CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP024871	Leptospira mayottensis 200901116 chromosome I, complete sequence	6 crisprs	cas3,csa3,DinG,RT,Cas9_archaeal,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,WYL	8	33	7	3
CP024873	Leptospira mayottensis 200901116 plasmid p1_L200901116, complete sequence	0 crisprs	NA	0	0	2	5
CP024872	Leptospira mayottensis 200901116 chromosome II, complete sequence	0 crisprs	csa3	0	0	1	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP024871_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP024871_1

574209-574908

Orphan

I-E,II-B

Consensus_repeat	Method
CGGTTCAACCCCACGTGTGTGGGGAAAAG	CRISPRCasFinder
CGGTTCAACCCCACGTGTGTGGGGAAAAG	CRT
CGGTTCAACCCCACGTGTGTGGGGAAAAG	PILER-CR

11 spacers

The CRISPR arrays of CP024871_1

>merge|CP024871|1|574209-574908|CRISPRCasFinder,CRT,PILER-CR
TAATGCAACCCCACGTGTGTGGGGAAAAGTGGATTTACTTTAACGAAAAACCGGTTGCCGACGGTTCAACCCCACGTGTGTGGGGAAAAGGGGTTCGGGTTAACTGACGGGGAAAAGATCATCGGTTCAACCCCACGTGTGTGGGGAAAAGCCAACTCCATAACAAAGCACTGGCCACATTGTCGGTTCAACCCCACGTGTGTGGGGAAAAGTTATTAGTTCAGGAACTGCGTTTATAAACAAACGGTTCAACCCCACGTGTGTGGGGAAAAGTAATCCTAATGACAATTCTTTAATAGCTGTCACGGTTCAACCCCACGTGTGTGGGGAAAAGTCCTCTACCTGCTCAGGAGTGTAGCCCTCGCCCGGTTCAACCCCACGTGTGTGGGGAAAAGGGGATACTCAAAACCTCTCGACGGGTTCATGTCGGTTCAACCCCACGTGTGTGGGGAAAAGGGGATACTCAAAACCTCTCGACGGGTTCATGTCGGTTCAACCCCACGTGTGTGGGGAAAAGTTTTGCAGCCTGTCTCTCTTTTGCCTCTTCTGCGGTTCAACCCCACGTGTGTGGGGAAAAGTGATTAAGCTTAACAGTTATCTTATCCCAATACGGTTCAACCCCACGTGTGTGGGGAAAAGAAATACGTCGTAGGAAAAAAACTCCTGAAAGTCGGTTCAACCCCACGTGTGTGGGGAAAAG

>CP024871|1|1|574209-574908|CRISPRCasFinder
TAATGCAACCCCACGTGTGTGGGGAAAAG	TGGATTTACTTTAACGAAAAACCGGTTGCCGA
CGGTTCAACCCCACGTGTGTGGGGAAAAG	GGGTTCGGGTTAACTGACGGGGAAAAGATCAT
CGGTTCAACCCCACGTGTGTGGGGAAAAG	CCAACTCCATAACAAAGCACTGGCCACATTGT
CGGTTCAACCCCACGTGTGTGGGGAAAAG	TTATTAGTTCAGGAACTGCGTTTATAAACAAA
CGGTTCAACCCCACGTGTGTGGGGAAAAG	TAATCCTAATGACAATTCTTTAATAGCTGTCA
CGGTTCAACCCCACGTGTGTGGGGAAAAG	TCCTCTACCTGCTCAGGAGTGTAGCCCTCGCC
CGGTTCAACCCCACGTGTGTGGGGAAAAG	GGGATACTCAAAACCTCTCGACGGGTTCATGT
CGGTTCAACCCCACGTGTGTGGGGAAAAG	GGGATACTCAAAACCTCTCGACGGGTTCATGT
CGGTTCAACCCCACGTGTGTGGGGAAAAG	TTTTGCAGCCTGTCTCTCTTTTGCCTCTTCTG
CGGTTCAACCCCACGTGTGTGGGGAAAAG	TGATTAAGCTTAACAGTTATCTTATCCCAATA
CGGTTCAACCCCACGTGTGTGGGGAAAAG	AAATACGTCGTAGGAAAAAAACTCCTGAAAGT
CGGTTCAACCCCACGTGTGTGGGGAAAAG

>CP024871|1|1|574209-574908|CRT
TAATGCAACCCCACGTGTGTGGGGAAAAG	TGGATTTACTTTAACGAAAAACCGGTTGCCGA
CGGTTCAACCCCACGTGTGTGGGGAAAAG	GGGTTCGGGTTAACTGACGGGGAAAAGATCAT
CGGTTCAACCCCACGTGTGTGGGGAAAAG	CCAACTCCATAACAAAGCACTGGCCACATTGT
CGGTTCAACCCCACGTGTGTGGGGAAAAG	TTATTAGTTCAGGAACTGCGTTTATAAACAAA
CGGTTCAACCCCACGTGTGTGGGGAAAAG	TAATCCTAATGACAATTCTTTAATAGCTGTCA
CGGTTCAACCCCACGTGTGTGGGGAAAAG	TCCTCTACCTGCTCAGGAGTGTAGCCCTCGCC
CGGTTCAACCCCACGTGTGTGGGGAAAAG	GGGATACTCAAAACCTCTCGACGGGTTCATGT
CGGTTCAACCCCACGTGTGTGGGGAAAAG	GGGATACTCAAAACCTCTCGACGGGTTCATGT
CGGTTCAACCCCACGTGTGTGGGGAAAAG	TTTTGCAGCCTGTCTCTCTTTTGCCTCTTCTG
CGGTTCAACCCCACGTGTGTGGGGAAAAG	TGATTAAGCTTAACAGTTATCTTATCCCAATA
CGGTTCAACCCCACGTGTGTGGGGAAAAG	AAATACGTCGTAGGAAAAAAACTCCTGAAAGT
CGGTTCAACCCCACGTGTGTGGGGAAAAG

>CP024871|1|1|574270-574908|PILER-CR
CGGTTCAACCCCACGTGTGTGGGGAAAAG	GGGTTCGGGTTAACTGACGGGGAAAAGATCAT
CGGTTCAACCCCACGTGTGTGGGGAAAAG	CCAACTCCATAACAAAGCACTGGCCACATTGT
CGGTTCAACCCCACGTGTGTGGGGAAAAG	TTATTAGTTCAGGAACTGCGTTTATAAACAAA
CGGTTCAACCCCACGTGTGTGGGGAAAAG	TAATCCTAATGACAATTCTTTAATAGCTGTCA
CGGTTCAACCCCACGTGTGTGGGGAAAAG	TCCTCTACCTGCTCAGGAGTGTAGCCCTCGCC
CGGTTCAACCCCACGTGTGTGGGGAAAAG	GGGATACTCAAAACCTCTCGACGGGTTCATGT
CGGTTCAACCCCACGTGTGTGGGGAAAAG	GGGATACTCAAAACCTCTCGACGGGTTCATGT
CGGTTCAACCCCACGTGTGTGGGGAAAAG	TTTTGCAGCCTGTCTCTCTTTTGCCTCTTCTG
CGGTTCAACCCCACGTGTGTGGGGAAAAG	TGATTAAGCTTAACAGTTATCTTATCCCAATA
CGGTTCAACCCCACGTGTGTGGGGAAAAG	AAATACGTCGTAGGAAAAAAACTCCTGAAAGT
CGGTTCAACCCCACGTGTGTGGGGAAAAG

Protein	Signature genes	Signature genes Name	Protein_function
CP024871.1\|AZQ01134.1\|585043_586570_+\|HDOD-domain-containing-protein	unknown	unknown	gnl\|CDD\|370050
CP024871.1\|AZQ01126.1\|571502_572696_-\|M23-family-peptidase	unknown	unknown	gnl\|CDD\|366703
CP024871.1\|AZQ01133.1\|584484_584688_+\|hypothetical-protein	unknown	unknown	unknown
CP024871.1\|AZQ01130.1\|578037_580515_+\|endopeptidase-La	unknown	unknown	gnl\|CDD\|223542
CP024871.1\|AZQ01135.1\|586994_587999_-\|hypothetical-protein	unknown	unknown	unknown
CP024871.1\|AZQ01132.1\|582921_584403_-\|aldehyde-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|143452
CP024871.1\|AZQ01125.1\|570763_571186_-\|MAPEG-family-protein	unknown	unknown	gnl\|CDD\|376462
CP024871.1\|AZQ01123.1\|569318_570035_-\|PhoU-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|273990
CP024871.1\|AZQ01119.1\|563377_564472_+\|IS110-family-transposase	unknown	unknown	gnl\|CDD\|376773
CP024871.1\|AZQ01124.1\|570444_570678_-\|hypothetical-protein	unknown	unknown	unknown
CP024871.1\|AZQ01136.1\|588731_589421_-\|hydrolase	unknown	unknown	gnl\|CDD\|274056
CP024871.1\|AZQ03639.1\|577885_578089_-\|hypothetical-protein	unknown	unknown	unknown
CP024871.1\|AZQ01121.1\|566016_566496_-\|hypothetical-protein	unknown	unknown	unknown
CP024871.1\|AZQ01120.1\|564669_564858_+\|hypothetical-protein	unknown	unknown	unknown
CP024871.1\|AZQ01122.1\|566943_569169_-\|WGR-domain-containing-protein	unknown	unknown	gnl\|CDD\|226352
CP024871.1\|AZQ01129.1\|576218_577652_-\|DUF1566-domain-containing-protein	unknown	unknown	gnl\|CDD\|377878
CP024871.1\|AZQ01131.1\|580588_581713_+\|DegT/DnrJ/EryC1/StrS-family-aminotransferase	unknown	unknown	gnl\|CDD\|99740
CP024871.1\|AZQ01128.1\|573393_574131_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372671
CP024871.1\|AZQ01127.1\|573019_573322_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|366690
CP024871.1\|AZQ03640.1\|582056_582539_+\|DNA-starvation/stationary-phase-protection-protein	unknown	unknown	gnl\|CDD\|223854

Protein	Function_ID	Function_description	E-value
CP024871.1\|AZQ01134.1\|585043_586570_+\|HDOD-domain-containing-protein	gnl\|CDD\|370050	pfam08668, HDOD, HDOD domain.	1.20301e-60
CP024871.1\|AZQ01132.1\|582921_584403_-\|aldehyde-dehydrogenase-family-protein	gnl\|CDD\|143452	cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehyde dehydrogenase AlkH-like. Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD.	0
CP024871.1\|AZQ01125.1\|570763_571186_-\|MAPEG-family-protein	gnl\|CDD\|376462	pfam01124, MAPEG, MAPEG family. This family is has been called MAPEG (Membrane Associated Proteins in Eicosanoid and Glutathione metabolism). It includes proteins such as Prostaglandin E synthase. This enzyme catalyzes the synthesis of PGE2 from PGH2 (produced by cyclooxygenase from arachidonic acid). Because of structural similarities in the active sites of FLAP, LTC4 synthase and PGE synthase, substrates for each enzyme can compete with one another and modulate synthetic activity.	1.38475e-11
CP024871.1\|AZQ01123.1\|569318_570035_-\|PhoU-family-transcriptional-regulator	gnl\|CDD\|273990	TIGR02135, Uncharacterized_protein, phosphate transport system regulatory protein PhoU. This model describes PhoU, a regulatory protein of unknown mechanism for high-affinity phosphate ABC transporter systems. The protein consists of two copies of the domain described by pfam01895. Deletion of PhoU activates constitutive expression of the phosphate ABC transporter and allows phosphate transport, but causes a growth defect and so likely has some second function. [Regulatory functions, Other, Transport and binding proteins, Anions].	7.78724e-25
CP024871.1\|AZQ01119.1\|563377_564472_+\|IS110-family-transposase	gnl\|CDD\|376773	pfam02371, Transposase_20, Transposase IS116/IS110/IS902 family. Transposases are needed for efficient transposition of the insertion sequence or transposon DNA. This family includes transposases for IS116, IS110 and IS902. This region is often found with pfam01548. The exact function of this region is uncertain. This family contains a HHH motif suggesting a DNA-binding function.	7.1291e-21
CP024871.1\|AZQ01130.1\|578037_580515_+\|endopeptidase-La	gnl\|CDD\|223542	COG0466, Lon, ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones].	0
CP024871.1\|AZQ01136.1\|588731_589421_-\|hydrolase	gnl\|CDD\|274056	TIGR02252, Rhythmically_expressed_gene_2_protein, REG-2-like, HAD superfamily (subfamily IA) hydrolase. This family of proteins includes uncharacterized sequences from eukaryotes, cyanobacteria and Leptospira as well as the DREG-2 protein from Drosophila melanogaster which has been identified as a rhythmically (diurnally) regulated gene. This family is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The superfamily is defined by the presence of three short catalytic motifs. The subfamilies are defined based on the location and the observed or predicted fold of a so-called 'capping domain', or the absence of such a domain. This family is a member of subfamily 1A in which the cap domain consists of a predicted alpha helical bundle found in between the first and second catalytic motifs. A distinctive feature of this family is a conserved tandem pair of tryptophan residues in the cap domain. The most divergent sequences included within the scope of this model are from plants and have "FW" at this position instead. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.	3.08957e-72
CP024871.1\|AZQ03640.1\|582056_582539_+\|DNA-starvation/stationary-phase-protection-protein	gnl\|CDD\|223854	COG0783, Dps, DNA-binding ferritin-like protein (oxidative damage protectant) [Inorganic ion transport and metabolism].	6.26523e-62
CP024871.1\|AZQ01126.1\|571502_572696_-\|M23-family-peptidase	gnl\|CDD\|366703	pfam01551, Peptidase_M23, Peptidase family M23. Members of this family are zinc metallopeptidases with a range of specificities. The peptidase family M23 is included in this family, these are Gly-Gly endopeptidases. Peptidase family M23 are also endopeptidases. This family also includes some bacterial lipoproteins for which no proteolytic activity has been demonstrated. This family also includes leukocyte cell-derived chemotaxin 2 (LECT2) proteins. LECT2 is a liver-specific protein which is thought to be linked to hepatocyte growth although the exact function of this protein is unknown.	1.75477e-24
CP024871.1\|AZQ01122.1\|566943_569169_-\|WGR-domain-containing-protein	gnl\|CDD\|226352	COG3831, COG3831, Uncharacterized conserved protein [Function unknown].	4.98352e-07
CP024871.1\|AZQ01129.1\|576218_577652_-\|DUF1566-domain-containing-protein	gnl\|CDD\|377878	pfam07603, DUF1566, Protein of unknown function (DUF1566). These proteins of unknown function are found in Leptospira interrogans and in several gamma proteobacteria.	1.78737e-28
CP024871.1\|AZQ01131.1\|580588_581713_+\|DegT/DnrJ/EryC1/StrS-family-aminotransferase	gnl\|CDD\|99740	cd00616, AHBA_syn, 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein encoded by gene pglA, is a galactosyltransferase involved in pilin glycosylation. Additionally, this CD consists of ArnB (PmrH) aminotransferase, a 4-amino-4-deoxy-L-arabinose lipopolysaccharide-modifying enzyme. This CD also consists of several predicted pyridoxal phosphate-dependent enzymes apparently involved in regulation of cell wall biogenesis. The catalytic lysine which is present in all characterized PLP dependent enzymes is replaced by histidine in some members of this CD.	6.48987e-112
CP024871.1\|AZQ01128.1\|573393_574131_+\|hypothetical-protein	gnl\|CDD\|372671	pfam13683, rve_3, Integrase core domain.	2.13481e-31
CP024871.1\|AZQ01127.1\|573019_573322_+\|hypothetical-protein	gnl\|CDD\|366690	pfam01527, HTH_Tnp_1, Transposase. Transposase proteins are necessary for efficient DNA transposition. This family consists of various E. coli insertion elements and other bacterial transposases some of which are members of the IS3 family.	3.83544e-15

>CP024871.1|AZQ01128.1|573393_574131_+|hypothetical-protein
MQISRTGFRHRSRLQDKNMELKDRILTLAYKHKRAGYRQIHDFIRQEERVNHKRIYRLYSALGLKYRIKPKRKRVSLPAIPKIVPKKPEERWSMDFMSDSLYSGRKFRILNIIDDFGRFAVATQVEFSITSERLVRILNEVSEVRSLPKQIVVDNGPEFTSKAFLRWAFEKGVDIHFITPGKPTENAFIESFNGKMRNECLNENWFKNIEEAQRLVEDWRNFYNSERPHSSLGGLTPEEYLRRSA
>CP024871.1|AZQ01127.1|573019_573322_+|hypothetical-protein
MKSSQEHKILEENMKKRFSEDQIHKILKESESGISTPELCRKYGISGNTFYRWRSKYGGLELNDLKRMKTLEEENSRLKKLYAELALENEAIKMLLEKKW
>CP024871.1|AZQ01126.1|571502_572696_-|M23-family-peptidase
MRNFIVVLIFTVFTFSGLLAKTSDFNGECKPKEWICILTRNENNKVEFYVQNQTPSGEYPFIIYFNFSTLNNFEADVPLPYRFVSKGSSEPKKFLTISPIDSRKERSYNSNIYVKAGDDGSKARNLPYRLPFESSSRVGQGYNGKFTHTGIFTYALDFTLSEGSPILAAREGLVIAIQDKYQSGGTISFYKDKANFIQILHKDGSIAEYAHLKHKGISVQIGQIVQTGERIGFSGNTGFSSAPHLHFHVLRHKADLQTLESVPISFETDEGVLDELKEGVVYWNPSNTLPAGKIFFEEDLKICSEFIQKKLSECEEKFNPQKRPILALEVRKPGKYDLKVEVCNPDSICKRIDWTLQPEWKSSVSYFDWNLFPGQPGKYKIQVINDIEIIKTWIVER
>CP024871.1|AZQ01125.1|570763_571186_-|MAPEG-family-protein
MHPAIIALLGFVSWTLVLGLWLVSIRSFKVLMGTNKSDEFPAGIKHGSEFYWRLNRAHLNCIENLPVFGVLVLIGGFIGVLDETFGLVSQIVLGARIFQTLAHLSSGSVFAINTRFTGFIVQYGSFIYFLWHILHNTGIV
>CP024871.1|AZQ01124.1|570444_570678_-|hypothetical-protein
MRTTQACLKFEKLQSCIERYVVSKFEEHCDKTDQTSFYRRKFFQIWNFLSTSEIEFTSRITKTFLQNVSLKNYTKRQ
>CP024871.1|AZQ01123.1|569318_570035_-|PhoU-family-transcriptional-regulator
MFSKFDFLRKNLYSMAELCLEQVLLLDDALEKDDSELAKKLIDRDDLIDNLEKQNDNLSQNAILEAVANRNSMGMDQVDGEVVLKRDPLRFALSAIRITRNLERMGDQIVNCAKCFRRGLIPKRFFCEEEILNKLLSRVITIVGMAVESLVEEKNRFYGSVHTVEEEINNLCQSAFLKFVMDPRLDKNQFADVYRLILCLERTGDYAVNMAEELVRLNTGMDIRHVSDPVQAIAETIS
>CP024871.1|AZQ01122.1|566943_569169_-|WGR-domain-containing-protein
MKKHFIYSENGSEIFWQIEISGLSLVLSSGKTGNAIAKRSIRNFKTREQCFKEFQKLIDQKSELGFRESDRIPTFKTLNGNTDYLTTWNAILEASDRKQALRSHFEILTETEECAAVLDQIVSKIEEIYIENDQFVFTLPWHYDEETKVHIRWNAPYIGRIHSSVPHSMAKFVTNFNGVSFHHDNDDLAITWVLGVEPKDKEKSALVVGDGGWEKEILEKGDDWWIAPLEILEQDFGDVQCFGAFDESQNWFVYHPVVKNRFGELAITTVSHESCEMEEAVVRYGMGGFILREIASWILDIEIDSGKDLALSGSPVVTRAFQEFVAHKAVTLSENHPEVAKRLLKCDWHALADSIHKTISKWVRSLAKEVAVEKDILVIDSYWDDAGEVIFLGLDWHSGTDYEDAISEGANEIDYPLDFTSFYKLVLGKDQNAELDGDEVVETLEDDYSIIRDILTYLSIENLISVANGEDFQKLPLDEKGVYIAYSHYHDEEAEVVYHSIEGIKKEFFKSLFSTEGKNKKEREVPEEEQELIDDIVGDVMENYPWIWKDTIEKSMNRLAENFQENKERYQREFNKILEYKEKVDEEEKTTLSNLGMQMSSAALNRFLRENKPDAAKWVLQCYSDIYRSLEINGNSTFTGNETGNSYNTAEYFAGDIIVFITKYNESQYLALLEDLLPADIQDARLVFNLACLNSLEKNKENVLRYTKLALSLGKPKKDFEDSDFDNFKDDPEFHSLVVLH
>CP024871.1|AZQ01121.1|566016_566496_-|hypothetical-protein
MCFSWLTLKSISNFSFIKNIKKTKYSNETITLIFENSKIRAVLKGEQIEAQFKCLDGFLLITSYNYYDGTDYWYYFLNNDLEVKDMIFDPYVSFLYMEKTHIINSQTLQFSFLKPNQTWRLVIHFEPFWDFSLSAVLKRPFRFVFKKRILSLFKLESPS
>CP024871.1|AZQ01120.1|564669_564858_+|hypothetical-protein
MLFSNELNYWVIKKKCEKIFTAPDGGAISEPVSKLVVQRKCKNINVKWTNIIQKSPMHFGKK
>CP024871.1|AZQ01119.1|563377_564472_+|IS110-family-transposase
MKRKVYVGMDVHKETIRIACLTSNTKEIVKEQQIKHNEVQIKKFVNKLKSEWNEIHSCYEAGVTGYPLYRYLKSLGVNCILVAPGKIPRQSSDKIKTDKRDAIKLAKLLRSGELESIHVPSEEDEAVRDYLRSRDSLRLDLGRNRQRLMKFLLRKGITYSKTKYWTVSHNKWLNNLQFNNEILQETFNDYYSRVRVQEENLKAMDKRIQEIAESEPYREKVGILRCFRGVDYLTAMFLLCEVCDFKRFKTAGSFMSFLGLVPGEYSSGSKRKQTGITKTGSPRLRRILTEAAWQHRFPGTGSKIVTARRSGQPALVVALAEKASLRLHKKFRNLQQRGKTPQVMITAVSRELSGFLWAAMNLVA
>CP024871.1|AZQ01129.1|576218_577652_-|DUF1566-domain-containing-protein
MNQTFGLLWMFAAILLFASCSQAERINIDTSSTTGLLFQGGIALGPGPNNQSQDQGDLESSEPKEINSFRFQASNHFFTTDFVGEISGTLITVQVPFGAIYRLKATFISTGVNVEVNGVPQTSGQTVNNFSSPVIYRVTATDKSVKDYTVQVIPIFRLTDAGQINCFFTFCNDDPGQDADYSTGVPKTFQSNIVLSDYTTQPVTIDRQTGLTWKYCAAGLNNAACSAYNNYSYTQSDAVTYCNNLNQINAGLGYAGIRNWRLPEIEELMTLSTHKTPSTTYIDLTEFPFGDGEFWSNTTNMSNTAEAWGFDFTYGSNNSANKSSRNMLVRCVSGGTIPVRSFSDFNNGIVKDNLTGLVWQKCSVGQTWSPISSLCNIGSITSHNFISALSICKNLNLDGRTWRLPNVHELRSLLDFPSTTSAKINRTFFPNTPAASQYVTSNSIPGSQIFRVSFTDGVINTANLSTPNYVRCVSDDL
>CP024871.1|AZQ03639.1|577885_578089_-|hypothetical-protein
MEQLNSLQYPINPLKAPKDLLKSENIPGEPDFVQVLIPEEILKSNPIHFVLKKPQKPEELSLRINLQ
>CP024871.1|AZQ01130.1|578037_580515_+|endopeptidase-La
MEPLEDLSGIEENSIVPLDLILPPELFLVPIKSRPVFPGIITPLIVPNGKFAKAVEQSLRGNSFLGLVLLKDEENEKETSENIYQFGVVAKILKKVHLPDDAVNILINTIRRFKIDSYTSKDPLIAKVSYPEEEPGAPKNTIKAMMRTLLVMTRELAQNNPLFTEEMKLTMLNVNEPGKMADFVCSILNLEKEEYQSVIESNILKERIEKVLLFLKKEIELVSIQREISDQIQDKIDKQQRQFFLREQLKAIQNELGIKDDKFEKKYEKFLERLKSIGADTEVIEEVSRELDKFSYADPNTGDYNVIRNYLDILESLPWEPAPAREIDLDKAKKTLDRDHYKLEDVKDRILEFLAVKKLKSDEKGTILLLVGPPGVGKTSIARSIAEAMGRKFFRFSVGGMRDEAEIKGHRRTYIGSMPGKIISALRITKEKDCVILLDEIDKLAAGIQGDPASAFLEVLDPEQNKNFRDHYLDLPFDISNVFFIATANTLDSISRILLDRMEIINLSGYITDEKVQIFQRYLWKKVLAKNGVTSYGIEFDKKAVVSLIDSYSRESGVRGLEKVTDKLVRKIAMKIVKKEPFPKVILEKNLEMFLGVPKFTNERMVRTSVPGTALGLAWTSVGGATLLIEALFVKGKGGILLTGMIGKTMEESSNIALSYIKNFLNKDELFNDRMIHLHVPDGATPKDGPSAGITMATAILSLALNIKVKAGYGMTGELTLTGEVLAIGGLREKIVAAKRVGIYKIIYPKDNLQHLEEIPDYVKKGMSFFPVSRYEEVAAMVFDEKVLLKVNPSFKENLKLITTSAGKTALKKKTVSKKRITPSK
>CP024871.1|AZQ01131.1|580588_581713_+|DegT/DnrJ/EryC1/StrS-family-aminotransferase
MGVPFIDIKRFEPGLLEEWEEKVKILSKNASFIGGEEVSLLERNLASQAETNYSVACANGTDALQLALRALGVGKGDAVLLPDSTFWATFESVVNVGADPYTVDTDPDDLQMDFTVFEKALEKVKPKAAIIVHLYGWGSARLEDFRKLCKLKGIPLLEDGAQCYGVRYRGTSIYKDALIATTSFYPAKVLGGAGDGGAVFTNDEKLANKVRMLANHGRISHYAYGDVGWNSRLDTLQAAFLNINLKHLEARIVSRRKIAQRYYEILPNLGIRVIHPPKDYEENGYCNVTLAAAEERSLIQDVLKEKEIGFGNIYPGAMSDQPGAKSYIKEKFGDKHTTGKICASVLNYPLFPYMKEEELEEIFSAIRAYNSKKK
>CP024871.1|AZQ03640.1|582056_582539_+|DNA-starvation/stationary-phase-protection-protein
MKDIDIGISEKNRETINTGLQKLLADTYILYFKTHSYHWNVTGPQFNTLHLMFQTQYNELWLSIDLIAERIRSLGFYAPSSSHQLGKLTSIHEEGGVPHAEDMVRHLVGGHETVIRTARSLLPAADEGGDEVTLDLLTQRLEVHEKTAWMLRSLLIVENT
>CP024871.1|AZQ01132.1|582921_584403_-|aldehyde-dehydrogenase-family-protein
MPTIQESPVKLPYSDLTPTLPSIDKTEIERVFHLQKKHFHKVMKLTTASQRIQRLKKLREAIFKYTPEIEKAVNADFRKNEREVDITEIMPSISEINDAIKHVRRWMKPVNAKTPVTLFGAKSQILYEPRGVVLIIGPWNYPFYLTFAPLAAAIAAGNTVLIKPSEFTPVTSNLIQKIITEVFPKEEVAVFEGDYQVSGALMELPLDHIFFTGSTQVGKIVMTAAAKHLTSVTLELGGKSPAIIDKSADIKKAAKKLVWGKVLNAGQTCVAPDYLLIPNDLIKPFVEEAKSVIKEFYGKDGKALKENPDFCRIVNDRNFNRVSGYIHEAVEKGAKIEMGGETDASQNYIEPTLLSNVPENSNIMEDEIFGPILPMIPYTNLDEAIEKINSKPKPLALYIFGKKERPIKKILKETSSGGVAVNDVILHLVNPYLPFGGVNHSGHGSYHGYFGFKAFSHERSVLRQAALSSIGLMYPPYTNFVKRLVTLTKKFLV
>CP024871.1|AZQ01133.1|584484_584688_+|hypothetical-protein
MDSESNSFYKVRTCSLSGYLSKQLRFSIFLFLRTNCRFLIRTESGEFRIYETLYPNFIMRQESEKNG
>CP024871.1|AZQ01134.1|585043_586570_+|HDOD-domain-containing-protein
MSQNKTLEFHHHSDLGLYSNLKDLDHPVLENSPVHYRFHNLTEDVDSIISRTLDRYLLQLDIIYVRDSVFTTLKETIANSIKANVKRIYFRELKADIHNPETYKQKILGFKKDYLDNKEKYEELLFKNNFVVLVSFVYNKDMIRIRVMNNVKLSLTEVERINQRIGKAKLYNDLAEAFLEAGDETEGAGLGLVMSLMMLKNDGLSETSYKIESQGDNTSVIIDIPLSVTKENLQLQQTQDILRNIDGLPTFPRLIQDIQAMIEKPNSSIVQIAEVIKKDVALSANILKLANSAAFIRANKVETLDRAIQLIGLKELSQLLFSLGTKQILENKFPVFLSIWEKSNQCAFYCKLIASRTELPKDAVSNLMSAALLHDIGEIILISLEERTMKNIGKISASKEIASAVSMEEAALGITHTKVGALIAEKWNFPDLYAKAMEFHHRPLTVEEEYISYIYPIYLADMMIKINNEEAKYGEIPEKVLQFCKFESAGDFHSFRTKALESFLSRTR
>CP024871.1|AZQ01135.1|586994_587999_-|hypothetical-protein
MNEILSNYNHPRFKTDDLAGHYESWFVRANNPNACQAVWIRYTIFSPKDHPEKAIGELWAIYFDGEKNTHFVSKSEFPIEKCKFHSIPFSVRIGDSELSDSYLLGKAGNNKGPEKFFWDLKISGGSAALFLFPENLYEGNFPKAKVLVGNPRVKVSGSLKLGSQEIQVQNWIGSHNHNWGSKHTDQYAWGQVVGFEEEADSFLELATAKLKIGPIWTPAITPVVFRFKGKDYKLNHPFLSFGRAKYRYFDWNFVANSSEIQIRGRIHAEPQDFACLQYWNPPGGWKYCLNSKIANTELFVKRKEDLIYSKLTSNRKTAFEILTDDFSHGMKPEV
>CP024871.1|AZQ01136.1|588731_589421_-|hydrolase
MSYDKYLFLDVGDTILHLKKSAGETYFEILVEAGFKKEKNAQEFYRKAFLESWHKMHENSPPEHRDKYQFHPGGTQGWWKELLADFLERIPDRVSLEKAFPIIYNKFADPELWTVDPGFWKLKNYCKNENWGLGVISNWDHRLRALLEAKEISEYLNPIIVSAEFGYEKPSPKIFEEAMRLVRLSGDCLVYCGDKYELDVVVPRSLGWRSYLKNKKGDLESLSELIRFL

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Crispr_ID: CP024871_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP024871_2

846409-847350

Orphan

I-E,II-B

Consensus_repeat	Method
CGGTTCAACCCCACGTGTGTGGGGAAAAG	PILER-CR
CTTTTCCCCACACACGTGGGGTTGAACCG	CRISPRCasFinder
CTTTTCCCCACACACGTGGGGTTGAACCGNN	CRT

15 spacers

The CRISPR arrays of CP024871_2

>merge|CP024871|2|846409-847350|PILER-CR,CRISPRCasFinder,CRT
CTTTTCCCCACACACGTGGGGTTGAACCGAAAGCACACCCTTTGTATACATGTTTTTCCAACTTTTCCCCACACACGTGGGGTTGAACCGGATATTACCAGTAAGCTCAAAAAATGTAGCAACTTTTCCCCACACACGTGGGGTTGAACCTCGACTTGAGCGTCTTTTTCTTTATTCCACCATCTTTTCCCCACACACGTGGGGTTGAACCGAAATCTATCAAGTGGAAGTCTCAGCGGATCTGCTTTTCCCCACACACGTGGGGTTGAACCGCGCATCAGAACAATCCAATGAAGACTCAGGGCCTTTTCCCCACACACGTGGGGTTGAACCGATCGTGGATCGACTTTGCTTCCTTTGCCATCTCTTTTCCCCACACACGTGGGGTTGAACCGTCCCGCCGGTTTAATTCATCAAACATTCACATCTTTTCCCCACACACGTGGGGTTGAACCGTCGCACCACTGCTGGAACCTGTCCATCGCCAACTTTTCCCCACACACGTGGGGTTGAACCGTTTATGAATCCACATCCAGGAGAAATGCTCGCCTTTTCCCCACACACGTGGGGTTGAACCGTCTATGTTGACATTTTTTTATCTCCAATTCCACTTTTCCCCACACACGTGGGGTTGAACCGTGGTCACTCCTCGGATTTCTTTCTGTAGTCCTCTTTTCCCCGCACACGTGGGGTTGAACCGTCAGTCGGGATTGTTCGGATCGAACATACGGGCTTTTCCCCACACACGTGGGGTTGAACCGTAGGCTATAGCTATAACATTTATTGCCATAGCCTTTTCCCCACACACGTGGGGTTGAACCGCAAACTGGCCAAATTTGACCAGTTTACGTTTTCTTTTCCCCACACGTGGGATTGAACCGTTTTCCCATCCTTCGCTTGCGCGTTTCATTTGCTTTTCCCCGCACACGTGGGGTTGCATTA

>CP024871|2|2|846409-847169|PILER-CR
CTTTTCCCCACACACGTGGGGTTGAACCG	AAAGCACACCCTTTGTATACATGTTTTTCCAA
CTTTTCCCCACACACGTGGGGTTGAACCG	GATATTACCAGTAAGCTCAAAAAATGTAGCAA
CTTTTCCCCACACACGTGGGGTTGAACCT	CGACTTGAGCGTCTTTTTCTTTATTCCACCAT
CTTTTCCCCACACACGTGGGGTTGAACCG	AAATCTATCAAGTGGAAGTCTCAGCGGATCTG
CTTTTCCCCACACACGTGGGGTTGAACCG	CGCATCAGAACAATCCAATGAAGACTCAGGGC
CTTTTCCCCACACACGTGGGGTTGAACCG	ATCGTGGATCGACTTTGCTTCCTTTGCCATCT
CTTTTCCCCACACACGTGGGGTTGAACCG	TCCCGCCGGTTTAATTCATCAAACATTCACAT
CTTTTCCCCACACACGTGGGGTTGAACCG	TCGCACCACTGCTGGAACCTGTCCATCGCCAA
CTTTTCCCCACACACGTGGGGTTGAACCG	TTTATGAATCCACATCCAGGAGAAATGCTCGC
CTTTTCCCCACACACGTGGGGTTGAACCG	TCTATGTTGACATTTTTTTATCTCCAATTCCA
CTTTTCCCCACACACGTGGGGTTGAACCG	TGGTCACTCCTCGGATTTCTTTCTGTAGTCCT
CTTTTCCCCGCACACGTGGGGTTGAACCG	TCAGTCGGGATTGTTCGGATCGAACATACGGG
CTTTTCCCCACACACGTGGGGTTGAACCG

>CP024871|2|2|846409-847350|CRISPRCasFinder
CTTTTCCCCACACACGTGGGGTTGAACCG	AAAGCACACCCTTTGTATACATGTTTTTCCAA
CTTTTCCCCACACACGTGGGGTTGAACCG	GATATTACCAGTAAGCTCAAAAAATGTAGCAA
CTTTTCCCCACACACGTGGGGTTGAACCT	CGACTTGAGCGTCTTTTTCTTTATTCCACCAT
CTTTTCCCCACACACGTGGGGTTGAACCG	AAATCTATCAAGTGGAAGTCTCAGCGGATCTG
CTTTTCCCCACACACGTGGGGTTGAACCG	CGCATCAGAACAATCCAATGAAGACTCAGGGC
CTTTTCCCCACACACGTGGGGTTGAACCG	ATCGTGGATCGACTTTGCTTCCTTTGCCATCT
CTTTTCCCCACACACGTGGGGTTGAACCG	TCCCGCCGGTTTAATTCATCAAACATTCACAT
CTTTTCCCCACACACGTGGGGTTGAACCG	TCGCACCACTGCTGGAACCTGTCCATCGCCAA
CTTTTCCCCACACACGTGGGGTTGAACCG	TTTATGAATCCACATCCAGGAGAAATGCTCGC
CTTTTCCCCACACACGTGGGGTTGAACCG	TCTATGTTGACATTTTTTTATCTCCAATTCCA
CTTTTCCCCACACACGTGGGGTTGAACCG	TGGTCACTCCTCGGATTTCTTTCTGTAGTCCT
CTTTTCCCCGCACACGTGGGGTTGAACCG	TCAGTCGGGATTGTTCGGATCGAACATACGGG
CTTTTCCCCACACACGTGGGGTTGAACCG	TAGGCTATAGCTATAACATTTATTGCCATAGC
CTTTTCCCCACACACGTGGGGTTGAACCG	CAAACTGGCCAAATTTGACCAGTTTACGTT
TTCTTTTCCCCACACGTGGGATTGAACCG	TTTTCCCATCCTTCGCTTGCGCGTTTCATTTG
CTTTTCCCCGCACACGTGGGGTTGCATTA

>CP024871|2|2|846409-847350|CRT
CTTTTCCCCACACACGTGGGGTTGAACCG	AAAGCACACCCTTTGTATACATGTTTTTCCAA
CTTTTCCCCACACACGTGGGGTTGAACCG	GATATTACCAGTAAGCTCAAAAAATGTAGCAA
CTTTTCCCCACACACGTGGGGTTGAACCT	CGACTTGAGCGTCTTTTTCTTTATTCCACCAT
CTTTTCCCCACACACGTGGGGTTGAACCG	AAATCTATCAAGTGGAAGTCTCAGCGGATCTG
CTTTTCCCCACACACGTGGGGTTGAACCG	CGCATCAGAACAATCCAATGAAGACTCAGGGC
CTTTTCCCCACACACGTGGGGTTGAACCG	ATCGTGGATCGACTTTGCTTCCTTTGCCATCT
CTTTTCCCCACACACGTGGGGTTGAACCG	TCCCGCCGGTTTAATTCATCAAACATTCACAT
CTTTTCCCCACACACGTGGGGTTGAACCG	TCGCACCACTGCTGGAACCTGTCCATCGCCAA
CTTTTCCCCACACACGTGGGGTTGAACCG	TTTATGAATCCACATCCAGGAGAAATGCTCGC
CTTTTCCCCACACACGTGGGGTTGAACCG	TCTATGTTGACATTTTTTTATCTCCAATTCCA
CTTTTCCCCACACACGTGGGGTTGAACCG	TGGTCACTCCTCGGATTTCTTTCTGTAGTCCT
CTTTTCCCCGCACACGTGGGGTTGAACCG	TCAGTCGGGATTGTTCGGATCGAACATACGGG
CTTTTCCCCACACACGTGGGGTTGAACCG	TAGGCTATAGCTATAACATTTATTGCCATAGC
CTTTTCCCCACACACGTGGGGTTGAACCG	CAAACTGGCCAAATTTGACCAGTTTACGTTTT
CTTTTCCCCACACGTGGGATTGAACCGTT	TTCCCATCCTTCGCTTGCGCGTTTCATTTG
CTTTTCCCCGCACACGTGGGGTTGCATTA

Protein	Signature genes	Signature genes Name	Protein_function
CP024871.1\|AZQ01322.1\|848334_848637_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|366690
CP024871.1\|AZQ01316.1\|840896_841508_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|215619
CP024871.1\|AZQ01325.1\|853957_854275_-\|hypothetical-protein	unknown	unknown	unknown
CP024871.1\|AZQ01329.1\|859303_861205_+\|DUF1561-domain-containing-protein	unknown	unknown	gnl\|CDD\|284921
CP024871.1\|AZQ03674.1\|833585_833783_-\|hypothetical-protein	unknown	unknown	unknown
CP024871.1\|AZQ01321.1\|847525_848263_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372671
CP024871.1\|AZQ01317.1\|841875_842187_+\|hypothetical-protein	unknown	unknown	unknown
CP024871.1\|AZQ01326.1\|854903_855164_+\|hypothetical-protein	unknown	unknown	unknown
CP024871.1\|AZQ01319.1\|844535_845303_+\|membrane-binding-protein	unknown	unknown	gnl\|CDD\|225405
CP024871.1\|AZQ03675.1\|838634_839477_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372314
CP024871.1\|AZQ01327.1\|855376_857278_+\|DUF1561-domain-containing-protein	unknown	unknown	gnl\|CDD\|284921
CP024871.1\|AZQ01324.1\|853757_853937_-\|hypothetical-protein	unknown	unknown	unknown
CP024871.1\|AZQ01318.1\|842361_842661_+\|hypothetical-protein	unknown	unknown	unknown
CP024871.1\|AZQ01315.1\|839678_839879_-\|hypothetical-protein	unknown	unknown	unknown
CP024871.1\|AZQ01323.1\|850169_852839_-\|collagenase	unknown	unknown	gnl\|CDD\|366791
CP024871.1\|AZQ01328.1\|857438_858668_+\|IS256-family-transposase	unknown	unknown	gnl\|CDD\|307151
CP024871.1\|AZQ01330.1\|862010_863030_+\|tryptophan-tryptophylquinone-biosynthesis-enzyme-MauG	unknown	unknown	gnl\|CDD\|163503
CP024871.1\|AZQ03673.1\|836240_837470_+\|hypothetical-protein	unknown	unknown	unknown
CP024871.1\|AZQ01314.1\|837495_838152_+\|hypothetical-protein	unknown	unknown	unknown
CP024871.1\|AZQ01320.1\|845280_845481_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP024871.1\|AZQ01322.1\|848334_848637_-\|hypothetical-protein	gnl\|CDD\|366690	pfam01527, HTH_Tnp_1, Transposase. Transposase proteins are necessary for efficient DNA transposition. This family consists of various E. coli insertion elements and other bacterial transposases some of which are members of the IS3 family.	3.83544e-15
CP024871.1\|AZQ01316.1\|840896_841508_+\|hypothetical-protein	gnl\|CDD\|215619	PLN03185, PLN03185, phosphatidylinositol phosphate kinase; Provisional.	8.86317e-06
CP024871.1\|AZQ01328.1\|857438_858668_+\|IS256-family-transposase	gnl\|CDD\|307151	pfam00872, Transposase_mut, Transposase, Mutator family.	3.34056e-136
CP024871.1\|AZQ01329.1\|859303_861205_+\|DUF1561-domain-containing-protein	gnl\|CDD\|284921	pfam07598, DUF1561, Protein of unknown function (DUF1561). A family of paralogous proteins in Leptospira interrogans.	0
CP024871.1\|AZQ01327.1\|855376_857278_+\|DUF1561-domain-containing-protein	gnl\|CDD\|284921	pfam07598, DUF1561, Protein of unknown function (DUF1561). A family of paralogous proteins in Leptospira interrogans.	0
CP024871.1\|AZQ01321.1\|847525_848263_-\|hypothetical-protein	gnl\|CDD\|372671	pfam13683, rve_3, Integrase core domain.	2.13481e-31
CP024871.1\|AZQ01330.1\|862010_863030_+\|tryptophan-tryptophylquinone-biosynthesis-enzyme-MauG	gnl\|CDD\|163503	TIGR03791, TTQ_mauG, tryptophan tryptophylquinone biosynthesis enzyme MauG. Members of this protein family are the tryptophan tryptophylquinone biosynthesis (TTQ) enzyme MauG, as found in Methylobacterium extorquens and related species. This protein is required to complete the maturation of the TTQ cofactor in the methylamine dehydrogenase light (beta) chain.	1.7253e-108
CP024871.1\|AZQ01323.1\|850169_852839_-\|collagenase	gnl\|CDD\|366791	pfam01752, Peptidase_M9, Collagenase. This family of enzymes break down collagens.	4.62407e-48
CP024871.1\|AZQ01319.1\|844535_845303_+\|membrane-binding-protein	gnl\|CDD\|225405	COG2849, COG2849, Uncharacterized protein conserved in bacteria [Function unknown].	3.69265e-14
CP024871.1\|AZQ03675.1\|838634_839477_+\|hypothetical-protein	gnl\|CDD\|372314	pfam12784, PDDEXK_2, PD-(D/E)XK nuclease family transposase. Members of this family belong to the PD-(D/E)XK nuclease superfamily. These proteins are transposase proteins.	4.26788e-52

>CP024871.1|AZQ01320.1|845280_845481_+|hypothetical-protein
MSNTRSFKCCVADWNEEIHLEFKIPLKKFELRTGQTYHIEGLFSTRNLLIIKTGFFPFRREKSRSV
>CP024871.1|AZQ01319.1|844535_845303_+|membrane-binding-protein
MKFRTILVFSFLFTVSLWGEPPRPSNVPKGAIYNEKYKNFILEEKEEPFLKRTEWNTLGVLESEVYSLEGLTDSTHYIDGRWYSRKQYYGFDIDKAKILPPREKPSSIPKESEFNFDFRKWELGETKEGKKEGVWKLWWPAGQEAGSVEYKNGVYEGKFHLIWENGKTKETCTYVFGKRDGEQLIYHESGNLNEKVKYIHGLEEGEWLKYFDTGDLQYRVTFIKGMGTMQERFENGKLKERKYYKNKKIVKHEKF
>CP024871.1|AZQ01318.1|842361_842661_+|hypothetical-protein
MKEYIQKTIKLENGDRVILYDSDKIKGKIPVFEFNRNVIKVDKNDVILWRIKVPGKDDWEAPFLKIKLRQGKLIAYHWAGGEFEVNLEDGSIKLIQEHR
>CP024871.1|AZQ01317.1|841875_842187_+|hypothetical-protein
MSGPHGSTADLQREIEISKQIEFLRTTKVQNGISILENAEIKIPPQEIEELEQTGQLDKVLNIYKKSGSEGLKSYIAGRASGFGALDGFFPDFSDMAKNPGFT
>CP024871.1|AZQ01316.1|840896_841508_+|hypothetical-protein
MITKYIRNWLIAGAVVLAAFYYIPRINFSCIEGDCYSGEGVYTYNNTYYYGSFQKGYRHGYGMEKYPGGCTYYGFFEGGHKQHYGSYVCEKDNYSFTTFWNNGGYHSTVFYTCGNKTYYGKWAGFRGTLICISGDCENGVGKAILPFKKIIQSGKFTSSNLYGHGEEIDACTGKILYKGKFIHSHKEKDYDAEAHKPVQGLDY
>CP024871.1|AZQ01315.1|839678_839879_-|hypothetical-protein
MSQNLKSNQHQLTLSCWSFFYPISVKVSSYHFTFLNDTPVFRNQLSTFGVDSCTAKLHNLVICVKS
>CP024871.1|AZQ03675.1|838634_839477_+|hypothetical-protein
MFKTLFVKEPKLLISMLNSVIFTNQEHRIQELTILNPELTGPSAKDKRSYLDIRAKDETGRIFHVEIQVAHENSFVKRSLYYLSGLIRDQLKSGEGYSDLKAVYQVNIVDFNLIPSENYHSKFKFREESNPEITLTDELEIHYIELPKLTEEDHLRLLREGSDLYRWMYLFKHTSELTEEEMSILVDKTPDLSKAFTILEQYSNDPKKRKEIEEKLKSDRDYVYDLAARFEAGERQGIEKGEFKKALEAARKMLAEGIKLDVVLRVTGLTEKDLGDHGIR
>CP024871.1|AZQ01314.1|837495_838152_+|hypothetical-protein
MSRIVFFSLIFCLSFCRERVMFSTDDSVAYRVIFEGKIKKIGKIYPDFPLVVKTDFLPNYEMVDRFLDKELFNESFFTFAKGLVKKEINVSSYRLFYNRGEKTAFSRSPYMWILVYADKAALIRAGYISQRTREEPFIGAKYWICNFDNSDIQETKFVNCKKGEKRSELDTSFVPLVSEVKDDGQPDIVCTNLAESEITCNSEGSNYIGIKSDKFYIR
>CP024871.1|AZQ03673.1|836240_837470_+|hypothetical-protein
MGLSYDTKAGYGASIGLTSQFGPMSVTPSWTVSEYGGLSSDVQYGFDRNLFNKTNNPDHASANRNLLSDIFDGMSGLASGFGRGAKSAWDGMAGAVGGLNGENLSNGWNAIKNALFGGGDLFARTATNGNIYRQSDGSLTDSNGNRFVLDGNGNLIPEDENLILVGKTGKKNGKYDSNSKTRYLDRQSNIAGQLENESQGYIKQALTKFFGELSNEVTNAESIKYQKKISDMIKSGEFDKAILSPIDDSEDFDGQMSDLNEAREKVLDQYDEYYNNQNLPLGNNGIFTDALNFVYNLFGKSSGNVRELLMNTIESGMETGMSASTREQRQKGLIKLAESTAGGGFQGDIGEAMRNFDLKNRDGSWMNGGNQYDATNQQYRALSSPLSNYEKMFVLQMYVLRKQELNRLY
>CP024871.1|AZQ03674.1|833585_833783_-|hypothetical-protein
MFLRFREEKPRSPFQSATQHFNLFVYSDFFIQSMLHCRISTAIAFAVVDRCFVVKKKMRTAGSHF
>CP024871.1|AZQ01321.1|847525_848263_-|hypothetical-protein
MQISRTGFRHRSRLQDKNMELKDRILTLAYKHKRAGYRQIHDFIRQEERVNHKRIYRLYSALGLKYRIKPKRKRVSLPAIPKIVPKKPEERWSMDFMSDSLYSGRKFRILNIIDDFGRFAVATQVEFSITSERLVRILNEVSEVRSLPKQIVVDNGPEFTSKAFLRWAFEKGVDIHFITPGKPTENAFIESFNGKMRNECLNENWFKNIEEAQRLVEDWRNFYNSERPHSSLGGLTPEEYLRRSA
>CP024871.1|AZQ01322.1|848334_848637_-|hypothetical-protein
MKSSQEHKILEENMKKRFSEDQIHKILKESESGISTPELCRKYGISGNTFYRWRSKYGGLELNDLKRMKTLEEENSRLKKLYAELALENEAIKMLLEKKW
>CP024871.1|AZQ01323.1|850169_852839_-|collagenase
MITNIKCKIVLALSVIITFSLGCNSQNNGLKNDLSLFATMFAQTTQQITMRSVTRSVSSLDEPIGFNPIQVENEQDFDKITDGKKRILVPSVMTFGPTHSSSNGTVQNVTSNNCTGSYVARLSPKAFVRFLETHDINCVDKFVWSYDHQYSDYIYSQANMREVVNRLEVLAPSYRGNNDLNFIQLFRMFWAGYYVKASHPSLPFDKDQISQALVAPMRTFANSAHFLDGTNDAGKVLEFFFTAADSTGNGHIIYPGLLSFLEATLNDPQRLTNNRSQMIALNAVFRLLKRHILPQNREFLNRIDFRLIDKLRGFALDTSLNTNSSVWIINNAIFCLDRIYEYLPTFQPRIVSAVTDVLETYPYISQPYLQAVKALTRDSDCADLRIGRICLSDTKEVVKRMVFPNTYYFDDKAQIVHTSLSIDEIQPLYHALKEVESQFFRLIGIHAPVSGDTTDSISMYVYGSQKDYETFHPFLFDLSTDNGGIYIEGDKTFYTYQRTPAESIYTLEELLRHEYVHYLVGRFIIPGLWSQTPAHDNERLSWFEEGIAEFLTGSTSREIRPRKNLISKIKRDGSSRMNLSKILTARYGDFKFYRYSGVFFNYLYTHKKDTLRDLISTLRDSNIQKFDYLITQMSRDTWLNTSFQTYLDYLVGDVDNLTDPSTTAPDLANLSTNSPKVIRSFFRKTNTGSKAKCTTAAFGLNSRFSCRGLILGNAAYSPDWNSAWSDFNSRINDLMSTLENSGVNNFKSMNCRIGEIRFDKHVNLFRPFAIYSCEGPLASRPRISYRHPQRSQTDFRNTRLGQHSTCFANPSTGSGTTCNIPISTIAFSNTATYEEMYQNLNADLNELKSEIYTMRPSFYRKLDCNFDSIDTVNLPDGRKYLAARSSCNL
>CP024871.1|AZQ01324.1|853757_853937_-|hypothetical-protein
MAKYGLPIVISLRTCLKTSECRDFNKNLTIIKSVRKLVNYQRDAICKTPIFYYELTESL
>CP024871.1|AZQ01325.1|853957_854275_-|hypothetical-protein
MGFLPFSIIWAITILHYYVFEIREHIIEEELNLPFLNRIPSFLILKLFKILNPEEYCSRVISSKTNVVLKITSVNSDLLNHENSKPLNNKERTEVLARIFFQRTR
>CP024871.1|AZQ01326.1|854903_855164_+|hypothetical-protein
MQHIQIELQLESAEEIKRWFIEYLHFEIEELILTVLDQDKRSPSWLSIYFSLFLRKFIEVGGYRIVLSYFLVLEFGRENCSTNVRF
>CP024871.1|AZQ01327.1|855376_857278_+|DUF1561-domain-containing-protein
MNRFIVLIVVLLISIGVDFSYGVSPALVHILSSVVSGSIVQKPTDNPKDKAIKIVIHDGGKFCYAPVFSGGESYIQLEQCWEQDVTSARYDVFQRISYYINKTWLCITAPEGVILGERNWDYVHLRPCTINDPLQRWIVKENSFWTADERYRLKDVKWYAYISKKSKDSYNHTLDSSMKDWVQTVATPGNISIKTSIAWNLGNSRYFIHSKGSKKNTTSIYYNPESGHVAQYNPVSGRLSCMYSKVGSYQWNWIRWVLCDDIPTSKDSPAYWDVYLETEEGGMLKDYKGNILRVTRYGSNWGVVYAAKPSFLEKDTTNSPTSLFLVDGYLLDWIRYAAGNLGNTEQYCPAGNKESHVYKRIKRTLPPDFQLTDDWIRRLYQIATSSVTTAQGSGVCGVCLLQGFQMLAELQEYYSQGPLQSGGYFFDTARNRDPFVSFEQRYPLLNRLLTDVPDVYNRVTTASDTNRQLVLASARIMLPQYNWIVSSEFTTRSEIQSHISSLINSPPGSIWLGILGRRRSDGTLGWHAVPILRTSQGLVVIRTRVPSAPFDLYRQALTPTTDLLEVINNLQTPNRTLTRLVTIQLEGGYHNIFDSMISNRDCTGEGDDRRGTGGYPTSTSVNQCLRSCRCALL
>CP024871.1|AZQ01328.1|857438_858668_+|IS256-family-transposase
MSNPKNRAEELLDELIKDKSPEDLLGNEGLLKQLTKSLIERAMQGEMTHHLGYEKNSSLGNNTGNSRNGKSSKKLKGDFGTIDLEIPRDRNGSFEPQIIQKGQTRFTGFDDKIISMYSRGMTTREITQHLQEIYQVEVSADLISEVTDSVLETVIEWQNRPLDKVYPILIMDALVVKVRDGHHVQNKSFYLALGINLQGTKEILGIWVERTEGAKFWLQILTDLKNRGVEDILIACVDGLKGFPDTIISVFPNAQVQLCIVHMVRNSLKWVSYKQKKELMIDLKAIYKSPSAEIAKKSLDDFSTKWDSQYPMISKSWRNNWESVIPFLAYPPNIRKAIYTTNAIESMNMGLRKIIKNRGSFPTDEAAIKLLYLALNNMSKKWTMPIQDWGKAMNQFSIIFGDRLKFDSF
>CP024871.1|AZQ01329.1|859303_861205_+|DUF1561-domain-containing-protein
MNRFIVLIVVLLISIGVDFSYGVSPALVHILSSVVSGSIVQKPTDNPKDKAIKIVIHDGGKFCYAPVFSGGESYIQLEQCWEQDVTSARYDVFQRISYYINKTWLCITAPEGVILGERNWDYVHLRPCTINDPLQRWIVKENSFWTADERYRLKDVKWYAYISKKSKDSYNHTLDSSMKDWVQTVATPGNISIKTSIAWNLGNSRYFIHSKGSKKNTTSIYYNPESGHVAQYNPVSGRLSCMYSKVGSYQWNWIRWVLCDDIPTSKDSPAYWDVYLETEEGGMLKDYKGNILRVTRYGSNWGVVYAAKPSFLEKDTTNSPTSLFLVDGYLLDWIRYAAGNLGNTEQYCPAGNKESHVYKRIKRTLPPDFQLTDDWIRRLYQIATSFSSIGRGQVRGVCGVCLLQGFQMLAELQEYYSQGPLQSGGYFFDTARNRDPFVSFEQRYPLLNRLLTDVPRVYDSIDYSNRQLALASARTMLPQYDWIISSEFTTRSEIQSHISSLINSPPGSIWLGILALLCPDGTLGWHAVPILRTSQGLVVIQTNVRSMPFNIYREYLTPTTDLLEVINNLQTPNRTLARLVTIQLREAYHNIFDFMISNRDCTGEGDDRRGTGRYPTSTLVNQCSRRGGRCTLL
>CP024871.1|AZQ01330.1|862010_863030_+|tryptophan-tryptophylquinone-biosynthesis-enzyme-MauG
MFRILWAVFLIFSLLLIFTCKEEKKEVVRKEGETKKVETIAYPFPPDNAPTPERILLGKTLFFDPILSGSNWISCATCHNPGLAWTDGLKTAVGHNMKILGKNTPTILNGAYGSKMFWDGRADNLEAQALGPISSPDEMNQDIDELILELKNIRGYKELFSRAYPNEDINAVTIGKAIASFERTILSTESTFDRWKKGDKTAISESAQRGFSVFNGKAKCSACHQGDQFSDNGFHNIGLKNASKEVGRFKIVAVKSMKGAFKTPGLRDVALTGPYMHDGSYATLEEVVEHYDRGGDEKNNLDPNMTTLKLTKDEKADLVEFMKSLNGKMISISIPEFPR

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Crispr_ID: CP024871_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP024871_3

2451210-2451327

Orphan

Consensus_repeat	Method
AGAGCGAAGCGACGACTCTTTGCAAAGCAAAGAAATAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP024871_3

>merge|CP024871|3|2451210-2451327|CRISPRCasFinder
AGAGCGAAGCGACGACTCTTTGCAAAGCAAAGAAATACAACAGAAAACTCAAGTAAATACTGTCTTTCTATGGATCACCAAGAGCGAAGCGACGACTCTTTGCGAAGCAAAGAAATAC

>CP024871|3|3|2451210-2451327|CRISPRCasFinder
AGAGCGAAGCGACGACTCTTTGCAAAGCAAAGAAATAC	AACAGAAAACTCAAGTAAATACTGTCTTTCTATGGATCACCA
AGAGCGAAGCGACGACTCTTTGCGAAGCAAAGAAATAC

Protein	Signature genes	Signature genes Name	Protein_function
CP024871.1\|AZQ02526.1\|2456537_2457641_-\|hypothetical-protein	unknown	unknown	unknown
CP024871.1\|AZQ03816.1\|2455611_2456424_-\|hypothetical-protein	unknown	unknown	unknown
CP024871.1\|AZQ02527.1\|2457643_2458555_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|381545
CP024871.1\|AZQ02516.1\|2443649_2444573_+\|flagellar-assembly-protein-FliH	unknown	unknown	gnl\|CDD\|235850
CP024871.1\|AZQ02514.1\|2440977_2442678_+\|flagellar-basal-body-M-ring-protein-FliF	unknown	unknown	gnl\|CDD\|235668
CP024871.1\|AZQ02524.1\|2451365_2451710_-\|DUF962-domain-containing-protein	unknown	unknown	gnl\|CDD\|377609
CP024871.1\|AZQ02525.1\|2452027_2454547_-\|DUF1554-domain-containing-protein	unknown	unknown	gnl\|CDD\|369437
CP024871.1\|AZQ02531.1\|2459922_2461563_+\|chaperonin-GroEL	unknown	unknown	gnl\|CDD\|234573
CP024871.1\|AZQ02517.1\|2444619_2444799_+\|hypothetical-protein	unknown	unknown	unknown
CP024871.1\|AZQ02529.1\|2459159_2459402_-\|hypothetical-protein	unknown	unknown	unknown
CP024871.1\|AZQ02518.1\|2445399_2446767_+\|flagellar-protein-export-ATPase-FliI	unknown	unknown	gnl\|CDD\|274608
CP024871.1\|AZQ02530.1\|2459618_2459909_+\|co-chaperone-GroES	unknown	unknown	gnl\|CDD\|178988
CP024871.1\|AZQ02520.1\|2447495_2448143_+\|flagellar-protein-FlbB	unknown	unknown	gnl\|CDD\|369616
CP024871.1\|AZQ02519.1\|2446770_2447337_+\|flagellar-export-protein-FliJ	unknown	unknown	gnl\|CDD\|131526
CP024871.1\|AZQ02515.1\|2442677_2443646_+\|endoflagellar-motor-switch-protein	unknown	unknown	gnl\|CDD\|224453
CP024871.1\|AZQ02528.1\|2458610_2458796_-\|hypothetical-protein	unknown	unknown	unknown
CP024871.1\|AZQ02523.1\|2449744_2451181_+\|adenylate/guanylate-cyclase-domain-containing-protein	unknown	unknown	gnl\|CDD\|143636
CP024871.1\|AZQ02522.1\|2449053_2449713_-\|oxidoreductase	unknown	unknown	gnl\|CDD\|187560
CP024871.1\|AZQ02521.1\|2448156_2448549_+\|transporter	unknown	unknown	unknown
CP024871.1\|AZQ02532.1\|2463914_2466608_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|369437

Protein	Function_ID	Function_description	E-value
CP024871.1\|AZQ02527.1\|2457643_2458555_-\|hypothetical-protein	gnl\|CDD\|381545	cd19702, bHLH_TS_HEN2, basic helix-loop-helix (bHLH) domain found in helix-loop-helix protein 2 (HEN-2) and similar proteins. HEN-2, also termed nescient helix-loop-helix 2 (Nhlh2), or Class A basic helix-loop-helix protein 34 (bHLHa34), or nescient helix loop helix 2 (NSCL-2), is a neuron-specific bHLH transcription factor that may serve as DNA-binding protein and may be involved in the control of cell-type determination, possibly within the developing nervous system.	0.000185841
CP024871.1\|AZQ02516.1\|2443649_2444573_+\|flagellar-assembly-protein-FliH	gnl\|CDD\|235850	PRK06669, fliH, flagellar assembly protein H; Validated.	6.30643e-65
CP024871.1\|AZQ02514.1\|2440977_2442678_+\|flagellar-basal-body-M-ring-protein-FliF	gnl\|CDD\|235668	PRK06007, fliF, flagellar basal body M-ring protein FliF.	6.22862e-138
CP024871.1\|AZQ02524.1\|2451365_2451710_-\|DUF962-domain-containing-protein	gnl\|CDD\|377609	pfam06127, DUF962, Protein of unknown function (DUF962). This family consists of several eukaryotic and prokaryotic proteins of unknown function. The yeast protein YGL010W has been found to be non-essential for cell growth.	4.93994e-41
CP024871.1\|AZQ02525.1\|2452027_2454547_-\|DUF1554-domain-containing-protein	gnl\|CDD\|369437	pfam07588, DUF1554, Protein of unknown function (DUF1554). A family of proteins identified in Leptospira interrogans.	1.66158e-47
CP024871.1\|AZQ02531.1\|2459922_2461563_+\|chaperonin-GroEL	gnl\|CDD\|234573	PRK00013, groEL, chaperonin GroEL; Reviewed.	0
CP024871.1\|AZQ02518.1\|2445399_2446767_+\|flagellar-protein-export-ATPase-FliI	gnl\|CDD\|274608	TIGR03497, FliI_clade2, flagellar protein export ATPase FliI. Members of this protein family are the FliI protein of bacterial flagellum systems. This protein acts to drive protein export for flagellar biosynthesis. The most closely related family is the YscN family of bacterial type III secretion systems. This model represents one (of three) segment of the FliI family tree. These have been modeled separately in order to exclude the type III secretion ATPases more effectively. [Cellular processes, Chemotaxis and motility].	0
CP024871.1\|AZQ02530.1\|2459618_2459909_+\|co-chaperone-GroES	gnl\|CDD\|178988	PRK00364, groES, co-chaperonin GroES; Reviewed.	2.6333e-42
CP024871.1\|AZQ02520.1\|2447495_2448143_+\|flagellar-protein-FlbB	gnl\|CDD\|369616	pfam07956, DUF1690, Protein of Unknown function (DUF1690). Family of uncharacterized fungal proteins.	0.000230889
CP024871.1\|AZQ02519.1\|2446770_2447337_+\|flagellar-export-protein-FliJ	gnl\|CDD\|131526	TIGR02473, conserved_hypothetical_protein, flagellar export protein FliJ. Members of this family are the FliJ protein found, in nearly every case, in the midst of other flagellar biosynthesis genes in bacgterial genomes. Typically the fliJ gene is found adjacent to the gene for the flagellum-specific ATPase FliI. Sequence scoring in the gray zone between trusted and noise cutoffs include both probable FliJ proteins and components of bacterial type III secretion systems.	3.95681e-09
CP024871.1\|AZQ02515.1\|2442677_2443646_+\|endoflagellar-motor-switch-protein	gnl\|CDD\|224453	COG1536, FliG, Flagellar motor switch protein [Cell motility and secretion].	2.39533e-25
CP024871.1\|AZQ02523.1\|2449744_2451181_+\|adenylate/guanylate-cyclase-domain-containing-protein	gnl\|CDD\|143636	cd07302, CHD, cyclase homology domain. Catalytic domains of the mononucleotidyl cyclases (MNC's), also called cyclase homology domains (CHDs), are part of the class III nucleotidyl cyclases. This class includes eukaryotic and prokaryotic adenylate cyclases (AC's) and guanylate cyclases (GC's). They seem to share a common catalytic mechanism in their requirement for two magnesium ions to bind the polyphosphate moiety of the nucleotide.	4.17502e-65
CP024871.1\|AZQ02522.1\|2449053_2449713_-\|oxidoreductase	gnl\|CDD\|187560	cd05250, CC3_like_SDR_a, CC3(TIP30)-like, atypical (a) SDRs. Atypical SDRs in this subgroup include CC3 (also known as TIP30) which is implicated in tumor suppression. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine rich NAD(P)-binding motif that resembles the extended SDRs, and have an active site triad of the SDRs (YXXXK and upstream Ser), although the upstream Asn of the usual SDR active site is substituted with Asp. For CC3, the Tyr of the triad is displaced compared to the usual SDRs and the protein is monomeric, both these observations suggest that the usual SDR catalytic activity is not present. NADP appears to serve an important role as a ligand, and may be important in the interaction with other macromolecules. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	2.74139e-86
CP024871.1\|AZQ02532.1\|2463914_2466608_+\|hypothetical-protein	gnl\|CDD\|369437	pfam07588, DUF1554, Protein of unknown function (DUF1554). A family of proteins identified in Leptospira interrogans.	1.3146e-45

>CP024871.1|AZQ02523.1|2449744_2451181_+|adenylate/guanylate-cyclase-domain-containing-protein
MNFFLFYERIFFKINFSSRKELISNPEVSILNFVNILLSIKKALRTLDRKSMPDSVLEVLKKEERSGIIITNYFRYLIALFFLVQIVVNVNNGNHKFNLIAFLIYLSLTFVHTIVIRVSPLSVISVFNYITLFTEYLLILGVLLFYTFTTKNVDLGFALKNPINLFFLFPIIYSLLQFKIRFVFIGLFLFYLIYYSILWVAASQGQLIYTKDWGSYVNGPNILIEDIVAGKPGLYFCFAMMISMGIFRTISMVKRIGIVEGQKTELSRYFSPKIVNEMVENPETFQNGNRQIVSILFLDIRNFTSMSENMDPKELGELLSEFRKIMTECVFENNGTLDKYIGDAVMATFGTPHPSPSAEVDARNAVGCGVIMQKRLAEWNLLRKSEGKAPISIGIGIHTGEVFAGNIGSDLHREYSVIGDAVNTASRIESLCKVLKKHFLISKETMELLGGKYILNRMPRVKVKGKEEPLQIYEVVWG
>CP024871.1|AZQ02522.1|2449053_2449713_-|oxidoreductase
MAQKLALVAGATGLIGKYLLEELSTSAEYQKVYALVRRPGSVAGVEEIVSDYDALVASLFPQGITDVFCSLGTTISKAGSQENFKKVDYEYVLKFAKLVKEIGAKSFFVVSALGANPDSLVFYNRVKGEMERDLKNIDFSFLGIFRPSLLEGEREEVRPGETLGQFFAKIVNPFLLGGIRKYRSIHGRTVAKAMIRIAKKEATGVRILESDQIAIVGEN
>CP024871.1|AZQ02521.1|2448156_2448549_+|transporter
MNFVIRLLFITFVFLLLLESSIIAKKNANSSSPKVSGYELVSNPSAAFGKTIQISGTVSEILYKGNSIRFLVYFSGKPVALDSDSTSLISSIQVGSYVSVCGFYLKDRELKSNGVLTSMPFILVDSPNCR
>CP024871.1|AZQ02520.1|2447495_2448143_+|flagellar-protein-FlbB
MASLSDKARATYLILLILFLLGIGFFVFDYFQIINAAELLPFLRKEPALVNQDNESPTELQKLEFAKAQERFAEELDELEKRKTELLAEKGKLEAEMEKLEEMRQGLITKEKEMKSADSEKNSRQKLVKVLADKVGNMPPESAVGMLTNWPDGDIIDVFIQMDKDAEDDGRPTITTYLLTLFPADRRAMITNKWLSRSSGIKTPGIPDDAIEANP
>CP024871.1|AZQ02519.1|2446770_2447337_+|flagellar-export-protein-FliJ
MKRFQFNLEPVLNLRKKKEDEKLKSFSLVAGEINQIRNSIRENERQIEFLTGDSASLHGASLRDYQLHQGYIRSLITQNENLESDIKDKKPELDAKRAELILAQKDRKILEILKENQYKAYKKLYFKREKFELEEHYNQLKSIQWRKNYESSEPEPAPRIFTYDTSSRTENDESGASEIKKLYDKYKR
>CP024871.1|AZQ02518.1|2445399_2446767_+|flagellar-protein-export-ATPase-FliI
MIEKKFHEKIDVMSKYFLIMDRTETIRKSGKVIRVSGNVIYSEGPPDSKIGELMDVQKSGKEGYLQCEIVGFEGHVYTLMPLGPIEGVYPEAFVFSSGRKLAIPVGKELLGRVLNGVGRPIDKKGHIITKEERGPDNDVPNPLDRPIIRDILMTGVRAIDGILTIGRGQRVGIFSGSGVGKSSLLGMIARYTNADINVIALVGERGREVNEFIEIDLGKEGLQKSVVLAATSDAPKMEQVNCALLATSIAEYFRDQGKHVNLMMDSLTRFAQANREISASNHEPPITRGFSSSVFSKLAKLVERSGTSKSGGTITGFYTVLTEADEMEDPIADAVRGYIDGHIILNRKLAEKNHYPAVDVPASLSRVMARIAPENQNLRAGMIRELISVYNSAEELIRLNAYVSGSDPRVDLAIRKKDKIDRYLKQKIQERSTYSQAVQGLKEILEDDEQEKEEF
>CP024871.1|AZQ02517.1|2444619_2444799_+|hypothetical-protein
MENTPNKQEKALKILSKRKKTFDYKIVNLIYEKFWKDKSFYEANFRIYLNSKNTKSAVF
>CP024871.1|AZQ02516.1|2443649_2444573_+|flagellar-assembly-protein-FliH
MAKLVFKPIQIADIKDQVELAIPDKYKKFHRDEDAEEFEVDQEGNIIEQYQGPSIEEIEAELSRYREENEEQVRKLLEDARRKSEEIEEEGRKRAFQMIQDSKEKVKLEEDTGKAKAEQILDRAKMEVERMIKEAEMKVAEIEHEAYLKGYDAGREVGFKKGQGEVRRLIDRLGTIVGKAIDIREEIIQASEKQMVEMILIIARKVIKDEIIERKEIVLNNIREALKRIKDRDRVDIRVNFADLELTTAHKDELIKLMESLRKVNIYEDSRVDRGGVIIETDVGAIDARISTQLKEIEEAIRNAEPI
>CP024871.1|AZQ02515.1|2442677_2443646_+|endoflagellar-motor-switch-protein
MNPLSSRQNRAGSLLRILGEHLPPEVYRHLGPEETGKLLETFHKTGKPDSKEEREILSSFLNSLSKIRKEESIDPEGLNLIRELEALLKEEKEEKDLLQELKTKSTEEISRIVSGEKPSMIALILCFGNPDAAAAVLNDFPEKMKEEILIQIHDLDLSSEYEKNRLERFLKFKLEALALEEKSLPINNPMGKKAADLLGRLRPGDSQKIFDRIREKRPGFAENIMEHFFRMEDLLYLEREPLNRFFSSFHPIVLACAFKGTEMEVQTRILEKLEPALSSSIRLESDSMGPISLAEMETAQNGILERLRDEIEEGSIKFWRAT
>CP024871.1|AZQ02514.1|2440977_2442678_+|flagellar-basal-body-M-ring-protein-FliF
MPEQVQKILNNIREFFTTLDTTKKLILGGVALTVLVAIGILSTISLQKNRVVLFKDLTSKDFAEVTKKLDSLGYQYGSSDTSVITVDPEQRQEIVTKLAQENLIPAGVQGWELFNVDKFTETQFDKDIKKYRALKGAIEQSLMTLRSVDKAYVNIAFPEDELFSSNSSPVKASVILHYIPGVESLSRKEVKGIVNLVSRAVPKLKPENVSVADADGKIISDFEEDLEKERLELRIVQEKLRIGEEQRIQRLIDMRNTLRWLLGGEDRVDITRFEYNLNWDKESYKDNSVSPVVAIPDNPNTPYSELKLVDGYSLKVSSKETKEDFKGRGFTPDGPAGTEPNIPPGYKDTDYQKSEYSKSENINNYEFNRRVSEVQKQPWKVEKVNLSVVIDGMWEKKEKEDGTGYDRKYIPVSEDELRQIRKNLESAVGIDKARGDQISVITIPKDRSSQFAAEDEELRKQKAIRQMIIASLIIILLLIVSILVYRAVKKEIARRRRLREEELAAQQQMMREAALRVMDEGGAEVELSLDEKYRRELLENAINLAREKPEEVAQLLRTWLSEEEAS
>CP024871.1|AZQ02524.1|2451365_2451710_-|DUF962-domain-containing-protein
MTTETTPKTYTTFKEFWPFYLGEHSHPVNRALHFIGTSFAIGWILAAIANFDPFYILAGLFSGYFFAWIGHFFVEKNRPATFTYPLKSFMGDWVMYFYILTGQIGKELEKIGKK
>CP024871.1|AZQ02525.1|2452027_2454547_-|DUF1554-domain-containing-protein
MLKCILKKIYFCSFVFVTAFFGGCGEGKNSNSFGISSLKNSILNLVDSHSNNLTVVPSGGLYVFVTSYTNSSSVSPLTHNGNFAGISGADAYCNSHIPSGLPGTGSYKAMLVDGINRVATTVGSNSSSGQKDWVFQKNTSYYRADGRMVFTTNDAGLFDFSAGNLSNAFADSFYVWDFGIWTGLQSNWKTVPSTQLCSSASLPWTSGSVSVSGGIGYANYNNGASISAGSIPCQWKEAQDPNSQGSMEMGILCVQEKPITFKAKIGFLEDEQCHHQNIGSSPFTIPWKQCHEFKRHFDPATGVAISSDVSAPGSYRPLPGQVHLNFFSSTQTNPTGCYVSNLQNDLDGNIAVQVNSCLKTIPTPDRVRITVVLDYKTNLAYNNSTGTIRALWNKTDVTALNYLPYDQSKFFQTLYVDLDNQSKVGLYFETVLPLSPYWDETTKTYDLATVNILNSVSPSLANSMRLTLSNWQGAVELHNRVKSESIDKIQFDMFQNDPSKKCNRCYTLNFTNSYASGAIPGNLYFLGPVLNAIVIYPVDNPLSHEFGHTLAFSAAPNLSLAENNWAGQFRDSNNHNYARSHSIYQYQDMVTALTEGIVNPIGRYLISGNRGTWRYDPFALYFGTYQYGWQLTPVVDQQYSDFQRFRYEMWKRGIVENSPEWNSRLQNIQGINSTFTDYKTNSNNEMRYDAFGHYLLQVAPFHIDCWNATGSNASNLHLLSYKYDQMKLLSELLDGGPVSYKSTTYGDVVHPKNTVISLKDLLITLNELYDGSPLPANGTPGFTDKVLSIKSPFSPQSLGWKLIQKGLISKSEVDNLFRAVGMDQLSNICGYPWALPDCQ
>CP024871.1|AZQ03816.1|2455611_2456424_-|hypothetical-protein
MIDFSKYLPKKTIEIDVDKQAQIEFSFFPDKKNQSKSQTPLSSILSPTFEPNTLIVPAETKLILSLNSYCLKSSGAGPYPNEPYKVIYVNEVNEIRRLLNSMWGQCNSRQDVQSVAWNIMNRVPHNSLPSSQKQMLGLSGILQAVEDIPILGLGIKIAKVPVSVAKDVVVYSVENFASIEAEIINRKSEHQIPSRPEPSRHGPFFIEVLSTRGFSGVTISVYNYTTKPAKFQAHEFQLQPERKDVQPLAIELSRTFACNYKKLKPIEQIR
>CP024871.1|AZQ02526.1|2456537_2457641_-|hypothetical-protein
MKYNYSLIFHSIVSVLKIISSTILFLNCGVTGFSGSKSYFRIPARTETEVFHTSLSKGEVKNLYGINLGVVNTVQENLMGIQVGGANVSEGNTYAATQVALYNAANNAGFALQVGGSNKVQGAAGIQLGFYNSERGKKAKRFQVIGEIRGENNSEIGVGMNKEEKGIIAIQAGGINHAESSAGIQVGLYNDEENGVFTVQAGGLNFTKESDSGIQLGIYNAKTAPGLYLTLGAINSGGGGVTLGVINFNGRNGSGLNAGVLYNSGGKGINVGAINGGTGVNLGVINSYSKGLTVGVVNTNSTGLNMGAINKGMGFNLGILNINNEGKGFNIGALNIGGEGNFQIGVVNICPNGVLPITILLNYCYKD
>CP024871.1|AZQ02527.1|2457643_2458555_-|hypothetical-protein
MRIHPLFFIFLFNCGLALTPQITTTIPPQKKETKIEVIRFNILYGELMNLIGVNLGIVNMVENRMIGAQAGIVNLSKKDSYGVQISAYNASEAKIVGAQAGIVNTSGNTYGVQAGIVNTSRRDTYGAQVSLYNSSQNQMVGTQIGIVNSSQGNTYGAQIALVNTAKDKGAGIQAGLVNYSEGQSNGLQAGIVNVGSQRNGFDLTVGAGNFQTKGMVIGGLNLYSEGVNVGIMNEQGNGFNLGALNIQGKGINVGILNGGTGIHIGLINSAGEEDTDEPTLEFGLLNFCGKGILPVMILFNYCR
>CP024871.1|AZQ02528.1|2458610_2458796_-|hypothetical-protein
MYFTRHAFILFLWYVSVDCNSGEVCFLAYTLYSASRFWELVFPLRLNRFLKVLETNFFLEK
>CP024871.1|AZQ02529.1|2459159_2459402_-|hypothetical-protein
MWEFSHFKDRFIQTKTISVFFFSIADRKKTSADENLYRAWGLQFEGGRQEQSVRSNLDYYIFRLFAKLTVNFWYRFHTSE
>CP024871.1|AZQ02530.1|2459618_2459909_+|co-chaperone-GroES
MASIKPLGDRVLVEPRQEAEEKIGSIFVPDTAKEKPQEGKVVEIGSGKYEDGKLVPLEVKVGDTVLYGKYSGTEIKSEGKEYLIIRESDILAVVKK
>CP024871.1|AZQ02531.1|2459922_2461563_+|chaperonin-GroEL
MAKDIEYNETARRKLLEGVNKLANAVKVTLGPKGRNVVIDKKFGAPTITKDGVTVAKEIELEDALENMGAQMVKEVSTKTNDVAGDGTTTATILAQSIINEGLKNVTAGANPMSLKRGIDKAVTAAVESIRKRAVKIENKKDIANVASISANNDNTIGTLIADAMDKVGKDGVITVEEAKSIETTLDVVEGMQFDRGYISPYMVTDAESMVATLNDPFILIYDKKISSMKDLIHILEKVAQAGKPLVIISEEVEGEALATIVVNTLRKTISCVAVKAPGFGDRRKAMLEDIAILTGGQVISEDLGMKLENTTLQMLGRANKVTVDKENTTIIEGKGQTKEIQGRIGQIKKQIEDTTSEYDKEKLQERLAKLAGGVAVIHVGAATEVEMKEKKARVEDALSATRAAVEEGIVPGGGLTLLKAQEAVAALKLEGDEATGAKIIFRSLEEPIRMITNNAGLEGSVIVEHAKAKKGNEGFNALSMVWEDLVAAGVVDPAKVVRSALQNAASIGSMILTTEVTITDKPEKDAPNPMAGMGGGGMGGMGGMM
>CP024871.1|AZQ02532.1|2463914_2466608_+|hypothetical-protein
MLESKRKSIIPLISKGMRILKLRMDRIVALICSQSASSAGGMSRSRKPFQKQNRSSRYEKVYSIFFIWITVLLIGCSGENSNPTIGTISMGSIKDSFLNLIHSHSSNQSLIPSSGLYVFVSSYTNNASVPPLSHNGNFGGIAGADAYCNSHIPTSLTGTGSYKAMLVDGTNRVATTVGATSSAGQKDWVFEKNTSYYKADGNLVFTTNDAGLFDFSNGSLTYSFTDVFSIYDFGIWTGLQSNWKTATSTQLCSSASQPWTSGNSSIRGSIGYANHKNASSISAGSIPCQWTSTEDPEDPQATVEMGVLCVQEKPITLKAKIGFLEDEQCHHSNSFFTIPWKQCHEFKRHFDPVSGAAISSDVPSPGSYRPVPGQVHLNFFNSSQTNPVGCYISNLQSDLDGNVSGQVNNCLKSNPAPDKVRITLVLDYKTNLAYNNSIGTIRSLWEKTAISALNYLPYDQSKFFQTFFVDPNTHKDQVEPYFEVVLPLNPYWNATIRTFDLGIVNILNFIPANMTNSLRATLSNWQGLVELHNRLKNESVDKIQFDMFQNDPTRNCIRCYTANFISTYGSGGSAGNLYFSAPNGDNLPTIYPVDSSLGHEFGHTVTFTVAPWLLQGVIRNWAGQYIDQNQIYYGQIHNSNQYQDMGTAFGEGIVDSIGRYLISGNQGAWKLGPGIPFYIGTYKDGWKLNPIVDQKYSDFQRFRREMSVRGILENSPDWMSRLQAIQSLNSNFTDRKTNSNNEARYDGFVHYLLQTPPFHIDSYHATNPEIASQLNQVQYRYDQMKLLGEILDGGPANFKWVSYGDVVHPKNSRVSLKDLLVTLGEMHDGSPLPQNGSPGFTDAYLSIKSPFSPQSLGWRLVQKGLISKDEVNNLYRAVGMDQLANICGYPWALVDCQ

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Crispr_ID: CP024871_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP024871_4

2768685-2769389

Orphan

I-E,II-B

Consensus_repeat	Method
CGGTTCAACCCCACGCATGTGGGGAAAAG	PILER-CR
CTTTTCCCCACATGCGTGGGGTTGAACCG	CRISPRCasFinder
CTTTTCCCCACATGCGTGGGGTTGAACCG	CRT
GGTTCAACCCCACGCATGTGGGGAAAAG	PILER-CR

11 spacers

csa3

The CRISPR arrays of CP024871_4

>merge|CP024871|4|2768685-2769389|PILER-CR,CRISPRCasFinder,CRT,PILER-CR
CTTTTCCCCACATGCGTGGGGTTGAACCGTCGGGTCGCGACCCCGTAGGAGCGACACGTCCCGCGACCTTTTCCCCACATGCGTGGGGTTGAACCGAAACACATTTGCTTTTTGTGAATCATTAATAACTTTTCCCCACATGCGTGGGGTTGAACCGTAAAAAGTTCAATAGAAGTTCAAGCTCCTAACTTTTCCCCACATGCGTGGGGTTGAACCGGGAGATTTAACGTCTCCTATTCCGAACCAACCCTTTTCCCCACATGCGTGGGGTTGAACCGGGGATAACGCGTTTGCCTAATACGTAATTTGACTTTTCCCCACATGCGTGGGGTTGAACCGAATCTCGATCTGTTCCTCACGGTTCGGTGTGTCTTTTCCCCACATGCGTGGGGTTGAACCGGGAGAGAACGCGTTTGAAAAAATCAAACGGTCCTTTTCCCCACATGCGTGGGGTTGAACCCTTGACAGTGACCGCACCCTTTTTAGTGAGCCGCTTTTCCCCACATGCGTGGGGTTGAACCGTTTTAGTGTCGAACGTCGGGCCACTCGGCCCACTTTTCCCCACATGCGTGGGGTTGAACCGGAGAGAGAAATCCGCAGGCTCTCGAAAATCTACTTTTCCCCACATGCGTGGGGTTGAACCGACGGAGAAGTTCGATTCCCGGACGGAAGAGCGCTTTTCCCCACATGCGTGGGGTTGAAATT

>CP024871|4|3|2768685-2769023|PILER-CR
CTTTTCCCCACATGCGTGGGGTTGAACCG	TCGGGTCGCGACCCCGTAGGAGCGACACGTCCCGCGAC
CTTTTCCCCACATGCGTGGGGTTGAACCG	AAACACATTTGCTTTTTGTGAATCATTAATAA
CTTTTCCCCACATGCGTGGGGTTGAACCG	TAAAAAGTTCAATAGAAGTTCAAGCTCCTAA
CTTTTCCCCACATGCGTGGGGTTGAACCG	GGAGATTTAACGTCTCCTATTCCGAACCAACC
CTTTTCCCCACATGCGTGGGGTTGAACCG	GGGATAACGCGTTTGCCTAATACGTAATTTGA
CTTTTCCCCACATGCGTGGGGTTGAACCGAATCTCGATCTGTTCCTCACGGTTCGGTGTGTCTTTTCCCCACATGCGTGGGGTTGAACCGGGAGAGAACGCGTTTGAAAAAATCAAACGGTCCTTTTCCCCACATGCGTGGGGTTGAACC	CTTGACAGTGACCGCACCCTTTTTAGTGAGCCG
CTTTTCCCCACATGCGTGGGGTTGAACC	GTTTTAGTGTCGAACGTCGGGCCACTCGGCCCA
CTTTTCCCCACATGCGTGGGGTTGAACC	GGAGAGAGAAATCCGCAGGCTCTCGAAAATCTA
CTTTTCCCCACATGCGTGGGGTTGAACC	GACGGAGAAGTTCGATTCCCGGACGGAAGAGCG


>CP024871|4|4|2768685-2769389|CRISPRCasFinder
CTTTTCCCCACATGCGTGGGGTTGAACCG	TCGGGTCGCGACCCCGTAGGAGCGACACGTCCCGCGAC
CTTTTCCCCACATGCGTGGGGTTGAACCG	AAACACATTTGCTTTTTGTGAATCATTAATAA
CTTTTCCCCACATGCGTGGGGTTGAACCG	TAAAAAGTTCAATAGAAGTTCAAGCTCCTAA
CTTTTCCCCACATGCGTGGGGTTGAACCG	GGAGATTTAACGTCTCCTATTCCGAACCAACC
CTTTTCCCCACATGCGTGGGGTTGAACCG	GGGATAACGCGTTTGCCTAATACGTAATTTGA
CTTTTCCCCACATGCGTGGGGTTGAACCG	AATCTCGATCTGTTCCTCACGGTTCGGTGTGT
CTTTTCCCCACATGCGTGGGGTTGAACCG	GGAGAGAACGCGTTTGAAAAAATCAAACGGTC
CTTTTCCCCACATGCGTGGGGTTGAACCC	TTGACAGTGACCGCACCCTTTTTAGTGAGCCG
CTTTTCCCCACATGCGTGGGGTTGAACCG	TTTTAGTGTCGAACGTCGGGCCACTCGGCCCA
CTTTTCCCCACATGCGTGGGGTTGAACCG	GAGAGAGAAATCCGCAGGCTCTCGAAAATCTA
CTTTTCCCCACATGCGTGGGGTTGAACCG	ACGGAGAAGTTCGATTCCCGGACGGAAGAGCG
CTTTTCCCCACATGCGTGGGGTTGAAATT

>CP024871|4|3|2768685-2769389|CRT
CTTTTCCCCACATGCGTGGGGTTGAACCG	TCGGGTCGCGACCCCGTAGGAGCGACACGTCCCGCGAC
CTTTTCCCCACATGCGTGGGGTTGAACCG	AAACACATTTGCTTTTTGTGAATCATTAATAA
CTTTTCCCCACATGCGTGGGGTTGAACCG	TAAAAAGTTCAATAGAAGTTCAAGCTCCTAA
CTTTTCCCCACATGCGTGGGGTTGAACCG	GGAGATTTAACGTCTCCTATTCCGAACCAACC
CTTTTCCCCACATGCGTGGGGTTGAACCG	GGGATAACGCGTTTGCCTAATACGTAATTTGA
CTTTTCCCCACATGCGTGGGGTTGAACCG	AATCTCGATCTGTTCCTCACGGTTCGGTGTGT
CTTTTCCCCACATGCGTGGGGTTGAACCG	GGAGAGAACGCGTTTGAAAAAATCAAACGGTC
CTTTTCCCCACATGCGTGGGGTTGAACCC	TTGACAGTGACCGCACCCTTTTTAGTGAGCCG
CTTTTCCCCACATGCGTGGGGTTGAACCG	TTTTAGTGTCGAACGTCGGGCCACTCGGCCCA
CTTTTCCCCACATGCGTGGGGTTGAACCG	GAGAGAGAAATCCGCAGGCTCTCGAAAATCTA
CTTTTCCCCACATGCGTGGGGTTGAACCG	ACGGAGAAGTTCGATTCCCGGACGGAAGAGCG
CTTTTCCCCACATGCGTGGGGTTGAAATT

>CP024871|4|4|2769117-2769388|PILER-CR
	TCGGGTCGCGACCCCGTAGGAGCGACACGTCCCGCGAC
CTTTTCCCCACATGCGTGGGGTTGAACCG	AAACACATTTGCTTTTTGTGAATCATTAATAA
CTTTTCCCCACATGCGTGGGGTTGAACCG	TAAAAAGTTCAATAGAAGTTCAAGCTCCTAA
CTTTTCCCCACATGCGTGGGGTTGAACCG	GGAGATTTAACGTCTCCTATTCCGAACCAACC
CTTTTCCCCACATGCGTGGGGTTGAACCG	GGGATAACGCGTTTGCCTAATACGTAATTTGA
CTTTTCCCCACATGCGTGGGGTTGAACCGAATCTCGATCTGTTCCTCACGGTTCGGTGTGTCTTTTCCCCACATGCGTGGGGTTGAACCGGGAGAGAACGCGTTTGAAAAAATCAAACGGTCCTTTTCCCCACATGCGTGGGGTTGAACC	CTTGACAGTGACCGCACCCTTTTTAGTGAGCCG
CTTTTCCCCACATGCGTGGGGTTGAACC	GTTTTAGTGTCGAACGTCGGGCCACTCGGCCCA
CTTTTCCCCACATGCGTGGGGTTGAACC	GGAGAGAGAAATCCGCAGGCTCTCGAAAATCTA
CTTTTCCCCACATGCGTGGGGTTGAACC	GACGGAGAAGTTCGATTCCCGGACGGAAGAGCG
CTTTTCCCCACATGCGTGGGGTTGAAAT

Protein	Signature genes	Signature genes Name	Protein_function
CP024871.1\|AZQ02781.1\|2762042_2762900_-\|pirin-family-protein	unknown	unknown	gnl\|CDD\|224655
CP024871.1\|AZQ02786.1\|2767265_2768030_+\|sphingomyelinase-C	unknown	unknown	unknown
CP024871.1\|AZQ02785.1\|2765244_2765427_+\|hypothetical-protein	unknown	unknown	unknown
CP024871.1\|AZQ02794.1\|2779902_2780778_-\|nicotinate-nucleotide-diphosphorylase-(carboxylating)	unknown	unknown	gnl\|CDD\|238806
CP024871.1\|AZQ03830.1\|2765620_2766385_+\|sphingomyelinase-C	unknown	unknown	unknown
CP024871.1\|AZQ02783.1\|2763314_2764541_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340946
CP024871.1\|AZQ02787.1\|2769651_2770146_-\|ATPase	unknown	unknown	gnl\|CDD\|176910
CP024871.1\|AZQ02789.1\|2770722_2771529_-\|sterol-desaturase	unknown	unknown	gnl\|CDD\|377224
CP024871.1\|AZQ03829.1\|2757695_2759516_-\|translational-GTPase-TypA	unknown	unknown	gnl\|CDD\|224138
CP024871.1\|AZQ03831.1\|2776056_2777859_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|173862
CP024871.1\|AZQ02790.1\|2771830_2772610_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|187576
CP024871.1\|AZQ02780.1\|2761312_2761525_-\|hypothetical-protein	unknown	unknown	unknown
CP024871.1\|AZQ03832.1\|2782078_2783734_-\|lipoprotein-LipL71	unknown	unknown	gnl\|CDD\|380171
CP024871.1\|AZQ02779.1\|2760001_2760898_+\|hypothetical-protein	unknown	unknown	unknown
CP024871.1\|AZQ02792.1\|2774978_2776046_-\|hypothetical-protein	unknown	unknown	unknown
CP024871.1\|AZQ02791.1\|2772610_2773912_-\|adenylosuccinate-lyase	unknown	unknown	gnl\|CDD\|176464
CP024871.1\|AZQ02793.1\|2777872_2779897_-\|bifunctional-(p)ppGpp-synthetase/guanosine-3',5'-bis(diphosphate)-3'-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|223394
CP024871.1\|AZQ02784.1\|2764943_2765117_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|315923
CP024871.1\|AZQ02788.1\|2770197_2770536_+\|transcriptional-regulator	csa3	COG0640_csa3_CAS-I-A	gnl\|CDD\|223713
CP024871.1\|AZQ02782.1\|2763021_2763213_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP024871.1\|AZQ02781.1\|2762042_2762900_-\|pirin-family-protein	gnl\|CDD\|224655	COG1741, COG1741, Pirin-related protein [General function prediction only].	6.25008e-69
CP024871.1\|AZQ02794.1\|2779902_2780778_-\|nicotinate-nucleotide-diphosphorylase-(carboxylating)	gnl\|CDD\|238806	cd01572, QPRTase, Quinolinate phosphoribosyl transferase (QAPRTase or QPRTase), also called nicotinate-nucleotide pyrophosphorylase, is involved in the de novo synthesis of NAD in both prokaryotes and eukaryotes. It catalyses the reaction of quinolinic acid (QA) with 5-phosphoribosyl-1-pyrophosphate (PRPP) in the presence of Mg2+ to produce nicotinic acid mononucleotide (NAMN), pyrophosphate and carbon dioxide. QPRTase functions as a homodimer with two active sites, each formed by the C-terminal region of one subunit and the N-terminal region of the other.	3.90087e-117
CP024871.1\|AZQ03829.1\|2757695_2759516_-\|translational-GTPase-TypA	gnl\|CDD\|224138	COG1217, TypA, Predicted membrane GTPase involved in stress response [Signal transduction mechanisms].	0
CP024871.1\|AZQ02787.1\|2769651_2770146_-\|ATPase	gnl\|CDD\|176910	cd08901, SRPBCC_CalC_Aha1-like_8, Putative hydrophobic ligand-binding SRPBCC domain of an uncharacterized subgroup of CalC- and Aha1-like proteins. SRPBCC (START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC) domain of a functionally uncharacterized subgroup of CalC- and Aha1-like proteins. This group shows similarity to the SRPBCC domains of Micromonospora echinospora CalC (a protein which confers resistance to enediynes) and human Aha1 (one of several co-chaperones which regulate the dimeric chaperone Hsp90), and belongs to the SRPBCC domain superfamily of proteins that bind hydrophobic ligands. SRPBCC domains have a deep hydrophobic ligand-binding pocket and they bind diverse ligands.	6.04112e-49
CP024871.1\|AZQ02789.1\|2770722_2771529_-\|sterol-desaturase	gnl\|CDD\|377224	pfam04116, FA_hydroxylase, Fatty acid hydroxylase superfamily. This superfamily includes fatty acid and carotene hydroxylases and sterol desaturases. Beta-carotene hydroxylase is involved in zeaxanthin synthesis by hydroxylating beta-carotene, but the enzyme may be involved in other pathways. This family includes C-5 sterol desaturase and C-4 sterol methyl oxidase. Members of this family are involved in cholesterol biosynthesis and biosynthesis a plant cuticular wax. These enzymes contain two copies of a HXHH motif. Members of this family are integral membrane proteins.	2.98221e-29
CP024871.1\|AZQ02783.1\|2763314_2764541_-\|MFS-transporter	gnl\|CDD\|340946	cd17388, MFS_TetA, Tetracycline resistance protein TetA and related proteins of the Major Facilitator Superfamily of transporters. This subfamily is composed of tetracycline resistance proteins similar to Escherichia coli TetA(A), TetA(B), and TetA(E), which are metal-tetracycline/H(+) antiporters that confer resistance to tetracycline by an active tetracycline efflux, which is an energy-dependent process that decreases the accumulation of the antibiotic in cells. TetA-like tetracycline resistance proteins belongs to the Eukaryotic Solute carrier 46 (SLC46)/Bacterial Tetracycline resistance (TetA) -like (SLC46/TetA-like) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.00359e-167
CP024871.1\|AZQ03831.1\|2776056_2777859_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|173862	cd08497, PBP2_NikA_DppA_OppA_like_14, The substrate-binding component of an uncharacterized ABC-type nickel/dipeptide/oligopeptide-like import system contains the type 2 periplasmic binding fold. This CD represents the substrate-binding domain of an uncharacterized ATP-binding cassette (ABC) type nickel/dipeptide/oligopeptide-like transporter. The oligopeptide-binding protein OppA and the dipeptide-binding protein DppA show significant sequence similarity to NikA, the initial nickel receptor. The DppA binds dipeptides and some tripeptides and is involved in chemotaxis toward dipeptides, whereas the OppA binds peptides of a wide range of lengths (2-35 amino acid residues) and plays a role in recycling of cell wall peptides, which precludes any involvement in chemotaxis. Most of other periplasmic binding proteins are comprised of only two globular subdomains corresponding to domains I and III of the dipeptide/oligopeptide binding proteins. The structural topology of these domains is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the ligand-binding domains from ionotropic glutamate receptors, LysR-type transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	1.92284e-175
CP024871.1\|AZQ02790.1\|2771830_2772610_-\|hypothetical-protein	gnl\|CDD\|187576	cd05266, SDR_a4, atypical (a) SDRs, subgroup 4. Atypical SDRs in this subgroup are poorly defined, one member is identified as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is related to, but is different from, the archetypical SDRs, GXGXXG. This subgroup also lacks most of the characteristic active site residues of the SDRs; however, the upstream Ser is present at the usual place, and some potential catalytic residues are present in place of the usual YXXXK active site motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	3.46231e-14
CP024871.1\|AZQ03832.1\|2782078_2783734_-\|lipoprotein-LipL71	gnl\|CDD\|380171	NF033163, lipo_LipL71, lipoprotein LipL71. Members of this family are lipoprotein LipL71, also known as LruA, as described in Leptospira interrogans but found broadly in the genus Leptospira. Close homologs that are not lipoproteins by sequence are likely defective in their reported coding region.	0
CP024871.1\|AZQ02791.1\|2772610_2773912_-\|adenylosuccinate-lyase	gnl\|CDD\|176464	cd01360, Adenylsuccinate_lyase_1, Adenylsuccinate lyase (ASL)_subgroup 1. This subgroup contains bacterial and archeal proteins similar to ASL, a member of the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. ASL catalyzes two steps in the de novo purine biosynthesis: the conversion of 5-aminoimidazole-(N-succinylocarboxamide) ribotide (SAICAR) into 5-aminoimidazole-4-carboxamide ribotide (AICAR) and, the conversion of adenylsuccinate (SAMP) into adenosine monophosphate (AMP).	0
CP024871.1\|AZQ02793.1\|2777872_2779897_-\|bifunctional-(p)ppGpp-synthetase/guanosine-3',5'-bis(diphosphate)-3'-pyrophosphohydrolase	gnl\|CDD\|223394	COG0317, SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases [Signal transduction mechanisms / Transcription].	0
CP024871.1\|AZQ02784.1\|2764943_2765117_-\|hypothetical-protein	gnl\|CDD\|315923	pfam13358, DDE_3, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	9.84344e-07
CP024871.1\|AZQ02788.1\|2770197_2770536_+\|transcriptional-regulator	gnl\|CDD\|223713	COG0640, ArsR, Predicted transcriptional regulators [Transcription].	1.3112e-11

>CP024871.1|AZQ02786.1|2767265_2768030_+|sphingomyelinase-C
MKMMQKIFQKEKAKKQNKSKISKYSGGYCVLLLLFFLNCMPNQQLSENSLLLSLLSLPNDPSIEMEKDRSMRKAKPKARPKRKYDGVTFISYATGKRIQANSKAPNGWLKVDASRDTYFTRFNLYQDGGDPNCIKSGPIRVETSANPKYYWNWWLRGGGGNYAYYPKYNDGSKRLTILVISGGCLKSGGKVAFRDHDILTDTHDYYITNWNGGSWNEYLFLWGEKINPGPREIFTAILSPTPPEATEQRESEVD
>CP024871.1|AZQ03830.1|2765620_2766385_+|sphingomyelinase-C
MKMMQKIFQKEKAKRQNKSKISKYSGGYCVLLLLFFLNCMPNQQLSENSLLLSLLSLPNDQSIEMEKDRSMRKAEPKARPKRKYDGVTFISDATGKRIQANSKAPNGWLKVDASRDTYFTRFNLYQDGGDPNCIESGRIRVETSANPKYYWNWWAGGGGGNYAYYPKYNDGSNRLVILVISGGCLKSGGKVAFGDHDTFGAGYDYYITNWNGGSWNEYLFLWVWTLNPGPREIFTAILSPTPPEAIEQRESEVD
>CP024871.1|AZQ02785.1|2765244_2765427_+|hypothetical-protein
MIQASSSFSTQFVVCLIILSLLFVKAKIHLHTQTDIFKYSYLTLSKDFIKEKEDSRLQTN
>CP024871.1|AZQ02784.1|2764943_2765117_-|hypothetical-protein
MIVWGRINIHRSFVVAGFITSLNDRIVIEFLLAYAPKLNPIENVGCKRKRYLLPNFS
>CP024871.1|AZQ02783.1|2763314_2764541_-|MFS-transporter
MVGFMNPQRSAALGFIFVTVLIDVIGFGVIIPVLPKLIQELTHGSLSDAAWYGGLLMFAYSFVQFITAPFVGGLSDRYGRRPILLASLFGFTLDYLFLAFAPSIFWLFVGRVVSGIMGASFTTGYAYIADISPPEKRAQNFGILGAAFGLGFIIGPVIGGSLGQFGSRAPFLAAAVLTLVNWLFGFFVLPESLTKENRRKFEWKKANPIGSLINLKRYPMIIGLVVAFFLINTAAHAVQGTWNYYTIEKFQWNEAMVGYSLGVVGLVYAITQGGLIRIILPVLGQNRSIYLGLALNALGYALFALATQSWMMFVFLIPYCLGGIAMPPLQGIMSSQVPPREQGELQGALTSLMSVTAIIGPILMTGLFSYFTARETPIYSPEAPLWMGTILTAASLWISVGSLRKHHS
>CP024871.1|AZQ02782.1|2763021_2763213_-|hypothetical-protein
MVLILIWSFFGNEVFSNSERSKNFVFKLRKIDNYIVRKIKEKEFKKGLQKQSKSISKTYEFAI
>CP024871.1|AZQ02781.1|2762042_2762900_-|pirin-family-protein
MKIISAIFKDLGDNFRVRRILPSIEARHVGPFVFVDHMGPVSIQTGKELVVRSHPHIGLATITYLYDGVILHRDSIGSEMPIRPYEVNWMTAGSGIAHSERSQLDSRYSILEGIQTWVALPKEYEEVNAEFFHLDRKDIPVINGEEWELRLAAGEFLGKRSPVKVYSSLFYADLDAKPGAKGKWNIPNDQESALYVARGSLNIRGQTVGVGQIAVFLAGETIEFSSEEGSRAILLGGVPFPEHRHLWWNFVSTSLERIEKAKLEWKEEYFPKVPGETERIPLPEK
>CP024871.1|AZQ02780.1|2761312_2761525_-|hypothetical-protein
MQRNLRELLHSEDRRQRRRGNVALTENILGKLLVPSVGFVVLHSNSRFSSREGALFCLNFHCFKLNPGFT
>CP024871.1|AZQ02779.1|2760001_2760898_+|hypothetical-protein
MKLHFIFYFLILISLIACNESKNKIDSDLLLSLAISKPAPPDRAENYDRDVQIITNLSSFTDSGKVEITCNLNYSSQQDIDYYVEQLKKEITRYPRGYWIKAGVDKIVLCKSMTTADGRIKLAFSDINLLAISVTQPMATMRYGTTTCGGIPNFNSFECYDQLAIHHELTHSVDRKFLTFAINSLLYSDPEWEKLNSPGFQYYGSENFLQIPAGWHPLPGIMLRYGASHFVEDRAVFGALIMGWPATYNLLVQACQTDPFVAAKVRLTVSRWKQFWPFPGAENTEWKIRMAQAERDCD
>CP024871.1|AZQ03829.1|2757695_2759516_-|translational-GTPase-TypA
MEIRNIAIIAHVDHGKTTLLDGILRQTGAVTAKEDGERIMDSNDLEKEKGITIKAKNTAVVYKGTRINVVDTPGHADFGGEVERVLATADSCLLLVDAFDGPMPQTRFVLGKSLQLGHKPILVINKIDRPGARPEAVVDMAFDLFSDLGATDEQLDFPIVYASAKQGWAVYNLSESPGTNLDPLLDTVLKHVPPVQADTEAPLQFQVTSLDYNDYVGRIAVGKIYAGKMALGMNVIQLAAKKSDTATSTDTALFRITKLYNFEGLKRNEVNAAEAGDIVAIAGLPDVFIGDTICEPGKPAPRPAIEVEEPTVSMFFMVNNSPFAGKEGKFVTTRNIRERLDRELETNVAMRLEETEDKDRFKVLGRGELHLSVLIETMRREGFEIQVSRPEVILKTNEQGQKLEPYEYLVMDVPDQFTGQIIAELNRRKGELQLMDAHPSGMTRVEFVIPTRGIIGFRGFFISETRGEGVMSSRFLRFDLYKGEIPGRKNGALISMDSGESTAYALWKIQERGELVIGPNTAVYPGMIIGIHSRENDLEVNPVKEKKLSNVRSSGADEAIRLVPPRRFSLEQNIEFLDDDELLEVTPASLRLRKKFLDAVMRKRNK
>CP024871.1|AZQ02787.1|2769651_2770146_-|ATPase
MDLRFTVQAKIQKPLEAVFQAVYDPKHLSGYFTTGGASGPLVAGSKVVWKFADFPSMEREDEGVIVNVVEVVPNSKIVLEWDAHEGSYEGENELLTVGGYKTKTEMIFESLDQNNTLMKITESGWKVSQSALDGSYMNCQGWMNMSCCLKAYLEYGINLRKGFF
>CP024871.1|AZQ02788.1|2770197_2770536_+|transcriptional-regulator
MSKLDKQDLIFKALADSKRREILDLLRKKPKTTGEICSYFEPLNRCTTIQHLKILENAGLLIIKRKGRVRWNYLDNVPIQEIYDRWISKYAKPTLERLTVFKKQMKSKNQPK
>CP024871.1|AZQ02789.1|2770722_2771529_-|sterol-desaturase
MGELLSKFGYSGFFGIIWGFFLIRYLVFSGIAFLVVWVFCGKKLSHKLIQNKKPEKEKIFYEIKYSMLTFFIFGLSGIFVVWAKVNGFNRIYDNVGDYGIVYLIFSAFALILLHDTYFYWTHRMMHHKFFFKYFHLVHHKSTNPSPWAAFSFHPLEAIVESGIVPLVSFVLPLHPGVMIIFFVYMTSLNVLGHLSYEFFPSWFLKSGFTNWHNTTTHHNMHHKYFNCNYSLYFNFWDRIMGTNHEKYKEKFEEVSSRIPEKAKLILEK
>CP024871.1|AZQ02790.1|2771830_2772610_-|hypothetical-protein
MRVGIFGLGYTGIRIAKRLRLQAEIQLKTFSAKTRVEGTEIFDFSNSSSLEEFGKKFSRENFDLCVVTFPVQKLSDPISFINLLFSIGKKFILLGTTSIYKRVPDIVESTPLIEDHDRFAVENEWIGRGGNILRLCGIYGPFRNPGDWARKGLVKKCSRQLNLIHGDDVALTISLLVRKIQTAGWDALPNVLNLSDNQWHTWKEIFSFLEEHEKISKTQIEESPKEDGFIDSELIRSLLPDLQTKNFWMELESLEGIGN
>CP024871.1|AZQ02791.1|2772610_2773912_-|adenylosuccinate-lyase
MIDRYSNPEISKIWELENKFEIWKEIEILACEIRMKRGEIPPEDFQEIKTMAKFNVDEILEIESRVHHDVIAFLTNMNSYIGPAGRHVHYGLTSSDIGDTALCVQMVQAMDLILKKTDALISVVKEKAIQYRDLPCIGRSHGIHAEPMTLGLKFALFFEELNRNRKRMSEARDDIAVGKLSGAVGTYSNIDPEIEAYVCEKMGLKIDPISTQVVSRDRHAFYLSVLGVTASSLDRMATEIRLLQKTEGREVEEPFSAGQKGSSAMPHKRNPVICERISGLSRVIRANVNVGLQDVALWHERDISHSSAERVVLPDSTIALEYILDKMLFVVKNLHVYPDAIKRTLGVTRGLIFSQKVLLALIEKGKIVREEAYLIVQEHAMAVWANQSETLKTRLEKDERVGRVLTQKDLEDIFKIEPYLEKVGLIYKRLGLE
>CP024871.1|AZQ02792.1|2774978_2776046_-|hypothetical-protein
MNKRNRFGELGSVILDFLSSPKIPNFIEFLEKGLDKELFYDPEKTKPEIPIEDLPVDYRLRESGFVRKTYERLFPVSHVFRITHRYEREYLDNFMPLSTGKYIGRGSYKFVYALPWNQVVKVGKSKLPSDPIFGSLYKHVQKNLNRYLKLEEIQLMEFLESKVWTRSSKENIRFKFARLGLERFHYWKLKSLIPDLVLPTRYFMGLRARTTPFGIPIFTLTPCDNQNLLPGKHLKEFIRLNEKIRQNPLQDAFFPKWKLNFDTHKFGVVSRSKLKKIALDFHRVIEVTKHLAEEEKLIFDIHSENIIITFPDFSLKIFDYHVFDEHLYEPSKENPSPEIDHINTIREFVRSFELG
>CP024871.1|AZQ03831.1|2776056_2777859_-|ABC-transporter-substrate-binding-protein
MKIYSIFCMFFVLSVFTFLACGDKEEFETSAVVETLPWNGNPNSIPVALRGQNPIVSPHAKKGGTFRIYSHQFPKSLNYYLDQFSTTAHIFSLMFEPLLDYHPITLEPIPHLASSWKVSPDKKKFTFTIDANAFWSDGKPVTANDVLFTYETLMNKNNNTAVFRIDLSRFEKPVVLNEREIEFTQKEIHWSNFNTIANSLYILPAHYYKDRNFDKENFDFPVVSGPYSMLSAKKGRYIKMRRRGDYWMRAYPFYKGLDNFDTILFKVYNEESIAFQAFKKGDIDIYPTYTASFWVKDAIGEKFDENYILKQKIYNSKPIGFQGLVFNMRREIFSDVNVRKAFAHLVDRKLLVEKLAYNEYEETNAYYQDLWPANSFPNPPLEFDVKKARELLTKAGWKINSKGILEKDGKEFRFSILERDKKSEKYLTLIQERAKEVGIIINLESTDLAEWSSRMDKYDFDMTWAAWGGGVFKDPEAMWYSKYAEEKGQPNLSGFKNVAVDKLIDQQRTEFDVSKRNEILKKIDKILTAEVPYVLLWNTSSTRIMYWNRFKAPKNPLGKFGSEREASSLWWFDEEQSSKLNDAILKKEKLSPAPGKVYFQ
>CP024871.1|AZQ02793.1|2777872_2779897_-|bifunctional-(p)ppGpp-synthetase/guanosine-3',5'-bis(diphosphate)-3'-pyrophosphohydrolase
MGFVKTPVTKDMLLEGIRETLGESAYESVQKAYDVSERAHQGQFRLSGEPYIIHPLQVGFILYELGLDEKVICAGLLHDVIEDTQYSRDDMIRDFGEDITDLVEGVTKISKIKSQSKETEAAENIRKIIVATIKDIRVILIKLADKTHNMRTLSFQLPEKQRRIAQETLSLYAPIAGRLGIYKIKSELEDLAFQVLNPEEYQEVKKNINSKKSEREGFIETLKIILLQRLSEIQIEADVDGRAKHFYSIYRKMKLKEKTFNEIFDLRAIRIITNEVKDCYGVLGIVHTLWNPVPGRFKDYIATPKTNMYQSLHTTVIGPDGKPLEVQIRTRDMNDIAEYGIAAHWMYKEGKPSVSEKNVKVRWLELLSSWQDSALDPKEFVEELKYDLHEDEVFVFTPKGEILQLPKGATILDFAFRIHTDVGLKAKGGRINGRMLPLRTELRSGDQIEIITDKRTKPSPIWLRIVRTPSARQKLRSYFRKLKEENKKDLQQEAEFAAEITLNVEVLEELKKKPSSKPAKQIDLGAGKVIVAGLRGIPVRLSGCCSPLPGDGIIGFVTRGRGVSIHKKGCATAKQQEQEESMRIITVEWDYGQSESIPVLIEVKSKDRQGIFMEIVKSISNTQTNIRESKASTDQRGNLVANFEVDVEHLDQLKEILSNLKQIPDVYQAHRIKN
>CP024871.1|AZQ02794.1|2779902_2780778_-|nicotinate-nucleotide-diphosphorylase-(carboxylating)
MKRAYTHPVSSVSYQDYETLVKLAWEEDCPEEDITSVSLFTPDQKATASLNARESGILCGTGVLEVLNVFSENRIRSELLKQDAESFQKGDTLLRIQGNLIQILRIERILLNFLQYLSGISTQTGEVVQKYGQKDLMILDTRKTLPGYRKLAKYAVYCGGGSNHRLNLSEMAMVKDNHLAMYSSPREPVEKIKARFPGKIVEVEVDSLLQLEEAIGSGAEVILLDNFSLEDTKTAYSILKQKAPNVQIEFSGGITPEKLEALSEFSGAGVSMGYLTHTTRFLDLGLDIEQH
>CP024871.1|AZQ03832.1|2782078_2783734_-|lipoprotein-LipL71
MKSTQRKILSSFIILLAGFFISCGAELPIQELSDAKNSITRAKSAGAEKYAPAELEEARKNLLTAHQKASEENLAETKKSALYARAKALDASEKSFPFSVDDVRKESNVAIESAEEAYASQLASEPYNTSVQLRKEGDALRETADRTLESYPKESGDDGKLRMRLAAFDQYEASRQKYTDSKKAADESKVLALSQKQQLIDSLADIEKNLNDADKYAEGKDPEVSETRNRLESAKAKIEEGKIRDGYAEIDDIRKKSGELVAKNIKVYAEKQKELAKQSVASATTKLASFDRNKINASRDFQVSYQRAEENLKAAEESRVSAEDLYTSEKYEDSISRSEEAIRLSRIVVDQVIELAERIERKAASDNVAGRDTKTGTDGQKDPKNQSTTTDGKNSSTKMGKDGLPEGWKRYVVRKKVPADCLWRIAKDKRHYGTAKLWRRIYEANRNKIRNPNLIYPKQVLLIPPKKGPTQLNKVQDSRKKKPATEDVEAIEADQKPASPAEESESGDMDNKKKAETMTPPATEEEESAENDEITPEEENGGEEENPENLQ

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Crispr_ID: CP024871_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP024871_5

3059292-3059384

Orphan

Consensus_repeat	Method
TTCAAAAAAGTACTTGGATAATCAACCT	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP024871_5

>merge|CP024871|5|3059292-3059384|CRISPRCasFinder
TTCAAAAAAGTACTTGGATAATCAACCTGCGAAACGACCCGTAGGGAGTTGAGCATGAGTTTTTATTCAAAAAAGTACTTGGATAATCAACCT

>CP024871|5|5|3059292-3059384|CRISPRCasFinder
TTCAAAAAAGTACTTGGATAATCAACCT	GCGAAACGACCCGTAGGGAGTTGAGCATGAGTTTTTA
TTCAAAAAAGTACTTGGATAATCAACCT

Protein	Signature genes	Signature genes Name	Protein_function
CP024871.1\|AZQ03000.1\|3055829_3057014_-\|isovaleryl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|185640
CP024871.1\|AZQ03856.1\|3069452_3070355_-\|bile-acid:sodium-symporter-family-protein	unknown	unknown	gnl\|CDD\|223462
CP024871.1\|AZQ03008.1\|3068344_3069448_+\|rhodanese-domain-containing-protein	unknown	unknown	gnl\|CDD\|234663
CP024871.1\|AZQ03855.1\|3057093_3057495_+\|hypothetical-protein	unknown	unknown	unknown
CP024871.1\|AZQ02997.1\|3047861_3048077_-\|hypothetical-protein	unknown	unknown	unknown
CP024871.1\|AZQ03010.1\|3072749_3073184_-\|SUF-system-NifU-family-Fe-S-cluster-assembly-protein	unknown	unknown	gnl\|CDD\|273918
CP024871.1\|AZQ03003.1\|3059403_3059997_+\|outer-membrane-lipoprotein-carrier-protein-LolA	unknown	unknown	gnl\|CDD\|225390
CP024871.1\|AZQ03857.1\|3071970_3072294_-\|DUF59-domain-containing-protein	unknown	unknown	gnl\|CDD\|225062
CP024871.1\|AZQ03001.1\|3057578_3058340_+\|electron-transfer-flavoprotein-subunit-beta	unknown	unknown	gnl\|CDD\|238847
CP024871.1\|AZQ03009.1\|3070359_3071508_-\|taurine-dioxygenase	unknown	unknown	gnl\|CDD\|165707
CP024871.1\|AZQ02998.1\|3050375_3051461_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|284923
CP024871.1\|AZQ03004.1\|3060003_3061821_+\|hypothetical-protein	unknown	unknown	unknown
CP024871.1\|AZQ03005.1\|3061817_3062786_+\|tryptophan--tRNA-ligase	unknown	unknown	gnl\|CDD\|234866
CP024871.1\|AZQ02996.1\|3046321_3047797_-\|ATP-dependent-DNA-ligase	unknown	unknown	gnl\|CDD\|185704
CP024871.1\|AZQ02994.1\|3042931_3044161_-\|IS256-family-transposase	unknown	unknown	gnl\|CDD\|307151
CP024871.1\|AZQ02999.1\|3055137_3055833_-\|SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|226607
CP024871.1\|AZQ03854.1\|3052876_3053947_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|284923
CP024871.1\|AZQ03007.1\|3065459_3066956_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|223562
CP024871.1\|AZQ03006.1\|3063900_3065049_+\|hypothetical-protein	unknown	unknown	unknown
CP024871.1\|AZQ02995.1\|3044414_3045842_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|271325

Protein	Function_ID	Function_description	E-value
CP024871.1\|AZQ03000.1\|3055829_3057014_-\|isovaleryl-CoA-dehydrogenase	gnl\|CDD\|185640	PTZ00461, PTZ00461, isovaleryl-CoA dehydrogenase; Provisional.	5.40632e-171
CP024871.1\|AZQ03856.1\|3069452_3070355_-\|bile-acid:sodium-symporter-family-protein	gnl\|CDD\|223462	COG0385, COG0385, Predicted Na+-dependent transporter [General function prediction only].	1.06843e-51
CP024871.1\|AZQ03008.1\|3068344_3069448_+\|rhodanese-domain-containing-protein	gnl\|CDD\|234663	PRK00142, PRK00142, rhodanese-related sulfurtransferase.	5.74207e-153
CP024871.1\|AZQ02994.1\|3042931_3044161_-\|IS256-family-transposase	gnl\|CDD\|307151	pfam00872, Transposase_mut, Transposase, Mutator family.	1.03665e-134
CP024871.1\|AZQ03010.1\|3072749_3073184_-\|SUF-system-NifU-family-Fe-S-cluster-assembly-protein	gnl\|CDD\|273918	TIGR01994, Iron-sulfur_cluster_assembly_scaffold_protein_IscU, SUF system FeS assembly protein, NifU family. Three iron-sulfur cluster assembly systems are known so far. ISC is broadly distributed while NIF tends to be associated with nitrogenase in nitrogen-fixing bacteria. The most recently described is SUF, believed to be important to maintain the function during aerobic stress of enzymes with labile Fe-S clusters. It is fairly widely distributed. This family represents one of two different proteins proposed to act as a scaffold on which the Fe-S cluster is built and from which it is transferred. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	8.11824e-70
CP024871.1\|AZQ03003.1\|3059403_3059997_+\|outer-membrane-lipoprotein-carrier-protein-LolA	gnl\|CDD\|225390	COG2834, LolA, Outer membrane lipoprotein-sorting protein [Cell envelope biogenesis, outer membrane].	9.12239e-12
CP024871.1\|AZQ03857.1\|3071970_3072294_-\|DUF59-domain-containing-protein	gnl\|CDD\|225062	COG2151, PaaD, Predicted metal-sulfur cluster biosynthetic enzyme [General function prediction only].	8.85668e-26
CP024871.1\|AZQ03001.1\|3057578_3058340_+\|electron-transfer-flavoprotein-subunit-beta	gnl\|CDD\|238847	cd01714, ETF_beta, The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.	1.36379e-89
CP024871.1\|AZQ03005.1\|3061817_3062786_+\|tryptophan--tRNA-ligase	gnl\|CDD\|234866	PRK00927, PRK00927, tryptophanyl-tRNA synthetase; Reviewed.	2.56696e-151
CP024871.1\|AZQ03009.1\|3070359_3071508_-\|taurine-dioxygenase	gnl\|CDD\|165707	PLN00139, PLN00139, hypothetical protein; Provisional.	3.6525e-31
CP024871.1\|AZQ02998.1\|3050375_3051461_+\|hypothetical-protein	gnl\|CDD\|284923	pfam07602, DUF1565, Protein of unknown function (DUF1565). These proteins share a region of homology in their N termini, and are found in several phylogenetically diverse bacteria and in the archaeon Methanosarcina acetivorans. Some of these proteins also contain characterized domains such as pfam00395 and pfam03422.	1.29956e-86
CP024871.1\|AZQ02996.1\|3046321_3047797_-\|ATP-dependent-DNA-ligase	gnl\|CDD\|185704	cd06846, Adenylation_DNA_ligase_like, Adenylation domain of proteins similar to ATP-dependent polynucleotide ligases. ATP-dependent polynucleotide ligases catalyze the phosphodiester bond formation of nicked nucleic acid substrates using ATP as a cofactor in a three step reaction mechanism. This family includes ATP-dependent DNA and RNA ligases. DNA ligases play a vital role in the diverse processes of DNA replication, recombination and repair. ATP-dependent DNA ligases have a highly modular architecture, consisting of a unique arrangement of two or more discrete domains, including a DNA-binding domain, an adenylation or nucleotidyltransferase (NTase) domain, and an oligonucleotide/oligosaccharide binding (OB)-fold domain. The adenylation domain binds ATP and contains many active site residues. Together with the C-terminal OB-fold domain, it comprises a catalytic core unit that is common to most members of the ATP-dependent DNA ligase family. The catalytic core contains six conserved sequence motifs (I, III, IIIa, IV, V and VI) that define this family of related nucleotidyltransferases including eukaryotic GRP-dependent mRNA-capping enzymes. The catalytic core contains both the active site as well as many DNA-binding residues. The RNA circularization protein from archaea and bacteria contains the minimal catalytic unit, the adenylation domain, but does not contain an OB-fold domain. This family also includes the m3G-cap binding domain of snurportin, a nuclear import adaptor that binds m3G-capped spliceosomal U small nucleoproteins (snRNPs), but doesn't have enzymatic activity.	1.85204e-39
CP024871.1\|AZQ02999.1\|3055137_3055833_-\|SAM-dependent-methyltransferase	gnl\|CDD\|226607	COG4122, COG4122, Predicted O-methyltransferase [General function prediction only].	5.08977e-69
CP024871.1\|AZQ03854.1\|3052876_3053947_+\|hypothetical-protein	gnl\|CDD\|284923	pfam07602, DUF1565, Protein of unknown function (DUF1565). These proteins share a region of homology in their N termini, and are found in several phylogenetically diverse bacteria and in the archaeon Methanosarcina acetivorans. Some of these proteins also contain characterized domains such as pfam00395 and pfam03422.	1.88842e-84
CP024871.1\|AZQ03007.1\|3065459_3066956_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|223562	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only].	7.73397e-158
CP024871.1\|AZQ02995.1\|3044414_3045842_+\|hypothetical-protein	gnl\|CDD\|271325	cd14955, NHL_like_4, Uncharacterized NHL-repeat domain in bacterial and archaeal proteins. The NHL (NCL-1, HT2A and LIN-41) repeat is found in multiple tandem copies, typically as 6 instances. It is about 40 residues long and resembles the WD repeat and other beta-propeller structures.	1.13802e-12

>CP024871.1|AZQ03001.1|3057578_3058340_+|electron-transfer-flavoprotein-subunit-beta
MKIIVLVKQVPDTETSIKVGDKSINEAGIKWIISPYDEFAIEEGIRLREKHGGEVVAVSLGPDRVVEALRTAYAMGADRAVHIKVDNYVPFDTNNTAELIANFAKTESADVIIGGRQSIDTDSSQVVVQVAELLGIPHIAFAVNLEINGTVVKATKEVEGGTQTVETSTPVALTAQKGLNEPRYPSLKGIMTAKKKPVETKSAADLGSPASKIEVVGLEPPPPRIPGRKLEAADANGFASQLVKALREEAKVI
>CP024871.1|AZQ03855.1|3057093_3057495_+|hypothetical-protein
MIYALILTILCGLFFFLSYRLSQKSNALLQKNSKMQEPIVKNTNSSRNDSFQESKFAILKLSVFRSKFQNALRSPFQKESVFLLLSLCVWMLLPLFWGLAFFLKTDANVLVVIGCMIWTYYWLKYLFSTDEAI
>CP024871.1|AZQ03000.1|3055829_3057014_-|isovaleryl-CoA-dehydrogenase
MRAVLEKPNDLFNPTENHLALRETIAKFAKENMDTQAKEHDDRETFNLALFRRIGSELGLFGITVPEEDGGMGMDAVAAVIIHEEMSAYDPGFMLSYLAHEVLFVNNFYHSSSPAQREKYLSKVISGEWIGGMGMTEPGAGTDVLGMRTIAVKKGDKYVLNGSKQYITNGNIGSVFLVYAKMSKDSKRTTSFIVESSFPGFSVGKKEEKMGMRSSPTTQLIFEDCEVPAENLVGQEDGALIHMMRNLEIERITLAAQSLGIAKRCVDIMADYTIRHREAFGKKLSEFGQIQRLLAESYADYQAARALVYQVASGINPDSRNSLGAASAKLVATQMAERVSRNAIQALGGYGYCREYPVERLHRDSILLSIGGGTNEAMQKNIVADLKKIYEGTP
>CP024871.1|AZQ02999.1|3055137_3055833_-|SAM-dependent-methyltransferase
MSRKNIQLTEKLENYIFQNSVREPDFFQRLREETGKLAQANMQISPEEGQFLRLLVQISGARRIVEIGTFTGYSSLCFAFALPEDGKILCCDISEEWTRIARKYWKESGLEPKIRLKIGSALETLQLLLDSKSAPVWASDFAFGPSSIDLIFLDADKENYPNYYALILQLLKPGGLLIADNVLWDGSVVDSTHQESSTIGIRKFNELVRSDLNVDVSMVPIADGVSLVRKK
>CP024871.1|AZQ03854.1|3052876_3053947_+|hypothetical-protein
MKQIFSIFFTILLLVECAGESNDSSQLLLGIINQQQSLTLDRKSSELVIIDIPTHYVDSISGNDSNAGTKSAPYRTITKAILASKADGTKVIYAAPGTYDTSIGETFPIYIPDGVNLYGDYDGKGLIGGSSSFYAGPPGTTPKTGPTWINGGGFDINNTAWNATIIPKNNSQIAGFKIINPNPMSPGGYFTRGISIQNFVSIRIRNNTITAMPSGAGIYIEYFTVTAIGSNIISGNQITSNYWGIEDGGIRASEDKVENNVISQNFIGISTTDGLDLGQGATGSTGKNTFSCNTYEDVMIVGSANFPQTQYAMNNYWDHFAPTMSSTHIDGLDIRNYNNATLVYYAGGGVAPNACN
>CP024871.1|AZQ02998.1|3050375_3051461_+|hypothetical-protein
MKQIFSIFFTILLLVECAGESNDSSQLLLGIINQQPLTLNHSDRKSSELVIIDIPTHYVDSISGNDSNAGTKSAPYRTITKAILASKADGTKVIYAAPGTYDTSIGETFPIYIPDGVNLYGDYNGKGLIGGSSSFYAGPPGTTPKTGPTWINGGGFDINNTAWNATIIPKNNSQIAGFKITNPNPKSPEGDSTRGISMQNFVSIKIKNNTITGMPSGVGIHFEFTTVTDVGSNTISGNQLTYNYHGIIDHSIRASYDKVENNVISRNYIGIHTTRGLDLGQGPAESAGNNTISCNSYEDIWIPGSSNGNDPQVLFARNNYWDHFPPTISFTGQEPGLDIRHISSATVIRYEGGGVAPNACN
>CP024871.1|AZQ02997.1|3047861_3048077_-|hypothetical-protein
MYLPQKWELIGFEGFCYKQFAQRPVVGSETARRAGQSALVVSLAEKASLRLYKKFHNLYLKGKYLLKTKKR
>CP024871.1|AZQ02996.1|3046321_3047797_-|ATP-dependent-DNA-ligase
MKHYLTYKDDTSDKFWSIEISGNSFTVVYGKIGAVGTSQTKAFETEETCLREARKILSGKLKKGYIEKNDIIKNSVPTDNKRPKLDKENQKEVDKAVTPKIEKQSKSDSQKIEEQPKDKVKQSSQKTTKQDSETLPSESLKELNRISLYYQGDGSDKVYHVNIDPKEDGYVVLFAFGRRGSTLQTGTKTSKPVSYESAQKIMNQLVNSKMSKGYTEGESGTPYLHSSKEERISGVHCQLLNPIEEEELSVYIENDQYGAQEKLDGNRMMIRKTGDNVEGINRKGLIIATSQIICEYALGFQEDFILDGESIGDVFYPFDIFSKDGRDIQHLSYRERYAILKSILKDRDKTFRLVELVVSTKDKKGLLEKLRENQKEGIVFKDLNAPYKAGRPASKGAQIKFKFYETATVSVETVNLKRSVSMRLYDGKSWINVGNVTIPVNFELPQEKDIIEVRYLYAYRGGSLYQPTYLGVRSDADENDCDLNQLKYKNV
>CP024871.1|AZQ02995.1|3044414_3045842_+|hypothetical-protein
MIHLLILFFIFLFQACSPTSDAKTNNLFLIPLAQENNIGSVAVHGNLDSLDVEEVPLRENSVSLEWALLYGKGPNKITRDSKLVVDEKGFVYVAADIDSDPFYNELTNKSIRGGKDLILAKYDSQKNVIWMRSIPGILGTKLNVTGIAVDSKENAYVTGSIIGSLENIPVLENQDMLVIKFDSNGIIKWIKQTGAGDGKYEVSPKKITVDTFGNSYIVGTSNGPLGENGFIVKLDTNGNQIWIDHLSIPGADIIPVGVAFDKVTGNIYMSGYGHNANFATNTTPGIGQNDLFILKYDSKGNRQFFAQLGAPLKSVFGNAITVDRFGNVLVGGYSNADFGLKPDETSYIGTIVKYDSSGVQQWIRQFGQKTTIINEITTDRAGNVFTTGQTNELIKFANMPSEGNQDVFVTKHSSSGEVRQLWQWGTIRETMVGSGIGVDFDGNLYTTGWATRNIFNEIFGNEMMGAIDIFLIKFR
>CP024871.1|AZQ02994.1|3042931_3044161_-|IS256-family-transposase
MSNPKNRAEELLDELIKDKSPEDLLGNEGLLKQLTKSLIERAMQGEMTHHLGYEKNSSLGNNTGNSRNGKSNKKLKGDFETIDLEIPRDRNGSFEPQIIQKGQTRFTGFDDKIISMYSRGMTTREITQHLQEIYQVEVSADLISEVTDSVLETVIEWQNRPLDKVYPILIMDALVVKVRDGHHVQNKSFYLALGINLQGTKEILGIWVERTEGAKFWLQILTDLKNRGVEDILIACVDGLKGFPDTIISVFPNAQVQLCIVHMVRNSLKWVSYKQKKELMIDLKAIYKSPSAEIAKKSLDDFSTKWDSQYPMISKSWRNNWESVIPFLAYPPNIRKAIYTTNAIESMNMGLRKIIKNRGSFPTDEAAIKLLYLALNNMSKKWTMPIQDWGKAMNQFSIIFGDRLKFDSF
>CP024871.1|AZQ03003.1|3059403_3059997_+|outer-membrane-lipoprotein-carrier-protein-LolA
MAFLKIRRILPGAAGLILVCGISISGDPGRDKLNALLGRMGEISSLRASVTINNEISGTLSFKKPNYLHVKFSDGRVVSSNGRFLWFYSPARGIVGKQDLRGTSGGVFGLLGGYEEITQVGGSIRLKSPTKSYEEIVVTMNPDNTPKSLRMKHRGSGEYTSISFSGVQTNVGLSASLFNFSAPSSAQIVENPLNEKE
>CP024871.1|AZQ03004.1|3060003_3061821_+|hypothetical-protein
MSVNSRTDAHKTFADLYRKQRSPEHQEQIDEVIQKSNDIFIRIDLMRKIDEEFEKKRQEENKKSEEDRPKRNSATSTKATPKPARRMESNSSGGAGIGFLANLFGGNPAINKFAKESGTIDVGFLGRKLQVSGGVHNLFKFLKEDQIIATIQALRFCEQQGWRYWKPLIYNVVLNFNKLLNSIISLDSLFIDQISPEIFLNRATKLELYYARHLSREDCKDIIMTEVPELVRKDEKLVPKMPQIMAGLSYGLNLESGRPKMSDAIRAFHIVATKRMITWNEIVQQLNVPPINETKFQGSPDIIKEVETTLLRLADDIQTRLNRKHELQSLRERYFRIDDKGRMNFDFLNLIVDDYFENHVPENMQSASMKSAFKGTPHKLMYLLLRDLQASYAPILEGTVKIGTKNQSKDVIIMHPGLFKSDIEQINNLLRLLDAFNKKYPSFQYSFATYNEHTTSTVGVEDQITQNLLKLLGDAAAFMGKFAEKINIIVENHLLAKQYEASGKLNERVLVSKEKVIEEIKILHRFIPYGDSTIVSGNRLNGKTLEFAFLEMTKLFYNYAVIYKDKSTITKLTLHKKLDAELGSLTKEYERLSGKPYETKRMEEA
>CP024871.1|AZQ03005.1|3061817_3062786_+|tryptophan--tRNA-ligase
MRILTGVQPSGKLHLGNFFSVIRKLKEYQDSTDLFCFIADLHSLTTFSSKEKQKENTFNAVCDFLALGIDPDQCTFWLQSGVPEVTELTWYLSHSITVNQLSLAHSYKDKVAKGFNPGGGLFFYPVLMAADILGFDSDRVPVGKDQKQHLEFARDIASNFNREIGPVFKIPEPEIDETTALVPGTDGQKMSKSYGNTINFFDSEKELKKSIMSITTDSAGIDEVKDPSKSNIYAIHSLFLDEKGRKALKQKFLIPGTGYGDLKKQLLQDTLDYFAPFRKEREKIGEDKSFVEATLKKGQEKARNTITNVLDRTRKELGIYRF
>CP024871.1|AZQ03006.1|3063900_3065049_+|hypothetical-protein
MNHLCTSHFTRLLTSFVVLSMTVLNCKKEKDDSSILLAVAALLAGTSTTNSSNVSYGGTKSPGDVMTGDMVKANYGNFSFTNLTTNEKISGQVATYSASPFIALLSAPSYTQGGFAIPIAGVGLLATPISGYSNAGGAPVTAMRAEVYTEKSSNCSDVSGTFNMVQAMFGNAVGAFQGGYGTLTITGTNQKFIAGTITTLGGAGTAVNLNNGICTDGKVAWATGETAFVSSTGVLILDMGTDKGGFFGLAKDVNLNGSGILNGKTLLGFDNLRGANAATIDSFVSGKFTCLNGACNGVNIDARTLTAQNNGNSSTNVPVFTNGISASTTLGNGGGGIPLAANDNLVLIARTVNGKITVAMVACSTGGCTAASSRHFGLYTEN
>CP024871.1|AZQ03007.1|3065459_3066956_-|ABC-transporter-ATP-binding-protein
MIKISGLNKAFTTKVLFDDLNLSINRGEKIGLVGRNGHGKSTLFQMILGNVEPDSGIISVPKGYKIGHLQQHLHFTKLTVLEECALGLPEGEEYETWQVEKILSGLGFSEQDMERNPNEFSGGYQIRMNLAKLLVSAPDMLMLDEPNNYLDIVTIRWLEEFLREWEGEIILVTHDRGFMDAVVTHTIAIHRTKAIKVQGDTDKLYNQINQSEEIYEKTRLNEAKKRKQEEIFIAKFKAKASFASRTQSRVKKLEKQGEMKALEKIQDLELYFNSAPFAASQMLSAENLCFSYDGKKPYLIENFSIGVGNKERICIIGKNGKGKSTLLKILAGELEPSQGTIKKHPILKEGYFGQTNKLNLNENSTVVEEIMVSDRSCTEWQARTIAGGLMFSEDQALKKIKVLSGGEKSRVLLGKILVTPCHLLYLDEPTNHLDMQSCDSLIEAIDEFEGSVIMVTHDELHLRAVATKLIVFDNDTIRIFDGSYDDFLNEVGWSDEDY
>CP024871.1|AZQ03008.1|3068344_3069448_+|rhodanese-domain-containing-protein
MANRDDLQKKTLAKKRPLHNIYGKEILKKRLETENFPRTTISFYRYVILENVQELRNQLYVEWEALGVLGRIYVAREGINAQLSIPSHNLNSFKENLNSRIQFKDMLFKIAVKDDHKSFLKLDLKVRNKIVADGLNDDAFDVTNVGKHLSAEEFNHYMEDKNSIVIDVRNHYESEIGHFENAILPQSDTFREELQILLELLNGKEDQKILMYCTGGIRCEKASAWLKHHGFKDVNQLHGGIISYAHEISQKGLESKFRGKNFVFDGRLQETIGNEIISTCHQCGKKSDRHVNCANPGCHILFIQCDDCSEKFEGCCTEECRTVLHLPKEKQKEIRKGKSNENRFFTKSKIRPKISELYQNRKPFETV
>CP024871.1|AZQ03856.1|3069452_3070355_-|bile-acid:sodium-symporter-family-protein
MSELDAVRINFNESGLVFLNLLLGLIMYGIALELKLEDFKLLFDNPRASITGILSQFILFPFATYLLLWILNPPSGIALGMLLVAACPGGNISNFITLLAKGNTALSISLTAFSSVLAIFATPFNFFFWGNLYPPVQAALKEITLNPWDVFKAILIILVIPIFLGILTKRYLPKNAVKLTKPLKVLSGFIFIAFLLIALLANYQIFLKVIHRVFLYVFLMNTTGFLLGYYFAKLIRLDERDARCISIETGIQNSGLGLVLIFAFFGGQGSMAIIAAVWGIWHGLAGVSLAWFWSRKKISF
>CP024871.1|AZQ03009.1|3070359_3071508_-|taurine-dioxygenase
MVAKTFSKVKNKTHSKTKTKAASVKKTKSKVAFALSKGFIDFKNPLPLVYQPDSEEQKGKQKLIQWIKSNKHTLVDDLKEYGAILFRGFDVFSPQDFEDVIINVDSNLKNNYLGTSPRNQVTKYTFTATELPPAYPIMQHAEMSFLDSPPKKLFFYCKKAPEKFGETPITDLRKVLNEVPVFIREKFEKEKIRYSRVYDGPSNRSRFQFWKTKRWDEMFQTKDREKVEEISKKQNFKVEWFGKDNLRLINTTLAIRKHPEFKSLAWHNHSQVFHIDAARKEYWRIFAHQKTIRSFLVGITLEILTFIKKITTKKEYLDTHCTYGDGQEISGQELKRIQDAFWNNISLFSWREGDILIIDNYSVSHGRHPFTGPREIFVAWAD
>CP024871.1|AZQ03857.1|3071970_3072294_-|DUF59-domain-containing-protein
MLEAPTNTLEGQIYEEVRKVEDPEIGISVAELGLIYRIKVEGSKAKIDMTYTSMACPAGPQMKQQIKDHALRVEGITDAEVEVVWVPKWDPREMATEEAKMDLGIFD
>CP024871.1|AZQ03010.1|3072749_3073184_-|SUF-system-NifU-family-Fe-S-cluster-assembly-protein
MSLSDSLYKEVILDHYQNPRFRGKLEPADLSEHGINPLCGDELELTINLDGDKIADVRVMGKGCSISQASGSMMAESIRGKTVFEAEHILSRFKNMFLEDKDPKFDEELEDLESMESVKKIPARIKCAVLPWNTLERALSRIEK

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Crispr_ID: CP024871_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP024871_6

3090317-3090832

TypeI-E

I-E,II-B

Consensus_repeat	Method
CGGTTCAACCCCACGCATGTGGGGAATAG	PILER-CR
CTATTCCCCACATGCGTGGGGTTGAACCG	CRISPRCasFinder
CTATTCCCCACATGCGTGGGGTTGAACCG	CRT

8 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of CP024871_6

>merge|CP024871|6|3090317-3090832|PILER-CR,CRISPRCasFinder,CRT
CTATTCCCCACATGCGTGGGGTTGAACCGTAGGAGCGACACGTCCCGCGACTACTGAGCGCCTATTCCCCACATGCGTGGGGTTGAACCGCAAAACACCATGATTGTCGCCCATGAGTTCGTCTATTCCCCACATGCGTGGGGTTGAACCGTTACCGATTCCACGCCCATCAGAACGGAAGGGCTATTCCCCACATGCGTGGGGTTGAACCGGGATTCTCGGTTTACTGGAAAGTTGAAACGGACTATTCCCCACATGCGTGGGGTTGAACCGTGAGGTCGATATAAATCCAAAAGTTATCTTAGCTATTCCCCACATGCGTGGGGTTGAACCGACACCTGAAATAATTTTTCTTGGCTGGAAGACCTATTCCCCACATGCGTGGGGTTGAACCGGCAATACGGGCAGAACTGAAAATTAAATTTCCCTATTCCCCACATGCGTGGGGTTGAACCGATAATAAAATTGATAATAAAGAGAAAGAAAACTATTCCCCACATGCGTGGGGTTTGAGCT

>CP024871|6|5|3090317-3090772|PILER-CR
CTATTCCCCACATGCGTGGGGTTGAACCG	TAGGAGCGACACGTCCCGCGACTACTGAGCGC
CTATTCCCCACATGCGTGGGGTTGAACCG	CAAAACACCATGATTGTCGCCCATGAGTTCGT
CTATTCCCCACATGCGTGGGGTTGAACCG	TTACCGATTCCACGCCCATCAGAACGGAAGGG
CTATTCCCCACATGCGTGGGGTTGAACCG	GGATTCTCGGTTTACTGGAAAGTTGAAACGGA
CTATTCCCCACATGCGTGGGGTTGAACCG	TGAGGTCGATATAAATCCAAAAGTTATCTTAG
CTATTCCCCACATGCGTGGGGTTGAACCG	ACACCTGAAATAATTTTTCTTGGCTGGAAGAC
CTATTCCCCACATGCGTGGGGTTGAACCG	GCAATACGGGCAGAACTGAAAATTAAATTTCC
CTATTCCCCACATGCGTGGGGTTGAACCG

>CP024871|6|6|3090317-3090832|CRISPRCasFinder
CTATTCCCCACATGCGTGGGGTTGAACCG	TAGGAGCGACACGTCCCGCGACTACTGAGCGC
CTATTCCCCACATGCGTGGGGTTGAACCG	CAAAACACCATGATTGTCGCCCATGAGTTCGT
CTATTCCCCACATGCGTGGGGTTGAACCG	TTACCGATTCCACGCCCATCAGAACGGAAGGG
CTATTCCCCACATGCGTGGGGTTGAACCG	GGATTCTCGGTTTACTGGAAAGTTGAAACGGA
CTATTCCCCACATGCGTGGGGTTGAACCG	TGAGGTCGATATAAATCCAAAAGTTATCTTAG
CTATTCCCCACATGCGTGGGGTTGAACCG	ACACCTGAAATAATTTTTCTTGGCTGGAAGAC
CTATTCCCCACATGCGTGGGGTTGAACCG	GCAATACGGGCAGAACTGAAAATTAAATTTCC
CTATTCCCCACATGCGTGGGGTTGAACCG	ATAATAAAATTGATAATAAAGAGAAAGAAAA
CTATTCCCCACATGCGTGGGGTTTGAGCT

>CP024871|6|4|3090317-3090832|CRT
CTATTCCCCACATGCGTGGGGTTGAACCG	TAGGAGCGACACGTCCCGCGACTACTGAGCGC
CTATTCCCCACATGCGTGGGGTTGAACCG	CAAAACACCATGATTGTCGCCCATGAGTTCGT
CTATTCCCCACATGCGTGGGGTTGAACCG	TTACCGATTCCACGCCCATCAGAACGGAAGGG
CTATTCCCCACATGCGTGGGGTTGAACCG	GGATTCTCGGTTTACTGGAAAGTTGAAACGGA
CTATTCCCCACATGCGTGGGGTTGAACCG	TGAGGTCGATATAAATCCAAAAGTTATCTTAG
CTATTCCCCACATGCGTGGGGTTGAACCG	ACACCTGAAATAATTTTTCTTGGCTGGAAGAC
CTATTCCCCACATGCGTGGGGTTGAACCG	GCAATACGGGCAGAACTGAAAATTAAATTTCC
CTATTCCCCACATGCGTGGGGTTGAACCG	ATAATAAAATTGATAATAAAGAGAAAGAAAA
CTATTCCCCACATGCGTGGGGTTTGAGCT

Protein	Signature genes	Signature genes Name	Protein_function
CP024871.1\|AZQ03029.1\|3094700_3096833_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|223715
CP024871.1\|AZQ03027.1\|3092668_3092989_-\|QacE-family-quaternary-ammonium-compound-efflux-SMR-transporter	unknown	unknown	gnl\|CDD\|224987
CP024871.1\|AZQ03028.1\|3094042_3094699_+\|thiol:disulfide-oxidoreductase	unknown	unknown	gnl\|CDD\|183298
CP024871.1\|AZQ03861.1\|3099200_3100376_-\|acyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|173844
CP024871.1\|AZQ03860.1\|3093233_3093431_-\|hypothetical-protein	unknown	unknown	unknown
CP024871.1\|AZQ03025.1\|3091082_3092234_-\|DUF5009-domain-containing-protein	unknown	unknown	gnl\|CDD\|226749
CP024871.1\|AZQ03023.1\|3089038_3089923_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
CP024871.1\|AZQ03016.1\|3079873_3080071_+\|hypothetical-protein	unknown	unknown	unknown
CP024871.1\|AZQ03030.1\|3097013_3097748_-\|histidine-phosphatase-family-protein	unknown	unknown	gnl\|CDD\|132716
CP024871.1\|AZQ03859.1\|3080608_3083401_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|182031
CP024871.1\|AZQ03026.1\|3092342_3092528_+\|hypothetical-protein	unknown	unknown	unknown
CP024871.1\|AZQ03017.1\|3080254_3080479_+\|hypothetical-protein	unknown	unknown	unknown
CP024871.1\|AZQ03019.1\|3085019_3085556_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|187862
CP024871.1\|AZQ03018.1\|3083412_3085014_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09729_cas8e_CAS-I-E	gnl\|CDD\|187860
CP024871.1\|AZQ03032.1\|3098139_3099180_-\|phosphotransferase-family-protein	unknown	unknown	gnl\|CDD\|270703
CP024871.1\|AZQ03021.1\|3086626_3087373_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776
CP024871.1\|AZQ03022.1\|3087645_3088446_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09727_cas6e_CAS-I-E	gnl\|CDD\|215025
CP024871.1\|AZQ03020.1\|3085552_3086626_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|378153
CP024871.1\|AZQ03031.1\|3097754_3098150_-\|hypothetical-protein	unknown	unknown	unknown
CP024871.1\|AZQ03024.1\|3089855_3090287_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	pfam09707_cas2_CAS-I-E	gnl\|CDD\|378244

Protein	Function_ID	Function_description	E-value
CP024871.1\|AZQ03861.1\|3099200_3100376_-\|acyl-CoA-dehydrogenase	gnl\|CDD\|173844	cd01155, ACAD_FadE2, Acyl-CoA dehydrogenases similar to fadE2. FadE2-like Acyl-CoA dehydrogenase (ACAD). Acyl-CoA dehydrogenases (ACAD) catalyze the alpha,beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of ACAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. The ACAD family includes the eukaryotic beta-oxidation, as well as amino acid catabolism enzymes. These enzymes share high sequence similarity, but differ in their substrate specificities. ACAD's are generally homotetramers and have an active site glutamate at a conserved position.	4.29162e-116
CP024871.1\|AZQ03029.1\|3094700_3096833_-\|sensor-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	3.1205e-32
CP024871.1\|AZQ03028.1\|3094042_3094699_+\|thiol:disulfide-oxidoreductase	gnl\|CDD\|183298	PRK11752, PRK11752, putative S-transferase; Provisional.	8.85501e-70
CP024871.1\|AZQ03025.1\|3091082_3092234_-\|DUF5009-domain-containing-protein	gnl\|CDD\|226749	COG4299, COG4299, Uncharacterized protein conserved in bacteria [Function unknown].	5.61104e-57
CP024871.1\|AZQ03023.1\|3089038_3089923_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	8.1036e-143
CP024871.1\|AZQ03030.1\|3097013_3097748_-\|histidine-phosphatase-family-protein	gnl\|CDD\|132716	cd07040, HP, Histidine phosphatase domain found in a functionally diverse set of proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction. Catalytic domain of a functionally diverse set of proteins, most of which are phosphatases. The conserved catalytic core of this domain contains a His residue which is phosphorylated in the reaction. This set of proteins includes cofactor-dependent and cofactor-independent phosphoglycerate mutases (dPGM, and BPGM respectively), fructose-2,6-bisphosphatase (F26BP)ase, Sts-1, SixA, histidine acid phosphatases, phytases, and related proteins. Functions include roles in metabolism, signaling, or regulation, for example F26BPase affects glycolysis and gluconeogenesis through controlling the concentration of F26BP; BPGM controls the concentration of 2,3-BPG (the main allosteric effector of hemoglobin in human blood cells); human Sts-1 is a T-cell regulator; Escherichia coli Six A participates in the ArcB-dependent His-to-Asp phosphorelay signaling system; phytases scavenge phosphate from extracellular sources. Deficiency and mutation in many of the human members result in disease, for example erythrocyte BPGM deficiency is a disease associated with a decrease in the concentration of 2,3-BPG. Clinical applications include the use of prostatic acid phosphatase (PAP) as a serum marker for prostate cancer. Agricultural applications include the addition of phytases to animal feed.	6.01507e-10
CP024871.1\|AZQ03859.1\|3080608_3083401_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|182031	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3.	1.1216e-143
CP024871.1\|AZQ03027.1\|3092668_3092989_-\|QacE-family-quaternary-ammonium-compound-efflux-SMR-transporter	gnl\|CDD\|224987	COG2076, EmrE, Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism].	1.90865e-26
CP024871.1\|AZQ03019.1\|3085019_3085556_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	1.1804e-26
CP024871.1\|AZQ03018.1\|3083412_3085014_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|187860	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins, some contain Zn-finger domain; subunit of the Cascade complex; signature gene for I-E subtype; also known as Cse1/CasA/YgcL family.	2.97749e-147
CP024871.1\|AZQ03021.1\|3086626_3087373_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	2.34306e-51
CP024871.1\|AZQ03022.1\|3087645_3088446_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|215025	smart01101, CRISPR_assoc, This domain forms an anti-parallel beta strand structure with flanking alpha helical regions.	1.94374e-60
CP024871.1\|AZQ03020.1\|3085552_3086626_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|378153	pfam09344, Cas_CT1975, CT1975-like protein. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum.	1.35737e-116
CP024871.1\|AZQ03032.1\|3098139_3099180_-\|phosphotransferase-family-protein	gnl\|CDD\|270703	cd05154, ACAD10_11_N-like, N-terminal domain of Acyl-CoA dehydrogenase (ACAD) 10 and 11, and similar proteins. This subfamily is composed of the N-terminal domains of vertebrate ACAD10 and ACAD11, and similar uncharacterized bacterial and eukaryotic proteins. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 are both significantly expressed in human brain tissues. They contain a long N-terminal domain with similarity to phosphotransferases with a Protein Kinase fold, which is absent in other ACADs. They may exhibit multiple functions in acyl-CoA oxidation pathways. ACAD11 utilizes substrates with carbon chain lengths of 20 to 26, with optimal activity towards C22CoA. ACAD10 may be associated with an increased risk in type II diabetes. The ACAD10/11-like subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K).	1.27653e-56
CP024871.1\|AZQ03024.1\|3089855_3090287_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|378244	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978). This entry represents a minor branch of the Cas2 family of CRISPR-associated protein which are found in IPR003799. Cas proteins are found adjacent to a characteristic short, palindromic repeat cluster termed CRISPR, a probable mobile DNA element.	9.72709e-35

>CP024871.1|AZQ03024.1|3089855_3090287_+|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MVVLILERVKTSQRGEMSRLAIELKPGVFVASINARVRDQIWKKISEEWKSDAIMLYSSNSEQGYGIRSHGDPSREIMDFDGLLLMSKPDSKHDQKVIMSVSDFSKVTEDEVSPFSDLKGFFNEKANSLLLEADDPNESKEQT
>CP024871.1|AZQ03023.1|3089038_3089923_+|type-I-E-CRISPR-associated-endonuclease-Cas1
MPNRNLQELPKFEDNWSHLYFEKGRIDQFQKSIGFHYLDKVVPIPIETIGLLLLGPGTSITHEAIKRISDSRCLLAWTGEGGVRFYSAGYTGTYSARNLLRQVEAYGNPKERVSVIRRMYQFRFSDEIPADATIEQIRGLEGARVRKIYREWSENSGVPWKSRSYDQNSWDWSDPINRALSSANACLYGVVHAAILQSGFSPAIGFVHTGKQLSFVYDIADLYKAEITIPLAFEITAENTTNVERRVRLACRDKFKHSKLLKRIIPDIKELIYGGFDFGESEDFSEGRDVAVSH
>CP024871.1|AZQ03022.1|3087645_3088446_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MFLSQLKLDTLNINNKIVFNWIQNPYNIHQRLWMAFPEYSSKDKLRDSPFLFQLDYNSDPGKISPRILVLSEKLPNWERAFQEFKVLTEIPVGNQIKQISPTFIQVGTVLRFSLTANPTKKRKDYRSLFKKELEGFPDKLDPSDRVSFLEGKSKLEDLKKTLTKDQFKKLKSKRIGIYHKKGLLDWLSKKGNDSGFSLLNAVVEFQSDISANKIKGSSSPSIPKIHTVTFSGILKITDPVKFKLAYSKGIGPSKAFGCGMLLLAKT
>CP024871.1|AZQ03021.1|3086626_3087373_+|type-I-E-CRISPR-associated-protein-Cas5/CasD
MKDYLVFRLYGPLVSWGNIAVGEYRPSDSFPTKSAIIGLISASFGFDRSEDGKISELVESVFFATKVFTPGSLLRDYHTIQSPGNVKRFLLTRKDELLDSEYVETILSSRDYRVDAVYDVALSEKKRTSYSLKEIKNALLSPIYTPYLGRKSCPIALPMCPEILSSDSLLNAFEEYNKILMKKYESADYKDPLADLFSKSSANLFLWEDPAIELAEQDHIHSRRDTVLSRKRWQFQDRKEFFKSVSKA
>CP024871.1|AZQ03020.1|3085552_3086626_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MNRFIQIHFLTSYPPSNLNRDDLGRPKTAILGGANRLRISSQSLKRAWRTSDLFRETLSGHIGTRTKEKGKEIYQKLLDGKIPEKNARTWSKSIAGIFGKLKNPSEKELEKNPLLDLEIEQLSHFNKEENEAISSLIQKLIDTKKEPSNEDLNLLKKENSSSDIAMFGRMLASKPAFNIEAAVQVAHAITVHKVAIEDDFFTAVDDLNSGIEDVGAGHLGDVEFGSGLFYLYICVNRDQLLNNLNGNKDLAKRTIRALVETSSTISPTGKQNSFASRARALYCMTEKGNEQPRSLHSAFLNSVEDRGILNAAILKLESSRQNFEKVYGSCASGGFKTFNVDSGNGSLEEILEFAQED
>CP024871.1|AZQ03019.1|3085019_3085556_+|type-I-E-CRISPR-associated-protein-Cse2/CasB
MRFYENKEKYKEIIINWWTDLRSQTGDRAALRRCSNGLDTLLIPYTHRLISKLFQEGFQFFPDKIGPIAGILSHIEEDNPSTPFARSMARKEGEKPVINEIRFRKILQYSDILSEELFYQNMIRIVKNLKKKANLSDLSLSIYSWNQKTRKDWAYDYYGTPTSENDLDNLENPQGENQ
>CP024871.1|AZQ03018.1|3083412_3085014_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MNLIKDVWIPTQRFSGKLEEISPFEITSQIENDSDPIVSLNAPRPDFNGALLQFLIGLLQAVFPPENETEWEDLFVNPPSPKVLKEAMEKVESAFELFGDGPRFMQDTNLNEEDTVFDISALFIESPGENTIKLKKDFFIKRDSISQICEKCAGIGLFSFQTNSPSGGQGHLTSIRGGGPLSTFVTSKLKNPKKNSLWSKLWLNVLPKSYFQVNGQKKIPFQSVFPWTNPKIEDLQSKGKTTTTNDLHPLSVYWSYPRRILMRKEAENGICDVCNRSSFVLVRSYHTKTYGLSYSEGGWIHPFSPYYKSKESWLPYHPQPGGILYHYWQTIALGKEQADQAALVVRRFLNRKIPGEQTSILTFGYDMDNMKARCWYESEIPFFNIPSDKIEKFEEQVSQILNASTEIKKNLRQAVRNAWFDKNKDTKGDLAFLDVSFLKDTENSFYDLIRNVKENLISGVADFAALKETWLKLLNKSACKLFDQYADSGSFEFEDPERIVEARKNLKIFNLGSKTRIILGLIVPEKTSKRSKK
>CP024871.1|AZQ03859.1|3080608_3083401_+|CRISPR-associated-helicase/endonuclease-Cas3
MKAEEKSYYKYWGKANKKGDYHLLVYHCFDVAAVGEVYLSQNETLCVHFSQKLGIDLLTFKNIFVFFLILHDLGKFSDCFQSLIPNIKNALGNSNSPIGPYSIRHDSLGYIFWGRCILKDERFGNYSGFLTEQNWLGWNELQSPKDKSYFTEFTDVLIRCVTGHHGRPPSKNGYSGQTAVSLDSHFTEADRLAALDFSKEANRILSPNLNFKGDLKTLYDSMFQISFWLAGLSVLCDWIGSNAEIFKYHTTPIDLEEYYTKISLNNALKAVNKSGILPSKIAFNENHFGIFEYLQEPTPLQKFCSEVVLPDSPSLFILEDVTGSGKTEAALILTHRLMQKNAYSGFYVGLPTMATANGMYQRMSGVYRNLYTKESLPSLVLAHGARNLSDSFQSSVISDNAILADRNYSLQSDKNPEESASAICNIWLSDNQKKSLLADSGVGTIDQALLSVLSTKFQSLRMFGLSRKVLILDEVHSYDPYMVELICCLLKTQAKIGASVILLSATLPKILRKTFSESFALGLDTELQNIKSGEYPLVSLISDRSEVEETPIPTRKEVSRKLNVKFLFKQEPVLQKILEMSNQGRCVCWIRNTVSDASQAFSFLHSKLGDQVVLFHSRFAMGDRLNIESQILENFGIRSDQKSRKGKIVVATQVVEQSLDLDFDYIITDLAPIDLILQRAGRLHRHCRDISGNVKQGLDERGEPLLWIFSPEPIDDPKSDWFSQFSRGGGMVYSDHGKLWLTARLLQERKGWKMPEDARNLIESVYGIDVEVPQSFQENQSKVKNDKKKQESSAVLSTIRLELGYSALNETSWDDSKFSTRYGIDNSSKVVLAKFVSDRLVPWISDTNRNWQNSELPVPNYLVEKEFIFENSNIAEVISNCKINLPDKGKHCVLLPLFYTNNSWRGKALNKNNEVVSFIYDERFGFRKEK
>CP024871.1|AZQ03017.1|3080254_3080479_+|hypothetical-protein
MTKNRKKFHSCQTTEFQRTQIMENSDSQHCTEYNQSSLLHVTHHFYEEENYHSNGFPKSDTEYPPKLRLLKSNS
>CP024871.1|AZQ03016.1|3079873_3080071_+|hypothetical-protein
MCGTKKNFHARFWEMIPDQIANELFEESKNYIPKQMVEMLQMNQNTSCAKPHTCGENNLKTEFFV
>CP024871.1|AZQ03025.1|3091082_3092234_-|DUF5009-domain-containing-protein
MEKKSTQNKERILSLDLFRGMTVIGMILVNNPGSWSYIYSPLKHAEWNGCTPTDLVFPFFLFAVGVSIPISLYSKNGINRSKVWIGICIRSISLILLGLLLNFFGEWSFAELRVPGVLQRIGFVYWTVASLYLIFPGKKVLIFLILVLLVHTWILTHIIPPGESTVSLEQGKDIGAWIDRMIIGEKHLWKFSKTWDPEGLLSGIASIATSLFGVLCGFILFLREGVGKNRVLGIFGLGFLFTFVGLLWDQSLPMNKSLWTGSYAAYTAGLSFFCIGFFEYLNLLILLKEWNRLNLKILFQPLLVFGKNAILVFVGSGILARTLNLWTIMSENGKSIGIKTWFFSKLVFIADPYLASLLYAVLHLSVWWGILSFLDKRKIYIKV
>CP024871.1|AZQ03026.1|3092342_3092528_+|hypothetical-protein
MNSKKFIYPVSSIFQFELRFEFFPDATTSVLDSIQRYSFCKHLRWGQFFRKLKSLFQNLRM
>CP024871.1|AZQ03027.1|3092668_3092989_-|QacE-family-quaternary-ammonium-compound-efflux-SMR-transporter
MAWIYLIIASRFEIGFTTCLKLSDNFTKPTWIGGFVVSSVFSLAFLNKAVQTIPMGTAYAIWTGLGAAGTILVGIVIHGEPIDFWRGFFLSTLILSVLGLKFLVSE
>CP024871.1|AZQ03860.1|3093233_3093431_-|hypothetical-protein
MIGYFSFWKVSILRISSRRNHNIARLIEPNLSYLRFSFERFPKLQVCFGSVFIGFLRFRLIIIKF
>CP024871.1|AZQ03028.1|3094042_3094699_+|thiol:disulfide-oxidoreductase
MIELYSASTPNGRKVSIMLEELGIPYTIHPIDLDKLEQKQEWFLKINPNGRIPAIIDKDNGNFAVFESGAILIYLAEKNGKFLPNDPKEKSIALQWLMFQMGGVGPMQGQAGVFLKYAPEKIPFAISRYQNETKRLYSVLDRRLGESKFLAGKELSIADIATWPWVNIHDWVEISLDEFPNLKRWNEELAKRPAFIKGKDIPNKKDHKNNAEEVKKKV
>CP024871.1|AZQ03029.1|3094700_3096833_-|sensor-histidine-kinase
MTNLKNHSRFSVSDLGFLVFWISVILVIASFFGNYYYEERHIDRLIDNIHWTVSYLCAAALAWFGYFSVEGGIHRFRLWFALGLTANALGQLSWAIQVYLDYYIIPTPSDYLFPWVAPCFVIGYSIIVIECDRSRIRTAVLDALGLITAILTFSLALYLPQREGVGIPQLLPLINHPVSFLTAAALGVLLIPLLRLQPDKSWFFFILGMGGTGLCWLLWNAFFIVQIPPDGTVLNAGFSVSALILGYGALTWEPKFNDHPVWGRRFEAALRLLPLFEVVASSITIVLAGTLSGLPEGVRIIAWTGTTIVVVIASARQTFLVKEMTNAEQEIRLINEGLEGIVAKRTEELRTVNQYLTSKNEQVIQTIEDLKSTQKQLIRSEKMAVLGQLVAGIAHELNTPLGAIVSSNEGIRSVLSNSWEGLLRNYSRFTEEEKTIWEKLFSKGIALREFYDTREERVKRKKIAVLLNDFGFSEVMRLADMLTDLGISPDYVSENFKDLPQKEKLVMIAQNALSLSGLARASFTIEKAAEKASLVIQALKEYAYKDPAETTMGPVDVRKQLETVFTLYYSKYKTQVEIVRDMPETSCVWGNAESLTQVWINLIGNALYAMNYKGKMVISCKRAPTGLEIAIKDSGNGIEDTIRDRIFEPFFTTKPSGAGTGLGLDICRRIIEDHNGKIFFETSEQGTTFFVILPVAESSSEKLENSTLLI
>CP024871.1|AZQ03030.1|3097013_3097748_-|histidine-phosphatase-family-protein
MSFVHLIRHGQANSRGENYDLLTQHGKDQSFALGKFMAQNGELPDRIVTGTLRRHIETAESFMQGVISVSGDREKYKDGSFVHQDAGWDEFSMELWSAYSKLLASKRSEFAKTLSQYGKIRVRGGIRSAALFLRLTEEILRFWREGKETLEGIETYENFENRIFHSSNVLFSSANQERTFIFTSGTPISLVLNRFLRQDEDCFAWMPWIWNTSLNTFRWVRGKYLPVSINGVPHLPDNLSRTLL
>CP024871.1|AZQ03031.1|3097754_3098150_-|hypothetical-protein
MQDKPTSADLLEAIQDFLMKEVLPQFKDKELLSYKTLVSWNMLGVVSREIRLGEELLDKELGRLVELLNKNLVIPSTLNEKKNIAHAWNIELRDKIRKEKLSSENSRYWNHVKETVKEKVEVINPRFTTER
>CP024871.1|AZQ03032.1|3098139_3099180_-|phosphotransferase-family-protein
MNDTELKNVLEGYLSERLKGKTEIHSMVSLSGGACQENFAALIQVLDGPESGSYDTVFRTDKGAALLESLSREDEFGVCDLAYNAGVNTPKPFWLETDRGVTGSPFYFMQKISGKAIGRYVVKDPSLNKVRKQLTIDLAKNLARLHSIKPSDCKNEALRKTLWMGQDSNDKTVANGSIRSLRLELERMKDAYPAMEMILNWLEKKAKPSDDVVLIHGDFRTGNFMVTPEGLQGIVDWEFAHWGDRHEDLTWLCMRDWRFGKLNKEAGGFADRSEFYEEYEKVSGVKLNPEMVTYWEVMGNLRWAIGCIGQAERHLSGKDKGIELAAIGRRACEMEYEAMRIIENAG
>CP024871.1|AZQ03861.1|3099200_3100376_-|acyl-CoA-dehydrogenase
MDFTIPKEVEEIKKRIRDFVENDAIPAEVHYDYDHGRMPEKITEELRKRVKELGLWTPHLPKSEGGLGLDMVGTAIIFSELGRSPIAPYLCNCDAPDEGNMHLLHIAANKEQKEKYYDPLIQGKIRSAFAMTEPPPGAGADPQTLTTNAVKDGNEYVINGQKWYCTGANGASFLIVMSKVADSFRRTTMFLVPTNTPGYTMVREIGVMGSHGPGGHCELKFENVRVPESAILGRVGEGFKWSQERLGPARLTHCMRWIGLARRSMEIAREYALKREVFGQKLADHQGIQWMFAESALEIESGYMLTLKAAHTLRAGEDARHIISMAKWQVSETLCKTIDRAIQICGSHGYGRDMKLELFYRDARAARIADGPTEVHKMVIGRNLISGKSDF

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Identity
CP024871_1	1.11\|574848\|32\|CP024871\|CRISPRCasFinder,CRT,PILER-CR	574848-574879	32	CP024871.1	1966167-1966198	1.0
CP024871_1	1.11\|574848\|32\|CP024871\|CRISPRCasFinder,CRT,PILER-CR	574848-574879	32	CP024871.1	1982655-1982686	1.0
CP024871_1	1.11\|574848\|32\|CP024871\|CRISPRCasFinder,CRT,PILER-CR	574848-574879	32	CP024872.1	221174-221205	1.0
CP024871_2	2.1\|846438\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	846438-846469	32	CP024872.1	252027-252058	1.0
CP024871_2	2.2\|846499\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	846499-846530	32	CP024871.1	3609480-3609511	1.0
CP024871_2	2.3\|846560\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	846560-846591	32	CP024871.1	72719-72750	1.0
CP024871_2	2.4\|846621\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	846621-846652	32	CP024871.1	433113-433144	1.0
CP024871_2	2.4\|846621\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	846621-846652	32	CP024871.1	857833-857864	1.0
CP024871_2	2.4\|846621\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	846621-846652	32	CP024871.1	1051878-1051909	1.0
CP024871_2	2.4\|846621\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	846621-846652	32	CP024871.1	1265404-1265435	1.0
CP024871_2	2.4\|846621\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	846621-846652	32	CP024871.1	1501647-1501678	1.0
CP024871_2	2.4\|846621\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	846621-846652	32	CP024871.1	1605472-1605503	1.0
CP024871_2	2.4\|846621\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	846621-846652	32	CP024871.1	1980521-1980552	1.0
CP024871_2	2.4\|846621\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	846621-846652	32	CP024871.1	1983623-1983654	1.0
CP024871_2	2.4\|846621\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	846621-846652	32	CP024871.1	2256227-2256258	1.0
CP024871_2	2.4\|846621\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	846621-846652	32	CP024871.1	2663379-2663410	1.0
CP024871_2	2.4\|846621\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	846621-846652	32	CP024871.1	2672125-2672156	1.0
CP024871_2	2.4\|846621\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	846621-846652	32	CP024871.1	3043736-3043767	1.0
CP024871_2	2.4\|846621\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	846621-846652	32	CP024871.1	3434827-3434858	1.0
CP024871_2	2.4\|846621\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	846621-846652	32	CP024871.1	3436237-3436268	1.0
CP024871_2	2.4\|846621\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	846621-846652	32	CP024871.1	3441551-3441582	1.0
CP024871_2	2.4\|846621\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	846621-846652	32	CP024871.1	3636389-3636420	1.0
CP024871_2	2.4\|846621\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	846621-846652	32	CP024872.1	90217-90248	1.0
CP024871_2	2.4\|846621\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	846621-846652	32	CP024872.1	153115-153146	1.0
CP024871_2	2.4\|846621\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	846621-846652	32	CP024873.1	68966-68997	1.0
CP024871_2	2.4\|846621\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	846621-846652	32	CP024873.1	75349-75380	1.0
CP024871_2	2.5\|846682\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	846682-846713	32	CP024871.1	2482271-2482302	1.0
CP024871_4	4.1\|2768714\|38\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	2768714-2768751	38	CP024871.1	2482312-2482349	1.0
CP024871_6	6.1\|3090346\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	3090346-3090377	32	CP024871.1	2482302-2482333	1.0

1. spacer 1.11|574848|32|CP024871|CRISPRCasFinder,CRT,PILER-CR matches to position: 1966167-1966198, mismatch: 0, identity: 1.0

aaatacgtcgtaggaaaaaaactcctgaaagt	CRISPR spacer
aaatacgtcgtaggaaaaaaactcctgaaagt	Protospacer
********************************

2. spacer 1.11|574848|32|CP024871|CRISPRCasFinder,CRT,PILER-CR matches to position: 1982655-1982686, mismatch: 0, identity: 1.0

aaatacgtcgtaggaaaaaaactcctgaaagt	CRISPR spacer
aaatacgtcgtaggaaaaaaactcctgaaagt	Protospacer
********************************

3. spacer 1.11|574848|32|CP024871|CRISPRCasFinder,CRT,PILER-CR matches to position: 221174-221205, mismatch: 0, identity: 1.0

aaatacgtcgtaggaaaaaaactcctgaaagt	CRISPR spacer
aaatacgtcgtaggaaaaaaactcctgaaagt	Protospacer
********************************

4. spacer 2.1|846438|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to position: 252027-252058, mismatch: 0, identity: 1.0

aaagcacaccctttgtatacatgtttttccaa	CRISPR spacer
aaagcacaccctttgtatacatgtttttccaa	Protospacer
********************************

5. spacer 2.2|846499|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to position: 3609480-3609511, mismatch: 0, identity: 1.0

gatattaccagtaagctcaaaaaatgtagcaa	CRISPR spacer
gatattaccagtaagctcaaaaaatgtagcaa	Protospacer
********************************

6. spacer 2.3|846560|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to position: 72719-72750, mismatch: 0, identity: 1.0

cgacttgagcgtctttttctttattccaccat	CRISPR spacer
cgacttgagcgtctttttctttattccaccat	Protospacer
********************************

7. spacer 2.4|846621|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to position: 433113-433144, mismatch: 0, identity: 1.0

aaatctatcaagtggaagtctcagcggatctg	CRISPR spacer
aaatctatcaagtggaagtctcagcggatctg	Protospacer
********************************

8. spacer 2.4|846621|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to position: 857833-857864, mismatch: 0, identity: 1.0

aaatctatcaagtggaagtctcagcggatctg	CRISPR spacer
aaatctatcaagtggaagtctcagcggatctg	Protospacer
********************************

9. spacer 2.4|846621|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to position: 1051878-1051909, mismatch: 0, identity: 1.0

aaatctatcaagtggaagtctcagcggatctg	CRISPR spacer
aaatctatcaagtggaagtctcagcggatctg	Protospacer
********************************

10. spacer 2.4|846621|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to position: 1265404-1265435, mismatch: 0, identity: 1.0

aaatctatcaagtggaagtctcagcggatctg	CRISPR spacer
aaatctatcaagtggaagtctcagcggatctg	Protospacer
********************************

11. spacer 2.4|846621|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to position: 1501647-1501678, mismatch: 0, identity: 1.0

aaatctatcaagtggaagtctcagcggatctg	CRISPR spacer
aaatctatcaagtggaagtctcagcggatctg	Protospacer
********************************

12. spacer 2.4|846621|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to position: 1605472-1605503, mismatch: 0, identity: 1.0

aaatctatcaagtggaagtctcagcggatctg	CRISPR spacer
aaatctatcaagtggaagtctcagcggatctg	Protospacer
********************************

13. spacer 2.4|846621|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to position: 1980521-1980552, mismatch: 0, identity: 1.0

aaatctatcaagtggaagtctcagcggatctg	CRISPR spacer
aaatctatcaagtggaagtctcagcggatctg	Protospacer
********************************

14. spacer 2.4|846621|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to position: 1983623-1983654, mismatch: 0, identity: 1.0

aaatctatcaagtggaagtctcagcggatctg	CRISPR spacer
aaatctatcaagtggaagtctcagcggatctg	Protospacer
********************************

15. spacer 2.4|846621|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to position: 2256227-2256258, mismatch: 0, identity: 1.0

aaatctatcaagtggaagtctcagcggatctg	CRISPR spacer
aaatctatcaagtggaagtctcagcggatctg	Protospacer
********************************

16. spacer 2.4|846621|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to position: 2663379-2663410, mismatch: 0, identity: 1.0

aaatctatcaagtggaagtctcagcggatctg	CRISPR spacer
aaatctatcaagtggaagtctcagcggatctg	Protospacer
********************************

17. spacer 2.4|846621|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to position: 2672125-2672156, mismatch: 0, identity: 1.0

aaatctatcaagtggaagtctcagcggatctg	CRISPR spacer
aaatctatcaagtggaagtctcagcggatctg	Protospacer
********************************

18. spacer 2.4|846621|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to position: 3043736-3043767, mismatch: 0, identity: 1.0

aaatctatcaagtggaagtctcagcggatctg	CRISPR spacer
aaatctatcaagtggaagtctcagcggatctg	Protospacer
********************************

19. spacer 2.4|846621|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to position: 3434827-3434858, mismatch: 0, identity: 1.0

aaatctatcaagtggaagtctcagcggatctg	CRISPR spacer
aaatctatcaagtggaagtctcagcggatctg	Protospacer
********************************

20. spacer 2.4|846621|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to position: 3436237-3436268, mismatch: 0, identity: 1.0

aaatctatcaagtggaagtctcagcggatctg	CRISPR spacer
aaatctatcaagtggaagtctcagcggatctg	Protospacer
********************************

21. spacer 2.4|846621|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to position: 3441551-3441582, mismatch: 0, identity: 1.0

aaatctatcaagtggaagtctcagcggatctg	CRISPR spacer
aaatctatcaagtggaagtctcagcggatctg	Protospacer
********************************

22. spacer 2.4|846621|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to position: 3636389-3636420, mismatch: 0, identity: 1.0

aaatctatcaagtggaagtctcagcggatctg	CRISPR spacer
aaatctatcaagtggaagtctcagcggatctg	Protospacer
********************************

23. spacer 2.4|846621|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to position: 90217-90248, mismatch: 0, identity: 1.0

aaatctatcaagtggaagtctcagcggatctg	CRISPR spacer
aaatctatcaagtggaagtctcagcggatctg	Protospacer
********************************

24. spacer 2.4|846621|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to position: 153115-153146, mismatch: 0, identity: 1.0

aaatctatcaagtggaagtctcagcggatctg	CRISPR spacer
aaatctatcaagtggaagtctcagcggatctg	Protospacer
********************************

25. spacer 2.4|846621|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to position: 68966-68997, mismatch: 0, identity: 1.0

aaatctatcaagtggaagtctcagcggatctg	CRISPR spacer
aaatctatcaagtggaagtctcagcggatctg	Protospacer
********************************

26. spacer 2.4|846621|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to position: 75349-75380, mismatch: 0, identity: 1.0

aaatctatcaagtggaagtctcagcggatctg	CRISPR spacer
aaatctatcaagtggaagtctcagcggatctg	Protospacer
********************************

27. spacer 2.5|846682|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to position: 2482271-2482302, mismatch: 0, identity: 1.0

cgcatcagaacaatccaatgaagactcagggc	CRISPR spacer
cgcatcagaacaatccaatgaagactcagggc	Protospacer
********************************

28. spacer 4.1|2768714|38|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to position: 2482312-2482349, mismatch: 0, identity: 1.0

tcgggtcgcgaccccgtaggagcgacacgtcccgcgac	CRISPR spacer
tcgggtcgcgaccccgtaggagcgacacgtcccgcgac	Protospacer
**************************************

29. spacer 6.1|3090346|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to position: 2482302-2482333, mismatch: 0, identity: 1.0

taggagcgacacgtcccgcgactactgagcgc	CRISPR spacer
taggagcgacacgtcccgcgactactgagcgc	Protospacer
********************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP024871_1	1.2\|574299\|32\|CP024871\|CRISPRCasFinder,CRT,PILER-CR	574299-574330	32	MF974398	Leptospira mayottensis 200901116 plasmid p2_L200901116, complete sequence	18833-18864	0	1.0
CP024871_1	1.4\|574421\|32\|CP024871\|CRISPRCasFinder,CRT,PILER-CR	574421-574452	32	MF974398	Leptospira mayottensis 200901116 plasmid p2_L200901116, complete sequence	51356-51387	0	1.0
CP024871_1	1.4\|574421\|32\|CP024871\|CRISPRCasFinder,CRT,PILER-CR	574421-574452	32	NZ_CP030149	Leptospira mayottensis strain MDI272 plasmid p_Lmay_MDI272_tenre, complete sequence	8390-8421	0	1.0
CP024871_1	1.4\|574421\|32\|CP024871\|CRISPRCasFinder,CRT,PILER-CR	574421-574452	32	NZ_CP030149	Leptospira mayottensis strain MDI272 plasmid p_Lmay_MDI272_tenre, complete sequence	45225-45256	0	1.0
CP024871_2	2.4\|846621\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	846621-846652	32	NZ_CP024873	Leptospira mayottensis 200901116 plasmid p1_L200901116, complete sequence	68966-68997	0	1.0
CP024871_2	2.4\|846621\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	846621-846652	32	NZ_CP024873	Leptospira mayottensis 200901116 plasmid p1_L200901116, complete sequence	75349-75380	0	1.0
CP024871_4	4.4\|2768902\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	2768902-2768933	32	NZ_CP039285	Leptospira interrogans strain FMAS_AW1 plasmid pLiSL2, complete sequence	53631-53662	0	1.0
CP024871_4	4.4\|2768902\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	2768902-2768933	32	NZ_CP006725	Leptospira interrogans serovar Linhai str. 56609 plasmid lcp1, complete sequence	26657-26688	0	1.0
CP024871_4	4.5\|2768963\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	2768963-2768994	32	MF974398	Leptospira mayottensis 200901116 plasmid p2_L200901116, complete sequence	7778-7809	0	1.0
CP024871_4	4.9\|2769207\|32\|CP024871\|CRISPRCasFinder,CRT	2769207-2769238	32	MF974398	Leptospira mayottensis 200901116 plasmid p2_L200901116, complete sequence	52082-52113	0	1.0
CP024871_4	4.9\|2769207\|32\|CP024871\|CRISPRCasFinder,CRT	2769207-2769238	32	NZ_CP030149	Leptospira mayottensis strain MDI272 plasmid p_Lmay_MDI272_tenre, complete sequence	9116-9147	0	1.0
CP024871_4	4.9\|2769207\|32\|CP024871\|CRISPRCasFinder,CRT	2769207-2769238	32	NZ_CP030149	Leptospira mayottensis strain MDI272 plasmid p_Lmay_MDI272_tenre, complete sequence	45950-45981	0	1.0
CP024871_4	4.13\|2769206\|33\|CP024871\|PILER-CR	2769206-2769238	33	MF974398	Leptospira mayottensis 200901116 plasmid p2_L200901116, complete sequence	52082-52114	0	1.0
CP024871_4	4.13\|2769206\|33\|CP024871\|PILER-CR	2769206-2769238	33	NZ_CP030149	Leptospira mayottensis strain MDI272 plasmid p_Lmay_MDI272_tenre, complete sequence	9116-9148	0	1.0
CP024871_4	4.13\|2769206\|33\|CP024871\|PILER-CR	2769206-2769238	33	NZ_CP030149	Leptospira mayottensis strain MDI272 plasmid p_Lmay_MDI272_tenre, complete sequence	45950-45982	0	1.0
CP024871_1	1.10\|574787\|32\|CP024871\|CRISPRCasFinder,CRT,PILER-CR	574787-574818	32	MF974398	Leptospira mayottensis 200901116 plasmid p2_L200901116, complete sequence	41261-41292	1	0.969
CP024871_1	1.10\|574787\|32\|CP024871\|CRISPRCasFinder,CRT,PILER-CR	574787-574818	32	NZ_CP030149	Leptospira mayottensis strain MDI272 plasmid p_Lmay_MDI272_tenre, complete sequence	35131-35162	1	0.969
CP024871_2	2.13\|847170\|32\|CP024871\|CRISPRCasFinder,CRT	847170-847201	32	MF974398	Leptospira mayottensis 200901116 plasmid p2_L200901116, complete sequence	9595-9626	1	0.969
CP024871_6	6.8\|3090773\|31\|CP024871\|CRISPRCasFinder,CRT	3090773-3090803	31	MF974398	Leptospira mayottensis 200901116 plasmid p2_L200901116, complete sequence	19245-19275	1	0.968
CP024871_1	1.6\|574543\|32\|CP024871\|CRISPRCasFinder,CRT,PILER-CR	574543-574574	32	MF974398	Leptospira mayottensis 200901116 plasmid p2_L200901116, complete sequence	17614-17645	2	0.938
CP024871_1	1.7\|574604\|32\|CP024871\|CRISPRCasFinder,CRT,PILER-CR	574604-574635	32	MF974398	Leptospira mayottensis 200901116 plasmid p2_L200901116, complete sequence	51783-51814	2	0.938
CP024871_1	1.7\|574604\|32\|CP024871\|CRISPRCasFinder,CRT,PILER-CR	574604-574635	32	NZ_CP030149	Leptospira mayottensis strain MDI272 plasmid p_Lmay_MDI272_tenre, complete sequence	8817-8848	2	0.938
CP024871_1	1.8\|574665\|32\|CP024871\|CRISPRCasFinder,CRT,PILER-CR	574665-574696	32	MF974398	Leptospira mayottensis 200901116 plasmid p2_L200901116, complete sequence	51783-51814	2	0.938
CP024871_1	1.8\|574665\|32\|CP024871\|CRISPRCasFinder,CRT,PILER-CR	574665-574696	32	NZ_CP030149	Leptospira mayottensis strain MDI272 plasmid p_Lmay_MDI272_tenre, complete sequence	8817-8848	2	0.938
CP024871_4	4.6\|2769024\|32\|CP024871\|CRISPRCasFinder,CRT	2769024-2769055	32	MF974398	Leptospira mayottensis 200901116 plasmid p2_L200901116, complete sequence	13219-13250	2	0.938
CP024871_1	1.7\|574604\|32\|CP024871\|CRISPRCasFinder,CRT,PILER-CR	574604-574635	32	NZ_CP030149	Leptospira mayottensis strain MDI272 plasmid p_Lmay_MDI272_tenre, complete sequence	45650-45681	3	0.906
CP024871_1	1.8\|574665\|32\|CP024871\|CRISPRCasFinder,CRT,PILER-CR	574665-574696	32	NZ_CP030149	Leptospira mayottensis strain MDI272 plasmid p_Lmay_MDI272_tenre, complete sequence	45650-45681	3	0.906
CP024871_6	6.8\|3090773\|31\|CP024871\|CRISPRCasFinder,CRT	3090773-3090803	31	NZ_CP015805	Borrelia mayonii strain MN14-1539 plasmid lp28-10	6599-6629	3	0.903
CP024871_6	6.8\|3090773\|31\|CP024871\|CRISPRCasFinder,CRT	3090773-3090803	31	NZ_CP015790	Borrelia mayonii strain MN14-1420 plasmid lp28-10, complete sequence	6599-6629	3	0.903
CP024871_1	1.3\|574360\|32\|CP024871\|CRISPRCasFinder,CRT,PILER-CR	574360-574391	32	NZ_CP045273	Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence	543528-543559	4	0.875
CP024871_6	6.8\|3090773\|31\|CP024871\|CRISPRCasFinder,CRT	3090773-3090803	31	NC_001949	Lactococcus lactis DPC3147 plasmid pMRC01, complete sequence	9675-9705	6	0.806
CP024871_6	6.8\|3090773\|31\|CP024871\|CRISPRCasFinder,CRT	3090773-3090803	31	MN694132	Marine virus AFVG_250M1196, complete genome	31467-31497	6	0.806
CP024871_6	6.8\|3090773\|31\|CP024871\|CRISPRCasFinder,CRT	3090773-3090803	31	MT724048	Staphylococcus phage SAP3, partial genome	5736-5766	6	0.806
CP024871_6	6.8\|3090773\|31\|CP024871\|CRISPRCasFinder,CRT	3090773-3090803	31	NZ_CP022700	Acetobacter tropicalis strain BDGP1 plasmid pAtBDGP1A, complete sequence	38289-38319	6	0.806
CP024871_1	1.5\|574482\|32\|CP024871\|CRISPRCasFinder,CRT,PILER-CR	574482-574513	32	NZ_CP048306	Escherichia coli strain 9 plasmid p009_B, complete sequence	4435-4466	7	0.781
CP024871_1	1.5\|574482\|32\|CP024871\|CRISPRCasFinder,CRT,PILER-CR	574482-574513	32	NZ_CP019027	Escherichia coli strain Ecol_881 plasmid pEC881_2, complete sequence	86799-86830	7	0.781
CP024871_1	1.9\|574726\|32\|CP024871\|CRISPRCasFinder,CRT,PILER-CR	574726-574757	32	NZ_CP019039	Bacillus velezensis strain GH1-13 plasmid unnamed, complete sequence	19909-19940	7	0.781
CP024871_2	2.17\|847292\|30\|CP024871\|CRT	847292-847321	30	NZ_CP029232	Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence	660012-660041	7	0.767
CP024871_4	4.3\|2768842\|31\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	2768842-2768872	31	NZ_KP738729	Aeromonas sp. Ne-1 plasmid pNe-1, complete sequence	31514-31544	7	0.774
CP024871_4	4.3\|2768842\|31\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	2768842-2768872	31	NC_014023	Bacillus megaterium QM B1551 plasmid pBM700, complete sequence	117015-117045	7	0.774
CP024871_4	4.8\|2769146\|32\|CP024871\|CRISPRCasFinder,CRT	2769146-2769177	32	NZ_AP018727	Streptococcus dysgalactiae strain Kdys0611 plasmid pFGCSD1, complete sequence	15725-15756	7	0.781
CP024871_4	4.8\|2769146\|32\|CP024871\|CRISPRCasFinder,CRT	2769146-2769177	32	NZ_AP018728	Streptococcus dysgalactiae strain Kdys0611 plasmid pFGCSD2, complete sequence	4702-4733	7	0.781
CP024871_4	4.8\|2769146\|32\|CP024871\|CRISPRCasFinder,CRT	2769146-2769177	32	NZ_AP018730	Streptococcus dysgalactiae strain Kdys0611 plasmid pFGCSD4, complete sequence	3169-3200	7	0.781
CP024871_4	4.8\|2769146\|32\|CP024871\|CRISPRCasFinder,CRT	2769146-2769177	32	MK448662	Streptococcus satellite phage Javan97, complete genome	12709-12740	7	0.781
CP024871_6	6.3\|3090468\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	3090468-3090499	32	MN602267	Bacteriophage DSS3_PM1, complete genome	65505-65536	7	0.781
CP024871_6	6.3\|3090468\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	3090468-3090499	32	MN602266	Bacteriophage DSS3_VP1, complete genome	47029-47060	7	0.781
CP024871_6	6.5\|3090590\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	3090590-3090621	32	AP014289	Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S24-C75, * SEQUENCING IN PROGRESS *	19776-19807	7	0.781
CP024871_6	6.8\|3090773\|31\|CP024871\|CRISPRCasFinder,CRT	3090773-3090803	31	NZ_CP013122	Fusobacterium nucleatum subsp. polymorphum strain ChDC F306 plasmid unnamed1, complete sequence	10685-10715	7	0.774
CP024871_6	6.8\|3090773\|31\|CP024871\|CRISPRCasFinder,CRT	3090773-3090803	31	NZ_CP053316	Bacillus circulans strain GN03 plasmid unnamed, complete sequence	2448-2478	7	0.774
CP024871_6	6.8\|3090773\|31\|CP024871\|CRISPRCasFinder,CRT	3090773-3090803	31	NC_022111	Prevotella sp. oral taxon 299 str. F0039 plasmid, complete sequence	194085-194115	7	0.774
CP024871_6	6.8\|3090773\|31\|CP024871\|CRISPRCasFinder,CRT	3090773-3090803	31	NC_021277	Fusobacterium nucleatum subsp. animalis 4_8 plasmid unnamed, complete sequence	2470-2500	7	0.774
CP024871_6	6.8\|3090773\|31\|CP024871\|CRISPRCasFinder,CRT	3090773-3090803	31	MT939487	Erwinia phage pEa_SNUABM_47, complete genome	252046-252076	7	0.774
CP024871_6	6.8\|3090773\|31\|CP024871\|CRISPRCasFinder,CRT	3090773-3090803	31	MK764446	Flavobacterium phage FPSV-S18, complete genome	11703-11733	7	0.774
CP024871_6	6.8\|3090773\|31\|CP024871\|CRISPRCasFinder,CRT	3090773-3090803	31	MK764439	Flavobacterium phage FPSV-D22, complete genome	17392-17422	7	0.774
CP024871_6	6.8\|3090773\|31\|CP024871\|CRISPRCasFinder,CRT	3090773-3090803	31	MT939486	Erwinia phage pEa_SNUABM_12, complete genome	252786-252816	7	0.774
CP024871_6	6.8\|3090773\|31\|CP024871\|CRISPRCasFinder,CRT	3090773-3090803	31	NC_031932	Flavobacterium phage Fpv10, complete genome	22346-22376	7	0.774
CP024871_6	6.8\|3090773\|31\|CP024871\|CRISPRCasFinder,CRT	3090773-3090803	31	MK764444	Flavobacterium phage FPSV-S3, complete genome	25278-25308	7	0.774
CP024871_6	6.8\|3090773\|31\|CP024871\|CRISPRCasFinder,CRT	3090773-3090803	31	NC_041917	Serratia phage BF, complete genome	252759-252789	7	0.774
CP024871_6	6.8\|3090773\|31\|CP024871\|CRISPRCasFinder,CRT	3090773-3090803	31	KT876725	Flavobacterium phage FpV9, complete genome	22346-22376	7	0.774
CP024871_6	6.8\|3090773\|31\|CP024871\|CRISPRCasFinder,CRT	3090773-3090803	31	MK764443	Flavobacterium phage FPSV-S2, complete genome	30501-30531	7	0.774
CP024871_6	6.8\|3090773\|31\|CP024871\|CRISPRCasFinder,CRT	3090773-3090803	31	MT939488	Erwinia phage pEa_SNUABM_50, complete genome	251917-251947	7	0.774
CP024871_6	6.8\|3090773\|31\|CP024871\|CRISPRCasFinder,CRT	3090773-3090803	31	MK764438	Flavobacterium phage FPSV-D19, complete genome	12080-12110	7	0.774
CP024871_6	6.8\|3090773\|31\|CP024871\|CRISPRCasFinder,CRT	3090773-3090803	31	NC_031921	Flavobacterium phage Fpv5, complete genome	22346-22376	7	0.774
CP024871_6	6.8\|3090773\|31\|CP024871\|CRISPRCasFinder,CRT	3090773-3090803	31	NC_031945	Flavobacterium phage Fpv11, complete genome	22340-22370	7	0.774
CP024871_6	6.8\|3090773\|31\|CP024871\|CRISPRCasFinder,CRT	3090773-3090803	31	NC_031938	Flavobacterium phage Fpv6, complete genome	22406-22436	7	0.774
CP024871_6	6.8\|3090773\|31\|CP024871\|CRISPRCasFinder,CRT	3090773-3090803	31	MK764436	Flavobacterium phage FPSV-D2, complete genome	2769-2799	7	0.774
CP024871_6	6.8\|3090773\|31\|CP024871\|CRISPRCasFinder,CRT	3090773-3090803	31	NC_031905	Flavobacterium phage Fpv7, complete genome	22346-22376	7	0.774
CP024871_6	6.8\|3090773\|31\|CP024871\|CRISPRCasFinder,CRT	3090773-3090803	31	MK764447	Flavobacterium phage FPSV-S20, complete genome	17825-17855	7	0.774
CP024871_6	6.8\|3090773\|31\|CP024871\|CRISPRCasFinder,CRT	3090773-3090803	31	KU599883	Flavobacterium phage Fpv8, complete genome	22346-22376	7	0.774
CP024871_1	1.1\|574238\|32\|CP024871\|CRISPRCasFinder,CRT	574238-574269	32	MN855733	Siphoviridae sp. isolate 355, complete genome	39156-39187	8	0.75
CP024871_1	1.6\|574543\|32\|CP024871\|CRISPRCasFinder,CRT,PILER-CR	574543-574574	32	NZ_CP029830	Azospirillum ramasamyi strain M2T2B2 plasmid unnamed1, complete sequence	856105-856136	8	0.75
CP024871_1	1.6\|574543\|32\|CP024871\|CRISPRCasFinder,CRT,PILER-CR	574543-574574	32	NC_016585	Azospirillum lipoferum 4B plasmid AZO_p1, complete sequence	388606-388637	8	0.75
CP024871_1	1.6\|574543\|32\|CP024871\|CRISPRCasFinder,CRT,PILER-CR	574543-574574	32	MN586022	Gordonia phage Chidiebere, complete genome	68906-68937	8	0.75
CP024871_2	2.2\|846499\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	846499-846530	32	MN694477	Marine virus AFVG_250M1149, complete genome	26914-26945	8	0.75
CP024871_2	2.2\|846499\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	846499-846530	32	MN693738	Marine virus AFVG_250M1148, complete genome	26698-26729	8	0.75
CP024871_2	2.4\|846621\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	846621-846652	32	MG250483	Aeromonas phage Ah1, complete genome	82758-82789	8	0.75
CP024871_2	2.13\|847170\|32\|CP024871\|CRISPRCasFinder,CRT	847170-847201	32	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	4970-5001	8	0.75
CP024871_2	2.13\|847170\|32\|CP024871\|CRISPRCasFinder,CRT	847170-847201	32	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	96070-96101	8	0.75
CP024871_4	4.2\|2768781\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	2768781-2768812	32	KU599879	Flavobacterium phage Fpv3, complete genome	72924-72955	8	0.75
CP024871_4	4.2\|2768781\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	2768781-2768812	32	MK764441	Flavobacterium phage FPSV-F12, complete genome	30257-30288	8	0.75
CP024871_4	4.2\|2768781\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	2768781-2768812	32	KU599886	Flavobacterium phage Fpv20, complete genome	75696-75727	8	0.75
CP024871_4	4.2\|2768781\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	2768781-2768812	32	NC_031931	Flavobacterium phage Fpv2, complete genome	75517-75548	8	0.75
CP024871_4	4.2\|2768781\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	2768781-2768812	32	KT876726	Flavobacterium phage FpV21, complete genome	75508-75539	8	0.75
CP024871_4	4.2\|2768781\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	2768781-2768812	32	KT876724	Flavobacterium phage FpV4, complete genome	72865-72896	8	0.75
CP024871_4	4.2\|2768781\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	2768781-2768812	32	KU599877	Flavobacterium phage Fpv1, complete genome	75542-75573	8	0.75
CP024871_4	4.2\|2768781\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	2768781-2768812	32	MK764449	Flavobacterium phage FPSV-S29, complete genome	75564-75595	8	0.75
CP024871_4	4.3\|2768842\|31\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	2768842-2768872	31	NZ_CP022711	Lactobacillus sakei strain WiKim0063 plasmid pLBS02, complete sequence	2601-2631	8	0.742
CP024871_4	4.3\|2768842\|31\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	2768842-2768872	31	NZ_CP038167	Enterococcus faecium strain SC3-1 plasmid pSC3-1, complete sequence	28209-28239	8	0.742
CP024871_4	4.3\|2768842\|31\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	2768842-2768872	31	NZ_CP031213	Lactobacillus brevis strain UCCLB521 plasmid pUCCLB521_E, complete sequence	7100-7130	8	0.742
CP024871_4	4.3\|2768842\|31\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	2768842-2768872	31	NZ_CP014879	Lactobacillus backii strain TMW 1.1989 plasmid pL11989-6, complete sequence	7610-7640	8	0.742
CP024871_4	4.3\|2768842\|31\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	2768842-2768872	31	CP019349	Lactobacillus plantarum strain KLDS1.0391 plasmid unnamed1, complete sequence	5603-5633	8	0.742
CP024871_4	4.3\|2768842\|31\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	2768842-2768872	31	NZ_CP031203	Lactobacillus brevis strain UCCLBBS449 plasmid pUCCLBBS449_E, complete sequence	1194-1224	8	0.742
CP024871_4	4.3\|2768842\|31\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	2768842-2768872	31	NZ_CP038162	Enterococcus faecium strain GZ8 plasmid pGZ8, complete sequence	23430-23460	8	0.742
CP024871_4	4.3\|2768842\|31\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	2768842-2768872	31	NZ_CP014905	Lactobacillus backii strain TMW 1.2002 plasmid pL12002-6, complete sequence	11900-11930	8	0.742
CP024871_6	6.3\|3090468\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	3090468-3090499	32	NZ_CP017563	Paraburkholderia sprentiae WSM5005 plasmid pl1WSM5005, complete sequence	658189-658220	8	0.75
CP024871_6	6.8\|3090773\|31\|CP024871\|CRISPRCasFinder,CRT	3090773-3090803	31	NZ_CP045268	Bacillus megaterium strain FDU301 plasmid pFDU301F, complete sequence	15273-15303	8	0.742
CP024871_6	6.8\|3090773\|31\|CP024871\|CRISPRCasFinder,CRT	3090773-3090803	31	NZ_CP031276	Staphylococcus xylosus strain 2 plasmid unnamed1, complete sequence	12106-12136	8	0.742
CP024871_6	6.8\|3090773\|31\|CP024871\|CRISPRCasFinder,CRT	3090773-3090803	31	NZ_CP013709	Clostridium botulinum strain F634 plasmid pRSJ2_2, complete sequence	153358-153388	8	0.742
CP024871_6	6.8\|3090773\|31\|CP024871\|CRISPRCasFinder,CRT	3090773-3090803	31	NZ_CP009921	Bacillus megaterium NBRC 15308 = ATCC 14581 plasmid pBMV_2, complete sequence	101767-101797	8	0.742
CP024871_6	6.8\|3090773\|31\|CP024871\|CRISPRCasFinder,CRT	3090773-3090803	31	NZ_CP035095	Bacillus megaterium NBRC 15308 = ATCC 14581 plasmid unnamed1, complete sequence	73908-73938	8	0.742
CP024871_6	6.8\|3090773\|31\|CP024871\|CRISPRCasFinder,CRT	3090773-3090803	31	NZ_CP013844	Clostridium botulinum strain A634 plasmid pRSJ19_2, complete sequence	198795-198825	8	0.742
CP024871_6	6.8\|3090773\|31\|CP024871\|CRISPRCasFinder,CRT	3090773-3090803	31	MK448403	Streptococcus satellite phage Javan289, complete genome	1329-1359	8	0.742
CP024871_6	6.8\|3090773\|31\|CP024871\|CRISPRCasFinder,CRT	3090773-3090803	31	MK448579	Streptococcus satellite phage Javan619, complete genome	1327-1357	8	0.742
CP024871_6	6.8\|3090773\|31\|CP024871\|CRISPRCasFinder,CRT	3090773-3090803	31	LR215723	Yersinia phage fPS-90 genome assembly, chromosome: I	35894-35924	8	0.742
CP024871_6	6.8\|3090773\|31\|CP024871\|CRISPRCasFinder,CRT	3090773-3090803	31	MT682714	Escherichia phage vB_EcoM_Lutter, complete genome	36963-36993	8	0.742
CP024871_6	6.8\|3090773\|31\|CP024871\|CRISPRCasFinder,CRT	3090773-3090803	31	KU878088	Bacillus phage AR9, complete genome	205636-205666	8	0.742
CP024871_6	6.8\|3090773\|31\|CP024871\|CRISPRCasFinder,CRT	3090773-3090803	31	LR746311	Shigella phage vB_SsoM_113 genome assembly, chromosome: 1	35481-35511	8	0.742
CP024871_6	6.8\|3090773\|31\|CP024871\|CRISPRCasFinder,CRT	3090773-3090803	31	MK373779	Escherichia phage vB_EcoM_G9062, complete genome	36286-36316	8	0.742
CP024871_6	6.8\|3090773\|31\|CP024871\|CRISPRCasFinder,CRT	3090773-3090803	31	MN694298	Marine virus AFVG_250M557, complete genome	46498-46528	8	0.742
CP024871_1	1.1\|574238\|32\|CP024871\|CRISPRCasFinder,CRT	574238-574269	32	HQ259105	Escherichia phage vB_EcoP_G7C, complete genome	26848-26879	9	0.719
CP024871_1	1.5\|574482\|32\|CP024871\|CRISPRCasFinder,CRT,PILER-CR	574482-574513	32	NZ_CP025133	Planococcus sp. MB-3u-03 plasmid unnamed10	657-688	9	0.719
CP024871_2	2.1\|846438\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	846438-846469	32	MN694120	Marine virus AFVG_250M1160, complete genome	31754-31785	9	0.719
CP024871_2	2.2\|846499\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	846499-846530	32	MN694424	Marine virus AFVG_250M468, complete genome	29533-29564	9	0.719
CP024871_2	2.8\|846865\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	846865-846896	32	MN694346	Marine virus AFVG_250M477, complete genome	2576-2607	9	0.719
CP024871_2	2.10\|846987\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	846987-847018	32	KP282677	Sulfolobus monocaudavirus SMV3, complete genome	53682-53713	9	0.719
CP024871_2	2.10\|846987\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	846987-847018	32	AP013483	Uncultured Mediterranean phage uvMED DNA, complete genome, group G19, isolate: uvMED-CGR-C20A-MedDCM-OCT-S30-C71	13221-13252	9	0.719
CP024871_2	2.10\|846987\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	846987-847018	32	AP013484	Uncultured Mediterranean phage uvMED DNA, complete genome, group G19, isolate: uvMED-CGR-C20A-MedDCM-OCT-S36-C79	18731-18762	9	0.719
CP024871_2	2.10\|846987\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	846987-847018	32	NC_048016	Erwinia phage Wellington, complete genome	103837-103868	9	0.719
CP024871_2	2.10\|846987\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	846987-847018	32	NC_019529	Vibrio phage pVp-1, complete genome	79796-79827	9	0.719
CP024871_2	2.12\|847109\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	847109-847140	32	NZ_CP022999	Rhizobium sp. 11515TR strain 10195 plasmid p11515TR-A, complete sequence	122653-122684	9	0.719
CP024871_4	4.2\|2768781\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	2768781-2768812	32	NC_024215	Lactococcus phage P078, complete genome	17138-17169	9	0.719
CP024871_4	4.2\|2768781\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	2768781-2768812	32	NC_024214	Lactococcus phage P162, complete genome	17153-17184	9	0.719
CP024871_4	4.2\|2768781\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	2768781-2768812	32	NC_024203	Lactococcus phage P092, complete genome	17139-17170	9	0.719
CP024871_4	4.7\|2769085\|32\|CP024871\|CRISPRCasFinder,CRT	2769085-2769116	32	NZ_CP020333	Martelella mediterranea DSM 17316 strain MACL11 plasmid pMM170, complete sequence	117830-117861	9	0.719
CP024871_6	6.5\|3090590\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	3090590-3090621	32	NZ_KP453775	Klebsiella pneumoniae strain ST11 plasmid pKP12226, complete sequence	9073-9104	9	0.719
CP024871_6	6.5\|3090590\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	3090590-3090621	32	NZ_CP031917	Escherichia coli O45:H2 strain FWSEC0003 plasmid unnamed11, complete sequence	78488-78519	9	0.719
CP024871_6	6.5\|3090590\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	3090590-3090621	32	NZ_CP020522	Escherichia coli strain 190 plasmid unnamed3, complete sequence	62356-62387	9	0.719
CP024871_6	6.5\|3090590\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	3090590-3090621	32	NZ_CP021729	Escherichia coli strain Combat11I9 plasmid pCombat11I9-3, complete sequence	56070-56101	9	0.719
CP024871_6	6.5\|3090590\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	3090590-3090621	32	NZ_CP039843	Escherichia coli O157:H7 strain USDA5905 plasmid pUSDA5905_1	49728-49759	9	0.719
CP024871_6	6.5\|3090590\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	3090590-3090621	32	NZ_AP018804	Escherichia coli strain E2863 plasmid pE2863-2, complete sequence	18565-18596	9	0.719
CP024871_6	6.5\|3090590\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	3090590-3090621	32	NZ_AP018809	Escherichia coli strain E2865 plasmid pE2865-1, complete sequence	82932-82963	9	0.719
CP024871_6	6.5\|3090590\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	3090590-3090621	32	NZ_CP015837	Escherichia coli strain MS6198 plasmid pMS6198C, complete sequence	49502-49533	9	0.719
CP024871_6	6.5\|3090590\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	3090590-3090621	32	NZ_CP033848	Escherichia coli strain FDAARGOS_497 plasmid unnamed2, complete sequence	49735-49766	9	0.719
CP024871_6	6.5\|3090590\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	3090590-3090621	32	NZ_MH580301	Escherichia coli strain 1107 plasmid p1107-99K, complete sequence	28099-28130	9	0.719
CP024871_6	6.5\|3090590\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	3090590-3090621	32	NZ_CP020434	Bacillus sp. FDAARGOS_235 plasmid 1, complete sequence	67557-67588	9	0.719
CP024871_6	6.6\|3090651\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	3090651-3090682	32	NZ_CP047653	Bombella sp. KACC 21507 plasmid unnamed1, complete sequence	6836-6867	9	0.719
CP024871_6	6.8\|3090773\|31\|CP024871\|CRISPRCasFinder,CRT	3090773-3090803	31	NZ_CP013844	Clostridium botulinum strain A634 plasmid pRSJ19_2, complete sequence	14513-14543	9	0.71
CP024871_1	1.4\|574421\|32\|CP024871\|CRISPRCasFinder,CRT,PILER-CR	574421-574452	32	MN694124	Marine virus AFVG_250M1008, complete genome	37211-37242	10	0.688
CP024871_1	1.6\|574543\|32\|CP024871\|CRISPRCasFinder,CRT,PILER-CR	574543-574574	32	NZ_CP013486	Vibrio alginolyticus strain ATCC 33787 plasmid pMBL128, complete sequence	28627-28658	10	0.688
CP024871_2	2.2\|846499\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	846499-846530	32	NZ_CP024332	Borrelia miyamotoi strain Yekat-6 plasmid pYkt6-lp6, complete sequence	2217-2248	10	0.688
CP024871_2	2.2\|846499\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	846499-846530	32	NZ_KT355574	Borrelia miyamotoi LB-2001 plasmid cpD, complete sequence	3887-3918	10	0.688
CP024871_2	2.2\|846499\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	846499-846530	32	NZ_CP024407	Borrelia miyamotoi strain Izh-4 plasmid pIzh4-lp6, complete sequence	3684-3715	10	0.688
CP024871_2	2.2\|846499\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	846499-846530	32	NZ_CP024222	Borrelia miyamotoi strain Izh-5 plasmid pIzh5-lp6, complete sequence	3684-3715	10	0.688
CP024871_2	2.2\|846499\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	846499-846530	32	NZ_CP024350	Borrelia miyamotoi strain Yekat-1 plasmid pYkt1-lp6, complete sequence	3684-3715	10	0.688
CP024871_2	2.2\|846499\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	846499-846530	32	NZ_CP024370	Borrelia miyamotoi strain Izh-16 plasmid pIzh16-lp6, complete sequence	3684-3715	10	0.688
CP024871_2	2.2\|846499\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	846499-846530	32	NZ_CP024389	Borrelia miyamotoi strain Izh-14 plasmid pIzh14-lp6-1, complete sequence	3684-3715	10	0.688
CP024871_2	2.3\|846560\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	846560-846591	32	NC_017284	Campylobacter jejuni subsp. jejuni IA3902 plasmid pVir, complete sequence	5897-5928	10	0.688
CP024871_2	2.3\|846560\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	846560-846591	32	NZ_CP014746	Campylobacter jejuni strain OD267 plasmid pCJDM67 S, complete sequence	11370-11401	10	0.688
CP024871_2	2.3\|846560\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	846560-846591	32	NZ_CP007184	Campylobacter coli RM1875 plasmid pRM1875_35kb, complete sequence	11787-11818	10	0.688
CP024871_2	2.3\|846560\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	846560-846591	32	NC_008770	Campylobacter jejuni subsp. jejuni 81-176 plasmid pVir, complete sequence	5897-5928	10	0.688
CP024871_2	2.3\|846560\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	846560-846591	32	NZ_CP010074	Campylobacter jejuni subsp. jejuni strain 01-1512 plasmid pCj2, complete sequence	11443-11474	10	0.688
CP024871_2	2.3\|846560\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	846560-846591	32	NZ_CP038864	Campylobacter jejuni strain SCJK2 plasmid p2, complete sequence	17514-17545	10	0.688
CP024871_2	2.3\|846560\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	846560-846591	32	CP013734	Campylobacter coli strain OR12 plasmid pOR12Vir, complete sequence	6535-6566	10	0.688
CP024871_2	2.4\|846621\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	846621-846652	32	MT114163	Mycobacterium phage Settecandela, complete genome	19888-19919	10	0.688
CP024871_2	2.4\|846621\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	846621-846652	32	MK937592	Mycobacterium phage Phrappuccino, complete genome	19888-19919	10	0.688
CP024871_2	2.7\|846804\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	846804-846835	32	NZ_LR134416	Legionella adelaidensis strain NCTC12735 genome assembly, plasmid: 7	113-144	10	0.688
CP024871_2	2.7\|846804\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	846804-846835	32	MW057857	Providencia phage PSTCR5, complete genome	44000-44031	10	0.688
CP024871_2	2.7\|846804\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	846804-846835	32	KY363465	Providencia phage vB_PreS_PR1, complete genome	102227-102258	10	0.688
CP024871_2	2.13\|847170\|32\|CP024871\|CRISPRCasFinder,CRT	847170-847201	32	MH542234	Staphylococcus phage Terranova, complete genome	84935-84966	10	0.688
CP024871_2	2.13\|847170\|32\|CP024871\|CRISPRCasFinder,CRT	847170-847201	32	NC_041928	Staphylococcus phage phiIBB-SEP1, complete genome	48080-48111	10	0.688
CP024871_2	2.13\|847170\|32\|CP024871\|CRISPRCasFinder,CRT	847170-847201	32	MF417868	Uncultured Caudovirales phage clone 7AX_1, partial genome	97957-97988	10	0.688
CP024871_2	2.13\|847170\|32\|CP024871\|CRISPRCasFinder,CRT	847170-847201	32	KP027447	Staphylococcus phage phiIPLA-C1C, complete genome	48186-48217	10	0.688
CP024871_2	2.13\|847170\|32\|CP024871\|CRISPRCasFinder,CRT	847170-847201	32	MH321490	Staphylococcus phage Quidividi, complete genome	84138-84169	10	0.688
CP024871_2	2.13\|847170\|32\|CP024871\|CRISPRCasFinder,CRT	847170-847201	32	MH321491	Staphylococcus phage Twillingate, complete genome	84468-84499	10	0.688
CP024871_4	4.2\|2768781\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	2768781-2768812	32	NZ_CP032528	Bacillus megaterium NCT-2 plasmid pNCT2_1, complete sequence	106673-106704	10	0.688
CP024871_4	4.2\|2768781\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	2768781-2768812	32	AP014414	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C24-MedDCM-OCT-S26-C171, * SEQUENCING IN PROGRESS *, 2 ordered pieces	5672-5703	10	0.688
CP024871_4	4.6\|2769024\|32\|CP024871\|CRISPRCasFinder,CRT	2769024-2769055	32	NZ_CP034911	Ensifer alkalisoli strain YIC4027 plasmid unnamed, complete sequence	326569-326600	10	0.688
CP024871_4	4.6\|2769024\|32\|CP024871\|CRISPRCasFinder,CRT	2769024-2769055	32	LN997845	Streptomyces reticuli genome assembly TUE45, plasmid : IV	69658-69689	10	0.688
CP024871_4	4.9\|2769207\|32\|CP024871\|CRISPRCasFinder,CRT	2769207-2769238	32	NC_007974	Cupriavidus metallidurans CH34 megaplasmid, complete sequence	2521463-2521494	10	0.688
CP024871_4	4.9\|2769207\|32\|CP024871\|CRISPRCasFinder,CRT	2769207-2769238	32	NZ_CP046333	Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed3	1105841-1105872	10	0.688
CP024871_6	6.5\|3090590\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	3090590-3090621	32	NC_017296	Clostridium acetobutylicum EA 2018 plasmid pEA2018, complete sequence	131118-131149	10	0.688
CP024871_6	6.5\|3090590\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	3090590-3090621	32	NC_015686	Clostridium acetobutylicum DSM 1731 plasmid pSMBa, complete sequence	131118-131149	10	0.688
CP024871_6	6.5\|3090590\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	3090590-3090621	32	NC_001988	Clostridium acetobutylicum ATCC 824 plasmid pSOL1, complete sequence	131118-131149	10	0.688
CP024871_6	6.8\|3090773\|31\|CP024871\|CRISPRCasFinder,CRT	3090773-3090803	31	CP016195	Bacillus thuringiensis serovar coreanensis strain ST7 plasmid pST7-1, complete sequence	92935-92965	10	0.677
CP024871_6	6.8\|3090773\|31\|CP024871\|CRISPRCasFinder,CRT	3090773-3090803	31	MH542234	Staphylococcus phage Terranova, complete genome	22553-22583	10	0.677

1. spacer 1.2|574299|32|CP024871|CRISPRCasFinder,CRT,PILER-CR matches to MF974398 (Leptospira mayottensis 200901116 plasmid p2_L200901116, complete sequence) position: , mismatch: 0, identity: 1.0

gggttcgggttaactgacggggaaaagatcat	CRISPR spacer
gggttcgggttaactgacggggaaaagatcat	Protospacer
********************************

2. spacer 1.4|574421|32|CP024871|CRISPRCasFinder,CRT,PILER-CR matches to MF974398 (Leptospira mayottensis 200901116 plasmid p2_L200901116, complete sequence) position: , mismatch: 0, identity: 1.0

ttattagttcaggaactgcgtttataaacaaa	CRISPR spacer
ttattagttcaggaactgcgtttataaacaaa	Protospacer
********************************

3. spacer 1.4|574421|32|CP024871|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP030149 (Leptospira mayottensis strain MDI272 plasmid p_Lmay_MDI272_tenre, complete sequence) position: , mismatch: 0, identity: 1.0

ttattagttcaggaactgcgtttataaacaaa	CRISPR spacer
ttattagttcaggaactgcgtttataaacaaa	Protospacer
********************************

4. spacer 1.4|574421|32|CP024871|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP030149 (Leptospira mayottensis strain MDI272 plasmid p_Lmay_MDI272_tenre, complete sequence) position: , mismatch: 0, identity: 1.0

ttattagttcaggaactgcgtttataaacaaa	CRISPR spacer
ttattagttcaggaactgcgtttataaacaaa	Protospacer
********************************

5. spacer 2.4|846621|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024873 (Leptospira mayottensis 200901116 plasmid p1_L200901116, complete sequence) position: , mismatch: 0, identity: 1.0

aaatctatcaagtggaagtctcagcggatctg	CRISPR spacer
aaatctatcaagtggaagtctcagcggatctg	Protospacer
********************************

6. spacer 2.4|846621|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024873 (Leptospira mayottensis 200901116 plasmid p1_L200901116, complete sequence) position: , mismatch: 0, identity: 1.0

aaatctatcaagtggaagtctcagcggatctg	CRISPR spacer
aaatctatcaagtggaagtctcagcggatctg	Protospacer
********************************

7. spacer 4.4|2768902|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039285 (Leptospira interrogans strain FMAS_AW1 plasmid pLiSL2, complete sequence) position: , mismatch: 0, identity: 1.0

ggagatttaacgtctcctattccgaaccaacc	CRISPR spacer
ggagatttaacgtctcctattccgaaccaacc	Protospacer
********************************

8. spacer 4.4|2768902|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP006725 (Leptospira interrogans serovar Linhai str. 56609 plasmid lcp1, complete sequence) position: , mismatch: 0, identity: 1.0

ggagatttaacgtctcctattccgaaccaacc	CRISPR spacer
ggagatttaacgtctcctattccgaaccaacc	Protospacer
********************************

9. spacer 4.5|2768963|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to MF974398 (Leptospira mayottensis 200901116 plasmid p2_L200901116, complete sequence) position: , mismatch: 0, identity: 1.0

gggataacgcgtttgcctaatacgtaatttga	CRISPR spacer
gggataacgcgtttgcctaatacgtaatttga	Protospacer
********************************

10. spacer 4.9|2769207|32|CP024871|CRISPRCasFinder,CRT matches to MF974398 (Leptospira mayottensis 200901116 plasmid p2_L200901116, complete sequence) position: , mismatch: 0, identity: 1.0

ttttagtgtcgaacgtcgggccactcggccca	CRISPR spacer
ttttagtgtcgaacgtcgggccactcggccca	Protospacer
********************************

11. spacer 4.9|2769207|32|CP024871|CRISPRCasFinder,CRT matches to NZ_CP030149 (Leptospira mayottensis strain MDI272 plasmid p_Lmay_MDI272_tenre, complete sequence) position: , mismatch: 0, identity: 1.0

ttttagtgtcgaacgtcgggccactcggccca	CRISPR spacer
ttttagtgtcgaacgtcgggccactcggccca	Protospacer
********************************

12. spacer 4.9|2769207|32|CP024871|CRISPRCasFinder,CRT matches to NZ_CP030149 (Leptospira mayottensis strain MDI272 plasmid p_Lmay_MDI272_tenre, complete sequence) position: , mismatch: 0, identity: 1.0

ttttagtgtcgaacgtcgggccactcggccca	CRISPR spacer
ttttagtgtcgaacgtcgggccactcggccca	Protospacer
********************************

13. spacer 4.13|2769206|33|CP024871|PILER-CR matches to MF974398 (Leptospira mayottensis 200901116 plasmid p2_L200901116, complete sequence) position: , mismatch: 0, identity: 1.0

gttttagtgtcgaacgtcgggccactcggccca	CRISPR spacer
gttttagtgtcgaacgtcgggccactcggccca	Protospacer
*********************************

14. spacer 4.13|2769206|33|CP024871|PILER-CR matches to NZ_CP030149 (Leptospira mayottensis strain MDI272 plasmid p_Lmay_MDI272_tenre, complete sequence) position: , mismatch: 0, identity: 1.0

gttttagtgtcgaacgtcgggccactcggccca	CRISPR spacer
gttttagtgtcgaacgtcgggccactcggccca	Protospacer
*********************************

15. spacer 4.13|2769206|33|CP024871|PILER-CR matches to NZ_CP030149 (Leptospira mayottensis strain MDI272 plasmid p_Lmay_MDI272_tenre, complete sequence) position: , mismatch: 0, identity: 1.0

gttttagtgtcgaacgtcgggccactcggccca	CRISPR spacer
gttttagtgtcgaacgtcgggccactcggccca	Protospacer
*********************************

16. spacer 1.10|574787|32|CP024871|CRISPRCasFinder,CRT,PILER-CR matches to MF974398 (Leptospira mayottensis 200901116 plasmid p2_L200901116, complete sequence) position: , mismatch: 1, identity: 0.969

tgattaagcttaacagttatcttatcccaata	CRISPR spacer
tgattaagcttaacagttatcttatgccaata	Protospacer
************************* ******

17. spacer 1.10|574787|32|CP024871|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP030149 (Leptospira mayottensis strain MDI272 plasmid p_Lmay_MDI272_tenre, complete sequence) position: , mismatch: 1, identity: 0.969

tgattaagcttaacagttatcttatcccaata	CRISPR spacer
tgattaagcttaacagttatcttatgccaata	Protospacer
************************* ******

18. spacer 2.13|847170|32|CP024871|CRISPRCasFinder,CRT matches to MF974398 (Leptospira mayottensis 200901116 plasmid p2_L200901116, complete sequence) position: , mismatch: 1, identity: 0.969

taggctatagctataacatttattgccatagc	CRISPR spacer
taggctatggctataacatttattgccatagc	Protospacer
********.***********************

19. spacer 6.8|3090773|31|CP024871|CRISPRCasFinder,CRT matches to MF974398 (Leptospira mayottensis 200901116 plasmid p2_L200901116, complete sequence) position: , mismatch: 1, identity: 0.968

ataataaaattgataataaagagaaagaaaa	CRISPR spacer
atagtaaaattgataataaagagaaagaaaa	Protospacer
***.***************************

20. spacer 1.6|574543|32|CP024871|CRISPRCasFinder,CRT,PILER-CR matches to MF974398 (Leptospira mayottensis 200901116 plasmid p2_L200901116, complete sequence) position: , mismatch: 2, identity: 0.938

tcctctacctgctcaggagtgtagccctcgcc	CRISPR spacer
tcctctacctgctcaagagtgtagccctcgct	Protospacer
***************.***************.

21. spacer 1.7|574604|32|CP024871|CRISPRCasFinder,CRT,PILER-CR matches to MF974398 (Leptospira mayottensis 200901116 plasmid p2_L200901116, complete sequence) position: , mismatch: 2, identity: 0.938

gggatactcaaaacctctcgacgggttcatgt	CRISPR spacer
ggggtattcaaaacctctcgacgggttcatgt	Protospacer
***.**.*************************

22. spacer 1.7|574604|32|CP024871|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP030149 (Leptospira mayottensis strain MDI272 plasmid p_Lmay_MDI272_tenre, complete sequence) position: , mismatch: 2, identity: 0.938

gggatactcaaaacctctcgacgggttcatgt	CRISPR spacer
ggggtattcaaaacctctcgacgggttcatgt	Protospacer
***.**.*************************

23. spacer 1.8|574665|32|CP024871|CRISPRCasFinder,CRT,PILER-CR matches to MF974398 (Leptospira mayottensis 200901116 plasmid p2_L200901116, complete sequence) position: , mismatch: 2, identity: 0.938

gggatactcaaaacctctcgacgggttcatgt	CRISPR spacer
ggggtattcaaaacctctcgacgggttcatgt	Protospacer
***.**.*************************

24. spacer 1.8|574665|32|CP024871|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP030149 (Leptospira mayottensis strain MDI272 plasmid p_Lmay_MDI272_tenre, complete sequence) position: , mismatch: 2, identity: 0.938

gggatactcaaaacctctcgacgggttcatgt	CRISPR spacer
ggggtattcaaaacctctcgacgggttcatgt	Protospacer
***.**.*************************

25. spacer 4.6|2769024|32|CP024871|CRISPRCasFinder,CRT matches to MF974398 (Leptospira mayottensis 200901116 plasmid p2_L200901116, complete sequence) position: , mismatch: 2, identity: 0.938

aatctcgatctgttcctcacggttcggtgtgt	CRISPR spacer
aatctcgatctgttcctcacggttcggggtat	Protospacer
*************************** **.*

26. spacer 1.7|574604|32|CP024871|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP030149 (Leptospira mayottensis strain MDI272 plasmid p_Lmay_MDI272_tenre, complete sequence) position: , mismatch: 3, identity: 0.906

gggatactcaaaacctctcgacgggttcatgt	CRISPR spacer
agggtattcaaaacctctcgacgggttcatgt	Protospacer
.**.**.*************************

27. spacer 1.8|574665|32|CP024871|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP030149 (Leptospira mayottensis strain MDI272 plasmid p_Lmay_MDI272_tenre, complete sequence) position: , mismatch: 3, identity: 0.906

gggatactcaaaacctctcgacgggttcatgt	CRISPR spacer
agggtattcaaaacctctcgacgggttcatgt	Protospacer
.**.**.*************************

28. spacer 6.8|3090773|31|CP024871|CRISPRCasFinder,CRT matches to NZ_CP015805 (Borrelia mayonii strain MN14-1539 plasmid lp28-10) position: , mismatch: 3, identity: 0.903

ataataaaattgataataaagagaaagaaaa	CRISPR spacer
ataataatattaataataaagagaaagaaac	Protospacer
******* ***.******************

29. spacer 6.8|3090773|31|CP024871|CRISPRCasFinder,CRT matches to NZ_CP015790 (Borrelia mayonii strain MN14-1420 plasmid lp28-10, complete sequence) position: , mismatch: 3, identity: 0.903

ataataaaattgataataaagagaaagaaaa	CRISPR spacer
ataataatattaataataaagagaaagaaac	Protospacer
******* ***.******************

30. spacer 1.3|574360|32|CP024871|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP045273 (Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence) position: , mismatch: 4, identity: 0.875

ccaactccataacaaagcactggccacattgt	CRISPR spacer
caaactccataacaaagcattggccacaaagt	Protospacer
* *****************.********  **

31. spacer 6.8|3090773|31|CP024871|CRISPRCasFinder,CRT matches to NC_001949 (Lactococcus lactis DPC3147 plasmid pMRC01, complete sequence) position: , mismatch: 6, identity: 0.806

ataataaaattgataataaagagaaagaaaa	CRISPR spacer
ctaataagattgataataaagataaaagcaa	Protospacer
 ******.************** ***.. **

32. spacer 6.8|3090773|31|CP024871|CRISPRCasFinder,CRT matches to MN694132 (Marine virus AFVG_250M1196, complete genome) position: , mismatch: 6, identity: 0.806

ataataaaattgataataaagagaaagaaaa	CRISPR spacer
ataataaaattaataataaagaaataataga	Protospacer
***********.**********.* *. *.*

33. spacer 6.8|3090773|31|CP024871|CRISPRCasFinder,CRT matches to MT724048 (Staphylococcus phage SAP3, partial genome) position: , mismatch: 6, identity: 0.806

ataataaaattgataataaagagaaagaaaa	CRISPR spacer
agacaaatattgattataaagagaaagaaca	Protospacer
* *  ** ****** ************** *

34. spacer 6.8|3090773|31|CP024871|CRISPRCasFinder,CRT matches to NZ_CP022700 (Acetobacter tropicalis strain BDGP1 plasmid pAtBDGP1A, complete sequence) position: , mismatch: 6, identity: 0.806

-ataataaaattgataataaagagaaagaaaa	CRISPR spacer
gataa-gaaattaaaaataaagagaaagaagg	Protospacer
 **** .*****.* ***************..

35. spacer 1.5|574482|32|CP024871|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP048306 (Escherichia coli strain 9 plasmid p009_B, complete sequence) position: , mismatch: 7, identity: 0.781

taatcctaatgacaattctttaatagctgtca	CRISPR spacer
aaagccaaatgacaattctttaatatccggcg	Protospacer
 ** ** ****************** *.* *.

36. spacer 1.5|574482|32|CP024871|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019027 (Escherichia coli strain Ecol_881 plasmid pEC881_2, complete sequence) position: , mismatch: 7, identity: 0.781

taatcctaatgacaattctttaatagctgtca	CRISPR spacer
aaagccaaatgacaattctttaatatccggcg	Protospacer
 ** ** ****************** *.* *.

37. spacer 1.9|574726|32|CP024871|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019039 (Bacillus velezensis strain GH1-13 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

ttttgcagcctgtctctcttttgcctcttctg	CRISPR spacer
tatttgcgcctgtctttctttttcctcttctt	Protospacer
* **   ********.****** ********

38. spacer 2.17|847292|30|CP024871|CRT matches to NZ_CP029232 (Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence) position: , mismatch: 7, identity: 0.767

ttcccatccttcgcttgcgcgtttcatttg	CRISPR spacer
gtctcatccttcgcttgcgcgtctgaaaag	Protospacer
 **.******************.* *   *

39. spacer 4.3|2768842|31|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KP738729 (Aeromonas sp. Ne-1 plasmid pNe-1, complete sequence) position: , mismatch: 7, identity: 0.774

taaaaagttcaatagaagttcaagctcctaa	CRISPR spacer
aaaaaagttcaatagaaattgaagaaaataa	Protospacer
 ****************.** ***    ***

40. spacer 4.3|2768842|31|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to NC_014023 (Bacillus megaterium QM B1551 plasmid pBM700, complete sequence) position: , mismatch: 7, identity: 0.774

taaaaagttcaatagaagttcaagctcctaa	CRISPR spacer
taatgagttcaatagaagttcaacttaaaaa	Protospacer
*** .****************** .*   **

41. spacer 4.8|2769146|32|CP024871|CRISPRCasFinder,CRT matches to NZ_AP018727 (Streptococcus dysgalactiae strain Kdys0611 plasmid pFGCSD1, complete sequence) position: , mismatch: 7, identity: 0.781

ttgacagtgaccgcaccctttttagtgagccg	CRISPR spacer
ttcaaggtgaccgcaccctttataatgagttg	Protospacer
** * .*************** **.****..*

42. spacer 4.8|2769146|32|CP024871|CRISPRCasFinder,CRT matches to NZ_AP018728 (Streptococcus dysgalactiae strain Kdys0611 plasmid pFGCSD2, complete sequence) position: , mismatch: 7, identity: 0.781

ttgacagtgaccgcaccctttttagtgagccg	CRISPR spacer
ttcaaggtgaccgcaccctttataatgagttg	Protospacer
** * .*************** **.****..*

43. spacer 4.8|2769146|32|CP024871|CRISPRCasFinder,CRT matches to NZ_AP018730 (Streptococcus dysgalactiae strain Kdys0611 plasmid pFGCSD4, complete sequence) position: , mismatch: 7, identity: 0.781

ttgacagtgaccgcaccctttttagtgagccg	CRISPR spacer
ttcaaggtgaccgcaccctttataatgagttg	Protospacer
** * .*************** **.****..*

44. spacer 4.8|2769146|32|CP024871|CRISPRCasFinder,CRT matches to MK448662 (Streptococcus satellite phage Javan97, complete genome) position: , mismatch: 7, identity: 0.781

ttgacagtgaccgcaccctttttagtgagccg	CRISPR spacer
ttcaaggtgaccgcaccctttataatgagttg	Protospacer
** * .*************** **.****..*

45. spacer 6.3|3090468|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to MN602267 (Bacteriophage DSS3_PM1, complete genome) position: , mismatch: 7, identity: 0.781

--ttaccgattccacgcccatcagaacggaaggg	CRISPR spacer
gcttaac--tttcacgcccatcaggacggaagcc	Protospacer
  *** *  **.************.*******

46. spacer 6.3|3090468|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to MN602266 (Bacteriophage DSS3_VP1, complete genome) position: , mismatch: 7, identity: 0.781

--ttaccgattccacgcccatcagaacggaaggg	CRISPR spacer
gcttaac--tttcacgcccatcaggacggaagcc	Protospacer
  *** *  **.************.*******

47. spacer 6.5|3090590|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to AP014289 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S24-C75, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 7, identity: 0.781

tgaggtcgatataaatccaaaagttatcttag	CRISPR spacer
tgaggtggatataaatccaaaagatttaaaaa	Protospacer
****** **************** * *   *.

48. spacer 6.8|3090773|31|CP024871|CRISPRCasFinder,CRT matches to NZ_CP013122 (Fusobacterium nucleatum subsp. polymorphum strain ChDC F306 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.774

ataataaaattgataataaagagaaagaaaa	CRISPR spacer
agaaaataattgataataaagagaaaattat	Protospacer
* ** * *******************.  *

49. spacer 6.8|3090773|31|CP024871|CRISPRCasFinder,CRT matches to NZ_CP053316 (Bacillus circulans strain GN03 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.774

ataataaaattgataataaagagaaagaaaa	CRISPR spacer
aaaatgaaattgataataaacagaaaagtat	Protospacer
* ***.************** *****.. *

50. spacer 6.8|3090773|31|CP024871|CRISPRCasFinder,CRT matches to NC_022111 (Prevotella sp. oral taxon 299 str. F0039 plasmid, complete sequence) position: , mismatch: 7, identity: 0.774

ataataaaattgataataaagagaaagaaaa	CRISPR spacer
caaggaaaatggataataaacagaaagaaca	Protospacer
  *. ***** ********* ******** *

51. spacer 6.8|3090773|31|CP024871|CRISPRCasFinder,CRT matches to NC_021277 (Fusobacterium nucleatum subsp. animalis 4_8 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.774

ataataaaattgataataaagagaaagaaaa	CRISPR spacer
agaaaataattgataataaagagaaaattat	Protospacer
* ** * *******************.  *

52. spacer 6.8|3090773|31|CP024871|CRISPRCasFinder,CRT matches to MT939487 (Erwinia phage pEa_SNUABM_47, complete genome) position: , mismatch: 7, identity: 0.774

ataataaaattgataataaagagaaagaaaa	CRISPR spacer
ctgataaaattgataataaagttaaagtatt	Protospacer
 *.******************  **** *

53. spacer 6.8|3090773|31|CP024871|CRISPRCasFinder,CRT matches to MK764446 (Flavobacterium phage FPSV-S18, complete genome) position: , mismatch: 7, identity: 0.774

ataataaaattgataataaagagaaagaaaa	CRISPR spacer
ataataaaaatgataataaagaaatatcatt	Protospacer
********* ************.* *  *

54. spacer 6.8|3090773|31|CP024871|CRISPRCasFinder,CRT matches to MK764439 (Flavobacterium phage FPSV-D22, complete genome) position: , mismatch: 7, identity: 0.774

ataataaaattgataataaagagaaagaaaa	CRISPR spacer
ataataaaaatgataataaagaaatatcatt	Protospacer
********* ************.* *  *

55. spacer 6.8|3090773|31|CP024871|CRISPRCasFinder,CRT matches to MT939486 (Erwinia phage pEa_SNUABM_12, complete genome) position: , mismatch: 7, identity: 0.774

ataataaaattgataataaagagaaagaaaa	CRISPR spacer
ctgataaaattgataataaagttaaagtatt	Protospacer
 *.******************  **** *

56. spacer 6.8|3090773|31|CP024871|CRISPRCasFinder,CRT matches to NC_031932 (Flavobacterium phage Fpv10, complete genome) position: , mismatch: 7, identity: 0.774

ataataaaattgataataaagagaaagaaaa	CRISPR spacer
ataataaaaatgataataaagaaatatcatt	Protospacer
********* ************.* *  *

57. spacer 6.8|3090773|31|CP024871|CRISPRCasFinder,CRT matches to MK764444 (Flavobacterium phage FPSV-S3, complete genome) position: , mismatch: 7, identity: 0.774

ataataaaattgataataaagagaaagaaaa	CRISPR spacer
ataataaaaatgataataaagaaatatcatt	Protospacer
********* ************.* *  *

58. spacer 6.8|3090773|31|CP024871|CRISPRCasFinder,CRT matches to NC_041917 (Serratia phage BF, complete genome) position: , mismatch: 7, identity: 0.774

ataataaaattgataataaagagaaagaaaa	CRISPR spacer
ctgataaaattgataataaagttaaagtatt	Protospacer
 *.******************  **** *

59. spacer 6.8|3090773|31|CP024871|CRISPRCasFinder,CRT matches to KT876725 (Flavobacterium phage FpV9, complete genome) position: , mismatch: 7, identity: 0.774

ataataaaattgataataaagagaaagaaaa	CRISPR spacer
ataataaaaatgataataaagaaatatcatt	Protospacer
********* ************.* *  *

60. spacer 6.8|3090773|31|CP024871|CRISPRCasFinder,CRT matches to MK764443 (Flavobacterium phage FPSV-S2, complete genome) position: , mismatch: 7, identity: 0.774

ataataaaattgataataaagagaaagaaaa	CRISPR spacer
ataataaaaatgataataaagaaatatcatt	Protospacer
********* ************.* *  *

61. spacer 6.8|3090773|31|CP024871|CRISPRCasFinder,CRT matches to MT939488 (Erwinia phage pEa_SNUABM_50, complete genome) position: , mismatch: 7, identity: 0.774

ataataaaattgataataaagagaaagaaaa	CRISPR spacer
ctgataaaattgataataaagttaaagtatt	Protospacer
 *.******************  **** *

62. spacer 6.8|3090773|31|CP024871|CRISPRCasFinder,CRT matches to MK764438 (Flavobacterium phage FPSV-D19, complete genome) position: , mismatch: 7, identity: 0.774

ataataaaattgataataaagagaaagaaaa	CRISPR spacer
ataataaaaatgataataaagaaatatcatt	Protospacer
********* ************.* *  *

63. spacer 6.8|3090773|31|CP024871|CRISPRCasFinder,CRT matches to NC_031921 (Flavobacterium phage Fpv5, complete genome) position: , mismatch: 7, identity: 0.774

ataataaaattgataataaagagaaagaaaa	CRISPR spacer
ataataaaaatgataataaagaaatatcatt	Protospacer
********* ************.* *  *

64. spacer 6.8|3090773|31|CP024871|CRISPRCasFinder,CRT matches to NC_031945 (Flavobacterium phage Fpv11, complete genome) position: , mismatch: 7, identity: 0.774

ataataaaattgataataaagagaaagaaaa	CRISPR spacer
ataataaaaatgataataaagaaatatcatt	Protospacer
********* ************.* *  *

65. spacer 6.8|3090773|31|CP024871|CRISPRCasFinder,CRT matches to NC_031938 (Flavobacterium phage Fpv6, complete genome) position: , mismatch: 7, identity: 0.774

ataataaaattgataataaagagaaagaaaa	CRISPR spacer
ataataaaaatgataataaagaaatatcatt	Protospacer
********* ************.* *  *

66. spacer 6.8|3090773|31|CP024871|CRISPRCasFinder,CRT matches to MK764436 (Flavobacterium phage FPSV-D2, complete genome) position: , mismatch: 7, identity: 0.774

ataataaaattgataataaagagaaagaaaa	CRISPR spacer
ataataaaaatgataataaagaaatatcatt	Protospacer
********* ************.* *  *

67. spacer 6.8|3090773|31|CP024871|CRISPRCasFinder,CRT matches to NC_031905 (Flavobacterium phage Fpv7, complete genome) position: , mismatch: 7, identity: 0.774

ataataaaattgataataaagagaaagaaaa	CRISPR spacer
ataataaaaatgataataaagaaatatcatt	Protospacer
********* ************.* *  *

68. spacer 6.8|3090773|31|CP024871|CRISPRCasFinder,CRT matches to MK764447 (Flavobacterium phage FPSV-S20, complete genome) position: , mismatch: 7, identity: 0.774

ataataaaattgataataaagagaaagaaaa	CRISPR spacer
ataataaaaatgataataaagaaatatcatt	Protospacer
********* ************.* *  *

69. spacer 6.8|3090773|31|CP024871|CRISPRCasFinder,CRT matches to KU599883 (Flavobacterium phage Fpv8, complete genome) position: , mismatch: 7, identity: 0.774

ataataaaattgataataaagagaaagaaaa	CRISPR spacer
ataataaaaatgataataaagaaatatcatt	Protospacer
********* ************.* *  *

70. spacer 1.1|574238|32|CP024871|CRISPRCasFinder,CRT matches to MN855733 (Siphoviridae sp. isolate 355, complete genome) position: , mismatch: 8, identity: 0.75

tggatttactttaacgaaaaaccggttgccga	CRISPR spacer
tggatttactctaacgagaaaccaatactcgc	Protospacer
**********.******.*****..*  .**

71. spacer 1.6|574543|32|CP024871|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029830 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

tcctctacctgctcaggagtgtagccctcgcc-	CRISPR spacer
gcctccacctgctcgggagtgtag-aagcgcgg	Protospacer
 ****.********.*********    ***

72. spacer 1.6|574543|32|CP024871|CRISPRCasFinder,CRT,PILER-CR matches to NC_016585 (Azospirillum lipoferum 4B plasmid AZO_p1, complete sequence) position: , mismatch: 8, identity: 0.75

tcctctacctgctcaggagtgtagccctcgcc-	CRISPR spacer
gcctccacctgctcaggcgtgtag-aagcgcgg	Protospacer
 ****.*********** ******    ***

73. spacer 1.6|574543|32|CP024871|CRISPRCasFinder,CRT,PILER-CR matches to MN586022 (Gordonia phage Chidiebere, complete genome) position: , mismatch: 8, identity: 0.75

tcctctacctgctcaggagtgtagccctcgcc	CRISPR spacer
tacgccgcctgctcgggcgtgtagccctcgaa	Protospacer
* * *..*******.** ************

74. spacer 2.2|846499|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to MN694477 (Marine virus AFVG_250M1149, complete genome) position: , mismatch: 8, identity: 0.75

gatattaccagtaagctcaaaaaatgtagcaa	CRISPR spacer
cacactacaagtaagctcaacaaatgtagttc	Protospacer
 *.*.*** *********** ********.

75. spacer 2.2|846499|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to MN693738 (Marine virus AFVG_250M1148, complete genome) position: , mismatch: 8, identity: 0.75

gatattaccagtaagctcaaaaaatgtagcaa	CRISPR spacer
cacactacaagtaagctcaacaaatgtagttc	Protospacer
 *.*.*** *********** ********.

76. spacer 2.4|846621|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to MG250483 (Aeromonas phage Ah1, complete genome) position: , mismatch: 8, identity: 0.75

aaatctatcaagtggaagtctcagcggatctg-----	CRISPR spacer
aaaactatcaagtggaaggctc-----atttgtaatc	Protospacer
*** ************** ***     **.**

77. spacer 2.13|847170|32|CP024871|CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 8, identity: 0.75

taggctatagctataacatttattgccatagc	CRISPR spacer
taggcgatagctataacaattatcagctttga	Protospacer
***** ************ ****.. * * *

78. spacer 2.13|847170|32|CP024871|CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 8, identity: 0.75

taggctatagctataacatttattgccatagc	CRISPR spacer
taggcgatagctataacaattatcagctttga	Protospacer
***** ************ ****.. * * *

79. spacer 4.2|2768781|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to KU599879 (Flavobacterium phage Fpv3, complete genome) position: , mismatch: 8, identity: 0.75

aaacacatttgctttttgtgaatcattaataa	CRISPR spacer
ataaatcattgctctttgtaaatcattaatag	Protospacer
* * *.  *****.*****.***********.

80. spacer 4.2|2768781|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to MK764441 (Flavobacterium phage FPSV-F12, complete genome) position: , mismatch: 8, identity: 0.75

aaacacatttgctttttgtgaatcattaataa	CRISPR spacer
ataaatcattgctctttgtaaatcattaatag	Protospacer
* * *.  *****.*****.***********.

81. spacer 4.2|2768781|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to KU599886 (Flavobacterium phage Fpv20, complete genome) position: , mismatch: 8, identity: 0.75

aaacacatttgctttttgtgaatcattaataa	CRISPR spacer
ataaatcattgctctttgtaaatcattaatag	Protospacer
* * *.  *****.*****.***********.

82. spacer 4.2|2768781|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to NC_031931 (Flavobacterium phage Fpv2, complete genome) position: , mismatch: 8, identity: 0.75

aaacacatttgctttttgtgaatcattaataa	CRISPR spacer
ataaatcattgctctttgtaaatcattaatag	Protospacer
* * *.  *****.*****.***********.

83. spacer 4.2|2768781|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to KT876726 (Flavobacterium phage FpV21, complete genome) position: , mismatch: 8, identity: 0.75

aaacacatttgctttttgtgaatcattaataa	CRISPR spacer
ataaatcattgctctttgtaaatcattaatag	Protospacer
* * *.  *****.*****.***********.

84. spacer 4.2|2768781|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to KT876724 (Flavobacterium phage FpV4, complete genome) position: , mismatch: 8, identity: 0.75

aaacacatttgctttttgtgaatcattaataa	CRISPR spacer
ataaatcattgctctttgtaaatcattaatag	Protospacer
* * *.  *****.*****.***********.

85. spacer 4.2|2768781|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to KU599877 (Flavobacterium phage Fpv1, complete genome) position: , mismatch: 8, identity: 0.75

aaacacatttgctttttgtgaatcattaataa	CRISPR spacer
ataaatcattgctctttgtaaatcattaatag	Protospacer
* * *.  *****.*****.***********.

86. spacer 4.2|2768781|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to MK764449 (Flavobacterium phage FPSV-S29, complete genome) position: , mismatch: 8, identity: 0.75

aaacacatttgctttttgtgaatcattaataa	CRISPR spacer
ataaatcattgctctttgtaaatcattaatag	Protospacer
* * *.  *****.*****.***********.

87. spacer 4.3|2768842|31|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022711 (Lactobacillus sakei strain WiKim0063 plasmid pLBS02, complete sequence) position: , mismatch: 8, identity: 0.742

taaaaagttcaatagaagttcaagctcctaa	CRISPR spacer
taaaaagtttattagaagttcaaaaacaaac	Protospacer
*********.* ***********.  *  *

88. spacer 4.3|2768842|31|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP038167 (Enterococcus faecium strain SC3-1 plasmid pSC3-1, complete sequence) position: , mismatch: 8, identity: 0.742

taaaaagttcaatagaagttcaagctcctaa	CRISPR spacer
taaaaagtttattagaagttcaaaagcaaac	Protospacer
*********.* ***********.  *  *

89. spacer 4.3|2768842|31|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP031213 (Lactobacillus brevis strain UCCLB521 plasmid pUCCLB521_E, complete sequence) position: , mismatch: 8, identity: 0.742

taaaaagttcaatagaagttcaagctcctaa-----	CRISPR spacer
taaaaagtttattagaagttcaaa-----aaaaaac	Protospacer
*********.* ***********.     **

90. spacer 4.3|2768842|31|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014879 (Lactobacillus backii strain TMW 1.1989 plasmid pL11989-6, complete sequence) position: , mismatch: 8, identity: 0.742

taaaaagttcaatagaagttcaagctcctaa	CRISPR spacer
taaaaagtttattagaagttcaaaaacaaac	Protospacer
*********.* ***********.  *  *

91. spacer 4.3|2768842|31|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to CP019349 (Lactobacillus plantarum strain KLDS1.0391 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.742

taaaaagttcaatagaagttcaagctcctaa	CRISPR spacer
taaaaagtttattagaagttcaaaaacaaac	Protospacer
*********.* ***********.  *  *

92. spacer 4.3|2768842|31|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP031203 (Lactobacillus brevis strain UCCLBBS449 plasmid pUCCLBBS449_E, complete sequence) position: , mismatch: 8, identity: 0.742

taaaaagttcaatagaagttcaagctcctaa	CRISPR spacer
taaaaagtttattagaagttcaaaaacaaac	Protospacer
*********.* ***********.  *  *

93. spacer 4.3|2768842|31|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP038162 (Enterococcus faecium strain GZ8 plasmid pGZ8, complete sequence) position: , mismatch: 8, identity: 0.742

taaaaagttcaatagaagttcaagctcctaa	CRISPR spacer
taaaaagtttattagaagttcaaaagcaaac	Protospacer
*********.* ***********.  *  *

94. spacer 4.3|2768842|31|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014905 (Lactobacillus backii strain TMW 1.2002 plasmid pL12002-6, complete sequence) position: , mismatch: 8, identity: 0.742

taaaaagttcaatagaagttcaagctcctaa	CRISPR spacer
taaaaagtttattagaagttcaaaaacaaac	Protospacer
*********.* ***********.  *  *

95. spacer 6.3|3090468|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017563 (Paraburkholderia sprentiae WSM5005 plasmid pl1WSM5005, complete sequence) position: , mismatch: 8, identity: 0.75

ttaccgattccacgcccatcagaacggaaggg	CRISPR spacer
attccgattccatgcccatcagcacgtccgcg	Protospacer
 * *********.********* ***   * *

96. spacer 6.8|3090773|31|CP024871|CRISPRCasFinder,CRT matches to NZ_CP045268 (Bacillus megaterium strain FDU301 plasmid pFDU301F, complete sequence) position: , mismatch: 8, identity: 0.742

ataataaaattgataataaagagaaagaaaa	CRISPR spacer
taaataaaattgagaataaagagattgcagg	Protospacer
  *********** **********  * *..

97. spacer 6.8|3090773|31|CP024871|CRISPRCasFinder,CRT matches to NZ_CP031276 (Staphylococcus xylosus strain 2 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.742

ataataaaattgataataaagagaaagaaaa	CRISPR spacer
gtgataaaattgataataaagacaatgcttt	Protospacer
.*.******************* ** *

98. spacer 6.8|3090773|31|CP024871|CRISPRCasFinder,CRT matches to NZ_CP013709 (Clostridium botulinum strain F634 plasmid pRSJ2_2, complete sequence) position: , mismatch: 8, identity: 0.742

ataataaaattgataataaagagaaagaaaa	CRISPR spacer
aatataaaatttgtaataaagagaaacttca	Protospacer
*  ******** .*************    *

99. spacer 6.8|3090773|31|CP024871|CRISPRCasFinder,CRT matches to NZ_CP009921 (Bacillus megaterium NBRC 15308 = ATCC 14581 plasmid pBMV_2, complete sequence) position: , mismatch: 8, identity: 0.742

ataataaaattgataataaagagaaagaaaa	CRISPR spacer
tgagtaaaatagataataaagaggaagcgat	Protospacer
  *.****** ************.*** .*

100. spacer 6.8|3090773|31|CP024871|CRISPRCasFinder,CRT matches to NZ_CP035095 (Bacillus megaterium NBRC 15308 = ATCC 14581 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.742

ataataaaattgataataaagagaaagaaaa	CRISPR spacer
tgagtaaaatagataataaagaggaagcgat	Protospacer
  *.****** ************.*** .*

101. spacer 6.8|3090773|31|CP024871|CRISPRCasFinder,CRT matches to NZ_CP013844 (Clostridium botulinum strain A634 plasmid pRSJ19_2, complete sequence) position: , mismatch: 8, identity: 0.742

ataataaaattgataataaagagaaagaaaa	CRISPR spacer
aatataaaatttgtaataaagagaaacttca	Protospacer
*  ******** .*************    *

102. spacer 6.8|3090773|31|CP024871|CRISPRCasFinder,CRT matches to MK448403 (Streptococcus satellite phage Javan289, complete genome) position: , mismatch: 8, identity: 0.742

ataataaaattgataataaagagaaagaaaa	CRISPR spacer
aaagtaaaattgataatttagagaaagttgg	Protospacer
* *.*************  ********  ..

103. spacer 6.8|3090773|31|CP024871|CRISPRCasFinder,CRT matches to MK448579 (Streptococcus satellite phage Javan619, complete genome) position: , mismatch: 8, identity: 0.742

ataataaaattgataataaagagaaagaaaa	CRISPR spacer
aaagtaaaattgataatttagagaaagttgg	Protospacer
* *.*************  ********  ..

104. spacer 6.8|3090773|31|CP024871|CRISPRCasFinder,CRT matches to LR215723 (Yersinia phage fPS-90 genome assembly, chromosome: I) position: , mismatch: 8, identity: 0.742

ataataaaattgataataaagagaaagaaaa	CRISPR spacer
ataagaaaatttataataaagagcttttaga	Protospacer
**** ****** ***********     *.*

105. spacer 6.8|3090773|31|CP024871|CRISPRCasFinder,CRT matches to MT682714 (Escherichia phage vB_EcoM_Lutter, complete genome) position: , mismatch: 8, identity: 0.742

ataataaaattgataataaagagaaagaaaa	CRISPR spacer
ataagaaaatttataataaagagcttttaga	Protospacer
**** ****** ***********     *.*

106. spacer 6.8|3090773|31|CP024871|CRISPRCasFinder,CRT matches to KU878088 (Bacillus phage AR9, complete genome) position: , mismatch: 8, identity: 0.742

ataataaaattgataataaagagaaagaaaa	CRISPR spacer
atattaatattgataataaagagttttatta	Protospacer
*** *** ***************    *  *

107. spacer 6.8|3090773|31|CP024871|CRISPRCasFinder,CRT matches to LR746311 (Shigella phage vB_SsoM_113 genome assembly, chromosome: 1) position: , mismatch: 8, identity: 0.742

ataataaaattgataataaagagaaagaaaa	CRISPR spacer
ataagaaaatttataataaagagctttcaga	Protospacer
**** ****** ***********     *.*

108. spacer 6.8|3090773|31|CP024871|CRISPRCasFinder,CRT matches to MK373779 (Escherichia phage vB_EcoM_G9062, complete genome) position: , mismatch: 8, identity: 0.742

ataataaaattgataataaagagaaagaaaa	CRISPR spacer
ataagaaaatttataataaagagctttcaga	Protospacer
**** ****** ***********     *.*

109. spacer 6.8|3090773|31|CP024871|CRISPRCasFinder,CRT matches to MN694298 (Marine virus AFVG_250M557, complete genome) position: , mismatch: 8, identity: 0.742

ataataaaattgataataaagagaaagaaaa	CRISPR spacer
aaagaaaaattaataataaaaagaaagattt	Protospacer
* *. ******.********.*******

110. spacer 1.1|574238|32|CP024871|CRISPRCasFinder,CRT matches to HQ259105 (Escherichia phage vB_EcoP_G7C, complete genome) position: , mismatch: 9, identity: 0.719

tggatttactttaacgaaaaaccggttgccga	CRISPR spacer
tggatttactctaacgagaaacctctgctcac	Protospacer
**********.******.*****  *  .*.

111. spacer 1.5|574482|32|CP024871|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025133 (Planococcus sp. MB-3u-03 plasmid unnamed10) position: , mismatch: 9, identity: 0.719

taatcctaatgacaattctttaatagctgtca	CRISPR spacer
taatcctactgacaattcattaattccatctt	Protospacer
******** ********* *****  *  ..

112. spacer 2.1|846438|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to MN694120 (Marine virus AFVG_250M1160, complete genome) position: , mismatch: 9, identity: 0.719

aaagcacaccctttgtatacatgtttttccaa	CRISPR spacer
tctatcaaccttttgtataaatgtttttccaa	Protospacer
   ..  ***.******** ************

113. spacer 2.2|846499|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to MN694424 (Marine virus AFVG_250M468, complete genome) position: , mismatch: 9, identity: 0.719

gatatta--ccagtaagctcaaaaaatgtagcaa	CRISPR spacer
--ttctggctcagtaagctctaaaaatatagcat	Protospacer
  * .*.  .********** ******.*****

114. spacer 2.8|846865|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to MN694346 (Marine virus AFVG_250M477, complete genome) position: , mismatch: 9, identity: 0.719

tcgcaccactgctggaacctgtccatcgccaa	CRISPR spacer
acggaccactgcttgaacctgtccgtttgccg	Protospacer
 ** ********* **********.*.  * .

115. spacer 2.10|846987|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to KP282677 (Sulfolobus monocaudavirus SMV3, complete genome) position: , mismatch: 9, identity: 0.719

tctatgttgacatttttttatctccaattcca	CRISPR spacer
gtggggttgacatttttttatccccacttata	Protospacer
 . . *****************.*** ** .*

116. spacer 2.10|846987|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to AP013483 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G19, isolate: uvMED-CGR-C20A-MedDCM-OCT-S30-C71) position: , mismatch: 9, identity: 0.719

tctatgttgacatttttttatctccaattcca	CRISPR spacer
atttgattgacattgttttatctccaaatctt	Protospacer
 .*  .******** ************ **.

117. spacer 2.10|846987|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to AP013484 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G19, isolate: uvMED-CGR-C20A-MedDCM-OCT-S36-C79) position: , mismatch: 9, identity: 0.719

tctatgttgacatttttttatctccaattcca	CRISPR spacer
atttgattgacattgttttatctccaaatctt	Protospacer
 .*  .******** ************ **.

118. spacer 2.10|846987|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to NC_048016 (Erwinia phage Wellington, complete genome) position: , mismatch: 9, identity: 0.719

tctatgttgacatttttttatctccaattcca	CRISPR spacer
ccagtgttgccattcttttatctccaatgagt	Protospacer
.* .***** ****.*************

119. spacer 2.10|846987|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to NC_019529 (Vibrio phage pVp-1, complete genome) position: , mismatch: 9, identity: 0.719

tctatgttgacatttttttatctccaattcca	CRISPR spacer
tttgatttgacatggttttatctccaattatg	Protospacer
*.*.  *******  ************** ..

120. spacer 2.12|847109|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022999 (Rhizobium sp. 11515TR strain 10195 plasmid p11515TR-A, complete sequence) position: , mismatch: 9, identity: 0.719

tcagtcgggattgttcggatcgaacatacggg	CRISPR spacer
gcagtcgggatcgtccggatcgaagtgatcga	Protospacer
 **********.**.*********   *. *.

121. spacer 4.2|2768781|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to NC_024215 (Lactococcus phage P078, complete genome) position: , mismatch: 9, identity: 0.719

aaacacatttgctttttgtgaatcattaataa	CRISPR spacer
agcagcatatggtttttgtgaatcattaccta	Protospacer
*.  .*** ** **************** . *

122. spacer 4.2|2768781|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to NC_024214 (Lactococcus phage P162, complete genome) position: , mismatch: 9, identity: 0.719

aaacacatttgctttttgtgaatcattaataa	CRISPR spacer
agcagcatatggtttttgtgaatcattaccta	Protospacer
*.  .*** ** **************** . *

123. spacer 4.2|2768781|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to NC_024203 (Lactococcus phage P092, complete genome) position: , mismatch: 9, identity: 0.719

aaacacatttgctttttgtgaatcattaataa	CRISPR spacer
agcagcatatggtttttgtgaatcattaccta	Protospacer
*.  .*** ** **************** . *

124. spacer 4.7|2769085|32|CP024871|CRISPRCasFinder,CRT matches to NZ_CP020333 (Martelella mediterranea DSM 17316 strain MACL11 plasmid pMM170, complete sequence) position: , mismatch: 9, identity: 0.719

ggagagaacgcgtttgaaaaaatcaaacggtc	CRISPR spacer
catgagaacgtgtttgataaaatcaaaatggg	Protospacer
 . *******.****** *********  *

125. spacer 6.5|3090590|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KP453775 (Klebsiella pneumoniae strain ST11 plasmid pKP12226, complete sequence) position: , mismatch: 9, identity: 0.719

tgaggtcgatataaatccaaaagttatcttag-----	CRISPR spacer
gcaggtcgatataaatccagaa-----cttgggcagc	Protospacer
  *****************.**     ***.*

126. spacer 6.5|3090590|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP031917 (Escherichia coli O45:H2 strain FWSEC0003 plasmid unnamed11, complete sequence) position: , mismatch: 9, identity: 0.719

tgaggtcgatataaatccaaaagttatcttag-----	CRISPR spacer
gcaggtcgatataaatccagaa-----cttgggcagc	Protospacer
  *****************.**     ***.*

127. spacer 6.5|3090590|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020522 (Escherichia coli strain 190 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.719

tgaggtcgatataaatccaaaagttatcttag-----	CRISPR spacer
gcaggtcgatataaatccagaa-----cttgggcagc	Protospacer
  *****************.**     ***.*

128. spacer 6.5|3090590|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021729 (Escherichia coli strain Combat11I9 plasmid pCombat11I9-3, complete sequence) position: , mismatch: 9, identity: 0.719

tgaggtcgatataaatccaaaagttatcttag-----	CRISPR spacer
gcaggtcgatataaatccagaa-----cttgggcagc	Protospacer
  *****************.**     ***.*

129. spacer 6.5|3090590|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039843 (Escherichia coli O157:H7 strain USDA5905 plasmid pUSDA5905_1) position: , mismatch: 9, identity: 0.719

tgaggtcgatataaatccaaaagttatcttag-----	CRISPR spacer
gcaggtcgatataaatccagaa-----cttgggcagc	Protospacer
  *****************.**     ***.*

130. spacer 6.5|3090590|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP018804 (Escherichia coli strain E2863 plasmid pE2863-2, complete sequence) position: , mismatch: 9, identity: 0.719

tgaggtcgatataaatccaaaagttatcttag-----	CRISPR spacer
gcaggtcgatataaatccagaa-----cttgggcagc	Protospacer
  *****************.**     ***.*

131. spacer 6.5|3090590|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP018809 (Escherichia coli strain E2865 plasmid pE2865-1, complete sequence) position: , mismatch: 9, identity: 0.719

tgaggtcgatataaatccaaaagttatcttag-----	CRISPR spacer
gcaggtcgatataaatccagaa-----cttgggcagc	Protospacer
  *****************.**     ***.*

132. spacer 6.5|3090590|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015837 (Escherichia coli strain MS6198 plasmid pMS6198C, complete sequence) position: , mismatch: 9, identity: 0.719

tgaggtcgatataaatccaaaagttatcttag-----	CRISPR spacer
gcaggtcgatataaatccagaa-----cttgggcagc	Protospacer
  *****************.**     ***.*

133. spacer 6.5|3090590|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033848 (Escherichia coli strain FDAARGOS_497 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

tgaggtcgatataaatccaaaagttatcttag-----	CRISPR spacer
gcaggtcgatataaatccagaa-----cttgggcagc	Protospacer
  *****************.**     ***.*

134. spacer 6.5|3090590|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MH580301 (Escherichia coli strain 1107 plasmid p1107-99K, complete sequence) position: , mismatch: 9, identity: 0.719

tgaggtcgatataaatccaaaagttatcttag-----	CRISPR spacer
gcaggtcgatataaatccagaa-----cttgggcagc	Protospacer
  *****************.**     ***.*

135. spacer 6.5|3090590|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020434 (Bacillus sp. FDAARGOS_235 plasmid 1, complete sequence) position: , mismatch: 9, identity: 0.719

tgaggtcgatataaatccaaaagttatcttag	CRISPR spacer
ggctttacttaaaaatccaaaagtaatcttag	Protospacer
 *   *   ** ************ *******

136. spacer 6.6|3090651|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP047653 (Bombella sp. KACC 21507 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

-acacctgaaataatttttcttggctggaagac	CRISPR spacer
tatagtc-aaattatttttcttgtctggaagct	Protospacer
 *.* .. **** ********** ******* .

137. spacer 6.8|3090773|31|CP024871|CRISPRCasFinder,CRT matches to NZ_CP013844 (Clostridium botulinum strain A634 plasmid pRSJ19_2, complete sequence) position: , mismatch: 9, identity: 0.71

ataataaaattgataataaagagaaagaaaa	CRISPR spacer
ataataaaattaataatacagagttaacggg	Protospacer
***********.****** ****  *. ...

138. spacer 1.4|574421|32|CP024871|CRISPRCasFinder,CRT,PILER-CR matches to MN694124 (Marine virus AFVG_250M1008, complete genome) position: , mismatch: 10, identity: 0.688

ttattagttcaggaactgcgtttataaacaaa	CRISPR spacer
gcagggcatcaggaactgcgtatataaaaaat	Protospacer
 .*  .  ************* ****** **

139. spacer 1.6|574543|32|CP024871|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013486 (Vibrio alginolyticus strain ATCC 33787 plasmid pMBL128, complete sequence) position: , mismatch: 10, identity: 0.688

tcctctacctgctcaggagtgtagccctcgcc	CRISPR spacer
cctactacctgctcaagagagtagcccattgt	Protospacer
.*. ***********.*** ******* .  .

140. spacer 2.2|846499|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024332 (Borrelia miyamotoi strain Yekat-6 plasmid pYkt6-lp6, complete sequence) position: , mismatch: 10, identity: 0.688

gatattaccagtaagctcaaaaaatgtagcaa	CRISPR spacer
tataataacagtaagctcaaaaaaaatcaagt	Protospacer
 *** ** **************** .* . .

141. spacer 2.2|846499|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KT355574 (Borrelia miyamotoi LB-2001 plasmid cpD, complete sequence) position: , mismatch: 10, identity: 0.688

gatattaccagtaagctcaaaaaatgtagcaa	CRISPR spacer
tataataacagtaagctcaaaaaaaatcaagt	Protospacer
 *** ** **************** .* . .

142. spacer 2.2|846499|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024407 (Borrelia miyamotoi strain Izh-4 plasmid pIzh4-lp6, complete sequence) position: , mismatch: 10, identity: 0.688

gatattaccagtaagctcaaaaaatgtagcaa	CRISPR spacer
tataataacagtaagctcaaaaaaaatcaagt	Protospacer
 *** ** **************** .* . .

143. spacer 2.2|846499|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024222 (Borrelia miyamotoi strain Izh-5 plasmid pIzh5-lp6, complete sequence) position: , mismatch: 10, identity: 0.688

gatattaccagtaagctcaaaaaatgtagcaa	CRISPR spacer
tataataacagtaagctcaaaaaaaatcaagt	Protospacer
 *** ** **************** .* . .

144. spacer 2.2|846499|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024350 (Borrelia miyamotoi strain Yekat-1 plasmid pYkt1-lp6, complete sequence) position: , mismatch: 10, identity: 0.688

gatattaccagtaagctcaaaaaatgtagcaa	CRISPR spacer
tataataacagtaagctcaaaaaaaatcaagt	Protospacer
 *** ** **************** .* . .

145. spacer 2.2|846499|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024370 (Borrelia miyamotoi strain Izh-16 plasmid pIzh16-lp6, complete sequence) position: , mismatch: 10, identity: 0.688

gatattaccagtaagctcaaaaaatgtagcaa	CRISPR spacer
tataataacagtaagctcaaaaaaaatcaagt	Protospacer
 *** ** **************** .* . .

146. spacer 2.2|846499|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024389 (Borrelia miyamotoi strain Izh-14 plasmid pIzh14-lp6-1, complete sequence) position: , mismatch: 10, identity: 0.688

gatattaccagtaagctcaaaaaatgtagcaa	CRISPR spacer
tataataacagtaagctcaaaaaaaatcaagt	Protospacer
 *** ** **************** .* . .

147. spacer 2.3|846560|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to NC_017284 (Campylobacter jejuni subsp. jejuni IA3902 plasmid pVir, complete sequence) position: , mismatch: 10, identity: 0.688

cgacttgagcgtctttttctttattccaccat	CRISPR spacer
tttctttagcgtctttttctgtattcattcta	Protospacer
.  *** ************* *****  .*

148. spacer 2.3|846560|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014746 (Campylobacter jejuni strain OD267 plasmid pCJDM67 S, complete sequence) position: , mismatch: 10, identity: 0.688

cgacttgagcgtctttttctttattccaccat	CRISPR spacer
tttctttagcgtctttttctgtattcattcta	Protospacer
.  *** ************* *****  .*

149. spacer 2.3|846560|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007184 (Campylobacter coli RM1875 plasmid pRM1875_35kb, complete sequence) position: , mismatch: 10, identity: 0.688

cgacttgagcgtctttttctttattccaccat	CRISPR spacer
tttctttagcgtctttttctgtattcattcta	Protospacer
.  *** ************* *****  .*

150. spacer 2.3|846560|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to NC_008770 (Campylobacter jejuni subsp. jejuni 81-176 plasmid pVir, complete sequence) position: , mismatch: 10, identity: 0.688

cgacttgagcgtctttttctttattccaccat	CRISPR spacer
tttctttagcgtctttttctgtattcattcta	Protospacer
.  *** ************* *****  .*

151. spacer 2.3|846560|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010074 (Campylobacter jejuni subsp. jejuni strain 01-1512 plasmid pCj2, complete sequence) position: , mismatch: 10, identity: 0.688

cgacttgagcgtctttttctttattccaccat	CRISPR spacer
tttctttagcgtctttttctgtattcattcta	Protospacer
.  *** ************* *****  .*

152. spacer 2.3|846560|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP038864 (Campylobacter jejuni strain SCJK2 plasmid p2, complete sequence) position: , mismatch: 10, identity: 0.688

cgacttgagcgtctttttctttattccaccat	CRISPR spacer
tttctttagcgtctttttctgtattcattcta	Protospacer
.  *** ************* *****  .*

153. spacer 2.3|846560|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to CP013734 (Campylobacter coli strain OR12 plasmid pOR12Vir, complete sequence) position: , mismatch: 10, identity: 0.688

cgacttgagcgtctttttctttattccaccat	CRISPR spacer
tttctttagcgtctttttctgtattcattcta	Protospacer
.  *** ************* *****  .*

154. spacer 2.4|846621|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to MT114163 (Mycobacterium phage Settecandela, complete genome) position: , mismatch: 10, identity: 0.688

aaatctatcaagtggaagtctcagcggatctg	CRISPR spacer
cgcttcatcaagtggaagtttcggcggatgaa	Protospacer
 . *..*************.**.******  .

155. spacer 2.4|846621|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to MK937592 (Mycobacterium phage Phrappuccino, complete genome) position: , mismatch: 10, identity: 0.688

aaatctatcaagtggaagtctcagcggatctg	CRISPR spacer
cgcttcatcaagtggaagtttcggcggatgaa	Protospacer
 . *..*************.**.******  .

156. spacer 2.7|846804|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR134416 (Legionella adelaidensis strain NCTC12735 genome assembly, plasmid: 7) position: , mismatch: 10, identity: 0.688

tcccgccggtttaattcatcaaacattcacat	CRISPR spacer
attggagggattaattcatcaaatattcacga	Protospacer
 .. *  ** *************.******.

157. spacer 2.7|846804|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to MW057857 (Providencia phage PSTCR5, complete genome) position: , mismatch: 10, identity: 0.688

tcccgccggtttaattcatcaaacattcacat	CRISPR spacer
ataagggattttaaatcatcaaacattcccat	Protospacer
 .  *  . ***** ************* ***

158. spacer 2.7|846804|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to KY363465 (Providencia phage vB_PreS_PR1, complete genome) position: , mismatch: 10, identity: 0.688

tcccgccggtttaattcatcaaacattcacat	CRISPR spacer
ataagggattttaaatcatcaaacattcccat	Protospacer
 .  *  . ***** ************* ***

159. spacer 2.13|847170|32|CP024871|CRISPRCasFinder,CRT matches to MH542234 (Staphylococcus phage Terranova, complete genome) position: , mismatch: 10, identity: 0.688

taggctatagctataacatttattgccatagc	CRISPR spacer
ttggctataggtataatatttattgtaggttt	Protospacer
* ******** *****.********. .   .

160. spacer 2.13|847170|32|CP024871|CRISPRCasFinder,CRT matches to NC_041928 (Staphylococcus phage phiIBB-SEP1, complete genome) position: , mismatch: 10, identity: 0.688

taggctatagctataacatttattgccatagc	CRISPR spacer
ttggctataggtataatatttattgtaggttt	Protospacer
* ******** *****.********. .   .

161. spacer 2.13|847170|32|CP024871|CRISPRCasFinder,CRT matches to MF417868 (Uncultured Caudovirales phage clone 7AX_1, partial genome) position: , mismatch: 10, identity: 0.688

taggctatagctataacatttattgccatagc	CRISPR spacer
ttggctataggtataatatttattgtaggttt	Protospacer
* ******** *****.********. .   .

162. spacer 2.13|847170|32|CP024871|CRISPRCasFinder,CRT matches to KP027447 (Staphylococcus phage phiIPLA-C1C, complete genome) position: , mismatch: 10, identity: 0.688

taggctatagctataacatttattgccatagc	CRISPR spacer
ttggctataggtataatatttattgtaggttt	Protospacer
* ******** *****.********. .   .

163. spacer 2.13|847170|32|CP024871|CRISPRCasFinder,CRT matches to MH321490 (Staphylococcus phage Quidividi, complete genome) position: , mismatch: 10, identity: 0.688

taggctatagctataacatttattgccatagc	CRISPR spacer
ttggctataggtataatatttattgtaggttt	Protospacer
* ******** *****.********. .   .

164. spacer 2.13|847170|32|CP024871|CRISPRCasFinder,CRT matches to MH321491 (Staphylococcus phage Twillingate, complete genome) position: , mismatch: 10, identity: 0.688

taggctatagctataacatttattgccatagc	CRISPR spacer
ttggctataggtataatatttattgtaggttt	Protospacer
* ******** *****.********. .   .

165. spacer 4.2|2768781|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032528 (Bacillus megaterium NCT-2 plasmid pNCT2_1, complete sequence) position: , mismatch: 10, identity: 0.688

aaacacatttgctttttgtgaatcattaataa	CRISPR spacer
ctcttcatttgttttctgtgaatcattatttt	Protospacer
   . ******.***.************ *

166. spacer 4.2|2768781|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to AP014414 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C24-MedDCM-OCT-S26-C171, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces) position: , mismatch: 10, identity: 0.688

aaacacatttgctttttgtgaatcattaataa	CRISPR spacer
tttaatatttgctttttgtgaaaaattaaatc	Protospacer
    *.****************  *****

167. spacer 4.6|2769024|32|CP024871|CRISPRCasFinder,CRT matches to NZ_CP034911 (Ensifer alkalisoli strain YIC4027 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

aatctcgatctgttcctcacggttcggtgtgt	CRISPR spacer
ctgacgggtctgttcctcacggtgctgtgtga	Protospacer
    . *.*************** * *****

168. spacer 4.6|2769024|32|CP024871|CRISPRCasFinder,CRT matches to LN997845 (Streptomyces reticuli genome assembly TUE45, plasmid : IV) position: , mismatch: 10, identity: 0.688

aatctcgatctgttcctcacggttcggtgtgt	CRISPR spacer
gtgctcgatcaggtcctcacggttcgcccact	Protospacer
.  ******* * ************* .   *

169. spacer 4.9|2769207|32|CP024871|CRISPRCasFinder,CRT matches to NC_007974 (Cupriavidus metallidurans CH34 megaplasmid, complete sequence) position: , mismatch: 10, identity: 0.688

ttttagtgtcgaacgtcgggccactcggccca	CRISPR spacer
cgcatgtggcgaacgtcgcgccactcggacgc	Protospacer
. .  *** ********* ********* *

170. spacer 4.9|2769207|32|CP024871|CRISPRCasFinder,CRT matches to NZ_CP046333 (Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed3) position: , mismatch: 10, identity: 0.688

ttttagtgtcgaacgtcgggccactcggccca	CRISPR spacer
cgcatgtggcgaacgtcgcgccactcggacgc	Protospacer
. .  *** ********* ********* *

171. spacer 6.5|3090590|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to NC_017296 (Clostridium acetobutylicum EA 2018 plasmid pEA2018, complete sequence) position: , mismatch: 10, identity: 0.688

tgaggtcgatataaatccaaaagttatcttag	CRISPR spacer
ctcaaacaatataaacccaaaagttatattaa	Protospacer
.  .. *.*******.*********** ***.

172. spacer 6.5|3090590|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to NC_015686 (Clostridium acetobutylicum DSM 1731 plasmid pSMBa, complete sequence) position: , mismatch: 10, identity: 0.688

tgaggtcgatataaatccaaaagttatcttag	CRISPR spacer
ctcaaacaatataaacccaaaagttatattaa	Protospacer
.  .. *.*******.*********** ***.

173. spacer 6.5|3090590|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to NC_001988 (Clostridium acetobutylicum ATCC 824 plasmid pSOL1, complete sequence) position: , mismatch: 10, identity: 0.688

tgaggtcgatataaatccaaaagttatcttag	CRISPR spacer
ctcaaacaatataaacccaaaagttatattaa	Protospacer
.  .. *.*******.*********** ***.

174. spacer 6.8|3090773|31|CP024871|CRISPRCasFinder,CRT matches to CP016195 (Bacillus thuringiensis serovar coreanensis strain ST7 plasmid pST7-1, complete sequence) position: , mismatch: 10, identity: 0.677

ataataaaattgataataaagagaaagaaaa	CRISPR spacer
tgtttaaaaatgataataaagtgaaagggtg	Protospacer
    ***** *********** *****.. .

175. spacer 6.8|3090773|31|CP024871|CRISPRCasFinder,CRT matches to MH542234 (Staphylococcus phage Terranova, complete genome) position: , mismatch: 10, identity: 0.677

ataataaaattgataataaagagaaagaaaa	CRISPR spacer
tatataatattgataataaagaaaaaccttt	Protospacer
   **** **************.***

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

252690 : 331334

uncultured_Caudovirales_phage(20.0%)

transposase,holin,tRNA,bacteriocin

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZQ00884.1\|252690_253347_-\|bacteriocin	bacteriocin-protection protein	NA	NA	NA	NA
AZQ00885.1\|253525_254620_+\|transposase	IS110 family transposase	NA	NA	NA	NA
AZQ00886.1\|255235_256567_+	MFS transporter	NA	NA	NA	NA
AZQ00887.1\|256698_257235_+	inorganic pyrophosphatase	A0A2H4J8U1	uncultured_Caudovirales_phage	4.4e-21	37.9
AZQ00888.1\|257624_257942_-	hypothetical protein	NA	NA	NA	NA
AZQ00889.1\|259507_259906_+	transcriptional regulator	NA	NA	NA	NA
AZQ00890.1\|260897_261800_-	lauroyl acyltransferase	NA	NA	NA	NA
AZQ00891.1\|261813_262014_-	hypothetical protein	NA	NA	NA	NA
AZQ00892.1\|262256_262481_-	hypothetical protein	NA	NA	NA	NA
AZQ00893.1\|262693_263419_+	7-carboxy-7-deazaguanine synthase	M1PXL8	Cellulophaga_phage	6.7e-12	28.1
AZQ00894.1\|263419_266269_+	RNA helicase	A0A2H4J643	uncultured_Caudovirales_phage	7.0e-65	33.5
AZQ00895.1\|266348_268757_+\|tRNA	phenylalanine--tRNA ligase subunit beta	NA	NA	NA	NA
AZQ03622.1\|268913_269216_-	hypothetical protein	NA	NA	NA	NA
AZQ00896.1\|269194_269764_+	gamma carbonic anhydrase family protein	NA	NA	NA	NA
AZQ00897.1\|270026_270506_-	hypothetical protein	NA	NA	NA	NA
AZQ00898.1\|270567_271206_-	hypothetical protein	NA	NA	NA	NA
AZQ00899.1\|271396_271975_-	cytochrome C oxidase subunit IV	NA	NA	NA	NA
AZQ00900.1\|272064_273330_-	hypothetical protein	NA	NA	NA	NA
AZQ03623.1\|273374_274169_+	hypothetical protein	NA	NA	NA	NA
AZQ00901.1\|274297_274507_-	hypothetical protein	NA	NA	NA	NA
AZQ00902.1\|274951_276352_-	MFS transporter	NA	NA	NA	NA
AZQ03624.1\|276489_276675_+	(2Fe-2S)-binding protein	NA	NA	NA	NA
AZQ00903.1\|276671_277334_+	pyrimidine reductase	A0A1V0SE20	Indivirus	5.0e-06	23.5
AZQ00904.1\|277351_277984_+	penicillin-binding protein	NA	NA	NA	NA
AZQ00905.1\|278178_280779_+	histidine kinase	NA	NA	NA	NA
AZQ03625.1\|281702_282758_+	2-dehydropantoate 2-reductase	NA	NA	NA	NA
AZQ00906.1\|282754_283369_-	DUF2062 domain-containing protein	NA	NA	NA	NA
AZQ00907.1\|283377_284169_-	tetratricopeptide repeat protein	NA	NA	NA	NA
AZQ00908.1\|284931_287031_+	serine/threonine protein phosphatase	NA	NA	NA	NA
AZQ00909.1\|287027_287444_-	dehydratase	NA	NA	NA	NA
AZQ00910.1\|287446_287899_-	MaoC family dehydratase	NA	NA	NA	NA
AZQ00911.1\|288014_288959_-	alpha/beta hydrolase	NA	NA	NA	NA
AZQ00912.1\|288944_291443_+	sulfatase	NA	NA	NA	NA
AZQ00913.1\|291458_291857_+	DUF3052 domain-containing protein	NA	NA	NA	NA
AZQ00914.1\|292168_292969_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA
AZQ00915.1\|293105_294224_-	PAS domain-containing sensor histidine kinase	W8CYF6	Bacillus_phage	2.3e-19	28.0
AZQ00916.1\|295001_295403_-\|transposase	DDE transposase	NA	NA	NA	NA
AZQ00917.1\|295276_295795_-\|transposase	IS5/IS1182 family transposase	A0A0N9SHJ4	Paenibacillus_phage	1.3e-14	40.7
AZQ00918.1\|296104_299425_-	AcrB/AcrD/AcrF family protein	S5VL66	Leptospira_phage	3.4e-18	20.4
AZQ00919.1\|299772_300882_-	DegT/DnrJ/EryC1/StrS aminotransferase family protein	NA	NA	NA	NA
AZQ00920.1\|300950_301130_+	hypothetical protein	NA	NA	NA	NA
AZQ00921.1\|301300_302266_-	3-beta hydroxysteroid dehydrogenase	A0A220T6L0	Eptesipox_virus	1.2e-13	22.3
AZQ00922.1\|302329_302917_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AZQ00923.1\|303085_306238_+	AcrB/AcrD/AcrF family protein	S5VTK5	Leptospira_phage	4.1e-98	25.9
AZQ00924.1\|306427_307981_+	TolC family protein	NA	NA	NA	NA
AZQ00925.1\|308053_309814_+	acyl-CoA dehydrogenase	NA	NA	NA	NA
AZQ00926.1\|309924_310149_-	hypothetical protein	NA	NA	NA	NA
AZQ00927.1\|310170_310611_-	N-acetyltransferase	NA	NA	NA	NA
AZQ00928.1\|311474_311669_-	hypothetical protein	NA	NA	NA	NA
AZQ00929.1\|311701_312118_-	hypothetical protein	NA	NA	NA	NA
AZQ00930.1\|312147_312942_-	ArsR family transcriptional regulator	NA	NA	NA	NA
AZQ00931.1\|313555_314818_-	hypothetical protein	NA	NA	NA	NA
AZQ00932.1\|314951_316649_+	B12-binding domain-containing radical SAM protein	NA	NA	NA	NA
AZQ00933.1\|316959_318063_+	fatty acid desaturase	NA	NA	NA	NA
AZQ00934.1\|318334_320794_-	hybrid sensor histidine kinase/response regulator	A0A1V0SGX0	Hokovirus	4.4e-55	33.7
AZQ00935.1\|321228_322302_-	ribosome small subunit-dependent GTPase A	NA	NA	NA	NA
AZQ00936.1\|322548_325962_+\|holin	choline dehydrogenase	NA	NA	NA	NA
AZQ00937.1\|326010_327579_+	GMC family oxidoreductase	NA	NA	NA	NA
AZQ00938.1\|327739_328450_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
AZQ00939.1\|330239_331334_-\|transposase	IS110 family transposase	NA	NA	NA	NA

DBSCAN-SWA_2

355943 : 413243

Paenibacillus_phage(42.86%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZQ00956.1\|355943_356345_-\|transposase	DDE transposase	NA	NA	NA	NA
AZQ00957.1\|356218_356737_-\|transposase	IS5/IS1182 family transposase	A0A0N9SHJ4	Paenibacillus_phage	1.3e-14	40.7
AZQ00958.1\|357001_357661_-	hypothetical protein	NA	NA	NA	NA
AZQ00959.1\|357696_358146_-	MarR family transcriptional regulator	NA	NA	NA	NA
AZQ00960.1\|358513_358696_-	hypothetical protein	NA	NA	NA	NA
AZQ00961.1\|358731_360111_+	histidine kinase	NA	NA	NA	NA
AZQ03628.1\|360232_360445_-	hypothetical protein	NA	NA	NA	NA
AZQ00962.1\|360557_361385_+	enoyl-CoA hydratase	NA	NA	NA	NA
AZQ03629.1\|361393_361573_-	hypothetical protein	NA	NA	NA	NA
AZQ00963.1\|361686_362535_+	hypothetical protein	NA	NA	NA	NA
AZQ00964.1\|363175_365056_+	sphingomyelin phosphodiesterase	A0A1P8L6H7	Staphylococcus_phage	1.0e-64	46.5
AZQ00965.1\|365237_366203_-	hypothetical protein	NA	NA	NA	NA
AZQ00966.1\|366199_367555_-	transcriptional regulator	NA	NA	NA	NA
AZQ00967.1\|367557_368082_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
AZQ00968.1\|368357_369563_-	hypothetical protein	NA	NA	NA	NA
AZQ00969.1\|370086_370605_+\|transposase	IS5/IS1182 family transposase	A0A0N9SHJ4	Paenibacillus_phage	1.3e-14	40.7
AZQ00970.1\|370478_370880_+\|transposase	DDE transposase	NA	NA	NA	NA
AZQ00971.1\|371043_372906_-	ATP-dependent DNA helicase RecQ	F2NZ48	Diadromus_pulchellus_ascovirus	1.9e-71	39.3
AZQ00972.1\|373088_375041_-\|tRNA	bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC	NA	NA	NA	NA
AZQ00973.1\|375040_376060_-	hypothetical protein	NA	NA	NA	NA
AZQ00974.1\|376169_377234_+\|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	NA	NA	NA	NA
AZQ00975.1\|377433_377658_+	hypothetical protein	NA	NA	NA	NA
AZQ00976.1\|383082_385869_+	restriction endonuclease subunit R	NA	NA	NA	NA
AZQ00977.1\|385998_387000_+	ATP-binding protein	NA	NA	NA	NA
AZQ00978.1\|387003_388863_+	peptidase S8	NA	NA	NA	NA
AZQ00979.1\|388850_389495_+	hypothetical protein	NA	NA	NA	NA
AZQ00980.1\|389638_391816_+	type I restriction endonuclease subunit S	NA	NA	NA	NA
AZQ00981.1\|391812_393309_+	SAM-dependent DNA methyltransferase	NA	NA	NA	NA
AZQ00982.1\|393401_393890_+	DUF1016 domain-containing protein	NA	NA	NA	NA
AZQ00983.1\|394974_395376_-\|transposase	DDE transposase	NA	NA	NA	NA
AZQ00984.1\|395249_395768_-\|transposase	IS5/IS1182 family transposase	A0A0N9SHJ4	Paenibacillus_phage	1.3e-14	40.7
AZQ03630.1\|397071_402288_-	serine/threonine protein kinase	A0A2H4UW49	Bodo_saltans_virus	3.1e-10	28.8
AZQ00985.1\|402347_404420_-	hypothetical protein	NA	NA	NA	NA
AZQ00986.1\|404562_405486_-	hypothetical protein	NA	NA	NA	NA
AZQ00987.1\|406313_407417_-	hypothetical protein	NA	NA	NA	NA
AZQ00988.1\|407418_408300_-	sulfatase	A0A1B1IUU3	uncultured_Mediterranean_phage	6.4e-09	29.3
AZQ00989.1\|408449_409976_+	peptidase M14	NA	NA	NA	NA
AZQ00990.1\|409975_410878_+	EamA/RhaT family transporter	NA	NA	NA	NA
AZQ00991.1\|412148_413243_-\|transposase	IS110 family transposase	NA	NA	NA	NA

DBSCAN-SWA_3

1049090 : 1135162

Leptospira_phage(66.67%)

protease,transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZQ01458.1\|1049090_1050185_+\|transposase	IS110 family transposase	NA	NA	NA	NA
AZQ01459.1\|1051073_1052303_-\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	7.7e-53	49.7
AZQ03694.1\|1052632_1053484_+	hypothetical protein	NA	NA	NA	NA
AZQ01460.1\|1054115_1056248_+	TonB-dependent receptor	NA	NA	NA	NA
AZQ01461.1\|1056249_1057413_+	hypothetical protein	NA	NA	NA	NA
AZQ01462.1\|1057671_1058331_+	hypothetical protein	NA	NA	NA	NA
AZQ01463.1\|1058618_1059179_-	DUF1564 domain-containing protein	NA	NA	NA	NA
AZQ01464.1\|1061715_1062153_-	dUTP diphosphatase	V9SFR6	Tunisvirus	3.6e-29	47.8
AZQ01465.1\|1062432_1063827_-\|tRNA	glycine--tRNA ligase	A0A2I2L3K8	Orpheovirus	8.2e-51	30.4
AZQ01466.1\|1063940_1065623_+	energy transducer TonB	NA	NA	NA	NA
AZQ01467.1\|1065619_1066378_+\|protease	PrsW family intramembrane metalloprotease	NA	NA	NA	NA
AZQ01468.1\|1066386_1067289_+	50S ribosomal protein L11 methyltransferase	NA	NA	NA	NA
AZQ01469.1\|1067293_1068280_+	adenosine kinase	NA	NA	NA	NA
AZQ01470.1\|1068690_1069269_-	hypothetical protein	NA	NA	NA	NA
AZQ01471.1\|1069282_1072216_-	transporter	NA	NA	NA	NA
AZQ01472.1\|1072222_1072843_-	toluene tolerance protein	NA	NA	NA	NA
AZQ01473.1\|1073191_1073899_-	DUF1554 domain-containing protein	NA	NA	NA	NA
AZQ01474.1\|1074328_1076119_+	DNA mismatch repair protein MutL	A0A1B2LRQ5	Wolbachia_phage	5.7e-73	32.6
AZQ01475.1\|1076087_1076708_+	DedA family protein	NA	NA	NA	NA
AZQ01476.1\|1077022_1077955_-	hypothetical protein	S5W9G5	Leptospira_phage	8.3e-07	54.1
AZQ01477.1\|1078055_1079252_-	hypothetical protein	S5WIX4	Leptospira_phage	2.1e-07	55.9
AZQ01478.1\|1079491_1080229_-	hypothetical protein	S5WIU1	Leptospira_phage	4.9e-111	82.2
AZQ01479.1\|1080300_1080603_-	hypothetical protein	S5WIS5	Leptospira_phage	3.7e-09	80.5
AZQ01480.1\|1082486_1084238_-	hypothetical protein	S5WIX4	Leptospira_phage	7.0e-07	61.2
AZQ01481.1\|1084234_1084459_-	hypothetical protein	NA	NA	NA	NA
AZQ01482.1\|1084461_1084698_+	hypothetical protein	NA	NA	NA	NA
AZQ01483.1\|1084694_1085966_+	replication-associated recombination protein A	G3MBE0	Bacillus_virus	5.5e-70	39.8
AZQ01484.1\|1086594_1087698_-	histidinol-phosphate transaminase	A0A0H3TLT9	Faustovirus	7.2e-18	28.3
AZQ01485.1\|1087847_1088018_+	hypothetical protein	NA	NA	NA	NA
AZQ01486.1\|1088205_1088388_+	hypothetical protein	NA	NA	NA	NA
AZQ01487.1\|1088466_1089462_-	nuclease	A0A1W6JQ32	Staphylococcus_phage	2.5e-09	38.2
AZQ01488.1\|1089630_1090266_-	hypothetical protein	NA	NA	NA	NA
AZQ03696.1\|1090475_1090979_+	hypothetical protein	NA	NA	NA	NA
AZQ03695.1\|1091026_1091755_+\|transposase	transposase	NA	NA	NA	NA
AZQ01489.1\|1093890_1094097_-	hypothetical protein	NA	NA	NA	NA
AZQ01490.1\|1094093_1094639_-	hypothetical protein	NA	NA	NA	NA
AZQ03697.1\|1094649_1095846_-	hypothetical protein	S5VY01	Leptospira_phage	1.1e-19	38.5
AZQ01491.1\|1096400_1096583_-	hypothetical protein	NA	NA	NA	NA
AZQ01492.1\|1096589_1097075_-	hypothetical protein	NA	NA	NA	NA
AZQ01493.1\|1097093_1097909_-	hypothetical protein	S5VY01	Leptospira_phage	5.2e-05	36.0
AZQ01494.1\|1098222_1098759_-	hypothetical protein	NA	NA	NA	NA
AZQ03698.1\|1098769_1101952_-	peptidase M23	S5VY01	Leptospira_phage	2.1e-179	51.1
AZQ01495.1\|1102946_1103462_-	hypothetical protein	S5VY79	Leptospira_phage	8.2e-65	77.2
AZQ03699.1\|1103467_1105858_-	peptidase M23	S5VY01	Leptospira_phage	2.3e-154	57.7
AZQ01496.1\|1107587_1108043_-	hypothetical protein	NA	NA	NA	NA
AZQ03700.1\|1108058_1109696_-	acetyltransferase	S5VY01	Leptospira_phage	9.2e-118	52.8
AZQ01497.1\|1109917_1110403_-	hypothetical protein	NA	NA	NA	NA
AZQ01498.1\|1110421_1111249_-	hypothetical protein	S5VY01	Leptospira_phage	4.0e-05	36.0
AZQ01499.1\|1111627_1112173_-	hypothetical protein	NA	NA	NA	NA
AZQ03701.1\|1112183_1115378_-	peptidase M23	S5VY01	Leptospira_phage	2.6e-185	58.2
AZQ01500.1\|1116442_1116988_-	hypothetical protein	NA	NA	NA	NA
AZQ01501.1\|1124432_1125818_+\|transposase	transposase	NA	NA	NA	NA
AZQ01502.1\|1125865_1126108_-	hypothetical protein	NA	NA	NA	NA
AZQ01503.1\|1126092_1126305_-	hypothetical protein	NA	NA	NA	NA
AZQ01504.1\|1126288_1126822_-	hypothetical protein	NA	NA	NA	NA
AZQ03702.1\|1126821_1132509_-	hypothetical protein	S5VY01	Leptospira_phage	0.0e+00	66.8
AZQ01505.1\|1133776_1135162_+\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_4

1174887 : 1187486

Leptospira_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZQ01534.1\|1174887_1176198_-	chromosome partitioning protein ParB	S5VKH6	Leptospira_phage	2.3e-39	68.1
AZQ01535.1\|1176194_1177016_-	ParA family protein	Q9G093	Leptospira_phage	1.7e-11	27.7
AZQ01536.1\|1177215_1178280_-	recombinase XerC	A0A0K2CP59	Brevibacillus_phage	5.0e-16	25.5
AZQ01537.1\|1178642_1181603_-	DNA primase	A0A1S5RF71	Helicobacter_phage	4.8e-24	25.4
AZQ01538.1\|1181760_1182141_+	XRE family transcriptional regulator	A0A288WGH2	Bacillus_phage	6.1e-09	35.8
AZQ01539.1\|1182165_1182375_+	XRE family transcriptional regulator	NA	NA	NA	NA
AZQ01540.1\|1182678_1182870_-	hypothetical protein	NA	NA	NA	NA
AZQ01541.1\|1182968_1183178_-	hypothetical protein	NA	NA	NA	NA
AZQ01542.1\|1183352_1183925_-	hypothetical protein	NA	NA	NA	NA
AZQ03708.1\|1183949_1187486_-	hypothetical protein	S5VY01	Leptospira_phage	5.3e-195	62.3

DBSCAN-SWA_5

1968161 : 1991775

uncultured_virus(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZQ02147.1\|1968161_1968969_+\|transposase	IS5/IS1182 family transposase	NA	NA	NA	NA
AZQ02148.1\|1969126_1969864_-	hypothetical protein	S5WIU1	Leptospira_phage	4.9e-111	82.2
AZQ02149.1\|1969935_1970238_-	hypothetical protein	S5WIS5	Leptospira_phage	3.7e-09	80.5
AZQ02150.1\|1973372_1973933_+	DUF1564 domain-containing protein	NA	NA	NA	NA
AZQ02151.1\|1974551_1975535_-	hypothetical protein	NA	NA	NA	NA
AZQ02152.1\|1975544_1975733_-	hypothetical protein	NA	NA	NA	NA
AZQ02153.1\|1977088_1979167_-	heat-labile enterotoxin subunit alpha	NA	NA	NA	NA
AZQ02154.1\|1979716_1980946_-\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	7.7e-53	49.7
AZQ02155.1\|1981010_1981295_-	hypothetical protein	NA	NA	NA	NA
AZQ02156.1\|1983228_1984455_+\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	3.2e-51	49.4
AZQ02157.1\|1984486_1985716_+\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	7.7e-53	49.7
AZQ02158.1\|1986915_1989327_+	TonB-dependent receptor	NA	NA	NA	NA
AZQ02159.1\|1989356_1989914_+	lipoprotein	NA	NA	NA	NA
AZQ02160.1\|1990213_1990780_+	lipoprotein	NA	NA	NA	NA
AZQ02161.1\|1990981_1991500_+\|transposase	IS5/IS1182 family transposase	A0A0N9SHJ4	Paenibacillus_phage	1.3e-14	40.7
AZQ02162.1\|1991373_1991775_+\|transposase	DDE transposase	NA	NA	NA	NA

DBSCAN-SWA_6

2193218 : 2256652

Paenibacillus_phage(11.11%)

protease,transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZQ02327.1\|2193218_2193737_+\|transposase	IS5/IS1182 family transposase	A0A0N9SHJ4	Paenibacillus_phage	1.3e-14	40.7
AZQ02328.1\|2193610_2194012_+\|transposase	DDE transposase	NA	NA	NA	NA
AZQ02329.1\|2194106_2194625_+	DUF1993 domain-containing protein	NA	NA	NA	NA
AZQ02330.1\|2194621_2195518_+	polysaccharide deacetylase family protein	NA	NA	NA	NA
AZQ02331.1\|2195663_2197802_+	glycosyl transferase	NA	NA	NA	NA
AZQ02332.1\|2197881_2198532_+	hypothetical protein	NA	NA	NA	NA
AZQ02333.1\|2198540_2200028_+\|tRNA	lysine--tRNA ligase	A0A1V0SAC0	Catovirus	4.2e-93	38.4
AZQ02334.1\|2200210_2201038_-	glycosyltransferase	NA	NA	NA	NA
AZQ03799.1\|2201090_2201708_-	thiamine phosphate synthase	NA	NA	NA	NA
AZQ02335.1\|2201744_2201924_-	hypothetical protein	NA	NA	NA	NA
AZQ02336.1\|2202015_2202294_+	hypothetical protein	NA	NA	NA	NA
AZQ02337.1\|2202283_2202973_-	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA
AZQ02338.1\|2202982_2203765_-	outer membrane lipoprotein-sorting protein	NA	NA	NA	NA
AZQ02339.1\|2203766_2205293_-	IMP dehydrogenase	A0A1V0SHK8	Klosneuvirus	5.6e-77	35.6
AZQ02340.1\|2205363_2206527_+	DUF1577 domain-containing protein	NA	NA	NA	NA
AZQ02341.1\|2206712_2208413_+	hypothetical protein	NA	NA	NA	NA
AZQ02342.1\|2208524_2210516_+	ligase	NA	NA	NA	NA
AZQ02343.1\|2210522_2212154_+	hypothetical protein	NA	NA	NA	NA
AZQ02344.1\|2212309_2213971_-	hypothetical protein	NA	NA	NA	NA
AZQ02345.1\|2214340_2215639_-	[cytidine(C)-cytidine(C)-adenosine (A)]-adding enzyme	H7BUW3	unidentified_phage	3.1e-36	44.6
AZQ02346.1\|2215631_2215979_-	hypothetical protein	NA	NA	NA	NA
AZQ02347.1\|2215998_2216388_-	ribonuclease HI	A0A076FI68	Aureococcus_anophage	1.2e-12	36.5
AZQ02348.1\|2216384_2216702_-	hypothetical protein	NA	NA	NA	NA
AZQ02349.1\|2216825_2217593_+	arginyltransferase	NA	NA	NA	NA
AZQ02350.1\|2217722_2218463_+	short-chain dehydrogenase	NA	NA	NA	NA
AZQ02351.1\|2218491_2219988_+	FAD-binding oxidoreductase	NA	NA	NA	NA
AZQ02352.1\|2219991_2221470_+	dolichyl-phosphate-mannose--protein mannosyltransferase	NA	NA	NA	NA
AZQ02353.1\|2221488_2222622_+	glycosyltransferase family 2 protein	NA	NA	NA	NA
AZQ02354.1\|2222644_2223013_-	hypothetical protein	NA	NA	NA	NA
AZQ02355.1\|2223712_2224021_+	XRE family transcriptional regulator	NA	NA	NA	NA
AZQ02356.1\|2224043_2227364_-	CusA/CzcA family heavy metal efflux RND transporter	NA	NA	NA	NA
AZQ02357.1\|2227923_2231274_-	CusA/CzcA family heavy metal efflux RND transporter	NA	NA	NA	NA
AZQ02358.1\|2231280_2232024_-	hypothetical protein	NA	NA	NA	NA
AZQ02359.1\|2232025_2233027_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
AZQ02360.1\|2233037_2234438_-	TolC family protein	NA	NA	NA	NA
AZQ02361.1\|2234455_2234638_+	hypothetical protein	NA	NA	NA	NA
AZQ02362.1\|2234589_2234967_-	hypothetical protein	NA	NA	NA	NA
AZQ02363.1\|2235144_2235606_-	hypothetical protein	NA	NA	NA	NA
AZQ02364.1\|2235626_2238353_-	preprotein translocase subunit SecA	NA	NA	NA	NA
AZQ02365.1\|2238482_2239241_-	type 1 glutamine amidotransferase	NA	NA	NA	NA
AZQ03800.1\|2239237_2239876_-	TlpA family protein disulfide reductase	NA	NA	NA	NA
AZQ02366.1\|2240061_2240643_-	hypothetical protein	NA	NA	NA	NA
AZQ02367.1\|2240617_2241175_-	DUF4416 domain-containing protein	NA	NA	NA	NA
AZQ02368.1\|2241176_2242190_-	alpha/beta hydrolase	NA	NA	NA	NA
AZQ02369.1\|2242211_2242568_-	hypothetical protein	NA	NA	NA	NA
AZQ02370.1\|2242583_2243177_-\|protease	ATP-dependent Clp protease proteolytic subunit	A0A223W000	Agrobacterium_phage	3.1e-31	43.7
AZQ02371.1\|2243195_2243654_-	septum formation initiator	NA	NA	NA	NA
AZQ02372.1\|2243821_2245120_-	phosphopyruvate hydratase	A0A1X9I5Z8	Streptococcus_phage	4.5e-152	64.4
AZQ02373.1\|2245420_2245909_+	DNA primase	NA	NA	NA	NA
AZQ02374.1\|2246057_2247296_+	DUF115 domain-containing protein	NA	NA	NA	NA
AZQ03801.1\|2247402_2247873_+	response regulator	NA	NA	NA	NA
AZQ03802.1\|2247910_2249116_+	HEAT repeat domain-containing protein	NA	NA	NA	NA
AZQ03803.1\|2249118_2249628_+	hypothetical protein	NA	NA	NA	NA
AZQ02375.1\|2249611_2250184_+	acyltransferase	NA	NA	NA	NA
AZQ02376.1\|2250692_2251193_+	hypothetical protein	NA	NA	NA	NA
AZQ02377.1\|2252692_2253501_-\|transposase	IS5/IS1182 family transposase	NA	NA	NA	NA
AZQ02378.1\|2254265_2255318_+\|transposase	IS481 family transposase	E9P643	Wolbachia_endosymbiont_wVitB_of_Nasonia_vitripennis_phage	4.1e-71	41.7
AZQ02379.1\|2255422_2256652_-\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	7.7e-53	49.7

DBSCAN-SWA_7

2622499 : 2662498

Feldmannia_irregularis_virus(33.33%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZQ02665.1\|2622499_2623957_+\|protease	serine protease	NA	NA	NA	NA
AZQ02666.1\|2623953_2625312_+\|protease	serine protease	NA	NA	NA	NA
AZQ02667.1\|2625366_2626281_+	two-component system response regulator	Q6XM27	Feldmannia_irregularis_virus	1.3e-07	28.8
AZQ02668.1\|2626260_2627952_-	hypothetical protein	NA	NA	NA	NA
AZQ02669.1\|2627948_2629235_-	polysaccharide biosynthesis protein	NA	NA	NA	NA
AZQ02670.1\|2629248_2630208_-	phosphatase PAP2 family protein	NA	NA	NA	NA
AZQ02671.1\|2630404_2631208_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
AZQ02672.1\|2631244_2634622_+	methylmalonyl-CoA mutase	NA	NA	NA	NA
AZQ02673.1\|2634585_2634822_-	hypothetical protein	NA	NA	NA	NA
AZQ02674.1\|2635111_2636794_-	dihydroxy-acid dehydratase	NA	NA	NA	NA
AZQ02675.1\|2637033_2637231_-	hypothetical protein	NA	NA	NA	NA
AZQ03825.1\|2637291_2637483_-	hypothetical protein	NA	NA	NA	NA
AZQ02676.1\|2638194_2639346_+	hypothetical protein	NA	NA	NA	NA
AZQ02677.1\|2639414_2639600_-	hypothetical protein	NA	NA	NA	NA
AZQ02678.1\|2639676_2639967_+	GTP cyclohydrolase	NA	NA	NA	NA
AZQ02679.1\|2639963_2641283_-	adenylate/guanylate cyclase domain-containing protein	A0A218MLZ2	uncultured_virus	6.6e-26	30.6
AZQ02680.1\|2641522_2642419_-	glycosyl transferase	NA	NA	NA	NA
AZQ02681.1\|2642415_2644503_-	ligase	NA	NA	NA	NA
AZQ02682.1\|2644642_2644945_+	sulfate transporter	NA	NA	NA	NA
AZQ02683.1\|2644941_2645379_+	hypothetical protein	NA	NA	NA	NA
AZQ02684.1\|2645571_2646507_+	metallo-mystery pair system four-Cys motif protein	NA	NA	NA	NA
AZQ02685.1\|2646554_2647739_+	di-heme enzyme	NA	NA	NA	NA
AZQ02686.1\|2647710_2648589_+	hypothetical protein	NA	NA	NA	NA
AZQ02687.1\|2648588_2649560_+	hypothetical protein	NA	NA	NA	NA
AZQ02688.1\|2650246_2652922_+	hypothetical protein	NA	NA	NA	NA
AZQ02689.1\|2653845_2654247_-\|transposase	DDE transposase	NA	NA	NA	NA
AZQ02690.1\|2654120_2654639_-\|transposase	IS5/IS1182 family transposase	A0A0N9SHJ4	Paenibacillus_phage	1.3e-14	40.7
AZQ02691.1\|2654771_2655014_+	hypothetical protein	NA	NA	NA	NA
AZQ02692.1\|2655310_2655490_+	hypothetical protein	NA	NA	NA	NA
AZQ02693.1\|2655512_2656320_+\|transposase	IS5/IS1182 family transposase	NA	NA	NA	NA
AZQ03826.1\|2656795_2656990_-	hypothetical protein	NA	NA	NA	NA
AZQ02694.1\|2656886_2657978_+	DUF1565 domain-containing protein	NA	NA	NA	NA
AZQ02695.1\|2658419_2660348_-	DUF4105 domain-containing protein	NA	NA	NA	NA
AZQ02696.1\|2660396_2660675_-	hypothetical protein	NA	NA	NA	NA
AZQ02697.1\|2661517_2662498_+\|transposase	IS110 family transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr_ID: CP024871.1|AZQ01481.1|1084234_1084459_-|hypothetical-protein

Click the colored protein region to show detailed information

Acr_ID: CP024871.1|AZQ01482.1|1084461_1084698_+|hypothetical-protein

Click the colored protein region to show detailed information

Acr_ID: CP024871.1|AZQ02152.1|1975544_1975733_-|hypothetical-protein

Click the colored protein region to show detailed information

Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

CP024871.1|AZQ01481.1|1084234_1084459_-|hypothetical-protein

1084234_1084459_-

74 aa aa

HTH_Tnp_1,HTH_21

Identity	Hit_domain_coverage
0.4507042253521127	0.9594594594594594

1049090-1135162

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
CP024871_2	Orphan	2.4\|846621\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	846621-846652	32	1051909-1051878	0

1. spacer 2.4|846621|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to CP024871 position: 1051909-1051878, mismatch: 0

aaatctatcaagtggaagtctcagcggatctg	CRISPR spacer
aaatctatcaagtggaagtctcagcggatctg	Protospacer
********************************

CP024871.1|AZQ01482.1|1084461_1084698_+|hypothetical-protein

1084461_1084698_+

78 aa aa

HTH_Tnp_1,HTH_21

Identity	Hit_domain_coverage
0.4507042253521127	0.9594594594594594

1049090-1135162

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
CP024871_2	Orphan	2.4\|846621\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	846621-846652	32	1051909-1051878	0

1. spacer 2.4|846621|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to CP024871 position: 1051909-1051878, mismatch: 0

aaatctatcaagtggaagtctcagcggatctg	CRISPR spacer
aaatctatcaagtggaagtctcagcggatctg	Protospacer
********************************

CP024871.1|AZQ02152.1|1975544_1975733_-|hypothetical-protein

1975544_1975733_-

62 aa aa

HTH_Tnp_1,HTH_21

Identity	Hit_domain_coverage
0.4507042253521127	0.9594594594594594

1968161-1991775

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location
CP024871_1	Orphan	1.11\|574848\|32\|CP024871\|CRISPRCasFinder,CRT,PILER-CR	574848-574879	32	1982655-1982686
CP024871_2	Orphan	2.4\|846621\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	846621-846652	32	1980552-1980521
CP024871_2	Orphan	2.4\|846621\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	846621-846652	32	1983623-1983654

1. spacer 1.11|574848|32|CP024871|CRISPRCasFinder,CRT,PILER-CR matches to CP024871 position: 1982655-1982686, mismatch: 0

aaatacgtcgtaggaaaaaaactcctgaaagt	CRISPR spacer
aaatacgtcgtaggaaaaaaactcctgaaagt	Protospacer
********************************

2. spacer 2.4|846621|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to CP024871 position: 1980552-1980521, mismatch: 0

aaatctatcaagtggaagtctcagcggatctg	CRISPR spacer
aaatctatcaagtggaagtctcagcggatctg	Protospacer
********************************

3. spacer 2.4|846621|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to CP024871 position: 1983623-1983654, mismatch: 0

aaatctatcaagtggaagtctcagcggatctg	CRISPR spacer
aaatctatcaagtggaagtctcagcggatctg	Protospacer
********************************

2. CP024873

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

699 : 69801

Leptospira_phage(95.45%)

plate,transposase,capsid,terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZQ04194.1\|699_1131_-	hypothetical protein	S5VT39	Leptospira_phage	4.3e-75	96.5
AZQ04195.1\|1134_2757_-	hypothetical protein	S5VT15	Leptospira_phage	1.0e-286	93.3
AZQ04196.1\|2926_3136_-	hypothetical protein	S5VKS6	Leptospira_phage	5.3e-23	88.4
AZQ04197.1\|3151_3913_-	hypothetical protein	S5W9I2	Leptospira_phage	4.1e-137	94.0
AZQ04198.1\|4003_4930_-\|transposase	transposase	S5VY82	Leptospira_phage	4.1e-139	83.8
AZQ04199.1\|4971_5712_-	hypothetical protein	S5VST2	Leptospira_phage	6.6e-108	78.4
AZQ04200.1\|5768_7220_-\|capsid	capsid protein	S5W9G9	Leptospira_phage	2.9e-264	91.5
AZQ04201.1\|7216_7915_-	hypothetical protein	S5VXZ1	Leptospira_phage	1.4e-67	65.1
AZQ04202.1\|7907_8843_-	hypothetical protein	S5W9I9	Leptospira_phage	6.6e-137	81.7
AZQ04203.1\|9350_9740_-	hypothetical protein	S5W9F3	Leptospira_phage	1.7e-46	71.1
AZQ04204.1\|9785_11339_-	hypothetical protein	S5VKR8	Leptospira_phage	7.5e-271	87.0
AZQ04205.1\|11362_12046_-\|plate	baseplate assembly protein	S5VKW4	Leptospira_phage	2.2e-97	88.5
AZQ04206.1\|12042_13926_-	hypothetical protein	S5VXY4	Leptospira_phage	1.3e-309	86.4
AZQ04207.1\|14003_15194_+\|plate	phage baseplate protein	S5VT62	Leptospira_phage	2.0e-199	87.9
AZQ04208.1\|15190_15784_+	hypothetical protein	S5VKS2	Leptospira_phage	6.3e-101	92.4
AZQ04209.1\|15773_16547_+	hypothetical protein	S5VXY8	Leptospira_phage	2.6e-123	85.6
AZQ04210.1\|16597_16984_+	hypothetical protein	NA	NA	NA	NA
AZQ04211.1\|17184_17499_+	hypothetical protein	S5VT44	Leptospira_phage	9.5e-40	81.7
AZQ04212.1\|17495_17717_+	hypothetical protein	S5WIN7	Leptospira_phage	1.3e-24	86.3
AZQ04271.1\|18026_18350_-	hypothetical protein	S5WIP8	Leptospira_phage	1.3e-15	43.9
AZQ04213.1\|18494_18716_-	hypothetical protein	S5VKV7	Leptospira_phage	5.8e-28	83.6
AZQ04214.1\|19647_20064_-	hypothetical protein	S5VKY7	Leptospira_phage	2.7e-50	76.6
AZQ04215.1\|20071_21184_-	hypothetical protein	S5W9G1	Leptospira_phage	1.1e-194	89.2
AZQ04216.1\|21180_21426_-	cold-shock protein	S5WIT6	Leptospira_phage	5.0e-36	90.1
AZQ04273.1\|21404_21950_-	hypothetical protein	S5VXZ5	Leptospira_phage	2.4e-67	84.4
AZQ04272.1\|21954_22779_-	hypothetical protein	S5W9I6	Leptospira_phage	5.2e-138	88.7
AZQ04217.1\|22929_23274_-	hypothetical protein	S5VY00	Leptospira_phage	4.7e-48	85.8
AZQ04218.1\|23352_24783_-\|terminase	PBSX family phage terminase large subunit	S5VY04	Leptospira_phage	2.0e-249	88.0
AZQ04219.1\|24736_25351_-	hypothetical protein	S5WIR1	Leptospira_phage	1.7e-80	78.9
AZQ04220.1\|25355_26291_-	site-specific DNA-methyltransferase	S5VKV3	Leptospira_phage	4.7e-143	80.4
AZQ04221.1\|26287_27184_-	chromosome partitioning protein	S5WIV5	Leptospira_phage	2.6e-151	89.3
AZQ04222.1\|27348_27603_-	hypothetical protein	S5W9H5	Leptospira_phage	3.3e-35	81.0
AZQ04223.1\|27612_27834_-	hypothetical protein	S5W9H8	Leptospira_phage	2.9e-11	54.5
AZQ04224.1\|27830_29303_-	helix-turn-helix domain-containing protein	S5VKY0	Leptospira_phage	2.5e-122	57.9
AZQ04225.1\|29317_29665_-	hypothetical protein	S5VKW9	Leptospira_phage	2.8e-40	76.2
AZQ04226.1\|29724_30057_-	hypothetical protein	NA	NA	NA	NA
AZQ04227.1\|30354_30534_-	hypothetical protein	S5VKP3	Leptospira_phage	1.5e-10	51.0
AZQ04228.1\|30939_31335_+	XRE family transcriptional regulator	S5VSZ3	Leptospira_phage	1.5e-42	66.4
AZQ04229.1\|31367_31577_+	hypothetical protein	NA	NA	NA	NA
AZQ04230.1\|31700_32573_+	chromosome partitioning protein ParA	S5VST6	Leptospira_phage	6.4e-110	69.4
AZQ04231.1\|32578_33523_+	chromophore lyase	S5WII0	Leptospira_phage	3.4e-64	51.2
AZQ04232.1\|33916_35251_+	DNA-binding protein	S5VSV6	Leptospira_phage	2.0e-118	59.8
AZQ04233.1\|36572_40937_+	hypothetical protein	NA	NA	NA	NA
AZQ04234.1\|41507_49175_+	hypothetical protein	NA	NA	NA	NA
AZQ04235.1\|49171_49903_+	hypothetical protein	NA	NA	NA	NA
AZQ04274.1\|50051_53147_+	hypothetical protein	NA	NA	NA	NA
AZQ04236.1\|53204_53594_+	hypothetical protein	NA	NA	NA	NA
AZQ04275.1\|55360_56383_-	hypothetical protein	NA	NA	NA	NA
AZQ04237.1\|56480_57584_-	AraC family transcriptional regulator	S5WIW9	Leptospira_phage	1.6e-121	61.7
AZQ04238.1\|58189_58549_+	XRE family transcriptional regulator	NA	NA	NA	NA
AZQ04276.1\|58535_59450_-	hypothetical protein	NA	NA	NA	NA
AZQ04239.1\|59454_60102_-	hypothetical protein	NA	NA	NA	NA
AZQ04240.1\|60485_61460_+	hypothetical protein	S5VSW1	Leptospira_phage	3.2e-94	65.1
AZQ04241.1\|62196_62469_+	hypothetical protein	NA	NA	NA	NA
AZQ04242.1\|62536_63427_+	SH3 domain-containing protein	NA	NA	NA	NA
AZQ04277.1\|63620_63848_-	hypothetical protein	NA	NA	NA	NA
AZQ04243.1\|63948_64893_-	hypothetical protein	A4PE73	Ralstonia_virus	8.6e-28	31.2
AZQ04244.1\|64898_65870_-	hypothetical protein	S5VKJ6	Leptospira_phage	2.1e-146	80.8
AZQ04245.1\|66360_66828_-	hypothetical protein	NA	NA	NA	NA
AZQ04246.1\|66910_67099_+	hypothetical protein	NA	NA	NA	NA
AZQ04247.1\|68410_68560_+	hypothetical protein	NA	NA	NA	NA
AZQ04248.1\|68610_69801_+\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	7.5e-53	49.7

DBSCAN-SWA_2

81788 : 93829

Leptospira_phage(100.0%)

portal

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZQ04257.1\|81788_82169_-	hypothetical protein	S5VXX8	Leptospira_phage	1.7e-54	81.0
AZQ04258.1\|82165_82435_-	hypothetical protein	S5VKW0	Leptospira_phage	1.5e-17	53.9
AZQ04259.1\|82501_82843_-	hypothetical protein	S5VT53	Leptospira_phage	1.7e-42	83.2
AZQ04260.1\|82851_83508_-	hypothetical protein	S5VXY9	Leptospira_phage	2.5e-111	89.0
AZQ04261.1\|83577_84519_-	hypothetical protein	S5VSX8	Leptospira_phage	1.1e-163	85.6
AZQ04262.1\|84547_85015_-	hypothetical protein	S5WIM6	Leptospira_phage	9.4e-52	80.6
AZQ04263.1\|85021_85327_-	hypothetical protein	S5W9K5	Leptospira_phage	7.8e-47	90.1
AZQ04264.1\|85514_87074_+\|portal	portal protein	S5VXZ3	Leptospira_phage	4.7e-265	87.1
AZQ04265.1\|87070_88216_-	hypothetical protein	S5WIM4	Leptospira_phage	4.5e-156	81.6
AZQ04266.1\|88216_89560_-	hypothetical protein	S5VKU2	Leptospira_phage	7.3e-198	78.5
AZQ04267.1\|89556_91035_-	hypothetical protein	S5VXZ6	Leptospira_phage	5.4e-234	81.9
AZQ04268.1\|91031_91421_-	hypothetical protein	S5W9J2	Leptospira_phage	1.7e-62	89.1
AZQ04269.1\|91459_93130_-	hypothetical protein	S5WIR5	Leptospira_phage	6.5e-228	85.9
AZQ04270.1\|93190_93829_-	hypothetical protein	S5VKT5	Leptospira_phage	7.5e-92	83.4

Anti-CRISPR protein detection

Acr_ID: CP024873.1|AZQ04222.1|27348_27603_-|hypothetical-protein

Click the colored protein region to show detailed information

Acr_ID: CP024873.1|AZQ04223.1|27612_27834_-|hypothetical-protein

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Acr_ID: CP024873.1|AZQ04225.1|29317_29665_-|hypothetical-protein

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Acr_ID: CP024873.1|AZQ04226.1|29724_30057_-|hypothetical-protein

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Acr_ID: CP024873.1|AZQ04227.1|30354_30534_-|hypothetical-protein

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Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

CP024873.1|AZQ04222.1|27348_27603_-|hypothetical-protein

27348_27603_-

84 aa aa

HTH_31

Identity	Hit_domain_coverage
0.40384615384615385	0.8125

699-69801

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
CP024871_2	Orphan	2.4\|846621\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	846621-846652	32	68966-68997	0

1. spacer 2.4|846621|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to CP024873 position: 68966-68997, mismatch: 0

aaatctatcaagtggaagtctcagcggatctg	CRISPR spacer
aaatctatcaagtggaagtctcagcggatctg	Protospacer
********************************

CP024873.1|AZQ04223.1|27612_27834_-|hypothetical-protein

27612_27834_-

73 aa aa

HTH_3,HTH_31

Identity	Hit_domain_coverage
0.40384615384615385	0.8125

699-69801

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
CP024871_2	Orphan	2.4\|846621\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	846621-846652	32	68966-68997	0

1. spacer 2.4|846621|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to CP024873 position: 68966-68997, mismatch: 0

aaatctatcaagtggaagtctcagcggatctg	CRISPR spacer
aaatctatcaagtggaagtctcagcggatctg	Protospacer
********************************

CP024873.1|AZQ04225.1|29317_29665_-|hypothetical-protein

29317_29665_-

115 aa aa

HTH_3,HTH_31

Identity	Hit_domain_coverage
0.4	0.9090909090909091

699-69801

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
CP024871_2	Orphan	2.4\|846621\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	846621-846652	32	68966-68997	0

1. spacer 2.4|846621|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to CP024873 position: 68966-68997, mismatch: 0

aaatctatcaagtggaagtctcagcggatctg	CRISPR spacer
aaatctatcaagtggaagtctcagcggatctg	Protospacer
********************************

CP024873.1|AZQ04226.1|29724_30057_-|hypothetical-protein

29724_30057_-

110 aa aa

HTH_3,HTH_31

Identity	Hit_domain_coverage
0.4	0.9090909090909091

699-69801

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
CP024871_2	Orphan	2.4\|846621\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	846621-846652	32	68966-68997	0

1. spacer 2.4|846621|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to CP024873 position: 68966-68997, mismatch: 0

aaatctatcaagtggaagtctcagcggatctg	CRISPR spacer
aaatctatcaagtggaagtctcagcggatctg	Protospacer
********************************

CP024873.1|AZQ04227.1|30354_30534_-|hypothetical-protein

30354_30534_-

59 aa aa

HTH_3

Identity	Hit_domain_coverage
0.4	0.9090909090909091

699-69801

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
CP024871_2	Orphan	2.4\|846621\|32\|CP024871\|PILER-CR,CRISPRCasFinder,CRT	846621-846652	32	68966-68997	0

1. spacer 2.4|846621|32|CP024871|PILER-CR,CRISPRCasFinder,CRT matches to CP024873 position: 68966-68997, mismatch: 0

aaatctatcaagtggaagtctcagcggatctg	CRISPR spacer
aaatctatcaagtggaagtctcagcggatctg	Protospacer
********************************

3. CP024872

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

170401 : 223526

Pseudomonas_phage(28.57%)

transposase,integrase,tRNA,protease

attL 193368:193384|attR 223760:223776

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZQ04058.1\|170401_171793_-\|protease	PrsW family intramembrane metalloprotease	NA	NA	NA	NA
AZQ04059.1\|171836_173885_-	LruC domain-containing protein	NA	NA	NA	NA
AZQ04060.1\|174033_174768_-	dimethylmenaquinone methyltransferase	NA	NA	NA	NA
AZQ04061.1\|175262_175790_+	MotA/TolQ/ExbB proton channel family protein	NA	NA	NA	NA
AZQ04062.1\|175792_176206_+	biopolymer transporter ExbD	NA	NA	NA	NA
AZQ04063.1\|176206_176551_-	pyrophosphatase	NA	NA	NA	NA
AZQ04064.1\|176547_177618_-	DUF1574 domain-containing protein	NA	NA	NA	NA
AZQ04065.1\|177630_179028_-	MBOAT family protein	A0A125RNP0	Pseudomonas_phage	7.2e-63	36.2
AZQ04066.1\|179024_180185_-	SGNH/GDSL hydrolase family protein	NA	NA	NA	NA
AZQ04067.1\|180198_181614_-	MBOAT family protein	A0A125RNP0	Pseudomonas_phage	1.7e-59	34.9
AZQ04177.1\|181727_183065_-	hypothetical protein	NA	NA	NA	NA
AZQ04068.1\|183265_183868_-	hypothetical protein	NA	NA	NA	NA
AZQ04069.1\|183872_185015_-	glycosyltransferase family 1 protein	NA	NA	NA	NA
AZQ04070.1\|185014_186490_-	DUF2029 domain-containing protein	NA	NA	NA	NA
AZQ04071.1\|186604_187648_+\|tRNA	S-adenosylmethionine:tRNA ribosyltransferase-isomerase	NA	NA	NA	NA
AZQ04072.1\|187744_189367_+\|protease	ATP-dependent protease	NA	NA	NA	NA
AZQ04073.1\|189643_191017_+	hypothetical protein	NA	NA	NA	NA
AZQ04074.1\|191138_191444_+	DNA-binding protein	NA	NA	NA	NA
AZQ04075.1\|191697_192438_+	hypothetical protein	NA	NA	NA	NA
AZQ04178.1\|192450_193185_-	leucine-rich repeat domain-containing protein	NA	NA	NA	NA
193368:193384	attL	NA	NA	NA	NA
AZQ04076.1\|193454_194033_+	hypothetical protein	NA	NA	NA	NA
AZQ04179.1\|194046_194739_+	heme-binding protein HmuY	NA	NA	NA	NA
AZQ04077.1\|194743_196846_+	TonB-dependent receptor	NA	NA	NA	NA
AZQ04078.1\|196905_198102_-	MFS transporter	NA	NA	NA	NA
AZQ04079.1\|198103_198781_-	biliverdin-producing heme oxygenase	M4QDD1	Prochlorococcus_phage	1.1e-43	44.7
AZQ04080.1\|199280_200855_+	hypothetical protein	NA	NA	NA	NA
AZQ04180.1\|200863_202096_+	hypothetical protein	NA	NA	NA	NA
AZQ04081.1\|202243_203827_-	PDZ domain-containing protein	NA	NA	NA	NA
AZQ04082.1\|203841_205350_-\|protease	serine protease	A0A1V0CPG8	Kaumoebavirus	1.1e-16	23.8
AZQ04083.1\|205380_205914_-	adenine phosphoribosyltransferase	A0A1V0SKE5	Klosneuvirus	1.2e-29	43.9
AZQ04084.1\|206126_207014_-\|protease	protease HtpX	NA	NA	NA	NA
AZQ04085.1\|207215_208826_-	permease	NA	NA	NA	NA
AZQ04086.1\|208822_209305_-	stringent starvation protein B	NA	NA	NA	NA
AZQ04087.1\|209297_211190_-	polysaccharide biosynthesis protein	L7RD47	Acanthamoeba_polyphaga_moumouvirus	1.7e-11	27.5
AZQ04088.1\|211336_211786_+	hypothetical protein	NA	NA	NA	NA
AZQ04089.1\|211791_213924_-	hypothetical protein	NA	NA	NA	NA
AZQ04090.1\|214646_215498_+	cobalamin biosynthesis protein CbiD	NA	NA	NA	NA
AZQ04091.1\|217413_218286_+	precorrin-3B C(17)-methyltransferase	NA	NA	NA	NA
AZQ04092.1\|218287_220189_-	DUF1561 domain-containing protein	NA	NA	NA	NA
AZQ04093.1\|220578_220794_-	hypothetical protein	S5WIU1	Leptospira_phage	3.9e-29	88.2
AZQ04094.1\|221130_221322_-	hypothetical protein	NA	NA	NA	NA
AZQ04181.1\|221473_221986_+\|integrase	integrase core domain protein	NA	NA	NA	NA
AZQ04095.1\|222224_223526_+\|transposase	ISNCY family transposase	NA	NA	NA	NA
223760:223776	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP024871

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CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

2. CP024873

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

3. CP024872

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection