CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_QZDG01000036	Pectobacterium carotovorum strain S1.16.01.3K contig_36, whole genome shotgun sequence	0 crisprs	cas3	0	1	0
NZ_QZDG01000068	Pectobacterium carotovorum strain S1.16.01.3K contig_68, whole genome shotgun sequence	0 crisprs	NA	0	0	0
NZ_QZDG01000051	Pectobacterium carotovorum strain S1.16.01.3K contig_51, whole genome shotgun sequence	0 crisprs	NA	0	0	0
NZ_QZDG01000038	Pectobacterium carotovorum strain S1.16.01.3K contig_38, whole genome shotgun sequence	0 crisprs	cas3	0	0	0
NZ_QZDG01000054	Pectobacterium carotovorum strain S1.16.01.3K contig_54, whole genome shotgun sequence	0 crisprs	NA	0	0	0
NZ_QZDG01000041	Pectobacterium carotovorum strain S1.16.01.3K contig_41, whole genome shotgun sequence	0 crisprs	NA	0	0	0
NZ_QZDG01000031	Pectobacterium carotovorum strain S1.16.01.3K contig_31, whole genome shotgun sequence	0 crisprs	NA	0	0	0
NZ_QZDG01000017	Pectobacterium carotovorum strain S1.16.01.3K contig_17, whole genome shotgun sequence	3 crisprs	cas3f,cas8f,cas5f,cas7f,cas6f	16	0	0
NZ_QZDG01000072	Pectobacterium carotovorum strain S1.16.01.3K contig_72, whole genome shotgun sequence	0 crisprs	NA	0	0	0
NZ_QZDG01000006	Pectobacterium carotovorum strain S1.16.01.3K contig_6, whole genome shotgun sequence	0 crisprs	NA	0	0	0
NZ_QZDG01000011	Pectobacterium carotovorum strain S1.16.01.3K contig_11, whole genome shotgun sequence	0 crisprs	NA	0	0	0
NZ_QZDG01000050	Pectobacterium carotovorum strain S1.16.01.3K contig_50, whole genome shotgun sequence	0 crisprs	NA	0	0	0
NZ_QZDG01000061	Pectobacterium carotovorum strain S1.16.01.3K contig_61, whole genome shotgun sequence	0 crisprs	NA	0	0	0
NZ_QZDG01000074	Pectobacterium carotovorum strain S1.16.01.3K contig_74, whole genome shotgun sequence	0 crisprs	NA	0	0	0
NZ_QZDG01000055	Pectobacterium carotovorum strain S1.16.01.3K contig_55, whole genome shotgun sequence	0 crisprs	NA	0	0	0
NZ_QZDG01000002	Pectobacterium carotovorum strain S1.16.01.3K contig_2, whole genome shotgun sequence	0 crisprs	csa3	0	0	0
NZ_QZDG01000025	Pectobacterium carotovorum strain S1.16.01.3K contig_25, whole genome shotgun sequence	0 crisprs	NA	0	1	0
NZ_QZDG01000042	Pectobacterium carotovorum strain S1.16.01.3K contig_42, whole genome shotgun sequence	0 crisprs	DEDDh	0	0	0
NZ_QZDG01000053	Pectobacterium carotovorum strain S1.16.01.3K contig_53, whole genome shotgun sequence	0 crisprs	NA	0	0	0
NZ_QZDG01000046	Pectobacterium carotovorum strain S1.16.01.3K contig_46, whole genome shotgun sequence	0 crisprs	NA	0	0	0
NZ_QZDG01000063	Pectobacterium carotovorum strain S1.16.01.3K contig_63, whole genome shotgun sequence	0 crisprs	NA	0	0	0
NZ_QZDG01000024	Pectobacterium carotovorum strain S1.16.01.3K contig_24, whole genome shotgun sequence	1 crisprs	NA	0	1	4
NZ_QZDG01000040	Pectobacterium carotovorum strain S1.16.01.3K contig_40, whole genome shotgun sequence	0 crisprs	NA	0	0	0
NZ_QZDG01000030	Pectobacterium carotovorum strain S1.16.01.3K contig_30, whole genome shotgun sequence	0 crisprs	NA	0	0	0
NZ_QZDG01000056	Pectobacterium carotovorum strain S1.16.01.3K contig_56, whole genome shotgun sequence	0 crisprs	NA	0	0	0
NZ_QZDG01000007	Pectobacterium carotovorum strain S1.16.01.3K contig_7, whole genome shotgun sequence	0 crisprs	DEDDh	0	0	0
NZ_QZDG01000005	Pectobacterium carotovorum strain S1.16.01.3K contig_5, whole genome shotgun sequence	0 crisprs	cas3	0	0	0
NZ_QZDG01000028	Pectobacterium carotovorum strain S1.16.01.3K contig_28, whole genome shotgun sequence	0 crisprs	DEDDh	0	0	0
NZ_QZDG01000018	Pectobacterium carotovorum strain S1.16.01.3K contig_18, whole genome shotgun sequence	0 crisprs	NA	0	0	0
NZ_QZDG01000033	Pectobacterium carotovorum strain S1.16.01.3K contig_33, whole genome shotgun sequence	0 crisprs	NA	0	0	0
NZ_QZDG01000060	Pectobacterium carotovorum strain S1.16.01.3K contig_60, whole genome shotgun sequence	0 crisprs	NA	0	0	0
NZ_QZDG01000065	Pectobacterium carotovorum strain S1.16.01.3K contig_65, whole genome shotgun sequence	0 crisprs	NA	0	0	0
NZ_QZDG01000058	Pectobacterium carotovorum strain S1.16.01.3K contig_58, whole genome shotgun sequence	0 crisprs	NA	0	0	0
NZ_QZDG01000026	Pectobacterium carotovorum strain S1.16.01.3K contig_26, whole genome shotgun sequence	0 crisprs	NA	0	0	0
NZ_QZDG01000019	Pectobacterium carotovorum strain S1.16.01.3K contig_19, whole genome shotgun sequence	0 crisprs	DinG	0	0	0
NZ_QZDG01000039	Pectobacterium carotovorum strain S1.16.01.3K contig_39, whole genome shotgun sequence	0 crisprs	NA	0	0	0
NZ_QZDG01000067	Pectobacterium carotovorum strain S1.16.01.3K contig_67, whole genome shotgun sequence	0 crisprs	NA	0	0	0
NZ_QZDG01000022	Pectobacterium carotovorum strain S1.16.01.3K contig_22, whole genome shotgun sequence	0 crisprs	NA	0	0	0
NZ_QZDG01000016	Pectobacterium carotovorum strain S1.16.01.3K contig_16, whole genome shotgun sequence	0 crisprs	NA	0	0	0
NZ_QZDG01000034	Pectobacterium carotovorum strain S1.16.01.3K contig_34, whole genome shotgun sequence	0 crisprs	NA	0	0	0
NZ_QZDG01000032	Pectobacterium carotovorum strain S1.16.01.3K contig_32, whole genome shotgun sequence	0 crisprs	NA	0	0	0
NZ_QZDG01000037	Pectobacterium carotovorum strain S1.16.01.3K contig_37, whole genome shotgun sequence	0 crisprs	NA	0	0	0
NZ_QZDG01000014	Pectobacterium carotovorum strain S1.16.01.3K contig_14, whole genome shotgun sequence	0 crisprs	NA	0	0	0
NZ_QZDG01000064	Pectobacterium carotovorum strain S1.16.01.3K contig_64, whole genome shotgun sequence	0 crisprs	NA	0	0	0
NZ_QZDG01000023	Pectobacterium carotovorum strain S1.16.01.3K contig_23, whole genome shotgun sequence	0 crisprs	csa3	0	0	0
NZ_QZDG01000066	Pectobacterium carotovorum strain S1.16.01.3K contig_66, whole genome shotgun sequence	0 crisprs	NA	0	0	0
NZ_QZDG01000070	Pectobacterium carotovorum strain S1.16.01.3K contig_70, whole genome shotgun sequence	0 crisprs	NA	0	0	0
NZ_QZDG01000021	Pectobacterium carotovorum strain S1.16.01.3K contig_21, whole genome shotgun sequence	0 crisprs	NA	0	0	0
NZ_QZDG01000073	Pectobacterium carotovorum strain S1.16.01.3K contig_73, whole genome shotgun sequence	0 crisprs	NA	0	0	0
NZ_QZDG01000012	Pectobacterium carotovorum strain S1.16.01.3K contig_12, whole genome shotgun sequence	0 crisprs	NA	0	0	0
NZ_QZDG01000059	Pectobacterium carotovorum strain S1.16.01.3K contig_59, whole genome shotgun sequence	0 crisprs	NA	0	0	0
NZ_QZDG01000009	Pectobacterium carotovorum strain S1.16.01.3K contig_9, whole genome shotgun sequence	0 crisprs	NA	0	0	0
NZ_QZDG01000020	Pectobacterium carotovorum strain S1.16.01.3K contig_20, whole genome shotgun sequence	0 crisprs	NA	0	0	0
NZ_QZDG01000004	Pectobacterium carotovorum strain S1.16.01.3K contig_4, whole genome shotgun sequence	0 crisprs	NA	0	0	0
NZ_QZDG01000057	Pectobacterium carotovorum strain S1.16.01.3K contig_57, whole genome shotgun sequence	0 crisprs	NA	0	0	0
NZ_QZDG01000069	Pectobacterium carotovorum strain S1.16.01.3K contig_69, whole genome shotgun sequence	0 crisprs	cas3	0	0	0
NZ_QZDG01000015	Pectobacterium carotovorum strain S1.16.01.3K contig_15, whole genome shotgun sequence	0 crisprs	NA	0	0	0
NZ_QZDG01000044	Pectobacterium carotovorum strain S1.16.01.3K contig_44, whole genome shotgun sequence	0 crisprs	NA	0	0	0
NZ_QZDG01000010	Pectobacterium carotovorum strain S1.16.01.3K contig_10, whole genome shotgun sequence	0 crisprs	NA	0	0	0
NZ_QZDG01000035	Pectobacterium carotovorum strain S1.16.01.3K contig_35, whole genome shotgun sequence	1 crisprs	DinG	0	1	0
NZ_QZDG01000045	Pectobacterium carotovorum strain S1.16.01.3K contig_45, whole genome shotgun sequence	0 crisprs	NA	0	0	0
NZ_QZDG01000052	Pectobacterium carotovorum strain S1.16.01.3K contig_52, whole genome shotgun sequence	0 crisprs	NA	0	0	0
NZ_QZDG01000029	Pectobacterium carotovorum strain S1.16.01.3K contig_29, whole genome shotgun sequence	0 crisprs	NA	0	0	0
NZ_QZDG01000013	Pectobacterium carotovorum strain S1.16.01.3K contig_13, whole genome shotgun sequence	0 crisprs	NA	0	0	0
NZ_QZDG01000049	Pectobacterium carotovorum strain S1.16.01.3K contig_49, whole genome shotgun sequence	0 crisprs	NA	0	0	0
NZ_QZDG01000071	Pectobacterium carotovorum strain S1.16.01.3K contig_71, whole genome shotgun sequence	0 crisprs	NA	0	0	0
NZ_QZDG01000062	Pectobacterium carotovorum strain S1.16.01.3K contig_62, whole genome shotgun sequence	0 crisprs	NA	0	0	0
NZ_QZDG01000003	Pectobacterium carotovorum strain S1.16.01.3K contig_3, whole genome shotgun sequence	0 crisprs	NA	0	0	0
NZ_QZDG01000048	Pectobacterium carotovorum strain S1.16.01.3K contig_48, whole genome shotgun sequence	0 crisprs	NA	0	0	0
NZ_QZDG01000043	Pectobacterium carotovorum strain S1.16.01.3K contig_43, whole genome shotgun sequence	0 crisprs	NA	0	0	0
NZ_QZDG01000001	Pectobacterium carotovorum strain S1.16.01.3K contig_1, whole genome shotgun sequence	0 crisprs	NA	0	0	0
NZ_QZDG01000008	Pectobacterium carotovorum strain S1.16.01.3K contig_8, whole genome shotgun sequence	1 crisprs	NA	0	1	0
NZ_QZDG01000027	Pectobacterium carotovorum strain S1.16.01.3K contig_27, whole genome shotgun sequence	0 crisprs	DEDDh	0	1	0
NZ_QZDG01000047	Pectobacterium carotovorum strain S1.16.01.3K contig_47, whole genome shotgun sequence	0 crisprs	NA	0	1	0

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

89400 : 102851

Pseudomonas_phage(22.22%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_119871049.1\|89400_89583_+	type II toxin-antitoxin system HicA family toxin	A0A0D4DC32	Acinetobacter_phage	1.8e-06	51.7
WP_039312292.1\|89605_90037_+	CopG family transcriptional regulator	A0A0R6PJ17	Moraxella_phage	6.3e-18	36.6
WP_119871048.1\|90132_92856_-	copper-exporting P-type ATPase CopA	A0A218MNH6	uncultured_virus	1.5e-109	37.4
WP_010284076.1\|92973_93381_+	Cu(I)-responsive transcriptional regulator	NA	NA	NA	NA
WP_014914568.1\|93417_93873_-	NfeD family protein	NA	NA	NA	NA
WP_104213329.1\|93872_94787_-	SPFH/Band 7/PHB domain protein	A0A2K9L3L2	Tupanvirus	9.9e-21	31.3
WP_010284079.1\|95054_95315_-	2Fe-2S ferredoxin-like protein	G9IAA2	Pseudomonas_phage	3.8e-18	61.5
WP_010284080.1\|95318_96449_-	ribonucleotide-diphosphate reductase subunit beta	G9IAA3	Pseudomonas_phage	4.8e-174	79.1
WP_039466786.1\|96571_98857_-	ribonucleoside-diphosphate reductase subunit alpha	A0A2D1GNB1	Pseudoalteromonas_phage	7.1e-286	63.7
WP_119871047.1\|99206_99926_-	bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	A0A1B1IVA4	uncultured_Mediterranean_phage	4.6e-05	31.9
WP_014914571.1\|100211_102851_+	DNA topoisomerase (ATP-hydrolyzing) subunit A	A0A172JHV7	Bacillus_phage	4.5e-106	31.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_QZDG01000035

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_QZDG01000035_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_QZDG01000035_1

74520-74599

Orphan

Consensus_repeat	Method
CTTTAAGCCACTGCCAGCCCTGT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_QZDG01000035_1

>merge|NZ_QZDG01000035|1|74520-74599|CRISPRCasFinder
CTTTAAGCCACTGCCAGCCCTGTAAAATGCCCCGCCATAAACCTTTCGGATTTAGCCCTTTAAGCCACTGCCAGCCCTGC

>NZ_QZDG01000035|1|1|74520-74599|CRISPRCasFinder
CTTTAAGCCACTGCCAGCCCTGT	AAAATGCCCCGCCATAAACCTTTCGGATTTAGCC
CTTTAAGCCACTGCCAGCCCTGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_QZDG01000035.1\|WP_039287146.1\|63667_65536_-\|peptidase-M3	unknown	unknown	gnl\|CDD\|224086
NZ_QZDG01000035.1\|WP_119870444.1\|69446_70550_-\|baseplate-protein	unknown	unknown	gnl\|CDD\|226457
NZ_QZDG01000035.1\|WP_014914969.1\|68872_69454_-\|phage-tail-protein-I	unknown	unknown	gnl\|CDD\|370616
NZ_QZDG01000035.1\|WP_039527428.1\|72874_73804_-\|phage-tail-protein	unknown	unknown	gnl\|CDD\|377754
NZ_QZDG01000035.1\|WP_010281036.1\|80092_80404_-\|hypothetical-protein	unknown	unknown	unknown
NZ_QZDG01000035.1\|WP_119870442.1\|79392_79860_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|370600
NZ_QZDG01000035.1\|WP_014914964.1\|72672_72885_-\|membrane-protein	unknown	unknown	gnl\|CDD\|283209
NZ_QZDG01000035.1\|WP_086002476.1\|76356_76500_-\|GpE-family-phage-tail-protein	unknown	unknown	unknown
NZ_QZDG01000035.1\|WP_119870441.1\|80715_81390_-\|hypothetical-protein	unknown	unknown	unknown
NZ_QZDG01000035.1\|WP_100017067.1\|76904_77201_-\|2Fe-2S-iron-sulfur-cluster-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|177056
NZ_QZDG01000035.1\|WP_119870445.1\|65622_66591_-\|DNA-binding-protein-YbiB	unknown	unknown	gnl\|CDD\|236160
NZ_QZDG01000035.1\|WP_039287185.1\|76444_76765_-\|phage-tail-assembly-protein	unknown	unknown	gnl\|CDD\|378397
NZ_QZDG01000035.1\|WP_039509054.1\|70946_71528_-\|phage-baseplate-assembly-protein-V	unknown	unknown	gnl\|CDD\|226915
NZ_QZDG01000035.1\|WP_010281034.1\|80396_80726_-\|hypothetical-protein	unknown	unknown	unknown
NZ_QZDG01000035.1\|WP_010281046.1\|77257_77782_-\|phage-major-tail-tube-protein	unknown	unknown	gnl\|CDD\|130672
NZ_QZDG01000035.1\|WP_010281043.1\|77781_79209_-\|tail-protein	unknown	unknown	gnl\|CDD\|164955
NZ_QZDG01000035.1\|WP_010281040.1\|79198_79396_-\|hypothetical-protein	unknown	unknown	unknown
NZ_QZDG01000035.1\|WP_039519061.1\|71524_72685_-\|phage-late-control-D-family-protein	unknown	unknown	gnl\|CDD\|226031
NZ_QZDG01000035.1\|WP_010286901.1\|70540_70888_-\|baseplate-protein	unknown	unknown	gnl\|CDD\|226155
NZ_QZDG01000035.1\|WP_157765228.1\|66893_67049_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_QZDG01000035.1\|WP_039287146.1\|63667_65536_-\|peptidase-M3	gnl\|CDD\|224086	COG1164, COG1164, Oligoendopeptidase F [Amino acid transport and metabolism].	1.83143e-26
NZ_QZDG01000035.1\|WP_119870444.1\|69446_70550_-\|baseplate-protein	gnl\|CDD\|226457	COG3948, COG3948, Phage-related baseplate assembly protein [General function prediction only].	5.43419e-80
NZ_QZDG01000035.1\|WP_039527428.1\|72874_73804_-\|phage-tail-protein	gnl\|CDD\|377754	pfam06995, Phage_P2_GpU, Phage P2 GpU. This family consists of several bacterial and phage proteins of around 130 residues in length which seem to be related to the bacteriophage P2 GpU protein, which is thought to be involved in tail assembly.	8.74255e-44
NZ_QZDG01000035.1\|WP_119870442.1\|79392_79860_-\|hypothetical-protein	gnl\|CDD\|370600	pfam09646, Gp37, Gp37 protein. This protein of 154 residues consists of a unit of helices and beta sheets that crystallizes into a beautiful asymmetrical dodecameric barrel-structure, of two six-membered rings one on top of the other. It is expressed in bacteria but is of viral origin as it is found in phage BcepMu and is probably a pathogenesis factor.	3.84338e-60
NZ_QZDG01000035.1\|WP_014914964.1\|72672_72885_-\|membrane-protein	gnl\|CDD\|283209	pfam05489, Phage_tail_X, Phage Tail Protein X. This domain is found in a family of phage tail proteins. Visual analysis suggests that it is related to pfam01476 (personal obs: C Yeats). The functional annotation of family members further confirms this hypothesis.	8.20525e-09
NZ_QZDG01000035.1\|WP_100017067.1\|76904_77201_-\|2Fe-2S-iron-sulfur-cluster-binding-domain-containing-protein	gnl\|CDD\|177056	CHL00134, petF, ferredoxin; Validated.	4.96152e-34
NZ_QZDG01000035.1\|WP_119870445.1\|65622_66591_-\|DNA-binding-protein-YbiB	gnl\|CDD\|236160	PRK08136, PRK08136, glycosyl transferase family protein; Provisional.	0
NZ_QZDG01000035.1\|WP_039287185.1\|76444_76765_-\|phage-tail-assembly-protein	gnl\|CDD\|378397	pfam10109, Phage_TAC_7, Phage tail assembly chaperone proteins, E, or 41 or 14. This is family of various Myoviridae bacteriophage tail assembly chaperone, or TAC, proteins.	2.13218e-14
NZ_QZDG01000035.1\|WP_039509054.1\|70946_71528_-\|phage-baseplate-assembly-protein-V	gnl\|CDD\|226915	COG4540, gpV, Phage P2 baseplate assembly protein gpV [General function prediction only].	2.09883e-42
NZ_QZDG01000035.1\|WP_010281046.1\|77257_77782_-\|phage-major-tail-tube-protein	gnl\|CDD\|130672	TIGR01611, tail_tube, phage contractile tail tube protein, P2 family. The tails of some phage are contractile. This model represents the tail tube, or tail core, protein of the contractile tail of phage P2, and homologous proteins from additional phage. [Mobile and extrachromosomal element functions, Prophage functions].	2.27059e-79
NZ_QZDG01000035.1\|WP_010281043.1\|77781_79209_-\|tail-protein	gnl\|CDD\|164955	PHA02560, FI, major tail sheath protein; Provisional.	6.00057e-123
NZ_QZDG01000035.1\|WP_039519061.1\|71524_72685_-\|phage-late-control-D-family-protein	gnl\|CDD\|226031	COG3500, COG3500, Phage protein D [General function prediction only].	6.41917e-78
NZ_QZDG01000035.1\|WP_010286901.1\|70540_70888_-\|baseplate-protein	gnl\|CDD\|226155	COG3628, COG3628, Phage baseplate assembly protein W [General function prediction only].	1.07681e-32
NZ_QZDG01000035.1\|WP_014914969.1\|68872_69454_-\|phage-tail-protein-I	gnl\|CDD\|370616	pfam09684, Tail_P2_I, Phage tail protein (Tail_P2_I). These sequences represent the family of phage P2 protein I and related tail proteins from a number of temperate phage of Gram-negative bacteria.	6.10625e-26

>NZ_QZDG01000035.1|WP_039527428.1|72874_73804_-|phage-tail-protein
MFAVLGNIEFKVTAYWDGFNTSFGADYAEHGRIEGKPGLQFIGAKLDEITISLVFHKQYCTPDVELKRLTEAMRAHQAMALVFGNGDYRGWFVITALTSTSEHTDAKGNVLAMNASLTLREYIGDPKNPLKPPAIETPVPNVSAITTAVQKVSNFSASLRTAVTYAKKAHSAVKAARTTVQIVKRMKDNPETALLQIPGLLTQVGNVLTPLSQVEPAFKKVAEAISDTAVQAEKMMPEITAVNKAANEMLSQVKQVATLLQGVDSKNVIEKLEAISKHVEAASDTFKGAEPALSKLTAEIVKRVEAYAP
>NZ_QZDG01000035.1|WP_014914964.1|72672_72885_-|membrane-protein
MHLEHITTQGERWDTLSYLYYGDPLGYPRIIAANPHVPIVPLLPSGVVVLIPIIEQAEASKAEDTPPWLR
>NZ_QZDG01000035.1|WP_039519061.1|71524_72685_-|phage-late-control-D-family-protein
MAALTEELTLSSPAVSEVLQPAFTLWYLQKDITNDIAPYVTSVTYTDSIKNESDSIEVRLDDTDGRWMDQWYPGTGDTLSLKLGYLGEMLFDCGTFSIDEIEVSAPPSEVMIRGVATSVNRALRTKSNCGFEDTTLAAIATRIAKKHQLMLVGMIQIIKIDRVTQYAETDVAFLKRLASEYGYVVKVVSDQLIFSHLATLRNQASVRQIKPTDVARFSLSDTISHVYKNAKTKYQKGSEKKLVVCEADGGVNNEMKSAGAGTSADTLKVNVRAADASGARMKTDAALDAHNEKQQKGSMTLMGSPQLAAGNKVELVSFGQLSGHWLIESARHILDRSSGYTTEIGLIRGPITAGKRKSESGKTVVTYHPNGSSTTQKAKSKKGAVS
>NZ_QZDG01000035.1|WP_039509054.1|70946_71528_-|phage-baseplate-assembly-protein-V
MSLSRRIGTISAVDEARVMVRVRLPECDNLRTAWLPVLQRNTQNNKDYWLPDIGEQVEVLLDGNGEDGLVLGAIYSAVDVPTLTDKDKRAVTFADGAHIEYDRRTHTLTINGGVQHIAISSGADVVVNAQRVTINAPETTVTGKLLVQGQLTYESGMSGSGGASLSGDVSISGNVSASGSVMDAGGNSNHHSH
>NZ_QZDG01000035.1|WP_010286901.1|70540_70888_-|baseplate-protein
MKTQSVFWQPALQRSGDIVEGTADIMQAIHIILRTPCGSDPHRPDFGSNLHLYLDYPIDRAIPHVVRESVDAIKRWEPRCQLLAVKPSVNGAHLTLHVSWKTANGATQTTELLWR
>NZ_QZDG01000035.1|WP_119870444.1|69446_70550_-|baseplate-protein
MALTEPNFIERDAAKITAEMIAKYEADSGKTLYPAQAERLLINLFAYRETLLRSAVQEAAKQNLVAFARAPMLDYLAELVGVYRLAAQPARAELRFTPETPLVSDLLIPAGTRVSASDSVIFTTDSDALLRANGSGVTVLATCTESGDVGNDWLPAQISTLLDEIGDSDLSVINITKSSGGSAEEDDDRLRERVQLAPESFSTAGSKLAYRFHAMRAHQNIVDVAVMSPEPGEVVLYPLLSTGLPDSSILSLVESFCSDEQVRPLTDFVSAKSPTQVDYAISAKLTLFNGEQAAVVQAAAEKAVQAWVETRTATLGRDIVPSQIIATLSIPGVYQVELVSPSLMVLDDSEWANCTGINVSVIGVSNG
>NZ_QZDG01000035.1|WP_014914969.1|68872_69454_-|phage-tail-protein-I
MADSLQLLPPPLAADASFRSLAELADRFDDIDLNALLVYLIDITDGSVLPWLAEQFSLFGDGWELAESDDSKRALIKAAIDLHRSKGTPWSIKEIIRRFGFGDSTLIENIGRLSYDGETTYNNLYVYGDKAAWAVYRVLLKQPITNDQASMLRNAIGMLAPARCHLASIEYWAVPIRYNRTATYDSNYNHGSA
>NZ_QZDG01000035.1|WP_157765228.1|66893_67049_-|hypothetical-protein
MEPERQLILIGNETEGTRLATEDEIDAHKHSSNTFDVMAKQANEPIVKISQ
>NZ_QZDG01000035.1|WP_119870445.1|65622_66591_-|DNA-binding-protein-YbiB
MDYTKIIKEVGRGKNHARDVDQATAYELYSAMLRGDVPELELGGLLIAFRIKGESEAEMLGFYQAMNEHVLRLTPPAGFPMPIVLPSYNGARKQANLTPLLALLLAKLGFPVVVHGVSDDPTRVTSAEILRNLGVTIAENAEQAQQELDNGSPVFIPVSTLCPAIDRQLQLRWRMGVRNSSHTLAKVGTPFGESDALRVASVSHPEYVSLVGTFFNDINGRALLMHGTEGEVYANPQRCPEIHFIHQQNTKVLQLRQEISVAPDALPIAKDAATTARWTVQCLTGEIAIPQAIRLQLACCLVAAGEAATMEQAVATIKKRLG
>NZ_QZDG01000035.1|WP_039287146.1|63667_65536_-|peptidase-M3
MQQVADYFNALNRDYLAVHQAKEELFWQLYMGTGNDDVSERFSAAESAYKRFISQPQRLAELRTHLATLENSPRDEQQQALSHGLQGWYRFFDCNVIEDPQAQALMDEIITAESALYAKRKSYEMTHLDAKGERVSASLGELLTNQTTNDTEAYRQSSQQALRDLEQWLLQNGFPELISLRNRFARQMGYRNYFDYKVNKTERMTPEQLFAILDPFEEQTREANTRSLKNLADEKGEEALQPWNIRYASAGDVTRQLDPYFPFSASLERWINSFKRLRIGFNGAEMQLDLLVRKGKYENGFMHGPVPPFVQEGKWVPARINFTSLAKPDQIGSGASGINTLFHEGGHAAHFANIRQNAPCFSQEFPPTSMAYAETQSMFCDSLLGDADWLKRYAKNAQGETIPDELIRADISTQQPMRAFSERHILLVPYFEWQLYSWDDEARTPEAMTKLARDTEQRILGISGSPRPTLAIPHLLSMESACSYQGYLLALMAVEQTRSYFLQRDGYLTDNPAIGPDLAQHYWHPGNSVSHDDTLRSLTGEGFNPAYLAQACNLTVDEAWQQAEGMMAKAAARPQPAADFDLSARIRVVDGSRVLADNEQSDEKMCQDFAAFIEREYPRSQA
>NZ_QZDG01000035.1|WP_086002476.1|76356_76500_-|GpE-family-phage-tail-protein
MLWKAQALLARWFRFQPSEIDALELDDFEHWLDEASEQIKRENGEED
>NZ_QZDG01000035.1|WP_039287185.1|76444_76765_-|phage-tail-assembly-protein
MHTETYSLQFPYTTSAGQRVESISLKRLKVKDIKAVKKISDDPSNWDDALLSRMTGLVPEDIDEMDAQDYMALQKRFQQLLGLDNAAGAAVESAGPAGEVVSLSAE
>NZ_QZDG01000035.1|WP_100017067.1|76904_77201_-|2Fe-2S-iron-sulfur-cluster-binding-domain-containing-protein
MSAKVFDIIDLENNIHFQCREDVYILDAAEEAGFDLPYSSRAGADSASVARLISGQVDQSDQSYLDDEQIAAGFFLSDVAYPLSDCVVRFFAEDELPR
>NZ_QZDG01000035.1|WP_010281046.1|77257_77782_-|phage-major-tail-tube-protein
MAGKIEVNRITNANIYINGTNLLGRAQEIKLPDISMIMQEHKALGMVGKIELPAGFDKLEGEIKWNSFYREAMLAAANPYQSLALQCRSSVERYGSQGRIEEVPLVTHMTIMFKKNPLGTFKQHENPDFSSAFSCTYIKQVMNGEDLLELDYLSNIFMVGGVDQLNSYRANIGG
>NZ_QZDG01000035.1|WP_010281043.1|77781_79209_-|tail-protein
MAANYLHGVETIEVETGARPVKTVKSAVIGLIGTAPQGAVNDVTLCLSEKDAAQFGSQFGGYTIPQALDAIYDHGAGTVLVINVLDPAKHKSSVSAEKVTFDKATGTAQLANRVVAKVVLTAAEGGQPFVEGQDYTLDAQTGVLKNLGKNIDVTAVVSASYDFADVTKVTAADIIGSINAAGKRTGMKLLNDTYNLYGFFAKILISPVFCTQNSVTTELIALADKLGAIAYIDAPIGTTFAQALSGRGPEGTINFNTSSERARLCYPHVKVYDAETNSERLEPLSARAAGLRAKVDLDKGFWWSSSNQEIKGITGVERQLSAMIDDPQSEVNLLNEQGISTIFNSYGSGLRLWGNRTAAWPTVTHMKNFENVRRTGDVINESIRYFSQQYIDMPINQALIDALVESVNAYGRKLIGDGALLGFKCWFDAARNEQTELAAGHLLLNYKFTPPPPLERLTFETEITSEYLVTLEGTN
>NZ_QZDG01000035.1|WP_010281040.1|79198_79396_-|hypothetical-protein
MKYRYTGPASGVTLADGQEILLWPAQVTELPADHEYVKTLIALGYLLPVADQVLADSATEVTLGR
>NZ_QZDG01000035.1|WP_119870442.1|79392_79860_-|hypothetical-protein
MNTRPIIDAVIARLQQHLPARRIASCPENILSEPDRLTLGDVLVGYRGSEFSAPEDADSPVQTQRPQLMVAVLLPELDGEDGVLATLDTVRQALGGYRLPDCHRGIRLVRDRYVGYTEGRWHYAIDCTTETLFIEDREQTDGPLLTTVNYEEKDA
>NZ_QZDG01000035.1|WP_010281036.1|80092_80404_-|hypothetical-protein
MADTQRIRQESMRWHLLIALNKTRPYTANEMFLLALMQRLYADASEPELRHALDYLADRKMAVLTKAVGGVWLANLTRLGVDVVEYAVDGMVGIARPEKYWDR
>NZ_QZDG01000035.1|WP_010281034.1|80396_80726_-|hypothetical-protein
MKIEVEFWSLVGLLLSFMSFLFAAGRILLTQIEKRLNERFAALENARQKSEQGWTRLEREFLEFRADLPLIYVRREDYIRGQTVIEAKLDALYNKLELVQQRYSGGNHG
>NZ_QZDG01000035.1|WP_119870441.1|80715_81390_-|hypothetical-protein
MWNSLFLNSLKSFLSPRVVAVLLVVVLLLAVYLTGRHQGYQLAQALGDAELAKQQAAFNLLQQQQAETQNQLLRAAAEQYQQQVERGNQLEQRYVAARQKLAADNAALQRKIDHVTQQYIDEKGKVQPVQCVFTRGFVQHYNAAFGLSANGASDITAAARRTGAASALGATTNTELQPSGVSQRDILANISDNGERYQALSAQVNALLDYIDALQQAGEVTRED

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

68872 : 104722

Burkholderia_phage(31.58%)

plate,protease,tRNA,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014914969.1\|68872_69454_-\|tail	phage tail protein I	A4JWL7	Burkholderia_virus	3.1e-60	60.6
WP_119870444.1\|69446_70550_-\|plate	baseplate protein	Q6QI99	Burkholderia_phage	1.5e-103	54.6
WP_010286901.1\|70540_70888_-\|plate	baseplate protein	Q6QIA0	Burkholderia_phage	8.6e-34	63.0
WP_039509054.1\|70946_71528_-\|plate	phage baseplate assembly protein V	Q6QIA1	Burkholderia_phage	2.1e-24	45.6
WP_039519061.1\|71524_72685_-	phage late control D family protein	Q6QIA2	Burkholderia_phage	2.3e-83	47.8
WP_014914964.1\|72672_72885_-	membrane protein	A4JWL2	Burkholderia_virus	2.0e-17	58.6
WP_039527428.1\|72874_73804_-\|tail	phage tail protein	A4JWL1	Burkholderia_virus	2.1e-42	46.8
WP_119870443.1\|73803_76140_-\|tail	phage tail tape measure protein	R9TP54	Rhizobium_phage	2.2e-08	22.1
WP_086002476.1\|76356_76500_-\|tail	GpE family phage tail protein	NA	NA	NA	NA
WP_039287185.1\|76444_76765_-\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_100017067.1\|76904_77201_-	2Fe-2S iron-sulfur cluster binding domain-containing protein	V5UTY8	Synechococcus_phage	2.9e-22	63.8
WP_010281046.1\|77257_77782_-\|tail	phage major tail tube protein	Q6QIA9	Burkholderia_phage	1.6e-68	67.2
WP_010281043.1\|77781_79209_-\|tail	tail protein	A4JWK5	Burkholderia_virus	1.2e-203	73.4
WP_010281040.1\|79198_79396_-	hypothetical protein	NA	NA	NA	NA
WP_119870442.1\|79392_79860_-	hypothetical protein	Q6QIB2	Burkholderia_phage	1.4e-23	40.0
WP_010281036.1\|80092_80404_-	hypothetical protein	A0A2H4JGU5	uncultured_Caudovirales_phage	4.7e-23	52.5
WP_010281034.1\|80396_80726_-	hypothetical protein	Q5ZQY8	Pseudomonas_phage	1.5e-19	45.8
WP_119870441.1\|80715_81390_-	hypothetical protein	A0A0M5MTM9	Ralstonia_phage	1.3e-06	27.7
WP_039315950.1\|81379_81991_-	transglycosylase SLT domain-containing protein	J9SHG5	Pseudomonas_phage	8.8e-58	58.6
WP_010281025.1\|81992_82322_-	membrane protein	A4JWP3	Burkholderia_virus	1.2e-24	58.3
WP_119870440.1\|82561_83929_-	TolC family outer membrane protein	NA	NA	NA	NA
WP_039509045.1\|83931_85260_-	HlyD family type I secretion periplasmic adaptor subunit	NA	NA	NA	NA
WP_039509044.1\|85287_87015_-	type I secretion system permease/ATPase	W8CYL7	Bacillus_phage	8.7e-26	33.6
WP_010281012.1\|87032_87344_-\|protease	AprI/Inh family metalloprotease inhibitor	NA	NA	NA	NA
WP_039468759.1\|87449_88880_-\|protease	serralysin family metalloprotease	NA	NA	NA	NA
WP_039527409.1\|89400_91500_-	ATP-dependent DNA helicase DinG	A0A127AW80	Bacillus_phage	2.5e-43	25.6
WP_094371351.1\|91682_92528_+	AraC family transcriptional regulator	NA	NA	NA	NA
WP_119870439.1\|92580_93228_+	LysE family translocator	NA	NA	NA	NA
WP_039273042.1\|93516_94056_-	isopentenyl-diphosphate Delta-isomerase	NA	NA	NA	NA
WP_014914945.1\|94156_96463_-	beta-glucosidase BglX	NA	NA	NA	NA
WP_039468748.1\|96859_97546_+	glutathione S-transferase family protein	NA	NA	NA	NA
WP_014914943.1\|97623_98571_-	D-alanyl-D-alanine endopeptidase	NA	NA	NA	NA
WP_119870438.1\|98720_99230_-	hypothetical protein	NA	NA	NA	NA
WP_014914941.1\|99292_99649_-	FMN-binding protein	NA	NA	NA	NA
WP_014914940.1\|99709_100252_-	class IV adenylate cyclase	NA	NA	NA	NA
WP_039287236.1\|100683_101232_-	hypothetical protein	NA	NA	NA	NA
WP_119870437.1\|101248_102196_-	homocysteine S-methyltransferase	NA	NA	NA	NA
WP_039519018.1\|102188_103601_-	S-methylmethionine permease	NA	NA	NA	NA
WP_039468732.1\|103789_104722_-\|tRNA	tRNA dihydrouridine(16) synthase DusC	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_QZDG01000024

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_QZDG01000024_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_QZDG01000024_1

106072-106174

Orphan

Consensus_repeat	Method
TTTTTTATCGTGGGCTATCCCTGCCCACG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_QZDG01000024_1

>merge|NZ_QZDG01000024|1|106072-106174|CRISPRCasFinder
TTTTTTATCGTGGGCTATCCCTGCCCACGCCCCTTCGGGCCAACGCTACGCGTTGTTGAAAATTGCTCCTGCACTTTTTTATCGTGGGCTATCCCTGCCCACG

>NZ_QZDG01000024|1|1|106072-106174|CRISPRCasFinder
TTTTTTATCGTGGGCTATCCCTGCCCACG	CCCCTTCGGGCCAACGCTACGCGTTGTTGAAAATTGCTCCTGCAC
TTTTTTATCGTGGGCTATCCCTGCCCACG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_QZDG01000024.1\|WP_039282081.1\|126756_127308_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227296
NZ_QZDG01000024.1\|WP_119870609.1\|114539_124241_-\|beta-propeller-fold-lactonase-family-protein	unknown	unknown	gnl\|CDD\|378416
NZ_QZDG01000024.1\|WP_119870614.1\|100952_102914_+\|acetate--CoA-ligase	unknown	unknown	gnl\|CDD\|234677
NZ_QZDG01000024.1\|WP_010282272.1\|111739_112495_-\|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|273776
NZ_QZDG01000024.1\|WP_010295745.1\|103347_105006_+\|cation/acetate-symporter-ActP	unknown	unknown	gnl\|CDD\|236495
NZ_QZDG01000024.1\|WP_119870611.1\|108255_110385_-\|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|379183
NZ_QZDG01000024.1\|WP_119870612.1\|106213_107911_-\|rhamnogalacturonate-lyase	unknown	unknown	gnl\|CDD\|199907
NZ_QZDG01000024.1\|WP_039274271.1\|93727_94738_-\|AI-2E-family-transporter	unknown	unknown	gnl\|CDD\|223701
NZ_QZDG01000024.1\|WP_119870613.1\|105174_106071_+\|Rpn-family-recombination-promoting-nuclease/putative-transposase	unknown	unknown	gnl\|CDD\|368098
NZ_QZDG01000024.1\|WP_119870610.1\|112494_114285_-\|TolC-family-protein	unknown	unknown	gnl\|CDD\|224455
NZ_QZDG01000024.1\|WP_119870607.1\|126113_126764_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227296
NZ_QZDG01000024.1\|WP_119870618.1\|92107_93634_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|225121
NZ_QZDG01000024.1\|WP_119870606.1\|127307_128159_-\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|276809
NZ_QZDG01000024.1\|WP_104213439.1\|110387_111743_-\|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|273776
NZ_QZDG01000024.1\|WP_119870616.1\|95852_96377_-\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|171561
NZ_QZDG01000024.1\|WP_010282300.1\|99658_100051_-\|hypothetical-protein	unknown	unknown	unknown
NZ_QZDG01000024.1\|WP_010295748.1\|103039_103351_+\|DUF485-domain-containing-protein	unknown	unknown	gnl\|CDD\|225704
NZ_QZDG01000024.1\|WP_119870615.1\|96540_98934_-\|TonB-dependent-siderophore-receptor	unknown	unknown	gnl\|CDD\|237595
NZ_QZDG01000024.1\|WP_119870617.1\|94908_95856_-\|DUF4880-domain-containing-protein	unknown	unknown	gnl\|CDD\|236622
NZ_QZDG01000024.1\|WP_119870608.1\|124298_125918_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379164

Protein	Function_ID	Function_description	E-value
NZ_QZDG01000024.1\|WP_039282081.1\|126756_127308_-\|hypothetical-protein	gnl\|CDD\|227296	COG4961, TadG, Flp pilus assembly protein TadG [Intracellular trafficking and secretion].	0.00673746
NZ_QZDG01000024.1\|WP_119870609.1\|114539_124241_-\|beta-propeller-fold-lactonase-family-protein	gnl\|CDD\|378416	pfam10282, Lactonase, Lactonase, 7-bladed beta-propeller. This entry contains bacterial 6-phosphogluconolactonases (6PGL)YbhE-type (EC:3.1.1.31) which hydrolyze 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonising enzyme carboxy-cis,cis-muconate cyclase (EC:5.5.1.5) and muconate cycloisomerase (EC:5.5.1.1), which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold.	7.4298e-23
NZ_QZDG01000024.1\|WP_119870614.1\|100952_102914_+\|acetate--CoA-ligase	gnl\|CDD\|234677	PRK00174, PRK00174, acetyl-CoA synthetase; Provisional.	0
NZ_QZDG01000024.1\|WP_010282272.1\|111739_112495_-\|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|273776	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit. This model represents the MFP (membrane fusion protein) component of the RND family of transporters. RND refers to Resistance, Nodulation, and cell Division. It is, in part, a subfamily of pfam00529 (Pfam release 7.5) but hits substantial numbers of proteins missed by that model. The related HlyD secretion protein, for which pfam00529 is named, is outside the scope of this model. Attributed functions imply outward transport. These functions include nodulation, acriflavin resistance, heavy metal efflux, and multidrug resistance proteins. Most members of this family are found in Gram-negative bacteria. The proposed function of MFP proteins is to bring the inner and outer membranes together and enable transport to the outside of the outer membrane. Note, however, that a few members of this family are found in Gram-positive bacteria, where there is no outer membrane. [Transport and binding proteins, Unknown substrate].	3.74584e-29
NZ_QZDG01000024.1\|WP_010295745.1\|103347_105006_+\|cation/acetate-symporter-ActP	gnl\|CDD\|236495	PRK09395, actP, cation/acetate symporter ActP.	0
NZ_QZDG01000024.1\|WP_119870611.1\|108255_110385_-\|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|379183	pfam13437, HlyD_3, HlyD family secretion protein. This is a family of largely bacterial haemolysin translocator HlyD proteins.	9.24122e-19
NZ_QZDG01000024.1\|WP_119870612.1\|106213_107911_-\|rhamnogalacturonate-lyase	gnl\|CDD\|199907	cd10320, RGL4_N, N-terminal catalytic domain of rhamnogalacturonan lyase, a family 4 polysaccharide lyase. The rhamnogalacturonan lyase of the polysaccharide lyase family 4 (RGL4) is involved in the degradation of RG (rhamnogalacturonan) type-I, an important pectic plant cell wall polysaccharide, by cleaving the alpha-1,4 glycoside bond between L-rhamnose and D-galacturonic acids in the backbone of RG type-I through a beta-elimination reaction. RGL4 consists of three domains, an N-terminal catalytic domain, a middle domain with a FNIII type fold and a C-terminal domain with a jelly roll fold; the middle and C-terminal domains are both putative carbohydrate binding modules. There are two types of RG lyases, which both cleave the alpha-1,4 bonds of the RG-I main chain (RG chain) through the beta-elimination reaction, but belong to two structurally unrelated polysaccharide lyase (PL) families, 4 and 11.	8.37862e-86
NZ_QZDG01000024.1\|WP_039274271.1\|93727_94738_-\|AI-2E-family-transporter	gnl\|CDD\|223701	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only].	2.36988e-12
NZ_QZDG01000024.1\|WP_119870613.1\|105174_106071_+\|Rpn-family-recombination-promoting-nuclease/putative-transposase	gnl\|CDD\|368098	pfam04754, Transposase_31, Putative transposase, YhgA-like. This family of putative transposases includes the YhgA sequence from Escherichia coli and several prokaryotic homologs.	1.42095e-95
NZ_QZDG01000024.1\|WP_119870610.1\|112494_114285_-\|TolC-family-protein	gnl\|CDD\|224455	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion].	5.44638e-12
NZ_QZDG01000024.1\|WP_119870607.1\|126113_126764_-\|hypothetical-protein	gnl\|CDD\|227296	COG4961, TadG, Flp pilus assembly protein TadG [Intracellular trafficking and secretion].	0.00200313
NZ_QZDG01000024.1\|WP_119870618.1\|92107_93634_+\|MFS-transporter	gnl\|CDD\|225121	COG2211, MelB, Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism].	3.25787e-116
NZ_QZDG01000024.1\|WP_119870606.1\|127307_128159_-\|tetratricopeptide-repeat-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	2.3887e-12
NZ_QZDG01000024.1\|WP_104213439.1\|110387_111743_-\|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|273776	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit. This model represents the MFP (membrane fusion protein) component of the RND family of transporters. RND refers to Resistance, Nodulation, and cell Division. It is, in part, a subfamily of pfam00529 (Pfam release 7.5) but hits substantial numbers of proteins missed by that model. The related HlyD secretion protein, for which pfam00529 is named, is outside the scope of this model. Attributed functions imply outward transport. These functions include nodulation, acriflavin resistance, heavy metal efflux, and multidrug resistance proteins. Most members of this family are found in Gram-negative bacteria. The proposed function of MFP proteins is to bring the inner and outer membranes together and enable transport to the outside of the outer membrane. Note, however, that a few members of this family are found in Gram-positive bacteria, where there is no outer membrane. [Transport and binding proteins, Unknown substrate].	7.57593e-18
NZ_QZDG01000024.1\|WP_119870616.1\|95852_96377_-\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|171561	PRK12528, PRK12528, RNA polymerase sigma factor; Provisional.	6.85345e-54
NZ_QZDG01000024.1\|WP_010295748.1\|103039_103351_+\|DUF485-domain-containing-protein	gnl\|CDD\|225704	COG3162, COG3162, Predicted membrane protein [Function unknown].	1.3789e-44
NZ_QZDG01000024.1\|WP_119870615.1\|96540_98934_-\|TonB-dependent-siderophore-receptor	gnl\|CDD\|237595	PRK14050, PRK14050, TonB-dependent siderophore receptor.	3.40306e-141
NZ_QZDG01000024.1\|WP_119870617.1\|94908_95856_-\|DUF4880-domain-containing-protein	gnl\|CDD\|236622	PRK09774, PRK09774, fec operon regulator FecR; Reviewed.	3.38082e-56
NZ_QZDG01000024.1\|WP_119870608.1\|124298_125918_-\|hypothetical-protein	gnl\|CDD\|379164	pfam13400, Tad, Putative Flp pilus-assembly TadE/G-like. This is an N-terminal domain on a family of putative Flp pilus-assembly proteins. The exact function is not known. The Flp-pilus biogenesis genes include the Tad genes, and some members of this family are putatively assigned as being TadG.	6.3042e-05

>NZ_QZDG01000024.1|WP_119870613.1|105174_106071_+|Rpn-family-recombination-promoting-nuclease/putative-transposase
MQPHDAIFKQFLSDIDIARDFLAAHLPPAIQQQCDFSTLQLESASFIENTLRSRLSDMLYSLQTRSGSGYIYCVIEHQSRPDKLMAFRLLRYCLDAMQQHLSQGHQSLPVVIPLLFYHGKRSPYPYSMQWLDHFTDPPLAAQVYHHAFPLIDLTVIPDEEIKTHRRAALLELVQKHIRTRDMLELAHDIGLLFEHWNLSLPLRHALLLYVATVGNTSDIDRFIDSVAEPLSMHKEDTMTIAQQLHQRGFEQGMQEGMKSSALNIARQLLQNKMEQELVQRVTQLSDEEMTQLLRSEQK
>NZ_QZDG01000024.1|WP_010295745.1|103347_105006_+|cation/acetate-symporter-ActP
MKIRFMMLFGLLTLPVLAWAADALTGDVQRQPLNIQAIVMFLLFVGGTLYITYWASKKTRSRSDYYTAGGNITGFQNGLAIAGDYMSAASFLGISALVYTSGYDGLIYSLGFLVGWPIILFLIAERLRNLGRYTFADVASYRLQQRPIRSLSACGSLVVVALYLIAQMVGAGKLIELLFGLNYHIAVVLVGILMVMYVMFGGMLATTWVQIIKAVLLLFGATFMAVMVMKSVGFSFDTLFKQAMAVHPKGASIMSPGGLVSDPISALSLGLGLMFGTAGLPHILMRFFTVSDAKEARKSVFYATGFMGYFYFLTFIIGFGAILLVSANPAFKDATGALIGGNNMAAVHLADAVGGDFFLGFISAVAFATILAVVAGLTLAGASAVSHDLYSNVIKKGKATERDELKVSKITVLVLGVVAISLGILFENQNIAFMVGLAFSIAASCNFPIIIISMYWSKLTTRGAMIGGWAGLLTAVILMILGPTIWVKILGHATPIYPYDYPALFSMLVAFIGIWFFSITDRSEAGQQERARFHAQFVRSQTGVGASKGSSH
>NZ_QZDG01000024.1|WP_010295748.1|103039_103351_+|DUF485-domain-containing-protein
MNDAIYQRIESNPLFRELVNKRQRFAAFLSLIMLVLYVGFILLIAFAPGWLGTPIAPGSSITRGIPIGVGLIAISFILTGVYVYRANGEFDRLTKQLLDEVKQ
>NZ_QZDG01000024.1|WP_119870614.1|100952_102914_+|acetate--CoA-ligase
MTQHNKHAIPASIAENALINAQQYKNMYQLSVDDPDAFWGEQGKIVDWIKPYKTIKNTSFDPGHINIRWFEDGTLNVAANCLDRHLAERGDQTAIIWEGDDATESKKVTYRELHQSVCRFANVLKSQGVKKGDVVAIYMPMVPEAAVAMLACARVGAIHSVIFGGFSPEAISGRIIDSNAKLVITADEGVRAGRVIPLKKNIDEALKNPNVTTISSVIVFRRTGKIGEWQDGRDLWWHDLVEKADDHCPPEEMNAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAALTFKYVFDYHPGDIYWCTADVGWVTGHSYLLYGPLACGAITLMFEGVPTWPDASRMAQVVDKHKVNILYTAPTAIRALMAEGDKAIEGTSRESLRIMGSVGEPINPEAWEWYFNKIGNGKCPIVDTWWQTETGGFMITPLPGAIEPKAGSATRPFFGVQPALVDNLGNPQEGTAEGNLVIVDSWPGQARTLFGDHDRFEQTYFSTFKGMYFSGDGARRDEDGYYWITGRVDDVLNVSGHRLGTAEIESALVAHPKIAEAAVVGIPHHMKGQAIYAYITLNHGEEPSSELYTEVRNWVRKEIGPIATPDILHWTDSLPKTRSGKIMRRILRKIAAGDTSNLGDTSTLADPGVVEKLLEEKQAMSTASQ
>NZ_QZDG01000024.1|WP_010282300.1|99658_100051_-|hypothetical-protein
MSLIFGRNEILGMLSQPVQNDRRAVAVIDEKCKVVCANSAFNAHFGLRAEMNTPVSIDDVLPINVKFAYHDFMTNSNMLSTRVVSDLLSDGFTKKQLSTLSFSKLNVENRVLSLLILNQDAVEPSTNLAS
>NZ_QZDG01000024.1|WP_119870615.1|96540_98934_-|TonB-dependent-siderophore-receptor
MVKFRTHLLARTLRAGVLGASFASVLPMATAYAASAAPVQQYAVSSGPLNQVLNQFAQQAGVLLSYDPAVVAGKRGAGLQGNYSVEQGFQQILSNSGLSAQYSADGSVTLVQRTASDPVPVSAPVTAKNDRIVVTAPPNTAMKLDVPISETPRAVAVVTEKQIEERGAQKIDQALRYSSGILATPYGPDNKAEWVTIRGFSDQSRFQNGLATLNEDGFYGQQIEAFGVERIEVLKGPASVLYGQNPPGGLVNVITKRPTRLPQGKIELEYGSNDYRHLAVDSAGPLNDDGSVLYRVVALARDTSGEMDFSKSKRLYLAPSVTFLGEDTELTVLASYMDTKSDTTNGFKLPYGTLHGTPFGKVGYKTSLGEPGMNRHDTRQFTLGYEFTHHLNDTWTFHQNVNYTYLNLDLRNAYALGMYTDPVTNVVSDRLANRGLTYRDGFAQNWATDNRLVGEWQWEDIENTLLLGFDYRRANTQSRDGNLYSFGQPIDIFNPVYGNYTSPDSQLFAHRSGRHQTGYYVQNQIKYDERLIFLLGGRYDVAKSRDRNFSSGADTRTDDTKFTKTAGVMYLFDNGISPYVSYSESFLPVSGRDGYQRPYVPEEGQQTEMGVKYTPEGFNGYASAALFNLEQKNVKTTDPKNPNLTIQAGEARSRGLELEFSGEVYTGLTLTANYTYNEVETTKSGSVGEVGKRLPGLPEQIVSGWATYAFNGKLEGLSIGSGVRYVGSSYGDIANSADMKVPAYTLWDAMIAYDFSKDWRLQVNATNLTNREYVSACNYWCYYGEGRNVSANVSYRW
>NZ_QZDG01000024.1|WP_119870616.1|95852_96377_-|sigma-70-family-RNA-polymerase-sigma-factor
MKSPAAVCPNQPETLTVQQIYHDHHAWLQAWLRRRLGCSQQAADLAQDTFLRLICQHQTDLIREPRAWLTTVAHGLVVNHWRRKDIENAYLQVLAEQEFTFSPSLEQQAMVVDALMAIDQMLATLPGKVRQAFLLVHLDGLTYRQVAEQLAVSERMVKKYMAQAMLNCLLCQDL
>NZ_QZDG01000024.1|WP_119870617.1|94908_95856_-|DUF4880-domain-containing-protein
MISSITSSIPKDVLHAASEWYATLYDEDCSEHERQAWQRWLHQDDTHRLAWQQVEQIHARFHAVDSQLASSVLSKRGGERRRMLKLLAIASLTGGVGFSLPWESYAADYHTGTGETRELDIETGMTVWLNTDSALNQQGNPALSQPLTFQLLKGELMLDNRTAHAARLTTPHGDLAASAHSCQLALRYTSAHSVLSVFSGEVLLQTAVPAAQRVTAGQQVIFTRDRSSEPAPVENFRQSWRKGQLVADNMPLGQLVNEIARYHHGYFHVDSAVAMLRISGVFPLHETDRLLDAITRTLPVKVTRRFSWWVDIRPS
>NZ_QZDG01000024.1|WP_039274271.1|93727_94738_-|AI-2E-family-transporter
MQLLNLKQARLLSFFFIMGGLLILLPLRLLACFIAGFLVYEIVNLLTPYFQRVISGKRARWIVVAVISTLVVSLLSLLFGSLVGLLMQEMKDTAAFNVRIGYILNDIQQQIVHYLPGYLPVSIEELQHELLQWVQAHIVMLQNMGKSFLHGFVTMLIGMVLGAIVSLYNVDKDTEKPLLKAELLRRVSLLSASFRNIVFAQVKISAVNTVLSAIFILGALPLCGVHLPFAKTLVVLTFVFGLLPVIGNLISNSIVFLSGLSLSLPIALVALVYLMLIHKFEYFLNAQIVGTRIKAHAWEILLAMLVFEAAFGLSGVIAAPIYYAYLKSELKEAALI
>NZ_QZDG01000024.1|WP_119870618.1|92107_93634_+|MFS-transporter
MNKPISFKHTFCYGSANLLGSGALAISGAWLMYFYTTFCGLTLVQAAAIFSVASIIDAISNPIMGYISDNFYNTQVGRRFGRRRFFILLGVPLVLVYPMLWVEGFGFWYYLATYVLFELIYTSIMVPYETLATEMTSDFKLRSKLTGSKAIFGKIANFLAAFIPGQFIAIYGKDSATPFFYTGLVYGAIMCAAMIALYMTSWERPVNEIVRESTSGLWQAMKKLSVDMVSTFRLRIFRKHLGMYLFGFGAEWLFASAFTYFIVFGLKQNTALVSHLNSFSSIMQLISTAAFIGICVKMGFARPFRLALMVVIVSVMAYAALYFANWSEDMTIFVLFAITAVFGLSTGGIYYIPWTVYTFLADVDEVLTGRRREGIYAGAMTFAGKMVRSVIVFAMGWTLSQFGFVSGQSVQPETAVQAIVGVFSLGVIGLALVAIYYTTQMKLDRKNHAILLEEIARIKAGGAIADVPAHARAVAEELTGWEYEKCWGNNPLGVQSEEAKPQVATAQH
>NZ_QZDG01000024.1|WP_119870612.1|106213_107911_-|rhamnogalacturonate-lyase
MLAPYSYSAQDNAVSLSVSGLNTVLDNGLLKVAFGDDGSAVSMVTGGKNIVTNLSGAVRDPSKTRSAYLDYYINDAHAKGVKDFVPERVEVLRNDRDMVHVAYIDDRDGLLRLEYHLIMRRGVSGLYSYVVAENSGNQDVKVSELRNVYRFDPARLDHLYNGDRQGKPLLYSQLEASPKVQDETWRLPDGSIYSKYDFAGYMRAAPFWGVFGNGVGAWLIHGNREYFSGDALKQDLLVHQDAIILNYMTGSHFGTPDMVAPPGWKKFYGPWLLYINQGDTGHMLADAQRQALTETVSWPYKWVNDSRYARERTQVSGRVASQQPVTVVLSSSLDEPFDVQTRGYSYQATTDAQGNFALSHVRPGNYHLAVYANSGTQPGILAEQTLSVSGDKQVLPVIALPKAEPVVWAIGQANRQASEFRFGNEARNTRWQHEVPANLTFDIGRSDYQRDWYYAQTKPGKWDIRFALQPEKKTYFLNIALAAASNSGMSEPTMPQLAVAVNGTTLETLTYANDKTIYRGALQSGRYHIARIPVSSRFLKNGDNTITLQLKGGSVMYDVVTLSEE
>NZ_QZDG01000024.1|WP_119870611.1|108255_110385_-|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit
MAGGATPAAGLSPLRDELILHAGPANRDGSPSWTLEDPLRGLYFRIGWAEMAMLSRWSMGNAAQIVADVNQTSALMLDDSDVQYFNRFLQANSLTRVSGDEALAQFSRQVEQSRVSIWRKLLKNYLFFRIPLWHPDRFLGATLPWVEPFFSRTFLKLTLLVAVLGLFLAGRQWETFKHTFLHFFTLEGAALAGLTLCFTKILHEFGHAYTCKRFGARVATMGVAFLVMMPVLYTDTSGSWKLTRRRQRMAIGAAGMMTELVLAAWATLAWSFLPDGMLRSAAFMLATTTWIMTLAINLSPLMRFDGYFLLSDGLQMPNLQNRGFAIGRWQMREWLFGLGDAPPEHFPCWLQRTLVGYAFAVWIYRFFLFTGIAILVYHMTFKLLGMLLFAIEIGYFVVMPVVNEVREWSKRRKDYRMNRNMTTTLVVSAVVLLLLMIPWQRGVYAPALLRTEQQSSLYMPVPAMIQRIDVKIGEPVQAGQTLFMLSSDALEHEQKQLERQIATLSWQSTFQVFNKEAAGDHQRVKQEHEAALQKLQVLQRQSEQLTVRAPIDGVVADMITPLETGEWLGQGEWLAVVTKPTGGLVEAFVSEKDWQRLRTGAKGTFYLQDVSRSSLPLTIVEIASTATRDLNAAPELASSYGGDIATLSDSQRKLHPEQAVYRVLLSLPDDYRAQPQVLRGTVVMDGEAQSLLIRGWKVVSAVLIRELSF
>NZ_QZDG01000024.1|WP_104213439.1|110387_111743_-|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit
MTERNTTVAQTEQDTRLALLAELLQLQSRARARETLDELAFFIVNETHNVVKYRQALLWDCDKRRLQAASGLASLDHNAPFCTEFSRLCSQWQEEGRQTQTLQCRELPADDQILWQEHLPEFLLWLPLRLPQGDTPLVLVLARDSAWLPAEIVLLEKLADAYAHAWSSLCKVRRRPSKTPPARRRLIVAAIVALVLILLIPVRQSVLAPAEIVAHRPVMVRAPVAGVVDDILVRPNQTVSANQPLVRLDVRELENRLESARQAFATADAQYRQAQQQALFDANSKASLAVLQSRREQAQSEMDFLQRQQERMQLASPRDGVAIFDDSSDWIGRSVAVGERIMMIADPHDVELEIQLPAADAIALENGADVRLFLNVAPNSAQEARLEQIGYRAAPTPDNVMAYRLRARFTQDDPQLRVGLKGTAKLYGKRTVLFVYLLRKPLASLRVWLGV
>NZ_QZDG01000024.1|WP_010282272.1|111739_112495_-|efflux-RND-transporter-periplasmic-adaptor-subunit
MAFGMMRPLLLVSALGLPLLGQAATTGDIRVQLSAQRYTVLSSEIAGKVTDIAVKEGEHFKQGDTLVTFDCTVLREKLNYSNAAENAARKKLAIADRLDKLNSISLSDVDQARSSVSMAQAESGVNRAMLQRCVIKAPFSGRVTETKVKRWESVPEGKELLAIYDDSAFELEMIVPSRWLVWLKQGSAFQVVLDETGLSYPAEISRLSSAIDPVSQSVKVFGRITQSTAGLLPGMSGVAQIVPPDAGSVSP
>NZ_QZDG01000024.1|WP_119870610.1|112494_114285_-|TolC-family-protein
MNQHIAHFWDSQQHDSQQQNVQHEATPRTAGSRALRIAVTLACLGLAGCAVKPEPVTIEQQVAQALSDRTQMFANQEPVRGTITLDEAIARALKYNLQQRVALLEQAMEDDLLGVQNLDMLLPKLTARAGLQTRDNVAGSSSENIATGQPSLVPSTSQDQTQRTADLTMSWNVLDFGISYFNAKVQANKSLAAEERRRRVVADITRQVRTAYWEAATAQRLQPEVTTALTQARQALEYARQTEQQRLLAPVEALRFQKNMLEMVRQLEIVDSDLVVAKSRLAALMNLPPSSKYDVVVPSESSLVAPKMAYSLDDLENFSMVKRPEVREESYLARNSVLETRKSLLRLLPGVSLFAGINGDSNSYLVNHQWANAGVQVSGNLLNVLSWSSVKRAGQANEDLAEVRRQALRMAVLTQVNVAWQEYQQSTQMFGRYQELARIQRGILNQTTLSVQHRAETQMEQVRVSTETILTTRARDRSFADVQNALGAVYQAAGLDVLPDNVSDVSLAALSSSIARTTGNLEKGGVTVPRLSLATPATPATTTASTKTASTPSSAPVSKPIASSVATSSASAGKPYRVVNTDMWDNLQSLQAGGSR
>NZ_QZDG01000024.1|WP_119870609.1|114539_124241_-|beta-propeller-fold-lactonase-family-protein
MTFSRSKSGSGLTRTPRQAWVLEPRMMFDAAAVATVADVAAQVVVATDTAPGVDATPTKATVTITDTSDSFPAVDLFSDVSVSAGKDGQELKDLVITVNRTGANQALVIDGTEITLESGNGAKTTVGAGQYSYTVAVSGATTTVTVSIASSEAFEPTDVAKLIDGIAYKPLDNTVAGGDVVVTLKSLSDEGGDDTDTADLNIHATVTIDSKINVAPVVSASDAPELAELIIVPGMESPQDVRYSSTGDYAYSIGSDGTLGVFTVGEHGKLTLSQTLSGISALKDVKEVVLSADNRSLYAVSGNSNIVALSLDSNGQVVRLSGSAEQPEYTRTIAAQNGNITGLAVSGDGTQVYIATQWNGMVIFTRDATTGDLTFLQRVNDSGIDRSGIVASSGNYVVTIGMGAKHTLSIFQRGEDGTLTSVATLETSGEGYGAVDYQLAISKDQQFIYIADPDSGEISVYQLRDGTDGKTLVHTDTKTLEGVNALYLNADGSQLYALSSEGALQIYSVNVSTGALRESGQIKDIGDTRGMVLSPDGQSLLIAGETIQRFSALRTYLYGSDLPFADHIALSDSNLDVLNGGAGNYNGAVVTIGREAPSADDQFGFSTGNNLTLQDGKILQSGTEIGTFTQNQGVLSVTFTADVTKETANNVLKQITYRNVGSQSSAETVMLAVTANDGELNSTVTTVALLLTANSAPTLVSQGGNNLTLDTRGGSVTLFKDTAINTGEAGQALTKLSIGIDGLNNPHQEYLTMDGTVIDLSKDSAGTTVSGYQYTYTYNALSGESSLVLSSVQGISSMAMMKLIDGLSYSAGKESTSANGVRTITLTELQDNGGTANGGSDTATLTISGSVNLALNDAPAIEATYSPDATLFYNAGTLSGYNERVSAISVSQDGKTLLVTGSEGDNNSGKTYLRVYARDAETGKLTLLQSFTQGEQDDPSTPAIEVNGLNTITTLVQSKDGTSVYVAGGSGSAYSLVQFTRDATTGQLSYVGVVATQGMNGVSGLDAAVSEIVLSEDGTSLYTINGVTPTDGSTTKNAVVFFSRDTTSGALTFVGSLIGSDTIPVRSPSGIVLSSDGTSAYISNLGNNSITVLSRDAETGALDYVTTINKSTIAADTNSAEIPQDDRYLNGLQDIVISPDNRFVYVSSNSQGTVSIFSRDVDTGALTYAGTLNLYSAGHIPANALALRELVMSEDGSALYVAAFGSKSLLVFGRDSDSGALTYRNSVELSVNTVNHLAVSADGKNIYAGVSTFFAGLNVLTAAAHAPYSQTADMPFATSVTLSDPELDAADDYEGATITVSRNGDASANDHFAFQDGDDLTLAGSSIQYQGATIATFNVSEGAVTIVFTESVTKTVVNQVLHQVTYRNEGDTAGSSIPLKVTFSDGAKETSLLLTLVPNKPPVVDNVEYVPPSATAGQSYTAELPENLFRDPENGALTLQVNGLPAGLTFDPDTRTISGTPALNGAGSFAITVVASDASGEQSEQTLTLSIASDPAQVPTIGGESSALQNVGTLDGYDSNSYVDVLNGVKDSELSADGKTLYVVSSPESGSAVLSVFVRDAEGKFTLSKTFFNYRSVYNEETEQNDEVVDHAGLAGASDVTLSSDGQYLYVIGSEGNAVTLFRVGSDGELTQAGVLDQAELGGRSLDVRSQIVSQGDYLYVTAAQPNSNIDDSRSVLVFKREADGKLTSVSQAADNLIGASRLVLDPTGRYLFVSGSGSTVGVTAFSVDEQGALAQVGQISGTSEYYINGLALSPDGKTLYAIHADVGNYTLNTIAVGANGLLTLVSTEPFADDGGDSGEALASNLVVSADGTALFVIGKNITIFSRAEDGSLTLKQTISSGWDSSLGISFSSLQNIELSADGKQLYLVGGDKIHVLNVGTAGATYTEGNDATVLLPSGRLSDPQLDALNNGVGDYNGATITVGRQEGGQPEDTFGLKADNGLTLDGDTILKGGVAIATFTQVDGVLTVTFTASVTQADAQNVLRQITYQNTSQDPEQAGSSPAFTFSMNDGDNNTTSMDITVNLIGVNDPSTLTTTVLNPQIPGNGEFVKLFKDTHVDTIESGQTIWQVVLTFDVSGPNETISVDGSTIVLEKSNGTPRTASGLQYSVDVKDGKATVLLYVGRDASGTAAIIDSIGYNYLGSNPSGERHVTLMIKENNYNGTAPETKLDQAITLTLVPAAEANTAPVITIPGTTPTYTERADPIVLAPDATVSDAQMDKLNGGKGNYDGATLKITLGDGKTALDKLGFSAENGLTLSGDTLQKDGVTIGQVSNQDGVLTIRFNANAGTIPTTEDVQNTLRQITYASDSRTPAAQVAVTVTLSDRYLDSQVTALSVAITAINDTPVVANDPVLSADELRLVNTYTAISGLGTVTAAARTTDGLAVYVSDDKGAIALFQRDANSGELTYVRTFAAAEGVTGISQLQVSAEGNSVYALRADGNAIVWFSRDENGELTHKATIASDYDIDNGNLNNIKGIALSDDGKNLYLINSYSDQLAYFSRDTATGALTYVEALGGDMNNPPYLWAPTSILSRGNLLFVTTAINDTSTVIVYQRDDSGKLTPLGHVRDFTDAADNTVQLSGLEQITVSADGRSIFVANAEHIDAFTLDTATGAFTHIARVAAEGTVSDIALSADARVLYVTQSDGALTRYVLNDQTLTKLDTLKNAGTSFAHLLPVDGGLIALGNGVSVLDEVSRLPVYRVDSPAIIVAPSIVLSDAELDALNGGAGNYQGASITLQRGETASAGDRFDFAAGNGFTLANGVISKDGQAVATFTQADGKLTVTFTAAISRADATALARQISWATSAPLTGNATSLTLVLNDGAADSAAQALGVTLSREVNLPPMGHAEQFTPPSAQAGTRWSYTLPGTLFTDPENNALTFTVNDAQLPDGVRFDSATRTFSGTPSAAGVFNLTITATDSAGNATAMNVALTVNAASTPVDPGTPTEPVNPDNTATAAPVILVQQGVSLPADSGEREREQPLGTIVADLSRPEAQPLPNNIVTESVRQRDADTARQSDAPWVLDPVMSSLMPTLEQVNFSSRAEASTRDNAALRPADSNLFLSVRGQTTALESAFSSVQGALQPDASGTLAFSLPQRMFSVREGNATLTLQLANGRPLPAWVQFDARNGVVRITDASAVQVNQIQLALKAQAADGTSRIVPITLQTGQGDGAEMATDRGAMQLPAHSDALPAENRDAEQLAPAGKTAFTEQLRQHQPEQEALLAALSELSSLRT
>NZ_QZDG01000024.1|WP_119870608.1|124298_125918_-|hypothetical-protein
MKKTLQNRRVKKDATGITLFWRERLPAFIQEEKGAGTGFYALGAMALLVTAAFIVDTSTATGDATQIKRATDAAALAVGHQATINGEEYSQEETNKLAYDYVKNNLGMNKALSEKLEVGDVAVTEGRNSETRKTYTVTVAFETKPSLLSLGARKQEVFSTAEVINRPTEVAFVMPVTGDMSEGDIRSLKSVSRSFVERMLSSADGKRDNLWLSLVPYSQSVSVYDAADANRIRRWSAPGALNPPELRSLFASGVVSSMADRRFPDRRANLLCMYRGLGREENFFWDEPPVGQFKVYYRHDLPQNGSPGAPPISWRGPNPDFDDTDAVDTRWIVADRGCPNAALMPLTNEESKLNQRIDQFSARFNVNYAIGMSWAGAALSPNMRGSDGWGDATLPLDFNLDGNGDGQKVIVMLANTIGNWFDTDGYNFNRNAFSGQTGTDPARTFAAQRFRDLCSSFRARNIKFYFVGIRPGDPEDFGRNLFDAEATPGLLICTEGEKRMSFIDGAGFGAEGVEDQLIRRLDRIAGQIETEGGYVRLVE
>NZ_QZDG01000024.1|WP_119870607.1|126113_126764_-|hypothetical-protein
MTERLLKTSRLLKLSLLLKTSRFLSGMRRFWLSRRASTAVETALAFPIVLAIGALCADIYTVGLERTRMEQRAGAIASILAMQQKLDDSGLQGLLDTVLPTEGLGNYQLLISNVRQTGELHWQLSRGTAEALCAESETLPGEEYLPELPERDREEGSKNISMIVVEICRQGKDVGLLGGLSLGGLLHASSVNRVAVDVVELDEVLRKEAGLEEKEQ
>NZ_QZDG01000024.1|WP_039282081.1|126756_127308_-|hypothetical-protein
MAWFRNLGPWRGDGSIVPRHERHWRSTRGVIATEVAFLVPVVLVGVMMLFELARIGLVIAAGSAALDKAVQAFRLDNLASDSAEQMGTRLKARMVEAGYGYLKEDDLTVSVLHFDNLSQLGGLTNGNGNQDNPNGEETTTLPVWSVTVQIKKAFITPLPEVLTLGDTFRYQYKHVFGTELRND
>NZ_QZDG01000024.1|WP_119870606.1|127307_128159_-|tetratricopeptide-repeat-protein
MVDLVAKLKRGAPMLALLIVSTVLAGCGSSMAIKGSKDEGLRLARLLRDQGRVEAATEVYARLDSRDALKGAEMLEYASVAALARSPQQTLELYGRARQALGGDTNKMTPEEALAVCLGMGRAQLALGRNAMAQTDFACALKAQPNDAGALNGMGVVMDASGKHAEARQLFEKALQINPADVAALNNLALSWLASGNADKAISLLRSVDDSNATGRLNLALAYLSGGKDDEARSALATIAQPQRIDGLIDELNQRLQQMQQDKSRGEALLLSSRQRLQLSTPE

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

23597 : 72704

Pectobacterium_phage(65.38%)

terminase,head,tail,holin,integrase,plate

attL 24468:24493|attR 72805:72830

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039281975.1\|23597_24080_+	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	3.0e-29	48.7
24468:24493	attL	NA	NA	NA	NA
WP_119870686.1\|24706_25276_-	hypothetical protein	H9C1B8	Pectobacterium_phage	2.5e-99	93.7
WP_119870685.1\|25287_27258_-\|tail	phage tail protein	H9C1B7	Pectobacterium_phage	0.0e+00	90.4
WP_119870684.1\|27316_28699_-	hypothetical protein	A0A2D2W7C0	Pectobacterium_phage	4.3e-92	39.7
WP_119870683.1\|28701_29610_-	DUF2612 domain-containing protein	H9C1B4	Pectobacterium_phage	3.8e-150	92.1
WP_119870682.1\|29602_30805_-\|plate	phage baseplate protein	H9C1B3	Pectobacterium_phage	2.0e-215	97.0
WP_119870681.1\|30804_31155_-	hypothetical protein	H9C1B2	Pectobacterium_phage	4.3e-57	94.0
WP_119870680.1\|31211_31868_-	hypothetical protein	H9C1B1	Pectobacterium_phage	3.5e-113	92.7
WP_119870679.1\|31867_32755_-	hypothetical protein	H9C1B0	Pectobacterium_phage	2.3e-171	97.3
WP_016060804.1\|32747_33038_-	hypothetical protein	H9C1A9	Pectobacterium_phage	4.2e-50	100.0
WP_119870678.1\|33034_33679_-	hypothetical protein	H9C1A8	Pectobacterium_phage	7.8e-89	98.1
WP_119870677.1\|33681_35445_-	lysozyme	H9C1A7	Pectobacterium_phage	1.9e-299	92.2
WP_119870676.1\|35486_35870_+	hypothetical protein	NA	NA	NA	NA
WP_119870675.1\|36143_36545_-	hypothetical protein	H9C1A4	Pectobacterium_phage	2.3e-62	94.7
WP_119870674.1\|36547_36952_-	hypothetical protein	H9C1A3	Pectobacterium_phage	2.0e-66	94.8
WP_119870673.1\|36957_38112_-	DUF3383 family protein	H9C1A2	Pectobacterium_phage	2.8e-206	94.8
WP_119870672.1\|38120_38645_-	hypothetical protein	H9C1A1	Pectobacterium_phage	2.8e-92	96.0
WP_119870671.1\|38644_39067_-	hypothetical protein	H9C1A0	Pectobacterium_phage	5.9e-77	94.3
WP_119870670.1\|39069_39657_-	hypothetical protein	H9C199	Pectobacterium_phage	1.9e-57	64.1
WP_119870669.1\|39653_40076_-	DUF4054 domain-containing protein	H9C198	Pectobacterium_phage	3.7e-63	87.1
WP_119870690.1\|40105_40564_-	hypothetical protein	H9C197	Pectobacterium_phage	9.0e-47	68.8
WP_119870668.1\|40553_41489_-	DUF2184 domain-containing protein	H9C196	Pectobacterium_phage	9.4e-144	79.1
WP_119870667.1\|41506_42019_-	hypothetical protein	H9C195	Pectobacterium_phage	7.9e-68	81.3
WP_119870666.1\|42018_43221_-	DUF2213 domain-containing protein	H9C194	Pectobacterium_phage	5.1e-166	91.4
WP_119870665.1\|43230_43980_-\|head	phage head morphogenesis protein	H9C193	Pectobacterium_phage	1.7e-132	98.0
WP_119870664.1\|44029_45421_-	DUF1073 domain-containing protein	H9C192	Pectobacterium_phage	6.4e-221	80.8
WP_119870663.1\|45423_47064_-\|terminase	phage terminase large subunit	H9C191	Pectobacterium_phage	0.0e+00	99.1
WP_119870662.1\|47296_48349_-\|terminase	terminase small subunit	Q6V7Q7	Burkholderia_virus	1.2e-41	41.3
WP_119870661.1\|48350_48629_-	hypothetical protein	NA	NA	NA	NA
WP_119870660.1\|48651_48906_-	DNA polymerase III subunit theta	H9C187	Pectobacterium_phage	3.6e-37	91.7
WP_119870658.1\|49206_49776_-	hypothetical protein	H9C185	Pectobacterium_phage	3.6e-61	73.3
WP_119870657.1\|49754_50303_-	lysozyme	Q71TF3	Escherichia_phage	1.2e-69	69.9
WP_119870656.1\|50299_50557_-\|holin	holin	K7P6H9	Enterobacteria_phage	6.0e-24	64.8
WP_119870655.1\|50674_51040_+	hypothetical protein	NA	NA	NA	NA
WP_119870654.1\|51047_51329_+	hypothetical protein	NA	NA	NA	NA
WP_119870653.1\|51344_51704_+	hypothetical protein	NA	NA	NA	NA
WP_119870652.1\|51712_51940_+	hypothetical protein	NA	NA	NA	NA
WP_119870651.1\|51926_52133_+	hypothetical protein	NA	NA	NA	NA
WP_119870650.1\|52132_52456_+	hypothetical protein	NA	NA	NA	NA
WP_119870649.1\|52497_53532_-	DNA cytosine methyltransferase	H9C177	Pectobacterium_phage	5.7e-190	95.0
WP_119870648.1\|53944_54550_-	hypothetical protein	H9C175	Pectobacterium_phage	1.2e-102	89.5
WP_119870647.1\|54546_54903_-	RusA family crossover junction endodeoxyribonuclease	K7P6W0	Enterobacteria_phage	7.7e-46	72.6
WP_119870646.1\|54899_55184_-	DUF1364 family protein	G8C7V5	Escherichia_phage	1.2e-38	80.6
WP_119870645.1\|55180_55774_-	DUF1367 family protein	H9C173	Pectobacterium_phage	1.8e-63	57.9
WP_119870644.1\|55843_56065_-	hypothetical protein	H6WRY6	Salmonella_phage	2.2e-19	62.5
WP_119870643.1\|56161_58102_-	DNA cytosine methyltransferase	H9C171	Pectobacterium_phage	7.5e-260	71.0
WP_119870642.1\|58098_58845_-	class I SAM-dependent methyltransferase	H9C170	Pectobacterium_phage	1.5e-80	88.2
WP_119870641.1\|58837_59182_-	hypothetical protein	NA	NA	NA	NA
WP_119870640.1\|59178_60111_-	hypothetical protein	A0A141GF13	Brucella_phage	2.2e-28	42.9
WP_119870639.1\|60107_60359_-	hypothetical protein	H9C169	Pectobacterium_phage	2.4e-38	94.0
WP_119870638.1\|60355_61315_-	hypothetical protein	H9C168	Pectobacterium_phage	3.3e-27	35.5
WP_158586002.1\|61311_61569_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_158586001.1\|61612_62140_-	replication protein	A0A0U2JGJ0	Escherichia_phage	4.2e-48	59.4
WP_119870636.1\|62048_63026_-	DUF1376 domain-containing protein	A0A0U2RT81	Escherichia_phage	1.0e-79	53.3
WP_119870635.1\|63025_63682_-	hypothetical protein	A0A077KCB2	Edwardsiella_phage	3.1e-77	59.2
WP_119870634.1\|63720_63945_-	hypothetical protein	NA	NA	NA	NA
WP_119870633.1\|63959_64520_-	hypothetical protein	M9NZI6	Enterobacteria_phage	8.7e-20	32.4
WP_119870632.1\|64522_64756_-	Cro/Cl family transcriptional regulator	H6WRX5	Salmonella_phage	9.5e-21	62.7
WP_119870688.1\|64878_65271_+	helix-turn-helix domain-containing protein	H6WRX4	Salmonella_phage	8.5e-38	63.4
WP_119870631.1\|65733_65922_+	DUF1482 family protein	NA	NA	NA	NA
WP_119870630.1\|66612_66891_+	DNA breaking-rejoining protein	H6WRX2	Salmonella_phage	4.2e-15	44.4
WP_119870629.1\|67031_70178_+	exodeoxyribonuclease	K7P6V4	Enterobacteria_phage	1.8e-250	49.6
WP_119870628.1\|70188_71301_+	recombinase RecT	K7PKR8	Enterobacteria_phage	1.5e-103	52.8
WP_119870626.1\|71516_72704_+\|integrase	site-specific integrase	I6PDJ1	Cronobacter_phage	1.1e-160	73.6
72805:72830	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr_ID: NZ_QZDG01000024.1|WP_119870655.1|50674_51040_+|hypothetical-protein

Click the colored protein region to show detailed information

Acr_ID: NZ_QZDG01000024.1|WP_119870654.1|51047_51329_+|hypothetical-protein

Click the colored protein region to show detailed information

Acr_ID: NZ_QZDG01000024.1|WP_119870653.1|51344_51704_+|hypothetical-protein

Click the colored protein region to show detailed information

Acr_ID: NZ_QZDG01000024.1|WP_119870652.1|51712_51940_+|hypothetical-protein

Click the colored protein region to show detailed information

Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_QZDG01000024.1|WP_119870655.1|50674_51040_+|hypothetical-protein

50674_51040_+

121 aa aa

AcrIF20.1

hit_Aca_id	identity	query_coverage	hit_coverage
anti_CRISPR3651\|WP_119870655.1\|AcrIF20.1\|I-F\|Verified\|Pectobacterium	1.0	1	1.0

23597-72704

NZ_QZDG01000024.1|WP_119870654.1|51047_51329_+|hypothetical-protein

51047_51329_+

93 aa aa

AcrIF19

hit_Aca_id	identity	query_coverage	hit_coverage
anti_CRISPR3650\|WP_119870654.1\|AcrIF19\|I-F\|Verified\|Pectobacterium	1.0	1	1.0

NZ_QZDG01000024.1_51926_52133_+

Protein_id	Hit_Aca_id	Identity	Query_coverage	Hit_coverage
NZ_QZDG01000024.1_51926_52133_+	WP_039558032.1	0.5	0.9117647058823529	0.95

23597-72704

NZ_QZDG01000024.1|WP_119870653.1|51344_51704_+|hypothetical-protein

51344_51704_+

119 aa aa

AcrIF17.1

hit_Aca_id	identity	query_coverage	hit_coverage
anti_CRISPR3647\|WP_102117861.1\|AcrIF17.1\|I-F\|Verified\|Pectobacterium-carotovorum-(Erwinia-carotovora)	0.7256637168141593	0.957983193277311	0.9741379310344828

NZ_QZDG01000024.1_51926_52133_+

Protein_id	Hit_Aca_id	Identity	Query_coverage	Hit_coverage
NZ_QZDG01000024.1_51926_52133_+	WP_039558032.1	0.5	0.9117647058823529	0.95

23597-72704

NZ_QZDG01000024.1|WP_119870652.1|51712_51940_+|hypothetical-protein

51712_51940_+

75 aa aa

NZ_QZDG01000024.1_51926_52133_+

Protein_id	Hit_Aca_id	Identity	Query_coverage	Hit_coverage
NZ_QZDG01000024.1_51926_52133_+	WP_039558032.1	0.5	0.9117647058823529	0.95

23597-72704

4. NZ_QZDG01000008

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_QZDG01000008_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_QZDG01000008_1

261969-262065

Orphan

Consensus_repeat	Method
TGTCCGTCACCCTGCGGGCCGTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_QZDG01000008_1

>merge|NZ_QZDG01000008|1|261969-262065|CRISPRCasFinder
TGTCCGTCACCCTGCGGGCCGTTGCTGCGCAACGTTGAAAAATGCTCCCGGCGTTTTTTTATGACGGACGTCCTTGTCCGTCACCCTGCGGGCCGTT

>NZ_QZDG01000008|1|1|261969-262065|CRISPRCasFinder
TGTCCGTCACCCTGCGGGCCGTT	GCTGCGCAACGTTGAAAAATGCTCCCGGCGTTTTTTTATGACGGACGTCCT
TGTCCGTCACCCTGCGGGCCGTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_QZDG01000008.1\|WP_119871158.1\|258355_259846_+\|altronate-dehydratase	unknown	unknown	gnl\|CDD\|377287
NZ_QZDG01000008.1\|WP_104212560.1\|269330_270800_+\|GGDEF-domain-containing-protein	unknown	unknown	gnl\|CDD\|143635
NZ_QZDG01000008.1\|WP_010282967.1\|262152_263106_-\|TerC-family-protein	unknown	unknown	gnl\|CDD\|274743
NZ_QZDG01000008.1\|WP_039282370.1\|252555_253332_-\|transcriptional-regulator-ExuR	unknown	unknown	gnl\|CDD\|183176
NZ_QZDG01000008.1\|WP_104212558.1\|273535_274924_-\|6-phospho-beta-glucosidase	unknown	unknown	gnl\|CDD\|182112
NZ_QZDG01000008.1\|WP_014914087.1\|268526_269015_+\|ATP-independent-periplasmic-protein-refolding-chaperone	unknown	unknown	gnl\|CDD\|182473
NZ_QZDG01000008.1\|WP_039555545.1\|256869_258336_+\|tagaturonate-reductase	unknown	unknown	gnl\|CDD\|235147
NZ_QZDG01000008.1\|WP_014914081.1\|259935_260466_+\|YgjV-family-protein	unknown	unknown	gnl\|CDD\|378474
NZ_QZDG01000008.1\|WP_014914090.1\|271549_273466_+\|PTS-transporter-subunit-EIIC	unknown	unknown	gnl\|CDD\|273919
NZ_QZDG01000008.1\|WP_039504343.1\|250972_251368_-\|EnvZ/OmpR-regulon-moderator-MzrA	unknown	unknown	gnl\|CDD\|236728
NZ_QZDG01000008.1\|WP_119871160.1\|264519_265659_+\|23S-rRNA-(guanine(1835)-N(2))-methyltransferase-RlmG	unknown	unknown	gnl\|CDD\|184963
NZ_QZDG01000008.1\|WP_119871159.1\|260549_261797_-\|serine/threonine-transporter-SstT	unknown	unknown	gnl\|CDD\|184190
NZ_QZDG01000008.1\|WP_119871157.1\|253541_254843_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|273326
NZ_QZDG01000008.1\|WP_104212559.1\|270870_271233_+\|DUF305-domain-containing-protein	unknown	unknown	gnl\|CDD\|226074
NZ_QZDG01000008.1\|WP_039504345.1\|255257_256667_+\|glucuronate-isomerase	unknown	unknown	gnl\|CDD\|376859
NZ_QZDG01000008.1\|WP_119871161.1\|265753_267829_-\|NADPH-dependent-2,4-dienoyl-CoA-reductase	unknown	unknown	gnl\|CDD\|239240
NZ_QZDG01000008.1\|WP_010282972.1\|268043_268340_+\|hypothetical-protein	unknown	unknown	unknown
NZ_QZDG01000008.1\|WP_014914076.1\|251370_252054_-\|DedA-family-protein	unknown	unknown	gnl\|CDD\|223659
NZ_QZDG01000008.1\|WP_104212563.1\|263359_264358_-\|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223745
NZ_QZDG01000008.1\|WP_119871156.1\|250562_250967_-\|DUF1090-domain-containing-protein	unknown	unknown	gnl\|CDD\|368932

Protein	Function_ID	Function_description	E-value
NZ_QZDG01000008.1\|WP_119871158.1\|258355_259846_+\|altronate-dehydratase	gnl\|CDD\|377287	pfam04295, GD_AH_C, D-galactarate dehydratase / Altronate hydrolase, C-terminus. Family members include the C termini of D-galactarate dehydratase (EC:4.2.1.42) which is thought to catalyze the reaction D-galactarate = 5-keto-4-deoxy-D-glucarate + H2O, and altronate hydrolase (altronic acid hydratase, EC:4.2.1.7), which catalyzes D-altronate = 2-keto-2-deoxygluconate + H2O. As purified, both enzymes are catalytically inactive in the absence of added Fe2+, Mn2+, and beta-mercaptoethanol. Synergistic activation of altronate hydrolase activity is seen in the presence of both iron and manganese ions, suggesting that the enzyme may have two ion binding sites. Mn2+ appears to be part of the enzyme active centre, but the function of the single bound Fe2+ ion is unknown. The hydratase has no Fe-S core.	0
NZ_QZDG01000008.1\|WP_104212560.1\|269330_270800_+\|GGDEF-domain-containing-protein	gnl\|CDD\|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	2.666e-56
NZ_QZDG01000008.1\|WP_010282967.1\|262152_263106_-\|TerC-family-protein	gnl\|CDD\|274743	TIGR03718, R_switched_Alx, integral membrane protein, TerC family. Rfam model RF00080 describes a structured RNA element called the yybP-ykoY leader, or SraF, which may precede one or several genes in a genome. Members of this highly hydrophobic protein family often are preceded by a yybP-ykoY leader, which may serve as a riboswitch. From the larger group of TerC homologs (pfam03741), this subfamily contains TerC itself from Alcaligenes sp. plasmid IncHI2 pMER610 and from Proteus mirabilis. It also contains the alkaline-inducible E. coli protein Alx, which unlike the two TerC examples is preceded by a yybP-ykoY leader.	1.36761e-141
NZ_QZDG01000008.1\|WP_039282370.1\|252555_253332_-\|transcriptional-regulator-ExuR	gnl\|CDD\|183176	PRK11523, PRK11523, transcriptional regulator ExuR.	0
NZ_QZDG01000008.1\|WP_104212558.1\|273535_274924_-\|6-phospho-beta-glucosidase	gnl\|CDD\|182112	PRK09852, PRK09852, cryptic 6-phospho-beta-glucosidase; Provisional.	0
NZ_QZDG01000008.1\|WP_014914087.1\|268526_269015_+\|ATP-independent-periplasmic-protein-refolding-chaperone	gnl\|CDD\|182473	PRK10455, PRK10455, periplasmic protein; Reviewed.	6.5976e-73
NZ_QZDG01000008.1\|WP_039555545.1\|256869_258336_+\|tagaturonate-reductase	gnl\|CDD\|235147	PRK03643, PRK03643, tagaturonate reductase.	0
NZ_QZDG01000008.1\|WP_014914081.1\|259935_260466_+\|YgjV-family-protein	gnl\|CDD\|378474	pfam10688, Imp-YgjV, Bacterial inner membrane protein. This is a family of inner membrane proteins. Many of the members are YgjV protein.	3.59127e-53
NZ_QZDG01000008.1\|WP_014914090.1\|271549_273466_+\|PTS-transporter-subunit-EIIC	gnl\|CDD\|273919	TIGR01995, beta-glucosides_PTS_EIIBCA, PTS system, beta-glucoside-specific IIABC component. This model represents a family of PTS enzyme II proteins in which all three domains are found in the same polypeptide chain and which appear to have a broad specificity for beta-glucosides including salicin (beta-D-glucose-1-salicylate) and arbutin (Hydroquinone-O-beta-D-glucopyranoside). These are distinct from the closely related sucrose-specific and trehalose-specific PTS transporters.	0
NZ_QZDG01000008.1\|WP_039504343.1\|250972_251368_-\|EnvZ/OmpR-regulon-moderator-MzrA	gnl\|CDD\|236728	PRK10629, PRK10629, EnvZ/OmpR regulon moderator MzrA.	6.67547e-47
NZ_QZDG01000008.1\|WP_119871160.1\|264519_265659_+\|23S-rRNA-(guanine(1835)-N(2))-methyltransferase-RlmG	gnl\|CDD\|184963	PRK15001, PRK15001, 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG.	0
NZ_QZDG01000008.1\|WP_119871159.1\|260549_261797_-\|serine/threonine-transporter-SstT	gnl\|CDD\|184190	PRK13628, PRK13628, serine/threonine transporter SstT; Provisional.	0
NZ_QZDG01000008.1\|WP_119871157.1\|253541_254843_-\|MFS-transporter	gnl\|CDD\|273326	TIGR00893, Probable_glucarate_transporter, D-galactonate transporter. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	1.12504e-119
NZ_QZDG01000008.1\|WP_104212559.1\|270870_271233_+\|DUF305-domain-containing-protein	gnl\|CDD\|226074	COG3544, COG3544, Uncharacterized protein conserved in bacteria [Function unknown].	2.17788e-23
NZ_QZDG01000008.1\|WP_039504345.1\|255257_256667_+\|glucuronate-isomerase	gnl\|CDD\|376859	pfam02614, UxaC, Glucuronate isomerase. This is a family of Glucuronate isomerases also known as D-glucuronate isomerase, uronic isomerase, uronate isomerase, or uronic acid isomerase, EC:5.3.1.12. This enzyme catalyzes the reactions: D-glucuronate <=> D-fructuronate and D-galacturonate <=> D-tagaturonate. It is not however clear where the experimental evidence for this functional assignment came from and thus this family has no literature reference.	0
NZ_QZDG01000008.1\|WP_119871161.1\|265753_267829_-\|NADPH-dependent-2,4-dienoyl-CoA-reductase	gnl\|CDD\|239240	cd02930, DCR_FMN, 2,4-dienoyl-CoA reductase (DCR) FMN-binding domain. DCR in E. coli is an iron-sulfur flavoenzyme which contains FMN, FAD, and a 4Fe-4S cluster. It is also a monomer, unlike that of its eukaryotic counterparts which form homotetramers and lack the flavin and iron-sulfur cofactors. Metabolism of unsaturated fatty acids requires auxiliary enzymes in addition to those used in b-oxidation. After a given number of cycles through the b-oxidation pathway, those unsaturated fatty acyl-CoAs with double bonds at even-numbered carbon positions contain 2-trans, 4-cis double bonds that can not be modified by enoyl-CoA hydratase. DCR utilizes NADPH to remove the C4-C5 double bond. DCR can catalyze the reduction of both natural fatty acids with cis double bonds, as well as substrates containing trans double bonds. The reaction is initiated by hybrid transfer from NADPH to FAD, which in turn transfers electrons, one at a time, to FMN via the 4Fe-4S cluster. The fully reduced FMN provides a hydrid ion to the C5 atom of substrate, and Tyr and His are proposed to form a catalytic dyad that protonates the C4 atom of the substrate and completes the reaction.	0
NZ_QZDG01000008.1\|WP_014914076.1\|251370_252054_-\|DedA-family-protein	gnl\|CDD\|223659	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown].	1.41925e-47
NZ_QZDG01000008.1\|WP_104212563.1\|263359_264358_-\|Gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	2.86048e-57
NZ_QZDG01000008.1\|WP_119871156.1\|250562_250967_-\|DUF1090-domain-containing-protein	gnl\|CDD\|368932	pfam06476, DUF1090, Protein of unknown function (DUF1090). This family consists of several bacterial proteins of unknown function and is known as YqjC in E. coli.	2.25711e-30

>NZ_QZDG01000008.1|WP_119871159.1|260549_261797_-|serine/threonine-transporter-SstT
METQYSRFLQYITHGSLVKQILLGLAAGIILASLSTQAALAAGLLGTLFVGALKAVAPILVLVLVMASIANHQQGQKTNIRPVLFLYLIGTFSAALIAVVLSVLFPSTLALNAQAADITPPSGIVEVLEGLLMSVIANPIHALLNANYIGILVWAVGLGIAFRHGSDSTKNMINDASNAVTMIVRVVIRFAPLGIFGLVASTLAETGFGALWGYAHLLMVLIGGMLLVALVVNPLIVYWKIRSNPYPLVLRCLRESGVTAFFTRSSAANIPVNMELCRKLNLDEDTYSVAIPLGATINMAGAAITITVLTLAAAHTLGIQIDVPTALLLSVVASLCACGASGVAGGSLLLIPLACSMFGISNDIAMQVVAVGFIIGVLQDSAETAVNSSTDVMFIAAVCHAEDAKLAEKERLNLL
>NZ_QZDG01000008.1|WP_014914081.1|259935_260466_+|YgjV-family-protein
MTHYWIAQSVGVLAFLVGITMFFNRNDQKFKIQLSAYSAVIGLHFFLMGANAAGASALLNSARTLISLKTHNILVMFVFISLTLLFGLSGMNHAMELLPIAGTVASTWALFRTSGLTTRCVMWCSTACWVAHNIWLGSIGGSLIEGSFLLMNGFNIIRFWRMQQRGIDPFSVENKA
>NZ_QZDG01000008.1|WP_119871158.1|258355_259846_+|altronate-dehydratase
MQSIIKIHSLDNVAVALRDVEQGETVSVDSHTVTLQQPVVRGHKFALETLAPGEMITKYGLPIGHALVSIAPGEHIHSQNAKTNLSDLDEYQYQPEFLELPPQMGDRDVQLYRRKNGDVGIRNELWILPTVGCVNGIARQIQQRFLKETNDAEGIDGVYLFSHTFGCSQLGQDHENTRTMLQNMVRHPNAGAVLVIGLGCENNQVDAFRTTLGDFDSDRVTFMVCQQQDDEVEAGLERLHTLYEAMRHDKREPGKLSELKFGLECGGSDGLSGITANPLLGRFSDYLIANGGTTVLTEVPEMFGAERILMSRCRDEATFEKTVHMVNDFKQYFIAHDQPIYENPSPGNKAGGITTLEEKSLGCTQKAGQSKVVDVLKYGERLHTPGLNLLSAPGNDAVATSALAGAGCHMVLFSTGRGTPYGGFVPTVKLATNSELAKKKPHWIDFDAGRLIHDMPMDELLSQFVELIVEIADGKRTKNEVNDFRELAIFKSGVTL
>NZ_QZDG01000008.1|WP_039555545.1|256869_258336_+|tagaturonate-reductase
MQTLNRRNFPGRQHPDRVIQFGEGNFLRAFVDWQLDLLNEHTDLDAGIVVVRPIDSDFPPALDTQDGLYTTIIRGLNEQGEAVREPRLIRSVNREINVYRQFDEYLALAHDPNIRFVFSNTTEAGISYHAEDRLNDAPPVSFPAKLTRLLYERFCHFDGAADKGWVLLPCELIDYNGVALKELVLRYAAQWKLTPTFTAWLNDHNTFCSTLVDRIVTGYPRAEVEALQQEMGYQDTFWDTAEHFYLFVIQGPQWLAEELRLNKLDLNVRIVDDIKPYKERKVAILNGAHTALVPVAFLAGLDTVGESMNDALIGKFVEKTIAEEIVPVLDLPHDELTSFAQAVLSRFRNPFIQHQLLSISLNGMTKFRTRILPQLLTYRERHGELPARLTFALAALIAFYRGERSGEGDALQTYPLQDDAHWLERYSTLWAGVKENTVSLAELVNVVLRDADHWEQDLTQVPGLAAQVTEQLQTIVERGMRAAVEGYC
>NZ_QZDG01000008.1|WP_039504345.1|255257_256667_+|glucuronate-isomerase
MPQFLSEDFLLDSEFARRLYHEYAVDQPIFDYHCHLPPEQIAENYRFKNLYDIWLKGDHYKWRAMRTNGVPERLCTGDASDWEKFEAWAATVPHTIGNPLYHWTHLELRRPFGITGTLLSPSTAKDIWDRCNAMLERDDFTARGIMQQMNVKMVGTTDDPIDDLRHHKTVAQDSSFSIKVLPSWRPDKAFNIELATFNDYMAKLGEVSDTDIRRFSDLQTALTKRLDHFAAHGCKVSDHALDVVMFAEADDATLDSILARRLAGETLSEHEVAQFKTGVLVWLGAEYARRGWVQQYHIGALRNNNLRQFKLLGPDVGFDSINDRPLAQELSRLLSKQNEENLLPKTILYCLNPRDNEVLGTMIGNFQGEGMPGKMQFGSGWWFNDQKDGMQRQMTQLAQLGLLSRFVGMLTDSRSFLSYTRHEYFRRILCQMIGRWVEDGEAPADLPLLGEMVKNICFDNAKNYFAIEL
>NZ_QZDG01000008.1|WP_119871157.1|253541_254843_-|MFS-transporter
MRKIKGLRWYMIGLVTIGTVLGYLTRNAISVAAPTLQDQLHITTQQYSYIVAAYSACYTIMQPIAGYVLDLLGTKIGYAMFAILWAIFCMGTALANSWGGLAIARGAVGMAEAAMIPAGLKASSEWFPAKERSVAVGYFNVGSSIGAMIAPPLVVWAIVAHSWEMAFIITGALSLIWAICWLIFYKHPKDQKKLSDEERNYILSGQEAQHQTNNAKKMSAWQILRNRQFWGIALPRFLAEPAWGTFNAWIPLFMFKAYGFNLKEIAMFAWMPMLFADIGCILGGYLPMLFQKYFKVNLIVSRKMVVTMGAVLMIAPGMIGLFSSPYVAIALLCVGGFAHQSLSGALITLSSDVFGRNEVATANGLTGMAAWMASTMFALVVGALADTLGFSPLFAALAVFDLLGAVVIWTVLKNQPASEVAATAETLKEANQH
>NZ_QZDG01000008.1|WP_039282370.1|252555_253332_-|transcriptional-regulator-ExuR
MALTEPRRLYQQLAAELKQRIESGMYQVGEKLPAERYISEEMNVSRTVVREAIIMLEVEGYVEVRKGSGIHVISNQQKNPFINSGDNEFVAAGPFELLQARQLIESNIAEFAATQVTRQDIIQLMEIQEYARQEDRFRDSQWDLKFHVQVALATQNSAMATIVEKMWSQRIHNPYWRKLHEHIDDKSIESWCEEHDRILKALIRKDPYAAKLAMWQHLENTKQMLFRATTDDFEFNVDRYMFAENPVVHLDQIHTGKS
>NZ_QZDG01000008.1|WP_014914076.1|251370_252054_-|DedA-family-protein
MELIKELLNALWHQDFDILADPKLVWTIYILLFLIIFLENGLLPAAFLPGDSLLILVGVLVAKGTMNYPFTIFLLTTAASLGCWASYIQGRWLGNTGVVQGWLSHLPAHYHQRAHQLFHRHGLSALLVGRFLAFVRTLLPTIAGLSGLNNARFQFFNWMSGFLWVFILVTLGFALGKTTVFLKYEDELMFCLMMLPLVLLFIGLFGSLFVLWRKKRDAKADNAEKGS
>NZ_QZDG01000008.1|WP_039504343.1|250972_251368_-|EnvZ/OmpR-regulon-moderator-MzrA
MSISGLFSKLFSRKAGRILLLLALPMIALTQSQSLRRSQDDAMLHIKPYDGAALPDGFYVYQRLNEKGIAIKSITPEQDSLIVRLASPEQSIAARDVLRLSLPKVTITAQQVTTPTPFWQQKLTQKQSKLG
>NZ_QZDG01000008.1|WP_119871156.1|250562_250967_-|DUF1090-domain-containing-protein
MKLSPSKLSPSIIALSVLLSSHALANTANQVETCQQKAQDIQRQIDEARKHGNQNRINGLEKALDGVKTHCTDAGLAEKRQEEIAEKRKDVAERQKELNESRQKGDDAEKILKRERKLAEAEQELRAAERGTSQ
>NZ_QZDG01000008.1|WP_010282967.1|262152_263106_-|TerC-family-protein
MHTIGTPWLWGSFAAIVIVMLAIDLLYQGRKGSTVMTFKQAAVWSIIWVTLSLLFNAGFWWYLDGTMGREVANAQSLAFLTGYLIEKALAVDNVFVWLMLFGYFAVPPQYQRRVLIYGVLGAIVLRTLMVFGGSWLVTQFQWLLYVFGAFLLFTGLKMALAKEDGGAIGDKPLVRWLRSRLRMTDSIENEKFFVRRNGILYATPLFLVLIMVEISDVIFAVDSIPAIFAVTTDPFIVLTSNLFAILGLRAMYFLLAGVAERFSLLKYGLAVILIFIGTKMMLIDIFHIPVAISLGVVASILVITMLINVWVNKRAER
>NZ_QZDG01000008.1|WP_104212563.1|263359_264358_-|Gfo/Idh/MocA-family-oxidoreductase
MIRFAIVGTSWITRQFVDAAHETGKLKLTAIYSRTAEKAQPFQADYMVDTLFDSLEAMAKSDLIDAVYLASPNSLHCEQALLFLSHGKHVICEKPLASNRYEVEQMIACARENQVVLFEAFKTASLPNFSVIQQALPKVGRLRKVVLNYCQYSSRYPLYLAGENPNTFNPAFSNGSIMDIGYYCLAFAVALWGEPCTTQASATLLESGVDAHGSIILNYGDFDVTIVHSKVSHSAIPSEIQGEDGSLVIEKVSECHNVKFIPREGKQVDLSQPQHINSMLYEAEVFATLVNDNDINHAELARSRTVAGLLTEIRRQTGVVFPADAATPGNAE
>NZ_QZDG01000008.1|WP_119871160.1|264519_265659_+|23S-rRNA-(guanine(1835)-N(2))-methyltransferase-RlmG
MSQLELETCNLTLVRYPQVAENSALQAWDAADEYLLRELATMEIAPGPRLIFNDAFGALACGLQAQSPVSISDSYLSQLATRHNLELNGYAVDAVTLLDSMAELPDAPALVVIKIPKTIALLEHQLRMLRKVVTPQTRIIAGAKARDIHTSTLQLFERVMGPTKTSLAWKKARLVHCEWAELKVSEQPLTTEWELDGYGYRIQNLANVYSRNGLDIGARFFMQHLPEQIDGKIIDLGCGNGVIGLAALKANPEATVGFFDESYMAVASSQTNVEVNCPQDVERCSFVVNHGLARVKRDTLQAVLCNPPFHQQQAVTDEIAWQMFMDARRCLQVGGELRIVGNRHLDYFHKLKRLFGNCETLASNTKFAVLRAVKTGSSR
>NZ_QZDG01000008.1|WP_119871161.1|265753_267829_-|NADPH-dependent-2,4-dienoyl-CoA-reductase
MTAYPTLLSPLDLGFTTLKNRVVMGSMHTGLEEHPDGTERLAAFYRERAQGGVGLIVTGGIAPNAKGAVAKGGATLHDEAQLAHHQVLTQAVHDAGGKIALQILHAGRYSYQPDPVAPSAIQAPINRFAPREMSTQDIVQTIDDFARCAALAQQAGYDGVEIMGSEGYLINQFLVTHTNHRDDEWGGDFQRRSRFALEIVRAVRERTGPDFILIYRLSMLDLIEEGSSWQEIVQLAQAIEQAGATLINTGIGWHEARIPTIATLVPRGAFGWVTQKLMGKVRIPLITTNRINDPGVAEQLLAEGCADMVSMARPFLADAELVAKAQSGRADEINTCIGCNQACLDQIFAGKVTSCLVNPRACHETELPIQPARVGKRFAVVGAGPAGMAFAVNAAARGHQVTLFESSSYIGGQFNIAKQIPGKAEFYETLRYYRRQLALLGVTLRLSTQATAADLLGFDDVILACGIVPRIPAIAGIDHPSVLSYLDVLRDKKPVGKRVAIIGAGGIGFDTAHYLLNNTHYLLNNNSLPNDSHRLNPQSSQAGHNDFYAEWGIDKQLQHRGGLLPQQPDALPHQRDITLLQRKTGKPGENLGKTTGWIHRTTLLRHGVTLLGGVEYHHIDDEGLHIIHDQQMRCLPVDNIIICAGQEPNRKLYDPLLAAGCHVHLIGGADVAQELDARRAIEQATRLALIL
>NZ_QZDG01000008.1|WP_010282972.1|268043_268340_+|hypothetical-protein
MRVEELEYRLDSALRALEQSVQRQQQTWRQEHQSLQQQLLQAKERDAYLCAQIERLSAQLSSMDSSPERNPLIQKMKVVHAHLDVLAQEASAFRRSLR
>NZ_QZDG01000008.1|WP_014914087.1|268526_269015_+|ATP-independent-periplasmic-protein-refolding-chaperone
MRKLTAMLVASSLALGAAGIAHANDAPKGPGPEHKMMMKEGREHRGMMGPDAMFKELNLTEAQKQQIKDIMKESREKMHKAMQDDRRDMHSLVASDTFDAAKAQAQLDKADAAHKARMLNGLETKNKIYNVLTPEQKKQYNDNFEKRLTQPPKPDGKPVPAE
>NZ_QZDG01000008.1|WP_104212560.1|269330_270800_+|GGDEF-domain-containing-protein
MNHDLTLKTIKFMPLLFLTTLIVSCMGFRFRVLDELSLFWPANILVFCLMISFRARKGTITGKTLFICSGFLVSYVAMLSAALLMDNNSPLKTKVLLCLCNMVFVVTAWCAFFLMCRFTGKWSTFEKFTKYYVYIIFASTFVGAFLSGVAYGVYAYVYDTGNRYAEFMDWFSEQLGTGIILAFFFLRGKDILRALRNIPLCPKNIRENIFPFLVFIIFLLVSLFFLDASLITLSVIPLTLCAFNYSFTIMSLLCAITGVILNYLYINQVGILIDSNSEAYINSFLTTARLNIAMLIMAMLSVSHFVSMNRRLIKIIESNSLKDALTNTFNRRAFLSMLNGRQGVLMNKKKRQLTLLFLDIDYFKQVNDTYGHACGDELIASFARMLSATIRPSDILCRWGGEEFVIAAYDLTAEQSEAMAEALRRLTESTALTLSDGRKIHFTTSIGVAMFPQHEGGNIYDLIGLADEQLYKAKAQGRNRVCMRLVEEV
>NZ_QZDG01000008.1|WP_104212559.1|270870_271233_+|DUF305-domain-containing-protein
MKKIHLLLTAALLVPFLSFAADSAHSGHGAASDASSSQQAYMKGMDAMHTEMMEGMQSSDPDIAFAKGMIAHHRGAIDMAKTELQYGKDPELRKLAEEIIKAQQPEIDQMEAWLKKQNKP
>NZ_QZDG01000008.1|WP_014914090.1|271549_273466_+|PTS-transporter-subunit-EIIC
MNSKVLAENILRLVGGETNVSTLVHCATRLRFKIVDHGKVDVAALEALEGVITVINASGQLQVVIGNRVPEVYRAFGAISKLLEDGDGKRQTAESEASTSAMGRLIDLVAGIFTPLLGAMAAAGVLKGALAIVIALGWLNTKESTYVILHAASDSLFYFLPMLLAITSARKFETNIFVAVSIAGALVYPTIQGLFDAGQPVTFFGLPVVMMKYTSSVIPIIFSVWLMSYIERFLNRHIHESVRNILTPFFLLVLMVPLTLMTIGPIGISASKLIASVFVSIYSFNPIIAGALIAAAWQILVIFGVHWGFVTVFINDLSVMGHSYLKAASSPSVFAQSGALLGVMVRTKDKKLKALAGSTFIASLFGITEPGVYGVTLKLKKPFICAVIAAALGGAIVGYAKSSAISMGMPGLLTLPIFYGEGFIGFLIGCAIAFVASFVLTVIVGFDEPTQPAESTPAPTHSPTTTPAAPVSRQQANAVPLPLKDAPETAEQLGSPAKGELILLEEVNDKVFSSGVVGLGVAILPQEGRIYSPVDGMIASTFASGHAVGILSQKGAEILIHVGINTVQLEGQHYQMHVAEGDKVTKGQLLLEFDLDAIQKAGYDTVTPMVITNAEEYRVFSLGAARQQQAGETVIALA
>NZ_QZDG01000008.1|WP_104212558.1|273535_274924_-|6-phospho-beta-glucosidase
MKAFPDGFLWGGSVAANQVEGAWNEDGKGVSTSDLQLKGVHGPVTERDESISCIKDRAIDFYHQYPQDIQLFAEMGFKVLRTSIAWTRIYPEGDEAEPCEAGLAFYDRLFDEMAKHQIQPLITLSHYEMPYGLVKKLGGWGNHAVIDHFEKYARTVFSRYKDKVKYWLTFNEINMALHSPFTGIGLGGEPSKQEIYQAIHHQLVASARAVKACHDIIPDAKIGNMLLGAVRYPMTCHPKDVLEAQSKNREWLFFGDVQVRGTYPAWIQRYFRENGIELTITAQDKDDLSHTVDFVSFSYYMSGCATFEPEKYQSSRGNIIRLIPNPHLEASEWGWQIDPEGLRFLLNELYDRYQKPLFIVENGLGARDVVEEDGSIHDSYRIDYLRRHLIQVREAIDDGVELLGYTSWGPIDLVSAGTAQMSKRYGFIHVDRDDDGKGTLERRRKDSFYWYQDVINSNGKSL

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

285378 : 312376

Cronobacter_phage(70.37%)

capsid,tail,integrase,portal,holin,head,terminase

attL 285211:285259|attR 314684:314732

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
285211:285259	attL	NA	NA	NA	NA
WP_119871165.1\|285378_286395_-\|integrase	tyrosine-type recombinase/integrase	A0A218M4I3	Erwinia_phage	1.4e-124	64.1
WP_119871166.1\|286394_286859_-	hypothetical protein	NA	NA	NA	NA
WP_119871167.1\|286860_287175_-	STAS-like domain-containing protein	A0A2H4J4X6	uncultured_Caudovirales_phage	5.2e-14	47.4
WP_119871168.1\|287179_288280_-	hypothetical protein	NA	NA	NA	NA
WP_119871169.1\|288297_288885_-	phage repressor protein CI	F1BUS8	Erwinia_phage	7.7e-35	41.9
WP_119871170.1\|289020_289251_+	regulator	NA	NA	NA	NA
WP_119871171.1\|289271_289775_+	hypothetical protein	F1BUN6	Cronobacter_phage	8.1e-41	53.7
WP_119871172.1\|289786_289990_+	DUF2724 domain-containing protein	NA	NA	NA	NA
WP_119871173.1\|289992_290337_+	hypothetical protein	NA	NA	NA	NA
WP_119871174.1\|290411_290648_+	DUF2732 domain-containing protein	A0A0M3UL87	Salmonella_phage	6.5e-09	46.1
WP_119871175.1\|290644_291562_+	Dam family site-specific DNA-(adenine-N6)-methyltransferase	A0A0M4QWR0	Salmonella_phage	2.5e-88	60.6
WP_119871176.1\|291627_291924_-	hypothetical protein	NA	NA	NA	NA
WP_119871177.1\|292012_293998_+	replication endonuclease	F1BUS0	Erwinia_phage	2.6e-223	62.0
WP_119871178.1\|294296_294617_-	ogr/Delta-like zinc finger family protein	F1BUM8	Cronobacter_phage	1.5e-37	72.1
WP_119871179.1\|294625_295666_-\|portal	phage portal protein	F1BUM7	Cronobacter_phage	4.5e-155	77.8
WP_119871180.1\|295641_297417_-\|terminase	terminase	F1BUM5	Cronobacter_phage	3.0e-271	79.4
WP_119871181.1\|297580_298402_+\|capsid	phage capsid protein	F1BUM4	Cronobacter_phage	2.5e-71	55.0
WP_119871182.1\|298478_299519_+\|capsid	phage major capsid protein, P2 family	F1BUM2	Cronobacter_phage	2.1e-144	77.5
WP_119871183.1\|299520_300222_+\|terminase	terminase	F1BUM0	Cronobacter_phage	2.2e-68	56.0
WP_127110940.1\|300281_300770_+\|head	head completion/stabilization protein	F1BUL8	Cronobacter_phage	6.2e-54	70.0
WP_119871185.1\|300766_301267_+\|tail	phage tail protein	NA	NA	NA	NA
WP_119871186.1\|301263_301968_+	hypothetical protein	F1BUL6	Cronobacter_phage	2.2e-84	67.1
WP_119871187.1\|301970_303113_+	DUF2586 domain-containing protein	F1BUL5	Cronobacter_phage	4.2e-138	68.0
WP_119871188.1\|303109_303565_+	DUF2597 family protein	F1BUL4	Cronobacter_phage	7.5e-54	68.9
WP_109463617.1\|303574_303868_+\|holin	holin	Q6K1I2	Salmonella_virus	2.1e-17	56.2
WP_119871189.1\|303864_304206_+	M15 family metallopeptidase	F1BUL3	Cronobacter_phage	4.0e-44	81.2
WP_119871190.1\|304205_304562_+	hypothetical protein	F1BUL2	Cronobacter_phage	2.4e-23	58.5
WP_119871192.1\|304694_304952_+	hypothetical protein	A5X9I7	Aeromonas_virus	1.8e-20	59.3
WP_119871194.1\|305139_307107_+\|tail	phage tail tape measure protein	F1BUK9	Cronobacter_phage	2.7e-188	51.5
WP_119871195.1\|307106_307442_+	DUF2590 family protein	F1BUK8	Cronobacter_phage	1.3e-34	69.9
WP_119871196.1\|307431_308616_+	hypothetical protein	F1BUK6	Cronobacter_phage	9.4e-157	70.1
WP_119871197.1\|308608_309241_+	hypothetical protein	F1BUK5	Cronobacter_phage	2.1e-54	57.7
WP_119871198.1\|311136_311859_+	hypothetical protein	F1BUK1	Cronobacter_phage	3.2e-46	45.0
WP_119871199.1\|311830_312376_+	hypothetical protein	F1BUJ9	Cronobacter_phage	8.7e-49	58.2
314684:314732	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

5. NZ_QZDG01000017

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_QZDG01000017_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_QZDG01000017_1

63851-64359

TypeI-F

I-F

Consensus_repeat	Method
GTTCACTGCCGTATAGGCAGCTTAGAAA	PILER-CR
GTTCACTGCCGTATAGGCAGCTTAGAAA	CRISPRCasFinder
GTTCACTGCCGTATAGGCAGCTTAGAAA	CRT

8 spacers

cas1,cas3f

The CRISPR arrays of NZ_QZDG01000017_1

>merge|NZ_QZDG01000017|1|63851-64359|PILER-CR,CRISPRCasFinder,CRT
GTTCACTGCCGTATAGGCAGCTTAGAAATGGTGCCGCCATGTTTTGAGCGGACCATACCGGTTCACTGCCGTATAGGCAGCTTAGAAACGACACATCCGCCACACGCCCGTCGGCGCTGCGTTCACTGCCGTATAGGCAGCTTAGAAAACACGCTGTGCGCGTTGATTGCGCAGCACTGGGTTCACTGCCGTATAGGCAGCTTAGAAAGTAATACTGGGATCGGATTTCGTAAACAAAATGTTCACTGCCGTATAGGCAGCTTAGAAACTACCGCGCCCTTGAAACGCTGCGTCGTATTCGTTCACTGCCGTATAGGCAGCTTAGAAAGTTCACCATATTTCCCTGCTAATGAAATCCGTGTTCACTGCCGTATAGACAGCTTAGAAATGAACTAGTAATGGCGACAAAACAGATAGTCTGTTCACTGCCGCATAGGCAGCTTAGAAAATCGATATTAATGTCTACATATTCGCGGAATGAGTTCACTGCCGTACAGGCAGTTAAGAAA

>NZ_QZDG01000017|1|1|63851-64298|PILER-CR
GTTCACTGCCGTATAGGCAGCTTAGAAA	TGGTGCCGCCATGTTTTGAGCGGACCATACCG
GTTCACTGCCGTATAGGCAGCTTAGAAA	CGACACATCCGCCACACGCCCGTCGGCGCTGC
GTTCACTGCCGTATAGGCAGCTTAGAAA	ACACGCTGTGCGCGTTGATTGCGCAGCACTGG
GTTCACTGCCGTATAGGCAGCTTAGAAA	GTAATACTGGGATCGGATTTCGTAAACAAAAT
GTTCACTGCCGTATAGGCAGCTTAGAAA	CTACCGCGCCCTTGAAACGCTGCGTCGTATTC
GTTCACTGCCGTATAGGCAGCTTAGAAA	GTTCACCATATTTCCCTGCTAATGAAATCCGT
GTTCACTGCCGTATAGACAGCTTAGAAA	TGAACTAGTAATGGCGACAAAACAGATAGTCT
GTTCACTGCCGCATAGGCAGCTTAGAAA

>NZ_QZDG01000017|1|1|63851-64359|CRISPRCasFinder
GTTCACTGCCGTATAGGCAGCTTAGAAA	TGGTGCCGCCATGTTTTGAGCGGACCATACCG
GTTCACTGCCGTATAGGCAGCTTAGAAA	CGACACATCCGCCACACGCCCGTCGGCGCTGC
GTTCACTGCCGTATAGGCAGCTTAGAAA	ACACGCTGTGCGCGTTGATTGCGCAGCACTGG
GTTCACTGCCGTATAGGCAGCTTAGAAA	GTAATACTGGGATCGGATTTCGTAAACAAAAT
GTTCACTGCCGTATAGGCAGCTTAGAAA	CTACCGCGCCCTTGAAACGCTGCGTCGTATTC
GTTCACTGCCGTATAGGCAGCTTAGAAA	GTTCACCATATTTCCCTGCTAATGAAATCCGT
GTTCACTGCCGTATAGACAGCTTAGAAA	TGAACTAGTAATGGCGACAAAACAGATAGTCT
GTTCACTGCCGCATAGGCAGCTTAGAAA	ATCGATATTAATGTCTACATATTCGCGGAATGA
GTTCACTGCCGTACAGGCAGTTAAGAAA

>NZ_QZDG01000017|1|1|63851-64359|CRT
GTTCACTGCCGTATAGGCAGCTTAGAAA	TGGTGCCGCCATGTTTTGAGCGGACCATACCG
GTTCACTGCCGTATAGGCAGCTTAGAAA	CGACACATCCGCCACACGCCCGTCGGCGCTGC
GTTCACTGCCGTATAGGCAGCTTAGAAA	ACACGCTGTGCGCGTTGATTGCGCAGCACTGG
GTTCACTGCCGTATAGGCAGCTTAGAAA	GTAATACTGGGATCGGATTTCGTAAACAAAAT
GTTCACTGCCGTATAGGCAGCTTAGAAA	CTACCGCGCCCTTGAAACGCTGCGTCGTATTC
GTTCACTGCCGTATAGGCAGCTTAGAAA	GTTCACCATATTTCCCTGCTAATGAAATCCGT
GTTCACTGCCGTATAGACAGCTTAGAAA	TGAACTAGTAATGGCGACAAAACAGATAGTCT
GTTCACTGCCGCATAGGCAGCTTAGAAA	ATCGATATTAATGTCTACATATTCGCGGAATGA
GTTCACTGCCGTACAGGCAGTTAAGAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_QZDG01000017.1\|WP_039517591.1\|62127_62766_+\|hypothetical-protein	unknown	unknown	unknown
NZ_QZDG01000017.1\|WP_119872013.1\|65191_65806_+\|YitT-family-protein	unknown	unknown	gnl\|CDD\|224203
NZ_QZDG01000017.1\|WP_119872009.1\|72046_73027_+\|type-I-F-CRISPR-associated-endonuclease-Cas1	cas1	cd09718_cas1_CAS-I-F	gnl\|CDD\|132676
NZ_QZDG01000017.1\|WP_014916572.1\|67768_68248_+\|Hcp-family-type-VI-secretion-system-effector	unknown	unknown	gnl\|CDD\|213799
NZ_QZDG01000017.1\|WP_119872012.1\|65869_67063_+\|aspartate/tyrosine/aromatic-aminotransferase	unknown	unknown	gnl\|CDD\|181731
NZ_QZDG01000017.1\|WP_119872015.1\|55961_56234_+\|envelope-stress-response-protein-PspG	unknown	unknown	gnl\|CDD\|181875
NZ_QZDG01000017.1\|WP_119872011.1\|68750_69158_-\|DUF1240-domain-containing-protein	unknown	unknown	gnl\|CDD\|336520
NZ_QZDG01000017.1\|WP_119872010.1\|69189_69600_-\|DUF1240-domain-containing-protein	unknown	unknown	gnl\|CDD\|336520
NZ_QZDG01000017.1\|WP_010295086.1\|64461_64941_+\|Lrp/AsnC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224439
NZ_QZDG01000017.1\|WP_014916565.1\|56719_58108_-\|cytochrome-P450	unknown	unknown	gnl\|CDD\|365848
NZ_QZDG01000017.1\|WP_119872008.1\|73023_76326_+\|type-I-F-CRISPR-associated-helicase-Cas3	cas3f	cd09673_cas3f_CAS-I-F	gnl\|CDD\|274201
NZ_QZDG01000017.1\|WP_039278477.1\|62904_63321_-\|type-II-toxin-antitoxin-system-VapC-family-toxin	unknown	unknown	gnl\|CDD\|350229
NZ_QZDG01000017.1\|WP_039278475.1\|63317_63545_-\|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|226863
NZ_QZDG01000017.1\|WP_010279223.1\|59604_61011_+\|replicative-DNA-helicase	unknown	unknown	gnl\|CDD\|181193
NZ_QZDG01000017.1\|WP_119872016.1\|54773_55796_+\|tRNA-dihydrouridine(20/20a)-synthase-DusA	unknown	unknown	gnl\|CDD\|236991
NZ_QZDG01000017.1\|WP_039278467.1\|68297_68705_-\|DUF1240-domain-containing-protein	unknown	unknown	gnl\|CDD\|336520
NZ_QZDG01000017.1\|WP_147386733.1\|56282_56555_-\|hypothetical-protein	unknown	unknown	unknown
NZ_QZDG01000017.1\|WP_040033638.1\|58489_59476_-\|quinone-oxidoreductase	unknown	unknown	gnl\|CDD\|182701
NZ_QZDG01000017.1\|WP_119872014.1\|61052_62135_+\|alanine-racemase	unknown	unknown	gnl\|CDD\|143500
NZ_QZDG01000017.1\|WP_039278469.1\|67146_67644_+\|M48-family-metallopeptidase	unknown	unknown	gnl\|CDD\|224368

Protein	Function_ID	Function_description	E-value
NZ_QZDG01000017.1\|WP_119872013.1\|65191_65806_+\|YitT-family-protein	gnl\|CDD\|224203	COG1284, COG1284, Uncharacterized conserved protein [Function unknown].	3.04058e-40
NZ_QZDG01000017.1\|WP_119872008.1\|73023_76326_+\|type-I-F-CRISPR-associated-helicase-Cas3	gnl\|CDD\|274201	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST. The helicase in many CRISPR-associated (cas) gene clusters is designated Cas3, and most Cas3 proteins are described by model TIGR01587. Members of this family are considerably larger, show a number of motifs in common with TIGR01587 sequences, and replace Cas3 in some CRISPR/cas loci in a number of Proteobacteria, including Yersinia pestis, Chromobacterium violaceum, Erwinia carotovora subsp. atroseptica SCRI1043, Photorhabdus luminescens subsp. laumondii TTO1, Legionella pneumophila, etc.	0
NZ_QZDG01000017.1\|WP_119872009.1\|72046_73027_+\|type-I-F-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|132676	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the YPEST subtype of CRISPR/Cas system.	0
NZ_QZDG01000017.1\|WP_119872012.1\|65869_67063_+\|aspartate/tyrosine/aromatic-aminotransferase	gnl\|CDD\|181731	PRK09257, PRK09257, aromatic amino acid transaminase.	0
NZ_QZDG01000017.1\|WP_119872015.1\|55961_56234_+\|envelope-stress-response-protein-PspG	gnl\|CDD\|181875	PRK09459, pspG, envelope stress response protein PspG.	1.53661e-25
NZ_QZDG01000017.1\|WP_119872011.1\|68750_69158_-\|DUF1240-domain-containing-protein	gnl\|CDD\|336520	pfam06836, DUF1240, Protein of unknown function (DUF1240). This family consists of a number of hypothetical putative membrane proteins which seem to be specific to Yersinia pestis. The function of this family is unknown.	1.46761e-39
NZ_QZDG01000017.1\|WP_119872010.1\|69189_69600_-\|DUF1240-domain-containing-protein	gnl\|CDD\|336520	pfam06836, DUF1240, Protein of unknown function (DUF1240). This family consists of a number of hypothetical putative membrane proteins which seem to be specific to Yersinia pestis. The function of this family is unknown.	6.91772e-31
NZ_QZDG01000017.1\|WP_010295086.1\|64461_64941_+\|Lrp/AsnC-family-transcriptional-regulator	gnl\|CDD\|224439	COG1522, Lrp, Transcriptional regulators [Transcription].	3.9428e-34
NZ_QZDG01000017.1\|WP_014916565.1\|56719_58108_-\|cytochrome-P450	gnl\|CDD\|365848	pfam00067, p450, Cytochrome P450. Cytochrome P450s are haem-thiolate proteins involved in the oxidative degradation of various compounds. They are particularly well known for their role in the degradation of environmental toxins and mutagens. They can be divided into 4 classes, according to the method by which electrons from NAD(P)H are delivered to the catalytic site. Sequence conservation is relatively low within the family - there are only 3 absolutely conserved residues - but their general topography and structural fold are highly conserved. The conserved core is composed of a coil termed the 'meander', a four-helix bundle, helices J and K, and two sets of beta-sheets. These constitute the haem-binding loop (with an absolutely conserved cysteine that serves as the 5th ligand for the haem iron), the proton-transfer groove and the absolutely conserved EXXR motif in helix K. While prokaryotic P450s are soluble proteins, most eukaryotic P450s are associated with microsomal membranes. their general enzymatic function is to catalyze regiospecific and stereospecific oxidation of non-activated hydrocarbons at physiological temperatures.	6.68359e-63
NZ_QZDG01000017.1\|WP_039278477.1\|62904_63321_-\|type-II-toxin-antitoxin-system-VapC-family-toxin	gnl\|CDD\|350229	cd09881, PIN_VapC4-5_FitB-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC4 and VapC5, and Neisseria gonorrhoeae FitB and related proteins. This family includes the Virulence associated protein C (VapC)-like PIN (PilT N terminus) domain of Mycobacterium tuberculosis VapC4 and VapC5 ribonuclease toxins of the VapBC toxin/antitoxin (TA) system, and Neisseria gonorrhoeae FitB toxin of the FitAB TA system. This family belongs to the VapC-like family of the PIN domain nuclease superfamily. VapC is the PIN-domain ribonuclease toxin from prokaryotic VapBC toxin-antitoxin (TA) systems. VapB is a transcription factor-like protein antitoxin acting as an inhibitor. Other members of the VapC-like nuclease family include eukaryotic ribonucleases such as Smg6, ribosome assembly factor NOB1, exosome subunit Rrp44 endoribonuclease and rRNA-processing protein Fcf1. The structural properties of the PIN (PilT N terminus) domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions, in some members, additional metal coordinating residues can be found. Some members of the superfamily lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	1.28697e-47
NZ_QZDG01000017.1\|WP_039278475.1\|63317_63545_-\|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein	gnl\|CDD\|226863	COG4456, VagC, Virulence-associated protein and related proteins [Function unknown].	6.04187e-10
NZ_QZDG01000017.1\|WP_010279223.1\|59604_61011_+\|replicative-DNA-helicase	gnl\|CDD\|181193	PRK08006, PRK08006, replicative DNA helicase DnaB.	0
NZ_QZDG01000017.1\|WP_119872016.1\|54773_55796_+\|tRNA-dihydrouridine(20/20a)-synthase-DusA	gnl\|CDD\|236991	PRK11815, PRK11815, tRNA dihydrouridine(20/20a) synthase DusA.	0
NZ_QZDG01000017.1\|WP_039278467.1\|68297_68705_-\|DUF1240-domain-containing-protein	gnl\|CDD\|336520	pfam06836, DUF1240, Protein of unknown function (DUF1240). This family consists of a number of hypothetical putative membrane proteins which seem to be specific to Yersinia pestis. The function of this family is unknown.	1.46931e-32
NZ_QZDG01000017.1\|WP_014916572.1\|67768_68248_+\|Hcp-family-type-VI-secretion-system-effector	gnl\|CDD\|213799	TIGR03344, VI_effect_Hcp1, type VI secretion system effector, Hcp1 family. This family includes Hcp1 (hemolysin coregulated protein 1), an exported, homohexameric ring-forming virulence protein from Pseudomonas aeruginosa. Hcp1 lacks a conventional signal sequence and is instead exported by means of the type VI secretion system, encoded by a pathogenicity cluster of a class previously designated IAHP (IcmF-associated homologous protein). Homologs of Hcp1, in this protein family, are found in various bacteria of which most but not all are known pathogens. Pathogens may have many multiple members of this family, with three to ten in Erwinia carotovora, Yersinia pestis, uropathogenic Escherichia coli, and the insect pathogen Photorhabdus luminescens. [Cellular processes, Pathogenesis].	7.94409e-79
NZ_QZDG01000017.1\|WP_040033638.1\|58489_59476_-\|quinone-oxidoreductase	gnl\|CDD\|182701	PRK10754, PRK10754, NADPH:quinone reductase.	0
NZ_QZDG01000017.1\|WP_119872014.1\|61052_62135_+\|alanine-racemase	gnl\|CDD\|143500	cd06827, PLPDE_III_AR_proteobact, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzymes, Proteobacterial Alanine Racemases. This subfamily is composed mainly of proteobacterial alanine racemases (EC 5.1.1.1), fold type III PLP-dependent enzymes that catalyze the interconversion between L- and D-alanine, which is an essential component of the peptidoglycan layer of bacterial cell walls. hese proteins are similar to other bacterial ARs and are fold type III PLP-dependent enzymes containing contains an N-terminal PLP-binding TIM-barrel domain and a C-terminal beta-sandwich domain. They exist as homodimers with active sites that lie at the interface between the TIM barrel domain of one subunit and the beta-sandwich domain of the other subunit. Homodimer formation and the presence of the PLP cofactor are required for catalytic activity.	0
NZ_QZDG01000017.1\|WP_039278469.1\|67146_67644_+\|M48-family-metallopeptidase	gnl\|CDD\|224368	COG1451, COG1451, Predicted metal-dependent hydrolase [General function prediction only].	1.93989e-29

>NZ_QZDG01000017.1|WP_039278475.1|63317_63545_-|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein
MRIVSVFKNGNNRAIRLPRDMDFEGVNELEIVREGDTIMLRPVKPNWHSFLQEDRADADFMTERQDVVEEGRFKL
>NZ_QZDG01000017.1|WP_039278477.1|62904_63321_-|type-II-toxin-antitoxin-system-VapC-family-toxin
MSRLFMLDTNICSFIMREHPAEVIEKLQQCTLRRDRIVVSAITYAEMRFGAVGKKASPRHMQLVDAFCRRLDAVLPWDSAAVDATTKIKIELAAAGTPIGPNDTAIAGHAISAKAILVTNNLREFERVPGLTLEDWVK
>NZ_QZDG01000017.1|WP_039517591.1|62127_62766_+|hypothetical-protein
MSKNGPAGFYRQAHGLPTLKRVIYYAASWLAVSAILTLFALVNFYTLKPTDVGGTLFGGMFSAMFDLIYWSCAASGFCFLALFRLSGWRVAWILAGLVQIGISALWRIQYWQEYENDNLILSPMPGELYVSMLVGAGMAAIGIVKYRHARRSPVAQRPTYAKAVAALLLVALYLALPLHLYLREPLPYCAFSPDGQQLSICLGDNDERIIVE
>NZ_QZDG01000017.1|WP_119872014.1|61052_62135_+|alanine-racemase
MKTATAVINRRALRHNLQRIRQLAPDSQVVAIVKANAYGHGMIDAAHTFSDADCYGVARLSEALALRAAGITKPIVLLEGFFSADELPLLVEHQLETAVHSPEQLAALEQATLPQPIPVWMKLDSGMHRLGVLPEHADAFWQRLTECRNVVQPVNIMSHFCRADEPEAGTTERQLTCFDAFTQGKPGAQSIAASGGILLWPQSHRDRVRPGIILYGVSPLDNEDAAHFGFQPAMTFTSHLIAVREHHAGEAVGYGGTWTSPRNTRLGVVAVGYGDGYPRCAPAGTPVLINGREVPLSGRVSMDMITVDLGPDAQDKVGDEVILWGPTLPVERIAAHTGASAYELITRLTQRTALEYVDGE
>NZ_QZDG01000017.1|WP_010279223.1|59604_61011_+|replicative-DNA-helicase
MAEKRPTNKSNEPRDRQMEGLKLPPHSLEAEQSVLGGLMLDNERWDNVAERVVANDFYNRAHRLIFTEMQRLLEMSKPIDLITLSESLELQGSLESAGGFAYLAELAKNTPSAANIGAYADIVRERAVVREMISVANEIADAGYDPQGRSSEDLLDLAESRVFQIAENRASKDEGPKSIDRILEDTVSRIEQLYQRPHDGVTGVSTGYQDLDKKTAGLQKSDLIIVAARPSMGKTTFAMNLCENAAMMQDKPVLIFSLEMPGEQIMMRMLASLSRVDQTRIRTGQLDDEDWARISSTMGILLEKRNMYIDDSSGLTPTEVRSRARRVFREHDGLSLIMIDYLQLMRVPSLSDNRTLEIAEISRSLKALAKELQVPVVALSQLNRSLEQRADKRPVNSDLRESGSIEQDADLIMFIYRDEVYHENSDLKGIAEIILGKQRNGPIGSVRLTFNGQWSRFDNYAGPQYDDE
>NZ_QZDG01000017.1|WP_040033638.1|58489_59476_-|quinone-oxidoreductase
MAKRVQFRAYGGPEVLQYVDFTPADPAAGEVQVENRAIGINFIDTYIRSGLYPVPDLPSGLGTEAAGVVTKVGAGVSELKVGDRVVYAQSGLGGYSDVHNVVAEKVALLPDAISFEQAAASFLKGLTVYYLLRQTYEIKPNEVFLFHAAAGGVGLIACQWAKALGAKLIGTVGSDEKAERAKQAGAWATINYRTENIAQRVAELTDGQKVNVVYDSVGKDTWEASLDSLRRRGLMVSFGNASGPVTGVNLGILNQKGSLYVTRPSLFGYVTNRAELEQASNELFSLIASGAITVDVPQNQKFALSDAQAAHRALESRSTQGSCLLIPG
>NZ_QZDG01000017.1|WP_014916565.1|56719_58108_-|cytochrome-P450
MRSIKRLPMPPTRSILGHVDYLKRSDVHLQMLRWKAQYGRFYRLRLGLTSAIVIADAECIRTIMKSRPDEFRRISSIESVFQEAGLNGVFSSEGKRWEHQRRLTEPMFQPAHLKYFYPSLRKVTSRLSDRFAMLAETGETVVLVEEFKRYTVDITSLLAFGEDVNTLEQGENPLSQSLRRLFPMINARSGSLFPVWRYIRRERDKQFDASLSLIREYVDGFIYRQRKRLRLNPQLMEAPENMLQVMLAEQKKDGTLKDDDIVANAITLLLAGEDTTANTLAWMSFQLCSAPSVEECVFQECKEAADGAGALLPWPLPRLPWLTAVMYESMRLKPVAPLLYLEPTKNTVIDDFLIKKGTPLLLMLNASGFDDALFQQPDDFVPERWLERGKASFSDLQPFGGGPRMCPGRSLALMEIKLGFHALCSGFRVEAQQPASDVTESFAFTMSPSGFRVKLHKREPLQ
>NZ_QZDG01000017.1|WP_147386733.1|56282_56555_-|hypothetical-protein
MIVTKVPLCGYYFPDDDEIVWLFATVFYLPNLVCSPSKRQSGVKLWRHPSSHIREKISAGAHFCTKTGHIKTRRIKTSRIKTSRSKTSWC
>NZ_QZDG01000017.1|WP_119872015.1|55961_56234_+|envelope-stress-response-protein-PspG
MLEIFFVIGFFIMLMLTGVSLLGVIAALFVASLFMLIGGLFSIAIKVLPWLILAVAAVWLWRKFSGRPVYNSHSYTYRKYTYRQRNGNEW
>NZ_QZDG01000017.1|WP_119872016.1|54773_55796_+|tRNA-dihydrouridine(20/20a)-synthase-DusA
MTDVKSGTHHTVSTDSRASRLNRFSIAPMLDWTDRHCRYFLRQLTSQTLLYTEMVTTGAILHGKGDYLAYSEEEHPLALQLGGSDPQALAQCAKLAEQRGYDEVNLNVGCPSDRVQNGRFGACLMGEAALVADCIKAMKDSTSIPITVKTRIGIDDQDSYEFLCDFIQTVAERGECETFIVHARKAWLSGLSPKENREIPPLDYPRVYQLKRDFPALTIAINGGVKTLEEAKTHLQHLDGVMMGREAYQNPGILAQVDRELFGIDTATPDLAGVVRAMYPYIERELSGGASLGHITRHMLGMFQGIPGARQWRRYLSENAHKPGADAAVVERALALINLV
>NZ_QZDG01000017.1|WP_010295086.1|64461_64941_+|Lrp/AsnC-family-transcriptional-regulator
MYHIDDFDLKILTLLQTNGRLTNQELSDLVGLSASQCSRRRIALEQAQLILGYHARLSPNAVGLECLGLIEVRLINHTSEYVERFHQMLGEVDAIIDAYKTTGDADYLLKVAVADLPGLSTLISQILSQNKSVAHLKTSVVLNRLKENGLMMPELPALP
>NZ_QZDG01000017.1|WP_119872013.1|65191_65806_+|YitT-family-protein
MDNVIPTQKLSHTLLEDILAILIGTLMVSFGVILLRQAGALTGGTAGIAFLIHYLTNVSFGVAFFLLNLPFYYLALRRMGWEFTVKTFCAVGLVSLFSDLHPMFVHFDQLNPFYATLFGNIITGIGFVVLFRHKASLGGMNILALYLQDKYGLRAGKLQMGVDVVIVLTSLFVVSIPMLVASILGATILNLIIAMNHRPGRYAA
>NZ_QZDG01000017.1|WP_119872012.1|65869_67063_+|aspartate/tyrosine/aromatic-aminotransferase
MFQNVDTYAGDPILSLMEKFKQDPRADKINLSIGLYYNEQNIIPQLRSVSAAESSLKQPAQSASSYLPMEGLQPYRTAIQQLLFGENHAALEAGRIATIQTLGGSGALKVGADFLKRYFPNSEVWVSDPTWENHIAIFEGAGFNVHTYPYFDGENLGVKFDAMLATLQALPARSIVLLHPCCHNPTGSDLTTEQWDRVIEVIIQRELIPFMDIAYQGFGLGIEQDAYAIRAVARAGVPALIANSFSKIFSLYSERVGGLSVVCDDADSAQRVLGQLKATVRRNYSSPPNFGAQVVSKVLNDAQLNADWKAEVEEMRTRILSMRQELVSALKNALPNRNFDYLLTQRGMFSYTGFSPEQVDRLREEFGVYLIASGRMCMAGLNHSNVQRVAAAFAAIQ
>NZ_QZDG01000017.1|WP_039278469.1|67146_67644_+|M48-family-metallopeptidase
MTQLRYLNGYPPAIVAQVQTLLDQGKLGLWLEKRYPDRHPIQSDKSLYQFVAELKQRYLKNAPAISKVLYDNKQNPIKGTLGTNTFVARVQGGKLKSNNEIRIATLFRDGPEDFLRMIVVHELAHLKEKDHNKAFYQLCCHMDPDYHQLEFDMRIWLNWREINAG
>NZ_QZDG01000017.1|WP_014916572.1|67768_68248_+|Hcp-family-type-VI-secretion-system-effector
MANLIYASINGQKQGLISSGCSTLDSIGNRYQTGHEDQIQVLGLNHSISREQNVAHHPIHFIKPIDKSSPLLGMAISYNEKVDVTFYFYRVNSAGQLELYYEVTLTDASIVDVTCVYPHVIDNNDIMPYEKVQLKYKTIAWNHKIAGTSGYSIWEEMSL
>NZ_QZDG01000017.1|WP_039278467.1|68297_68705_-|DUF1240-domain-containing-protein
MFKINRPLSFAFSVLTFILTCWGIWFSFNGYWNLFRLNDVIIFSWKVGILIFGAPILFYFSYLGFYMAVKNKPIGMHGILASVCGYLFFIGVVVSFVASMYISFNFREQGYEICPKNSWMDPNKYVKNIALCDEW
>NZ_QZDG01000017.1|WP_119872011.1|68750_69158_-|DUF1240-domain-containing-protein
MVKVNRPLVGAFAVFLFFISCFISWISFNGYLSFLQKSDVIIFSWKLGLMVFGSPLLFYFSYLAFYSAIKNEVPKMNNKLANSLAVVAIFGAVVSFFSSTYISYDLNDQDYKTCPKNSWIAPNKYVKDISLCDEW
>NZ_QZDG01000017.1|WP_119872010.1|69189_69600_-|DUF1240-domain-containing-protein
MVKINRPFFFIYSVFIFLLSCWGGWFSLSGYIDFFNLNDVISFSWKLGVIIFLVPIVFQFSYFGFFSAVKNRPIKMNNKISNALVIFAIFGTVVSLFSSMYISYSLNEQGYKICPKNSWIAPNKYVRNIALCKEQM
>NZ_QZDG01000017.1|WP_119872009.1|72046_73027_+|type-I-F-CRISPR-associated-endonuclease-Cas1
MDNAFSPSDLKTILHSKRANVYYLQHCRILVNGGRVEYVTEEGNQSLYWNIPIANTSVVMLGTGTSVTQAAMREFARAGVMIGFCGGGGTPLFAANEAEVAVSWLSPQSEYRPTEYLQDWVSFWFDDEKRLAAAIAFQQVRIIQIRQHWLGSRLSRESRFTFKADHLQALLDRYEKGLTDCRTSNDVLVQEAMMTKALYKLAANAVSYGDFTRAKRGGGTDLANRFLDHGNYLAYGLAAVATWVLGLPHGLAVLHGKTRRGGLVFDVADLIKDALVLPQAFIAAMEGEDEQEFRQRCLTAFQQSEALDVMIGSLQDVASKLSQVGR
>NZ_QZDG01000017.1|WP_119872008.1|73023_76326_+|type-I-F-CRISPR-associated-helicase-Cas3
MNILLISECNKRALVETRRILDQFAERKGERTWQTAITQEGLNTLRKLLRKTARRNTAVACHWVRSANHTELLWIVGNLRRFNAQGSVPTNTTSRDILRSKDENPWHSAEVFSLLAAIAGLFHDVGKANALFQTGLSGTGPRSQPYRHEWVSLRLFQAFVGEQDDKGWLTALSTVTPEAEIPLLAALQRDKQTPSSSPFRTLPPLAQVIAWLIVSHHRLPVFNKSAELAPNSSEPQLDYAETWLTDHLSAQWNALNHCKLDVTPANLAQVWQFPHGTPLRSSVWREKARKFADRALKLPSFMHFAQLDQRLTVHLARLALMLADHHYSAGAATVGWQDMAYSVWANTDRKTGEYKQRLDEHCVGVGQNALLLGRSLPNLRDTLPAITRHKGFRQRSTHPRFRWQDRAFDLACSIRESSRQHGFFGVNMASTGRGKTFANARIMYGLSDETLGCRFSVALGLRTLTLQTGDALRQRLKLDEDDLAVLIGSQAVQDLHEMQLENETRQQNTAQTGSESADPLFSEHQYVRYDGSLDDGRLKTWLERSPTLHQLLSAPVLITTIDHLMPATESLRGGHQIAPMLRLLTSDLVLDEPDDFGLEDLPALCRLVNWAGMLGSRVLLSSATLPPALIRALFGAYLDGRAAWQQAYGTPNTPLNVCCGWFDEFDCQHEQYGDVKGFITRHDAFVQQRLKHLTKEELPLRLASIVPVSSPSKNKDDVHLAVAQAIHPLLRDLHSQHHQQHKSGKTASLGLVRMANINPLVAVARQLLAIPSPPDTCIHYCIYHSQHPLAMRSYIEQRLDAALMRNDADALWQVDEIRQAIENAPQQHHIFVVLATSVAEVGRDHDYDWAIVEPSSMRSFIQLAGRILRHRQDEQHVPKMPNICLLSHNIRALKDEDVAYCKPGFESDDEQLTTHDLRQLLQEEDYRHLNAAPRIVQPAPLTKPFSLVALEHAVLGKTLLGLTNQKLDDLKRPPAAFWWRAHPHWNGELQRRTPFRKSDRDEPYTLWIADDDEDAVFMIPDDGPSKWKQSDVIRPTSLHMAEGVCAWIDPDYHALYQRLADEKQWELKRVSARFGEIRLREKEEKDWLWHPLLGVFGALN

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_QZDG01000017_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_QZDG01000017_2

70703-71752

TypeI-F

I-F

Consensus_repeat	Method
TTTCTAAGCTGCCTATACGGCAGTGAAC	CRISPRCasFinder
TTTCTAAGCTGCCTATNCGGCAGTGAAC	CRT
GTTCACTGCCGCATAGGCAGCTTAGAAA	PILER-CR

17 spacers

cas1,cas3f,cas8f,cas5f,cas7f,cas6f

The CRISPR arrays of NZ_QZDG01000017_2

>merge|NZ_QZDG01000017|2|70703-71752|CRISPRCasFinder,CRT,PILER-CR
TGGATAAACTGCCTGTACGGCAGTGAACGCGGCTTATGACAGGGCGGCGAAAGAGCCTGTTTTCTAAGCTGCCTATGCGGCAGTGAACACTAATCGTTTTAAATCGGATCATCGGCATATCTTTCTAAGCTGCCTATGCGGCAGTGAACTCACGCGATGAACGAAAGGATCAGGAAAAGGATTTCTAAGCTGCCTATGCGGCAGTGAACTTCCAAATCAACGCGTTGCACGCCCTCAACATTTTCTAAGCTGCCTATGCGGCAGTGAACATCAGGTGGAAGTTGCGCTAGTTGCCTGGCGTTTTCTAAGCTGCCTATGCGGCAGTGAACGTAAAGTTGGCATCGGCGACGTATTTATTCCATTTCTAAGCTGCCTATGCGGCAGTGAACATCCGTTTTTTCAAGTTGAATGCTGGCCAGGCTTTTCTAAGCTGCCTATACGGCAGTGAACATCCTTCATTGATAACTGGTATCACTGCTCCTTTTCTAAGCTGCCTATACGGCAGTGAACATACCGGATTTCGGACTGACAATCCTCAGGTATTTCTAAGCTGCCTATACGGCAGTGAACAGTATCAGCCAGACGAAAACCGACTTTTTCACTTTCTAAGCTGCCTATACGGCAGTGAACTTTTCCCACTCACGCAGAAAGACTATATGCGTTTTCTAAGCTGCCTATACGGCAGTGAACCCATACCTTCAACCTCAGTGAAGTATTTCTCATTTCTAAGCTGCCTATACGGCAGTGAACTTCGCCGATTTGCGGGTGTATGTCATGCTCATTTTCTAAGCTGCCTATACGGCAGTGAACGACCCGGCGATTGATGAGATGGAACGAGCGCTTTTCTAAGCTGCCTATACGGCAGTGAACAAATTCCTCTGCTCCGCATGGGTATTATGACTTTTCTAAGCTGCCTATACGGCAGTGAACCGGGTATGTTTGCCAGTCTGTTTGCAGCAGACTTTCTAAGCTGCCTATACGGCAGTGAACTTTCGAGTGCGTGCCGCAACCCGTCAGGCAAGTTTCTAAGCTGCCTATACGGCAGTGAAC

>NZ_QZDG01000017|2|2|70703-71752|CRISPRCasFinder
TGGATAAACTGCCTGTACGGCAGTGAAC	GCGGCTTATGACAGGGCGGCGAAAGAGCCTGT
TTTCTAAGCTGCCTATGCGGCAGTGAAC	ACTAATCGTTTTAAATCGGATCATCGGCATATC
TTTCTAAGCTGCCTATGCGGCAGTGAAC	TCACGCGATGAACGAAAGGATCAGGAAAAGGA
TTTCTAAGCTGCCTATGCGGCAGTGAAC	TTCCAAATCAACGCGTTGCACGCCCTCAACAT
TTTCTAAGCTGCCTATGCGGCAGTGAAC	ATCAGGTGGAAGTTGCGCTAGTTGCCTGGCGT
TTTCTAAGCTGCCTATGCGGCAGTGAAC	GTAAAGTTGGCATCGGCGACGTATTTATTCCA
TTTCTAAGCTGCCTATGCGGCAGTGAAC	ATCCGTTTTTTCAAGTTGAATGCTGGCCAGGCT
TTTCTAAGCTGCCTATACGGCAGTGAAC	ATCCTTCATTGATAACTGGTATCACTGCTCCT
TTTCTAAGCTGCCTATACGGCAGTGAAC	ATACCGGATTTCGGACTGACAATCCTCAGGTA
TTTCTAAGCTGCCTATACGGCAGTGAAC	AGTATCAGCCAGACGAAAACCGACTTTTTCAC
TTTCTAAGCTGCCTATACGGCAGTGAAC	TTTTCCCACTCACGCAGAAAGACTATATGCGT
TTTCTAAGCTGCCTATACGGCAGTGAAC	CCATACCTTCAACCTCAGTGAAGTATTTCTCA
TTTCTAAGCTGCCTATACGGCAGTGAAC	TTCGCCGATTTGCGGGTGTATGTCATGCTCAT
TTTCTAAGCTGCCTATACGGCAGTGAAC	GACCCGGCGATTGATGAGATGGAACGAGCGCT
TTTCTAAGCTGCCTATACGGCAGTGAAC	AAATTCCTCTGCTCCGCATGGGTATTATGACT
TTTCTAAGCTGCCTATACGGCAGTGAAC	CGGGTATGTTTGCCAGTCTGTTTGCAGCAGAC
TTTCTAAGCTGCCTATACGGCAGTGAAC	TTTCGAGTGCGTGCCGCAACCCGTCAGGCAAG
TTTCTAAGCTGCCTATACGGCAGTGAAC

>NZ_QZDG01000017|2|2|70703-71752|CRT
TGGATAAACTGCCTGTACGGCAGTGAAC	GCGGCTTATGACAGGGCGGCGAAAGAGCCTGT
TTTCTAAGCTGCCTATGCGGCAGTGAAC	ACTAATCGTTTTAAATCGGATCATCGGCATATC
TTTCTAAGCTGCCTATGCGGCAGTGAAC	TCACGCGATGAACGAAAGGATCAGGAAAAGGA
TTTCTAAGCTGCCTATGCGGCAGTGAAC	TTCCAAATCAACGCGTTGCACGCCCTCAACAT
TTTCTAAGCTGCCTATGCGGCAGTGAAC	ATCAGGTGGAAGTTGCGCTAGTTGCCTGGCGT
TTTCTAAGCTGCCTATGCGGCAGTGAAC	GTAAAGTTGGCATCGGCGACGTATTTATTCCA
TTTCTAAGCTGCCTATGCGGCAGTGAAC	ATCCGTTTTTTCAAGTTGAATGCTGGCCAGGCT
TTTCTAAGCTGCCTATACGGCAGTGAAC	ATCCTTCATTGATAACTGGTATCACTGCTCCT
TTTCTAAGCTGCCTATACGGCAGTGAAC	ATACCGGATTTCGGACTGACAATCCTCAGGTA
TTTCTAAGCTGCCTATACGGCAGTGAAC	AGTATCAGCCAGACGAAAACCGACTTTTTCAC
TTTCTAAGCTGCCTATACGGCAGTGAAC	TTTTCCCACTCACGCAGAAAGACTATATGCGT
TTTCTAAGCTGCCTATACGGCAGTGAAC	CCATACCTTCAACCTCAGTGAAGTATTTCTCA
TTTCTAAGCTGCCTATACGGCAGTGAAC	TTCGCCGATTTGCGGGTGTATGTCATGCTCAT
TTTCTAAGCTGCCTATACGGCAGTGAAC	GACCCGGCGATTGATGAGATGGAACGAGCGCT
TTTCTAAGCTGCCTATACGGCAGTGAAC	AAATTCCTCTGCTCCGCATGGGTATTATGACT
TTTCTAAGCTGCCTATACGGCAGTGAAC	CGGGTATGTTTGCCAGTCTGTTTGCAGCAGAC
TTTCTAAGCTGCCTATACGGCAGTGAAC	TTTCGAGTGCGTGCCGCAACCCGTCAGGCAAG
TTTCTAAGCTGCCTATACGGCAGTGAAC

>NZ_QZDG01000017|2|2|70763-71752|PILER-CR
TTTCTAAGCTGCCTATGCGGCAGTGAAC	ACTAATCGTTTTAAATCGGATCATCGGCATATC
TTTCTAAGCTGCCTATGCGGCAGTGAAC	TCACGCGATGAACGAAAGGATCAGGAAAAGGA
TTTCTAAGCTGCCTATGCGGCAGTGAAC	TTCCAAATCAACGCGTTGCACGCCCTCAACAT
TTTCTAAGCTGCCTATGCGGCAGTGAAC	ATCAGGTGGAAGTTGCGCTAGTTGCCTGGCGT
TTTCTAAGCTGCCTATGCGGCAGTGAAC	GTAAAGTTGGCATCGGCGACGTATTTATTCCA
TTTCTAAGCTGCCTATGCGGCAGTGAAC	ATCCGTTTTTTCAAGTTGAATGCTGGCCAGGCT
TTTCTAAGCTGCCTATACGGCAGTGAAC	ATCCTTCATTGATAACTGGTATCACTGCTCCT
TTTCTAAGCTGCCTATACGGCAGTGAAC	ATACCGGATTTCGGACTGACAATCCTCAGGTA
TTTCTAAGCTGCCTATACGGCAGTGAAC	AGTATCAGCCAGACGAAAACCGACTTTTTCAC
TTTCTAAGCTGCCTATACGGCAGTGAAC	TTTTCCCACTCACGCAGAAAGACTATATGCGT
TTTCTAAGCTGCCTATACGGCAGTGAAC	CCATACCTTCAACCTCAGTGAAGTATTTCTCA
TTTCTAAGCTGCCTATACGGCAGTGAAC	TTCGCCGATTTGCGGGTGTATGTCATGCTCAT
TTTCTAAGCTGCCTATACGGCAGTGAAC	GACCCGGCGATTGATGAGATGGAACGAGCGCT
TTTCTAAGCTGCCTATACGGCAGTGAAC	AAATTCCTCTGCTCCGCATGGGTATTATGACT
TTTCTAAGCTGCCTATACGGCAGTGAAC	CGGGTATGTTTGCCAGTCTGTTTGCAGCAGAC
TTTCTAAGCTGCCTATACGGCAGTGAAC	TTTCGAGTGCGTGCCGCAACCCGTCAGGCAAG
TTTCTAAGCTGCCTATACGGCAGTGAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_QZDG01000017.1\|WP_119872013.1\|65191_65806_+\|YitT-family-protein	unknown	unknown	gnl\|CDD\|224203
NZ_QZDG01000017.1\|WP_119872008.1\|73023_76326_+\|type-I-F-CRISPR-associated-helicase-Cas3	cas3f	cd09673_cas3f_CAS-I-F	gnl\|CDD\|274201
NZ_QZDG01000017.1\|WP_119872009.1\|72046_73027_+\|type-I-F-CRISPR-associated-endonuclease-Cas1	cas1	cd09718_cas1_CAS-I-F	gnl\|CDD\|132676
NZ_QZDG01000017.1\|WP_119872007.1\|76718_78053_+\|type-I-F-CRISPR-associated-protein-Csy1	cas8f	cd09675_cas8f_CAS-I-F	gnl\|CDD\|187866
NZ_QZDG01000017.1\|WP_094432328.1\|81365_81785_-\|YjbQ-family-protein	unknown	unknown	gnl\|CDD\|376651
NZ_QZDG01000017.1\|WP_119872012.1\|65869_67063_+\|aspartate/tyrosine/aromatic-aminotransferase	unknown	unknown	gnl\|CDD\|181731
NZ_QZDG01000017.1\|WP_119872005.1\|78995_80006_+\|type-I-F-CRISPR-associated-protein-Csy3	cas7f	pfam09615_cas7f_CAS-I-F	gnl\|CDD\|378222
NZ_QZDG01000017.1\|WP_119872006.1\|78049_78982_+\|type-I-F-CRISPR-associated-protein-Csy2	cas5f	cd09676_cas5f_CAS-I-F	gnl\|CDD\|378221
NZ_QZDG01000017.1\|WP_119872010.1\|69189_69600_-\|DUF1240-domain-containing-protein	unknown	unknown	gnl\|CDD\|336520
NZ_QZDG01000017.1\|WP_119872011.1\|68750_69158_-\|DUF1240-domain-containing-protein	unknown	unknown	gnl\|CDD\|336520
NZ_QZDG01000017.1\|WP_014916572.1\|67768_68248_+\|Hcp-family-type-VI-secretion-system-effector	unknown	unknown	gnl\|CDD\|213799
NZ_QZDG01000017.1\|WP_052902943.1\|80015_80570_+\|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4	cas6f	cd09739_cas6f_CAS-I-F:CAS-IV	gnl\|CDD\|378224
NZ_QZDG01000017.1\|WP_119872004.1\|81800_84635_-\|excinuclease-ABC-subunit-UvrA	unknown	unknown	gnl\|CDD\|234734
NZ_QZDG01000017.1\|WP_039278469.1\|67146_67644_+\|M48-family-metallopeptidase	unknown	unknown	gnl\|CDD\|224368
NZ_QZDG01000017.1\|WP_039278475.1\|63317_63545_-\|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|226863
NZ_QZDG01000017.1\|WP_158586010.1\|76520_76682_+\|hypothetical-protein	unknown	unknown	unknown
NZ_QZDG01000017.1\|WP_039278467.1\|68297_68705_-\|DUF1240-domain-containing-protein	unknown	unknown	gnl\|CDD\|336520
NZ_QZDG01000017.1\|WP_010295086.1\|64461_64941_+\|Lrp/AsnC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224439
NZ_QZDG01000017.1\|WP_039283288.1\|84884_85427_+\|single-stranded-DNA-binding-protein-SSB1	unknown	unknown	gnl\|CDD\|236362
NZ_QZDG01000017.1\|WP_039278477.1\|62904_63321_-\|type-II-toxin-antitoxin-system-VapC-family-toxin	unknown	unknown	gnl\|CDD\|350229

Protein	Function_ID	Function_description	E-value
NZ_QZDG01000017.1\|WP_119872013.1\|65191_65806_+\|YitT-family-protein	gnl\|CDD\|224203	COG1284, COG1284, Uncharacterized conserved protein [Function unknown].	3.04058e-40
NZ_QZDG01000017.1\|WP_119872008.1\|73023_76326_+\|type-I-F-CRISPR-associated-helicase-Cas3	gnl\|CDD\|274201	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST. The helicase in many CRISPR-associated (cas) gene clusters is designated Cas3, and most Cas3 proteins are described by model TIGR01587. Members of this family are considerably larger, show a number of motifs in common with TIGR01587 sequences, and replace Cas3 in some CRISPR/cas loci in a number of Proteobacteria, including Yersinia pestis, Chromobacterium violaceum, Erwinia carotovora subsp. atroseptica SCRI1043, Photorhabdus luminescens subsp. laumondii TTO1, Legionella pneumophila, etc.	0
NZ_QZDG01000017.1\|WP_119872009.1\|72046_73027_+\|type-I-F-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|132676	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the YPEST subtype of CRISPR/Cas system.	0
NZ_QZDG01000017.1\|WP_119872007.1\|76718_78053_+\|type-I-F-CRISPR-associated-protein-Csy1	gnl\|CDD\|187866	cd09735, Csy1_I-F, CRISPR/Cas system-associated protein Csy1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins; Predicted subunit of the Cascade complex; signature gene for I-F subtype; also known as Csy1 family.	0
NZ_QZDG01000017.1\|WP_094432328.1\|81365_81785_-\|YjbQ-family-protein	gnl\|CDD\|376651	pfam01894, UPF0047, Uncharacterized protein family UPF0047. This family has no known function. The alignment contains a conserved aspartate and histidine that may be functionally important.	1.75771e-59
NZ_QZDG01000017.1\|WP_119872012.1\|65869_67063_+\|aspartate/tyrosine/aromatic-aminotransferase	gnl\|CDD\|181731	PRK09257, PRK09257, aromatic amino acid transaminase.	0
NZ_QZDG01000017.1\|WP_119872005.1\|78995_80006_+\|type-I-F-CRISPR-associated-protein-Csy3	gnl\|CDD\|378222	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2463 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy3, for CRISPR/Cas Subtype Ypest protein 3.	0
NZ_QZDG01000017.1\|WP_119872006.1\|78049_78982_+\|type-I-F-CRISPR-associated-protein-Csy2	gnl\|CDD\|378221	pfam09614, Cas_Csy2, CRISPR-associated protein (Cas_Csy2). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2464 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy2, for CRISPR/Cas Subtype Ypest protein 2.	9.30471e-156
NZ_QZDG01000017.1\|WP_119872010.1\|69189_69600_-\|DUF1240-domain-containing-protein	gnl\|CDD\|336520	pfam06836, DUF1240, Protein of unknown function (DUF1240). This family consists of a number of hypothetical putative membrane proteins which seem to be specific to Yersinia pestis. The function of this family is unknown.	6.91772e-31
NZ_QZDG01000017.1\|WP_119872011.1\|68750_69158_-\|DUF1240-domain-containing-protein	gnl\|CDD\|336520	pfam06836, DUF1240, Protein of unknown function (DUF1240). This family consists of a number of hypothetical putative membrane proteins which seem to be specific to Yersinia pestis. The function of this family is unknown.	1.46761e-39
NZ_QZDG01000017.1\|WP_014916572.1\|67768_68248_+\|Hcp-family-type-VI-secretion-system-effector	gnl\|CDD\|213799	TIGR03344, VI_effect_Hcp1, type VI secretion system effector, Hcp1 family. This family includes Hcp1 (hemolysin coregulated protein 1), an exported, homohexameric ring-forming virulence protein from Pseudomonas aeruginosa. Hcp1 lacks a conventional signal sequence and is instead exported by means of the type VI secretion system, encoded by a pathogenicity cluster of a class previously designated IAHP (IcmF-associated homologous protein). Homologs of Hcp1, in this protein family, are found in various bacteria of which most but not all are known pathogens. Pathogens may have many multiple members of this family, with three to ten in Erwinia carotovora, Yersinia pestis, uropathogenic Escherichia coli, and the insect pathogen Photorhabdus luminescens. [Cellular processes, Pathogenesis].	7.94409e-79
NZ_QZDG01000017.1\|WP_052902943.1\|80015_80570_+\|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4	gnl\|CDD\|378224	pfam09618, Cas_Csy4, CRISPR-associated protein (Cas_Csy4). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This protein family, typified by YPO2462 of Yersinia pestis, is a CRISPR-associated (Cas) family strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy4, for CRISPR/Cas Subtype Ypest protein 4.	1.4589e-98
NZ_QZDG01000017.1\|WP_119872004.1\|81800_84635_-\|excinuclease-ABC-subunit-UvrA	gnl\|CDD\|234734	PRK00349, uvrA, excinuclease ABC subunit UvrA.	0
NZ_QZDG01000017.1\|WP_039278469.1\|67146_67644_+\|M48-family-metallopeptidase	gnl\|CDD\|224368	COG1451, COG1451, Predicted metal-dependent hydrolase [General function prediction only].	1.93989e-29
NZ_QZDG01000017.1\|WP_039278475.1\|63317_63545_-\|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein	gnl\|CDD\|226863	COG4456, VagC, Virulence-associated protein and related proteins [Function unknown].	6.04187e-10
NZ_QZDG01000017.1\|WP_039278467.1\|68297_68705_-\|DUF1240-domain-containing-protein	gnl\|CDD\|336520	pfam06836, DUF1240, Protein of unknown function (DUF1240). This family consists of a number of hypothetical putative membrane proteins which seem to be specific to Yersinia pestis. The function of this family is unknown.	1.46931e-32
NZ_QZDG01000017.1\|WP_010295086.1\|64461_64941_+\|Lrp/AsnC-family-transcriptional-regulator	gnl\|CDD\|224439	COG1522, Lrp, Transcriptional regulators [Transcription].	3.9428e-34
NZ_QZDG01000017.1\|WP_039283288.1\|84884_85427_+\|single-stranded-DNA-binding-protein-SSB1	gnl\|CDD\|236362	PRK09010, PRK09010, single-stranded DNA-binding protein; Provisional.	1.20048e-109
NZ_QZDG01000017.1\|WP_039278477.1\|62904_63321_-\|type-II-toxin-antitoxin-system-VapC-family-toxin	gnl\|CDD\|350229	cd09881, PIN_VapC4-5_FitB-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC4 and VapC5, and Neisseria gonorrhoeae FitB and related proteins. This family includes the Virulence associated protein C (VapC)-like PIN (PilT N terminus) domain of Mycobacterium tuberculosis VapC4 and VapC5 ribonuclease toxins of the VapBC toxin/antitoxin (TA) system, and Neisseria gonorrhoeae FitB toxin of the FitAB TA system. This family belongs to the VapC-like family of the PIN domain nuclease superfamily. VapC is the PIN-domain ribonuclease toxin from prokaryotic VapBC toxin-antitoxin (TA) systems. VapB is a transcription factor-like protein antitoxin acting as an inhibitor. Other members of the VapC-like nuclease family include eukaryotic ribonucleases such as Smg6, ribosome assembly factor NOB1, exosome subunit Rrp44 endoribonuclease and rRNA-processing protein Fcf1. The structural properties of the PIN (PilT N terminus) domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions, in some members, additional metal coordinating residues can be found. Some members of the superfamily lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	1.28697e-47

>NZ_QZDG01000017.1|WP_119872010.1|69189_69600_-|DUF1240-domain-containing-protein
MVKINRPFFFIYSVFIFLLSCWGGWFSLSGYIDFFNLNDVISFSWKLGVIIFLVPIVFQFSYFGFFSAVKNRPIKMNNKISNALVIFAIFGTVVSLFSSMYISYSLNEQGYKICPKNSWIAPNKYVRNIALCKEQM
>NZ_QZDG01000017.1|WP_119872011.1|68750_69158_-|DUF1240-domain-containing-protein
MVKVNRPLVGAFAVFLFFISCFISWISFNGYLSFLQKSDVIIFSWKLGLMVFGSPLLFYFSYLAFYSAIKNEVPKMNNKLANSLAVVAIFGAVVSFFSSTYISYDLNDQDYKTCPKNSWIAPNKYVKDISLCDEW
>NZ_QZDG01000017.1|WP_039278467.1|68297_68705_-|DUF1240-domain-containing-protein
MFKINRPLSFAFSVLTFILTCWGIWFSFNGYWNLFRLNDVIIFSWKVGILIFGAPILFYFSYLGFYMAVKNKPIGMHGILASVCGYLFFIGVVVSFVASMYISFNFREQGYEICPKNSWMDPNKYVKNIALCDEW
>NZ_QZDG01000017.1|WP_014916572.1|67768_68248_+|Hcp-family-type-VI-secretion-system-effector
MANLIYASINGQKQGLISSGCSTLDSIGNRYQTGHEDQIQVLGLNHSISREQNVAHHPIHFIKPIDKSSPLLGMAISYNEKVDVTFYFYRVNSAGQLELYYEVTLTDASIVDVTCVYPHVIDNNDIMPYEKVQLKYKTIAWNHKIAGTSGYSIWEEMSL
>NZ_QZDG01000017.1|WP_039278469.1|67146_67644_+|M48-family-metallopeptidase
MTQLRYLNGYPPAIVAQVQTLLDQGKLGLWLEKRYPDRHPIQSDKSLYQFVAELKQRYLKNAPAISKVLYDNKQNPIKGTLGTNTFVARVQGGKLKSNNEIRIATLFRDGPEDFLRMIVVHELAHLKEKDHNKAFYQLCCHMDPDYHQLEFDMRIWLNWREINAG
>NZ_QZDG01000017.1|WP_119872012.1|65869_67063_+|aspartate/tyrosine/aromatic-aminotransferase
MFQNVDTYAGDPILSLMEKFKQDPRADKINLSIGLYYNEQNIIPQLRSVSAAESSLKQPAQSASSYLPMEGLQPYRTAIQQLLFGENHAALEAGRIATIQTLGGSGALKVGADFLKRYFPNSEVWVSDPTWENHIAIFEGAGFNVHTYPYFDGENLGVKFDAMLATLQALPARSIVLLHPCCHNPTGSDLTTEQWDRVIEVIIQRELIPFMDIAYQGFGLGIEQDAYAIRAVARAGVPALIANSFSKIFSLYSERVGGLSVVCDDADSAQRVLGQLKATVRRNYSSPPNFGAQVVSKVLNDAQLNADWKAEVEEMRTRILSMRQELVSALKNALPNRNFDYLLTQRGMFSYTGFSPEQVDRLREEFGVYLIASGRMCMAGLNHSNVQRVAAAFAAIQ
>NZ_QZDG01000017.1|WP_119872013.1|65191_65806_+|YitT-family-protein
MDNVIPTQKLSHTLLEDILAILIGTLMVSFGVILLRQAGALTGGTAGIAFLIHYLTNVSFGVAFFLLNLPFYYLALRRMGWEFTVKTFCAVGLVSLFSDLHPMFVHFDQLNPFYATLFGNIITGIGFVVLFRHKASLGGMNILALYLQDKYGLRAGKLQMGVDVVIVLTSLFVVSIPMLVASILGATILNLIIAMNHRPGRYAA
>NZ_QZDG01000017.1|WP_010295086.1|64461_64941_+|Lrp/AsnC-family-transcriptional-regulator
MYHIDDFDLKILTLLQTNGRLTNQELSDLVGLSASQCSRRRIALEQAQLILGYHARLSPNAVGLECLGLIEVRLINHTSEYVERFHQMLGEVDAIIDAYKTTGDADYLLKVAVADLPGLSTLISQILSQNKSVAHLKTSVVLNRLKENGLMMPELPALP
>NZ_QZDG01000017.1|WP_039278475.1|63317_63545_-|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein
MRIVSVFKNGNNRAIRLPRDMDFEGVNELEIVREGDTIMLRPVKPNWHSFLQEDRADADFMTERQDVVEEGRFKL
>NZ_QZDG01000017.1|WP_039278477.1|62904_63321_-|type-II-toxin-antitoxin-system-VapC-family-toxin
MSRLFMLDTNICSFIMREHPAEVIEKLQQCTLRRDRIVVSAITYAEMRFGAVGKKASPRHMQLVDAFCRRLDAVLPWDSAAVDATTKIKIELAAAGTPIGPNDTAIAGHAISAKAILVTNNLREFERVPGLTLEDWVK
>NZ_QZDG01000017.1|WP_119872009.1|72046_73027_+|type-I-F-CRISPR-associated-endonuclease-Cas1
MDNAFSPSDLKTILHSKRANVYYLQHCRILVNGGRVEYVTEEGNQSLYWNIPIANTSVVMLGTGTSVTQAAMREFARAGVMIGFCGGGGTPLFAANEAEVAVSWLSPQSEYRPTEYLQDWVSFWFDDEKRLAAAIAFQQVRIIQIRQHWLGSRLSRESRFTFKADHLQALLDRYEKGLTDCRTSNDVLVQEAMMTKALYKLAANAVSYGDFTRAKRGGGTDLANRFLDHGNYLAYGLAAVATWVLGLPHGLAVLHGKTRRGGLVFDVADLIKDALVLPQAFIAAMEGEDEQEFRQRCLTAFQQSEALDVMIGSLQDVASKLSQVGR
>NZ_QZDG01000017.1|WP_119872008.1|73023_76326_+|type-I-F-CRISPR-associated-helicase-Cas3
MNILLISECNKRALVETRRILDQFAERKGERTWQTAITQEGLNTLRKLLRKTARRNTAVACHWVRSANHTELLWIVGNLRRFNAQGSVPTNTTSRDILRSKDENPWHSAEVFSLLAAIAGLFHDVGKANALFQTGLSGTGPRSQPYRHEWVSLRLFQAFVGEQDDKGWLTALSTVTPEAEIPLLAALQRDKQTPSSSPFRTLPPLAQVIAWLIVSHHRLPVFNKSAELAPNSSEPQLDYAETWLTDHLSAQWNALNHCKLDVTPANLAQVWQFPHGTPLRSSVWREKARKFADRALKLPSFMHFAQLDQRLTVHLARLALMLADHHYSAGAATVGWQDMAYSVWANTDRKTGEYKQRLDEHCVGVGQNALLLGRSLPNLRDTLPAITRHKGFRQRSTHPRFRWQDRAFDLACSIRESSRQHGFFGVNMASTGRGKTFANARIMYGLSDETLGCRFSVALGLRTLTLQTGDALRQRLKLDEDDLAVLIGSQAVQDLHEMQLENETRQQNTAQTGSESADPLFSEHQYVRYDGSLDDGRLKTWLERSPTLHQLLSAPVLITTIDHLMPATESLRGGHQIAPMLRLLTSDLVLDEPDDFGLEDLPALCRLVNWAGMLGSRVLLSSATLPPALIRALFGAYLDGRAAWQQAYGTPNTPLNVCCGWFDEFDCQHEQYGDVKGFITRHDAFVQQRLKHLTKEELPLRLASIVPVSSPSKNKDDVHLAVAQAIHPLLRDLHSQHHQQHKSGKTASLGLVRMANINPLVAVARQLLAIPSPPDTCIHYCIYHSQHPLAMRSYIEQRLDAALMRNDADALWQVDEIRQAIENAPQQHHIFVVLATSVAEVGRDHDYDWAIVEPSSMRSFIQLAGRILRHRQDEQHVPKMPNICLLSHNIRALKDEDVAYCKPGFESDDEQLTTHDLRQLLQEEDYRHLNAAPRIVQPAPLTKPFSLVALEHAVLGKTLLGLTNQKLDDLKRPPAAFWWRAHPHWNGELQRRTPFRKSDRDEPYTLWIADDDEDAVFMIPDDGPSKWKQSDVIRPTSLHMAEGVCAWIDPDYHALYQRLADEKQWELKRVSARFGEIRLREKEEKDWLWHPLLGVFGALN
>NZ_QZDG01000017.1|WP_158586010.1|76520_76682_+|hypothetical-protein
MKRVRTIWLAALLVAVLVVILCMKPMNMYINNQADSSAKGQQFSIFSLTINKI
>NZ_QZDG01000017.1|WP_119872007.1|76718_78053_+|type-I-F-CRISPR-associated-protein-Csy1
MGSEKLTEFILSYINNRKQAKLDAFDKEAEKKRAVLSGEALAAEELDLAEKRREIEQKHEVRAWLSDAASRAGQISLVTHALKFTHSDAKGTSVFSTGTVADAKTLSTATLAQPAIDAVGNAAALDVAKLLQTEHDGDSLVAALQRGDHRALEKLAENPEQLAQWLVGFQQVFTDRQPSSHKLAKQIYFPIANGEYHLLSPLYSSSLAQALHQRINAVRFGEEAKAIRQAQKANQWHEQLSISYPYLAVQNMGGTKPQNISSLNSSRSGRSYLLSSAPPQWNSIEKPPQQHDSIFRPRGEVDYHTRATLAQMQRFLLSVKEVENNRDIRQQRLRYLDQLIDQLFFYVASVQNLPSGWSAESELKRAQQLWLDPYRAETDTVFRREREAGDWQKAVAYDFGRWLNRRLKHEDLIFGEVERREWSTAALFKRRMREMESALKEDLA
>NZ_QZDG01000017.1|WP_119872006.1|78049_78982_+|type-I-F-CRISPR-associated-protein-Csy2
MSTLLILRRIKVENANAIAGLTYGFPAITHFLGFTHALSRKLQASHGLTLEGCGVVSHQHQLHAYGSSWERSFALTRNPLTKEAKTAAFNEEGRMHMTVSLLIRCEGQIPADTTALCDFLTQQAQCQRLAGGTIVDIERVTIQSLPSDEAETRKVMRRLLPGFVLKDRTSLLHDHFQTLQQDNPQAELVDAWLDFAALKMRAERDPNGSNVQWQYQPKPGGGGFLIPLMIGYRAISPLYAPGEVDKTRDPNTPFCFAEAAYGIGEWQGAHRISDIRQILWEYDYQNGDYHCRQLADTHSAAEDISYEFDD
>NZ_QZDG01000017.1|WP_119872005.1|78995_80006_+|type-I-F-CRISPR-associated-protein-Csy3
MAKASTSLKTASVLAFERKLANSDAVMYAGNWAQQDNWTPIAIQEKSVRGTISNRLKNALTSDPAKLDAEIQKANLQTVDVAALPFGADTLKVVFTLRVLGNLAQPSVCNDQDYQTALGNIITGYAQGQGFGTLAARYAENIANGRFLWRNRVGAEAIRVVVTTGEQRWEFNGEDYSLRAFSQPTGDLAALAQAIEQGLAGDTSVLFTVEAYVQLGNGQEVFPSQELVLDEKARNGKSKILYQVNDVAAIHSQKIGNALRTVDDWYPAADEAGPIAVEPYGSVTSRGKAYRQPKEKMDFYTLLDNWVIKGDVPAPEQQHYVIATLIRGGVFGEKGE
>NZ_QZDG01000017.1|WP_052902943.1|80015_80570_+|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4
MDHYIDIRVQPDPEFTASQLLNALFAKLHRALGQVADGKIGISFPDVGKTLGECLRLHGTKEALSTLEQTAWLKGLRDYTQVSECKTVPDGVKFRTVRRVQLKSSAERLRRRSVNKGWLTEAEAAARIPDAVEKRSALPFVQIKSLSNGQMFFVFVEHGPLQDAPIAGRFSSYGLSAEATVPWF
>NZ_QZDG01000017.1|WP_094432328.1|81365_81785_-|YjbQ-family-protein
MWMQYEIRLKPKARGFHLVTDEILAQVTGLRQINVGLMQVFIKHTSAALTINENADPTVRQDFESFFNRLVPEDEPYYRHTYEGSDDMPAHLKGSLLGNSLTLPITNGRLNIGTWQGIYLCEHRNHGGNRSLVVTLHGE
>NZ_QZDG01000017.1|WP_119872004.1|81800_84635_-|excinuclease-ABC-subunit-UvrA
MDKIEVRGARTHNLKNINLIIPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPEHDVPLDAQTVSQMVDNVLAQPEGKRLMLLAPIVKDRKGEHSKTLENLASQGYIRARIDGEVCDLSDPPKLELQKKHTIEVVVDRFKVREDLAQRLAESFETALDLSGGSVVVADMDDPTQPELLFSANFACPVCGYSMHELEPRMFSFNNPAGACPSCDGLGVQQFFDPSRVVQNAELSLAGGAIRGWDRRNFYYFQMLRSLAEHYKFDVDAPFESLSAAVQKVILYGSGKENVEFKYINDRGDTSVRRHPFEGVLHNMERRYKETESTAVREELAKFISNRSCASCGGTRLREEARNVFVEQTTLPQISDMSIGHAMTFFQNMKLSGQRAQIAEKVLKEIGDRLKFLVNVGLNYLSLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLETLIHLRNLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGQIVAEGTMEEIMAVPDSLTGQFLSGKRKIEIPQQRVPADPTKVLKLIGAKGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPLAQRQLNGATLAEPAAHREIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGIFTPIRELFAGVPEARTRGYNPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDVYVPCDQCKGKRYNRETLEIQYKGKGIHEVLDMTIEEARGFFDAIPALARKLQTLIDVGLSYIRLGQSATTLSGGEAQRVKLSRELSKRGTGQTLYILDEPTTGLHFADIQQLLTVLHQLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEQSHTARFLWPILAREA
>NZ_QZDG01000017.1|WP_039283288.1|84884_85427_+|single-stranded-DNA-binding-protein-SSB1
MASRGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGEQKEKTEWHRVVLFGKLAEVAGEYLRKGSQVYIEGALQTRKWADQAGVERYTTEVVVNVGGTMQMLGGRQGGGAPAGGNAGGGQQQGGWGQPQQPQGGNQFSGGAQSQQRPAQNSAPAQSNEPPMDFDDDIPF

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_QZDG01000017_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_QZDG01000017_3

80699-81326

TypeI-F

I-F

Consensus_repeat	Method
GTTCACTGCCGTATAGGCAGCTTAGAAA	CRISPRCasFinder
GTTCACTGCCGTATAGGCAGCTTAGAAA	CRT
GTTCACTGCCGCATAGGCAGCTTAGAAA	PILER-CR

10 spacers

cas6f,cas7f,cas5f,cas8f,cas3f,cas1

The CRISPR arrays of NZ_QZDG01000017_3

>merge|NZ_QZDG01000017|3|80699-81326|CRISPRCasFinder,CRT,PILER-CR
GTTCACTGCCGTATAGGTAGCTTAGAAACGGCGCTGAAAGCCTATAAAGGACGCCAGAGCGTTCACTGCCGTATAGGTAGCTTAGAAATTGACTGGACGCAGCGAATTAAAGAAGACGGTGTTCACTGCCGTATAGGTAGCTTAGAAACGCCGCGAAATGTCACCAACATAAACCATAACGTTCACTGCCGTATAGGCAGCTTAGAAAAATGGAAAATTGCTGCGATGTCGGCCATCACCGTTCACTGCCGTATAGGCAGCTTAGAAATGATTAGAAAACGTCTGTACCATCTGGAAAAAGTTCACTGCCGTATAGGCAGCTTAGAAAATACAGAAAGGCTTCATTAGCCGGCCGCTGTTGTTCACTACCGCATAGGCAGCTTAGAAAAGCAGTTGTAGAGAGCTGGAGGGTGGTTGCATGTTCACTGCCGCATAGGCAGCTTAGAAATGCCACCGGACCAGATGAAGGGGACCGACAGTGTTCACTGTCGCATAGGCAGCTTAGAAACGTGGGGTGCCACTTTGTTTGATGCTCCAGACGTTCACTGCCGTATAAGCAGTTTAGAAAAGGGCGCGTGGGTGCGACTGGAAGATAAAGAGGTTCACTGCCGTGCAGGCAGCTCAGTGC

>NZ_QZDG01000017|3|3|80699-81326|CRISPRCasFinder
GTTCACTGCCGTATAGGTAGCTTAGAAA	CGGCGCTGAAAGCCTATAAAGGACGCCAGAGC
GTTCACTGCCGTATAGGTAGCTTAGAAA	TTGACTGGACGCAGCGAATTAAAGAAGACGGT
GTTCACTGCCGTATAGGTAGCTTAGAAA	CGCCGCGAAATGTCACCAACATAAACCATAAC
GTTCACTGCCGTATAGGCAGCTTAGAAA	AATGGAAAATTGCTGCGATGTCGGCCATCACC
GTTCACTGCCGTATAGGCAGCTTAGAAA	TGATTAGAAAACGTCTGTACCATCTGGAAAAA
GTTCACTGCCGTATAGGCAGCTTAGAAA	ATACAGAAAGGCTTCATTAGCCGGCCGCTGTT
GTTCACTACCGCATAGGCAGCTTAGAAA	AGCAGTTGTAGAGAGCTGGAGGGTGGTTGCAT
GTTCACTGCCGCATAGGCAGCTTAGAAA	TGCCACCGGACCAGATGAAGGGGACCGACAGT
GTTCACTGTCGCATAGGCAGCTTAGAAA	CGTGGGGTGCCACTTTGTTTGATGCTCCAGAC
GTTCACTGCCGTATAAGCAGTTTAGAAA	AGGGCGCGTGGGTGCGACTGGAAGATAAAGAG
GTTCACTGCCGTGCAGGCAGCTCAGTGC

>NZ_QZDG01000017|3|3|80699-81326|CRT
GTTCACTGCCGTATAGGTAGCTTAGAAA	CGGCGCTGAAAGCCTATAAAGGACGCCAGAGC
GTTCACTGCCGTATAGGTAGCTTAGAAA	TTGACTGGACGCAGCGAATTAAAGAAGACGGT
GTTCACTGCCGTATAGGTAGCTTAGAAA	CGCCGCGAAATGTCACCAACATAAACCATAAC
GTTCACTGCCGTATAGGCAGCTTAGAAA	AATGGAAAATTGCTGCGATGTCGGCCATCACC
GTTCACTGCCGTATAGGCAGCTTAGAAA	TGATTAGAAAACGTCTGTACCATCTGGAAAAA
GTTCACTGCCGTATAGGCAGCTTAGAAA	ATACAGAAAGGCTTCATTAGCCGGCCGCTGTT
GTTCACTACCGCATAGGCAGCTTAGAAA	AGCAGTTGTAGAGAGCTGGAGGGTGGTTGCAT
GTTCACTGCCGCATAGGCAGCTTAGAAA	TGCCACCGGACCAGATGAAGGGGACCGACAGT
GTTCACTGTCGCATAGGCAGCTTAGAAA	CGTGGGGTGCCACTTTGTTTGATGCTCCAGAC
GTTCACTGCCGTATAAGCAGTTTAGAAA	AGGGCGCGTGGGTGCGACTGGAAGATAAAGAG
GTTCACTGCCGTGCAGGCAGCTCAGTGC

>NZ_QZDG01000017|3|3|80879-81206|PILER-CR
GTTCACTGCCGTATAGGCAGCTTAGAAA	AATGGAAAATTGCTGCGATGTCGGCCATCACC
GTTCACTGCCGTATAGGCAGCTTAGAAA	TGATTAGAAAACGTCTGTACCATCTGGAAAAA
GTTCACTGCCGTATAGGCAGCTTAGAAA	ATACAGAAAGGCTTCATTAGCCGGCCGCTGTT
GTTCACTACCGCATAGGCAGCTTAGAAA	AGCAGTTGTAGAGAGCTGGAGGGTGGTTGCAT
GTTCACTGCCGCATAGGCAGCTTAGAAA	TGCCACCGGACCAGATGAAGGGGACCGACAGT
GTTCACTGTCGCATAGGCAGCTTAGAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_QZDG01000017.1\|WP_119872006.1\|78049_78982_+\|type-I-F-CRISPR-associated-protein-Csy2	cas5f	cd09676_cas5f_CAS-I-F	gnl\|CDD\|378221
NZ_QZDG01000017.1\|WP_119872008.1\|73023_76326_+\|type-I-F-CRISPR-associated-helicase-Cas3	cas3f	cd09673_cas3f_CAS-I-F	gnl\|CDD\|274201
NZ_QZDG01000017.1\|WP_119872009.1\|72046_73027_+\|type-I-F-CRISPR-associated-endonuclease-Cas1	cas1	cd09718_cas1_CAS-I-F	gnl\|CDD\|132676
NZ_QZDG01000017.1\|WP_094432328.1\|81365_81785_-\|YjbQ-family-protein	unknown	unknown	gnl\|CDD\|376651
NZ_QZDG01000017.1\|WP_119872005.1\|78995_80006_+\|type-I-F-CRISPR-associated-protein-Csy3	cas7f	pfam09615_cas7f_CAS-I-F	gnl\|CDD\|378222
NZ_QZDG01000017.1\|WP_052902943.1\|80015_80570_+\|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4	cas6f	cd09739_cas6f_CAS-I-F:CAS-IV	gnl\|CDD\|378224
NZ_QZDG01000017.1\|WP_119872010.1\|69189_69600_-\|DUF1240-domain-containing-protein	unknown	unknown	gnl\|CDD\|336520
NZ_QZDG01000017.1\|WP_119872011.1\|68750_69158_-\|DUF1240-domain-containing-protein	unknown	unknown	gnl\|CDD\|336520
NZ_QZDG01000017.1\|WP_119872004.1\|81800_84635_-\|excinuclease-ABC-subunit-UvrA	unknown	unknown	gnl\|CDD\|234734
NZ_QZDG01000017.1\|WP_158586010.1\|76520_76682_+\|hypothetical-protein	unknown	unknown	unknown
NZ_QZDG01000017.1\|WP_119872007.1\|76718_78053_+\|type-I-F-CRISPR-associated-protein-Csy1	cas8f	cd09675_cas8f_CAS-I-F	gnl\|CDD\|187866
NZ_QZDG01000017.1\|WP_039278467.1\|68297_68705_-\|DUF1240-domain-containing-protein	unknown	unknown	gnl\|CDD\|336520
NZ_QZDG01000017.1\|WP_039283288.1\|84884_85427_+\|single-stranded-DNA-binding-protein-SSB1	unknown	unknown	gnl\|CDD\|236362
NZ_QZDG01000017.1\|WP_119872003.1\|85625_86622_-\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|372671

Protein	Function_ID	Function_description	E-value
NZ_QZDG01000017.1\|WP_119872006.1\|78049_78982_+\|type-I-F-CRISPR-associated-protein-Csy2	gnl\|CDD\|378221	pfam09614, Cas_Csy2, CRISPR-associated protein (Cas_Csy2). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2464 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy2, for CRISPR/Cas Subtype Ypest protein 2.	9.30471e-156
NZ_QZDG01000017.1\|WP_119872008.1\|73023_76326_+\|type-I-F-CRISPR-associated-helicase-Cas3	gnl\|CDD\|274201	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST. The helicase in many CRISPR-associated (cas) gene clusters is designated Cas3, and most Cas3 proteins are described by model TIGR01587. Members of this family are considerably larger, show a number of motifs in common with TIGR01587 sequences, and replace Cas3 in some CRISPR/cas loci in a number of Proteobacteria, including Yersinia pestis, Chromobacterium violaceum, Erwinia carotovora subsp. atroseptica SCRI1043, Photorhabdus luminescens subsp. laumondii TTO1, Legionella pneumophila, etc.	0
NZ_QZDG01000017.1\|WP_119872009.1\|72046_73027_+\|type-I-F-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|132676	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the YPEST subtype of CRISPR/Cas system.	0
NZ_QZDG01000017.1\|WP_094432328.1\|81365_81785_-\|YjbQ-family-protein	gnl\|CDD\|376651	pfam01894, UPF0047, Uncharacterized protein family UPF0047. This family has no known function. The alignment contains a conserved aspartate and histidine that may be functionally important.	1.75771e-59
NZ_QZDG01000017.1\|WP_119872005.1\|78995_80006_+\|type-I-F-CRISPR-associated-protein-Csy3	gnl\|CDD\|378222	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2463 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy3, for CRISPR/Cas Subtype Ypest protein 3.	0
NZ_QZDG01000017.1\|WP_052902943.1\|80015_80570_+\|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4	gnl\|CDD\|378224	pfam09618, Cas_Csy4, CRISPR-associated protein (Cas_Csy4). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This protein family, typified by YPO2462 of Yersinia pestis, is a CRISPR-associated (Cas) family strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy4, for CRISPR/Cas Subtype Ypest protein 4.	1.4589e-98
NZ_QZDG01000017.1\|WP_119872004.1\|81800_84635_-\|excinuclease-ABC-subunit-UvrA	gnl\|CDD\|234734	PRK00349, uvrA, excinuclease ABC subunit UvrA.	0
NZ_QZDG01000017.1\|WP_119872011.1\|68750_69158_-\|DUF1240-domain-containing-protein	gnl\|CDD\|336520	pfam06836, DUF1240, Protein of unknown function (DUF1240). This family consists of a number of hypothetical putative membrane proteins which seem to be specific to Yersinia pestis. The function of this family is unknown.	1.46761e-39
NZ_QZDG01000017.1\|WP_119872010.1\|69189_69600_-\|DUF1240-domain-containing-protein	gnl\|CDD\|336520	pfam06836, DUF1240, Protein of unknown function (DUF1240). This family consists of a number of hypothetical putative membrane proteins which seem to be specific to Yersinia pestis. The function of this family is unknown.	6.91772e-31
NZ_QZDG01000017.1\|WP_119872007.1\|76718_78053_+\|type-I-F-CRISPR-associated-protein-Csy1	gnl\|CDD\|187866	cd09735, Csy1_I-F, CRISPR/Cas system-associated protein Csy1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins; Predicted subunit of the Cascade complex; signature gene for I-F subtype; also known as Csy1 family.	0
NZ_QZDG01000017.1\|WP_039278467.1\|68297_68705_-\|DUF1240-domain-containing-protein	gnl\|CDD\|336520	pfam06836, DUF1240, Protein of unknown function (DUF1240). This family consists of a number of hypothetical putative membrane proteins which seem to be specific to Yersinia pestis. The function of this family is unknown.	1.46931e-32
NZ_QZDG01000017.1\|WP_039283288.1\|84884_85427_+\|single-stranded-DNA-binding-protein-SSB1	gnl\|CDD\|236362	PRK09010, PRK09010, single-stranded DNA-binding protein; Provisional.	1.20048e-109
NZ_QZDG01000017.1\|WP_119872003.1\|85625_86622_-\|IS3-family-transposase	gnl\|CDD\|372671	pfam13683, rve_3, Integrase core domain.	4.63297e-29

>NZ_QZDG01000017.1|WP_052902943.1|80015_80570_+|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4
MDHYIDIRVQPDPEFTASQLLNALFAKLHRALGQVADGKIGISFPDVGKTLGECLRLHGTKEALSTLEQTAWLKGLRDYTQVSECKTVPDGVKFRTVRRVQLKSSAERLRRRSVNKGWLTEAEAAARIPDAVEKRSALPFVQIKSLSNGQMFFVFVEHGPLQDAPIAGRFSSYGLSAEATVPWF
>NZ_QZDG01000017.1|WP_119872005.1|78995_80006_+|type-I-F-CRISPR-associated-protein-Csy3
MAKASTSLKTASVLAFERKLANSDAVMYAGNWAQQDNWTPIAIQEKSVRGTISNRLKNALTSDPAKLDAEIQKANLQTVDVAALPFGADTLKVVFTLRVLGNLAQPSVCNDQDYQTALGNIITGYAQGQGFGTLAARYAENIANGRFLWRNRVGAEAIRVVVTTGEQRWEFNGEDYSLRAFSQPTGDLAALAQAIEQGLAGDTSVLFTVEAYVQLGNGQEVFPSQELVLDEKARNGKSKILYQVNDVAAIHSQKIGNALRTVDDWYPAADEAGPIAVEPYGSVTSRGKAYRQPKEKMDFYTLLDNWVIKGDVPAPEQQHYVIATLIRGGVFGEKGE
>NZ_QZDG01000017.1|WP_119872006.1|78049_78982_+|type-I-F-CRISPR-associated-protein-Csy2
MSTLLILRRIKVENANAIAGLTYGFPAITHFLGFTHALSRKLQASHGLTLEGCGVVSHQHQLHAYGSSWERSFALTRNPLTKEAKTAAFNEEGRMHMTVSLLIRCEGQIPADTTALCDFLTQQAQCQRLAGGTIVDIERVTIQSLPSDEAETRKVMRRLLPGFVLKDRTSLLHDHFQTLQQDNPQAELVDAWLDFAALKMRAERDPNGSNVQWQYQPKPGGGGFLIPLMIGYRAISPLYAPGEVDKTRDPNTPFCFAEAAYGIGEWQGAHRISDIRQILWEYDYQNGDYHCRQLADTHSAAEDISYEFDD
>NZ_QZDG01000017.1|WP_119872007.1|76718_78053_+|type-I-F-CRISPR-associated-protein-Csy1
MGSEKLTEFILSYINNRKQAKLDAFDKEAEKKRAVLSGEALAAEELDLAEKRREIEQKHEVRAWLSDAASRAGQISLVTHALKFTHSDAKGTSVFSTGTVADAKTLSTATLAQPAIDAVGNAAALDVAKLLQTEHDGDSLVAALQRGDHRALEKLAENPEQLAQWLVGFQQVFTDRQPSSHKLAKQIYFPIANGEYHLLSPLYSSSLAQALHQRINAVRFGEEAKAIRQAQKANQWHEQLSISYPYLAVQNMGGTKPQNISSLNSSRSGRSYLLSSAPPQWNSIEKPPQQHDSIFRPRGEVDYHTRATLAQMQRFLLSVKEVENNRDIRQQRLRYLDQLIDQLFFYVASVQNLPSGWSAESELKRAQQLWLDPYRAETDTVFRREREAGDWQKAVAYDFGRWLNRRLKHEDLIFGEVERREWSTAALFKRRMREMESALKEDLA
>NZ_QZDG01000017.1|WP_158586010.1|76520_76682_+|hypothetical-protein
MKRVRTIWLAALLVAVLVVILCMKPMNMYINNQADSSAKGQQFSIFSLTINKI
>NZ_QZDG01000017.1|WP_119872008.1|73023_76326_+|type-I-F-CRISPR-associated-helicase-Cas3
MNILLISECNKRALVETRRILDQFAERKGERTWQTAITQEGLNTLRKLLRKTARRNTAVACHWVRSANHTELLWIVGNLRRFNAQGSVPTNTTSRDILRSKDENPWHSAEVFSLLAAIAGLFHDVGKANALFQTGLSGTGPRSQPYRHEWVSLRLFQAFVGEQDDKGWLTALSTVTPEAEIPLLAALQRDKQTPSSSPFRTLPPLAQVIAWLIVSHHRLPVFNKSAELAPNSSEPQLDYAETWLTDHLSAQWNALNHCKLDVTPANLAQVWQFPHGTPLRSSVWREKARKFADRALKLPSFMHFAQLDQRLTVHLARLALMLADHHYSAGAATVGWQDMAYSVWANTDRKTGEYKQRLDEHCVGVGQNALLLGRSLPNLRDTLPAITRHKGFRQRSTHPRFRWQDRAFDLACSIRESSRQHGFFGVNMASTGRGKTFANARIMYGLSDETLGCRFSVALGLRTLTLQTGDALRQRLKLDEDDLAVLIGSQAVQDLHEMQLENETRQQNTAQTGSESADPLFSEHQYVRYDGSLDDGRLKTWLERSPTLHQLLSAPVLITTIDHLMPATESLRGGHQIAPMLRLLTSDLVLDEPDDFGLEDLPALCRLVNWAGMLGSRVLLSSATLPPALIRALFGAYLDGRAAWQQAYGTPNTPLNVCCGWFDEFDCQHEQYGDVKGFITRHDAFVQQRLKHLTKEELPLRLASIVPVSSPSKNKDDVHLAVAQAIHPLLRDLHSQHHQQHKSGKTASLGLVRMANINPLVAVARQLLAIPSPPDTCIHYCIYHSQHPLAMRSYIEQRLDAALMRNDADALWQVDEIRQAIENAPQQHHIFVVLATSVAEVGRDHDYDWAIVEPSSMRSFIQLAGRILRHRQDEQHVPKMPNICLLSHNIRALKDEDVAYCKPGFESDDEQLTTHDLRQLLQEEDYRHLNAAPRIVQPAPLTKPFSLVALEHAVLGKTLLGLTNQKLDDLKRPPAAFWWRAHPHWNGELQRRTPFRKSDRDEPYTLWIADDDEDAVFMIPDDGPSKWKQSDVIRPTSLHMAEGVCAWIDPDYHALYQRLADEKQWELKRVSARFGEIRLREKEEKDWLWHPLLGVFGALN
>NZ_QZDG01000017.1|WP_119872009.1|72046_73027_+|type-I-F-CRISPR-associated-endonuclease-Cas1
MDNAFSPSDLKTILHSKRANVYYLQHCRILVNGGRVEYVTEEGNQSLYWNIPIANTSVVMLGTGTSVTQAAMREFARAGVMIGFCGGGGTPLFAANEAEVAVSWLSPQSEYRPTEYLQDWVSFWFDDEKRLAAAIAFQQVRIIQIRQHWLGSRLSRESRFTFKADHLQALLDRYEKGLTDCRTSNDVLVQEAMMTKALYKLAANAVSYGDFTRAKRGGGTDLANRFLDHGNYLAYGLAAVATWVLGLPHGLAVLHGKTRRGGLVFDVADLIKDALVLPQAFIAAMEGEDEQEFRQRCLTAFQQSEALDVMIGSLQDVASKLSQVGR
>NZ_QZDG01000017.1|WP_119872010.1|69189_69600_-|DUF1240-domain-containing-protein
MVKINRPFFFIYSVFIFLLSCWGGWFSLSGYIDFFNLNDVISFSWKLGVIIFLVPIVFQFSYFGFFSAVKNRPIKMNNKISNALVIFAIFGTVVSLFSSMYISYSLNEQGYKICPKNSWIAPNKYVRNIALCKEQM
>NZ_QZDG01000017.1|WP_119872011.1|68750_69158_-|DUF1240-domain-containing-protein
MVKVNRPLVGAFAVFLFFISCFISWISFNGYLSFLQKSDVIIFSWKLGLMVFGSPLLFYFSYLAFYSAIKNEVPKMNNKLANSLAVVAIFGAVVSFFSSTYISYDLNDQDYKTCPKNSWIAPNKYVKDISLCDEW
>NZ_QZDG01000017.1|WP_039278467.1|68297_68705_-|DUF1240-domain-containing-protein
MFKINRPLSFAFSVLTFILTCWGIWFSFNGYWNLFRLNDVIIFSWKVGILIFGAPILFYFSYLGFYMAVKNKPIGMHGILASVCGYLFFIGVVVSFVASMYISFNFREQGYEICPKNSWMDPNKYVKNIALCDEW
>NZ_QZDG01000017.1|WP_094432328.1|81365_81785_-|YjbQ-family-protein
MWMQYEIRLKPKARGFHLVTDEILAQVTGLRQINVGLMQVFIKHTSAALTINENADPTVRQDFESFFNRLVPEDEPYYRHTYEGSDDMPAHLKGSLLGNSLTLPITNGRLNIGTWQGIYLCEHRNHGGNRSLVVTLHGE
>NZ_QZDG01000017.1|WP_119872004.1|81800_84635_-|excinuclease-ABC-subunit-UvrA
MDKIEVRGARTHNLKNINLIIPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPEHDVPLDAQTVSQMVDNVLAQPEGKRLMLLAPIVKDRKGEHSKTLENLASQGYIRARIDGEVCDLSDPPKLELQKKHTIEVVVDRFKVREDLAQRLAESFETALDLSGGSVVVADMDDPTQPELLFSANFACPVCGYSMHELEPRMFSFNNPAGACPSCDGLGVQQFFDPSRVVQNAELSLAGGAIRGWDRRNFYYFQMLRSLAEHYKFDVDAPFESLSAAVQKVILYGSGKENVEFKYINDRGDTSVRRHPFEGVLHNMERRYKETESTAVREELAKFISNRSCASCGGTRLREEARNVFVEQTTLPQISDMSIGHAMTFFQNMKLSGQRAQIAEKVLKEIGDRLKFLVNVGLNYLSLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLETLIHLRNLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGQIVAEGTMEEIMAVPDSLTGQFLSGKRKIEIPQQRVPADPTKVLKLIGAKGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPLAQRQLNGATLAEPAAHREIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGIFTPIRELFAGVPEARTRGYNPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDVYVPCDQCKGKRYNRETLEIQYKGKGIHEVLDMTIEEARGFFDAIPALARKLQTLIDVGLSYIRLGQSATTLSGGEAQRVKLSRELSKRGTGQTLYILDEPTTGLHFADIQQLLTVLHQLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEQSHTARFLWPILAREA
>NZ_QZDG01000017.1|WP_039283288.1|84884_85427_+|single-stranded-DNA-binding-protein-SSB1
MASRGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGEQKEKTEWHRVVLFGKLAEVAGEYLRKGSQVYIEGALQTRKWADQAGVERYTTEVVVNVGGTMQMLGGRQGGGAPAGGNAGGGQQQGGWGQPQQPQGGNQFSGGAQSQQRPAQNSAPAQSNEPPMDFDDDIPF
>NZ_QZDG01000017.1|WP_119872003.1|85625_86622_-|IS3-family-transposase
VHPINWKKKFGGMGVTELRRLRQLEEENHRLKRLVADLSLDKEMLQDVIRKKFLRPVQKREAVAYLLEAYRIGLRRGCRLMMQSRTVYHYRSCRDDRAITQRIREIAETRVRYGVQRIHTLLRREGWLINHKKTRRIYCQEGLNLRTKRPRRHVSARHRRARPGGSAIDQCWSMDFVADNLFNGRRIRALTVVDNFSRECLAIQVGQGLRGDDVVEVMERLKQLQKRVPGRLQTDNGSEFISKPLDQWAYENKVTMDFSRPGKPTDNALIESFNGSFRDECLNVHWFLSLEDAQEKVEYWRQEYNQQRPHSSLNNQTPEEFVRSLQKGPDL

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_QZDG01000017_1	1.2\|63939\|32\|NZ_QZDG01000017\|PILER-CR,CRISPRCasFinder,CRT	63939-63970	32	NZ_CP035512	Haematobacter massiliensis strain OT1 plasmid pOT1-2, complete sequence	229085-229116	6	0.812
NZ_QZDG01000017_1	1.2\|63939\|32\|NZ_QZDG01000017\|PILER-CR,CRISPRCasFinder,CRT	63939-63970	32	NZ_CP053206	Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1D, complete sequence	272886-272917	6	0.812
NZ_QZDG01000017_1	1.3\|63999\|32\|NZ_QZDG01000017\|PILER-CR,CRISPRCasFinder,CRT	63999-64030	32	NZ_CP029096	Pseudomonas aeruginosa strain AR439 plasmid unnamed2, complete sequence	3334-3365	7	0.781
NZ_QZDG01000017_1	1.3\|63999\|32\|NZ_QZDG01000017\|PILER-CR,CRISPRCasFinder,CRT	63999-64030	32	NZ_CP029096	Pseudomonas aeruginosa strain AR439 plasmid unnamed2, complete sequence	215953-215984	7	0.781
NZ_QZDG01000017_1	1.3\|63999\|32\|NZ_QZDG01000017\|PILER-CR,CRISPRCasFinder,CRT	63999-64030	32	NZ_CP029096	Pseudomonas aeruginosa strain AR439 plasmid unnamed2, complete sequence	254584-254615	7	0.781
NZ_QZDG01000017_1	1.3\|63999\|32\|NZ_QZDG01000017\|PILER-CR,CRISPRCasFinder,CRT	63999-64030	32	NZ_CP029096	Pseudomonas aeruginosa strain AR439 plasmid unnamed2, complete sequence	300901-300932	7	0.781
NZ_QZDG01000017_1	1.3\|63999\|32\|NZ_QZDG01000017\|PILER-CR,CRISPRCasFinder,CRT	63999-64030	32	NZ_CP029096	Pseudomonas aeruginosa strain AR439 plasmid unnamed2, complete sequence	380579-380610	7	0.781
NZ_QZDG01000017_1	1.3\|63999\|32\|NZ_QZDG01000017\|PILER-CR,CRISPRCasFinder,CRT	63999-64030	32	MT011984	Comamonas testosteroni strain NFYY023 plasmid pNFYY023-1, complete sequence	77174-77205	7	0.781
NZ_QZDG01000017_1	1.1\|63879\|32\|NZ_QZDG01000017\|PILER-CR,CRISPRCasFinder,CRT	63879-63910	32	NC_021289	Burkholderia insecticola plasmid p1, complete sequence	651004-651035	8	0.75
NZ_QZDG01000017_1	1.2\|63939\|32\|NZ_QZDG01000017\|PILER-CR,CRISPRCasFinder,CRT	63939-63970	32	NZ_CP019257	Escherichia coli strain 13TMH22 plasmid p13TMH22-1, complete sequence	13235-13266	8	0.75
NZ_QZDG01000017_1	1.2\|63939\|32\|NZ_QZDG01000017\|PILER-CR,CRISPRCasFinder,CRT	63939-63970	32	NZ_CP019274	Escherichia coli strain 13P477T plasmid p13P477T-1, complete sequence	2268-2299	8	0.75
NZ_QZDG01000017_1	1.2\|63939\|32\|NZ_QZDG01000017\|PILER-CR,CRISPRCasFinder,CRT	63939-63970	32	NZ_CP019275	Escherichia coli strain 13P477T plasmid p13P477T-2, complete sequence	20374-20405	8	0.75
NZ_QZDG01000017_1	1.2\|63939\|32\|NZ_QZDG01000017\|PILER-CR,CRISPRCasFinder,CRT	63939-63970	32	NZ_CP019279	Escherichia coli strain 13P477T plasmid p13P477T-6, complete sequence	12624-12655	8	0.75
NZ_QZDG01000017_1	1.2\|63939\|32\|NZ_QZDG01000017\|PILER-CR,CRISPRCasFinder,CRT	63939-63970	32	NZ_CP019246	Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence	16926-16957	8	0.75
NZ_QZDG01000017_1	1.2\|63939\|32\|NZ_QZDG01000017\|PILER-CR,CRISPRCasFinder,CRT	63939-63970	32	NC_049342	Escherichia phage 500465-1, complete genome	17590-17621	8	0.75
NZ_QZDG01000017_1	1.2\|63939\|32\|NZ_QZDG01000017\|PILER-CR,CRISPRCasFinder,CRT	63939-63970	32	KY271398	Klebsiella phage 4 LV-2017, complete genome	23100-23131	8	0.75
NZ_QZDG01000017_1	1.2\|63939\|32\|NZ_QZDG01000017\|PILER-CR,CRISPRCasFinder,CRT	63939-63970	32	CP025900	Escherichia phage sp., complete genome	17590-17621	8	0.75
NZ_QZDG01000017_2	2.10\|71273\|32\|NZ_QZDG01000017\|CRISPRCasFinder,CRT,PILER-CR	71273-71304	32	NZ_CP042265	Litoreibacter sp. LN3S51 plasmid unnamed4, complete sequence	43817-43848	8	0.75
NZ_QZDG01000017_2	2.12\|71393\|32\|NZ_QZDG01000017\|CRISPRCasFinder,CRT,PILER-CR	71393-71424	32	NZ_CP049914	Vibrio sp. HDW18 plasmid p_unnamed1, complete sequence	129010-129041	8	0.75
NZ_QZDG01000017_2	2.12\|71393\|32\|NZ_QZDG01000017\|CRISPRCasFinder,CRT,PILER-CR	71393-71424	32	MT104465	Pseudomonas phage MR1, complete genome	31831-31862	8	0.75
NZ_QZDG01000017_1	1.2\|63939\|32\|NZ_QZDG01000017\|PILER-CR,CRISPRCasFinder,CRT	63939-63970	32	NZ_CP012748	Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence	410680-410711	9	0.719
NZ_QZDG01000017_1	1.2\|63939\|32\|NZ_QZDG01000017\|PILER-CR,CRISPRCasFinder,CRT	63939-63970	32	NZ_AP014580	Burkholderia sp. RPE67 plasmid p2, complete sequence	263322-263353	9	0.719
NZ_QZDG01000017_1	1.2\|63939\|32\|NZ_QZDG01000017\|PILER-CR,CRISPRCasFinder,CRT	63939-63970	32	NC_016626	Burkholderia sp. YI23 plasmid byi_1p, complete sequence	1691645-1691676	9	0.719
NZ_QZDG01000017_1	1.5\|64119\|32\|NZ_QZDG01000017\|PILER-CR,CRISPRCasFinder,CRT	64119-64150	32	NZ_CP049911	Diaphorobacter sp. HDW4A plasmid p_unnamed1, complete sequence	240045-240076	9	0.719
NZ_QZDG01000017_1	1.5\|64119\|32\|NZ_QZDG01000017\|PILER-CR,CRISPRCasFinder,CRT	64119-64150	32	NZ_CP020927	Sphingobium yanoikuyae strain SHJ plasmid pSES189, complete sequence	23596-23627	9	0.719
NZ_QZDG01000017_1	1.5\|64119\|32\|NZ_QZDG01000017\|PILER-CR,CRISPRCasFinder,CRT	64119-64150	32	NC_008043	Ruegeria sp. TM1040 megaplasmid, complete sequence	151059-151090	9	0.719
NZ_QZDG01000017_1	1.5\|64119\|32\|NZ_QZDG01000017\|PILER-CR,CRISPRCasFinder,CRT	64119-64150	32	NZ_CP046256	Sphingobium sp. CAP-1 plasmid p3, complete sequence	25803-25834	9	0.719
NZ_QZDG01000017_1	1.5\|64119\|32\|NZ_QZDG01000017\|PILER-CR,CRISPRCasFinder,CRT	64119-64150	32	NZ_CP053227	Sphingobium sp. RSMS plasmid pRSMS4	8278-8309	9	0.719
NZ_QZDG01000017_1	1.5\|64119\|32\|NZ_QZDG01000017\|PILER-CR,CRISPRCasFinder,CRT	64119-64150	32	NZ_CP023072	Sinorhizobium fredii CCBAU 83666 plasmid pSF83666a, complete sequence	209206-209237	9	0.719
NZ_QZDG01000017_1	1.5\|64119\|32\|NZ_QZDG01000017\|PILER-CR,CRISPRCasFinder,CRT	64119-64150	32	NZ_CP022748	Sphingobium hydrophobicum strain C1 plasmid p2, complete sequence	241613-241644	9	0.719
NZ_QZDG01000017_1	1.5\|64119\|32\|NZ_QZDG01000017\|PILER-CR,CRISPRCasFinder,CRT	64119-64150	32	NC_009507	Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence	21204-21235	9	0.719
NZ_QZDG01000017_1	1.5\|64119\|32\|NZ_QZDG01000017\|PILER-CR,CRISPRCasFinder,CRT	64119-64150	32	MN855885	Siphoviridae sp. isolate 38, complete genome	1544-1575	9	0.719
NZ_QZDG01000017_2	2.7\|71092\|33\|NZ_QZDG01000017\|CRISPRCasFinder,CRT,PILER-CR	71092-71124	33	MH717709	Escherichia phage LL2, complete genome	11181-11213	9	0.727
NZ_QZDG01000017_2	2.12\|71393\|32\|NZ_QZDG01000017\|CRISPRCasFinder,CRT,PILER-CR	71393-71424	32	KU064779	Pseudomonas phage PPPL-1, complete genome	33988-34019	9	0.719
NZ_QZDG01000017_2	2.17\|71693\|32\|NZ_QZDG01000017\|CRISPRCasFinder,CRT,PILER-CR	71693-71724	32	NZ_CP023068	Ensifer sojae CCBAU 05684 plasmid pSJ05684b, complete sequence	264774-264805	9	0.719
NZ_QZDG01000017_2	2.17\|71693\|32\|NZ_QZDG01000017\|CRISPRCasFinder,CRT,PILER-CR	71693-71724	32	NZ_CP017944	Phyllobacterium zundukense strain Tri-48 plasmid unnamed4, complete sequence	264591-264622	9	0.719
NZ_QZDG01000017_3	3.3\|80847\|32\|NZ_QZDG01000017\|CRISPRCasFinder,CRT	80847-80878	32	NZ_CP047096	Bacillus marisflavi strain 151-25 plasmid p25, complete sequence	20202-20233	9	0.719
NZ_QZDG01000017_3	3.10\|81267\|32\|NZ_QZDG01000017\|CRISPRCasFinder,CRT	81267-81298	32	MK937601	Gordonia phage Charming, complete genome	1379-1410	9	0.719
NZ_QZDG01000017_3	3.10\|81267\|32\|NZ_QZDG01000017\|CRISPRCasFinder,CRT	81267-81298	32	MH976519	Gordonia phage Tangent, complete genome	1379-1410	9	0.719
NZ_QZDG01000017_3	3.10\|81267\|32\|NZ_QZDG01000017\|CRISPRCasFinder,CRT	81267-81298	32	MH976510	Gordonia phage Fosterous, complete genome	1379-1410	9	0.719
NZ_QZDG01000017_3	3.10\|81267\|32\|NZ_QZDG01000017\|CRISPRCasFinder,CRT	81267-81298	32	MH479924	Gordonia phage Rofo, complete genome	1379-1410	9	0.719
NZ_QZDG01000017_3	3.10\|81267\|32\|NZ_QZDG01000017\|CRISPRCasFinder,CRT	81267-81298	32	MH976514	Gordonia phage Nordenberg, complete genome	1379-1410	9	0.719
NZ_QZDG01000017_3	3.10\|81267\|32\|NZ_QZDG01000017\|CRISPRCasFinder,CRT	81267-81298	32	NC_031239	Gordonia phage Vivi2, complete genome	1379-1410	9	0.719
NZ_QZDG01000017_1	1.2\|63939\|32\|NZ_QZDG01000017\|PILER-CR,CRISPRCasFinder,CRT	63939-63970	32	NZ_CP013104	Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence	116424-116455	10	0.688
NZ_QZDG01000017_1	1.7\|64239\|32\|NZ_QZDG01000017\|PILER-CR,CRISPRCasFinder,CRT	64239-64270	32	NZ_CP025802	Yersinia ruckeri strain SC09 plasmid pLT, complete sequence	11979-12010	10	0.688
NZ_QZDG01000017_2	2.12\|71393\|32\|NZ_QZDG01000017\|CRISPRCasFinder,CRT,PILER-CR	71393-71424	32	NZ_CP046163	Vibrio sp. THAF191c plasmid pTHAF191c_b, complete sequence	143577-143608	10	0.688
NZ_QZDG01000017_2	2.12\|71393\|32\|NZ_QZDG01000017\|CRISPRCasFinder,CRT,PILER-CR	71393-71424	32	NZ_CP046066	Vibrio sp. THAF191d plasmid pTHAF191d_b, complete sequence	327867-327898	10	0.688
NZ_QZDG01000017_2	2.12\|71393\|32\|NZ_QZDG01000017\|CRISPRCasFinder,CRT,PILER-CR	71393-71424	32	NZ_CP045356	Vibrio sp. THAF64 plasmid pTHAF64_a, complete sequence	1432941-1432972	10	0.688
NZ_QZDG01000017_3	3.1\|80727\|32\|NZ_QZDG01000017\|CRISPRCasFinder,CRT	80727-80758	32	NZ_CP019037	Massilia putida strain 6NM-7 plasmid unnamed2, complete sequence	379715-379746	10	0.688
NZ_QZDG01000017_3	3.4\|80907\|32\|NZ_QZDG01000017\|CRISPRCasFinder,CRT,PILER-CR	80907-80938	32	NZ_CP029209	Nitratireductor sp. OM-1 plasmid pOM-1, complete sequence	640384-640415	10	0.688
NZ_QZDG01000017_3	3.9\|81207\|32\|NZ_QZDG01000017\|CRISPRCasFinder,CRT	81207-81238	32	MK448349	Streptococcus satellite phage Javan176, complete genome	1781-1812	10	0.688
NZ_QZDG01000017_1	1.2\|63939\|32\|NZ_QZDG01000017\|PILER-CR,CRISPRCasFinder,CRT	63939-63970	32	NC_012855	Ralstonia pickettii 12D plasmid pRp12D01, complete sequence	106164-106195	11	0.656
NZ_QZDG01000017_2	2.6\|71032\|32\|NZ_QZDG01000017\|CRISPRCasFinder,CRT,PILER-CR	71032-71063	32	NZ_CP053711	Acetobacteraceae bacterium strain PAMC 26569 plasmid unnamed4, complete sequence	74002-74033	11	0.656
NZ_QZDG01000017_2	2.16\|71633\|32\|NZ_QZDG01000017\|CRISPRCasFinder,CRT,PILER-CR	71633-71664	32	NZ_CP045721	Pantoea eucalypti strain LMG 24197 plasmid unnamed1, complete sequence	39719-39750	11	0.656
NZ_QZDG01000017_2	2.16\|71633\|32\|NZ_QZDG01000017\|CRISPRCasFinder,CRT,PILER-CR	71633-71664	32	NZ_CP022517	Pantoea vagans strain FBS135 plasmid pPant1, complete sequence	364142-364173	11	0.656

1. spacer 1.2|63939|32|NZ_QZDG01000017|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP035512 (Haematobacter massiliensis strain OT1 plasmid pOT1-2, complete sequence) position: , mismatch: 6, identity: 0.812

cgacacatccgccacacgcccgtcggcgctgc	CRISPR spacer
cgaactatccgccacccgcctgtcggcgctga	Protospacer
***  .********* ****.**********

2. spacer 1.2|63939|32|NZ_QZDG01000017|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053206 (Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1D, complete sequence) position: , mismatch: 6, identity: 0.812

cgaca-catccgccacacgcccgtcggcgctgc	CRISPR spacer
-gacagcgaccgccacaagcccgtcggcgttgg	Protospacer
 **** *. ******** ***********.**

3. spacer 1.3|63999|32|NZ_QZDG01000017|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029096 (Pseudomonas aeruginosa strain AR439 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.781

acacgctgtgcgcgttgattgcgcagcactgg	CRISPR spacer
tcacgctgggcgcgttgactgcgcagttgcgg	Protospacer
 ******* *********.*******.  .**

4. spacer 1.3|63999|32|NZ_QZDG01000017|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029096 (Pseudomonas aeruginosa strain AR439 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.781

acacgctgtgcgcgttgattgcgcagcactgg	CRISPR spacer
tcacgctgggcgcgttgactgcgcagttgcgg	Protospacer
 ******* *********.*******.  .**

5. spacer 1.3|63999|32|NZ_QZDG01000017|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029096 (Pseudomonas aeruginosa strain AR439 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.781

acacgctgtgcgcgttgattgcgcagcactgg	CRISPR spacer
tcacgctgggcgcgttgactgcgcagttgcgg	Protospacer
 ******* *********.*******.  .**

6. spacer 1.3|63999|32|NZ_QZDG01000017|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029096 (Pseudomonas aeruginosa strain AR439 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.781

acacgctgtgcgcgttgattgcgcagcactgg	CRISPR spacer
tcacgctgggcgcgttgactgcgcagttgcgg	Protospacer
 ******* *********.*******.  .**

7. spacer 1.3|63999|32|NZ_QZDG01000017|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029096 (Pseudomonas aeruginosa strain AR439 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.781

acacgctgtgcgcgttgattgcgcagcactgg	CRISPR spacer
tcacgctgggcgcgttgactgcgcagttgcgg	Protospacer
 ******* *********.*******.  .**

8. spacer 1.3|63999|32|NZ_QZDG01000017|PILER-CR,CRISPRCasFinder,CRT matches to MT011984 (Comamonas testosteroni strain NFYY023 plasmid pNFYY023-1, complete sequence) position: , mismatch: 7, identity: 0.781

acacgctgtgcgcgttgattgcgcagcactgg	CRISPR spacer
tcacgctgggcgcgttgactgcgcagttgcgg	Protospacer
 ******* *********.*******.  .**

9. spacer 1.1|63879|32|NZ_QZDG01000017|PILER-CR,CRISPRCasFinder,CRT matches to NC_021289 (Burkholderia insecticola plasmid p1, complete sequence) position: , mismatch: 8, identity: 0.75

tggtgccgccatgttttgagcggaccataccg	CRISPR spacer
tgcggccgccctgttttgcgcggaccatcggc	Protospacer
**  ****** ******* *********

10. spacer 1.2|63939|32|NZ_QZDG01000017|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019257 (Escherichia coli strain 13TMH22 plasmid p13TMH22-1, complete sequence) position: , mismatch: 8, identity: 0.75

cgacacatccgccacacgcccgtcggcgctgc	CRISPR spacer
actggcatccgccacccgaccgtcggcgcttc	Protospacer
    .********** ** *********** *

11. spacer 1.2|63939|32|NZ_QZDG01000017|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019274 (Escherichia coli strain 13P477T plasmid p13P477T-1, complete sequence) position: , mismatch: 8, identity: 0.75

cgacacatccgccacacgcccgtcggcgctgc	CRISPR spacer
actggcatccgccacccgaccgtcggcgcttc	Protospacer
    .********** ** *********** *

12. spacer 1.2|63939|32|NZ_QZDG01000017|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019275 (Escherichia coli strain 13P477T plasmid p13P477T-2, complete sequence) position: , mismatch: 8, identity: 0.75

cgacacatccgccacacgcccgtcggcgctgc	CRISPR spacer
actggcatccgccacccgaccgtcggcgcttc	Protospacer
    .********** ** *********** *

13. spacer 1.2|63939|32|NZ_QZDG01000017|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019279 (Escherichia coli strain 13P477T plasmid p13P477T-6, complete sequence) position: , mismatch: 8, identity: 0.75

cgacacatccgccacacgcccgtcggcgctgc	CRISPR spacer
actggcatccgccacccgaccgtcggcgcttc	Protospacer
    .********** ** *********** *

14. spacer 1.2|63939|32|NZ_QZDG01000017|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019246 (Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence) position: , mismatch: 8, identity: 0.75

cgacacatccgccacacgcccgtcggcgctgc	CRISPR spacer
actggcatccgccacccgaccgtcggcgcttc	Protospacer
    .********** ** *********** *

15. spacer 1.2|63939|32|NZ_QZDG01000017|PILER-CR,CRISPRCasFinder,CRT matches to NC_049342 (Escherichia phage 500465-1, complete genome) position: , mismatch: 8, identity: 0.75

cgacacatccgccacacgcccgtcggcgctgc	CRISPR spacer
actggcatccgccacccgaccgtcggcgcttc	Protospacer
    .********** ** *********** *

16. spacer 1.2|63939|32|NZ_QZDG01000017|PILER-CR,CRISPRCasFinder,CRT matches to KY271398 (Klebsiella phage 4 LV-2017, complete genome) position: , mismatch: 8, identity: 0.75

cgacacatccgccacacgcccgtcggcgctgc	CRISPR spacer
actggcatccgccacccgaccgtcggcgcttc	Protospacer
    .********** ** *********** *

17. spacer 1.2|63939|32|NZ_QZDG01000017|PILER-CR,CRISPRCasFinder,CRT matches to CP025900 (Escherichia phage sp., complete genome) position: , mismatch: 8, identity: 0.75

cgacacatccgccacacgcccgtcggcgctgc	CRISPR spacer
actggcatccgccacccgaccgtcggcgcttc	Protospacer
    .********** ** *********** *

18. spacer 2.10|71273|32|NZ_QZDG01000017|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP042265 (Litoreibacter sp. LN3S51 plasmid unnamed4, complete sequence) position: , mismatch: 8, identity: 0.75

agtatcagccagacgaaaaccgactttttcac	CRISPR spacer
cgcaccgttcagacgcaaacccactttttcac	Protospacer
 *.*.*. .****** ***** **********

19. spacer 2.12|71393|32|NZ_QZDG01000017|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP049914 (Vibrio sp. HDW18 plasmid p_unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ccataccttcaacctcagtgaagtatttctca	CRISPR spacer
tttttgcttcaagctcagtgaagtatttcacg	Protospacer
.. *  ****** **************** *.

20. spacer 2.12|71393|32|NZ_QZDG01000017|CRISPRCasFinder,CRT,PILER-CR matches to MT104465 (Pseudomonas phage MR1, complete genome) position: , mismatch: 8, identity: 0.75

ccataccttcaacctcagtgaagtatttctca	CRISPR spacer
ccataccggcaacctcagtgaagttctgagcg	Protospacer
*******  *************** .*   *.

21. spacer 1.2|63939|32|NZ_QZDG01000017|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

cgacacatccgccacacgcccgtcggcgctgc	CRISPR spacer
gcagagatccgccgcacggccgtcggcgcatt	Protospacer
  * * *******.**** **********  .

22. spacer 1.2|63939|32|NZ_QZDG01000017|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP014580 (Burkholderia sp. RPE67 plasmid p2, complete sequence) position: , mismatch: 9, identity: 0.719

cgacacatccgccacacgcccgtcggcgctgc	CRISPR spacer
atcgacggccgccacacgccagacggcgctgg	Protospacer
    **. ************ * ********

23. spacer 1.2|63939|32|NZ_QZDG01000017|PILER-CR,CRISPRCasFinder,CRT matches to NC_016626 (Burkholderia sp. YI23 plasmid byi_1p, complete sequence) position: , mismatch: 9, identity: 0.719

cgacacatccgccacacgcccgtcggcgctgc	CRISPR spacer
atcgacggccgccacacgccagacggcgctgg	Protospacer
    **. ************ * ********

24. spacer 1.5|64119|32|NZ_QZDG01000017|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049911 (Diaphorobacter sp. HDW4A plasmid p_unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

ctaccgcgcccttgaaacgctgcgtcgtattc	CRISPR spacer
aaaagaacccctttaaacgttgcgtcgtattc	Protospacer
  *  .  ***** *****.************

25. spacer 1.5|64119|32|NZ_QZDG01000017|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020927 (Sphingobium yanoikuyae strain SHJ plasmid pSES189, complete sequence) position: , mismatch: 9, identity: 0.719

ctaccgcgcccttgaaacgctgcgtcgtattc	CRISPR spacer
agtccgcgcccttgaaccgcagcgtcctgtcg	Protospacer
   ************* *** ***** *.*.

26. spacer 1.5|64119|32|NZ_QZDG01000017|PILER-CR,CRISPRCasFinder,CRT matches to NC_008043 (Ruegeria sp. TM1040 megaplasmid, complete sequence) position: , mismatch: 9, identity: 0.719

ctaccgcgcccttgaaacgctgcgtcgtattc	CRISPR spacer
ttaccgcgtccttgaaacggtgcgataaaacc	Protospacer
.*******.********** **** .. * .*

27. spacer 1.5|64119|32|NZ_QZDG01000017|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046256 (Sphingobium sp. CAP-1 plasmid p3, complete sequence) position: , mismatch: 9, identity: 0.719

ctaccgcgcccttgaaacgctgcgtcgtattc	CRISPR spacer
agtccgcgcccttgaaccgcagcgtcctgtcg	Protospacer
   ************* *** ***** *.*.

28. spacer 1.5|64119|32|NZ_QZDG01000017|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053227 (Sphingobium sp. RSMS plasmid pRSMS4) position: , mismatch: 9, identity: 0.719

ctaccgcgcccttgaaacgctgcgtcgtattc	CRISPR spacer
agtccgcgcccttgaaccgcagcgtcctgtcg	Protospacer
   ************* *** ***** *.*.

29. spacer 1.5|64119|32|NZ_QZDG01000017|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023072 (Sinorhizobium fredii CCBAU 83666 plasmid pSF83666a, complete sequence) position: , mismatch: 9, identity: 0.719

ctaccgcgcccttgaaacgctgcgtcgtattc	CRISPR spacer
ttaccgcggccctgaaacgctgcgggatcgcc	Protospacer
.******* **.************  .*  .*

30. spacer 1.5|64119|32|NZ_QZDG01000017|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022748 (Sphingobium hydrophobicum strain C1 plasmid p2, complete sequence) position: , mismatch: 9, identity: 0.719

ctaccgcgcccttgaaacgctgcgtcgtattc	CRISPR spacer
agtccgcgcccttgaaccgcagcgtcctgtcg	Protospacer
   ************* *** ***** *.*.

31. spacer 1.5|64119|32|NZ_QZDG01000017|PILER-CR,CRISPRCasFinder,CRT matches to NC_009507 (Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence) position: , mismatch: 9, identity: 0.719

ctaccgcgcccttgaaacgctgcgtcgtattc	CRISPR spacer
agtccgcgcccttgaaccgcagcgtcctgtcg	Protospacer
   ************* *** ***** *.*.

32. spacer 1.5|64119|32|NZ_QZDG01000017|PILER-CR,CRISPRCasFinder,CRT matches to MN855885 (Siphoviridae sp. isolate 38, complete genome) position: , mismatch: 9, identity: 0.719

ctaccgcgcccttgaaacgctgcgtcgtattc	CRISPR spacer
aaatatcagccttgaaactctacgtcgtattc	Protospacer
  *.  *. ********* **.**********

33. spacer 2.7|71092|33|NZ_QZDG01000017|CRISPRCasFinder,CRT,PILER-CR matches to MH717709 (Escherichia phage LL2, complete genome) position: , mismatch: 9, identity: 0.727

atccgttttttcaagttgaatgctggccaggct	CRISPR spacer
caccagcgcttcaagttgaatgatgggcaggct	Protospacer
  **. . .************* *** ******

34. spacer 2.12|71393|32|NZ_QZDG01000017|CRISPRCasFinder,CRT,PILER-CR matches to KU064779 (Pseudomonas phage PPPL-1, complete genome) position: , mismatch: 9, identity: 0.719

ccataccttcaacctcagtgaagtatttctca	CRISPR spacer
tcataccggcaacctcagtgaagttctgagcg	Protospacer
.******  *************** .*   *.

35. spacer 2.17|71693|32|NZ_QZDG01000017|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023068 (Ensifer sojae CCBAU 05684 plasmid pSJ05684b, complete sequence) position: , mismatch: 9, identity: 0.719

tttcgagtgcgtgccgcaacccgtcaggcaag	CRISPR spacer
cgtcgagtgcgtgccgcagcctgtcatgatcc	Protospacer
. ****************.**.**** *

36. spacer 2.17|71693|32|NZ_QZDG01000017|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017944 (Phyllobacterium zundukense strain Tri-48 plasmid unnamed4, complete sequence) position: , mismatch: 9, identity: 0.719

tttcgagtgcgtgccgcaacccgtcaggcaag	CRISPR spacer
ggtcgagtgcgtcgcgcaacccgtcgccgatg	Protospacer
  **********  ***********.   * *

37. spacer 3.3|80847|32|NZ_QZDG01000017|CRISPRCasFinder,CRT matches to NZ_CP047096 (Bacillus marisflavi strain 151-25 plasmid p25, complete sequence) position: , mismatch: 9, identity: 0.719

cgccgcgaaatgtcaccaacataaaccataac	CRISPR spacer
ccactgaaaatgtcaccaatataaaacatata	Protospacer
*  *  .************.***** ****

38. spacer 3.10|81267|32|NZ_QZDG01000017|CRISPRCasFinder,CRT matches to MK937601 (Gordonia phage Charming, complete genome) position: , mismatch: 9, identity: 0.719

agggcgcgtgggtgcgactggaagataaagag	CRISPR spacer
agggcgtatgggtgcgactggaatcactaagg	Protospacer
******..***************     *..*

39. spacer 3.10|81267|32|NZ_QZDG01000017|CRISPRCasFinder,CRT matches to MH976519 (Gordonia phage Tangent, complete genome) position: , mismatch: 9, identity: 0.719

agggcgcgtgggtgcgactggaagataaagag	CRISPR spacer
agggcgtatgggtgcgactggaatcactaagg	Protospacer
******..***************     *..*

40. spacer 3.10|81267|32|NZ_QZDG01000017|CRISPRCasFinder,CRT matches to MH976510 (Gordonia phage Fosterous, complete genome) position: , mismatch: 9, identity: 0.719

agggcgcgtgggtgcgactggaagataaagag	CRISPR spacer
agggcgtatgggtgcgactggaatcactaagg	Protospacer
******..***************     *..*

41. spacer 3.10|81267|32|NZ_QZDG01000017|CRISPRCasFinder,CRT matches to MH479924 (Gordonia phage Rofo, complete genome) position: , mismatch: 9, identity: 0.719

agggcgcgtgggtgcgactggaagataaagag	CRISPR spacer
agggcgtatgggtgcgactggaatcactaagg	Protospacer
******..***************     *..*

42. spacer 3.10|81267|32|NZ_QZDG01000017|CRISPRCasFinder,CRT matches to MH976514 (Gordonia phage Nordenberg, complete genome) position: , mismatch: 9, identity: 0.719

agggcgcgtgggtgcgactggaagataaagag	CRISPR spacer
agggcgtatgggtgcgactggaatcactaagg	Protospacer
******..***************     *..*

43. spacer 3.10|81267|32|NZ_QZDG01000017|CRISPRCasFinder,CRT matches to NC_031239 (Gordonia phage Vivi2, complete genome) position: , mismatch: 9, identity: 0.719

agggcgcgtgggtgcgactggaagataaagag	CRISPR spacer
agggcgtatgggtgcgactggaatcactaagg	Protospacer
******..***************     *..*

44. spacer 1.2|63939|32|NZ_QZDG01000017|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013104 (Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacacatccgccacacgcccgtcggcgctgc	CRISPR spacer
gcggagatccgccgcacggccgtcggcgcatt	Protospacer
  . * *******.**** **********  .

45. spacer 1.7|64239|32|NZ_QZDG01000017|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025802 (Yersinia ruckeri strain SC09 plasmid pLT, complete sequence) position: , mismatch: 10, identity: 0.688

tgaactagtaatggcgacaaaacagatagtct	CRISPR spacer
gaaactatttatggcgacaaaacagcacgcta	Protospacer
 .***** * ***************   *..

46. spacer 2.12|71393|32|NZ_QZDG01000017|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP046163 (Vibrio sp. THAF191c plasmid pTHAF191c_b, complete sequence) position: , mismatch: 10, identity: 0.688

ccataccttcaacctcagtgaagtatttctca	CRISPR spacer
tttctgcttcaagctctgtgaagtatttcact	Protospacer
.. .  ****** *** ************ *

47. spacer 2.12|71393|32|NZ_QZDG01000017|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP046066 (Vibrio sp. THAF191d plasmid pTHAF191d_b, complete sequence) position: , mismatch: 10, identity: 0.688

ccataccttcaacctcagtgaagtatttctca	CRISPR spacer
tttctgcttcaagctctgtgaagtatttcact	Protospacer
.. .  ****** *** ************ *

48. spacer 2.12|71393|32|NZ_QZDG01000017|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP045356 (Vibrio sp. THAF64 plasmid pTHAF64_a, complete sequence) position: , mismatch: 10, identity: 0.688

ccataccttcaacctcagtgaagtatttctca	CRISPR spacer
tttctgcttcaagctctgtgaagtatttcact	Protospacer
.. .  ****** *** ************ *

49. spacer 3.1|80727|32|NZ_QZDG01000017|CRISPRCasFinder,CRT matches to NZ_CP019037 (Massilia putida strain 6NM-7 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.688

cggcgctgaaagcctataaaggacgccagagc	CRISPR spacer
gattgctgaaagcccatcaaggacgccaagcg	Protospacer
 . .**********.** **********..

50. spacer 3.4|80907|32|NZ_QZDG01000017|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029209 (Nitratireductor sp. OM-1 plasmid pOM-1, complete sequence) position: , mismatch: 10, identity: 0.688

aatggaaaattgctgcgatgtcggccatcacc	CRISPR spacer
tgatccagcttgcggcgatgttggccatcacc	Protospacer
 .    *. **** *******.**********

51. spacer 3.9|81207|32|NZ_QZDG01000017|CRISPRCasFinder,CRT matches to MK448349 (Streptococcus satellite phage Javan176, complete genome) position: , mismatch: 10, identity: 0.688

cgtggggtgccactttgtttgatgctccagac	CRISPR spacer
aatatattgccactttttttgatgttccagtt	Protospacer
 .*. . ********* *******.***** .

52. spacer 1.2|63939|32|NZ_QZDG01000017|PILER-CR,CRISPRCasFinder,CRT matches to NC_012855 (Ralstonia pickettii 12D plasmid pRp12D01, complete sequence) position: , mismatch: 11, identity: 0.656

cgacacatccgccacacgcccgtcggcgctgc	CRISPR spacer
gatggcatccaccacacgcccatcggcgtgct	Protospacer
 .  .*****.**********.******.  .

53. spacer 2.6|71032|32|NZ_QZDG01000017|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP053711 (Acetobacteraceae bacterium strain PAMC 26569 plasmid unnamed4, complete sequence) position: , mismatch: 11, identity: 0.656

gtaaagttggcatcggcgacgtatttattcca	CRISPR spacer
acctggttggcatcggcgacgtgttcatcgtt	Protospacer
..  .*****************.**.**. .

54. spacer 2.16|71633|32|NZ_QZDG01000017|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP045721 (Pantoea eucalypti strain LMG 24197 plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.656

cgggtatgtttgccagtctgtttgcagcagac	CRISPR spacer
ttacgctgtttgccggtctgattgcagcatgg	Protospacer
. .   ********.***** ******** .

55. spacer 2.16|71633|32|NZ_QZDG01000017|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022517 (Pantoea vagans strain FBS135 plasmid pPant1, complete sequence) position: , mismatch: 11, identity: 0.656

cgggtatgtttgccagtctgtttgcagcagac	CRISPR spacer
ttacgctgtttgccggtctgattgcagcatgg	Protospacer
. .   ********.***** ******** .

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

6. NZ_QZDG01000036

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

51237 : 57792

Brazilian_cedratvirus(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_095699839.1\|51237_52035_+	heme ABC transporter ATP-binding protein	A0A2R8FG22	Brazilian_cedratvirus	3.9e-13	28.0
WP_119872217.1\|52054_53506_-	YdiU family protein	A0A075BSJ0	Microcystis_phage	9.8e-55	38.0
WP_119872216.1\|53682_54699_-	lipoate--protein ligase A	NA	NA	NA	NA
WP_039468079.1\|54738_55212_-	endopeptidase	A0A2H5BM69	Streptomyces_phage	3.3e-12	38.6
WP_119872215.1\|55359_56136_-	vitamin B12 ABC transporter ATP-binding protein BtuD	A0A285PWH2	Cedratvirus	1.8e-07	29.5
WP_039285999.1\|56136_56688_-	glutathione peroxidase	Q6VZR0	Canarypox_virus	1.3e-15	34.3
WP_119872214.1\|56754_57792_-	vitamin B12 ABC transporter permease BtuC	A0A2H4IY97	uncultured_Caudovirales_phage	4.7e-11	23.9

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

7. NZ_QZDG01000027

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

44624 : 52436

Mycobacterium_phage(28.57%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_119872185.1\|44624_45488_+	polyamine aminopropyltransferase	A0A1C9C533	Heterosigma_akashiwo_virus	2.5e-18	32.7
WP_014916293.1\|45532_46327_+	adenosylmethionine decarboxylase	NA	NA	NA	NA
WP_014916295.1\|47018_47258_+	glutaredoxin-like protein NrdH	V5UN81	Mycobacterium_phage	9.1e-19	59.5
WP_010280810.1\|47267_47675_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	S5MA49	Bacillus_phage	1.0e-09	35.5
WP_051902877.1\|47671_49819_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	V9VI16	Lactococcus_phage	2.9e-204	51.2
WP_014916297.1\|49843_50806_+	class 1b ribonucleoside-diphosphate reductase subunit beta	R4TBI6	Mycobacterium_phage	3.0e-137	73.6
WP_010280817.1\|51178_51916_-	DNA polymerase III subunit epsilon	A0A1X9SH08	Bradyrhizobium_phage	8.5e-39	38.4
WP_039280691.1\|51971_52436_+	ribonuclease HI	J9Q745	Salmonella_phage	3.7e-48	56.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

8. NZ_QZDG01000047

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

62361 : 69734

Mycoplasma_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_119870740.1\|62361_63669_-	aminopeptidase PepB	Q6GYZ8	Mycoplasma_phage	2.7e-35	37.2
WP_010280073.1\|63883_64084_-	Fe-S cluster assembly protein IscX	NA	NA	NA	NA
WP_005970171.1\|64105_64441_-	ISC system 2Fe-2S type ferredoxin	NA	NA	NA	NA
WP_119870741.1\|64442_66293_-	Fe-S protein assembly chaperone HscA	A0A0N9QXN8	Chrysochromulina_ericina_virus	2.5e-103	41.7
WP_119870742.1\|66368_66887_-	co-chaperone HscB	NA	NA	NA	NA
WP_014916217.1\|66958_67282_-	iron-sulfur cluster assembly protein IscA	A0A2H4N7N5	Lake_Baikal_phage	2.7e-21	46.7
WP_005970177.1\|67362_67749_-	Fe-S cluster assembly scaffold IscU	A0A218MKD1	uncultured_virus	2.4e-53	77.3
WP_119870743.1\|67773_68988_-	IscS subfamily cysteine desulfurase	H7BUW1	unidentified_phage	7.4e-32	36.9
WP_010280087.1\|69239_69734_-	Fe-S cluster assembly transcriptional regulator IscR	M4M9K8	Vibrio_phage	4.1e-05	28.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage