CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP034655	Xanthomonas campestris pv. musacearum NCPPB 4379 chromosome, complete genome	3 crisprs	WYL,DEDDh,DinG,cas3,csa3,cas5,cas8c,cas7,cas4,cas1,cas2	0	12	9	0
CP034656	Xanthomonas campestris pv. musacearum NCPPB 4379 plasmid pXCM49, complete sequence	0 crisprs	NA	0	0	0	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP034655_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP034655_3

3691492-3691618

Orphan

Consensus_repeat	Method
GCGACCAGCCGGGCATGCCGAATCACCACAGCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP034655_3

>merge|CP034655|3|3691492-3691618|CRISPRCasFinder
GCGACCAGCCGGGCATGCCGAATCACCACAGCGCAGATGAGCCCCGTGATAGAAATTTCTACTGTCCGCTGCACTTCCGGACACAAAGGCGTGGCGACCAGCCGGAGCATGCCGAATCACCACAGCG

>CP034655|3|2|3691492-3691618|CRISPRCasFinder
GCGACCAGCCGGGCATGCCGAATCACCACAGCG	CAGATGAGCCCCGTGATAGAAATTTCTACTGTCCGCTGCACTTCCGGACACAAAGGCGTGG
CGACCAGCCGGAGCATGCCGAATCACCACAGCG

Protein	Signature genes	Signature genes Name	Protein_function
CP034655.1\|AZR31953.1\|3683060_3683615_-\|N-acetyltransferase	unknown	unknown	gnl\|CDD\|379112
CP034655.1\|AZR31951.1\|3680345_3681296_-\|5'-nucleotidase,-lipoprotein-e(P4)-family	unknown	unknown	gnl\|CDD\|319836
CP034655.1\|AZR31956.1\|3686975_3688220_+\|GAF-domain-containing-sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|223715
CP034655.1\|AZR31961.1\|3700321_3701740_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223810
CP034655.1\|AZR31960.1\|3698939_3700151_-\|tyrosine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235645
CP034655.1\|AZR31952.1\|3682716_3682920_-\|DUF4272-domain-containing-protein	unknown	unknown	gnl\|CDD\|379466
CP034655.1\|AZR31955.1\|3685887_3686517_+\|thymidine-kinase	unknown	unknown	gnl\|CDD\|235272
CP034655.1\|AZR33009.1\|3703584_3704805_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|341039
CP034655.1\|AZR31950.1\|3679617_3680349_-\|orotidine-5'-phosphate-decarboxylase	unknown	unknown	gnl\|CDD\|234695
CP034655.1\|AZR31949.1\|3677704_3679225_+\|tryptophan-7-halogenase	unknown	unknown	gnl\|CDD\|368139
CP034655.1\|AZR31954.1\|3683703_3685680_-\|DNA-helicase-Rep	unknown	unknown	gnl\|CDD\|130146
CP034655.1\|AZR31957.1\|3688386_3689988_-\|glucan-biosynthesis-protein-D	unknown	unknown	gnl\|CDD\|237327
CP034655.1\|AZR31958.1\|3690056_3691160_-\|DUF4380-domain-containing-protein	unknown	unknown	gnl\|CDD\|373010
CP034655.1\|AZR31962.1\|3702123_3703257_+\|anhydro-N-acetylmuramic-acid-kinase	unknown	unknown	gnl\|CDD\|236579
CP034655.1\|AZR31963.1\|3703298_3703526_-\|hypothetical-protein	unknown	unknown	unknown
CP034655.1\|AZR31959.1\|3691795_3692611_-\|bifunctional-DNA-formamidopyrimidine-glycosylase/DNA-(apurinic-or-apyrimidinic-site)-lyase	unknown	unknown	gnl\|CDD\|234899
CP034655.1\|AZR31966.1\|3706824_3707484_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|172537
CP034655.1\|AZR31967.1\|3707599_3708397_+\|ParA-family-protein	unknown	unknown	gnl\|CDD\|379293
CP034655.1\|AZR31964.1\|3705199_3706000_-\|exodeoxyribonuclease-III	unknown	unknown	gnl\|CDD\|197336
CP034655.1\|AZR31965.1\|3706121_3706781_+\|orotate-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|234771

Protein	Function_ID	Function_description	E-value
CP034655.1\|AZR31953.1\|3683060_3683615_-\|N-acetyltransferase	gnl\|CDD\|379112	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	1.84518e-30
CP034655.1\|AZR31951.1\|3680345_3681296_-\|5'-nucleotidase,-lipoprotein-e(P4)-family	gnl\|CDD\|319836	cd07534, HAD_CAP, molecular class C acid phosphatases, similar to Haemophilus influenzae e (P4) acid phosphatase; belongs to the haloacid dehalogenase-like hydrolase superfamily. Molecular class C acid phosphatases (CAPs) are nonspecific acid phosphatases with generally broad substrate specificity and optimum activity at neutral to acidic pH. Members include Haemophilus influenzae lipoprotein e (P4), Elizabethkingia meningosepticum OlpA, Helicobacter pylori HppA, Enterobacter sp. 4 acid phosphatase PhoI, and Streptococcus pyogenes M1 GAS LppC. Lipoprotein e (P4) exhibits phosphomonoesterase activity with aryl phosphate substrates including nicotinamide mononucleotide (NMN), tyrosine phosphate, phenyl phosphate, p-nitrophenyl phosphate, and 4-methylumbelliferyl phosphate. The role of P4 in NAD+ uptake appears to be the dephosphorylation of NMN to nicotinamide riboside, which is then taken up by the organism. Elizabethkingia meningosepticum OlpA is a broad-spectrum nucleotidase with preference for 5'-nucleotides, it efficiently hydrolyzes nucleotide monophosphates, with a strong preference for 5'-nucleotides and for 3'-AMP; OlpA can also hydrolyze sugar phosphates and beta-glycerol phosphate, although with a lower efficiency. Helicobacter pylori HppA is also a 5' nucleotidase. Members of this family belong to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	5.74689e-89
CP034655.1\|AZR31956.1\|3686975_3688220_+\|GAF-domain-containing-sensor-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	2.80005e-22
CP034655.1\|AZR31961.1\|3700321_3701740_+\|hypothetical-protein	gnl\|CDD\|223810	COG0739, NlpD, Membrane proteins related to metalloendopeptidases [Cell envelope biogenesis, outer membrane].	6.00299e-51
CP034655.1\|AZR31960.1\|3698939_3700151_-\|tyrosine--tRNA-ligase	gnl\|CDD\|235645	PRK05912, PRK05912, tyrosyl-tRNA synthetase; Validated.	0
CP034655.1\|AZR31952.1\|3682716_3682920_-\|DUF4272-domain-containing-protein	gnl\|CDD\|379466	pfam14094, DUF4272, Domain of unknown function (DUF4272). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and eukaryotes. Proteins in this family are typically between 221 and 399 amino acids in length.	7.99938e-20
CP034655.1\|AZR31955.1\|3685887_3686517_+\|thymidine-kinase	gnl\|CDD\|235272	PRK04296, PRK04296, thymidine kinase; Provisional.	1.02288e-107
CP034655.1\|AZR33009.1\|3703584_3704805_-\|MFS-transporter	gnl\|CDD\|341039	cd17486, MFS_AmpG_like, AmpG and similar transporters of the Major Facilitator Superfamily. AmpG acts as an inner membrane permease in the beta-lactamase induction system and in peptidoglycan recycling. It transports meuropeptide from the periplasm into the cytosol in gram-negative bacteria, which is essential for the induction of the ampC encoding beta-lactamase. The AmpG family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	5.69914e-103
CP034655.1\|AZR31950.1\|3679617_3680349_-\|orotidine-5'-phosphate-decarboxylase	gnl\|CDD\|234695	PRK00230, PRK00230, orotidine-5'-phosphate decarboxylase.	3.42563e-108
CP034655.1\|AZR31949.1\|3677704_3679225_+\|tryptophan-7-halogenase	gnl\|CDD\|368139	pfam04820, Trp_halogenase, Tryptophan halogenase. Tryptophan halogenase catalyzes the chlorination of tryptophan to form 7-chlorotryptophan. This is the first step in the biosynthesis of pyrrolnitrin, an antibiotic with broad-spectrum anti-fungal activity. Tryptophan halogenase is NADH-dependent.	0
CP034655.1\|AZR31954.1\|3683703_3685680_-\|DNA-helicase-Rep	gnl\|CDD\|130146	TIGR01074, ATP-dependent_DNA_helicase_Rep, ATP-dependent DNA helicase Rep. Designed to identify rep members of the uvrD/rep subfamily. [DNA metabolism, DNA replication, recombination, and repair].	0
CP034655.1\|AZR31957.1\|3688386_3689988_-\|glucan-biosynthesis-protein-D	gnl\|CDD\|237327	PRK13273, mdoD, glucan biosynthesis protein D; Provisional.	0
CP034655.1\|AZR31958.1\|3690056_3691160_-\|DUF4380-domain-containing-protein	gnl\|CDD\|373010	pfam14315, DUF4380, Domain of unknown function (DUF4380). This family of proteins is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 288 and 372 amino acids in length. There are two completely conserved residues (G and E) that may be functionally important.	6.08048e-146
CP034655.1\|AZR31962.1\|3702123_3703257_+\|anhydro-N-acetylmuramic-acid-kinase	gnl\|CDD\|236579	PRK09585, anmK, anhydro-N-acetylmuramic acid kinase; Reviewed.	0
CP034655.1\|AZR31959.1\|3691795_3692611_-\|bifunctional-DNA-formamidopyrimidine-glycosylase/DNA-(apurinic-or-apyrimidinic-site)-lyase	gnl\|CDD\|234899	PRK01103, PRK01103, bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase.	1.63773e-159
CP034655.1\|AZR31966.1\|3706824_3707484_+\|hypothetical-protein	gnl\|CDD\|172537	PRK14045, PRK14045, 1-aminocyclopropane-1-carboxylate deaminase; Provisional.	0.00204391
CP034655.1\|AZR31967.1\|3707599_3708397_+\|ParA-family-protein	gnl\|CDD\|379293	pfam13614, AAA_31, AAA domain. This family includes a wide variety of AAA domains including some that have lost essential nucleotide binding residues in the P-loop.	4.3688e-90
CP034655.1\|AZR31964.1\|3705199_3706000_-\|exodeoxyribonuclease-III	gnl\|CDD\|197336	cd10281, Nape_like_AP-endo, Neisseria meningitides Nape-like subfamily of the ExoIII family purinic/apyrimidinic (AP) endonucleases. This subfamily includes Neisseria meningitides Nape and related proteins. These are Escherichia coli exonuclease III (ExoIII)-like AP endonucleases and belong to the large EEP (exonuclease/endonuclease/phosphatase) superfamily that contains functionally diverse enzymes that share a common catalytic mechanism of cleaving phosphodiester bonds. AP endonucleases participate in the DNA base excision repair (BER) pathway. AP sites are one of the most common lesions in cellular DNA. During BER the damaged DNA is first recognized by DNA glycosylase. AP endonucleases then catalyze the hydrolytic cleavage of the phosphodiester bond 5' to the AP site, and this is followed by the coordinated actions of DNA polymerase, deoxyribose phosphatase, and DNA ligase. If left unrepaired, AP sites block DNA replication, and have both mutagenic and cytotoxic effects. AP endonucleases can carry out a variety of excision and incision reactions on DNA, including 3'-5' exonuclease, 3'-deoxyribose phosphodiesterase, 3'-phosphatase, and occasionally, nonspecific DNase activities. Different AP endonuclease enzymes catalyze the different reactions with different efficiences. Many organisms have two AP endonucleases, usually one is the dominant AP endonuclease, the other has weak AP endonuclease activity; for example, Neisseria meningitides Nape and NExo. Nape, found in this subfamily, is the dominant AP endonuclease. It exhibits strong AP endonuclease activity, and also exhibits 3'-5'exonuclease and 3'-deoxyribose phosphodiesterase activities.	2.00083e-145
CP034655.1\|AZR31965.1\|3706121_3706781_+\|orotate-phosphoribosyltransferase	gnl\|CDD\|234771	PRK00455, pyrE, orotate phosphoribosyltransferase; Validated.	1.29859e-76

>CP034655.1|AZR31958.1|3690056_3691160_-|DUF4380-domain-containing-protein
MSSSPKRVIPLMVTGAVALLCMTSSGAVTPAPAHAAAAERIRLNSKEVELSATPAFGGRVLSFNLRGQPNVLKVGAAVKQQPAPEVSATSGDIPYFGHDVWVGPQSQWWLHQQLNHERQAAAAVWPPDPYLSLAQTQVTLQGHDALEFEGVPSPLTGVQLRKQVKLSAARADTVEIHASARNIRTQPIAWDLWFNTRVAATTRVFVPVAAAADIRVQPPSEAGTTAPRFKLKRGVFALRADARQDGLIQRGKLLLQPSAGWMAGFAGGQVLVIRFAHQPLAAIHPEQGQVELYLDAPPQHPEQGLLEMEVHAPYRQLAPGAQMQAQEQWTLLRYTGPNEEQAQRQFLCGKTKTLALANACDGPSAPR
>CP034655.1|AZR31957.1|3688386_3689988_-|glucan-biosynthesis-protein-D
MQRRHFLKNAAAALAALGLPALPQWALAAKAVGLRRLGQPQPFDYAWLKGQARELAKAPYKSHKQVLPGPLEALNWDQYQSIRYRQDHALWADGNGKFQAKFFHLGLYFHTPVHIYDIVDGKAQQLAYDPAAFDYGKSGLGGKQLPKDLGFAGFRLNTRKDTDRDFSAFLGASYFRAVGKEGQYGQSARGLAIDTGTGGPEEFPDFIAYYLEQPADDSNTVVVYGLLDSPSIAGAYRFAITNGDVLLMDIDSALYPRKTIERLGIGPCTSMYQVGENDNRMDWDWRPEIHDTDGLAMWTGGGEWIWRPLCNPPHLRFNMFVDENPRGFGLLQRDRNFDHYQDDGVFYEKRPCLWVEPKSGWGKGSVQLVEIPTVDETFDNIVAFWNPQAKPQPGQELLMGYRLYWGAQPPASSPLAHCVATRTGLGGIVGQKRSHFSWRFVVDFTGGELAALTKDPKAKVEAVLQVSRGTTEIVSARPLHELKGYRAMFDLVPPDEGAQQIDIRLYLRANGKPLTETWLYQWTPPAASERRMY
>CP034655.1|AZR31956.1|3686975_3688220_+|GAF-domain-containing-sensor-histidine-kinase
MDPLPPALRADIARVGRLSSVPDVLTVLTRLTGMGFAAVARVTEARWITCQVHDTLSFGLRPGDELPLATTFCDSVRVKGNAVWFGHASDNPVYRDHPSPRLYGFESYVSVPIKFDDGSVFGTLCALDPQPRVMDAPLVEKVELLAQLLAAQIQAEQRAEESAQESRRARSELGRVGASARLREEFIGILAHDLRNPLQSMHAVVDMLSIDQLNHRYGNSFRSMQRSLRRMEELIDFACDFARGIERDWLQLDYGDGSDLLDALSQVVDETRAAYPNQVLSTHVAIDEPVHGDAIRLAQMFGSLMINAVVQGPQSSLIKAVAVTEHGRLRFEVCNLDGIDPRRLDVLHASTHVHAGGRALPDVDLGLHMAAQIAKAHQGELRIISEKGGTCFRVELACARPRGRLQLVDNSAPA
>CP034655.1|AZR31955.1|3685887_3686517_+|thymidine-kinase
MAKLYFYYSAMNAGKTTTLLQSAHNYRERGMRTLILTPKLDHRAGSGVVASRIGLRADGRIFERDTELQQLVERDIHNDGPLHCVLVDEAQFLSRTQVWQLSEVVDRLRIPVLCYGLRTDFRGELFEGSQFLLAWADELEEIKTICHSGSKATMTVRVDAHGHAVQDGPQVEIGGNERYVSVSRAEFKKIMRGEGRIDPLQIALPLPVA
>CP034655.1|AZR31954.1|3683703_3685680_-|DNA-helicase-Rep
MYGLNPPQSAAVLHCEGPLLVLAGAGSGKTRVIVEKIAHLIAIGRYPAKRIAAITFTNKSAKEMRERVAKRIRGDGADGLTICTFHALGLKFLQIEHAAAGLKRGFSIFDSDDAAAQIKDLMHGAKPDAIEDAKNLISRAKNAGLSPEQAMAAARSTREKEAASLYERYQARLTTFNAVDFDDLIRLPVQILEANEDIVMGWRERIGYLLVDECQDTNDAQYRLLKMLAGPRGNFTCVGDDDQSIYAWRGANPENLQQMARDYPALEIIKLEQNYRCSNRVLRAANALIAHNPHEHLKTLWSDQADGERIRVWECRDSEHEAEKVAAEIAFLGTAKQVPWSDFCILFRGNFQSRPLEKALQLLRVPYHLTGGTAFLERQEVKDVLSWLRLIVNPDDDAAFLRAVQSPKREVGATSLARLAELASAKSVPMSRAAESMGALQHLPPRAANGLSAFTDILRDMREHSSSMPAGELVRMLAEKSGLLNDLRNQSKDETGFQRRKRNLDELAEWFEGGPRGASASDLAAQLALLSRNDKDDGGNQVRMMTMHASKGLEFRYVFIVGCEDGVLPHEVSLEEGNLQEERRLLYVGITRAKDQLWMSHSKLTRKFGEHVRLKPSRFFDEIPAEELQRDGADPVADAERKKERASAGLAAIQALFD
>CP034655.1|AZR31953.1|3683060_3683615_-|N-acetyltransferase
MMPECDVTVVIETPRLRLRTLDPEHDADAMLELVNDPGFIAGINDRGIRTREQARAHLRAWAQAHQERYGFAHWAVETREDAAFVGTLGLLCRDTLPVPHIGFALLPAYRGKGYVTEAGRAVLDYARAVLGLSQLCAIVSPDNANSIRALEKLGLQQHGLRELSPETAAVLYYEIDLGPARSAS
>CP034655.1|AZR31952.1|3682716_3682920_-|DUF4272-domain-containing-protein
MRHAPLDAPVPARSPYLRLHWAVRQAGHSGQPVPAGIVPGVVYERHYALNWLPHFEDAEWDEVDTPT
>CP034655.1|AZR31951.1|3680345_3681296_-|5'-nucleotidase,-lipoprotein-e(P4)-family
MRPSLYALLSLLACTALALSACKPAGTQPAPHAQEATATANADASAAVSKAATSTTTAPAGDDNLNAVLWMQRSEEYRAVAEQTYRAAADKLDSALKQPNWDALVPEERDNAATILKPAVVLDVDETVLDNSPYQARLLRDGKEYDELSWDQWVAEKKATAIPGVVDFAKAANARGITLIYISNRAVHLKDATLANLRSVGLPVADDSVFLGLGTVVQGCEQNGSEKNCRRQLAGQKYRVLMQFGDQLGDFVQVTANTSQARDALLQQYHDWFGERWWMLPNPSYGGWEPAQFNNDYAQPWQKRHDAKRAALEVAR
>CP034655.1|AZR31950.1|3679617_3680349_-|orotidine-5'-phosphate-decarboxylase
MSRAPLPLAAHERLIFALDVPSHDEAIAWVDRLGDSVSFYKIGMELLASGEYFHVLDALAKRDKRVFVDLKFFDIPATVAGTIRRLAQWPVSYCTVHGWHVGMMQAAAEANHGDMRLLAVTVLTSMGRPDLAAMGIDREPVEVVVERALAAQAAGIDGVIASGQEAGPIRRATGAAFSIVCPGIRPGGPVGDDQQRTVGVAQAFTDGADAIVVGRPIRLASEPAAAANAIQAEIRTALGERRD
>CP034655.1|AZR31949.1|3677704_3679225_+|tryptophan-7-halogenase
MIPAPLRNIVVVGGGTAGWMAAAAFARVLGPTFNVQLIESEQLGTVGVGEATVPHIKAFNNLLGIDEAEFVRQTQGSFKLGIEFVDWQRRGSAYMHGFGTQIGHPLGLLPFHQYWIKQHARGKAQPLGAYTLNTVAAARGKFMTSAGDVPANSPLANIAYAYHFDATQYAHFLRRYSEQRGVTRIEGLVEQVQLHPESGHVQSLQLASGQTVHGDLFIDCSGFRGLLIEEALHTGYHDFTHWLPCDRAFAVACEKVGPPTPYTRSTARAAGWQWRIPLQHRTGNGYVYCSAHISDDEAAATLLANLDGKPLADPRPLHFTTGRRKQFWNRNVVALGLASGFLEPLESTSIHLIQSGISKLLELFPREGISPVLVQRYNDRSAFEFDRIRDFLLLHYHATERDDSAFWRHCRSMPITPELQTTLDLFRDSGRFYRNAEEMFAEISWVQVMVGQGILPQGYHPLVDQVPDRDAEGFLASVAQTIAHCVDVMPTHQQFIERYCKAAVPA
>CP034655.1|AZR31959.1|3691795_3692611_-|bifunctional-DNA-formamidopyrimidine-glycosylase/DNA-(apurinic-or-apyrimidinic-site)-lyase
MPELPEVETTLRGLSPHLVAQRIHGVILRRPDLRWPIPEQIERLLPGAIITNVRRRAKYLLIDTDAGGSALLHLGMSGSLRVLPGDTLPRSHDHVDISLQNGRVLRFNDPRRFGCLLWQSDTQAHELLAALGPEPLSDAFTGDYLHALAYGRRAAVKTFLMDQAVVVGVGNIYAAESLHRAGISPLREAGKVSLDRYRRLADAVKDILAYAIQRGGTTLRDFISPDGAPGYFEQELTVYGREGEPCKQCGRLLKHATIGQRATVWCGSCQR
>CP034655.1|AZR31960.1|3698939_3700151_-|tyrosine--tRNA-ligase
MATIEESLALIGRGAEEILKLDQLEVRLKSGMPLRVKAGFDPTAPDLHLGHTVLLNKMRQFQQLGHQVIFLIGDFTGMIGDPSGKNATRKPLSREDVLANARTYEEQVFKILDRERTEVRFNSEWFGQMSAADMIKLSAQHTVARMLERDDFAKRFGSQQPIAIHEFLYPLVQGYDSVALKADVELGGTDQKFNLLMGRGLQEHYGQAPQIVLTMPLLEGLDGVAKMSKSLGNYIGINEPAIDIVTKTMKIGDELTWRWIDLLSFDISVAEALRLKEQVVSGELHPREVKLRLARELATRFHDAATAEQAIAGWHAVVTGQGDTSLLPLQEILVPAEGLRIASLLTTAGLTPSNSEATRKLKERAVRIDGEVMEDASRVFTQGFEGLIQVGKRNFARVSLVIG
>CP034655.1|AZR31961.1|3700321_3701740_+|hypothetical-protein
MQNSEQGRARKRRFQERLHVLHDTALHRKLKAHLPAAFNDRWTRRHWIHASLFATIGALVATIVPGFSSAIDTPLSSPSTLALPLPPLLPSRKQLAPSTDWEILQVKPGQTLSTLFGELGIPTTVMYQVLAHPGTKEALTKLRPGAEIAFDMPTPGQLRALRFDRDDSHRVELRLLGDSVRENVTERATTTRTVVASGEISSSLYASANKSGLSPAAVAIMTDEIFKYDIDFDKDLQPGDRFSVVMDETWREGERISTGDILAATFTTGGKTYTGFRFERAGKPAEYFDINGRPLKKSFIRMPVAYSRISSTFGARMHPVLGTMRMHKGVDYAAASGTPIMAAGDARVVFVGTQRGYGNVVILDHGKNYSTLYGHMSRFGKIKAGQHINQGTVIGYVGMTGMATGPHLHYEFRVAGQQRNPMSVTMPPPEPLQGAELAAFRAQTAPAMARIEGMEKLIYADAGKPANGKSRG
>CP034655.1|AZR31962.1|3702123_3703257_+|anhydro-N-acetylmuramic-acid-kinase
MPVLEHVDSPLYLGLMSGTSADGIDAALVRFADDTHRRCELVAGTTVAWEPQLRETLVALGQGAETVAIDALGQLDAQVGLAFAAAANQLIRDSGVARRQIHAIGSHGQTIRHRPKADPAFTWQIGDASRIAEHTGITTVADFRRRDVAAGGQGAPLMPAFHLAMLGAGDEDRAVLNLGGIGNLTLIPRDGAVLGFDTGPANALLDSWCQRHRGTSFDVDGAFAASGRVDAAVLQTLLADPWFALPPPKSTGREQFHLDWALQAMGSATLDAADVQATLLELTAASVADALLRLQPTTRRVLVCGGGVRNPVLLARLAARLPGVVVESSARHGLDPDYLEAMGFAWLAAELLAGRAANLPSVTGAAGPRLLGAIYPA
>CP034655.1|AZR31963.1|3703298_3703526_-|hypothetical-protein
MTDLVLRDIDPVLVDRIRRISVARGWTQHQTVMHLLEQGLFASEYEVTGGLQHPEVDALAEAIAALKALPAGNNP
>CP034655.1|AZR33009.1|3703584_3704805_-|MFS-transporter
MALLGFGSGLPFLLIASQTLSTRLRDVGLDLGSIGLISLASFFYLLKFLWAPLIDRYAFPLTAFLGRRRSWLLVAQIGVTIGLFALAFSRPDLSVTGLVGWVLFASFWGATQDSVVDAYRIEIAPDAAQAALAATYTLGYRIGLILGGAGALYMAQYLDWTWAYVGMAALMLVPIVTTLLCREPDRPEATVVRRIDVVGAFWQPISSFFSSNGLAMGVVLLLFVGLYKFPDQVIDVMAGPFYLDSGFTKADIATVSKLFGVWMGIVGAFAGGAAIAAFGFRRMLLVAALGVALSNLAFLLMAHNPGKLWAFYAALSADNLFQGFAATVLVAFMSSLTDRNFTATQYALLVSLANLPGKFAGGVSGFLVQATSYSTFFILSALTVIPTLMLLAWLWPRLLAHDRRPD
>CP034655.1|AZR31964.1|3705199_3706000_-|exodeoxyribonuclease-III
MRIISFNANGLRSAASKGFFAWFAAQDADVLCVQETKAQEHQLAGPDFLPTGYKAWFRDASTKKGYSGVAIYSRHEPDEVRTALGWPEFDEEGRYIEARFGNLSVVSFYIPSGSSGELRQGYKFQVMEWLRPILDEWLASGRQYVLCGDWNIVRTALDIKNWKSNQKNSGCLPPERDWLNGLCADVPEDANAAEGRGWVDSYRVLHPQGQDYTWWSNRGAARTNNVGWRIDYQLVTPGLRDTLKACSIYREERFSDHAPYIVDYAQ
>CP034655.1|AZR31965.1|3706121_3706781_+|orotate-phosphoribosyltransferase
MTDHRTRFLQLALGADALRFGEFTLKSGRLSPYFFNAGRFDSGVKTAQLAQCYADAIDAAGVDFDLLFGPAYKGIPLATALACAYAGRGRDLPLAFNRKEAKDHGEGGTLIGAPLAGRKVLIVDDVITAGTAIREALGIIRAAGGVPSGIVVALDRQEIASEQDRRSAAQAVAAEAGIPVIAVANLGDLLAFAARNADLVDFREPLLAYRGRYGTDTTG
>CP034655.1|AZR31966.1|3706824_3707484_+|hypothetical-protein
MALFAAIAANVAATFAVAVPAGAQDKATAKKLYCWNQNGARVCSDTLPPEAVNQARDEFNAKSGMRSAEVQRAMSSDERTAAAASEQQRQADLAAEQMRQRTDQAMLMSYQSEDDLRRVFNERIVIVDNNIHTARFNVTSLREGLASMLRSAGDRELAGQAVADKLAADIQQRHRDLMAQLRLQTSFEQQRVALDSEIADILQRYRAMKEPPGGASPTG
>CP034655.1|AZR31967.1|3707599_3708397_+|ParA-family-protein
MARIIAIANQKGGVGKTTTAVNLAAGLARAPKRVLLVDLDSQGNATMGSGIDKRDVAASTCDLLLGENTAAEIRVTAPEGFDLLPGNIDLTAAEIQLMDQGEREQRLKRALAPIRNEYDFILIDCPPALSLLTLNALTAADSIIVPMQCEYYALEGLTALLETIEALRANLNPELEIEGVLRTMFDIRNNLANAVSAELTEHFGDKVFRTIVPRNVRLAEAPSHGQSIVGYDRTSRGGVAYLGLAGEIVRRQNDRNKTYRPVETV

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Crispr_ID: CP034655_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP034655_4

4616998-4620326

TypeI

I-C

Consensus_repeat	Method
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	PILER-CR
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CRISPRCasFinder
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CRT

50 spacers

cas2,cas1,cas4,cas7,cas8c,cas5,cas3

The CRISPR arrays of CP034655_4

>merge|CP034655|4|4616998-4620326|PILER-CR,CRISPRCasFinder,CRT
GTCGCGCCCTCACGGGCGCGTGGATTGAAACAGGCAAATGCTTGCCTGGCGATGGTCAGTGCGCGTCGCGCCCTCACGGGCGCGTGGATTGAAACCCTCTGTGGATCTCGCTCGCTATCGGCCTCCTGTGTCGCGCCCTCACGGGCGCGTGGATTGAAACTGCCAGGGCGCGCACACTCTTCCTGTCTAGACGCGTCGCGCCCTCACGGGCGCGTGGATTGAAACCACCACCAATCGACTACACACGCCGACCGGTGCAAGTCGCGCCCTCACGGGCGCGTGGATTGAAACAAGCATGGCGATGTGGTTCGCGACTTCCGCGTGCGGGTCGCGCCCTCACGGGCGCGTGGATTGAAACGTCAGGTAAAGGGTCTGCTCTGCCTTTGCATACAGGGTCGCGCCCTCACGGGCGCGTGGATTGAAACAGGCATACACAGGAAACTAGGGATAAAATAAGTGCGTCGCGCCCTCACGGGCGCGTGGATTGAAACTTCACCTAGGCTCCTACCCCACCGCTGACCTGGCCGTCGCGCCCTCACGGGCGCGTGGATTGAAACGCTCCTCCACAGCCTTAGTTGAGTCATGGCATAGCGTCGCGCCCTCACGGGCGCGTGGATTGAAACCAGTTCTACGCAGAACACGAAACAATGACGACATGTCGCGCCCTCACGGGCGCGTGGATTGAAACCTTTAGCAGGCGTTCACCACTCTCTTGATCATATGGTCGCGCCCTCACGGGCGCGTGGATTGAAACCTGGTGTGTCTGTCTACCTTGGTAAGAGTTGGCGTCGCGCCCTCACGGGCGCGTGGATTGAAACCAAGTCCACCTTGTCATAACCGTACCGATTCGCACCGGTCGCGCCCTCACGGGCGCGTGGATTGAAACAACCAACGCAAGTCTTCCGGGGCGTCTGGATCTGCGTCGCGCCCTCACGGGCGCGTGGATTGAAACCTGAAGCCCTGCCAGGTTACGTACCTTCCGAAGGGAGTCGCGCCCTCACGGGCGCGTGGATTGAAACCAGTCCTGAATAATGTCCTCATGCCCAATGAACTGGTCGCGCCCTCACGGGCGCGTGGATTGAAACCCTTGCGTTCGCCTGTCTTTGGGTCTCCCGTCCAGTGGTCGCGCCCTCACGGGCGCGTGGATTGAAACAGATTTTGGCGGTGCATCTGTTGTACTCCCTCTGCGTCGCGCCCTCACGGGCGCGTGGATTGAAACTGGGCATTGGACAACCATCAGCCCCTATGCAAGCGTCGCGCCCTCACGGGCGCGTGGATTGAAACCCACTGTGGCAGGGCCTTGACATAACCGGGGAAGCGTCGCGCCCTCACGGGCGCGTGGATTGAAACAGTACAGGTCACTGCATAGTGCCTACTGCAGTACGGGTCGCGCCCTCACGGGCGCGTGGATTGAAACCAATATGGAGAGTTCCTGATGGACTACCTAGTTGAGTCGCGCCCTCACGGGCGCGTGGATTGAAACTCGCCAGAGAGCCTTACCAGCGAACTTGCCGTGGGTCGCGCCCTCACGGGCGCGTGGATTGAAACAAGGTAAGCACAATGTGGTTGAGCAAGATCTGTCCGTCGCGCCCTCACGGGCGCGTGGATTGAAACTTAGCAAGCATGCCAACGTAGAGGTGGGCCTGAAGTCGCGCCCTCACGGGCGCGTGGATTGAAACTTAGCACCACCAGCAAAGCGGGCTAGCTGATACTGTCGCGCCCTCACGGGCGCGTGGATTGAAACAGGCACTGCACTGTCCCAGCCATTGGGGCCCTTTGAGTCGCGCCCTCACGGGCGCGTGGATTGAAACTGGCGGATTAGCTCCCCCTTAGCTGTATCCACGTAGTCGCGCCCTCACGGGCGCGTGGATTGAAACACAAAATAAGGAGGCCCTATGGCCGAGCAAAAGTCGCGCCCTCACGGGCGCGTGGATTGAAACTTTGTCGGCTTTTTCAGCAAGGGCAAGCAGGAGACGTCGCGCCCTCACGGGCGCGTGGATTGAAACGAGCTATGCGTGTTCGAACCAGTGCCAGTACACAGTCGCGCCCTCACGGGCGCGTGGATTGAAACAGCAATGTGGATTCGCAGGCTGGCGGCTCGTTACAGGTCGCGCCCTCACGGGCGCGTGGATTGAAACTGGGAGACTGTCAGACAATAAGCTGGTGCTGACGGTCGCGCCCTCACGGGCGCGTGGATTGAAACTGCAGGATGCACAGAACCACCAAGCATGGATGCAGGTCGCGCCCTCACGGGCGCGTGGATTGAAACCTAAGTGATAGCGAAGAATGCAGGCGGCTGACCTAGTCGCGCCCTCACGGGCGCGTGGATTGAAACGTGTACACATCTGCCGCCCCTAGGTCCGCAGAGGCAAGTCGCGCCCTCACGGGCGCGTGGATTGAAACAAGACTTGGTACTTTGACGAGAGTGCAGAGGGGTGGTCGCGCCCTCACGGGCGCGTGGATTGAAACAAGACTTGGTACTTTGACGAGAGTGCAGAGGGGTGGTCGCGCCCTCACGGGCGCGTGGATTGAAACACTCTTTTGTACCAGCAGCGCATCATTCTGCGCCAGTCGCGCCCTCACGGGCGCGTGGATTGAAACCTGTGCTGCATGGCGCACGCGAGATTGCAGAGTTGTCGCGCCCTCACGGGCGCGTGGATTGAAACTTTGTCAAACATGGTAGCGGCCTCCGTTGGTGTAGGTCGCGCCCTCACGGGCGCGTGGATTGAAACACCTTTGCAACCCTTACCAGCATACAGGCCGATGTCGCGCCCTCACGGGCGCGTGGATTGAAACATCCCCATCCTCGTTTTGTGTGGCCGGTGCGGGCCGGTCGCGCCCTCACGGGCGCGTCGATTGAAACGTCTCGCTGGCGACGTTCTGGCTGCTGCTGCCCACCGGGTCGCGCCCTCACGGGCGCGTGGATTGAAACTCCTCCGGAGTCATGGTTGCATCCCCGGCTTGGCGGTCGCGCCCTCACGGGCGCGTGGATTGAAACGTTTCCAAGGTCGCAGCCAACGTCACCCGCATCATGTCGCGCCCTCACGGGCGCGTGGATTGAAACGTTGATCAATATGGCTCGGCTGCGGAAATAGTGGATGGTCGCGCCCTCACGGGCGCGTGGATTGAAACAGGCACGAAGGCGCCCGGCGTAGCCTCGCGCTCAAGTCGCGCCCTCACGGGCGCGTGGATTGAAACTGGTCTGCGTACCCGAACAAGAAGGGCCGGCAAGAGTCGCGCCCTGCCGGGCGCGTGGATTGAAACAACGGCCCGTTGATGATTCGGCACGTGGCGCAGGGTCGCGCCCTCACAGACGCGTAGATTGAAAC

>CP034655|4|2|4616998-4620261|PILER-CR
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	AGGCAAATGCTTGCCTGGCGATGGTCAGTGCGC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CCTCTGTGGATCTCGCTCGCTATCGGCCTCCTGT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TGCCAGGGCGCGCACACTCTTCCTGTCTAGACGC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CACCACCAATCGACTACACACGCCGACCGGTGCAA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	AAGCATGGCGATGTGGTTCGCGACTTCCGCGTGCGG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	GTCAGGTAAAGGGTCTGCTCTGCCTTTGCATACAGG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	AGGCATACACAGGAAACTAGGGATAAAATAAGTGC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TTCACCTAGGCTCCTACCCCACCGCTGACCTGGCC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	GCTCCTCCACAGCCTTAGTTGAGTCATGGCATAGC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CAGTTCTACGCAGAACACGAAACAATGACGACAT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CTTTAGCAGGCGTTCACCACTCTCTTGATCATATG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CTGGTGTGTCTGTCTACCTTGGTAAGAGTTGGC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CAAGTCCACCTTGTCATAACCGTACCGATTCGCACCG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	AACCAACGCAAGTCTTCCGGGGCGTCTGGATCTGC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CTGAAGCCCTGCCAGGTTACGTACCTTCCGAAGGGA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CAGTCCTGAATAATGTCCTCATGCCCAATGAACTG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CCTTGCGTTCGCCTGTCTTTGGGTCTCCCGTCCAGTG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	AGATTTTGGCGGTGCATCTGTTGTACTCCCTCTGC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TGGGCATTGGACAACCATCAGCCCCTATGCAAGC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CCACTGTGGCAGGGCCTTGACATAACCGGGGAAGC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	AGTACAGGTCACTGCATAGTGCCTACTGCAGTACGG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CAATATGGAGAGTTCCTGATGGACTACCTAGTTGA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TCGCCAGAGAGCCTTACCAGCGAACTTGCCGTGG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	AAGGTAAGCACAATGTGGTTGAGCAAGATCTGTCC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TTAGCAAGCATGCCAACGTAGAGGTGGGCCTGAA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TTAGCACCACCAGCAAAGCGGGCTAGCTGATACT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	AGGCACTGCACTGTCCCAGCCATTGGGGCCCTTTGA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TGGCGGATTAGCTCCCCCTTAGCTGTATCCACGTA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	ACAAAATAAGGAGGCCCTATGGCCGAGCAAAA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TTTGTCGGCTTTTTCAGCAAGGGCAAGCAGGAGAC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	GAGCTATGCGTGTTCGAACCAGTGCCAGTACACA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	AGCAATGTGGATTCGCAGGCTGGCGGCTCGTTACAG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TGGGAGACTGTCAGACAATAAGCTGGTGCTGACG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TGCAGGATGCACAGAACCACCAAGCATGGATGCAG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CTAAGTGATAGCGAAGAATGCAGGCGGCTGACCTA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	GTGTACACATCTGCCGCCCCTAGGTCCGCAGAGGCAA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	AAGACTTGGTACTTTGACGAGAGTGCAGAGGGGTG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	AAGACTTGGTACTTTGACGAGAGTGCAGAGGGGTG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	ACTCTTTTGTACCAGCAGCGCATCATTCTGCGCCA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CTGTGCTGCATGGCGCACGCGAGATTGCAGAGTT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TTTGTCAAACATGGTAGCGGCCTCCGTTGGTGTAG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	ACCTTTGCAACCCTTACCAGCATACAGGCCGAT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	ATCCCCATCCTCGTTTTGTGTGGCCGGTGCGGGCCG
GTCGCGCCCTCACGGGCGCGTCGATTGAAAC	GTCTCGCTGGCGACGTTCTGGCTGCTGCTGCCCACCGG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TCCTCCGGAGTCATGGTTGCATCCCCGGCTTGGCG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	GTTTCCAAGGTCGCAGCCAACGTCACCCGCATCAT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	GTTGATCAATATGGCTCGGCTGCGGAAATAGTGGATG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	AGGCACGAAGGCGCCCGGCGTAGCCTCGCGCTCAA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TGGTCTGCGTACCCGAACAAGAAGGGCCGGCAAGA
GTCGCGCCCTGCCGGGCGCGTGGATTGAAAC

>CP034655|4|3|4616998-4620326|CRISPRCasFinder
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	AGGCAAATGCTTGCCTGGCGATGGTCAGTGCGC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CCTCTGTGGATCTCGCTCGCTATCGGCCTCCTGT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TGCCAGGGCGCGCACACTCTTCCTGTCTAGACGC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CACCACCAATCGACTACACACGCCGACCGGTGCAA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	AAGCATGGCGATGTGGTTCGCGACTTCCGCGTGCGG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	GTCAGGTAAAGGGTCTGCTCTGCCTTTGCATACAGG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	AGGCATACACAGGAAACTAGGGATAAAATAAGTGC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TTCACCTAGGCTCCTACCCCACCGCTGACCTGGCC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	GCTCCTCCACAGCCTTAGTTGAGTCATGGCATAGC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CAGTTCTACGCAGAACACGAAACAATGACGACAT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CTTTAGCAGGCGTTCACCACTCTCTTGATCATATG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CTGGTGTGTCTGTCTACCTTGGTAAGAGTTGGC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CAAGTCCACCTTGTCATAACCGTACCGATTCGCACCG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	AACCAACGCAAGTCTTCCGGGGCGTCTGGATCTGC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CTGAAGCCCTGCCAGGTTACGTACCTTCCGAAGGGA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CAGTCCTGAATAATGTCCTCATGCCCAATGAACTG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CCTTGCGTTCGCCTGTCTTTGGGTCTCCCGTCCAGTG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	AGATTTTGGCGGTGCATCTGTTGTACTCCCTCTGC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TGGGCATTGGACAACCATCAGCCCCTATGCAAGC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CCACTGTGGCAGGGCCTTGACATAACCGGGGAAGC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	AGTACAGGTCACTGCATAGTGCCTACTGCAGTACGG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CAATATGGAGAGTTCCTGATGGACTACCTAGTTGA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TCGCCAGAGAGCCTTACCAGCGAACTTGCCGTGG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	AAGGTAAGCACAATGTGGTTGAGCAAGATCTGTCC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TTAGCAAGCATGCCAACGTAGAGGTGGGCCTGAA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TTAGCACCACCAGCAAAGCGGGCTAGCTGATACT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	AGGCACTGCACTGTCCCAGCCATTGGGGCCCTTTGA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TGGCGGATTAGCTCCCCCTTAGCTGTATCCACGTA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	ACAAAATAAGGAGGCCCTATGGCCGAGCAAAA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TTTGTCGGCTTTTTCAGCAAGGGCAAGCAGGAGAC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	GAGCTATGCGTGTTCGAACCAGTGCCAGTACACA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	AGCAATGTGGATTCGCAGGCTGGCGGCTCGTTACAG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TGGGAGACTGTCAGACAATAAGCTGGTGCTGACG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TGCAGGATGCACAGAACCACCAAGCATGGATGCAG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CTAAGTGATAGCGAAGAATGCAGGCGGCTGACCTA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	GTGTACACATCTGCCGCCCCTAGGTCCGCAGAGGCAA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	AAGACTTGGTACTTTGACGAGAGTGCAGAGGGGTG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	AAGACTTGGTACTTTGACGAGAGTGCAGAGGGGTG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	ACTCTTTTGTACCAGCAGCGCATCATTCTGCGCCA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CTGTGCTGCATGGCGCACGCGAGATTGCAGAGTT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TTTGTCAAACATGGTAGCGGCCTCCGTTGGTGTAG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	ACCTTTGCAACCCTTACCAGCATACAGGCCGAT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	ATCCCCATCCTCGTTTTGTGTGGCCGGTGCGGGCCG
GTCGCGCCCTCACGGGCGCGTCGATTGAAAC	GTCTCGCTGGCGACGTTCTGGCTGCTGCTGCCCACCGG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TCCTCCGGAGTCATGGTTGCATCCCCGGCTTGGCG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	GTTTCCAAGGTCGCAGCCAACGTCACCCGCATCAT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	GTTGATCAATATGGCTCGGCTGCGGAAATAGTGGATG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	AGGCACGAAGGCGCCCGGCGTAGCCTCGCGCTCAA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TGGTCTGCGTACCCGAACAAGAAGGGCCGGCAAGA
GTCGCGCCCTGCCGGGCGCGTGGATTGAAAC	AACGGCCCGTTGATGATTCGGCACGTGGCGCAGG
GTCGCGCCCTCACAGACGCGTAGATTGAAAC

>CP034655|4|1|4616998-4620326|CRT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	AGGCAAATGCTTGCCTGGCGATGGTCAGTGCGC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CCTCTGTGGATCTCGCTCGCTATCGGCCTCCTGT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TGCCAGGGCGCGCACACTCTTCCTGTCTAGACGC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CACCACCAATCGACTACACACGCCGACCGGTGCAA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	AAGCATGGCGATGTGGTTCGCGACTTCCGCGTGCGG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	GTCAGGTAAAGGGTCTGCTCTGCCTTTGCATACAGG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	AGGCATACACAGGAAACTAGGGATAAAATAAGTGC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TTCACCTAGGCTCCTACCCCACCGCTGACCTGGCC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	GCTCCTCCACAGCCTTAGTTGAGTCATGGCATAGC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CAGTTCTACGCAGAACACGAAACAATGACGACAT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CTTTAGCAGGCGTTCACCACTCTCTTGATCATATG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CTGGTGTGTCTGTCTACCTTGGTAAGAGTTGGC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CAAGTCCACCTTGTCATAACCGTACCGATTCGCACCG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	AACCAACGCAAGTCTTCCGGGGCGTCTGGATCTGC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CTGAAGCCCTGCCAGGTTACGTACCTTCCGAAGGGA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CAGTCCTGAATAATGTCCTCATGCCCAATGAACTG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CCTTGCGTTCGCCTGTCTTTGGGTCTCCCGTCCAGTG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	AGATTTTGGCGGTGCATCTGTTGTACTCCCTCTGC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TGGGCATTGGACAACCATCAGCCCCTATGCAAGC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CCACTGTGGCAGGGCCTTGACATAACCGGGGAAGC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	AGTACAGGTCACTGCATAGTGCCTACTGCAGTACGG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CAATATGGAGAGTTCCTGATGGACTACCTAGTTGA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TCGCCAGAGAGCCTTACCAGCGAACTTGCCGTGG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	AAGGTAAGCACAATGTGGTTGAGCAAGATCTGTCC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TTAGCAAGCATGCCAACGTAGAGGTGGGCCTGAA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TTAGCACCACCAGCAAAGCGGGCTAGCTGATACT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	AGGCACTGCACTGTCCCAGCCATTGGGGCCCTTTGA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TGGCGGATTAGCTCCCCCTTAGCTGTATCCACGTA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	ACAAAATAAGGAGGCCCTATGGCCGAGCAAAA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TTTGTCGGCTTTTTCAGCAAGGGCAAGCAGGAGAC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	GAGCTATGCGTGTTCGAACCAGTGCCAGTACACA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	AGCAATGTGGATTCGCAGGCTGGCGGCTCGTTACAG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TGGGAGACTGTCAGACAATAAGCTGGTGCTGACG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TGCAGGATGCACAGAACCACCAAGCATGGATGCAG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CTAAGTGATAGCGAAGAATGCAGGCGGCTGACCTA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	GTGTACACATCTGCCGCCCCTAGGTCCGCAGAGGCAA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	AAGACTTGGTACTTTGACGAGAGTGCAGAGGGGTG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	AAGACTTGGTACTTTGACGAGAGTGCAGAGGGGTG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	ACTCTTTTGTACCAGCAGCGCATCATTCTGCGCCA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CTGTGCTGCATGGCGCACGCGAGATTGCAGAGTT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TTTGTCAAACATGGTAGCGGCCTCCGTTGGTGTAG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	ACCTTTGCAACCCTTACCAGCATACAGGCCGAT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	ATCCCCATCCTCGTTTTGTGTGGCCGGTGCGGGCCG
GTCGCGCCCTCACGGGCGCGTCGATTGAAAC	GTCTCGCTGGCGACGTTCTGGCTGCTGCTGCCCACCGG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TCCTCCGGAGTCATGGTTGCATCCCCGGCTTGGCG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	GTTTCCAAGGTCGCAGCCAACGTCACCCGCATCAT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	GTTGATCAATATGGCTCGGCTGCGGAAATAGTGGATG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	AGGCACGAAGGCGCCCGGCGTAGCCTCGCGCTCAA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TGGTCTGCGTACCCGAACAAGAAGGGCCGGCAAGA
GTCGCGCCCTGCCGGGCGCGTGGATTGAAAC	AACGGCCCGTTGATGATTCGGCACGTGGCGCAGG
GTCGCGCCCTCACAGACGCGTAGATTGAAAC

Protein	Signature genes	Signature genes Name	Protein_function
CP034655.1\|AZR32651.1\|4622483_4623800_-\|amidohydrolase	unknown	unknown	gnl\|CDD\|349917
CP034655.1\|AZR32641.1\|4608643_4610938_+\|CRISPR-associated-endonuclease-Cas3''	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|350688
CP034655.1\|AZR32648.1\|4620455_4621010_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236776
CP034655.1\|AZR32657.1\|4632796_4633126_+\|glyoxalase	unknown	unknown	gnl\|CDD\|226134
CP034655.1\|AZR32656.1\|4632497_4632713_+\|VOC-family-protein	unknown	unknown	gnl\|CDD\|319899
CP034655.1\|AZR32638.1\|4602967_4603915_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|182990
CP034655.1\|AZR32650.1\|4621509_4622325_-\|NADPH-dependent-7-cyano-7-deazaguanine-reductase-QueF	unknown	unknown	gnl\|CDD\|236986
CP034655.1\|AZR32643.1\|4612094_4613939_+\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	cas8c	cd09757_cas8c_CAS-I-C	gnl\|CDD\|378245
CP034655.1\|AZR32653.1\|4625397_4628646_+\|acriflavine-resistance-protein-B	unknown	unknown	gnl\|CDD\|182501
CP034655.1\|AZR32649.1\|4621115_4621409_-\|LysM-peptidoglycan-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|236880
CP034655.1\|AZR32644.1\|4613935_4614814_+\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	cas7	cd09689_cas7_CAS-I-C	gnl\|CDD\|377458
CP034655.1\|AZR32645.1\|4614833_4615466_+\|CRISPR-associated-protein-Cas4	cas4	cd09637_cas4_CAS-I:CAS-II:CAS-V	gnl\|CDD\|273040
CP034655.1\|AZR32655.1\|4632196_4632382_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|319899
CP034655.1\|AZR32652.1\|4624058_4625303_+\|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|183194
CP034655.1\|AZR32639.1\|4604344_4606576_-\|NADP-dependent-isocitrate-dehydrogenase	unknown	unknown	gnl\|CDD\|377178
CP034655.1\|AZR32642.1\|4611423_4612098_+\|type-I-C-CRISPR-associated-protein-Cas5	cas5	cd09752_cas5_CAS-I-C	gnl\|CDD\|187534
CP034655.1\|AZR32654.1\|4628761_4631890_+\|efflux-RND-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|223911
CP034655.1\|AZR32646.1\|4615468_4616503_+\|type-I-C-CRISPR-associated-endonuclease-Cas1	cas1	cd09721_cas1_CAS-I-C	gnl\|CDD\|188360
CP034655.1\|AZR32640.1\|4606779_4608480_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227059
CP034655.1\|AZR32647.1\|4616518_4616809_+\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856

Protein	Function_ID	Function_description	E-value
CP034655.1\|AZR32651.1\|4622483_4623800_-\|amidohydrolase	gnl\|CDD\|349917	cd05667, M20_Acy1-like, M20 Peptidase aminoacylase 1 subfamily. Peptidase M20 family, uncharacterized subfamily of bacterial proteins that have been predicted as N-acyl-L-amino acid amidohydrolase (amaA), thermostable carboxypeptidase (cpsA-1, cpsA-2 in Sulfolobus solfataricus) and abgB (aminobenzoyl-glutamate utilization protein B), and generally are involved in the urea cycle and metabolism of amino groups. Aminoacylases 1 (ACY1s) comprise a class of zinc binding homodimeric enzymes involved in the hydrolysis of N-acetylated proteins. N-terminal acetylation of proteins is a widespread and is a highly conserved process that is involved in the protection and stability of proteins. Several types of aminoacylases can be distinguished on the basis of substrate specificity. ACY1 breaks down cytosolic aliphatic N-acyl-alpha-amino acids (except L-aspartate), especially N-acetyl-methionine and acetyl-glutamate into L-amino acids and an acyl group. However, ACY1 can also catalyze the reverse reaction, the synthesis of acetylated amino acids. ACY1 may also play a role in xenobiotic bioactivation as well as the inter-organ processing of amino acid-conjugated xenobiotic derivatives (S-substituted-N-acetyl-L-cysteine).	0
CP034655.1\|AZR32641.1\|4608643_4610938_+\|CRISPR-associated-endonuclease-Cas3''	gnl\|CDD\|350688	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3. CRISPR-associated (Cas) 3 is a nuclease-helicase responsible for degradation of dsDNA. The two enzymatic units of Cas3, a histidine-aspartate (HD) nuclease and a Superfamily 2 (SF2) helicase, may be expressed from separate genes as Cas3' (SF2 helicase) and Cas3'' (HD nuclease) or may be fused as a single HD-SF2 polypeptide. The nucleolytic activity of most Cas3 enzymes is transition metal ion-dependent. Cas3 is a member of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	5.06235e-57
CP034655.1\|AZR32648.1\|4620455_4621010_-\|hypothetical-protein	gnl\|CDD\|236776	PRK10856, PRK10856, cytoskeleton protein RodZ.	0.00310121
CP034655.1\|AZR32657.1\|4632796_4633126_+\|glyoxalase	gnl\|CDD\|226134	COG3607, COG3607, Predicted lactoylglutathione lyase [General function prediction only].	3.92491e-37
CP034655.1\|AZR32656.1\|4632497_4632713_+\|VOC-family-protein	gnl\|CDD\|319899	cd06588, PhnB_like, Escherichia coli PhnB and similar proteins. The Escherichia coli phnB gene is found next to an operon of fourteen genes (phnC-to-phnP) related to the cleavage of carbon-phosphorus (C-P) bonds in unactivated alkylphosphonates, supporting bacterial growth on alkylphosphonates as the sole phosphorus source. It was originally considered part of that operon. PhnB appears to play no direct catalytic role in the usage of alkylphosphonate. Although many of the proteins in this family have been annotated as 3-demethylubiquinone-9 3-methyltransferase enzymes by automatic annotation programs, the experimental evidence for this assignment is lacking. In Escherichia coli, the gene coding 3-demethylubiquinone-9 3-methyltransferase enzyme is ubiG, which belongs to the AdoMet-MTase protein family. PhnB-like proteins adopt a structural fold similar to bleomycin resistance proteins, glyoxalase I, and type I extradiol dioxygenases.	2.92591e-20
CP034655.1\|AZR32638.1\|4602967_4603915_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|182990	PRK11139, PRK11139, DNA-binding transcriptional activator GcvA; Provisional.	1.54636e-64
CP034655.1\|AZR32650.1\|4621509_4622325_-\|NADPH-dependent-7-cyano-7-deazaguanine-reductase-QueF	gnl\|CDD\|236986	PRK11792, queF, 7-cyano-7-deazaguanine reductase; Provisional.	4.3592e-174
CP034655.1\|AZR32643.1\|4612094_4613939_+\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	gnl\|CDD\|378245	pfam09709, Cas_Csd1, CRISPR-associated protein (Cas_Csd1). CRISPR loci appear to be mobile elements with a wide host range. This entry represents proteins that tend to be found near CRISPR repeats. The species range, so far, is exclusively bacterial and mesophilic, although CRISPR loci are particularly common among the archaea and thermophilic bacteria. Clusters of short DNA repeats with nonhomologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins.	0
CP034655.1\|AZR32653.1\|4625397_4628646_+\|acriflavine-resistance-protein-B	gnl\|CDD\|182501	PRK10503, PRK10503, MdtB/MuxB family multidrug efflux RND transporter permease subunit.	0
CP034655.1\|AZR32649.1\|4621115_4621409_-\|LysM-peptidoglycan-binding-domain-containing-protein	gnl\|CDD\|236880	PRK11198, PRK11198, LysM domain/BON superfamily protein; Provisional.	1.26222e-25
CP034655.1\|AZR32644.1\|4613935_4614814_+\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	gnl\|CDD\|377458	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7. CRISPR-associated protein Cas7 is one of the components of the type I-B cascade-like antiviral defense complex. In Haloferax volcanii, Cas5, Cas6 and Cas7 form a small complex that aids the stability of CRISPR-derived RNA.	2.06054e-155
CP034655.1\|AZR32645.1\|4614833_4615466_+\|CRISPR-associated-protein-Cas4	gnl\|CDD\|273040	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4. This model represents a family of proteins associated with CRISPR repeats in a wide set of prokaryotic genomes. This scope of this model has been broadened since it was first built to describe an archaeal subset only. The function of the protein is undefined. Distantly related proteins, excluded from this model, include ORFs from Mycobacteriophage D29 and Sulfolobus islandicus filamentous virus and a region of the Schizosaccharomyces pombe DNA replication helicase Dna2p.	2.35377e-44
CP034655.1\|AZR32655.1\|4632196_4632382_+\|hypothetical-protein	gnl\|CDD\|319899	cd06588, PhnB_like, Escherichia coli PhnB and similar proteins. The Escherichia coli phnB gene is found next to an operon of fourteen genes (phnC-to-phnP) related to the cleavage of carbon-phosphorus (C-P) bonds in unactivated alkylphosphonates, supporting bacterial growth on alkylphosphonates as the sole phosphorus source. It was originally considered part of that operon. PhnB appears to play no direct catalytic role in the usage of alkylphosphonate. Although many of the proteins in this family have been annotated as 3-demethylubiquinone-9 3-methyltransferase enzymes by automatic annotation programs, the experimental evidence for this assignment is lacking. In Escherichia coli, the gene coding 3-demethylubiquinone-9 3-methyltransferase enzyme is ubiG, which belongs to the AdoMet-MTase protein family. PhnB-like proteins adopt a structural fold similar to bleomycin resistance proteins, glyoxalase I, and type I extradiol dioxygenases.	3.3987e-05
CP034655.1\|AZR32652.1\|4624058_4625303_+\|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|183194	PRK11556, PRK11556, MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit.	1.50761e-94
CP034655.1\|AZR32639.1\|4604344_4606576_-\|NADP-dependent-isocitrate-dehydrogenase	gnl\|CDD\|377178	pfam03971, IDH, Monomeric isocitrate dehydrogenase. NADP(+)-dependent isocitrate dehydrogenase (ICD) is an important enzyme of the intermediary metabolism, as it controls the carbon flux within the citric acid cycle and supplies the cell with 2-oxoglutarate EC:1.1.1.42 and NADPH for biosynthetic purposes.	0
CP034655.1\|AZR32642.1\|4611423_4612098_+\|type-I-C-CRISPR-associated-protein-Cas5	gnl\|CDD\|187534	cd09752, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex; in subtype I-C this protein might be the endoribonuclease that generates crRNAs; also known as DevS family.	1.72681e-123
CP034655.1\|AZR32654.1\|4628761_4631890_+\|efflux-RND-transporter-permease-subunit	gnl\|CDD\|223911	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms].	0
CP034655.1\|AZR32646.1\|4615468_4616503_+\|type-I-C-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|188360	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the DVULG subtype of CRISPR/Cas system.	0
CP034655.1\|AZR32640.1\|4606779_4608480_+\|hypothetical-protein	gnl\|CDD\|227059	COG4715, COG4715, Uncharacterized conserved protein [Function unknown].	1.08729e-11
CP034655.1\|AZR32647.1\|4616518_4616809_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	1.02577e-32

>CP034655.1|AZR32647.1|4616518_4616809_+|CRISPR-associated-endonuclease-Cas2
MMILVSYDVSTSSPGGEKRLRKVAKACRDRGQRVQFSVFEIEVEPAQWTELRQQLCDLIDPALDSLRFYHLGAKWETRVEHIGAKPSLNLKGPLIF
>CP034655.1|AZR32646.1|4615468_4616503_+|type-I-C-CRISPR-associated-endonuclease-Cas1
MRRQLNTLYVTTDGAWLHKDGANVVLNVERQERTRLPVHMLESIVCIGRVGVSPQLLGFCAEQGISICYLTPQGRFLARVEGPVSGNVLLRREQYRCSDDPVRCAAIVRHLLAGKIHNQRAVLARGWRDHGERMIDIPAFQHALKRLKRIPQRLLIETSVDVLRGLEGEAAQSYFGVFGQLVRTEAPLLRFGGRNRRPPRDAFNALLSFLYTLLTHDCRSALETVGLDPAVGFLHRDRPGRPSLALDLAEEFRPLLGERLALSLINRRQLNERDFQVFDNGAVLLKDDARKTVLIAYQERKREQLQHAFLGEKIDIGLLPFVQAQLMARHLRGDLDGYPSFFWK
>CP034655.1|AZR32645.1|4614833_4615466_+|CRISPR-associated-protein-Cas4
MDDDDLIPLSALQHYLYCPRQCALIHVERQWAENRHTAEGRLLHERADVAHTQRRRGVRTVTAMPLLALELGITGKADVVEFHHDPAGEFAFPVEYKRGRPKSHRADEVQLCAQALCLESMLKRPVDAGALFYGQTRRRKDVVFDPALRELTQRTIAETRALLSHGLTPGARYDSKRCDACSLIDLCQPRLLGCGSVDTWLRRQLDAEEE
>CP034655.1|AZR32644.1|4613935_4614814_+|type-I-C-CRISPR-associated-protein-Cas7/Csd2
MSAIAHRYEFVYLFDVTNGNPNGDPDAGNLPRLDPETNRGLVTDVALKRKIRNYVALEQEGQPGHAIYMREKSVLNSQHELAWKALNIPPDEKEKYKKLPKDQAKAQELTSWMCSNFFDVRTFGAVMTTEINTGQVRGPVQLAFATSVEPVLPLEVSITRMAVTNEKDLEKERTMGRKHILPYGLYRAHGFVSAKLAERTGFSEEDLQLLWRALTNLFEHDRSAARGEMAARKLIVFEHEHPMGNAPAHVLFDKVKVERIDQADQGPARSFSDYRVVIDHALPAGVSVTELF
>CP034655.1|AZR32643.1|4612094_4613939_+|type-I-C-CRISPR-associated-protein-Cas8c/Csd1
MILSALADYYHRLLDDPTSGIAAPGYSQEKIGYAIVLDGGGRVVAVEDEHDYEGKKRIPKSVSVPASFKRPGIGTNPFFLWDKTSYALGVSASSKRSAQEHAAFKTLHQQALGGSEDPGLRALLTFLDTWSPAQFADHPQFSRYGEALLDTNLVFRLEGDTGYLHQRAAARAAWERLQGQSADGVSGICLISGHFAPLARLHPPVKGVNGAQSSGASIVSFNLDAFTSYGKNQGENAPISEQATFAYTTALNHLLRRDPRNRQRLQIGDSTVVFWAQARTTAHAEEAEDLIADFLRGGKTEGPGIADGQATQRLHLALEQVRQARPLREMDDALDDEARIFVLGLAPNASRLSIRFWETQTLAGFAARLAAHYQDLTLEPPAWKRPPTPQFLALQTAPVYGEHSKPKAEDVSPLLAGEVTRAILAGTRYPRSLLGGIVMRFRADGQVNPLRVALCRAVLAREARLNTQQGLSSTKGEPPVSLDTANTDPGYLLGRLFSSLENLQRTALGGQVNATIRDRYYGAASATPASIFPVLLRNAQNHFGKLRKDKAGLAVNLEKEVGQIIDALPASFPRSLPIHEQGRFAIGYYHQTQARLARNNGQDAPDTASEGEPA
>CP034655.1|AZR32642.1|4611423_4612098_+|type-I-C-CRISPR-associated-protein-Cas5
MSYGVKLHVWGERALFTRPEMKVERVSYDIITPSAARGILEAIHWKPAIRWVVDSIQVLKPIRFESIRRNEVGGKLSAASVSKAIKAGRTDMLVSYVEEDRQQRAATLLREVGYVIAAHFELTDKAGADDNVGKHLDIFNRRARRGQCFQAPCLGTREFPASFALIEDDAAMPAADATLAGERDLGWMLHDIDFADGMTPRFFRARMVDGRVEVPAPENGGVRA
>CP034655.1|AZR32641.1|4608643_4610938_+|CRISPR-associated-endonuclease-Cas3''
MELFAHSSKRQDRSDWQRLADHLFAVGERAARNAAPFGGQLLAGLAGQLHDLGKYTQKFQARLDGDPARVDHATWGARIACERYGTAGTLLAYGIAGHHAGLADGRPGHPAQSRPSLHERLSEDYRERELPPLLSDWERELSLPAKLALPDGFIGHPRQERRPFQLTVLTRMIFSCLVDADFTDTDDFYRRLEGRQSRAEETGTRPILPELRQCLDAHLATLPTKGGINPLRAQILSEVRAKAGMRPGLFSLTVPTGGGKTLASLGFALDHAIAHGLRRVIYVIPFTSIVEQTVQVFRHALGVQERDDIVLEHHSAFFDDPTKAPQSIDKRKLAMENWDAPIVVTTAVQFFESLFADRPSRCRKLHNIAGSVVVLDEAQTLPHALLRPCVALLDELARNYRVSPVLCTATQPTLRLDQGFAGGLDHVRELVDDPPALYARLRRVQVRHVGTLDDAALTDHLRQREQVLCIVNNRRHARHLFDAIADRPGARHLTTLMHARHRSAVLAELREDLKAGRPCRLVATSLIEAGVDVDFPTVLRVEAGLDSIAQAAGRCNREGLRPVEVSQVQVFTPANPDWAPPKELDLFAEVFRGIERTHRDDLLAMDSVTAYFAELYRRLGDGRLDCEDVLGLLRDADIKGLPLDTLARKFKMIQTTMRPLIVPYAPYAEGCDKEVPEVADILRQLEHAEHLGVAGAARRLQPWLVQVPEQAYRALWQANAIAPVAQARYGEQFVRLVNPRLYDPRCGLRWDDSPQFLAAEALVY
>CP034655.1|AZR32640.1|4606779_4608480_+|hypothetical-protein
MTARFSPADLDRSFLLGITTPSYYARGLVYADQERVTLQTVEPLRVDAIVSGSDDYAVELVWRNGSLRGRCDCPIGQQAEFCKHQVAVALSWARTSADPNSQKRTKRTTAGMPVAESSDRVLQHWLSTLTPQALQALILESADNDAQLRKRLLSQAQLAVAPLQQWRKAISTLLGRKRYMDWSATIAYSKRLSVLPSLLEQARQRDPLAALDLHEYAFKRLLAIYEQVDDSRGDLGERLRVLGHAHLEAARAAGTATLGDRLFKLRMLDQWSLLRPLRDYAALLSATDIARLQHAALEILHARGNRARRLSAESLLEDTARCGGSVDAMLEFFAHTCSSGWDHLEMARRCGEHGRQRQALEWLERGVKADPQDGRLLAALATAYVRDGFPEDALTLRWKAYLLMPNEETYLALQEAASLLDAWEAWRERALQALDTKAVPRFIDAHDTRISLLLAEGQIQRALELAADQTRKLPLGTLEHLLPAAETCDPAAALRICHTMIGMHIERTDRQGYVAAIRLLPTLQRLYQQQGGQGHAAFHAELVRLRQQYRVKRTFIELLHKRFPAP
>CP034655.1|AZR32639.1|4604344_4606576_-|NADP-dependent-isocitrate-dehydrogenase
MSKTPKILYTLTDEAPYLATQSLLPIIDAYTDTAGIVVETRDISLAGRILSLFPEYLSETQKIADDLGELGELATTPEANIIKLPNISASVPQLKAAIKELQGQGYALPAYPDEPKDAAEKDVKARYDKVKGSAVNPVLREGNSDRRAPLSVKNYARKHPHRMGKWSSESKSHVSHMESGDFFGSEQSTTLADAGTLKIEFVGADGSSTVLKDKVAVKAGEIVDAAVLSKRALASFIDAQIADAKARDVLFSVHLKATMMKVSDPVLFGVVVGEFYKDTLSKHADALKSVGFDPNNGIGDLYARIGTLPEDQQAQIKADIQAEYAQRPGLAMVNSDKGITNLHVPSDVIVDASMPAMIRDSGQMWNAQGKLQDTKAVIPDRCYADVYQAVIDDCKAHGAFDPSTMGSVPNVGLMAQKAEEYGSHDKTFQMSAAGTVKVTDGNGKTVFEHAVEAGDLWRMCQVKDAPIQDWVKLAVERARLSETPAVFWLDKARAHDAQVIAKVEQYLKDHDTNGLDIRILPPVDATTFSLERIRKGQDTISVTGNVLRDYLTDLFPIMELGTSAKMLSIVPLMAGGGLFETGAGGSAPKHVQQFVEENCLRWDSLGEFLALAASLEHLGNRYDNPSATVLAKALDVANGQFLDNNKSPARKVGELDNRGSHFYLAMYWAQALAAQTEDTALQAKFAPLAKALTEKEATIVAELNGAQGKPVEIGGYYHPDLAKVSEAMRPSKTFNDILATLKA
>CP034655.1|AZR32638.1|4602967_4603915_-|LysR-family-transcriptional-regulator
MARPPLHALQGFVSAVRLGNLSRAASAMHLTVSALSHQMRALEQRLGYPLLQRHARGVTATLRGQQLLDRIAPHLDTIAEAIEPFGARREDTLTLSLTPSMASAWLVPRLGEFLAIHPTIEINLLSSERLVDFERQQQVDAAMRIGAGQWSGVIAEPLFDEWLVPMASPALIARMGGREAPPLHQWPLLGDPDDAWLRWFAAFGGDAPRRYVAVLDESEAHHRAALDGVGVALGRVTRARLLLESGQLVALSTQRLKTSWSHYLVYPPRSTTHGGFLAFRAWLQGQAREHAAHAQQLTTVPSAVRRRKRSRTLPP
>CP034655.1|AZR32648.1|4620455_4621010_-|hypothetical-protein
MRITSVSSSLALALAGVLAVAGCKKADDDSVSKDPTSGAPTNAMPGPAATPPASDQAAHGSATGAASTDGGAATGSAVTVSSVAVGTQAAADKTVTPATSVGSKDTIIVSVKTDGSASNVALSAKLAYQDGQVAGEQNATLNTTGAETTNLSFSKPDGWPAGTYTAQVMVDGKLAGTPQTIIVK
>CP034655.1|AZR32649.1|4621115_4621409_-|LysM-peptidoglycan-binding-domain-containing-protein
MSVDKKADFSNVTSSVDSTAAVTPAPDFSNVRTSVQSTAQRVEESVTVQAGDSLSSIAKRHLGDGNLWPRIFEANRETLQDPDKIFPGQVLRLPAKS
>CP034655.1|AZR32650.1|4621509_4622325_-|NADPH-dependent-7-cyano-7-deazaguanine-reductase-QueF
MNTPEDSTLGREVAYPSGYDPSLLFPIPRAAGREAIGLSGDLPFIGRDRWHAYELSWLDAQGKPCVATATLHVPCDSPALIESKSLKLYLNSLNATRFNSAEAVRTRIATDLSTRAGADVAVEFGLPPIDAVGEGESIDALDVSIDDYGPPNAAYLAAHAQPVVEEVLTSALLKSNCPVTGQPDWASVTLRYRGAPIDREGLLRYLVSFRDHAEFHEQCVERIFNDVLTQCAPEWLVVEARYTRRGGLDINPLRSSPSVPTPLSFFRDLRQ
>CP034655.1|AZR32651.1|4622483_4623800_-|amidohydrolase
MRPSRLLTSALLLALPTLAAAQTAQRPEVQAAAAPLQAKVVQWRRNFHQHPELSNREERTAATVAAQLRKLGLKPRTGIAHHGVVAIIKGGKPGPMIALRADMDALPVKEQTGLPFASKATADYRGEQVGVMHACGHDAHTAILLGVAEALVGMRDQLPGEVMLIFQPSEEGAPGNEEGGASLMLKEGLFADFKPQAVFGLHVFSSVQAGKIAVRGGPLMAASDRFAIKMIGRQTHGSAPWNGIDPIVASADMIGAAQTVISRRANLSKQPAVLSFGAIKGGIRYNIIPDDVEMVGTIRTFDAGMRQQIFADLKNVAEHTAAAHGAKVEAQVPDQPGNPATVNDPALTAKMLPSLQAVVGADNVYEPPLQMGAEDFSFYAQQVPSMFFFVGSTAKGIDPATAPSNHSPQFLLDESSLDVGLRALLQVSLDYLHQGEAG
>CP034655.1|AZR32652.1|4624058_4625303_+|efflux-RND-transporter-periplasmic-adaptor-subunit
MSRFWKITPLVVAVFVVVFVAMRMMGGGNHGKRAGAPDGNDPDNSGPVPVTVVAASTQDVPVYASALGTVTALNTVTVSPQVGGQLMSLNFKEGQEVKKGDLLAQIDPRTLQASYDQALAAKRQNQALLATSRVNYQRSNDPAYKQYVSRTDLDTQRNQVAQYEAAVAANDAQMRSAQVQLQFTRVTAPIDGIAGIRGVDVGNIVSSSSTIVTLTQIRPIYVSFNLPERELQAVRTGQTAAPLAVAALDRGDAHVISSDGKLDVIDNRISADSGTFGARAIFANTDNALWPGQFVNVRLQLRTITGGTVVPTQSVQRGPDGDYVYVVGSDNTAQMRTVVQGVEVDDSHVQVTKGLKPGERVVTEGQFRLKPGSKVSALKPGETPPEPTEAELKAAKDKQSRAGGAGGRRGGGPR
>CP034655.1|AZR32653.1|4625397_4628646_+|acriflavine-resistance-protein-B
MGFSTIFIRRPIATSLLMAGVLLLGILGYRQLPVSALPEIDAPSLVVTTQYPGANATTMASLVTTPLERQFGQISGLQMMTSDSSAGLSTIILQFSMERDIDIASQDVQAAIRQATLPSSLPYQPVYNRVNPADAAILTLKLTSDSLPLREINRYADAILAQRLSQVPGVGLVSIAGNVRPAVRIQVNPAQLSNMGLTMESLRSALTQTNVSAPKGSLNGKTQSYSIGTNDQLTDAAQYRETIISYKDGRPVRLADVANVVDGVENDQLAAWADGKQAVLLEIRRQPGANIVQTVEQIRNILPQLRSVLPADVHLEVFSDRTETIRVSVHEVKFTLVLTIALVVAVIFVFLRRLWATIIPSVAVPLSLAGTFGVMAFAGMSLDNLSLMALVVATGFVVDDAIVMIENIVRYIEQGKSGPEAAEIGAKQIGFTVLSLTVSLVAVFLPLLLMPGVTGRLFHEFAWVLSIAVVISMLVSLTLTPMMCAYLLKPDALPEGEDAHERATAAGKRNLWTRTVGTYERSLDWVLAHQPLTLAVAIGAVALTVVLYVTIPKGLLPEQDTGLITGVVQADQNVAFPQMEQRTQAVAAALQKDPAVTGVAAFIGAGTMNPTLNQGQLSIVLKTRSDREGLDEVLPRLQKAVVGIPGVALFLKPVQDVTLDTRVAATEYQYSISDVDSSELATWAGRMTEAMRKLPELADVDNNLANQGRALELSIDRDKASMLGVPMQTIDDTLYDSFGQRQISTIFTELNQYRVVLEVAPEFRTSTALMNQLAVASNGSGALTGTNATSFGQVTSSNSSTATGVGAQNTGIVVGAGSIIPLAALAEAKVTNTPLVVSHQQQLPAVTISFNLAPGHSLSQAVAAIEKAREALKIPTQVHAQFVGKAAEFTGSQTDIVWLLLASIVVIYIVLGVLYESYIHPLTIISTLPPAGVGALLALMMCGLSLSVDGIVGIVLLIGIVKKNAIMMIDFAIDARREGANAHDAIRRACLLRFRPIMMTTAAAMLGALPLALGTGIGSELRRPLGIAIVGGLLLSQLVTLYTTPVIYLYMERGGERLRAWRARRAAQRDGITAASTSERSA
>CP034655.1|AZR32654.1|4628761_4631890_+|efflux-RND-transporter-permease-subunit
MNISAPFIKRPIGTSLLAIGLFVIGLMCYLRLGVASLPNIQIPIIFVHATQSGADASTMASTVTAPLERHLGQLPGIDRMRSSSSESSSLVVLVFQSSRKIDSAAQDIQTAINASQSDLPSGLGTPMYSKANPNDDPVIAIALTSDTQSADELYNVADSLLAQRLRQITGISSVDIAGASTPAVRVDVDLRALNALGLTPDNLRNAVRAANVTSPTGFLSDGNTTMAIIANDSVSKAADFAQLAIATQSNGRIVRLGDVATVYDGQQDAYQAAWFNGKRAVVMYAFTRAGANIVETVDQVKAQIPELRSYLQPGTTLTPYFDRTPTIRASLHEVQVTLMISLAMVILTMALFLRRLAPTLIAAVAVPLSLAGSALVMYMLGFTLNNLSLLALVIAIGFVVDNAIVVIENVMRHLDEGMSRMDAALAGAREIGFTIVSITASLVAVFIPMLFASGMIGAFFREFTVTLVAAIVVSMLVSLTLTPALCSRFLSAHAEQEKPSRFGAWLDRMHDRMLRAYTVALDFSLRHALLLSLTPLLLIAATILLGSAVKKGSFPAQDTGLIWGRANSSATVSFADMVSRQRRITDMLMADPAVKTVGARLGSSRQGSSASFNIELKKRDEGRRDTTADVVARLSAKADRYPDLDLRLRAIQDLPSDGGGGTSQGAQYRVSLQGNDLAQLQEWLPKLQAALKKNPRLRDVGTDVDTSGLRQNIVIDRAKAARLGITVGAIDGALYGAFGQRSISTIYSDLNQYSVVVNALPSQTATPKALDQIFVPNRAGQMVPITAVATQVPGLAPPQIIHENQYTTMDLSYNLAPGVSTGEADLIIKSTVDGLRMPDGIRLSGDNSFNVQLSANSMGILLLAAVLTVYIVLGMLYESLIHPVTILSTLPAAGVGALLALFITNTELSVISMIALVLLIGIVKKNAIMMIDFALVAQRVHGMDARAAAREASIVRFRPIMMTTMVAILAAVPLAVGLGEGSELRRPLGIAMIGGLVFSQSLTLLSTPALYVIFSCLSERWKARRARRAERAAARRPAAQAH
>CP034655.1|AZR32655.1|4632196_4632382_+|hypothetical-protein
MADDIGLLWLDRTARSTPRRSPPASKGLPMHITPYLYFEGTCRAAFAHYRHVLGGELMLTT
>CP034655.1|AZR32656.1|4632497_4632713_+|VOC-family-protein
MPPGQQLQGAKPVSVGLGFDDNLEAERAYAALAEGGQIQMPFGETFWAEGFGMCTDRFGVQWLVNGRDRSL
>CP034655.1|AZR32657.1|4632796_4633126_+|glyoxalase
MGFAFNPAYTDENATCLILGENVFTMLLVKPFFQGFSHKGICDTANATETITTLAVSSRAEVDALVSKARATGGRADGEAKDDGFMYQHGFADPDGHLWEVFHSSGAPG

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Crispr_ID: CP034655_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP034655_5

4686016-4686121

Orphan

Consensus_repeat	Method
GGGCACCTTCTCCCGATGGGAGAAGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP034655_5

>merge|CP034655|5|4686016-4686121|CRISPRCasFinder
GGGCACCTTCTCCCGATGGGAGAAGGATTGGTTTTGTTCCTGCTGCATGAGGCTGCGCCCGTAGCCTCATGCGCCCCTTTGGGCACCTTCTCCCGATGGGAGAAGG

>CP034655|5|4|4686016-4686121|CRISPRCasFinder
GGGCACCTTCTCCCGATGGGAGAAGG	ATTGGTTTTGTTCCTGCTGCATGAGGCTGCGCCCGTAGCCTCATGCGCCCCTTT
GGGCACCTTCTCCCGATGGGAGAAGG

Protein	Signature genes	Signature genes Name	Protein_function
CP034655.1\|AZR33087.1\|4681963_4683841_-\|GAF-domain-containing-protein	unknown	unknown	gnl\|CDD\|226702
CP034655.1\|AZR32698.1\|4689684_4690503_+\|sulfite-exporter-TauE/SafE-family-protein	unknown	unknown	gnl\|CDD\|182593
CP034655.1\|AZR32697.1\|4688942_4689332_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235261
CP034655.1\|AZR32699.1\|4690613_4691795_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|370769
CP034655.1\|AZR32688.1\|4666604_4667201_-\|cytochrome-c-oxidase-assembly-protein	unknown	unknown	gnl\|CDD\|235341
CP034655.1\|AZR32693.1\|4683864_4684458_-\|biliverdin-producing-heme-oxygenase	unknown	unknown	gnl\|CDD\|350857
CP034655.1\|AZR32687.1\|4665690_4666566_-\|cytochrome-c-oxidase-subunit-3	unknown	unknown	gnl\|CDD\|238834
CP034655.1\|AZR32691.1\|4668994_4669960_-\|cytochrome-c-oxidase-subunit-II	unknown	unknown	gnl\|CDD\|224537
CP034655.1\|AZR32689.1\|4667197_4667371_-\|hypothetical-protein	unknown	unknown	unknown
CP034655.1\|AZR32700.1\|4691892_4695327_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|227250
CP034655.1\|AZR32692.1\|4670730_4673931_+\|bifunctional-proline-dehydrogenase/L-glutamate-gamma-semialdehyde-dehydrogenase-PutA	unknown	unknown	gnl\|CDD\|237017
CP034655.1\|AZR32695.1\|4686178_4688341_-\|lytic-murein-transglycosylase	unknown	unknown	gnl\|CDD\|274067
CP034655.1\|AZR32701.1\|4695465_4696164_-\|DUF4194-domain-containing-protein	unknown	unknown	gnl\|CDD\|372745
CP034655.1\|AZR32702.1\|4696147_4697620_-\|DUF3375-domain-containing-protein	unknown	unknown	gnl\|CDD\|371764
CP034655.1\|AZR32690.1\|4667351_4668956_-\|cytochrome-c-oxidase-subunit-I	unknown	unknown	gnl\|CDD\|238833
CP034655.1\|AZR32694.1\|4684557_4685823_-\|tetracycline-resistance-MFS-efflux-pump	unknown	unknown	gnl\|CDD\|340946
CP034655.1\|AZR32704.1\|4698203_4699400_-\|chromosome-segregation-protein-SMC	unknown	unknown	gnl\|CDD\|226984
CP034655.1\|AZR32703.1\|4697616_4698204_-\|DUF4276-family-protein	unknown	unknown	gnl\|CDD\|379470
CP034655.1\|AZR32696.1\|4688517_4688724_-\|hypothetical-protein	unknown	unknown	unknown
CP034655.1\|AZR33086.1\|4669976_4670453_-\|DUF2244-domain-containing-protein	unknown	unknown	gnl\|CDD\|378350

Protein	Function_ID	Function_description	E-value
CP034655.1\|AZR33087.1\|4681963_4683841_-\|GAF-domain-containing-protein	gnl\|CDD\|226702	COG4251, COG4251, Bacteriophytochrome (light-regulated signal transduction histidine kinase) [Signal transduction mechanisms].	7.93325e-126
CP034655.1\|AZR32703.1\|4697616_4698204_-\|DUF4276-family-protein	gnl\|CDD\|379470	pfam14103, DUF4276, Domain of unknown function (DUF4276). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and archaea. Proteins in this family are typically between 190 and 224 amino acids in length. There is a single completely conserved residue E that may be functionally important.	4.23545e-16
CP034655.1\|AZR32691.1\|4668994_4669960_-\|cytochrome-c-oxidase-subunit-II	gnl\|CDD\|224537	COG1622, CyoA, Heme/copper-type cytochrome/quinol oxidases, subunit 2 [Energy production and conversion].	1.86524e-72
CP034655.1\|AZR32699.1\|4690613_4691795_-\|hypothetical-protein	gnl\|CDD\|370769	pfam09983, DUF2220, Uncharacterized protein conserved in bacteria C-term(DUF2220). This domain, found in various hypothetical bacterial proteins, has no known function. The family represents just the C-terminus.	5.21177e-52
CP034655.1\|AZR32688.1\|4666604_4667201_-\|cytochrome-c-oxidase-assembly-protein	gnl\|CDD\|235341	PRK05089, PRK05089, cytochrome C oxidase assembly protein; Provisional.	1.28801e-84
CP034655.1\|AZR32693.1\|4683864_4684458_-\|biliverdin-producing-heme-oxygenase	gnl\|CDD\|350857	cd19166, HemeO-bac, heme oxygenase found in pathogenic bacteria. This subfamily contains bacterial heme oxygenase (HO, EC 1.14.14.18), where HO is part of a pathway for iron acquisition from host heme and heme products. Most of these proteins have yet to be characterized. HO catalyzes the rate limiting step in the degradation of heme to biliverdin in a multi-step reaction. HO is essential for recycling of iron from heme which is used as a substrate and cofactor for its own degradation to biliverdin, iron, and carbon monoxide. This family includes heme oxygenase (pa-HO) from Pseudomonas aeruginosa, an opportunistic pathogen that causes a variety of systemic infections, particularly in those afflicted with cystic fibrosis, as well as cancer and AIDS patients who are immunosuppressed. Pa-HO, expressed by the PigA gene, is critical for the acquisition of host iron since there is essentially no free iron in mammals, and is unusual since it hydroxylates heme predominantly at the delta-meso heme carbon, while all other well-studied HOs hydroxylate the alpha-meso carbon. Also included in this family is Neisseria meningitidis HO which is substantially different from the human HO, with the reaction product being ferric biliverdin IXalpha rather than reduced iron and free biliverdin IXalpha. HO shares tertiary structure similarity to methane monooxygenase (EC 1.14.13.25), ribonucleotide reductase (EC 1.17.4.1) and thiaminase II (EC 3.5.99.2), but shares little sequence homology.	5.06931e-44
CP034655.1\|AZR32687.1\|4665690_4666566_-\|cytochrome-c-oxidase-subunit-3	gnl\|CDD\|238834	cd01665, Cyt_c_Oxidase_III, Cytochrome c oxidase subunit III. Cytochrome c oxidase (CcO), the terminal oxidase in the respiratory chains of eukaryotes and most bacteria, is a multi-chain transmembrane protein located in the inner membrane of mitochondria and the cell membrane of prokaryotes. CcO catalyzes the reduction of O2 and simultaneously pumps protons across the membrane. The number of subunits varies from three to five in bacteria and up to 13 in mammalian mitochondria. Only subunits I and II are essential for function, but subunit III, which is also conserved, is believed to play a role in assembly of the multimer complex. Rhodobacter CcO subunit III stabilizes the integrity of the binuclear center in subunit I. Subunits I, II, and III of mammalian CcO are encoded within the mitochondrial genome and the remaining 10 subunits are encoded within the nuclear genome. Subunit III contains bound phospholipids in several crystal structures and is proposed to contain a "lipid pool." These phospholipids are believed to intrinsic constituents similar to cofactors of the enzyme.	3.55731e-92
CP034655.1\|AZR32697.1\|4688942_4689332_-\|hypothetical-protein	gnl\|CDD\|235261	PRK04233, PRK04233, hypothetical protein; Provisional.	1.12833e-80
CP034655.1\|AZR32698.1\|4689684_4690503_+\|sulfite-exporter-TauE/SafE-family-protein	gnl\|CDD\|182593	PRK10621, PRK10621, hypothetical protein; Provisional.	5.74323e-36
CP034655.1\|AZR32700.1\|4691892_4695327_-\|ATP-binding-protein	gnl\|CDD\|227250	COG4913, COG4913, Uncharacterized protein conserved in bacteria [Function unknown].	2.8273e-178
CP034655.1\|AZR32692.1\|4670730_4673931_+\|bifunctional-proline-dehydrogenase/L-glutamate-gamma-semialdehyde-dehydrogenase-PutA	gnl\|CDD\|237017	PRK11904, PRK11904, bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA.	0
CP034655.1\|AZR32695.1\|4686178_4688341_-\|lytic-murein-transglycosylase	gnl\|CDD\|274067	TIGR02283, Membrane-bound_lytic_murein_transglycosylase_B, lytic murein transglycosylase. Members of this family are closely related to the MltB family lytic murein transglycosylases described by TIGR02282 and are likewise all proteobacterial, although that family and this one form clearly distinct clades. Several species have one member of each family. Many members of this family (unlike the MltB family) contain an additional C-terminal domain, a putative peptidoglycan binding domain (pfam01471), not included in region described by this model. Many sequences appear to contain N-terminal lipoprotein attachment sites, as does E. coli MltB in TIGR02282. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan].	5.81578e-139
CP034655.1\|AZR32701.1\|4695465_4696164_-\|DUF4194-domain-containing-protein	gnl\|CDD\|372745	pfam13835, DUF4194, Domain of unknown function (DUF4194).	6.93529e-46
CP034655.1\|AZR32702.1\|4696147_4697620_-\|DUF3375-domain-containing-protein	gnl\|CDD\|371764	pfam11855, DUF3375, Protein of unknown function (DUF3375). This family of proteins are functionally uncharacterized. This protein is found in bacteria. Proteins in this family are typically between 479 to 499 amino acids in length.	7.06662e-142
CP034655.1\|AZR32690.1\|4667351_4668956_-\|cytochrome-c-oxidase-subunit-I	gnl\|CDD\|238833	cd01663, Cyt_c_Oxidase_I, Cytochrome C oxidase subunit I. Cytochrome c oxidase (CcO), the terminal oxidase in the respiratory chains of eukaryotes and most bacteria, is a multi-chain transmembrane protein located in the inner membrane of mitochondria and the cell membrane of prokaryotes. It catalyzes the reduction of O2 and simultaneously pumps protons across the membrane. The number of subunits varies from three to five in bacteria and up to 13 in mammalian mitochondria. Only subunits I and II are essential for function, but subunit III, which is also conserved, may play a role in assembly or oxygen delivery to the active site. Subunits I, II, and III of mammalian CcO are encoded within the mitochondrial genome and the remaining 10 subunits are encoded within the nuclear genome. Subunit I contains a heme-copper binuclear center (the active site where O2 is reduced to water) formed by a high-spin heme (heme a3) and a copper ion (CuB). It also contains a low-spin heme (heme a), believed to participate in the transfer of electrons to the binuclear center. For every reduction of an O2 molecule, eight protons are taken from the inside aqueous compartment and four electrons are taken from cytochrome c on the opposite side of the membrane. The four electrons and four of the protons are used in the reduction of O2; the four remaining protons are pumped across the membrane. This charge separation of four charges contributes to the electrochemical gradient used for ATP synthesis. Two proton channels, the D-pathway and K-pathway, leading to the binuclear center have been identified in subunit I. A well-defined pathway for the transfer of pumped protons beyond the binuclear center has not been identified. Electrons are transferred from cytochrome c (the electron donor) to heme a via the CuA binuclear site in subunit II, and directly from heme a to the binuclear center.	0
CP034655.1\|AZR32694.1\|4684557_4685823_-\|tetracycline-resistance-MFS-efflux-pump	gnl\|CDD\|340946	cd17388, MFS_TetA, Tetracycline resistance protein TetA and related proteins of the Major Facilitator Superfamily of transporters. This subfamily is composed of tetracycline resistance proteins similar to Escherichia coli TetA(A), TetA(B), and TetA(E), which are metal-tetracycline/H(+) antiporters that confer resistance to tetracycline by an active tetracycline efflux, which is an energy-dependent process that decreases the accumulation of the antibiotic in cells. TetA-like tetracycline resistance proteins belongs to the Eukaryotic Solute carrier 46 (SLC46)/Bacterial Tetracycline resistance (TetA) -like (SLC46/TetA-like) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	5.92711e-130
CP034655.1\|AZR32704.1\|4698203_4699400_-\|chromosome-segregation-protein-SMC	gnl\|CDD\|226984	COG4637, COG4637, Predicted ATPase [General function prediction only].	2.88694e-105
CP034655.1\|AZR33086.1\|4669976_4670453_-\|DUF2244-domain-containing-protein	gnl\|CDD\|378350	pfam10003, DUF2244, Integral membrane protein (DUF2244). This domain, found in various bacterial hypothetical and putative membrane proteins, has no known function.	1.72947e-30

>CP034655.1|AZR32694.1|4684557_4685823_-|tetracycline-resistance-MFS-efflux-pump
MSLSPDSAPIPGRRRAALIFIFITVLIDVLSFGVIIPVLPDLVRHFTGGDYVVAAGWIGWFGFLFAAIQFVCSPLQGALSDRFGRRPVILLSCLGLGLDFILMAIAHSLPMLLLARVISGVCSASFSTANAYIADVTPADKRAGAFGMLGAAFGIGFVAGPLIGGWLGSMGLRWPFWFAAGLALLNVLYGWFVLPESLPVERRTARLEWSHANPLGALKLLRRYPQVFGLASVVFLANLAHYVYPSIFVLFAGYQYHWGPREVSWVLAGVGVCSIIVNVLLVGRLVRWLGERRALLLGLGCGVIGFVIYGLADSGAAFLIGVPISALWALAAPSAQALITREVGADAQGRVQGALTGLVSLAGIAGPLLFANVFAWFIGSGAPLHLPGAPWLLAGVLLAAGWAMAWRRAGRGAGTAPAAQA
>CP034655.1|AZR32693.1|4683864_4684458_-|biliverdin-producing-heme-oxygenase
MPSHALAVPPSAALALRHATQDAHRLVEAVPLMQALGQGQIDSAAYAQILRRHHGLLAGFEAQLSDWLTTLVGNGWHYRRRVPALREDLRALGQQPDLPVALPSVADDAARWGMLYVIEGSQLGGRMIARSVRKQQPALAGALRYFELADDDPAGWRRFQAALERRLDTPSARDAAIDGAQAMFAHFHTCLAAEPHP
>CP034655.1|AZR33087.1|4681963_4683841_-|GAF-domain-containing-protein
MDVCAREPIHIPGLIQPYGVLLVIEPADGRIVQASSTAAELLGVPMDALLGMAYTRVLELPDAQPYAVDDQPQHLLHADVHFPQRSAPTDHPWVAAWHLYPEQWLIEIEPRDARLMDVTLREALPLLRSIERDSVIEEAAVRAAKGLRSMIGFDRVMVYRFDEEWNGDVIAEARQPELEAYLGLHYPASDIPAQARALYLRNRVRQIADVRYQPSPIQPTLHPRLGTPVDLSDVSLRSVSPVHLEYLANMGVSATLVSSIVVNDALWGLISCHHYSPHFTSHAMRDATDAVTRALAGRIGALQAVGRARLESVLLTIREKLITDFNDAEHLTVDMLADMAPDLMDVVDADGVAIFHGNEISRHGSVPDAEALRRIREHLESEHHDALREDAVGALHVDAIGEVFPDLADLAPLAAGFIFVPLMPQSRSALLWTRREQVQQVKWAGNPQLAKLQDIPNSRLSPRKSFDLWQQTVRGRARRWSPLHLESARSLRVLIELMERKRFQQDFTLLEASLSRLRDGVAIIERGANAAAHRLMFVNPAFAELSQTEVADLIGCDILALLADDAARGKVELLEDALRLGRAAYVTLPLSTQDGEPAYRQFHLEPLPSPSGVTAHWLLQLRDPE
>CP034655.1|AZR32692.1|4670730_4673931_+|bifunctional-proline-dehydrogenase/L-glutamate-gamma-semialdehyde-dehydrogenase-PutA
MNAQLDPLASTSVARPLLAPELPAAPGALRAAITAAWLKDETEHVRELLDQARLPAAEQAKVQAIAADLVTRVRARAQDQGAIEAFMRQYDLGSEEGVLLMCVAEALLRIPDQDTADKLIRDKLGDADWKKHMGGSDSVLVNASTWGLMLTGQLVQLNDLTRADVPGAFKRLIGRVGEPVIRLAVRQAMKIMGHQFVMGRTIGEALSRSRKGDNANYRYSFDMLGEGALTMKDAQRYLQAYRDAIHAIGRSGKFVGTDVFAAPSISIKLSALYPRYEHAKRARVMAELVPGVLELAQLAKSYGIGYTVDAEEADRLELSLDIIEATFSDPSLDGWEGYGLAVQAYQKRTPYTIDFLADLARRVGRRIPVRLVKGAYWDAEIKRAQIEGHPGYPVFTRKQNTDVSYLACARRMFAHNDALYPMFATHNAQTIAAVRAIAAGKTYEHQKLHGMGDDLYAEVIPADRLGLPCRVYAPVGSHEDLLPYLVRRLLENGANSSFVNRITDEDVAIEDLIRDPVEAVSSFTSIPHPKIPLPADLLRSQNQNRKNSMGANLANDNDLRQLAEQLNAAIKPWKATPLVPGALISTPSQAVLNPADRRETVGQWHPADPDTVQKSLVSAAAAQPGWNRTPAASRATILEHAADLLEARMPEFMTICVKEAGKTLPDAVAEVREAVDFLRYYAGQARAQFGAPERLPGPTGESNELQLHGRGVFVCISPWNFPLAIFLGQVAAALAAGNTVIAKPAEQTNLIGFAAVKLLHEAGVPEAAVQFLPGDGATVGAALTNDPRVAGVAFTGSTETARIINRTLAARDAAIGVLIAETGGQNAFIADSSSLPEAVVKDAISSAFISAGQRCSAARVLFVQDDIADKVMTMLAGAMGELKIGDPSLLSTDVGPVIDADALKILDYHAARMDREARLIGTTTLDGGTAHGSFFAPRAYELTSLAQLQREIFGPVLHVIRWKADQLDAVIDQINATGYGLTLGVHSRIDETIDRITSRVAVGNVYVNRNQIGAVVGVQPFGGQGLSGTGPKAGGPHYLLRFATEKVVTVNTTAAGGNASLLTLGD
>CP034655.1|AZR33086.1|4669976_4670453_-|DUF2244-domain-containing-protein
MIEVLPLMSEGVGTQLRLRPPRALSARQFVQLFAVLAGMMWLFAGLGWWTGNAFAPVFALVHSGVVALALRTLWRSGEREEAIRVEETVVEVFPSGHAPPAFQAHPHWVRLCMERDDRVLLVSSGKQIEIGSFLGPAERVELATTLKRLLAAANGRHR
>CP034655.1|AZR32691.1|4668994_4669960_-|cytochrome-c-oxidase-subunit-II
MTQRSSSKSMSTYTHVGLAMAALLSAPAAGAQSADPKEWQLNMGRGVTQTARMAYEAHMVALWVCVVIGALVFGAMGYAIFKFRKSKGAVAAQFSHNTTAEVLWTVIPVLVLIAMAWPATAKLIAMYDTRESEMTVKVTGYQWMWKYEYLGQGVEFTSRLARESDRIRQSGERPTAASQPHYLLDADNRLVLPVNTKIRFVITADDVIHAWWVPALGWKQDAIPGIVNEAWTNIEQPGVYRGQCAELCGKDHGFMPIVVEALPKAEFQRWLASRRSAAGTAPAAAPAGPTAAPPSAAPATPAGDTAPAAAPAPAATPTAAL
>CP034655.1|AZR32690.1|4667351_4668956_-|cytochrome-c-oxidase-subunit-I
MAHTAVDHHGHHQPGFVERWFFSTNHKDIGTLYLLFSFVMFIIGAAMSVVIRAELMQPGLQFVKPEFFNQMTTVHALVMIFGGVMPAFVGLANWMIPLQIGAPDMALPRMNNWSFWLLPVAFTLLLLTLFLPGGAPAGGWTLYPPLSLQGGYNVAFSVFAIHVAGVSSIMGAINIIATVLNMRAPGIDLLKMPIFCWAWLITAFLLIAVMPVLAGAVTMLLTDKFFGTSFFNAAGGGDPVMYQHIFWFFGHPEVYIMILPAFGVVSEIIPTFSRKPLFGYQAMVYAIAAIAFLSFIVWAHHMFTVGMPLGGEIYFMFATMLISIPTGVKVFNWVSTMWKGSLTFESPMLWAVAFVILFSIGGFSGLMLAIVPADFQYHDTYFVVAHFHYVLVTGAVFALIAAVYYWWPKWTGRMYNETWAKVHFWWTMVFVNLLFFPQHFLGLAGMPRRIPDYNVVFADWNLVSSIGAFGMFATPFLMAAILLSSLRSGARADARAWEGAKGLEWTVPSPAPAHTFTVPPLIKPGDLAHEDLGH
>CP034655.1|AZR32689.1|4667197_4667371_-|hypothetical-protein
MKTSVTESASEPAVTRLLSAAERQAQQRRAVRRTAITVGIIALLIYAGFIASGVIGR
>CP034655.1|AZR32688.1|4666604_4667201_-|cytochrome-c-oxidase-assembly-protein
MNARPHTHAPTAGLFKLLGVVLGVFVLTFSLVPLYRIACEKVFGIRMERAPGSSRANAGAPPAAGRRTVRVEFDGGVNSRLPWTFHPEQMTMDVVPGELNEALYFARNDGARAVVGSAVPSVAPARASGYFNKTECFCFTAQTLQAGETRDMPLRFIVDPALPPEVTTITLSYTFYRNDALTSELQGGGTSAAPRAAP
>CP034655.1|AZR32687.1|4665690_4666566_-|cytochrome-c-oxidase-subunit-3
MADHSPNADAYFVPSQSKWPFVGSIAMFVMMIGVASWLNDAAWGRWTFFAGVAMLLATLFMWFGDVIRESNAGHYNRQVDGSFRMGMVWFIFSEVMFFCAFFGALFYTRVLTLPWLGGEGDGVMTNELLWNGYSAAWPTNGPGTIGGQFQTIPAWGLPLINTLILLSSGVTLTIAHHALKGGRRGALLLWLGLTVLLGCVFLFLQAEEYIHAYTELNLTLGSGIYGSTFFMLTGFHGMHVLLGTIMLAVMWLRAAKGHFTRDNHFAFEAAAWYWHFVDVVWLALFLFVYVL
>CP034655.1|AZR32695.1|4686178_4688341_-|lytic-murein-transglycosylase
MTLPRCALPLVLGLLPLAACADPAFDRCLAGLQSQAAAKGVDAASFQRFTAGLVPDPSVLPLLDAQPEFTTPIWDYLASLVDSQRVTDGQAMLVTHRELLSRLSEQTGVDPATIVAVWGVESDYGRVTGKRPLLVSLATLSCAGRRQPFFRGEFLALLSLLQQGDLSADGLTGSWAGAFGQTQFMPSTYARIAVDGDGDGRRDLVASIPDALASTANYLVKAGWERARPWGMEVTLPRGFDASKAGRTRRQPLQAWQTAGLLGTDGKPLAPTGLPAETPAALLLPAGATGPAFLVFRNYDAIYAYNAAESYALSIALLADRLRGGPGLVAAWPTDDPGLGRPERRELQQLLLARGHQIGEADGMVGSATRRAIQVEQTRLGLQPADGRPGQRILTALRAAPPVAGAAAIRATAFKLPAAYPAFAQSPIVHKASPMSDITGLTTGDFHGFPSLLIDTPFSTAAISLFGGQLVSFVPKGGQDVMWLSPSAQQPPTPIRGGAPVCWPYFGRQDQTGDVPAHGFVRTVAWQLTESRREDDGTVVLTLTPPRLDDLALRLRMTLRIGRTLEQRLITENISGASVRFTQALHNYFHVGDALNVSVQGLDGLDYLDKYENYATAHRQQGDWSLRDPRDPGRSDRIYTNAGGRYTLTDPVLGRRIVIATEGSRSLVVWNPGEEAGKKMADVGDGWRDYVCLEAANAGPDVIELAPGASHTLSQTISVE
>CP034655.1|AZR32696.1|4688517_4688724_-|hypothetical-protein
MATLNLWQWAILAAVVFAIVLPACVATALIRFGPRHDAPRRARTRRLAESAPSAPALSLLTGIAGESS
>CP034655.1|AZR32697.1|4688942_4689332_-|hypothetical-protein
MPTSTPPDPCPCGRPADYARCCGPYHSGTAAPDAQTLMRARYSAYVRRDAAYLLASWHPSTRPAELSLDEGGRTTWLGLTVQRTLDTGPDTAEVVFLARYRIGGGSAVRMTEHSRFVREGGHWYYLDAR
>CP034655.1|AZR32698.1|4689684_4690503_+|sulfite-exporter-TauE/SafE-family-protein
MRCVYAGGPVLRSVTLLELIPTELPWLLCIAFVAGLVDAAVGGGGLIQLPGLFATLPQQAPSLILGTNKFSAMFGTGASAWRYARNVRFPWRPVLYATAAAFTFSFLGATAVSLMPKQAVRPLILLLLIAMLIYTLIKKDFGALHRPRDIGRRELATALAMGAAIGFYDGFFGPGTGSFLIFLFIRFFGLDFLRASAAAKVVNLATNLAALSFFLPSGQVMLAIGIPMAAANVAGAVAGTRMALRGGTPLIRKLFLVLVIVLIGKMGWDLLH
>CP034655.1|AZR32699.1|4690613_4691795_-|hypothetical-protein
MTAAAPMLLPEAALRALRGQWQRARGQWLIGEGAPQAIGLRAPTQAQAIARFDAFGAWLQQWSRTGLPGRVEYRAVSWTQLGPQRLPQAWMLDDASQAAAALGEGERWARARQRSAALQARWPQAVALAARLRRQFDLLADWPEADFARLVAVVEWLHQHRDSGLFLRQLPIAGIDSKWIEPHRGVIADWLAALRGIAEPRSFASLSGLRSAPDRVRLRLLDPALRHHLGGLEDINAPITQIAALRLPARRVLIVENRETGLACESLPGTLVLMARGYAIEYVSSIEWLRGLPLYYWGDIDTHGLAILHRLRTHAPHTTAVLMDEATLHATPRALWGHERRQHRAQHLDALSIQEQRLYADLRGGRFGPSPRLEQERIAWDYAWPRIQAALAD
>CP034655.1|AZR32700.1|4691892_4695327_-|ATP-binding-protein
MKSSSSSLFADDLPDPRVQQFRMRRLQVHNWGTFNGLTDVPIAAKGFLFVGRSGSGKSTLLDAMSALLTPPNLVDFNAAAREAERSGRDRNLVSYVRGAWADQQDSASGEIATQYLRKGSTWTALVLEYRNGEGRVISLIRLFWIAGSGAAAADVRKHYMVAERSFDIASELVGFDLDLRKLKARLGDDIAHFDNFSGYAERFRHQLGIANEMALRLLHKTQSAKNLGDLNVFLRGFMLEAPKTFDASERLVGDFAELDGAHRAVVTARRQVETLLPARAHYDDLQSVQRQRGRLQELKLGLDPYREQRRLALLDARLHALDVNDQGLAGEEGQRRAAVDNHQQRLSDLEAQRRSQGGERIDALEREQLQVQGELARRSDKRVRAEQACRQLDQSLADNAHGFAEQSAQARAALEDGQRLAAEQDEVIGERIAGKREDSQRFAQVRAEIEALTRNPSNIAAPMQALRARLSEETGIPEAALPFVGELIQVREGDVAWRGAIERVLHGFAQSLLVDERHYAELAEWVNRTHLGSRLVYYRVRNNEQAFAGREPGSASLLHKLQLREHPFAGWLRRELGKRFDYDCLESAKALRTAERAITREGQVKHPGERYEKDDRHAVGDRRRWLLGFDNRDKLALYEREAIELAQRIAACDADVAALRARRERDASRRLAQHTLANLGWEEIDVAAQLQRGDDIASALRKLREGDANLRALGEAIERTRGDLEQAKRTFDGVREERIALGVERTRLEKQRLQCADADTRVVTPLQREGLEERLANLGALSLDNLEAHFRQIGNAIAEQTSASDSEHNRLEQLLLGCFRRYSQQWPEDSGDFIISLAGAEDFLARLQRLERDGLPQHEARFFELLQSQSKNNLLALQRHTAEARKSIAQRLDEVNASLEQVPFNHGTLLTIELSDRRLPEVIDFHQRLRDVLGHHQTEQRDVAEQQFAVLRELVRKLGSADGDDKRWRELVLDVRLHVEFVGVELDAATRQQVEIYRSGAGKSGGQRQKLATTCLAAALRYQLGGEDGELPRYAAVVLDEAFDKADNEFTALAMNIFENFGFQMVVATPLKSVMTLEPFIGGACFVEISGRHDSGVLLIEYDEQARRLKLPERSRSAAAAAGAARATEPSADAIGAASADGLH
>CP034655.1|AZR32701.1|4695465_4696164_-|DUF4194-domain-containing-protein
MNWQADNVETDEPAPSAHADAAAPEADAATGLFPGDSGALPVDARRVLCQLLAGPSVDVQRHSKLWPALLRHEAAVRSRLAELFLELVLDRDAGVAFTRQADTGELEAPVLLRSLPLTFIDSVLLLHLRQQLAEADARGVRAVVEDAPLSEALAVYEKNLSTDRAGFMRRIGNAIQKMKDNHVLTRLRGDDNRYEVSPTLKLLFSAEDVSALAQIYRQLREQPGTVGDAEHA
>CP034655.1|AZR32702.1|4696147_4697620_-|DUF3375-domain-containing-protein
MKHRARIARYRALREQPLWKLLAADQSPEVIGLLQTLLLDSERGLPAAVLHERLQRMLDDLNVDQLSRELPRTAQDYVAHWLAQGWLERRLPEGAQQEQYELSTQAMQAIRFADGLEQARGAATESRLALVMQQLSQLAALTETNPDARLSALRDERDRIDAEIARVAAGKVASLDGKRALERARQVIALADELTEDFRRVRDDFEQLNRQFRERIIDDEGERGEVLTRLFEGVDVIGDSEAGRSFQAFWALLNDAEQSAQLDAALETVLARAFARKLDRRERSFLRGLTGTMLERGGQVHDVMQHFARSLRGFVQSRGYLEQRRLNQLLKQAQAEALGLREHLRAQRSVGHDLNLTTSRLRSLSQWRLHDPRQTQVDSSIQRNDAAAISLDSVGDLVAQSEIDFRSLRRDLYELLGEHAQLSIAQVLAQRQAEQGLGSVIGYLSLGTRHGQVDVQRSEIARWLGGDGQWRGARIPLVWFSQEKRNELAG
>CP034655.1|AZR32703.1|4697616_4698204_-|DUF4276-family-protein
MHGRIIFLLEEPSMKVLLDGLLPRLFPGWQESRDFQCIPHDGKSDLERSVRRKLNAWRVPGDRFVVVRDTDSADCLSLKARLLQLCSQHGRPDALVRLVCQELESWYIADLNALALAFPECRIDTPALRKRFAQPDNWNKPSAELERLIPVFQKRSGARLMADHLREEDSRSPSFRAFVNGVRRLAHELGYQAPA
>CP034655.1|AZR32704.1|4698203_4699400_-|chromosome-segregation-protein-SMC
MQIESIEIKNFRLFRNAKLTHVPRLCVLVGANGTGKSTLFDVFSFLKDALSMNVGKAIAKRGGYKEVASRGFAHEPIEFTLQFRLEITGRERLVTYVLKIAPATGTRVEIERELLRYKRGSYGAPFRFLDFAHGKGYAITNEEEFSKKDEELTREEQELDAPDILAIKGLGQFERFKAASAFRLMIENWHVSDFHVSEARPSQEEGFAEHLSTRGDNLPLVANFLYENHRDRFDRVLQAMNRRVPGVSVVQPTQTLDGRLILRFQDGSFKDPFIARYVSDGTIKMFAYLVLLNDPKPYPLLAVEEPENQLYPELLPELAEEFRGYARRGGQVFISTHSPDFLNALTLGEIYCLRKEKGFTTITRASDSENLRALFEAGDLPRYLWKQGLFEGLNREVA

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP034655_4	4.44\|4619861\|38\|CP034655\|PILER-CR,CRISPRCasFinder,CRT	4619861-4619898	38	NZ_CP017325	Xanthomonas campestris pv. campestris str. CN15 plasmid unnamed1, complete sequence	19982-20019	1	0.974
CP034655_4	4.44\|4619861\|38\|CP034655\|PILER-CR,CRISPRCasFinder,CRT	4619861-4619898	38	NZ_CP034656	Xanthomonas campestris pv. musacearum NCPPB 4379 plasmid pXCM49, complete sequence	10448-10485	1	0.974
CP034655_4	4.44\|4619861\|38\|CP034655\|PILER-CR,CRISPRCasFinder,CRT	4619861-4619898	38	NZ_LN811400	Xanthomonas campestris pv. campestris isolate B-1459 plasmid I, complete sequence	28648-28685	1	0.974
CP034655_4	4.44\|4619861\|38\|CP034655\|PILER-CR,CRISPRCasFinder,CRT	4619861-4619898	38	NZ_CP017318	Xanthomonas campestris pv. campestris str. CN14 plasmid unnamed, complete sequence	6659-6696	1	0.974
CP034655_4	4.44\|4619861\|38\|CP034655\|PILER-CR,CRISPRCasFinder,CRT	4619861-4619898	38	AP019683	Xanthomonas campestris pv. campestris MAFF106712 pXcc1 plasmid DNA, complete genome	31561-31598	1	0.974
CP034655_4	4.46\|4619996\|35\|CP034655\|PILER-CR,CRISPRCasFinder,CRT	4619996-4620030	35	NZ_LN811400	Xanthomonas campestris pv. campestris isolate B-1459 plasmid I, complete sequence	30501-30535	1	0.971
CP034655_4	4.46\|4619996\|35\|CP034655\|PILER-CR,CRISPRCasFinder,CRT	4619996-4620030	35	NZ_CP018734	Xanthomonas gardneri strain ICMP 7383 plasmid pICMP7383.3, complete sequence	44750-44784	1	0.971
CP034655_4	4.47\|4620062\|37\|CP034655\|PILER-CR,CRISPRCasFinder,CRT	4620062-4620098	37	NZ_CP020884	Xanthomonas citri pv. citri strain TX160042 plasmid unnamed2, complete sequence	31489-31525	1	0.973
CP034655_4	4.47\|4620062\|37\|CP034655\|PILER-CR,CRISPRCasFinder,CRT	4620062-4620098	37	CP030168	Xanthomonas citri pv. punicae strain LMG7504 plasmid unnamed2, complete sequence	34976-35012	1	0.973
CP034655_4	4.47\|4620062\|37\|CP034655\|PILER-CR,CRISPRCasFinder,CRT	4620062-4620098	37	NZ_CP020891	Xanthomonas citri pv. citri strain TX160197 plasmid unnamed2, complete sequence	25266-25302	1	0.973
CP034655_4	4.9\|4617555\|35\|CP034655\|PILER-CR,CRISPRCasFinder,CRT	4617555-4617589	35	NC_019933	Xanthomonas phage CP1 DNA, complete genome	43723-43757	2	0.943
CP034655_4	4.31\|4619004\|34\|CP034655\|PILER-CR,CRISPRCasFinder,CRT	4619004-4619037	34	MK512531	Xanthomonas phage Cf2, complete genome	2163-2196	2	0.941
CP034655_4	4.44\|4619861\|38\|CP034655\|PILER-CR,CRISPRCasFinder,CRT	4619861-4619898	38	NZ_CP020891	Xanthomonas citri pv. citri strain TX160197 plasmid unnamed2, complete sequence	22408-22445	2	0.947
CP034655_4	4.44\|4619861\|38\|CP034655\|PILER-CR,CRISPRCasFinder,CRT	4619861-4619898	38	NZ_CP018469	Xanthomonas vesicatoria strain LM159 plasmid pLM159.3, complete sequence	9831-9868	2	0.947
CP034655_4	4.44\|4619861\|38\|CP034655\|PILER-CR,CRISPRCasFinder,CRT	4619861-4619898	38	NZ_CP018466	Xanthomonas euvesicatoria strain LMG930 plasmid pLMG930.3, complete sequence	19655-19692	2	0.947
CP034655_4	4.44\|4619861\|38\|CP034655\|PILER-CR,CRISPRCasFinder,CRT	4619861-4619898	38	NZ_CP020884	Xanthomonas citri pv. citri strain TX160042 plasmid unnamed2, complete sequence	34346-34383	2	0.947
CP034655_4	4.44\|4619861\|38\|CP034655\|PILER-CR,CRISPRCasFinder,CRT	4619861-4619898	38	CP030168	Xanthomonas citri pv. punicae strain LMG7504 plasmid unnamed2, complete sequence	37821-37858	2	0.947
CP034655_4	4.44\|4619861\|38\|CP034655\|PILER-CR,CRISPRCasFinder,CRT	4619861-4619898	38	NZ_CP018727	Xanthomonas vesicatoria ATCC 35937 strain LMG911 plasmid pLMG911.2, complete sequence	9924-9961	2	0.947
CP034655_4	4.46\|4619996\|35\|CP034655\|PILER-CR,CRISPRCasFinder,CRT	4619996-4620030	35	NZ_CP018474	Xanthomonas perforans strain LH3 plasmid pLH3.3, complete sequence	42411-42445	2	0.943
CP034655_4	4.46\|4619996\|35\|CP034655\|PILER-CR,CRISPRCasFinder,CRT	4619996-4620030	35	NZ_CP017325	Xanthomonas campestris pv. campestris str. CN15 plasmid unnamed1, complete sequence	21796-21830	2	0.943
CP034655_4	4.46\|4619996\|35\|CP034655\|PILER-CR,CRISPRCasFinder,CRT	4619996-4620030	35	NZ_CP017325	Xanthomonas campestris pv. campestris str. CN15 plasmid unnamed1, complete sequence	34332-34366	2	0.943
CP034655_4	4.46\|4619996\|35\|CP034655\|PILER-CR,CRISPRCasFinder,CRT	4619996-4620030	35	NZ_CP017318	Xanthomonas campestris pv. campestris str. CN14 plasmid unnamed, complete sequence	8470-8504	2	0.943
CP034655_4	4.46\|4619996\|35\|CP034655\|PILER-CR,CRISPRCasFinder,CRT	4619996-4620030	35	NZ_CP018730	Xanthomonas gardneri strain JS749-3 plasmid pJS749-3.2, complete sequence	37789-37823	2	0.943
CP034655_4	4.46\|4619996\|35\|CP034655\|PILER-CR,CRISPRCasFinder,CRT	4619996-4620030	35	AP019683	Xanthomonas campestris pv. campestris MAFF106712 pXcc1 plasmid DNA, complete genome	29711-29745	2	0.943
CP034655_1	1.2\|26003\|25\|CP034655\|PILER-CR	26003-26027	25	NZ_CP010990	Pseudonocardia sp. EC080625-04 plasmid pFRP1-1, complete sequence	131716-131740	3	0.88
CP034655_1	1.2\|26003\|25\|CP034655\|PILER-CR	26003-26027	25	NZ_CP012186	Pseudonocardia sp. EC080619-01 plasmid pBCI1-1, complete sequence	52863-52887	3	0.88
CP034655_1	1.2\|26003\|25\|CP034655\|PILER-CR	26003-26027	25	NC_015314	Pseudonocardia dioxanivorans CB1190 plasmid pPSED01, complete sequence	177273-177297	3	0.88
CP034655_4	4.30\|4618938\|35\|CP034655\|PILER-CR,CRISPRCasFinder,CRT	4618938-4618972	35	MK512531	Xanthomonas phage Cf2, complete genome	4059-4093	3	0.914
CP034655_4	4.44\|4619861\|38\|CP034655\|PILER-CR,CRISPRCasFinder,CRT	4619861-4619898	38	NZ_CP011166	Xanthomonas citri pv. aurantifolii strain FDC 1609 plasmid pXfc46, complete sequence	39844-39881	3	0.921
CP034655_4	4.44\|4619861\|38\|CP034655\|PILER-CR,CRISPRCasFinder,CRT	4619861-4619898	38	NZ_CP020965	Xanthomonas phaseoli pv. phaseoli strain CFBP412 plasmid pA, complete sequence	21900-21937	3	0.921
CP034655_4	4.44\|4619861\|38\|CP034655\|PILER-CR,CRISPRCasFinder,CRT	4619861-4619898	38	NZ_CP020976	Xanthomonas phaseoli pv. phaseoli strain CFBP6982 plasmid pA	24707-24744	3	0.921
CP034655_1	1.2\|26003\|25\|CP034655\|PILER-CR	26003-26027	25	NZ_CP049358	Deinococcus wulumuqiensis R12 plasmid unnamed1, complete sequence	208559-208583	4	0.84
CP034655_1	1.2\|26003\|25\|CP034655\|PILER-CR	26003-26027	25	NZ_CP049157	Caballeronia sp. SBC1 plasmid pSBC1_1, complete sequence	1640677-1640701	4	0.84
CP034655_1	1.2\|26003\|25\|CP034655\|PILER-CR	26003-26027	25	NZ_CP009855	UNVERIFIED_ORG: Enterobacter cloacae strain ECNIH5 plasmid pENT-22e, complete sequence	30498-30522	4	0.84
CP034655_1	1.2\|26003\|25\|CP034655\|PILER-CR	26003-26027	25	NZ_CP008907	Enterobacter hormaechei subsp. hoffmannii ECR091 plasmid pENT-4bd, complete sequence	99091-99115	4	0.84
CP034655_1	1.2\|26003\|25\|CP034655\|PILER-CR	26003-26027	25	NZ_CP031159	Deinococcus wulumuqiensis strain NEB 479 plasmid pDrdA, complete sequence	184935-184959	4	0.84
CP034655_1	1.2\|26003\|25\|CP034655\|PILER-CR	26003-26027	25	NC_016515	Enterobacter ludwigii strain EcWSU1 plasmid pEcWSU1_A, complete sequence	12348-12372	4	0.84
CP034655_1	1.2\|26003\|25\|CP034655\|PILER-CR	26003-26027	25	NZ_CP049317	Caballeronia sp. SBC2 plasmid pSBC2-1, complete sequence	3848-3872	4	0.84
CP034655_1	1.2\|26003\|25\|CP034655\|PILER-CR	26003-26027	25	NC_009939	Deinococcus geothermalis DSM 11300 plasmid pDGEO02, complete sequence	49767-49791	4	0.84
CP034655_1	1.2\|26003\|25\|CP034655\|PILER-CR	26003-26027	25	NC_008757	Polaromonas naphthalenivorans CJ2 plasmid pPNAP01, complete sequence	156051-156075	4	0.84
CP034655_1	1.2\|26003\|25\|CP034655\|PILER-CR	26003-26027	25	NZ_CP029356	Azospirillum sp. CFH 70021 plasmid unnamed1	349994-350018	4	0.84
CP034655_1	1.2\|26003\|25\|CP034655\|PILER-CR	26003-26027	25	NZ_CP017991	Enterobacter cloacae complex sp. ECNIH7 plasmid pENT-1ac, complete sequence	79708-79732	4	0.84
CP034655_1	1.2\|26003\|25\|CP034655\|PILER-CR	26003-26027	25	NZ_CP017104	Rhizobium gallicum strain IE4872 plasmid pRgalIE4872c, complete sequence	482535-482559	4	0.84
CP034655_1	1.2\|26003\|25\|CP034655\|PILER-CR	26003-26027	25	CP006879	Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602b, complete sequence	483457-483481	4	0.84
CP034655_4	4.44\|4619861\|38\|CP034655\|PILER-CR,CRISPRCasFinder,CRT	4619861-4619898	38	CP020972	Xanthomonas axonopodis pv. phaseoli strain CFBP6546R plasmid pA, complete sequence	31291-31328	4	0.895
CP034655_4	4.44\|4619861\|38\|CP034655\|PILER-CR,CRISPRCasFinder,CRT	4619861-4619898	38	NZ_CP020984	Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6990 plasmid pA, complete sequence	13537-13574	4	0.895
CP034655_4	4.44\|4619861\|38\|CP034655\|PILER-CR,CRISPRCasFinder,CRT	4619861-4619898	38	NZ_CP021008	Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6975 plasmid pA, complete sequence	19735-19772	4	0.895
CP034655_4	4.44\|4619861\|38\|CP034655\|PILER-CR,CRISPRCasFinder,CRT	4619861-4619898	38	NZ_CP020968	Xanthomonas phaseoli pv. phaseoli strain CFBP6164 plasmid pA, complete sequence	36184-36221	4	0.895
CP034655_4	4.44\|4619861\|38\|CP034655\|PILER-CR,CRISPRCasFinder,CRT	4619861-4619898	38	NZ_CP021019	Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6167 plasmid pA, complete sequence	6045-6082	4	0.895
CP034655_4	4.44\|4619861\|38\|CP034655\|PILER-CR,CRISPRCasFinder,CRT	4619861-4619898	38	NZ_CP021019	Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6167 plasmid pA, complete sequence	57187-57224	4	0.895
CP034655_4	4.44\|4619861\|38\|CP034655\|PILER-CR,CRISPRCasFinder,CRT	4619861-4619898	38	NZ_CP020999	Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6165 plasmid pA, complete sequence	11095-11132	4	0.895
CP034655_4	4.44\|4619861\|38\|CP034655\|PILER-CR,CRISPRCasFinder,CRT	4619861-4619898	38	NZ_CP020999	Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6165 plasmid pA, complete sequence	52838-52875	4	0.895
CP034655_4	4.44\|4619861\|38\|CP034655\|PILER-CR,CRISPRCasFinder,CRT	4619861-4619898	38	NZ_CP021002	Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6166 plasmid pA, complete sequence	20128-20165	4	0.895
CP034655_4	4.44\|4619861\|38\|CP034655\|PILER-CR,CRISPRCasFinder,CRT	4619861-4619898	38	CP021013	Xanthomonas citri pv. phaseoli var. fuscans strain CFBP7767 plasmid pA, complete sequence	2745-2782	4	0.895
CP034655_4	4.44\|4619861\|38\|CP034655\|PILER-CR,CRISPRCasFinder,CRT	4619861-4619898	38	CP021013	Xanthomonas citri pv. phaseoli var. fuscans strain CFBP7767 plasmid pA, complete sequence	47031-47068	4	0.895
CP034655_4	4.44\|4619861\|38\|CP034655\|PILER-CR,CRISPRCasFinder,CRT	4619861-4619898	38	NZ_CP020988	Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6994R plasmid pA, complete sequence	22744-22781	4	0.895
CP034655_4	4.44\|4619861\|38\|CP034655\|PILER-CR,CRISPRCasFinder,CRT	4619861-4619898	38	NC_022539	Xanthomonas citri pv. fuscans plasmid pla, complete sequence	18323-18360	4	0.895
CP034655_4	4.44\|4619861\|38\|CP034655\|PILER-CR,CRISPRCasFinder,CRT	4619861-4619898	38	NZ_CP020986	Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6992 plasmid pA, complete sequence	49168-49205	4	0.895
CP034655_4	4.44\|4619861\|38\|CP034655\|PILER-CR,CRISPRCasFinder,CRT	4619861-4619898	38	NZ_CP020993	Xanthomonas citri pv. phaseoli var. fuscans strain CFBP4885 plasmid pA, complete sequence	17693-17730	4	0.895
CP034655_4	4.44\|4619861\|38\|CP034655\|PILER-CR,CRISPRCasFinder,CRT	4619861-4619898	38	NZ_CP021017	Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6991 plasmid pA, complete sequence	11905-11942	4	0.895
CP034655_4	4.44\|4619861\|38\|CP034655\|PILER-CR,CRISPRCasFinder,CRT	4619861-4619898	38	NZ_CP021017	Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6991 plasmid pA, complete sequence	68861-68898	4	0.895
CP034655_4	4.44\|4619861\|38\|CP034655\|PILER-CR,CRISPRCasFinder,CRT	4619861-4619898	38	NZ_CP020982	Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6989 plasmid pA, complete sequence	20733-20770	4	0.895
CP034655_4	4.44\|4619861\|38\|CP034655\|PILER-CR,CRISPRCasFinder,CRT	4619861-4619898	38	NZ_CP012061	Xanthomonas sp. ISO98C4 plasmid pNX59, complete sequence	31099-31136	4	0.895
CP034655_4	4.44\|4619861\|38\|CP034655\|PILER-CR,CRISPRCasFinder,CRT	4619861-4619898	38	NZ_CP020990	Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6996R plasmid pA, complete sequence	37110-37147	4	0.895
CP034655_4	4.44\|4619861\|38\|CP034655\|PILER-CR,CRISPRCasFinder,CRT	4619861-4619898	38	NZ_CP020980	Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6988R plasmid pA, complete sequence	9713-9750	4	0.895
CP034655_4	4.44\|4619861\|38\|CP034655\|PILER-CR,CRISPRCasFinder,CRT	4619861-4619898	38	NZ_CP020980	Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6988R plasmid pA, complete sequence	66782-66819	4	0.895
CP034655_4	4.44\|4619861\|38\|CP034655\|PILER-CR,CRISPRCasFinder,CRT	4619861-4619898	38	NZ_CP012058	Xanthomonas phaseoli pv. phaseoli strain ISO98C12 plasmid pXap59, complete sequence	31100-31137	4	0.895
CP034655_4	4.44\|4619861\|38\|CP034655\|PILER-CR,CRISPRCasFinder,CRT	4619861-4619898	38	NZ_CP012064	Xanthomonas phaseoli pv. phaseoli strain ISO18C8 plasmid pXap59, complete sequence	31101-31138	4	0.895
CP034655_4	4.44\|4619861\|38\|CP034655\|PILER-CR,CRISPRCasFinder,CRT	4619861-4619898	38	NZ_CP012049	Xanthomonas phaseoli pv. phaseoli strain ISO18C2 plasmid pXap59, complete sequence	31101-31138	4	0.895
CP034655_4	4.46\|4619996\|35\|CP034655\|PILER-CR,CRISPRCasFinder,CRT	4619996-4620030	35	NZ_CP020965	Xanthomonas phaseoli pv. phaseoli strain CFBP412 plasmid pA, complete sequence	31038-31072	5	0.857
CP034655_4	4.46\|4619996\|35\|CP034655\|PILER-CR,CRISPRCasFinder,CRT	4619996-4620030	35	NZ_CP020976	Xanthomonas phaseoli pv. phaseoli strain CFBP6982 plasmid pA	15572-15606	5	0.857
CP034655_1	1.2\|26003\|25\|CP034655\|PILER-CR	26003-26027	25	NZ_CP050083	Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b3, complete sequence	308417-308441	6	0.76
CP034655_1	1.2\|26003\|25\|CP034655\|PILER-CR	26003-26027	25	NZ_CP049733	Rhizobium leguminosarum strain A1 plasmid pRL10, complete sequence	299387-299411	6	0.76
CP034655_1	1.2\|26003\|25\|CP034655\|PILER-CR	26003-26027	25	NZ_CP053207	Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1C, complete sequence	330214-330238	6	0.76
CP034655_4	4.19\|4618217\|34\|CP034655\|PILER-CR,CRISPRCasFinder,CRT	4618217-4618250	34	NZ_CP032341	Azospirillum brasilense strain MTCC4038 plasmid p2, complete sequence	428870-428903	7	0.794
CP034655_4	4.19\|4618217\|34\|CP034655\|PILER-CR,CRISPRCasFinder,CRT	4618217-4618250	34	NZ_CP012916	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p2, complete sequence	619736-619769	7	0.794
CP034655_4	4.19\|4618217\|34\|CP034655\|PILER-CR,CRISPRCasFinder,CRT	4618217-4618250	34	NC_019933	Xanthomonas phage CP1 DNA, complete genome	43691-43724	8	0.765
CP034655_4	4.44\|4619861\|38\|CP034655\|PILER-CR,CRISPRCasFinder,CRT	4619861-4619898	38	NZ_CP017325	Xanthomonas campestris pv. campestris str. CN15 plasmid unnamed1, complete sequence	32526-32563	8	0.789
CP034655_4	4.12\|4617752\|33\|CP034655\|PILER-CR,CRISPRCasFinder,CRT	4617752-4617784	33	NC_009543	Xanthomonas phage Xop411, complete genome	31286-31318	9	0.727
CP034655_4	4.12\|4617752\|33\|CP034655\|PILER-CR,CRISPRCasFinder,CRT	4617752-4617784	33	NC_004902	Xanthomonas phage Xp10, complete genome	31899-31931	9	0.727
CP034655_4	4.12\|4617752\|33\|CP034655\|PILER-CR,CRISPRCasFinder,CRT	4617752-4617784	33	AY299121	Xanthomonas oryzae bacteriophage Xp10 genomic DNA, complete genome	31899-31931	9	0.727
CP034655_4	4.12\|4617752\|33\|CP034655\|PILER-CR,CRISPRCasFinder,CRT	4617752-4617784	33	AP008979	Xanthomonas oryzae phage OP1 DNA, complete genome	32180-32212	10	0.697
CP034655_4	4.26\|4618677\|34\|CP034655\|PILER-CR,CRISPRCasFinder,CRT	4618677-4618710	34	MN656993	Enterobacter phage ATCEA85, complete genome	8753-8786	11	0.676
CP034655_4	4.39\|4619533\|35\|CP034655\|PILER-CR,CRISPRCasFinder,CRT	4619533-4619567	35	JX262221	Propionibacterium phage P100_A, complete genome	15418-15452	11	0.686
CP034655_4	4.39\|4619533\|35\|CP034655\|PILER-CR,CRISPRCasFinder,CRT	4619533-4619567	35	KR337652	Propionibacterium phage Stormborn, complete genome	15299-15333	11	0.686
CP034655_4	4.33\|4619136\|34\|CP034655\|PILER-CR,CRISPRCasFinder,CRT	4619136-4619169	34	NZ_CP014662	Salmonella enterica subsp. enterica serovar Anatum str. USDA-ARS-USMARC-1783 plasmid pSAN1-2010K-2577, complete sequence	35940-35973	12	0.647

1. spacer 4.44|4619861|38|CP034655|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017325 (Xanthomonas campestris pv. campestris str. CN15 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.974

gtctcgctggcgacgttctggctgctgctgcccaccgg	CRISPR spacer
gtctcgctggcgacgttctggctgctgctgcccaccga	Protospacer
*************************************.

2. spacer 4.44|4619861|38|CP034655|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034656 (Xanthomonas campestris pv. musacearum NCPPB 4379 plasmid pXCM49, complete sequence) position: , mismatch: 1, identity: 0.974

gtctcgctggcgacgttctggctgctgctgcccaccgg	CRISPR spacer
gtctcgctggcgacgttctggctgctgctgcccaccga	Protospacer
*************************************.

3. spacer 4.44|4619861|38|CP034655|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LN811400 (Xanthomonas campestris pv. campestris isolate B-1459 plasmid I, complete sequence) position: , mismatch: 1, identity: 0.974

gtctcgctggcgacgttctggctgctgctgcccaccgg	CRISPR spacer
gtctcgctggcgacgttctggctgctgctgcccaccga	Protospacer
*************************************.

4. spacer 4.44|4619861|38|CP034655|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017318 (Xanthomonas campestris pv. campestris str. CN14 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.974

gtctcgctggcgacgttctggctgctgctgcccaccgg	CRISPR spacer
gtctcgctggcgacgttctggctgctgctgcccaccga	Protospacer
*************************************.

5. spacer 4.44|4619861|38|CP034655|PILER-CR,CRISPRCasFinder,CRT matches to AP019683 (Xanthomonas campestris pv. campestris MAFF106712 pXcc1 plasmid DNA, complete genome) position: , mismatch: 1, identity: 0.974

gtctcgctggcgacgttctggctgctgctgcccaccgg	CRISPR spacer
gtctcgctggcgacgttctggctgctgctgcccaccga	Protospacer
*************************************.

6. spacer 4.46|4619996|35|CP034655|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LN811400 (Xanthomonas campestris pv. campestris isolate B-1459 plasmid I, complete sequence) position: , mismatch: 1, identity: 0.971

gtttccaaggtcgcagccaacgtcacccgcatcat	CRISPR spacer
gtttccaaggtcgccgccaacgtcacccgcatcat	Protospacer
************** ********************

7. spacer 4.46|4619996|35|CP034655|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018734 (Xanthomonas gardneri strain ICMP 7383 plasmid pICMP7383.3, complete sequence) position: , mismatch: 1, identity: 0.971

gtttccaaggtcgcagccaacgtcacccgcatcat	CRISPR spacer
gtttccaaggtcgccgccaacgtcacccgcatcat	Protospacer
************** ********************

8. spacer 4.47|4620062|37|CP034655|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020884 (Xanthomonas citri pv. citri strain TX160042 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.973

gttgatcaatatggctcggctgcggaaatagtggatg	CRISPR spacer
gttgatcaatatggctcggctgcggaaattgtggatg	Protospacer
***************************** *******

9. spacer 4.47|4620062|37|CP034655|PILER-CR,CRISPRCasFinder,CRT matches to CP030168 (Xanthomonas citri pv. punicae strain LMG7504 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.973

gttgatcaatatggctcggctgcggaaatagtggatg	CRISPR spacer
gttgatcaatatggctcggctgcggaaattgtggatg	Protospacer
***************************** *******

10. spacer 4.47|4620062|37|CP034655|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020891 (Xanthomonas citri pv. citri strain TX160197 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.973

gttgatcaatatggctcggctgcggaaatagtggatg	CRISPR spacer
gttgatcaatatggctcggctgcggaaattgtggatg	Protospacer
***************************** *******

11. spacer 4.9|4617555|35|CP034655|PILER-CR,CRISPRCasFinder,CRT matches to NC_019933 (Xanthomonas phage CP1 DNA, complete genome) position: , mismatch: 2, identity: 0.943

gctcctccacagccttagttgagtcatggcatagc	CRISPR spacer
tctcctccaaagccttagttgagtcatggcatagc	Protospacer
 ******** *************************

12. spacer 4.31|4619004|34|CP034655|PILER-CR,CRISPRCasFinder,CRT matches to MK512531 (Xanthomonas phage Cf2, complete genome) position: , mismatch: 2, identity: 0.941

gagctatgcgtgttcgaaccagtgccagtacaca	CRISPR spacer
gatctatgcgtgttcgaatcagtgccagtacaca	Protospacer
** ***************.***************

13. spacer 4.44|4619861|38|CP034655|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020891 (Xanthomonas citri pv. citri strain TX160197 plasmid unnamed2, complete sequence) position: , mismatch: 2, identity: 0.947

gtctcgctggcgacgttctggctgctgctgcccaccgg	CRISPR spacer
gtctcgctggcgacattctggctgctgctgcccaccga	Protospacer
**************.**********************.

14. spacer 4.44|4619861|38|CP034655|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018469 (Xanthomonas vesicatoria strain LM159 plasmid pLM159.3, complete sequence) position: , mismatch: 2, identity: 0.947

gtctcgctggcgacgttctggctgctgctgcccaccgg	CRISPR spacer
gtctcgctggcgacattctggctgctgctgcccaccga	Protospacer
**************.**********************.

15. spacer 4.44|4619861|38|CP034655|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018466 (Xanthomonas euvesicatoria strain LMG930 plasmid pLMG930.3, complete sequence) position: , mismatch: 2, identity: 0.947

gtctcgctggcgacgttctggctgctgctgcccaccgg	CRISPR spacer
gtctcgctggcgacattctggctgctgctgcccaccga	Protospacer
**************.**********************.

16. spacer 4.44|4619861|38|CP034655|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020884 (Xanthomonas citri pv. citri strain TX160042 plasmid unnamed2, complete sequence) position: , mismatch: 2, identity: 0.947

gtctcgctggcgacgttctggctgctgctgcccaccgg	CRISPR spacer
gtctcgctggcgacattctggctgctgctgcccaccga	Protospacer
**************.**********************.

17. spacer 4.44|4619861|38|CP034655|PILER-CR,CRISPRCasFinder,CRT matches to CP030168 (Xanthomonas citri pv. punicae strain LMG7504 plasmid unnamed2, complete sequence) position: , mismatch: 2, identity: 0.947

gtctcgctggcgacgttctggctgctgctgcccaccgg	CRISPR spacer
gtctcgctggcgacattctggctgctgctgcccaccga	Protospacer
**************.**********************.

18. spacer 4.44|4619861|38|CP034655|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018727 (Xanthomonas vesicatoria ATCC 35937 strain LMG911 plasmid pLMG911.2, complete sequence) position: , mismatch: 2, identity: 0.947

gtctcgctggcgacgttctggctgctgctgcccaccgg	CRISPR spacer
gtctcgctggcgacattctggctgctgctgcccaccga	Protospacer
**************.**********************.

19. spacer 4.46|4619996|35|CP034655|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018474 (Xanthomonas perforans strain LH3 plasmid pLH3.3, complete sequence) position: , mismatch: 2, identity: 0.943

gtttccaaggtcgcagccaacgtcacccgcatcat	CRISPR spacer
gtttccaaggtcgccgccaacgtcactcgcatcat	Protospacer
************** ***********.********

20. spacer 4.46|4619996|35|CP034655|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017325 (Xanthomonas campestris pv. campestris str. CN15 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.943

gtttccaaggtcgcagccaacgtcacccgcatcat	CRISPR spacer
gtttccaaggtcgccaccaacgtcacccgcatcat	Protospacer
************** .*******************

21. spacer 4.46|4619996|35|CP034655|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017325 (Xanthomonas campestris pv. campestris str. CN15 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.943

gtttccaaggtcgcagccaacgtcacccgcatcat	CRISPR spacer
gtttccaaggtcgccaccaacgtcacccgcatcat	Protospacer
************** .*******************

22. spacer 4.46|4619996|35|CP034655|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017318 (Xanthomonas campestris pv. campestris str. CN14 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.943

gtttccaaggtcgcagccaacgtcacccgcatcat	CRISPR spacer
gtttccaaggtcgccaccaacgtcacccgcatcat	Protospacer
************** .*******************

23. spacer 4.46|4619996|35|CP034655|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018730 (Xanthomonas gardneri strain JS749-3 plasmid pJS749-3.2, complete sequence) position: , mismatch: 2, identity: 0.943

gtttccaaggtcgcagccaacgtcacccgcatcat	CRISPR spacer
gtttccaaggtcgccgccaacgtcactcgcatcat	Protospacer
************** ***********.********

24. spacer 4.46|4619996|35|CP034655|PILER-CR,CRISPRCasFinder,CRT matches to AP019683 (Xanthomonas campestris pv. campestris MAFF106712 pXcc1 plasmid DNA, complete genome) position: , mismatch: 2, identity: 0.943

gtttccaaggtcgcagccaacgtcacccgcatcat	CRISPR spacer
gtttccaaggtcgccaccaacgtcacccgcatcat	Protospacer
************** .*******************

25. spacer 1.2|26003|25|CP034655|PILER-CR matches to NZ_CP010990 (Pseudonocardia sp. EC080625-04 plasmid pFRP1-1, complete sequence) position: , mismatch: 3, identity: 0.88

ctcaccgagcgcggcagccaggtca	CRISPR spacer
ctcaccgagcacggcatccaggtcg	Protospacer
**********.***** *******.

26. spacer 1.2|26003|25|CP034655|PILER-CR matches to NZ_CP012186 (Pseudonocardia sp. EC080619-01 plasmid pBCI1-1, complete sequence) position: , mismatch: 3, identity: 0.88

ctcaccgagcgcggcagccaggtca	CRISPR spacer
ctcaccgagcacggcatccaggtcg	Protospacer
**********.***** *******.

27. spacer 1.2|26003|25|CP034655|PILER-CR matches to NC_015314 (Pseudonocardia dioxanivorans CB1190 plasmid pPSED01, complete sequence) position: , mismatch: 3, identity: 0.88

ctcaccgagcgcggcagccaggtca	CRISPR spacer
cacaccgagcgcggccgccacgtca	Protospacer
* ************* **** ****

28. spacer 4.30|4618938|35|CP034655|PILER-CR,CRISPRCasFinder,CRT matches to MK512531 (Xanthomonas phage Cf2, complete genome) position: , mismatch: 3, identity: 0.914

tttgtcggctttttcagcaagggcaagcaggagac	CRISPR spacer
ttcgctggctttttcagcaagggcaagcaggagac	Protospacer
**.*..*****************************

29. spacer 4.44|4619861|38|CP034655|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011166 (Xanthomonas citri pv. aurantifolii strain FDC 1609 plasmid pXfc46, complete sequence) position: , mismatch: 3, identity: 0.921

gtctcgctggcgacgttctggctgctgctgcccaccgg	CRISPR spacer
ctatcgctggcgacgttctggctgctgctgcccaccga	Protospacer
 * **********************************.

30. spacer 4.44|4619861|38|CP034655|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020965 (Xanthomonas phaseoli pv. phaseoli strain CFBP412 plasmid pA, complete sequence) position: , mismatch: 3, identity: 0.921

gtctcgctggcgacgttctggctgctgctgcccaccgg	CRISPR spacer
ctatcgctggcgacgttctggctgctgctgcccaccga	Protospacer
 * **********************************.

31. spacer 4.44|4619861|38|CP034655|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020976 (Xanthomonas phaseoli pv. phaseoli strain CFBP6982 plasmid pA) position: , mismatch: 3, identity: 0.921

gtctcgctggcgacgttctggctgctgctgcccaccgg	CRISPR spacer
ctatcgctggcgacgttctggctgctgctgcccaccga	Protospacer
 * **********************************.

32. spacer 1.2|26003|25|CP034655|PILER-CR matches to NZ_CP049358 (Deinococcus wulumuqiensis R12 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.84

ctcaccgagcgcggcagccaggtca	CRISPR spacer
catgccgagcgcggcagtcaggtca	Protospacer
* ..*************.*******

33. spacer 1.2|26003|25|CP034655|PILER-CR matches to NZ_CP049157 (Caballeronia sp. SBC1 plasmid pSBC1_1, complete sequence) position: , mismatch: 4, identity: 0.84

ctcaccgagcgcggcagccaggtca	CRISPR spacer
tgcatcgcgcgcggcagccaggtca	Protospacer
. **.** *****************

34. spacer 1.2|26003|25|CP034655|PILER-CR matches to NZ_CP009855 (UNVERIFIED_ORG: Enterobacter cloacae strain ECNIH5 plasmid pENT-22e, complete sequence) position: , mismatch: 4, identity: 0.84

ctcaccgagcgcggcagccaggtca	CRISPR spacer
tgcatcgagcgcggccgccaggtca	Protospacer
. **.********** *********

35. spacer 1.2|26003|25|CP034655|PILER-CR matches to NZ_CP008907 (Enterobacter hormaechei subsp. hoffmannii ECR091 plasmid pENT-4bd, complete sequence) position: , mismatch: 4, identity: 0.84

ctcaccgagcgcggcagccaggtca	CRISPR spacer
tgcatcgagcgcggccgccaggtca	Protospacer
. **.********** *********

36. spacer 1.2|26003|25|CP034655|PILER-CR matches to NZ_CP031159 (Deinococcus wulumuqiensis strain NEB 479 plasmid pDrdA, complete sequence) position: , mismatch: 4, identity: 0.84

ctcaccgagcgcggcagccaggtca	CRISPR spacer
catgccgagcgcggcagtcaggtca	Protospacer
* ..*************.*******

37. spacer 1.2|26003|25|CP034655|PILER-CR matches to NC_016515 (Enterobacter ludwigii strain EcWSU1 plasmid pEcWSU1_A, complete sequence) position: , mismatch: 4, identity: 0.84

ctcaccgagcgcggcagccaggtca	CRISPR spacer
tgcatcgagcgcggccgccaggtca	Protospacer
. **.********** *********

38. spacer 1.2|26003|25|CP034655|PILER-CR matches to NZ_CP049317 (Caballeronia sp. SBC2 plasmid pSBC2-1, complete sequence) position: , mismatch: 4, identity: 0.84

ctcaccgagcgcggcagccaggtca	CRISPR spacer
tgcatcgcgcgcggcagccaggtca	Protospacer
. **.** *****************

39. spacer 1.2|26003|25|CP034655|PILER-CR matches to NC_009939 (Deinococcus geothermalis DSM 11300 plasmid pDGEO02, complete sequence) position: , mismatch: 4, identity: 0.84

ctcaccgagcgcggcagccaggtca	CRISPR spacer
ctgaccgagcgcggcacccaggtgt	Protospacer
** ************* ******

40. spacer 1.2|26003|25|CP034655|PILER-CR matches to NC_008757 (Polaromonas naphthalenivorans CJ2 plasmid pPNAP01, complete sequence) position: , mismatch: 4, identity: 0.84

ctcaccgagcgcggcagccaggtca	CRISPR spacer
gtcaccgagcacgccagccaggtcg	Protospacer
 *********.** **********.

41. spacer 1.2|26003|25|CP034655|PILER-CR matches to NZ_CP029356 (Azospirillum sp. CFH 70021 plasmid unnamed1) position: , mismatch: 4, identity: 0.84

ctcaccgagcgcggcagccaggtca	CRISPR spacer
gacgccgagcgcggcagccaggtga	Protospacer
  *.******************* *

42. spacer 1.2|26003|25|CP034655|PILER-CR matches to NZ_CP017991 (Enterobacter cloacae complex sp. ECNIH7 plasmid pENT-1ac, complete sequence) position: , mismatch: 4, identity: 0.84

ctcaccgagcgcggcagccaggtca	CRISPR spacer
agcatcgagcgcggcagtcaggtca	Protospacer
  **.************.*******

43. spacer 1.2|26003|25|CP034655|PILER-CR matches to NZ_CP017104 (Rhizobium gallicum strain IE4872 plasmid pRgalIE4872c, complete sequence) position: , mismatch: 4, identity: 0.84

ctcaccgagcgcggcagccaggtca	CRISPR spacer
gacaccgatcgcggcagccaggaca	Protospacer
  ****** ************* **

44. spacer 1.2|26003|25|CP034655|PILER-CR matches to CP006879 (Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602b, complete sequence) position: , mismatch: 4, identity: 0.84

ctcaccgagcgcggcagccaggtca	CRISPR spacer
gacaccgatcgcggcagccaggaca	Protospacer
  ****** ************* **

45. spacer 4.44|4619861|38|CP034655|PILER-CR,CRISPRCasFinder,CRT matches to CP020972 (Xanthomonas axonopodis pv. phaseoli strain CFBP6546R plasmid pA, complete sequence) position: , mismatch: 4, identity: 0.895

gtctcgctggcgacgttctggctgctgctgcccaccgg	CRISPR spacer
ctatcgctggcgacgttctggctcctgctgcccaccga	Protospacer
 * ******************** *************.

46. spacer 4.44|4619861|38|CP034655|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020984 (Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6990 plasmid pA, complete sequence) position: , mismatch: 4, identity: 0.895

gtctcgctggcgacgttctggctgctgctgcccaccgg	CRISPR spacer
ctatcgctggcgacgttctggctcctgctgcccaccga	Protospacer
 * ******************** *************.

47. spacer 4.44|4619861|38|CP034655|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021008 (Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6975 plasmid pA, complete sequence) position: , mismatch: 4, identity: 0.895

gtctcgctggcgacgttctggctgctgctgcccaccgg	CRISPR spacer
ctatcgctggcgacgttctggctcctgctgcccaccga	Protospacer
 * ******************** *************.

48. spacer 4.44|4619861|38|CP034655|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020968 (Xanthomonas phaseoli pv. phaseoli strain CFBP6164 plasmid pA, complete sequence) position: , mismatch: 4, identity: 0.895

gtctcgctggcgacgttctggctgctgctgcccaccgg	CRISPR spacer
ctatcgctggcgacgttctggctcctgctgcccaccga	Protospacer
 * ******************** *************.

49. spacer 4.44|4619861|38|CP034655|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021019 (Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6167 plasmid pA, complete sequence) position: , mismatch: 4, identity: 0.895

gtctcgctggcgacgttctggctgctgctgcccaccgg	CRISPR spacer
ctatcgctggcgacgttctggctcctgctgcccaccga	Protospacer
 * ******************** *************.

50. spacer 4.44|4619861|38|CP034655|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021019 (Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6167 plasmid pA, complete sequence) position: , mismatch: 4, identity: 0.895

gtctcgctggcgacgttctggctgctgctgcccaccgg	CRISPR spacer
ctatcgctggcgacgttctggctcctgctgcccaccga	Protospacer
 * ******************** *************.

51. spacer 4.44|4619861|38|CP034655|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020999 (Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6165 plasmid pA, complete sequence) position: , mismatch: 4, identity: 0.895

gtctcgctggcgacgttctggctgctgctgcccaccgg	CRISPR spacer
ctatcgctggcgacgttctggctcctgctgcccaccga	Protospacer
 * ******************** *************.

52. spacer 4.44|4619861|38|CP034655|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020999 (Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6165 plasmid pA, complete sequence) position: , mismatch: 4, identity: 0.895

gtctcgctggcgacgttctggctgctgctgcccaccgg	CRISPR spacer
ctatcgctggcgacgttctggctcctgctgcccaccga	Protospacer
 * ******************** *************.

53. spacer 4.44|4619861|38|CP034655|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021002 (Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6166 plasmid pA, complete sequence) position: , mismatch: 4, identity: 0.895

gtctcgctggcgacgttctggctgctgctgcccaccgg	CRISPR spacer
ctatcgctggcgacgttctggctcctgctgcccaccga	Protospacer
 * ******************** *************.

54. spacer 4.44|4619861|38|CP034655|PILER-CR,CRISPRCasFinder,CRT matches to CP021013 (Xanthomonas citri pv. phaseoli var. fuscans strain CFBP7767 plasmid pA, complete sequence) position: , mismatch: 4, identity: 0.895

gtctcgctggcgacgttctggctgctgctgcccaccgg	CRISPR spacer
ctatcgctggcgacgttctggctcctgctgcccaccga	Protospacer
 * ******************** *************.

55. spacer 4.44|4619861|38|CP034655|PILER-CR,CRISPRCasFinder,CRT matches to CP021013 (Xanthomonas citri pv. phaseoli var. fuscans strain CFBP7767 plasmid pA, complete sequence) position: , mismatch: 4, identity: 0.895

gtctcgctggcgacgttctggctgctgctgcccaccgg	CRISPR spacer
ctatcgctggcgacgttctggctcctgctgcccaccga	Protospacer
 * ******************** *************.

56. spacer 4.44|4619861|38|CP034655|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020988 (Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6994R plasmid pA, complete sequence) position: , mismatch: 4, identity: 0.895

gtctcgctggcgacgttctggctgctgctgcccaccgg	CRISPR spacer
ctatcgctggcgacgttctggctcctgctgcccaccga	Protospacer
 * ******************** *************.

57. spacer 4.44|4619861|38|CP034655|PILER-CR,CRISPRCasFinder,CRT matches to NC_022539 (Xanthomonas citri pv. fuscans plasmid pla, complete sequence) position: , mismatch: 4, identity: 0.895

gtctcgctggcgacgttctggctgctgctgcccaccgg	CRISPR spacer
ctatcgctggcgacgttctggctcctgctgcccaccga	Protospacer
 * ******************** *************.

58. spacer 4.44|4619861|38|CP034655|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020986 (Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6992 plasmid pA, complete sequence) position: , mismatch: 4, identity: 0.895

gtctcgctggcgacgttctggctgctgctgcccaccgg	CRISPR spacer
ctatcgctggcgacgttctggctcctgctgcccaccga	Protospacer
 * ******************** *************.

59. spacer 4.44|4619861|38|CP034655|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020993 (Xanthomonas citri pv. phaseoli var. fuscans strain CFBP4885 plasmid pA, complete sequence) position: , mismatch: 4, identity: 0.895

gtctcgctggcgacgttctggctgctgctgcccaccgg	CRISPR spacer
ctatcgctggcgacgttctggctcctgctgcccaccga	Protospacer
 * ******************** *************.

60. spacer 4.44|4619861|38|CP034655|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021017 (Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6991 plasmid pA, complete sequence) position: , mismatch: 4, identity: 0.895

gtctcgctggcgacgttctggctgctgctgcccaccgg	CRISPR spacer
ctatcgctggcgacgttctggctcctgctgcccaccga	Protospacer
 * ******************** *************.

61. spacer 4.44|4619861|38|CP034655|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021017 (Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6991 plasmid pA, complete sequence) position: , mismatch: 4, identity: 0.895

gtctcgctggcgacgttctggctgctgctgcccaccgg	CRISPR spacer
ctatcgctggcgacgttctggctcctgctgcccaccga	Protospacer
 * ******************** *************.

62. spacer 4.44|4619861|38|CP034655|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020982 (Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6989 plasmid pA, complete sequence) position: , mismatch: 4, identity: 0.895

gtctcgctggcgacgttctggctgctgctgcccaccgg	CRISPR spacer
ctatcgctggcgacgttctggctcctgctgcccaccga	Protospacer
 * ******************** *************.

63. spacer 4.44|4619861|38|CP034655|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012061 (Xanthomonas sp. ISO98C4 plasmid pNX59, complete sequence) position: , mismatch: 4, identity: 0.895

gtctcgctggcgacgttctggctgctgctgcccaccgg	CRISPR spacer
ctatcgctggcgacgttctggctcctgctgcccaccga	Protospacer
 * ******************** *************.

64. spacer 4.44|4619861|38|CP034655|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020990 (Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6996R plasmid pA, complete sequence) position: , mismatch: 4, identity: 0.895

gtctcgctggcgacgttctggctgctgctgcccaccgg	CRISPR spacer
ctatcgctggcgacgttctggctcctgctgcccaccga	Protospacer
 * ******************** *************.

65. spacer 4.44|4619861|38|CP034655|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020980 (Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6988R plasmid pA, complete sequence) position: , mismatch: 4, identity: 0.895

gtctcgctggcgacgttctggctgctgctgcccaccgg	CRISPR spacer
ctatcgctggcgacgttctggctcctgctgcccaccga	Protospacer
 * ******************** *************.

66. spacer 4.44|4619861|38|CP034655|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020980 (Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6988R plasmid pA, complete sequence) position: , mismatch: 4, identity: 0.895

gtctcgctggcgacgttctggctgctgctgcccaccgg	CRISPR spacer
ctatcgctggcgacgttctggctcctgctgcccaccga	Protospacer
 * ******************** *************.

67. spacer 4.44|4619861|38|CP034655|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012058 (Xanthomonas phaseoli pv. phaseoli strain ISO98C12 plasmid pXap59, complete sequence) position: , mismatch: 4, identity: 0.895

gtctcgctggcgacgttctggctgctgctgcccaccgg	CRISPR spacer
ctatcgctggcgacgttctggctcctgctgcccaccga	Protospacer
 * ******************** *************.

68. spacer 4.44|4619861|38|CP034655|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012064 (Xanthomonas phaseoli pv. phaseoli strain ISO18C8 plasmid pXap59, complete sequence) position: , mismatch: 4, identity: 0.895

gtctcgctggcgacgttctggctgctgctgcccaccgg	CRISPR spacer
ctatcgctggcgacgttctggctcctgctgcccaccga	Protospacer
 * ******************** *************.

69. spacer 4.44|4619861|38|CP034655|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012049 (Xanthomonas phaseoli pv. phaseoli strain ISO18C2 plasmid pXap59, complete sequence) position: , mismatch: 4, identity: 0.895

gtctcgctggcgacgttctggctgctgctgcccaccgg	CRISPR spacer
ctatcgctggcgacgttctggctcctgctgcccaccga	Protospacer
 * ******************** *************.

70. spacer 4.46|4619996|35|CP034655|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020965 (Xanthomonas phaseoli pv. phaseoli strain CFBP412 plasmid pA, complete sequence) position: , mismatch: 5, identity: 0.857

gtttccaaggtcgcagccaacgtcacccgcatcat	CRISPR spacer
gtcagcaaggtcgcggcgaacgtcacccgcatcat	Protospacer
**.  *********.** *****************

71. spacer 4.46|4619996|35|CP034655|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020976 (Xanthomonas phaseoli pv. phaseoli strain CFBP6982 plasmid pA) position: , mismatch: 5, identity: 0.857

gtttccaaggtcgcagccaacgtcacccgcatcat	CRISPR spacer
gtcagcaaggtcgcggcgaacgtcacccgcatcat	Protospacer
**.  *********.** *****************

72. spacer 1.2|26003|25|CP034655|PILER-CR matches to NZ_CP050083 (Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b3, complete sequence) position: , mismatch: 6, identity: 0.76

ctcaccgagcgcggcagccaggtca	CRISPR spacer
aggaccgagcgcggcagccagggat	Protospacer
   *******************

73. spacer 1.2|26003|25|CP034655|PILER-CR matches to NZ_CP049733 (Rhizobium leguminosarum strain A1 plasmid pRL10, complete sequence) position: , mismatch: 6, identity: 0.76

ctcaccgagcgcggcagccaggtca	CRISPR spacer
aggaccgagcgcggcagccagggat	Protospacer
   *******************

74. spacer 1.2|26003|25|CP034655|PILER-CR matches to NZ_CP053207 (Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1C, complete sequence) position: , mismatch: 6, identity: 0.76

ctcaccgagcgcggcagccaggtca	CRISPR spacer
aggaccgagcgcggcagccagggat	Protospacer
   *******************

75. spacer 4.19|4618217|34|CP034655|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032341 (Azospirillum brasilense strain MTCC4038 plasmid p2, complete sequence) position: , mismatch: 7, identity: 0.794

tgggcattggacaaccatcagcccctatgcaagc	CRISPR spacer
tcggcattggccaaccatcagcacctttcccggc	Protospacer
* ******** *********** *** * * .**

76. spacer 4.19|4618217|34|CP034655|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012916 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p2, complete sequence) position: , mismatch: 7, identity: 0.794

tgggcattggacaaccatcagcccctatgcaagc	CRISPR spacer
tcggcattggccaaccatcagcacctttcccggc	Protospacer
* ******** *********** *** * * .**

77. spacer 4.19|4618217|34|CP034655|PILER-CR,CRISPRCasFinder,CRT matches to NC_019933 (Xanthomonas phage CP1 DNA, complete genome) position: , mismatch: 8, identity: 0.765

tgggcattggacaaccatcagcccctatgcaagc	CRISPR spacer
tggcagctcaacaatcatcagcccctgtgcaagc	Protospacer
***  ..* .****.***********.*******

78. spacer 4.44|4619861|38|CP034655|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017325 (Xanthomonas campestris pv. campestris str. CN15 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.789

gtctcgctggcgacgttctggctgctgctgcccaccgg	CRISPR spacer
gcggcgacctcgacgttctggctgctgctgcccaccga	Protospacer
*.  ** .  ***************************.

79. spacer 4.12|4617752|33|CP034655|PILER-CR,CRISPRCasFinder,CRT matches to NC_009543 (Xanthomonas phage Xop411, complete genome) position: , mismatch: 9, identity: 0.727

ctggtgtgtctgtctaccttggtaagagttggc	CRISPR spacer
cgggtgtgtctctcaaccttggtaagtcctact	Protospacer
* ********* ** ***********  .*. .

80. spacer 4.12|4617752|33|CP034655|PILER-CR,CRISPRCasFinder,CRT matches to NC_004902 (Xanthomonas phage Xp10, complete genome) position: , mismatch: 9, identity: 0.727

ctggtgtgtctgtctaccttggtaagagttggc	CRISPR spacer
cgggtgtgtctctcaaccttggtaagtcctact	Protospacer
* ********* ** ***********  .*. .

81. spacer 4.12|4617752|33|CP034655|PILER-CR,CRISPRCasFinder,CRT matches to AY299121 (Xanthomonas oryzae bacteriophage Xp10 genomic DNA, complete genome) position: , mismatch: 9, identity: 0.727

ctggtgtgtctgtctaccttggtaagagttggc	CRISPR spacer
cgggtgtgtctctcaaccttggtaagtcctact	Protospacer
* ********* ** ***********  .*. .

82. spacer 4.12|4617752|33|CP034655|PILER-CR,CRISPRCasFinder,CRT matches to AP008979 (Xanthomonas oryzae phage OP1 DNA, complete genome) position: , mismatch: 10, identity: 0.697

ctggtgtgtctgtctaccttggtaagagttggc	CRISPR spacer
tgggtgtgtctctcaaccttggtaagtcctact	Protospacer
. ********* ** ***********  .*. .

83. spacer 4.26|4618677|34|CP034655|PILER-CR,CRISPRCasFinder,CRT matches to MN656993 (Enterobacter phage ATCEA85, complete genome) position: , mismatch: 11, identity: 0.676

ttagcaccaccagcaaagcgggctagctgatact	CRISPR spacer
agcacaccaccaacaaagcgggcgagctttaccc	Protospacer
   .********.********** ****    *.

84. spacer 4.39|4619533|35|CP034655|PILER-CR,CRISPRCasFinder,CRT matches to JX262221 (Propionibacterium phage P100_A, complete genome) position: , mismatch: 11, identity: 0.686

actcttttgtaccagcagcgcatcattctgcgcca	CRISPR spacer
tgaggtttattccagcagcgcatcattctgccggc	Protospacer
     ***.* ********************

85. spacer 4.39|4619533|35|CP034655|PILER-CR,CRISPRCasFinder,CRT matches to KR337652 (Propionibacterium phage Stormborn, complete genome) position: , mismatch: 11, identity: 0.686

actcttttgtaccagcagcgcatcattctgcgcca	CRISPR spacer
tgaggtttattccagcagcgcatcattctgccggc	Protospacer
     ***.* ********************

86. spacer 4.33|4619136|34|CP034655|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014662 (Salmonella enterica subsp. enterica serovar Anatum str. USDA-ARS-USMARC-1783 plasmid pSAN1-2010K-2577, complete sequence) position: , mismatch: 12, identity: 0.647

tgggagactgtcagacaataagctggtgctgacg	CRISPR spacer
ctggagcctgtcagacaatgagctggaaaccgtc	Protospacer
. **** ************.****** . . ..

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

634431 : 646503

Leptospira_phage(50.0%)

transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZR29660.1\|634431_635646_-\|transposase	IS4 family transposase	A0A0F7LAS3	uncultured_marine_virus	3.1e-54	32.9
AZR29661.1\|635689_635902_+	hypothetical protein	NA	NA	NA	NA
AZR29662.1\|636145_636835_+\|transposase	transposase	NA	NA	NA	NA
AZR29663.1\|636901_637597_-	hypothetical protein	NA	NA	NA	NA
AZR32810.1\|637593_638616_-	hypothetical protein	NA	NA	NA	NA
AZR29664.1\|639288_640433_-\|transposase	IS3 family transposase	U5P429	Shigella_phage	2.5e-85	56.9
AZR29665.1\|640431_640632_+	hypothetical protein	NA	NA	NA	NA
AZR29666.1\|640742_642830_-	type III effector	NA	NA	NA	NA
AZR29667.1\|643070_643253_-	hypothetical protein	NA	NA	NA	NA
AZR29668.1\|643298_643526_+	hypothetical protein	NA	NA	NA	NA
AZR29669.1\|643833_644211_-\|transposase	transposase	NA	NA	NA	NA
AZR29670.1\|644268_645377_-\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	1.0e-43	39.8
AZR29671.1\|645401_646503_+\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	7.0e-45	41.6

DBSCAN-SWA_2

1163722 : 1222460

Bacillus_phage(30.77%)

holin,protease,integrase,transposase

attL 1217666:1217683|attR 1223131:1223148

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZR30074.1\|1163722_1165804_+\|holin	phospholipase C, phosphocholine-specific	NA	NA	NA	NA
AZR30075.1\|1168205_1168850_+	histidine phosphatase family protein	NA	NA	NA	NA
AZR30076.1\|1169589_1170888_+	bifunctional tetrahydrofolate synthase/dihydrofolate synthase	NA	NA	NA	NA
AZR30077.1\|1170955_1172020_+	SPOR domain-containing protein	NA	NA	NA	NA
AZR30078.1\|1172235_1173015_+	CvpA family protein	NA	NA	NA	NA
AZR30079.1\|1173045_1174512_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	1.4e-85	40.1
AZR30080.1\|1174650_1175475_+	ferritin-like domain-containing protein	NA	NA	NA	NA
AZR30081.1\|1176031_1177285_+	peptidase	NA	NA	NA	NA
AZR30082.1\|1177420_1177840_+	hypothetical protein	NA	NA	NA	NA
AZR30083.1\|1178016_1178760_-	UDP-2,3-diacylglucosamine diphosphatase	NA	NA	NA	NA
AZR30084.1\|1179397_1179940_-	phosphatase PAP2 family protein	NA	NA	NA	NA
AZR30085.1\|1179920_1181057_-	glycosyltransferase family 1 protein	NA	NA	NA	NA
AZR30086.1\|1181280_1182807_-	exopolyphosphatase	NA	NA	NA	NA
AZR30087.1\|1182977_1185080_-	polyphosphate kinase 1	NA	NA	NA	NA
AZR30088.1\|1185196_1186540_-	phosphate regulon sensor histidine kinase PhoR	W8CYF6	Bacillus_phage	8.5e-29	33.3
AZR30089.1\|1186597_1187287_-	phosphate regulon transcriptional regulatory protein PhoB	W8CYM9	Bacillus_phage	1.0e-33	35.7
AZR30090.1\|1187471_1189118_-	M48 family peptidase	NA	NA	NA	NA
AZR30091.1\|1189267_1189576_+	glutaredoxin 3	A0A2L0UZG6	Agrobacterium_phage	3.6e-07	43.2
AZR30092.1\|1189572_1189968_+	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA
AZR30093.1\|1190339_1191347_+	isocitrate dehydrogenase	NA	NA	NA	NA
AZR30094.1\|1191479_1192241_-	Bax inhibitor-1/YccA family protein	NA	NA	NA	NA
AZR30095.1\|1193114_1193324_+	hypothetical protein	NA	NA	NA	NA
AZR30096.1\|1193320_1194589_-	PAS domain-containing sensor histidine kinase	NA	NA	NA	NA
AZR30097.1\|1195134_1196427_+	trigger factor	NA	NA	NA	NA
AZR30098.1\|1196519_1197146_+\|protease	ATP-dependent Clp protease proteolytic subunit	A0A223W000	Agrobacterium_phage	1.0e-56	57.4
AZR30099.1\|1197271_1198558_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	5.3e-137	59.9
AZR30100.1\|1198701_1201173_+	endopeptidase La	A0A0R6PGP8	Moraxella_phage	7.9e-214	50.2
AZR30101.1\|1201386_1201659_+	HU family DNA-binding protein	A7KV42	Bacillus_phage	2.2e-21	64.0
AZR30102.1\|1202271_1204242_+	peptidylprolyl isomerase	NA	NA	NA	NA
AZR30103.1\|1204374_1204644_+	hypothetical protein	NA	NA	NA	NA
AZR30104.1\|1204965_1206141_-	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA
AZR32836.1\|1206137_1206905_-	hydroxyacylglutathione hydrolase	NA	NA	NA	NA
AZR30105.1\|1206917_1207574_+	hypothetical protein	NA	NA	NA	NA
AZR30106.1\|1207602_1208055_+	ribonuclease HI	A0A1Q2U2R0	Vibrio_phage	4.7e-40	54.7
AZR30107.1\|1208063_1208798_+	DNA polymerase III subunit epsilon	A0A1X9SH08	Bradyrhizobium_phage	8.7e-36	40.4
AZR30108.1\|1209238_1209943_-	serine/threonine-protein phosphatase	NA	NA	NA	NA
AZR30109.1\|1210487_1210892_+	hypothetical protein	A0A1C9C5K8	Heterosigma_akashiwo_virus	6.5e-17	36.6
AZR32837.1\|1211040_1211804_-\|transposase	IS5 family transposase	NA	NA	NA	NA
AZR30110.1\|1212069_1213119_-	lipopolysaccharide heptosyltransferase family protein	NA	NA	NA	NA
AZR30111.1\|1213139_1213889_+	3-deoxy-D-manno-octulosonic acid kinase	NA	NA	NA	NA
AZR30112.1\|1213888_1214638_+	MBL fold metallo-hydrolase	A0A0A0RUN7	Bacillus_phage	1.7e-10	26.5
AZR30113.1\|1214637_1215669_+	GTP 3',8-cyclase MoaA	NA	NA	NA	NA
AZR30114.1\|1216039_1216537_+	cyclic pyranopterin monophosphate synthase MoaC	NA	NA	NA	NA
AZR30115.1\|1216533_1216779_+	molybdopterin converting factor subunit 1	NA	NA	NA	NA
AZR30116.1\|1216775_1217225_+	molybdenum cofactor biosynthesis protein MoaE	NA	NA	NA	NA
1217666:1217683	attL	NA	NA	NA	NA
AZR30117.1\|1218024_1218471_+	hypothetical protein	NA	NA	NA	NA
AZR30118.1\|1218550_1218955_+	histone-like nucleoid-structuring protein	NA	NA	NA	NA
AZR32838.1\|1218981_1220169_-\|integrase	site-specific integrase	NA	NA	NA	NA
AZR30119.1\|1220560_1220791_-	hypothetical protein	NA	NA	NA	NA
AZR30120.1\|1220964_1221294_-	hypothetical protein	NA	NA	NA	NA
AZR30121.1\|1221351_1222460_-\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	3.8e-43	37.9
1223131:1223148	attR	NA	NA	NA	NA

DBSCAN-SWA_3

1916770 : 1927542

Micromonas_pusilla_virus(16.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZR30654.1\|1916770_1918447_+	2-polyprenylphenol 6-hydroxylase	G8DDN0	Micromonas_pusilla_virus	4.9e-42	29.7
AZR30655.1\|1918537_1919179_+	transcriptional repressor LexA	A0A1W6JNS2	Morganella_phage	2.4e-13	40.2
AZR30656.1\|1919351_1920386_+	recombinase RecA	A0A0S2MVG1	Bacillus_phage	1.1e-111	60.7
AZR30657.1\|1920687_1921176_+	recombination regulator RecX	NA	NA	NA	NA
AZR30658.1\|1921277_1923926_+\|tRNA	alanine--tRNA ligase	A0A1V0SK38	Klosneuvirus	8.2e-84	39.8
AZR30659.1\|1924066_1924279_+	carbon storage regulator	J7I430	Pseudomonas_phage	8.7e-13	74.5
AZR32889.1\|1924850_1925090_+	hypothetical protein	NA	NA	NA	NA
AZR30660.1\|1925544_1927542_+	PAS domain S-box protein	A0A2H4J162	uncultured_Caudovirales_phage	1.9e-08	31.9

DBSCAN-SWA_4

2292517 : 2337506

Ralstonia_phage(50.0%)

plate,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZR30926.1\|2292517_2293501_-\|transposase	IS5 family transposase	A0A077K814	Ralstonia_phage	1.1e-97	60.5
AZR30927.1\|2293528_2303503_+	hypothetical protein	NA	NA	NA	NA
AZR30928.1\|2303808_2304420_-	response regulator transcription factor	NA	NA	NA	NA
AZR32916.1\|2304416_2305439_-	HAMP domain-containing histidine kinase	NA	NA	NA	NA
AZR30929.1\|2305557_2307042_-	efflux transporter outer membrane subunit	NA	NA	NA	NA
AZR30930.1\|2307038_2310131_-	efflux RND transporter permease subunit	NA	NA	NA	NA
AZR30931.1\|2310123_2311239_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
AZR30932.1\|2311724_2314466_-	autotransporter domain-containing protein	NA	NA	NA	NA
AZR30933.1\|2315602_2315836_+	hypothetical protein	NA	NA	NA	NA
AZR30934.1\|2316292_2316394_+	two-component system sensor protein	NA	NA	NA	NA
AZR30935.1\|2316481_2316790_-	hypothetical protein	NA	NA	NA	NA
AZR30936.1\|2316897_2317104_+	hypothetical protein	NA	NA	NA	NA
AZR30937.1\|2317111_2317528_+	hypothetical protein	NA	NA	NA	NA
AZR30938.1\|2317524_2318856_+	sorbosone dehydrogenase family protein	NA	NA	NA	NA
AZR30939.1\|2319080_2319905_-\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	1.7e-32	32.0
AZR30940.1\|2320220_2320748_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
AZR30941.1\|2320740_2322255_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
AZR30942.1\|2322354_2322858_+	type VI secretion system tube protein Hcp	NA	NA	NA	NA
AZR30943.1\|2322893_2323727_+	ImpE protein	NA	NA	NA	NA
AZR30944.1\|2323714_2324218_+\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
AZR30945.1\|2324221_2326099_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
AZR30946.1\|2326062_2327073_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
AZR30947.1\|2327104_2329810_+	type VI secretion system ATPase TssH	H6X3M6	Enterobacteria_phage	5.1e-81	29.4
AZR32917.1\|2330023_2330707_+	hypothetical protein	NA	NA	NA	NA
AZR30948.1\|2331326_2331533_+	hypothetical protein	NA	NA	NA	NA
AZR30949.1\|2331632_2332094_+	hypothetical protein	NA	NA	NA	NA
AZR30950.1\|2332304_2334242_+	type VI secretion system tip protein VgrG	A0A077K8Q4	Ralstonia_phage	2.4e-40	29.3
AZR30951.1\|2334250_2334790_+	hypothetical protein	NA	NA	NA	NA
AZR30952.1\|2334786_2336172_+	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA
AZR30953.1\|2336168_2337506_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA

DBSCAN-SWA_5

2355513 : 2366816

Xanthomonas_phage(75.0%)

coat

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZR30965.1\|2355513_2355906_+	DUF4124 domain-containing protein	A0A077JCA3	Xanthomonas_phage	3.0e-59	89.2
AZR30966.1\|2356175_2356451_+	hypothetical protein	A0A1W6DXU7	Xanthomonas_phage	4.9e-16	52.1
AZR30967.1\|2356527_2356809_-	XRE family transcriptional regulator	A0A2D1GR59	Pseudomonas_phage	9.4e-15	48.4
AZR30968.1\|2356805_2357144_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
AZR30969.1\|2357553_2357937_-	hypothetical protein	A0A077JDD0	Xanthomonas_phage	1.0e-56	85.0
AZR30970.1\|2358119_2358446_+	hypothetical protein	S0F2N2	Stenotrophomonas_phage	7.1e-14	43.0
AZR30971.1\|2358515_2358827_+	chloride channel protein	A0A1W6DXV7	Xanthomonas_phage	5.9e-50	92.2
AZR30972.1\|2359214_2359490_-	hypothetical protein	A0A1W6DXU7	Xanthomonas_phage	2.9e-16	51.0
AZR30973.1\|2359833_2360136_+	hypothetical protein	NA	NA	NA	NA
AZR30974.1\|2360132_2360786_-	conjugal transfer protein	A0A077JBM8	Xanthomonas_phage	5.8e-100	83.6
AZR30975.1\|2360785_2361952_-	zonular occludens toxin	A0A077JGB2	Xanthomonas_phage	1.9e-202	89.7
AZR30976.1\|2361948_2362266_-	DUF2523 domain-containing protein	A0A077JCZ2	Xanthomonas_phage	9.9e-53	98.1
AZR30977.1\|2362265_2363816_-\|coat	A coat protein	A0A077JDC5	Xanthomonas_phage	3.6e-132	70.3
AZR30978.1\|2363920_2364178_-	hypothetical protein	A0A077JBM7	Xanthomonas_phage	1.3e-34	95.3
AZR30979.1\|2364183_2364384_-	hypothetical protein	A0A077JGA5	Xanthomonas_phage	3.0e-31	98.5
AZR30980.1\|2364415_2364706_-	single-stranded DNA-binding protein	B1NI78	Stenotrophomonas_phage	1.4e-26	69.4
AZR30981.1\|2364702_2365809_-	replication protein	S0F3I3	Stenotrophomonas_phage	3.5e-161	74.2
AZR32919.1\|2365808_2366369_-	hypothetical protein	NA	NA	NA	NA
AZR30982.1\|2366412_2366595_-	hypothetical protein	NA	NA	NA	NA
AZR30983.1\|2366591_2366816_-	hypothetical protein	A0A1W6DXK4	Xanthomonas_phage	3.0e-24	88.4

DBSCAN-SWA_6

3424000 : 3471340

Ralstonia_phage(33.33%)

tRNA,protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZR31798.1\|3424000_3424984_-\|transposase	IS5 family transposase	A0A077K814	Ralstonia_phage	1.1e-97	60.5
AZR31799.1\|3425351_3425720_-	hypothetical protein	NA	NA	NA	NA
AZR31800.1\|3425926_3426289_-	hypothetical protein	NA	NA	NA	NA
AZR31801.1\|3426956_3428065_-\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	1.0e-43	39.8
AZR31802.1\|3428638_3429883_-	MFS transporter	NA	NA	NA	NA
AZR31803.1\|3430369_3430663_+	zinc ribbon domain-containing protein	NA	NA	NA	NA
AZR31804.1\|3430820_3431060_+	hypothetical protein	NA	NA	NA	NA
AZR31805.1\|3431265_3432033_-	DUF3011 domain-containing protein	NA	NA	NA	NA
AZR31806.1\|3432190_3433957_+\|tRNA	aspartate--tRNA ligase	NA	NA	NA	NA
AZR31807.1\|3434267_3434795_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
AZR31808.1\|3434907_3435585_+	alpha/beta hydrolase	NA	NA	NA	NA
AZR31809.1\|3435674_3436403_+	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA
AZR31810.1\|3436516_3437041_+	crossover junction endodeoxyribonuclease RuvC	NA	NA	NA	NA
AZR31811.1\|3437198_3437783_+	Holliday junction branch migration protein RuvA	NA	NA	NA	NA
AZR31812.1\|3437980_3439888_+	potassium transporter Kup	M1IAJ4	Acanthocystis_turfacea_Chlorella_virus	5.7e-79	34.4
AZR31813.1\|3439951_3440935_+\|transposase	IS5 family transposase	A0A077K814	Ralstonia_phage	1.1e-97	60.5
AZR31814.1\|3441033_3441267_+	hypothetical protein	NA	NA	NA	NA
AZR31815.1\|3442401_3443214_+	hypothetical protein	NA	NA	NA	NA
AZR31816.1\|3443465_3444449_+\|transposase	IS5 family transposase	A0A077K814	Ralstonia_phage	1.1e-97	60.5
AZR31817.1\|3445717_3446587_-	NAD(P)H-hydrate dehydratase	NA	NA	NA	NA
AZR32992.1\|3446586_3447366_-	histidine phosphatase family protein	NA	NA	NA	NA
AZR31818.1\|3447580_3448210_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AZR31819.1\|3449721_3450504_-	hypothetical protein	NA	NA	NA	NA
AZR32993.1\|3452692_3452986_-	hypothetical protein	NA	NA	NA	NA
AZR31820.1\|3453564_3457038_+	type I restriction-modification system endonuclease	A0A1B1IW48	uncultured_Mediterranean_phage	1.5e-05	25.5
AZR31821.1\|3457126_3458329_+	Fic family protein	A0A1V0E025	Clostridioides_phage	4.1e-06	26.7
AZR31822.1\|3458325_3459870_+	SAM-dependent methyltransferase	A0A220A2U5	Liberibacter_phage	1.2e-13	24.2
AZR31823.1\|3459850_3461338_+	type I restriction endonuclease subunit S	NA	NA	NA	NA
AZR31824.1\|3461971_3462835_+	hypothetical protein	NA	NA	NA	NA
AZR32994.1\|3462884_3463064_+	hypothetical protein	NA	NA	NA	NA
AZR31825.1\|3463277_3464186_+	hypothetical protein	NA	NA	NA	NA
AZR31826.1\|3464444_3467114_-	M1 family peptidase	A0A0P0IY26	Acinetobacter_phage	1.5e-77	28.1
AZR31827.1\|3469349_3470213_-\|protease	protease modulator HflC	NA	NA	NA	NA
AZR31828.1\|3470212_3471340_-\|protease	FtsH protease activity modulator HflK	NA	NA	NA	NA

DBSCAN-SWA_7

4335666 : 4342035

Enterobacteria_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZR32420.1\|4335666_4337013_+	phosphomannomutase/phosphoglucomutase	A0A127AWJ1	Bacillus_phage	2.6e-33	26.7
AZR32421.1\|4337058_4338462_+	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	A0A1V0SH58	Hokovirus	5.5e-47	29.7
AZR32422.1\|4338579_4339488_-	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	1.8e-27	35.1
AZR32423.1\|4339484_4340042_-	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	1.0e-44	48.1
AZR32424.1\|4340038_4340926_-	glucose-1-phosphate thymidylyltransferase	I7I009	Enterobacteria_phage	3.5e-95	58.5
AZR32425.1\|4340979_4342035_-	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	8.6e-85	48.3

DBSCAN-SWA_8

4537227 : 4550433

Stenotrophomonas_phage(54.55%)

plate,holin,tail,transposase,integrase

attL 4538157:4538171|attR 4547798:4547812

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZR32586.1\|4537227_4537437_+\|tail	phage tail protein	K4PAW7	Burkholderia_phage	1.2e-14	59.4
AZR32587.1\|4537441_4537798_+	hypothetical protein	V9IQG9	Stenotrophomonas_phage	3.8e-21	55.3
AZR32588.1\|4537790_4538066_+\|holin	phage holin family protein	V9IQV8	Stenotrophomonas_phage	3.6e-19	57.5
AZR32589.1\|4538062_4538704_+	glycoside hydrolase family 19 protein	V9IQK6	Stenotrophomonas_phage	4.2e-50	62.7
4538157:4538171	attL	NA	NA	NA	NA
AZR32590.1\|4540041_4541143_+\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	7.0e-45	41.6
AZR33079.1\|4541429_4542254_+	hypothetical protein	NA	NA	NA	NA
AZR32591.1\|4542265_4542733_+	hypothetical protein	NA	NA	NA	NA
AZR32592.1\|4543629_4544738_-\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	1.1e-42	39.0
AZR32593.1\|4544784_4545228_+\|plate	baseplate assembly protein	V9IQV9	Stenotrophomonas_phage	2.3e-31	48.3
AZR32594.1\|4545220_4545556_+\|tail	phage tail protein I	V9IQK7	Stenotrophomonas_phage	3.3e-22	55.4
AZR32595.1\|4545534_4546679_-\|transposase	IS3 family transposase	U5P429	Shigella_phage	1.2e-87	58.4
AZR33080.1\|4546900_4547395_+\|integrase	integrase	V9IQN0	Stenotrophomonas_phage	9.7e-39	52.1
AZR33081.1\|4548045_4548366_-	hypothetical protein	NA	NA	NA	NA
4547798:4547812	attR	NA	NA	NA	NA
AZR32596.1\|4548558_4550433_-	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	1.8e-37	35.5

DBSCAN-SWA_9

4713683 : 4777717

Bacillus_phage(23.08%)

tail,protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZR32717.1\|4713683_4714667_-\|transposase	IS5 family transposase	A0A077K814	Ralstonia_phage	1.1e-97	60.5
AZR32718.1\|4714730_4715621_-	pseudouridylate synthase	NA	NA	NA	NA
AZR32719.1\|4715959_4717540_+	hypothetical protein	NA	NA	NA	NA
AZR32720.1\|4717890_4718742_+	hypothetical protein	NA	NA	NA	NA
AZR32721.1\|4719202_4720039_+	restriction endonuclease	NA	NA	NA	NA
AZR32722.1\|4720162_4721827_+	DUF2813 domain-containing protein	NA	NA	NA	NA
AZR32723.1\|4722171_4723274_-\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	7.0e-45	41.6
AZR33091.1\|4723626_4724061_+	hypothetical protein	NA	NA	NA	NA
AZR32724.1\|4724232_4724724_-	nuclear transport factor 2 family protein	NA	NA	NA	NA
AZR33092.1\|4724879_4725149_-	hypothetical protein	NA	NA	NA	NA
AZR32725.1\|4725444_4725783_+	hypothetical protein	NA	NA	NA	NA
AZR32726.1\|4726229_4726328_+	hypothetical protein	NA	NA	NA	NA
AZR32727.1\|4726429_4727824_-	type III secretion system effector protein	NA	NA	NA	NA
AZR32728.1\|4728208_4728499_-	addiction module antidote protein, HigA family	M9MUN2	Rhodococcus_phage	3.3e-15	52.5
AZR32729.1\|4728516_4728798_-	type II toxin-antitoxin system RelE/ParE family toxin	A0A222YWE2	Escherichia_phage	2.0e-09	34.4
AZR32730.1\|4728899_4731140_-	exodeoxyribonuclease V subunit alpha	A0A0K2FLP8	Brevibacillus_phage	3.5e-11	23.5
AZR32731.1\|4731342_4735389_-	exodeoxyribonuclease V subunit beta	S5MMD7	Bacillus_phage	1.8e-10	22.3
AZR32732.1\|4735385_4738799_-	exodeoxyribonuclease V subunit gamma	NA	NA	NA	NA
AZR32733.1\|4739148_4743927_-	autotransporter domain-containing protein	F5B3Z3	Synechococcus_phage	1.7e-18	44.9
AZR32734.1\|4744185_4744737_+\|tail	phage tail protein	NA	NA	NA	NA
AZR32735.1\|4744804_4745332_+\|tail	phage tail protein	A0A222ZFV4	Arthrobacter_phage	2.4e-11	31.4
AZR32736.1\|4745392_4745929_+\|tail	phage tail protein	NA	NA	NA	NA
AZR32737.1\|4745942_4746500_+	N-acetyltransferase	NA	NA	NA	NA
AZR33093.1\|4746532_4746820_-	hypothetical protein	NA	NA	NA	NA
AZR32738.1\|4747206_4748001_+	ATP-binding cassette domain-containing protein	W8CYL7	Bacillus_phage	2.6e-09	29.1
AZR32739.1\|4748000_4748750_+	ABC transporter permease	NA	NA	NA	NA
AZR32740.1\|4748761_4749313_+	outer membrane lipid asymmetry maintenance protein MlaD	NA	NA	NA	NA
AZR32741.1\|4749309_4749972_+	organic solvent ABC transporter	NA	NA	NA	NA
AZR32742.1\|4749961_4750252_+	STAS domain-containing protein	NA	NA	NA	NA
AZR32743.1\|4750262_4751318_+	VacJ family lipoprotein	NA	NA	NA	NA
AZR32744.1\|4751392_4752196_-	FRG domain-containing protein	NA	NA	NA	NA
AZR32745.1\|4752205_4752769_-	glutathione peroxidase	Q70H87	Fowlpox_virus	5.3e-17	35.8
AZR32746.1\|4753144_4753513_-	hypothetical protein	NA	NA	NA	NA
AZR32747.1\|4753732_4755313_-	DNA recombination protein RmuC	NA	NA	NA	NA
AZR32748.1\|4755448_4756456_-	zinc-binding alcohol dehydrogenase family protein	NA	NA	NA	NA
AZR33094.1\|4756552_4757476_+	LysR family transcriptional regulator	NA	NA	NA	NA
AZR33095.1\|4757953_4758184_+	hypothetical protein	NA	NA	NA	NA
AZR32749.1\|4758137_4758347_-	hypothetical protein	NA	NA	NA	NA
AZR32750.1\|4759107_4759488_+	hypothetical protein	NA	NA	NA	NA
AZR32751.1\|4759707_4761123_+	amino acid permease	NA	NA	NA	NA
AZR32752.1\|4761319_4761556_-	hypothetical protein	NA	NA	NA	NA
AZR32753.1\|4761651_4764141_-	glycoside hydrolase family 92 protein	NA	NA	NA	NA
AZR32754.1\|4764543_4765134_-	hypothetical protein	NA	NA	NA	NA
AZR32755.1\|4765356_4765746_-	DUF2628 domain-containing protein	NA	NA	NA	NA
AZR32756.1\|4765865_4767614_-	diguanylate cyclase	A0A127AWB9	Bacillus_phage	1.1e-15	32.3
AZR32757.1\|4767734_4768925_-	carbohydrate diacid regulon transcriptional regulator CdaR	NA	NA	NA	NA
AZR32758.1\|4769167_4770337_-	glycerate kinase	W6LM47	Streptococcus_phage	9.6e-45	39.7
AZR32759.1\|4770362_4771673_-	MFS transporter	NA	NA	NA	NA
AZR32760.1\|4772184_4773426_-	membrane dipeptidase	NA	NA	NA	NA
AZR32761.1\|4773709_4774030_-	hypothetical protein	NA	NA	NA	NA
AZR32762.1\|4774148_4775315_-	class I SAM-dependent rRNA methyltransferase	NA	NA	NA	NA
AZR32763.1\|4775637_4776594_+	TerC family protein	K4F9T9	Cronobacter_phage	4.2e-30	29.9
AZR32764.1\|4776931_4777717_+\|protease	rhomboid family intramembrane serine protease	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP034655

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection