131.1|WP_002226177.1|22186_22993_+|basic-amino-acid-ABC-transporter-substrate-binding-protein
MNMKKWIAAALACSALALSACGGQGKDAAAPAANPDKVYRVASNAEFAPFESLDSKGNVEGFDVDLMNAMAKAGNFKIEFKHQPWDSLFPALNNGDADVVMSGVTITDDRKQSMDFSDPYFEITQVVLVPKGKKISSSDDLKNMNKVGVVTGYTGDFSVSKLLGNDNPKIARFENVPLIIKELENGGLDSVVSDSAVIANYVKNNPTKGMDFVTLPDFTTEHYGIAVRKGDEATVKMLNDALEKVRESGEYDKIYAKYFAKEDGQAAK
>NZ_NVYQ01000131.1|WP_002218963.1|21883_22135_+|hypothetical-protein
MGSIEQRLEYLEEANDVLRMQNHVLSTAFKALIRALPAETAEIAVESIQLAFEDALAELSYEDSPHTDLFHDVTYAFFREKER
>NZ_NVYQ01000131.1|WP_002212778.1|21022_21784_-|hypothetical-protein
MDANKEPNWEKRLENLRQTRRMKAVPTYAPLSRPSETGTDAPVPKLDDESRARVLKAYLKKWQEEHNAAVADCGEEVETDPMIVLQENWLNAQASLQMSVSEKHIESRRRILFDAKKDSAEFETGQIEGGENADAAESGTAADGVAENGEGGAEEALMPVQINILNPKAVNRREVFCLSEQELTERLIKRLRPHLTDTVNGIIRTAVQKQMAVFTYQLQQMLHEQAGAVVEDVLEHDVRKILNDIKYELKYKR
>NZ_NVYQ01000131.1|WP_025459910.1|19555_20725_-|O-succinylhomoserine-sulfhydrylase
MSKKLHPQTLAIRGGKEQTGYREHNQALFLTSSFMWDNAQHAADLFSKKIKGFTYTRTANPTTAAFEKRIAALEGAERAVATSTGMSAIQAAFFTFLQAGDHVISSRSLFGTTVGFINNIVTKFGIEVSHVSPTDINEWKAAVKANTKLLFLETPSNPLGEVADLEALAELAHGIGAILVVDNSLLSPIGSQPLKHGADISVSSATKAIDGHGRVMGGVLAGSEELMAQAAVYCNSCGLAMSPFNAWQLLSGVETLSLRMEKQFDNALKIAQWLQAQPQVQAVYYTGLPDHPQAELIRKQQNGGGIVIGFEVADQAAAWKVVDGVELFSRTANLGDVRSTITHPWTTTHGRMQPEEKLAANIRPGLVRLSVGLEYVGDLVDDLKQALAR
>NZ_NVYQ01000131.1|WP_002212781.1|19262_19469_-|DUF2788-domain-containing-protein
MDEAVFADWALKICLTGLIIFLGFIVWNLGKESKAGKFGIAILFLVLGLGVFGFVFKELLIKFLVLPK
>NZ_NVYQ01000131.1|WP_101116182.1|17473_18226_+|class-I-SAM-dependent-methyltransferase
MTDILIDNTATETVRTLIRAFPLVPVSQPPEQGSYLLTEHDTVSLRLVGEKSSVIVDFASGAAQYRRTKGGGELIAKAVNHTAKPTVWDATAGLGRDSFVLASLGLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVQTQGKPDIVYLDPMYPERRKSAAVKKEMTYFHRLVGEAQDEAALLHTARQTAKKRVVVKRPRLGEHLAGQAPAYQYTGKSTRFDVYLPYGTDKG
>NZ_NVYQ01000131.1|WP_002212784.1|16902_17370_+|response-regulator
MTELQHPVLVVDDETDILDLMEMTLMKMGLRVHTASGVAEAKNKLDSQRYSLVLTDMRMPDGSGLEVVQHINSRLLDTPVAVITAFGNADQAQEALRCGAFDPDTMQIQDYLDQIERDIIEQTLKQTEGNRTQAAKRLGISFRSMRYRMERLNIG
>NZ_NVYQ01000131.1|WP_117375339.1|15333_16851_+|sensor-histidine-kinase
MVISNPRELEKLKDRIPNLINIIRVAIVFPLMIMHILGLETGSRANLHASWTAWAFYVWLAIACWLIFFSIIHPHWQWQALRIPSFSAVADITMIGVLTYLFGGIDSGFGILILPFVVCSCLLSYGRYPLLYSSYAAILLIFNAIADGDIGKYPLISDARTASATFILVAASYLSAIFTSLSVRYIDRAGKLAHENHAAYRRIRGLNQTVLNRVQEAVVVINVEHQTILFNKKAKDLLPMLEIGQHTALFDPITVLWDKASSRTFERNIDTPGLNAGIRAVPVNKGPDKLLILYIRPQSEIQAEALSVKLAALGQLTANLAHEIRNPMSAIRHANDLLRENMEAGAADPFNAKLCKIIDGNVCRIDKMLEDISSLNKRNKTERETIGLIPFWEEFKQEFLLGHPDAAGCIRLDMQGNHPTAYFDPAHLRQIMWNLANNAWRHSRKQPGSISVTIRPAQKNTVCILFADRPKCRNTCSNPFTPRRKTAPASGCMSPANWRTPISAI

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

21. NZ_NVYQ01000193

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

22. NZ_NVYQ01000019

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

23. NZ_NVYQ01000042

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

24. NZ_NVYQ01000214

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

25. NZ_NVYQ01000224

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

26. NZ_NVYQ01000209

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

27. NZ_NVYQ01000165

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CRISPR-Cas detection and classification

Crispr_ID: NZ_NVYQ01000165_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_NVYQ01000165_1

341-447

Orphan

I-E

Consensus_repeat	Method
GATTCCCGCCTGCGCGGGAATGACGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_NVYQ01000165_1

>merge|NZ_NVYQ01000165|1|341-447|CRISPRCasFinder
CATTCCCGCGCAGGCGGGAATCTAGGATGCGGAATCTAGAGAAACCGTTTATCCGATAAGTTTCCGTTCCGACAGGTCTGGATTCCCGCCTGCGCGGGAATGACGGA

>NZ_NVYQ01000165|1|1|341-447|CRISPRCasFinder
CATTCCCGCGCAGGCGGGAATCTAGG	ATGCGGAATCTAGAGAAACCGTTTATCCGATAAGTTTCCGTTCCGACAGGTCTG
GATTCCCGCCTGCGCGGGAATGACGGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_NVYQ01000165.1\|WP_002221507.1\|3347_3788_+\|MarR-family-adhesin-repressor-NadR	unknown	unknown	gnl\|CDD\|188209
NZ_NVYQ01000165.1\|WP_117366070.1\|5344_5776_-\|EamA-family-transporter	unknown	unknown	gnl\|CDD\|225308
NZ_NVYQ01000165.1\|WP_002221505.1\|4418_5114_+\|nucleotidyltransferase-family-protein	unknown	unknown	gnl\|CDD\|133044
NZ_NVYQ01000165.1\|WP_061384619.1\|2495_3005_+\|protein-disulfide-oxidoreductase	unknown	unknown	gnl\|CDD\|239309
NZ_NVYQ01000165.1\|WP_002221506.1\|3902_4403_+\|4-hydroxyphenylacetate-3-monooxygenase,-reductase-component	unknown	unknown	gnl\|CDD\|131349
NZ_NVYQ01000165.1\|WP_025460218.1\|7741_8833_+\|redox-regulated-ATPase-YchF	unknown	unknown	gnl\|CDD\|236583
NZ_NVYQ01000165.1\|WP_025460689.1\|5950_7627_+\|formate--tetrahydrofolate-ligase	unknown	unknown	gnl\|CDD\|376511
NZ_NVYQ01000165.1\|WP_002248129.1\|1046_2126_-\|iron-sulfur-cluster-carrier-protein-ApbC	unknown	unknown	gnl\|CDD\|378455
NZ_NVYQ01000165.1\|WP_002224071.1\|11140_12436_+\|tyrosine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235645
NZ_NVYQ01000165.1\|WP_101126240.1\|9207_11079_+\|acyltransferase	unknown	unknown	gnl\|CDD\|224748

Protein	Function_ID	Function_description	E-value
NZ_NVYQ01000165.1\|WP_002221507.1\|3347_3788_+\|MarR-family-adhesin-repressor-NadR	gnl\|CDD\|188209	TIGR02337, Homoprotocatechuate_degradative_operon_repressor., homoprotocatechuate degradation operon regulator, HpaR. This Helix-Turn-Helix transcriptional regulator is a member of the MarR family (pfam01047) and is found in association with operons for the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate.	7.34663e-62
NZ_NVYQ01000165.1\|WP_117366070.1\|5344_5776_-\|EamA-family-transporter	gnl\|CDD\|225308	COG2510, COG2510, Predicted membrane protein [Function unknown].	2.6483e-53
NZ_NVYQ01000165.1\|WP_002221505.1\|4418_5114_+\|nucleotidyltransferase-family-protein	gnl\|CDD\|133044	cd06422, NTP_transferase_like_1, NTP_transferase_like_1 is a member of the nucleotidyl transferase family. This is a subfamily of nucleotidyl transferases. Nucleotidyl transferases transfer nucleotides onto phosphosugars. The activated sugars are precursors for synthesis of lipopolysaccharide, glycolipids and polysaccharides. Other subfamilies of nucleotidyl transferases include Alpha-D-Glucose-1-Phosphate Cytidylyltransferase, Mannose-1-phosphate guanyltransferase, and Glucose-1-phosphate thymidylyltransferase.	8.54924e-99
NZ_NVYQ01000165.1\|WP_061384619.1\|2495_3005_+\|protein-disulfide-oxidoreductase	gnl\|CDD\|239309	cd03011, TlpA_like_ScsD_MtbDsbE, TlpA-like family, suppressor for copper sensitivity D protein (ScsD) and actinobacterial DsbE homolog subfamily; composed of ScsD, the DsbE homolog of Mycobacterium tuberculosis (MtbDsbE) and similar proteins, all containing a redox-active CXXC motif. The Salmonella typhimurium ScsD is a thioredoxin-like protein which confers copper tolerance to copper-sensitive mutants of E. coli. MtbDsbE has been characterized as an oxidase in vitro, catalyzing the disulfide bond formation of substrates like hirudin. The reduced form of MtbDsbE is more stable than its oxidized form, consistent with an oxidase function. This is in contrast to the function of DsbE from gram-negative bacteria which is a specific reductase of apocytochrome c.	7.90301e-52
NZ_NVYQ01000165.1\|WP_002221506.1\|3902_4403_+\|4-hydroxyphenylacetate-3-monooxygenase,-reductase-component	gnl\|CDD\|131349	TIGR02296, HpaC, 4-hydroxyphenylacetate 3-monooxygenase, reductase component. This model identifies the reductase component (HpaC) of 4-hydroxyphenylacetate 3-monooxygenase. This enzyme catalyzes the first step (hydroxylation at the 3-position) in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. 4-hydroxyphenylacetate arises from the degradation of tyrosine. These reductases catalyze the reduction of free flavins by NADPH. The flavin is then utilized by the large subunit of the monooxygenase.	3.21981e-97
NZ_NVYQ01000165.1\|WP_025460218.1\|7741_8833_+\|redox-regulated-ATPase-YchF	gnl\|CDD\|236583	PRK09601, PRK09601, redox-regulated ATPase YchF.	0
NZ_NVYQ01000165.1\|WP_025460689.1\|5950_7627_+\|formate--tetrahydrofolate-ligase	gnl\|CDD\|376511	pfam01268, FTHFS, Formate--tetrahydrofolate ligase.	0
NZ_NVYQ01000165.1\|WP_002248129.1\|1046_2126_-\|iron-sulfur-cluster-carrier-protein-ApbC	gnl\|CDD\|378455	pfam10609, ParA, NUBPL iron-transfer P-loop NTPase. This family contains ATPases involved in plasmid partitioning. It also contains the cytosolic Fe-S cluster assembling factor NBP35 which is required for biogenesis and export of both ribosomal subunits.	3.38304e-144
NZ_NVYQ01000165.1\|WP_002224071.1\|11140_12436_+\|tyrosine--tRNA-ligase	gnl\|CDD\|235645	PRK05912, PRK05912, tyrosyl-tRNA synthetase; Validated.	0
NZ_NVYQ01000165.1\|WP_101126240.1\|9207_11079_+\|acyltransferase	gnl\|CDD\|224748	COG1835, COG1835, Predicted acyltransferases [Lipid metabolism].	5.24746e-75

>NZ_NVYQ01000165.1|WP_002248129.1|1046_2126_-|iron-sulfur-cluster-carrier-protein-ApbC
MNIQNIRTLLDTVAVPNTARTLGGEKAVRSVEQRSDGIHIALHFGFPVAHIASETADRIQEILMPLTGDTHIHLSMDTEIGTHKVQPGVTTIKGVKNIIAVASGKGGVGKSTTTANLAAAMARMGARVGVLDADLYGPSQPTMLGVDDRKPDQKNQKLIPVESSNGIQVMSIGFLVDTDQAVVWRGPMVSQALQQLMFQSEWDEVDYLFIDLPPGTGDIQLTLSQRIPVTGSVIVTTPQDIALIDARKAVDMFRKVNIPILGVLENMSVHICSNCGHSEALFGTDGGKDLAARLNVPLLGQLPLSLPVREAMDGGTPAQLFDEHPAIARIYTDAAFQIALGIADKGKDFSSRFPKIVVE
>NZ_NVYQ01000165.1|WP_061384619.1|2495_3005_+|protein-disulfide-oxidoreductase
MKKKLLSGIKFAVQTALVFLLVSLFLDWIRKPDEPAGAAGRPLTLLSGQRLTLGQFSRDKAVLVYFWGSWCGVCRYQSPIIDDLAADGVPVVGVAVRSGSSAEVAAYMAKRGLGFPTANDEDGDLARSWRIVATPAVVLVKNGKMVHYTTGISSYWGLRARIFQADVFG
>NZ_NVYQ01000165.1|WP_002221507.1|3347_3788_+|MarR-family-adhesin-repressor-NadR
MPTQSKHASINISLIQAREALMTQFRPILNQANITDQQWRIIRLLAENGTLDFQDLANQACILRPSLTGILTRLEKAGLVVRLKPSNDQRRVFLKLTAEGEKLYEEIGEEVDERYDAIEEVLGREKMLLLKDLLAELAKIEDALNS
>NZ_NVYQ01000165.1|WP_002221506.1|3902_4403_+|4-hydroxyphenylacetate-3-monooxygenase,-reductase-component
MADLQKTFQTSFRDAMASCAAGVHVITTDGAAGRYGITMTAVTPVTDEPPTVMLCINRKARIIPILSENGSLCINTLADEHQDVAEHFAGLTGLSPEERFAYHIWHRGKTGQLEIEGALAHLHGHIVGKHEIGTHFVFYVRLDEIKNCGCKRPALLYFRRQFRFLD
>NZ_NVYQ01000165.1|WP_002221505.1|4418_5114_+|nucleotidyltransferase-family-protein
MKAMILAAGRGERMRPLTDTTPKPLLDVAGKPLIGWHLCRLKQAGFTEIVINHAWLGRQIEDALGDGSAYGVNIAYSPEPAGGLETAGGIAQALPLLGGQPFLVVNGDVLTDIDFTAAFQAASSLPEHISAHLWLVENPPHNPDGDFSLLPDGSVRPEVNGGNGLTFSGVGIYRPEMFDGIEAGSVAKLAPVLRGEMRQNRVSGQKHTGLWLDVGTVCRLKEAQALAGAWK
>NZ_NVYQ01000165.1|WP_117366070.1|5344_5776_-|EamA-family-transporter
MSSNAWLFWALASAGFASLTAVFAKMGLQGIDSDFATFIHTLVILAALVLFLTYTGKWQGVNGFTGRNWTFLILSGLATGASWLAYFKALQLGNASQVAPIDKFSLVLVALMAVVFLDERPNTQEWIGLGLVTAGVLVLALKR
>NZ_NVYQ01000165.1|WP_025460689.1|5950_7627_+|formate--tetrahydrofolate-ligase
MSFKTDAEIAQSSTMRPIGEIAAKLGLNADNIEPYGHYKAKINPAEAFKLPQKQGRLILVTAINPTPAGEGKTTVTIGLADALRHIGKDAVIALREPSLGPVFGVKGGAAGGGYAQVLPMEDINLHFTGDFHAIGAANNLLAAMLDNHIYQGNELDIDPKRVLWRRVVDMNDRQLRNIIDGMGKPVDGVMRPDGFDITVASEVMAVFCLAKDISDLKERLGNILVAYAKDGSPVYAKDLKANGAMAALLKDAIKPNLVQTIEGTPAFVHGGPFANIAHGCNSVTATRLAKHLADYAVTEAGFGADLGAEKFCDIKCRLADLKPDAAVVVATVRALKYNGGVERANLGEENLDALEKGLPNLLKHISNLKNVFGLPVVVALNRFVSDSDAELAMIEKACAEHGVEVSLTEVWGKGGAGGADLARKVVNAIESQTNNFGFAYDVELGIKDKIRAIAQKVYGAEDVDFSAEASAEIASLEKLGLDKMPICMAKTQYSLSDNAKLLGCPEGFRITVRGITVSAGAGFIVALCGNMMKMPGLPKVPAAEKIDVDAEGVIHGLF
>NZ_NVYQ01000165.1|WP_025460218.1|7741_8833_+|redox-regulated-ATPase-YchF
MSLKCGIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGVVEVPDPRMAELAKIVNPQKMQPAIVEFVDIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDDNIVHVAGRVDPIADIETIGTELALADLASVEKAIVREEKRARSGDKDAQKLVDLCKKLLPHLDEGKPVRSFGLDAEERAMLKPLFLLTAKPAMYVGNVAEDGFENNPHLDRLKELAAKENAPIVAVCAAMESEIAELEDDEKAEFLAEMGLEEPGLNRLIRAGYDLLGLQTYFTAGVKEVRAWTIHKGDTAPQAAGVIHTDFERGFIRAQVISYDDFVSLGGEAKAKEAGKMRVEGKEYVVQDGDVMHFLFNV
>NZ_NVYQ01000165.1|WP_101126240.1|9207_11079_+|acyltransferase
MSQALPYRPDIDTLRAAAVLSVIVFHIEKNWLPGGFLGVDIFFVISGFLMTAILLREMSGGGGRFSLKAFYIRRIKRILPAFFAVLAATLIGGFFLFTKDDFFLLWKSALTALGFASNLYFARGKDYFAPAQEEKPLLHIWSLSVEEQFYFVFPILLLLVVRKSLRVQAGFLAALCALSLATSFIPSAFDKYYLPHLRACEMLVGSLTAVWMRCRQPAVGRRCAAAGALFAVCILSTCLFSYSEQTAYFPGPAALIPCLAVAALIYFNHYEHPLKKFFQWKITVAAGLISYSLYLWHWPILAFMRYIGPDNLPPYSPAAAIVLTLAFSLISYHCIEKPFKKWQGSFAQSVLWIYALPMLILGAGSFFAMRLPFMAQYDRLGLTRSNTSCHNNTGKQCLWGDTEKQPELLILGDSHADHYKTFFDAVGKKEKWSATMVSADACAYVEGYASRVFQNWAACRAVYRYAEEHLPRYSKVVLAMRWGSQMPENSRSLAYDAGFFQKFDRMLHKLSSEKQAVYLMADNLASSYNVQRAYILSSRIPGYRQTLRPDDESTLKANARIRELAAKYPNVYIIDAAAYIPADFQIGGLPVYSDTDHINPYGGTELAKRFSEKQRFLNTRHNH
>NZ_NVYQ01000165.1|WP_002224071.1|11140_12436_+|tyrosine--tRNA-ligase
MSVIQDLQSRDLIAQTTDIEALDALLNEQKIALYCGFDPTADSLHIGHLLPVLALRRFQQAGHTPIALVGGATGMIGDPSFKAAERSLNSAETVAGWVESIRSQLTPFLSFEGGNAAIMANNADWFGKMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRDGAGISFTEFAYSLLQGYDFAELNKRHGAVLEIGGSDQWGNITAGIDLTRRLYQKQVFGLTLPLVTKSDGTKFGKTEGGAVWLNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIDAIEAKDKASGSKPEAQRILAEEMTRLIHGEEALAAAQRISESLFAEDQSSLTESDFEQLALDGLPAFEVSDGINVVEALVKTGLASSNKEARGFVNSKAVLLNGKPAEANNPNHAAERPDDACLLNGEHKRFGKYTILRRGKRNHALLVWK

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Crispr_ID: NZ_NVYQ01000165_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_NVYQ01000165_2

683-850

Orphan

I-E

Consensus_repeat	Method
GATTCCCGCCTGCGCGGGAATGACGG	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_NVYQ01000165_2

>merge|NZ_NVYQ01000165|2|683-850|CRISPRCasFinder
GATTCCCGCCTACGCGGGAATGACGGGTCTTTTATAATCTTTGAATATTGCTGTTGTTCTAAGGTCTAGATTCCCGCCTGCGCGGGAATGACGGTTTAGAAGTTGCCCGAAACCTCAAAAAAAACCGAAACCGAACAAGCCGGATTCCCGCCTGCGCGGGAATGACGG

>NZ_NVYQ01000165|2|2|683-850|CRISPRCasFinder
GATTCCCGCCTACGCGGGAATGACGG	GTCTTTTATAATCTTTGAATATTGCTGTTGTTCTAAGGTCTA
GATTCCCGCCTGCGCGGGAATGACGG	TTTAGAAGTTGCCCGAAACCTCAAAAAAAACCGAAACCGAACAAGCCG
GATTCCCGCCTGCGCGGGAATGACGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_NVYQ01000165.1\|WP_002221507.1\|3347_3788_+\|MarR-family-adhesin-repressor-NadR	unknown	unknown	gnl\|CDD\|188209
NZ_NVYQ01000165.1\|WP_117366070.1\|5344_5776_-\|EamA-family-transporter	unknown	unknown	gnl\|CDD\|225308
NZ_NVYQ01000165.1\|WP_002221505.1\|4418_5114_+\|nucleotidyltransferase-family-protein	unknown	unknown	gnl\|CDD\|133044
NZ_NVYQ01000165.1\|WP_061384619.1\|2495_3005_+\|protein-disulfide-oxidoreductase	unknown	unknown	gnl\|CDD\|239309
NZ_NVYQ01000165.1\|WP_002221506.1\|3902_4403_+\|4-hydroxyphenylacetate-3-monooxygenase,-reductase-component	unknown	unknown	gnl\|CDD\|131349
NZ_NVYQ01000165.1\|WP_025460218.1\|7741_8833_+\|redox-regulated-ATPase-YchF	unknown	unknown	gnl\|CDD\|236583
NZ_NVYQ01000165.1\|WP_025460689.1\|5950_7627_+\|formate--tetrahydrofolate-ligase	unknown	unknown	gnl\|CDD\|376511
NZ_NVYQ01000165.1\|WP_002248129.1\|1046_2126_-\|iron-sulfur-cluster-carrier-protein-ApbC	unknown	unknown	gnl\|CDD\|378455
NZ_NVYQ01000165.1\|WP_002224071.1\|11140_12436_+\|tyrosine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235645
NZ_NVYQ01000165.1\|WP_101126240.1\|9207_11079_+\|acyltransferase	unknown	unknown	gnl\|CDD\|224748

Protein	Function_ID	Function_description	E-value
NZ_NVYQ01000165.1\|WP_002221507.1\|3347_3788_+\|MarR-family-adhesin-repressor-NadR	gnl\|CDD\|188209	TIGR02337, Homoprotocatechuate_degradative_operon_repressor., homoprotocatechuate degradation operon regulator, HpaR. This Helix-Turn-Helix transcriptional regulator is a member of the MarR family (pfam01047) and is found in association with operons for the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate.	7.34663e-62
NZ_NVYQ01000165.1\|WP_117366070.1\|5344_5776_-\|EamA-family-transporter	gnl\|CDD\|225308	COG2510, COG2510, Predicted membrane protein [Function unknown].	2.6483e-53
NZ_NVYQ01000165.1\|WP_002221505.1\|4418_5114_+\|nucleotidyltransferase-family-protein	gnl\|CDD\|133044	cd06422, NTP_transferase_like_1, NTP_transferase_like_1 is a member of the nucleotidyl transferase family. This is a subfamily of nucleotidyl transferases. Nucleotidyl transferases transfer nucleotides onto phosphosugars. The activated sugars are precursors for synthesis of lipopolysaccharide, glycolipids and polysaccharides. Other subfamilies of nucleotidyl transferases include Alpha-D-Glucose-1-Phosphate Cytidylyltransferase, Mannose-1-phosphate guanyltransferase, and Glucose-1-phosphate thymidylyltransferase.	8.54924e-99
NZ_NVYQ01000165.1\|WP_061384619.1\|2495_3005_+\|protein-disulfide-oxidoreductase	gnl\|CDD\|239309	cd03011, TlpA_like_ScsD_MtbDsbE, TlpA-like family, suppressor for copper sensitivity D protein (ScsD) and actinobacterial DsbE homolog subfamily; composed of ScsD, the DsbE homolog of Mycobacterium tuberculosis (MtbDsbE) and similar proteins, all containing a redox-active CXXC motif. The Salmonella typhimurium ScsD is a thioredoxin-like protein which confers copper tolerance to copper-sensitive mutants of E. coli. MtbDsbE has been characterized as an oxidase in vitro, catalyzing the disulfide bond formation of substrates like hirudin. The reduced form of MtbDsbE is more stable than its oxidized form, consistent with an oxidase function. This is in contrast to the function of DsbE from gram-negative bacteria which is a specific reductase of apocytochrome c.	7.90301e-52
NZ_NVYQ01000165.1\|WP_002221506.1\|3902_4403_+\|4-hydroxyphenylacetate-3-monooxygenase,-reductase-component	gnl\|CDD\|131349	TIGR02296, HpaC, 4-hydroxyphenylacetate 3-monooxygenase, reductase component. This model identifies the reductase component (HpaC) of 4-hydroxyphenylacetate 3-monooxygenase. This enzyme catalyzes the first step (hydroxylation at the 3-position) in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. 4-hydroxyphenylacetate arises from the degradation of tyrosine. These reductases catalyze the reduction of free flavins by NADPH. The flavin is then utilized by the large subunit of the monooxygenase.	3.21981e-97
NZ_NVYQ01000165.1\|WP_025460218.1\|7741_8833_+\|redox-regulated-ATPase-YchF	gnl\|CDD\|236583	PRK09601, PRK09601, redox-regulated ATPase YchF.	0
NZ_NVYQ01000165.1\|WP_025460689.1\|5950_7627_+\|formate--tetrahydrofolate-ligase	gnl\|CDD\|376511	pfam01268, FTHFS, Formate--tetrahydrofolate ligase.	0
NZ_NVYQ01000165.1\|WP_002248129.1\|1046_2126_-\|iron-sulfur-cluster-carrier-protein-ApbC	gnl\|CDD\|378455	pfam10609, ParA, NUBPL iron-transfer P-loop NTPase. This family contains ATPases involved in plasmid partitioning. It also contains the cytosolic Fe-S cluster assembling factor NBP35 which is required for biogenesis and export of both ribosomal subunits.	3.38304e-144
NZ_NVYQ01000165.1\|WP_002224071.1\|11140_12436_+\|tyrosine--tRNA-ligase	gnl\|CDD\|235645	PRK05912, PRK05912, tyrosyl-tRNA synthetase; Validated.	0
NZ_NVYQ01000165.1\|WP_101126240.1\|9207_11079_+\|acyltransferase	gnl\|CDD\|224748	COG1835, COG1835, Predicted acyltransferases [Lipid metabolism].	5.24746e-75

>NZ_NVYQ01000165.1|WP_002248129.1|1046_2126_-|iron-sulfur-cluster-carrier-protein-ApbC
MNIQNIRTLLDTVAVPNTARTLGGEKAVRSVEQRSDGIHIALHFGFPVAHIASETADRIQEILMPLTGDTHIHLSMDTEIGTHKVQPGVTTIKGVKNIIAVASGKGGVGKSTTTANLAAAMARMGARVGVLDADLYGPSQPTMLGVDDRKPDQKNQKLIPVESSNGIQVMSIGFLVDTDQAVVWRGPMVSQALQQLMFQSEWDEVDYLFIDLPPGTGDIQLTLSQRIPVTGSVIVTTPQDIALIDARKAVDMFRKVNIPILGVLENMSVHICSNCGHSEALFGTDGGKDLAARLNVPLLGQLPLSLPVREAMDGGTPAQLFDEHPAIARIYTDAAFQIALGIADKGKDFSSRFPKIVVE
>NZ_NVYQ01000165.1|WP_061384619.1|2495_3005_+|protein-disulfide-oxidoreductase
MKKKLLSGIKFAVQTALVFLLVSLFLDWIRKPDEPAGAAGRPLTLLSGQRLTLGQFSRDKAVLVYFWGSWCGVCRYQSPIIDDLAADGVPVVGVAVRSGSSAEVAAYMAKRGLGFPTANDEDGDLARSWRIVATPAVVLVKNGKMVHYTTGISSYWGLRARIFQADVFG
>NZ_NVYQ01000165.1|WP_002221507.1|3347_3788_+|MarR-family-adhesin-repressor-NadR
MPTQSKHASINISLIQAREALMTQFRPILNQANITDQQWRIIRLLAENGTLDFQDLANQACILRPSLTGILTRLEKAGLVVRLKPSNDQRRVFLKLTAEGEKLYEEIGEEVDERYDAIEEVLGREKMLLLKDLLAELAKIEDALNS
>NZ_NVYQ01000165.1|WP_002221506.1|3902_4403_+|4-hydroxyphenylacetate-3-monooxygenase,-reductase-component
MADLQKTFQTSFRDAMASCAAGVHVITTDGAAGRYGITMTAVTPVTDEPPTVMLCINRKARIIPILSENGSLCINTLADEHQDVAEHFAGLTGLSPEERFAYHIWHRGKTGQLEIEGALAHLHGHIVGKHEIGTHFVFYVRLDEIKNCGCKRPALLYFRRQFRFLD
>NZ_NVYQ01000165.1|WP_002221505.1|4418_5114_+|nucleotidyltransferase-family-protein
MKAMILAAGRGERMRPLTDTTPKPLLDVAGKPLIGWHLCRLKQAGFTEIVINHAWLGRQIEDALGDGSAYGVNIAYSPEPAGGLETAGGIAQALPLLGGQPFLVVNGDVLTDIDFTAAFQAASSLPEHISAHLWLVENPPHNPDGDFSLLPDGSVRPEVNGGNGLTFSGVGIYRPEMFDGIEAGSVAKLAPVLRGEMRQNRVSGQKHTGLWLDVGTVCRLKEAQALAGAWK
>NZ_NVYQ01000165.1|WP_117366070.1|5344_5776_-|EamA-family-transporter
MSSNAWLFWALASAGFASLTAVFAKMGLQGIDSDFATFIHTLVILAALVLFLTYTGKWQGVNGFTGRNWTFLILSGLATGASWLAYFKALQLGNASQVAPIDKFSLVLVALMAVVFLDERPNTQEWIGLGLVTAGVLVLALKR
>NZ_NVYQ01000165.1|WP_025460689.1|5950_7627_+|formate--tetrahydrofolate-ligase
MSFKTDAEIAQSSTMRPIGEIAAKLGLNADNIEPYGHYKAKINPAEAFKLPQKQGRLILVTAINPTPAGEGKTTVTIGLADALRHIGKDAVIALREPSLGPVFGVKGGAAGGGYAQVLPMEDINLHFTGDFHAIGAANNLLAAMLDNHIYQGNELDIDPKRVLWRRVVDMNDRQLRNIIDGMGKPVDGVMRPDGFDITVASEVMAVFCLAKDISDLKERLGNILVAYAKDGSPVYAKDLKANGAMAALLKDAIKPNLVQTIEGTPAFVHGGPFANIAHGCNSVTATRLAKHLADYAVTEAGFGADLGAEKFCDIKCRLADLKPDAAVVVATVRALKYNGGVERANLGEENLDALEKGLPNLLKHISNLKNVFGLPVVVALNRFVSDSDAELAMIEKACAEHGVEVSLTEVWGKGGAGGADLARKVVNAIESQTNNFGFAYDVELGIKDKIRAIAQKVYGAEDVDFSAEASAEIASLEKLGLDKMPICMAKTQYSLSDNAKLLGCPEGFRITVRGITVSAGAGFIVALCGNMMKMPGLPKVPAAEKIDVDAEGVIHGLF
>NZ_NVYQ01000165.1|WP_025460218.1|7741_8833_+|redox-regulated-ATPase-YchF
MSLKCGIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGVVEVPDPRMAELAKIVNPQKMQPAIVEFVDIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDDNIVHVAGRVDPIADIETIGTELALADLASVEKAIVREEKRARSGDKDAQKLVDLCKKLLPHLDEGKPVRSFGLDAEERAMLKPLFLLTAKPAMYVGNVAEDGFENNPHLDRLKELAAKENAPIVAVCAAMESEIAELEDDEKAEFLAEMGLEEPGLNRLIRAGYDLLGLQTYFTAGVKEVRAWTIHKGDTAPQAAGVIHTDFERGFIRAQVISYDDFVSLGGEAKAKEAGKMRVEGKEYVVQDGDVMHFLFNV
>NZ_NVYQ01000165.1|WP_101126240.1|9207_11079_+|acyltransferase
MSQALPYRPDIDTLRAAAVLSVIVFHIEKNWLPGGFLGVDIFFVISGFLMTAILLREMSGGGGRFSLKAFYIRRIKRILPAFFAVLAATLIGGFFLFTKDDFFLLWKSALTALGFASNLYFARGKDYFAPAQEEKPLLHIWSLSVEEQFYFVFPILLLLVVRKSLRVQAGFLAALCALSLATSFIPSAFDKYYLPHLRACEMLVGSLTAVWMRCRQPAVGRRCAAAGALFAVCILSTCLFSYSEQTAYFPGPAALIPCLAVAALIYFNHYEHPLKKFFQWKITVAAGLISYSLYLWHWPILAFMRYIGPDNLPPYSPAAAIVLTLAFSLISYHCIEKPFKKWQGSFAQSVLWIYALPMLILGAGSFFAMRLPFMAQYDRLGLTRSNTSCHNNTGKQCLWGDTEKQPELLILGDSHADHYKTFFDAVGKKEKWSATMVSADACAYVEGYASRVFQNWAACRAVYRYAEEHLPRYSKVVLAMRWGSQMPENSRSLAYDAGFFQKFDRMLHKLSSEKQAVYLMADNLASSYNVQRAYILSSRIPGYRQTLRPDDESTLKANARIRELAAKYPNVYIIDAAAYIPADFQIGGLPVYSDTDHINPYGGTELAKRFSEKQRFLNTRHNH
>NZ_NVYQ01000165.1|WP_002224071.1|11140_12436_+|tyrosine--tRNA-ligase
MSVIQDLQSRDLIAQTTDIEALDALLNEQKIALYCGFDPTADSLHIGHLLPVLALRRFQQAGHTPIALVGGATGMIGDPSFKAAERSLNSAETVAGWVESIRSQLTPFLSFEGGNAAIMANNADWFGKMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRDGAGISFTEFAYSLLQGYDFAELNKRHGAVLEIGGSDQWGNITAGIDLTRRLYQKQVFGLTLPLVTKSDGTKFGKTEGGAVWLNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIDAIEAKDKASGSKPEAQRILAEEMTRLIHGEEALAAAQRISESLFAEDQSSLTESDFEQLALDGLPAFEVSDGINVVEALVKTGLASSNKEARGFVNSKAVLLNGKPAEANNPNHAAERPDDACLLNGEHKRFGKYTILRRGKRNHALLVWK

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_NVYQ01000165_2	2.1\|709\|42\|NZ_NVYQ01000165\|CRISPRCasFinder	709-750	42	NZ_NVYQ01000145.1	1907-1948	0	1.0
NZ_NVYQ01000165_2	2.2\|777\|48\|NZ_NVYQ01000165\|CRISPRCasFinder	777-824	48	NZ_NVYQ01000049.1	451-498	1	0.979

1. spacer 2.1|709|42|NZ_NVYQ01000165|CRISPRCasFinder matches to position: 1907-1948, mismatch: 0, identity: 1.0

gtcttttataatctttgaatattgctgttgttctaaggtcta	CRISPR spacer
gtcttttataatctttgaatattgctgttgttctaaggtcta	Protospacer
******************************************

2. spacer 2.2|777|48|NZ_NVYQ01000165|CRISPRCasFinder matches to position: 451-498, mismatch: 1, identity: 0.979

tttagaagttgcccgaaacctcaaaaaaaaccgaaaccgaacaagccg	CRISPR spacer
tttagaagttgcccgaaacctcaaaaaaaactgaaaccgaacaagccg	Protospacer
*******************************.****************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

28. NZ_NVYQ01000032

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

29. NZ_NVYQ01000145

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

30. NZ_NVYQ01000028

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

29329 : 39513

Vibrio_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_041267007.1\|29329_29623_-	DUF1364 domain-containing protein	E5AGG0	Erwinia_phage	2.1e-25	55.2
WP_014580650.1\|29619_30225_-	DUF1367 family protein	I3PV01	Vibrio_phage	4.7e-35	38.0
WP_061727184.1\|30415_30964_-	RusA family crossover junction endodeoxyribonuclease	NA	NA	NA	NA
WP_014580647.1\|31095_31245_-	hypothetical protein	NA	NA	NA	NA
WP_014580646.1\|31609_32074_-	hypothetical protein	NA	NA	NA	NA
WP_061730233.1\|32088_32781_-	hypothetical protein	U4KJA1	Streptococcus_phage	1.0e-14	32.9
WP_002238711.1\|33108_33885_-	ATP-binding protein	A0A059WFK9	Vibrio_phage	3.4e-38	35.0
WP_002238712.1\|33896_34769_-	replication protein	A0A0P0IKQ2	Acinetobacter_phage	2.1e-12	50.7
WP_014580643.1\|34801_35029_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_014580259.1\|35091_35322_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_002255715.1\|35435_36134_+	helix-turn-helix domain-containing protein	Q7Y5W5	Haemophilus_phage	1.3e-52	55.1
WP_002255716.1\|36133_36694_+	hypothetical protein	NA	NA	NA	NA
WP_042743703.1\|37003_37204_+	hypothetical protein	NA	NA	NA	NA
WP_002255718.1\|37236_37713_+	hypothetical protein	B5AXA3	Iodobacteriophage	2.2e-24	64.2
WP_117375320.1\|37709_37985_+	hypothetical protein	NA	NA	NA	NA
WP_002231766.1\|38125_38449_+	hypothetical protein	NA	NA	NA	NA
WP_042743705.1\|38602_38878_+	phage associated protein	NA	NA	NA	NA
WP_014580636.1\|38874_39513_+	hypothetical protein	A0A0M3LP90	Mannheimia_phage	6.6e-64	56.4

Anti-CRISPR protein detection

Acr_ID: NZ_NVYQ01000028.1|WP_042743676.1|271_622_+|anti-CRISPR-protein-AcrIIC3

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Acr_ID: NZ_NVYQ01000028.1|WP_042743678.1|667_1039_+|anti-CRISPR-protein-AcrIIC2

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Acr_ID: NZ_NVYQ01000028.1|WP_117375320.1|37709_37985_+|hypothetical-protein

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Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_NVYQ01000028.1|WP_042743676.1|271_622_+|anti-CRISPR-protein-AcrIIC3

271_622_+

116 aa aa

AcrIIC3

hit_Aca_id	identity	query_coverage	hit_coverage
anti_CRISPR0119\|WP_042743676.1\|AcrIIC3\|II-C\|Verified\|Neisseria-meningitidis	1.0	1	1.0

NZ_NVYQ01000028.1_1031_1241_+

Protein_id	Hit_Aca_id	Identity	Query_coverage	Hit_coverage
NZ_NVYQ01000028.1_1031_1241_+	AcrIIC2-Aca3\|WP_042743680.1	1.0	1	1.0

NZ_NVYQ01000028.1|WP_042743678.1|667_1039_+|anti-CRISPR-protein-AcrIIC2

667_1039_+

123 aa aa

NZ_NVYQ01000028.1_1031_1241_+

Protein_id	Hit_Aca_id	Identity	Query_coverage	Hit_coverage
NZ_NVYQ01000028.1_1031_1241_+	AcrIIC2-Aca3\|WP_042743680.1	1.0	1	1.0

NZ_NVYQ01000028.1|WP_117375320.1|37709_37985_+|hypothetical-protein

37709_37985_+

91 aa aa

29329-39513

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_NVYQ01000092_1	Orphan	1.15\|1341\|30\|NZ_NVYQ01000092\|PILER-CR,CRISPRCasFinder,CRT	1341-1370	30	38794-38823	0

1. spacer 1.15|1341|30|NZ_NVYQ01000092|PILER-CR,CRISPRCasFinder,CRT matches to NZ_NVYQ01000028 position: 38794-38823, mismatch: 0

ggaagagcggcatctgaatgcggaagaaga	CRISPR spacer
ggaagagcggcatctgaatgcggaagaaga	Protospacer
******************************

31. NZ_NVYQ01000148

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CRISPR-Cas detection and classification

Crispr_ID: NZ_NVYQ01000148_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_NVYQ01000148_1

12362-12516

Orphan

Consensus_repeat	Method
CCGCCGCAACGCGACCTCGCTGCAATTAAGCCGCTGCGCCAACATCGCCGAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_NVYQ01000148_1

>merge|NZ_NVYQ01000148|1|12362-12516|CRISPRCasFinder
CCGCCGCAACGCGACCTCGCTGCAATTAAGCCGCTGCGCCAACATCGCCGACCGGACTGGGCTGGATGCACTGGGTGGTCGCCGACATTCCCGCCGATGTCCGCCGCCGCAACGCGGCCTCGCTGCAATTAAGCCGCTGCGCCAACATCGCCGAC

>NZ_NVYQ01000148|1|1|12362-12516|CRISPRCasFinder
CCGCCGCAACGCGACCTCGCTGCAATTAAGCCGCTGCGCCAACATCGCCGAC	CGGACTGGGCTGGATGCACTGGGTGGTCGCCGACATTCCCGCCGATGTCCG
CCGCCGCAACGCGGCCTCGCTGCAATTAAGCCGCTGCGCCAACATCGCCGAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_NVYQ01000148.1\|WP_025460061.1\|16050_16617_-\|azurin	unknown	unknown	gnl\|CDD\|225781
NZ_NVYQ01000148.1\|WP_002235050.1\|15448_15958_-\|hemerythrin-domain-containing-protein	unknown	unknown	gnl\|CDD\|213983
NZ_NVYQ01000148.1\|WP_002235988.1\|17450_20201_+\|preprotein-translocase-subunit-SecA	unknown	unknown	gnl\|CDD\|237259
NZ_NVYQ01000148.1\|WP_181965945.1\|6686_8729_-\|autotransporter-outer-membrane-beta-barrel-domain-containing-protein	unknown	unknown	gnl\|CDD\|273608
NZ_NVYQ01000148.1\|WP_025460059.1\|13536_14682_-\|succinyl-diaminopimelate-desuccinylase	unknown	unknown	gnl\|CDD\|237265
NZ_NVYQ01000148.1\|WP_025460060.1\|14794_15415_-\|diadenosine-tetraphosphatase	unknown	unknown	gnl\|CDD\|371245
NZ_NVYQ01000148.1\|WP_100206514.1\|389_2231_-\|protein-disulfide-reductase-DsbD	unknown	unknown	gnl\|CDD\|226685
NZ_NVYQ01000148.1\|WP_002219021.1\|2321_2792_+\|DUF1841-family-protein	unknown	unknown	gnl\|CDD\|370177
NZ_NVYQ01000148.1\|WP_002229699.1\|9595_10606_-\|lipopolysaccharide-heptosyltransferase-II	unknown	unknown	gnl\|CDD\|274026
NZ_NVYQ01000148.1\|WP_025460062.1\|20346_22119_+\|DNA-primase	unknown	unknown	gnl\|CDD\|235551
NZ_NVYQ01000148.1\|WP_025460063.1\|22305_24234_+\|RNA-polymerase-sigma-factor-RpoD	unknown	unknown	gnl\|CDD\|235549
NZ_NVYQ01000148.1\|WP_002242861.1\|2862_3675_-\|squalene-synthase-HpnC	unknown	unknown	gnl\|CDD\|274592
NZ_NVYQ01000148.1\|WP_002250272.1\|5138_6506_+\|FAD-binding-oxidoreductase	unknown	unknown	gnl\|CDD\|223354
NZ_NVYQ01000148.1\|WP_002229688.1\|9094_9541_-\|SsrA-binding-protein-SmpB	unknown	unknown	gnl\|CDD\|235455
NZ_NVYQ01000148.1\|WP_025460058.1\|11002_11755_-\|methylated-DNA--[protein]-cysteine-S-methyltransferase	unknown	unknown	gnl\|CDD\|223427
NZ_NVYQ01000148.1\|WP_025460056.1\|4717_5029_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237030
NZ_NVYQ01000148.1\|WP_002248089.1\|16897_17320_-\|DUF721-domain-containing-protein	unknown	unknown	gnl\|CDD\|377496
NZ_NVYQ01000148.1\|WP_002212871.1\|3761_4244_-\|peptidylprolyl-isomerase	unknown	unknown	gnl\|CDD\|223976

Protein	Function_ID	Function_description	E-value
NZ_NVYQ01000148.1\|WP_025460061.1\|16050_16617_-\|azurin	gnl\|CDD\|225781	COG3241, COG3241, Azurin [Energy production and conversion].	1.13642e-73
NZ_NVYQ01000148.1\|WP_002235050.1\|15448_15958_-\|hemerythrin-domain-containing-protein	gnl\|CDD\|213983	cd12108, Hr-like, Hemerythrin-like domain. Hemerythrin (Hr) like domains have the same four alpha helix bundle and a similar, but slightly different active site structure than hemerythrin. They are non-heme diiron binding proteins mainly found in bacteria and eukaryotes. Like Hr, they may be involved in oxygen transport or like human FBXL5 (F-box and leucine-rich repeat protein 5), a member of this group, play a role in cellular iron homeostasis.	2.74504e-11
NZ_NVYQ01000148.1\|WP_002235988.1\|17450_20201_+\|preprotein-translocase-subunit-SecA	gnl\|CDD\|237259	PRK12904, PRK12904, preprotein translocase subunit SecA; Reviewed.	0
NZ_NVYQ01000148.1\|WP_181965945.1\|6686_8729_-\|autotransporter-outer-membrane-beta-barrel-domain-containing-protein	gnl\|CDD\|273608	TIGR01414, Contains:_AIDA-I_translocator, outer membrane autotransporter barrel domain. A number of Gram-negative bacterial proteins, mostly found in pathogens and associated with virulence, contain a conserved C-terminal domain that integrates into the outer membrane and enables the N-terminal region to be delivered across the membrane. This C-terminal autotransporter domain is about 400 amino acids in length and includes the aromatic amino acid-rich OMP signal, typically ending with a Phe or Trp residue, at the extreme C-terminus. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis].	4.17438e-98
NZ_NVYQ01000148.1\|WP_025460059.1\|13536_14682_-\|succinyl-diaminopimelate-desuccinylase	gnl\|CDD\|237265	PRK13009, PRK13009, succinyl-diaminopimelate desuccinylase; Reviewed.	0
NZ_NVYQ01000148.1\|WP_025460060.1\|14794_15415_-\|diadenosine-tetraphosphatase	gnl\|CDD\|371245	pfam10786, G6PD_bact, Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49). This family is conserved in Firmicutes and Proteobacteria. Several members are annotated as being glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49) but this could not be confirmed.	4.07332e-105
NZ_NVYQ01000148.1\|WP_100206514.1\|389_2231_-\|protein-disulfide-reductase-DsbD	gnl\|CDD\|226685	COG4232, COG4232, Thiol:disulfide interchange protein [Posttranslational modification, protein turnover, chaperones / Energy production and conversion].	0
NZ_NVYQ01000148.1\|WP_002219021.1\|2321_2792_+\|DUF1841-family-protein	gnl\|CDD\|370177	pfam08897, DUF1841, Domain of unknown function (DUF1841). This family of proteins are functionally uncharacterized.	1.31096e-64
NZ_NVYQ01000148.1\|WP_002229699.1\|9595_10606_-\|lipopolysaccharide-heptosyltransferase-II	gnl\|CDD\|274026	TIGR02195, ADP-heptose--LPS_heptosyltransferase_2, lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides].	8.59856e-168
NZ_NVYQ01000148.1\|WP_025460062.1\|20346_22119_+\|DNA-primase	gnl\|CDD\|235551	PRK05667, dnaG, DNA primase; Validated.	0
NZ_NVYQ01000148.1\|WP_025460063.1\|22305_24234_+\|RNA-polymerase-sigma-factor-RpoD	gnl\|CDD\|235549	PRK05658, PRK05658, RNA polymerase sigma factor RpoD; Validated.	0
NZ_NVYQ01000148.1\|WP_002242861.1\|2862_3675_-\|squalene-synthase-HpnC	gnl\|CDD\|274592	TIGR03464, HpnC, squalene synthase HpnC. This family of genes are members of a superfamily (pfam00494) of phytoene and squalene synthases which catalyze the head-t0-head condensation of polyisoprene pyrophosphates. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. In the organisms Zymomonas mobilis and Bradyrhizobium japonicum these genes have been characterized as squalene synthases (farnesyl-pyrophosphate ligases). Often, these genes appear in tandem with the HpnD gene which appears to have resulted from an ancient gene duplication event. Presumably these proteins form a heteromeric complex, but this has not yet been experimentally demonstrated.	3.54221e-136
NZ_NVYQ01000148.1\|WP_002250272.1\|5138_6506_+\|FAD-binding-oxidoreductase	gnl\|CDD\|223354	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion].	2.60784e-128
NZ_NVYQ01000148.1\|WP_002229688.1\|9094_9541_-\|SsrA-binding-protein-SmpB	gnl\|CDD\|235455	PRK05422, smpB, SsrA-binding protein SmpB.	9.91066e-78
NZ_NVYQ01000148.1\|WP_025460058.1\|11002_11755_-\|methylated-DNA--[protein]-cysteine-S-methyltransferase	gnl\|CDD\|223427	COG0350, Ada, Methylated DNA-protein cysteine methyltransferase [DNA replication, recombination, and repair].	1.77632e-61
NZ_NVYQ01000148.1\|WP_025460056.1\|4717_5029_+\|hypothetical-protein	gnl\|CDD\|237030	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit.	2.20837e-11
NZ_NVYQ01000148.1\|WP_002248089.1\|16897_17320_-\|DUF721-domain-containing-protein	gnl\|CDD\|377496	pfam05258, DUF721, Protein of unknown function (DUF721). This family contains several actinomycete proteins of unknown function.	8.38895e-07
NZ_NVYQ01000148.1\|WP_002212871.1\|3761_4244_-\|peptidylprolyl-isomerase	gnl\|CDD\|223976	COG1047, SlpA, FKBP-type peptidyl-prolyl cis-trans isomerases 2 [Posttranslational modification, protein turnover, chaperones].	7.29573e-52

>NZ_NVYQ01000148.1|WP_025460058.1|11002_11755_-|methylated-DNA--[protein]-cysteine-S-methyltransferase
MITLPSLNNLPSKWDEIRYWLETQVFECEVMPYPNLTEHEAKQFERDFWDNIGCAPEEYVRIRRAIRLLEARYPDSLNELVCAAIATPLGEMLAVFGNKGLCLLEFVGQKHLEQEIAAVQKALRGRFVFREDERTQLLRQELDLYFKGRLKTFATPLEQIGTEFQKQAWDALLAIPYGETRSYKEQAQHLGNPKAVRAVAAANGQNKVSILIPCHRVIGSDGKLTGYAGGLNRKQFLLALERGEVQTALF
>NZ_NVYQ01000148.1|WP_002229699.1|9595_10606_-|lipopolysaccharide-heptosyltransferase-II
MSIKILIISPSWIGDCVMTQPLFRRLKELHPGCTIDVFAPKWSMAVFERMPEVNEILENPFGHGALELKRRWRVGRDLGRRGYDQVIVLPGSLKSAVIALATGIAKRTGYVGESRYFLLNDIRRLDKERLPLMVDRYTALAHPSQEDFDGHSGFPEFSIDERRREISVETFGLNLGKPVLAFCPGAEFGPAKRWPTRHFAELGKHYLAAGWQVWLFGSQKDDEIAEEINCLSDGMCVNLCGKTDLSQAMDLLSLADTVVCNDSGLMHLAAALGRKVVAVYGSSSPTHTPPLSDRAKIVSLHLECSPCFKRECPLGHTDCLNRLYPEKIVQAVEEAV
>NZ_NVYQ01000148.1|WP_002229688.1|9094_9541_-|SsrA-binding-protein-SmpB
MAIANNKKAFHDFFIEDRIEAGLVLEGWEVKAIRAARVQLKESYIYWKKDAFYLVGCHITALPTASTHIKPDAVRPRKLLLNQSEINKLIGKTERAGYTIVPLDLHFSRGKIKMEIGLAKGKKQHDKRQSMKEADWKREKQRLIKHTR
>NZ_NVYQ01000148.1|WP_181965945.1|6686_8729_-|autotransporter-outer-membrane-beta-barrel-domain-containing-protein
MYYETRSKQASKQKFKKSFIISLFFSILYTSPLLAVDYVYDNSKLTNEQIDRLKKLRDKSSEYWKQETYLLKPTNGSSQNSLKVPALYSKTHQFENINNSKKISFYDKEYTEDYLVGFARGFGVEKRNGEEEKTLQQYFKDCVNTGNSNNDQCEQPSFGNSGPRLIKSDIFALAPQIKNSHINSEILSVGNYIEWLRPTLNKLPSWQEHLYSGLDPFHYIEVTDNSHVIGQTISLDEFRLENSLWEPRWDSDVGELKTTNADIRFNTKSESLLVKEDYAGGARFRFAYGLKDKVPETPVLTFEKNITGTSDIIFENPIDDLKSLDGHQIIKVNGTADKHAFRLSGKHQKGIYTLSLQQRPEGFFTKVQERDDISIYAQQAQAANTLFALRLNDKNSDIFDRTLPRKGLWLRVIDGHSKQWVQGKTTPVEGNRKGVQLGGEVFTWQNESNQLSVGLMGGQAEQRSTFRNPDTDNLTTGNVKGFGAGVYATWHQLQDKQTGAYADSWVQYQRFRHRINTEDATERFTSKGITASIEAGYNALLAEHFTEKGNRVRFYLQPQAQLTYLGVNGKFSDSENAQVNLLGFRQLQSRVGVQAKAQFSLYKNIAIEPFAAVNALYHNKPFGVEMDGERRVINNKTAIESQLGVAVKIKSHLTLQATFNRQTGKHHQAKQGALNLQWTF
>NZ_NVYQ01000148.1|WP_002250272.1|5138_6506_+|FAD-binding-oxidoreductase
MPDLHTEFSRLLPADEIAELSPTLLKDQRNRFTSAPDIILQPRSVESVQTIMRFCYKHRIPVTPQGGNTGLCGAAVSENGVLLNLSKLNRIRSINLSDNCITVEAGSVLQTVQQAAEASNRLFPLSLASEGSCQIGGNIACNAGGLNVLRYGTMRDLVIGLEVVLPNGELVSHLHPLHKNTTGYDLRHLFIGSEGTLGIITAATLKLFARPSDKATAWVGIPDIESAVRLLTETQAHFAERLCSFELIGRFAAELSSEFSKFPLPTHSEWHILLELTDSLPDSNLDDRLVEFLYKKGFTDSVLAQSEQERIHMWALRENISASQRKLGTSIKHDIAIPIGRVADFVRRCAKDLEQNFKGIQIVCFGHLGDGSLHYNTFLPEILSNEVYRYENDINDAVYRNVLACNGTIAAEHGIGIIKKQWLDKVRTPAEIALMKSIKQHLDPYNIMNPGKLLP
>NZ_NVYQ01000148.1|WP_025460056.1|4717_5029_+|hypothetical-protein
MKKSLFAAALLSLVLAACGGEKAAEAPATEAPAAEAPATEAPAAEAPATEAPAAEAPAAEAPAAEAPATEAPAAEAAATEAPAAEAAATEAPAAEAPAAEAAK
>NZ_NVYQ01000148.1|WP_002212871.1|3761_4244_-|peptidylprolyl-isomerase
MAIVKNSVVSLHYEMYDANNQLLDKTEEPIAYLHGGYDGIFPLVEEALHGKDAGDTVDVALSPDDAFGEQDPELVRIEDAGVFPVEVEVGMMFEADDPETGDVVVYRVTDVADGKAVVDGNHPLAGMKIRFKATVESVRDASDEEIAHGHVHGPHGHHHH
>NZ_NVYQ01000148.1|WP_002242861.1|2862_3675_-|squalene-synthase-HpnC
MSVGHYENFPVGSLILPRRLRKPVHAVYAFARTADDMADEGSMPSEARLAGLEGLQRELDVLASGGRSAHPLIARLDAEAVVPFGLDLQPFYDLLSAFSQDVVKTRYAHFGELADYCRRSANPVGRIMLALYGKTDAVCVAQSDGICTALQLVNFWQDVAVDWQKGRVYIPQDDLLKFGVSEGQIAEGRADAAFQRLMAYECRRAFRMLKAGSPLARELKGRIGLELRMIVLGAQLILQKLDACRYDVFAQRPVLDKKDWLIMLKRALWK
>NZ_NVYQ01000148.1|WP_002219021.1|2321_2792_+|DUF1841-family-protein
MYDVNTHDVRRFFARVWQQRLNPLQLSALEQKALRIIEAHPEYHRYLERIEDHLDTDWLPENGESNPFLHISLHLSVQEQAGIDQPHGIRAIHDTLCAKRGWLEAEHEMMEALAETLWTAQRYGTGLDVNFYMTRLRKLIGLGAEDQARLNPHKIA
>NZ_NVYQ01000148.1|WP_100206514.1|389_2231_-|protein-disulfide-reductase-DsbD
MQTNYLSETDSIMKKLICLFAVFLMLCGRAFALDANDLLPPEKAFVPELAVADDGVNVRFRIADGYYMYQAKIVGKTNPADLLGQPSFSKGEEKEDEFFGRQTVYHHEAQVAFPYAKAVGEPYKLVLTYQGCAEVGVCYPPVDTEFDISGNGTYHPQTDEPASAKDRFLQPSSQNGSGALPPPKGDEGGDSRFKLSWDTLNANLLAFFLAGLGLSFTACMYPLLPIVSSIVVGDKKAGKARAFVLSVVYVQGLALTYTLVGIVAGLTGALLTVWLQQAWVVLAASALMVVLALSMFGLFNIQLPNAVQSYFQNQSSRLSGGKIVSVFIMGILSALIVGPCVAPPLAFALGYIGQTGDAVLGGLALYTLALGTGVPLIAIGTFGGHILPKAGDWMNAVKYAFGFILLAVAVYLATPHLPYYLVVALYTLLMLVPACMLLVNGRRQKRRPKAVAFALGGILLIGGAWFGWQGANGKTTALHHFLTLNPPAEAGKSSEHGKMFADTAALKAAMDTALKEHPDKPVVLDFYADWCISCKEMAAYTLNQPEVHQAVDMERFFQIDVTANTPEHQALLKEYGLFGPPGVFVVRSDGSRSEPLLGFVKADKFIEWYEQNR
>NZ_NVYQ01000148.1|WP_025460059.1|13536_14682_-|succinyl-diaminopimelate-desuccinylase
MTETQSLELAKALISRPSVTPDDRDCQKLLVERLYKIGFAAEALHFGDTKNIWLRRGTKAPVVCFAGHTDVVPTGPVEKWDSPPFEPAERDGRLYGRGAADMKTSIACFVTACERFVAEHPDHQGSIALLITSDEEGDALDGTTKVVDVLKARDELIDYCIVGEPTAVDKLGDMIKNGRRGSLSGNLTVKGKQGHIAYPHLAINPVHTFAPALLELTQEVWDEGNKYFPPTSFQISNINGGTGATNVIPGELSVKFNFRFSTESTEAGLKQRVHAILDKHGVQYDLQWSCSGQPFLTQAGKLTDVARAAIAETCGIEAELSTTGGTSDGRFIKAIAKELIELGPSNATIHQINENVRLDDIPKLSAVYEGILARLLAGNAV
>NZ_NVYQ01000148.1|WP_025460060.1|14794_15415_-|diadenosine-tetraphosphatase
MLTPKSCDLFNIPFFQFSQLKKYQPESIPQIKADYKENWQIWQQLIQQVAAELGAPFAPPHIERWCNGWQVRAHFFAYFKYEQYKNSAAILSILLNRRRLSVSLDWHCYKADVSPIALPEYNRWLDDFDTDKYAAFDMWHGAESEYDDYRTVAQQNESDRRLQNDEDFFCIGKHIERDDLGKQDVVKWIAETVEDLLPLYEACHGK
>NZ_NVYQ01000148.1|WP_002235050.1|15448_15958_-|hemerythrin-domain-containing-protein
MNPFETKSVTFAEPIEMLYACHGKVRRFCGQVAMLSDYIAENGCNQIVLQTIRQIAQYFNVAAPLHHEDEEENFFPLLLQYAPQAQESVDELLRQHVSLYGNWDAVAAEFAKLEADNAYVPDEEAFKRFVAGYDVHLAIEEPLFDMGKTFIPKEKLTEIGEIMAARRRR
>NZ_NVYQ01000148.1|WP_025460061.1|16050_16617_-|azurin
MKAYLALISAAVIGLAACSQEPAAPAAEATPAAEAPASEAPAAEAAPADAAPADAAEAPAADNCAATVESNDNMQFNTKDIQVSKACKEFTITLKHTGTQPKASMGHNLVIAKAEDMDGVFKDGVGAADTDYVKPDDARVVAHTKLIGGGEESSLTLDPAKLADGDYKFACTFPGHGALMNGKITLVD
>NZ_NVYQ01000148.1|WP_002248089.1|16897_17320_-|DUF721-domain-containing-protein
MNLEQLGRRDALLSGLLKQAGQWRRLDAAVKKLLPANLHPHFQTACVEDGRLILLAANNMAASRLKMIAPSVLPQLAGLDASIRSVSVRLVPKPEKPPKTNTLHLSKAALESFGSAAAKLEKRHPELAEALANLVRRHGA
>NZ_NVYQ01000148.1|WP_002235988.1|17450_20201_+|preprotein-translocase-subunit-SecA
MLTNIAKKIFGSRNDRLLKQYRKSVARINALEEQMQALSDADLQAKTAEFKQRLADGQTLDGILPEAFAVCREASRRTLGMRHFDVQLIGGMVLHDGKIAEMRTGEGKTLVATLAVYLNALAGKGVHVVTVNDYLASRDAGIMEPLYNFLGLTVGVIISDMQPFDRQNAYAADITYGTNNEFGFDYLRDNMVTDQYDKVQRELNFAVVDEVDSILIDEARTPLIISGQADDNIQLYQIMNTVPPHLVRQETEEGEGDYWVDEKAHQVILSEAGHEHAEQILTQMGLLAENDSLYSAANIALMHHLMAALRAHSLFHKDQHYVIQDGEIVIVDEFTGRLMSGRRWSEGLHQAVEAKEGVEIKRENQTLASITFQNYFRLYTKLSGMTGTADTEAFEFQSIYNLETVIIPTNRPVQRKDFNDQIFRSAEEKFEAVVKDIEECHKRGQPVLVGTTSIENSELVSHLLQKAGLPHNVLNAKEHEREALIVAQAGKVGAITVATNMAGRGTDIVLGGNLKHQTDAIRADEALSDEEKQAQIAALEDGWQAEHDKVMEAGGLHIIGTERHESRRIDNQLRGRSGRQGDPGSSRFYLSFEDPLLRLFALDRAAAILNRLAPERGVAIEHNLLTRQIEGAQRKVEGRNFDMRKQVLEYDDVANEQRKVIYSQRNEILTSKDISDLMQEIRSDVVSDLVDTYMPPDSMEEQWDIPTLENRLAAEFRLHEDIQSWLKADNAIDGQDIKERLIERIENEYAAKTELVGKQAMADFERNVMLQVIDNQWREHLAAMDYLRQGIHLRSYAQKNPKQEYKREAFTMFQDLWNGIKFHIASLLTSVQIEQNPVALVEEQPIGNIQSIHSESPDMEELLGQSQTDLVTEAFNPDGTDFSPEALEARGQIVHRNDPCPCGSGLKYKQCHGKLA
>NZ_NVYQ01000148.1|WP_025460062.1|20346_22119_+|DNA-primase
MIPSDFIDELLAKTDIVDIIDEQVPLKKGGANYMACCPFHKEKTPSFSVSPTKQFYHCFSCGAHGSAIGFVMEHQGLSFPEAVQFLADRVGMVVPKVRGQNDNPEVRAERKKKQQTLEETAAAAADFYAQQLKFNPTAKAYLDKRGLSAEVIAHYGLGYAPDGWQPLAQVFQPYPNTALVDTGMVIDNEGRYYDRFRHRIMFPIRNPRGQVIGFGGRVLDDSKPKYLNSPDTPLFNKGKNLYGLYEGRAAVKEAGRILVVEGYMDVVALAQFGVGYGVAALGTATTAEHVKILMRQADSIYFCFDGDSAGRKAAWRALENALPQLKDDKSLHFLFLPEEHDPDSYIRAYGKAQFEDALLNQSKPLSEYFWEHLSDGINLNTQEGKAELVKTSSPLLAQITAPALAYLLKQRLSELVGIDPDNLAQLLGQEAPKRHVKQKNYKLPPISVKQPVMPTLVQRQIRSLLINPDWAAYIDLPDYLALDGDFACLANLAETIKNHPSVPATAQVLEHMRGSPYEETINRIFRSALQSEEMEGGGEEDCENFQIGIKKLLNELKYSQIETLKQKSLQSGLNESEKKLLLSLLTAKQN
>NZ_NVYQ01000148.1|WP_025460063.1|22305_24234_+|RNA-polymerase-sigma-factor-RpoD
MSKNQNHEEYQDDTRPLTIEEQRARLRQLIIMGKERGYITYSEINDALPDDMSDADQIDNIVSMISGLGIQVTEHAPDAEDILLSDNAAVTDDDAVEEAEAALSSADSEFGRTTDPVRMYMREMGQVDLLTREDEIIIAKKIENALKNMVQAISACPGSIAEILELIEKIRKDEIRVDEVVEAIIDPNEVLLNELGLGHLETTAPEKPSNDNSDENEDDEESEEDADEISAANLAELKQKVIGHFAQIEKDYKKMIGRLEKHHSRHKDYLAYRDAIANKLLEVRFATRQIDSLSSSLRGKVENIRKLEREIRDICLDRVHMERDYFIQNFLPEITNLEWIEEEIAKGRVWSDALDRFRHAILEKQTELADMEKETRISIEELKEINKNMVSSEKETAAAKQEMIQANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKMNRISRQHLQETGEEPDSAKLAELMQMPEDKIRKIMKIAKEPISMETPIGDDDDSHLGDFIEDANNVAPADAAMYTSLHEVTKEILESLTPREAKVLRMRFGIDMNTDHTLEEVGRQFDVTRERIRQIEAKALRKLRHPTRSDRLRSFLDSEDSKL

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

32. NZ_NVYQ01000245

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CRISPR-Cas detection and classification

Crispr_ID: NZ_NVYQ01000245_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_NVYQ01000245_1

268-388

Orphan

Consensus_repeat	Method
TTTTTCCGATAGATTCCCGTGGTTTTTCGGTTACTGGATTCCCGCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_NVYQ01000245_1

>merge|NZ_NVYQ01000245|1|268-388|CRISPRCasFinder
TTTTTCCGATAGATTCCCGTGGTTTTTCGGTTACTGGATTCCCGCGTTCGCGGGAATGACGGTCGAGGGTTTCTGTTTTTCCGATAGATTCCTGTGGTTTTTCGGTTACTGGATTCCCGCG

>NZ_NVYQ01000245|1|1|268-388|CRISPRCasFinder
TTTTTCCGATAGATTCCCGTGGTTTTTCGGTTACTGGATTCCCGCG	TTCGCGGGAATGACGGTCGAGGGTTTCTG
TTTTTCCGATAGATTCCTGTGGTTTTTCGGTTACTGGATTCCCGCG

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_NVYQ01000245_1	1.1\|314\|29\|NZ_NVYQ01000245\|CRISPRCasFinder	314-342	29	NZ_NVYQ01000139.1	560-588	0	1.0
NZ_NVYQ01000245_1	1.1\|314\|29\|NZ_NVYQ01000245\|CRISPRCasFinder	314-342	29	NZ_NVYQ01000139.1	48-76	1	0.966
NZ_NVYQ01000245_1	1.1\|314\|29\|NZ_NVYQ01000245\|CRISPRCasFinder	314-342	29	NZ_NVYQ01000139.1	636-664	1	0.966
NZ_NVYQ01000245_1	1.1\|314\|29\|NZ_NVYQ01000245\|CRISPRCasFinder	314-342	29	NZ_NVYQ01000245.1	238-266	1	0.966

1. spacer 1.1|314|29|NZ_NVYQ01000245|CRISPRCasFinder matches to position: 560-588, mismatch: 0, identity: 1.0

ttcgcgggaatgacggtcgagggtttctg	CRISPR spacer
ttcgcgggaatgacggtcgagggtttctg	Protospacer
*****************************

2. spacer 1.1|314|29|NZ_NVYQ01000245|CRISPRCasFinder matches to position: 48-76, mismatch: 1, identity: 0.966

ttcgcgggaatgacggtcgagggtttctg	CRISPR spacer
ttcgcgggaatgacggtcgggggtttctg	Protospacer
*******************.*********

3. spacer 1.1|314|29|NZ_NVYQ01000245|CRISPRCasFinder matches to position: 636-664, mismatch: 1, identity: 0.966

ttcgcgggaatgacggtcgagggtttctg	CRISPR spacer
ttcgcgggaatgacggtcgggggtttctg	Protospacer
*******************.*********

4. spacer 1.1|314|29|NZ_NVYQ01000245|CRISPRCasFinder matches to position: 238-266, mismatch: 1, identity: 0.966

ttcgcgggaatgacggtcgagggtttctg	CRISPR spacer
ttcgcgggaatgacggtcgggggtttctg	Protospacer
*******************.*********

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_NVYQ01000245_1	1.1\|314\|29\|NZ_NVYQ01000245\|CRISPRCasFinder	314-342	29	NC_016585	Azospirillum lipoferum 4B plasmid AZO_p1, complete sequence	337785-337813	6	0.793
NZ_NVYQ01000245_1	1.1\|314\|29\|NZ_NVYQ01000245\|CRISPRCasFinder	314-342	29	NC_016585	Azospirillum lipoferum 4B plasmid AZO_p1, complete sequence	347817-347845	6	0.793
NZ_NVYQ01000245_1	1.1\|314\|29\|NZ_NVYQ01000245\|CRISPRCasFinder	314-342	29	NC_016585	Azospirillum lipoferum 4B plasmid AZO_p1, complete sequence	624567-624595	6	0.793
NZ_NVYQ01000245_1	1.1\|314\|29\|NZ_NVYQ01000245\|CRISPRCasFinder	314-342	29	NZ_CP032695	Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525c, complete sequence	297490-297518	6	0.793
NZ_NVYQ01000245_1	1.1\|314\|29\|NZ_NVYQ01000245\|CRISPRCasFinder	314-342	29	NZ_CP009292	Novosphingobium pentaromativorans US6-1 plasmid pLA3, complete sequence	305649-305677	7	0.759
NZ_NVYQ01000245_1	1.1\|314\|29\|NZ_NVYQ01000245\|CRISPRCasFinder	314-342	29	NC_016585	Azospirillum lipoferum 4B plasmid AZO_p1, complete sequence	624483-624511	7	0.759
NZ_NVYQ01000245_1	1.1\|314\|29\|NZ_NVYQ01000245\|CRISPRCasFinder	314-342	29	NC_016585	Azospirillum lipoferum 4B plasmid AZO_p1, complete sequence	861527-861555	8	0.724
NZ_NVYQ01000245_1	1.1\|314\|29\|NZ_NVYQ01000245\|CRISPRCasFinder	314-342	29	NZ_CP017105	Rhizobium gallicum strain IE4872 plasmid pRgalIE4872d, complete sequence	1822831-1822859	8	0.724

1. spacer 1.1|314|29|NZ_NVYQ01000245|CRISPRCasFinder matches to NC_016585 (Azospirillum lipoferum 4B plasmid AZO_p1, complete sequence) position: , mismatch: 6, identity: 0.793

ttcgcgggaatgacggtcgagggtttctg	CRISPR spacer
ttcgcgggaatgacggctgagggtgttct	Protospacer
****************..****** *..

2. spacer 1.1|314|29|NZ_NVYQ01000245|CRISPRCasFinder matches to NC_016585 (Azospirillum lipoferum 4B plasmid AZO_p1, complete sequence) position: , mismatch: 6, identity: 0.793

ttcgcgggaatgacggtcgagggtttctg	CRISPR spacer
ttcgcgggaatgacggccgaggaaacccg	Protospacer
****************.*****.  .*.*

3. spacer 1.1|314|29|NZ_NVYQ01000245|CRISPRCasFinder matches to NC_016585 (Azospirillum lipoferum 4B plasmid AZO_p1, complete sequence) position: , mismatch: 6, identity: 0.793

ttcgcgggaatgacggtcgagggtttctg-----	CRISPR spacer
ttcgcgggaatgacggccgagg-----tgagtac	Protospacer
****************.*****     **

4. spacer 1.1|314|29|NZ_NVYQ01000245|CRISPRCasFinder matches to NZ_CP032695 (Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525c, complete sequence) position: , mismatch: 6, identity: 0.793

ttcgcgggaatgacggtcgagggtttctg	CRISPR spacer
ttcgcgcgaatgacggtcgaaggctgcga	Protospacer
****** *************.**.* * .

5. spacer 1.1|314|29|NZ_NVYQ01000245|CRISPRCasFinder matches to NZ_CP009292 (Novosphingobium pentaromativorans US6-1 plasmid pLA3, complete sequence) position: , mismatch: 7, identity: 0.759

ttcgcgggaatgacggtcgagggtttctg	CRISPR spacer
cagacgggaatgacggtcgaggctttcaa	Protospacer
.  .****************** **** .

6. spacer 1.1|314|29|NZ_NVYQ01000245|CRISPRCasFinder matches to NC_016585 (Azospirillum lipoferum 4B plasmid AZO_p1, complete sequence) position: , mismatch: 7, identity: 0.759

ttcgcgggaatgacggtcgagggtttctg	CRISPR spacer
ttcgcgggaatgacgggcgaaggaattct	Protospacer
**************** ***.**  *..

7. spacer 1.1|314|29|NZ_NVYQ01000245|CRISPRCasFinder matches to NC_016585 (Azospirillum lipoferum 4B plasmid AZO_p1, complete sequence) position: , mismatch: 8, identity: 0.724

ttcgcgggaatgacggtcgagggtttctg	CRISPR spacer
ttcgcgggaatgacggccgagagaagtgc	Protospacer
****************.****.*   .

8. spacer 1.1|314|29|NZ_NVYQ01000245|CRISPRCasFinder matches to NZ_CP017105 (Rhizobium gallicum strain IE4872 plasmid pRgalIE4872d, complete sequence) position: , mismatch: 8, identity: 0.724

ttcgcgggaatgacggtcgagggtttctg	CRISPR spacer
gcggcgggaatgccggtcgaggatttggc	Protospacer
 . ********* *********.***

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

33. NZ_NVYQ01000280

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage