CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Prophage number	Anti-CRISPR protein number
NZ_FRQN01000074	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	NA	0	0
NZ_FRQN01000085	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	NA	0	0
NZ_FRQN01000082	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	NA	0	0
NZ_FRQN01000040	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	NA	0	0
NZ_FRQN01000080	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	NA	0	0
NZ_FRQN01000018	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	NA	0	0
NZ_FRQN01000090	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	NA	0	0
NZ_FRQN01000028	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	1 crisprs	csa3	0	0
NZ_FRQN01000099	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	NA	0	0
NZ_FRQN01000045	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	NA	0	0
NZ_FRQN01000098	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	NA	0	0
NZ_FRQN01000086	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	NA	0	0
NZ_FRQN01000053	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	NA	0	0
NZ_FRQN01000003	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	NA	0	0
NZ_FRQN01000081	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	NA	0	0
NZ_FRQN01000052	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	Cas9_archaeal	2	2
NZ_FRQN01000056	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	NA	0	0
NZ_FRQN01000054	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	DEDDh	0	0
NZ_FRQN01000072	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	NA	0	0
NZ_FRQN01000071	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	NA	0	0
NZ_FRQN01000092	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	NA	0	0
NZ_FRQN01000015	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	1 crisprs	csa3	0	0
NZ_FRQN01000005	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	DEDDh	1	0
NZ_FRQN01000035	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	NA	1	1
NZ_FRQN01000044	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	NA	0	0
NZ_FRQN01000039	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	NA	0	0
NZ_FRQN01000057	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	NA	0	0
NZ_FRQN01000079	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	NA	0	0
NZ_FRQN01000036	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	NA	1	0
NZ_FRQN01000075	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	NA	0	0
NZ_FRQN01000004	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	NA	0	0
NZ_FRQN01000022	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	NA	0	0
NZ_FRQN01000073	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	NA	1	0
NZ_FRQN01000084	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	NA	0	0
NZ_FRQN01000091	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	NA	0	0
NZ_FRQN01000058	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	NA	0	0
NZ_FRQN01000019	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	NA	0	0
NZ_FRQN01000046	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	NA	0	0
NZ_FRQN01000030	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	NA	0	0
NZ_FRQN01000066	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	DEDDh	0	0
NZ_FRQN01000067	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	NA	0	0
NZ_FRQN01000034	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	csa3	1	0
NZ_FRQN01000068	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	NA	0	0
NZ_FRQN01000009	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	NA	0	0
NZ_FRQN01000100	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	NA	0	0
NZ_FRQN01000088	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	NA	0	0
NZ_FRQN01000032	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	NA	1	0
NZ_FRQN01000094	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	NA	0	0
NZ_FRQN01000033	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	NA	1	0
NZ_FRQN01000048	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	NA	0	0
NZ_FRQN01000025	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	DEDDh	0	0
NZ_FRQN01000070	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	cas3	0	0
NZ_FRQN01000093	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	NA	0	0
NZ_FRQN01000006	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	NA	0	0
NZ_FRQN01000014	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	cas3	0	0
NZ_FRQN01000078	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	NA	0	0
NZ_FRQN01000051	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	NA	0	0
NZ_FRQN01000102	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	NA	0	0
NZ_FRQN01000041	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	NA	0	0
NZ_FRQN01000050	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	NA	0	0
NZ_FRQN01000097	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	NA	0	0
NZ_FRQN01000069	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	NA	0	0
NZ_FRQN01000055	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	DEDDh,csa3	3	0
NZ_FRQN01000043	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	NA	0	0
NZ_FRQN01000001	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	NA	0	0
NZ_FRQN01000077	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	NA	0	0
NZ_FRQN01000012	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	DinG	0	0
NZ_FRQN01000062	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	NA	0	0
NZ_FRQN01000096	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	NA	0	0
NZ_FRQN01000064	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	NA	0	0
NZ_FRQN01000061	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	NA	0	0
NZ_FRQN01000023	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	NA	0	0
NZ_FRQN01000010	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	RT	1	0
NZ_FRQN01000083	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	NA	1	0
NZ_FRQN01000063	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	NA	0	0
NZ_FRQN01000060	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	NA	0	0
NZ_FRQN01000027	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	NA	0	0
NZ_FRQN01000021	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	DEDDh,csa3	1	0
NZ_FRQN01000011	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	NA	0	0
NZ_FRQN01000076	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	NA	0	0
NZ_FRQN01000024	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	1 crisprs	DEDDh	0	0
NZ_FRQN01000002	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	NA	0	0
NZ_FRQN01000037	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	DinG	0	0
NZ_FRQN01000038	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	NA	0	0
NZ_FRQN01000031	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	NA	0	0
NZ_FRQN01000016	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	cas3	0	0
NZ_FRQN01000089	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	NA	0	0
NZ_FRQN01000042	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	NA	0	0
NZ_FRQN01000007	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	NA	0	0
NZ_FRQN01000047	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	NA	0	0
NZ_FRQN01000026	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	NA	0	0
NZ_FRQN01000101	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	NA	0	0
NZ_FRQN01000087	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	NA	0	0
NZ_FRQN01000029	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	NA	0	0
NZ_FRQN01000095	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	NA	0	0
NZ_FRQN01000013	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	NA	0	0
NZ_FRQN01000049	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	NA	0	0
NZ_FRQN01000059	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	NA	0	0
NZ_FRQN01000065	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	NA	0	0
NZ_FRQN01000008	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	WYL	0	0
NZ_FRQN01000020	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	NA	0	0
NZ_FRQN01000017	Pseudomonas aeruginosa isolate 339, whole genome shotgun sequence	0 crisprs	NA	0	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

4451 : 59258

Pseudomonas_phage(81.82%)

lysis,protease,integrase,portal,terminase,holin

attL 10452:10469|attR 63778:63795

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_021265138.1\|4451_6560_-	molybdopterin oxidoreductase family protein	A0A077SK27	Escherichia_phage	3.6e-26	23.8
WP_023100877.1\|6858_9846_+	autotransporter domain-containing protein	A0A1B0T6A2	Bacillus_phage	6.8e-10	25.2
WP_009313597.1\|10239_10671_-	hypothetical protein	NA	NA	NA	NA
10452:10469	attL	NA	NA	NA	NA
WP_176461989.1\|11445_11961_+	DUF2335 domain-containing protein	A0A1B0YZW3	Pseudomonas_phage	4.8e-73	99.3
WP_073665595.1\|12014_12287_-	hypothetical protein	A0A0U4JEI3	Pseudomonas_phage	1.7e-45	96.7
WP_073665551.1\|12315_12555_-	hypothetical protein	A0A1B0YZV9	Pseudomonas_phage	1.6e-34	93.7
WP_073665552.1\|12551_12854_-	hypothetical protein	A0A0S2SY61	Pseudomonas_phage	8.5e-46	91.0
WP_178383523.1\|13409_13685_-	hypothetical protein	A0A0A0YR51	Pseudomonas_phage	6.1e-43	94.5
WP_010791959.1\|13690_14251_-	hypothetical protein	A0A0U4JIY3	Pseudomonas_phage	1.5e-99	99.5
WP_003159486.1\|14255_14447_-	hypothetical protein	A0A1B0Z2L3	Pseudomonas_phage	7.0e-30	100.0
WP_073665554.1\|14439_15027_-	hypothetical protein	A0A1W6JT86	Pseudomonas_phage	8.7e-103	94.9
WP_073665555.1\|15056_16715_-	hypothetical protein	A0A0A0YRR5	Pseudomonas_phage	0.0e+00	98.9
WP_073665556.1\|16711_17116_-	hypothetical protein	A0A0A0YR47	Pseudomonas_phage	6.9e-67	99.3
WP_073665557.1\|17672_18083_-	hypothetical protein	A0A1B0YZV0	Pseudomonas_phage	9.4e-64	95.6
WP_073665558.1\|18085_19783_-	hypothetical protein	A0A1B0YZV2	Pseudomonas_phage	0.0e+00	98.4
WP_019486491.1\|19782_20304_-	hypothetical protein	A0A1W6JT98	Pseudomonas_phage	3.3e-98	100.0
WP_073665559.1\|20343_22827_-	tape measure protein	A0A1B0YZV6	Pseudomonas_phage	0.0e+00	97.8
WP_033985253.1\|22929_23232_-	hypothetical protein	A0A0A0YWD4	Pseudomonas_phage	1.8e-48	100.0
WP_073665560.1\|23293_23935_-	prepilin-type N-terminal cleavage/methylation domain-containing protein	A0A1W6JT76	Pseudomonas_phage	2.2e-115	99.1
WP_073665561.1\|24016_24769_-	hypothetical protein	A0A1B0YZT8	Pseudomonas_phage	3.4e-136	98.4
WP_015980908.1\|24770_24965_-	hypothetical protein	A0A1W6JT79	Pseudomonas_phage	1.5e-27	98.4
WP_015980907.1\|24968_25439_-	hypothetical protein	A0A1W6JT75	Pseudomonas_phage	3.1e-87	99.4
WP_023110593.1\|25435_25765_-	hypothetical protein	A0A1B0YZU3	Pseudomonas_phage	3.1e-57	100.0
WP_023110592.1\|25761_26079_-	DUF2190 family protein	A0A1B0YZT7	Pseudomonas_phage	1.6e-50	100.0
WP_079867822.1\|26145_28239_-\|protease	Clp protease ClpP	A0A1B0YZU0	Pseudomonas_phage	0.0e+00	99.7
WP_031634083.1\|28198_29845_-\|portal	phage portal protein	A0A1B0YZU4	Pseudomonas_phage	0.0e+00	100.0
WP_003159476.1\|29844_30060_-	hypothetical protein	A0A1B0YZU1	Pseudomonas_phage	8.5e-32	100.0
WP_058168145.1\|30050_32015_-\|terminase	phage terminase large subunit family protein	A0A1B0Z2K0	Pseudomonas_phage	0.0e+00	99.8
WP_010791974.1\|31986_32532_-\|terminase	terminase small subunit	A0A1B0Z033	Pseudomonas_phage	1.5e-96	100.0
WP_073665562.1\|32651_33395_-	hypothetical protein	A0A1B0Z000	Pseudomonas_phage	2.4e-134	99.2
WP_073665563.1\|33391_33862_-\|lysis	lysis protein	A0A1B0Z001	Pseudomonas_phage	1.2e-73	94.9
WP_073665564.1\|33858_34101_-	hypothetical protein	A0A0H5AWC3	Pseudomonas_phage	2.4e-19	51.9
WP_073665565.1\|34097_34715_-	glycoside hydrolase family 19 protein	A0A1W6JTC9	Pseudomonas_phage	8.2e-104	91.2
WP_043494869.1\|34711_35044_-\|holin	phage holin, lambda family	A0A1B0YZZ1	Pseudomonas_phage	7.4e-43	80.0
WP_033971890.1\|35243_35426_+	type II toxin-antitoxin system HicA family toxin	A0A2H4JDU5	uncultured_Caudovirales_phage	4.2e-08	55.0
WP_058168140.1\|35472_35955_+	transcriptional regulator	A0A2H4JFV9	uncultured_Caudovirales_phage	4.9e-19	38.3
WP_073665566.1\|36065_36740_-	hypothetical protein	A0A1B0YZZ3	Pseudomonas_phage	4.4e-119	98.7
WP_073665567.1\|36777_37077_-	hypothetical protein	A0A1B0YZZ2	Pseudomonas_phage	1.1e-48	97.9
WP_031630620.1\|37073_37421_-	RusA family crossover junction endodeoxyribonuclease	A0A0H5AUD2	Pseudomonas_phage	1.7e-29	57.0
WP_031630618.1\|37417_37789_-	recombinase	A0A222YXV2	Escherichia_phage	7.3e-07	42.9
WP_073665568.1\|37785_37992_-	ninG protein	A0A1B0YZY8	Pseudomonas_phage	1.4e-31	94.1
WP_073665569.1\|37988_38672_-	hypothetical protein	A0A1B0YZY6	Pseudomonas_phage	6.1e-124	98.7
WP_073665570.1\|38668_39430_-	helix-turn-helix domain-containing protein	A0A1B0YZZ0	Pseudomonas_phage	1.7e-74	85.9
WP_073665571.1\|39494_40208_-	phage antirepressor KilAC domain-containing protein	A0A1B0YZY9	Pseudomonas_phage	6.9e-78	67.6
WP_073665572.1\|40685_41447_+	LexA family transcriptional regulator	A0A2H4J6J6	uncultured_Caudovirales_phage	3.6e-40	59.0
WP_176461990.1\|41783_42086_+	hypothetical protein	A0A0U4B0I0	Pseudomonas_phage	1.1e-37	77.0
WP_023657539.1\|42095_42302_+	hypothetical protein	A0A0U4ISE6	Pseudomonas_phage	2.5e-33	98.5
WP_034076569.1\|42545_43331_+	hypothetical protein	A0A1B0YZY3	Pseudomonas_phage	1.4e-137	95.0
WP_058168132.1\|43558_44428_+	ParB N-terminal domain-containing protein	A0A1B0YZX8	Pseudomonas_phage	5.0e-139	89.2
WP_058168130.1\|44619_45006_+	helix-turn-helix transcriptional regulator	A0A1B0YZX7	Pseudomonas_phage	2.2e-62	96.8
WP_079867823.1\|45016_45265_+	hypothetical protein	A0A0U3TGX2	Pseudomonas_phage	1.4e-30	85.0
WP_073665574.1\|45478_46153_+	hypothetical protein	A0A2P1MX92	Escherichia_phage	4.6e-07	31.8
WP_033982448.1\|46152_46455_+	hypothetical protein	A0A1B0YZY4	Pseudomonas_phage	4.1e-40	96.0
WP_031690983.1\|46519_46897_+	hypothetical protein	A0A2H4J2C6	uncultured_Caudovirales_phage	7.7e-20	45.4
WP_073665575.1\|46893_47430_+	DUF4406 domain-containing protein	A0A0U4IBL4	Pseudomonas_phage	1.4e-94	93.2
WP_033979127.1\|47488_47839_+	hypothetical protein	H2BD40	Pseudomonas_phage	4.3e-57	87.9
WP_073665576.1\|47921_48683_+	DNA cytosine methyltransferase	Q858D4	Salmonella_phage	5.1e-63	66.9
WP_073665577.1\|48694_48943_+	hypothetical protein	H2BD39	Pseudomonas_phage	1.9e-35	87.8
WP_176461987.1\|49112_50414_+	hypothetical protein	A0A0U4JEF1	Pseudomonas_phage	1.9e-81	82.9
WP_058139506.1\|50406_51186_+	hypothetical protein	A0A1B0YZW8	Pseudomonas_phage	6.8e-55	51.9
WP_058139504.1\|51178_51574_+	Lar family restriction alleviation protein	A0A0U4K5D6	Pseudomonas_phage	2.4e-64	100.0
WP_023875462.1\|51554_52049_+	DUF1643 domain-containing protein	B5WZV8	Pseudomonas_phage	2.4e-98	99.4
WP_033994597.1\|52120_52411_+	hypothetical protein	A0A0U4JVQ0	Pseudomonas_phage	1.8e-48	100.0
WP_049264095.1\|52805_53972_+\|integrase	site-specific integrase	A0A1B0Z061	Pseudomonas_phage	5.7e-223	99.7
WP_003092090.1\|54153_55071_+	ornithine carbamoyltransferase	M1HGA5	Paramecium_bursaria_Chlorella_virus	2.0e-21	27.6
WP_003092092.1\|55075_56158_+	ABC transporter ATP-binding protein	Q6GZ03	Mycoplasma_phage	8.4e-19	35.9
WP_021265141.1\|56264_57044_+	peroxide stress protein YaaA	NA	NA	NA	NA
WP_003110461.1\|57947_59258_+	GDP-mannose 6-dehydrogenase	A0A127AXI2	Bacillus_phage	8.3e-45	32.9
63778:63795	attR	NA	NA	NA	NA

DBSCAN-SWA_2

146920 : 155949

Bacillus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003092260.1\|146920_147961_-	recombinase RecA	A0A0S2MVG1	Bacillus_phage	1.5e-113	59.5
WP_003092262.1\|148094_148601_-	CinA family protein	B5TK85	Pseudomonas_phage	8.1e-57	76.0
WP_021265158.1\|148748_149756_+	TolB family protein	NA	NA	NA	NA
WP_003122151.1\|149881_152449_+	DNA mismatch repair protein MutS	E5RUN9	Heterocapsa_circularisquama_DNA_virus	1.4e-19	21.4
WP_003092272.1\|152515_152839_+	ferredoxin family protein	NA	NA	NA	NA
WP_003113871.1\|153265_154270_-	RNA polymerase sigma factor RpoS	F4YCU2	Synechococcus_phage	1.0e-34	34.8
WP_017148388.1\|154374_155268_-	peptidoglycan DD-metalloendopeptidase family protein	A0A076G6R1	Bacillus_phage	1.0e-06	34.3
WP_003098558.1\|155313_155949_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	1.0e-40	52.3

DBSCAN-SWA_3

389075 : 395261

Powai_lake_megavirus(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003092811.1\|389075_389507_-	nucleoside-diphosphate kinase	A0A167REB2	Powai_lake_megavirus	7.2e-22	41.7
WP_003092814.1\|389750_389951_-	Fe-S cluster assembly protein IscX	NA	NA	NA	NA
WP_003092818.1\|389976_390315_-	ISC system 2Fe-2S type ferredoxin	NA	NA	NA	NA
WP_003092822.1\|390321_392181_-	Fe-S protein assembly chaperone HscA	F2Y2E1	Organic_Lake_phycodnavirus	2.2e-107	40.3
WP_021265206.1\|392223_392745_-	co-chaperone HscB	NA	NA	NA	NA
WP_003100617.1\|392752_393076_-	iron-sulfur cluster assembly protein IscA	A0A2H4N7N5	Lake_Baikal_phage	9.8e-24	50.5
WP_003092829.1\|393103_393490_-	Fe-S cluster assembly scaffold IscU	A0A218MKD1	uncultured_virus	1.2e-52	79.8
WP_003092832.1\|393525_394740_-	IscS subfamily cysteine desulfurase	H7BUW1	unidentified_phage	2.6e-32	36.9
WP_003092836.1\|394769_395261_-	Fe-S cluster assembly transcriptional regulator IscR	M4M9K8	Vibrio_phage	2.2e-06	30.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_FRQN01000052

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 39235

Pseudomonas_phage(87.23%)

terminase,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_143178336.1\|0_296_-	DNA adenine methylase	Q5QF26	Pseudomonas_virus	4.6e-52	99.0
WP_139139669.1\|510_1113_+	hypothetical protein	NA	NA	NA	NA
WP_043088199.1\|1171_2917_-	AAA family ATPase	H2BD46	Pseudomonas_phage	2.4e-241	77.5
WP_034014061.1\|2920_3682_-	hypothetical protein	J7I0T4	Pseudomonas_phage	3.2e-105	67.4
WP_003116739.1\|3693_3894_-	hypothetical protein	H2BD48	Pseudomonas_phage	4.3e-30	100.0
WP_023103951.1\|3900_4806_-	recombination protein RecT	Q858E1	Salmonella_phage	1.4e-104	70.6
WP_033942989.1\|4818_5727_-	YqaJ viral recombinase family protein	Q858E0	Salmonella_phage	2.8e-124	71.3
WP_010793152.1\|5737_5947_-	hypothetical protein	NA	NA	NA	NA
WP_010793151.1\|5943_6165_-	hypothetical protein	A0A127KNM7	Pseudomonas_phage	2.8e-30	95.7
WP_019486665.1\|6148_6301_-	hypothetical protein	A0A127KNF7	Pseudomonas_phage	6.9e-12	100.0
WP_073665540.1\|6444_6816_-	carbon storage regulator CsrA	J7I430	Pseudomonas_phage	2.2e-51	80.5
WP_003126916.1\|6851_7064_-	hypothetical protein	L7TKR9	Pseudomonas_virus	2.0e-33	95.7
WP_073665541.1\|7292_8075_-	hypothetical protein	A0A0U3TGV3	Pseudomonas_phage	1.5e-78	89.6
WP_071536250.1\|8678_9167_-	hypothetical protein	NA	NA	NA	NA
WP_023094678.1\|9213_9879_-	helix-turn-helix transcriptional regulator	H2BDH4	Pseudomonas_virus	3.5e-44	41.5
WP_023094679.1\|10424_10916_-	hypothetical protein	A0A127KNL4	Pseudomonas_phage	7.5e-84	96.3
WP_003136886.1\|11019_11592_+	hypothetical protein	J7I4J9	Pseudomonas_phage	4.6e-101	98.9
WP_023094680.1\|11582_11834_-	hypothetical protein	NA	NA	NA	NA
WP_016263332.1\|11871_12054_+	hypothetical protein	A0A127KNC5	Pseudomonas_phage	4.5e-26	100.0
WP_031632346.1\|12046_12568_+	HNH endonuclease	A0A2K9VH78	Gordonia_phage	1.2e-10	51.5
WP_023094681.1\|12567_13416_+	DUF1376 domain-containing protein	H2BD69	Pseudomonas_phage	1.1e-74	97.8
WP_016263334.1\|13408_14824_+	replicative DNA helicase	H2BD70	Pseudomonas_phage	2.6e-262	99.4
WP_023094682.1\|14816_15260_+	RusA family crossover junction endodeoxyribonuclease	J7I4J7	Pseudomonas_phage	1.4e-76	98.0
WP_023094683.1\|15288_16158_+	hypothetical protein	J7HXH6	Pseudomonas_phage	4.8e-166	99.0
WP_004349441.1\|16272_16662_+	hypothetical protein	H2BD73	Pseudomonas_phage	9.9e-63	100.0
WP_016852757.1\|16654_16939_+\|holin	phage holin family protein	H2BD74	Pseudomonas_phage	5.9e-41	97.9
WP_003131202.1\|16947_17490_+\|terminase	terminase small subunit	H2BD75	Pseudomonas_phage	5.0e-97	98.3
WP_023094684.1\|17473_18727_+\|terminase	PBSX family phage terminase large subunit	J7I4J3	Pseudomonas_phage	2.9e-249	99.8
WP_016852759.1\|18726_18924_+	hypothetical protein	H2BD77	Pseudomonas_phage	5.2e-28	98.5
WP_003127999.1\|18926_20297_+	DUF1073 domain-containing protein	J7I414	Pseudomonas_phage	4.0e-268	99.3
WP_023086140.1\|20259_21183_+	hypothetical protein	H2BD79	Pseudomonas_phage	4.9e-169	99.0
WP_023094686.1\|21186_22464_+	hypothetical protein	A0A125RNM1	Pseudomonas_phage	2.4e-214	99.3
WP_023094687.1\|22467_22917_+	hypothetical protein	A0A125RNM2	Pseudomonas_phage	1.6e-77	99.3
WP_003127996.1\|22932_24027_+	hypothetical protein	A0A125RNM3	Pseudomonas_phage	7.0e-207	98.9
WP_003127995.1\|24037_24502_+	hypothetical protein	A0A125RNM4	Pseudomonas_phage	2.7e-51	77.0
WP_003131204.1\|24575_24977_+	hypothetical protein	J7HX89	Pseudomonas_phage	2.3e-70	97.0
WP_023094688.1\|24973_25312_+	hypothetical protein	A0A125RNM7	Pseudomonas_phage	8.0e-61	99.1
WP_023124723.1\|25313_25718_+	hypothetical protein	J7I0Q5	Pseudomonas_phage	2.1e-68	99.3
WP_003127992.1\|25714_26089_+	hypothetical protein	J7I407	Pseudomonas_phage	5.7e-68	100.0
WP_023094689.1\|26103_27099_+	Ig-like domain-containing protein	J7HX84	Pseudomonas_phage	1.8e-156	93.1
WP_023094690.1\|27095_27713_+	hypothetical protein	A0A125RNN1	Pseudomonas_phage	1.3e-112	98.5
WP_058168397.1\|27712_30214_+	tape measure protein	A0A127KNB7	Pseudomonas_phage	0.0e+00	98.4
WP_073665542.1\|30210_30678_+	hypothetical protein	H2BD92	Pseudomonas_phage	1.6e-91	98.1
WP_043084533.1\|30661_31153_+	DUF1833 family protein	J7I404	Pseudomonas_phage	4.1e-90	98.2
WP_024008250.1\|31157_31565_+	hypothetical protein	H2BD94	Pseudomonas_phage	2.6e-74	99.3
WP_043084535.1\|31536_34260_+	hypothetical protein	A0A127KNI3	Pseudomonas_phage	0.0e+00	84.5
WP_073665543.1\|34320_36378_+	structural protein	J7HXC9	Pseudomonas_phage	0.0e+00	95.8
WP_033953712.1\|36472_36907_+	lysozyme	A0A0S2SYD0	Pseudomonas_phage	1.3e-74	97.2
WP_033953711.1\|36903_37272_+	hypothetical protein	H2BDA0	Pseudomonas_phage	2.1e-30	61.5
WP_043084538.1\|37268_37529_+	hypothetical protein	B5WZU5	Pseudomonas_phage	7.6e-35	88.4
WP_043084540.1\|37673_38360_-	hypothetical protein	NA	NA	NA	NA
WP_052155777.1\|38359_38839_-	hypothetical protein	NA	NA	NA	NA
WP_043084541.1\|38971_39235_+	hypothetical protein	B5WZU6	Pseudomonas_phage	7.7e-43	93.1

DBSCAN-SWA_2

66145 : 77955

Pseudomonas_phage(62.5%)

integrase

attL 52570:52583|attR 73435:73448

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
52570:52583	attL	NA	NA	NA	NA
WP_021264889.1\|66145_69124_+	transporter substrate-binding domain-containing protein	A0A1V0SGX0	Hokovirus	2.0e-33	27.4
WP_021264888.1\|69214_69748_+	hypothetical protein	NA	NA	NA	NA
WP_043088193.1\|70210_71275_-\|integrase	tyrosine-type recombinase/integrase	A0A2H4JDJ8	uncultured_Caudovirales_phage	2.0e-113	58.4
WP_071534308.1\|71276_71510_-	DUF4224 domain-containing protein	A0A2H4JF29	uncultured_Caudovirales_phage	9.5e-13	49.3
WP_025991793.1\|71566_71953_-	hypothetical protein	A0A2K8HZQ6	Pseudomonas_phage	2.1e-65	100.0
WP_178383522.1\|72064_73735_-	hypothetical protein	A0A0U1UNM2	Pseudomonas_phage	6.6e-180	68.5
73435:73448	attR	NA	NA	NA	NA
WP_058182625.1\|74627_75266_-	hypothetical protein	A0A0U1SZL2	Pseudomonas_phage	1.2e-92	81.2
WP_139139668.1\|75351_75609_+	hypothetical protein	NA	NA	NA	NA
WP_073665545.1\|75610_76048_-	hypothetical protein	J7I440	Pseudomonas_phage	1.3e-71	95.7
WP_043088197.1\|76044_77955_-	DNA cytosine methyltransferase	A0A0U1T6D1	Pseudomonas_phage	7.8e-262	87.4

Anti-CRISPR protein detection

Acr_ID: NZ_FRQN01000052.1|WP_043084540.1|37673_38360_-|hypothetical-protein

Click the colored protein region to show detailed information

Acr_ID: NZ_FRQN01000052.1|WP_052155777.1|38359_38839_-|hypothetical-protein

Click the colored protein region to show detailed information

Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_FRQN01000052.1|WP_043084540.1|37673_38360_-|hypothetical-protein

37673_38360_-

228 aa aa

AcrIF24

hit_Aca_id	identity	query_coverage	hit_coverage
anti_CRISPR3656\|WP_043084540.1\|AcrIF24\|I-F\|Verified\|Pseudomonas-aeruginosa	1.0	1	1.0

HTH_1

Identity	Hit_domain_coverage
NA	NA

0-39235

NZ_FRQN01000052.1|WP_052155777.1|38359_38839_-|hypothetical-protein

38359_38839_-

159 aa aa

AcrIF23

hit_Aca_id	identity	query_coverage	hit_coverage
anti_CRISPR3655\|WP_052155777.1\|AcrIF23\|I-F\|Verified\|Pseudomonas-aeruginosa	1.0	1	1.0

HTH_1

Identity	Hit_domain_coverage
NA	NA

0-39235

3. NZ_FRQN01000036

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

99064 : 106328

Pseudomonas_phage(100.0%)

integrase

attL 98094:98120|attR 109855:109881

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
98094:98120	attL	NA	NA	NA	NA
WP_034014422.1\|99064_100048_-\|integrase	tyrosine-type recombinase/integrase	Q56VN7	Pseudomonas_phage	2.1e-93	52.3
WP_003123045.1\|100047_101340_-	hypothetical protein	Q56VN8	Pseudomonas_phage	4.8e-247	94.0
WP_073665521.1\|101598_102861_-	hypothetical protein	Q56VN9	Pseudomonas_phage	7.1e-118	57.2
WP_003133726.1\|102862_103213_-	DUF2523 domain-containing protein	Q56VP0	Pseudomonas_phage	1.6e-19	40.2
WP_033953308.1\|103222_104170_-	hypothetical protein	NA	NA	NA	NA
WP_003124953.1\|104486_104705_-	hypothetical protein	NA	NA	NA	NA
WP_003124954.1\|104718_104970_-	hypothetical protein	NA	NA	NA	NA
WP_003140508.1\|105090_105525_-	hypothetical protein	Q56VP5	Pseudomonas_phage	3.8e-63	100.0
WP_023131707.1\|106040_106328_-	DUF5447 family protein	Q56VP7	Pseudomonas_phage	3.1e-53	95.7
109855:109881	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

4. NZ_FRQN01000034

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

50363 : 89881

Pseudomonas_phage(100.0%)

integrase,transposase,protease,head

attL 55927:55943|attR 59514:59530

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003127781.1\|50363_50732_-	hypothetical protein	J9SGX4	Pseudomonas_phage	1.1e-63	100.0
WP_003117363.1\|50728_51277_-	hypothetical protein	J9RWB3	Pseudomonas_phage	2.1e-98	100.0
WP_015649391.1\|51276_51843_-	regulatory protein GemA	J9SVT5	Pseudomonas_phage	2.1e-101	99.5
WP_016852433.1\|51829_52297_-	hypothetical protein	J9STM8	Pseudomonas_phage	8.5e-77	100.0
WP_016852434.1\|52296_52488_-	hypothetical protein	J9RW45	Pseudomonas_phage	5.0e-28	100.0
WP_016852435.1\|52489_53179_-	DUF2786 domain-containing protein	Q5ZR11	Pseudomonas_phage	4.2e-125	98.7
WP_016852436.1\|53180_53804_-	DUF3164 family protein	Q5ZR10	Pseudomonas_phage	1.3e-109	99.5
WP_016852437.1\|53796_53997_-	hypothetical protein	J9SVU3	Pseudomonas_phage	6.7e-31	97.0
WP_016852438.1\|53989_54523_-	hypothetical protein	J9STN6	Pseudomonas_phage	3.3e-93	98.9
WP_016852439.1\|54512_55193_-	hypothetical protein	J9SNC1	Pseudomonas_phage	2.4e-128	98.7
WP_014603990.1\|55192_55477_-	hypothetical protein	J9SGZ7	Pseudomonas_phage	3.4e-44	100.0
WP_016852440.1\|55473_55815_-	hypothetical protein	J9RWC3	Pseudomonas_phage	3.5e-56	99.1
WP_016852441.1\|55816_56983_-	AAA family ATPase	J9SVV1	Pseudomonas_phage	1.0e-216	100.0
55927:55943	attL	NA	NA	NA	NA
WP_016852442.1\|56982_58767_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	J9SGQ3	Pseudomonas_phage	0.0e+00	98.5
WP_023101705.1\|58770_59745_-	hypothetical protein	J9RW58	Pseudomonas_phage	8.9e-153	97.8
59514:59530	attR	NA	NA	NA	NA
WP_003142307.1\|59754_60069_-	hypothetical protein	J9SUN0	Pseudomonas_phage	2.9e-49	98.1
WP_003142306.1\|60065_60326_-	hypothetical protein	J9RWD0	Pseudomonas_phage	1.5e-38	95.3
WP_010791820.1\|60318_60807_-	hypothetical protein	J9SNL8	Pseudomonas_phage	2.8e-91	99.4
WP_015649394.1\|60930_61155_+	hypothetical protein	NA	NA	NA	NA
WP_003142304.1\|61439_61670_-	DNA-binding protein	J9RW65	Pseudomonas_phage	2.5e-37	100.0
WP_157783244.1\|61854_62115_+	hypothetical protein	J9SH16	Pseudomonas_phage	1.8e-12	82.6
WP_003094225.1\|62825_63083_+	membrane protein	A0A0S4L5C0	Pseudomonas_phage	7.2e-38	100.0
WP_003094227.1\|63085_63244_+	hypothetical protein	J9SNF4	Pseudomonas_phage	3.4e-22	100.0
WP_016852445.1\|63240_63870_+	transglycosylase SLT domain-containing protein	J9SH25	Pseudomonas_phage	1.9e-119	98.6
WP_015649412.1\|64071_64695_+	hypothetical protein	J9SVX5	Pseudomonas_phage	3.6e-99	90.3
WP_003117315.1\|64694_65015_+	DUF2730 family protein	J9STR5	Pseudomonas_phage	5.1e-49	100.0
WP_003121465.1\|65011_65314_+	hypothetical protein	J9SNG3	Pseudomonas_phage	4.1e-48	99.0
WP_003121466.1\|65316_65865_+	DUF3486 family protein	J9SH37	Pseudomonas_phage	6.4e-76	98.9
WP_003138156.1\|65866_67540_+	hypothetical protein	J9RWF2	Pseudomonas_phage	0.0e+00	99.5
WP_023093201.1\|67533_69108_+	DUF935 domain-containing protein	J9SVY0	Pseudomonas_phage	7.6e-287	96.2
WP_016852447.1\|69097_70336_+	hypothetical protein	J9STS2	Pseudomonas_phage	5.8e-242	99.5
WP_016852448.1\|70337_70913_+	phage virion morphogenesis protein	J9SNH3	Pseudomonas_phage	2.9e-103	99.0
WP_003138161.1\|71123_72233_+\|protease	phage protease	J9SH47	Pseudomonas_phage	2.9e-200	99.2
WP_003121593.1\|72238_72643_+	hypothetical protein	J9RWG0	Pseudomonas_phage	1.8e-67	100.0
WP_003127513.1\|72657_73554_+\|head	Mu-like prophage major head subunit gpT family protein	J9SVY7	Pseudomonas_phage	1.3e-171	100.0
WP_015649419.1\|73566_74001_+	hypothetical protein	J9STT1	Pseudomonas_phage	1.1e-49	99.0
WP_003121492.1\|74003_74519_+	DUF1320 domain-containing protein	J9SNI4	Pseudomonas_phage	3.5e-92	100.0
WP_003138162.1\|74515_74968_+	hypothetical protein	J9SH57	Pseudomonas_phage	2.1e-80	99.3
WP_003127509.1\|74964_75168_+	hypothetical protein	J9RWG5	Pseudomonas_phage	1.7e-29	100.0
WP_016852449.1\|75174_75915_+	hypothetical protein	J9SVZ4	Pseudomonas_phage	1.8e-134	98.8
WP_016852450.1\|75917_76400_+	hypothetical protein	J9STT8	Pseudomonas_phage	2.8e-83	99.4
WP_049967619.1\|76354_76537_-	hypothetical protein	J9SNJ6	Pseudomonas_phage	1.2e-26	100.0
WP_031635540.1\|76653_80295_+	tape measure protein	J9SH65	Pseudomonas_phage	0.0e+00	92.4
WP_016852452.1\|80294_81251_+	hypothetical protein	J9RWP3	Pseudomonas_phage	3.1e-182	95.0
WP_016852453.1\|81253_82177_+	hypothetical protein	A0A0S4L5N6	Pseudomonas_phage	3.3e-181	98.7
WP_016852454.1\|82179_83886_+	hypothetical protein	J9STL4	Pseudomonas_phage	0.0e+00	97.5
WP_016852455.1\|83872_84691_+	phage BR0599 family protein	J9SN93	Pseudomonas_phage	3.8e-165	99.3
WP_003094285.1\|84700_84931_+	hypothetical protein	Q5ZQW1	Pseudomonas_phage	1.2e-36	100.0
WP_003094286.1\|85144_87355_+	hypothetical protein	Q5ZQV9	Pseudomonas_phage	0.0e+00	97.8
WP_003094288.1\|87351_88500_+	hypothetical protein	J9SP76	Pseudomonas_phage	9.0e-213	92.9
WP_003094290.1\|88496_88787_+	hypothetical protein	A0A0A7DJU8	Pseudomonas_phage	2.6e-44	95.7
WP_071534095.1\|88925_89117_+	Com family DNA-binding transcriptional regulator	Q5ZQW8	Pseudomonas_phage	3.0e-20	74.6
WP_003094291.1\|89086_89881_+	DNA adenine methylase	Q5ZQW7	Pseudomonas_phage	1.8e-143	90.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

5. NZ_FRQN01000024

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_FRQN01000024_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_FRQN01000024_1

213920-214012

Orphan

Consensus_repeat	Method
GCCGACAACGGCAGCGAGCAGACC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_FRQN01000024_1

>merge|NZ_FRQN01000024|1|213920-214012|CRISPRCasFinder
GCCGACAACGGCAGCGAGCAGACCATCGACCGCCTGCACAAGGACATGACCAAGGCCGAAGCCCGTCTGGCCGACAACGGCAGCGAACAGACC

>NZ_FRQN01000024|1|1|213920-214012|CRISPRCasFinder
GCCGACAACGGCAGCGAGCAGACC	ATCGACCGCCTGCACAAGGACATGACCAAGGCCGAAGCCCGTCTG
GCCGACAACGGCAGCGAACAGACC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_FRQN01000024.1\|WP_003121125.1\|205154_206018_-\|oxaloacetate-decarboxylase	unknown	unknown	gnl\|CDD\|225311
NZ_FRQN01000024.1\|WP_023101624.1\|221064_222165_-\|ferredoxin-reductase	unknown	unknown	gnl\|CDD\|99812
NZ_FRQN01000024.1\|WP_003095524.1\|222323_222953_+\|TetR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|236881
NZ_FRQN01000024.1\|WP_003123548.1\|216369_217059_+\|heavy-metal-response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|130454
NZ_FRQN01000024.1\|WP_003095513.1\|215608_216232_-\|hypothetical-protein	unknown	unknown	unknown
NZ_FRQN01000024.1\|WP_003095479.1\|207663_208080_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|183165
NZ_FRQN01000024.1\|WP_023101622.1\|218419_219736_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|341030
NZ_FRQN01000024.1\|WP_023101619.1\|208234_208774_+\|MOSC-domain-containing-protein	unknown	unknown	gnl\|CDD\|225167
NZ_FRQN01000024.1\|WP_058173426.1\|214176_214944_-\|molybdopterin-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|239026
NZ_FRQN01000024.1\|WP_003095488.1\|208862_209207_+\|osmotically-inducible-lipoprotein-OsmE	unknown	unknown	gnl\|CDD\|183058
NZ_FRQN01000024.1\|WP_003135413.1\|217037_218429_+\|heavy-metal-sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|273593
NZ_FRQN01000024.1\|WP_004365459.1\|212983_213517_+\|bacterioferritin	unknown	unknown	gnl\|CDD\|225104
NZ_FRQN01000024.1\|WP_023101620.1\|210618_212688_-\|AsmA-family-protein	unknown	unknown	gnl\|CDD\|225529
NZ_FRQN01000024.1\|WP_003110939.1\|204401_205148_+\|hypothetical-protein	unknown	unknown	unknown
NZ_FRQN01000024.1\|WP_023101625.1\|223182_223686_+\|urease-accessory-protein-UreE	unknown	unknown	gnl\|CDD\|237322
NZ_FRQN01000024.1\|WP_023101621.1\|214940_215555_-\|cytochrome-b/b6-domain-containing-protein	unknown	unknown	gnl\|CDD\|226602
NZ_FRQN01000024.1\|WP_073665422.1\|219955_221068_-\|fatty-acid-desaturase	unknown	unknown	gnl\|CDD\|225779
NZ_FRQN01000024.1\|WP_003095496.1\|209804_210617_+\|c-di-GMP-binding-multidrug-transporter-transcriptional-regulator-BrlR	unknown	unknown	gnl\|CDD\|226231
NZ_FRQN01000024.1\|WP_003095476.1\|206223_207489_+\|Hsp70-family-protein	unknown	unknown	gnl\|CDD\|212673
NZ_FRQN01000024.1\|WP_003095492.1\|209250_209658_-\|Rho-termination-factor-N-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|377850

Protein	Function_ID	Function_description	E-value
NZ_FRQN01000024.1\|WP_003121125.1\|205154_206018_-\|oxaloacetate-decarboxylase	gnl\|CDD\|225311	COG2513, PrpB, PEP phosphonomutase and related enzymes [Carbohydrate transport and metabolism].	1.3777e-87
NZ_FRQN01000024.1\|WP_023101624.1\|221064_222165_-\|ferredoxin-reductase	gnl\|CDD\|99812	cd06216, FNR_iron_sulfur_binding_2, Iron-sulfur binding ferredoxin reductase (FNR) proteins combine the FAD and NAD(P) binding regions of FNR with an iron-sulfur binding cluster domain. Ferredoxin-NADP+ (oxido)reductase is an FAD-containing enzyme that catalyzes the reversible electron transfer between NADP(H) and electron carrier proteins such as ferredoxin and flavodoxin. Isoforms of these flavoproteins (i.e. having a non-covalently bound FAD as a prosthetic group) are present in chloroplasts, mitochondria, and bacteria in which they participate in a wide variety of redox metabolic pathways. The C-terminal domain contains most of the NADP(H) binding residues and the N-terminal domain interacts non-covalently with the isoalloxazine rings of the flavin molecule which lies largely in a large gap betweed the two domains. Ferredoxin-NADP+ reductase first accepts one electron from reduced ferredoxin to form a flavin semiquinone intermediate. The enzyme then accepts a second electron to form FADH2 which then transfers two electrons and a proton to NADP+ to form NADPH.	2.08128e-87
NZ_FRQN01000024.1\|WP_003123548.1\|216369_217059_+\|heavy-metal-response-regulator-transcription-factor	gnl\|CDD\|130454	TIGR01387, Transcriptional_regulatory_protein_PcoR, heavy metal response regulator. Members of this family contain a response regulator receiver domain (pfam00072) and an associated transcriptional regulatory region (pfam00486). This group is separated phylogenetically from related proteins with similar architecture and contains a number of proteins associated with heavy metal resistance efflux systems for copper, silver, cadmium, and/or zinc. Most members encoded by genes adjacent to genes for encoding a member of the heavy metal sensor histidine kinase family (TIGRFAMs:TIGR01386), its partner in the two-component response regulator system. [Regulatory functions, DNA interactions].	2.46904e-112
NZ_FRQN01000024.1\|WP_003095524.1\|222323_222953_+\|TetR-family-transcriptional-regulator	gnl\|CDD\|236881	PRK11202, PRK11202, HTH-type transcriptional repressor FabR.	7.9449e-41
NZ_FRQN01000024.1\|WP_003095479.1\|207663_208080_-\|hypothetical-protein	gnl\|CDD\|183165	PRK11505, PRK11505, phosphate starvation-inducible protein PsiF.	1.76735e-18
NZ_FRQN01000024.1\|WP_023101622.1\|218419_219736_-\|MFS-transporter	gnl\|CDD\|341030	cd17477, MFS_YcaD_like, YcaD and similar transporters of the Major Facilitator Superfamily. This family is composed of Escherichia coli MFS-type transporter YcaD, Bacillus subtilis MFS-type transporter YfkF, and similar proteins. They are uncharacterized transporters belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.42572e-107
NZ_FRQN01000024.1\|WP_023101619.1\|208234_208774_+\|MOSC-domain-containing-protein	gnl\|CDD\|225167	COG2258, COG2258, Uncharacterized protein conserved in bacteria [Function unknown].	4.31602e-29
NZ_FRQN01000024.1\|WP_058173426.1\|214176_214944_-\|molybdopterin-dependent-oxidoreductase	gnl\|CDD\|239026	cd02108, bact_SO_family_Moco, bacterial subgroup of the sulfite oxidase (SO) family of molybdopterin binding domains. This domain is found in a variety of oxidoreductases. Common features of all known members of this family, like sulfite oxidase and nitrite reductase, are that they contain one single pterin cofactor and part of the coordination of the metal (Mo) is a cysteine ligand of the protein and that they catalyze the transfer of an oxygen to or from a lone pair of electrons on the substrate. The specific function of this subgroup is unknown.	8.34773e-95
NZ_FRQN01000024.1\|WP_003095488.1\|208862_209207_+\|osmotically-inducible-lipoprotein-OsmE	gnl\|CDD\|183058	PRK11251, PRK11251, osmotically-inducible lipoprotein OsmE.	1.90142e-51
NZ_FRQN01000024.1\|WP_003135413.1\|217037_218429_+\|heavy-metal-sensor-histidine-kinase	gnl\|CDD\|273593	TIGR01386, Probable_sensor_protein_PcoS, heavy metal sensor kinase. Members of this family contain a sensor histidine kinase domain (pfam00512) and a domain found in bacterial signal proteins (pfam00672). This group is separated phylogenetically from related proteins with similar architecture and contains a number of proteins associated with heavy metal resistance efflux systems for copper, silver, cadmium, and/or zinc.	0
NZ_FRQN01000024.1\|WP_004365459.1\|212983_213517_+\|bacterioferritin	gnl\|CDD\|225104	COG2193, Bfr, Bacterioferritin (cytochrome b1) [Inorganic ion transport and metabolism].	3.63036e-51
NZ_FRQN01000024.1\|WP_023101620.1\|210618_212688_-\|AsmA-family-protein	gnl\|CDD\|225529	COG2982, AsmA, Uncharacterized protein involved in outer membrane biogenesis [Cell envelope biogenesis, outer membrane].	0
NZ_FRQN01000024.1\|WP_023101625.1\|223182_223686_+\|urease-accessory-protein-UreE	gnl\|CDD\|237322	PRK13261, ureE, urease accessory protein UreE; Provisional.	4.95551e-60
NZ_FRQN01000024.1\|WP_023101621.1\|214940_215555_-\|cytochrome-b/b6-domain-containing-protein	gnl\|CDD\|226602	COG4117, COG4117, Thiosulfate reductase cytochrome B subunit (membrane anchoring protein) [Energy production and conversion].	5.44094e-70
NZ_FRQN01000024.1\|WP_073665422.1\|219955_221068_-\|fatty-acid-desaturase	gnl\|CDD\|225779	COG3239, DesA, Fatty acid desaturase [Lipid metabolism].	7.12632e-66
NZ_FRQN01000024.1\|WP_003095496.1\|209804_210617_+\|c-di-GMP-binding-multidrug-transporter-transcriptional-regulator-BrlR	gnl\|CDD\|226231	COG3708, COG3708, Uncharacterized protein conserved in bacteria [Function unknown].	1.65802e-48
NZ_FRQN01000024.1\|WP_003095476.1\|206223_207489_+\|Hsp70-family-protein	gnl\|CDD\|212673	cd10231, YegD_like, Escherichia coli YegD, a putative chaperone protein, and related proteins. This bacterial subfamily includes the uncharacterized Escherichia coli YegD. It belongs to the heat shock protein 70 (HSP70) family of chaperones that assist in protein folding and assembly and can direct incompetent "client" proteins towards degradation. Typically, HSP70s have a nucleotide-binding domain (NBD) and a substrate-binding domain (SBD). The nucleotide sits in a deep cleft formed between the two lobes of the NBD. The two subdomains of each lobe change conformation between ATP-bound, ADP-bound, and nucleotide-free states. ATP binding opens up the substrate-binding site; substrate-binding increases the rate of ATP hydrolysis. YegD lacks the SBD. HSP70 chaperone activity is regulated by various co-chaperones: J-domain proteins and nucleotide exchange factors (NEFs). Some family members are not chaperones but instead, function as NEFs for their Hsp70 partners, other family members function as both chaperones and NEFs.	0
NZ_FRQN01000024.1\|WP_003095492.1\|209250_209658_-\|Rho-termination-factor-N-terminal-domain-containing-protein	gnl\|CDD\|377850	pfam07498, Rho_N, Rho termination factor, N-terminal domain. The Rho termination factor disengages newly transcribed RNA from its DNA template at certain, specific transcripts. It it thought that two copies of Rho bind to RNA and that Rho functions as a hexamer of protomers. This domain is found to the N-terminus of the RNA binding domain (pfam07497).	0.000208897

>NZ_FRQN01000024.1|WP_004365459.1|212983_213517_+|bacterioferritin
MTTVQLTDVQTLRDRARKNIQEGAVTEGYSADRQTVLRLLNEALATELVCFLRYKRHYFMATGLKASIAAAEFLEHANQEMQHADQLAERIMQLGGEPDFNPRGLEERSHAEYVEGKTLKDMVTENLIAERIAIDSYREIITYLGNDDPTSRRIFEEILAQEEEHADDMADILDDLA
>NZ_FRQN01000024.1|WP_023101620.1|210618_212688_-|AsmA-family-protein
MTRGRKILTWSLASLVLLLAALVVFIATFDWNLIKPTLNEKVSAALNRPFAINGNLAVAWRREEGEEGWRAWIPWPRFSAEDITLGNPEWTAGKTKASEFASLERIEFRLAPLPLLWQTIRIPQIKLTQPRADLLRLADGRANWDFDLPASDSDEPSAWQLDIREIGFDKGSVSLDDQRLKTRLEVLVDPLGKPVPFGQLAGKALATGDAADAQDYVFGWKVKGTYKGQALAGSGKVGGMLALQDASKPFPLQAEVSAGSTRAAVVGTLTDPLNLGALDLRLKLSGTSMANLYPLTGITLPDTPAYSTDGHLLARLKEEGGALFRYENFNGKVGASDLHGSLTFVARQPRPKLSGKLTSEQLRFADLGPLIGADSNAEKQKRGQTSRQPGDKVLPVEEFRTERWRDMDADVEFTGKRIVHSDQLPISDLYTHLVLNDGLLRLEPLRFGVAGGKLESDIRLDGGKQPMQSRVKMSARGFKLKQLFPGFAPMQTSFGELNGDASLSGNGNSVAKILGGADGELKMLINDGAISKGLTEIAGLNVGNYLVTKLFGDDEVKINCAAADFGLQKGLMTSRLFVFDTENALVNVDGTVNFANEKLDLDVTPHSKGLRIFSLRSPLYVRGTFAKPDAGVHAGPLVARGAGMIALGVAVGPAASLLALVAPSKSDDNQCTALLQRMRQPAKAPAGKR
>NZ_FRQN01000024.1|WP_003095496.1|209804_210617_+|c-di-GMP-binding-multidrug-transporter-transcriptional-regulator-BrlR
MLTIGQLARIFEISTKTLRHYDAIGLFVPARTGSDNGYRYYQPEQIEQLSRILALRRLDVPLEAIDRLKRDGALDDPQRLRHFLQRHQHTLREEISARQRLLAELDRTLATLAHWRIRNMHARIVERPAFSVVGMEYFGSAPGDTIGQLWERFIPREHEIAGKHDPEVSYGICAQQPNGEFHYVAGFEVQEGWPVPEGMVRFQVPAQKYAVFTHKGTAPQIAESFQAIYSHLLAERGLEPKAGVDFEYYDQRFRGPLDPNSQVDLYIPIY
>NZ_FRQN01000024.1|WP_003095492.1|209250_209658_-|Rho-termination-factor-N-terminal-domain-containing-protein
MPRGDKSKYSDKQQRKAEHIEESYKAKGVSESEAEARAWATVNKQSGGGERKGGSGRAKSETAKRADRKDSAHRAAQARSGRPANRGSASRGKRQGSTSVSEMTREELMQLARKRDIRGRSTMRKAELIEALSRA
>NZ_FRQN01000024.1|WP_003095488.1|208862_209207_+|osmotically-inducible-lipoprotein-OsmE
MYKQSLAALFVMATLAGCASTKVQNPVNYITFRNEPLVKDVEKGMSQQEVLRIGGTPSGTQKRLMKPGSCNSYILNKDGQQQPFYVSFDGSGKVDGSGFLSCSELDRHERDARP
>NZ_FRQN01000024.1|WP_023101619.1|208234_208774_+|MOSC-domain-containing-protein
MQQVIAVSLCATHAFSKQVRPAIRLLKGLGVEGDAHHGVTVKHRSRVLQDPTQPNLRQVHLIHEELHDELRASGFAIGPGTMGENITTRGVDLLGLPTGTRLRLGESALVELTGLRNPCSQLDNYQPGLTAAVLGRDEQGNLIRKAGVMAIVLEDGEVRPGDAIDIQLPPLPHRALEKV
>NZ_FRQN01000024.1|WP_003095479.1|207663_208080_-|hypothetical-protein
MNILRIPMFVLAMAVSAHGFAATAQQEKMTACNAEATTKALKGDERKAFMSGCLKAGAPAGGKATAQQEKMKSCNADASAKSLKGDERKAFMSSCLKAGGSAKAATQQEKMKTCNADATAKALKGDERKAFMSTCLKK
>NZ_FRQN01000024.1|WP_003095476.1|206223_207489_+|Hsp70-family-protein
MNPSTAARALGIDFGTSNSTVGWWRPEVEPLIELEDGKITLPSVVFFNVEERRPVYGRQALGEYLEGYEGRLMRSLKSLLGSKLLKSETTVLGSALPFKDLLGLFIGQLKARGEAAAGQAFDAVVLGRPVFFVDDDPEADREAQDTLVQVANKLGFKEVSFQYEPIAAAFDYERGIQREELVLIVDIGGGTSDFSLVRLAPERRNLAERQDDILATGGVHIGGTDFDKQLSLEGVMPLFGYGSRMKSDAFMPTSYHLNLATWHTINAVYAQKSQLALKNMRYDIVDSTGIDRLFRLIEERAGHWLAMQVEDSKIRLTETERLHLSLERIEAGLGVELTRGLFENAVDGLLERVRNSVAQLLASAGVDPDRVDTVFFTGGSSGIPALRRSVSAMLPNARHVEGNLFGSIGSGLAIEAKKRYG
>NZ_FRQN01000024.1|WP_003121125.1|205154_206018_-|oxaloacetate-decarboxylase
MHRASHHELRAMFRALLDSSRCYHTASVFDPMSARIAADLGFECGILGGSVASLQVLAAPDFALITLSEFVEQATRIGRVARLPVIADADHGYGNALNVMRTVVELERAGIAALTIEDTLLPAQFGRKSTDLICVEEGVGKIRAALEARVDPALTIIARTNAELIDVDAVIQRTLAYQEAGADGICLVGVRDFAHLEAIAEHLHIPLMLVTYGNPQLRDDARLARLGVRVVVNGHAAYFAAIKATYDCLREERGAVASDLTASELSKKYTFPEEYQAWARDYMEVKE
>NZ_FRQN01000024.1|WP_003110939.1|204401_205148_+|hypothetical-protein
MKIDSASSSPSLAQRQLMTRTPDQDFQRDFQAAYARLAVAAEGSAEQAGALADTLGATQLEYSRVRGVSLEDQLRFAHVLNRACENDAQLDARGFLARLGADDLQALQRNMGLAEPIRVEALSEEGARNLLLPEGYSVDLDGDGITEVGAAKIRHFPPRDAPQAFLDQWLALTAGMDGAAYSNARDGLQWAFDIRAMAGQPLATDQLASYRTAVDDYLGMLAEHRHALVPGQYERDLPLYQALRQRLA
>NZ_FRQN01000024.1|WP_058173426.1|214176_214944_-|molybdopterin-dependent-oxidoreductase
MKGPEKKRAKIAIDPSSERQMVDLQRRLLLRGGLSLGALAMLSGCRLQDGDSVDKVLWAMSRWNDRVQAWLFSRTRLAPIFDPSQVVSPFPFNAFYPAYNVPEIDLPEYRLQVSGRVRDKRPWSLEQLRRLPQASQVTQLICIEGWSAIGQWSGVPLRTFLELVGADTSAKYVGFKCADRYYSSLDMPSALHPQTLLALEMSGQALPEENGYPLRLRIPTKLGFKNAKHVVEIFVSNSNPGGYWEDQGYNWFSGV
>NZ_FRQN01000024.1|WP_023101621.1|214940_215555_-|cytochrome-b/b6-domain-containing-protein
MNRALHAWPVRLCHWLNAYAMACLIGSGWGIYNASPLLDFRFPAWATLGGWLGGSIAWHLAAMWLLLGNGLCYLAYGLSSGHFRRDFLPLSAAGVWRDLRLALGLRLVHEPGRYNAVQRLLYWLVLALGALLVLSGLAIWKPVQLHGLTALFGGFQGARWVHFLAMAGVVGFVVVHLLLVLLVPRTLLPMIIGREWRRGRRSGG
>NZ_FRQN01000024.1|WP_003095513.1|215608_216232_-|hypothetical-protein
MLRLKASPALLFGLLLASAASFAAQPPAGMLQPLRGTIQQAADDHLQLKARNGQQLTVRLTDKTAIRAVSLAKPEDIQPDSFIGTAAVPQPDGTLKALEVHVFAPSLRGSGEGHRPWENADGSASTMTNGTVGNLVVSQGRRMTVKYGDGEKTVVVPDDVPIVSLEPGERSLLKPGAKVVLFPQKGADGSLTALAISVGKDGVTPPM
>NZ_FRQN01000024.1|WP_003123548.1|216369_217059_+|heavy-metal-response-regulator-transcription-factor
MRILVIEDDTKTGEYLKKGLGESGYAVDWSQHGADGLYLALENRYDLVVLDVMLPGLDGWQIMEVLRKKHDVPVLFLTARDQLQDRIRGLELGADDYLVKPFSFTELLLRIRTLLRRGVVREAEQVQLADLHLDVLRRKVSRQGQVIALTNKEFALLHLLMRREGEVLSRTLIASEVWDMNFDSDTNVVDVAIKRLRAKVDNPFPNKLIHTVRGIGYVCEERPCPPAAP
>NZ_FRQN01000024.1|WP_003135413.1|217037_218429_+|heavy-metal-sensor-histidine-kinase
MPARRSLTLYAALLFAAVAALVVSAVGFYLYRSVEEAMLRRSDVMVAGRVEHFRNLLRDNLTLAELKARPRLFENMLGNEQDILLLGQPGEAPIVAVNPRHERLPSLRVVAAGQALNPSVVHAALTHDGVPMRVLAAEVLVGGREPLQITAAHLLLGETRMLAQYRDRVIAAVLLAFLGTALLGWLVLRHGLRPLRTLAAKAAEIHPTSLDTRLDVAAAPAELQQVAQSFNAMLERLDDGYQRLQQFSADLAHEIRTPIGSLMGHGQVALRQPRSNEEYQALIASNQEELERIARMVESILFLARADDVRAAVERSRLDLGEELRRQAEYFEGLAEERGLSLDIQISGQLRADPQLFRRALSNLLANAIRYANAESLIEVRGLRRSGEFLLSVENACDRLPAEPLSRLFDRFYRGDAARSDAQSSGLGLAIVQAIMRLHGGRAEASAPAPGRIRFELAFPAQD
>NZ_FRQN01000024.1|WP_023101622.1|218419_219736_-|MFS-transporter
MFSPLVTFPALYTATLLMLAGSGLFTTYIGLRLTQEGAGDLWVGGLMASYYFGLVCGGKFGHKLIASFGHIRSYVACAGIATVTVLLHALVDQLEVWLLLRFITGAVMMNQYMVIESWLNEQAESHQRGKVFAGYMVAVDLGLVLGQGLLALSPTLDYKPLLLVAICFASCLIPLAMTRRVHPAKLVAAPLEVRFFWQRVPQALGTIFIAGLMVGAFYGLAPVYANRNGLDAAQSSFFVGMCIVAGFCAQWPLGWLSDRLDRSWLIRGNAVLLCLASIPMWGLVTLPYWLLLANGFVTGMLLFTLYPLAVALANDHVEQPRRVALSAMLLTTYGVGACIGPLVAGALMRHFGPGLFYMLVSGYAVLLVFWVQPKRVTGEHRVDEAPLQHVAMPDTVSPMAATLDPRVEEVPEELVVEAPANIGRSDGEPDAGEKPAQS
>NZ_FRQN01000024.1|WP_073665422.1|219955_221068_-|fatty-acid-desaturase
MNRPASPAMRDDRELTPEQLAAFGAELDALRQRTLADLGADDARYIRRVRAAVRVCCWSGRALLMFGWLPPTWLLGSLLLGLGKILENMELGHNVMHGQYDWMNDPEFAGRAYEWDIAGPSDFWRHTHNHIHHTYTNVLGKDDDVGYGVVRLFPEQRWKPFYRWQPLWVTLQALLFQYAVAIQHLRLDKYAKGRLDKAELMPLLRRLRAKLGRQWTKDYLLFPLLGLFAGGFGAVFVGNLLANVLRNLWTFTVIFCGHFTEKAVVFPPSVLEGETRGHWYLRQLRGSSNLEGGPLFHILTGNLSHQIEHHLYPDLPARRYAALSREVREIARRYGQTYNSGRLGRQFLTVLRRIWVYRLPPREPLPARRG
>NZ_FRQN01000024.1|WP_023101624.1|221064_222165_-|ferredoxin-reductase
MALLPLALLTPLLAPLRRLAARGWLREADVDGLLRHAHPLASLNRHYARVEARYWVADDMLALALRTAPGWPPARPGQHIQLLAERDGVRVGRSYSLTRVVGERLEIAVKRHPDGLLSPWLCEHLAVGQRVELQPAQGDLRWPMQAEAVCLLAAGSGLTPLLGLLREALENGYRGPVLWLHYARHPGQRAWLGELEALAARHPNLELRWSLTRGARADGCLEGHFQPRHLDGWAADLARSQALACGPAAFVEAVGEQLGARFAGLQTESFSVPRWRSGEAPREVRLRFARSQREVSGDSAASLLEQAEAHGLRPAHGCRQGICASCTCVLLSGCVRDLRSGALCSEPGQSIRLCVSAAHGDLALDL
>NZ_FRQN01000024.1|WP_003095524.1|222323_222953_+|TetR-family-transcriptional-regulator
MSSPRAEQKQQTRHALMSAARHLMESGRGFGSLSLREVTRAAGIVPAGFYRHFSDMDQLGLALVAEVDETFRATLRAVRRNEFELGGLIDASVRIFLDAVGANRSQFLFLAREQYGGSLPIRQAIASLRQRITDDLAADLALLNKMPHLDGAALDVFADLVVKTVFATLPELIDPPAADLPPHLMPAAKITHQLRFIMIGGKHWHGLPD
>NZ_FRQN01000024.1|WP_023101625.1|223182_223686_+|urease-accessory-protein-UreE
MLVIHQRLPARSPRWDEELHLTYEARSKSRLRCFTASGEEVGLFLERGQPPLADGDCLEARDGRLVRVVARPERLLHVTCASPLELTRAAYHLGNRHVALQVGDGWLRLLDDYVLKAMLEQLGATVEAIEAPFQPEHGAYGGGHHHSHHGEAEFNYAPRLHQFGVRR

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Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

6. NZ_FRQN01000032

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

96360 : 183355

Pseudomonas_virus(60.78%)

capsid,head,plate,tRNA,portal,tail,protease,holin,terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_021263284.1\|96360_97815_-\|tRNA	tRNA 4-thiouridine(8) synthase ThiI	NA	NA	NA	NA
WP_003096016.1\|98151_99561_+	glutamate--ammonia ligase	NA	NA	NA	NA
WP_003096019.1\|99708_100113_+	hypothetical protein	NA	NA	NA	NA
WP_003111156.1\|100109_102317_-	mechanosensitive ion channel family protein	NA	NA	NA	NA
WP_003111155.1\|102604_103126_+	DUF4124 domain-containing protein	NA	NA	NA	NA
WP_021263283.1\|103122_103695_+	DUF4124 domain-containing protein	NA	NA	NA	NA
WP_003096033.1\|103965_105042_+	nitrogen regulation protein NR(II)	W8CYF6	Bacillus_phage	7.6e-12	29.1
WP_003104661.1\|105044_106475_+	nitrogen regulation protein NR(I)	NA	NA	NA	NA
WP_003096038.1\|107276_107744_-	hypothetical protein	NA	NA	NA	NA
WP_021263282.1\|107742_108204_+\|tRNA	tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL	NA	NA	NA	NA
WP_003096050.1\|108262_108754_-	protein-export chaperone SecB	NA	NA	NA	NA
WP_003096057.1\|108790_109045_-	glutaredoxin 3	V9QKN6	Rhizobium_phage	1.6e-13	43.4
WP_003096058.1\|109046_109466_-	rhodanese-like domain-containing protein	NA	NA	NA	NA
WP_021263281.1\|109790_111338_+	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	NA	NA	NA	NA
WP_021263280.1\|111651_112470_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_003123645.1\|112619_113906_+	murein hydrolase activator EnvC	I2E8W3	Clostridium_phage	4.2e-09	36.7
WP_003096067.1\|113934_115245_+	S41 family peptidase	A0A0R6PIZ1	Moraxella_phage	3.9e-26	29.0
WP_073665467.1\|115244_116018_+	divergent polysaccharide deacetylase family protein	NA	NA	NA	NA
WP_021263277.1\|116086_117568_+	hypothetical protein	NA	NA	NA	NA
WP_003096075.1\|117608_118364_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_021263276.1\|118513_119266_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_003111636.1\|119356_120103_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_003106334.1\|120274_121045_-	imidazole glycerol phosphate synthase subunit HisF	NA	NA	NA	NA
WP_003106336.1\|121055_121793_-	1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase	A0A2H4UVM0	Bodo_saltans_virus	8.0e-05	25.7
WP_003111635.1\|121841_122102_-	DUF2164 domain-containing protein	NA	NA	NA	NA
WP_023092720.1\|122105_122744_-	imidazole glycerol phosphate synthase subunit HisH	NA	NA	NA	NA
WP_003096088.1\|122743_123337_-	imidazoleglycerol-phosphate dehydratase HisB	NA	NA	NA	NA
WP_009878269.1\|123497_123896_+	acetyl-CoA sensor PanZ family protein	NA	NA	NA	NA
WP_009314450.1\|123932_124169_+	hypothetical protein	NA	NA	NA	NA
WP_023101649.1\|124165_125272_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_003096096.1\|125365_127618_+	AsmA family protein	NA	NA	NA	NA
WP_003110600.1\|127614_128682_+	A/G-specific adenine glycosylase	G3CB03	Aeropyrum_pernix_spindle-shaped_virus	4.8e-27	32.7
WP_003096100.1\|128725_128998_+	oxidative damage protection protein	NA	NA	NA	NA
WP_021263273.1\|129025_130108_+	oxidoreductase	NA	NA	NA	NA
WP_003096148.1\|130353_131091_-	SDR family oxidoreductase	Q06VL0	Trichoplusia_ni_ascovirus	4.1e-09	27.7
WP_003110598.1\|131249_131939_+	DUF502 domain-containing protein	NA	NA	NA	NA
WP_003096153.1\|132187_132961_+	ABC transporter ATP-binding protein	A0A2H4UUX5	Bodo_saltans_virus	1.2e-06	23.7
WP_003096156.1\|132975_133728_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_003110597.1\|133789_134485_+	ABC transporter permease	NA	NA	NA	NA
WP_003096163.1\|134481_135174_+	ABC transporter permease	NA	NA	NA	NA
WP_021263146.1\|135242_136463_+	methyltransferase	NA	NA	NA	NA
WP_003110596.1\|136861_137332_+	MarR family transcriptional regulator	NA	NA	NA	NA
WP_009314457.1\|137335_138814_+	efflux transporter outer membrane subunit	NA	NA	NA	NA
WP_003110594.1\|138828_140013_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_003096173.1\|140023_141553_+	DHA2 family efflux MFS transporter permease subunit	NA	NA	NA	NA
WP_073665468.1\|142536_143298_-	DNA adenine methylase	A2I2Y7	Vibrio_virus	1.2e-107	71.6
WP_033945207.1\|143453_144509_-\|portal	phage portal protein	Q9ZXM6	Pseudomonas_virus	4.4e-198	97.7
WP_073665483.1\|144505_146269_-\|terminase	terminase ATPase subunit family protein	Q9ZXM5	Pseudomonas_virus	0.0e+00	99.7
WP_060853285.1\|146424_147246_+\|capsid	GPO family capsid scaffolding protein	Q9ZXM4	Pseudomonas_virus	3.7e-128	96.0
WP_003098375.1\|147281_148298_+\|capsid	phage major capsid protein, P2 family	Q9ZXM3	Pseudomonas_virus	8.6e-191	99.1
WP_023083461.1\|148303_149005_+\|terminase	terminase endonuclease subunit	Q9ZXM2	Pseudomonas_virus	6.2e-124	98.7
WP_033937624.1\|149108_149570_+\|head	head completion/stabilization protein	Q9ZXM1	Pseudomonas_virus	1.8e-79	97.4
WP_003098378.1\|149569_149782_+\|tail	tail protein X	Q9ZXL9	Pseudomonas_virus	4.9e-32	94.1
WP_003098379.1\|149806_150160_+	hypothetical protein	Q9ZXL8	Pseudomonas_virus	6.0e-59	100.0
WP_003098380.1\|150161_150434_+\|holin	phage holin family protein	Q9ZXL7	Pseudomonas_virus	2.6e-38	97.8
WP_033937622.1\|150430_151237_+	N-acetylmuramidase family protein	Q9ZXL6	Pseudomonas_virus	1.3e-149	98.1
WP_058139050.1\|151233_151695_+	peptidase	Q9ZXL5	Pseudomonas_virus	4.7e-72	98.7
WP_016852031.1\|151772_152309_+\|tail	phage tail protein	Q9ZXL3	Pseudomonas_virus	7.9e-95	98.9
WP_070743165.1\|152301_152784_+	phage virion morphogenesis protein	Q9ZXL2	Pseudomonas_virus	6.3e-59	80.7
WP_161564855.1\|152831_153596_+	DUF2971 domain-containing protein	NA	NA	NA	NA
WP_073665470.1\|153624_154725_+	CBS domain-containing protein	NA	NA	NA	NA
WP_073665471.1\|154815_155388_+\|plate	phage baseplate assembly protein V	Q9ZXL0	Pseudomonas_virus	1.4e-89	95.8
WP_023093071.1\|155384_155729_+	GPW/gp25 family protein	Q9ZXK9	Pseudomonas_virus	4.6e-56	97.4
WP_058198668.1\|155725_156643_+\|plate	baseplate assembly protein	Q9ZXK8	Pseudomonas_virus	9.9e-146	88.5
WP_073665472.1\|156639_157257_+\|tail	phage tail protein I	A0A2H4JAU2	uncultured_Caudovirales_phage	2.7e-86	75.3
WP_073665473.1\|159080_159515_+\|tail	phage tail protein	Q9ZXK5	Pseudomonas_virus	3.8e-31	52.2
WP_023116069.1\|159615_160791_+\|tail	phage tail sheath protein	Q9ZXK4	Pseudomonas_virus	4.6e-220	99.0
WP_023116070.1\|160847_161363_+\|tail	phage major tail tube protein	Q9ZXK3	Pseudomonas_virus	2.1e-89	94.2
WP_023116071.1\|161417_161747_+\|tail	phage tail assembly protein	Q9ZXK2	Pseudomonas_virus	4.0e-49	96.3
WP_003098394.1\|161755_161875_+\|tail	GpE family phage tail protein	Q9ZXK1	Pseudomonas_virus	1.8e-15	100.0
WP_073665474.1\|161864_164579_+\|tail	phage tail tape measure protein	Q9ZXK0	Pseudomonas_virus	0.0e+00	96.9
WP_003098399.1\|164584_165025_+\|tail	phage tail protein	Q9ZXJ9	Pseudomonas_virus	1.8e-76	99.3
WP_073665475.1\|165021_166305_+	phage late control D family protein	Q9ZXJ8	Pseudomonas_virus	2.0e-237	98.1
WP_073665476.1\|166365_167169_+	Dam family site-specific DNA-(adenine-N6)-methyltransferase	A0A1S5PRR3	Streptococcus_phage	4.3e-44	36.5
WP_052154595.1\|167165_168362_-	DGQHR domain-containing protein	NA	NA	NA	NA
WP_124119585.1\|168358_168856_-	hypothetical protein	NA	NA	NA	NA
WP_174516187.1\|169071_169488_-	helix-turn-helix domain-containing protein	E5FFF8	Burkholderia_phage	3.9e-09	49.2
WP_033936701.1\|169576_169807_+	phage-associated protein, BcepMu gp16 family	NA	NA	NA	NA
WP_023127024.1\|169836_170307_+	hypothetical protein	Q9ZXJ2	Pseudomonas_virus	5.5e-76	98.1
WP_003098408.1\|170303_170597_+	ogr/Delta-like zinc finger family protein	Q9ZXJ1	Pseudomonas_virus	1.1e-50	99.0
WP_033936702.1\|170593_170944_+	hypothetical protein	A0A2H4J947	uncultured_Caudovirales_phage	3.0e-10	36.4
WP_033936703.1\|171014_171248_+	hypothetical protein	Q9ZXI9	Pseudomonas_virus	2.9e-38	98.7
WP_073665477.1\|171244_173965_+	toprim domain-containing protein	Q9ZXI8	Pseudomonas_virus	0.0e+00	99.2
WP_073665478.1\|174009_174363_+	hypothetical protein	Q9ZXI7	Pseudomonas_virus	9.3e-60	96.6
WP_003098417.1\|174374_174581_+	TraR/DksA family transcriptional regulator	Q9ZXI6	Pseudomonas_virus	7.3e-33	100.0
WP_073665479.1\|174884_176795_+	DNA cytosine methyltransferase	A0A0U1T6D1	Pseudomonas_phage	5.2e-266	90.1
WP_073665480.1\|176791_178024_+	phosphoadenosine phosphosulfate reductase family protein	R9TRT5	Rhizobium_phage	4.4e-173	71.1
WP_023096294.1\|178034_178223_+	hypothetical protein	Q38017	Pseudomonas_virus	3.5e-05	70.6
WP_023096295.1\|178219_178432_+	DUF4224 domain-containing protein	NA	NA	NA	NA
WP_023096296.1\|178428_179577_+	hypothetical protein	V9IQN0	Stenotrophomonas_phage	1.1e-72	41.3
WP_003096179.1\|179968_181027_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	1.0e-85	47.9
WP_023101701.1\|181023_181932_+	dTDP-4-dehydrorhamnose reductase	A0A1D7XFA3	Escherichia_phage	2.6e-29	35.6
WP_016264055.1\|181928_182810_+	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	1.2e-100	60.6
WP_009314461.1\|182809_183355_+	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A291LA62	Escherichia_phage	2.5e-51	54.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

7. NZ_FRQN01000073

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

138526 : 199716

Pseudomonas_phage(53.45%)

integrase,holin,tRNA,tail

attL 168889:168905|attR 208737:208753

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_043088342.1\|138526_139042_+	hypothetical protein	A0A0U1VYP0	Pseudomonas_phage	4.3e-90	91.7
WP_004354886.1\|140116_140362_-	hypothetical protein	NA	NA	NA	NA
WP_021263881.1\|140358_140847_-	hypothetical protein	NA	NA	NA	NA
WP_003160542.1\|140951_141215_-	hypothetical protein	Q9MC87	Pseudomonas_phage	9.0e-44	94.3
WP_003130908.1\|141250_141514_-	hypothetical protein	B5WZU5	Pseudomonas_phage	4.5e-35	88.5
WP_043088341.1\|141510_141879_-	hypothetical protein	H2BDD6	Pseudomonas_virus	8.2e-43	82.0
WP_043088340.1\|141875_142505_-	glycoside hydrolase family 19 protein	A0A125RNP1	Pseudomonas_phage	3.0e-109	94.7
WP_043088350.1\|142547_143273_-	hypothetical protein	A0A2H4J1J6	uncultured_Caudovirales_phage	1.7e-55	56.7
WP_043090367.1\|144632_148079_-\|tail	phage tail protein	A0A0S2SYC5	Pseudomonas_phage	0.0e+00	98.1
WP_143178343.1\|148224_148668_+	hypothetical protein	NA	NA	NA	NA
WP_043088222.1\|148694_149279_-\|tail	tail assembly protein	A0A0S2SYS2	Pseudomonas_phage	2.1e-101	98.4
WP_043088221.1\|149802_150561_-	C40 family peptidase	A0A0S2SY75	Pseudomonas_phage	8.7e-148	98.0
WP_033946795.1\|150563_151313_-\|tail	phage minor tail protein L	A0A0S2SY57	Pseudomonas_phage	3.9e-148	99.6
WP_039027458.1\|151309_151648_-\|tail	phage tail protein	A0A0S2SYI2	Pseudomonas_phage	1.5e-59	98.2
WP_043088218.1\|151653_154845_-\|tail	phage tail tape measure protein	A0A2H4J9A1	uncultured_Caudovirales_phage	1.8e-157	41.0
WP_003451660.1\|154841_155105_-	DUF1799 domain-containing protein	A0A2R3UAE2	Siphoviridae_environmental_samples	9.4e-17	47.1
WP_043088217.1\|155167_155548_-\|tail	phage tail assembly chaperone	A0A2H4IYQ5	uncultured_Caudovirales_phage	1.6e-28	50.4
WP_003451664.1\|155557_156211_-\|tail	phage tail protein	A0A2H4IZV5	uncultured_Caudovirales_phage	1.3e-59	52.3
WP_043088216.1\|156278_156689_-	DUF4128 domain-containing protein	A0A2H4J130	uncultured_Caudovirales_phage	2.7e-26	47.0
WP_003451670.1\|156685_157360_-	hypothetical protein	A0A0S2SY81	Pseudomonas_phage	4.6e-116	96.4
WP_034068215.1\|157363_157753_-	hypothetical protein	A0A2H4JAS3	uncultured_Caudovirales_phage	1.1e-32	55.0
WP_019396737.1\|157752_158217_-	hypothetical protein	H9EB35	Vibrio_phage	5.2e-10	36.4
WP_043088215.1\|158200_158686_-	hypothetical protein	NA	NA	NA	NA
WP_034068212.1\|158727_159699_-	hypothetical protein	A0A0M3LQL5	Mannheimia_phage	1.2e-109	64.7
WP_034068241.1\|159708_160452_-	hypothetical protein	A0A0H5AWD1	Pseudomonas_phage	6.5e-87	75.0
WP_034068210.1\|160580_161660_-	hypothetical protein	A0A0S2SY77	Pseudomonas_phage	2.3e-202	98.6
WP_034010879.1\|161656_163012_-	DUF4055 domain-containing protein	A0A0H5AWC7	Pseudomonas_phage	3.3e-97	46.3
WP_052155832.1\|163014_164340_-	hypothetical protein	A0A2H4GY89	Pseudomonas_phage	6.4e-178	69.0
WP_003119044.1\|165108_165444_-\|holin	phage holin, lambda family	A0A1W6JTC7	Pseudomonas_phage	2.2e-58	100.0
WP_019486655.1\|165903_166083_+	type II toxin-antitoxin system HicA family toxin	A0A2H4JDU5	uncultured_Caudovirales_phage	3.2e-08	55.0
WP_021263386.1\|166123_166699_+	type II toxin-antitoxin system HicB family antitoxin	A0A2H4JFV9	uncultured_Caudovirales_phage	3.2e-17	39.7
WP_043088211.1\|166789_167659_-	hypothetical protein	J7HXH6	Pseudomonas_phage	9.7e-159	94.8
WP_043088210.1\|167687_168131_-	RusA family crossover junction endodeoxyribonuclease	J7I4J7	Pseudomonas_phage	6.4e-74	95.2
WP_025921087.1\|168123_168732_-	hypothetical protein	A0A2H4J6S4	uncultured_Caudovirales_phage	5.2e-42	45.3
168889:168905	attL	NA	NA	NA	NA
WP_016046669.1\|169668_170241_-	hypothetical protein	H2BD67	Pseudomonas_phage	9.3e-102	100.0
WP_003451709.1\|170272_170491_-	helix-turn-helix domain-containing protein	A0A2D1GND2	Pseudomonas_phage	2.9e-19	64.7
WP_052155833.1\|170870_171443_+	S24 family peptidase	H2BD63	Pseudomonas_phage	1.1e-86	91.7
WP_071534306.1\|171546_173277_+	ATP-binding protein	NA	NA	NA	NA
WP_043088205.1\|173346_174225_+	DNA adenine methylase	A0A1D7SDB2	Cyanophage	5.6e-13	27.3
WP_043088203.1\|174663_174996_-	DUF1654 domain-containing protein	H2BD60	Pseudomonas_phage	3.8e-47	90.7
WP_034010860.1\|175475_175952_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_043498859.1\|176828_177200_+	carbon storage regulator CsrA	J7I430	Pseudomonas_phage	5.5e-63	99.2
WP_178383526.1\|177699_177852_+	hypothetical protein	J7HXJ0	Pseudomonas_phage	2.6e-11	100.0
WP_003099037.1\|177835_178057_+	hypothetical protein	H2BD53	Pseudomonas_phage	1.2e-33	100.0
WP_010793152.1\|178053_178263_+	hypothetical protein	NA	NA	NA	NA
WP_034074125.1\|178273_179182_+	YqaJ viral recombinase family protein	Q858E0	Salmonella_phage	2.1e-124	72.3
WP_058183110.1\|179194_180094_+	recombination protein RecT	Q858E1	Salmonella_phage	3.2e-104	73.6
WP_003116739.1\|180100_180301_+	hypothetical protein	H2BD48	Pseudomonas_phage	4.3e-30	100.0
WP_034027047.1\|180313_181285_+	DNA translocase FtsK	H2BD47	Pseudomonas_phage	3.7e-175	99.4
WP_073665636.1\|181288_183031_+	AAA family ATPase	J7HXJ7	Pseudomonas_phage	3.7e-303	98.6
WP_023083709.1\|183177_185808_+	hypothetical protein	J7I4L6	Pseudomonas_phage	0.0e+00	98.3
WP_073665637.1\|185804_187493_+	DNA cytosine methyltransferase	L7TH64	Pseudomonas_virus	1.7e-297	94.8
WP_073665638.1\|187489_187936_+	hypothetical protein	Q6JIG5	Burkholderia_virus	6.2e-53	70.3
WP_073665639.1\|187932_188403_+	hypothetical protein	A0A2K8HVL6	Pseudomonas_phage	5.2e-74	89.7
WP_073665640.1\|188399_189023_+	hypothetical protein	A0A0U1SZL2	Pseudomonas_phage	4.9e-96	83.3
WP_073665641.1\|189019_189553_+	DUF1643 domain-containing protein	A0A0U1W068	Pseudomonas_phage	3.9e-94	96.9
WP_124074636.1\|189530_189779_-	hypothetical protein	NA	NA	NA	NA
WP_003116724.1\|191181_191418_+	DUF4224 domain-containing protein	A0A2H4JF29	uncultured_Caudovirales_phage	3.8e-17	53.2
WP_031688007.1\|191419_192487_+\|integrase	tyrosine-type recombinase/integrase	A0A2H4JDJ8	uncultured_Caudovirales_phage	1.1e-135	68.7
WP_021264895.1\|192822_193491_+	Bax inhibitor-1/YccA family protein	A0A2H4JFM9	uncultured_Caudovirales_phage	1.9e-90	81.6
WP_023099506.1\|193601_193997_+	sulfurtransferase complex subunit TusD	A0A2H4JA39	uncultured_Caudovirales_phage	4.5e-47	71.3
WP_073665642.1\|193993_194353_+	sulfurtransferase complex subunit TusC	A0A2H4J8C0	uncultured_Caudovirales_phage	1.4e-34	61.7
WP_021264896.1\|194352_194658_+	sulfurtransferase complex subunit TusB	A0A2H4JG28	uncultured_Caudovirales_phage	3.3e-21	58.6
WP_021264897.1\|194654_194990_+	TusE/DsrC/DsvC family sulfur relay protein	A0A2H4J8B6	uncultured_Caudovirales_phage	9.5e-38	68.5
WP_003108776.1\|194986_195970_+	glycosyl transferase family protein	A0A2H4JBY5	uncultured_Caudovirales_phage	9.3e-142	74.3
WP_003097628.1\|196057_197032_+	glutathione S-transferase family protein	NA	NA	NA	NA
WP_003108773.1\|197036_198434_-	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA
WP_003097631.1\|198435_199716_-\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	8.2e-98	45.4
208737:208753	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

8. NZ_FRQN01000028

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_FRQN01000028_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_FRQN01000028_1

290883-290996

Orphan

Consensus_repeat	Method
TCATACCTTGCCCTCCAGTTCTTTGGCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_FRQN01000028_1

>merge|NZ_FRQN01000028|1|290883-290996|CRISPRCasFinder
TCATACCTTGCCCTCCAGTTCTTTGGCCACGCTTCTGGATGGAGAGCCTGTTGAACGGGATACGGAGCGGGATACGCTGTGCTGGCTCATACCTTGCCCTCCAGTTCTTTGGCC

>NZ_FRQN01000028|1|1|290883-290996|CRISPRCasFinder
TCATACCTTGCCCTCCAGTTCTTTGGCC	ACGCTTCTGGATGGAGAGCCTGTTGAACGGGATACGGAGCGGGATACGCTGTGCTGGC
TCATACCTTGCCCTCCAGTTCTTTGGCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_FRQN01000028.1\|WP_073665450.1\|281977_282532_+\|hypothetical-protein	unknown	unknown	unknown
NZ_FRQN01000028.1\|WP_003084333.1\|281217_281712_-\|DUF523-domain-containing-protein	unknown	unknown	gnl\|CDD\|224597
NZ_FRQN01000028.1\|WP_003084299.1\|294601_295705_-\|polyamine-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270377
NZ_FRQN01000028.1\|WP_003112941.1\|286288_287341_-\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|378890
NZ_FRQN01000028.1\|WP_023100735.1\|301318_302380_+\|polyamine-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270377
NZ_FRQN01000028.1\|WP_021263266.1\|298655_299408_-\|gamma-glutamyl-gamma-aminobutyrate-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|336781
NZ_FRQN01000028.1\|WP_021263265.1\|285090_285702_+\|thiol-disulfide-isomerase	unknown	unknown	gnl\|CDD\|239267
NZ_FRQN01000028.1\|WP_023098346.1\|283300_284053_+\|hypothetical-protein	unknown	unknown	unknown
NZ_FRQN01000028.1\|WP_003084301.1\|293085_294183_-\|polyamine-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270377
NZ_FRQN01000028.1\|WP_023100736.1\|287451_289839_+\|penicillin-acylase-family-protein	unknown	unknown	gnl\|CDD\|225241
NZ_FRQN01000028.1\|WP_003084290.1\|297256_298615_-\|glutamine-synthetase	unknown	unknown	gnl\|CDD\|223252
NZ_FRQN01000028.1\|WP_003112937.1\|299686_301063_+\|glutamine-synthetase	unknown	unknown	gnl\|CDD\|223252
NZ_FRQN01000028.1\|WP_021263264.1\|284072_285092_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|225176
NZ_FRQN01000028.1\|WP_003112942.1\|285806_286310_+\|transcriptional-regulator	unknown	unknown	unknown
NZ_FRQN01000028.1\|WP_023656933.1\|282553_283252_-\|2OG-Fe(II)-oxygenase	unknown	unknown	gnl\|CDD\|226274
NZ_FRQN01000028.1\|WP_003084297.1\|295820_297191_-\|aspartate-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|180994
NZ_FRQN01000028.1\|WP_003111119.1\|303268_304147_+\|N-carbamoylputrescine-amidase	unknown	unknown	gnl\|CDD\|274553
NZ_FRQN01000028.1\|WP_003084303.1\|291876_293031_-\|polyamine-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|183226
NZ_FRQN01000028.1\|WP_003084271.1\|302440_303106_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_FRQN01000028.1\|WP_003084339.1\|280520_281213_+\|amino-acid-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223836

Protein	Function_ID	Function_description	E-value
NZ_FRQN01000028.1\|WP_003084333.1\|281217_281712_-\|DUF523-domain-containing-protein	gnl\|CDD\|224597	COG1683, COG1683, Uncharacterized conserved protein [Function unknown].	1.65548e-66
NZ_FRQN01000028.1\|WP_021263265.1\|285090_285702_+\|thiol-disulfide-isomerase	gnl\|CDD\|239267	cd02969, PRX_like1, Peroxiredoxin (PRX)-like 1 family; hypothetical proteins that show sequence similarity to PRXs. Members of this group contain a conserved cysteine that aligns to the first cysteine in the CXXC motif of TRX. This does not correspond to the peroxidatic cysteine found in PRXs, which aligns to the second cysteine in the CXXC motif of TRX. In addition, these proteins do not contain the other two conserved residues of the catalytic triad of PRX. PRXs confer a protective antioxidant role in cells through their peroxidase activity in which hydrogen peroxide, peroxynitrate, and organic hydroperoxides are reduced and detoxified using reducing equivalents derived from either thioredoxin, glutathione, trypanothione and AhpF.	0.00343174
NZ_FRQN01000028.1\|WP_003112941.1\|286288_287341_-\|AraC-family-transcriptional-regulator	gnl\|CDD\|378890	pfam12625, Arabinose_bd, Arabinose-binding domain of AraC transcription regulator, N-term. AraC is a bacterial transcriptional regulatory protein with a DNA-binding domain at the C-terminus, HTH_AraC, pfam00165, and this dimerization domain which harbours the arabinose-binding pocket at the N-terminus. AraC positively and negatively regulates expression of the proteins required for the uptake and catabolism of the sugar L-arabinose 1,2,3].	2.54039e-32
NZ_FRQN01000028.1\|WP_023100735.1\|301318_302380_+\|polyamine-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270377	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold. This group represents the periplasmic substrate-binding domain that serves as the primary polyamine receptor of ABC-type putrescine-preferential transporter from gram-negative bacteria. Polyamine transport plays an essential role in the regulation of intracellular polyamine levels which are known to be elevated in rapidly proliferating cells and tumors. Natural polyamines are putrescine, spermindine, and spermine. They are polycations that play multiple roles in cell growth, survival and proliferation, and plant stress and disease resistance. They can interact with negatively charged molecules, such as nucleic acids, to modulate their functions. Members of this family belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	1.86872e-164
NZ_FRQN01000028.1\|WP_021263266.1\|298655_299408_-\|gamma-glutamyl-gamma-aminobutyrate-hydrolase-family-protein	gnl\|CDD\|336781	pfam07722, Peptidase_C26, Peptidase C26. These peptidases have gamma-glutamyl hydrolase activity; that is they catalyze the cleavage of the gamma-glutamyl bond in poly-gamma-glutamyl substrates. They are structurally related to pfam00117, but contain extensions in four loops and at the C-terminus.	1.85062e-107
NZ_FRQN01000028.1\|WP_003084299.1\|294601_295705_-\|polyamine-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270377	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold. This group represents the periplasmic substrate-binding domain that serves as the primary polyamine receptor of ABC-type putrescine-preferential transporter from gram-negative bacteria. Polyamine transport plays an essential role in the regulation of intracellular polyamine levels which are known to be elevated in rapidly proliferating cells and tumors. Natural polyamines are putrescine, spermindine, and spermine. They are polycations that play multiple roles in cell growth, survival and proliferation, and plant stress and disease resistance. They can interact with negatively charged molecules, such as nucleic acids, to modulate their functions. Members of this family belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	0
NZ_FRQN01000028.1\|WP_003084301.1\|293085_294183_-\|polyamine-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270377	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold. This group represents the periplasmic substrate-binding domain that serves as the primary polyamine receptor of ABC-type putrescine-preferential transporter from gram-negative bacteria. Polyamine transport plays an essential role in the regulation of intracellular polyamine levels which are known to be elevated in rapidly proliferating cells and tumors. Natural polyamines are putrescine, spermindine, and spermine. They are polycations that play multiple roles in cell growth, survival and proliferation, and plant stress and disease resistance. They can interact with negatively charged molecules, such as nucleic acids, to modulate their functions. Members of this family belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	0
NZ_FRQN01000028.1\|WP_003084303.1\|291876_293031_-\|polyamine-ABC-transporter-ATP-binding-protein	gnl\|CDD\|183226	PRK11607, potG, putrescine ABC transporter ATP-binding subunit PotG.	0
NZ_FRQN01000028.1\|WP_003084290.1\|297256_298615_-\|glutamine-synthetase	gnl\|CDD\|223252	COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism].	5.71424e-158
NZ_FRQN01000028.1\|WP_003112937.1\|299686_301063_+\|glutamine-synthetase	gnl\|CDD\|223252	COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism].	1.09186e-161
NZ_FRQN01000028.1\|WP_021263264.1\|284072_285092_-\|alpha/beta-hydrolase	gnl\|CDD\|225176	COG2267, PldB, Lysophospholipase [Lipid metabolism].	2.87573e-56
NZ_FRQN01000028.1\|WP_023656933.1\|282553_283252_-\|2OG-Fe(II)-oxygenase	gnl\|CDD\|226274	COG3751, EGL-9, Predicted proline hydroxylase [Posttranslational modification, protein turnover, chaperones].	1.58503e-77
NZ_FRQN01000028.1\|WP_003084297.1\|295820_297191_-\|aspartate-aminotransferase-family-protein	gnl\|CDD\|180994	PRK07480, PRK07480, putative aminotransferase; Validated.	0
NZ_FRQN01000028.1\|WP_003111119.1\|303268_304147_+\|N-carbamoylputrescine-amidase	gnl\|CDD\|274553	TIGR03381, putative_carbon-nitrogen_hydrolase, N-carbamoylputrescine amidase. Members of this family are N-carbamoylputrescine amidase (3.5.1.53). Bacterial genes are designated AguB. The AguAB pathway replaces SpeB for conversion of agmatine to putrescine in two steps rather than one. [Central intermediary metabolism, Polyamine biosynthesis].	0
NZ_FRQN01000028.1\|WP_023100736.1\|287451_289839_+\|penicillin-acylase-family-protein	gnl\|CDD\|225241	COG2366, COG2366, Protein related to penicillin acylase [General function prediction only].	0
NZ_FRQN01000028.1\|WP_003084271.1\|302440_303106_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	1.54898e-08
NZ_FRQN01000028.1\|WP_003084339.1\|280520_281213_+\|amino-acid-ABC-transporter-permease	gnl\|CDD\|223836	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism].	3.29364e-79

>NZ_FRQN01000028.1|WP_023100736.1|287451_289839_+|penicillin-acylase-family-protein
MKRTLTVIAVAVAAAAAGGAWYLHAKQPLRNGSLALAHLQAPVDVRYDERGVPHLYAQNQTDLYRALGYVHAQDRLFQMEMLRRLARGELAEVLGPKLVDTDRLFRTLRIRDHAAEYSARQDKQSQPWKVLEAYLDGVNQFQENNPAPLEFDLLGIPRRPFTPEDTLSIAGYMAYSFAAAFRTEPVLTYIRDELGSDYLRIFDLDWHPQGVLTPSGALGAGDWKDLGALARISQQALEDAGLPQFEGSNAWVVAGSRTASGKPLLAGDPHIRFAAPAVWYEAQLSAPGFELYGHHQALNPFASLGHNRAFGWSLTMFQNDDLDLVAEKVNPDNPNQVWYQGKWVDLQSEEQEIAVKGAAPVKLTLRRSPHGPIVNDALGASSGKTPIAMWWAFLETENPVLDAFYQLNRADTLAKARAAASKIHSPGLNLVWANAAGDIGWWASAALPKRPEGVNPSFILDGSKGEADKSGFYPFADNPQEENPARGYIVSANFQPVPANGRPIPGYYNLADRGQWLDTQLADRGTKWNLDNSRALQLGNRTGYAPRLLAPLLPVLREVVDDAEGKRLVEQLAAWKGDYPVDSTAATLFNQLLFQIAEGALHDELGDAFFDSLIATRAIDSALPRLAADADSPWWDDRRTERRETRADIVRAAWNASLAHLRSTLGNDPSGWLWGKAHTLTHEHALGQQALLKRLLNVGPFAAPGTHEVPNNLSAKIGPAPWAVTYGPSTRRLVDFADPTHSLGINPVGQSGVPFDGHYDDQAEAYIEGHYLPQHYEENEVKANSKGVLVLEPKR
>NZ_FRQN01000028.1|WP_003112941.1|286288_287341_-|AraC-family-transcriptional-regulator
MQDDPSTSPLTHSATLRRLLYEALDALGLDPTRVYRSVYRRIPLPPPTLGGRLVHDNAPLFWTELAAVTGDADIGLHLGEAMKPRLLDVVGYLLLSARDLEEALRSFVRFQHILSGGFAARLEVEGETARLILDINYLGYASLRQQIECLMLLFLKLLALISDDEFVAERIEFRHRAPPRLGEHRRLFGRLPLFSRPHDALVFSAALLRRPSRNANPDMHDVLTRHAEEQSRELSENRLLNRVRYLIELRLGEGYGLRQCAAELGLGSGALQRALAAGGASFRQVRDEVRRQRASEMLLAGRAIREVAKACGFAELSPFYRAFRRWHAAPPEQYRARLAKREEGYSTSGT
>NZ_FRQN01000028.1|WP_003112942.1|285806_286310_+|transcriptional-regulator
MSLRPTLALLALVSLPLMAAQNDPQPSSKELMKEHQAQIQNDLADVDYKRKRIVEANMNLTDQEGEKFWPIYNTYRTESDKLSKETLKLLLDYAQAYNSGNVSDDQASKLIERVDDLQEDRLELRDKYVKRIAKNVSPKRAMRFLQIEIQLDAIATLEIGRQVPLVE
>NZ_FRQN01000028.1|WP_021263265.1|285090_285702_+|thiol-disulfide-isomerase
MASLAPVFRVNAMTPRRKTLLVSLVGLLWAGGLLAAYWWFEIRYIRPFSEQTTLFSGDSLRLPAELAGPGPIRLVHFWDPACPCNVGNQQHLGELIERFAGKGVEFHVLQKPGSQGRLPDNLAALRPLAGLPGSEQLPASPAVAIWDRDGRLAYFGPYSEGAVCTSSNSFIEPILEALLQGRPVDATHTLAVGCYCPWTPEKG
>NZ_FRQN01000028.1|WP_021263264.1|284072_285092_-|alpha/beta-hydrolase
MCSRAAEYPWVSPVARPRIDCSPEPPMSEAFNPDYLRQHLRPLAAAEADTAVLAYQAYYGLDLRSRHPRLQARLGSMAVDGRRLAVQAWLLPEARGSLLLMHGYYDHMGLYRHVVDWALGMGFSVLACDLPGHGLSEGERASIRDFAEYQAVFEGLLGQAAELDLAAPWHLCGQSTGGAILLDYLLHGGERPELGETILLAPLVRPRAWGWSKLSYRLLSPFVDSIPRRFSENSSDPQFLDFLREHDPLQPRTLPTAWVGALTRWVPRIERAPRRALSPLVVQGESDETVDWRHGLKVLREKFDEPRILLLEEARHHLANESEGLRRRYFDFLSDALGA
>NZ_FRQN01000028.1|WP_023098346.1|283300_284053_+|hypothetical-protein
MRALLAFALLLVGLPALADPYQRLYQAAGWPDQRAHFSDALDAAQKRYQDKLPPALYQTLVDNSNRRFAPAEVDQRALNGLRENLPDSASPLNFFESPLGRKVVAAEVLATRRDQLLQHSNGLPRQTASEPRRALVKRLAQVLPAREAGAEVSLALAGVAADSLSQMLPGLPGLLGGGQTGQLLEGQRQRLVQQIGADLENTLLYVYRDLSDAELTQYVNFAESPSGRSYYQAALAALKAGLAVDQAVAH
>NZ_FRQN01000028.1|WP_023656933.1|282553_283252_-|2OG-Fe(II)-oxygenase
MGRYCRHAADRLSRHRGGTLQWTMHINVNHPLLHRIVDELVDQGWSHQSIFMPERLTTRLAEECRIRAVAGDLTPAAIGRGDGQVIREGIRGDLTQWLEPGESAACDEYLGVMDSLRQALNASLFLGLEDFECHFALYPPGAYYQKHVDRFRDDDARTVSAVLYLNDAWLPEHGGALRLHLPQRQVDIQPTGGSLVVFMSAGTEHEVLPASRDRLSLTGWFRRRNESLLQLS
>NZ_FRQN01000028.1|WP_073665450.1|281977_282532_+|hypothetical-protein
MLPTHSLLPFFLAPALLASAASQAAMEALDNDSLSQVTGQAGISLRLDLRAGAARVAWVDDGGSLSLRNLVIDNGCVKAGDCPDGRGGNIPLGAAQLGLSLPIFGVEQPTLALDVTTGSGGGQQLAISLPDLATINDQLIASGLPAQRIRLRVASDLYIGDNSIGRIELRDITDLRGTIKVWGH
>NZ_FRQN01000028.1|WP_003084333.1|281217_281712_-|DUF523-domain-containing-protein
MQKVLVSRCLLGHLVRYDGGSHGPFDLLSRWHAQGRIVALCPEVAGGLPTPRPPAEIPGGQGGEVLDRLNRVFTVDGEDVSEAFLLGAEAAVELVRRHDIRMAVLKARSPSCGNLENYDGRFNGSRVAGEGVTAAALKRMGVLVFNEDELDRAAVCLAGLDAGG
>NZ_FRQN01000028.1|WP_003084339.1|280520_281213_+|amino-acid-ABC-transporter-permease
MNSLQKLLEWLANLVELLGMAWPFLLQGAMYTVLFAAVSMVLGLILGFSVAVVRVTKVPVVSQIAAVYVSAFRGTPLLVQIFVLYYGLPSVGIEFTPVTAGILALTLNVAAYLSESMRGAILGIDKGQWEAGLSVGLTWGQTLWNIITPQALRLAVPSLSNSLISLIKDTSLISVITVTELMLATKEVIAETFQPLPLYLAAAGIYWLLSALFERVQKALENRLTAPLRR
>NZ_FRQN01000028.1|WP_003084303.1|291876_293031_-|polyamine-ABC-transporter-ATP-binding-protein
MAIASGAYKKALEGNQQPKEVLVKIDRVTKQFDETLAVDTVSLTINKGEIFALLGGSGSGKSTLLRMLAGFERPTEGRIFLDGQDITDLPPYERPINMMFQSYALFPHMSVAQNIAFGLKQDGLPKAEIDERVAEMLKLVHMTQYAKRKPHQLSGGQRQRVALARSLAKRPKLLLLDEPMGALDKKLRSQMQLELVEIIERVGVTCVMVTHDQEEAMTMAQRIAIMHLGCIEQIGSPMDIYETPASRLVCEFIGNVNLFDGVLVEDVQDHAVIACPQLENPIYIGHGISTRAEDKRITYALRPEKVMISAQKPDNLEHAGHNWAQGTVYDIAYLGGHSVYYIKLASGMIVQAFMANAERHVARPTWDQSVYISWYDDSGVVLQS
>NZ_FRQN01000028.1|WP_003084301.1|293085_294183_-|polyamine-ABC-transporter-substrate-binding-protein
MQHSIGKTLLVAALATAIAGPVQAEKKSLHIYNWTDYIAPTTLKDFTKESGIDVSYDVFDSNETLEGKLVSGHSGYDIVVPSNNFLGKQIQAGAFQKLDKSKLPNWKNLDPALLKQLEVSDPGNQYAVPYLWGTNGIGYNVAKVKEVLGDQPIDSWAILFEPENMKKLAKCGVAFMDSGDEMLPAALNYLGLDPNTHDPKDYKKAEEVLTKVRPYVSYFHSSKYISDLANGNICVAFGYSGDVFQAAARAEEAGKGIDIQYVIPKEGANLWFDLMAIPADAKAADNAYAFIDYLLRPEVIAKVSDYVGYANAIPGARPLMDKSVSDSEEVYPPQAVLDKLYVSAVLPAKVLRLQTRTWTRIKTGK
>NZ_FRQN01000028.1|WP_003084299.1|294601_295705_-|polyamine-ABC-transporter-substrate-binding-protein
MMKRFGKTLLALTLAGSVAGMAQAADNKVLHVYNWSDYIAPDTLEKFTKETGIKVVYDVYDSNEVLEAKLLAGKSGYDVVVPSNSFLAKQIKAGVYQKLDKSKLPNWKNLNKDLMHTLEVSDPGNEHAIPYMWGTIGIGYNPDKVKAAFGDNAPVDSWDLVFKPENIQKLKQCGVSFLDSPTEILPAALHYLGYKPDTDNPKELKAAEELFLKIRPYVTYFHSSKYISDLANGNICVAIGYSGDIYQAKSRAEEAKNKVTVKYNIPKEGAGSFFDMVAIPKDAENTEGALAFVNFLMKPEIMAEITDVVQFPNGNAAATPLVSEAIRNDPGIYPSEEVMKKLYTFPDLPAKTQRAMTRSWTKIKSGK
>NZ_FRQN01000028.1|WP_003084297.1|295820_297191_-|aspartate-aminotransferase-family-protein
MNSQITNAKTREWQALSRDHHLPPFTDYKQLNEKGARIITKAEGVYIWDSEGNKILDAMAGLWCVNVGYGREELVQAATRQMRELPFYNLFFQTAHPPVVELAKAIADVAPEGMNHVFFTGSGSEANDTVLRMVRHYWATKGQPQKKVVIGRWNGYHGSTVAGVSLGGMKALHEQGDFPIPGIVHIAQPYWYGEGGDMSPDEFGVWAAEQLEKKILEVGEENVAAFIAEPIQGAGGVIVPPDTYWPKIREILAKYDILFIADEVICGFGRTGEWFGSQYYGNAPDLMPIAKGLTSGYIPMGGVVVRDEIVEVLNQGGEFYHGFTYSGHPVAAAVALENIRILREEKIIEKVKAETAPYLQKRWQELADHPLVGEARGVGMVAALELVKNKKTRERFTDKGVGMLCREHCFRNGLIMRAVGDTMIISPPLVIDPSQIDELITLARKCLDQTAAAVLA
>NZ_FRQN01000028.1|WP_003084290.1|297256_298615_-|glutamine-synthetase
MTTKLDQLTSWLKERKITEVECLISDLTGIARGKISPTNKFIAEKGMRLPESVLLQTVTGDYVEDDIYYDLLDPADIDMVCRPDENAVFLVPWAIEPTAMVIHDTFDKLGNPIELSPRNILKRVLKMYADKGWRPIVAPEMEFYLTKRSDDPDYPLQAPVGRSGRQETGRQSFSIDAANEFDPLFEDMYDWCEAQGLDLDTLIHEEGTAQMEINFRHGDALDLADQILVFKRTMREAALKHNVAATFMAKPMTGEPGSAMHLHQSIVDVKTGKNIFSNADGTMSELFLHHIGGLQKFIPEVLPLFAPNVNSFRRFLPDTSAPVNVEWGEENRTVGLRVPDSSPENRRVENRLAGADANPYLALAASLLCGYIGMVEGIKPSAQVKGRGYERRNLRLPLTIEAALERMENCKPLEQYLGSKFISGYVAVKRAEHENFKRVISSWEREFLLLSV
>NZ_FRQN01000028.1|WP_021263266.1|298655_299408_-|gamma-glutamyl-gamma-aminobutyrate-hydrolase-family-protein
MSRLPLIGVTACTKQIGLHPYHIAGDKYLRAVANGAGGLPLIIPALGESIDQAALLDSVDGLLFTGSPSNVEPRHYSGPASEPGTLHDSDRDATTLPLVRAAIDAGIPVLGICRGFQEMNVAFGGSLHQKVHEVGTFMDHREPADQPLEVQYAPRHAMHVQPGGVLAGIGLPSEFQVNSIHGQGVDRLAPGLRVEALAPDGLVEAISVEGAKAFALGVQWHPEWQVLTNPNYLAIFQAFGKACGKRAGQR
>NZ_FRQN01000028.1|WP_003112937.1|299686_301063_+|glutamine-synthetase
MSVPQRAVQLTEPSEFLKEHPEVQFVDLLIADMNGVVRGKRIERNSLNKVFEKGINLPASLFALDITGSTVESTGLGLDIGDADRICYPIPGTLSMEPWQKRPTAQLLMTMHELEGEPFFADPREVLRQVVARFTEMELTIVAAFELEFYLIDQENVNGRPQPPRSPISGKRPQSVQVYSIDDLDEYVECLQDIIDGARAQGIPADAIVAESAPAQFEVNLNHVNDALKACDHAVLLKRLVKNIAYDHEMDTTFMAKPYPGQAGNGLHVHISLLDKHGNNIFTSEDPEQNAALRHAIGGVLETLPASMAFLCPNVNSYRRFGSQFYVPNAPSWGLDNRTVALRVPTGSPDAVRLEHRVAGADANPYLLLAAVLAGVHHGLTNKVEPGAPIEGNSYEQMEPSLPNNLRDALRELDESEIMAKYIDPKYIDIFVACKESELEEFEHSISDLEYNWYLHTV
>NZ_FRQN01000028.1|WP_023100735.1|301318_302380_+|polyamine-ABC-transporter-substrate-binding-protein
MPRLSVLLFLALAPWLAQAEETLRVYNWNDYIDPQVLESFQKDTGIRVEYHTFATAEELDKALRSGEAIDVAVPSHDTLPALLKDNLLQPLDFTQLPNRSHLDRQLLSKLAAVDPDNRHAVPYLWGAVGLAINTPQAEAAYGGPLPNSWSLLFDASQSQRLKSCGISLLDAPDETLAILLNYQGRNLGRTAPSQVRRAAEALHGLRPNLRYVDSERYIADLEDGRLCLAMAWVGDALRAAKAGQPVSFEVPQEGSVLFIDNLVIPAGAQHPREAHRFIDYLMQPKIAAQITAATLYPSGNADAAGFLDPALRQQPGLYPDRDTSRRLFALETPPEKLRPVVDEIWKAFRGASH
>NZ_FRQN01000028.1|WP_003084271.1|302440_303106_+|TetR/AcrR-family-transcriptional-regulator
MQPTSSIRKPRASSQARIAAILDAARGLLADEGIGGLTIYSVAERAEMPPSSVYHFFPSVPALLQGLTGEVHAAFRACLEQPVDHAGLRCWRDLSRIVEERMLAVYARDAAARQLILASHGLAEVTQADRQHDVQLGQAMRALFERHFLLPPLPTDIEIFSLAMELGDRVYALSVQRHGIIDARLAEEGMRVFDAYLGLYLPPILEKRSEPLTGFISDLNR
>NZ_FRQN01000028.1|WP_003111119.1|303268_304147_+|N-carbamoylputrescine-amidase
MTRNVTVAATQMACSWDRPANIARAEKLVRQAAARGAQIILIQELFETPYFCQKPNPDYLQLATTVEENAAIAHFQALARELQVVLPISFFERAGRARFNSIAVIDADGGNLGVYRKSHIPDGPGYHEKYYFNPGDTGFKVWQTRYARIGVGICWDQWFPESARSMALLGAELLFYPTAIGSEPHDASISSRDHWQRVQQGHAGANLMPLVASNRIGREEQDGYDITFYGSSFIADPFGEKVEELNRTEEGILVHTFDLDALERTRSAWGVFRDRRPNLYGPLKTLDGSLES

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

9. NZ_FRQN01000033

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

92790 : 148995

uncultured_Caudovirales_phage(29.55%)

tRNA,plate,head,tail,terminase,portal,holin,capsid

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003112602.1\|92790_95415_+\|tRNA	alanine--tRNA ligase	A0A1V0SK38	Klosneuvirus	2.4e-75	37.6
WP_003085971.1\|95562_96801_+	aspartate kinase	NA	NA	NA	NA
WP_003085981.1\|96985_97171_+	carbon storage regulator CsrA	A0A2I7RT00	Vibrio_phage	9.9e-13	68.6
WP_003085982.1\|97801_98515_-	helix-turn-helix transcriptional regulator	W6MVG5	Pseudomonas_phage	6.0e-58	51.3
WP_023101471.1\|98685_99216_+	hypothetical protein	NA	NA	NA	NA
WP_003085986.1\|99380_99755_+\|holin	phage holin family protein	H2BD73	Pseudomonas_phage	4.6e-25	51.9
WP_003085989.1\|99747_100023_+\|holin	phage holin family protein	A0A0U4J8T9	Pseudomonas_phage	6.4e-16	51.1
WP_021264331.1\|100114_100618_+	hypothetical protein	NA	NA	NA	NA
WP_021264332.1\|100670_101156_+	hypothetical protein	NA	NA	NA	NA
WP_003123233.1\|101201_101717_-	DUF4124 domain-containing protein	NA	NA	NA	NA
WP_003085996.1\|102043_103492_+	magnesium transporter	NA	NA	NA	NA
WP_023099890.1\|103571_103934_-	hypothetical protein	NA	NA	NA	NA
WP_003085999.1\|103926_104388_-	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	1.0e-34	48.7
WP_019725859.1\|104449_105784_-	30S ribosomal protein S12 methylthiotransferase RimO	NA	NA	NA	NA
WP_031691645.1\|105812_107444_+	recombinase family protein	Q3HQV4	Burkholderia_phage	1.3e-156	55.7
WP_049950076.1\|107427_107712_-	hypothetical protein	NA	NA	NA	NA
WP_031691642.1\|107823_108708_-	hypothetical protein	H2BDF1	Pseudomonas_virus	6.0e-15	43.0
WP_078451168.1\|108704_109772_-	phosphoadenosine phosphosulfate reductase family protein	Q8W6P3	Burkholderia_virus	1.8e-77	47.8
WP_031691639.1\|109768_110152_-	hypothetical protein	NA	NA	NA	NA
WP_049950075.1\|110148_112029_-	DNA cytosine methyltransferase	Q5QF27	Pseudomonas_virus	4.4e-132	43.2
WP_031691637.1\|112025_112508_-	hypothetical protein	NA	NA	NA	NA
WP_049950074.1\|112504_113065_-	Lar family restriction alleviation protein	O64348	Escherichia_phage	4.3e-11	36.2
WP_019726491.1\|113073_113313_-	hypothetical protein	NA	NA	NA	NA
WP_031691636.1\|113309_113873_-	hypothetical protein	NA	NA	NA	NA
WP_031691635.1\|113923_114241_-	pyocin activator PrtN family protein	NA	NA	NA	NA
WP_031691634.1\|114237_114558_-	hypothetical protein	NA	NA	NA	NA
WP_019727252.1\|114711_115005_-	phage antirepressor KilAC domain-containing protein	NA	NA	NA	NA
WP_031691633.1\|115014_115326_-	hypothetical protein	NA	NA	NA	NA
WP_078451169.1\|115657_116398_-	helix-turn-helix transcriptional regulator	A0A1B0Z078	Pseudomonas_phage	2.1e-53	63.3
WP_071537145.1\|116541_116796_+	hypothetical protein	NA	NA	NA	NA
WP_019726483.1\|117127_117682_+	hypothetical protein	NA	NA	NA	NA
WP_073665487.1\|117674_117884_+	TraR/DksA C4-type zinc finger protein	A0A0M3LQ09	Mannheimia_phage	4.1e-07	49.3
WP_044261403.1\|117847_120094_+	toprim domain-containing protein	A0A2D1GN57	Marinobacter_phage	4.7e-189	47.0
WP_031691629.1\|120090_120462_+	hypothetical protein	NA	NA	NA	NA
WP_014603903.1\|121034_121397_+	hypothetical protein	A0A2H4J893	uncultured_Caudovirales_phage	8.4e-16	43.9
WP_031691628.1\|121512_122037_+\|terminase	terminase small subunit	A0A2D1GMW4	Marinobacter_phage	5.9e-18	36.5
WP_049950077.1\|122080_123967_+\|terminase	phage terminase large subunit family protein	A0A2D1GMT1	Marinobacter_phage	1.6e-161	50.0
WP_014603900.1\|123979_124195_+	hypothetical protein	NA	NA	NA	NA
WP_031691626.1\|124197_125811_+\|portal	phage portal protein	A0A067ZJA4	Vibrio_phage	7.2e-91	39.6
WP_031691625.1\|125813_127034_+	S49 family peptidase	A0A219YAK4	Aeromonas_phage	5.3e-46	34.7
WP_014603897.1\|127047_127398_+\|head	head decoration protein	A0A291AUM0	Sinorhizobium_phage	2.5e-12	42.2
WP_023127300.1\|127413_128451_+\|capsid	major capsid protein	A0A0C5ABI0	Bacteriophage	1.0e-69	40.8
WP_023127301.1\|128452_128638_+	hypothetical protein	NA	NA	NA	NA
WP_015649052.1\|128640_128955_+	hypothetical protein	A0A2H4J879	uncultured_Caudovirales_phage	2.1e-18	45.8
WP_031691624.1\|128954_129623_+	hypothetical protein	A0A2H4JBV1	uncultured_Caudovirales_phage	3.7e-65	59.3
WP_031691623.1\|129615_130152_+	hypothetical protein	A0A2H4J881	uncultured_Caudovirales_phage	3.0e-33	43.9
WP_031691622.1\|130148_130706_+\|plate	phage baseplate assembly protein V	A0A2H4JG06	uncultured_Caudovirales_phage	1.2e-48	69.1
WP_014603891.1\|130762_130984_+	hypothetical protein	NA	NA	NA	NA
WP_014603890.1\|130993_131320_+	GPW/gp25 family protein	A0A2H4JA09	uncultured_Caudovirales_phage	2.3e-33	65.7
WP_014603889.1\|131316_132201_+\|plate	baseplate J/gp47 family protein	A0A2H4JFK9	uncultured_Caudovirales_phage	7.4e-114	73.6
WP_031691621.1\|132197_132728_+\|tail	phage tail protein I	A0A2H4JDH5	uncultured_Caudovirales_phage	2.6e-50	56.9
WP_073665488.1\|132724_134806_+\|tail	phage tail protein	Q9ZXK6	Pseudomonas_virus	9.5e-112	50.3
WP_031691699.1\|134802_135267_+	hypothetical protein	Q9ZXK5	Pseudomonas_virus	6.1e-19	39.3
WP_023107128.1\|135310_136471_+\|tail	phage tail sheath family protein	Q38068	Phage_PS17	2.3e-216	98.2
WP_015649045.1\|136481_136991_+\|tail	phage major tail tube protein	Q7M2A5	Pseudomonas_phage	1.4e-88	100.0
WP_023107126.1\|137000_137297_+\|tail	phage tail assembly protein	A0A2H4J873	uncultured_Caudovirales_phage	1.1e-16	49.5
WP_031691697.1\|137435_140126_+\|tail	phage tail tape measure protein	A0A2H4JG00	uncultured_Caudovirales_phage	1.3e-41	28.9
WP_014603880.1\|140134_140974_+\|tail	phage tail protein	A0A2H4J875	uncultured_Caudovirales_phage	6.0e-81	54.3
WP_015649042.1\|140948_141155_+\|tail	tail protein X	A0A2H4J9Z9	uncultured_Caudovirales_phage	9.6e-17	62.7
WP_031691696.1\|141168_142221_+	phage late control protein	A0A2H4JBF6	uncultured_Caudovirales_phage	1.7e-133	70.1
WP_014603877.1\|142258_142444_-	hypothetical protein	NA	NA	NA	NA
WP_031691695.1\|142555_143185_+	glycoside hydrolase family 19 protein	J7I4M6	Pseudomonas_phage	3.5e-78	71.8
WP_031691694.1\|143181_143574_+	hypothetical protein	H2BDA0	Pseudomonas_phage	3.2e-45	83.6
WP_031691692.1\|143746_144049_-	hypothetical protein	NA	NA	NA	NA
WP_031691691.1\|144145_144409_+	hypothetical protein	A0A125RNP3	Pseudomonas_phage	5.0e-34	91.5
WP_031691690.1\|144444_144708_+	hypothetical protein	J7I447	Pseudomonas_phage	1.0e-42	94.3
WP_031691689.1\|144689_145376_-	SOS response-associated peptidase family protein	A0A2K8I970	Pseudomonas_phage	4.4e-122	89.5
WP_021264333.1\|146486_148391_+	potassium transporter Kup	A7J6G4	Paramecium_bursaria_Chlorella_virus	1.1e-74	32.6
WP_003086007.1\|148446_148995_-	cytochrome b	A0A0U2QLA7	Escherichia_phage	3.1e-22	46.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

10. NZ_FRQN01000015

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_FRQN01000015_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_FRQN01000015_1

72493-72587

Orphan

Consensus_repeat	Method
GGCGGGGGAGATGGGAAGTGCGATCCTGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_FRQN01000015_1

>merge|NZ_FRQN01000015|1|72493-72587|CRISPRCasFinder
GGCGGGGGAGATGGGAAGTGCGATCCTGCCAAGGATCCGAACAAGTGTCAGGGCAATGGCTCTGGTGGCGGGGGAGACGGGAAGTGCGATCCTGC

>NZ_FRQN01000015|1|1|72493-72587|CRISPRCasFinder
GGCGGGGGAGATGGGAAGTGCGATCCTGC	CAAGGATCCGAACAAGTGTCAGGGCAATGGCTCTGGT
GGCGGGGGAGACGGGAAGTGCGATCCTGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_FRQN01000015.1\|WP_034008248.1\|79738_80701_-\|glycosyl-hydrolase	unknown	unknown	gnl\|CDD\|226855
NZ_FRQN01000015.1\|WP_073665385.1\|63705_64617_-\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|224137
NZ_FRQN01000015.1\|WP_073665386.1\|66082_67519_-\|undecaprenyl-phosphate-glucose-phosphotransferase	unknown	unknown	gnl\|CDD\|274396
NZ_FRQN01000015.1\|WP_003089190.1\|78787_79654_+\|phytanoyl-CoA-dioxygenase-family-protein	unknown	unknown	gnl\|CDD\|368580
NZ_FRQN01000015.1\|WP_073665387.1\|76729_77272_+\|hypothetical-protein	unknown	unknown	unknown
NZ_FRQN01000015.1\|WP_003089225.1\|64616_66083_-\|mannose-1-phosphate-guanylyltransferase/mannose-6-phosphate-isomerase	unknown	unknown	gnl\|CDD\|273648
NZ_FRQN01000015.1\|WP_023099133.1\|71343_71574_+\|hypothetical-protein	unknown	unknown	unknown
NZ_FRQN01000015.1\|WP_178383516.1\|77294_78548_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|225306
NZ_FRQN01000015.1\|WP_023099592.1\|74884_75964_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|143587
NZ_FRQN01000015.1\|WP_023101275.1\|70726_71071_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|375186
NZ_FRQN01000015.1\|WP_023094735.1\|80711_83114_-\|MMPL-family-transporter	unknown	unknown	gnl\|CDD\|223964
NZ_FRQN01000015.1\|WP_023101277.1\|73435_74716_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|283385
NZ_FRQN01000015.1\|WP_034036459.1\|68761_69481_-\|MOSC-domain-containing-protein	unknown	unknown	gnl\|CDD\|225167
NZ_FRQN01000015.1\|WP_003089228.1\|60902_62891_-\|biofilm-formation-protein-PslE	unknown	unknown	gnl\|CDD\|225747
NZ_FRQN01000015.1\|WP_003089182.1\|84792_86217_-\|DUF1329-domain-containing-protein	unknown	unknown	gnl\|CDD\|377764
NZ_FRQN01000015.1\|WP_003144178.1\|83122_84709_-\|DUF1302-domain-containing-protein	unknown	unknown	gnl\|CDD\|377751
NZ_FRQN01000015.1\|WP_003122761.1\|68046_68718_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227105
NZ_FRQN01000015.1\|WP_003089227.1\|62905_63676_-\|polysaccharide-export-protein	unknown	unknown	gnl\|CDD\|224512
NZ_FRQN01000015.1\|WP_010792462.1\|73106_73418_+\|DUF2523-domain-containing-protein	unknown	unknown	gnl\|CDD\|371214
NZ_FRQN01000015.1\|WP_003089229.1\|59715_60903_-\|glycosyltransferase-family-4-protein	unknown	unknown	gnl\|CDD\|340849

Protein	Function_ID	Function_description	E-value
NZ_FRQN01000015.1\|WP_034008248.1\|79738_80701_-\|glycosyl-hydrolase	gnl\|CDD\|226855	COG4447, COG4447, Uncharacterized protein related to plant photosystem II stability/assembly factor [General function prediction only].	2.36272e-17
NZ_FRQN01000015.1\|WP_073665385.1\|63705_64617_-\|glycosyltransferase-family-2-protein	gnl\|CDD\|224137	COG1216, COG1216, Predicted glycosyltransferases [General function prediction only].	7.3104e-19
NZ_FRQN01000015.1\|WP_073665386.1\|66082_67519_-\|undecaprenyl-phosphate-glucose-phosphotransferase	gnl\|CDD\|274396	TIGR03023, Sugar_transferase., Undecaprenyl-phosphate glucose phosphotransferase. This family of proteins encompasses the E. coli WcaJ protein involved in colanic acid biosynthesis, the Methylobacillus EpsB protein involved in methanolan biosynthesis, as well as the GumD protein involved in the biosynthesis of xanthan. All of these are closely related to the well-characterized WbaP (formerly RfbP) protein, which is the first enzyme in O-antigen biosynthesis in Salmonella typhimurium. The enzyme transfers galactose from UDP-galactose (NOTE: not glucose) to a polyprenyl carrier (utilizing the highly conserved C-terminal sugar transferase domain, pfam02397) a reaction which takes place at the cytoplasmic face of the inner membrane. The N-terminal hydrophobic domain is then believed to facilitate the "flippase" function of transferring the liposaccharide unit from the cytoplasmic face to the periplasmic face of the inner membrane. Most of these genes are found within large operons dedicated to the production of complex exopolysaccharides such as the enterobacterial O-antigen. Colanic acid biosynthesis utilizes a glucose-undecaprenyl carrier, knockout of EpsB abolishes incorporation of UDP-glucose into the lipid phase, and the C-terminal portion of GumD has been shown to be responsible for the glucosyl-1-transferase activity.	1.91813e-167
NZ_FRQN01000015.1\|WP_003089190.1\|78787_79654_+\|phytanoyl-CoA-dioxygenase-family-protein	gnl\|CDD\|368580	pfam05721, PhyH, Phytanoyl-CoA dioxygenase (PhyH). This family is made up of several eukaryotic phytanoyl-CoA dioxygenase (PhyH) proteins, ectoine hydroxylases and a number of bacterial deoxygenases. PhyH is a peroxisomal enzyme catalyzing the first step of phytanic acid alpha-oxidation. PhyH deficiency causes Refsum's disease (RD) which is an inherited neurological syndrome biochemically characterized by the accumulation of phytanic acid in plasma and tissues.	7.70325e-44
NZ_FRQN01000015.1\|WP_003144178.1\|83122_84709_-\|DUF1302-domain-containing-protein	gnl\|CDD\|377751	pfam06980, DUF1302, Protein of unknown function (DUF1302). This family contains a number of hypothetical bacterial proteins of unknown function that are approximately 600 residues long. Most family members seem to be from Pseudomonas.	7.84574e-169
NZ_FRQN01000015.1\|WP_003089225.1\|64616_66083_-\|mannose-1-phosphate-guanylyltransferase/mannose-6-phosphate-isomerase	gnl\|CDD\|273648	TIGR01479, Mannose-1-phosphate_guanylyltransferase, mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase. This enzyme is known to be bifunctional, as both mannose-6-phosphate isomerase (EC 5.3.1.8) (PMI) and mannose-1-phosphate guanylyltransferase (EC 2.7.7.22) in Pseudomonas aeruginosa, Xanthomonas campestris, and Gluconacetobacter xylinus. The literature on the enzyme from E. coli attributes mannose-6-phosphate isomerase activity to an adjacent gene, but the present sequence has not been shown to lack the activity. The PMI domain is C-terminal. [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides].	0
NZ_FRQN01000015.1\|WP_023099592.1\|74884_75964_+\|hypothetical-protein	gnl\|CDD\|143587	cd07197, nitrilase, Nitrilase superfamily, including nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes. This superfamily (also known as the C-N hydrolase superfamily) contains hydrolases that break carbon-nitrogen bonds; it includes nitrilases, cyanide dihydratases, aliphatic amidases, N-terminal amidases, beta-ureidopropionases, biotinidases, pantotheinase, N-carbamyl-D-amino acid amidohydrolases, the glutaminase domain of glutamine-dependent NAD+ synthetase, apolipoprotein N-acyltransferases, and N-carbamoylputrescine amidohydrolases, among others. These enzymes depend on a Glu-Lys-Cys catalytic triad, and work through a thiol acylenzyme intermediate. Members of this superfamily generally form homomeric complexes, the basic building block of which is a homodimer. These oligomers include dimers, tetramers, hexamers, octamers, tetradecamers, octadecamers, as well as variable length helical arrangements and homo-oligomeric spirals. These proteins have roles in vitamin and co-enzyme metabolism, in detoxifying small molecules, in the synthesis of signaling molecules, and in the post-translational modification of proteins. They are used industrially, as biocatalysts in the fine chemical and pharmaceutical industry, in cyanide remediation, and in the treatment of toxic effluent. This superfamily has been classified previously in the literature, based on global and structure-based sequence analysis, into thirteen different enzyme classes (referred to as 1-13). This hierarchy includes those thirteen classes and a few additional subfamilies. A putative distant relative, the plasmid-borne TraB family, has not been included in the hierarchy.	0.000305911
NZ_FRQN01000015.1\|WP_178383516.1\|77294_78548_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|225306	COG2508, COG2508, Regulator of polyketide synthase expression [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism].	3.65653e-25
NZ_FRQN01000015.1\|WP_023101275.1\|70726_71071_+\|hypothetical-protein	gnl\|CDD\|375186	pfam17426, Putative_G5P, Putative Gamma DNA binding protein G5P. This domain family is found in Gammaproteobacterial proteins. Members of the family are predicted to be G5P DNA binding proteins. Homologous proteins are found in pfam02303.	0.00081908
NZ_FRQN01000015.1\|WP_023094735.1\|80711_83114_-\|MMPL-family-transporter	gnl\|CDD\|223964	COG1033, COG1033, Predicted exporters of the RND superfamily [General function prediction only].	1.46834e-72
NZ_FRQN01000015.1\|WP_023101277.1\|73435_74716_+\|hypothetical-protein	gnl\|CDD\|283385	pfam05707, Zot, Zonular occludens toxin (Zot). This family consists of bacterial and viral proteins which are very similar to the Zonular occludens toxin (Zot). Zot is elaborated by bacteriophages present in toxigenic strains of Vibrio cholerae. Zot is a single polypeptide chain of 44.8 kDa, with the ability to reversibly alter intestinal epithelial tight junctions, allowing the passage of macromolecules through mucosal barriers.	2.88442e-19
NZ_FRQN01000015.1\|WP_034036459.1\|68761_69481_-\|MOSC-domain-containing-protein	gnl\|CDD\|225167	COG2258, COG2258, Uncharacterized protein conserved in bacteria [Function unknown].	6.34619e-91
NZ_FRQN01000015.1\|WP_003089228.1\|60902_62891_-\|biofilm-formation-protein-PslE	gnl\|CDD\|225747	COG3206, GumC, Uncharacterized protein involved in exopolysaccharide biosynthesis [Cell envelope biogenesis, outer membrane].	1.48557e-63
NZ_FRQN01000015.1\|WP_003089182.1\|84792_86217_-\|DUF1329-domain-containing-protein	gnl\|CDD\|377764	pfam07044, DUF1329, Protein of unknown function (DUF1329). This family consists of several hypothetical bacterial proteins of around 475 residues in length. The majority of family members are from Pseudomonas species but the family also contains sequences from Shewanella oneidensis and Thauera aromatica.	1.37405e-153
NZ_FRQN01000015.1\|WP_003122761.1\|68046_68718_-\|hypothetical-protein	gnl\|CDD\|227105	COG4764, COG4764, Uncharacterized protein conserved in bacteria [Function unknown].	1.21054e-111
NZ_FRQN01000015.1\|WP_003089227.1\|62905_63676_-\|polysaccharide-export-protein	gnl\|CDD\|224512	COG1596, Wza, Periplasmic protein involved in polysaccharide export, contains SLBB domain of b-grasp fold [Cell wall/membrane/envelope biogenesis].	1.9756e-41
NZ_FRQN01000015.1\|WP_010792462.1\|73106_73418_+\|DUF2523-domain-containing-protein	gnl\|CDD\|371214	pfam10734, DUF2523, Protein of unknown function (DUF2523). This is a family of phage related proteins whose function is uncharacterized.	1.55355e-11
NZ_FRQN01000015.1\|WP_003089229.1\|59715_60903_-\|glycosyltransferase-family-4-protein	gnl\|CDD\|340849	cd03822, GT4_mannosyltransferase-like, mannosyltransferases of glycosyltransferase family 4 and similar proteins. This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.	4.89818e-106

>NZ_FRQN01000015.1|WP_023099133.1|71343_71574_+|hypothetical-protein
MKQLKQLFSLGKREAVIGGSLLMASGLSMAAEGDIDTTKALAYIAGGLAAAAAVTGAMFGLVALIGAAKKAMRAGT
>NZ_FRQN01000015.1|WP_023101275.1|70726_71071_+|hypothetical-protein
MLALIGLCQGYYPETRTINGQNGQTQITEHYVLVQVEHSTKFGISENKVIQVRISKRHMDGGLNNVWKMEKGKTVSVPVFIQAWASKSGNAGFDYWLSGDGMPLKLQAVQEKAA
>NZ_FRQN01000015.1|WP_034036459.1|68761_69481_-|MOSC-domain-containing-protein
MPLPALPLDALLTGRARPFTRPGSRSGIVKSPRDGALRVTPVGLEGDEQGDLRVHGGVEKAIHHYPREHYAAWIAELGEHPLLMQAGAFGENFSTSGWSEADVCLGDRVRAGTALLEVSQGRMPCWKLNDRFEVAGMSLRVQESGRTGWYYRVLEEGVVAAGDILQLVERRHPDWSLLRLSEVLFDRRADAELLRQCLALPLTPSWRRTLERRLEKGQVEDWEPRLEGAPSQAETPRPT
>NZ_FRQN01000015.1|WP_003122761.1|68046_68718_-|hypothetical-protein
MHGVPESGYKAPALSDPDVCQRTPFMLRLSMPALLLALAGCATKPPANPDNLCEIFREKPKWHEAALKMQQRWGAPVQVPMAMMYQESSFKHDALPPRYYFLGFIPWGRVSSAYGYAQAKDETWADYKREAGGWGASRDDFADALDFMGWYIQKSQRVNGVSKWDAYGQYLNYHEGWGGYRNRSYDAKPWLKNVSQKVQSRASLFGAQYRSCQQELSRGGWFW
>NZ_FRQN01000015.1|WP_073665386.1|66082_67519_-|undecaprenyl-phosphate-glucose-phosphotransferase
MHSKSVDSLSLTRAGFIEYFLVATKLVHALTAIAPALFLLYYPGLVPVELRSNMLGLLLFFGALTVIMFQALDVYSDDIFSNRLRFRIMFFAWASAFCLLLFMYQGLGLFPYLSSKLVIFWFTGSLLLFGVQRLLVLRLYRAWMKRGMYLQRTVILGFTESGMHLAEYLVRNHDIRSGIIGFIDDRSERVPENYNSLPLLGNTKDLEKLIRQEQVDQVLVALPWFAEGRIGAIVHRLRQLPVNVLLVPDMAAFRHAHNRIVDVSGIPMFNASELPLRGWSPLIKRCEDLVLASIALVLFAPLMALVALAIRFDSKGPVLFRQKRYGYNNRLIWVFKFRSMYTERTDANAERQTTRDDDRITRVGRFIRKTSIDELPQLFNVLAGSMSMVGPRPHATATKAAGIPFEEAVSEYSSRHRVKPGITGWAQINGYRGETDTLHKIKKRVEYDLEYIAKWSVWFDLYILFRTVPAVLLTKEVY
>NZ_FRQN01000015.1|WP_003089225.1|64616_66083_-|mannose-1-phosphate-guanylyltransferase/mannose-6-phosphate-isomerase
MNAVAPLIPCIVSGGSGTRLWPVSRESMPKPFMRLADDQSLLQKTFLRIAGLPDVARLLTVTNRDLLFRTLDDYRAVNRSGLAQDLLLEPVGRNTAPAIAAAALHVQEHFGDQAQLLILPADHLIRDEQAFAAAVAEARELAAQGYLVTFGITPERAETGFGYIEQGAPLGNGFRVARFVEKPDQATAQSYLDSGKYLWNAGMFCFQAATVLQELERHAPEVLIAARAALADGSSLENGQCRQRELAAGAFAEAPDISVDYALMERSDKVAVVPCSIGWSDIGSWQALRELSAADENGNQVRGESVLHDVSNCYIDSPKRLVGAVGVHDLIIVDTPDALLVADAARSQDVKFVAQELKRRGHDAFRLHRTVSRPWGTYTVLEEGRRFKIKRIVVRPKASLSLQMHHHRSEHWIVVSGMALVENGEREFLLNTNESTFIPAGHSHRLSNPGIIDLVMIEVQSGEYLGEDDIVRFNDIYGRAPASDEKKA
>NZ_FRQN01000015.1|WP_073665385.1|63705_64617_-|glycosyltransferase-family-2-protein
MRCALVIPTRNAGAHLDRLLPALAAQRRQPDSILVVDSRSSDDTVERFRAFGARVEVIEPASFNHGGTRRWASQQVEADALIYLTQDAIPASPDSFANLLDELYAEADIGVAYGRQLPHPGAGLLGAQARRFNYPPESRSKRLADASELGIKTCFSSDSFSAYRSDALAAVGGFPEDVIGSEDAYVAARLLQAGYAVRYAASAEVYHSHDYRLLEEFRRYFDIGVFYGRERWIRAAFGGAGGEGKRYVLAEIQALRAAGALYRVPEIALRSTFKLLGYRLGQLERHLPVALKRRISMFPGYWK
>NZ_FRQN01000015.1|WP_003089227.1|62905_63676_-|polysaccharide-export-protein
MKRTLLMLAMLALAACNTPARIPAPDSDTVDSGKRALEELARLPPAMERVRVGDTLRIVRDAGEMPTLSAFNVATIYELTLYTVLNDGSIYYPFIGRIQAAHRTPQEIANELTTKLAPIYREPRVTVNINQAPGNTVFVGGAVRNPSAVPIPAANNMEQAILGAGGILPVGDARRVALMREDSEGRYHAYFLDFSQLMKIGPEGRKPLAMQRGDIVFVPKSMVGDRIEGVDVYLNQLLPFAKSIGVGVSYTVNNDR
>NZ_FRQN01000015.1|WP_003089228.1|60902_62891_-|biofilm-formation-protein-PslE
MIEIRSLRDLLRLLFIYQREFKLAALSAVVIIVLGAFLLPAKYESNARLLVKPGRDSTLPIEISNRQALVMPSTQRDPIVDEERLLTGRPIVRQVAERYLEVLANRPPPEGLWKRTKFYVKKAIGAVFDGIRVTLETFGVIEETTAVERLAKDLEKKFEVTHAAGSTVMEISFTWSEPEVAQEVVKAWIEIYMEERTQALGRKSLYAFYEAQTADSAAQIKSYKAQILKHLNEIGASSIEDRLQDLSERINVLRGERFNSIRLIASSDSALESTRQQLKGLPREIVTVRQIALNPAQQDLRRLLNQKRLERADMMRTYTDDAPPVKALDASIRALEKEVQDEGATVQSSEDRAPNTLTTHLERVLLDETSNNAALRTQLAEQEKQLAELEAQRREALDIEPTLARLQRELNATERNYALYVDSLEKSRIDRELDKSQISNISVIEEATYNPGRIFPKTLLMLFLAVPFGLAVGLLVVYLCYLLDQRIHDGGLVEEKFGLPLWTTLPELSNSTAESSNAFTASIYRLYGLLPYARIEEKGLTLGLTSARHGEGVTFIIEQLRRLLEENGVRVRVGGEPAQPGEVVLLDAPALLDSREAFIALRRADLIALVVEAQKSTVPVVEHALTILTTAFGKVDGIIINRRRFEVPSKVLQTIARYRSAF
>NZ_FRQN01000015.1|WP_003089229.1|59715_60903_-|glycosyltransferase-family-4-protein
MRIALLAPLPPEKNGIADYASHFRNALQGLGIEVATPLAGVAADSANIASRLDSVDWNAFDLVHAELGGGRLGEFIALRELRKRFPRLPLSATVHDPERMVWRRERLPWPLNLLERLPSPLPQAAVVLADPLTLREERAVAQGLTRLVTLTGLGGECLARRMRLPPGRVEVINHGNLEIATVPLPSLDTLRLLYFGFIYRGKGIEDLLEALADLFASAPEMRQRVRLTLAGGTAAEMAFGAGGNYLDQLKAQIAELGLADAIDWNLNLAAADIPRTIQAHHVMVLPYRESKKLGLLGQQRGTSGALSWAAACGRGAITSDARAFAEEVASGNGAIYPQGDVAALSEQLLNLAREPRLAQAWAERAGAIGHARTWPRTALRFQALFNDMVGTVHGT
>NZ_FRQN01000015.1|WP_010792462.1|73106_73418_+|DUF2523-domain-containing-protein
MPLLIGVLLRAIGWSLIPLGWKLLRGLGFTAVAFVGVKAVMDQAKDYVFSSLGGVPAQWLQVLGLLQVDVCINILFSAYIARAVLWGMDKSGGKSGMRWTGPK
>NZ_FRQN01000015.1|WP_023101277.1|73435_74716_+|hypothetical-protein
MLYLRTGLPGAGKTLNAIREIDIEHQPDPDDPAKRLHKDPDNPDLPPRTIYYYGIPDMKLDRLKSKWVEFDTPEEWYNLPDGSVIVIDEAQRVFGNDGTRARPEKVTRFETHRHQGLDIHLITQHPSLLCTPVRKLVGKHINFIRPYGREKGIFRHEYEFCIDNPERRSNFKQAQEERVTLDKAYFGVYKSSTVHTHKPITPSYMKKIPLIIVLMLIPIGVLVGLVVTAMRQGNEEKEAALARSQATEASAGVLPGAGNAVQAAPRASSGAKSADEFIGDMSPRVPDLVASAPRYDDLNKPRDFPRPVCAASSDPNLIGKAPERRIPLGTYNGRVMVCQCYTQQVTRMHTTFEFCMDVVNNGYFDDTRMPPTYASGNSTRGLITSPSVDPATAIERGRAATSPTPGDAFSTRVTIVPDSSRMPRTL
>NZ_FRQN01000015.1|WP_023099592.1|74884_75964_+|hypothetical-protein
MPKLIVAIWSVNTKNHAATPDARFASLTVAIQSAWTTMMTLADGETVSYLGAQPHAITPQSVSVHTARNESVNYLFIAPEYLFTANKDIPSHFMTETQFELIRAQLVFLSLRFPNLMIIPGSAGWFKTRMRSAVKIFRKSLAQPQRERGPEASRDMNKYLERYQRSIDTPLDYRGVVPDLHLSSYTNQYKDLKYGQIYDLEQASPKSGQHAAGLKIAKNTCLVLKSATIIHRYDKIFEAQDSTDTDMSKADRQEPFLFMPGEASPIFESAGIKYGVELCVDHNFAALQVWCKKICHPPSPVDIQILMSASTGLESSNIAATQFVLHADCHGASVIKANGEDVSPARSAAEDLPVYVLEW
>NZ_FRQN01000015.1|WP_073665387.1|76729_77272_+|hypothetical-protein
MSPSPSPDERRLVFEARRLTIEALVKIYLEQVSSSRNLVTVYLRLMFTLSLGALAGVITLYGTMLRFGTSASISMITPLEVVLAIAALAALVTSALLSARALQKSAFDVAPLLHNPFPSADSVIDSIFDADDIDERQILRKLYFALDKTVEHQPPLRLSTHLITLFLIGGLFLTGASFLL
>NZ_FRQN01000015.1|WP_178383516.1|77294_78548_-|helix-turn-helix-domain-containing-protein
MTSTPSSWPRPSEAVRELMRKGAELAQALPPEWVERLNQALFSSPEDAKLLEDPVILAACRRANRAELLHWANANLQRPGEPVQPYVSADMVDTARELARRGLSELLMNVARSTQNTAWELWMKMAFNLTQDPRVLEEFLEVSSRSISEFIDSNMRVVTQIILEEKSAQAHDDPIDKRSLVSRLLDGRDVDTEQFGRRLGYSLFQKHYAGLVWCESPDAEIRLLEDVARTLAQLTGTAAPLIVFAGPATLWVWSHAAKPLDLNLLQGIALRFSGIRAAIGSPGTGVNGFRRSHLEALTTQRLMGRLAGAPAVATIDQVRMVSLMTQDDRAARQFVLSTLGRLATEPSVLQRSLHAFLANGCNVTQTAEALGTHRNTLLRRLERAQDLLPVRLADHRIQIAAALELVIWSTPLIDDDK
>NZ_FRQN01000015.1|WP_003089190.1|78787_79654_+|phytanoyl-CoA-dioxygenase-family-protein
MSASRDTFSLPVVTRSTPAQEIALLSDQAGAVIIRNFMTPEQVARINNELDAPLAALEAGSKHQHELIAEFHGRQTKRLTNLVTHSKTFREEILDDDLFHDLGNVLYAAECGDWWLTTAQLIEIGPGNKAQMLHRDMAQYQPFVAMNKHAPRTITNLMLALTDFTEENGATRLIPGSQDWDDFDDVGTPEMTIPALLKAGDAVLFGGKVVHGGGANVTADFYRRGLTIPMQASIITPEEAYPLIVPLELVRTLAPRVQKILGFRSQYPNGSPGLWQHNYADLADYLQL
>NZ_FRQN01000015.1|WP_034008248.1|79738_80701_-|glycosyl-hydrolase
MKFRVSLTAALLAAGLPLMSLQAAPLQAVPAVQAGNATQATMLAAGWAGERVVAVGDHGVVLLSDDQGRQWRQARSVPLSTPLTGVSFVDARHGWAVGHWGAILSTADGGESWQVQRLSSEEDRPLFAVHFFDARQGVAVGLWSLVLTTEDGGKAWTEQPLQAPPGAKRADLNLMGLFADNHGTLYATAEHGQVLRSDDQGKNWRYLDTGYEGTLWSGAVLADGRLLLGGQRGTLLQGSADGKAFRRVPTQGKGSVTSIAVAGARVLAVGLDGLKVRSRDGGNSFQEAPTADGLSLTAALFNADGTPLLFSRRGVMPRQE
>NZ_FRQN01000015.1|WP_023094735.1|80711_83114_-|MMPL-family-transporter
MNGSVKLPEAPTRGLLSYVEGVLFRHRRLVLASLAVFTLIMGWFAVQLRMDAGFEKQLPVGHEYIETFEAYRNDLLGANRLTIVVKAREGDIWSAPGLKRLYDVTQAVTFLPGVSRSSVRSLWTPNAFVNEITEEGFRADPLVPGTVSPEHLDDRIIAKIANSTAQGGFIGTLVSRDQSSAMITVELNEYDSQGAHLDYVAFNHRLEKEIRQRFEDGDFEIQIIGFAKQIGDIADGASAVLEFCLLALLLTAGAVYWYCHSLRFTLLALVCSLASLVWQFGSLRLLGYGLDPLAVLVPFLVFAIGVSHGVQQINFIVREIAIGKSAEEAARSSFTGLLVPGTLALVTALVSFVTLLLIPIPMVRELAITASLGVAYKIVTNLVMLPLMASLLRVDDKYAAAQEVSRQRRSRWLRGLARLAEPRKAQWVLGAALAVFLAAIWQSHDRVVGTLQAGAPELREDSRFNRDAVSIASNYDIGLDWLSVVFEVDKAPSEVACEDVALGQYQDRFVWAMQGVPGVLSVASFSTTMRQFNEGYNEGNPKMAAVPIDPMNYAALATEVARTPGLMRTDCSMSAVHLYLADHKATTINRVVDAAKAFRSEYPMSGISIRLASGNAGVLAAINEEVEKSETPMLLYVYAAIALLVFVVYRDLRAVLVCCLPLTIGTFIGYWFMKELQIGLTIATLPVMVLAVGIGVDYAFYIYNRLQLHLAHGQTITKAVEYALLEVGVATIFTAITLAVGVATWAFSELKFQADMGKLLAFMFIVNMVMAMTVLPAFAVWLERAFPRKRPVRMIGALVH
>NZ_FRQN01000015.1|WP_003144178.1|83122_84709_-|DUF1302-domain-containing-protein
MGFTFETETLNGSFDSTITAGMGLRTESRGCNLINQGPTGHNAPSGCLAQSSGVADQGDLNYDRGDMFTNYLKGTHELLLKMPEDITFMARGTWIRDFAATDTTGTLSFNTPESVGSNGLSDDARDDLAFKARLLDLWVSKGFDVGGQRVRARLGNQVINWGESLFVAGGINNTNAYDYQALARPGVQLKEAVLPAPMLSVASGLGSGVNVEAYYQFRWNKSELPPVGSYWSTTNALGEGRGDYGFSEKDARDSGQWGLSLRWQPEDSDVAYGFYVMRYHDKLPSLRVAILDPNTFAAAPTWEYQEDRMMYGISANMPIGDWAVGTELSYRPKDSVMLNPVIDLCTGNGGKCWKDEKKFQWHLTGLYSFTPSNSPTLLDFSGASTGSLLTELVVIKYPGLHDEVNGEPLAAGLNAWQLDPARAPKSRGDKTSSGINLDFSLTYDGTLLPGWQVTPGVFYARSLGGRTPNLSATFTEDASSMNLYLNFVRNPASWQISLNYAKFMGGETPYDQLYRDRDYVGIAISRTL
>NZ_FRQN01000015.1|WP_003089182.1|84792_86217_-|DUF1329-domain-containing-protein
MKDVTERLEGEAPTRRVFQQQLFMTLAVSTVLCSVQAAPQGPEALGSKLTPLGGEIAASASGDIPAWTQPGQQDEGWSYGQVRGEHWKFKGDKPLYSIDANNLAQHSSKLSPGQVELFKRIPGYRMDVYPTRRTCSAPDFVVENTRQNVGFAKLDAAGLALDEAHVPGIPFPMPSTGAEVMWNMKMRYRGVGVEIPRTISGISPRKGGEWLRQSTDTFFFTPWGKKGSALFSSVGRLENATFFNYLEPAALAGQSAVQTAVAGEQATTFYYFPGQRRVRRMPSYSYDAPQIGLDNQYTVDEANVFFGTMDRFDWKLIGKQELLVPYNDFGAYDTGAKVETFAGNDSIAPQSRRYELHRVWVVEANVRQGMRHQAPKRMFYIDEDSWNPLLAVDYDKQGQIWKVREGFSIPVYETGACDVQAQVQYNLADGRYLFDMTSIGAGKNDIRWLTEDNGSPRLKRDFFTSDNLRAISER

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

11. NZ_FRQN01000010

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

12645 : 68302

Pseudomonas_phage(24.14%)

plate,tRNA,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003109020.1\|12645_13671_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	3.7e-109	58.1
WP_003085061.1\|13749_14319_-	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA
WP_003099587.1\|14402_14756_+	dihydroneopterin aldolase	NA	NA	NA	NA
WP_003137363.1\|14746_15289_+	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA
WP_003117955.1\|15261_16494_-	multifunctional CCA addition/repair protein	A0A076G5T8	Escherichia_phage	2.0e-77	43.3
WP_003085071.1\|16537_17044_-	DUF4136 domain-containing protein	NA	NA	NA	NA
WP_003085073.1\|17138_18692_-	SpoVR family protein	NA	NA	NA	NA
WP_003099579.1\|18688_19960_-	YeaH/YhbH family protein	M4HNE2	Bacillus_phage	8.7e-07	34.2
WP_003085078.1\|20060_21983_-	PrkA family serine protein kinase	NA	NA	NA	NA
WP_003099577.1\|22261_22594_-	thiosulfate sulfurtransferase GlpE	NA	NA	NA	NA
WP_003113213.1\|22637_23489_-	symmetrical bis(5'-nucleosyl)-tetraphosphatase	K7P6H8	Enterobacteria_phage	4.9e-06	44.6
WP_021263064.1\|23488_23869_-	Co2+/Mg2+ efflux protein ApaG	NA	NA	NA	NA
WP_003099569.1\|23905_24712_-	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	NA	NA	NA	NA
WP_021263063.1\|24827_25814_-	4-hydroxythreonine-4-phosphate dehydrogenase PdxA	NA	NA	NA	NA
WP_003109024.1\|25810_27103_-	peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA
WP_023100781.1\|27083_29885_-	LPS-assembly protein LptD	NA	NA	NA	NA
WP_003109031.1\|30017_31730_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	8.0e-282	82.1
WP_003137370.1\|33002_34019_+	phosphotransferase	NA	NA	NA	NA
WP_003085095.1\|34015_34690_+	nucleotidyltransferase family protein	NA	NA	NA	NA
WP_003085097.1\|34691_35450_+	DnaJ domain-containing protein	NA	NA	NA	NA
WP_021263061.1\|35450_36512_-	alpha/beta hydrolase family protein	NA	NA	NA	NA
WP_021263060.1\|36663_39057_+	sensor histidine kinase	NA	NA	NA	NA
WP_003085103.1\|39102_39735_+	response regulator transcription factor	NA	NA	NA	NA
WP_003085106.1\|39863_40898_+	polyamine ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_021263059.1\|41131_42241_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	7.8e-28	34.4
WP_003109043.1\|42296_43343_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_021263058.1\|43457_44705_+	ABC transporter permease	NA	NA	NA	NA
WP_003085119.1\|44810_45641_+	ABC transporter permease	NA	NA	NA	NA
WP_003085122.1\|45764_46439_+	ribulose-phosphate 3-epimerase	NA	NA	NA	NA
WP_003099532.1\|46438_47257_+	phosphoglycolate phosphatase	NA	NA	NA	NA
WP_021263057.1\|47329_48808_+	anthranilate synthase component I	S4VT78	Pandoravirus	6.9e-40	29.7
WP_003085128.1\|48994_49309_-	pyocin activator PrtN family protein	NA	NA	NA	NA
WP_003109047.1\|49408_50179_-	helix-turn-helix transcriptional regulator	A0A1B0Z078	Pseudomonas_phage	7.9e-72	59.0
WP_003085132.1\|50636_50837_+	repressor PtrB	Q9ZXI6	Pseudomonas_virus	3.6e-08	50.0
WP_003085135.1\|50884_51244_+	hypothetical protein	NA	NA	NA	NA
WP_003118908.1\|51606_52056_+	hypothetical protein	B5TK61	Pseudomonas_phage	5.0e-26	53.3
WP_021263056.1\|52077_52593_+	hypothetical protein	A0A2H4J881	uncultured_Caudovirales_phage	6.3e-33	43.4
WP_003121844.1\|52589_53147_+\|plate	phage baseplate assembly protein V	A0A2H4JG06	uncultured_Caudovirales_phage	6.0e-45	70.3
WP_003085143.1\|53299_53626_+	GPW/gp25 family protein	A0A2H4JA09	uncultured_Caudovirales_phage	3.2e-30	60.2
WP_003085151.1\|53622_54510_+	bacteriophage protein	S4TNY7	Salmonella_phage	5.3e-88	59.8
WP_003137385.1\|54502_55036_+\|tail	phage tail protein I	Q9ZXK7	Pseudomonas_virus	5.2e-62	64.6
WP_015502281.1\|55037_57146_+\|tail	phage tail protein	Q9ZXK6	Pseudomonas_virus	6.5e-225	52.3
WP_003085172.1\|57154_57595_+\|tail	tail fiber assembly protein	Q9ZXK5	Pseudomonas_virus	3.0e-31	51.0
WP_003109051.1\|57637_58798_+\|tail	phage tail sheath family protein	Q38068	Phage_PS17	2.7e-188	83.4
WP_003085175.1\|58810_59314_+\|tail	phage major tail tube protein	Q7M2A5	Pseudomonas_phage	8.0e-65	73.5
WP_003085178.1\|59328_59673_+\|tail	phage tail assembly protein	A0A2H4J873	uncultured_Caudovirales_phage	3.8e-18	46.7
WP_023100783.1\|59842_62080_+\|tail	phage tail length determinator protein	NA	NA	NA	NA
WP_003085182.1\|62089_62962_+\|tail	phage tail protein	A0A2H4J875	uncultured_Caudovirales_phage	3.9e-75	51.7
WP_003101635.1\|62936_63143_+\|tail	tail protein X	A0A2H4J9Z9	uncultured_Caudovirales_phage	2.3e-18	64.2
WP_021263054.1\|63200_64190_+	phage late control D family protein	A0A2H4JBF6	uncultured_Caudovirales_phage	3.7e-106	55.5
WP_023100784.1\|64222_64852_+	glycoside hydrolase family 19 protein	A0A125RNP1	Pseudomonas_phage	7.1e-87	78.5
WP_023100785.1\|64848_65211_+	hypothetical protein	H2BDA0	Pseudomonas_phage	7.1e-15	47.1
WP_003118919.1\|65207_65465_+	hypothetical protein	A0A125RNP3	Pseudomonas_phage	8.3e-18	64.6
WP_003117978.1\|65812_66418_+	aminodeoxychorismate/anthranilate synthase component II	A0A0P0IKJ1	Acinetobacter_phage	2.1e-75	66.3
WP_003085203.1\|66419_67469_+	anthranilate phosphoribosyltransferase	A0A0N7IRD9	Acinetobacter_phage	1.8e-111	57.8
WP_021263053.1\|67465_68302_+	indole-3-glycerol phosphate synthase TrpC	A0A0P0IR83	Acinetobacter_phage	1.6e-70	56.9

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

12. NZ_FRQN01000005

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 31765

uncultured_Caudovirales_phage(58.54%)

terminase,portal,capsid,plate,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_143178324.1\|0_231_-	helix-turn-helix domain-containing protein	A2I308	Vibrio_virus	1.8e-11	49.3
WP_033945700.1\|377_968_+	hypothetical protein	A0A2H4JDR2	uncultured_Caudovirales_phage	1.0e-58	58.0
WP_079867803.1\|969_1359_+	hypothetical protein	L7P7Y1	Pseudomonas_phage	9.4e-05	47.4
WP_073665315.1\|1563_2382_+	hypothetical protein	A0A2H4JGZ9	uncultured_Caudovirales_phage	3.2e-55	50.2
WP_073665316.1\|2392_2719_+	hypothetical protein	NA	NA	NA	NA
WP_073665317.1\|2721_3039_+	hypothetical protein	B0ZSJ1	Halomonas_phage	7.9e-18	47.0
WP_034031304.1\|3531_3774_+	hypothetical protein	NA	NA	NA	NA
WP_033945705.1\|3770_4322_+	lysozyme	A0A2H4JDS2	uncultured_Caudovirales_phage	2.0e-69	72.8
WP_073665319.1\|4318_4825_+	hypothetical protein	A0A2H4JAC5	uncultured_Caudovirales_phage	2.2e-30	61.7
WP_073665320.1\|4833_5406_+	hypothetical protein	A0A2H4JEZ6	uncultured_Caudovirales_phage	7.6e-19	44.3
WP_073665321.1\|5649_6222_+\|terminase	terminase small subunit	A0A2H4JHU7	uncultured_Caudovirales_phage	5.5e-62	71.9
WP_079867806.1\|6247_8206_+\|terminase	phage terminase large subunit family protein	A0A2H4JG09	uncultured_Caudovirales_phage	5.4e-274	72.4
WP_073665323.1\|8232_8748_+	hypothetical protein	A0A2H4JHB3	uncultured_Caudovirales_phage	1.3e-65	72.5
WP_079867804.1\|8751_10257_+\|portal	phage portal protein	A0A2H4JBW2	uncultured_Caudovirales_phage	2.9e-227	75.4
WP_073665325.1\|10228_12103_+\|capsid	phage major capsid protein	A0A2H4JBW9	uncultured_Caudovirales_phage	1.2e-219	61.0
WP_073665326.1\|12175_12610_+	hypothetical protein	A0A2H4JHB8	uncultured_Caudovirales_phage	2.2e-10	49.3
WP_073665327.1\|12606_12987_+	hypothetical protein	A0A2H4JBX1	uncultured_Caudovirales_phage	1.4e-40	63.5
WP_073665353.1\|13013_13493_+	hypothetical protein	A0A2H4JBX7	uncultured_Caudovirales_phage	6.2e-67	78.6
WP_073665328.1\|13473_14004_+	hypothetical protein	A0A2H4JEV5	uncultured_Caudovirales_phage	1.4e-64	68.2
WP_073665329.1\|14007_14619_+\|plate	phage baseplate assembly protein V	A0A2H4JBW8	uncultured_Caudovirales_phage	7.4e-73	66.8
WP_073665330.1\|14615_14948_+\|plate	phage baseplate protein	A0A2H4JI46	uncultured_Caudovirales_phage	5.3e-49	85.5
WP_073665331.1\|14944_15940_+\|plate	baseplate J/gp47 family protein	A0A2H4JC04	uncultured_Caudovirales_phage	1.2e-104	63.5
WP_073665332.1\|15936_16581_+\|tail	phage tail protein I	A0A2H4JDK0	uncultured_Caudovirales_phage	1.9e-42	59.6
WP_073665333.1\|16577_17108_+\|tail	phage tail protein	A2I2X8	Vibrio_virus	2.0e-50	64.5
WP_073665334.1\|17104_17452_+	hypothetical protein	B0ZSG2	Halomonas_phage	5.4e-28	54.0
WP_073665335.1\|17448_17760_+	hypothetical protein	Q6R4V9	Vibrio_virus	6.3e-12	43.9
WP_073665336.1\|17760_18423_+	hypothetical protein	K7R9K7	Vibrio_phage	2.0e-55	53.4
WP_073665337.1\|18426_19053_+	hypothetical protein	NA	NA	NA	NA
WP_073665338.1\|19063_19303_+\|tail	phage tail assembly chaperone	H2BCU0	Synechococcus_phage	3.9e-09	47.9
WP_073665339.1\|19381_20059_+	hypothetical protein	A0A2H4P873	Pseudomonas_phage	7.5e-34	41.7
WP_034031281.1\|20085_20286_+	hypothetical protein	NA	NA	NA	NA
WP_073665340.1\|20288_21455_+\|tail	phage tail protein	B0ZSG8	Halomonas_phage	6.7e-131	60.8
WP_034031279.1\|21454_21961_+\|tail	phage major tail tube protein	B0ZSG9	Halomonas_phage	3.4e-23	39.5
WP_073665341.1\|22024_22591_+\|tail	phage tail assembly protein	B0ZSH0	Halomonas_phage	9.7e-35	41.5
WP_073665342.1\|22719_25278_+\|tail	phage tail tape measure protein	V9IQL1	Stenotrophomonas_phage	2.8e-44	36.1
WP_033945725.1\|25277_25667_+\|tail	phage tail protein	A0A2H4JAC8	uncultured_Caudovirales_phage	5.3e-56	80.6
WP_033945726.1\|25653_25866_+\|tail	tail protein X	A0A2H4JGD9	uncultured_Caudovirales_phage	4.7e-27	82.9
WP_073665343.1\|25875_26895_+\|tail	phage tail protein	A0A2H4JH05	uncultured_Caudovirales_phage	3.3e-142	76.1
WP_073665344.1\|27031_27217_+	Com family DNA-binding transcriptional regulator	Q5ZQW8	Pseudomonas_phage	3.9e-09	53.8
WP_073665345.1\|27194_27932_+	site-specific DNA-methyltransferase	V9IQV5	Stenotrophomonas_phage	1.3e-95	70.5
WP_073665346.1\|27990_28356_-	hypothetical protein	A0A2H4JC52	uncultured_Caudovirales_phage	9.4e-31	61.5
WP_073665347.1\|28434_29088_-	3'-5' exonuclease	A2I2Z6	Vibrio_virus	1.6e-41	50.9
WP_073665348.1\|29106_30030_-	DNA cytosine methyltransferase	A0A142KB20	Gordonia_phage	1.6e-26	38.0
WP_162983845.1\|30013_30178_-	hypothetical protein	NA	NA	NA	NA
WP_073665349.1\|30174_30459_-	hypothetical protein	NA	NA	NA	NA
WP_152959924.1\|30458_30608_-	hypothetical protein	NA	NA	NA	NA
WP_143178325.1\|30674_30998_-	hypothetical protein	A0A2H4JEY1	uncultured_Caudovirales_phage	2.8e-23	59.8
WP_079867805.1\|30994_31765_-	AAA family ATPase	A0A2H4JGZ2	uncultured_Caudovirales_phage	3.9e-71	67.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

13. NZ_FRQN01000035

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

10229 : 46822

Pseudomonas_phage(88.46%)

protease,transposase,terminase,capsid,head

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_031654998.1\|10229_10952_-	helix-turn-helix transcriptional regulator	H6V8K6	Pseudomonas_phage	2.1e-130	98.8
WP_010791925.1\|11101_11446_+	helix-turn-helix domain-containing protein	A0A125RN89	Pseudomonas_phage	1.3e-58	100.0
WP_034017453.1\|11448_11883_+	hypothetical protein	H6V8K8	Pseudomonas_phage	8.7e-76	98.6
WP_034017455.1\|12205_12616_+	hypothetical protein	L7STG5	Pseudomonas_phage	7.0e-59	89.7
WP_023123548.1\|12608_14681_+\|transposase	Mu transposase C-terminal domain-containing protein	Q38013	Pseudomonas_phage	0.0e+00	99.6
WP_078463498.1\|14677_15448_+	ATP-binding protein	H1ZZC1	Pseudomonas_virus	2.9e-138	100.0
WP_073665502.1\|15444_16092_+	hypothetical protein	L7P7X8	Pseudomonas_phage	3.2e-122	99.1
WP_073665516.1\|16192_16606_+	hypothetical protein	A0A0A1IWY8	Pseudomonas_phage	2.8e-71	99.3
WP_023105785.1\|16568_16880_+	hypothetical protein	A0A1C6ZDI6	Pseudomonas_phage	6.9e-51	98.1
WP_004365124.1\|16896_17415_+	host-nuclease inhibitor Gam family protein	L7P7S4	Pseudomonas_phage	3.9e-91	100.0
WP_004365122.1\|17416_17794_+	hypothetical protein	L7P7X9	Pseudomonas_phage	5.1e-64	100.0
WP_004365119.1\|17795_18074_+	hypothetical protein	A0A125RNA1	Pseudomonas_phage	1.6e-46	100.0
WP_003094504.1\|18298_18580_+	hypothetical protein	A0A0A1IUY5	Pseudomonas_phage	9.3e-47	100.0
WP_003094506.1\|18581_18788_+	hypothetical protein	A0A0A1IWY9	Pseudomonas_phage	2.2e-29	100.0
WP_033961526.1\|18790_19060_+	hypothetical protein	L7P7S7	Pseudomonas_phage	5.4e-44	98.9
WP_023108326.1\|19130_19427_+	hypothetical protein	A0A0A1IX71	Pseudomonas_phage	7.1e-45	100.0
WP_003094519.1\|19423_19831_+	regulatory protein GemA	A0A0A1IUY7	Pseudomonas_phage	1.8e-70	100.0
WP_003137290.1\|19817_20267_+	membrane protein	A0A0A1IWZ1	Pseudomonas_phage	3.5e-80	100.0
WP_016068581.1\|20369_20717_+	hypothetical protein	A0A0A1IVZ8	Pseudomonas_phage	1.1e-57	100.0
WP_010791912.1\|20661_21132_+	hypothetical protein	I6PCA6	Pseudomonas_phage	1.8e-82	100.0
WP_003094530.1\|21131_21548_+	structural protein	A0A0A1IX72	Pseudomonas_phage	4.6e-74	100.0
WP_003094532.1\|21547_21790_+	hypothetical protein	A0A0A1IUY9	Pseudomonas_phage	1.5e-37	100.0
WP_031643715.1\|21786_22188_+	hypothetical protein	H1ZZD6	Pseudomonas_virus	7.5e-66	100.0
WP_003094538.1\|22298_22487_+	hypothetical protein	A0A0A1IVG3	Pseudomonas_phage	1.0e-25	100.0
WP_003094540.1\|22495_22996_+	DUF1804 family protein	A0A0A1IX73	Pseudomonas_phage	3.8e-83	100.0
WP_016068582.1\|22995_23247_+	hypothetical protein	L7P832	Pseudomonas_phage	5.4e-38	100.0
WP_073665503.1\|23482_25135_+\|terminase	phage terminase large subunit	A0A0A1IW02	Pseudomonas_phage	0.0e+00	99.5
WP_073665504.1\|25144_26725_+	DUF935 domain-containing protein	A0A0A1IVG5	Pseudomonas_phage	6.4e-302	99.8
WP_073665505.1\|26724_28011_+\|capsid	minor capsid protein	I6PBD2	Pseudomonas_phage	1.4e-243	99.3
WP_003137272.1\|28010_28478_+	phage virion morphogenesis protein	I6P9D4	Pseudomonas_phage	1.5e-81	100.0
WP_016068276.1\|28588_28825_+	anti-CRISPR protein AcrF1	A0A125RNC3	Pseudomonas_phage	5.1e-38	100.0
WP_016068277.1\|28796_29036_+	winged helix-turn-helix domain-containing protein	A0A125RNC4	Pseudomonas_phage	7.2e-40	100.0
WP_073665506.1\|29251_30349_+\|protease	phage protease	A0A125RNC5	Pseudomonas_phage	7.6e-201	99.7
WP_003094558.1\|30352_31267_+\|head	Mu-like prophage major head subunit gpT family protein	A0A0A1IWZ9	Pseudomonas_phage	1.2e-175	100.0
WP_023102213.1\|31334_31676_+	hypothetical protein	A0SMP4	Pseudomonas_virus	6.2e-53	96.5
WP_003094562.1\|31675_31843_+	hypothetical protein	L7P7P7	Pseudomonas_phage	3.1e-21	100.0
WP_073665507.1\|31839_32256_+	DUF1320 domain-containing protein	L7P7K2	Pseudomonas_phage	2.5e-72	99.3
WP_073665508.1\|32252_32726_+	hypothetical protein	A0A0A1IUZ7	Pseudomonas_phage	3.3e-84	99.4
WP_043516745.1\|32713_32899_+	hypothetical protein	A0A1C6ZDM1	Pseudomonas_phage	3.9e-25	98.4
WP_034065719.1\|32924_33698_+	hypothetical protein	A0A1C6ZDP0	Pseudomonas_phage	2.2e-138	98.8
WP_042180134.1\|33701_34199_+	hypothetical protein	A0A1C6ZDR0	Pseudomonas_phage	3.7e-78	99.3
WP_073665509.1\|34325_38030_+	tape measure protein	B7SE05	Pseudomonas_virus	0.0e+00	98.1
WP_073665510.1\|38036_38993_+	hypothetical protein	A0SMQ2	Pseudomonas_virus	1.0e-185	96.9
WP_073665511.1\|38994_39918_+	hypothetical protein	A0A0A7DJR0	Pseudomonas_phage	4.3e-181	97.1
WP_073665512.1\|39917_41621_+	hypothetical protein	Q6TM53	Pseudomonas_phage	0.0e+00	98.1
WP_023102216.1\|41610_42432_+	phage BR0599 family protein	A0A0A7DJU6	Pseudomonas_phage	8.5e-165	99.6
WP_003094581.1\|42440_42680_+	hypothetical protein	A0A0U5KN06	unidentified_phage	3.6e-39	100.0
WP_023102217.1\|42676_42895_+	hypothetical protein	A0A125RNE0	Pseudomonas_phage	9.8e-36	100.0
WP_060852831.1\|42884_45092_+	hypothetical protein	A0A0A7DJR2	Pseudomonas_phage	0.0e+00	98.8
WP_015972888.1\|45088_46240_+	hypothetical protein	Q6TM48	Pseudomonas_phage	6.9e-229	100.0
WP_073665513.1\|46236_46524_+	hypothetical protein	A0A125RNE3	Pseudomonas_phage	1.5e-44	98.9
WP_003121473.1\|46597_46822_+	hypothetical protein	A0A125RNE4	Pseudomonas_phage	5.5e-34	100.0

Anti-CRISPR protein detection

Acr_ID: NZ_FRQN01000035.1|WP_016068276.1|28588_28825_+|anti-CRISPR-protein-AcrF1

Click the colored protein region to show detailed information

Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_FRQN01000035.1|WP_016068276.1|28588_28825_+|anti-CRISPR-protein-AcrF1

28588_28825_+

78 aa aa

AcrIF1

hit_Aca_id	identity	query_coverage	hit_coverage
anti_CRISPR0001\|YP_007392342.1\|AcrIF1\|I-F\|Verified\|Pseudomonas-phage-JBD30	1.0	1	1.0

NZ_FRQN01000035.1_28796_29036_+

Protein_id	Hit_Aca_id	Identity	Query_coverage	Hit_coverage
NZ_FRQN01000035.1_28796_29036_+	YP_007392343.1	1.0	1	1.0

10229-46822

14. NZ_FRQN01000083

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

15816 : 54279

Planktothrix_phage(33.33%)

plate,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003122677.1\|15816_17100_-\|tail	pyoverdine-tailoring periplasmic protein PvdN	NA	NA	NA	NA
WP_003103610.1\|17122_18469_-\|tail	pyoverdine-tailoring dipeptidase-like protein PvdM	NA	NA	NA	NA
WP_021264821.1\|18684_20319_+	pyoverdine maturation tyrosinase PvdP	NA	NA	NA	NA
WP_019371757.1\|20367_21792_-	pyoverdine export/recycling transporter outer membrane subunit OmpQ	NA	NA	NA	NA
WP_003089549.1\|21797_23789_-	pyoverdine export/recycling transporter ATP-binding/permease subunit PvdT	G9BWD6	Planktothrix_phage	6.9e-35	39.3
WP_003089547.1\|23788_24964_-	pyoverdine export/recycling transporter periplasmic adaptor subunit PvdR	NA	NA	NA	NA
WP_021264820.1\|25064_26060_-	FecR family protein	NA	NA	NA	NA
WP_003103620.1\|26223_26703_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_003114509.1\|26835_28167_+	L-ornithine N(5)-monooxygenase	NA	NA	NA	NA
WP_023101245.1\|28289_30578_+	acylase	NA	NA	NA	NA
WP_003089535.1\|30757_31081_+	transcriptional repressor	NA	NA	NA	NA
WP_003114511.1\|31122_32043_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_003104946.1\|32139_33291_+	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA
WP_003089526.1\|33357_33600_-	DUF1654 domain-containing protein	NA	NA	NA	NA
WP_003104944.1\|33894_34131_+	hypothetical protein	NA	NA	NA	NA
WP_003089521.1\|34397_34868_+	(2Fe-2S)-binding protein	NA	NA	NA	NA
WP_021264818.1\|34864_37180_+	xanthine dehydrogenase family protein molybdopterin-binding subunit	NA	NA	NA	NA
WP_178383529.1\|37596_38802_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_003131531.1\|39002_39644_-	response regulator transcription factor	NA	NA	NA	NA
WP_021264815.1\|39920_40316_+	DUF4280 domain-containing protein	NA	NA	NA	NA
WP_003131532.1\|40338_40875_-	toxin-antitoxin system YwqK family antitoxin	NA	NA	NA	NA
WP_021264814.1\|40885_42892_-	type VI secretion system tip protein VgrG	A0A077K8Q4	Ralstonia_phage	7.7e-42	29.5
WP_003122693.1\|43240_43813_-	hypothetical protein	NA	NA	NA	NA
WP_023101247.1\|43834_46384_-	type VI secretion system ATPase TssH	A0A223W0B1	Agrobacterium_phage	2.9e-78	30.0
WP_015502887.1\|46385_47402_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_003089497.1\|47365_49159_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_003089496.1\|49142_49568_-\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_003089495.1\|49580_50078_-	type VI secretion system tube protein Hcp	NA	NA	NA	NA
WP_003089494.1\|50151_51636_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_003089493.1\|51658_52204_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_009316131.1\|52411_52888_+	hypothetical protein	NA	NA	NA	NA
WP_023095587.1\|52947_54279_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

15. NZ_FRQN01000021

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

73254 : 80917

uncultured_Caudovirales_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003094039.1\|73254_73938_-	response regulator transcription factor	W8CYM9	Bacillus_phage	3.7e-28	33.2
WP_021264168.1\|74154_74949_+	phosphatase PAP2 family protein	NA	NA	NA	NA
WP_003094048.1\|74891_75221_-	DUF190 domain-containing protein	A0A2H4J2R0	uncultured_Caudovirales_phage	2.2e-23	47.6
WP_003094051.1\|75240_75624_-	fluoride efflux transporter CrcB	A0A2H4J148	uncultured_Caudovirales_phage	2.7e-36	69.9
WP_021264167.1\|75853_76540_+	hypothetical protein	NA	NA	NA	NA
WP_003094059.1\|76596_78240_-	chaperonin GroEL	A0A2I7SAK5	Vibrio_phage	2.2e-175	64.2
WP_003094064.1\|78290_78584_-	co-chaperone GroES	A0A221S4G8	uncultured_virus	7.5e-15	49.5
WP_073665407.1\|78779_79247_-	membrane protein FxsA	NA	NA	NA	NA
WP_021264166.1\|79315_80050_-	HugZ family protein	NA	NA	NA	NA
WP_003094072.1\|80158_80917_+	SDR family oxidoreductase	A0A0N9R355	Chrysochromulina_ericina_virus	7.7e-11	28.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage