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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP054042 Listeria monocytogenes strain PNUSAL000009 chromosome 4 crisprs WYL,csa3,csn2,cas2,cas1,cas9,DinG,cas3,casR,DEDDh 2 14 9 2

Results visualization

1. NZ_CP054042
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP054042_1 259479-259640 Orphan NA
1 spacers
WYL

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP054042_2 499856-500816 TypeII II-A,II-B
14 spacers
csn2,cas2,cas1,cas9

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP054042_3 972527-972678 Unclear NA
1 spacers
cas3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP054042_4 1303241-1303527 Orphan I-A
4 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_CP054042_2 2.5|500156|31|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR 500156-500186 31 NZ_CP054042.1 466018-466048 2 0.935
NZ_CP054042_4 4.4|1303463|36|NZ_CP054042|PILER-CR,CRT 1303463-1303498 36 NZ_CP054042.1 1454553-1454588 2 0.944

1. spacer 2.5|500156|31|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR matches to position: 466018-466048, mismatch: 2, identity: 0.935

tcgaatgtgtaagcttctgagtaacctagca	CRISPR spacer
tcaaacgtgtaagcttctgagtaacctagca	Protospacer
**.**.*************************

2. spacer 4.4|1303463|36|NZ_CP054042|PILER-CR,CRT matches to position: 1454553-1454588, mismatch: 2, identity: 0.944

acaataataggatattttggatttgtctgcgttcct	CRISPR spacer
acgataataggatattttggatttgcctgcgttcct	Protospacer
**.**********************.**********

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP054042_2 2.5|500156|31|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR 500156-500186 31 KJ094022 Listeria phage LP-030-3, complete genome 16313-16343 0 1.0
NZ_CP054042_2 2.6|500223|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR 500223-500252 30 KJ094023 Listeria phage LP-101, complete genome 19426-19455 0 1.0
NZ_CP054042_2 2.13|500685|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR 500685-500714 30 NC_003216 Listeria phage A118, complete genome 6554-6583 0 1.0
NZ_CP054042_2 2.13|500685|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR 500685-500714 30 AJ242593 Bacteriophage A118 complete genome 6554-6583 0 1.0
NZ_CP054042_2 2.13|500685|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR 500685-500714 30 KJ094022 Listeria phage LP-030-3, complete genome 14945-14974 0 1.0
NZ_CP054042_2 2.14|500751|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR 500751-500780 30 MN172529 Listeria phage LP-039, complete genome 60277-60306 0 1.0
NZ_CP054042_2 2.14|500751|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR 500751-500780 30 MT668624 Listeria phage LP-Mix_6.2, complete genome 61623-61652 0 1.0
NZ_CP054042_2 2.14|500751|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR 500751-500780 30 NC_025440 Listeria phage WIL-1, complete genome 105560-105589 0 1.0
NZ_CP054042_2 2.14|500751|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR 500751-500780 30 NC_047872 Listeria phage LMTA-94, complete genome 71109-71138 0 1.0
NZ_CP054042_2 2.14|500751|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR 500751-500780 30 KJ591604 Listeria phage LMTA-148, complete genome 68215-68244 0 1.0
NZ_CP054042_2 2.14|500751|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR 500751-500780 30 KJ591605 Listeria phage LMTA-57, complete genome 81858-81887 0 1.0
NZ_CP054042_2 2.14|500751|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR 500751-500780 30 KJ094033 Listeria phage LP-048, complete genome 62734-62763 0 1.0
NZ_CP054042_2 2.14|500751|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR 500751-500780 30 KJ668715 Listeria phage LMTA-34, partial genome 57972-58001 0 1.0
NZ_CP054042_2 2.14|500751|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR 500751-500780 30 NC_042048 Listeria phage LMTA-34, complete genome 75832-75861 0 1.0
NZ_CP054042_2 2.14|500751|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR 500751-500780 30 NC_041862 Listeria phage LP-064, complete genome 70234-70263 0 1.0
NZ_CP054042_2 2.14|500751|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR 500751-500780 30 JX126918 Listeria phage LP-125, complete genome 70236-70265 0 1.0
NZ_CP054042_2 2.14|500751|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR 500751-500780 30 NC_024360 Listeria phage LMSP-25, complete genome 75832-75861 0 1.0
NZ_CP054042_2 2.5|500156|31|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR 500156-500186 31 KP399678 Listeria phage vB_LmoS_293, complete genome 7920-7950 1 0.968
NZ_CP054042_2 2.14|500751|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR 500751-500780 30 MT438761 Listeria virus P61, complete genome 72024-72053 1 0.967
NZ_CP054042_2 2.14|500751|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR 500751-500780 30 MT178766 Listeria virus P100plus, complete genome 27249-27278 1 0.967
NZ_CP054042_2 2.14|500751|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR 500751-500780 30 DQ003638 Listeria phage A511, complete genome 60814-60843 1 0.967
NZ_CP054042_2 2.14|500751|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR 500751-500780 30 MT178767 Listeria virus P200, complete genome 27249-27278 1 0.967
NZ_CP054042_2 2.14|500751|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR 500751-500780 30 DQ004855 Listeria bacteriophage P100, complete genome 27248-27277 1 0.967
NZ_CP054042_2 2.14|500751|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR 500751-500780 30 MN128594 Listeria phage LP-066, complete genome 61773-61802 1 0.967
NZ_CP054042_2 2.14|500751|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR 500751-500780 30 MK792752 UNVERIFIED: Listera phage vB-LmoM-SH3-3, complete genome 79360-79389 1 0.967
NZ_CP054042_2 2.14|500751|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR 500751-500780 30 KJ094030 Listeria phage LP-083-2, complete genome 66939-66968 1 0.967
NZ_CP054042_2 2.14|500751|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR 500751-500780 30 JQ797329 Listeria phage vB_LmoM_AG20, complete genome 60123-60152 1 0.967
NZ_CP054042_2 2.14|500751|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR 500751-500780 30 KJ535721 Listeria phage List-36, complete genome 68224-68253 1 0.967
NZ_CP054042_2 2.14|500751|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR 500751-500780 30 KJ094031 Listeria phage LP-124, complete genome 29054-29083 1 0.967
NZ_CP054042_4 4.3|1303399|35|NZ_CP054042|PILER-CR,CRT 1303399-1303433 35 NC_021539 Listeria phage LP-030-2, complete genome 18926-18960 1 0.971
NZ_CP054042_4 4.3|1303399|35|NZ_CP054042|PILER-CR,CRT 1303399-1303433 35 KJ094023 Listeria phage LP-101, complete genome 22882-22916 1 0.971
NZ_CP054042_4 4.7|1303399|36|NZ_CP054042|CRISPRCasFinder 1303399-1303434 36 NC_021539 Listeria phage LP-030-2, complete genome 18926-18961 1 0.972
NZ_CP054042_4 4.7|1303399|36|NZ_CP054042|CRISPRCasFinder 1303399-1303434 36 KJ094023 Listeria phage LP-101, complete genome 22882-22917 1 0.972
NZ_CP054042_2 2.2|499958|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR 499958-499987 30 KJ094028 Listeria phage LP-083-1 contig 2, partial genome 18565-18594 2 0.933
NZ_CP054042_2 2.2|499958|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR 499958-499987 30 DQ003641 Listeria phage P35, complete genome 34695-34724 2 0.933
NZ_CP054042_2 2.5|500156|31|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR 500156-500186 31 MH341452 Listeria phage PSU-VKH-LP040, complete genome 7933-7963 2 0.935
NZ_CP054042_2 2.5|500156|31|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR 500156-500186 31 DQ003637 Listeria phage A500, complete genome 7899-7929 2 0.935
NZ_CP054042_2 2.6|500223|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR 500223-500252 30 NC_003216 Listeria phage A118, complete genome 20408-20437 2 0.933
NZ_CP054042_2 2.6|500223|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR 500223-500252 30 AJ242593 Bacteriophage A118 complete genome 20408-20437 2 0.933
NZ_CP054042_2 2.6|500223|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR 500223-500252 30 X85008 Bacteriophage A118 hol118 and ply118 genes 656-685 2 0.933
NZ_CP054042_4 4.1|1303270|37|NZ_CP054042|PILER-CR,CRT 1303270-1303306 37 NC_009812 Listeria phage B025, complete genome 30705-30741 2 0.946
NZ_CP054042_4 4.3|1303399|35|NZ_CP054042|PILER-CR,CRT 1303399-1303433 35 NC_009812 Listeria phage B025, complete genome 23381-23415 2 0.943
NZ_CP054042_4 4.7|1303399|36|NZ_CP054042|CRISPRCasFinder 1303399-1303434 36 NC_009812 Listeria phage B025, complete genome 23381-23416 2 0.944
NZ_CP054042_4 4.5|1303270|38|NZ_CP054042|CRISPRCasFinder 1303270-1303307 38 NC_009812 Listeria phage B025, complete genome 30704-30741 3 0.921
NZ_CP054042_2 2.5|500156|31|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR 500156-500186 31 NC_003216 Listeria phage A118, complete genome 7919-7949 4 0.871
NZ_CP054042_2 2.5|500156|31|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR 500156-500186 31 AJ242593 Bacteriophage A118 complete genome 7919-7949 4 0.871
NZ_CP054042_2 2.13|500685|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR 500685-500714 30 MN693541 Marine virus AFVG_25M436, complete genome 24008-24037 5 0.833
NZ_CP054042_2 2.14|500751|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR 500751-500780 30 MK327943 Escherichia phage vB_EcoM_G53, complete genome 71695-71724 6 0.8
NZ_CP054042_2 2.1|499892|30|NZ_CP054042|CRISPRCasFinder,CRT 499892-499921 30 MK813941 Aeromonas phage 4_L372XY, complete genome 93420-93449 7 0.767
NZ_CP054042_2 2.8|500355|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR 500355-500384 30 NC_041887 Rhodococcus phage Weasels2, complete genome 68085-68114 7 0.767
NZ_CP054042_2 2.9|500421|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR 500421-500450 30 NC_015498 Glaciecola sp. 4H-3-7+YE-5 plasmid pGLAAG01, complete sequence 13562-13591 7 0.767
NZ_CP054042_2 2.11|500553|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR 500553-500582 30 NZ_CP053711 Acetobacteraceae bacterium strain PAMC 26569 plasmid unnamed4, complete sequence 17299-17328 7 0.767
NZ_CP054042_2 2.11|500553|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR 500553-500582 30 NZ_CP053711 Acetobacteraceae bacterium strain PAMC 26569 plasmid unnamed4, complete sequence 69337-69366 7 0.767
NZ_CP054042_2 2.13|500685|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR 500685-500714 30 NZ_CP042479 Citrobacter freundii strain C50 plasmid pC50_001, complete sequence 5535-5564 7 0.767
NZ_CP054042_2 2.6|500223|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR 500223-500252 30 NZ_CP043436 Campylobacter fetus subsp. venerealis NCTC 10354 plasmid p3226, complete sequence 2890-2919 8 0.733
NZ_CP054042_2 2.6|500223|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR 500223-500252 30 NZ_CP016721 Lactococcus lactis subsp. lactis strain UC11 plasmid pUC11B, complete sequence 23276-23305 8 0.733
NZ_CP054042_2 2.6|500223|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR 500223-500252 30 NZ_CP016727 Lactococcus lactis subsp. lactis strain UC08 plasmid pUC08B, complete sequence 23275-23304 8 0.733
NZ_CP054042_2 2.6|500223|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR 500223-500252 30 NZ_CP008809 Campylobacter fetus subsp. fetus 04/554 plasmid pCFF04554, complete sequence 8547-8576 8 0.733
NZ_CP054042_2 2.6|500223|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR 500223-500252 30 NZ_CP008812 Campylobacter fetus subsp. venerealis 97/608 plasmid pCFV97608-2, complete sequence 17700-17729 8 0.733
NZ_CP054042_2 2.6|500223|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR 500223-500252 30 NZ_CP018792 Campylobacter sp. RM8964 plasmid pVIC8964, complete sequence 21826-21855 8 0.733
NZ_CP054042_2 2.6|500223|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR 500223-500252 30 NZ_CP016699 Lactococcus lactis subsp. lactis strain 275 plasmid p275A, complete sequence 55457-55486 8 0.733
NZ_CP054042_2 2.6|500223|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR 500223-500252 30 NZ_CP018794 Campylobacter sp. RM12175 plasmid pVIC12175-1, complete sequence 22093-22122 8 0.733
NZ_CP054042_2 2.6|500223|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR 500223-500252 30 KC699836 Bacillus phage SIOphi, partial genome 2244-2273 8 0.733
NZ_CP054042_2 2.9|500421|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR 500421-500450 30 NZ_CP015799 Borrelia mayonii strain MN14-1539 plasmid cp32-13, complete sequence 7241-7270 8 0.733
NZ_CP054042_2 2.11|500553|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR 500553-500582 30 NC_014120 Paraburkholderia sp. CCGE1002 plasmid pBC201, complete sequence 170278-170307 8 0.733
NZ_CP054042_2 2.12|500619|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR 500619-500648 30 NC_015427 Clostridium botulinum BKT015925 plasmid p4BKT015925, complete sequence 20826-20855 8 0.733
NZ_CP054042_2 2.13|500685|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR 500685-500714 30 NZ_CP041048 Citrobacter sp. CF971 plasmid pBM527-2, complete sequence 49887-49916 8 0.733
NZ_CP054042_2 2.13|500685|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR 500685-500714 30 MN783744 Klebsiella oxytoca plasmid pFDL-VIM, complete sequence 53506-53535 8 0.733
NZ_CP054042_2 2.13|500685|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR 500685-500714 30 NC_012885 Aeromonas hydrophila plasmid pRA1, complete sequence 6505-6534 8 0.733
NZ_CP054042_2 2.13|500685|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR 500685-500714 30 NZ_CP022274 Citrobacter freundii strain 18-1 plasmid pA18-1, complete sequence 53211-53240 8 0.733
NZ_CP054042_2 2.13|500685|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR 500685-500714 30 NZ_CP042536 Citrobacter freundii strain E51 plasmid pE51_002, complete sequence 5535-5564 8 0.733
NZ_CP054042_2 2.13|500685|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR 500685-500714 30 NZ_CP034714 Salmonella enterica subsp. enterica serovar Mikawasima strain RSE15 plasmid pRSE15, complete sequence 5534-5563 8 0.733
NZ_CP054042_2 2.13|500685|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR 500685-500714 30 NZ_CP010360 Enterobacter roggenkampii strain 35734 plasmid p35734-141.404kb, complete sequence 111873-111902 8 0.733
NZ_CP054042_2 2.13|500685|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR 500685-500714 30 NZ_CP012168 Enterobacter hormaechei subsp. steigerwaltii strain 34998 plasmid p34998-239.973kb, complete sequence 228661-228690 8 0.733
NZ_CP054042_2 2.13|500685|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR 500685-500714 30 MN783743 Escherichia coli plasmid pGA_VIM, complete sequence 64763-64792 8 0.733
NZ_CP054042_2 2.13|500685|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR 500685-500714 30 NZ_CP034084 Klebsiella pneumoniae subsp. pneumoniae strain R210-2 plasmid pR210-2-VIM, complete sequence 5538-5567 8 0.733
NZ_CP054042_2 2.13|500685|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR 500685-500714 30 NZ_MH220284 Aeromonas sp. pRIVM0001_VIM-1 plasmid pRIVM0001_VIM-1_171012_B12, complete sequence 5494-5523 8 0.733
NZ_CP054042_2 2.13|500685|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR 500685-500714 30 NZ_MG228427 Kluyvera cryocrescens strain BO64W plasmid pKC-BO-N1-VIM, complete sequence 5538-5567 8 0.733
NZ_CP054042_2 2.13|500685|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR 500685-500714 30 NZ_MG550958 Escherichia coli strain G3216 plasmid pG3216.2, complete sequence 38131-38160 8 0.733
NZ_CP054042_2 2.13|500685|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR 500685-500714 30 NZ_MH325469 Enterobacter hormaechei strain Ec13 plasmid pEc13, complete sequence 5811-5840 8 0.733
NZ_CP054042_2 2.13|500685|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR 500685-500714 30 NZ_MH325468 Enterobacter hormaechei strain Ec09 plasmid pEc09, complete sequence 5811-5840 8 0.733
NZ_CP054042_2 2.13|500685|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR 500685-500714 30 NZ_MH594478 Citrobacter freundii strain AA593 plasmid pIBAC_Incx3_A/C, complete sequence 30452-30481 8 0.733
NZ_CP054042_2 2.13|500685|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR 500685-500714 30 NZ_MH594477 Citrobacter freundii strain AA535 plasmid pIBAC_IncA/C, complete sequence 31209-31238 8 0.733
NZ_CP054042_2 2.13|500685|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR 500685-500714 30 NZ_MG053108 Citrobacter freundii strain 33587 plasmid pCf587, complete sequence 6505-6534 8 0.733
NZ_CP054042_2 2.9|500421|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR 500421-500450 30 JQ680352 Unidentified phage clone 1013_scaffold1713 genomic sequence 5412-5441 9 0.7

1. spacer 2.5|500156|31|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR matches to KJ094022 (Listeria phage LP-030-3, complete genome) position: , mismatch: 0, identity: 1.0

tcgaatgtgtaagcttctgagtaacctagca	CRISPR spacer
tcgaatgtgtaagcttctgagtaacctagca	Protospacer
*******************************

2. spacer 2.6|500223|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR matches to KJ094023 (Listeria phage LP-101, complete genome) position: , mismatch: 0, identity: 1.0

taacctttaaaattaaattgaaggtgcgga	CRISPR spacer
taacctttaaaattaaattgaaggtgcgga	Protospacer
******************************

3. spacer 2.13|500685|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR matches to NC_003216 (Listeria phage A118, complete genome) position: , mismatch: 0, identity: 1.0

tacatcgctaccaatcaatccgctattaag	CRISPR spacer
tacatcgctaccaatcaatccgctattaag	Protospacer
******************************

4. spacer 2.13|500685|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR matches to AJ242593 (Bacteriophage A118 complete genome) position: , mismatch: 0, identity: 1.0

tacatcgctaccaatcaatccgctattaag	CRISPR spacer
tacatcgctaccaatcaatccgctattaag	Protospacer
******************************

5. spacer 2.13|500685|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR matches to KJ094022 (Listeria phage LP-030-3, complete genome) position: , mismatch: 0, identity: 1.0

tacatcgctaccaatcaatccgctattaag	CRISPR spacer
tacatcgctaccaatcaatccgctattaag	Protospacer
******************************

6. spacer 2.14|500751|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR matches to MN172529 (Listeria phage LP-039, complete genome) position: , mismatch: 0, identity: 1.0

atctatattatcatacgtcaaggaagggta	CRISPR spacer
atctatattatcatacgtcaaggaagggta	Protospacer
******************************

7. spacer 2.14|500751|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR matches to MT668624 (Listeria phage LP-Mix_6.2, complete genome) position: , mismatch: 0, identity: 1.0

atctatattatcatacgtcaaggaagggta	CRISPR spacer
atctatattatcatacgtcaaggaagggta	Protospacer
******************************

8. spacer 2.14|500751|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR matches to NC_025440 (Listeria phage WIL-1, complete genome) position: , mismatch: 0, identity: 1.0

atctatattatcatacgtcaaggaagggta	CRISPR spacer
atctatattatcatacgtcaaggaagggta	Protospacer
******************************

9. spacer 2.14|500751|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR matches to NC_047872 (Listeria phage LMTA-94, complete genome) position: , mismatch: 0, identity: 1.0

atctatattatcatacgtcaaggaagggta	CRISPR spacer
atctatattatcatacgtcaaggaagggta	Protospacer
******************************

10. spacer 2.14|500751|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR matches to KJ591604 (Listeria phage LMTA-148, complete genome) position: , mismatch: 0, identity: 1.0

atctatattatcatacgtcaaggaagggta	CRISPR spacer
atctatattatcatacgtcaaggaagggta	Protospacer
******************************

11. spacer 2.14|500751|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR matches to KJ591605 (Listeria phage LMTA-57, complete genome) position: , mismatch: 0, identity: 1.0

atctatattatcatacgtcaaggaagggta	CRISPR spacer
atctatattatcatacgtcaaggaagggta	Protospacer
******************************

12. spacer 2.14|500751|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR matches to KJ094033 (Listeria phage LP-048, complete genome) position: , mismatch: 0, identity: 1.0

atctatattatcatacgtcaaggaagggta	CRISPR spacer
atctatattatcatacgtcaaggaagggta	Protospacer
******************************

13. spacer 2.14|500751|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR matches to KJ668715 (Listeria phage LMTA-34, partial genome) position: , mismatch: 0, identity: 1.0

atctatattatcatacgtcaaggaagggta	CRISPR spacer
atctatattatcatacgtcaaggaagggta	Protospacer
******************************

14. spacer 2.14|500751|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR matches to NC_042048 (Listeria phage LMTA-34, complete genome) position: , mismatch: 0, identity: 1.0

atctatattatcatacgtcaaggaagggta	CRISPR spacer
atctatattatcatacgtcaaggaagggta	Protospacer
******************************

15. spacer 2.14|500751|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR matches to NC_041862 (Listeria phage LP-064, complete genome) position: , mismatch: 0, identity: 1.0

atctatattatcatacgtcaaggaagggta	CRISPR spacer
atctatattatcatacgtcaaggaagggta	Protospacer
******************************

16. spacer 2.14|500751|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR matches to JX126918 (Listeria phage LP-125, complete genome) position: , mismatch: 0, identity: 1.0

atctatattatcatacgtcaaggaagggta	CRISPR spacer
atctatattatcatacgtcaaggaagggta	Protospacer
******************************

17. spacer 2.14|500751|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR matches to NC_024360 (Listeria phage LMSP-25, complete genome) position: , mismatch: 0, identity: 1.0

atctatattatcatacgtcaaggaagggta	CRISPR spacer
atctatattatcatacgtcaaggaagggta	Protospacer
******************************

18. spacer 2.5|500156|31|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR matches to KP399678 (Listeria phage vB_LmoS_293, complete genome) position: , mismatch: 1, identity: 0.968

tcgaatgtgtaagcttctgagtaacctagca	CRISPR spacer
tcgaatgtgtaagcttctgagtaacctagta	Protospacer
*****************************.*

19. spacer 2.14|500751|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR matches to MT438761 (Listeria virus P61, complete genome) position: , mismatch: 1, identity: 0.967

atctatattatcatacgtcaaggaagggta	CRISPR spacer
gtctatattatcatacgtcaaggaagggta	Protospacer
.*****************************

20. spacer 2.14|500751|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR matches to MT178766 (Listeria virus P100plus, complete genome) position: , mismatch: 1, identity: 0.967

atctatattatcatacgtcaaggaagggta	CRISPR spacer
gtctatattatcatacgtcaaggaagggta	Protospacer
.*****************************

21. spacer 2.14|500751|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR matches to DQ003638 (Listeria phage A511, complete genome) position: , mismatch: 1, identity: 0.967

atctatattatcatacgtcaaggaagggta	CRISPR spacer
gtctatattatcatacgtcaaggaagggta	Protospacer
.*****************************

22. spacer 2.14|500751|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR matches to MT178767 (Listeria virus P200, complete genome) position: , mismatch: 1, identity: 0.967

atctatattatcatacgtcaaggaagggta	CRISPR spacer
gtctatattatcatacgtcaaggaagggta	Protospacer
.*****************************

23. spacer 2.14|500751|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR matches to DQ004855 (Listeria bacteriophage P100, complete genome) position: , mismatch: 1, identity: 0.967

atctatattatcatacgtcaaggaagggta	CRISPR spacer
gtctatattatcatacgtcaaggaagggta	Protospacer
.*****************************

24. spacer 2.14|500751|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR matches to MN128594 (Listeria phage LP-066, complete genome) position: , mismatch: 1, identity: 0.967

atctatattatcatacgtcaaggaagggta	CRISPR spacer
gtctatattatcatacgtcaaggaagggta	Protospacer
.*****************************

25. spacer 2.14|500751|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR matches to MK792752 (UNVERIFIED: Listera phage vB-LmoM-SH3-3, complete genome) position: , mismatch: 1, identity: 0.967

atctatattatcatacgtcaaggaagggta	CRISPR spacer
gtctatattatcatacgtcaaggaagggta	Protospacer
.*****************************

26. spacer 2.14|500751|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR matches to KJ094030 (Listeria phage LP-083-2, complete genome) position: , mismatch: 1, identity: 0.967

atctatattatcatacgtcaaggaagggta	CRISPR spacer
gtctatattatcatacgtcaaggaagggta	Protospacer
.*****************************

27. spacer 2.14|500751|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR matches to JQ797329 (Listeria phage vB_LmoM_AG20, complete genome) position: , mismatch: 1, identity: 0.967

atctatattatcatacgtcaaggaagggta	CRISPR spacer
gtctatattatcatacgtcaaggaagggta	Protospacer
.*****************************

28. spacer 2.14|500751|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR matches to KJ535721 (Listeria phage List-36, complete genome) position: , mismatch: 1, identity: 0.967

atctatattatcatacgtcaaggaagggta	CRISPR spacer
gtctatattatcatacgtcaaggaagggta	Protospacer
.*****************************

29. spacer 2.14|500751|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR matches to KJ094031 (Listeria phage LP-124, complete genome) position: , mismatch: 1, identity: 0.967

atctatattatcatacgtcaaggaagggta	CRISPR spacer
gtctatattatcatacgtcaaggaagggta	Protospacer
.*****************************

30. spacer 4.3|1303399|35|NZ_CP054042|PILER-CR,CRT matches to NC_021539 (Listeria phage LP-030-2, complete genome) position: , mismatch: 1, identity: 0.971

ctaaaacatccttcactgtatcaactcctttctat	CRISPR spacer
ctaaaacatccttcactgtctcaactcctttctat	Protospacer
******************* ***************

31. spacer 4.3|1303399|35|NZ_CP054042|PILER-CR,CRT matches to KJ094023 (Listeria phage LP-101, complete genome) position: , mismatch: 1, identity: 0.971

ctaaaacatccttcactgtatcaactcctttctat	CRISPR spacer
ctaaaacatccttcactgtctcaactcctttctat	Protospacer
******************* ***************

32. spacer 4.7|1303399|36|NZ_CP054042|CRISPRCasFinder matches to NC_021539 (Listeria phage LP-030-2, complete genome) position: , mismatch: 1, identity: 0.972

ctaaaacatccttcactgtatcaactcctttctata	CRISPR spacer
ctaaaacatccttcactgtctcaactcctttctata	Protospacer
******************* ****************

33. spacer 4.7|1303399|36|NZ_CP054042|CRISPRCasFinder matches to KJ094023 (Listeria phage LP-101, complete genome) position: , mismatch: 1, identity: 0.972

ctaaaacatccttcactgtatcaactcctttctata	CRISPR spacer
ctaaaacatccttcactgtctcaactcctttctata	Protospacer
******************* ****************

34. spacer 2.2|499958|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR matches to KJ094028 (Listeria phage LP-083-1 contig 2, partial genome) position: , mismatch: 2, identity: 0.933

accgaagtaggttagggtatcgccgatttt	CRISPR spacer
tccgaaataggttagggtatcgccgatttt	Protospacer
 *****.***********************

35. spacer 2.2|499958|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR matches to DQ003641 (Listeria phage P35, complete genome) position: , mismatch: 2, identity: 0.933

accgaagtaggttagggtatcgccgatttt	CRISPR spacer
tccgaaataggttagggtatcgccgatttt	Protospacer
 *****.***********************

36. spacer 2.5|500156|31|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR matches to MH341452 (Listeria phage PSU-VKH-LP040, complete genome) position: , mismatch: 2, identity: 0.935

tcgaatgtgtaagcttctgagtaacctagca	CRISPR spacer
tcaaacgtgtaagcttctgagtaacctagca	Protospacer
**.**.*************************

37. spacer 2.5|500156|31|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR matches to DQ003637 (Listeria phage A500, complete genome) position: , mismatch: 2, identity: 0.935

tcgaatgtgtaagcttctgagtaacctagca	CRISPR spacer
tcaaacgtgtaagcttctgagtaacctagca	Protospacer
**.**.*************************

38. spacer 2.6|500223|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR matches to NC_003216 (Listeria phage A118, complete genome) position: , mismatch: 2, identity: 0.933

taacctttaaaattaaattgaaggtgcgga	CRISPR spacer
tagcctttataattaaattgaaggtgcgga	Protospacer
**.****** ********************

39. spacer 2.6|500223|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR matches to AJ242593 (Bacteriophage A118 complete genome) position: , mismatch: 2, identity: 0.933

taacctttaaaattaaattgaaggtgcgga	CRISPR spacer
tagcctttataattaaattgaaggtgcgga	Protospacer
**.****** ********************

40. spacer 2.6|500223|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR matches to X85008 (Bacteriophage A118 hol118 and ply118 genes) position: , mismatch: 2, identity: 0.933

taacctttaaaattaaattgaaggtgcgga	CRISPR spacer
tagcctttataattaaattgaaggtgcgga	Protospacer
**.****** ********************

41. spacer 4.1|1303270|37|NZ_CP054042|PILER-CR,CRT matches to NC_009812 (Listeria phage B025, complete genome) position: , mismatch: 2, identity: 0.946

tttatttctcctacgcttttcttatttctgtaaataa	CRISPR spacer
tttatttctcctgcgcttttcttatttttgtaaataa	Protospacer
************.**************.*********

42. spacer 4.3|1303399|35|NZ_CP054042|PILER-CR,CRT matches to NC_009812 (Listeria phage B025, complete genome) position: , mismatch: 2, identity: 0.943

ctaaaacatccttcactgtatcaactcctttctat	CRISPR spacer
ctaaaacatccttcactatctcaactcctttctat	Protospacer
*****************.* ***************

43. spacer 4.7|1303399|36|NZ_CP054042|CRISPRCasFinder matches to NC_009812 (Listeria phage B025, complete genome) position: , mismatch: 2, identity: 0.944

ctaaaacatccttcactgtatcaactcctttctata	CRISPR spacer
ctaaaacatccttcactatctcaactcctttctata	Protospacer
*****************.* ****************

44. spacer 4.5|1303270|38|NZ_CP054042|CRISPRCasFinder matches to NC_009812 (Listeria phage B025, complete genome) position: , mismatch: 3, identity: 0.921

tttatttctcctacgcttttcttatttctgtaaataag	CRISPR spacer
tttatttctcctgcgcttttcttatttttgtaaataaa	Protospacer
************.**************.*********.

45. spacer 2.5|500156|31|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR matches to NC_003216 (Listeria phage A118, complete genome) position: , mismatch: 4, identity: 0.871

tcgaatgtgtaagcttctgagtaacctagca	CRISPR spacer
tcgaatgtgtaagcttccgaataacctaaaa	Protospacer
*****************.**.*******. *

46. spacer 2.5|500156|31|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR matches to AJ242593 (Bacteriophage A118 complete genome) position: , mismatch: 4, identity: 0.871

tcgaatgtgtaagcttctgagtaacctagca	CRISPR spacer
tcgaatgtgtaagcttccgaataacctaaaa	Protospacer
*****************.**.*******. *

47. spacer 2.13|500685|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR matches to MN693541 (Marine virus AFVG_25M436, complete genome) position: , mismatch: 5, identity: 0.833

-tacatcgctaccaatcaatccgctattaag	CRISPR spacer
ataca-ggttaccaatcaaaccgctattaac	Protospacer
 ****  *.********** ********** 

48. spacer 2.14|500751|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR matches to MK327943 (Escherichia phage vB_EcoM_G53, complete genome) position: , mismatch: 6, identity: 0.8

atctatattatcatacgtcaaggaagggta	CRISPR spacer
gtctatagtatcatacctcaaggagaagta	Protospacer
.****** ******** *******...***

49. spacer 2.1|499892|30|NZ_CP054042|CRISPRCasFinder,CRT matches to MK813941 (Aeromonas phage 4_L372XY, complete genome) position: , mismatch: 7, identity: 0.767

ttcgtccaatgtacctcgccttttttgtct	CRISPR spacer
taatttcaatgtacctcgccaattttgtcg	Protospacer
*   *.**************  ******* 

50. spacer 2.8|500355|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR matches to NC_041887 (Rhodococcus phage Weasels2, complete genome) position: , mismatch: 7, identity: 0.767

tcatatattatgaatatcgagatagtgttc	CRISPR spacer
ttctatattatgaagatcgaaatagttatg	Protospacer
*. *********** *****.*****  * 

51. spacer 2.9|500421|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR matches to NC_015498 (Glaciecola sp. 4H-3-7+YE-5 plasmid pGLAAG01, complete sequence) position: , mismatch: 7, identity: 0.767

gttttctattttggtgactttagtactttt	CRISPR spacer
gccttctattttagtgactttagtagtgaa	Protospacer
*..*********.************ *   

52. spacer 2.11|500553|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP053711 (Acetobacteraceae bacterium strain PAMC 26569 plasmid unnamed4, complete sequence) position: , mismatch: 7, identity: 0.767

tattcgatctatcggacgtgtcgacattat	CRISPR spacer
gattcgatctagcggacgtgacgacacctc	Protospacer
 ********** ******** *****.. .

53. spacer 2.11|500553|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP053711 (Acetobacteraceae bacterium strain PAMC 26569 plasmid unnamed4, complete sequence) position: , mismatch: 7, identity: 0.767

tattcgatctatcggacgtgtcgacattat	CRISPR spacer
gattcgatctagcggacgtgacgacacctc	Protospacer
 ********** ******** *****.. .

54. spacer 2.13|500685|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP042479 (Citrobacter freundii strain C50 plasmid pC50_001, complete sequence) position: , mismatch: 7, identity: 0.767

tacatcgctaccaatcaatccgctattaag	CRISPR spacer
ggcaccgctaccaatccatccgctatcaca	Protospacer
 .**.*********** *********.* .

55. spacer 2.6|500223|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP043436 (Campylobacter fetus subsp. venerealis NCTC 10354 plasmid p3226, complete sequence) position: , mismatch: 8, identity: 0.733

taacctttaaaattaaattgaaggtgcgga	CRISPR spacer
caacctttaaaattaaatttaaagaaatta	Protospacer
.****************** **.* .   *

56. spacer 2.6|500223|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016721 (Lactococcus lactis subsp. lactis strain UC11 plasmid pUC11B, complete sequence) position: , mismatch: 8, identity: 0.733

taacctttaaaattaaattgaaggtgcgga	CRISPR spacer
aagaatttaaaattaaatagaaggtgataa	Protospacer
 *.  ************* *******  .*

57. spacer 2.6|500223|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016727 (Lactococcus lactis subsp. lactis strain UC08 plasmid pUC08B, complete sequence) position: , mismatch: 8, identity: 0.733

taacctttaaaattaaattgaaggtgcgga	CRISPR spacer
aagaatttaaaattaaatagaaggtgataa	Protospacer
 *.  ************* *******  .*

58. spacer 2.6|500223|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP008809 (Campylobacter fetus subsp. fetus 04/554 plasmid pCFF04554, complete sequence) position: , mismatch: 8, identity: 0.733

taacctttaaaattaaattgaaggtgcgga	CRISPR spacer
caacctttaaaattaaatttaaagaaatta	Protospacer
.****************** **.* .   *

59. spacer 2.6|500223|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP008812 (Campylobacter fetus subsp. venerealis 97/608 plasmid pCFV97608-2, complete sequence) position: , mismatch: 8, identity: 0.733

taacctttaaaattaaattgaaggtgcgga	CRISPR spacer
caacctttaaaattaaatttaaagaaatta	Protospacer
.****************** **.* .   *

60. spacer 2.6|500223|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018792 (Campylobacter sp. RM8964 plasmid pVIC8964, complete sequence) position: , mismatch: 8, identity: 0.733

taacctttaaaattaaattgaaggtgcgga	CRISPR spacer
caacctttaaaattaaatttaaagaaatta	Protospacer
.****************** **.* .   *

61. spacer 2.6|500223|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016699 (Lactococcus lactis subsp. lactis strain 275 plasmid p275A, complete sequence) position: , mismatch: 8, identity: 0.733

taacctttaaaattaaattgaaggtgcgga	CRISPR spacer
aagaatttaaaattaaatagaaggtgacaa	Protospacer
 *.  ************* *******  .*

62. spacer 2.6|500223|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018794 (Campylobacter sp. RM12175 plasmid pVIC12175-1, complete sequence) position: , mismatch: 8, identity: 0.733

taacctttaaaattaaattgaaggtgcgga	CRISPR spacer
caacctttaaaattaaatttaaagaaatta	Protospacer
.****************** **.* .   *

63. spacer 2.6|500223|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR matches to KC699836 (Bacillus phage SIOphi, partial genome) position: , mismatch: 8, identity: 0.733

taacctttaaaattaaattgaaggtgcgga	CRISPR spacer
tccaacttaaatttaaattgaaagtgcggg	Protospacer
*    .***** **********.******.

64. spacer 2.9|500421|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015799 (Borrelia mayonii strain MN14-1539 plasmid cp32-13, complete sequence) position: , mismatch: 8, identity: 0.733

gttttctattttggtgactttagtactttt	CRISPR spacer
gaaaataatgttggtgactttattactttt	Protospacer
*    . ** ************ *******

65. spacer 2.11|500553|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR matches to NC_014120 (Paraburkholderia sp. CCGE1002 plasmid pBC201, complete sequence) position: , mismatch: 8, identity: 0.733

tattcgatctatcggacgtgtcgacattat	CRISPR spacer
ttttcgatctatcggacgtggcgctgggaa	Protospacer
* ****************** ** ..  * 

66. spacer 2.12|500619|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR matches to NC_015427 (Clostridium botulinum BKT015925 plasmid p4BKT015925, complete sequence) position: , mismatch: 8, identity: 0.733

tattgactcggaaatgaaaacaaaaggtca	CRISPR spacer
taaatcttcggaaataaaaacaaaaggttg	Protospacer
**    .********.************..

67. spacer 2.13|500685|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP041048 (Citrobacter sp. CF971 plasmid pBM527-2, complete sequence) position: , mismatch: 8, identity: 0.733

tacatcgctaccaatcaatccgctattaag	CRISPR spacer
ggcaccgctaccaatccatccgctatcgca	Protospacer
 .**.*********** *********.. .

68. spacer 2.13|500685|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR matches to MN783744 (Klebsiella oxytoca plasmid pFDL-VIM, complete sequence) position: , mismatch: 8, identity: 0.733

tacatcgctaccaatcaatccgctattaag	CRISPR spacer
ggcaccgctaccaatccatccgctatcgca	Protospacer
 .**.*********** *********.. .

69. spacer 2.13|500685|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR matches to NC_012885 (Aeromonas hydrophila plasmid pRA1, complete sequence) position: , mismatch: 8, identity: 0.733

tacatcgctaccaatcaatccgctattaag	CRISPR spacer
ggcaccgctaccaatccatccgctatcgca	Protospacer
 .**.*********** *********.. .

70. spacer 2.13|500685|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022274 (Citrobacter freundii strain 18-1 plasmid pA18-1, complete sequence) position: , mismatch: 8, identity: 0.733

tacatcgctaccaatcaatccgctattaag	CRISPR spacer
ggcaccgctaccaatccatccgctatcgca	Protospacer
 .**.*********** *********.. .

71. spacer 2.13|500685|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP042536 (Citrobacter freundii strain E51 plasmid pE51_002, complete sequence) position: , mismatch: 8, identity: 0.733

tacatcgctaccaatcaatccgctattaag	CRISPR spacer
ggcaccgctaccaatccatccgctatcgca	Protospacer
 .**.*********** *********.. .

72. spacer 2.13|500685|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034714 (Salmonella enterica subsp. enterica serovar Mikawasima strain RSE15 plasmid pRSE15, complete sequence) position: , mismatch: 8, identity: 0.733

tacatcgctaccaatcaatccgctattaag	CRISPR spacer
ggcaccgctaccaatccatccgctatcgca	Protospacer
 .**.*********** *********.. .

73. spacer 2.13|500685|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010360 (Enterobacter roggenkampii strain 35734 plasmid p35734-141.404kb, complete sequence) position: , mismatch: 8, identity: 0.733

tacatcgctaccaatcaatccgctattaag	CRISPR spacer
ggcaccgctaccaatccatccgctatcgca	Protospacer
 .**.*********** *********.. .

74. spacer 2.13|500685|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012168 (Enterobacter hormaechei subsp. steigerwaltii strain 34998 plasmid p34998-239.973kb, complete sequence) position: , mismatch: 8, identity: 0.733

tacatcgctaccaatcaatccgctattaag	CRISPR spacer
ggcaccgctaccaatccatccgctatcgca	Protospacer
 .**.*********** *********.. .

75. spacer 2.13|500685|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR matches to MN783743 (Escherichia coli plasmid pGA_VIM, complete sequence) position: , mismatch: 8, identity: 0.733

tacatcgctaccaatcaatccgctattaag	CRISPR spacer
ggcaccgctaccaatccatccgctatcgca	Protospacer
 .**.*********** *********.. .

76. spacer 2.13|500685|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034084 (Klebsiella pneumoniae subsp. pneumoniae strain R210-2 plasmid pR210-2-VIM, complete sequence) position: , mismatch: 8, identity: 0.733

tacatcgctaccaatcaatccgctattaag	CRISPR spacer
ggcaccgctaccaatccatccgctatcgca	Protospacer
 .**.*********** *********.. .

77. spacer 2.13|500685|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MH220284 (Aeromonas sp. pRIVM0001_VIM-1 plasmid pRIVM0001_VIM-1_171012_B12, complete sequence) position: , mismatch: 8, identity: 0.733

tacatcgctaccaatcaatccgctattaag	CRISPR spacer
ggcaccgctaccaatccatccgctatcgca	Protospacer
 .**.*********** *********.. .

78. spacer 2.13|500685|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MG228427 (Kluyvera cryocrescens strain BO64W plasmid pKC-BO-N1-VIM, complete sequence) position: , mismatch: 8, identity: 0.733

tacatcgctaccaatcaatccgctattaag	CRISPR spacer
ggcaccgctaccaatccatccgctatcgca	Protospacer
 .**.*********** *********.. .

79. spacer 2.13|500685|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MG550958 (Escherichia coli strain G3216 plasmid pG3216.2, complete sequence) position: , mismatch: 8, identity: 0.733

tacatcgctaccaatcaatccgctattaag	CRISPR spacer
ggcaccgctaccaatccatccgctatcgca	Protospacer
 .**.*********** *********.. .

80. spacer 2.13|500685|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MH325469 (Enterobacter hormaechei strain Ec13 plasmid pEc13, complete sequence) position: , mismatch: 8, identity: 0.733

tacatcgctaccaatcaatccgctattaag	CRISPR spacer
ggcaccgctaccaatccatccgctatcgca	Protospacer
 .**.*********** *********.. .

81. spacer 2.13|500685|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MH325468 (Enterobacter hormaechei strain Ec09 plasmid pEc09, complete sequence) position: , mismatch: 8, identity: 0.733

tacatcgctaccaatcaatccgctattaag	CRISPR spacer
ggcaccgctaccaatccatccgctatcgca	Protospacer
 .**.*********** *********.. .

82. spacer 2.13|500685|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MH594478 (Citrobacter freundii strain AA593 plasmid pIBAC_Incx3_A/C, complete sequence) position: , mismatch: 8, identity: 0.733

tacatcgctaccaatcaatccgctattaag	CRISPR spacer
ggcaccgctaccaatccatccgctatcgca	Protospacer
 .**.*********** *********.. .

83. spacer 2.13|500685|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MH594477 (Citrobacter freundii strain AA535 plasmid pIBAC_IncA/C, complete sequence) position: , mismatch: 8, identity: 0.733

tacatcgctaccaatcaatccgctattaag	CRISPR spacer
ggcaccgctaccaatccatccgctatcgca	Protospacer
 .**.*********** *********.. .

84. spacer 2.13|500685|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MG053108 (Citrobacter freundii strain 33587 plasmid pCf587, complete sequence) position: , mismatch: 8, identity: 0.733

tacatcgctaccaatcaatccgctattaag	CRISPR spacer
ggcaccgctaccaatccatccgctatcgca	Protospacer
 .**.*********** *********.. .

85. spacer 2.9|500421|30|NZ_CP054042|CRISPRCasFinder,CRT,PILER-CR matches to JQ680352 (Unidentified phage clone 1013_scaffold1713 genomic sequence) position: , mismatch: 9, identity: 0.7

gttttctattttggtgactttagtactttt	CRISPR spacer
cctttctattttggtgagtttagtgaccca	Protospacer
 .*************** ******. ... 

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 275720 : 318123 65 Listeria_phage(95.31%) tail,integrase,terminase,holin attL 276257:276276|attR 315664:315683
DBSCAN-SWA_2 322041 : 329885 7 Streptococcus_phage(50.0%) NA NA
DBSCAN-SWA_3 416345 : 511298 105 Listeria_phage(86.67%) tail,portal,terminase,holin,integrase,plate,capsid,tRNA,protease attL 449727:449776|attR 489044:489093
DBSCAN-SWA_4 658471 : 668502 7 Tupanvirus(33.33%) NA NA
DBSCAN-SWA_5 884227 : 935456 55 Listeria_phage(20.0%) tRNA,transposase,tail,holin NA
DBSCAN-SWA_6 1436620 : 1471061 45 Listeria_phage(48.39%) head,portal,terminase,integrase,tail,holin,capsid,protease attL 1446314:1446331|attR 1482008:1482025
DBSCAN-SWA_7 1917948 : 1925371 8 Hokovirus(33.33%) NA NA
DBSCAN-SWA_8 2056169 : 2115678 58 Bacillus_virus(16.67%) tRNA,protease NA
DBSCAN-SWA_9 2631558 : 2639844 8 Synechococcus_phage(33.33%) NA NA
Click the colored protein region to show detailed information
Click the colored protein region to show detailed information
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
NZ_CP054042.1|WP_003731276.1|450946_451198_+|hypothetical-protein 450946_451198_+ 83 aa aa AcrIIA12 NA NA 416345-511298 yes
NZ_CP054042.1|WP_023552266.1|1444999_1445248_+|DUF3850-domain-containing-protein 1444999_1445248_+ 82 aa aa NA NA NA 1436620-1471061 yes