CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_FFHB01000007	Listeria monocytogenes strain 2842STDY5753912, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_FFHB01000002	Listeria monocytogenes strain 2842STDY5753912, whole genome shotgun sequence	2 crisprs	cas3,DinG,csa3,cas9,cas1,cas2,csn2	1	30	1	0
NZ_FFHB01000004	Listeria monocytogenes strain 2842STDY5753912, whole genome shotgun sequence	0 crisprs	csa3,WYL	0	0	2	5
NZ_FFHB01000008	Listeria monocytogenes strain 2842STDY5753912, whole genome shotgun sequence	0 crisprs	NA	0	0	0	0
NZ_FFHB01000001	Listeria monocytogenes strain 2842STDY5753912, whole genome shotgun sequence	1 crisprs	cas6,cas8b2,cas7,cas5,cas3,cas2,DEDDh	2	14	2	0
NZ_FFHB01000006	Listeria monocytogenes strain 2842STDY5753912, whole genome shotgun sequence	0 crisprs	csa3,cas5	0	0	1	0
NZ_FFHB01000003	Listeria monocytogenes strain 2842STDY5753912, whole genome shotgun sequence	1 crisprs	WYL,casR,DinG	0	0	0	0
NZ_FFHB01000005	Listeria monocytogenes strain 2842STDY5753912, whole genome shotgun sequence	0 crisprs	NA	0	0	1	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_FFHB01000002_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_FFHB01000002_1

27005-27159

Unclear

Consensus_repeat	Method
GTCTCTGGCAAAGCAAGTCTTAACTCTTCATCCGTAGGTGGTGGTGGAAA	CRISPRCasFinder

1 spacers

cas3

The CRISPR arrays of NZ_FFHB01000002_1

>merge|NZ_FFHB01000002|1|27005-27159|CRISPRCasFinder
GTCTCTGGCAAAGCAAGTCTTAACTCTTCATCCGTAGGTGGTGGTGGAAATTCGAATGAGCTCGGTTCCGATGTAGCAGGAGCATTAAAACCAAGAAGCATCGGTGTCTCTGGCAAAGCAAGTCTTAACTCTTCATCCGTAGGTGGTGGTGGAAA

>NZ_FFHB01000002|1|1|27005-27159|CRISPRCasFinder
GTCTCTGGCAAAGCAAGTCTTAACTCTTCATCCGTAGGTGGTGGTGGAAA	TTCGAATGAGCTCGGTTCCGATGTAGCAGGAGCATTAAAACCAAGAAGCATCGGT
GTCTCTGGCAAAGCAAGTCTTAACTCTTCATCCGTAGGTGGTGGTGGAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_FFHB01000002.1\|WP_003725734.1\|24137_24599_-\|YehR-family-lipoprotein	unknown	unknown	gnl\|CDD\|227145
NZ_FFHB01000002.1\|WP_003731748.1\|25126_25996_-\|phosphatidylcholine-phospholipase-C	unknown	unknown	gnl\|CDD\|214813
NZ_FFHB01000002.1\|WP_172381192.1\|22966_23686_+\|DNA-alkylation-repair-protein	unknown	unknown	gnl\|CDD\|378033
NZ_FFHB01000002.1\|WP_003722728.1\|33832_34789_-\|ribose-phosphate-diphosphokinase	unknown	unknown	gnl\|CDD\|234929
NZ_FFHB01000002.1\|WP_003726703.1\|31849_32803_+\|phosphatidylinositol-specific-phospholipase-C	unknown	unknown	gnl\|CDD\|176497
NZ_FFHB01000002.1\|WP_003722723.1\|39223_39916_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213222
NZ_FFHB01000002.1\|WP_003722726.1\|36599_36908_-\|septation-regulator-SpoVG	unknown	unknown	gnl\|CDD\|237321
NZ_FFHB01000002.1\|WP_003725737.1\|20401_20986_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379228
NZ_FFHB01000002.1\|WP_003722739.1\|21992_22934_+\|L-lactate-dehydrogenase	unknown	unknown	gnl\|CDD\|178836
NZ_FFHB01000002.1\|WP_003725735.1\|23752_24085_+\|putative-heavy-metal-binding-protein	unknown	unknown	gnl\|CDD\|179228
NZ_FFHB01000002.1\|WP_003722740.1\|21075_21699_-\|50S-ribosomal-protein-L25/general-stress-protein-Ctc	unknown	unknown	gnl\|CDD\|235534
NZ_FFHB01000002.1\|WP_003725507.1\|38018_39227_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|182528
NZ_FFHB01000002.1\|WP_003731749.1\|24731_25055_-\|DUF5502-family-protein	unknown	unknown	gnl\|CDD\|340321
NZ_FFHB01000002.1\|WP_003728173.1\|28150_29683_-\|zinc-metalloproteinase-Mpl	unknown	unknown	gnl\|CDD\|225768
NZ_FFHB01000002.1\|WP_003722729.1\|33075_33789_+\|listeriolysin-O-transcriptional-regulator-PrfA	unknown	unknown	gnl\|CDD\|223736
NZ_FFHB01000002.1\|WP_003728175.1\|34839_36213_-\|bifunctional-UDP-N-acetylglucosamine-diphosphorylase/glucosamine-1-phosphate-N-acetyltransferase-GlmU	unknown	unknown	gnl\|CDD\|184643
NZ_FFHB01000002.1\|WP_003725738.1\|19734_20295_-\|aminoacyl-tRNA-hydrolase	unknown	unknown	gnl\|CDD\|235457
NZ_FFHB01000002.1\|WP_061729890.1\|30017_31607_-\|cholesterol-dependent-cytolysin-listeriolysin-O	unknown	unknown	gnl\|CDD\|366559
NZ_FFHB01000002.1\|WP_003722725.1\|37026_37335_-\|septation-regulator-SpoVG	unknown	unknown	gnl\|CDD\|237321
NZ_FFHB01000002.1\|WP_003728167.1\|16081_19621_-\|transcription-repair-coupling-factor	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|224118

Protein	Function_ID	Function_description	E-value
NZ_FFHB01000002.1\|WP_003725734.1\|24137_24599_-\|YehR-family-lipoprotein	gnl\|CDD\|227145	COG4808, COG4808, Uncharacterized protein conserved in bacteria [Function unknown].	1.52192e-59
NZ_FFHB01000002.1\|WP_003731748.1\|25126_25996_-\|phosphatidylcholine-phospholipase-C	gnl\|CDD\|214813	smart00770, Zn_dep_PLPC, Zinc dependent phospholipase C (alpha toxin). This domain conveys a zinc dependent phospholipase C activity (EC 3.1.4.3). It is found in a monomeric phospholipase C of Bacillus cereus as well as in the alpha toxin of Clostridium perfringens and Clostridium bifermentans, which is involved in haemolysis and cell rupture. It is also found in a lecithinase of Listeria monocytogenes, which is involved in breaking the 2-membrane vacuoles that surround the bacterium. Structure information: PDB 1ca1.	4.429e-86
NZ_FFHB01000002.1\|WP_172381192.1\|22966_23686_+\|DNA-alkylation-repair-protein	gnl\|CDD\|378033	pfam08713, DNA_alkylation, DNA alkylation repair enzyme. Proteins in this family are predicted to be DNA alkylation repair enzymes. The structure of a hypothetical protein in this family shows it to adopt a supercoiled alpha helical structure.	3.05419e-22
NZ_FFHB01000002.1\|WP_003722728.1\|33832_34789_-\|ribose-phosphate-diphosphokinase	gnl\|CDD\|234929	PRK01259, PRK01259, ribose-phosphate diphosphokinase.	0
NZ_FFHB01000002.1\|WP_003726703.1\|31849_32803_+\|phosphatidylinositol-specific-phospholipase-C	gnl\|CDD\|176497	cd00137, PI-PLCc, Catalytic domain of prokaryotic and eukaryotic phosphoinositide-specific phospholipase C. This subfamily corresponds to the catalytic domain present in prokaryotic and eukaryotic phosphoinositide-specific phospholipase C (PI-PLC), which is a ubiquitous enzyme catalyzing the cleavage of the sn3-phosphodiester bond in the membrane phosphoinositides (phosphatidylinositol, PI; Phosphatidylinositol-4-phosphate, PIP; phosphatidylinositol 4,5-bisphosphate, PIP2) to yield inositol phosphates (inositol monosphosphate, InsP; inositol diphosphate, InsP2; inositol trisphosphate, InsP3) and diacylglycerol (DAG). The higher eukaryotic PI-PLCs (EC 3.1.4.11) have a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. They play a critical role in most signal transduction pathways, controlling numerous cellular events, such as cell growth, proliferation, excitation and secretion. These PI-PLCs strictly require Ca2+ for their catalytic activity. They display a clear preference towards the hydrolysis of the more highly phosphorylated PI-analogues, PIP2 and PIP, to generate two important second messengers, InsP3 and DAG. InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. In contrast, bacterial PI-PLCs contain a single catalytic domain. Although their precise physiological function remains unclear, bacterial PI-PLCs may function as virulence factors in some pathogenic bacteria. They participate in Ca2+-independent PI metabolism. They are characterized as phosphatidylinositol-specific phospholipase C (EC 4.6.1.13) that selectively hydrolyze PI, not PIP or PIP2. The TIM-barrel type catalytic domain in bacterial PI-PLCs is very similar to the one in eukaryotic PI-PLCs, in which the catalytic domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. The catalytic mechanism of both prokaryotic and eukaryotic PI-PLCs is based on general base and acid catalysis utilizing two well conserved histidines, and consists of two steps, a phosphotransfer and a phosphodiesterase reaction. This superfamily also includes a distinctly different type of eukaryotic PLC, glycosylphosphatidylinositol-specific phospholipase C (GPI-PLC), an integral membrane protein characterized in the protozoan parasite Trypanosoma brucei. T. brucei GPI-PLC hydrolyzes the GPI-anchor on the variant specific glycoprotein (VSG), releasing dimyristyl glycerol (DMG), which may facilitate the evasion of the protozoan to the host#s immune system. It does not require Ca2+ for its activity and is more closely related to bacterial PI-PLCs, but not mammalian PI-PLCs.	1.53279e-112
NZ_FFHB01000002.1\|WP_003722723.1\|39223_39916_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213222	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein. This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of lipoproteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyzes the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.	7.27113e-121
NZ_FFHB01000002.1\|WP_003722726.1\|36599_36908_-\|septation-regulator-SpoVG	gnl\|CDD\|237321	PRK13259, PRK13259, septation regulator SpoVG.	5.03804e-54
NZ_FFHB01000002.1\|WP_003725737.1\|20401_20986_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379228	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	1.9401e-09
NZ_FFHB01000002.1\|WP_003722739.1\|21992_22934_+\|L-lactate-dehydrogenase	gnl\|CDD\|178836	PRK00066, ldh, L-lactate dehydrogenase; Reviewed.	0
NZ_FFHB01000002.1\|WP_003725735.1\|23752_24085_+\|putative-heavy-metal-binding-protein	gnl\|CDD\|179228	PRK01119, PRK01119, putative heavy metal-binding protein.	8.98192e-61
NZ_FFHB01000002.1\|WP_003722740.1\|21075_21699_-\|50S-ribosomal-protein-L25/general-stress-protein-Ctc	gnl\|CDD\|235534	PRK05618, PRK05618, 50S ribosomal protein L25/general stress protein Ctc; Reviewed.	2.38585e-63
NZ_FFHB01000002.1\|WP_003725507.1\|38018_39227_-\|ABC-transporter-permease	gnl\|CDD\|182528	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB.	5.06393e-62
NZ_FFHB01000002.1\|WP_003731749.1\|24731_25055_-\|DUF5502-family-protein	gnl\|CDD\|340321	pfam17606, DUF5502, Family of unknown function (DUF5502). This is a family of unknown function found in Listeria.	1.35733e-43
NZ_FFHB01000002.1\|WP_003728173.1\|28150_29683_-\|zinc-metalloproteinase-Mpl	gnl\|CDD\|225768	COG3227, LasB, Zinc metalloprotease (elastase) [Amino acid transport and metabolism].	8.72102e-140
NZ_FFHB01000002.1\|WP_003722729.1\|33075_33789_+\|listeriolysin-O-transcriptional-regulator-PrfA	gnl\|CDD\|223736	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms].	9.59942e-12
NZ_FFHB01000002.1\|WP_003728175.1\|34839_36213_-\|bifunctional-UDP-N-acetylglucosamine-diphosphorylase/glucosamine-1-phosphate-N-acetyltransferase-GlmU	gnl\|CDD\|184643	PRK14354, glmU, bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU.	0
NZ_FFHB01000002.1\|WP_003725738.1\|19734_20295_-\|aminoacyl-tRNA-hydrolase	gnl\|CDD\|235457	PRK05426, PRK05426, peptidyl-tRNA hydrolase; Provisional.	1.72721e-108
NZ_FFHB01000002.1\|WP_061729890.1\|30017_31607_-\|cholesterol-dependent-cytolysin-listeriolysin-O	gnl\|CDD\|366559	pfam01289, Thiol_cytolysin, Thiol-activated cytolysin.	8.6603e-179
NZ_FFHB01000002.1\|WP_003722725.1\|37026_37335_-\|septation-regulator-SpoVG	gnl\|CDD\|237321	PRK13259, PRK13259, septation regulator SpoVG.	2.92652e-53
NZ_FFHB01000002.1\|WP_003728167.1\|16081_19621_-\|transcription-repair-coupling-factor	gnl\|CDD\|224118	COG1197, Mfd, Transcription-repair coupling factor (superfamily II helicase) [DNA replication, recombination, and repair / Transcription].	0

>NZ_FFHB01000002.1|WP_003731748.1|25126_25996_-|phosphatidylcholine-phospholipase-C
MKFKKVVLGMCLTASVLVFPVTIKASACCDEYLKPPAAPHDIDSKLPHKLSWSADNPTNTDVNTHYWLFKQAEKILAKDVDHMRANLMNELKNFDKQIAQGIYDADHKNPYYDTSTFLSHFYNPDKDNTYLPGFANAKITGAKYFNQSVADYREGKFDTAFYKLGLAIHYYTDISQPMHANNFTAISYPPGYHCAYENYVDTIKHNYQATEDMVVKRFCSDDVKEWLYENAKRAKADYPKIVNAKTKKSYLVGNSEWKKDTVEPTGARLRDSQQTLAGFLEFWSKKTNE
>NZ_FFHB01000002.1|WP_003731749.1|24731_25055_-|DUF5502-family-protein
MYIKGRLIFFFVMFVIALCSVLILLIIKMSVWKEEPFNLSDAKEIECLGSCKIKNTNQKIHFFSIKKNLFEEEGNMAGILNEHERKGADKSIFIVILDDEKGIANEE
>NZ_FFHB01000002.1|WP_003725734.1|24137_24599_-|YehR-family-lipoprotein
MKMLKKGTTVLFVMIMAVMLVACGDKEETKTYSLSQNGVDSKLTYTYKGDKVTKQTAENTMSYASLGVASKEDAEKMLKATSDKFQGIDGLKEKIEYKDDKAIETLEVDYTKISSEDMNKIPGMSSNGDTSKGISMEESAKMLESQGYKEVSK
>NZ_FFHB01000002.1|WP_003725735.1|23752_24085_+|putative-heavy-metal-binding-protein
MIVTTSPNIEGKQIIEYKKIVFGEVITGVNFMKDIGAGLRNFFGGRSQGYEDELINAREEAIREMEQRAKDIGANAVIGVDIDYEVLGADNGMLMVTASGTAVVIEAQDY
>NZ_FFHB01000002.1|WP_172381192.1|22966_23686_+|DNA-alkylation-repair-protein
MLFLLYLIYSRGVTRTITFDQLNTELQALENPNTIKIFRNHGCPDSLDLYGLKIGDLKKIIRREKLTKNHELAVELIESNNSDLIYLGLLAINPDKITTEQIEKWNIIFHETWSQLTFGLASIVSKRDDALLFAKTWIESDYDLTKSMGWQIYSEHINNLPEAEALLQRAKETLQTETNRTRYSMNGFIITCGIYKDDLHEKAMEAAKSVGKVHVNLGNTACKVPDAISYIEKARNRTK
>NZ_FFHB01000002.1|WP_003722739.1|21992_22934_+|L-lactate-dehydrogenase
MKDHQKIILVGDGAVGSSYAFACVNLSIGQEFGIIDIDKDRTIGDAMDLSHAVPFSTPKKIYSANYSDCHDADLVVVTAGTAQKPGETRLDLVNRNIKIMKGIVDEVMASGFDGIFLIASNPVDILTYATWKFSGLPKERVIGSGTSLDTARFRMSIADYLKVDARNVHGYILGEHGDTEFPAWSHTTVGGLPITEWISEDEQGAMDTIFVSVRDAAYEIINKKGATFYGVAAALARITKAILNNENAILPLSVYLDGHYGMNDIYIGAPAVVNRQGVRHIVEMNLNDKEKEQMKNSADTLKKVLDDAMKQID
>NZ_FFHB01000002.1|WP_003722740.1|21075_21699_-|50S-ribosomal-protein-L25/general-stress-protein-Ctc
MATTLEVQKRETTQHSEVTRLRSEGKVPGIIYGYKSENVPVSVDSLELIKAVRDNGRNAVFSVTVDGKKLNVLLHEYQVDPLKDVLVHVDLLAVDMNEEVETDVRVVLVGDAPGVKAGGVLQQIIHDVKVSATPEKLPETIELDISSLEIGDVLTTNDLPENKDYVVQAEEEETVVTVSAPRAEEEPTTTEAPEPEAVHGKDEEPVE
>NZ_FFHB01000002.1|WP_003725737.1|20401_20986_-|GNAT-family-N-acetyltransferase
MLDKSVPHISAIMVNHDATNYPEFHLPEGYSFCFYKDGLEEDWCRLQLETGQVLSMDSIRARFETEFGNEKEKLAKRCVFVEAPNGEIIGTAMLWDGNTFGEMASRIHWVAVLDSHGGKGIAKALLSKILGLNKSSFVYLTTQTGSYQAIYLYQKFGFEKYVGKTPENWKTVNFQEEKEAAWQIIENKIAEHQA
>NZ_FFHB01000002.1|WP_003725738.1|19734_20295_-|aminoacyl-tRNA-hydrolase
MKLIAGLGNPGKKYERTRHNVGFMVVDELSFRHQTPWKKSKFNGMTSEIIVGGEKMILVKPLTFMNASGECIRPLMDYYNIPIEDVVIVYDDLDLPVGKIRLRQKGSAGGHNGMKSIIQHVKTQEFNRIRVGVSRPLKGEVIHYVLGDFPKAEQPDIIAAIQKSADAIEDFAQTPFIEVMNKYNQK
>NZ_FFHB01000002.1|WP_003728167.1|16081_19621_-|transcription-repair-coupling-factor
MKGLQQLIYEQKDIRAVLNALDEKEKAQLVTGLTGSSRALFASVVEGASKRPVVFVTHNLYHAQKLYDDLLSLMDVDRLFLYPADELISSELSISSPELRGQRVEALDFLLSGKPGIVIVPVAGLRKMLPPVSLWKHFNISIVEGEEIDPDVLRQKLVTMGYTMSGMVNTPGEFSVRGGIIDIYPITEEFPIRIELFDTEVDSLRFFDVETQRSTTRVEEFRLLPATEIILDQSYYPDIVKRLEKKMTHTLNELKENEDKQALVENLEEDLEMLRSGVKPDMFFKYIGLAYPDPASLFDYFPKNTAILLDEFGRILETEESLEREEAEWQTETLSRMETVRDVQVSHSFKKLLEANHSPKIYLSLFQKQMASMRVSKTTNIVYKQMQQFHGQMNVLKTELESWHKNNYAVVILAPNLERAEKMQQTLTDYDMESTILKKESDVPKYGMVQFVIGTFQNGFELPLAKVAIISETELFNKKIKKVKKRQKLSNAERIQSYSELKVGDYVVHVNHGIARYVGMETLDINGVHKDYLLLVYQGEDKLFIPVDQLDLVQKYVGAEGKSPRLNKLGGAEWKRVKKKVQASVQDIADDLIKLYAEREAEKGYAFSADDEMQREFEEAFPYQETEDQLRSISEIKKDMERPRPMDRLLVGDVGYGKTEVALRAAFKAIMDGKQVAFLVPTTILAQQHFETMKERFQGFPIEIGLLSRFRTKKQQTETLKGMKNGTVDVVVGTHRLLSKDVEYQDLGLLIVDEEQRFGVTHKEKIKQMRSKIDVLTLTATPIPRTLHMSMLGVRDLSVIETPPANRFPVQTYVAEQNNVLVREAIERELARDGQVYYLYNRVESITQKADEISAMVPDARVATAHGQMGESELESVILSFLEGEFDVLVTTTIIETGVDIPNVNTLFVQDADRMGLSQLYQLRGRVGRWNRIAYAYFMYQKDKILREEAEKRLSAIKEFTELGSGFKIAMRDLSIRGAGNILGAQQHGFIDSVGFDLYSQMLKEAIEAKKPKEEQKQIVPVEIDIQADAYIPEYYITDGRQKIEMYKRFRNIETLSELEDLQSDMIDRFGEYPEEVEYLFTMTELKVHALEVGIESVKQEQNKITMLFSESGTAGIRGDIVMQIIGEFGRMVGVGMEGTQLKITINVQNKPLKEWLYQVKSLAEKLRGAMKERASAEN
>NZ_FFHB01000002.1|WP_003728173.1|28150_29683_-|zinc-metalloproteinase-Mpl
MKSKLICIIMVIAFQAHFNMAVKADSVGEERLRNNIQAKRNPADLKALPDSCEAKDFYKNFKILDMTKDKLGVTHYTLALSSDGYLTDNDEIKVHVTPDNKITFINGDLQQGQLRITNQIKITEKNAIEKAFEAIGQSEAHVKSYIGNPVKEKEIIINSRTKRLVYNIKLIFAEPEVASWIIQVDAETGAILKKQNMLSEVERADTHKDFQALGKGANRLLQRPLHVMKINDLFYLVDRTHKGLIRTFDLNHKTDASFGKVVSNKTNMFTDPEFSSAVDAHFYASEVYDYYKNVHQLESLDGKGGEIDSFVHYGLNCNNAFWDGREILYGDGDKKNFKPFSCAKTIVGHELTHAVIQYSAGLEYEGQSGALNESFADVFGYFIAPNHWLIGEDVCVRGLRDGRIRSIKDPDKYNQAAHMKDYESLPITEEGDWGGVHFNSGIPNKAAYNTITKLGKEKTEQLYFRALKYYLTKKAQFTDAKKALQQAAKDLYGEDASKKVAEAWEAVGVN
>NZ_FFHB01000002.1|WP_061729890.1|30017_31607_-|cholesterol-dependent-cytolysin-listeriolysin-O
MKKIMLVFITLILVSLPITQQTEAKDASAFNKENLISSMAPPASPPASPKTPIEKKHADEIDKYIQGLDYNKNNVLVYHGDAVTNVPPRKGYKDGNEYIVVEKKKKSINQNNADIQVVNAISSLTYPGALVKANSELVENQPDVLPVKRDSLTLSIDLPGMTNQDNKIVVKNATKSNVNNAVNTLVERWNEKYAQAYPNVSAKIDYDDEMAYSESQLIAKFGTAFKAVNNSLNVNFGAISEGKMQEEVISFKQIYYNVNVNEPTRPSRFFGKAVTKEQLQALGVNAENPPAYISSVAYGRQVYLKLSTNSHSTKVKAAFDAAVSGKSVSGDVELTNIIKNSSFKAVIYGGSAKDEVQIIDGNLGDLRDILKKGATFNRETPGVPIAYTTNFLKDNELAVIKNNSEYIETTSKAYTDGKINIDHSGGYVAQFNISWDEINYDPEGNEIVQHKNWSENNKSKLAHFTSSIYLPGNARNINVYAKECTGLAWEWWRTVIDDRNLPLVKNRNISIWGTTLYPKYSNSVDNPIE
>NZ_FFHB01000002.1|WP_003726703.1|31849_32803_+|phosphatidylinositol-specific-phospholipase-C
MYKNYLQRTLVLVLCFILCFFTFPLGGKAYSLNNWNKPIKNSVTTKQWMSALPDTTSLAALSIPGTHDTMSYNGDMTWTLTKPLAQTQTMSLYQQLEAGIRYIDIRAKDNLKIYHGPIFLNASLSGVLETITQFLKKNPKETIIMRLKDEQNSNDSFDYRIQPLINIYKDYFYTTPRTDTSNKIPTLKDVRGKILLLSENHTKKPLVINSHKFGMQFGASNQVIQDDYNGPSVKTKFKEIVQTAYQASKADNKLFLNHISATSLTFTPRQYAAALNNKVEQFVLNLTSEKVRGLGILIMDFPEKQTIKNIIKNNKFN
>NZ_FFHB01000002.1|WP_003722729.1|33075_33789_+|listeriolysin-O-transcriptional-regulator-PrfA
MNAQAEEFKKYLETNGIKPKQFHKKELIFNQWDPQEYCIFLYDGITKLTSISENGTIMNLQYYKGAFVIMSGFIDTETSVGYYNLEVISEQATAYVIKINELKELLSKNLTHFFYVFQTLQKQVSYSLAKFNDFSINGKLGSICGQLLILTYVYGKETPDGIKITLDNLTMQELGYSSGIAHSSAVSRIISKLKQEKVIVYKNSCFYVQNLDYLKRYAPKLDEWFYLACPATWGKLN
>NZ_FFHB01000002.1|WP_003722728.1|33832_34789_-|ribose-phosphate-diphosphokinase
MSNEYFDPKLKIFSLNSNRELAEEIAKEVGIELGKSSVTHFSDGEIQINIEESIRGCHVYVIQSTSNPVNQNLMELLIMIDALKRASAATINIVMPYYGYARQDRKARSREPITAKLVANLIETAGATRMITLDMHAPQIQGFFDIPIDHLNAVRLLSDYFSERHLGDDLVVVSPDHGGVTRARKMADRLKAPIAIIDKRRPRPNVAEVMNIVGNVEGKVCIIIDDIIDTAGTITLAAKALREAGATKVYACCSHPVLSGPAMKRIEESPIEKLVVTNSIALPEEKWIDKMEQLSVAALLGEAIVRVHENASVSSLFE
>NZ_FFHB01000002.1|WP_003728175.1|34839_36213_-|bifunctional-UDP-N-acetylglucosamine-diphosphorylase/glucosamine-1-phosphate-N-acetyltransferase-GlmU
MSKRYAVVLAAGQGTRMKSKLYKVLHPVCGKPMVEHVVDQISTLNVDKVVTIVGHGAEKVQEHLAGKSEFVKQEEQLGTAHAVLQAKAELAGKDGVTLVVCGDTPLIEASTMEALLKYHHEKRAKATILTTVIEDPTGYGRIIRDDLGIVEKIVEHKDATEKEQRISEINTGTYCFDNKALFEALENVSNDNVQGEYYLPDVIKILKDSDEVVAAYRMESFEESLGVNDRIALAEASRLMQRRINENHMRNGVTLVNPENTYIDIDVKIGQDTVIEPGVMLRGETVIGDDCVVTSGSEIVNSVIGERVHVRTSSIFESKVGDDVQIGPYAHLRPESDIHDHVKIGNYVETKKAVVGEGTKLPHFIYMGDAEIGKNVNVGCGSIAVNYDGKNKAKTIIGDNVFVGCNSNLIAPVKVGDRAFIAAGSTITKDVPDDALGIARAKQDNKLGYAKHLNHGK
>NZ_FFHB01000002.1|WP_003722726.1|36599_36908_-|septation-regulator-SpoVG
MQVTDVRLRRVETDGRMRAIASITLDEEFVVHDIRVIDGNNGLFVAMPSKRGVDGEFRDIAHPINSDTRAKIQEVVLAEYERVGEEEATAVTEEESESVSAE
>NZ_FFHB01000002.1|WP_003722725.1|37026_37335_-|septation-regulator-SpoVG
MEITDVRLRRVETDGRMKAISSITIDGEFVIHDIRVIDGNEGLFVAMPSKRTPDGEFRDIAHPINSGTRAKIQEAVLAAYEVADEPAVNEESSADESIVEEN
>NZ_FFHB01000002.1|WP_003725507.1|38018_39227_-|ABC-transporter-permease
MNVLQSMKMAWKQLKASKLRSFLTMLGIIIGVASVILLVSLGNGVTQEVDDQMGDLGSNLITVVNSSVNPNDKYTYDEVMKYQNIDGVKSVSPELSGQVNATFDYKNSSNKVIGTNDQYKAARSLEMKEGRFLLPIDTEYGQKVAVIGSTVASDLFGFGDPIGETIRLNGMPYKVVGVLKEKGASMMGSSDDQIFIPISSAQRLLKDTNVRTIYVETKSAEDVDFVVNTLESRLAIKFGDEKEQEKNASSAQMGPSYQVINQQEILNAFNTISTTLTTALGAIAAISLVVGGIGIMNIMLVSVSERTREIGIRKALGAKKRAILLQFLIESIVISVCGGIIGIIIGVSGALIFGSVAGISSGITAGTIIFSFVFSLCIGVIFGIAPANKASKLRPIDALRSE
>NZ_FFHB01000002.1|WP_003722723.1|39223_39916_-|ABC-transporter-ATP-binding-protein
MPKPLIDMKNLTKTYTLGGETFKALDDVTFTVEQGEFLSIVGPSGSGKSTLMNMIGCLDVPDEGSYHLDDVDVFKLSDNKLSEIRNKKIGFIFQQFNLLPKLSAFENVELPLIYAGLSVSAREKAAIECLEKVGLLEKRRNLPTQLSGGQQQRVAIARALAGKPQILLADEPTGALDSKTGKEVMGILQELNRAGNTIVMITHDPTIASYGTRSIRIQDGKLFHEEATQA

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Crispr_ID: NZ_FFHB01000002_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_FFHB01000002_2

510290-512901

TypeII

II-A,II-B

Consensus_repeat	Method
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	CRISPRCasFinder
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	CRT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	PILER-CR
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	PILER-CR

39 spacers

csn2,cas2,cas1,cas9

The CRISPR arrays of NZ_FFHB01000002_2

>merge|NZ_FFHB01000002|2|510290-512901|CRISPRCasFinder,CRT,PILER-CR,PILER-CR
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACGCAATAGACCAGTTAGGTGTCACAGGTGCGGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACGATAGTAGTATAATAACTGTGCTAATATGGGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACTTCGTACCATAGTATACACATGCAGGGGCGGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACCATATAGATGTTTCCTTTCTACTCGTATATGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACAAATATTATTCAATGCTGTAACTGTAAAAGGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACTACTTTTATTGTCTGCTAAGAATACTACTAGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACATTGTACAAATTCCAAGTAACTCATCATTAGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACTTTTTCACGTTTGTACTGTCTCTCCTCGTAGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACTAACTTTAGATACTGCTAAAGAATTAGCAAGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACTGTCTGAATGTAGTTAATATCTTCAACTTGGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACCTTCAGTTTCACCTGTGAATACGCCGTTTAGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACGCGCTTCAGTTTCAGCATTGGTCTTCTTAGGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACTCTCTTGCATTTGGTTCTGAATAATCTCGTAGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACAGAGCAATGTAGTCATTCAGCCAATGCCCTGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACATATGGGGGCTTATTGTATGGCTAATATACGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACACGGGGCATTTAATGTTGGCAAGCGCAATTGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACTCCTCAGATAAGGTTTAGTACGCAAGACTCGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACTCCACTTCGACGCTGGACGGGCTCTCCTCAGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACCAATGCTTGGGGCTATGATGGCATGGATAAGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACCTCTTTTCGATATTCCGGAAGAGGTACTCCGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACCTTTTGTGTCTTCGGTAGCTTTGTCCATTAGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACCCAGAGTCGCTTTTTCTTCCGGCCAGTCTGGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACGTGTGTTATCTATTTGTAGCGTGGGTGTATGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACATATACAATGTCTAAGCTTAATCTTTCGGTGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACGAAATAATATTGATAATATCGCTCTTGCTAGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACAGTATTTATTATCTCTATTACTTTTGTATAGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACCGTATTCAAAAGTATATCCGCTAGCCTCAAGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACTAGGTTTAGGGAGTAAATTAGCTCCTTTGGGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACGGTAAAACAAGCATCGGCGAAGCAGTAACAGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACTCCTAAATCTGAAAACAAAAACTACGAGTTGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACTATTGGTGCCGCGATTAAAGTGTTTGACTTGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACAAAGCAATAAATCAGATCATAAAGGAGCCTGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACCGACGGAAAAATTAGACGACGCTAATGTGCGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACGGGCAACGATATTTGTAGATAACAGGGAGTGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACTACGATGTTAAGCGGTGGAGTAGATCAGTAGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACTATAGTCTGTTTTTTCGTAAGTGAGCAGCGCGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACTTGGGCAAAATGACCGTAATAAATCCATTCGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACTTAGCACTTATATAGAAGCCCCGCCCCTACGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACAGTGATGGGGAAGAGATTGAACTTATGTTTGTTTTAGAGCTATATTATTCTGAATATCAACACACA

>NZ_FFHB01000002|2|2|510290-512901|CRISPRCasFinder
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	GCAATAGACCAGTTAGGTGTCACAGGTGCG
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	GATAGTAGTATAATAACTGTGCTAATATGG
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TTCGTACCATAGTATACACATGCAGGGGCG
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	CATATAGATGTTTCCTTTCTACTCGTATAT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	AAATATTATTCAATGCTGTAACTGTAAAAG
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TACTTTTATTGTCTGCTAAGAATACTACTA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	ATTGTACAAATTCCAAGTAACTCATCATTA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TTTTTCACGTTTGTACTGTCTCTCCTCGTA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TAACTTTAGATACTGCTAAAGAATTAGCAA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TGTCTGAATGTAGTTAATATCTTCAACTTG
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	CTTCAGTTTCACCTGTGAATACGCCGTTTA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	GCGCTTCAGTTTCAGCATTGGTCTTCTTAG
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TCTCTTGCATTTGGTTCTGAATAATCTCGTA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	AGAGCAATGTAGTCATTCAGCCAATGCCCT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	ATATGGGGGCTTATTGTATGGCTAATATAC
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	ACGGGGCATTTAATGTTGGCAAGCGCAATT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TCCTCAGATAAGGTTTAGTACGCAAGACTC
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TCCACTTCGACGCTGGACGGGCTCTCCTCA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	CAATGCTTGGGGCTATGATGGCATGGATAA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	CTCTTTTCGATATTCCGGAAGAGGTACTCC
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	CTTTTGTGTCTTCGGTAGCTTTGTCCATTA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	CCAGAGTCGCTTTTTCTTCCGGCCAGTCTG
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	GTGTGTTATCTATTTGTAGCGTGGGTGTAT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	ATATACAATGTCTAAGCTTAATCTTTCGGT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	GAAATAATATTGATAATATCGCTCTTGCTA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	AGTATTTATTATCTCTATTACTTTTGTATA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	CGTATTCAAAAGTATATCCGCTAGCCTCAA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TAGGTTTAGGGAGTAAATTAGCTCCTTTGG
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	GGTAAAACAAGCATCGGCGAAGCAGTAACA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TCCTAAATCTGAAAACAAAAACTACGAGTT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TATTGGTGCCGCGATTAAAGTGTTTGACTT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	AAAGCAATAAATCAGATCATAAAGGAGCCT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	CGACGGAAAAATTAGACGACGCTAATGTGC
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	GGGCAACGATATTTGTAGATAACAGGGAGT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TACGATGTTAAGCGGTGGAGTAGATCAGTA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TATAGTCTGTTTTTTCGTAAGTGAGCAGCGC
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TTGGGCAAAATGACCGTAATAAATCCATTC
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TTAGCACTTATATAGAAGCCCCGCCCCTAC
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	AGTGATGGGGAAGAGATTGAACTTATGTTT
GTTTTAGAGCTATATTATTCTGAATATCAACACACA

>NZ_FFHB01000002|2|1|510290-512901|CRT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	GCAATAGACCAGTTAGGTGTCACAGGTGCG
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	GATAGTAGTATAATAACTGTGCTAATATGG
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TTCGTACCATAGTATACACATGCAGGGGCG
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	CATATAGATGTTTCCTTTCTACTCGTATAT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	AAATATTATTCAATGCTGTAACTGTAAAAG
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TACTTTTATTGTCTGCTAAGAATACTACTA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	ATTGTACAAATTCCAAGTAACTCATCATTA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TTTTTCACGTTTGTACTGTCTCTCCTCGTA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TAACTTTAGATACTGCTAAAGAATTAGCAA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TGTCTGAATGTAGTTAATATCTTCAACTTG
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	CTTCAGTTTCACCTGTGAATACGCCGTTTA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	GCGCTTCAGTTTCAGCATTGGTCTTCTTAG
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TCTCTTGCATTTGGTTCTGAATAATCTCGTA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	AGAGCAATGTAGTCATTCAGCCAATGCCCT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	ATATGGGGGCTTATTGTATGGCTAATATAC
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	ACGGGGCATTTAATGTTGGCAAGCGCAATT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TCCTCAGATAAGGTTTAGTACGCAAGACTC
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TCCACTTCGACGCTGGACGGGCTCTCCTCA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	CAATGCTTGGGGCTATGATGGCATGGATAA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	CTCTTTTCGATATTCCGGAAGAGGTACTCC
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	CTTTTGTGTCTTCGGTAGCTTTGTCCATTA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	CCAGAGTCGCTTTTTCTTCCGGCCAGTCTG
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	GTGTGTTATCTATTTGTAGCGTGGGTGTAT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	ATATACAATGTCTAAGCTTAATCTTTCGGT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	GAAATAATATTGATAATATCGCTCTTGCTA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	AGTATTTATTATCTCTATTACTTTTGTATA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	CGTATTCAAAAGTATATCCGCTAGCCTCAA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TAGGTTTAGGGAGTAAATTAGCTCCTTTGG
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	GGTAAAACAAGCATCGGCGAAGCAGTAACA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TCCTAAATCTGAAAACAAAAACTACGAGTT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TATTGGTGCCGCGATTAAAGTGTTTGACTT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	AAAGCAATAAATCAGATCATAAAGGAGCCT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	CGACGGAAAAATTAGACGACGCTAATGTGC
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	GGGCAACGATATTTGTAGATAACAGGGAGT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TACGATGTTAAGCGGTGGAGTAGATCAGTA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TATAGTCTGTTTTTTCGTAAGTGAGCAGCGC
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TTGGGCAAAATGACCGTAATAAATCCATTC
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TTAGCACTTATATAGAAGCCCCGCCCCTAC
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	AGTGATGGGGAAGAGATTGAACTTATGTTT
GTTTTAGAGCTATATTATTCTGAATATCAACACACA

>NZ_FFHB01000002|2|1|510488-510721|PILER-CR
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	CATATAGATGTTTCCTTTCTACTCGTATAT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	AAATATTATTCAATGCTGTAACTGTAAAAG
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TACTTTTATTGTCTGCTAAGAATACTACTA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACATTGTACAAATTCCAAGTAACTCATCATTAGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACTTTTTCACGTTTGTACTGTCTCTCCTCGTAGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACTAACTTTAGATACTGCTAAAGAATTAGCAAGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACTGTCTGAATGTAGTTAATATCTTCAACTTGGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACCTTCAGTTTCACCTGTGAATACGCCGTTTAGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACGCGCTTCAGTTTCAGCATTGGTCTTCTTAGGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACTCTCTTGCATTTGGTTCTGAATAATCTCGTAGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACAGAGCAATGTAGTCATTCAGCCAATGCCCTGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACATATGGGGGCTTATTGTATGGCTAATATACGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACACGGGGCATTTAATGTTGGCAAGCGCAATTGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACTCCTCAGATAAGGTTTAGTACGCAAGACTCGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACTCCACTTCGACGCTGGACGGGCTCTCCTCAGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACCAATGCTTGGGGCTATGATGGCATGGATAAGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACCTCTTTTCGATATTCCGGAAGAGGTACTCCGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACCTTTTGTGTCTTCGGTAGCTTTGTCCATTAGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACCCAGAGTCGCTTTTTCTTCCGGCCAGTCTGGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACGTGTGTTATCTATTTGTAGCGTGGGTGTATGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACATATACAATGTCTAAGCTTAATCTTTCGGTGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACGAAATAATATTGATAATATCGCTCTTGCTAGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACAGTATTTATTATCTCTATTACTTTTGTATAGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	CGTATTCAAAAGTATATCCGCTAGCCTCAA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TAGGTTTAGGGAGTAAATTAGCTCCTTTGG
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	GGTAAAACAAGCATCGGCGAAGCAGTAACA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TCCTAAATCTGAAAACAAAAACTACGAGTT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TATTGGTGCCGCGATTAAAGTGTTTGACTT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	AAAGCAATAAATCAGATCATAAAGGAGCCT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	CGACGGAAAAATTAGACGACGCTAATGTGC
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	GGGCAACGATATTTGTAGATAACAGGGAGT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TACGATGTTAAGCGGTGGAGTAGATCAGTA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TATAGTCTGTTTTTTCGTAAGTGAGCAGCGC
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TTGGGCAAAATGACCGTAATAAATCCATTC
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TTAGCACTTATATAGAAGCCCCGCCCCTAC


>NZ_FFHB01000002|2|2|512007-512835|PILER-CR
	CATATAGATGTTTCCTTTCTACTCGTATAT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	AAATATTATTCAATGCTGTAACTGTAAAAG
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TACTTTTATTGTCTGCTAAGAATACTACTA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACATTGTACAAATTCCAAGTAACTCATCATTAGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACTTTTTCACGTTTGTACTGTCTCTCCTCGTAGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACTAACTTTAGATACTGCTAAAGAATTAGCAAGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACTGTCTGAATGTAGTTAATATCTTCAACTTGGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACCTTCAGTTTCACCTGTGAATACGCCGTTTAGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACGCGCTTCAGTTTCAGCATTGGTCTTCTTAGGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACTCTCTTGCATTTGGTTCTGAATAATCTCGTAGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACAGAGCAATGTAGTCATTCAGCCAATGCCCTGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACATATGGGGGCTTATTGTATGGCTAATATACGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACACGGGGCATTTAATGTTGGCAAGCGCAATTGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACTCCTCAGATAAGGTTTAGTACGCAAGACTCGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACTCCACTTCGACGCTGGACGGGCTCTCCTCAGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACCAATGCTTGGGGCTATGATGGCATGGATAAGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACCTCTTTTCGATATTCCGGAAGAGGTACTCCGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACCTTTTGTGTCTTCGGTAGCTTTGTCCATTAGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACCCAGAGTCGCTTTTTCTTCCGGCCAGTCTGGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACGTGTGTTATCTATTTGTAGCGTGGGTGTATGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACATATACAATGTCTAAGCTTAATCTTTCGGTGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACGAAATAATATTGATAATATCGCTCTTGCTAGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACAGTATTTATTATCTCTATTACTTTTGTATAGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	CGTATTCAAAAGTATATCCGCTAGCCTCAA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TAGGTTTAGGGAGTAAATTAGCTCCTTTGG
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	GGTAAAACAAGCATCGGCGAAGCAGTAACA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TCCTAAATCTGAAAACAAAAACTACGAGTT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TATTGGTGCCGCGATTAAAGTGTTTGACTT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	AAAGCAATAAATCAGATCATAAAGGAGCCT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	CGACGGAAAAATTAGACGACGCTAATGTGC
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	GGGCAACGATATTTGTAGATAACAGGGAGT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TACGATGTTAAGCGGTGGAGTAGATCAGTA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TATAGTCTGTTTTTTCGTAAGTGAGCAGCGC
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TTGGGCAAAATGACCGTAATAAATCCATTC
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TTAGCACTTATATAGAAGCCCCGCCCCTAC
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_FFHB01000002.1\|WP_003723817.1\|529811_530282_+\|Rrf2-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224870
NZ_FFHB01000002.1\|WP_003727703.1\|502235_502673_+\|50S-ribosomal-protein-L13	unknown	unknown	gnl\|CDD\|181703
NZ_FFHB01000002.1\|WP_003730793.1\|515243_516770_-\|GW-domain-containing-glycosaminoglycan-binding-protein	unknown	unknown	gnl\|CDD\|224619
NZ_FFHB01000002.1\|WP_003730783.1\|501294_502041_+\|tRNA-pseudouridine(38-40)-synthase-TruA	unknown	unknown	gnl\|CDD\|234577
NZ_FFHB01000002.1\|WP_003730794.1\|517038_518067_+\|Mrp/NBP35-family-ATP-binding-protein	unknown	unknown	gnl\|CDD\|378455
NZ_FFHB01000002.1\|WP_061729894.1\|514354_515206_+\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381359
NZ_FFHB01000002.1\|WP_003727715.1\|527895_529419_-\|glutamate:gamma-aminobutyrate-antiporter	unknown	unknown	gnl\|CDD\|129988
NZ_FFHB01000002.1\|WP_003723648.1\|509167_509509_+\|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226043
NZ_FFHB01000002.1\|WP_003730786.1\|508304_509171_+\|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|187851
NZ_FFHB01000002.1\|WP_014930020.1\|524965_526480_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|311953
NZ_FFHB01000002.1\|WP_003733614.1\|500491_501289_+\|energy-coupling-factor-transporter-transmembrane-protein-EcfT	unknown	unknown	gnl\|CDD\|223692
NZ_FFHB01000002.1\|WP_003730785.1\|504299_508304_+\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	COG3513_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226044
NZ_FFHB01000002.1\|WP_003726075.1\|502694_503087_+\|30S-ribosomal-protein-S9	unknown	unknown	gnl\|CDD\|178888
NZ_FFHB01000002.1\|WP_003730784.1\|503310_503790_+\|hypothetical-protein	unknown	unknown	unknown
NZ_FFHB01000002.1\|WP_003730851.1\|530315_533099_+\|YhgE/Pip-domain-containing-protein	unknown	unknown	gnl\|CDD\|224428
NZ_FFHB01000002.1\|WP_003726061.1\|513910_514333_+\|MerR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|133384
NZ_FFHB01000002.1\|WP_003730791.1\|513426_513789_+\|hypothetical-protein	unknown	unknown	unknown
NZ_FFHB01000002.1\|WP_003730787.1\|509498_510161_+\|type-II-A-CRISPR-associated-protein-Csn2	csn2	cd09758_csn2_CAS-II-A	gnl\|CDD\|213408
NZ_FFHB01000002.1\|WP_003730850.1\|526488_527883_-\|glutamate-decarboxylase	unknown	unknown	gnl\|CDD\|130848
NZ_FFHB01000002.1\|WP_003728531.1\|499622_500489_+\|energy-coupling-factor-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|237454

Protein	Function_ID	Function_description	E-value
NZ_FFHB01000002.1\|WP_003723817.1\|529811_530282_+\|Rrf2-family-transcriptional-regulator	gnl\|CDD\|224870	COG1959, COG1959, Predicted transcriptional regulator [Transcription].	1.22073e-37
NZ_FFHB01000002.1\|WP_003730850.1\|526488_527883_-\|glutamate-decarboxylase	gnl\|CDD\|130848	TIGR01788, Glutamate_decarboxylase_alpha_GAD-alpha., glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).	0
NZ_FFHB01000002.1\|WP_003730793.1\|515243_516770_-\|GW-domain-containing-glycosaminoglycan-binding-protein	gnl\|CDD\|224619	COG1705, FlgJ, Muramidase (flagellum-specific) [Cell motility and secretion / Intracellular trafficking and secretion].	9.48061e-69
NZ_FFHB01000002.1\|WP_003730783.1\|501294_502041_+\|tRNA-pseudouridine(38-40)-synthase-TruA	gnl\|CDD\|234577	PRK00021, truA, tRNA pseudouridine(38-40) synthase TruA.	3.89524e-129
NZ_FFHB01000002.1\|WP_003723648.1\|509167_509509_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	2.60762e-45
NZ_FFHB01000002.1\|WP_003727715.1\|527895_529419_-\|glutamate:gamma-aminobutyrate-antiporter	gnl\|CDD\|129988	TIGR00910, Glutamate/gamma-aminobutyrate_antiporter, glutamate:gamma-aminobutyrate antiporter. Lowered cutoffs from 1000/500 to 800/300, promoted from subfamily to equivalog, and put into a Genome Property DHH 9/1/2009 [Transport and binding proteins, Amino acids, peptides and amines].	0
NZ_FFHB01000002.1\|WP_061729894.1\|514354_515206_+\|aldo/keto-reductase	gnl\|CDD\|381359	cd19133, AKR_AKR5F1, the AKR5F family of aldo-keto reductase (AKR). Klebsiella sp. 2,5-diketo-D-gluconic acid reductase (2,5-DKG reductase) is a founding member of aldo-keto reductase family 5 member F1 (AKR5F1). It catalyzes the reduction of 2,5-diketo-D-gluconic acid (25DKG) to 2-keto-L-gulonic acid (2KLG).	1.48017e-169
NZ_FFHB01000002.1\|WP_003730786.1\|508304_509171_+\|type-II-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|187851	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer intergration. Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	2.30636e-135
NZ_FFHB01000002.1\|WP_014930020.1\|524965_526480_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|311953	pfam08280, HTH_Mga, M protein trans-acting positive regulator (MGA) HTH domain. Mga is a DNA-binding protein that activates the expression of several important virulence genes in group A streptococcus in response to changing environmental conditions.	3.49601e-13
NZ_FFHB01000002.1\|WP_003733614.1\|500491_501289_+\|energy-coupling-factor-transporter-transmembrane-protein-EcfT	gnl\|CDD\|223692	COG0619, CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters [Inorganic ion transport and metabolism].	4.31169e-53
NZ_FFHB01000002.1\|WP_003730785.1\|504299_508304_+\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	gnl\|CDD\|226044	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms].	0
NZ_FFHB01000002.1\|WP_003726075.1\|502694_503087_+\|30S-ribosomal-protein-S9	gnl\|CDD\|178888	PRK00132, rpsI, 30S ribosomal protein S9; Reviewed.	3.78102e-86
NZ_FFHB01000002.1\|WP_003730794.1\|517038_518067_+\|Mrp/NBP35-family-ATP-binding-protein	gnl\|CDD\|378455	pfam10609, ParA, NUBPL iron-transfer P-loop NTPase. This family contains ATPases involved in plasmid partitioning. It also contains the cytosolic Fe-S cluster assembling factor NBP35 which is required for biogenesis and export of both ribosomal subunits.	2.79554e-114
NZ_FFHB01000002.1\|WP_003730851.1\|530315_533099_+\|YhgE/Pip-domain-containing-protein	gnl\|CDD\|224428	COG1511, COG1511, Predicted membrane protein [Function unknown].	0
NZ_FFHB01000002.1\|WP_003726061.1\|513910_514333_+\|MerR-family-transcriptional-regulator	gnl\|CDD\|133384	cd01109, HTH_YyaN, Helix-Turn-Helix DNA binding domain of the MerR-like transcription regulators YyaN and YraB. Putative helix-turn-helix (HTH) MerR-like transcription regulators of Bacillus subtilis, YyaN and YraB, and related proteins; N-terminal domain. Based on sequence similarity, these proteins are predicted to function as transcription regulators that mediate responses to stress in eubacteria. They belong to the MerR superfamily of transcription regulators that promote transcription of various stress regulons by reconfiguring the operator sequence located between the -35 and -10 promoter elements. A typical MerR regulator is comprised of distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their N-terminal domains are homologous and contain a DNA-binding winged HTH motif, while the C-terminal domains are often dissimilar and bind specific coactivator molecules such as metal ions, drugs, and organic substrates.	4.55324e-42
NZ_FFHB01000002.1\|WP_003727703.1\|502235_502673_+\|50S-ribosomal-protein-L13	gnl\|CDD\|181703	PRK09216, rplM, 50S ribosomal protein L13; Reviewed.	2.08607e-102
NZ_FFHB01000002.1\|WP_003730787.1\|509498_510161_+\|type-II-A-CRISPR-associated-protein-Csn2	gnl\|CDD\|213408	cd09758, Csn2, CRISPR/Cas system-associated protein Csn2. Csn2 is a Nmeni subtype-specific Cas protein, which may function in the adaptation process which mediates the incorporation of foreign nucleic acids into the microbial host genome. Csn 2 may interact directly with double-stranded DNA. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA. Csn2 has been predicted to be a functional analog of Cas4 based on anti-correlated phyletic patterns; also known as SPy1049 family.	5.80993e-114
NZ_FFHB01000002.1\|WP_003728531.1\|499622_500489_+\|energy-coupling-factor-ABC-transporter-ATP-binding-protein	gnl\|CDD\|237454	PRK13634, cbiO, cobalt transporter ATP-binding subunit; Provisional.	0

>NZ_FFHB01000002.1|WP_003730787.1|509498_510161_+|type-II-A-CRISPR-associated-protein-Csn2
MNFNFKLLDDPIQIEDSTIFVIEDVRVFANVTKFFYQYEETEELTIFDAKHQPLKSSELMLITDVLGHDINSAATLKLIYADLEQQLNEKPEVKSMIDKLTATISELIGYELLEHELDLEEDEITVIELFKALGIKIETKSDTVFEKLIEIVQVYKYLSKKKLLVLINVCSYLTEEELLELRQYISLYQVKVLFIEPRKIKGSPQVTLDSDYFLHVENSV
>NZ_FFHB01000002.1|WP_003723648.1|509167_509509_+|CRISPR-associated-endonuclease-Cas2
MSYRYMRMLLMFDMPTDTAKERKAYRQFRRFILSEGFIMHQYSVYSKILLNGTASKAMLARLKQQNPKKGLITLLTVTEKQFARMVYLSGEQNKSIGNSDARLVFLGDDADEF
>NZ_FFHB01000002.1|WP_003730786.1|508304_509171_+|type-II-CRISPR-associated-endonuclease-Cas1
MGWRTVVVNSHSKLSYKNQHLVFKSTYQQEMIHLSEIDVLILETTDITLTTMLINCLVAENILILFCDDKRLPIGKVLPFYGRHDSSLQLTKQLEWDAELKAAVWTEIISQKILNQSTYLSMLNYDEKASSLINLHEALAVFDPTNREGHAARIYFNQLFGNDFTREQENDINSGLNYGYTLLLSIFARELVKSGCMTQFGLKHANQFNDFNLASDLMEPFRPLVDQIVYEKRNEDFQVIKRSLFELFTKQFDYNDQHMFLTNIASDYTKKIVKVLNEEREGVPEFRI
>NZ_FFHB01000002.1|WP_003730785.1|504299_508304_+|type-II-CRISPR-RNA-guided-endonuclease-Cas9
MKNPYTIGLDIGTNSVGWAVLTDQYDLVKRKMKVAGNSDKKQIKKNFWGVRLFDDGQTAVDRRMNRTARRRIERRRNRISYLQEIFAVEMANIDANFFCRLNDSFYVDSEKRNSRHPFFATIEEEVAYHKNYRTIYHLREELVNSSEKADLRLVYLALAHIIKYRGNFLIEGALDTKNTSVDEVYKQFIQTYNQVFMSNIEEGALAKVEENTEVASILAGKFTRREKFERILRLYPGEKSTGMFAQFISLIVGNKGNFQKVFNLVEKTDIECAKDSYEEDLEALLAIIGDEYAELFVAAKNTYNAVVLSSIITVTATETNAKLSASMIERFDAHEKELGELKAFIKLHLPKQYQEIFNNAEIDGYAGYIDGKTKQVDFYKYLKTTLENVEGADYFITKIEEENFLRKQRTFDNGVIPHQLHLEELEAILHQQAKYYPFLREGYDKIKSLVTFRIPYFVGPLANGQSEFAWLTRKDDGEIRPWNIEEKVDFGKSAVDFIEKMTNKDTYLPKENVLPKHSLCYQKYMVYNELTKIRYIDDQGKTNYFSGREKQQIFNDLFKQKRKVKKKDLELFLRNINHIESPTIEGLEDSFNASYATYHDLLKVGLKQEILDNPLNTEILEDIVKILTVFEDKRMIKEQLEQFSDVLDGVVLKKLERRHYTGWGRLSAKLLVGIRDKQSHLTILDYLMNDDGLNRNLMQLINDSNLSFKSIIEKEQVSTTDKDLQSIVADLAGSPAIKKGILQSLKIVDELVSIMGYPPQTIVVEMARENQTTGKGKNNSKPRYKSLEKAIKDFGSQILKEHPTDNQELKNNRLYLYYLQNGKDIYTGQELDIHNLSNYDIDHIVPQSFITDNSIDNLVLTSSAGNREKGGDVPPLEIVRKRKVFWEKLYQGNLMSKRKFDYLTKAERGGLTEADKARFIHRQLVETRQITKNVANILHQRFNKETDNHGNTMEQVRIVTLKSALVSQFRKQFQLYKVREVNDYHHAHDAYLNGVVANTLLKVYPQLEPEFVYGEYHQFDWFKANKATAKKQFYTNIMLFFAQKERIIDENGEILWDKKYLETIKKVLDYRQINIVKKTEIQKGEFSKATIKPKGNSSKLIPRKENWDPVKYGGLDSPNMAYAVIIEHAKGKKKIVIEKKLIQINIMERKMFEKDEEAFLEEKGYHQPKVLTKLPKYTLYECEKGRRRMLSSANEAQKGNQLVLSNHLVSLLYHAKNCEASDGKSLKYIEAHRETFSELLAQVSEFATKYTLADANLSKINNLFEQNKEGDIKAIAQSFVDLMAFNAMGAPASFKFFEATIDRKRYTNLKELLSSTIIYQSITGLYESRKRLDD
>NZ_FFHB01000002.1|WP_003730784.1|503310_503790_+|hypothetical-protein
MKGLIINKMHSGYFTNMSEVFNLLPEEELNCMWLVSSYECNIYPFEQIPFEKEYVWMKGTELKEILNQEEVMFIWGNFTSYPSNTKLKDILKYPIPFADGNSDLWKKDVHLSNPLSNTELISWDGSIFLTLSKNTTLIEGLKDDYPDSEDLSTYNSDID
>NZ_FFHB01000002.1|WP_003726075.1|502694_503087_+|30S-ribosomal-protein-S9
MAQVQYYGTGRRKSSVARVRLVPGDGKIVINNRDWEDYIPFAALREVIKQPLVATETLGNYDVLVNVHGGGYTGQAGAIRHGVARALLQVAPEYRPALKSAGLLTRDPRMKERKKYGLKGARRAPQFSKR
>NZ_FFHB01000002.1|WP_003727703.1|502235_502673_+|50S-ribosomal-protein-L13
MRTTYMAKPGEVERKWYVIDATGVSLGRLSSEVASILRGKNKPQFTPHIDTGDFVIIINAGKIGLTGKKATDKIYYRHSQYPGGLKSRTAGEMRTNNPEKLLELSIKGMLPKNSLGRQLFKKLHVYGGSEHEHAAQQPEVYELRG
>NZ_FFHB01000002.1|WP_003730783.1|501294_502041_+|tRNA-pseudouridine(38-40)-synthase-TruA
MTRYKAIISYDGSGFYGYQVQPNTRTVQAEIEKALTKMHKGKTVRITASGRTDTGVHAKGQVIHFDSELDITAEKFQKALQAMTPFDISFLTVEEVPDDFHARFGTVGKEYRYVVKRTKIFDPFSRNFALHYPYELDISKMKLASKRLIGEHDFTSFCSARTERDSKVRTLYSIDFYEEDDETLVIAFQGNGFLYNMVRILTGTLLDAGQGRISPDDISEALLARDRQKLISKTAPPQGLYLWRVDYE
>NZ_FFHB01000002.1|WP_003733614.1|500491_501289_+|energy-coupling-factor-transporter-transmembrane-protein-EcfT
MMDKMILGRYIPGNSWLHRIDPRAKITAVMAFIAIVFLANNWLTYALMFAYVLYLVLTSKVPFLFFIKGLQPIFWLILITLLLQVFFTKGGTVLVDLGLLQITTLGLTNGAMMFCRFVLIIFMTTLLTLTTSPIELTDGLEKILAPFRLVHLPVHELALMLSISLRFIPTLMDETEKILKAQKARGVEFTSGKWSDRIKAIIPLLVPLFISAFKRAEDLAIAMEARGYRGGKGRTRFRLLRWRFADTLLLISLVVLSGLLFWLRS
>NZ_FFHB01000002.1|WP_003728531.1|499622_500489_+|energy-coupling-factor-ABC-transporter-ATP-binding-protein
MEIKLEQLGYCYQKNSPFEKRALLDVNVSFDSGSYSAIIGHTGSGKSTLLQHLNALLMPTEGKITVGDREIVAGVKQKKLRDLRKKVGIVFQFPEAQLFEETVEKDICFGPMNFGVSEEDAKLRAKKVIYEVGLTEEILSRSPFELSGGQMRRVAIAGVLAMDPEVLVLDEPTAGLDPHGREEIMEMFYNLHKEKGLTTVLVTHSMEDAARYAEKIVLMKAGTVLQIGTPREIFAKPDELVDLGLSVPDVVRFQGLFERKFDVKLTKTCLTIDELTTEMAPYLAKGGA
>NZ_FFHB01000002.1|WP_003730791.1|513426_513789_+|hypothetical-protein
MKKTSIIFIFCALLLTACSTTTKEIPRQTTEATGTIEQVETESILIKNFKIKNDNNTPELSVRFHISEKYHDETGNKIKRTELNKNDNIKIILTKDFPIQETSPAQIDPKYIQKIILLNK
>NZ_FFHB01000002.1|WP_003726061.1|513910_514333_+|MerR-family-transcriptional-regulator
MNIKQAADMFGLTVDTLRYYERVGVIPPVHRNESGYRDYKTSDLNWVYLVKNLRNAGLSVESLIEFATLAQLRETQNVEAAQKQVLVDQLKELDEKLAEMKKVRELLVYKIDSYDSHIAQFKAGELNADNVEKLWKRDKF
>NZ_FFHB01000002.1|WP_061729894.1|514354_515206_+|aldo/keto-reductase
MKTVKLNNGVEVPILGFGTYQITDAAEAEQAVKDAIKTSYRHIDTAQSYMNEEAVGRGIVASGVDRKELFITTKIWVENVSYKGVMSSFDRSLKRLGLDYIDLLLIHQPFNDVYGAWIAMEELQASGKIRAIGVSNFSPDRVIDLAAFNEVTPQVNQIEVNPFQQQAANLAVLRKEGVAIEAWAPFAEGKNDIFNNPVLTKIGAKYGKSAAQVILRWLVEQDIIVLAKSVKPERMAQNLAIFDFELTEADKGEIASLDQGESQFFSHADPEMVKWMASRKLNV
>NZ_FFHB01000002.1|WP_003730793.1|515243_516770_-|GW-domain-containing-glycosaminoglycan-binding-protein
MDRKFIKPGIILLIVAFLVVSINVGAETGGSRTGQVNLTTSQQAFIDEILPAAQDGYRDGKLLTSVTLAQAILESNWGESGLSQNSNNLFGIKGTYKGESVSMGTMEASGSTTANFRVYPSWKESIEDHTALITENARYQDAVGETNYRKALQAIKDGGYATDPDYVSKLVAIIERYNLDKYDVIYDKIESNQSLAAIGTVAENKEQEVIWSAPYNTENANKIGTLENYLGRNLEISWEAKTEKGLWYFIRENNKDIGWINSNALKISYHQKEDENVHLTKYVDDLSAHVYRLPSPEKQFDNGTIAKYDRKALEVDKKITRGGYAWFRISEGEKVIGWVRADKLNDRLYDRITEQTSYDGYALVSKSATDNVWTAPFNTKNAEKLAPLADYDNEKLELVTRAKAGNTLWYQFKVDGKLVGWASEKDLNVFYTPAKEEPVKQVAYVKDPTAKLYNKPVESTSTNPKAVGFYYGKLLAVDKTATILGEDWLHLKDRQNSLGWIKAIDINS
>NZ_FFHB01000002.1|WP_003730794.1|517038_518067_+|Mrp/NBP35-family-ATP-binding-protein
MLNEQQITRLLYRLQDPVLEASLEETEGVLEVQVLEETANIKIALADPAVETDHFVHNIEELLTQFGVNEINIELEYLPAAVIDRIFQARDNILSEASETKFLAIASGKGGVGKSTVSANLAIALAQQGKKVGLLDADIYGFSIPVLLGTTESPRKENGQIIPVETHGIQMISMDFFVEQGEPVIWRGPMLGKMIKMFLEEVRWGKLDYLLIDLPPGTGDVALDIHTLIPKCNELIVTTPHYAAASVASRAGYMAAKNNHKIIGVIENMSYLTLADGQVLKVFGQGGGEKVAADLETQLLIQLPIEQPEPNGNGYVSAIFNSSSTSGKAYKTLAEKIIPYLS
>NZ_FFHB01000002.1|WP_014930020.1|524965_526480_+|helix-turn-helix-domain-containing-protein
MLTNYIEKDIKRKCLICDFLLKNKHTNLDEIAEYMETSRVTVRSDIHALNEELDGLIVIQMKECVDNWVYQCRLQNGATERKVLYKLYDNSMFLKCVAFFVTNVEERKFTDFMDTYFISHSHAYRLKHKVEAFLREIDLTLDNNRITGKEYRVRYLIALLQAEYGVLIYPLLDEEKQMIDDFMATLNLRINIDTLAHNAEGHAYSRSLISMVFKRDIPTSAIILDEQCQKYIESSSFLAMVRKSSKETLEKELGQEFSYNDYLYLMLIYYSTNFSIIDASMKKVELEQFNELIMKNADLQVLIDLFEEYFGPEVVNHSLFRAALCYFLKKTLFNLQGLIPSNERLLDKKYEPLYMVVKNVLERWNEASEYRVLLIDSHINYLTIHLYPLIYKWNNPVQICIFSFNLINFESCKFQVEQELGRKVTVHETMFNSVEELNQVLAESSEPTIVLCHPNCEMELKEAVDGMIIPISLAFFDRDLVDVERAIQSLRIKEHEKRLAYLRG
>NZ_FFHB01000002.1|WP_003730850.1|526488_527883_-|glutamate-decarboxylase
MLYSKENKESYLEPVFGSSAEDRDIPKYTLGKEPLEPRIAYRLVKDELLDEGSARQNLATFCQTYMEDEATKLMSETLEKNAIDKSEYPRTAELENRCVNIIADLWHAPKNQKFMGTSTIGSSEACMLGGMAMKFAWRKRAEKLGLDIYAQKPNLVISSGYQVCWEKFCVYWDIDMRVVPMDKDHMQLNTDQVLDYVDEYTIGVVGILGITYTGRYDDIYALNEKLEEYNSKTDYKVYIHVDAASGGFFTPFVEPDIIWDFRLKNVISINTSGHKYGLVYPGIGWVLWKDESYLPEELIFKVSYLGGEMPTMQINFSRSASHIIGQYYNFLRYGFEGYRTIHQKTSDVAQYLAHAVEQTGYFDIYNDGSHLPIVCYKLKDDANVKWTLYDLADRLQMRGWQVPAYPLPKNLENIIIQRYVCRADLGFNMAEEFIQDFQASIQELNNAHILFHDNQQSGVHGFTH
>NZ_FFHB01000002.1|WP_003727715.1|527895_529419_-|glutamate:gamma-aminobutyrate-antiporter
MSKQAKSLTLFGFFAITASMVMTVYEYPTFATSGFHLVFFLLLGGFLWFLPVALCAAEMATVDGWQEGGIFSWVGNTLGERFGFAAIFFQWFQITVGFVTMIYFILGALSYVFDFPALESNPFIKFIGVLIIFWGLTFSQLGGTKNTAKIAKFGFIIGILIPAIILFILGIAYVAGGNPLHVTFSKEAFIPDFSKASTLVIFVSFILAYMGVEASASHVNEMTNPKRDYPLAMIMLVILAIALNTIGGLTISAVLPLKDLSLSSGVVQTFQALILHFGSGLGWAVKLIAIMIALGVMGEVSAWVVGPSRGMYTAAEQGLLPEKMKKVNKHGVPVPLIMVQGVVVTIWAAILTFGGGGNNLSFLTAISLTVVIYLVGYLLFFIGYLVLIFKKSSLKRTYQIPGGKIVKVIVALIGLVTSVFALCISFVPPASIAAKSDTTYMVILSISFIVTVLIPFIIYAVHDKKDISPKDITHLESSDINKFTHPRARGEHIINPDEKHIMNQDKL
>NZ_FFHB01000002.1|WP_003723817.1|529811_530282_+|Rrf2-family-transcriptional-regulator
MKLSKSMDQVFCIMTMLYTQKVDVPISSVTIHHRLRDSSPSYISKILRKLVVSGLINSVSGNNGGFTLAKDPEEINLLDIVEAVEGKIDTYPDSDLIHTVFSDYHEFAESGIHTITSAFRNADKEYANYLYSQKLSVLVEQVIGKERTTIIDWNEA
>NZ_FFHB01000002.1|WP_003730851.1|530315_533099_+|YhgE/Pip-domain-containing-protein
MDMVKNEWKKLFKNKILLLSFVVILFIPLLYASFFLKSVWDPYGKTGDLPVAVVNNDKPVDYNGQTMDVGDQLVTKLKSNKELDWNFLSKEDAEQGLKDGKYYMIVTIPKDFSKNAASVLDKDPKKMELSYKTNGSLNYLGQVVSEQGAKQLKSEVSAEVTKSYAEAIFDKIKESGEGFAQAADGSGKIKDGLVKSQEGNKTISTNLKTLADSSLTFKDGANTLEVGLKTYTDGVNTAAAGGDKLNDGVSTLAAGVGPLKDGVAALDGGATKLASGVSTYTSGVDTLAGGINQAYTGSTALSDGLNKMNGSVPTLASGITQLNNGQKSLATGLDSLVDGSNKLSAGLKELDGNLTDKQGKIAQLKQGMNDLQQGIDQLNKSVNGEDAALAKQLAALQKSLSDLQNGLTFIKSNANFDAEAIKSKINATAGVSAEDKQKIIDAIQADLDKETQKSATQVATVEQLQSGLSGLDLAAIQTQVTELQTGVAKISAGYQAVHGGTNEAFNSIHQAINGSGSQTLLGGANQLTAGLKSAQAGNAKLVAGTNQLNNQVPTLTSGVGQLAAGSANMENGLSQLNDGGNQLASNSGALRSGATELQGGTNQLAAKVPTLAGGVNQLQAGSSQLAGGLNQLSANSPKLVSGVGQLADGSSKIADGSSKLANGSFQLGDGLTKLTDGSTELTDKLADGAQQVKDTKATDKTFNMIAAPTKLAHNEYTHVSNYGHALAPYVLSLALYVGALVFNFIMPIRRVSMEGQPAYKWWLSKLSLGFVAAVAMALLEGGIMIALGLRPDSIVEFFGTAIITALAYMFLIMLLAMTFDNPGRFIAMVLLIVQLAGSGGTFPMPLTGWFFNLIHPFLPMTYSIYAFRESLAAGMGPNVYSMSMLVLTIIMIACVGLLYLSMSHLKKRHDAHESALDDNQKLMALEN

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_FFHB01000002_2	2.10\|510920\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	510920-510949	30	NZ_FFHB01000004.1	15581-15610	2	0.933

1. spacer 2.10|510920|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to position: 15581-15610, mismatch: 2, identity: 0.933

tgtctgaatgtagttaatatcttcaacttg	CRISPR spacer
tgtctgaatgtagtttatatcttcaatttg	Protospacer
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MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_FFHB01000002_2	2.2\|510392\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	510392-510421	30	MH299806	Listeria phage LP-KV022, complete genome	52817-52846	0	1.0
NZ_FFHB01000002_2	2.2\|510392\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	510392-510421	30	MN114083	Listeria phage LP-013, complete genome	48513-48542	0	1.0
NZ_FFHB01000002_2	2.2\|510392\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	510392-510421	30	NC_021785	Listeria phage LP-110, complete genome	10535-10564	0	1.0
NZ_FFHB01000002_2	2.2\|510392\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	510392-510421	30	KJ094026	Listeria phage LP-032 contig 3, partial genome	10007-10036	0	1.0
NZ_FFHB01000002_2	2.2\|510392\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	510392-510421	30	MN128593	Listeria phage LP-031, complete genome	47633-47662	0	1.0
NZ_FFHB01000002_2	2.2\|510392\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	510392-510421	30	NC_021787	Listeria phage LP-037, complete genome	5014-5043	0	1.0
NZ_FFHB01000002_2	2.2\|510392\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	510392-510421	30	JX442241	Listeria phage P70, complete genome	54951-54980	0	1.0
NZ_FFHB01000002_2	2.2\|510392\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	510392-510421	30	KJ094020	Listeria phage LP-026, complete genome	31166-31195	0	1.0
NZ_FFHB01000002_2	2.2\|510392\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	510392-510421	30	KJ094021	Listeria phage LP-114, complete genome	38339-38368	0	1.0
NZ_FFHB01000002_2	2.2\|510392\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	510392-510421	30	MN114082	Listeria phage LP-010, complete genome	47798-47827	0	1.0
NZ_FFHB01000002_2	2.6\|510656\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT,PILER-CR	510656-510685	30	MT438761	Listeria virus P61, complete genome	7010-7039	0	1.0
NZ_FFHB01000002_2	2.6\|510656\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT,PILER-CR	510656-510685	30	MT668624	Listeria phage LP-Mix_6.2, complete genome	131100-131129	0	1.0
NZ_FFHB01000002_2	2.6\|510656\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT,PILER-CR	510656-510685	30	KJ668718	Listeria phage LMTA-34 hypothetical proteins and DNA modification protein genes, complete cds	1258-1287	0	1.0
NZ_FFHB01000002_2	2.6\|510656\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT,PILER-CR	510656-510685	30	MT178766	Listeria virus P100plus, complete genome	96120-96149	0	1.0
NZ_FFHB01000002_2	2.6\|510656\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT,PILER-CR	510656-510685	30	NC_047872	Listeria phage LMTA-94, complete genome	2498-2527	0	1.0
NZ_FFHB01000002_2	2.6\|510656\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT,PILER-CR	510656-510685	30	MT178767	Listeria virus P200, complete genome	96121-96150	0	1.0
NZ_FFHB01000002_2	2.6\|510656\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT,PILER-CR	510656-510685	30	KJ591605	Listeria phage LMTA-57, complete genome	12879-12908	0	1.0
NZ_FFHB01000002_2	2.6\|510656\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT,PILER-CR	510656-510685	30	MN128594	Listeria phage LP-066, complete genome	131590-131619	0	1.0
NZ_FFHB01000002_2	2.6\|510656\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT,PILER-CR	510656-510685	30	NC_042048	Listeria phage LMTA-34, complete genome	8562-8591	0	1.0
NZ_FFHB01000002_2	2.6\|510656\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT,PILER-CR	510656-510685	30	MK792752	UNVERIFIED: Listera phage vB-LmoM-SH3-3, complete genome	6613-6642	0	1.0
NZ_FFHB01000002_2	2.6\|510656\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT,PILER-CR	510656-510685	30	NC_041862	Listeria phage LP-064, complete genome	3914-3943	0	1.0
NZ_FFHB01000002_2	2.6\|510656\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT,PILER-CR	510656-510685	30	KJ094030	Listeria phage LP-083-2, complete genome	981-1010	0	1.0
NZ_FFHB01000002_2	2.6\|510656\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT,PILER-CR	510656-510685	30	JX126918	Listeria phage LP-125, complete genome	3914-3943	0	1.0
NZ_FFHB01000002_2	2.6\|510656\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT,PILER-CR	510656-510685	30	NC_024360	Listeria phage LMSP-25, complete genome	8562-8591	0	1.0
NZ_FFHB01000002_2	2.6\|510656\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT,PILER-CR	510656-510685	30	JQ797329	Listeria phage vB_LmoM_AG20, complete genome	129717-129746	0	1.0
NZ_FFHB01000002_2	2.6\|510656\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT,PILER-CR	510656-510685	30	KJ094031	Listeria phage LP-124, complete genome	98866-98895	0	1.0
NZ_FFHB01000002_2	2.7\|510722\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	510722-510751	30	DQ003638	Listeria phage A511, complete genome	129539-129568	0	1.0
NZ_FFHB01000002_2	2.9\|510854\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	510854-510883	30	DQ003637	Listeria phage A500, complete genome	28012-28041	0	1.0
NZ_FFHB01000002_2	2.10\|510920\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	510920-510949	30	DQ003637	Listeria phage A500, complete genome	37232-37261	0	1.0
NZ_FFHB01000002_2	2.10\|510920\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	510920-510949	30	KJ094022	Listeria phage LP-030-3, complete genome	6787-6816	0	1.0
NZ_FFHB01000002_2	2.11\|510986\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	510986-511015	30	MH341453	Listeria phage PSU-VKH-LP041, complete genome	12781-12810	0	1.0
NZ_FFHB01000002_2	2.11\|510986\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	510986-511015	30	NC_009813	Listeria phage B054, complete genome	12781-12810	0	1.0
NZ_FFHB01000002_2	2.18\|511449\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511449-511478	30	MH341452	Listeria phage PSU-VKH-LP040, complete genome	8193-8222	0	1.0
NZ_FFHB01000002_2	2.18\|511449\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511449-511478	30	KJ094022	Listeria phage LP-030-3, complete genome	16573-16602	0	1.0
NZ_FFHB01000002_2	2.18\|511449\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511449-511478	30	KP399678	Listeria phage vB_LmoS_293, complete genome	8180-8209	0	1.0
NZ_FFHB01000002_2	2.26\|511977\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511977-512006	30	MT438761	Listeria virus P61, complete genome	11622-11651	0	1.0
NZ_FFHB01000002_2	2.26\|511977\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511977-512006	30	NC_047872	Listeria phage LMTA-94, complete genome	132605-132634	0	1.0
NZ_FFHB01000002_2	2.26\|511977\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511977-512006	30	DQ003638	Listeria phage A511, complete genome	1407-1436	0	1.0
NZ_FFHB01000002_2	2.26\|511977\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511977-512006	30	DQ003638	Listeria phage A511, complete genome	135901-135930	0	1.0
NZ_FFHB01000002_2	2.26\|511977\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511977-512006	30	KJ591604	Listeria phage LMTA-148, complete genome	9938-9967	0	1.0
NZ_FFHB01000002_2	2.26\|511977\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511977-512006	30	KJ591605	Listeria phage LMTA-57, complete genome	6420-6449	0	1.0
NZ_FFHB01000002_2	2.26\|511977\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511977-512006	30	MN128594	Listeria phage LP-066, complete genome	1223-1252	0	1.0
NZ_FFHB01000002_2	2.26\|511977\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511977-512006	30	MN128594	Listeria phage LP-066, complete genome	137013-137042	0	1.0
NZ_FFHB01000002_2	2.26\|511977\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511977-512006	30	NC_042048	Listeria phage LMTA-34, complete genome	15008-15037	0	1.0
NZ_FFHB01000002_2	2.26\|511977\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511977-512006	30	NC_041862	Listeria phage LP-064, complete genome	9612-9641	0	1.0
NZ_FFHB01000002_2	2.26\|511977\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511977-512006	30	KJ094030	Listeria phage LP-083-2, complete genome	6404-6433	0	1.0
NZ_FFHB01000002_2	2.26\|511977\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511977-512006	30	JX126918	Listeria phage LP-125, complete genome	9612-9641	0	1.0
NZ_FFHB01000002_2	2.26\|511977\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511977-512006	30	NC_024360	Listeria phage LMSP-25, complete genome	15008-15037	0	1.0
NZ_FFHB01000002_2	2.26\|511977\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511977-512006	30	KJ535721	Listeria phage List-36, complete genome	128990-129019	0	1.0
NZ_FFHB01000002_2	2.26\|511977\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511977-512006	30	KJ094031	Listeria phage LP-124, complete genome	104289-104318	0	1.0
NZ_FFHB01000002_2	2.27\|512043\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT,PILER-CR	512043-512072	30	MN172529	Listeria phage LP-039, complete genome	132759-132788	0	1.0
NZ_FFHB01000002_2	2.27\|512043\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT,PILER-CR	512043-512072	30	MT438761	Listeria virus P61, complete genome	10099-10128	0	1.0
NZ_FFHB01000002_2	2.27\|512043\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT,PILER-CR	512043-512072	30	MT668624	Listeria phage LP-Mix_6.2, complete genome	135301-135330	0	1.0
NZ_FFHB01000002_2	2.27\|512043\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT,PILER-CR	512043-512072	30	KJ591604	Listeria phage LMTA-148, complete genome	8664-8693	0	1.0
NZ_FFHB01000002_2	2.27\|512043\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT,PILER-CR	512043-512072	30	KJ094033	Listeria phage LP-048, complete genome	2187-2216	0	1.0
NZ_FFHB01000002_2	2.27\|512043\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT,PILER-CR	512043-512072	30	NC_041862	Listeria phage LP-064, complete genome	8109-8138	0	1.0
NZ_FFHB01000002_2	2.27\|512043\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT,PILER-CR	512043-512072	30	JX126918	Listeria phage LP-125, complete genome	8109-8138	0	1.0
NZ_FFHB01000002_2	2.27\|512043\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT,PILER-CR	512043-512072	30	JQ797329	Listeria phage vB_LmoM_AG20, complete genome	132782-132811	0	1.0
NZ_FFHB01000002_2	2.27\|512043\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT,PILER-CR	512043-512072	30	KJ535721	Listeria phage List-36, complete genome	130430-130459	0	1.0
NZ_FFHB01000002_2	2.28\|512109\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT,PILER-CR	512109-512138	30	MH341451	Listeria phage PSU-VKH-LP019, complete genome	10709-10738	0	1.0
NZ_FFHB01000002_2	2.28\|512109\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT,PILER-CR	512109-512138	30	DQ003642	Listeria phage A006, complete genome	10725-10754	0	1.0
NZ_FFHB01000002_2	2.37\|512704\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT,PILER-CR	512704-512733	30	KJ094023	Listeria phage LP-101, complete genome	13151-13180	0	1.0
NZ_FFHB01000002_2	2.6\|510656\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT,PILER-CR	510656-510685	30	MN172529	Listeria phage LP-039, complete genome	129892-129921	1	0.967
NZ_FFHB01000002_2	2.6\|510656\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT,PILER-CR	510656-510685	30	NC_025440	Listeria phage WIL-1, complete genome	38247-38276	1	0.967
NZ_FFHB01000002_2	2.6\|510656\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT,PILER-CR	510656-510685	30	DQ003638	Listeria phage A511, complete genome	129021-129050	1	0.967
NZ_FFHB01000002_2	2.6\|510656\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT,PILER-CR	510656-510685	30	KJ591604	Listeria phage LMTA-148, complete genome	6287-6316	1	0.967
NZ_FFHB01000002_2	2.6\|510656\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT,PILER-CR	510656-510685	30	KJ094033	Listeria phage LP-048, complete genome	132349-132378	1	0.967
NZ_FFHB01000002_2	2.9\|510854\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	510854-510883	30	MH341452	Listeria phage PSU-VKH-LP040, complete genome	28407-28436	1	0.967
NZ_FFHB01000002_2	2.9\|510854\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	510854-510883	30	KJ094022	Listeria phage LP-030-3, complete genome	37396-37425	1	0.967
NZ_FFHB01000002_2	2.10\|510920\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	510920-510949	30	NC_003216	Listeria phage A118, complete genome	39285-39314	1	0.967
NZ_FFHB01000002_2	2.10\|510920\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	510920-510949	30	AJ242593	Bacteriophage A118 complete genome	39285-39314	1	0.967
NZ_FFHB01000002_2	2.10\|510920\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	510920-510949	30	DQ003642	Listeria phage A006, complete genome	36580-36609	1	0.967
NZ_FFHB01000002_2	2.18\|511449\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511449-511478	30	NC_003216	Listeria phage A118, complete genome	8179-8208	1	0.967
NZ_FFHB01000002_2	2.18\|511449\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511449-511478	30	AJ242593	Bacteriophage A118 complete genome	8179-8208	1	0.967
NZ_FFHB01000002_2	2.24\|511845\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511845-511874	30	KJ094023	Listeria phage LP-101, complete genome	43273-43302	1	0.967
NZ_FFHB01000002_2	2.26\|511977\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511977-512006	30	MT178766	Listeria virus P100plus, complete genome	101688-101717	1	0.967
NZ_FFHB01000002_2	2.26\|511977\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511977-512006	30	NC_025440	Listeria phage WIL-1, complete genome	31699-31728	1	0.967
NZ_FFHB01000002_2	2.26\|511977\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511977-512006	30	MT178767	Listeria virus P200, complete genome	101689-101718	1	0.967
NZ_FFHB01000002_2	2.26\|511977\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511977-512006	30	DQ004855	Listeria bacteriophage P100, complete genome	98043-98072	1	0.967
NZ_FFHB01000002_2	2.26\|511977\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511977-512006	30	JQ797329	Listeria phage vB_LmoM_AG20, complete genome	1229-1258	1	0.967
NZ_FFHB01000002_2	2.26\|511977\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511977-512006	30	KT319598	UNVERIFIED: Listeria phage WIL-2 genomic sequence	31421-31450	1	0.967
NZ_FFHB01000002_2	2.27\|512043\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT,PILER-CR	512043-512072	30	NC_047872	Listeria phage LMTA-94, complete genome	133951-133980	1	0.967
NZ_FFHB01000002_2	2.27\|512043\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT,PILER-CR	512043-512072	30	MK792752	UNVERIFIED: Listera phage vB-LmoM-SH3-3, complete genome	2670-2699	1	0.967
NZ_FFHB01000002_2	2.29\|512175\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT,PILER-CR	512175-512204	30	MH341451	Listeria phage PSU-VKH-LP019, complete genome	28776-28805	1	0.967
NZ_FFHB01000002_2	2.30\|512241\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT,PILER-CR	512241-512270	30	MT668624	Listeria phage LP-Mix_6.2, complete genome	132068-132097	1	0.967
NZ_FFHB01000002_2	2.30\|512241\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT,PILER-CR	512241-512270	30	MT178766	Listeria virus P100plus, complete genome	97088-97117	1	0.967
NZ_FFHB01000002_2	2.30\|512241\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT,PILER-CR	512241-512270	30	NC_025440	Listeria phage WIL-1, complete genome	37279-37308	1	0.967
NZ_FFHB01000002_2	2.30\|512241\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT,PILER-CR	512241-512270	30	NC_047872	Listeria phage LMTA-94, complete genome	1530-1559	1	0.967
NZ_FFHB01000002_2	2.30\|512241\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT,PILER-CR	512241-512270	30	DQ003638	Listeria phage A511, complete genome	129989-130018	1	0.967
NZ_FFHB01000002_2	2.30\|512241\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT,PILER-CR	512241-512270	30	MT178767	Listeria virus P200, complete genome	97089-97118	1	0.967
NZ_FFHB01000002_2	2.30\|512241\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT,PILER-CR	512241-512270	30	KJ591605	Listeria phage LMTA-57, complete genome	11911-11940	1	0.967
NZ_FFHB01000002_2	2.30\|512241\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT,PILER-CR	512241-512270	30	MN128594	Listeria phage LP-066, complete genome	132558-132587	1	0.967
NZ_FFHB01000002_2	2.30\|512241\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT,PILER-CR	512241-512270	30	NC_042048	Listeria phage LMTA-34, complete genome	9530-9559	1	0.967
NZ_FFHB01000002_2	2.30\|512241\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT,PILER-CR	512241-512270	30	MK792752	UNVERIFIED: Listera phage vB-LmoM-SH3-3, complete genome	5645-5674	1	0.967
NZ_FFHB01000002_2	2.30\|512241\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT,PILER-CR	512241-512270	30	NC_041862	Listeria phage LP-064, complete genome	4882-4911	1	0.967
NZ_FFHB01000002_2	2.30\|512241\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT,PILER-CR	512241-512270	30	KJ094030	Listeria phage LP-083-2, complete genome	1949-1978	1	0.967
NZ_FFHB01000002_2	2.30\|512241\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT,PILER-CR	512241-512270	30	JX126918	Listeria phage LP-125, complete genome	4882-4911	1	0.967
NZ_FFHB01000002_2	2.30\|512241\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT,PILER-CR	512241-512270	30	NC_024360	Listeria phage LMSP-25, complete genome	9530-9559	1	0.967
NZ_FFHB01000002_2	2.30\|512241\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT,PILER-CR	512241-512270	30	KJ094031	Listeria phage LP-124, complete genome	99834-99863	1	0.967
NZ_FFHB01000002_2	2.37\|512704\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT,PILER-CR	512704-512733	30	NZ_LR134403	Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence	222678-222707	1	0.967
NZ_FFHB01000002_2	2.2\|510392\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	510392-510421	30	MN904502	Listeria phage LP-018, complete genome	47792-47821	2	0.933
NZ_FFHB01000002_2	2.7\|510722\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	510722-510751	30	KJ668718	Listeria phage LMTA-34 hypothetical proteins and DNA modification protein genes, complete cds	1776-1805	2	0.933
NZ_FFHB01000002_2	2.7\|510722\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	510722-510751	30	MT178766	Listeria virus P100plus, complete genome	96638-96667	2	0.933
NZ_FFHB01000002_2	2.7\|510722\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	510722-510751	30	NC_025440	Listeria phage WIL-1, complete genome	37729-37758	2	0.933
NZ_FFHB01000002_2	2.7\|510722\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	510722-510751	30	MT178767	Listeria virus P200, complete genome	96639-96668	2	0.933
NZ_FFHB01000002_2	2.7\|510722\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	510722-510751	30	KJ591605	Listeria phage LMTA-57, complete genome	12361-12390	2	0.933
NZ_FFHB01000002_2	2.9\|510854\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	510854-510883	30	KP399678	Listeria phage vB_LmoS_293, complete genome	29033-29062	2	0.933
NZ_FFHB01000002_2	2.17\|511383\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511383-511412	30	NC_003216	Listeria phage A118, complete genome	17880-17909	2	0.933
NZ_FFHB01000002_2	2.17\|511383\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511383-511412	30	AJ242593	Bacteriophage A118 complete genome	17880-17909	2	0.933
NZ_FFHB01000002_2	2.19\|511515\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511515-511544	30	MN114083	Listeria phage LP-013, complete genome	48006-48035	2	0.933
NZ_FFHB01000002_2	2.19\|511515\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511515-511544	30	MN114082	Listeria phage LP-010, complete genome	47291-47320	2	0.933
NZ_FFHB01000002_2	2.26\|511977\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511977-512006	30	MN172529	Listeria phage LP-039, complete genome	998-1027	2	0.933
NZ_FFHB01000002_2	2.26\|511977\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511977-512006	30	MN172529	Listeria phage LP-039, complete genome	134024-134053	2	0.933
NZ_FFHB01000002_2	2.26\|511977\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511977-512006	30	MT668624	Listeria phage LP-Mix_6.2, complete genome	998-1027	2	0.933
NZ_FFHB01000002_2	2.26\|511977\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511977-512006	30	MT668624	Listeria phage LP-Mix_6.2, complete genome	136566-136595	2	0.933
NZ_FFHB01000002_2	2.26\|511977\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511977-512006	30	KJ094033	Listeria phage LP-048, complete genome	3452-3481	2	0.933
NZ_FFHB01000002_2	2.27\|512043\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT,PILER-CR	512043-512072	30	KJ591605	Listeria phage LMTA-57, complete genome	7852-7881	2	0.933
NZ_FFHB01000002_2	2.27\|512043\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT,PILER-CR	512043-512072	30	NC_042048	Listeria phage LMTA-34, complete genome	13576-13605	2	0.933
NZ_FFHB01000002_2	2.27\|512043\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT,PILER-CR	512043-512072	30	NC_024360	Listeria phage LMSP-25, complete genome	13576-13605	2	0.933
NZ_FFHB01000002_2	2.30\|512241\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT,PILER-CR	512241-512270	30	KJ668718	Listeria phage LMTA-34 hypothetical proteins and DNA modification protein genes, complete cds	2226-2255	2	0.933
NZ_FFHB01000002_2	2.30\|512241\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT,PILER-CR	512241-512270	30	JQ797329	Listeria phage vB_LmoM_AG20, complete genome	130258-130287	2	0.933
NZ_FFHB01000002_2	2.2\|510392\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	510392-510421	30	JB137888	Sequence 7 from Patent WO2012159774	340-369	3	0.9
NZ_FFHB01000002_2	2.7\|510722\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	510722-510751	30	MK792752	UNVERIFIED: Listera phage vB-LmoM-SH3-3, complete genome	6095-6124	3	0.9
NZ_FFHB01000002_2	2.7\|510722\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	510722-510751	30	NC_047872	Listeria phage LMTA-94, complete genome	1980-2009	3	0.9
NZ_FFHB01000002_2	2.7\|510722\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	510722-510751	30	NC_042048	Listeria phage LMTA-34, complete genome	9080-9109	3	0.9
NZ_FFHB01000002_2	2.7\|510722\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	510722-510751	30	NC_024360	Listeria phage LMSP-25, complete genome	9080-9109	3	0.9
NZ_FFHB01000002_2	2.9\|510854\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	510854-510883	30	KP399677	Listeria phage vB_LmoS_188, complete genome	27664-27693	3	0.9
NZ_FFHB01000002_2	2.19\|511515\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511515-511544	30	MH299806	Listeria phage LP-KV022, complete genome	52479-52508	3	0.9
NZ_FFHB01000002_2	2.19\|511515\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511515-511544	30	JB137888	Sequence 7 from Patent WO2012159774	837-866	3	0.9
NZ_FFHB01000002_2	2.19\|511515\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511515-511544	30	NC_021785	Listeria phage LP-110, complete genome	10197-10226	3	0.9
NZ_FFHB01000002_2	2.27\|512043\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT,PILER-CR	512043-512072	30	KJ668716	Listeria phage LMTA-34 hypothetical protein genes, complete cds	4369-4398	3	0.9
NZ_FFHB01000002_2	2.27\|512043\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT,PILER-CR	512043-512072	30	NC_025440	Listeria phage WIL-1, complete genome	33374-33403	3	0.9
NZ_FFHB01000002_2	2.27\|512043\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT,PILER-CR	512043-512072	30	DQ003638	Listeria phage A511, complete genome	134220-134249	3	0.9
NZ_FFHB01000002_2	2.27\|512043\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT,PILER-CR	512043-512072	30	MN128594	Listeria phage LP-066, complete genome	135510-135539	3	0.9
NZ_FFHB01000002_2	2.27\|512043\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT,PILER-CR	512043-512072	30	KJ094030	Listeria phage LP-083-2, complete genome	4901-4930	3	0.9
NZ_FFHB01000002_2	2.27\|512043\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT,PILER-CR	512043-512072	30	KT319598	UNVERIFIED: Listeria phage WIL-2 genomic sequence	33096-33125	3	0.9
NZ_FFHB01000002_2	2.27\|512043\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT,PILER-CR	512043-512072	30	KJ094031	Listeria phage LP-124, complete genome	102786-102815	3	0.9
NZ_FFHB01000002_2	2.7\|510722\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	510722-510751	30	MT668624	Listeria phage LP-Mix_6.2, complete genome	131618-131647	4	0.867
NZ_FFHB01000002_2	2.7\|510722\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	510722-510751	30	MN128594	Listeria phage LP-066, complete genome	132108-132137	4	0.867
NZ_FFHB01000002_2	2.7\|510722\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	510722-510751	30	NC_041862	Listeria phage LP-064, complete genome	4432-4461	4	0.867
NZ_FFHB01000002_2	2.7\|510722\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	510722-510751	30	KJ094030	Listeria phage LP-083-2, complete genome	1499-1528	4	0.867
NZ_FFHB01000002_2	2.7\|510722\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	510722-510751	30	JX126918	Listeria phage LP-125, complete genome	4432-4461	4	0.867
NZ_FFHB01000002_2	2.7\|510722\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	510722-510751	30	KJ094031	Listeria phage LP-124, complete genome	99384-99413	4	0.867
NZ_FFHB01000002_2	2.9\|510854\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	510854-510883	30	NC_020157	Anabaena cylindrica PCC 7122 plasmid pANACY.02, complete sequence	170220-170249	4	0.867
NZ_FFHB01000002_2	2.19\|511515\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511515-511544	30	KJ094026	Listeria phage LP-032 contig 3, partial genome	10345-10374	5	0.833
NZ_FFHB01000002_2	2.19\|511515\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511515-511544	30	MN128593	Listeria phage LP-031, complete genome	47295-47324	5	0.833
NZ_FFHB01000002_2	2.19\|511515\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511515-511544	30	NC_021787	Listeria phage LP-037, complete genome	4676-4705	5	0.833
NZ_FFHB01000002_2	2.19\|511515\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511515-511544	30	MN904502	Listeria phage LP-018, complete genome	47454-47483	5	0.833
NZ_FFHB01000002_2	2.19\|511515\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511515-511544	30	JX442241	Listeria phage P70, complete genome	54613-54642	5	0.833
NZ_FFHB01000002_2	2.19\|511515\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511515-511544	30	KJ094020	Listeria phage LP-026, complete genome	30828-30857	5	0.833
NZ_FFHB01000002_2	2.19\|511515\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511515-511544	30	KJ094021	Listeria phage LP-114, complete genome	38019-38048	5	0.833
NZ_FFHB01000002_2	2.26\|511977\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511977-512006	30	NC_013373	Staphylococcus sp. CDC3 plasmid SAP020A, complete sequence	38151-38180	5	0.833
NZ_FFHB01000002_2	2.9\|510854\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	510854-510883	30	NZ_LR215032	Mycoplasma gallopavonis strain NCTC10186 plasmid 2	347991-348020	6	0.8
NZ_FFHB01000002_2	2.15\|511251\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511251-511280	30	NZ_CP014203	Clostridium baratii strain CDC51267 plasmid pNPD11_1, complete sequence	84179-84208	6	0.8
NZ_FFHB01000002_2	2.15\|511251\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511251-511280	30	NC_004574	Ruegeria sp. PR1b plasmid pSD25, complete sequence	34184-34213	6	0.8
NZ_FFHB01000002_2	2.17\|511383\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511383-511412	30	NZ_CP023068	Ensifer sojae CCBAU 05684 plasmid pSJ05684b, complete sequence	1490341-1490370	6	0.8
NZ_FFHB01000002_2	2.22\|511713\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511713-511742	30	NZ_CP021170	Paenibacillus bovis strain BD3526 plasmid unnamed1, complete sequence	32901-32930	6	0.8
NZ_FFHB01000002_2	2.26\|511977\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511977-512006	30	NZ_CP031989	Acinetobacter haemolyticus strain 5227 plasmid pAhaem5227b, complete sequence	7271-7300	6	0.8
NZ_FFHB01000002_2	2.30\|512241\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT,PILER-CR	512241-512270	30	NZ_AP014867	Bacillus thuringiensis serovar tolworthi strain Pasteur Institute Standard strain plasmid pKK3, complete sequence	63187-63216	6	0.8
NZ_FFHB01000002_2	2.30\|512241\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT,PILER-CR	512241-512270	30	NC_011730	Gloeothece citriformis PCC 7424 plasmid pP742403, complete sequence	25037-25066	6	0.8
NZ_FFHB01000002_2	2.9\|510854\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	510854-510883	30	NC_022774	Bacillus phage Slash, complete genome	76691-76720	7	0.767
NZ_FFHB01000002_2	2.9\|510854\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	510854-510883	30	KT345706	Vibrio phage vB_VorS-PVo5, complete genome	58694-58723	7	0.767
NZ_FFHB01000002_2	2.9\|510854\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	510854-510883	30	MN693549	Marine virus AFVG_25M89, complete genome	4908-4937	7	0.767
NZ_FFHB01000002_2	2.9\|510854\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	510854-510883	30	AP014070	Uncultured Mediterranean phage uvMED isolate uvMED-GF-C2-MedDCM-OCT-S42-C71, * SEQUENCING IN PROGRESS *	20151-20180	7	0.767
NZ_FFHB01000002_2	2.9\|510854\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	510854-510883	30	AP014069	Uncultured Mediterranean phage uvMED isolate uvMED-GF-C2-MedDCM-OCT-S40-C35, * SEQUENCING IN PROGRESS *	13878-13907	7	0.767
NZ_FFHB01000002_2	2.21\|511647\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511647-511676	30	MN694303	Marine virus AFVG_250M806, complete genome	45836-45865	7	0.767
NZ_FFHB01000002_2	2.22\|511713\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511713-511742	30	NZ_CP049249	Rhizobium rhizoryzae strain DSM 29514 plasmid unnamed3, complete sequence	948785-948814	7	0.767
NZ_FFHB01000002_2	2.26\|511977\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511977-512006	30	NC_008226	Clostridioides difficile 630 plasmid pCD630, complete sequence	2090-2119	7	0.767
NZ_FFHB01000002_2	2.26\|511977\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511977-512006	30	NZ_CP016319	Clostridioides difficile strain 630 delta erm plasmid pCD630, complete sequence	4992-5021	7	0.767
NZ_FFHB01000002_2	2.26\|511977\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511977-512006	30	NZ_MG019959	Clostridioides difficile isolate ERR017368_NODE12 plasmid pCD-WTSI1, complete sequence	1498-1527	7	0.767
NZ_FFHB01000002_2	2.26\|511977\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511977-512006	30	NZ_MG019961	Clostridioides difficile isolate ERR125910_NODE5 plasmid pCD-WTSI3, complete sequence	1502-1531	7	0.767
NZ_FFHB01000002_2	2.26\|511977\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511977-512006	30	NZ_MG019962	Clostridioides difficile isolate ERR125911_NODE11 plasmid pCD-WTSI4, complete sequence	1498-1527	7	0.767
NZ_FFHB01000002_2	2.26\|511977\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511977-512006	30	NZ_MG019960	Clostridioides difficile isolate ERR022513_NODE32 plasmid pCD-WTSI2, complete sequence	1498-1527	7	0.767
NZ_FFHB01000002_2	2.26\|511977\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511977-512006	30	NZ_MG266000	Clostridioides difficile strain 7032985 plasmid pCD-ISS1, complete sequence	2096-2125	7	0.767
NZ_FFHB01000002_2	2.26\|511977\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511977-512006	30	NZ_CP017574	Bacillus thuringiensis strain SCG04-02 plasmid PSCG364, complete sequence	158655-158684	7	0.767
NZ_FFHB01000002_2	2.26\|511977\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511977-512006	30	NZ_CP012100	Bacillus thuringiensis strain HS18-1 plasmid pHS18-1, complete sequence	369433-369462	7	0.767
NZ_FFHB01000002_2	2.26\|511977\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511977-512006	30	NC_008014	Lawsonia intracellularis PHE/MN1-00 plasmid 3, complete sequence	117071-117100	7	0.767
NZ_FFHB01000002_2	2.26\|511977\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511977-512006	30	NC_020130	Lawsonia intracellularis N343 plasmid 3, complete sequence	117093-117122	7	0.767
NZ_FFHB01000002_2	2.27\|512043\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT,PILER-CR	512043-512072	30	NC_019388	Thermus oshimai JL-2 plasmid pTHEOS02, complete sequence	18295-18324	7	0.767
NZ_FFHB01000002_2	2.27\|512043\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT,PILER-CR	512043-512072	30	NZ_CP010824	Thermus aquaticus Y51MC23 plasmid pTA16, complete sequence	3497-3526	7	0.767
NZ_FFHB01000002_2	2.30\|512241\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT,PILER-CR	512241-512270	30	NC_021793	Cellulophaga phage phi48:2, complete genome	2953-2982	7	0.767
NZ_FFHB01000002_2	2.30\|512241\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT,PILER-CR	512241-512270	30	HQ683709	Planktothrix phage PaV-LD, complete genome	41599-41628	7	0.767
NZ_FFHB01000002_2	2.30\|512241\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT,PILER-CR	512241-512270	30	HQ683709	Planktothrix phage PaV-LD, complete genome	45663-45692	7	0.767
NZ_FFHB01000002_2	2.30\|512241\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT,PILER-CR	512241-512270	30	MF417937	Uncultured Caudovirales phage clone 10F_6, partial genome	16982-17011	7	0.767
NZ_FFHB01000002_2	2.1\|510326\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	510326-510355	30	NZ_CP040765	Paracoccus sp. 2251 plasmid unnamed1, complete sequence	223230-223259	8	0.733
NZ_FFHB01000002_2	2.5\|510590\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT,PILER-CR	510590-510619	30	NC_012970	Methylovorus glucosetrophus SIP3-4 plasmid pMsip01, complete sequence	63330-63359	8	0.733
NZ_FFHB01000002_2	2.5\|510590\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT,PILER-CR	510590-510619	30	MN552143	Lactococcus phage P1046, complete genome	19997-20026	8	0.733
NZ_FFHB01000002_2	2.5\|510590\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT,PILER-CR	510590-510619	30	NC_010576	Lactococcus phage 1706, complete genome	21200-21229	8	0.733
NZ_FFHB01000002_2	2.5\|510590\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT,PILER-CR	510590-510619	30	MK779875	Lactococcus phage CHPC971, complete genome	20962-20991	8	0.733
NZ_FFHB01000002_2	2.8\|510788\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	510788-510817	30	MN035989	Leviviridae sp. isolate H3_Bulk_41_scaffold_462 RNA-dependent RNA polymerase (H3Bulk41462_000001), hypothetical protein (H3Bulk41462_000002), hypothetical protein (H3Bulk41462_000003), and hypothetical protein (H3Bulk41462_000004) genes, complete cds	382-411	8	0.733
NZ_FFHB01000002_2	2.9\|510854\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	510854-510883	30	NZ_CP017574	Bacillus thuringiensis strain SCG04-02 plasmid PSCG364, complete sequence	345792-345821	8	0.733
NZ_FFHB01000002_2	2.9\|510854\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	510854-510883	30	NZ_CP031992	Acinetobacter haemolyticus strain 2126ch plasmid pAhaem2126chf, complete sequence	52422-52451	8	0.733
NZ_FFHB01000002_2	2.9\|510854\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	510854-510883	30	NZ_CP010111	Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-5, complete sequence	158431-158460	8	0.733
NZ_FFHB01000002_2	2.9\|510854\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	510854-510883	30	NZ_CP026415	Acinetobacter sp. ACNIH2 plasmid pACI-55cf, complete sequence	60676-60705	8	0.733
NZ_FFHB01000002_2	2.9\|510854\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	510854-510883	30	NZ_CP018872	Acinetobacter haemolyticus strain TJS01 plasmid pAHTJS1, complete sequence	51103-51132	8	0.733
NZ_FFHB01000002_2	2.9\|510854\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	510854-510883	30	MH319731	Marine virus AG-345-E02 Ga0172268_11 genomic sequence	38422-38451	8	0.733
NZ_FFHB01000002_2	2.9\|510854\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	510854-510883	30	MN694545	Marine virus AFVG_250M894, complete genome	12846-12875	8	0.733
NZ_FFHB01000002_2	2.10\|510920\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	510920-510949	30	AP017924	Ralstonia phage RP12 DNA, complete genome	83724-83753	8	0.733
NZ_FFHB01000002_2	2.10\|510920\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	510920-510949	30	AP017925	Ralstonia phage RP31 DNA, complete genome	80469-80498	8	0.733
NZ_FFHB01000002_2	2.10\|510920\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	510920-510949	30	AP014501	Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S32-C4, * SEQUENCING IN PROGRESS *, 3 ordered pieces	19152-19181	8	0.733
NZ_FFHB01000002_2	2.12\|511052\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511052-511081	30	NZ_CP025513	Neorhizobium sp. SOG26 plasmid unnamed2, complete sequence	1092818-1092847	8	0.733
NZ_FFHB01000002_2	2.13\|511118\|31\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511118-511148	31	NZ_CP047439	Spiroplasma citri strain BLH-MB plasmid pSciBLHMB-2, complete sequence	32089-32119	8	0.742
NZ_FFHB01000002_2	2.13\|511118\|31\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511118-511148	31	NZ_CP047440	Spiroplasma citri strain BLH-MB plasmid pSciBLHMB-3, complete sequence	57249-57279	8	0.742
NZ_FFHB01000002_2	2.20\|511581\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511581-511610	30	NZ_CP017105	Rhizobium gallicum strain IE4872 plasmid pRgalIE4872d, complete sequence	35867-35896	8	0.733
NZ_FFHB01000002_2	2.21\|511647\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511647-511676	30	HM452126	Aeromonas phage phiAS5, complete genome	156053-156082	8	0.733
NZ_FFHB01000002_2	2.25\|511911\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511911-511940	30	NZ_CP009275	Klebsiella variicola strain DX120E plasmid pKV1, complete sequence	21888-21917	8	0.733
NZ_FFHB01000002_2	2.25\|511911\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511911-511940	30	MT786458	Staphylococcus phage vB_SauH_SAP1, complete genome	114164-114193	8	0.733
NZ_FFHB01000002_2	2.26\|511977\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511977-512006	30	NZ_CP017256	Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence	132795-132824	8	0.733
NZ_FFHB01000002_2	2.26\|511977\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511977-512006	30	NZ_CP018746	Borreliella garinii strain CIP 103362 isolate 20047 plasmid unnamed1	27747-27776	8	0.733
NZ_FFHB01000002_2	2.26\|511977\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511977-512006	30	NZ_CP028865	Borreliella garinii strain 20047 plasmid lp36, complete sequence	9252-9281	8	0.733
NZ_FFHB01000002_2	2.31\|512307\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT,PILER-CR	512307-512336	30	NZ_HG938354	Neorhizobium galegae bv. orientalis str. HAMBI 540 plasmid pHAMBI540a, complete sequence	1233492-1233521	8	0.733
NZ_FFHB01000002_2	2.32\|512373\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT,PILER-CR	512373-512402	30	NZ_CP019039	Bacillus velezensis strain GH1-13 plasmid unnamed, complete sequence	8876-8905	8	0.733
NZ_FFHB01000002_2	2.32\|512373\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT,PILER-CR	512373-512402	30	NZ_CP019234	Bacillus thuringiensis strain YGd22-03 plasmid pYGD83, complete sequence	12438-12467	8	0.733
NZ_FFHB01000002_2	2.34\|512505\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT,PILER-CR	512505-512534	30	MH791404	UNVERIFIED: Aeromonas phage Assk, partial genome	139787-139816	8	0.733
NZ_FFHB01000002_2	2.34\|512505\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT,PILER-CR	512505-512534	30	NC_019538	Aeromonas phage CC2, complete genome	139696-139725	8	0.733
NZ_FFHB01000002_2	2.39\|512836\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	512836-512865	30	MN855765	Myoviridae sp. isolate 14, complete genome	24949-24978	8	0.733
NZ_FFHB01000002_2	2.20\|511581\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511581-511610	30	NZ_CP045296	Paenibacillus cellulositrophicus strain KACC 16577 plasmid unnamed1, complete sequence	142346-142375	9	0.7
NZ_FFHB01000002_2	2.21\|511647\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511647-511676	30	MN393079	Salmonella virus VSiA, complete genome	26795-26824	9	0.7
NZ_FFHB01000002_2	2.21\|511647\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511647-511676	30	MH424444	Salmonella virus VSiP, complete genome	26915-26944	9	0.7
NZ_FFHB01000002_2	2.26\|511977\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511977-512006	30	NZ_CP039210	Piscirickettsia salmonis strain Psal-103 plasmid unnamed1, complete sequence	65715-65744	9	0.7
NZ_FFHB01000002_2	2.26\|511977\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511977-512006	30	NZ_CP048067	Piscirickettsia salmonis strain Ps-8079A plasmid Ps8079A-p1, complete sequence	52445-52474	9	0.7
NZ_FFHB01000002_2	2.26\|511977\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511977-512006	30	NZ_CP039033	Piscirickettsia salmonis strain Psal-070 plasmid unnamed1, complete sequence	68222-68251	9	0.7
NZ_FFHB01000002_2	2.26\|511977\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511977-512006	30	NZ_CP038894	Piscirickettsia salmonis strain Psal-006a plasmid unnamed1, complete sequence	68982-69011	9	0.7
NZ_FFHB01000002_2	2.26\|511977\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511977-512006	30	NZ_CP038924	Piscirickettsia salmonis strain Psal-011 plasmid unnamed1, complete sequence	103349-103378	9	0.7
NZ_FFHB01000002_2	2.26\|511977\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511977-512006	30	NZ_CP038953	Piscirickettsia salmonis strain Psal-040 plasmid unnamed1, complete sequence	136654-136683	9	0.7
NZ_FFHB01000002_2	2.26\|511977\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511977-512006	30	NZ_CP038958	Piscirickettsia salmonis strain Psal-041 plasmid unnamed1, complete sequence	90864-90893	9	0.7
NZ_FFHB01000002_2	2.26\|511977\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511977-512006	30	NZ_CP039196	Piscirickettsia salmonis strain Psal-161 plasmid unnamed1, complete sequence	154015-154044	9	0.7
NZ_FFHB01000002_2	2.26\|511977\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511977-512006	30	NZ_CP038812	Piscirickettsia salmonis strain Psal-001 plasmid unnamed1, complete sequence	83314-83343	9	0.7
NZ_FFHB01000002_2	2.26\|511977\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511977-512006	30	NZ_CP013769	Piscirickettsia salmonis strain PM23019A plasmid p1PS3, complete sequence	48925-48954	9	0.7
NZ_FFHB01000002_2	2.26\|511977\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511977-512006	30	NZ_CP033942	Piscirickettsia salmonis strain EM-90 plasmid pPSEM90-5, complete sequence	18798-18827	9	0.7
NZ_FFHB01000002_2	2.26\|511977\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511977-512006	30	NZ_CP039228	Piscirickettsia salmonis strain SR1 plasmid unnamed1, complete sequence	112577-112606	9	0.7
NZ_FFHB01000002_2	2.26\|511977\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511977-512006	30	NZ_CP013761	Piscirickettsia salmonis strain AY6492A plasmid p4PS1, complete sequence	50274-50303	9	0.7
NZ_FFHB01000002_2	2.26\|511977\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511977-512006	30	NZ_CP013774	Piscirickettsia salmonis strain PM37984A plasmid p1PS4, complete sequence	125910-125939	9	0.7
NZ_FFHB01000002_2	2.26\|511977\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511977-512006	30	NZ_CP013779	Piscirickettsia salmonis strain PM51819A plasmid p1PS5, complete sequence	8585-8614	9	0.7
NZ_FFHB01000002_2	2.26\|511977\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511977-512006	30	NZ_CP050945	Piscirickettsia salmonis strain Ps-2192A plasmid Ps2192A-p7, complete sequence	171443-171472	9	0.7
NZ_FFHB01000002_2	2.26\|511977\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511977-512006	30	NZ_CP038892	Piscirickettsia salmonis strain Psal-005 plasmid unnamed1, complete sequence	103636-103665	9	0.7
NZ_FFHB01000002_2	2.26\|511977\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511977-512006	30	NZ_CP038914	Piscirickettsia salmonis strain Psal-010a plasmid unnamed1, complete sequence	68221-68250	9	0.7
NZ_FFHB01000002_2	2.26\|511977\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511977-512006	30	NZ_CP038968	Piscirickettsia salmonis strain Psal-068 plasmid unnamed1, complete sequence	83316-83345	9	0.7
NZ_FFHB01000002_2	2.26\|511977\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511977-512006	30	NZ_CP039202	Piscirickettsia salmonis strain Psal-163 plasmid unnamed1, complete sequence	99674-99703	9	0.7
NZ_FFHB01000002_2	2.26\|511977\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511977-512006	30	NZ_CP039205	Piscirickettsia salmonis strain Psal-182 plasmid unnamed1, complete sequence	90282-90311	9	0.7
NZ_FFHB01000002_2	2.26\|511977\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511977-512006	30	NZ_CP039235	Piscirickettsia salmonis strain BI1 plasmid unnamed1, complete sequence	50265-50294	9	0.7
NZ_FFHB01000002_2	2.26\|511977\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511977-512006	30	NZ_CP039241	Piscirickettsia salmonis strain MR5 plasmid unnamed1, complete sequence	113202-113231	9	0.7
NZ_FFHB01000002_2	2.26\|511977\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511977-512006	30	NZ_CP039042	Piscirickettsia salmonis strain Psal-072 plasmid unnamed2, complete sequence	68983-69012	9	0.7
NZ_FFHB01000002_2	2.26\|511977\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511977-512006	30	NZ_CP039187	Piscirickettsia salmonis strain Psal-159 plasmid unnamed1, complete sequence	99678-99707	9	0.7
NZ_FFHB01000002_2	2.26\|511977\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511977-512006	30	NZ_CP038948	Piscirickettsia salmonis strain Psal-028 plasmid unnamed1, complete sequence	130763-130792	9	0.7
NZ_FFHB01000002_2	2.26\|511977\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511977-512006	30	NZ_CP038933	Piscirickettsia salmonis strain Psal-025 plasmid unnamed1, complete sequence	143191-143220	9	0.7
NZ_FFHB01000002_2	2.26\|511977\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511977-512006	30	NZ_CP038973	Piscirickettsia salmonis strain Psal-069 plasmid unnamed1, complete sequence	103637-103666	9	0.7
NZ_FFHB01000002_2	2.26\|511977\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511977-512006	30	NZ_CP039036	Piscirickettsia salmonis strain Psal-071 plasmid unnamed1, complete sequence	68983-69012	9	0.7
NZ_FFHB01000002_2	2.26\|511977\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511977-512006	30	NZ_CP039066	Piscirickettsia salmonis strain Psal-107 plasmid unnamed1, complete sequence	99678-99707	9	0.7
NZ_FFHB01000002_2	2.26\|511977\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511977-512006	30	NZ_CP038887	Piscirickettsia salmonis strain Psal-004 plasmid unnamed1, complete sequence	38330-38359	9	0.7
NZ_FFHB01000002_2	2.26\|511977\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511977-512006	30	NZ_CP039215	Piscirickettsia salmonis strain Psal-104a plasmid unnamed1, complete sequence	83262-83291	9	0.7
NZ_FFHB01000002_2	2.26\|511977\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511977-512006	30	NZ_CP038909	Piscirickettsia salmonis strain Psal-009 plasmid unnamed1, complete sequence	85913-85942	9	0.7
NZ_FFHB01000002_2	2.26\|511977\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511977-512006	30	NZ_CP038938	Piscirickettsia salmonis strain Psal-026 plasmid unnamed1, complete sequence	57693-57722	9	0.7
NZ_FFHB01000002_2	2.26\|511977\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511977-512006	30	NZ_CP038963	Piscirickettsia salmonis strain Psal-051 plasmid unnamed1, complete sequence	68983-69012	9	0.7
NZ_FFHB01000002_2	2.26\|511977\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511977-512006	30	NZ_CP038877	Piscirickettsia salmonis strain Psal-002 plasmid unnamed1, complete sequence	83263-83292	9	0.7
NZ_FFHB01000002_2	2.26\|511977\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	511977-512006	30	NZ_CP038882	Piscirickettsia salmonis strain Psal-003 plasmid unnamed1, complete sequence	39289-39318	9	0.7
NZ_FFHB01000002_2	2.27\|512043\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT,PILER-CR	512043-512072	30	NZ_AP017376	Stanieria sp. NIES-3757 plasmid plasmid1 DNA, complete genome	67436-67465	9	0.7
NZ_FFHB01000002_2	2.37\|512704\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT,PILER-CR	512704-512733	30	NZ_LR136959	Alteromonas sp. 76-1 plasmid pAlt76, complete sequence	31734-31763	9	0.7

1. spacer 2.2|510392|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to MH299806 (Listeria phage LP-KV022, complete genome) position: , mismatch: 0, identity: 1.0

gatagtagtataataactgtgctaatatgg	CRISPR spacer
gatagtagtataataactgtgctaatatgg	Protospacer
******************************

2. spacer 2.2|510392|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to MN114083 (Listeria phage LP-013, complete genome) position: , mismatch: 0, identity: 1.0

gatagtagtataataactgtgctaatatgg	CRISPR spacer
gatagtagtataataactgtgctaatatgg	Protospacer
******************************

3. spacer 2.2|510392|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NC_021785 (Listeria phage LP-110, complete genome) position: , mismatch: 0, identity: 1.0

gatagtagtataataactgtgctaatatgg	CRISPR spacer
gatagtagtataataactgtgctaatatgg	Protospacer
******************************

4. spacer 2.2|510392|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to KJ094026 (Listeria phage LP-032 contig 3, partial genome) position: , mismatch: 0, identity: 1.0

gatagtagtataataactgtgctaatatgg	CRISPR spacer
gatagtagtataataactgtgctaatatgg	Protospacer
******************************

5. spacer 2.2|510392|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to MN128593 (Listeria phage LP-031, complete genome) position: , mismatch: 0, identity: 1.0

gatagtagtataataactgtgctaatatgg	CRISPR spacer
gatagtagtataataactgtgctaatatgg	Protospacer
******************************

6. spacer 2.2|510392|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NC_021787 (Listeria phage LP-037, complete genome) position: , mismatch: 0, identity: 1.0

gatagtagtataataactgtgctaatatgg	CRISPR spacer
gatagtagtataataactgtgctaatatgg	Protospacer
******************************

7. spacer 2.2|510392|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to JX442241 (Listeria phage P70, complete genome) position: , mismatch: 0, identity: 1.0

gatagtagtataataactgtgctaatatgg	CRISPR spacer
gatagtagtataataactgtgctaatatgg	Protospacer
******************************

8. spacer 2.2|510392|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to KJ094020 (Listeria phage LP-026, complete genome) position: , mismatch: 0, identity: 1.0

gatagtagtataataactgtgctaatatgg	CRISPR spacer
gatagtagtataataactgtgctaatatgg	Protospacer
******************************

9. spacer 2.2|510392|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to KJ094021 (Listeria phage LP-114, complete genome) position: , mismatch: 0, identity: 1.0

gatagtagtataataactgtgctaatatgg	CRISPR spacer
gatagtagtataataactgtgctaatatgg	Protospacer
******************************

10. spacer 2.2|510392|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to MN114082 (Listeria phage LP-010, complete genome) position: , mismatch: 0, identity: 1.0

gatagtagtataataactgtgctaatatgg	CRISPR spacer
gatagtagtataataactgtgctaatatgg	Protospacer
******************************

11. spacer 2.6|510656|30|NZ_FFHB01000002|CRISPRCasFinder,CRT,PILER-CR matches to MT438761 (Listeria virus P61, complete genome) position: , mismatch: 0, identity: 1.0

tacttttattgtctgctaagaatactacta	CRISPR spacer
tacttttattgtctgctaagaatactacta	Protospacer
******************************

12. spacer 2.6|510656|30|NZ_FFHB01000002|CRISPRCasFinder,CRT,PILER-CR matches to MT668624 (Listeria phage LP-Mix_6.2, complete genome) position: , mismatch: 0, identity: 1.0

tacttttattgtctgctaagaatactacta	CRISPR spacer
tacttttattgtctgctaagaatactacta	Protospacer
******************************

13. spacer 2.6|510656|30|NZ_FFHB01000002|CRISPRCasFinder,CRT,PILER-CR matches to KJ668718 (Listeria phage LMTA-34 hypothetical proteins and DNA modification protein genes, complete cds) position: , mismatch: 0, identity: 1.0

tacttttattgtctgctaagaatactacta	CRISPR spacer
tacttttattgtctgctaagaatactacta	Protospacer
******************************

14. spacer 2.6|510656|30|NZ_FFHB01000002|CRISPRCasFinder,CRT,PILER-CR matches to MT178766 (Listeria virus P100plus, complete genome) position: , mismatch: 0, identity: 1.0

tacttttattgtctgctaagaatactacta	CRISPR spacer
tacttttattgtctgctaagaatactacta	Protospacer
******************************

15. spacer 2.6|510656|30|NZ_FFHB01000002|CRISPRCasFinder,CRT,PILER-CR matches to NC_047872 (Listeria phage LMTA-94, complete genome) position: , mismatch: 0, identity: 1.0

tacttttattgtctgctaagaatactacta	CRISPR spacer
tacttttattgtctgctaagaatactacta	Protospacer
******************************

16. spacer 2.6|510656|30|NZ_FFHB01000002|CRISPRCasFinder,CRT,PILER-CR matches to MT178767 (Listeria virus P200, complete genome) position: , mismatch: 0, identity: 1.0

tacttttattgtctgctaagaatactacta	CRISPR spacer
tacttttattgtctgctaagaatactacta	Protospacer
******************************

17. spacer 2.6|510656|30|NZ_FFHB01000002|CRISPRCasFinder,CRT,PILER-CR matches to KJ591605 (Listeria phage LMTA-57, complete genome) position: , mismatch: 0, identity: 1.0

tacttttattgtctgctaagaatactacta	CRISPR spacer
tacttttattgtctgctaagaatactacta	Protospacer
******************************

18. spacer 2.6|510656|30|NZ_FFHB01000002|CRISPRCasFinder,CRT,PILER-CR matches to MN128594 (Listeria phage LP-066, complete genome) position: , mismatch: 0, identity: 1.0

tacttttattgtctgctaagaatactacta	CRISPR spacer
tacttttattgtctgctaagaatactacta	Protospacer
******************************

19. spacer 2.6|510656|30|NZ_FFHB01000002|CRISPRCasFinder,CRT,PILER-CR matches to NC_042048 (Listeria phage LMTA-34, complete genome) position: , mismatch: 0, identity: 1.0

tacttttattgtctgctaagaatactacta	CRISPR spacer
tacttttattgtctgctaagaatactacta	Protospacer
******************************

20. spacer 2.6|510656|30|NZ_FFHB01000002|CRISPRCasFinder,CRT,PILER-CR matches to MK792752 (UNVERIFIED: Listera phage vB-LmoM-SH3-3, complete genome) position: , mismatch: 0, identity: 1.0

tacttttattgtctgctaagaatactacta	CRISPR spacer
tacttttattgtctgctaagaatactacta	Protospacer
******************************

21. spacer 2.6|510656|30|NZ_FFHB01000002|CRISPRCasFinder,CRT,PILER-CR matches to NC_041862 (Listeria phage LP-064, complete genome) position: , mismatch: 0, identity: 1.0

tacttttattgtctgctaagaatactacta	CRISPR spacer
tacttttattgtctgctaagaatactacta	Protospacer
******************************

22. spacer 2.6|510656|30|NZ_FFHB01000002|CRISPRCasFinder,CRT,PILER-CR matches to KJ094030 (Listeria phage LP-083-2, complete genome) position: , mismatch: 0, identity: 1.0

tacttttattgtctgctaagaatactacta	CRISPR spacer
tacttttattgtctgctaagaatactacta	Protospacer
******************************

23. spacer 2.6|510656|30|NZ_FFHB01000002|CRISPRCasFinder,CRT,PILER-CR matches to JX126918 (Listeria phage LP-125, complete genome) position: , mismatch: 0, identity: 1.0

tacttttattgtctgctaagaatactacta	CRISPR spacer
tacttttattgtctgctaagaatactacta	Protospacer
******************************

24. spacer 2.6|510656|30|NZ_FFHB01000002|CRISPRCasFinder,CRT,PILER-CR matches to NC_024360 (Listeria phage LMSP-25, complete genome) position: , mismatch: 0, identity: 1.0

tacttttattgtctgctaagaatactacta	CRISPR spacer
tacttttattgtctgctaagaatactacta	Protospacer
******************************

25. spacer 2.6|510656|30|NZ_FFHB01000002|CRISPRCasFinder,CRT,PILER-CR matches to JQ797329 (Listeria phage vB_LmoM_AG20, complete genome) position: , mismatch: 0, identity: 1.0

tacttttattgtctgctaagaatactacta	CRISPR spacer
tacttttattgtctgctaagaatactacta	Protospacer
******************************

26. spacer 2.6|510656|30|NZ_FFHB01000002|CRISPRCasFinder,CRT,PILER-CR matches to KJ094031 (Listeria phage LP-124, complete genome) position: , mismatch: 0, identity: 1.0

tacttttattgtctgctaagaatactacta	CRISPR spacer
tacttttattgtctgctaagaatactacta	Protospacer
******************************

27. spacer 2.7|510722|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to DQ003638 (Listeria phage A511, complete genome) position: , mismatch: 0, identity: 1.0

attgtacaaattccaagtaactcatcatta	CRISPR spacer
attgtacaaattccaagtaactcatcatta	Protospacer
******************************

28. spacer 2.9|510854|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to DQ003637 (Listeria phage A500, complete genome) position: , mismatch: 0, identity: 1.0

taactttagatactgctaaagaattagcaa	CRISPR spacer
taactttagatactgctaaagaattagcaa	Protospacer
******************************

29. spacer 2.10|510920|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to DQ003637 (Listeria phage A500, complete genome) position: , mismatch: 0, identity: 1.0

tgtctgaatgtagttaatatcttcaacttg	CRISPR spacer
tgtctgaatgtagttaatatcttcaacttg	Protospacer
******************************

30. spacer 2.10|510920|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to KJ094022 (Listeria phage LP-030-3, complete genome) position: , mismatch: 0, identity: 1.0

tgtctgaatgtagttaatatcttcaacttg	CRISPR spacer
tgtctgaatgtagttaatatcttcaacttg	Protospacer
******************************

31. spacer 2.11|510986|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to MH341453 (Listeria phage PSU-VKH-LP041, complete genome) position: , mismatch: 0, identity: 1.0

cttcagtttcacctgtgaatacgccgttta	CRISPR spacer
cttcagtttcacctgtgaatacgccgttta	Protospacer
******************************

32. spacer 2.11|510986|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NC_009813 (Listeria phage B054, complete genome) position: , mismatch: 0, identity: 1.0

cttcagtttcacctgtgaatacgccgttta	CRISPR spacer
cttcagtttcacctgtgaatacgccgttta	Protospacer
******************************

33. spacer 2.18|511449|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to MH341452 (Listeria phage PSU-VKH-LP040, complete genome) position: , mismatch: 0, identity: 1.0

tccacttcgacgctggacgggctctcctca	CRISPR spacer
tccacttcgacgctggacgggctctcctca	Protospacer
******************************

34. spacer 2.18|511449|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to KJ094022 (Listeria phage LP-030-3, complete genome) position: , mismatch: 0, identity: 1.0

tccacttcgacgctggacgggctctcctca	CRISPR spacer
tccacttcgacgctggacgggctctcctca	Protospacer
******************************

35. spacer 2.18|511449|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to KP399678 (Listeria phage vB_LmoS_293, complete genome) position: , mismatch: 0, identity: 1.0

tccacttcgacgctggacgggctctcctca	CRISPR spacer
tccacttcgacgctggacgggctctcctca	Protospacer
******************************

36. spacer 2.26|511977|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to MT438761 (Listeria virus P61, complete genome) position: , mismatch: 0, identity: 1.0

agtatttattatctctattacttttgtata	CRISPR spacer
agtatttattatctctattacttttgtata	Protospacer
******************************

37. spacer 2.26|511977|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NC_047872 (Listeria phage LMTA-94, complete genome) position: , mismatch: 0, identity: 1.0

agtatttattatctctattacttttgtata	CRISPR spacer
agtatttattatctctattacttttgtata	Protospacer
******************************

38. spacer 2.26|511977|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to DQ003638 (Listeria phage A511, complete genome) position: , mismatch: 0, identity: 1.0

agtatttattatctctattacttttgtata	CRISPR spacer
agtatttattatctctattacttttgtata	Protospacer
******************************

39. spacer 2.26|511977|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to DQ003638 (Listeria phage A511, complete genome) position: , mismatch: 0, identity: 1.0

agtatttattatctctattacttttgtata	CRISPR spacer
agtatttattatctctattacttttgtata	Protospacer
******************************

40. spacer 2.26|511977|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to KJ591604 (Listeria phage LMTA-148, complete genome) position: , mismatch: 0, identity: 1.0

agtatttattatctctattacttttgtata	CRISPR spacer
agtatttattatctctattacttttgtata	Protospacer
******************************

41. spacer 2.26|511977|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to KJ591605 (Listeria phage LMTA-57, complete genome) position: , mismatch: 0, identity: 1.0

agtatttattatctctattacttttgtata	CRISPR spacer
agtatttattatctctattacttttgtata	Protospacer
******************************

42. spacer 2.26|511977|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to MN128594 (Listeria phage LP-066, complete genome) position: , mismatch: 0, identity: 1.0

agtatttattatctctattacttttgtata	CRISPR spacer
agtatttattatctctattacttttgtata	Protospacer
******************************

43. spacer 2.26|511977|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to MN128594 (Listeria phage LP-066, complete genome) position: , mismatch: 0, identity: 1.0

agtatttattatctctattacttttgtata	CRISPR spacer
agtatttattatctctattacttttgtata	Protospacer
******************************

44. spacer 2.26|511977|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NC_042048 (Listeria phage LMTA-34, complete genome) position: , mismatch: 0, identity: 1.0

agtatttattatctctattacttttgtata	CRISPR spacer
agtatttattatctctattacttttgtata	Protospacer
******************************

45. spacer 2.26|511977|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NC_041862 (Listeria phage LP-064, complete genome) position: , mismatch: 0, identity: 1.0

agtatttattatctctattacttttgtata	CRISPR spacer
agtatttattatctctattacttttgtata	Protospacer
******************************

46. spacer 2.26|511977|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to KJ094030 (Listeria phage LP-083-2, complete genome) position: , mismatch: 0, identity: 1.0

agtatttattatctctattacttttgtata	CRISPR spacer
agtatttattatctctattacttttgtata	Protospacer
******************************

47. spacer 2.26|511977|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to JX126918 (Listeria phage LP-125, complete genome) position: , mismatch: 0, identity: 1.0

agtatttattatctctattacttttgtata	CRISPR spacer
agtatttattatctctattacttttgtata	Protospacer
******************************

48. spacer 2.26|511977|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NC_024360 (Listeria phage LMSP-25, complete genome) position: , mismatch: 0, identity: 1.0

agtatttattatctctattacttttgtata	CRISPR spacer
agtatttattatctctattacttttgtata	Protospacer
******************************

49. spacer 2.26|511977|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to KJ535721 (Listeria phage List-36, complete genome) position: , mismatch: 0, identity: 1.0

agtatttattatctctattacttttgtata	CRISPR spacer
agtatttattatctctattacttttgtata	Protospacer
******************************

50. spacer 2.26|511977|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to KJ094031 (Listeria phage LP-124, complete genome) position: , mismatch: 0, identity: 1.0

agtatttattatctctattacttttgtata	CRISPR spacer
agtatttattatctctattacttttgtata	Protospacer
******************************

51. spacer 2.27|512043|30|NZ_FFHB01000002|CRISPRCasFinder,CRT,PILER-CR matches to MN172529 (Listeria phage LP-039, complete genome) position: , mismatch: 0, identity: 1.0

cgtattcaaaagtatatccgctagcctcaa	CRISPR spacer
cgtattcaaaagtatatccgctagcctcaa	Protospacer
******************************

52. spacer 2.27|512043|30|NZ_FFHB01000002|CRISPRCasFinder,CRT,PILER-CR matches to MT438761 (Listeria virus P61, complete genome) position: , mismatch: 0, identity: 1.0

cgtattcaaaagtatatccgctagcctcaa	CRISPR spacer
cgtattcaaaagtatatccgctagcctcaa	Protospacer
******************************

53. spacer 2.27|512043|30|NZ_FFHB01000002|CRISPRCasFinder,CRT,PILER-CR matches to MT668624 (Listeria phage LP-Mix_6.2, complete genome) position: , mismatch: 0, identity: 1.0

cgtattcaaaagtatatccgctagcctcaa	CRISPR spacer
cgtattcaaaagtatatccgctagcctcaa	Protospacer
******************************

54. spacer 2.27|512043|30|NZ_FFHB01000002|CRISPRCasFinder,CRT,PILER-CR matches to KJ591604 (Listeria phage LMTA-148, complete genome) position: , mismatch: 0, identity: 1.0

cgtattcaaaagtatatccgctagcctcaa	CRISPR spacer
cgtattcaaaagtatatccgctagcctcaa	Protospacer
******************************

55. spacer 2.27|512043|30|NZ_FFHB01000002|CRISPRCasFinder,CRT,PILER-CR matches to KJ094033 (Listeria phage LP-048, complete genome) position: , mismatch: 0, identity: 1.0

cgtattcaaaagtatatccgctagcctcaa	CRISPR spacer
cgtattcaaaagtatatccgctagcctcaa	Protospacer
******************************

56. spacer 2.27|512043|30|NZ_FFHB01000002|CRISPRCasFinder,CRT,PILER-CR matches to NC_041862 (Listeria phage LP-064, complete genome) position: , mismatch: 0, identity: 1.0

cgtattcaaaagtatatccgctagcctcaa	CRISPR spacer
cgtattcaaaagtatatccgctagcctcaa	Protospacer
******************************

57. spacer 2.27|512043|30|NZ_FFHB01000002|CRISPRCasFinder,CRT,PILER-CR matches to JX126918 (Listeria phage LP-125, complete genome) position: , mismatch: 0, identity: 1.0

cgtattcaaaagtatatccgctagcctcaa	CRISPR spacer
cgtattcaaaagtatatccgctagcctcaa	Protospacer
******************************

58. spacer 2.27|512043|30|NZ_FFHB01000002|CRISPRCasFinder,CRT,PILER-CR matches to JQ797329 (Listeria phage vB_LmoM_AG20, complete genome) position: , mismatch: 0, identity: 1.0

cgtattcaaaagtatatccgctagcctcaa	CRISPR spacer
cgtattcaaaagtatatccgctagcctcaa	Protospacer
******************************

59. spacer 2.27|512043|30|NZ_FFHB01000002|CRISPRCasFinder,CRT,PILER-CR matches to KJ535721 (Listeria phage List-36, complete genome) position: , mismatch: 0, identity: 1.0

cgtattcaaaagtatatccgctagcctcaa	CRISPR spacer
cgtattcaaaagtatatccgctagcctcaa	Protospacer
******************************

60. spacer 2.28|512109|30|NZ_FFHB01000002|CRISPRCasFinder,CRT,PILER-CR matches to MH341451 (Listeria phage PSU-VKH-LP019, complete genome) position: , mismatch: 0, identity: 1.0

taggtttagggagtaaattagctcctttgg	CRISPR spacer
taggtttagggagtaaattagctcctttgg	Protospacer
******************************

61. spacer 2.28|512109|30|NZ_FFHB01000002|CRISPRCasFinder,CRT,PILER-CR matches to DQ003642 (Listeria phage A006, complete genome) position: , mismatch: 0, identity: 1.0

taggtttagggagtaaattagctcctttgg	CRISPR spacer
taggtttagggagtaaattagctcctttgg	Protospacer
******************************

62. spacer 2.37|512704|30|NZ_FFHB01000002|CRISPRCasFinder,CRT,PILER-CR matches to KJ094023 (Listeria phage LP-101, complete genome) position: , mismatch: 0, identity: 1.0

ttgggcaaaatgaccgtaataaatccattc	CRISPR spacer
ttgggcaaaatgaccgtaataaatccattc	Protospacer
******************************

63. spacer 2.6|510656|30|NZ_FFHB01000002|CRISPRCasFinder,CRT,PILER-CR matches to MN172529 (Listeria phage LP-039, complete genome) position: , mismatch: 1, identity: 0.967

tacttttattgtctgctaagaatactacta	CRISPR spacer
tacttttgttgtctgctaagaatactacta	Protospacer
*******.**********************

64. spacer 2.6|510656|30|NZ_FFHB01000002|CRISPRCasFinder,CRT,PILER-CR matches to NC_025440 (Listeria phage WIL-1, complete genome) position: , mismatch: 1, identity: 0.967

tacttttattgtctgctaagaatactacta	CRISPR spacer
tacttttgttgtctgctaagaatactacta	Protospacer
*******.**********************

65. spacer 2.6|510656|30|NZ_FFHB01000002|CRISPRCasFinder,CRT,PILER-CR matches to DQ003638 (Listeria phage A511, complete genome) position: , mismatch: 1, identity: 0.967

tacttttattgtctgctaagaatactacta	CRISPR spacer
tacttttgttgtctgctaagaatactacta	Protospacer
*******.**********************

66. spacer 2.6|510656|30|NZ_FFHB01000002|CRISPRCasFinder,CRT,PILER-CR matches to KJ591604 (Listeria phage LMTA-148, complete genome) position: , mismatch: 1, identity: 0.967

tacttttattgtctgctaagaatactacta	CRISPR spacer
tacttttgttgtctgctaagaatactacta	Protospacer
*******.**********************

67. spacer 2.6|510656|30|NZ_FFHB01000002|CRISPRCasFinder,CRT,PILER-CR matches to KJ094033 (Listeria phage LP-048, complete genome) position: , mismatch: 1, identity: 0.967

tacttttattgtctgctaagaatactacta	CRISPR spacer
tacttttgttgtctgctaagaatactacta	Protospacer
*******.**********************

68. spacer 2.9|510854|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to MH341452 (Listeria phage PSU-VKH-LP040, complete genome) position: , mismatch: 1, identity: 0.967

taactttagatactgctaaagaattagcaa	CRISPR spacer
taactttagacactgctaaagaattagcaa	Protospacer
**********.*******************

69. spacer 2.9|510854|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to KJ094022 (Listeria phage LP-030-3, complete genome) position: , mismatch: 1, identity: 0.967

taactttagatactgctaaagaattagcaa	CRISPR spacer
taactttagacactgctaaagaattagcaa	Protospacer
**********.*******************

70. spacer 2.10|510920|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NC_003216 (Listeria phage A118, complete genome) position: , mismatch: 1, identity: 0.967

tgtctgaatgtagttaatatcttcaacttg	CRISPR spacer
tgtctggatgtagttaatatcttcaacttg	Protospacer
******.***********************

71. spacer 2.10|510920|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to AJ242593 (Bacteriophage A118 complete genome) position: , mismatch: 1, identity: 0.967

tgtctgaatgtagttaatatcttcaacttg	CRISPR spacer
tgtctggatgtagttaatatcttcaacttg	Protospacer
******.***********************

72. spacer 2.10|510920|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to DQ003642 (Listeria phage A006, complete genome) position: , mismatch: 1, identity: 0.967

tgtctgaatgtagttaatatcttcaacttg	CRISPR spacer
tgtctggatgtagttaatatcttcaacttg	Protospacer
******.***********************

73. spacer 2.18|511449|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NC_003216 (Listeria phage A118, complete genome) position: , mismatch: 1, identity: 0.967

tccacttcgacgctggacgggctctcctca	CRISPR spacer
cccacttcgacgctggacgggctctcctca	Protospacer
.*****************************

74. spacer 2.18|511449|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to AJ242593 (Bacteriophage A118 complete genome) position: , mismatch: 1, identity: 0.967

tccacttcgacgctggacgggctctcctca	CRISPR spacer
cccacttcgacgctggacgggctctcctca	Protospacer
.*****************************

75. spacer 2.24|511845|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to KJ094023 (Listeria phage LP-101, complete genome) position: , mismatch: 1, identity: 0.967

atatacaatgtctaagcttaatctttcggt	CRISPR spacer
atatacaatgtctaagtttaatctttcggt	Protospacer
****************.*************

76. spacer 2.26|511977|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to MT178766 (Listeria virus P100plus, complete genome) position: , mismatch: 1, identity: 0.967

agtatttattatctctattacttttgtata	CRISPR spacer
agtgtttattatctctattacttttgtata	Protospacer
***.**************************

77. spacer 2.26|511977|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NC_025440 (Listeria phage WIL-1, complete genome) position: , mismatch: 1, identity: 0.967

agtatttattatctctattacttttgtata	CRISPR spacer
agtatttattatctctattacgtttgtata	Protospacer
********************* ********

78. spacer 2.26|511977|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to MT178767 (Listeria virus P200, complete genome) position: , mismatch: 1, identity: 0.967

agtatttattatctctattacttttgtata	CRISPR spacer
agtgtttattatctctattacttttgtata	Protospacer
***.**************************

79. spacer 2.26|511977|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to DQ004855 (Listeria bacteriophage P100, complete genome) position: , mismatch: 1, identity: 0.967

agtatttattatctctattacttttgtata	CRISPR spacer
agtgtttattatctctattacttttgtata	Protospacer
***.**************************

80. spacer 2.26|511977|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to JQ797329 (Listeria phage vB_LmoM_AG20, complete genome) position: , mismatch: 1, identity: 0.967

agtatttattatctctattacttttgtata	CRISPR spacer
agtatttattgtctctattacttttgtata	Protospacer
**********.*******************

81. spacer 2.26|511977|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to KT319598 (UNVERIFIED: Listeria phage WIL-2 genomic sequence) position: , mismatch: 1, identity: 0.967

agtatttattatctctattacttttgtata	CRISPR spacer
agtatttattatctctattacgtttgtata	Protospacer
********************* ********

82. spacer 2.27|512043|30|NZ_FFHB01000002|CRISPRCasFinder,CRT,PILER-CR matches to NC_047872 (Listeria phage LMTA-94, complete genome) position: , mismatch: 1, identity: 0.967

cgtattcaaaagtatatccgctagcctcaa	CRISPR spacer
catattcaaaagtatatccgctagcctcaa	Protospacer
*.****************************

83. spacer 2.27|512043|30|NZ_FFHB01000002|CRISPRCasFinder,CRT,PILER-CR matches to MK792752 (UNVERIFIED: Listera phage vB-LmoM-SH3-3, complete genome) position: , mismatch: 1, identity: 0.967

cgtattcaaaagtatatccgctagcctcaa	CRISPR spacer
cgtattcaaaagtatatccgctagcctcga	Protospacer
****************************.*

84. spacer 2.29|512175|30|NZ_FFHB01000002|CRISPRCasFinder,CRT,PILER-CR matches to MH341451 (Listeria phage PSU-VKH-LP019, complete genome) position: , mismatch: 1, identity: 0.967

ggtaaaacaagcatcggcgaagcagtaaca	CRISPR spacer
ggtaaaacaagcattggcgaagcagtaaca	Protospacer
**************.***************

85. spacer 2.30|512241|30|NZ_FFHB01000002|CRISPRCasFinder,CRT,PILER-CR matches to MT668624 (Listeria phage LP-Mix_6.2, complete genome) position: , mismatch: 1, identity: 0.967

tcctaaatctgaaaacaaaaactacgagtt	CRISPR spacer
tcctaaatctgaaaacaaaaattacgagtt	Protospacer
*********************.********

86. spacer 2.30|512241|30|NZ_FFHB01000002|CRISPRCasFinder,CRT,PILER-CR matches to MT178766 (Listeria virus P100plus, complete genome) position: , mismatch: 1, identity: 0.967

tcctaaatctgaaaacaaaaactacgagtt	CRISPR spacer
tccaaaatctgaaaacaaaaactacgagtt	Protospacer
*** **************************

87. spacer 2.30|512241|30|NZ_FFHB01000002|CRISPRCasFinder,CRT,PILER-CR matches to NC_025440 (Listeria phage WIL-1, complete genome) position: , mismatch: 1, identity: 0.967

tcctaaatctgaaaacaaaaactacgagtt	CRISPR spacer
tcctaaatctgaaaacaaaaattacgagtt	Protospacer
*********************.********

88. spacer 2.30|512241|30|NZ_FFHB01000002|CRISPRCasFinder,CRT,PILER-CR matches to NC_047872 (Listeria phage LMTA-94, complete genome) position: , mismatch: 1, identity: 0.967

tcctaaatctgaaaacaaaaactacgagtt	CRISPR spacer
tcctaaatctgaaaacaaaaattacgagtt	Protospacer
*********************.********

89. spacer 2.30|512241|30|NZ_FFHB01000002|CRISPRCasFinder,CRT,PILER-CR matches to DQ003638 (Listeria phage A511, complete genome) position: , mismatch: 1, identity: 0.967

tcctaaatctgaaaacaaaaactacgagtt	CRISPR spacer
tcctaaatctgaaaacaaaaattacgagtt	Protospacer
*********************.********

90. spacer 2.30|512241|30|NZ_FFHB01000002|CRISPRCasFinder,CRT,PILER-CR matches to MT178767 (Listeria virus P200, complete genome) position: , mismatch: 1, identity: 0.967

tcctaaatctgaaaacaaaaactacgagtt	CRISPR spacer
tccaaaatctgaaaacaaaaactacgagtt	Protospacer
*** **************************

91. spacer 2.30|512241|30|NZ_FFHB01000002|CRISPRCasFinder,CRT,PILER-CR matches to KJ591605 (Listeria phage LMTA-57, complete genome) position: , mismatch: 1, identity: 0.967

tcctaaatctgaaaacaaaaactacgagtt	CRISPR spacer
tccaaaatctgaaaacaaaaactacgagtt	Protospacer
*** **************************

92. spacer 2.30|512241|30|NZ_FFHB01000002|CRISPRCasFinder,CRT,PILER-CR matches to MN128594 (Listeria phage LP-066, complete genome) position: , mismatch: 1, identity: 0.967

tcctaaatctgaaaacaaaaactacgagtt	CRISPR spacer
tcctaaatctgaaaacaaaaattacgagtt	Protospacer
*********************.********

93. spacer 2.30|512241|30|NZ_FFHB01000002|CRISPRCasFinder,CRT,PILER-CR matches to NC_042048 (Listeria phage LMTA-34, complete genome) position: , mismatch: 1, identity: 0.967

tcctaaatctgaaaacaaaaactacgagtt	CRISPR spacer
tcctaaatctgaaaacaaaaattacgagtt	Protospacer
*********************.********

94. spacer 2.30|512241|30|NZ_FFHB01000002|CRISPRCasFinder,CRT,PILER-CR matches to MK792752 (UNVERIFIED: Listera phage vB-LmoM-SH3-3, complete genome) position: , mismatch: 1, identity: 0.967

tcctaaatctgaaaacaaaaactacgagtt	CRISPR spacer
tcctaaatctgaaaacaaaaattacgagtt	Protospacer
*********************.********

95. spacer 2.30|512241|30|NZ_FFHB01000002|CRISPRCasFinder,CRT,PILER-CR matches to NC_041862 (Listeria phage LP-064, complete genome) position: , mismatch: 1, identity: 0.967

tcctaaatctgaaaacaaaaactacgagtt	CRISPR spacer
tcctaaatctgaaaacaaaaattacgagtt	Protospacer
*********************.********

96. spacer 2.30|512241|30|NZ_FFHB01000002|CRISPRCasFinder,CRT,PILER-CR matches to KJ094030 (Listeria phage LP-083-2, complete genome) position: , mismatch: 1, identity: 0.967

tcctaaatctgaaaacaaaaactacgagtt	CRISPR spacer
tcctaaatctgaaaacaaaaattacgagtt	Protospacer
*********************.********

97. spacer 2.30|512241|30|NZ_FFHB01000002|CRISPRCasFinder,CRT,PILER-CR matches to JX126918 (Listeria phage LP-125, complete genome) position: , mismatch: 1, identity: 0.967

tcctaaatctgaaaacaaaaactacgagtt	CRISPR spacer
tcctaaatctgaaaacaaaaattacgagtt	Protospacer
*********************.********

98. spacer 2.30|512241|30|NZ_FFHB01000002|CRISPRCasFinder,CRT,PILER-CR matches to NC_024360 (Listeria phage LMSP-25, complete genome) position: , mismatch: 1, identity: 0.967

tcctaaatctgaaaacaaaaactacgagtt	CRISPR spacer
tcctaaatctgaaaacaaaaattacgagtt	Protospacer
*********************.********

99. spacer 2.30|512241|30|NZ_FFHB01000002|CRISPRCasFinder,CRT,PILER-CR matches to KJ094031 (Listeria phage LP-124, complete genome) position: , mismatch: 1, identity: 0.967

tcctaaatctgaaaacaaaaactacgagtt	CRISPR spacer
tcctaaatctgaaaacaaaaattacgagtt	Protospacer
*********************.********

100. spacer 2.37|512704|30|NZ_FFHB01000002|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR134403 (Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence) position: , mismatch: 1, identity: 0.967

ttgggcaaaatgaccgtaataaatccattc	CRISPR spacer
ttgagcaaaatgaccgtaataaatccattc	Protospacer
***.**************************

101. spacer 2.2|510392|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to MN904502 (Listeria phage LP-018, complete genome) position: , mismatch: 2, identity: 0.933

gatagtagtataataactgtgctaatatgg	CRISPR spacer
gatagtagtataataactgtgctaaaatag	Protospacer
************************* **.*

102. spacer 2.7|510722|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to KJ668718 (Listeria phage LMTA-34 hypothetical proteins and DNA modification protein genes, complete cds) position: , mismatch: 2, identity: 0.933

attgtacaaattccaagtaactcatcatta	CRISPR spacer
attgtacaaattccaagtaactcatcctca	Protospacer
************************** *.*

103. spacer 2.7|510722|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to MT178766 (Listeria virus P100plus, complete genome) position: , mismatch: 2, identity: 0.933

attgtacaaattccaagtaactcatcatta	CRISPR spacer
attgtacaaatcccaagtaactcatcatca	Protospacer
***********.****************.*

104. spacer 2.7|510722|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NC_025440 (Listeria phage WIL-1, complete genome) position: , mismatch: 2, identity: 0.933

attgtacaaattccaagtaactcatcatta	CRISPR spacer
attgtacaaatcccaagtaactcatcatca	Protospacer
***********.****************.*

105. spacer 2.7|510722|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to MT178767 (Listeria virus P200, complete genome) position: , mismatch: 2, identity: 0.933

attgtacaaattccaagtaactcatcatta	CRISPR spacer
attgtacaaatcccaagtaactcatcatca	Protospacer
***********.****************.*

106. spacer 2.7|510722|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to KJ591605 (Listeria phage LMTA-57, complete genome) position: , mismatch: 2, identity: 0.933

attgtacaaattccaagtaactcatcatta	CRISPR spacer
attgtacaaatcccaagtaactcatcatca	Protospacer
***********.****************.*

107. spacer 2.9|510854|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to KP399678 (Listeria phage vB_LmoS_293, complete genome) position: , mismatch: 2, identity: 0.933

taactttagatactgctaaagaattagcaa	CRISPR spacer
tgactttagacactgctaaagaattagcaa	Protospacer
*.********.*******************

108. spacer 2.17|511383|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NC_003216 (Listeria phage A118, complete genome) position: , mismatch: 2, identity: 0.933

tcctcagataaggtttagtacgcaagactc	CRISPR spacer
tcctcagataaaatttagtacgcaagactc	Protospacer
***********..*****************

109. spacer 2.17|511383|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to AJ242593 (Bacteriophage A118 complete genome) position: , mismatch: 2, identity: 0.933

tcctcagataaggtttagtacgcaagactc	CRISPR spacer
tcctcagataaaatttagtacgcaagactc	Protospacer
***********..*****************

110. spacer 2.19|511515|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to MN114083 (Listeria phage LP-013, complete genome) position: , mismatch: 2, identity: 0.933

caatgcttggggctatgatggcatggataa	CRISPR spacer
caatgcttggggatatgatggaatggataa	Protospacer
************ ******** ********

111. spacer 2.19|511515|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to MN114082 (Listeria phage LP-010, complete genome) position: , mismatch: 2, identity: 0.933

caatgcttggggctatgatggcatggataa	CRISPR spacer
caatgcttggggatatgatggaatggataa	Protospacer
************ ******** ********

112. spacer 2.26|511977|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to MN172529 (Listeria phage LP-039, complete genome) position: , mismatch: 2, identity: 0.933

agtatttattatctctattacttttgtata	CRISPR spacer
agtgtttattatctctattacgtttgtata	Protospacer
***.***************** ********

113. spacer 2.26|511977|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to MN172529 (Listeria phage LP-039, complete genome) position: , mismatch: 2, identity: 0.933

agtatttattatctctattacttttgtata	CRISPR spacer
agtgtttattatctctattacgtttgtata	Protospacer
***.***************** ********

114. spacer 2.26|511977|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to MT668624 (Listeria phage LP-Mix_6.2, complete genome) position: , mismatch: 2, identity: 0.933

agtatttattatctctattacttttgtata	CRISPR spacer
agtgtttattatctctattacgtttgtata	Protospacer
***.***************** ********

115. spacer 2.26|511977|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to MT668624 (Listeria phage LP-Mix_6.2, complete genome) position: , mismatch: 2, identity: 0.933

agtatttattatctctattacttttgtata	CRISPR spacer
agtgtttattatctctattacgtttgtata	Protospacer
***.***************** ********

116. spacer 2.26|511977|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to KJ094033 (Listeria phage LP-048, complete genome) position: , mismatch: 2, identity: 0.933

agtatttattatctctattacttttgtata	CRISPR spacer
agtgtttattatctctattacgtttgtata	Protospacer
***.***************** ********

117. spacer 2.27|512043|30|NZ_FFHB01000002|CRISPRCasFinder,CRT,PILER-CR matches to KJ591605 (Listeria phage LMTA-57, complete genome) position: , mismatch: 2, identity: 0.933

cgtattcaaaagtatatccgctagcctcaa	CRISPR spacer
catattcaaaagtatatccactagcctcaa	Protospacer
*.*****************.**********

118. spacer 2.27|512043|30|NZ_FFHB01000002|CRISPRCasFinder,CRT,PILER-CR matches to NC_042048 (Listeria phage LMTA-34, complete genome) position: , mismatch: 2, identity: 0.933

cgtattcaaaagtatatccgctagcctcaa	CRISPR spacer
catattcaaaagtatatccactagcctcaa	Protospacer
*.*****************.**********

119. spacer 2.27|512043|30|NZ_FFHB01000002|CRISPRCasFinder,CRT,PILER-CR matches to NC_024360 (Listeria phage LMSP-25, complete genome) position: , mismatch: 2, identity: 0.933

cgtattcaaaagtatatccgctagcctcaa	CRISPR spacer
catattcaaaagtatatccactagcctcaa	Protospacer
*.*****************.**********

120. spacer 2.30|512241|30|NZ_FFHB01000002|CRISPRCasFinder,CRT,PILER-CR matches to KJ668718 (Listeria phage LMTA-34 hypothetical proteins and DNA modification protein genes, complete cds) position: , mismatch: 2, identity: 0.933

tcctaaatctgaaaacaaaaactacgagtt	CRISPR spacer
tccaaaatctgaaaacaaaaattacgagtt	Protospacer
*** *****************.********

121. spacer 2.30|512241|30|NZ_FFHB01000002|CRISPRCasFinder,CRT,PILER-CR matches to JQ797329 (Listeria phage vB_LmoM_AG20, complete genome) position: , mismatch: 2, identity: 0.933

tcctaaatctgaaaacaaaaactacgagtt	CRISPR spacer
tccaaaatctgagaacaaaaactacgagtt	Protospacer
*** ********.*****************

122. spacer 2.2|510392|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to JB137888 (Sequence 7 from Patent WO2012159774) position: , mismatch: 3, identity: 0.9

gatagtagtataataactgtgctaatatgg	CRISPR spacer
gatagtagtataataacagtactaatatag	Protospacer
***************** **.*******.*

123. spacer 2.7|510722|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to MK792752 (UNVERIFIED: Listera phage vB-LmoM-SH3-3, complete genome) position: , mismatch: 3, identity: 0.9

attgtacaaattccaagtaactcatcatta	CRISPR spacer
attgtacaaatcccaagtaactcatcacca	Protospacer
***********.***************..*

124. spacer 2.7|510722|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NC_047872 (Listeria phage LMTA-94, complete genome) position: , mismatch: 3, identity: 0.9

attgtacaaattccaagtaactcatcatta	CRISPR spacer
attgtacaaatcccaagtaactcgtcatca	Protospacer
***********.***********.****.*

125. spacer 2.7|510722|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NC_042048 (Listeria phage LMTA-34, complete genome) position: , mismatch: 3, identity: 0.9

attgtacaaattccaagtaactcatcatta	CRISPR spacer
attgtacaaatcccaagtaactcgtcatca	Protospacer
***********.***********.****.*

126. spacer 2.7|510722|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NC_024360 (Listeria phage LMSP-25, complete genome) position: , mismatch: 3, identity: 0.9

attgtacaaattccaagtaactcatcatta	CRISPR spacer
attgtacaaatcccaagtaactcgtcatca	Protospacer
***********.***********.****.*

127. spacer 2.9|510854|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to KP399677 (Listeria phage vB_LmoS_188, complete genome) position: , mismatch: 3, identity: 0.9

taactttagatactgctaaagaattagcaa	CRISPR spacer
taactttagacactgctaaggaattagcga	Protospacer
**********.********.********.*

128. spacer 2.19|511515|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to MH299806 (Listeria phage LP-KV022, complete genome) position: , mismatch: 3, identity: 0.9

caatgcttggggctatgatggcatggataa	CRISPR spacer
taatgcttggggatatgatggaatggataa	Protospacer
.*********** ******** ********

129. spacer 2.19|511515|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to JB137888 (Sequence 7 from Patent WO2012159774) position: , mismatch: 3, identity: 0.9

caatgcttggggctatgatggcatggataa	CRISPR spacer
taatgcgtggggatatgatggcatggataa	Protospacer
.***** ***** *****************

130. spacer 2.19|511515|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NC_021785 (Listeria phage LP-110, complete genome) position: , mismatch: 3, identity: 0.9

caatgcttggggctatgatggcatggataa	CRISPR spacer
taatgcttggggatatgatggaatggataa	Protospacer
.*********** ******** ********

131. spacer 2.27|512043|30|NZ_FFHB01000002|CRISPRCasFinder,CRT,PILER-CR matches to KJ668716 (Listeria phage LMTA-34 hypothetical protein genes, complete cds) position: , mismatch: 3, identity: 0.9

cgtattcaaaagtatatccgctagcctcaa	CRISPR spacer
catattcaaaagtatacccactagcctcaa	Protospacer
*.**************.**.**********

132. spacer 2.27|512043|30|NZ_FFHB01000002|CRISPRCasFinder,CRT,PILER-CR matches to NC_025440 (Listeria phage WIL-1, complete genome) position: , mismatch: 3, identity: 0.9

cgtattcaaaagtatatccgctagcctcaa	CRISPR spacer
catattcaaaagtatacccgctagcctcga	Protospacer
*.**************.***********.*

133. spacer 2.27|512043|30|NZ_FFHB01000002|CRISPRCasFinder,CRT,PILER-CR matches to DQ003638 (Listeria phage A511, complete genome) position: , mismatch: 3, identity: 0.9

cgtattcaaaagtatatccgctagcctcaa	CRISPR spacer
catattcaaaagtatacccgctagcctcga	Protospacer
*.**************.***********.*

134. spacer 2.27|512043|30|NZ_FFHB01000002|CRISPRCasFinder,CRT,PILER-CR matches to MN128594 (Listeria phage LP-066, complete genome) position: , mismatch: 3, identity: 0.9

cgtattcaaaagtatatccgctagcctcaa	CRISPR spacer
catattcaaaagtatacccgctagcctcga	Protospacer
*.**************.***********.*

135. spacer 2.27|512043|30|NZ_FFHB01000002|CRISPRCasFinder,CRT,PILER-CR matches to KJ094030 (Listeria phage LP-083-2, complete genome) position: , mismatch: 3, identity: 0.9

cgtattcaaaagtatatccgctagcctcaa	CRISPR spacer
catattcaaaagtatacccgctagcctcga	Protospacer
*.**************.***********.*

136. spacer 2.27|512043|30|NZ_FFHB01000002|CRISPRCasFinder,CRT,PILER-CR matches to KT319598 (UNVERIFIED: Listeria phage WIL-2 genomic sequence) position: , mismatch: 3, identity: 0.9

cgtattcaaaagtatatccgctagcctcaa	CRISPR spacer
catattcaaaagtatacccgctagcctcga	Protospacer
*.**************.***********.*

137. spacer 2.27|512043|30|NZ_FFHB01000002|CRISPRCasFinder,CRT,PILER-CR matches to KJ094031 (Listeria phage LP-124, complete genome) position: , mismatch: 3, identity: 0.9

cgtattcaaaagtatatccgctagcctcaa	CRISPR spacer
catattcaaaagtatacccgctagcctcga	Protospacer
*.**************.***********.*

138. spacer 2.7|510722|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to MT668624 (Listeria phage LP-Mix_6.2, complete genome) position: , mismatch: 4, identity: 0.867

attgtacaaattccaagtaactcatcatta	CRISPR spacer
attgtacaaatcccaagtaactcattgtca	Protospacer
***********.*************..*.*

139. spacer 2.7|510722|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to MN128594 (Listeria phage LP-066, complete genome) position: , mismatch: 4, identity: 0.867

attgtacaaattccaagtaactcatcatta	CRISPR spacer
attgtacaaatcccaagtaactcattgtca	Protospacer
***********.*************..*.*

140. spacer 2.7|510722|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NC_041862 (Listeria phage LP-064, complete genome) position: , mismatch: 4, identity: 0.867

attgtacaaattccaagtaactcatcatta	CRISPR spacer
attgtacaaatcccaagtaactcattgtca	Protospacer
***********.*************..*.*

141. spacer 2.7|510722|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to KJ094030 (Listeria phage LP-083-2, complete genome) position: , mismatch: 4, identity: 0.867

attgtacaaattccaagtaactcatcatta	CRISPR spacer
attgtacaaatcccaagtaactcattgtca	Protospacer
***********.*************..*.*

142. spacer 2.7|510722|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to JX126918 (Listeria phage LP-125, complete genome) position: , mismatch: 4, identity: 0.867

attgtacaaattccaagtaactcatcatta	CRISPR spacer
attgtacaaatcccaagtaactcattgtca	Protospacer
***********.*************..*.*

143. spacer 2.7|510722|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to KJ094031 (Listeria phage LP-124, complete genome) position: , mismatch: 4, identity: 0.867

attgtacaaattccaagtaactcatcatta	CRISPR spacer
attgtacaaatcccaagtaactcattgtca	Protospacer
***********.*************..*.*

144. spacer 2.9|510854|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NC_020157 (Anabaena cylindrica PCC 7122 plasmid pANACY.02, complete sequence) position: , mismatch: 4, identity: 0.867

taactt--tagatactgctaaagaattagcaa	CRISPR spacer
--actttgtagatactgctacacaattagcaa	Protospacer
  ****  ************ * *********

145. spacer 2.19|511515|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to KJ094026 (Listeria phage LP-032 contig 3, partial genome) position: , mismatch: 5, identity: 0.833

caatgcttggggctatgatggcatggataa	CRISPR spacer
caatgcttggggttatgatggaatgaaaga	Protospacer
************.******** ***.* .*

146. spacer 2.19|511515|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to MN128593 (Listeria phage LP-031, complete genome) position: , mismatch: 5, identity: 0.833

caatgcttggggctatgatggcatggataa	CRISPR spacer
caatgcttggggttatgatggaatgaaaga	Protospacer
************.******** ***.* .*

147. spacer 2.19|511515|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NC_021787 (Listeria phage LP-037, complete genome) position: , mismatch: 5, identity: 0.833

caatgcttggggctatgatggcatggataa	CRISPR spacer
caatgcttggggttatgatggaatgaaaga	Protospacer
************.******** ***.* .*

148. spacer 2.19|511515|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to MN904502 (Listeria phage LP-018, complete genome) position: , mismatch: 5, identity: 0.833

caatgcttggggctatgatggcatggataa	CRISPR spacer
caatgcttggggttatgatggaatgaaaga	Protospacer
************.******** ***.* .*

149. spacer 2.19|511515|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to JX442241 (Listeria phage P70, complete genome) position: , mismatch: 5, identity: 0.833

caatgcttggggctatgatggcatggataa	CRISPR spacer
caatgcttggggttatgatggaatgaaaga	Protospacer
************.******** ***.* .*

150. spacer 2.19|511515|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to KJ094020 (Listeria phage LP-026, complete genome) position: , mismatch: 5, identity: 0.833

caatgcttggggctatgatggcatggataa	CRISPR spacer
caatgcttggggttatgatggaatgaaaga	Protospacer
************.******** ***.* .*

151. spacer 2.19|511515|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to KJ094021 (Listeria phage LP-114, complete genome) position: , mismatch: 5, identity: 0.833

caatgcttggggctatgatggcatggataa	CRISPR spacer
caatgcttggggttatgatggaatgaaaga	Protospacer
************.******** ***.* .*

152. spacer 2.26|511977|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NC_013373 (Staphylococcus sp. CDC3 plasmid SAP020A, complete sequence) position: , mismatch: 5, identity: 0.833

-agtatttattatctctattacttttgtata	CRISPR spacer
tagt-tttattatctctattattttagtctt	Protospacer
 *** ****************.*** ** *

153. spacer 2.9|510854|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NZ_LR215032 (Mycoplasma gallopavonis strain NCTC10186 plasmid 2) position: , mismatch: 6, identity: 0.8

taactttagatactgctaaagaattagcaa	CRISPR spacer
aaattagagatactgctaaaaaattaggaa	Protospacer
 **.*  *************.****** **

154. spacer 2.15|511251|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NZ_CP014203 (Clostridium baratii strain CDC51267 plasmid pNPD11_1, complete sequence) position: , mismatch: 6, identity: 0.8

atatgggggcttattgtatggctaatatac	CRISPR spacer
ctatgggggcatatggtatggctaagaaag	Protospacer
 ********* *** ********** * *

155. spacer 2.15|511251|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NC_004574 (Ruegeria sp. PR1b plasmid pSD25, complete sequence) position: , mismatch: 6, identity: 0.8

atatgggggcttattgtatggctaatatac	CRISPR spacer
ctatgggggcttattgcatggcgattttgc	Protospacer
 ***************.***** * * *.*

156. spacer 2.17|511383|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NZ_CP023068 (Ensifer sojae CCBAU 05684 plasmid pSJ05684b, complete sequence) position: , mismatch: 6, identity: 0.8

tcctcagataaggtttagtacgcaagactc	CRISPR spacer
tcctcagataaggtgtcgtacgcaaatccg	Protospacer
************** * ********. *.

157. spacer 2.22|511713|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NZ_CP021170 (Paenibacillus bovis strain BD3526 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.8

ccagagtcgctttttcttccggccagtctg--	CRISPR spacer
ccagattcgctttttcttccagc--gtccatt	Protospacer
***** **************.**  ***..

158. spacer 2.26|511977|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NZ_CP031989 (Acinetobacter haemolyticus strain 5227 plasmid pAhaem5227b, complete sequence) position: , mismatch: 6, identity: 0.8

agtatttattatctctattacttttgtata	CRISPR spacer
tgtttctattatctctattactttctaata	Protospacer
 ** *.******************.  ***

159. spacer 2.30|512241|30|NZ_FFHB01000002|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP014867 (Bacillus thuringiensis serovar tolworthi strain Pasteur Institute Standard strain plasmid pKK3, complete sequence) position: , mismatch: 6, identity: 0.8

tcctaaatctgaaaacaaaaactacgagtt	CRISPR spacer
aactaaatctgaaaacaaaaactacataat	Protospacer
  ***********************. . *

160. spacer 2.30|512241|30|NZ_FFHB01000002|CRISPRCasFinder,CRT,PILER-CR matches to NC_011730 (Gloeothece citriformis PCC 7424 plasmid pP742403, complete sequence) position: , mismatch: 6, identity: 0.8

tcctaaatctgaaaacaaaaactacgagtt	CRISPR spacer
ttctaaatctcaaaacaaaaactcccgttt	Protospacer
*.******** ************ * . **

161. spacer 2.9|510854|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NC_022774 (Bacillus phage Slash, complete genome) position: , mismatch: 7, identity: 0.767

taactttagatactgctaaagaattagcaa	CRISPR spacer
aaactttagatgctgctaaacaattccgca	Protospacer
 **********.******** ****    *

162. spacer 2.9|510854|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to KT345706 (Vibrio phage vB_VorS-PVo5, complete genome) position: , mismatch: 7, identity: 0.767

taactttagatactgctaaagaattagcaa	CRISPR spacer
ttgatttagatactgctaaacaattactta	Protospacer
* . **************** ***** . *

163. spacer 2.9|510854|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to MN693549 (Marine virus AFVG_25M89, complete genome) position: , mismatch: 7, identity: 0.767

taactttagatactgctaaagaattagcaa	CRISPR spacer
attgttcagatgctgctaaagaattagcta	Protospacer
    **.****.**************** *

164. spacer 2.9|510854|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to AP014070 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C2-MedDCM-OCT-S42-C71, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 7, identity: 0.767

taactttagatactgctaaagaattagcaa	CRISPR spacer
aaactttagctactgctaaagagtatgaca	Protospacer
 ******** ************.*  *  *

165. spacer 2.9|510854|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to AP014069 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C2-MedDCM-OCT-S40-C35, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 7, identity: 0.767

taactttagatactgctaaagaattagcaa	CRISPR spacer
aaactttagctactgctaaagagtatgaca	Protospacer
 ******** ************.*  *  *

166. spacer 2.21|511647|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to MN694303 (Marine virus AFVG_250M806, complete genome) position: , mismatch: 7, identity: 0.767

cttttgtgtcttcggtagctttgtccatta-	CRISPR spacer
ctttagtgtcttcgatagctttg-atgtcac	Protospacer
**** *********.********  ..*.*

167. spacer 2.22|511713|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NZ_CP049249 (Rhizobium rhizoryzae strain DSM 29514 plasmid unnamed3, complete sequence) position: , mismatch: 7, identity: 0.767

ccagagtcgctttttcttccggccagtctg	CRISPR spacer
ctagaggcgctttttcttccggccttattc	Protospacer
*.**** *****************   .*

168. spacer 2.26|511977|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NC_008226 (Clostridioides difficile 630 plasmid pCD630, complete sequence) position: , mismatch: 7, identity: 0.767

agtatttattatctctattacttttgtata	CRISPR spacer
attatttagtatctctattactttcccaat	Protospacer
* ****** ***************. .*

169. spacer 2.26|511977|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NZ_CP016319 (Clostridioides difficile strain 630 delta erm plasmid pCD630, complete sequence) position: , mismatch: 7, identity: 0.767

agtatttattatctctattacttttgtata	CRISPR spacer
attatttagtatctctattactttcccaat	Protospacer
* ****** ***************. .*

170. spacer 2.26|511977|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NZ_MG019959 (Clostridioides difficile isolate ERR017368_NODE12 plasmid pCD-WTSI1, complete sequence) position: , mismatch: 7, identity: 0.767

agtatttattatctctattacttttgtata	CRISPR spacer
attatttagtatctctattactttcccaat	Protospacer
* ****** ***************. .*

171. spacer 2.26|511977|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NZ_MG019961 (Clostridioides difficile isolate ERR125910_NODE5 plasmid pCD-WTSI3, complete sequence) position: , mismatch: 7, identity: 0.767

agtatttattatctctattacttttgtata	CRISPR spacer
attatttagtatctctattactttcccaat	Protospacer
* ****** ***************. .*

172. spacer 2.26|511977|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NZ_MG019962 (Clostridioides difficile isolate ERR125911_NODE11 plasmid pCD-WTSI4, complete sequence) position: , mismatch: 7, identity: 0.767

agtatttattatctctattacttttgtata	CRISPR spacer
attatttagtatctctattactttcccaat	Protospacer
* ****** ***************. .*

173. spacer 2.26|511977|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NZ_MG019960 (Clostridioides difficile isolate ERR022513_NODE32 plasmid pCD-WTSI2, complete sequence) position: , mismatch: 7, identity: 0.767

agtatttattatctctattacttttgtata	CRISPR spacer
attatttagtatctctattactttcccaat	Protospacer
* ****** ***************. .*

174. spacer 2.26|511977|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NZ_MG266000 (Clostridioides difficile strain 7032985 plasmid pCD-ISS1, complete sequence) position: , mismatch: 7, identity: 0.767

agtatttattatctctattacttttgtata	CRISPR spacer
attatttagtatctctattactttcccaat	Protospacer
* ****** ***************. .*

175. spacer 2.26|511977|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NZ_CP017574 (Bacillus thuringiensis strain SCG04-02 plasmid PSCG364, complete sequence) position: , mismatch: 7, identity: 0.767

agtatttattatctctattacttttgtata	CRISPR spacer
catatttataatctctattattttttcatt	Protospacer
 .******* **********.**** .**

176. spacer 2.26|511977|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NZ_CP012100 (Bacillus thuringiensis strain HS18-1 plasmid pHS18-1, complete sequence) position: , mismatch: 7, identity: 0.767

agtatttattatctctattacttttgtata	CRISPR spacer
catatttataatctctattattttttcatt	Protospacer
 .******* **********.**** .**

177. spacer 2.26|511977|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NC_008014 (Lawsonia intracellularis PHE/MN1-00 plasmid 3, complete sequence) position: , mismatch: 7, identity: 0.767

agtatttattatctctattacttttgtata	CRISPR spacer
tttacttattatctctattatttttatttt	Protospacer
  **.***************.****.* *

178. spacer 2.26|511977|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NC_020130 (Lawsonia intracellularis N343 plasmid 3, complete sequence) position: , mismatch: 7, identity: 0.767

agtatttattatctctattacttttgtata	CRISPR spacer
tttacttattatctctattatttttatttt	Protospacer
  **.***************.****.* *

179. spacer 2.27|512043|30|NZ_FFHB01000002|CRISPRCasFinder,CRT,PILER-CR matches to NC_019388 (Thermus oshimai JL-2 plasmid pTHEOS02, complete sequence) position: , mismatch: 7, identity: 0.767

cgtattcaaaagtatatccgctagcctcaa	CRISPR spacer
tccaaacaaaagtataaccgctagcctaaa	Protospacer
. .*  ********** ********** **

180. spacer 2.27|512043|30|NZ_FFHB01000002|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010824 (Thermus aquaticus Y51MC23 plasmid pTA16, complete sequence) position: , mismatch: 7, identity: 0.767

cgtattcaaaagtatatccgctagcctcaa	CRISPR spacer
tccaaacaaaagtataaccgctagcctaaa	Protospacer
. .*  ********** ********** **

181. spacer 2.30|512241|30|NZ_FFHB01000002|CRISPRCasFinder,CRT,PILER-CR matches to NC_021793 (Cellulophaga phage phi48:2, complete genome) position: , mismatch: 7, identity: 0.767

tcctaaatctgaaaacaaaaactacgagtt	CRISPR spacer
ttctaaatctgaaaacaacaactatagaat	Protospacer
*.**************** *****.... *

182. spacer 2.30|512241|30|NZ_FFHB01000002|CRISPRCasFinder,CRT,PILER-CR matches to HQ683709 (Planktothrix phage PaV-LD, complete genome) position: , mismatch: 7, identity: 0.767

tcctaaatctgaaaacaaaaa-----ctacgagtt	CRISPR spacer
tcctaaatctgaaaccaaaaaggaacttac-----	Protospacer
************** ******     .***

183. spacer 2.30|512241|30|NZ_FFHB01000002|CRISPRCasFinder,CRT,PILER-CR matches to HQ683709 (Planktothrix phage PaV-LD, complete genome) position: , mismatch: 7, identity: 0.767

tcctaaatctgaaaacaaaaa-----ctacgagtt	CRISPR spacer
tcctaaatctgaaaccaaaaaagaacccac-----	Protospacer
************** ******     *.**

184. spacer 2.30|512241|30|NZ_FFHB01000002|CRISPRCasFinder,CRT,PILER-CR matches to MF417937 (Uncultured Caudovirales phage clone 10F_6, partial genome) position: , mismatch: 7, identity: 0.767

tcctaaatctgaaaacaaaaactacgagtt	CRISPR spacer
aactaaatctgaaactaaaaactacaactc	Protospacer
  ************ .*********.* *.

185. spacer 2.1|510326|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NZ_CP040765 (Paracoccus sp. 2251 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733

gcaatagaccagttaggtgtcacaggtgcg	CRISPR spacer
gccatagaccagttcggtgtcactcagccc	Protospacer
** *********** ********  .  *

186. spacer 2.5|510590|30|NZ_FFHB01000002|CRISPRCasFinder,CRT,PILER-CR matches to NC_012970 (Methylovorus glucosetrophus SIP3-4 plasmid pMsip01, complete sequence) position: , mismatch: 8, identity: 0.733

aaatattattcaatgctgtaactgtaaaag	CRISPR spacer
taatatttttcaatgctgcaactgctgtcg	Protospacer
 ****** **********.*****. .  *

187. spacer 2.5|510590|30|NZ_FFHB01000002|CRISPRCasFinder,CRT,PILER-CR matches to MN552143 (Lactococcus phage P1046, complete genome) position: , mismatch: 8, identity: 0.733

aaatattattcaatgctgtaactgtaaaag	CRISPR spacer
ctaatctattcaatgcagtaactgtaactg	Protospacer
  *  .********** **********  *

188. spacer 2.5|510590|30|NZ_FFHB01000002|CRISPRCasFinder,CRT,PILER-CR matches to NC_010576 (Lactococcus phage 1706, complete genome) position: , mismatch: 8, identity: 0.733

aaatattattcaatgctgtaactgtaaaag	CRISPR spacer
ctaatctattcaatgcagtaactgtaactg	Protospacer
  *  .********** **********  *

189. spacer 2.5|510590|30|NZ_FFHB01000002|CRISPRCasFinder,CRT,PILER-CR matches to MK779875 (Lactococcus phage CHPC971, complete genome) position: , mismatch: 8, identity: 0.733

aaatattattcaatgctgtaactgtaaaag	CRISPR spacer
ctaatctattcaatgcagtaactgtaactg	Protospacer
  *  .********** **********  *

190. spacer 2.8|510788|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to MN035989 (Leviviridae sp. isolate H3_Bulk_41_scaffold_462 RNA-dependent RNA polymerase (H3Bulk41462_000001), hypothetical protein (H3Bulk41462_000002), hypothetical protein (H3Bulk41462_000003), and hypothetical protein (H3Bulk41462_000004) genes, complete cds) position: , mismatch: 8, identity: 0.733

------tttttcacgtttgtactgtctctcctcgta	CRISPR spacer
gggaaat------cgtttctactgtctctcttcgta	Protospacer
      *      ***** ***********.*****

191. spacer 2.9|510854|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NZ_CP017574 (Bacillus thuringiensis strain SCG04-02 plasmid PSCG364, complete sequence) position: , mismatch: 8, identity: 0.733

taactttagatactgctaaagaattagcaa	CRISPR spacer
taactttagatactgttaaagcacatgggg	Protospacer
***************.***** *.  * ..

192. spacer 2.9|510854|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NZ_CP031992 (Acinetobacter haemolyticus strain 2126ch plasmid pAhaem2126chf, complete sequence) position: , mismatch: 8, identity: 0.733

taactttagatactgctaaagaattagcaa	CRISPR spacer
cagaagaagatgcttctaaagaattagcaa	Protospacer
.*.    ****.** ***************

193. spacer 2.9|510854|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NZ_CP010111 (Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-5, complete sequence) position: , mismatch: 8, identity: 0.733

taactttagatactgctaaagaattagcaa	CRISPR spacer
taactttagatactgttaaagcacatgggg	Protospacer
***************.***** *.  * ..

194. spacer 2.9|510854|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NZ_CP026415 (Acinetobacter sp. ACNIH2 plasmid pACI-55cf, complete sequence) position: , mismatch: 8, identity: 0.733

taactttagatactgctaaagaattagcaa	CRISPR spacer
cagaagaagatgcttctaaagaattagcaa	Protospacer
.*.    ****.** ***************

195. spacer 2.9|510854|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NZ_CP018872 (Acinetobacter haemolyticus strain TJS01 plasmid pAHTJS1, complete sequence) position: , mismatch: 8, identity: 0.733

taactttagatactgctaaagaattagcaa	CRISPR spacer
cagaagaagatgcttctaaagaattagcaa	Protospacer
.*.    ****.** ***************

196. spacer 2.9|510854|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to MH319731 (Marine virus AG-345-E02 Ga0172268_11 genomic sequence) position: , mismatch: 8, identity: 0.733

taactttagatactgctaaagaattagcaa	CRISPR spacer
atatattagatactgctaaaaaattaagac	Protospacer
  *. ***************.*****. *

197. spacer 2.9|510854|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to MN694545 (Marine virus AFVG_250M894, complete genome) position: , mismatch: 8, identity: 0.733

taactttagatactgctaaagaattagcaa	CRISPR spacer
catctttagagactgctaaacaattaatgg	Protospacer
.* ******* ********* *****....

198. spacer 2.10|510920|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to AP017924 (Ralstonia phage RP12 DNA, complete genome) position: , mismatch: 8, identity: 0.733

tgtctgaatgtagttaatatcttcaacttg	CRISPR spacer
gctctgattgaagttaatatcttcaaggac	Protospacer
  ***** ** ***************

199. spacer 2.10|510920|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to AP017925 (Ralstonia phage RP31 DNA, complete genome) position: , mismatch: 8, identity: 0.733

tgtctgaatgtagttaatatcttcaacttg	CRISPR spacer
gctctgattgaagttaatatcttcaaggac	Protospacer
  ***** ** ***************

200. spacer 2.10|510920|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to AP014501 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S32-C4, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces) position: , mismatch: 8, identity: 0.733

tgtctgaatgtagttaatatcttcaacttg	CRISPR spacer
tagaccgatgtaattaatatcttcatcttg	Protospacer
*.  . .*****.************ ****

201. spacer 2.12|511052|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NZ_CP025513 (Neorhizobium sp. SOG26 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.733

gcgcttcagtttcagcattggtcttcttag	CRISPR spacer
tgccgtcagtgtcaccattggtcttcttca	Protospacer
   * ***** *** ************* .

202. spacer 2.13|511118|31|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NZ_CP047439 (Spiroplasma citri strain BLH-MB plasmid pSciBLHMB-2, complete sequence) position: , mismatch: 8, identity: 0.742

tctcttgcatttggttctgaataatctcgta	CRISPR spacer
aaccttgcttttggttttgaataatcttttt	Protospacer
  .***** *******.**********. *

203. spacer 2.13|511118|31|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NZ_CP047440 (Spiroplasma citri strain BLH-MB plasmid pSciBLHMB-3, complete sequence) position: , mismatch: 8, identity: 0.742

tctcttgcatttggttctgaataatctcgta	CRISPR spacer
aaccttgcttttggttttgaataatcttttt	Protospacer
  .***** *******.**********. *

204. spacer 2.20|511581|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NZ_CP017105 (Rhizobium gallicum strain IE4872 plasmid pRgalIE4872d, complete sequence) position: , mismatch: 8, identity: 0.733

ctcttttcgatattccggaagaggtactcc	CRISPR spacer
cgatgttcgatatgccggaagaggtaaggg	Protospacer
*  * ******** ************

205. spacer 2.21|511647|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to HM452126 (Aeromonas phage phiAS5, complete genome) position: , mismatch: 8, identity: 0.733

cttttgtgtcttcggtagctttgtccatta	CRISPR spacer
ggatggtgtcttcggtagctttcaccatct	Protospacer
   * *****************  ****.

206. spacer 2.25|511911|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NZ_CP009275 (Klebsiella variicola strain DX120E plasmid pKV1, complete sequence) position: , mismatch: 8, identity: 0.733

gaaataatattgataatatcgctcttgcta	CRISPR spacer
gtatcgtcattaataatatcgctcttgctg	Protospacer
* * .. .***.*****************.

207. spacer 2.25|511911|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to MT786458 (Staphylococcus phage vB_SauH_SAP1, complete genome) position: , mismatch: 8, identity: 0.733

gaaataatattgataatatcgctcttgcta	CRISPR spacer
aaggtaatattgataatatggctctaataa	Protospacer
.*..*************** ***** .. *

208. spacer 2.26|511977|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NZ_CP017256 (Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence) position: , mismatch: 8, identity: 0.733

agtatttattatctctattacttttgtata	CRISPR spacer
ctagattattaactcttttacttttgtatc	Protospacer
   . ****** **** ************

209. spacer 2.26|511977|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NZ_CP018746 (Borreliella garinii strain CIP 103362 isolate 20047 plasmid unnamed1) position: , mismatch: 8, identity: 0.733

agtatttattatctctattacttttgtata	CRISPR spacer
tttatttattatttcttttacttttacttt	Protospacer
  **********.*** ********.. *

210. spacer 2.26|511977|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NZ_CP028865 (Borreliella garinii strain 20047 plasmid lp36, complete sequence) position: , mismatch: 8, identity: 0.733

agtatttattatctctattacttttgtata	CRISPR spacer
tttatttattatttcttttacttttacttt	Protospacer
  **********.*** ********.. *

211. spacer 2.31|512307|30|NZ_FFHB01000002|CRISPRCasFinder,CRT,PILER-CR matches to NZ_HG938354 (Neorhizobium galegae bv. orientalis str. HAMBI 540 plasmid pHAMBI540a, complete sequence) position: , mismatch: 8, identity: 0.733

tattggtgccgcgattaaagtgtttgactt	CRISPR spacer
cgccggtgccgcgatcaaagcgtttgacga	Protospacer
....***********.****.*******

212. spacer 2.32|512373|30|NZ_FFHB01000002|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019039 (Bacillus velezensis strain GH1-13 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.733

aaagcaataaatcagatcataaaggagcct	CRISPR spacer
aaagcaataaaacagatcataattggatac	Protospacer
*********** **********  *... .

213. spacer 2.32|512373|30|NZ_FFHB01000002|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019234 (Bacillus thuringiensis strain YGd22-03 plasmid pYGD83, complete sequence) position: , mismatch: 8, identity: 0.733

aaagcaataaatcagatcataaaggagcct	CRISPR spacer
gtaaaaattaataagatcataaaggagcag	Protospacer
. *. *** *** ***************

214. spacer 2.34|512505|30|NZ_FFHB01000002|CRISPRCasFinder,CRT,PILER-CR matches to MH791404 (UNVERIFIED: Aeromonas phage Assk, partial genome) position: , mismatch: 8, identity: 0.733

gggcaacgatatttgtagataacagggagt	CRISPR spacer
gttatcccatatttgtatataacagggaga	Protospacer
*     * ********* ***********

215. spacer 2.34|512505|30|NZ_FFHB01000002|CRISPRCasFinder,CRT,PILER-CR matches to NC_019538 (Aeromonas phage CC2, complete genome) position: , mismatch: 8, identity: 0.733

gggcaacgatatttgtagataacagggagt	CRISPR spacer
gttatcccatatttgtatataacagggaga	Protospacer
*     * ********* ***********

216. spacer 2.39|512836|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to MN855765 (Myoviridae sp. isolate 14, complete genome) position: , mismatch: 8, identity: 0.733

agtgatggggaagagattgaacttatgttt	CRISPR spacer
gctgatgggaaagaggttgaacttaaaggt	Protospacer
. *******.*****.********* .  *

217. spacer 2.20|511581|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NZ_CP045296 (Paenibacillus cellulositrophicus strain KACC 16577 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

ctcttttcgatattccggaagaggtactcc	CRISPR spacer
aatttttcgatattccggatgaggaatggt	Protospacer
  .**************** **** *.  .

218. spacer 2.21|511647|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to MN393079 (Salmonella virus VSiA, complete genome) position: , mismatch: 9, identity: 0.7

cttttgtgtcttcggtagctttgtccatta	CRISPR spacer
gcattgtgtcttcggttgctttgtattcga	Protospacer
 . ************* ******* . . *

219. spacer 2.21|511647|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to MH424444 (Salmonella virus VSiP, complete genome) position: , mismatch: 9, identity: 0.7

cttttgtgtcttcggtagctttgtccatta	CRISPR spacer
gcattgtgtcttcggttgctttgtattcga	Protospacer
 . ************* ******* . . *

220. spacer 2.26|511977|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NZ_CP039210 (Piscirickettsia salmonis strain Psal-103 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

agtatttattatctctattacttttgtata	CRISPR spacer
gtctttttttatatctattacttttgtgag	Protospacer
. . *** **** **************. .

221. spacer 2.26|511977|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NZ_CP048067 (Piscirickettsia salmonis strain Ps-8079A plasmid Ps8079A-p1, complete sequence) position: , mismatch: 9, identity: 0.7

agtatttattatctctattacttttgtata	CRISPR spacer
gtctttttttatatctattacttttgtgag	Protospacer
. . *** **** **************. .

222. spacer 2.26|511977|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NZ_CP039033 (Piscirickettsia salmonis strain Psal-070 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

agtatttattatctctattacttttgtata	CRISPR spacer
gtctttttttatatctattacttttgtgag	Protospacer
. . *** **** **************. .

223. spacer 2.26|511977|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NZ_CP038894 (Piscirickettsia salmonis strain Psal-006a plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

agtatttattatctctattacttttgtata	CRISPR spacer
gtctttttttatatctattacttttgtgag	Protospacer
. . *** **** **************. .

224. spacer 2.26|511977|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NZ_CP038924 (Piscirickettsia salmonis strain Psal-011 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

agtatttattatctctattacttttgtata	CRISPR spacer
gtctttttttatatctattacttttgtgag	Protospacer
. . *** **** **************. .

225. spacer 2.26|511977|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NZ_CP038953 (Piscirickettsia salmonis strain Psal-040 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

agtatttattatctctattacttttgtata	CRISPR spacer
gtctttttttatatctattacttttgtgag	Protospacer
. . *** **** **************. .

226. spacer 2.26|511977|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NZ_CP038958 (Piscirickettsia salmonis strain Psal-041 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

agtatttattatctctattacttttgtata	CRISPR spacer
gtctttttttatatctattacttttgtgag	Protospacer
. . *** **** **************. .

227. spacer 2.26|511977|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NZ_CP039196 (Piscirickettsia salmonis strain Psal-161 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

agtatttattatctctattacttttgtata	CRISPR spacer
gtctttttttatatctattacttttgtgag	Protospacer
. . *** **** **************. .

228. spacer 2.26|511977|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NZ_CP038812 (Piscirickettsia salmonis strain Psal-001 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

agtatttattatctctattacttttgtata	CRISPR spacer
gtctttttttatatctattacttttgtgag	Protospacer
. . *** **** **************. .

229. spacer 2.26|511977|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NZ_CP013769 (Piscirickettsia salmonis strain PM23019A plasmid p1PS3, complete sequence) position: , mismatch: 9, identity: 0.7

agtatttattatctctattacttttgtata	CRISPR spacer
gtctttttttatatctattacttttgtgag	Protospacer
. . *** **** **************. .

230. spacer 2.26|511977|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NZ_CP033942 (Piscirickettsia salmonis strain EM-90 plasmid pPSEM90-5, complete sequence) position: , mismatch: 9, identity: 0.7

agtatttattatctctattacttttgtata	CRISPR spacer
gtctttttttatatctattacttttgtgag	Protospacer
. . *** **** **************. .

231. spacer 2.26|511977|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NZ_CP039228 (Piscirickettsia salmonis strain SR1 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

agtatttattatctctattacttttgtata	CRISPR spacer
gtctttttttatatctattacttttgtgag	Protospacer
. . *** **** **************. .

232. spacer 2.26|511977|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NZ_CP013761 (Piscirickettsia salmonis strain AY6492A plasmid p4PS1, complete sequence) position: , mismatch: 9, identity: 0.7

agtatttattatctctattacttttgtata	CRISPR spacer
gtctttttttatatctattacttttgtgag	Protospacer
. . *** **** **************. .

233. spacer 2.26|511977|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NZ_CP013774 (Piscirickettsia salmonis strain PM37984A plasmid p1PS4, complete sequence) position: , mismatch: 9, identity: 0.7

agtatttattatctctattacttttgtata	CRISPR spacer
gtctttttttatatctattacttttgtgag	Protospacer
. . *** **** **************. .

234. spacer 2.26|511977|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NZ_CP013779 (Piscirickettsia salmonis strain PM51819A plasmid p1PS5, complete sequence) position: , mismatch: 9, identity: 0.7

agtatttattatctctattacttttgtata	CRISPR spacer
gtctttttttatatctattacttttgtgag	Protospacer
. . *** **** **************. .

235. spacer 2.26|511977|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NZ_CP050945 (Piscirickettsia salmonis strain Ps-2192A plasmid Ps2192A-p7, complete sequence) position: , mismatch: 9, identity: 0.7

agtatttattatctctattacttttgtata	CRISPR spacer
gtctttttttatatctattacttttgtgag	Protospacer
. . *** **** **************. .

236. spacer 2.26|511977|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NZ_CP038892 (Piscirickettsia salmonis strain Psal-005 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

agtatttattatctctattacttttgtata	CRISPR spacer
gtctttttttatatctattacttttgtgag	Protospacer
. . *** **** **************. .

237. spacer 2.26|511977|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NZ_CP038914 (Piscirickettsia salmonis strain Psal-010a plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

agtatttattatctctattacttttgtata	CRISPR spacer
gtctttttttatatctattacttttgtgag	Protospacer
. . *** **** **************. .

238. spacer 2.26|511977|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NZ_CP038968 (Piscirickettsia salmonis strain Psal-068 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

agtatttattatctctattacttttgtata	CRISPR spacer
gtctttttttatatctattacttttgtgag	Protospacer
. . *** **** **************. .

239. spacer 2.26|511977|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NZ_CP039202 (Piscirickettsia salmonis strain Psal-163 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

agtatttattatctctattacttttgtata	CRISPR spacer
gtctttttttatatctattacttttgtgag	Protospacer
. . *** **** **************. .

240. spacer 2.26|511977|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NZ_CP039205 (Piscirickettsia salmonis strain Psal-182 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

agtatttattatctctattacttttgtata	CRISPR spacer
gtctttttttatatctattacttttgtgag	Protospacer
. . *** **** **************. .

241. spacer 2.26|511977|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NZ_CP039235 (Piscirickettsia salmonis strain BI1 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

agtatttattatctctattacttttgtata	CRISPR spacer
gtctttttttatatctattacttttgtgag	Protospacer
. . *** **** **************. .

242. spacer 2.26|511977|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NZ_CP039241 (Piscirickettsia salmonis strain MR5 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

agtatttattatctctattacttttgtata	CRISPR spacer
gtctttttttatatctattacttttgtgag	Protospacer
. . *** **** **************. .

243. spacer 2.26|511977|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NZ_CP039042 (Piscirickettsia salmonis strain Psal-072 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.7

agtatttattatctctattacttttgtata	CRISPR spacer
gtctttttttatatctattacttttgtgag	Protospacer
. . *** **** **************. .

244. spacer 2.26|511977|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NZ_CP039187 (Piscirickettsia salmonis strain Psal-159 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

agtatttattatctctattacttttgtata	CRISPR spacer
gtctttttttatatctattacttttgtgag	Protospacer
. . *** **** **************. .

245. spacer 2.26|511977|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NZ_CP038948 (Piscirickettsia salmonis strain Psal-028 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

agtatttattatctctattacttttgtata	CRISPR spacer
gtctttttttatatctattacttttgtgag	Protospacer
. . *** **** **************. .

246. spacer 2.26|511977|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NZ_CP038933 (Piscirickettsia salmonis strain Psal-025 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

agtatttattatctctattacttttgtata	CRISPR spacer
gtctttttttatatctattacttttgtgag	Protospacer
. . *** **** **************. .

247. spacer 2.26|511977|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NZ_CP038973 (Piscirickettsia salmonis strain Psal-069 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

agtatttattatctctattacttttgtata	CRISPR spacer
gtctttttttatatctattacttttgtgag	Protospacer
. . *** **** **************. .

248. spacer 2.26|511977|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NZ_CP039036 (Piscirickettsia salmonis strain Psal-071 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

agtatttattatctctattacttttgtata	CRISPR spacer
gtctttttttatatctattacttttgtgag	Protospacer
. . *** **** **************. .

249. spacer 2.26|511977|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NZ_CP039066 (Piscirickettsia salmonis strain Psal-107 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

agtatttattatctctattacttttgtata	CRISPR spacer
gtctttttttatatctattacttttgtgag	Protospacer
. . *** **** **************. .

250. spacer 2.26|511977|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NZ_CP038887 (Piscirickettsia salmonis strain Psal-004 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

agtatttattatctctattacttttgtata	CRISPR spacer
gtctttttttatatctattacttttgtgag	Protospacer
. . *** **** **************. .

251. spacer 2.26|511977|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NZ_CP039215 (Piscirickettsia salmonis strain Psal-104a plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

agtatttattatctctattacttttgtata	CRISPR spacer
gtctttttttatatctattacttttgtgag	Protospacer
. . *** **** **************. .

252. spacer 2.26|511977|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NZ_CP038909 (Piscirickettsia salmonis strain Psal-009 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

agtatttattatctctattacttttgtata	CRISPR spacer
gtctttttttatatctattacttttgtgag	Protospacer
. . *** **** **************. .

253. spacer 2.26|511977|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NZ_CP038938 (Piscirickettsia salmonis strain Psal-026 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

agtatttattatctctattacttttgtata	CRISPR spacer
gtctttttttatatctattacttttgtgag	Protospacer
. . *** **** **************. .

254. spacer 2.26|511977|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NZ_CP038963 (Piscirickettsia salmonis strain Psal-051 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

agtatttattatctctattacttttgtata	CRISPR spacer
gtctttttttatatctattacttttgtgag	Protospacer
. . *** **** **************. .

255. spacer 2.26|511977|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NZ_CP038877 (Piscirickettsia salmonis strain Psal-002 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

agtatttattatctctattacttttgtata	CRISPR spacer
gtctttttttatatctattacttttgtgag	Protospacer
. . *** **** **************. .

256. spacer 2.26|511977|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NZ_CP038882 (Piscirickettsia salmonis strain Psal-003 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

agtatttattatctctattacttttgtata	CRISPR spacer
gtctttttttatatctattacttttgtgag	Protospacer
. . *** **** **************. .

257. spacer 2.27|512043|30|NZ_FFHB01000002|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP017376 (Stanieria sp. NIES-3757 plasmid plasmid1 DNA, complete genome) position: , mismatch: 9, identity: 0.7

cgtattcaaaagtatatccgctagcctcaa	CRISPR spacer
taactgtaaaagtatatcctctagcctctg	Protospacer
..  * .************ ******** .

258. spacer 2.37|512704|30|NZ_FFHB01000002|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR136959 (Alteromonas sp. 76-1 plasmid pAlt76, complete sequence) position: , mismatch: 9, identity: 0.7

ttgggcaaaatgaccgtaataaatccattc	CRISPR spacer
gctttcaaaatgatcgtaataaatcaatag	Protospacer
 .   ********.*********** **

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

97292 : 108021

Listeria_phage(40.0%)

tail,holin

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003724957.1\|97292_98021_-	N-acetylmuramoyl-L-alanine amidase	A0A0N9SGH1	Paenibacillus_phage	1.3e-34	42.5
WP_003728205.1\|98001_98424_-\|holin	holin family protein	Q2I8E7	Bacillus_phage	8.6e-28	46.3
WP_003728206.1\|98442_98979_-	hypothetical protein	NA	NA	NA	NA
WP_003728207.1\|98975_99455_-	hypothetical protein	NA	NA	NA	NA
WP_003731180.1\|99469_100045_-	hypothetical protein	NA	NA	NA	NA
WP_003721751.1\|100059_100359_-	hypothetical protein	NA	NA	NA	NA
WP_003728209.1\|100348_101485_-\|tail	phage tail protein	A0A0B5D0G3	Listeria_phage	2.2e-46	33.8
WP_003731179.1\|101494_102313_-\|tail	phage tail family protein	Q9T1A6	Listeria_phage	2.2e-43	35.5
WP_003731178.1\|102309_104178_-	membrane protein	A0A097PAU2	Streptococcus_pyogenes_phage	3.5e-20	45.8
WP_003740367.1\|104164_104569_-	hypothetical protein	A0A097PAX1	Streptococcus_pyogenes_phage	8.2e-20	43.7
WP_003721745.1\|104610_104913_-	hypothetical protein	NA	NA	NA	NA
WP_003721744.1\|104960_105473_-\|tail	phage major tail protein, TP901-1 family	A0A097PBF4	Streptococcus_pyogenes_phage	1.2e-47	62.7
WP_003728212.1\|105485_105875_-	DUF5072 family protein	NA	NA	NA	NA
WP_003731177.1\|106154_106571_-	hypothetical protein	NA	NA	NA	NA
WP_003724946.1\|106582_107011_-	hypothetical protein	A8ATZ8	Listeria_phage	3.9e-12	45.7
WP_003721740.1\|107227_107563_+	helix-turn-helix transcriptional regulator	A0A2H4JAR9	uncultured_Caudovirales_phage	4.0e-20	52.5
WP_003728215.1\|107568_108021_+	ImmA/IrrE family metallo-endopeptidase	A0A059T7S0	Listeria_phage	4.0e-31	47.9

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_FFHB01000004

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

275 : 40476

Listeria_phage(92.86%)

capsid,holin,terminase,integrase,plate,tail,portal

attL 139:188|attR 40901:40950

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
139:188	attL	NA	NA	NA	NA
WP_061727252.1\|275_1439_-\|integrase	site-specific integrase	S5MNZ2	Brevibacillus_phage	2.0e-50	31.0
WP_061729902.1\|1501_2152_-	hypothetical protein	NA	NA	NA	NA
WP_031644858.1\|2207_2375_-	hypothetical protein	NA	NA	NA	NA
WP_061727254.1\|2530_3007_-	helix-turn-helix transcriptional regulator	A8ASM2	Listeria_phage	2.4e-42	63.4
WP_061727255.1\|3162_3390_+	helix-turn-helix transcriptional regulator	A8ATK0	Listeria_phage	1.9e-10	56.9
WP_003733687.1\|3401_3596_+	hypothetical protein	A0A059T6E5	Listeria_phage	1.4e-25	95.3
WP_003733686.1\|3607_3892_+	hypothetical protein	A0A0B5D168	Listeria_phage	4.5e-41	85.1
WP_003722567.1\|3917_4199_+	hypothetical protein	A8ATX8	Listeria_phage	1.8e-37	95.7
WP_003733684.1\|4200_4398_-	hypothetical protein	Q9T179	Listeria_phage	4.0e-20	96.0
WP_061727256.1\|4461_5241_+	phage antirepressor KilAC domain-containing protein	A0A0B5CTU1	Listeria_phage	9.3e-137	95.0
WP_003733682.1\|5364_5895_+	hypothetical protein	A0A0B5D173	Listeria_phage	2.7e-79	89.6
WP_003733681.1\|5884_6091_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_003722564.1\|6193_6382_+	hypothetical protein	Q9T175	Listeria_phage	1.8e-22	82.3
WP_077915324.1\|6613_7573_+	YqaJ viral recombinase family protein	A8ATY5	Listeria_phage	2.7e-178	99.4
WP_061729903.1\|7575_8391_+	recombinase RecT	A8ATY6	Listeria_phage	1.2e-147	97.0
WP_061729904.1\|8410_9343_+	DnaD domain-containing protein	A8ATY7	Listeria_phage	2.5e-165	98.1
WP_061729905.1\|9339_10053_+	SAM-dependent DNA methyltransferase	A8ATD5	Listeria_phage	2.3e-126	96.2
WP_023548469.1\|10063_11008_+\|integrase	site-specific integrase	A8ATD6	Listeria_phage	1.7e-177	98.4
WP_003762551.1\|11020_11701_+	hypothetical protein	A8ATD7	Listeria_phage	7.9e-116	90.7
WP_003762550.1\|11697_12066_+	hypothetical protein	A8ASN9	Listeria_phage	1.6e-62	93.4
WP_003762549.1\|12062_12356_+	hypothetical protein	A8ATM4	Listeria_phage	9.1e-37	81.4
WP_041918405.1\|12372_12558_+	hypothetical protein	Q8W5X1	Listeria_phage	1.1e-24	91.1
WP_061729906.1\|12757_13033_+	hypothetical protein	A0A059T7Z9	Listeria_phage	1.1e-44	96.7
WP_023553777.1\|13138_13351_+	hypothetical protein	NA	NA	NA	NA
WP_003733707.1\|13373_13868_+	hypothetical protein	A0A1S5SDR7	Streptococcus_phage	6.1e-33	47.6
WP_003733708.1\|13872_14085_+	hypothetical protein	NA	NA	NA	NA
WP_061729907.1\|14085_14568_+	single-stranded DNA-binding protein	A8ASP5	Listeria_phage	1.8e-77	91.9
WP_031641288.1\|14599_14905_+	hypothetical protein	A8ATZ8	Listeria_phage	5.0e-46	99.0
WP_014601286.1\|14901_15042_+	BH0509 family protein	A8ATZ9	Listeria_phage	2.6e-18	100.0
WP_003769966.1\|15007_15412_+	endodeoxyribonuclease	A8AU00	Listeria_phage	5.4e-72	100.0
WP_003734123.1\|15556_15991_+	hypothetical protein	A8AU03	Listeria_phage	9.0e-73	95.1
WP_061727260.1\|16355_16895_+	hypothetical protein	NA	NA	NA	NA
WP_014931699.1\|16940_17696_+\|terminase	terminase small subunit	V5URT8	Oenococcus_phage	9.0e-44	45.6
WP_061727261.1\|17688_18999_+\|terminase	PBSX family phage terminase large subunit	A0A286QNX6	Streptococcus_phage	2.1e-165	65.1
WP_039390008.1\|19011_20502_+\|portal	phage portal protein	A0A0B5D0F2	Listeria_phage	3.6e-278	97.8
WP_031645716.1\|20507_21647_+\|capsid	phage minor capsid protein	A8ASJ4	Listeria_phage	8.7e-200	96.0
WP_031645715.1\|21725_22295_+	phage scaffolding protein	Q9T1B8	Listeria_phage	2.8e-90	96.8
WP_031645714.1\|22318_23218_+\|capsid	phage major capsid protein	Q9T1B7	Listeria_phage	1.0e-166	99.7
WP_077918248.1\|23217_23376_+	hypothetical protein	Q9T1B6	Listeria_phage	2.5e-17	92.3
WP_031645713.1\|23377_23773_+	hypothetical protein	A8ASJ8	Listeria_phage	5.9e-55	84.0
WP_031645712.1\|23772_24135_+	hypothetical protein	A0A0B5D151	Listeria_phage	1.8e-58	91.7
WP_031645711.1\|24134_24473_+	hypothetical protein	A0A059T7W4	Listeria_phage	7.0e-57	97.3
WP_031645710.1\|24472_24880_+	hypothetical protein	A0A0B5CU21	Listeria_phage	1.5e-66	98.5
WP_010990223.1\|24882_25320_+	hypothetical protein	A8ASK2	Listeria_phage	2.5e-78	99.3
WP_031645709.1\|25249_25582_+	Ig domain-containing protein	Q9T1B0	Listeria_phage	1.3e-39	84.5
WP_031644594.1\|25633_26056_+\|tail	phage tail assembly chaperone	Q9T1A9	Listeria_phage	2.0e-69	99.3
WP_031644596.1\|26061_26661_+	bacteriophage Gp15 family protein	A0A0B5CTW0	Listeria_phage	8.1e-72	68.0
WP_061729908.1\|26676_32040_+	tape measure protein	Q9T1A7	Listeria_phage	0.0e+00	90.7
WP_031645707.1\|32041_32860_+\|tail	phage tail family protein	Q9T1A6	Listeria_phage	3.8e-149	93.4
WP_031645706.1\|32868_33894_+\|tail	phage tail protein	Q9T1A5	Listeria_phage	3.9e-191	93.3
WP_014931687.1\|33894_34923_+	hypothetical protein	Q9T1A4	Listeria_phage	2.1e-189	98.8
WP_061727263.1\|34922_35996_+\|plate	phage baseplate upper protein	Q9T1A3	Listeria_phage	3.8e-181	90.5
WP_061727264.1\|36007_36325_+	hypothetical protein	Q9T1A2	Listeria_phage	1.7e-49	91.4
WP_003743418.1\|36329_36488_+	hypothetical protein	Q9T1A1	Listeria_phage	1.1e-12	80.8
WP_003733957.1\|36530_36836_+	hypothetical protein	A0A059T5E6	Listeria_phage	1.8e-43	100.0
WP_038409869.1\|36835_37096_+\|holin	phage holin	A0A059T684	Listeria_phage	2.2e-34	83.0
WP_068996243.1\|37095_37899_+	N-acetylmuramoyl-L-alanine amidase	A0A059T7X1	Listeria_phage	7.5e-81	81.1
WP_038409916.1\|37939_38713_-	DUF3825 domain-containing protein	A8ATW5	Listeria_phage	2.1e-149	99.6
WP_003733661.1\|38987_39485_-	AP2 domain-containing protein	A8ATW6	Listeria_phage	3.8e-91	100.0
WP_003722518.1\|39509_39959_-	anti-CRISPR protein AcrIIA1	A8ATW7	Listeria_phage	2.4e-76	100.0
WP_003731276.1\|39959_40211_-	hypothetical protein	A8ATW8	Listeria_phage	2.0e-40	100.0
WP_003731277.1\|40242_40476_-	hypothetical protein	A8ATW9	Listeria_phage	4.3e-13	100.0
40901:40950	attR	NA	NA	NA	NA

DBSCAN-SWA_2

154640 : 162482

Streptococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003722610.1\|154640_155600_+	thioredoxin-disulfide reductase	G3MA85	Bacillus_virus	2.0e-88	53.7
WP_003731209.1\|155716_156700_+	UDP-glucose 4-epimerase GalE	A0A2K9L5H6	Tupanvirus	1.5e-51	38.1
WP_003741152.1\|156716_157778_+	galactose mutarotase	NA	NA	NA	NA
WP_003731211.1\|157819_159550_+	phospho-sugar mutase	A0A1X9I671	Streptococcus_phage	2.8e-173	53.0
WP_003722606.1\|159657_160533_+	RNase adapter RapZ	A0A0R8VB27	Thermobifida_phage	1.9e-08	29.7
WP_003731212.1\|160534_161503_+	YvcK family protein	A1IMD5	Streptococcus_phage	1.8e-68	43.6
WP_003725407.1\|161510_162482_+	DNA-binding protein WhiA	Q7AWZ3	Streptococcus_phage	5.2e-52	39.4

Anti-CRISPR protein detection

Acr_ID: NZ_FFHB01000004.1|WP_003731276.1|39959_40211_-|hypothetical-protein

Click the colored protein region to show detailed information

Acr_ID: NZ_FFHB01000004.1|WP_003733687.1|3401_3596_+|hypothetical-protein

Click the colored protein region to show detailed information

Acr_ID: NZ_FFHB01000004.1|WP_003733686.1|3607_3892_+|hypothetical-protein

Click the colored protein region to show detailed information

Acr_ID: NZ_FFHB01000004.1|WP_061729902.1|1501_2152_-|hypothetical-protein

Click the colored protein region to show detailed information

Acr_ID: NZ_FFHB01000004.1|WP_031644858.1|2207_2375_-|hypothetical-protein

Click the colored protein region to show detailed information

Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_FFHB01000004.1|WP_003731276.1|39959_40211_-|hypothetical-protein

39959_40211_-

83 aa aa

AcrIIA12

hit_Aca_id	identity	query_coverage	hit_coverage
anti_CRISPR3641\|WP_003731276.1\|AcrIIA12\|II-A\|Verified\|Listeria-monocytogenes	1.0	1	1.0

275-40476

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_FFHB01000001_1	Unclear	1.14\|50713\|36\|NZ_FFHB01000001\|CRISPRCasFinder,CRT,PILER-CR	50713-50748	36	35677-35712	1
NZ_FFHB01000001_1	Unclear	1.18\|50970\|34\|NZ_FFHB01000001\|CRISPRCasFinder,CRT,PILER-CR	50970-51003	34	36286-36319	0
NZ_FFHB01000002_2	TypeII	2.10\|510920\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	510920-510949	30	15610-15581	2

1. spacer 1.14|50713|36|NZ_FFHB01000001|CRISPRCasFinder,CRT,PILER-CR matches to NZ_FFHB01000004 position: 35677-35712, mismatch: 1

ctggttactcaactggcgacagtaatacacctcaat	CRISPR spacer
ctggttactcaactggcgacagtagtacacctcaat	Protospacer
************************.***********

2. spacer 1.18|50970|34|NZ_FFHB01000001|CRISPRCasFinder,CRT,PILER-CR matches to NZ_FFHB01000004 position: 36286-36319, mismatch: 0

agaagcgttagcggcattgttcgaaagtaattta	CRISPR spacer
agaagcgttagcggcattgttcgaaagtaattta	Protospacer
**********************************

3. spacer 2.10|510920|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NZ_FFHB01000004 position: 15610-15581, mismatch: 2

tgtctgaatgtagttaatatcttcaacttg	CRISPR spacer
tgtctgaatgtagtttatatcttcaatttg	Protospacer
*************** **********.***

NZ_FFHB01000004.1|WP_003733687.1|3401_3596_+|hypothetical-protein

3401_3596_+

64 aa aa

HTH_XRE

Identity	Hit_domain_coverage
0.46551724137931033	1.0

275-40476

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_FFHB01000001_1	Unclear	1.14\|50713\|36\|NZ_FFHB01000001\|CRISPRCasFinder,CRT,PILER-CR	50713-50748	36	35677-35712	1
NZ_FFHB01000001_1	Unclear	1.18\|50970\|34\|NZ_FFHB01000001\|CRISPRCasFinder,CRT,PILER-CR	50970-51003	34	36286-36319	0
NZ_FFHB01000002_2	TypeII	2.10\|510920\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	510920-510949	30	15610-15581	2

1. spacer 1.14|50713|36|NZ_FFHB01000001|CRISPRCasFinder,CRT,PILER-CR matches to NZ_FFHB01000004 position: 35677-35712, mismatch: 1

ctggttactcaactggcgacagtaatacacctcaat	CRISPR spacer
ctggttactcaactggcgacagtagtacacctcaat	Protospacer
************************.***********

2. spacer 1.18|50970|34|NZ_FFHB01000001|CRISPRCasFinder,CRT,PILER-CR matches to NZ_FFHB01000004 position: 36286-36319, mismatch: 0

agaagcgttagcggcattgttcgaaagtaattta	CRISPR spacer
agaagcgttagcggcattgttcgaaagtaattta	Protospacer
**********************************

3. spacer 2.10|510920|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NZ_FFHB01000004 position: 15610-15581, mismatch: 2

tgtctgaatgtagttaatatcttcaacttg	CRISPR spacer
tgtctgaatgtagtttatatcttcaatttg	Protospacer
*************** **********.***

NZ_FFHB01000004.1|WP_003733686.1|3607_3892_+|hypothetical-protein

3607_3892_+

94 aa aa

HTH_XRE

Identity	Hit_domain_coverage
0.46551724137931033	1.0

275-40476

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_FFHB01000001_1	Unclear	1.14\|50713\|36\|NZ_FFHB01000001\|CRISPRCasFinder,CRT,PILER-CR	50713-50748	36	35677-35712	1
NZ_FFHB01000001_1	Unclear	1.18\|50970\|34\|NZ_FFHB01000001\|CRISPRCasFinder,CRT,PILER-CR	50970-51003	34	36286-36319	0
NZ_FFHB01000002_2	TypeII	2.10\|510920\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	510920-510949	30	15610-15581	2

1. spacer 1.14|50713|36|NZ_FFHB01000001|CRISPRCasFinder,CRT,PILER-CR matches to NZ_FFHB01000004 position: 35677-35712, mismatch: 1

ctggttactcaactggcgacagtaatacacctcaat	CRISPR spacer
ctggttactcaactggcgacagtagtacacctcaat	Protospacer
************************.***********

2. spacer 1.18|50970|34|NZ_FFHB01000001|CRISPRCasFinder,CRT,PILER-CR matches to NZ_FFHB01000004 position: 36286-36319, mismatch: 0

agaagcgttagcggcattgttcgaaagtaattta	CRISPR spacer
agaagcgttagcggcattgttcgaaagtaattta	Protospacer
**********************************

3. spacer 2.10|510920|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NZ_FFHB01000004 position: 15610-15581, mismatch: 2

tgtctgaatgtagttaatatcttcaacttg	CRISPR spacer
tgtctgaatgtagtttatatcttcaatttg	Protospacer
*************** **********.***

NZ_FFHB01000004.1|WP_061729902.1|1501_2152_-|hypothetical-protein

1501_2152_-

216 aa aa

HTH_XRE

Identity	Hit_domain_coverage
0.44	0.8620689655172413

275-40476

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_FFHB01000001_1	Unclear	1.14\|50713\|36\|NZ_FFHB01000001\|CRISPRCasFinder,CRT,PILER-CR	50713-50748	36	35677-35712	1
NZ_FFHB01000001_1	Unclear	1.18\|50970\|34\|NZ_FFHB01000001\|CRISPRCasFinder,CRT,PILER-CR	50970-51003	34	36286-36319	0
NZ_FFHB01000002_2	TypeII	2.10\|510920\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	510920-510949	30	15610-15581	2

1. spacer 1.14|50713|36|NZ_FFHB01000001|CRISPRCasFinder,CRT,PILER-CR matches to NZ_FFHB01000004 position: 35677-35712, mismatch: 1

ctggttactcaactggcgacagtaatacacctcaat	CRISPR spacer
ctggttactcaactggcgacagtagtacacctcaat	Protospacer
************************.***********

2. spacer 1.18|50970|34|NZ_FFHB01000001|CRISPRCasFinder,CRT,PILER-CR matches to NZ_FFHB01000004 position: 36286-36319, mismatch: 0

agaagcgttagcggcattgttcgaaagtaattta	CRISPR spacer
agaagcgttagcggcattgttcgaaagtaattta	Protospacer
**********************************

3. spacer 2.10|510920|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NZ_FFHB01000004 position: 15610-15581, mismatch: 2

tgtctgaatgtagttaatatcttcaacttg	CRISPR spacer
tgtctgaatgtagtttatatcttcaatttg	Protospacer
*************** **********.***

NZ_FFHB01000004.1|WP_031644858.1|2207_2375_-|hypothetical-protein

2207_2375_-

55 aa aa

HTH_XRE

Identity	Hit_domain_coverage
0.44	0.8620689655172413

275-40476

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_FFHB01000001_1	Unclear	1.14\|50713\|36\|NZ_FFHB01000001\|CRISPRCasFinder,CRT,PILER-CR	50713-50748	36	35677-35712	1
NZ_FFHB01000001_1	Unclear	1.18\|50970\|34\|NZ_FFHB01000001\|CRISPRCasFinder,CRT,PILER-CR	50970-51003	34	36286-36319	0
NZ_FFHB01000002_2	TypeII	2.10\|510920\|30\|NZ_FFHB01000002\|CRISPRCasFinder,CRT	510920-510949	30	15610-15581	2

1. spacer 1.14|50713|36|NZ_FFHB01000001|CRISPRCasFinder,CRT,PILER-CR matches to NZ_FFHB01000004 position: 35677-35712, mismatch: 1

ctggttactcaactggcgacagtaatacacctcaat	CRISPR spacer
ctggttactcaactggcgacagtagtacacctcaat	Protospacer
************************.***********

2. spacer 1.18|50970|34|NZ_FFHB01000001|CRISPRCasFinder,CRT,PILER-CR matches to NZ_FFHB01000004 position: 36286-36319, mismatch: 0

agaagcgttagcggcattgttcgaaagtaattta	CRISPR spacer
agaagcgttagcggcattgttcgaaagtaattta	Protospacer
**********************************

3. spacer 2.10|510920|30|NZ_FFHB01000002|CRISPRCasFinder,CRT matches to NZ_FFHB01000004 position: 15610-15581, mismatch: 2

tgtctgaatgtagttaatatcttcaacttg	CRISPR spacer
tgtctgaatgtagtttatatcttcaatttg	Protospacer
*************** **********.***

3. NZ_FFHB01000001

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_FFHB01000001_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_FFHB01000001_1

49965-51292

Unclear

I-A

Consensus_repeat	Method
GTTTTAACTACTTATTATGAAATGTAAATATTA	PILER-CR
GTTTTAACTACTTATTATGAAATGTAAAT	CRISPRCasFinder
GTTTTAANNNCTACTTATTATGAAATGTAAAT	CRT
GTTTTAACTACTTATTATGAAATGTAAAT	PILER-CR

20 spacers

cas2,cas3,cas5,cas7,cas8b2,cas6

The CRISPR arrays of NZ_FFHB01000001_1

>merge|NZ_FFHB01000001|1|49965-51292|PILER-CR,CRISPRCasFinder,CRT,PILER-CR
GTTTTAACTACTTATTATGAAATGTAAATCAATGCTTAAACCGAGAGCATCAAATTGTTCCCATGCGTTTTAACTACTTATTATGAAATGTAAATATTACAGTACAAGCAAGGGTTATTGAGTTAAATATTGTTTTAACTACTTATTATGAAATGTAAATATTAATGATAAGAGCGGAAAGAAAACTTTCAAGGGGTTTTAACTACTTATTATGAAATGTAAATTCCCCCTTAAGATACAAACTCGATTTGACAGGTGCAGGTTTTAACTACTACTTATTATGAAATGTAAATTCGTTTATGACCTTATGAAAGAGTTAACACCTCGACGTTTTAACTACTTATTATGAAATGTAAATCTTCCTACTTTTTGACATAAAAAATAAGCCGAGTTGGTTTTAACTACTTATTATGAAATGTAAATAAGTTCAAAACCTCCCACACCCGCTATGAATAAATTGTTTTAACTACTTATTATGAAATGTAAATTTCGTAATTTTACGATTATACTTTTTAGTCAAATTACGTTTTAACTACTTATTATGAAATGTAAATGTAACAAGTAGTGTTATACCTGCAACAATACCAGTGTTTTAACTACTTATTATGAAATGTAAATTGGAAATGGGAAGAAAGAAATGCACTGATTGTAGAGGTTTTAACTACTTATTATGAAATGTAAATGTCCACATCGACAATAAAAAACACATTGTATCACTTGTTTTAACTACTTATTATGAAATGTAAATCTGGTTACTCAACTGGCGACAGTAATACACCTCAATGTTTTAACTACTTATTATGAAATGTAAATTTTGGATAGGTTGTTTCTGATAAATAGGTTCACGGTTTTAACTACTTATTATGAAATGTAAATAGAAAAAAAACATCTTTCCAATTTGTTGTTTTGCGTTTTAACTACTTATTATGAAATGTAAATACAAGTGCTAGAACAGAAGTTATAATTTGAACATTACGTTTTAACTACTTATTATGAAATGTAAATAGAAGCGTTAGCGGCATTGTTCGAAAGTAATTTAGTTTTAACTACTTATTATGAAATGTAAATTATAAAATATTGCCCAATGTGCGGAAGGAGTTTGGAGTTTTAACTACTTATTATGAAATGTAAATAAGAAATCCGGGAAGTTTTGTTCTACAGAGCGAACGGGTTTTAACTACTTATTATGAAATGTAAATGTGTAATTCTTAATTCCGTATTGATTCGCTAGTTTTGTTTTAACTACTTATTATGAAATGTAAATTTTTGAAATATGAGGACTTAGAAAATGAAAAAAATGTTTTAACTACTTATTATGAAATCATAAA

>NZ_FFHB01000001|1|1|49965-50129|PILER-CR
GTTTTAACTACTTATTATGAAATGTAAATCAATG	CTTAAACCGAGAGCATCAAATTGTTCCCATGCGTTTT
AACTACTTATTATGAAATGTAAATATTACAGTAC	AAGCAAGGGTTATTGAGTTAAATATTGTTTTA
ACTACTTATTATGAAATGTAAATATTAATGATAAGAGCGGAAAGAAAACTTTCAAGGGGTTTTAACTACTTATTATGAAATGTAAATTCCCCCTTAAGATACAAACTCGATTTGACAGGTGCAGGTTTTAACTACTACTTATTATGAAATGTAAATTCGTTTATGACCTTATGAAAGAGTTAACACCTCGACGTTTTAACTACTTATTATGAAATGTAAAT	CTTCCTACTTTTTGACATAAAAAATAAGCCGAGTTG
GTTTTAACTACTTATTATGAAATGTAAAT	AAGTTCAAAACCTCCCACACCCGCTATGAATAAATT
GTTTTAACTACTTATTATGAAATGTAAAT	TTCGTAATTTTACGATTATACTTTTTAGTCAAATTAC
GTTTTAACTACTTATTATGAAATGTAAAT	GTAACAAGTAGTGTTATACCTGCAACAATACCAGT
GTTTTAACTACTTATTATGAAATGTAAAT	TGGAAATGGGAAGAAAGAAATGCACTGATTGTAGAG
GTTTTAACTACTTATTATGAAATGTAAAT	GTCCACATCGACAATAAAAAACACATTGTATCACTT
GTTTTAACTACTTATTATGAAATGTAAAT	CTGGTTACTCAACTGGCGACAGTAATACACCTCAAT
GTTTTAACTACTTATTATGAAATGTAAAT	TTTGGATAGGTTGTTTCTGATAAATAGGTTCACG
GTTTTAACTACTTATTATGAAATGTAAAT	AGAAAAAAAACATCTTTCCAATTTGTTGTTTTGC
GTTTTAACTACTTATTATGAAATGTAAAT	ACAAGTGCTAGAACAGAAGTTATAATTTGAACATTAC
GTTTTAACTACTTATTATGAAATGTAAAT	AGAAGCGTTAGCGGCATTGTTCGAAAGTAATTTA
GTTTTAACTACTTATTATGAAATGTAAAT	TATAAAATATTGCCCAATGTGCGGAAGGAGTTTGGA
GTTTTAACTACTTATTATGAAATGTAAAT	AAGAAATCCGGGAAGTTTTGTTCTACAGAGCGAACGG
GTTTTAACTACTTATTATGAAATGTAAAT	GTGTAATTCTTAATTCCGTATTGATTCGCTAGTTTT


>NZ_FFHB01000001|1|1|49965-51292|CRISPRCasFinder
GTTTTAACTACTTATTATGAAATGTAAAT	CAATGCTTAAACCGAGAGCATCAAATTGTTCCCATGC
GTTTTAACTACTTATTATGAAATGTAAAT	ATTACAGTACAAGCAAGGGTTATTGAGTTAAATATT
GTTTTAACTACTTATTATGAAATGTAAAT	ATTAATGATAAGAGCGGAAAGAAAACTTTCAAGGG
GTTTTAACTACTTATTATGAAATGTAAAT	TCCCCCTTAAGATACAAACTCGATTTGACAGGTGCAGGTT
TTAACTACTACTTATTATGAAATGTAAAT	TCGTTTATGACCTTATGAAAGAGTTAACACCTCGAC
GTTTTAACTACTTATTATGAAATGTAAAT	CTTCCTACTTTTTGACATAAAAAATAAGCCGAGTTG
GTTTTAACTACTTATTATGAAATGTAAAT	AAGTTCAAAACCTCCCACACCCGCTATGAATAAATT
GTTTTAACTACTTATTATGAAATGTAAAT	TTCGTAATTTTACGATTATACTTTTTAGTCAAATTAC
GTTTTAACTACTTATTATGAAATGTAAAT	GTAACAAGTAGTGTTATACCTGCAACAATACCAGT
GTTTTAACTACTTATTATGAAATGTAAAT	TGGAAATGGGAAGAAAGAAATGCACTGATTGTAGAG
GTTTTAACTACTTATTATGAAATGTAAAT	GTCCACATCGACAATAAAAAACACATTGTATCACTT
GTTTTAACTACTTATTATGAAATGTAAAT	CTGGTTACTCAACTGGCGACAGTAATACACCTCAAT
GTTTTAACTACTTATTATGAAATGTAAAT	TTTGGATAGGTTGTTTCTGATAAATAGGTTCACG
GTTTTAACTACTTATTATGAAATGTAAAT	AGAAAAAAAACATCTTTCCAATTTGTTGTTTTGC
GTTTTAACTACTTATTATGAAATGTAAAT	ACAAGTGCTAGAACAGAAGTTATAATTTGAACATTAC
GTTTTAACTACTTATTATGAAATGTAAAT	AGAAGCGTTAGCGGCATTGTTCGAAAGTAATTTA
GTTTTAACTACTTATTATGAAATGTAAAT	TATAAAATATTGCCCAATGTGCGGAAGGAGTTTGGA
GTTTTAACTACTTATTATGAAATGTAAAT	AAGAAATCCGGGAAGTTTTGTTCTACAGAGCGAACGG
GTTTTAACTACTTATTATGAAATGTAAAT	GTGTAATTCTTAATTCCGTATTGATTCGCTAGTTTT
GTTTTAACTACTTATTATGAAATGTAAAT	TTTTGAAATATGAGGACTTAGAAAATGAAAAAAAT
GTTTTAACTACTTATTATGAAATCATAAA

>NZ_FFHB01000001|1|1|49965-51292|CRT
GTTTTAACTACTTATTATGAAATGTAAAT	CAATGCTTAAACCGAGAGCATCAAATTGTTCCCATGC
GTTTTAACTACTTATTATGAAATGTAAAT	ATTACAGTACAAGCAAGGGTTATTGAGTTAAATATT
GTTTTAACTACTTATTATGAAATGTAAAT	ATTAATGATAAGAGCGGAAAGAAAACTTTCAAGGG
GTTTTAACTACTTATTATGAAATGTAAAT	TCCCCCTTAAGATACAAACTCGATTTGACAGGTGCAG
GTTTTAACTACTACTTATTATGAAATGTA	AATTCGTTTATGACCTTATGAAAGAGTTAACACCTCGAC
GTTTTAACTACTTATTATGAAATGTAAAT	CTTCCTACTTTTTGACATAAAAAATAAGCCGAGTTG
GTTTTAACTACTTATTATGAAATGTAAAT	AAGTTCAAAACCTCCCACACCCGCTATGAATAAATT
GTTTTAACTACTTATTATGAAATGTAAAT	TTCGTAATTTTACGATTATACTTTTTAGTCAAATTAC
GTTTTAACTACTTATTATGAAATGTAAAT	GTAACAAGTAGTGTTATACCTGCAACAATACCAGT
GTTTTAACTACTTATTATGAAATGTAAAT	TGGAAATGGGAAGAAAGAAATGCACTGATTGTAGAG
GTTTTAACTACTTATTATGAAATGTAAAT	GTCCACATCGACAATAAAAAACACATTGTATCACTT
GTTTTAACTACTTATTATGAAATGTAAAT	CTGGTTACTCAACTGGCGACAGTAATACACCTCAAT
GTTTTAACTACTTATTATGAAATGTAAAT	TTTGGATAGGTTGTTTCTGATAAATAGGTTCACG
GTTTTAACTACTTATTATGAAATGTAAAT	AGAAAAAAAACATCTTTCCAATTTGTTGTTTTGC
GTTTTAACTACTTATTATGAAATGTAAAT	ACAAGTGCTAGAACAGAAGTTATAATTTGAACATTAC
GTTTTAACTACTTATTATGAAATGTAAAT	AGAAGCGTTAGCGGCATTGTTCGAAAGTAATTTA
GTTTTAACTACTTATTATGAAATGTAAAT	TATAAAATATTGCCCAATGTGCGGAAGGAGTTTGGA
GTTTTAACTACTTATTATGAAATGTAAAT	AAGAAATCCGGGAAGTTTTGTTCTACAGAGCGAACGG
GTTTTAACTACTTATTATGAAATGTAAAT	GTGTAATTCTTAATTCCGTATTGATTCGCTAGTTTT
GTTTTAACTACTTATTATGAAATGTAAAT	TTTTGAAATATGAGGACTTAGAAAATGAAAAAAAT
GTTTTAACTACTTATTATGAAATCATAAA

>NZ_FFHB01000001|1|2|50294-51228|PILER-CR
	CTTAAACCGAGAGCATCAAATTGTTCCCATGCGTTTT
AACTACTTATTATGAAATGTAAATATTACAGTAC	AAGCAAGGGTTATTGAGTTAAATATTGTTTTA
ACTACTTATTATGAAATGTAAATATTAATGATAAGAGCGGAAAGAAAACTTTCAAGGGGTTTTAACTACTTATTATGAAATGTAAATTCCCCCTTAAGATACAAACTCGATTTGACAGGTGCAGGTTTTAACTACTACTTATTATGAAATGTAAATTCGTTTATGACCTTATGAAAGAGTTAACACCTCGACGTTTTAACTACTTATTATGAAATGTAAAT	CTTCCTACTTTTTGACATAAAAAATAAGCCGAGTTG
GTTTTAACTACTTATTATGAAATGTAAAT	AAGTTCAAAACCTCCCACACCCGCTATGAATAAATT
GTTTTAACTACTTATTATGAAATGTAAAT	TTCGTAATTTTACGATTATACTTTTTAGTCAAATTAC
GTTTTAACTACTTATTATGAAATGTAAAT	GTAACAAGTAGTGTTATACCTGCAACAATACCAGT
GTTTTAACTACTTATTATGAAATGTAAAT	TGGAAATGGGAAGAAAGAAATGCACTGATTGTAGAG
GTTTTAACTACTTATTATGAAATGTAAAT	GTCCACATCGACAATAAAAAACACATTGTATCACTT
GTTTTAACTACTTATTATGAAATGTAAAT	CTGGTTACTCAACTGGCGACAGTAATACACCTCAAT
GTTTTAACTACTTATTATGAAATGTAAAT	TTTGGATAGGTTGTTTCTGATAAATAGGTTCACG
GTTTTAACTACTTATTATGAAATGTAAAT	AGAAAAAAAACATCTTTCCAATTTGTTGTTTTGC
GTTTTAACTACTTATTATGAAATGTAAAT	ACAAGTGCTAGAACAGAAGTTATAATTTGAACATTAC
GTTTTAACTACTTATTATGAAATGTAAAT	AGAAGCGTTAGCGGCATTGTTCGAAAGTAATTTA
GTTTTAACTACTTATTATGAAATGTAAAT	TATAAAATATTGCCCAATGTGCGGAAGGAGTTTGGA
GTTTTAACTACTTATTATGAAATGTAAAT	AAGAAATCCGGGAAGTTTTGTTCTACAGAGCGAACGG
GTTTTAACTACTTATTATGAAATGTAAAT	GTGTAATTCTTAATTCCGTATTGATTCGCTAGTTTT
GTTTTAACTACTTATTATGAAATGTAAAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_FFHB01000001.1\|WP_003731270.1\|61567_63064_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227617
NZ_FFHB01000001.1\|WP_003731269.1\|60099_61575_+\|hypothetical-protein	unknown	unknown	unknown
NZ_FFHB01000001.1\|WP_003731261.1\|45299_46169_+\|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	cas7	cd09687_cas7_CAS-I-B	gnl\|CDD\|274215
NZ_FFHB01000001.1\|WP_003731264.1\|51364_51733_-\|DUF1304-domain-containing-protein	unknown	unknown	gnl\|CDD\|226282
NZ_FFHB01000001.1\|WP_003726689.1\|54462_55779_-\|6-phospho-beta-glucosidase	unknown	unknown	gnl\|CDD\|133432
NZ_FFHB01000001.1\|WP_003727299.1\|37756_39586_+\|lmo0514-family-class-1-internalin	unknown	unknown	gnl\|CDD\|380190
NZ_FFHB01000001.1\|WP_003731268.1\|59129_59870_-\|MerR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|133381
NZ_FFHB01000001.1\|WP_003727298.1\|40164_41595_-\|CapA-family-protein	unknown	unknown	gnl\|CDD\|225399
NZ_FFHB01000001.1\|WP_003731260.1\|43621_45310_+\|type-I-B-CRISPR-associated-protein-Cas8b1/Cst1	cas8b2	cd09754_cas8b2_CAS-I-B	gnl\|CDD\|187884
NZ_FFHB01000001.1\|WP_003727295.1\|51878_53294_+\|multidrug-efflux-MFS-transporter	unknown	unknown	gnl\|CDD\|129794
NZ_FFHB01000001.1\|WP_003731267.1\|57328_58990_-\|SulP-family-inorganic-anion-transporter	unknown	unknown	gnl\|CDD\|223732
NZ_FFHB01000001.1\|WP_003731262.1\|46146_46929_+\|type-I-B-CRISPR-associated-protein-Cas5	cas5	cd09658_cas5_CAS-I-B	gnl\|CDD\|273860
NZ_FFHB01000001.1\|WP_072217746.1\|53425_54430_+\|ROK-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224851
NZ_FFHB01000001.1\|WP_003721310.1\|49488_49767_+\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_FFHB01000001.1\|WP_003731259.1\|42883_43606_+\|CRISPR-associated-endoribonuclease-Cas6	cas6	pfam01881_cas6_CAS-I:CAS-III	gnl\|CDD\|273848
NZ_FFHB01000001.1\|WP_003721301.1\|39686_40118_+\|universal-stress-protein	unknown	unknown	gnl\|CDD\|366180
NZ_FFHB01000001.1\|WP_003731266.1\|56839_57283_+\|hypothetical-protein	unknown	unknown	unknown
NZ_FFHB01000001.1\|WP_003727297.1\|41715_42531_-\|histidine-phosphatase-family-protein	unknown	unknown	gnl\|CDD\|223483
NZ_FFHB01000001.1\|WP_003726690.1\|55980_56733_+\|MurR/RpiR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224651
NZ_FFHB01000001.1\|WP_003731263.1\|46996_49186_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124

Protein	Function_ID	Function_description	E-value
NZ_FFHB01000001.1\|WP_003731270.1\|61567_63064_+\|hypothetical-protein	gnl\|CDD\|227617	COG5298, COG5298, Uncharacterized protein conserved in bacteria [Function unknown].	0
NZ_FFHB01000001.1\|WP_003731261.1\|45299_46169_+\|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	gnl\|CDD\|274215	TIGR02585, conserved_protein, CRISPR-associated protein Cas7/Cst2/DevR, subtype I-B/TNEAP. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. This clade is a member of the DevR family (TIGR01875) and includes the DevR protein of Myxococcus xanthus, a protein whose expression appears to be regulated through a number of means, including both location and autorepression; DevR mutants are incapable of fruiting body development.	3.68641e-55
NZ_FFHB01000001.1\|WP_003731264.1\|51364_51733_-\|DUF1304-domain-containing-protein	gnl\|CDD\|226282	COG3759, COG3759, Predicted membrane protein [Function unknown].	1.68051e-41
NZ_FFHB01000001.1\|WP_003726689.1\|54462_55779_-\|6-phospho-beta-glucosidase	gnl\|CDD\|133432	cd05296, GH4_P_beta_glucosidase, Glycoside Hydrolases Family 4; Phospho-beta-glucosidase. Some bacteria simultaneously translocate and phosphorylate disaccharides via the phosphoenolpyruvate-dependent phosphotransferase system (PEP-PTS). After translocation, these phospho-disaccharides may be hydrolyzed by the GH4 glycoside hydrolases such as the phospho-beta-glucosidases. Other organisms (such as archaea and Thermotoga maritima ) lack the PEP-PTS system, but have several enzymes normally associated with the PEP-PTS operon. The 6-phospho-beta-glucosidase from Thermotoga maritima hydrolylzes cellobiose 6-phosphate (6P) into glucose-6P and glucose, in an NAD+ and Mn2+ dependent fashion. The Escherichia coli 6-phospho-beta-glucosidase (also called celF) hydrolyzes a variety of phospho-beta-glucosides including cellobiose-6P, salicin-6P, arbutin-6P, and gentobiose-6P. Phospho-beta-glucosidases are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.	0
NZ_FFHB01000001.1\|WP_003727299.1\|37756_39586_+\|lmo0514-family-class-1-internalin	gnl\|CDD\|380190	NF033186, internalin_K, class 1 internalin InlK. Internalins, as found in the intracellular human pathogen Listeria monocytogenes, are paralogous surface-anchored proteins with an N-terminal signal peptide, leucine-rich repeats, and a C-terminal LPXTG processing and cell surface anchoring site. Members of this family are internalin K (InlK), a virulence factor. See articles PMID:17764999. for a general discussion of internalins, and PMID:21829365, PMID:22082958, and PMID:23958637 for more information about internalin K.	2.70695e-122
NZ_FFHB01000001.1\|WP_003731268.1\|59129_59870_-\|MerR-family-transcriptional-regulator	gnl\|CDD\|133381	cd01106, HTH_TipAL-Mta, Helix-Turn-Helix DNA binding domain of the transcription regulators TipAL, Mta, and SkgA. Helix-turn-helix (HTH) TipAL, Mta, and SkgA transcription regulators, and related proteins, N-terminal domain. TipAL regulates resistance to and activation by numerous cyclic thiopeptide antibiotics, such as thiostrepton. Mta is a global transcriptional regulator; the N-terminal DNA-binding domain of Mta interacts directly with the promoters of mta, bmr, blt, and ydfK, and induces transcription of these multidrug-efflux transport genes. SkgA has been shown to control stationary-phase expression of catalase-peroxidase in Caulobacter crescentus. These proteins are comprised of distinct domains that harbor an N-terminal active (DNA-binding) site and a regulatory (effector-binding) site. The conserved N-terminal domain of these transcription regulators contains winged HTH motifs that mediate DNA binding. These proteins share the N-terminal DNA binding domain with other transcription regulators of the MerR superfamily that promote transcription by reconfiguring the spacer between the -35 and -10 promoter elements. Unique to this family, is a TipAL-like, lineage specific Bacilli subgroup, which has five conserved cysteines in the C-terminus of the protein.	9.74e-52
NZ_FFHB01000001.1\|WP_003727298.1\|40164_41595_-\|CapA-family-protein	gnl\|CDD\|225399	COG2843, PgsA, Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation) [Cell envelope biogenesis, outer membrane].	2.66378e-99
NZ_FFHB01000001.1\|WP_003731260.1\|43621_45310_+\|type-I-B-CRISPR-associated-protein-Cas8b1/Cst1	gnl\|CDD\|187884	cd09754, Cas8a1_I-A, CRISPR/Cas system-associated protein Cas8a1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins, some contain Zn-finger domain; signature gene for I-A subtype; also known as CXXC_CXXC family.	3.08159e-26
NZ_FFHB01000001.1\|WP_003727295.1\|51878_53294_+\|multidrug-efflux-MFS-transporter	gnl\|CDD\|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	3.97112e-80
NZ_FFHB01000001.1\|WP_003731267.1\|57328_58990_-\|SulP-family-inorganic-anion-transporter	gnl\|CDD\|223732	COG0659, SUL1, Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism].	7.67986e-148
NZ_FFHB01000001.1\|WP_003731262.1\|46146_46929_+\|type-I-B-CRISPR-associated-protein-Cas5	gnl\|CDD\|273860	TIGR01895, conserved_hypothetical_protein, CRISPR-associated protein Cas5, subtype I-B/TNEAP. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. This family is represented by TM1800 from Thermotoga maritima. It is related to TIGR01868 (CRISPR-associated protein, CT1976 family).	3.98256e-24
NZ_FFHB01000001.1\|WP_072217746.1\|53425_54430_+\|ROK-family-transcriptional-regulator	gnl\|CDD\|224851	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism].	5.54874e-21
NZ_FFHB01000001.1\|WP_003721310.1\|49488_49767_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	5.1393e-30
NZ_FFHB01000001.1\|WP_003731259.1\|42883_43606_+\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|273848	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This broadly distributed, highly divergent Cas family is now characterized as an endoribonuclease that generates guide RNAs for host defense against phage and other invaders. The family contains a C-terminal motif GXGXXXXXGXG, where the each X between two Gly is hydrophobic and the spacer XXXXX contains (usually) one Arg or Lys. The seed alignment for the current version of this model has gappy columns removed. Members of this protein family are found associated with several different CRISPR/cas system subtypes, and consequently we designate this family Cas6.	1.25848e-32
NZ_FFHB01000001.1\|WP_003721301.1\|39686_40118_+\|universal-stress-protein	gnl\|CDD\|366180	pfam00582, Usp, Universal stress protein family. The universal stress protein UspA is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. UspA enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae UspA reveals an alpha/beta fold similar to that of the Methanococcus jannaschii MJ0577 protein, which binds ATP, though UspA lacks ATP-binding activity.	4.03126e-27
NZ_FFHB01000001.1\|WP_003727297.1\|41715_42531_-\|histidine-phosphatase-family-protein	gnl\|CDD\|223483	COG0406, phoE, Broad specificity phosphatase PhoE and related phosphatases [General function prediction only].	4.22926e-50
NZ_FFHB01000001.1\|WP_003726690.1\|55980_56733_+\|MurR/RpiR-family-transcriptional-regulator	gnl\|CDD\|224651	COG1737, RpiR, Transcriptional regulators [Transcription].	7.01666e-64
NZ_FFHB01000001.1\|WP_003731263.1\|46996_49186_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	9.60751e-60

>NZ_FFHB01000001.1|WP_003721310.1|49488_49767_+|CRISPR-associated-endonuclease-Cas2
MYVILIYDISIENGGAKVWRNVFKICKKYLTHVQKSVFEGEITPALLVKLRMELDKYIRDDQDSVIVFSSRQQRWLEKEFWGLTDEKTSNFF
>NZ_FFHB01000001.1|WP_003731263.1|46996_49186_+|CRISPR-associated-helicase/endonuclease-Cas3
MQKYLAKSNPEETIQEHTDNLLKNYQRLKKLYPAVEIDWYLLELVCLLHDLGKMNLLFQTKLGNASGKGKEIPHGYLSVAFVPDSKLEEMGYSEDEIKVVYQAIARHHERKYDFSDSEWKKEIIKLEEQWAGFIYSQLGENAEYSSEVEMLYFYPGSRIFEGNSAADAETFKKYVLLKGLLNRIDFAASGGIDVELENDFLMDSMEVQLAHFKAENPEADWNALQKYMMQHQNENIVVIAETGMGKTEAGLLWLGNNKGFFTLPLRAAINAIYERITKNIVTTNQAERVGLLHSETYSQYLLHEGNAEMDIDEYYTRTRQMSLPITICTLDQLFDFVFRYAGFEHKLATLSYSKVIIDEIQMYSPDLLAYLILGLSYIDKFGGKFCIMTATLPGIVTDLLLENGVDFVQPEEKFVSSRIRHSMEMVHTEVESEFIKPFFNNNRILVICNTISKAKKIYSELKEHFQGEEIHLIHSQFIKRDRSAKEKAIFEDGQKDSTKKCIWVATQVVEASLDIDFDLLFTELSDVNGLFQRMGRCYRNRRLDVDTNVYVFDGGAKVCSGVGIDNFIDKLIFENSKTILNEHAGVLTEEKKMELVEQVYSTEALSGSKFYKELIRTINYVKAFESYLMNKADVRRRFRNINSVSVIPEEVWQDNAEEINSYFVTLRKTSKEISTKEKIIARTNLAEFMVSIPDYLYKKGESVVREINRYESVIEFKCGYSSDVGVFMR
>NZ_FFHB01000001.1|WP_003731262.1|46146_46929_+|type-I-B-CRISPR-associated-protein-Cas5
MLIMKAIRVKLWQDLVNFKKPTSFQLKETYPLPPYSTVIGMVHTLCGFTSYHEMKISIQGKYFSKVNDLATRYEFKNGMTYDASRHQIKVDKYGVSRGVSTVELLVDLELLLHIIPEDPSLVPIIEKAFREPIEFPSLGRREDIATIQKVEVVDVEKRQPKKSTEISDGYNAYVPISLTENNSVHFKSHESSVGRDKLLGTRYLLTEKYERVNHGTEKAPKFFRKWRKKDVIYSSRIFVSKKDVFFFDEDDYLVFIEEEE
>NZ_FFHB01000001.1|WP_003731261.1|45299_46169_+|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR
MKNKGLAMTIIFQAESANYGESLGNISSLKKISRNNGDQYTYISRQAIRYNLMDQIGEKEAPVKAEGGGDKKVIQFLSEATITDFPELDFFGYLKTEKGSGGQKRSAKVRLSNAISLETFKGDLDFLTNKGQADKLNENMNIAQAEIHKSYYRYTMTIDLDQIGIDGEIALENKEKARRVKKLMDTVAFLYRDIRGRREDLKPLFVIGGVYDVKNPVFQNVVDVADNNIVIKNIKDLLTYEDIKENTRVGIIDGQFANSDEVKAELKAESVPAFFNDIKGKIDAYYESN
>NZ_FFHB01000001.1|WP_003731260.1|43621_45310_+|type-I-B-CRISPR-associated-protein-Cas8b1/Cst1
MRTEIEVRANDWLINAGLIGFLNIVGKENVRIDGQSIYFTADLLEDFETKYFNFFIQEFKETLSWYKIVSYKETMEQFRIDEFASFDEVALGNLNKYMKDVVKFYLKKVNYIKVFPLIDPSANVTKWLENLNTINLTKKQRWDEVKADIIEEVKQTYTQLDLIIDFCASEKGLQYLGAKNLIYSVINKGWSGVSFLFKQTKFIDPYLDYKTTFVDSVLDYLDTDLSKAKYNCFNCNQPIKNLKLDLSFMNDVGFDTARKTSHVWDFNNDVATCPICRLIYSCVPAGFTYVYGEGMFVNDSYGVEELHRVNERMRNSILSFNQDGINSTNTYRALVESITMEHENNRRYELADIQLVRYENEHYRFNLLSKKMLHIVNDSKGILKGLIRCGYKEGNLNVNLYKEVLQHLMNNENLFTLIHKLIYYKQTSVNGLYYNMGHVSGILDINTKFLKEMEVMTNISQNQLWFVQNCGKEFKEGYVKKKSENKISGITYKLLNSLKVNDKDGFMDTLLNSYSYLAMPIPDVFIKMFSDNEAFKSVGYAFMLGVGGEKTKKEDGGNTDEK
>NZ_FFHB01000001.1|WP_003731259.1|42883_43606_+|CRISPR-associated-endoribonuclease-Cas6
MRLKINCDFDSKIIPKDFQSKVVSLFKAGIMKSSPERYENLFGGNKHKQYTFSVYLPKPQNKGAEIQLNEANCIINFSTGDAETGIIFYNALISLRGSKILFGAGNNITIKNIQIVPEKKIIGNRTILRTLSPVVSRDHNRETFKNWFYSFEDEEFEPTLKRNMLPYLIDAFGEQARYDLEKLKITPISMKKVVVYCHEIHIESSVGIFELEAEAYLQKYLVENGLGTMTGSGFGMIEQL
>NZ_FFHB01000001.1|WP_003727297.1|41715_42531_-|histidine-phosphatase-family-protein
MKKNIFKLMMALCAVLLIAGCGNSTSADKKETKETKEDGTVTFYVVRHGKTMLNTTDRVQGWSDAVLTPAGEEVVKSAGKGLKDVDFSAAYSSDSGRAIQTANLILKESDKSADKEVQTDPRFREFNFGSYEGDLNENMWTDIAKSQGKTLEEWQKAGISPKDFADSVAALDKTRVKEGENWPAEDYATIQARLKEGLTDVAKKESKNGDSNVLLVSHGLSIGALLDTIEPGYKLPAEGIKNASVTKITYKDGKFTIGDVNDLSYVEKGSK
>NZ_FFHB01000001.1|WP_003727298.1|40164_41595_-|CapA-family-protein
MKRRTYVIITGLVLIFVAGAFWITNSTNQSDQKATQTEPLKKTSPANVKTISSEAKKTLNSLASSGADKASISDLNQLIKELKSYPVEKNDSGAYLQNLTACLEAVKSYTTGKTDEKTLGKVYPAFLASEQKLSAIEKTNQYDWFYAAAATNQQGLKEKGVVTLTMVGDNSFGTYPETPEHLKFDNVFQKNNGNNTYVYKNCLPWFKSDDYTVINAESAFTNATKAENKKWRIKSDPAHVAFLPASGVEAANLANNHTMDYFQVGYDDTLKAFKENNIPVFNTDAPLETTIKGMKTVLLGYDCRMSQQSPAYLERIVKDVKKYKKENTLVIVNMHWGVEYRETPTDYQTQFGHAILDAGADIIMGSHPHRLESVEKYKDKYIVYSMGDFAFGADPTLLSRMTSMFQLRFTKEDNKIVLKDISIVPTYENSDGSTTENNYQPLPVFGDDAKKIVDELNRISKPIEGGVTEYTYFDPF
>NZ_FFHB01000001.1|WP_003721301.1|39686_40118_+|universal-stress-protein
MEKYHRILVAVDGSEPAKLAFEKGLELALKLDGVLGIASIVDLRAFSPNVSYDGSLEEKAELELKTSVNEYAEKARTAGVKQVETFVAKGNPKILLSTDIPAEFQADLIICGATGMNRVEKLVLGSVSSYIMAHAICDTLIAR
>NZ_FFHB01000001.1|WP_003727299.1|37756_39586_+|lmo0514-family-class-1-internalin
MKKALKLFLATICMFIMIYPSTAAHAEETNIVNIPDANLKTYLNGLLKQASDAPITKTQMNTIQTVTLSGSTYTDLTGLEEAGNLVTLSLNNTNIQTLEPIKNQTSLTYLTVGGDNVKDSLFVDLNGLVNLQSLSISGSEVTHNVFKTFNKLPKLTYLYAQNSMKITDISALASLPALTTLFLQFDGIDDFRPLNDFESFKNGNLKALAAFGQNTGRTNPRITLKSGKLDYNETNQTLYLPFSMMPKPLTSFDGTVAPFSKSTSASNTYLGFNDVALPSARLSITDDGITVSGVTKEEFDNLDEIEYNARYDFPTGSYPTPPSMNSYTISSGTYDQYFDISHTLDLTADESFDYNQYDATSEEQFLKDVHAETDDGTAVKSDFDQVVKLDVPGEYTVTLNAENAAGLKATPVTVKVTVHEKPVITADSQISYKKESTKSVDEFLQEIHSSVTGNAVLTSDFDKVVDLNTPGEYTVTLNAINDRGQKADPVTVVVTVTTSDGGHVNPVPPTPEVKPTPQEETDPTIIPEPQSENSEDPVKENNAKTEEKANKTSLTTKENKVEKADKAEKTNQPKTKALPQTGDTNKSTLPIAGVMLSLAALLIFRKSKS
>NZ_FFHB01000001.1|WP_003731264.1|51364_51733_-|DUF1304-domain-containing-protein
MAILAFILTFIVMIEHIYIMILEMFFANTNLAAKTFGVEKELLANKKVQTLFANQGLYNGFLAAGLVWGLFFAGAGMAETVQIFFLSCVVVAALFGGATSSKGILVKQGLPAVLALVVVLLV
>NZ_FFHB01000001.1|WP_003727295.1|51878_53294_+|multidrug-efflux-MFS-transporter
MQQEATGGQKIRPIPIIASFLMAGFIGLFSETALNMALSDLIQVFDISSATVQWLTTGYLLTLGILVPISGLLLQWFTTRGLFFTAVSFSIAGTLIAALSPTFAMLMIGRVVQAVGTALLLPLMFNTILLIFPEHKRGSAMGMIGLVIMFAPAVGPTISGLILENLTWNWIFWISLPFLIIALLFGMKFMQNVSVVTKPKIDILSIILSTLGFGGVVFAFSSAGESGWGSATVLVSIIVGGLALGLFVWRQLTMEKPLMDLKVFKYPMFTLGLILVFISFMMILSTMILLPLYLQNSLALAAFSAGLVLLPGGVLNGLMSPFTGRLFDAYGPRALVIPGFIVAVVALFFLTRIEVGTSALTIIVLHSVLMIGISMVMMPAQTNGLNQLPPKLYPDGTAIMNTLQQVSGAIGTAVAITIMSAGQKAYMETAQGVGPEQMVASLTAGIQNAFVFGLIMACIGLLCSLFIRKAK
>NZ_FFHB01000001.1|WP_072217746.1|53425_54430_+|ROK-family-transcriptional-regulator
MAIPRDLKELNKKNIKSILRQQGAMTKAEIAEVTGLSVVTVNKLIRDLVENDEILEQDNSVATGGRRAVSYEINPNFQQVLVISLQEKWKKITYSFSVYNLLGEPEFVEDMSGEDLDITALKRNTKDLVCAFPKISCVVIGVPGIEIGGKLRAMDFPLLLNVQLRETLEAEVNLPVLVETDTNAAILGYKNRPVKEENIVGLYYPERFPPGAGLLMNGEILKGQNGLAGEIKHMPLQVDWDNFDFSVDEIKAHIRKMVLLTMSFYDPETIVLYTNFYFGQKDFTEELTEELKQVYPYAVLPEIVLSRKFTTDYRIGLLAFGIDYLENNMTDWRI
>NZ_FFHB01000001.1|WP_003726689.1|54462_55779_-|6-phospho-beta-glucosidase
MTKGIKIATIGGGSSYTPELIEGFIKRQDELPVRELWLVDVEAGREKLEIVGNLAKRMVEKAGVDMEVHLTLDREEALKDADFVTTQLRVGLLDARVKDERIPNSYGVVGQETNGPGGMFKGLRTIPVILDICKDMERLCPDAWLINFANPAGMVTEAVLRYSNQKKVVGLCNGPIGIERNIAETLGVDVSEIYVEFVGLNHMVFAKTVYHNGKDVTKDVVFKMTEDEAGSSLKNINATGWDKTFLRTLNMIPIDYLRYYWQTKQQLEDQARAYAEHGTRAEVVKKVEAELFELYKQEELAEKPKQLEQRGGAYYSEAACNLINSIYNDKRDIQIVNTRNNGAILDIDPDSAVETNCVITRQGPIPLASGRLPIAINGIIQEIKTFERLTAEAAVTGDYDKALLAMTINPLTPSESVAREMLDELLEAHKEYLPNFFK
>NZ_FFHB01000001.1|WP_003726690.1|55980_56733_+|MurR/RpiR-family-transcriptional-regulator
MLFLDKNLELNDTELDIYNYIVANLDKVVYMRIRDLATEAHVSTTTILRFCRKFGCNGFSEFRVKLQLYLEEQKLAQIDMADETTYIDFLKRTAQPEFKAQIQNAVEILRDRELVLFAGVGSSGVIAEYGAIYFSSLFTLALHIEDPLNHPFYHLSSKLSDKICMIAISVEGENEDIIRYIHQLKAQNCKVISITNSAKSTIARLSDANIAYYINKEMYQEANITSQLPALYTIENIAREIRTQIDKEKM
>NZ_FFHB01000001.1|WP_003731266.1|56839_57283_+|hypothetical-protein
MYSNRKEKVVFTLIMCSLMILCMSSYNIFLENGIGANSFMIILKAFVPFLFIGFLLDFFVVGKIVYRLHAHLVSEDASKFKKIIMMQLLMVTFMCVLMSTLSLIVNQGEWSHLGILILRNYFVALFLQIFIVSPFVRLISPRIFALL
>NZ_FFHB01000001.1|WP_003731267.1|57328_58990_-|SulP-family-inorganic-anion-transporter
MFKHILLSLNGYKISYLRNDVISGVGVAALTIPVAMGYAQVAGLPPIYGLYASFLPVIAYVIFASSPQLVFGIDATASAITGSIILGTAGLAAGSKEAIALAPILAFFCAIFLVLFSVLKLGRFAKYISAPVLSGFISGLSVSIIMGQIPKIMGLKESGDSFFSSLGIIFGQFFQSNWISFAMGVVTVIIVITCKKVIPKIPMSLVVLILGTMAAYFFKLDQYNVDIVGKIPVGFPSLALPDFGASSWALAIGGGLVCAIATFAGSLLPSESFAMRNKYTIDDNRELFAYGISNFVAAFSGCSPASASVSRTAANEQFRGKTQMVSIVAATIIALIVAFLSGLLYYMPQPVLSGIVFAALVGIIDVDVLKGLFKVSRREATVWIVAALGTLLVGVIFGVLLGIFLSFINVVSRSMKSPIAILGVIEGRHGYFDLKRKPEAKPIPNVVIYRYSASLFFGNFNKFADGLKEAVQDDTKLVIFEASAIINIDTTATESMKDLLKWLDDKGIEYYFADLIDHLKTSFRKHDLGYIIDNGYTKKTVEDALEAYYAEHK
>NZ_FFHB01000001.1|WP_003731268.1|59129_59870_-|MerR-family-transcriptional-regulator
MQIKELAELTGVSVRTLHHYDKIGLLVPQKDDRNGYRIYSENDVDKLQQILFFKELDFPLKKIKQILDDPFFDKNVALDLQRHLLIEKKQRIETMLATLDQTIRNEKGEITMTNKEKFTGFDFSTNPYEEEAKKRWGDKVVEKANEKVNNMNEKEKLTLKESFDAEFRHLASVRELSPESEEAQLAIDHFFHYLNDTHGNIYSLEAFADLGEMYVADERFTKNIDQFGDGLSHFLKEAMNIYAKNK
>NZ_FFHB01000001.1|WP_003731269.1|60099_61575_+|hypothetical-protein
MIGKVKSISMWLWHHLTPQIFAVICVFIITLIALFMPPYIGMADNGDFFRIFSSNGLFVNNTNYDALQFGHFVKEFGIYQYFNENQVAIYSSQSIFIQMALLLNKLFWSTTVFDVRFLGGLQLALLLPAIYLLVAGLTAKMKGWPGYVVAALTVFIFADTAYTAYFNSFFSEGLILIMMLYISAGFLLLYQHKYNDYAMLGLIFVASLILITAKQQNAPIAVVIAVCGILVFFIRKNRAFRISAAATFFVIFLSGVVMYAFIPGEFVTINQYQTMTRGVLLDSENPEKSLEEMGMNSEFALLKGTNFYQKYKMIDLDSKLMEKEFYPNYNFVTVLSYYLENPKQFGKMLDLSAQNSFSIRPFEMGNFEKATGYKFKEKTHFFSIYSDVKEKLAPAKFTFLILWALVFLICYGVSAFKHFREKNIRGMLLFDLVVLLIGSGFAVILVTIVGDGEADLTKHNFLFNVCFDLTMLIGAASLLEVYMKKRGERNA
>NZ_FFHB01000001.1|WP_003731270.1|61567_63064_+|hypothetical-protein
MRKKLIVSILLAFMIFVVGGHSAIAKSDDGVVVFYDSLATGTENEGNMDALLRMLNSLGKRVTIYSWEENPDLSQTSEIIVLQNKKDGLSNKWTNKLAKSKAKIAYIGGNPPTFLTDKLQLKTKAITEASITIQTQAGLSGKPQLVNETNLITSYKGTSFGEMDAAENGQAAYGVQAGNYAYAPLFQADNTSEFALMDVLKALFDIKTTTNQYAFITGVNPFIDFDLLKKTADTFYEKGIPFIVSAGPVFYNQDFQAARNYAEILRYVQAKNGTIMMNVPAVTYGDSPAGELEKIMQKSVHFFAENDVAPLGVTAELYWNFDKVYGVEGFAPFNTGILLPNQKIIHTTKVNNGSAFEKSPYSVANDFYATTTEGRNFPIDIAITYSFFDNEKELKAAAEELATDNISDFRFQDHGVKTNKDTIESSAGSLYINNQSVTLDGDLNYIKTKNKTVKQAGSLEGFFGYQNTFFTIVIVLSLGIIGVLFVFGYRLYMKKYMK

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_FFHB01000001_1	1.14\|50713\|36\|NZ_FFHB01000001\|CRISPRCasFinder,CRT,PILER-CR	50713-50748	36	NZ_FFHB01000004.1	35677-35712	1	0.972
NZ_FFHB01000001_1	1.18\|50970\|34\|NZ_FFHB01000001\|CRISPRCasFinder,CRT,PILER-CR	50970-51003	34	NZ_FFHB01000004.1	36286-36319	0	1.0

1. spacer 1.14|50713|36|NZ_FFHB01000001|CRISPRCasFinder,CRT,PILER-CR matches to position: 35677-35712, mismatch: 1, identity: 0.972

ctggttactcaactggcgacagtaatacacctcaat	CRISPR spacer
ctggttactcaactggcgacagtagtacacctcaat	Protospacer
************************.***********

2. spacer 1.18|50970|34|NZ_FFHB01000001|CRISPRCasFinder,CRT,PILER-CR matches to position: 36286-36319, mismatch: 0, identity: 1.0

agaagcgttagcggcattgttcgaaagtaattta	CRISPR spacer
agaagcgttagcggcattgttcgaaagtaattta	Protospacer
**********************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_FFHB01000001_1	1.2\|50070\|32\|NZ_FFHB01000001\|PILER-CR	50070-50101	32	DQ003642	Listeria phage A006, complete genome	16676-16707	0	1.0
NZ_FFHB01000001_1	1.4\|50060\|36\|NZ_FFHB01000001\|CRISPRCasFinder,CRT	50060-50095	36	DQ003642	Listeria phage A006, complete genome	16672-16707	0	1.0
NZ_FFHB01000001_1	1.5\|50125\|35\|NZ_FFHB01000001\|CRISPRCasFinder,CRT	50125-50159	35	MH341453	Listeria phage PSU-VKH-LP041, complete genome	31167-31201	0	1.0
NZ_FFHB01000001_1	1.9\|50388\|36\|NZ_FFHB01000001\|CRISPRCasFinder,CRT,PILER-CR	50388-50423	36	KJ094023	Listeria phage LP-101, complete genome	18341-18376	0	1.0
NZ_FFHB01000001_1	1.14\|50713\|36\|NZ_FFHB01000001\|CRISPRCasFinder,CRT,PILER-CR	50713-50748	36	NC_003216	Listeria phage A118, complete genome	18563-18598	0	1.0
NZ_FFHB01000001_1	1.14\|50713\|36\|NZ_FFHB01000001\|CRISPRCasFinder,CRT,PILER-CR	50713-50748	36	AJ242593	Bacteriophage A118 complete genome	18563-18598	0	1.0
NZ_FFHB01000001_1	1.18\|50970\|34\|NZ_FFHB01000001\|CRISPRCasFinder,CRT,PILER-CR	50970-51003	34	NC_003216	Listeria phage A118, complete genome	19172-19205	0	1.0
NZ_FFHB01000001_1	1.18\|50970\|34\|NZ_FFHB01000001\|CRISPRCasFinder,CRT,PILER-CR	50970-51003	34	AJ242593	Bacteriophage A118 complete genome	19172-19205	0	1.0
NZ_FFHB01000001_1	1.1\|49999\|37\|NZ_FFHB01000001\|PILER-CR	49999-50035	37	KJ094023	Listeria phage LP-101, complete genome	9186-9222	1	0.973
NZ_FFHB01000001_1	1.3\|49994\|37\|NZ_FFHB01000001\|CRISPRCasFinder,CRT	49994-50030	37	KJ094023	Listeria phage LP-101, complete genome	9186-9222	1	0.973
NZ_FFHB01000001_1	1.8\|50323\|36\|NZ_FFHB01000001\|CRISPRCasFinder,CRT,PILER-CR	50323-50358	36	KJ094023	Listeria phage LP-101, complete genome	17910-17945	1	0.972
NZ_FFHB01000001_1	1.1\|49999\|37\|NZ_FFHB01000001\|PILER-CR	49999-50035	37	MT500540	Listeria phage LP-HM00113468, complete genome	35729-35765	2	0.946
NZ_FFHB01000001_1	1.3\|49994\|37\|NZ_FFHB01000001\|CRISPRCasFinder,CRT	49994-50030	37	MT500540	Listeria phage LP-HM00113468, complete genome	35729-35765	2	0.946
NZ_FFHB01000001_1	1.13\|50648\|36\|NZ_FFHB01000001\|CRISPRCasFinder,CRT,PILER-CR	50648-50683	36	MH341453	Listeria phage PSU-VKH-LP041, complete genome	26132-26167	2	0.944
NZ_FFHB01000001_1	1.19\|51033\|36\|NZ_FFHB01000001\|CRISPRCasFinder,CRT,PILER-CR	51033-51068	36	MH341453	Listeria phage PSU-VKH-LP041, complete genome	41996-42031	3	0.917
NZ_FFHB01000001_1	1.8\|50323\|36\|NZ_FFHB01000001\|CRISPRCasFinder,CRT,PILER-CR	50323-50358	36	NZ_LR134403	Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence	227438-227473	4	0.889
NZ_FFHB01000001_1	1.21\|51164\|36\|NZ_FFHB01000001\|CRISPRCasFinder,CRT,PILER-CR	51164-51199	36	FW590615	JP 2010534058-A/25: ANTIBIOTIC RESISTANCE FREE LISTERIA STRAINS AND METHODS FOR CONSTRUCTING AND USING SAME	3844-3879	4	0.889
NZ_FFHB01000001_1	1.21\|51164\|36\|NZ_FFHB01000001\|CRISPRCasFinder,CRT,PILER-CR	51164-51199	36	HI504184	Sequence 26 from Patent EP2147092	3844-3879	4	0.889
NZ_FFHB01000001_1	1.21\|51164\|36\|NZ_FFHB01000001\|CRISPRCasFinder,CRT,PILER-CR	51164-51199	36	AJ417489	bacteriophage U153 int gene for U153 integrase	3844-3879	4	0.889
NZ_FFHB01000001_1	1.19\|51033\|36\|NZ_FFHB01000001\|CRISPRCasFinder,CRT,PILER-CR	51033-51068	36	KJ094023	Listeria phage LP-101, complete genome	32760-32795	5	0.861
NZ_FFHB01000001_1	1.16\|50841\|34\|NZ_FFHB01000001\|CRISPRCasFinder,CRT,PILER-CR	50841-50874	34	NC_022111	Prevotella sp. oral taxon 299 str. F0039 plasmid, complete sequence	1764851-1764884	6	0.824
NZ_FFHB01000001_1	1.22\|51229\|35\|NZ_FFHB01000001\|CRISPRCasFinder,CRT	51229-51263	35	MN694189	Marine virus AFVG_250M578, complete genome	47879-47913	6	0.829
NZ_FFHB01000001_1	1.21\|51164\|36\|NZ_FFHB01000001\|CRISPRCasFinder,CRT,PILER-CR	51164-51199	36	NC_019743	Microcoleus sp. PCC 7113 plasmid pMIC7113.08, complete sequence	4997-5032	8	0.778
NZ_FFHB01000001_1	1.5\|50125\|35\|NZ_FFHB01000001\|CRISPRCasFinder,CRT	50125-50159	35	NZ_CP013615	Clostridium perfringens strain JP838 plasmid pJFP838A, complete sequence	176358-176392	9	0.743
NZ_FFHB01000001_1	1.16\|50841\|34\|NZ_FFHB01000001\|CRISPRCasFinder,CRT,PILER-CR	50841-50874	34	NZ_CP038863	Campylobacter jejuni strain SCJK2 plasmid unnamed1, complete sequence	39302-39335	9	0.735
NZ_FFHB01000001_1	1.22\|51229\|35\|NZ_FFHB01000001\|CRISPRCasFinder,CRT	51229-51263	35	MK448625	Streptococcus satellite phage Javan738, complete genome	5960-5994	9	0.743
NZ_FFHB01000001_1	1.22\|51229\|35\|NZ_FFHB01000001\|CRISPRCasFinder,CRT	51229-51263	35	MK448449	Streptococcus satellite phage Javan356, complete genome	4490-4524	9	0.743
NZ_FFHB01000001_1	1.22\|51229\|35\|NZ_FFHB01000001\|CRISPRCasFinder,CRT	51229-51263	35	MK448636	Streptococcus satellite phage Javan749, complete genome	6112-6146	9	0.743
NZ_FFHB01000001_1	1.22\|51229\|35\|NZ_FFHB01000001\|CRISPRCasFinder,CRT	51229-51263	35	NZ_CP045037	Lactobacillus mali strain LM596 plasmid unnamed2, complete sequence	34734-34768	9	0.743
NZ_FFHB01000001_1	1.22\|51229\|35\|NZ_FFHB01000001\|CRISPRCasFinder,CRT	51229-51263	35	NZ_CP018177	Lactobacillus hordei strain TMW 1.1822 plasmid pL11822-1, complete sequence	11325-11359	9	0.743
NZ_FFHB01000001_1	1.22\|51229\|35\|NZ_FFHB01000001\|CRISPRCasFinder,CRT	51229-51263	35	NZ_CP018181	Lactobacillus nagelii strain TMW 1.1827 plasmid pL11827-1, complete sequence	63608-63642	9	0.743

1. spacer 1.2|50070|32|NZ_FFHB01000001|PILER-CR matches to DQ003642 (Listeria phage A006, complete genome) position: , mismatch: 0, identity: 1.0

cagtacaagcaagggttattgagttaaatatt	CRISPR spacer
cagtacaagcaagggttattgagttaaatatt	Protospacer
********************************

2. spacer 1.4|50060|36|NZ_FFHB01000001|CRISPRCasFinder,CRT matches to DQ003642 (Listeria phage A006, complete genome) position: , mismatch: 0, identity: 1.0

attacagtacaagcaagggttattgagttaaatatt	CRISPR spacer
attacagtacaagcaagggttattgagttaaatatt	Protospacer
************************************

3. spacer 1.5|50125|35|NZ_FFHB01000001|CRISPRCasFinder,CRT matches to MH341453 (Listeria phage PSU-VKH-LP041, complete genome) position: , mismatch: 0, identity: 1.0

attaatgataagagcggaaagaaaactttcaaggg	CRISPR spacer
attaatgataagagcggaaagaaaactttcaaggg	Protospacer
***********************************

4. spacer 1.9|50388|36|NZ_FFHB01000001|CRISPRCasFinder,CRT,PILER-CR matches to KJ094023 (Listeria phage LP-101, complete genome) position: , mismatch: 0, identity: 1.0

aagttcaaaacctcccacacccgctatgaataaatt	CRISPR spacer
aagttcaaaacctcccacacccgctatgaataaatt	Protospacer
************************************

5. spacer 1.14|50713|36|NZ_FFHB01000001|CRISPRCasFinder,CRT,PILER-CR matches to NC_003216 (Listeria phage A118, complete genome) position: , mismatch: 0, identity: 1.0

ctggttactcaactggcgacagtaatacacctcaat	CRISPR spacer
ctggttactcaactggcgacagtaatacacctcaat	Protospacer
************************************

6. spacer 1.14|50713|36|NZ_FFHB01000001|CRISPRCasFinder,CRT,PILER-CR matches to AJ242593 (Bacteriophage A118 complete genome) position: , mismatch: 0, identity: 1.0

ctggttactcaactggcgacagtaatacacctcaat	CRISPR spacer
ctggttactcaactggcgacagtaatacacctcaat	Protospacer
************************************

7. spacer 1.18|50970|34|NZ_FFHB01000001|CRISPRCasFinder,CRT,PILER-CR matches to NC_003216 (Listeria phage A118, complete genome) position: , mismatch: 0, identity: 1.0

agaagcgttagcggcattgttcgaaagtaattta	CRISPR spacer
agaagcgttagcggcattgttcgaaagtaattta	Protospacer
**********************************

8. spacer 1.18|50970|34|NZ_FFHB01000001|CRISPRCasFinder,CRT,PILER-CR matches to AJ242593 (Bacteriophage A118 complete genome) position: , mismatch: 0, identity: 1.0

agaagcgttagcggcattgttcgaaagtaattta	CRISPR spacer
agaagcgttagcggcattgttcgaaagtaattta	Protospacer
**********************************

9. spacer 1.1|49999|37|NZ_FFHB01000001|PILER-CR matches to KJ094023 (Listeria phage LP-101, complete genome) position: , mismatch: 1, identity: 0.973

caatgcttaaaccgagagcatcaaattgttcccatgc	CRISPR spacer
caatgcttaaacctagagcatcaaattgttcccatgc	Protospacer
************* ***********************

10. spacer 1.3|49994|37|NZ_FFHB01000001|CRISPRCasFinder,CRT matches to KJ094023 (Listeria phage LP-101, complete genome) position: , mismatch: 1, identity: 0.973

caatgcttaaaccgagagcatcaaattgttcccatgc	CRISPR spacer
caatgcttaaacctagagcatcaaattgttcccatgc	Protospacer
************* ***********************

11. spacer 1.8|50323|36|NZ_FFHB01000001|CRISPRCasFinder,CRT,PILER-CR matches to KJ094023 (Listeria phage LP-101, complete genome) position: , mismatch: 1, identity: 0.972

cttcctactttttgacataaaaaataagccgagttg	CRISPR spacer
cttcctactttttgacataaaaaataagccgaattg	Protospacer
********************************.***

12. spacer 1.1|49999|37|NZ_FFHB01000001|PILER-CR matches to MT500540 (Listeria phage LP-HM00113468, complete genome) position: , mismatch: 2, identity: 0.946

caatgcttaaaccgagagcatcaaattgttcccatgc	CRISPR spacer
caatgcttaacccaagagcatcaaattgttcccatgc	Protospacer
********** **.***********************

13. spacer 1.3|49994|37|NZ_FFHB01000001|CRISPRCasFinder,CRT matches to MT500540 (Listeria phage LP-HM00113468, complete genome) position: , mismatch: 2, identity: 0.946

caatgcttaaaccgagagcatcaaattgttcccatgc	CRISPR spacer
caatgcttaacccaagagcatcaaattgttcccatgc	Protospacer
********** **.***********************

14. spacer 1.13|50648|36|NZ_FFHB01000001|CRISPRCasFinder,CRT,PILER-CR matches to MH341453 (Listeria phage PSU-VKH-LP041, complete genome) position: , mismatch: 2, identity: 0.944

gtccacatcgacaataaaaaacacattgtatcactt	CRISPR spacer
gtccacattgacaacaaaaaacacattgtatcactt	Protospacer
********.*****.*********************

15. spacer 1.19|51033|36|NZ_FFHB01000001|CRISPRCasFinder,CRT,PILER-CR matches to MH341453 (Listeria phage PSU-VKH-LP041, complete genome) position: , mismatch: 3, identity: 0.917

tataaaatattgcccaatgtgcggaaggagtttgga	CRISPR spacer
tataaaatattgtccaatgtgtggaaggagtttggg	Protospacer
************.********.*************.

16. spacer 1.8|50323|36|NZ_FFHB01000001|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR134403 (Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence) position: , mismatch: 4, identity: 0.889

cttcctactttttgacataaaaaataagccgagttg	CRISPR spacer
cttcctactttttgacataaaaaataagccttgctc	Protospacer
******************************  *.*

17. spacer 1.21|51164|36|NZ_FFHB01000001|CRISPRCasFinder,CRT,PILER-CR matches to FW590615 (JP 2010534058-A/25: ANTIBIOTIC RESISTANCE FREE LISTERIA STRAINS AND METHODS FOR CONSTRUCTING AND USING SAME) position: , mismatch: 4, identity: 0.889

gtgtaattcttaattccgtattgattcgctagtttt	CRISPR spacer
ttataatccttaattccgtattgatttgctagtttt	Protospacer
 *.****.******************.*********

18. spacer 1.21|51164|36|NZ_FFHB01000001|CRISPRCasFinder,CRT,PILER-CR matches to HI504184 (Sequence 26 from Patent EP2147092) position: , mismatch: 4, identity: 0.889

gtgtaattcttaattccgtattgattcgctagtttt	CRISPR spacer
ttataatccttaattccgtattgatttgctagtttt	Protospacer
 *.****.******************.*********

19. spacer 1.21|51164|36|NZ_FFHB01000001|CRISPRCasFinder,CRT,PILER-CR matches to AJ417489 (bacteriophage U153 int gene for U153 integrase) position: , mismatch: 4, identity: 0.889

gtgtaattcttaattccgtattgattcgctagtttt	CRISPR spacer
ttataatccttaattccgtattgatttgctagtttt	Protospacer
 *.****.******************.*********

20. spacer 1.19|51033|36|NZ_FFHB01000001|CRISPRCasFinder,CRT,PILER-CR matches to KJ094023 (Listeria phage LP-101, complete genome) position: , mismatch: 5, identity: 0.861

tataaaatattgcccaatgtgcggaaggagtttgga	CRISPR spacer
cattgaattttgcccaatgtgcggaaggagcttgga	Protospacer
.** .*** *********************.*****

21. spacer 1.16|50841|34|NZ_FFHB01000001|CRISPRCasFinder,CRT,PILER-CR matches to NC_022111 (Prevotella sp. oral taxon 299 str. F0039 plasmid, complete sequence) position: , mismatch: 6, identity: 0.824

agaaaaaaaacatctttccaatttgttgttttgc	CRISPR spacer
agcaaaaaaacatctttcctatttgttttatcac	Protospacer
** **************** ******* * *..*

22. spacer 1.22|51229|35|NZ_FFHB01000001|CRISPRCasFinder,CRT matches to MN694189 (Marine virus AFVG_250M578, complete genome) position: , mismatch: 6, identity: 0.829

ttttgaaatatgaggacttagaaaatgaaaaaaat	CRISPR spacer
taataaaaaatgagggcttagaaaatgaaaaaatt	Protospacer
*  *.*** ******.***************** *

23. spacer 1.21|51164|36|NZ_FFHB01000001|CRISPRCasFinder,CRT,PILER-CR matches to NC_019743 (Microcoleus sp. PCC 7113 plasmid pMIC7113.08, complete sequence) position: , mismatch: 8, identity: 0.778

gtgtaattcttaattccgtattgattcgctagtttt---	CRISPR spacer
gtgtaattcttactgccgtattgatt---taactctgaa	Protospacer
************ * ***********   **..*.*

24. spacer 1.5|50125|35|NZ_FFHB01000001|CRISPRCasFinder,CRT matches to NZ_CP013615 (Clostridium perfringens strain JP838 plasmid pJFP838A, complete sequence) position: , mismatch: 9, identity: 0.743

attaatgataagagcggaaagaaaactttcaaggg	CRISPR spacer
gaaattaaaaagagagcaaagaaaactttcaagga	Protospacer
.  * *.* ***** * *****************.

25. spacer 1.16|50841|34|NZ_FFHB01000001|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP038863 (Campylobacter jejuni strain SCJK2 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.735

agaaaaaaaacatctttccaatttgttgttttgc-----	CRISPR spacer
aagaaaaaaacatatttccaatt-----ttttccaaaaa	Protospacer
*..********** *********     **** *

26. spacer 1.22|51229|35|NZ_FFHB01000001|CRISPRCasFinder,CRT matches to MK448625 (Streptococcus satellite phage Javan738, complete genome) position: , mismatch: 9, identity: 0.743

ttttgaaatatgaggacttagaaaatgaaaaaaat	CRISPR spacer
gtatgaactatgaggacttagaaagtgaagacctg	Protospacer
 * **** ****************.****.*

27. spacer 1.22|51229|35|NZ_FFHB01000001|CRISPRCasFinder,CRT matches to MK448449 (Streptococcus satellite phage Javan356, complete genome) position: , mismatch: 9, identity: 0.743

ttttgaaatatgaggacttagaaaatgaaaaaaat	CRISPR spacer
gtatgaactatgaggacttagaaagtgaagacctg	Protospacer
 * **** ****************.****.*

28. spacer 1.22|51229|35|NZ_FFHB01000001|CRISPRCasFinder,CRT matches to MK448636 (Streptococcus satellite phage Javan749, complete genome) position: , mismatch: 9, identity: 0.743

ttttgaaatatgaggacttagaaaatgaaaaaaat	CRISPR spacer
gtctgaactatgaggacttagaaagtgaagacctg	Protospacer
 *.**** ****************.****.*

29. spacer 1.22|51229|35|NZ_FFHB01000001|CRISPRCasFinder,CRT matches to NZ_CP045037 (Lactobacillus mali strain LM596 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.743

ttttgaaatatgaggacttagaaaatgaaaaaaat	CRISPR spacer
ttaagaaatataaggacttagtaaatgaagttatg	Protospacer
**  *******.********* *******.  *

30. spacer 1.22|51229|35|NZ_FFHB01000001|CRISPRCasFinder,CRT matches to NZ_CP018177 (Lactobacillus hordei strain TMW 1.1822 plasmid pL11822-1, complete sequence) position: , mismatch: 9, identity: 0.743

ttttgaaatatgaggacttagaaaatgaaaaaaat	CRISPR spacer
ttaagaaatataaggacttagtaaatgaagttatg	Protospacer
**  *******.********* *******.  *

31. spacer 1.22|51229|35|NZ_FFHB01000001|CRISPRCasFinder,CRT matches to NZ_CP018181 (Lactobacillus nagelii strain TMW 1.1827 plasmid pL11827-1, complete sequence) position: , mismatch: 9, identity: 0.743

ttttgaaatatgaggacttagaaaatgaaaaaaat	CRISPR spacer
ttaagaaatataaggacttagtaaatgaagttatg	Protospacer
**  *******.********* *******.  *

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

614621 : 622043

Hokovirus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003730941.1\|614621_615005_+	glycerol-3-phosphate cytidylyltransferase	A0A1V0SGE7	Hokovirus	1.4e-16	40.7
WP_003727002.1\|615026_616010_+	glycosyltransferase family 2 protein	A0A1V0SAH6	Catovirus	2.0e-11	33.8
WP_003727001.1\|616024_617038_+	glycosyltransferase	A0A1V0SAH6	Catovirus	1.8e-10	31.2
WP_003721509.1\|617246_618737_+	nicotinate phosphoribosyltransferase	G3MA18	Bacillus_virus	9.5e-114	49.7
WP_003727000.1\|618748_619573_+	ammonia-dependent NAD(+) synthetase	G3MA24	Bacillus_virus	9.7e-68	52.6
WP_003724634.1\|619585_619894_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
WP_003724635.1\|619953_620358_+	PTS sugar transporter subunit IIB	NA	NA	NA	NA
WP_012681222.1\|620486_622043_+	glutamine-hydrolyzing GMP synthase	A0A1V0SH76	Hokovirus	2.3e-17	28.1

DBSCAN-SWA_2

716382 : 822985

116

Listeria_phage(71.43%)

capsid,protease,holin,tail,tRNA,integrase,terminase,portal

attL 723229:723245|attR 783150:783166

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003721619.1\|716382_717435_+\|tRNA	phenylalanine--tRNA ligase subunit alpha	A0A2I2L4E3	Orpheovirus	2.1e-27	36.0
WP_003730983.1\|717434_719843_+\|tRNA	phenylalanine--tRNA ligase subunit beta	NA	NA	NA	NA
WP_003721621.1\|720003_720705_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.0e-33	35.8
WP_003730984.1\|720718_724129_+	FtsX-like permease family protein	NA	NA	NA	NA
723229:723245	attL	NA	NA	NA	NA
WP_003724750.1\|724226_724679_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_003724752.1\|727998_728673_+	uracil-DNA glycosylase	A0A172DS90	Canid_alphaherpesvirus	3.4e-50	47.7
WP_012681263.1\|728710_729637_-	ribonuclease HIII	NA	NA	NA	NA
WP_003740576.1\|729790_730054_+	cell division protein ZapA	NA	NA	NA	NA
WP_003726937.1\|730053_730596_+	CvpA family protein	NA	NA	NA	NA
WP_003726936.1\|730687_732400_+	DNA polymerase/3'-5' exonuclease PolX	A0A2H4UV14	Bodo_saltans_virus	1.9e-17	24.5
WP_003726935.1\|732422_734780_+	endonuclease MutS2	Q94M10	Lactobacillus_phage	1.0e-21	50.4
WP_003723853.1\|734860_735172_+	thioredoxin	A0A1X9I9P5	Staphylococcus_phage	5.4e-19	39.6
WP_003726544.1\|735247_737059_+	excinuclease ABC subunit UvrC	NA	NA	NA	NA
WP_003726934.1\|737239_738454_+	aspartate kinase	NA	NA	NA	NA
WP_012681265.1\|738509_739004_-	YslB family protein	NA	NA	NA	NA
WP_003723856.1\|739151_739952_+	glutamate racemase	NA	NA	NA	NA
WP_003730987.1\|739964_740711_+	ribonuclease PH	NA	NA	NA	NA
WP_003730988.1\|740713_741325_+	XTP/dITP diphosphatase	NA	NA	NA	NA
WP_003726034.1\|741361_741886_+	metallophosphoesterase	NA	NA	NA	NA
WP_014930113.1\|742171_743326_-\|integrase	site-specific integrase	A8ATC7	Listeria_phage	2.0e-207	94.8
WP_003730990.1\|743455_744070_-	hypothetical protein	A0A059T7Z1	Listeria_phage	7.7e-78	77.0
WP_003730991.1\|744120_744573_-	ImmA/IrrE family metallo-endopeptidase	R4IBK9	Listeria_phage	4.8e-77	90.0
WP_003747248.1\|744589_744913_-	helix-turn-helix transcriptional regulator	R4IDX0	Listeria_phage	2.1e-34	69.2
WP_025370566.1\|745716_746040_+	hypothetical protein	NA	NA	NA	NA
WP_003730994.1\|746187_746391_-	hypothetical protein	NA	NA	NA	NA
WP_003730995.1\|746457_746649_+	helix-turn-helix transcriptional regulator	A0A059T5F8	Listeria_phage	5.4e-22	87.1
WP_003730996.1\|746670_746913_+	hypothetical protein	A8ATD2	Listeria_phage	3.9e-41	93.8
WP_023553860.1\|746915_747101_+	hypothetical protein	A8ATD3	Listeria_phage	5.4e-27	93.4
WP_009931096.1\|747335_747488_+	hypothetical protein	A0A059T7S2	Listeria_phage	3.4e-19	98.0
WP_031644438.1\|747675_748206_+	hypothetical protein	A0A059T5F9	Listeria_phage	8.9e-99	98.3
WP_031644439.1\|748214_748670_+	class I SAM-dependent methyltransferase	A8ATY8	Listeria_phage	1.7e-82	92.7
WP_014601511.1\|748674_749235_+	DUF1642 domain-containing protein	A8ATY9	Listeria_phage	9.4e-107	100.0
WP_014929526.1\|749231_749378_+	hypothetical protein	A8ATZ0	Listeria_phage	1.7e-20	100.0
WP_003731673.1\|749455_749917_+	hypothetical protein	D9J0I6	Brochothrix_phage	7.2e-12	29.9
WP_003731672.1\|749913_750147_+	hypothetical protein	NA	NA	NA	NA
WP_003731671.1\|750143_750374_+	hypothetical protein	NA	NA	NA	NA
WP_003731670.1\|750363_750630_+	hypothetical protein	NA	NA	NA	NA
WP_009933642.1\|750963_751137_+	hypothetical protein	A0A059T5G3	Listeria_phage	5.2e-24	100.0
WP_003731665.1\|751514_751994_+	siphovirus Gp157 family protein	R4IBM0	Listeria_phage	7.6e-57	76.7
WP_061729882.1\|752013_752703_+	AAA family ATPase	R4IDY8	Listeria_phage	8.3e-129	97.4
WP_072217948.1\|752781_754023_+	DEAD/DEAH box helicase	A8ATF1	Listeria_phage	3.5e-210	93.4
WP_010991280.1\|754048_754531_+	DUF669 domain-containing protein	A8ATF2	Listeria_phage	1.9e-87	99.4
WP_061729883.1\|754553_756842_+	DNA primase	R4IBW2	Listeria_phage	0.0e+00	94.7
WP_014601407.1\|757175_757493_+	VRR-NUC domain-containing protein	A8ATF4	Listeria_phage	9.2e-51	95.1
WP_003731659.1\|757494_757707_+	hypothetical protein	NA	NA	NA	NA
WP_023553835.1\|758216_758756_+	DUF3310 domain-containing protein	A8ATF5	Listeria_phage	8.6e-73	76.0
WP_025370581.1\|758752_759022_+	hypothetical protein	NA	NA	NA	NA
WP_003731656.1\|759050_759206_+	hypothetical protein	NA	NA	NA	NA
WP_061729884.1\|759266_759494_+	hypothetical protein	NA	NA	NA	NA
WP_031668027.1\|759506_759932_+	DUF722 domain-containing protein	A0A059T6H4	Listeria_phage	1.7e-68	92.9
WP_003731652.1\|760521_760836_+	HNH endonuclease	A8ATF8	Listeria_phage	3.2e-56	98.1
WP_031646261.1\|760884_761241_+\|terminase	P27 family phage terminase small subunit	A8AT94	Listeria_phage	2.6e-46	98.0
WP_023552366.1\|761237_762881_+\|terminase	terminase large subunit	A8AT95	Listeria_phage	0.0e+00	98.7
WP_023548926.1\|762892_764023_+\|portal	phage portal protein	A8AT96	Listeria_phage	1.7e-203	93.1
WP_031669132.1\|764019_764826_+\|protease	Clp protease ClpP	A0A059T5F2	Listeria_phage	3.8e-133	93.3
WP_003731647.1\|764852_766004_+\|capsid	phage major capsid protein	A8AT98	Listeria_phage	2.7e-201	93.2
WP_162859691.1\|766010_766181_+	hypothetical protein	A0A059T7Y2	Listeria_phage	3.1e-21	96.4
WP_003731645.1\|766190_766490_+	hypothetical protein	A8ATA0	Listeria_phage	5.3e-48	100.0
WP_003731644.1\|766473_766839_+	hypothetical protein	A8ATA1	Listeria_phage	1.3e-64	100.0
WP_003731643.1\|766835_767237_+	hypothetical protein	A8ATA2	Listeria_phage	2.1e-68	100.0
WP_012581456.1\|767233_767617_+	hypothetical protein	A8ATA3	Listeria_phage	3.8e-67	100.0
WP_031672556.1\|767638_768226_+\|tail	phage tail protein	A8ATA4	Listeria_phage	5.8e-107	99.5
WP_009917698.1\|768296_768629_+	hypothetical protein	A8ATA5	Listeria_phage	1.8e-52	99.1
WP_014589052.1\|768646_768829_+	hypothetical protein	A8ATA6	Listeria_phage	2.8e-20	100.0
WP_039153543.1\|768844_773656_+\|tail	phage tail tape measure protein	A0A059T5F4	Listeria_phage	0.0e+00	70.3
WP_023552371.1\|773643_775293_+\|tail	phage tail family protein	A0A059T682	Listeria_phage	1.5e-309	96.2
WP_061729885.1\|775308_777603_+\|tail	phage tail protein	A0A059T7Y6	Listeria_phage	0.0e+00	93.2
WP_061729886.1\|777592_778687_+	hypothetical protein	A0A059T7R4	Listeria_phage	4.3e-188	89.3
WP_012951557.1\|778737_779040_+	hypothetical protein	A0A059T5E6	Listeria_phage	1.7e-38	93.0
WP_003733521.1\|779039_779306_+\|holin	phage holin	A0A059T684	Listeria_phage	9.8e-38	93.1
WP_061729887.1\|779305_780154_+	M15 family metallopeptidase	A0A059T7Y8	Listeria_phage	2.0e-129	82.7
WP_012951560.1\|780257_781256_+	DUF3644 domain-containing protein	A0A0N9RUA4	Staphylococcus_phage	3.9e-71	44.8
WP_003769913.1\|781470_781677_-	hypothetical protein	A0A059T7Z0	Listeria_phage	1.3e-16	82.8
WP_009933529.1\|782266_782500_+	hypothetical protein	R4IDW6	Listeria_phage	2.8e-28	78.9
WP_009933528.1\|782496_782688_+	hypothetical protein	R4IBI5	Listeria_phage	8.9e-25	88.9
WP_003726037.1\|783414_783888_+	hypothetical protein	NA	NA	NA	NA
783150:783166	attR	NA	NA	NA	NA
WP_003726038.1\|783993_784356_+	hypothetical protein	NA	NA	NA	NA
WP_014929945.1\|785023_788713_+	MucBP domain-containing protein	NA	NA	NA	NA
WP_003727539.1\|788835_790194_+	DUF1254 domain-containing protein	M1HNU9	Paramecium_bursaria_Chlorella_virus	7.6e-09	21.6
WP_003726043.1\|790236_790830_-	YdeI/OmpD-associated family protein	NA	NA	NA	NA
WP_003726044.1\|790966_791374_-	glyoxalase/bleomycin resistance/extradiol dioxygenase family protein	NA	NA	NA	NA
WP_003731295.1\|791538_792138_+	histidine phosphatase family protein	A0A1X9IGJ2	Lactococcus_phage	1.0e-29	41.0
WP_003723543.1\|792169_792430_-	hypothetical protein	NA	NA	NA	NA
WP_003726047.1\|792553_793966_+	ATP-dependent RNA helicase DbpA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	4.9e-51	32.0
WP_003726048.1\|793990_794254_+	DUF3116 family protein	NA	NA	NA	NA
WP_003727535.1\|794421_794898_+	8-oxo-dGTP diphosphatase	NA	NA	NA	NA
WP_003726050.1\|794935_795181_-	hypothetical protein	NA	NA	NA	NA
WP_003731296.1\|795177_796383_-	MFS transporter	NA	NA	NA	NA
WP_003726052.1\|796587_797247_+	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA
WP_003726053.1\|797286_797481_-	hypothetical protein	NA	NA	NA	NA
WP_003726054.1\|797547_798396_-	YitT family protein	NA	NA	NA	NA
WP_003723553.1\|798725_798863_-	hypothetical protein	NA	NA	NA	NA
WP_003726055.1\|799013_799727_+	trehalose operon repressor	NA	NA	NA	NA
WP_003726056.1\|799757_801404_-	alpha,alpha-phosphotrehalase	NA	NA	NA	NA
WP_003727531.1\|801422_802907_-	PTS system trehalose-specific EIIBC component	NA	NA	NA	NA
WP_003731297.1\|803024_803486_+	NUDIX hydrolase	NA	NA	NA	NA
WP_003726717.1\|803524_803989_-	hypothetical protein	NA	NA	NA	NA
WP_003731298.1\|804177_805092_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_003731299.1\|805116_806364_-	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	2.7e-106	52.0
WP_003726720.1\|806347_807178_-	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	3.6e-46	42.4
WP_003727526.1\|807324_808464_-\|protease	PrsW family intramembrane metalloprotease	NA	NA	NA	NA
WP_003723563.1\|808543_808939_-	helix-turn-helix transcriptional regulator	A9D9J6	Lactobacillus_prophage	1.3e-14	57.4
WP_003727524.1\|809089_809305_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_003727523.1\|809428_809962_+\|protease	matrixin family metalloprotease	NA	NA	NA	NA
WP_003731300.1\|809977_810643_+	hypothetical protein	NA	NA	NA	NA
WP_003727521.1\|810904_811843_+	hypothetical protein	NA	NA	NA	NA
WP_003723884.1\|811957_813241_+	trigger factor	NA	NA	NA	NA
WP_003723886.1\|813425_814685_+\|protease	ATP-dependent protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	1.4e-145	63.2
WP_003726393.1\|814803_815370_+	type I signal peptidase SipX	NA	NA	NA	NA
WP_003731301.1\|815404_815974_+	type I signal peptidase SipY	NA	NA	NA	NA
WP_003727520.1\|816075_816618_+	type I signal peptidase SipZ	NA	NA	NA	NA
WP_003726396.1\|816627_817491_+	ribosome biogenesis GTPase YlqF	NA	NA	NA	NA
WP_003727519.1\|817487_818273_+	ribonuclease HII	G4YAY0	Emiliania_huxleyi_virus	6.7e-26	37.6
WP_003727518.1\|818406_819267_+	DNA-protecting protein DprA	S6BFL3	Thermus_phage	3.1e-40	47.2
WP_003727517.1\|819539_821618_+	type I DNA topoisomerase	A0A1V0SB35	Catovirus	5.4e-107	37.5
WP_003731302.1\|821680_822985_+\|tRNA	FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

4. NZ_FFHB01000006

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

18149 : 26994

Streptococcus_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003728469.1\|18149_21065_-\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	1.9e-174	36.7
WP_003728468.1\|21068_21623_-	recombinase family protein	A0A0F7LA37	Escherichia_phage	7.0e-38	53.4
WP_003728467.1\|21902_22262_+	Cd(II)-sensing metalloregulatory transcriptional repressor CadC	E4ZFI8	Streptococcus_phage	3.1e-26	50.0
WP_003728466.1\|22261_24397_+	cadmium-translocating P-type ATPase	E4ZFI9	Streptococcus_phage	1.6e-247	64.5
WP_003728465.1\|24589_24931_-	type II toxin-antitoxin system PemK/MazF family toxin	NA	NA	NA	NA
WP_003728464.1\|24924_25167_-	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA
WP_003728463.1\|25227_25479_-	hypothetical protein	NA	NA	NA	NA
WP_003728462.1\|25609_25936_+	hypothetical protein	A0A2K9V3N4	Faecalibacterium_phage	3.2e-06	40.8
WP_003731676.1\|25935_26598_+	DUF2786 domain-containing protein	NA	NA	NA	NA
WP_003769263.1\|26616_26994_+	DUF3850 domain-containing protein	C9E2N9	Enterococcus_phage	2.2e-14	55.1

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

5. NZ_FFHB01000003

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_FFHB01000003_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_FFHB01000003_1

254554-255138

Orphan

Consensus_repeat	Method
GATGTAAGTAATTTTGATACNAGTTCAGTAACTNATATG	CRT

7 spacers

The CRISPR arrays of NZ_FFHB01000003_1

>merge|NZ_FFHB01000003|1|254554-255138|CRT
GATTTGAGTGGTCTTGATACTAGTGCGGTAACTACTATGTGGGATATGTTTAACAGCTGTAGGGCACTTGAGGAACTGGATGTAAGTCATTTTGATACGAGTTCAGTAACTAATATGTCTTACATGTTTTATGATAATAGAAACCTTGAGGTGCTGGATGTAAGCAACCTTGATACCGGTTCAGTAACTAATATGTATGCCATGTTTGAAGATTGTACTAGTCTTGAAGAGCTGGATGTAAGTAATTTTGATACGAGTTCAGTAACTGATATGTATAGAGTGTTTAATGGCTGTGAAAAACTGAAGAAACTAGATGTAAGTAATTTCGATACCAGTTCCGCTACTGCAATGGTTCAAATGTTTAGAAATTGTAGCGCCCTTGAGAAGTTGGATGTAAGTAATTTTAATACGAGCTTAGTAACTGATATGCGTGCCATGTTTGCTGGTTGTACTAGTCTTGAAGCGTTAGATGTAAGTAATTTTGATACGAGTTCAGTAACTAATATGGCTGCCATGTTTTCTGATAATGAAAAACTGGAGAAGCTTGATTTAAGTACCTTTGATACCAGTTCAGTGACTAACATG

>NZ_FFHB01000003|1|1|254554-255138|CRT
GATTTGAGTGGTCTTGATACTAGTGCGGTAACTACTATG	TGGGATATGTTTAACAGCTGTAGGGCACTTGAGGAACTG
GATGTAAGTCATTTTGATACGAGTTCAGTAACTAATATG	TCTTACATGTTTTATGATAATAGAAACCTTGAGGTGCTG
GATGTAAGCAACCTTGATACCGGTTCAGTAACTAATATG	TATGCCATGTTTGAAGATTGTACTAGTCTTGAAGAGCTG
GATGTAAGTAATTTTGATACGAGTTCAGTAACTGATATG	TATAGAGTGTTTAATGGCTGTGAAAAACTGAAGAAACTA
GATGTAAGTAATTTCGATACCAGTTCCGCTACTGCAATG	GTTCAAATGTTTAGAAATTGTAGCGCCCTTGAGAAGTTG
GATGTAAGTAATTTTAATACGAGCTTAGTAACTGATATG	CGTGCCATGTTTGCTGGTTGTACTAGTCTTGAAGCGTTA
GATGTAAGTAATTTTGATACGAGTTCAGTAACTAATATG	GCTGCCATGTTTTCTGATAATGAAAAACTGGAGAAGCTT
GATTTAAGTACCTTTGATACCAGTTCAGTGACTAACATG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_FFHB01000003.1\|WP_003730797.1\|260995_261841_-\|carboxylating-nicotinate-nucleotide-diphosphorylase	unknown	unknown	gnl\|CDD\|181221
NZ_FFHB01000003.1\|WP_003728093.1\|246561_247662_+\|DUF917-domain-containing-protein	unknown	unknown	gnl\|CDD\|226065
NZ_FFHB01000003.1\|WP_003727955.1\|264534_265056_+\|transcription-repressor-NadR	unknown	unknown	gnl\|CDD\|224740
NZ_FFHB01000003.1\|WP_003725185.1\|238264_239020_-\|DUF4866-domain-containing-protein	unknown	unknown	gnl\|CDD\|379782
NZ_FFHB01000003.1\|WP_023553878.1\|249840_251379_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|368260
NZ_FFHB01000003.1\|WP_003733326.1\|258416_258902_+\|hypothetical-protein	unknown	unknown	unknown
NZ_FFHB01000003.1\|WP_014930657.1\|256100_257858_+\|BspA-family-leucine-rich-repeat-surface-protein	unknown	unknown	gnl\|CDD\|308794
NZ_FFHB01000003.1\|WP_003731687.1\|247654_249205_+\|hydantoinase/oxoprolinase-family-protein	unknown	unknown	gnl\|CDD\|223223
NZ_FFHB01000003.1\|WP_061729899.1\|251642_253700_+\|BspA-family-leucine-rich-repeat-surface-protein	unknown	unknown	gnl\|CDD\|308794
NZ_FFHB01000003.1\|WP_003731690.1\|239136_241296_-\|transglutaminase	unknown	unknown	gnl\|CDD\|376628
NZ_FFHB01000003.1\|WP_003740435.1\|258929_259235_+\|LPXTG-cell-wall-anchor-domain-containing-protein	unknown	unknown	gnl\|CDD\|273478
NZ_FFHB01000003.1\|WP_003725196.1\|257923_258397_+\|hypothetical-protein	unknown	unknown	unknown
NZ_FFHB01000003.1\|WP_003731689.1\|241292_242441_-\|DUF58-domain-containing-protein	unknown	unknown	gnl\|CDD\|224635
NZ_FFHB01000003.1\|WP_003730799.1\|263423_264530_+\|cysteine-desulfurase	unknown	unknown	gnl\|CDD\|224029
NZ_FFHB01000003.1\|WP_003721242.1\|242445_243393_-\|MoxR-family-ATPase	unknown	unknown	gnl\|CDD\|223786
NZ_FFHB01000003.1\|WP_003728992.1\|245277_246561_+\|cytosine-permease	unknown	unknown	gnl\|CDD\|271377
NZ_FFHB01000003.1\|WP_003730798.1\|261837_263292_-\|L-aspartate-oxidase	unknown	unknown	gnl\|CDD\|236147
NZ_FFHB01000003.1\|WP_003730795.1\|259308_259575_+\|hypothetical-protein	unknown	unknown	unknown
NZ_FFHB01000003.1\|WP_003740428.1\|243548_245144_+\|PucR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225306
NZ_FFHB01000003.1\|WP_003725774.1\|259898_260999_-\|quinolinate-synthase-NadA	unknown	unknown	gnl\|CDD\|236489

Protein	Function_ID	Function_description	E-value
NZ_FFHB01000003.1\|WP_003728093.1\|246561_247662_+\|DUF917-domain-containing-protein	gnl\|CDD\|226065	COG3535, COG3535, Uncharacterized conserved protein [Function unknown].	0
NZ_FFHB01000003.1\|WP_003725185.1\|238264_239020_-\|DUF4866-domain-containing-protein	gnl\|CDD\|379782	pfam16160, DUF4866, Domain of unknown function (DUF4866). This family consists of uncharacterized proteins around 250 residues in length and is mainly found in various human gut Firmicute species and abundant in human gut metagenomic datasets. The function of this family is unknown.	2.72643e-122
NZ_FFHB01000003.1\|WP_023553878.1\|249840_251379_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|368260	pfam05043, Mga, Mga helix-turn-helix domain. M regulator protein trans-acting positive regulator (Mga) is a DNA-binding protein that activates the expression of several important virulence genes in group A streptococcus in response to changing environmental conditions. This domain is found in the centre of the Mga proteins. This family also contains a number of bacterial RofA transcriptional regulators that seem to be largely restricted to streptococci. These proteins have been shown to regulate the expression of important bacterial adhesins. This is presumably a DNA-binding domain.	4.85465e-19
NZ_FFHB01000003.1\|WP_003727955.1\|264534_265056_+\|transcription-repressor-NadR	gnl\|CDD\|224740	COG1827, COG1827, Predicted small molecule binding protein (contains 3H domain) [General function prediction only].	1.22525e-70
NZ_FFHB01000003.1\|WP_014930657.1\|256100_257858_+\|BspA-family-leucine-rich-repeat-surface-protein	gnl\|CDD\|308794	pfam03382, DUF285, Mycoplasma protein of unknown function, DUF285. This region appears distantly related to leucine rich repeats.	3.73841e-28
NZ_FFHB01000003.1\|WP_003731687.1\|247654_249205_+\|hydantoinase/oxoprolinase-family-protein	gnl\|CDD\|223223	COG0145, HyuA, N-methylhydantoinase A/acetone carboxylase, beta subunit [Amino acid transport and metabolism / Secondary metabolites biosynthesis, transport, and catabolism].	1.16889e-106
NZ_FFHB01000003.1\|WP_061729899.1\|251642_253700_+\|BspA-family-leucine-rich-repeat-surface-protein	gnl\|CDD\|308794	pfam03382, DUF285, Mycoplasma protein of unknown function, DUF285. This region appears distantly related to leucine rich repeats.	3.00623e-29
NZ_FFHB01000003.1\|WP_003731690.1\|239136_241296_-\|transglutaminase	gnl\|CDD\|376628	pfam01841, Transglut_core, Transglutaminase-like superfamily. This family includes animal transglutaminases and other bacterial proteins of unknown function. Sequence conservation in this superfamily primarily involves three motifs that centre around conserved cysteine, histidine, and aspartate residues that form the catalytic triad in the structurally characterized transglutaminase, the human blood clotting factor XIIIa'. On the basis of the experimentally demonstrated activity of the Methanobacterium phage pseudomurein endoisopeptidase, it is proposed that many, if not all, microbial homologs of the transglutaminases are proteases and that the eukaryotic transglutaminases have evolved from an ancestral protease.	4.24069e-28
NZ_FFHB01000003.1\|WP_003740435.1\|258929_259235_+\|LPXTG-cell-wall-anchor-domain-containing-protein	gnl\|CDD\|273478	TIGR01167, Zinc_metalloprotease_ZmpB, LPXTG-motif cell wall anchor domain. This model describes the LPXTG motif-containing region found at the C-terminus of many surface proteins of Streptococcus and Streptomyces species. Cleavage between the Thr and Gly by sortase or a related enzyme leads to covalent anchoring at the new C-terminal Thr to the cell wall. Hits that do not lie at the C-terminus or are not found in Gram-positive bacteria are probably false-positive. A common feature of this proteins containing this domain appears to be a high proportion of charged and zwitterionic residues immediatedly upstream of the LPXTG motif. This model differs from other descriptions of the LPXTG region by including a portion of that upstream charged region. [Cell envelope, Other].	4.51255e-05
NZ_FFHB01000003.1\|WP_003730797.1\|260995_261841_-\|carboxylating-nicotinate-nucleotide-diphosphorylase	gnl\|CDD\|181221	PRK08072, PRK08072, carboxylating nicotinate-nucleotide diphosphorylase.	0
NZ_FFHB01000003.1\|WP_003731689.1\|241292_242441_-\|DUF58-domain-containing-protein	gnl\|CDD\|224635	COG1721, COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) [General function prediction only].	1.71221e-52
NZ_FFHB01000003.1\|WP_003730799.1\|263423_264530_+\|cysteine-desulfurase	gnl\|CDD\|224029	COG1104, NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism].	4.96124e-144
NZ_FFHB01000003.1\|WP_003721242.1\|242445_243393_-\|MoxR-family-ATPase	gnl\|CDD\|223786	COG0714, COG0714, MoxR-like ATPases [General function prediction only].	7.47241e-102
NZ_FFHB01000003.1\|WP_003728992.1\|245277_246561_+\|cytosine-permease	gnl\|CDD\|271377	cd11484, SLC-NCS1sbd_CobB-like, nucleobase-cation-symport-1 (NCS1) transporter CobB-like; solute-binding domain. This NCS1 subfamily includes Escherichia coli CodB (cytosine permease), and the Saccharomyces cerevisiae transporters: Fcy21p (Purine-cytosine permease), and vitamin B6 transporter Tpn1. NCS1s are essential components of salvage pathways for nucleobases and related metabolites; their known substrates include allantoin, uracil, thiamine, and nicotinamide riboside. NCS1s belong to a superfamily which also contains the solute carrier 5 family sodium/glucose transporters (SLC5s), and solute carrier 6 family neurotransmitter transporters (SLC6s).	1.15029e-95
NZ_FFHB01000003.1\|WP_003730798.1\|261837_263292_-\|L-aspartate-oxidase	gnl\|CDD\|236147	PRK08071, PRK08071, L-aspartate oxidase; Provisional.	0
NZ_FFHB01000003.1\|WP_003740428.1\|243548_245144_+\|PucR-family-transcriptional-regulator	gnl\|CDD\|225306	COG2508, COG2508, Regulator of polyketide synthase expression [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism].	2.42853e-59
NZ_FFHB01000003.1\|WP_003725774.1\|259898_260999_-\|quinolinate-synthase-NadA	gnl\|CDD\|236489	PRK09375, PRK09375, quinolinate synthase NadA.	7.8764e-150

>NZ_FFHB01000003.1|WP_061729899.1|251642_253700_+|BspA-family-leucine-rich-repeat-surface-protein
MKKFSMRVVLIISVLFIALGNANVSIAQERDTTNKLPEEELGSLDTSNLIAEEVAQEKPAEVENLEEIPTTDELMQNPEVREQPVADSDDPDLTAVSSGDYWTIYYNSANDEYSLRMFGNVPSSKPSAWNSYLKYIKHIEIEEATLTGDFSSYFRSNVFTVLESVRIERSNLSGVTSFARAFEGDSESESPLEKVIIRDNYYPETPSLTNISRMFTLCRKLSELDVSGLNTSSVTKMDTIFSNANSLKELDVSHFDTSSVTDMSSMFAACNSLEELDVSNFDTSSVTNMKYMLSGLHLKKLDVSNFDTSSVTNMYGMFAYCYNLEELDVSNFDTSSVNNMLHMFYVCNNLEELDLSNFDTSSVTNMFAMFAYCTSLKEIDVSNFDTSSVTTMSAMFFECSSLEALDLSNFDTSSVTTMASMFENSTALKSLYLDNFTDAASMTDMFKGTTSLTYLFVSHNLSTFNRLENTSWYDEKNWVQFSNLSQLQTYHRKQSEPTGYRKGAFLSLTMDAMGGEFEDAEEQKVQNKVSGEYWEEIVPVKEDYYFDGWYLDQNFTNKFDFSLPAAVSTTIYAKWVENYTVIIPASISLNEATELKVEGINRGSKALSVGLNRLATSVSESNELTLANTADTTVQCSAPLSWDGSENNPEKAILTLAPGSEITEGDAVMAIEAPENIQAEKYTGNL
>NZ_FFHB01000003.1|WP_023553878.1|249840_251379_+|helix-turn-helix-domain-containing-protein
MREYLDSKSQKKVALLEKIFYAENHTSTQEELLNDLNITYPTLISTIKTINFDIERFGYKAFSIVHSAPNLSYTLKISDNCSIQLIINAYIRESPKFQILETLLLSSFPNLQALAKKVHVSYSGIKKEIKELNEELRERNLYISTGNQVEITGDEFSLRIFYAFLFLVAYSGDRWPFSFVRYDEITDLLESCPKEIYRANSIDKAMMIHYYVAMHLLRDRMNCQIDTTRQFKVALYKACTEESKKSESAFIKKVAKQVPNRSYKEMTYTTQIILSTIVAFGSYSSIEKMPSFFYMDEQLEEMGFMKLVDFASEQVNDNLSIPFSEKEMELLRYSFASINYRYFLLDNLINKFNNIVPGYTDLDRNIRKIHKVNHLEPLISQLVNLKEMDPLKPFEERLTSDYLIILDKRIDFSIHTLPIKVTILSTISNETAVFDFMRYFSSYYNLEIINQVDPVVDLYISDFSVSPEVLTSLRINQPIIYVNTRWLESDYVKINDNLAKIARKKFIANKKN
>NZ_FFHB01000003.1|WP_003731687.1|247654_249205_+|hydantoinase/oxoprolinase-family-protein
MYKIGIDVGGTNTDAVILDENQQLIHSVKMPTSEDIETGITESLHRVLSETGIDRSKVTHAMLGTTQCTNAIVERKKLAKVGVLRLGYPATASVLPYTAWPEDMVGFLSGKYKLTGGGYEYDGQVLSEINEAEIRETLASWKGEVESVAVVGVFSSLKNDQELAVQKIIEEELGADIPVSISSSVGSVGLIERENATILNAALFKVIAATSDGFEKALEQEGIAHAEIYLCQNDGTLMSLNYARQFPILTIACGPTNSIRGASYLAGLKDAMVLDVGGTTSDIGVLTDGFPRESSLAVDVGGVRTNFRMPDIISIGLGGGSIVREKDGDITIGPDSVGYRISEEALVFGGKTMTTTDIAVRLGRAEIGNPELVAYIPTDFAEKAYKKIAEMTEDAIDKMKTSSGSVSLVLVGGGSVIIPDEISGVAQIFRDKNGPVANAIGASISQISGQYEQIYIYSQIEREEALQDAEQKAREQATLAGAVTDSIEVVEVEEIPLAYHPGNATRLRVKVVGNLV
>NZ_FFHB01000003.1|WP_003728093.1|246561_247662_+|DUF917-domain-containing-protein
MRYLDEQAIENIAIGAAFLGTGGGGDPYIGKMMALTAIKKHGPIKLLSPEEIADDDYFIPAAMMGAPSVLIEKFPKGDEFVRVFEKLGRYVGKEVKGTFPMEAGGVNSMIPIVVAAQLGLPMVDCDGMGRAFPELQMVTFHLDGISATPMAITDEKGNIGIMETIDNKWTERLARVTTVEMGASSLVSLYPCNGAQIKQSSIKNIVTLSEEIGKVIRETSMDEAEKLQKLLDVTHGYHLFEGKITDVVRETRAGFNFGRVKIDGLNKDTGSEVIVHFQNENLVAEKNGEPIAITPDLICMVDLETLMPVTTEALKYGKRVRVMALPADDAWRTDKGIETVGPRYFGYDVDFEPLEELVKKEERRHV
>NZ_FFHB01000003.1|WP_003728992.1|245277_246561_+|cytosine-permease
MTEKKSVEQTQSWQSLAFVWTGAMICVPSLLVGGTLISGMPLWEAILIALLGYGVIVLFMIYQGMQSSDLGIPAVSVASQVFGEQGSKKIISILLAIACLGWFGIQANVCGAAFSQFLGIYGINLPVPVSSLIWGVIMLLSAIYGIRILSILNYIAVPVLLFVCIYGLVVSLNDGGLAIVENYKPAGSMSFMTGLAITIGSFALGAVIAGDYSQYTKSRKDVVKAAIVGILPSGVLMITVGAVLALTAGTADISVVFTNLGLPVLGIIGLILAAWTTNAVNAFSGGIAIINVFNISEKYHKVAVAVAGGLGTILAVIGILNHFVPIMSVLSAMVPPVAGVMIASYWIVQKGDKSKWAPVSGVNWLGVSSWLVGAVIAGIPVILTFFPELPQLPNQPLIGIILSLAVYLIGAKVLSGKTNNVENLEGK
>NZ_FFHB01000003.1|WP_003740428.1|243548_245144_+|PucR-family-transcriptional-regulator
MSVKLADLMKLPSLKEAKVVSGKSGLSKLVSSISVLEYTEVALLEDDLFDNDEFYGSEIVVSAFVNIRDDVEAQCRTIERLHKVGEVALILYYVGIFVPKMDQKLIDFANELDFTIIVMPENEMSLRYSEVIYEVVEAIVKQEMTDTNFVTESLEQISSVRPPQRNIDTTLKILSDRTHTSLVLTDNSFQVINSITWPRTRHWDFERIIEASKQIGEHELVQLTLDERDFYTARKPIFQDGMQAMHLFMMKEKGVLTADVVMQITEVVQVFMNLWGRNYVEISTAELMKAILNDESVKMRRLGKILNVDVSSIKWMWLVKTEEIRDNEQVLAELKSFVASHFQVSLIDLFEDNIVVLLDNSVAQRDRTHTANEFAMMMKEHGIDLKITVCQGMEQTSDVQSAYSLVNEYKNAANAIYANKSIYSLQEIDFAAKCVEIVDRGELAIAEQMRPLKPLEDNDELIETLSVFLLEGESNYNQAAELLFLHKNTIKYRIQRINELLQYPATKIPESYNLYLAVAIRRILGGNNNNK
>NZ_FFHB01000003.1|WP_003721242.1|242445_243393_-|MoxR-family-ATPase
MSIEPSIKIEEIINEVEKVIVGKRHVVKLSLTALLAGGHVLLEDVPGVGKTMMVRTLSKTIGVSFKRIQFTPDLLPADVTGVSIFNPETRDFEFRPGPVMGNIVLADEINRTAPRTQAALLEGMAENSVTVDGITRKLANPFFVMATQNPIEYEGTYALPEAQLDRFLLKINIGYPTVEEEMQLLTLKQYQDPLDQTQQVVTLSELLDLKNKAKQVFIDDVLKNYIIRLVDATRKHPSVALGISPRGSLAFMQAAQAFALIEGRDYVIPDDIQYLAPYIFTHRLILKSEAYYNEETAESIIASILKNTSVPVEKR
>NZ_FFHB01000003.1|WP_003731689.1|241292_242441_-|DUF58-domain-containing-protein
MLKKRLLLAFRWIIMLIIYAGLWTYTLFQGDTASWFLTYFFSFILLLLFLSSIYPLKAWKVNRRFVKNTYHDGDLIDMQVSFTRKSRYPVGYLLFQQKIPASFGNVSARQQVVYPLFKKHFTVTLAGFVGVRGIHSFPPVDVETSDAFGLLERSRQLSSEKSLTIYPTYFPDVLEKISEASPENERNAAYWTLKKNSNLHSLREFSSGDRISLIDWKSSAKSDQLMTREFENSATSRLSVIFYGASHPNFELSLRAAYSFIRKISEDNGEIRVTLLGDQTSKFAPAKGTSKLQDISTAFAEIAPVDNLTLQESLDSNLHSGEKILLFTPCIDTMLMQKVTRLTDNKQLQIITFQSEHSKAMDAPAIFLEPASLLSRWEREAK
>NZ_FFHB01000003.1|WP_003731690.1|239136_241296_-|transglutaminase
MKRYLTLVMLFILSVLLISEWIYPFAELTELSKANWIILFITLSLGSFFLRLKYYWTIPLHIVMIIFVSGIYYAKGGILAGNWFVSFFQITFNGFRDMVQFRSSDISMDFILIVFLIALWLLSYITTYSILRKQRVMSVLVLTVAYLAVINTFTDYNSNWAIVRTVLEGFLLLHLALASRIAAPNRISADSLKRNGLFYHIFVILLLAVFVFSSLMLPKKAPIFPDPVPTIKNALGINTTRTVGYSEDDTTLGGALKKDNATVFTARAEKGHYWRVESKTVYTGTGWANANSADVISFSSGDNFPIQLTEQTTGATNTAEISFASSNDYMPYPYGTQTVNGAVDSFSANLTIERVGPVDTIKNYTVQLKTPVYNIEKMQNADFSTLSNAFVSQYTQTPKDLPDRVTKLANKVTKDADSIYDKTKAIERYLSASGTFTYSTEDAKETPRGADYVDQFLFETQIGYCDNFSTSMVVMLRSLGIPARWAKGYTPGEGEKKENDAKTTYTITNNNAHSWPEVFFPGTGWVPFEPTATFSNPENFQEPTTETANKPETPNDSTSTPETPNTADKTPEQDNGSSSTGETPKKEEPKTETAASNFEIPSWVWWIPAGLVVTLLALAIIFRRRIRRYLLLRSLRNSPEFGKTYHRLMKLLASYGYVRESSETLRHFSTRVDAELTTTEFSRLTKMYEAQIYSNNLTEKVITAEETQLVQQVIARLTK
>NZ_FFHB01000003.1|WP_003725185.1|238264_239020_-|DUF4866-domain-containing-protein
MTTIFPKEQNVAPLFEQILANPTACRRFKDVFLDNLESYQETRGFEKDDTLFAKIILSAYRQSDVSALLLGVCGRTLFELLRQAFLIPKKLTVDNPFFLTDKEGNFIAKKDDISNREQEKFQEIYQSDLHHSETTIFLVDDDDIVHSYEPDFSISTKRINKKRGILVLYSLPDTLKLGMTESEVYAFIWKTFLHIQEIIPSSRIFYGQETSENADELGVFLPIHHFEKKMLQNIEQVNELVDALREQMVNK
>NZ_FFHB01000003.1|WP_014930657.1|256100_257858_+|BspA-family-leucine-rich-repeat-surface-protein
MKKFSMRVVLIISVLFIAFGSANVSIAQERDTTNKLPEEELGSLDTSNIIAEEVAQEKPAEVEQLEEIPITDELMQNPDVLEQPVADSDDTDLTVVSSGDFWTIYRNTVNNEYSLCMFGNVPSSRPTAWNSYLKSIKHIEIEEATLTGSFEAYFRGTVFTVLESVRIEQCNLSGVTSFDMAFYNSGIEKVIIRDNDYPTAPSLLATTYMFSLCRNLSELDLSGLDTSAVTNIYGMFQNCISLEELDLSNFDTSSVTNMYSTFSGCRSLEKLDVSNFDTSSVTTMWAMFFECSSLEELDLSNFDTSSVTTMSYMFQLCPALKSLYLDNFTDAAIMTGMFGGTTSLTYLFVSHNLSTFNNLENTSWYDEKNWVQFSNLSQLQTYHRQQSEPTGYRKGAFLSLTMDAMGGQFEDAEEQKVQNKVSGEYWDEIVPVKEGHYFDGWYLNQDCTNKFDFSLPADASITIYAKWIENYTVIIPASISLNETSELKVEGINRGDKNLSVGLNRTAMSVSESNKLTLANTADTTVQCLAPLSWDGSETNPEKAILTLAPGSEITEGDAVMAIEAPENIQAGKYTGNLVFSIKYE
>NZ_FFHB01000003.1|WP_003725196.1|257923_258397_+|hypothetical-protein
MKKKRVVIISLLLLLVSVIGISSYFLFKDKINLLDVDHSAVDWNGKKQKDTSGEENTIAIPGFEKVTLYANETTQAVNFHNPEINDCYFKISLIHPDGSVLWISDLIEPGKGMYSIELEKTLAVGEYENAVLKYECFSLNDQSPLNGSEINLKLVVV
>NZ_FFHB01000003.1|WP_003733326.1|258416_258902_+|hypothetical-protein
MNKLVLSTLSVAAMGMVFFSGGTAYAADKEGNTVVEYSVEGDYTLVVPEKVNLSNDNATEMSVKTINRNLEPGKEVEVTLSSGLSADGEIELQRVGATSDVITSSFKSNNSVVPMANPVIGSFSGYAMEETEVSKIQIGNPQGDKKAGAYQTTLTFTAAFK
>NZ_FFHB01000003.1|WP_003740435.1|258929_259235_+|LPXTG-cell-wall-anchor-domain-containing-protein
MKRKLVLAMVLISFCGMFLLSPERVQASQTVVEVFISEDDLDVSEENIQEIPKKELAASSDKDNKQPILPKAGDTVTNYTLLGLVLVLIWLIMQRKRKKKE
>NZ_FFHB01000003.1|WP_003730795.1|259308_259575_+|hypothetical-protein
MARIEYEEKIQKSLLVLYFRGSTIQSICREYGIPRYEFYKWMKLHDADKLETKEVKTFLQIRELKQQKNKLEEEILFLNEAINLLESP
>NZ_FFHB01000003.1|WP_003725774.1|259898_260999_-|quinolinate-synthase-NadA
MNLLETVEQDTMPTHYKQMTQAEMIARVTEIKAQLGENLFIPCHHYQKDEVVPFADAIGDSLQLAQIAAQNKKAKHIVFCGVHFMAETADMLTTSEQIVTLPDMRAGCSMADMADIHQLTNAWPKLQTLFGDTILPVTYINSTAAIKSFVGEHGGTTVTSSNATKIVSWALEQKERIFFLPDQHLGRNTAFELGIPLEHMAIWNPIKNELEYEGNLDDCKVILWKGYCSVHQHFTVKNIENIRKNNPKMRIIVHPECTHEVVSLADDSGSTKKIVTEINNAAPGTEWAVGTEANLVGRIIQENPDKKIVSLNPFMCPCMTMNRIDLPHLLWTLEAIQNGEQRNQIKVDKQTTKFALKALERMLQLS
>NZ_FFHB01000003.1|WP_003730797.1|260995_261841_-|carboxylating-nicotinate-nucleotide-diphosphorylase
MNSILMNQAIQAFLLEDIGQHDISAETVFPRDTMGEGVFLAKETGILCGISIPPKVYELLGGNIQFEAYKKDGDWIQKGDIIAAVTAPVRTLLSGERVILNLMQRMSGIASQTNFAVKQLDDSAIRICDTRKTAPGLRAFDKYAVQTGGGFNHRNGLYDGVMLKDNHIAFSGGITSAVSTVREKLGHMVKIEVETETAEQVKEAVQAGADIIMFDNRTPEEIKQLVKLVPPHITTEISGNVTLENIHRYKGSGANYLSLGSLTHSVRAFDISFNSKGGIKA
>NZ_FFHB01000003.1|WP_003730798.1|261837_263292_-|L-aspartate-oxidase
MTKERVIIIGSGIAGCTAAFRLMHDYDVTIITKGLKEESNSMLAQGGVAAAVSKNDTPKKHFSDTFQAGCFHNKVLAVNQLVTNGPIVIQKLIAEGMTFDEQNGELSLGLEGAHQLPRILHTGGDQTGKFLTTFLQEKLTNIHWQEQKMAIEIIKQNDSAIGVHCLDKENRLHTYYGEHIILASGGLGQLFPVTTNAATISGDGLALAYRAGAKLTDMEFIQFHPTLLFLNGRCHGLISEAVRGEGAKLIRADGSAVMTDVHPRADLAPRDIVAATLFAEIQDGNEVFLDITPIPNFEERFPGITANLDAYHVPFRETKRIPVHPGAHFLMGGIRTDLQGKTNIPGLYAIGEVANAGVHGANRLASNSLLETLVFGEKVAEYILTQKTNLIDHPEIPLSNQTQTPHLPDKQLLQEKIWETLGITRKPEKITEFLHWLTDFDYANHTRETAEISHMLITAKLIAESALKRTESLGAHRILKGVIK
>NZ_FFHB01000003.1|WP_003730799.1|263423_264530_+|cysteine-desulfurase
MIYFDHAATTKMSEASLQVFMDASREFFANSESLHDAGTKSAALLEKCRESFSELLQVPNRGILFTSGGTESNQIAIQTLIHTTDKKEVLVSPLEHASVWQQLMALEQAGKCRINVLPVDSFGQVNPATLEKMISAETGLIIIQHVNSEIGTIQPIAELAHIAKKAGVFFHTDIVQSFGKIDLDLSDATSFSISSHKIYGPKGAGILFMKPDSPLQAVLPDVHHEFGFRPGTVNVPAIAAFTTAAYDIIENREQEAIRAMKLKAAICDTLEARVEVEGGPNTSPYILGLTLPNMQGQEALLALNEADIQISTTSACSLRDLAPSRTLIATGKTTEEANRFIRLSFGRENELNDSIIFKEEIDKLLRKR
>NZ_FFHB01000003.1|WP_003727955.1|264534_265056_+|transcription-repressor-NadR
MKKILGDTRRQMILKWLKEAEAPISGNQLAQKTNVSRQVIVQDISLLKAGNEPIMATPQGYIYAKETSYTGERRVIAVKHTKEQAAEELNILVDHGVSIIDVIVDHPIYGEITASLHLKSRFDVEKFVRKLQTTGATMLSGLTDGTHLHTIEADTKEQLEQAIKALDKAGFLI

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

6. NZ_FFHB01000005

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

2527 : 10813

Prochlorococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003729814.1\|2527_3820_+	adenylosuccinate lyase	A0A1B3B081	Gordonia_phage	2.5e-17	33.0
WP_003731571.1\|3900_4614_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A0E3F9V5	Synechococcus_phage	3.9e-41	38.3
WP_003722248.1\|4625_4871_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA
WP_003726212.1\|4874_5558_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA
WP_003731570.1\|5550_7770_+	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	6.5e-159	40.8
WP_003722245.1\|7754_9182_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	1.1e-53	34.6
WP_003726210.1\|9200_10250_+	phosphoribosylformylglycinamidine cyclo-ligase	Q58MH8	Prochlorococcus_phage	3.2e-63	44.4
WP_003731569.1\|10246_10813_+	phosphoribosylglycinamide formyltransferase	E3SNR5	Prochlorococcus_phage	2.8e-26	38.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage