CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
CP019189	Salmonella enterica subsp. enterica serovar Poona str. ATCC BAA-1673 chromosome, complete genome	3 crisprs	cas3,PD-DExK,WYL,cas8e,cse2gr11,cas5,cas6e,cas1,cas2,csa3,DEDDh,DinG,Cas9_archaeal	19	13
CP019190	Salmonella enterica subsp. enterica serovar Poona str. ATCC BAA-1673 plasmid pATCCBAA1673_01, complete sequence	0 crisprs	RT	0	7
CP019191	Salmonella enterica subsp. enterica serovar Poona str. ATCC BAA-1673 plasmid pATCCBAA1673_02, complete sequence	0 crisprs	NA	0	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP019189_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP019189_1

620775-621023

Orphan

Consensus_repeat	Method
TTTTACAGGGCGACAGGATGAATGACTGTCCACGACACTATACCCAAAAGAAA	PILER-CR

2 spacers

The CRISPR arrays of CP019189_1

>merge|CP019189|1|620775-621023|PILER-CR
GATGAATGACTGTCCACGACAGAACCCGGCTTATCGGTCAGTTTCACTTCTTCATAAAACCCGCTTCGGCGGGTTTTTGCTTTTACAGGGCGACAGGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTCACCTCTTCATAAAACCCGTCAGTGTAAGCTGGCGGGTTTTTGCTTTTACAGGGCGGCAGGATGAATGACTGTCCACGACGCTATACCCAAAAGAAA

>CP019189|1|1|620775-621023|PILER-CR
GATGAATGACTGTCCACGACAGAACCCGGCTTATCGGTCAGTTTCACTTCTTCA	TAAAACCCGCTTCGGCGGGTTTTTGCTTTTACAGGGCGACAGGATGAATGACTGTCCAC
GACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTCACCTCTTCATAAAA	CCCGTCAGTGTAAGCTGGCGGGTTTTTGCTTTTACAGGGCGGCAGGATGAATGACTGTCCACG
ACGCTATACCCAAAAGAAA

Protein	Signature genes	Signature genes Name	Protein_function
CP019189.1\|AUM38963.1\|621769_622708_+\|transcriptional-regulator-TdcA	unknown	unknown	gnl\|CDD\|182391
CP019189.1\|AUM38961.1\|618282_619173_+\|2-hydroxy-3-oxopropionate-reductase	unknown	unknown	gnl\|CDD\|183197
CP019189.1\|AUM38967.1\|626455_628750_+\|formate-acetyltransferase	unknown	unknown	gnl\|CDD\|153087
CP019189.1\|AUM38965.1\|623815_625147_+\|threonine/serine-transporter-TdcC	unknown	unknown	gnl\|CDD\|184191
CP019189.1\|AUM42935.1\|630499_631831_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|273283
CP019189.1\|AUM38954.1\|608994_609801_-\|PTS-fructose-transporter-subunit-IIA	unknown	unknown	gnl\|CDD\|227014
CP019189.1\|AUM38955.1\|609787_611215_-\|PTS-fructose-transporter-subunit-IIC	unknown	unknown	gnl\|CDD\|224218
CP019189.1\|AUM38970.1\|633279_633444_-\|hypothetical-protein	unknown	unknown	unknown
CP019189.1\|AUM38959.1\|615385_616957_-\|galactarate-dehydratase	unknown	unknown	gnl\|CDD\|274491
CP019189.1\|AUM38969.1\|631856_633167_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226206
CP019189.1\|AUM38960.1\|617486_618257_+\|5-keto-4-deoxy-D-glucarate-aldolase	unknown	unknown	gnl\|CDD\|182547
CP019189.1\|AUM38971.1\|633467_634169_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224655
CP019189.1\|AUM38958.1\|614198_615146_+\|sugar-kinase	unknown	unknown	gnl\|CDD\|238571
CP019189.1\|AUM38956.1\|612166_613021_-\|tagatose-1,6-bisphosphate-aldolase	unknown	unknown	gnl\|CDD\|183710
CP019189.1\|AUM38968.1\|628819_630184_+\|L-serine-ammonia-lyase	unknown	unknown	gnl\|CDD\|185000
CP019189.1\|AUM38962.1\|619270_620416_+\|glycerate-2-kinase	unknown	unknown	gnl\|CDD\|182392
CP019189.1\|AUM42934.1\|611241_612156_-\|1-phosphofructokinase	unknown	unknown	gnl\|CDD\|274804
CP019189.1\|AUM38957.1\|613354_614188_+\|DeoR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224268
CP019189.1\|AUM38964.1\|622805_623795_+\|serine/threonine-dehydratase	unknown	unknown	gnl\|CDD\|236317
CP019189.1\|AUM38966.1\|625213_626422_+\|propionate/acetate-kinase	unknown	unknown	gnl\|CDD\|183484

Protein	Function_ID	Function_description	E-value
CP019189.1\|AUM38963.1\|621769_622708_+\|transcriptional-regulator-TdcA	gnl\|CDD\|182391	PRK10341, PRK10341, transcriptional regulator TdcA.	0
CP019189.1\|AUM38961.1\|618282_619173_+\|2-hydroxy-3-oxopropionate-reductase	gnl\|CDD\|183197	PRK11559, garR, tartronate semialdehyde reductase; Provisional.	0
CP019189.1\|AUM38967.1\|626455_628750_+\|formate-acetyltransferase	gnl\|CDD\|153087	cd01678, PFL1, Pyruvate formate lyase 1. Pyruvate formate lyase catalyzes a key step in anaerobic glycolysis, the conversion of pyruvate and CoenzymeA to formate and acetylCoA. The PFL mechanism involves an unusual radical cleavage of pyruvate in which two cysteines and one glycine form radicals that are required for catalysis. PFL has a ten-stranded alpha/beta barrel domain that is structurally similar to those of all three ribonucleotide reductase (RNR) classes as well as benzylsuccinate synthase and B12-independent glycerol dehydratase.	0
CP019189.1\|AUM38965.1\|623815_625147_+\|threonine/serine-transporter-TdcC	gnl\|CDD\|184191	PRK13629, PRK13629, threonine/serine transporter TdcC; Provisional.	0
CP019189.1\|AUM42935.1\|630499_631831_+\|hypothetical-protein	gnl\|CDD\|273283	TIGR00814, membrane_transport_protein_YhjV, serine transporter. The Hydroxy/Aromatic Amino Acid Permease (HAAAP) Family- serine/threonine subfamily (TC 2.A.42.2) The HAAAP family includes well characterized aromatic amino acid:H+ symport permeases and hydroxy amino acid permeases. This subfamily is specific for hydroxy amino acid transporters and includes the serine permease, SdaC, of E. coli, and the threonine permease, TdcC, of E. coli.//added GO terms, none avaialbelf or ser/thr specifically [SS 2/6/05] [Transport and binding proteins, Amino acids, peptides and amines].	3.37807e-164
CP019189.1\|AUM38954.1\|608994_609801_-\|PTS-fructose-transporter-subunit-IIA	gnl\|CDD\|227014	COG4668, MtlA, Mannitol/fructose-specific phosphotransferase system, IIA domain [Carbohydrate transport and metabolism].	2.94322e-65
CP019189.1\|AUM38955.1\|609787_611215_-\|PTS-fructose-transporter-subunit-IIC	gnl\|CDD\|224218	COG1299, FruA, Phosphotransferase system, fructose-specific IIC component [Carbohydrate transport and metabolism].	6.45118e-127
CP019189.1\|AUM38959.1\|615385_616957_-\|galactarate-dehydratase	gnl\|CDD\|274491	TIGR03248, galactar-dH20, galactarate dehydratase. Galactarate dehydratase converts D-galactarate to 5-dehydro-4-deoxyglucarate which is subsequently acted on by GarL, tartronate semialdehyde reductase and glycerate kinase (GenProp0714).	0
CP019189.1\|AUM38969.1\|631856_633167_+\|hypothetical-protein	gnl\|CDD\|226206	COG3681, COG3681, L-cysteine desulfidase [Amino acid transport and metabolism].	0
CP019189.1\|AUM38960.1\|617486_618257_+\|5-keto-4-deoxy-D-glucarate-aldolase	gnl\|CDD\|182547	PRK10558, PRK10558, alpha-dehydro-beta-deoxy-D-glucarate aldolase; Provisional.	0
CP019189.1\|AUM38971.1\|633467_634169_-\|hypothetical-protein	gnl\|CDD\|224655	COG1741, COG1741, Pirin-related protein [General function prediction only].	2.87451e-68
CP019189.1\|AUM38958.1\|614198_615146_+\|sugar-kinase	gnl\|CDD\|238571	cd01166, KdgK, 2-keto-3-deoxygluconate kinase (KdgK) phosphorylates 2-keto-3-deoxygluconate (KDG) to form 2-keto-3-deoxy-6-phosphogluconate (KDGP). KDG is the common intermediate product, that allows organisms to channel D-glucuronate and/or D-galacturinate into the glycolysis and therefore use polymers, like pectin and xylan as carbon sources.	1.26373e-99
CP019189.1\|AUM38956.1\|612166_613021_-\|tagatose-1,6-bisphosphate-aldolase	gnl\|CDD\|183710	PRK12737, gatY, tagatose-bisphosphate aldolase subunit GatY.	0
CP019189.1\|AUM38968.1\|628819_630184_+\|L-serine-ammonia-lyase	gnl\|CDD\|185000	PRK15040, PRK15040, L-serine ammonia-lyase.	0
CP019189.1\|AUM38962.1\|619270_620416_+\|glycerate-2-kinase	gnl\|CDD\|182392	PRK10342, PRK10342, glycerate kinase I; Provisional.	0
CP019189.1\|AUM42934.1\|611241_612156_-\|1-phosphofructokinase	gnl\|CDD\|274804	TIGR03828, pfkB, 1-phosphofructokinase. This enzyme acts in concert with the fructose-specific phosphotransferase system (PTS) which imports fructose as fructose-1-phosphate. The action of 1-phosphofructokinase results in beta-D-fructose-1,6-bisphosphate and is an entry point into glycolysis (GenProp0688).	4.12426e-128
CP019189.1\|AUM38957.1\|613354_614188_+\|DeoR-family-transcriptional-regulator	gnl\|CDD\|224268	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism].	1.54692e-55
CP019189.1\|AUM38964.1\|622805_623795_+\|serine/threonine-dehydratase	gnl\|CDD\|236317	PRK08638, PRK08638, bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB.	0
CP019189.1\|AUM38966.1\|625213_626422_+\|propionate/acetate-kinase	gnl\|CDD\|183484	PRK12379, PRK12379, propionate kinase.	0

>CP019189.1|AUM38962.1|619270_620416_+|glycerate-2-kinase
MKIVIAPDSYKESLSAAEVAQAIEKGFREIFPDAQYVSVPVADGGEGTVEAMIAATQGVERTAWVTGPLGEKVKACWGMSGDGKTAFIEMAAASGLALVPPEKRNPLITTSRGTGELILQALESGASNIIIGIGGSATNDGGAGMMQALGAKLRDANGADIGYGGGSLHCLSDIDISDLDPRLKLCAIRVACDVSNPLIGDNGASRIFGPQKGATEENIVELDRNLAHYADIIKKSLDVDVKAAPGAGAAGGMGAALMAFLGAELRSGIEIVTAALNLEEHIHDCTLVVTGEGRIDSQSIRGKVPIGVANVAKKYHKPVIGIAGSLTHDVGIVHHYGIDAVFSVLTRIVTLEEAFRGAFDNIYRASRNVAAALAIGMRSAG
>CP019189.1|AUM38961.1|618282_619173_+|2-hydroxy-3-oxopropionate-reductase
MTMKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGIIEGAKPGTVLIDMSSIAPLASREISDVLKAKGVEMLDAPVSGGEPKAIDGTLSVMVGGDKAIFDKYYDLMKAMAGSVVHTGDIGAGNVTKLANQVIVALNIAAMSEALTLATKAGVNPDLVYQAIRGGLAGSTVLDAKAPMVMDRNFKPGFRIDLHIKDLANALDTSHGVGAQLPLTAAVMEMMQALRADGHGNDDHSALACYYEKLAKVEVTR
>CP019189.1|AUM38960.1|617486_618257_+|5-keto-4-deoxy-D-glucarate-aldolase
MNNAIFPNKFKAALAAQQVQIGCWSALASPITTEVLGLAGFDWLVLDGEHAPNDVTTLIPQLMALKGSASAPVVRVPTNEPVIIKRMLDIGFYNFLIPFVETQEEAARAVASTRYPPEGIRGVSVSHRANMFGTVPDYFAQSNKNITIIVQIESQLGVDNVDAIAATEGVDGIFVGPSDLAAALGHLGNASHPDVQQTIQHIFARAKAHGKPCGILAPVEADARRYLEWGATFVAVGSDLGAFRASTQKLADTFKK
>CP019189.1|AUM38959.1|615385_616957_-|galactarate-dehydratase
MANIEIRQESPSAFYIKVHETDNVAIIVNDHGLKAGTRFPDGLELTEHIPQGHKVALTDIPAHGEIIRYGEVIGYAVRDIPRGSWIDESLVELPKAPPLNTLPLATKVPEPLPPLEGYTFEGYRNADGSVGTKNLLGITTSVHCVAGVVDYVVKLIERDLLPKYPNVDGVVGLNHLYGCGVAINAPAAVVPIRTIHNIALNPNFGGEVMVIGLGCEKLQPERLLEGTEDVPAIAVESASIVRLQDEQHVGFKSMVDDILRVAERHLTKLNQRQRETCPASELVVGMQCGGSDAFSGVTANPAVGYASDLLVRCGATVMFSEVTEVRDAIHLLTPRAINEAVGKRLLDEMAWYDNYLDMGKTDRSANPSPGNKKGGLANVVEKALGSIAKSGKSAIVEVLSPGQRPTKRGLIYAATPASDFVCGTQQVASGITVQVFTTGRGTPYGLMAVPVIKMATRTELANRWYDLMDINAGTIATGEETIEDVGWKLFHFILDVASGRKKTFSDQWGLHNQLAVFNPAPVT
>CP019189.1|AUM38958.1|614198_615146_+|sugar-kinase
MNITIATLGELLVEFLAKKENQGFSSPGEFWGPYPSGAPAIFADQVAKLGFRSLLFSCVGNDAFGVMNITRLSRDGVNVQGISVLPNATTGSAFVSYRSQAQRDFIFNMPDSACGLLSADHLDETLLRQYRHFHIMGSSLFSFRLIDAVRKAISIVKENGGTISFDPNIRKEMLKIREMSQAFEYILDYTDFFLPSDGELDYFGLSKSRDEEKIVARLHKRGIAHVIIKRGARGASYYSKDEQHHVAGYPVKVVDPTGAGDCFGATFVSLFLAGYSVPDALAHANAAGSLAISARGPMEGTSTLAQIKELMMQQN
>CP019189.1|AUM38957.1|613354_614188_+|DeoR-family-transcriptional-regulator
MAKPSTSLLKRRLDIAEIVRKNGEIKVDDLAEMLSVSGVTIRNDLNYLEQQGYLKRSFGGAIYTAQPVRAAVSHEVVQSQALEHSVELELAKQVARLVCDDDTVFLGAGEVLRKALPFLGDYRDLCLIINDLSHVAPARDYIDGEIVLLGGVLGRSGQALGGEIAIQSLQQFQPSCCLVMVDHISEDGTLNVKNESAAALLSECLRLSGQSIAVVAQRPIHDVARYPVGKLNTLSAIITPQIVAAEYHSRFLADGLTNSYTNNECLTWINPTLHQAR
>CP019189.1|AUM38956.1|612166_613021_-|tagatose-1,6-bisphosphate-aldolase
MFIISSKNMLQKAQHAGYAVPAFNIHNLETLQVVVETAAEMRSPLIVAGTPGTFSYAGMGNIVAIAGDLAREYNLPLAIHLDHHESLADIESKVMAGIRSVMIDGSHFPFEENVALVKSVVDFCHRYDTSVEAELGRLGGIEDDLVVDSKDALYTNPQQAREFVARTGIDSLAVAIGTAHGMYAAEPKLDFERLAEIRALVDIPLVLHGASGLPESDIRQAISLGVCKVNVATELKIAFSDALKEYFLQNPKANDPRHYMQPAKQAMKEVVRKVIHVCGCEGQL
>CP019189.1|AUM42934.1|611241_612156_-|1-phosphofructokinase
MIYTLTLNSAIDMNIFSDPLQPNIVNRTHHTEFCPNGKGVNVALVLDHFQIPAHILGIFGGFTGHYIVESLRTRKMPVTPAWVEEPTRINIFIHDGQQEYKLINPGSYIPDECKQQIITIISQLPDAEYLVISGSLPQGIESRFYAEIMHICQQKNIGVILDISHSSLRQLLEFKPLLIKPNDEEVKAIFGLTVSDDNDAKNTLTTLHALGAQNVLLTLGAKGMYFSNGIDYWFCSAPTVDLVSSACAGDAALAAFLSQWLSTGEVEYALSLASATGADVASSAGLGQLAAIETLLSQIHVRKL
>CP019189.1|AUM38955.1|609787_611215_-|PTS-fructose-transporter-subunit-IIC
MKKIIAVTGCPTGIAHTFMAEEALKNAAKKLSVEIKVETNGASGVENAIQPADLVDIAGVIIAADKDVLPDRFNGLPVIEVPVKEAIHHPAELINKVINGEAPIRKGESTTRTEIIEKESLGRQIYKHLMSGVSNMLPFVVAGGILIAVSFLWGIYSADPNSAEYNATAAMLMKIGQQAFSIMVPVFTAYIAFSISGRPGMVAGFVGGLLANATGAGFLGGIIAGFAAGYLMLWVKNRLEGLPRQYEGLKSIFIMPLIGVLVIGVLMSLLGQPVAAINNSMMNWLASLQEANPILLGIVVGAMCSFDFGGPVNKAAYVTGTLLLGQGNFYFMAGVSAACITPPLVIALATTFFPKGFSEEERAAGMVNYILGCTHITEGAIPFAAKDPLRVIPMMMIASSISAVLSYSLRIQVPAPHGGFLILPLVSQPLAWVLCILAGSACGAVMLGLWRLWAVRKNSVNTTPVVKAGGQNAAL
>CP019189.1|AUM38954.1|608994_609801_-|PTS-fructose-transporter-subunit-IIA
MQLCEHDIFVSDERLDKVTALHRVVEKLSAAGNTTPDYLRGMLDREAQISTYLGNGIAIPHGTPESRDAVLQTGVKVIVFRYGVDWGDGNTAYLVTGIAARSNEHLEILRQLTRVLSDDAIPQALAKAESPSQVLTLLTGSTTNTPAAVELQEGEQATFVIHNPHGLHARPSAVLVKFIKQFQSHITVENLDNASGPVDGKNLMRVVSLGAKKGHRLLFRAQGEDAQQALREIEELIASGAGEMITVPVTPPPEVMQPKRSWLSRLFN
>CP019189.1|AUM38963.1|621769_622708_+|transcriptional-regulator-TdcA
MNTLVLPKTQHLVVFQEVIRSGSIGSAAKSLGLTQPAVSKIISDVEAYFGVELIVRKNTGVTLTEAGQVLLSWSESITREMKNMINEMNSMTCNTVVDVSFGFPSLIGFTFMSDMIHKFKEVFPKAQVSMYEAQLSSFLPALRDGRLDFAIGTLSNEMQLQDLHVEPLFESEFVLVASKSRTCTGTITLESLKDEQWVLPQTNMGYYSELLTTLQRNGISIENIVKTDSVVTIYNLVLNADFLTVIPCDMTTPFGSNQFITIPIKDTLPVARYAAVWSKNYRIKKAASVLVELAKQYSSYNGCRRRQLIEIE
>CP019189.1|AUM38964.1|622805_623795_+|serine/threonine-dehydratase
MHITYDLPVAIEDILEAKKRLAGKIYKTGMPRSNYFSERCKGEIFLKFENMQRTGSFKIRGAFNKLSSLTEAEKRKGVVACSAGNHAQGVSLSCAMLGIDGKVVMPKGAPKSKVAATCDYSAEVVLHGDNFNDTIAKVSEIVETEGRIFIPPYDDPKVIAGQGTIGLEIMEDLYDVDNVIVPIGGGGLIAGIAIAIKSINPTIKVIGVQAENVHGMAASYYAGEITTHRTTGTLADGCDVSRPGNLTYEIVRELVDDIVLVSEDEIRNSMIALIQRNKVITEGAGALACAALLSEKLDSHIQNRKTVSIISGGNIDLSRVSQITGLVDA
>CP019189.1|AUM38965.1|623815_625147_+|threonine/serine-transporter-TdcC
MSTTDSIVSSQAKQSSWRKSDTTWTLGLFGTAIGAGVLFFPIRAGFGGLIPILLMLVLAYPIAFYCHRALARLCLSGSNPSGNITETVEEHFGKTGGVVITFLYFFAICPLLWIYGVTITNTFMTFWENQLQMPALNRGFVALFLLLLMAFVIWFGKDLMVKVMSYLVWPFIASLVLISLSLIPYWNSAVIDQVDLSNIALTGHDGILVTVWLGISIMVFSFNFSPIVSSFVVSKREEYEKEFGREFTERKCSQIISRASMLMVAVVMFFAFSCLFTLSPQNMADAKAQNIPVLSYLANHFASLSGTKSTFATVLEYGASIIALVAIFKSFFGHYLGTLEGLNGLVLKFGYKGDKTKVSMGKLNTISMIFIMGSTWVVAYANPNILDLIEAMGAPIIASLLCLLPMYAIRKAPSLAKYRGRLDNVFVTLIGLLTILNIVYKLF
>CP019189.1|AUM38966.1|625213_626422_+|propionate/acetate-kinase
MNEFPVVLVINCGSSSIKFSVLDVATCDVLMAGIADGMNTENAFLSINGDKPIHLAHSNYEDALKAITFELEKRDLTDSVALIGHRIAHGGELFTQSVIITDEIIDNIRRVSPLAPLHNYANLSGIDAARHLFPAVRQVAVFDTSFHQTLAPEAYLYGLPWEYFSSLGVRRYGFHGTSHRYVSRRAYELLDLDEKNSGLIVAHLGNGASICAVRNGQSVDTSMGMTPLEGLMMGTRSGDVDFGAMAWIAKETGQTLSDLERVVNKESGLLGISGLSSDLRVLEKAWHEGHERARLAIKTFVHRIARHIAGHAASLHRLDGIIFTGGIGENSVLIRQLVIEHLGVLGLTLDVEMNKQPNSHGERIISANPSQVICAVIPTNEEKMIALDAIHLGNVKAPVEFA
>CP019189.1|AUM38967.1|626455_628750_+|formate-acetyltransferase
MKVNIDTSDMLYAEAWRDFKGTDWKEEINVRDFIQHNYTPYEGDESFLADATPATTALWEKVMAGIRIENATHAPVDFDTNIATTITAHDAGYIEKDLEKIVGLQTDKPLKRALHPFGGVNMIKSSFHAYGREMDADFEYTFTDLRKTHNQGVFDVYSPDMLRCRKSGVLTGLPDGYGRGRIIGDYRRVALYGIRYLVRERELQFADLQSNLERGQNLEATIRLREELAEHRRALLQMQEMAAKYGYDISRPARNAQEAVQWLYFAYLAAVKSQNGGAMSLGRTASFLDIYIERDFNAGLLTEQQAQELIDHFIMKIRMVRFLRTPEFDSLFSGDPIWATEVIGGMGLDGRTLVTKNSFRYLHTLHTMGPAPEPNLTILWSEALPVAFKKYAAQVSIVTSSLQYENDDLMRTDFNSDDYAIACCVSPMVIGKQMQFFGARANLAKTLLYAINGGVDEKLKIQVGPKTAPLTDEVLDYDAVMESLDHFMDWLAVQYISALNIIHYMHDKYSYEASLMALHDRDVYRTMACGIAGLSVAADSLSAIRYAQVKPIRNENGLAIDFAIEGEYPQYGNNDERVDSIACDLVKRFMQKISVLPTYRNAVPTQSILTITSNVVYGQKTGNTPDGRRAGTPFAPGANPMHGRDRKGAVASLTSVAKLPFTYAKDGISYTFSIVPAALGKEDAVRKTNLVGLLDGYFHHEAQVEGGQHLNVNVMNREMLLDAIEHPENYPNLTIRVSGYAVRFNALTREQQQDVISRTFTQAM
>CP019189.1|AUM38968.1|628819_630184_+|L-serine-ammonia-lyase
MISAFDIFKIGIGPSSSHTVGPMNAGKCFIDRLIDSGDLPRTTRITVDLYGSLSLTGKGHATDTAIIMGLAGNTPQDVNIDSIPAFIQEVARSSRLSVAGGAHVVDFPVADSILFHAETLARHENGMRITAWNGQTPLLHKTYYSIGGGFIVEEERFGQSHDVEKSVPYDFHSASELLTLCERQGLSVSGLMMQNELALRSKEQIDAGFARIWQVMATGIERGMNTEGVLPGPLNVPRRAVALRRLLVSSDNLSRDPMNVIDWINMFALAVSEENAAGGRVVTAPTNGACGIIPAVLAYYDKFRRPVNANSIARYLLSAGAIGMLYKMNASISGAEVGCQGEVGVACSMAAAGLTELLGGSPAQVCIAAEIAMEHNLGLTCDPVAGQVQIPCIERNAINAVKAVNAARMALRRTSEPRVSLDKVIETMYETGKDMNDKYRETSRGGLAIKVVCG
>CP019189.1|AUM42935.1|630499_631831_+|hypothetical-protein
MESASNTSVILDASAPARRAGMTESEWREAIKFDSTDTGWVIMSIGMAIGAGIVFLPVQVGLMGLWVFLLSSIIGYPAMYLFQRLFINTLAESPECKDYPSVISGYLGKNWGILLGALYFVMLVIWMFVYSTAITNDSASYLHTFGVTEGLLSDSPFYGLVLICILVAISSRGEKLLFKISTGMVLTKLLVVAALGVSMVGMWHLYNIGALPPMALLIKNAIITLPFTLTSILFIQTLSPMVISYRSREKSIEVARHKALRAMNIAFGVLFVTVFFYAVSFTLAMGHDEAVKAYEQNISALAIAAQFISGDGAGWVKVVSVILNIFAVMTAFFGVYLGFREATQGIVMNILRRKMPAEKIKENLVQRGIMIFAILLAWSAIVLNAPVLSFTSICSPIFGMVGCLIPAWLVYKVPALHKYKGASLYLIIITGLLLCVSPFLAFS
>CP019189.1|AUM38969.1|631856_633167_+|hypothetical-protein
MFESKINPLWQSFILAVQEEVKPALGCTEPISLALAAAAAAAELDGTVERIDAWVSPNLMKNGMGVTVPGTGMVGLPIAAALGALGGNAKAGLEVLKDASAKAVADAKAMLAAGHVAVMLQEPCNDILFSRAKVYRGDSWACVTIVGDHTNIVRIETDKGVVFTQADNAQEEEKTSPLGVLSHTSLEEILAFVNAVPFDAIRFILDAARLNGALSQEGLRGSWGLHIGSTLAKQCDRGLLAKDLSTAILIRTSAASDARMGGATLPAMSNSGSGNQGITATVPVMVVAEHVGADDERLARALMLSHLSAIYIHHQLPRLSALCAATTAAMGAAAGMAWLIDGRYDTIAMAISSMIGDVSGMICDGASNSCAMKVSTSASAAWKAVLMALDDTAVTGNEGIVAHNVEQSISNLCSLACRSMQQTDKQIIEIMASKAH
>CP019189.1|AUM38970.1|633279_633444_-|hypothetical-protein
MSKKSAKKRQPVVKPAVQEAMSATVPLGYEEMLTELEAIVADAEARLAEEEAAA
>CP019189.1|AUM38971.1|633467_634169_-|hypothetical-protein
MITTRTAKQCGQADYGWLQARYTFSFGHYFDPTLLGYASLRVLNQEVLAPGASFQPRTYPKVDILNLILDGEAEYRDSDGNHVQAKAGEALLLAAQPGISYSEHNLSKVKPLTRMQLWLDACPERENALVQKIPLLAAQQQLLASPDGEQNSLQLRQQVWVHHITLEKGESLNFQLHGPRAYLQSIHGTFHALTHNEEREALTCGDGAFIRDEPNITLVADTPLRALLVDLPV

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Crispr_ID: CP019189_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP019189_2

979510-979843

TypeI-E

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAACCG	PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRT

5 spacers

cas3,cas8e

The CRISPR arrays of CP019189_2

>merge|CP019189|2|979510-979843|PILER-CR,CRISPRCasFinder,CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCGCGATTTGTATTGATTAATTTTGTCAAGATTGTGTGTTCCCCGCGCCAGCGGGGATAAACCGAAATCGACTACGGCGGGCGCAAACAATACACGGTGTTCCCCGCGCCAGCGGGGATAAACCGGCGCAGGCCGGTATTGATTGCGAATTGCCACAGTGTTCCCCGCGCCAGCGGGGATAAACCGGGGATCGCGCTGGCGGTCGCATCCGTTGCCGTGTGTTCCCCGCGTCAGCGGGGATAAACCGTACCAACAATTCAGCGTTACGCCAACGGTAACGTGTTCCCCGCGCCAACAAGGATAGCCGT

>CP019189|2|2|979510-979782|PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGATTTGTATTGATTAATTTTGTCAAGATTGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAATCGACTACGGCGGGCGCAAACAATACACG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGCAGGCCGGTATTGATTGCGAATTGCCACA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGATCGCGCTGGCGGTCGCATCCGTTGCCGT
GTGTTCCCCGCGTCAGCGGGGATAAACCG

>CP019189|2|1|979510-979843|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGATTTGTATTGATTAATTTTGTCAAGATTGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAATCGACTACGGCGGGCGCAAACAATACACG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGCAGGCCGGTATTGATTGCGAATTGCCACA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGATCGCGCTGGCGGTCGCATCCGTTGCCGT
GTGTTCCCCGCGTCAGCGGGGATAAACCG	TACCAACAATTCAGCGTTACGCCAACGGTAAC
GTGTTCCCCGCGCCAACAAGGATAGCCGT

>CP019189|2|1|979510-979843|CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGATTTGTATTGATTAATTTTGTCAAGATTGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAATCGACTACGGCGGGCGCAAACAATACACG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGCAGGCCGGTATTGATTGCGAATTGCCACA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGATCGCGCTGGCGGTCGCATCCGTTGCCGT
GTGTTCCCCGCGTCAGCGGGGATAAACCG	TACCAACAATTCAGCGTTACGCCAACGGTAAC
GTGTTCCCCGCGCCAACAAGGATAGCCGT

Protein	Signature genes	Signature genes Name	Protein_function
CP019189.1\|AUM39302.1\|987101_987344_-\|hypothetical-protein	unknown	unknown	unknown
CP019189.1\|AUM39304.1\|990105_991662_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
CP019189.1\|AUM39296.1\|979940_980738_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|224158
CP019189.1\|AUM39288.1\|970654_972889_+\|GTP-diphosphokinase	unknown	unknown	gnl\|CDD\|182797
CP019189.1\|AUM39297.1\|980825_981188_-\|6-carboxytetrahydropterin-synthase-QueD	unknown	unknown	gnl\|CDD\|238264
CP019189.1\|AUM39293.1\|975387_977025_+\|CTP-synthetase	unknown	unknown	gnl\|CDD\|235437
CP019189.1\|AUM39298.1\|981623_983423_+\|sulfite-reductase-[NADPH]-flavoprotein,-alpha-component	unknown	unknown	gnl\|CDD\|182862
CP019189.1\|AUM39300.1\|985210_985945_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
CP019189.1\|AUM39295.1\|978541_979213_+\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126
CP019189.1\|AUM39301.1\|986032_986986_-\|pathogenicity-island-1-effector-protein-SopD	unknown	unknown	gnl\|CDD\|185277
CP019189.1\|AUM39292.1\|974359_975160_+\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
CP019189.1\|AUM39291.1\|973601_973754_-\|fimbrial-assembly-protein	unknown	unknown	gnl\|CDD\|185169
CP019189.1\|AUM39287.1\|969307_970603_+\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase	unknown	unknown	gnl\|CDD\|237291
CP019189.1\|AUM39299.1\|983422_985135_+\|sulfite-reductase-subunit-beta	unknown	unknown	gnl\|CDD\|237402
CP019189.1\|AUM39289.1\|972973_973330_+\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|226136
CP019189.1\|AUM42952.1\|981116_981287_+\|6-pyruvoyl-tetrahydrobiopterin-synthase	unknown	unknown	unknown
CP019189.1\|AUM39290.1\|973295_973592_+\|plasmid-stabilization-protein-ParE	unknown	unknown	gnl\|CDD\|226194
CP019189.1\|AUM39286.1\|966493_969250_-\|two-component-sensor-histidine-kinase-BarA	unknown	unknown	gnl\|CDD\|236848
CP019189.1\|AUM39303.1\|987430_990094_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
CP019189.1\|AUM39294.1\|977107_978406_+\|enolase	unknown	unknown	gnl\|CDD\|234617

Protein	Function_ID	Function_description	E-value
CP019189.1\|AUM39304.1\|990105_991662_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	0
CP019189.1\|AUM39296.1\|979940_980738_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|224158	COG1237, COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only].	4.02249e-102
CP019189.1\|AUM39288.1\|970654_972889_+\|GTP-diphosphokinase	gnl\|CDD\|182797	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional.	0
CP019189.1\|AUM39297.1\|980825_981188_-\|6-carboxytetrahydropterin-synthase-QueD	gnl\|CDD\|238264	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS). Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids, as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is PTPS which catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin. The functional enzyme is a hexamer of identical subunits.	2.66978e-58
CP019189.1\|AUM39293.1\|975387_977025_+\|CTP-synthetase	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
CP019189.1\|AUM39298.1\|981623_983423_+\|sulfite-reductase-[NADPH]-flavoprotein,-alpha-component	gnl\|CDD\|182862	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit.	0
CP019189.1\|AUM39300.1\|985210_985945_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	8.84882e-138
CP019189.1\|AUM39295.1\|978541_979213_+\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	2.27998e-154
CP019189.1\|AUM39301.1\|986032_986986_-\|pathogenicity-island-1-effector-protein-SopD	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
CP019189.1\|AUM39292.1\|974359_975160_+\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	1.84061e-158
CP019189.1\|AUM39291.1\|973601_973754_-\|fimbrial-assembly-protein	gnl\|CDD\|185169	PRK15261, PRK15261, fimbrial protein SteA; Provisional.	2.47001e-21
CP019189.1\|AUM39287.1\|969307_970603_+\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase	gnl\|CDD\|237291	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD.	0
CP019189.1\|AUM39299.1\|983422_985135_+\|sulfite-reductase-subunit-beta	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0
CP019189.1\|AUM39289.1\|972973_973330_+\|transcriptional-regulator	gnl\|CDD\|226136	COG3609, COG3609, Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain [Transcription].	6.12601e-20
CP019189.1\|AUM39290.1\|973295_973592_+\|plasmid-stabilization-protein-ParE	gnl\|CDD\|226194	COG3668, ParE, Plasmid stabilization system protein [General function prediction only].	4.79136e-12
CP019189.1\|AUM39286.1\|966493_969250_-\|two-component-sensor-histidine-kinase-BarA	gnl\|CDD\|236848	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional.	0
CP019189.1\|AUM39303.1\|987430_990094_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	0
CP019189.1\|AUM39294.1\|977107_978406_+\|enolase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0

>CP019189.1|AUM39295.1|978541_979213_+|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWDKLSDREVSLFSILAKTKESDKWGAASSEDLLAVINRQDYTARHVVITGGEPCIHDLMPLTDLLEKSGFSCQIETSGTHEVRCTPNTWVTVSPKVNMRGGYDVLSQALERANEIKHPVGRVRDIEALDELLATLSDDKPRVIALQPISQKEDATRLCIETCIARNWRLSMQTHKYLNIA
>CP019189.1|AUM39294.1|977107_978406_+|enolase
MSKIVKVIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVGAVNGPIAQAILGKDAKDQAGIDKIMIDLDGTENKSNFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKGKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>CP019189.1|AUM39293.1|975387_977025_+|CTP-synthetase
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQLAVDIGREHALFMHLTLVPYLAAAGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISMKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIYEEANPAGEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVTVNIKLIDSQDVETRGVEILKYLDAILIPGGFGYRGVEGKIATARYARENNIPYLGICLGMQVALIEFARNVAGMDNANSTEFVPDCKYPVVALITEWRDEDGNVEVRSEKSDLGGTMRLGAQQCQLSDDSLVRQLYGASTIVERHRHRYEVNNMLLKQIEAAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAASEHQKRQAK
>CP019189.1|AUM39292.1|974359_975160_+|nucleoside-triphosphate-pyrophosphohydrolase
MTTNHQIDRLLTLMQRLRDPENGCPWDKEQTFASIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFGEISAGNSEEALVRWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCSNVGFDWTTLGPVVDKVYEEIDEVMFEARQAVVDQAKLEEEMGDLLFATVNMARHLGTKAELALQKANDKFERRFREVERIVAARGLEMTGVDLETMEEVWQEVKRQEIDL
>CP019189.1|AUM39291.1|973601_973754_-|fimbrial-assembly-protein
MKSSHFCKLAVTASLVMGIVSGAQAAGSNTAKITFLGNIVDSPCSITLVF
>CP019189.1|AUM39290.1|973295_973592_+|plasmid-stabilization-protein-ParE
MRTVKLTPKASEDLENIWHYGWLYFGEIQADRYINHLSEIFSIMSANNIGTPRPELGEYIYALPFERHIIYFIQSVTEVIVIRILSQNQDAGKHVNWL
>CP019189.1|AUM39289.1|972973_973330_+|transcriptional-regulator
MFLTYISFPVYSYVRFILTVEAVMARTMTVDLGDELREFIESLIESGDYRTQSEVIRESLRLLREKQAESRLQALRELLAEGLNSGEPQAWEKDAFLRKVKTGMIKPDENGKINAKGQ
>CP019189.1|AUM39288.1|970654_972889_+|GTP-diphosphokinase
MVAVRSAHINKAGEFDPKKWIASLGISSQQSCERLAETWAYCLQQTQGHPDADLLLWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKSIVTLIHGVRDMAAIRQLNATHNDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKEAPEDERVLAAKECTNIYAPLANRLGIGQLKWELEDYCFRYLHPAEYKRIAKLLHERRLDREHYIEEFVGHLRAEMKNEGVQAEVYGRPKHIYSIWRKMQKKHLAFDELFDVRAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTVEIQIRTKQMHEDAELGVAAHWKYKEGAASGGVRSGHEDRIAWLRKLIAWQEEMADSGEMLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVPFTYQLQMGDQVEIITQKQPNPSRDWLNPNLGYVTTSRGRSKIHAWFRKQDRDKNILAGRQILDDELAHLGISLKEAEKHLLPRYNFNELEELLAAIGGGDIRLNQMVNFLQSQFNKPSAEEQDAAALKQLQQKTYAPQNRRKDDGRVVVEGVGNLMHHIARCCQPIPGDEIVGFITQGRGISVHRADCEQLAELRSHAPERIVEAVWGESYSAGYSLVVRVQANDRSGLLRDITTILANEKVNVLGVASRSDIKQQIATIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLHGG
>CP019189.1|AUM39287.1|969307_970603_+|23S-rRNA-(uracil(1939)-C(5))-methyltransferase
MAQFYSAKRRVTTRQIITVKVNDLDSFGQGVARHNGKALFIPGLLPEESAEVILTEDKKQFARARVSRRLNDSPERETPRCPHFGVCGGCQQQHVSIALQQRSKSAALARLMKHEVNDIIAGEPWGYRRRARLSLNCLPDKPLQMGFRKAGSSDIVNVEQCPVLAPQLEALLPRIRACLASLHGTRHLGHVELVQAGSGTLMILRHTAPLSAADKEKLERFSHSEGLSLFLAPFSEILETVSGEAPWYDSHGLRLAFSPRDFIQVNEVVNQQMVARALEWLDVRAEDRVLDLFCGMGNFTLPLATRAASVVGVEGVPALVEKGRENAIRNGLHNVTFFHENLEEDVTKQPWAKNGFDKVLLDPARAGATGVMRHIIKLKPIRIVYVSCNPATLARDSEALVNAGYEVTRLAMLDMFPHTGHLESMVLFERM
>CP019189.1|AUM39286.1|966493_969250_-|two-component-sensor-histidine-kinase-BarA
MTNYSLRARMMILILAPTVLIGLLLSIFFVVHRYNDLQRQLEDAGASIIEPLAVSSEYGMNLQNRESIGQLISVLHRRHSDIVRAISVYDDHNRLFVTSNFHLDPSQMQLPAGAPFPRRLSVDRHGDIMILRTPIISESYSPDESAIADAKNTKNMLGYVALELDLKSVRLQQYKEIFISSVMMLFCIGIALIFGWRLMRDVTGPIRNMVNTVDRIRRGQLDSRVEGFMLGELDMLKNGINSMAMSLAAYHEEMQHNIDQATSDLRETLEQMEIQNVELDLAKKRAQEAARIKSEFLANMSHELRTPLNGVIGFTRLTLKTELNPTQRDHLNTIERSANNLLAIINDVLDFSKLEAGKLILESIPFPLRNTLDEVVTLLAHSSHDKGLELTLNIKNDVPDNVIGDPLRLQQVITNLVGNAIKFTESGNIDILVEKRALSNTKVQIEVQIRDTGIGIPERDQSRLFQAFRQADASISRRHGGTGLGLVITQKLVNEMGGDISFHSQPNRGSTFWFHINLDLNPNVIIDGPSTACLAGKRLAYVEPNATAAQCTLDLLSDTPVEVVYSPTFSALPLAHYDIMILSVPVTFREPLTMQHERLAKAASMTDFLLLALPCHAQINAEKLKQGGAAACLLKPLTSTRLLPALTEYCQLNHHPEPLLMDTSKITMTVMAVDDNPANLKLIGALLEDKVQHVELCDSGHQAVDRAKQMQFDLILMDIQMPDMDGIRACELIHQLPHQQQTPVIAVTAHAMAGQKEKLLSAGMNDYLAKPIEEEKLHNLLLRYKPGANVAARLMAPEPAEFIFNPNATLDWQLALRQAAGKPDLARDMLQMLIDFLPEVRNKIEEQLVGENPNGLVDLIHKLHGSCGYSGVPRMKNLCQLIEQQLRSGVHEEELEPEFLELLDEMDNVAREAKKILG
>CP019189.1|AUM39296.1|979940_980738_+|MBL-fold-metallo-hydrolase
MALRIRVLLENHKGVGADKSLKARPGLSLLVEDESTSILFDTGPDGSFMQNASAMGIDLSDVSAVVLSHGHYDHCGGVPWLPDNSRIICHPDIARERYAAMTFLGITRKIKKLSCEVDYSRYRMMYTRDPLPIGENFIWSGEIPVVAPEAYGIFGGHDAEPDSILDEGVLIYQSAKGLVIITGCGHRGIANIVRHCQNITGIKRIYALVGGFHLRCASPLTLWRVRRFLQEQKPEKLCGCHCTGAWGRLWLPEITAPATGDVLRF
>CP019189.1|AUM39297.1|980825_981188_-|6-carboxytetrahydropterin-synthase-QueD
MSTTLYKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGEVDPHTGWIMDFADLKAAFKPTYDRLDHYYLNDIPGLSNPTSEVLAKWIWDQVKPVVPLLSAVMVKETCTAGCIYRGE
>CP019189.1|AUM42952.1|981116_981287_+|6-pyruvoyl-tetrahydrobiopterin-synthase
MPFRHVRQAVSGFKGEIFIQRGGHDELSGNKKTAVGYRKAHFLSLTKTILRLVTGN
>CP019189.1|AUM39298.1|981623_983423_+|sulfite-reductase-[NADPH]-flavoprotein,-alpha-component
MTTPAPLTGLLPLNPEQLARLQAATTDLTPEQLAWVSGYFWGVLNPRSGAVAVTPAPEGKMPGVTLISASQTGNARRVAEALRDDLLAANLNVTLVNAGDYKFKQIASEKRLVIVTSTQGEGEPPEEAVALHKFLFSKKAPKLENTAFAVFSLGDTSYEFFCQAGKDFDNKLAELGGERLLDRVDADVEYQAAASEWRARVVDVLKSRAPVAAPSQSVATGAVNDIHTSPYTKDAPLTATLAVNQKITGRDSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKEIVELLWLKGDEPVTVDGKTLPLAEALEWHFELTVNTANIVENYATLTRSESLLPLVGDKAQLQHYAATTPIVDMVRFSPAQLDAEALIGLLRPLTPRLYSIASSQAETENEVHVTVGVVRYDIEGRARAGGASSFLADRVEEEGEVRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQRAAEGAEGKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLNRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCGDARRMAADVEKALLEVIAEFGAMDIEAADEFLSELRVERRYQRDVY
>CP019189.1|AUM39299.1|983422_985135_+|sulfite-reductase-subunit-beta
MSEKHPGPLVVEGKLSDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAAQKLEPRHAMLLRCRLPGGVITTTQWQAIDKFAADNTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGATYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGLETFKAEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDNNWHLTLFIENGRILDYPGRPLKTGLLEIAKIHQGEFRITANQNLIIASVPESQKVKIETLARDHGLMNAVSAQRENSMACVSFPTCPLAMAEAERFLPSFTDKVEAILEKHGIPDEHIVMRVTGCPNGCGRAMLAEIGLVGKAPGRYNLHLGGNRIGSRIPRMYQENITESDILASLDELVGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDFWE
>CP019189.1|AUM39300.1|985210_985945_+|phosphoadenosine-phosphosulfate-reductase
MSQLDLNALNELPKVDRVLALAETNAQLETLTAEERVVWALENLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNDINKVEPMNRALKELKAQTWFAGLRREQSGSRAHLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>CP019189.1|AUM39301.1|986032_986986_-|pathogenicity-island-1-effector-protein-SopD
MPVTLSFGNHQNYTLNESRLAHLLSADKEKAIHMGGWDKVQDHFRAEKKDHALEVLHSIIHGQGRGEPGEMEVNVEDINKIYAFKRLQHLACPAHQDLFTIKLDASQTQFLLMVGDTVISQSNIKDILNISDDAVIESMSREERQLFLQICEVIGAKMTWHPELLQESISTLRKEVTGNAQIKTAVYEMMRPAEAPDHPLVEWQDLLTADEKSMLACINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHSYSPFAEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKLYLTHERSLHIGKDGCSRNILLT
>CP019189.1|AUM39302.1|987101_987344_-|hypothetical-protein
MRLYLNILTQVYIFFGNIYFSNNYYKFFRPFLLEEAIKEASSNAPCMRQNLKKTTICGESSTFCLNYRHHKGLPTINVLY
>CP019189.1|AUM39303.1|987430_990094_+|CRISPR-associated-helicase/endonuclease-Cas3
MSIYHYWGKSRRGEIDGGDDYHLLCWHSLDVAAVGYWMVINNIYFIDHYLKKLGIQDKEQAAQFFAWILCWHDIGKFAHSFQQLYRHEALNIFNEPTRHYEKIAHTTLGYVLWNSWLSECPELFPPSSLSVRKSKRVMALWMPVTTGHHGRPPEAIQELDHFRQQDKDAARDFLLRIKALFPLITLPESWDEDEGIDQFQQLSWFISAAVVLADWTGSASRYFPRTAEKMPVDTYWQQALAKAQTAITLFPSAANVSAFTGIETLFPFIQHPTPLQQKALELDINVDGAQLFILEDVTGAGKTEAALILAHRLMAAGKAQGLYFGLPTMATANAMFERMANTWLALYQPDSRPSLILAHSARRLMDRFNQSIWSVTLSGTEEPDEAQPDSQGCAAWFADSNKKALLAEVGVGTLDQAMMAVMPFKHNNLRLLGLSNKILLADEIHACDAWMSRILEGLIERQASNGNATILLSATLSQQQRDKLVAAFSRGVRRSVQAPLLGHDDYPWLTQVTQTELISQRVDTRKEVERSVDIGWLHSEEACLERIGEAVEKGNCIAWIRNSVDDAIRIYRQLQLSKVVATENLLLFHSRFAFHDRQRIESQTLNLFGKQSGAQRAGKVIIATQVIEQSLDIDCDEMISDLAPVDLLIQRAGRLQRHIRDRNGLVKKSGQDERETPVLRILAPEWDDAPRENWLSSAMRNSAYVYPDHGRMWLTQRILREQGTIRMPQSARLLIESVYGENVNMPVGFAKTEQLQKGKFYCDRAFARQMLLNFAPGYCAEISDSLPEKMSTRLAEESVTLWLAKIVDGVVTPYASGEHAWEMSVLRVRQSWWDKHKGEFERLDGEPLRKWCAQQHQDKDFATVIVVTDFAACGYSANEGLIGMMGE
>CP019189.1|AUM39304.1|990105_991662_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MDNFSLLTTPWLPVRFKDGSTGKLAPVDLADENVVDIAATRADLQGAAWQFLLGLLQCSIAPKRYKNWEDIWFDGLHADALHKALAPLEHAFQFGAETPSFMQDFEPLTGEKVSIASLLPEIPGAQTTKFNKDHFIKRGVTERFCPHCAALALFSLQLNAPAGGKGYRTGLRGGGPLTTLVELQEYQGERQTPLWRKLWLNVMPQDVADLPLSDQCDAAVFPWLAATRTSEQANAVTTPDQVDKLQAYWGMPRRIRLDFATLQSGCCDICGAESDELLGFMTVKNYGVNYDGWRHPLTPYRAPVKDQNAFFSVKPQPGGLIWRDWLGLSQNNHTEANYESPAQVVKVFNARRLRDVKAGVWGFGADFDNMKIRCWYEHHFPLLMTEGLIPDLRKATQTATRLLSLLRGALKEAWFANAKDARGDFSFIDIDFWNLTQGRFLNLIHDLENGHKPDERLNKWQRELWLFTRCYFDDHVFTNPYEGSDLERIMKARKKYFTSSAEKQSAKAAKAKKQEAAE

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Crispr_ID: CP019189_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP019189_3

995986-998273

TypeI-E

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRT

37 spacers

cas2,cas1,cas6e,cas5,cse2gr11,cas8e,cas3

The CRISPR arrays of CP019189_3

>merge|CP019189|3|995986-998273|CRISPRCasFinder,CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCGGTTTCCAAACTTTTATATTTCTGTGGACAATAGTGTTCCCCGCGCCAGCGGGGATAAACCGTCGGCAGCTACTTCGGTGTTAGGCGGCATCCAGTGTTCCCCGCGCCAGCGGGGATAAACCGCGAGCTCGTCAGGGAGGGAAAGGTTATCCGGGGTGTTCCCCGCGCCAGCGGGGATAAACCGAAAACAACATTAATAAAAACCGGTTTAAGCGCGTGTTCCCCGCGCCAGCGGGGATAAACCGGAGTTGTTTTTCTTGCGGAGCAGGACGGCGTAGTGTTCCCCGCGCCAGCGGGGATAAACCGATCCGATCCACATCAGCAGCCAGCTCTTTAAAGTGTTCCCCGCGCCAGCGGGGATAAACCGACCAAAGCTCGATATCAGTCAATTATGGCCAGGTGTTCCCCGCGCCAGCGGGGATAAACCGGTTTATCTCTCCGTTATGTGTCGGACACCAAAGTGTTCCCCGCGCCAGCGGGGATAAACCGCCGGTCACGATTGTTCACCCCAAAAGCGGACAGTGTTCCCCGCGCCAGCGGGGATAAACCGCACTCTGCGTAATGGCAAATTCCAATTCTTTCGTGTTCCCCGCGCCAGCGGGGATAAACCGCAGACAGTAAAAGTGAGGCAGCAGGGCGGAGCGTGTTCCCCGCGCCAGCGGGGATAAACCGGCATCAAGCCCCCCATCCGCCCGGGTTGAGAGGTGTTCCCCGCGCCAGCGGGGATAAACCGAATTCCTCGATAACGATCTGCACCAGGTTGAAGTGTTCCCCGCGCCAGCGGGGATAAACCGCCGTATCGGGTGTTTAATTTTTACGTGAGAGAGTGTTCCCCGCGCCAGCGGGGATAAACCGAGCGATACAATTCAGGAGTTCCAATTCTCTGTGTGTTCCCCGCGCCAGCGGGGATAAACCGTTAACGTAACAGTGTATTTTTTGTCCCCGTTGGTGTTCCCCGCGCCAGCGGGGATAAACCGGTCAGAAATATTAGTTACCTCGGCGGCGTTAGCGTGTTCCCCGCGCCAGCGGGGATAAACCGGCGATCACCTGTCGCTGGCGGAAATCAATAGCGTGTTCCCCGCGCCAGCGGGGATAAACCGTTGACACAATAGCGAAATCAATTACTGAAAAGGTGTTCCCCGCGCCAGCGGGGATAAACCGGACGCCAATTATACATTGGCTCTATATGAATTGTGTTCCCCGCGCCAGCGGGGATAAACCGCTCCCGGCCGAGGCCGTGACGGTGAAACAGAAGTGTTCCCCGCGCCAGCGGGGATAAACCGGTACAGAAAAAAGAGGCGTCGCATGTGGCGATGTGTTCCCCGCGCCAGCGGGGATAAACCGGGCCTCACAGCGGCGCCCGCTGGTCACGACCAGTGTTCCCCGCGCCAGCGGGGATAAACCGCCCGCCGTCTGTCACACCTGTTATGTAATTGTGTGTTCCCCGCGCCAGCGGGGATAAACCGGCAAAAGGATCGAACAAAAAACCTGTGGTCATGTGTTCCCCGCGCCAGCGGGGATAAACCGCCGTTACCGTTGTTCACGTCCGGTTCGCTAATGTGTTCCCCGCGCCAGCGGGGATAAACCGTCTGTACACGACGTAACGACCACATCATTCAGGTGTTCCCCGCGCCAGCGGGGATAAACCGGCGACGAGCGCAACGCAGGTTACTGGCGTTGAGTGTTCCCCGCGCCAGCGGGGATAAACCTGCGGAGCAGGCTAGCGAACCACTCCAGGGCGAGTGTTCCCCGCGCCAGCGGGGATAAACCGTTTTCGCTCGCGCTCGTCCATCATTCCGCGCCGTGTTCCCCGCGCCAGCGGGGATAAACCGATAATCAGGTCGTTAATATTTTTTGTCTGCGCGTGTTCCCCGCGCCAGCGGGGATAAACCGGGGCAGAATTAACGGACGAACAGCGGCAGACAGTGTTCCCCGCGCCAGCGGGGATAAACCGACCGTTAAATCCTGGTCTACTACCCCGCCCACCGTGTTCCCCGCGCCAGCGGGGATAAACCGGGAGCGGGACGACAGCGAACCATCCGGAAAAAGTGTTCCCCGAGCCAGCGGGGATAAACCGCCAGACGACCTTCGGTGTCTTTAATCAGTTTCGTGTTCCCCGCGCCAGCGGGGATAAACCGCGATAACGGGCGGGCGTTTATACGTGCCCGCGGTGTTCCCCGCGCCAGCGGGGATAAACCGCAAAAGGCCGACGGTGTGTACACCTCTAAAAAGTGTTCCCCGCGTCAGCGGGGATAAACAC

>CP019189|3|2|995986-998273|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTTTCCAAACTTTTATATTTCTGTGGACAATA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCGGCAGCTACTTCGGTGTTAGGCGGCATCCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGAGCTCGTCAGGGAGGGAAAGGTTATCCGGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAAACAACATTAATAAAAACCGGTTTAAGCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GAGTTGTTTTTCTTGCGGAGCAGGACGGCGTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATCCGATCCACATCAGCAGCCAGCTCTTTAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACCAAAGCTCGATATCAGTCAATTATGGCCAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTTTATCTCTCCGTTATGTGTCGGACACCAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGGTCACGATTGTTCACCCCAAAAGCGGACA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CACTCTGCGTAATGGCAAATTCCAATTCTTTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGACAGTAAAAGTGAGGCAGCAGGGCGGAGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCATCAAGCCCCCCATCCGCCCGGGTTGAGAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATTCCTCGATAACGATCTGCACCAGGTTGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGTATCGGGTGTTTAATTTTTACGTGAGAGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGCGATACAATTCAGGAGTTCCAATTCTCTGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTAACGTAACAGTGTATTTTTTGTCCCCGTTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTCAGAAATATTAGTTACCTCGGCGGCGTTAGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGATCACCTGTCGCTGGCGGAAATCAATAGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGACACAATAGCGAAATCAATTACTGAAAAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GACGCCAATTATACATTGGCTCTATATGAATT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTCCCGGCCGAGGCCGTGACGGTGAAACAGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTACAGAAAAAAGAGGCGTCGCATGTGGCGAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGCCTCACAGCGGCGCCCGCTGGTCACGACCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCCGCCGTCTGTCACACCTGTTATGTAATTGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCAAAAGGATCGAACAAAAAACCTGTGGTCAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGTTACCGTTGTTCACGTCCGGTTCGCTAAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCTGTACACGACGTAACGACCACATCATTCAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGACGAGCGCAACGCAGGTTACTGGCGTTGA
GTGTTCCCCGCGCCAGCGGGGATAAACCT	GCGGAGCAGGCTAGCGAACCACTCCAGGGCGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTTTCGCTCGCGCTCGTCCATCATTCCGCGCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATAATCAGGTCGTTAATATTTTTTGTCTGCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGCAGAATTAACGGACGAACAGCGGCAGACA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACCGTTAAATCCTGGTCTACTACCCCGCCCACC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGAGCGGGACGACAGCGAACCATCCGGAAAAA
GTGTTCCCCGAGCCAGCGGGGATAAACCG	CCAGACGACCTTCGGTGTCTTTAATCAGTTTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGATAACGGGCGGGCGTTTATACGTGCCCGCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAAAAGGCCGACGGTGTGTACACCTCTAAAAA
GTGTTCCCCGCGTCAGCGGGGATAAACAC

>CP019189|3|2|995986-998273|CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTTTCCAAACTTTTATATTTCTGTGGACAATA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCGGCAGCTACTTCGGTGTTAGGCGGCATCCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGAGCTCGTCAGGGAGGGAAAGGTTATCCGGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAAACAACATTAATAAAAACCGGTTTAAGCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GAGTTGTTTTTCTTGCGGAGCAGGACGGCGTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATCCGATCCACATCAGCAGCCAGCTCTTTAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACCAAAGCTCGATATCAGTCAATTATGGCCAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTTTATCTCTCCGTTATGTGTCGGACACCAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGGTCACGATTGTTCACCCCAAAAGCGGACA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CACTCTGCGTAATGGCAAATTCCAATTCTTTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGACAGTAAAAGTGAGGCAGCAGGGCGGAGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCATCAAGCCCCCCATCCGCCCGGGTTGAGAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATTCCTCGATAACGATCTGCACCAGGTTGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGTATCGGGTGTTTAATTTTTACGTGAGAGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGCGATACAATTCAGGAGTTCCAATTCTCTGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTAACGTAACAGTGTATTTTTTGTCCCCGTTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTCAGAAATATTAGTTACCTCGGCGGCGTTAGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGATCACCTGTCGCTGGCGGAAATCAATAGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGACACAATAGCGAAATCAATTACTGAAAAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GACGCCAATTATACATTGGCTCTATATGAATT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTCCCGGCCGAGGCCGTGACGGTGAAACAGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTACAGAAAAAAGAGGCGTCGCATGTGGCGAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGCCTCACAGCGGCGCCCGCTGGTCACGACCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCCGCCGTCTGTCACACCTGTTATGTAATTGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCAAAAGGATCGAACAAAAAACCTGTGGTCAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGTTACCGTTGTTCACGTCCGGTTCGCTAAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCTGTACACGACGTAACGACCACATCATTCAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGACGAGCGCAACGCAGGTTACTGGCGTTGA
GTGTTCCCCGCGCCAGCGGGGATAAACCT	GCGGAGCAGGCTAGCGAACCACTCCAGGGCGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTTTCGCTCGCGCTCGTCCATCATTCCGCGCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATAATCAGGTCGTTAATATTTTTTGTCTGCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGCAGAATTAACGGACGAACAGCGGCAGACA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACCGTTAAATCCTGGTCTACTACCCCGCCCACC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGAGCGGGACGACAGCGAACCATCCGGAAAAA
GTGTTCCCCGAGCCAGCGGGGATAAACCG	CCAGACGACCTTCGGTGTCTTTAATCAGTTTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGATAACGGGCGGGCGTTTATACGTGCCCGCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAAAAGGCCGACGGTGTGTACACCTCTAAAAA
GTGTTCCCCGCGTCAGCGGGGATAAACAC

Protein	Signature genes	Signature genes Name	Protein_function
CP019189.1\|AUM39313.1\|1001928_1002534_+\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661
CP019189.1\|AUM39301.1\|986032_986986_-\|pathogenicity-island-1-effector-protein-SopD	unknown	unknown	gnl\|CDD\|185277
CP019189.1\|AUM39302.1\|987101_987344_-\|hypothetical-protein	unknown	unknown	unknown
CP019189.1\|AUM39316.1\|1003428_1004139_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
CP019189.1\|AUM39319.1\|1005644_1006406_+\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732
CP019189.1\|AUM39311.1\|999584_1000493_+\|sulfate-adenylyltransferase-subunit-2	unknown	unknown	gnl\|CDD\|235375
CP019189.1\|AUM39317.1\|1004138_1004618_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851
CP019189.1\|AUM39305.1\|991658_992219_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|187862
CP019189.1\|AUM39307.1\|994028_994679_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|273869
CP019189.1\|AUM39300.1\|985210_985945_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
CP019189.1\|AUM39306.1\|993300_994047_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776
CP019189.1\|AUM39318.1\|1004614_1005664_+\|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl\|CDD\|234884
CP019189.1\|AUM39312.1\|1000502_1001942_+\|sulfate-adenylyltransferase	unknown	unknown	gnl\|CDD\|235349
CP019189.1\|AUM39308.1\|994675_995596_+\|subtype-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
CP019189.1\|AUM39309.1\|995595_995889_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	cd09648_cas2_CAS-I-E	gnl\|CDD\|236930
CP019189.1\|AUM39315.1\|1003098_1003410_+\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156
CP019189.1\|AUM39310.1\|998287_999334_-\|Zn-dependent-exopeptidase-M28	unknown	unknown	gnl\|CDD\|182299
CP019189.1\|AUM39304.1\|990105_991662_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
CP019189.1\|AUM39303.1\|987430_990094_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
CP019189.1\|AUM39314.1\|1002551_1002908_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|371891

Protein	Function_ID	Function_description	E-value
CP019189.1\|AUM39313.1\|1001928_1002534_+\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	1.53293e-145
CP019189.1\|AUM39301.1\|986032_986986_-\|pathogenicity-island-1-effector-protein-SopD	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
CP019189.1\|AUM39316.1\|1003428_1004139_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	2.24126e-119
CP019189.1\|AUM39319.1\|1005644_1006406_+\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	1.7078e-146
CP019189.1\|AUM39311.1\|999584_1000493_+\|sulfate-adenylyltransferase-subunit-2	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
CP019189.1\|AUM39317.1\|1004138_1004618_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	1.27909e-104
CP019189.1\|AUM39305.1\|991658_992219_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	1.13504e-32
CP019189.1\|AUM39307.1\|994028_994679_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|273869	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1974 from Chlorobium tepidum, is found in the Ecoli subtype of CRISPR/Cas regions and is designated Cse3 (CRISPR/Cas Subtype Ecoli protein 3). The representative of this family from Thermus thermophilus HB8 (TTHB192) has been crystallized and found to have a structure consisting of two domains with opposing parallel beta-sheets known as a beta-sheet platform. This structure is similar to those found in the Sex-lethal protein and poly(A)-binding protein. This structure is consistent with an RNA-binding function.	1.41953e-75
CP019189.1\|AUM39300.1\|985210_985945_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	8.84882e-138
CP019189.1\|AUM39306.1\|993300_994047_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	2.18709e-48
CP019189.1\|AUM39318.1\|1004614_1005664_+\|tRNA-pseudouridine(13)-synthase-TruD	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
CP019189.1\|AUM39312.1\|1000502_1001942_+\|sulfate-adenylyltransferase	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
CP019189.1\|AUM39308.1\|994675_995596_+\|subtype-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	1.21084e-157
CP019189.1\|AUM39309.1\|995595_995889_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	1.1867e-62
CP019189.1\|AUM39315.1\|1003098_1003410_+\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	1.08865e-64
CP019189.1\|AUM39310.1\|998287_999334_-\|Zn-dependent-exopeptidase-M28	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
CP019189.1\|AUM39304.1\|990105_991662_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	0
CP019189.1\|AUM39303.1\|987430_990094_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	0
CP019189.1\|AUM39314.1\|1002551_1002908_+\|hypothetical-protein	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	4.85353e-49

>CP019189.1|AUM39309.1|995595_995889_+|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MSMVVVVTENVPPRLRGRLAVWLLEVRAGVYVGDTSKRIREMIWQQITQLGGVGNVVMAWATNTESGFEFQTWGENRRIPVDLDGLRLVSFLPVENQ
>CP019189.1|AUM39308.1|994675_995596_+|subtype-I-E-CRISPR-associated-endonuclease-Cas1
MTFVPLNPIPLKDRTSMIFLQYGQIDVLDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRVSHAAVRLASTVGTLLVWVGEAGVRVYSSGQPGGARADKLLYQAKLALDDDLRLKVVRKMYELRFREPPPARRSVEQLRGIEGSRVRATYALLAKQYGVKWHGRNYDPKDWEKGDVVNRCISAATSCLYGISEAAILAAGYAPAIGFIHSGKPLSFVYDIADIIKFESVVPKAFEIAARHPAEPDKEVRLACRDIFRSSKLTGKLIPLIEEVLAAGEIEPPQPAPDMLPPAIPEPESLGDSGHRGHG
>CP019189.1|AUM39307.1|994028_994679_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSRITLHTSELSPAQLLHLVERGEYVMHQWLWDLFPGGKERQFLYRREELQGAFRFFVLSQEQPAASAIFDVQTRPFAPTLSAGQTLRFNLRANPTICKNGKRHDLLMEAKRQRKTQGDSQDIWSYQQQAALEWLVRQGEQNGFTLREASVDAYRQQQIRREKSRQMIQFSSVDYTGVLVINDPALFLQRLAQGYGKSRAFGCGMMMIKPGEDA
>CP019189.1|AUM39306.1|993300_994047_+|type-I-E-CRISPR-associated-protein-Cas5/CasD
MSQYLVFQLHGPMASWGVDAPGEVRHSHELPSRSALLGLLAAALGIRRDEEERLNAFNRHYQFLLCASGNPRWARDYHTVQMPKEVRKARYFSRREELQDPELLSALISRRDYYTDAWWMIAVSATPDAPYTLAQLQAALQHPVFPLYLGRKSHPLALPLAPQLLEGRAPDALREAYRQYQDKFNALRLPLPRLQNECWWEGEHDGLTANKILRRRDMPLSRQQWLFGERSVNQGPWLSKEDACISQE
>CP019189.1|AUM39305.1|991658_992219_+|type-I-E-CRISPR-associated-protein-Cse2/CasB
MSIVQEDHKATLRKWHEDLQEKRGARASLRRSKTVNEACLSEGFHLLLMQTHSLWKNKAAWHVTALAITAVLAAHIKFIDERQSFATQLGQKKSGDNPVMSKLRFSRLSAVKTPDELLRQLRRAVQLLDGSVNLISLAEDIFRWCQEQDDLLSHHRRQQRPTEFLRIRWALEYYQAGDDDIDNEQD
>CP019189.1|AUM39304.1|990105_991662_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MDNFSLLTTPWLPVRFKDGSTGKLAPVDLADENVVDIAATRADLQGAAWQFLLGLLQCSIAPKRYKNWEDIWFDGLHADALHKALAPLEHAFQFGAETPSFMQDFEPLTGEKVSIASLLPEIPGAQTTKFNKDHFIKRGVTERFCPHCAALALFSLQLNAPAGGKGYRTGLRGGGPLTTLVELQEYQGERQTPLWRKLWLNVMPQDVADLPLSDQCDAAVFPWLAATRTSEQANAVTTPDQVDKLQAYWGMPRRIRLDFATLQSGCCDICGAESDELLGFMTVKNYGVNYDGWRHPLTPYRAPVKDQNAFFSVKPQPGGLIWRDWLGLSQNNHTEANYESPAQVVKVFNARRLRDVKAGVWGFGADFDNMKIRCWYEHHFPLLMTEGLIPDLRKATQTATRLLSLLRGALKEAWFANAKDARGDFSFIDIDFWNLTQGRFLNLIHDLENGHKPDERLNKWQRELWLFTRCYFDDHVFTNPYEGSDLERIMKARKKYFTSSAEKQSAKAAKAKKQEAAE
>CP019189.1|AUM39303.1|987430_990094_+|CRISPR-associated-helicase/endonuclease-Cas3
MSIYHYWGKSRRGEIDGGDDYHLLCWHSLDVAAVGYWMVINNIYFIDHYLKKLGIQDKEQAAQFFAWILCWHDIGKFAHSFQQLYRHEALNIFNEPTRHYEKIAHTTLGYVLWNSWLSECPELFPPSSLSVRKSKRVMALWMPVTTGHHGRPPEAIQELDHFRQQDKDAARDFLLRIKALFPLITLPESWDEDEGIDQFQQLSWFISAAVVLADWTGSASRYFPRTAEKMPVDTYWQQALAKAQTAITLFPSAANVSAFTGIETLFPFIQHPTPLQQKALELDINVDGAQLFILEDVTGAGKTEAALILAHRLMAAGKAQGLYFGLPTMATANAMFERMANTWLALYQPDSRPSLILAHSARRLMDRFNQSIWSVTLSGTEEPDEAQPDSQGCAAWFADSNKKALLAEVGVGTLDQAMMAVMPFKHNNLRLLGLSNKILLADEIHACDAWMSRILEGLIERQASNGNATILLSATLSQQQRDKLVAAFSRGVRRSVQAPLLGHDDYPWLTQVTQTELISQRVDTRKEVERSVDIGWLHSEEACLERIGEAVEKGNCIAWIRNSVDDAIRIYRQLQLSKVVATENLLLFHSRFAFHDRQRIESQTLNLFGKQSGAQRAGKVIIATQVIEQSLDIDCDEMISDLAPVDLLIQRAGRLQRHIRDRNGLVKKSGQDERETPVLRILAPEWDDAPRENWLSSAMRNSAYVYPDHGRMWLTQRILREQGTIRMPQSARLLIESVYGENVNMPVGFAKTEQLQKGKFYCDRAFARQMLLNFAPGYCAEISDSLPEKMSTRLAEESVTLWLAKIVDGVVTPYASGEHAWEMSVLRVRQSWWDKHKGEFERLDGEPLRKWCAQQHQDKDFATVIVVTDFAACGYSANEGLIGMMGE
>CP019189.1|AUM39302.1|987101_987344_-|hypothetical-protein
MRLYLNILTQVYIFFGNIYFSNNYYKFFRPFLLEEAIKEASSNAPCMRQNLKKTTICGESSTFCLNYRHHKGLPTINVLY
>CP019189.1|AUM39301.1|986032_986986_-|pathogenicity-island-1-effector-protein-SopD
MPVTLSFGNHQNYTLNESRLAHLLSADKEKAIHMGGWDKVQDHFRAEKKDHALEVLHSIIHGQGRGEPGEMEVNVEDINKIYAFKRLQHLACPAHQDLFTIKLDASQTQFLLMVGDTVISQSNIKDILNISDDAVIESMSREERQLFLQICEVIGAKMTWHPELLQESISTLRKEVTGNAQIKTAVYEMMRPAEAPDHPLVEWQDLLTADEKSMLACINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHSYSPFAEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKLYLTHERSLHIGKDGCSRNILLT
>CP019189.1|AUM39300.1|985210_985945_+|phosphoadenosine-phosphosulfate-reductase
MSQLDLNALNELPKVDRVLALAETNAQLETLTAEERVVWALENLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNDINKVEPMNRALKELKAQTWFAGLRREQSGSRAHLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>CP019189.1|AUM39310.1|998287_999334_-|Zn-dependent-exopeptidase-M28
MFSATRRFAVILALGVGFILPAQAASPAPGEIANTQARHIATFFPGRMTGSPAEMLSADYLRQQFTQMGYQSDIRTFNSRFIYTTKDNRKNWHNVTGSTVIAAHEGRVPQQIIIMAHLDTYAPQSDADVDANLGGLTLQGMDDNAAGLGVMLELAARLKDIPTHYGIRFIATSGEEEGKLGAENLLKRMSDAEKKNTLLVINLDNLIVGDKLYFNSGKNTPEAVRTLTRDRALAIARRYGIAANTNPGRNPSYPKGTGCCNDAEVFDKAGISVLSVEATNWNLGKKDGYQQRVKNASFPNGNSWHDVRLDNQQHIDKALPGRIERRSRDVVRIMLPLVKELAKAEKTS
>CP019189.1|AUM39311.1|999584_1000493_+|sulfate-adenylyltransferase-subunit-2
MDQKRLTHLRQLEAESIHIIREVAAEFANPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYAFRDRTANAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWRNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMVDDDRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESHAQTLPEIIEEMLVSTTSERQGRMIDRDQAGSMELKKRQGYF
>CP019189.1|AUM39312.1|1000502_1001942_+|sulfate-adenylyltransferase
MNTILAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTLQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYREETFARIREDYLTFAEQLPGDLDIRFVPLSALEGDNVAAQSANMRWYSGPTLLEVLETVDIQRAVDRQPMRFPVQYVNRPNLDFRGYAGTLASGSVKVGERIKVLPSGVESSVARIVTFDGDKEEAYAGEAITLVLNDDIDISRGDLLLAANETLAPARHAAIDVVWMAEQPLAPGQSYDVKLAGKKTRARIEAIRYQIDINNLTQRDVESLPLNGIGLVEMTFDEPLALDIYQQNPVTGGLIFIDRLSNVTVGAGMVRELDERGATPPVEYSAFELELNALVRRHFPHWDARDLLGDKHGAA
>CP019189.1|AUM39313.1|1001928_1002534_+|adenylyl-sulfate-kinase
MALHDENVVWHSHPVTVAAREQLHGHRGVVLWFTGLSGSGKSTVAGALEEALHQRGVSTYLLDGDNVRHGLCCDLGFSDADRQENIRRVGEVASLMADAGLIVLTAFISPHRAERQLVKERVGHDRFIEIYVNTPLAICEQRDPKGLYKKARAGELRNFTGIDAIYEAPDSPQVHLNGEQLVTNLVSQLLDLLRRRDIIRS
>CP019189.1|AUM39314.1|1002551_1002908_+|hypothetical-protein
MPGMVKVTGFNMRNSHNITFTRSDAFMVDDDATSAFPGAVVGFVSWLLALGIPFLLYGPNTLFFFLYTWPFFLALMPVSVIIGIALHLLVKGKILFSIMFTLLAVGALFGALFIWLLG
>CP019189.1|AUM39315.1|1003098_1003410_+|cell-division-protein-FtsB
MGKLTLLLLALLVWLQYSLWFGKNGIHDYSRVNDDVVAQQATNAKLKARNDQLFAEIDDLNGGQEAIEERARNELSMTKPGETFYRLVPDASKRAATAGQTHR
>CP019189.1|AUM39316.1|1003428_1004139_+|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MAATLLDVCAVVPAAGFGRRMQTECPKQYLSIGNKTILEHSVHALLAHPRVTRVVIAISPGDHRFAQLPLANHPQITVVDGGNERADSVLAGLQAVAKAQWVLVHDAARPCLHQDDLARLLAISENSRVGGILASPVRDTMKRGEPGKNAIAHTVERADLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPALVEGRADNIKVTRPEDLALAEFYLTRTIHQEKA
>CP019189.1|AUM39317.1|1004138_1004618_+|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLMKAAK
>CP019189.1|AUM39318.1|1004614_1005664_+|tRNA-pseudouridine(13)-synthase-TruD
MTEFDNLTWLHGKPQGSGLLKANPEDFVVVEDLGFTPDGEGEHILLRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDFSAFQLEGCKVLEYARHKRKLRLGALKGNAFTLVLREISDRRDVETRLQAIRDGGVPNYFGAQRFGIGGSNLQGALRWAQSNAPVRDRNKRSFWLSAARSALFNQIVHQRLKKPDFNQVVDGDALQLAGRGSWFVATSEELPELQRRVDEKELMITASLPGSGEWGTQRAALAFEQDAIAQETVLQSLLLREKVEASRRAMLLYPQQLSWNWWDDVTVELRFWLPAGSFATSVVRELINTMGDYAHIAE
>CP019189.1|AUM39319.1|1005644_1006406_+|5'/3'-nucleotidase-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFDNGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLNGYQHYDTAAAVTCALLRGLSREPLRTGRILNVNVPDLPLAQVKGIRVTRCGSRHPADKVIPQEDPRGNTLYWIGPPGDKYDAGPDTDFAAVDEGYVSVTPLHVDLTAHSAHDVVSDWLDSVGVGTQW

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP019189_3	3.10\|996564\|32\|CP019189\|CRISPRCasFinder,CRT	996564-996595	32	NZ_LN890526	Salmonella enterica subsp. enterica serovar Weltevreden strain 2511STDY5712385 plasmid 3, complete sequence	41461-41492	0	1.0
CP019189_3	3.32\|997907\|32\|CP019189\|CRISPRCasFinder,CRT	997907-997938	32	CP053320	Salmonella enterica subsp. arizonae serovar 41:z4,z23:- strain 2016K-0011 plasmid unnamed, complete sequence	42567-42598	4	0.875
CP019189_2	2.4\|979722\|32\|CP019189\|PILER-CR,CRISPRCasFinder,CRT	979722-979753	32	NZ_CP024424	Paracoccus yeei strain TT13 plasmid pTT13-2, complete sequence	112052-112083	5	0.844
CP019189_2	2.4\|979722\|32\|CP019189\|PILER-CR,CRISPRCasFinder,CRT	979722-979753	32	NZ_CP020440	Paracoccus yeei strain FDAARGOS_252 plasmid unnamed2, complete sequence	224971-225002	5	0.844
CP019189_2	2.4\|979722\|32\|CP019189\|PILER-CR,CRISPRCasFinder,CRT	979722-979753	32	NZ_CP044082	Paracoccus yeei strain FDAARGOS_643 plasmid unnamed4, complete sequence	90792-90823	5	0.844
CP019189_3	3.30\|997785\|32\|CP019189\|CRISPRCasFinder,CRT	997785-997816	32	JN672684	Enterobacteria phage F20, partial genome	37715-37746	5	0.844
CP019189_2	2.4\|979722\|32\|CP019189\|PILER-CR,CRISPRCasFinder,CRT	979722-979753	32	NZ_CP031080	Paracoccus yeei strain CCUG 32053 plasmid pYEE2, complete sequence	271400-271431	6	0.812
CP019189_3	3.30\|997785\|32\|CP019189\|CRISPRCasFinder,CRT	997785-997816	32	NC_049845	Klebsiella phage PhiKpNIH-2, complete genome	5047-5078	6	0.812
CP019189_3	3.30\|997785\|32\|CP019189\|CRISPRCasFinder,CRT	997785-997816	32	MK931442	Klebsiella phage Sin4, complete genome	12746-12777	6	0.812
CP019189_2	2.1\|979539\|32\|CP019189\|PILER-CR,CRISPRCasFinder,CRT	979539-979570	32	AJ344259	Sulfolobus virus SIRV-2 genomic DNA	29744-29775	7	0.781
CP019189_2	2.4\|979722\|32\|CP019189\|PILER-CR,CRISPRCasFinder,CRT	979722-979753	32	NC_008826	Methylibium petroleiphilum PM1 plasmid RPME01, complete sequence	343727-343758	7	0.781
CP019189_2	2.4\|979722\|32\|CP019189\|PILER-CR,CRISPRCasFinder,CRT	979722-979753	32	NC_009621	Sinorhizobium medicae WSM419 plasmid pSMED02, complete sequence	654402-654433	7	0.781
CP019189_3	3.4\|996198\|32\|CP019189\|CRISPRCasFinder,CRT	996198-996229	32	MK448714	Streptococcus phage Javan241, complete genome	7328-7359	7	0.781
CP019189_3	3.6\|996320\|32\|CP019189\|CRISPRCasFinder,CRT	996320-996351	32	MK416008	Klebsiella phage ST405-OXA48phi1.3, complete genome	8038-8069	7	0.781
CP019189_3	3.7\|996381\|32\|CP019189\|CRISPRCasFinder,CRT	996381-996412	32	KJ803031	Dinoroseobacter phage vBDshPR2C, complete genome	12107-12138	7	0.781
CP019189_3	3.18\|997053\|32\|CP019189\|CRISPRCasFinder,CRT	997053-997084	32	NZ_CP043441	Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence	1096435-1096466	7	0.781
CP019189_3	3.21\|997236\|32\|CP019189\|CRISPRCasFinder,CRT	997236-997267	32	NZ_CP054841	Acidovorax sp. 16-35-5 plasmid unnamed1, complete sequence	173164-173195	7	0.781
CP019189_3	3.30\|997785\|32\|CP019189\|CRISPRCasFinder,CRT	997785-997816	32	MN101222	Klebsiella phage KOX9, complete genome	4022-4053	7	0.781
CP019189_3	3.30\|997785\|32\|CP019189\|CRISPRCasFinder,CRT	997785-997816	32	MN395285	Klebsiella phage PhiKpNIH-10, complete genome	47499-47530	7	0.781
CP019189_3	3.30\|997785\|32\|CP019189\|CRISPRCasFinder,CRT	997785-997816	32	KY575286	UNVERIFIED: Klebsiella phage SH-Kp 160016, complete genome	10222-10253	7	0.781
CP019189_3	3.30\|997785\|32\|CP019189\|CRISPRCasFinder,CRT	997785-997816	32	MH633486	Klebsiella phage NJS3, complete genome	12271-12302	7	0.781
CP019189_3	3.30\|997785\|32\|CP019189\|CRISPRCasFinder,CRT	997785-997816	32	MK618657	Klebsiella phage Sanco, complete genome	11812-11843	7	0.781
CP019189_3	3.30\|997785\|32\|CP019189\|CRISPRCasFinder,CRT	997785-997816	32	NC_049842	Klebsiella phage vB_KpnS_15-38_KLPPOU149, complete genome	24549-24580	7	0.781
CP019189_3	3.30\|997785\|32\|CP019189\|CRISPRCasFinder,CRT	997785-997816	32	LR757892	Klebsiella phage vB_KpnS_2811 genome assembly, chromosome: 1	16590-16621	7	0.781
CP019189_3	3.30\|997785\|32\|CP019189\|CRISPRCasFinder,CRT	997785-997816	32	MF415412	Klebsiella phage KPN N141, complete genome	24560-24591	7	0.781
CP019189_3	3.30\|997785\|32\|CP019189\|CRISPRCasFinder,CRT	997785-997816	32	MF612072	Klebsiella phage MezzoGao, complete genome	47872-47903	7	0.781
CP019189_3	3.30\|997785\|32\|CP019189\|CRISPRCasFinder,CRT	997785-997816	32	MT894005	Klebsiella phage MMBB, complete genome	14709-14740	7	0.781
CP019189_3	3.30\|997785\|32\|CP019189\|CRISPRCasFinder,CRT	997785-997816	32	MG552615	Klebsiella virus GML-KpCol1, complete genome	29536-29567	7	0.781
CP019189_3	3.30\|997785\|32\|CP019189\|CRISPRCasFinder,CRT	997785-997816	32	MK931445	Klebsiella phage Shelby, complete genome	12464-12495	7	0.781
CP019189_3	3.30\|997785\|32\|CP019189\|CRISPRCasFinder,CRT	997785-997816	32	JF501022	Klebsiella phage KP36, complete genome	13458-13489	7	0.781
CP019189_3	3.30\|997785\|32\|CP019189\|CRISPRCasFinder,CRT	997785-997816	32	KP658157	Klebsiella phage 1513, complete genome	14165-14196	7	0.781
CP019189_3	3.30\|997785\|32\|CP019189\|CRISPRCasFinder,CRT	997785-997816	32	MH445453	Klebsiella phage NJS1, complete genome	12156-12187	7	0.781
CP019189_3	3.30\|997785\|32\|CP019189\|CRISPRCasFinder,CRT	997785-997816	32	NC_028760	Klebsiella phage KLPN1, complete genome	11954-11985	7	0.781
CP019189_3	3.30\|997785\|32\|CP019189\|CRISPRCasFinder,CRT	997785-997816	32	NC_049848	Klebsiella phage KP1801, complete genome	44390-44421	7	0.781
CP019189_3	3.30\|997785\|32\|CP019189\|CRISPRCasFinder,CRT	997785-997816	32	MH633484	Klebsiella phage TAH8, complete genome	12465-12496	7	0.781
CP019189_3	3.30\|997785\|32\|CP019189\|CRISPRCasFinder,CRT	997785-997816	32	NC_048043	Klebsiella phage NJS2, complete genome	13062-13093	7	0.781
CP019189_3	3.30\|997785\|32\|CP019189\|CRISPRCasFinder,CRT	997785-997816	32	MK931443	Klebsiella phage Sweeny, complete genome	13249-13280	7	0.781
CP019189_3	3.30\|997785\|32\|CP019189\|CRISPRCasFinder,CRT	997785-997816	32	NC_049838	Klebsiella phage KL, complete genome	21132-21163	7	0.781
CP019189_3	3.30\|997785\|32\|CP019189\|CRISPRCasFinder,CRT	997785-997816	32	MH844531	Klebsiella phage GH-K3, complete genome	37090-37121	7	0.781
CP019189_3	3.30\|997785\|32\|CP019189\|CRISPRCasFinder,CRT	997785-997816	32	NC_048044	Klebsiella phage NJR15, complete genome	12303-12334	7	0.781
CP019189_3	3.30\|997785\|32\|CP019189\|CRISPRCasFinder,CRT	997785-997816	32	MG894052	Klebsiella phage JY917, complete genome	33612-33643	7	0.781
CP019189_3	3.30\|997785\|32\|CP019189\|CRISPRCasFinder,CRT	997785-997816	32	NC_048126	Klebsiella phage TSK1, complete genome	10201-10232	7	0.781
CP019189_3	3.30\|997785\|32\|CP019189\|CRISPRCasFinder,CRT	997785-997816	32	MK931444	Klebsiella phage Skenny, complete genome	12271-12302	7	0.781
CP019189_3	3.30\|997785\|32\|CP019189\|CRISPRCasFinder,CRT	997785-997816	32	NC_048143	Klebsiella phage KpKT21phi1, complete genome	23737-23768	7	0.781
CP019189_3	3.30\|997785\|32\|CP019189\|CRISPRCasFinder,CRT	997785-997816	32	NC_028774	Klebsiella phage Sushi, complete genome	4177-4208	7	0.781
CP019189_3	3.30\|997785\|32\|CP019189\|CRISPRCasFinder,CRT	997785-997816	32	NC_049840	Klebsiella phage vB_KpnS_FZ10, complete genome	12716-12747	7	0.781
CP019189_3	3.30\|997785\|32\|CP019189\|CRISPRCasFinder,CRT	997785-997816	32	NC_049844	Klebsiella phage 13, complete genome	19558-19589	7	0.781
CP019189_2	2.1\|979539\|32\|CP019189\|PILER-CR,CRISPRCasFinder,CRT	979539-979570	32	GU943054	Uncultured phage MedDCM-OCT-S04-C24 genomic sequence	15155-15186	8	0.75
CP019189_2	2.1\|979539\|32\|CP019189\|PILER-CR,CRISPRCasFinder,CRT	979539-979570	32	MN693497	Marine virus AFVG_25M179, complete genome	38164-38195	8	0.75
CP019189_2	2.4\|979722\|32\|CP019189\|PILER-CR,CRISPRCasFinder,CRT	979722-979753	32	NZ_CP029452	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence	2052295-2052326	8	0.75
CP019189_3	3.1\|996015\|32\|CP019189\|CRISPRCasFinder,CRT	996015-996046	32	NZ_AP018257	Calothrix sp. NIES-4071 plasmid plasmid2 DNA, complete genome	195507-195538	8	0.75
CP019189_3	3.13\|996747\|32\|CP019189\|CRISPRCasFinder,CRT	996747-996778	32	NZ_CP010615	Phaeobacter inhibens strain P92 plasmid pP92_e, complete sequence	20313-20344	8	0.75
CP019189_3	3.13\|996747\|32\|CP019189\|CRISPRCasFinder,CRT	996747-996778	32	NZ_CP010634	Phaeobacter inhibens strain P78 plasmid pP78_e, complete sequence	20313-20344	8	0.75
CP019189_3	3.13\|996747\|32\|CP019189\|CRISPRCasFinder,CRT	996747-996778	32	NZ_CP010606	Phaeobacter inhibens strain P83 plasmid pP83_g, complete sequence	20321-20352	8	0.75
CP019189_3	3.13\|996747\|32\|CP019189\|CRISPRCasFinder,CRT	996747-996778	32	NZ_CP010774	Phaeobacter piscinae strain P13 plasmid pP13_g, complete sequence	20321-20352	8	0.75
CP019189_3	3.13\|996747\|32\|CP019189\|CRISPRCasFinder,CRT	996747-996778	32	NZ_CP010712	Phaeobacter inhibens strain P66 plasmid pP66_g, complete sequence	20337-20368	8	0.75
CP019189_3	3.21\|997236\|32\|CP019189\|CRISPRCasFinder,CRT	997236-997267	32	KM659097	Paracoccus yeei plasmid pLM20P5, complete sequence	11561-11592	8	0.75
CP019189_3	3.21\|997236\|32\|CP019189\|CRISPRCasFinder,CRT	997236-997267	32	MH834622	Arthrobacter phage Noely, complete genome	3314-3345	8	0.75
CP019189_3	3.23\|997358\|32\|CP019189\|CRISPRCasFinder,CRT	997358-997389	32	NZ_CP032323	Azospirillum brasilense strain MTCC4035 plasmid p2, complete sequence	535727-535758	8	0.75
CP019189_3	3.32\|997907\|32\|CP019189\|CRISPRCasFinder,CRT	997907-997938	32	MH458951	Bacillus phage vB_BthS-BMBphi, complete genome	2793-2824	8	0.75
CP019189_3	3.4\|996198\|32\|CP019189\|CRISPRCasFinder,CRT	996198-996229	32	NZ_CP039706	Clostridium butyricum strain 4-1 plasmid p-butyl_plas_4-1, complete sequence	502920-502951	9	0.719
CP019189_3	3.6\|996320\|32\|CP019189\|CRISPRCasFinder,CRT	996320-996351	32	MG893203	Vibrio phage VP06, complete genome	26226-26257	9	0.719
CP019189_3	3.11\|996625\|32\|CP019189\|CRISPRCasFinder,CRT	996625-996656	32	NZ_CP049117	Pantoea stewartii strain ZJ-FGZX1 plasmid unnamed2, complete sequence	40403-40434	9	0.719
CP019189_3	3.11\|996625\|32\|CP019189\|CRISPRCasFinder,CRT	996625-996656	32	NZ_CP035035	Pantoea ananatis strain NN08200 plasmid unnamed1, complete sequence	6373-6404	9	0.719
CP019189_3	3.21\|997236\|32\|CP019189\|CRISPRCasFinder,CRT	997236-997267	32	MF919512	Mycobacterium phage Klein, complete genome	101112-101143	9	0.719
CP019189_3	3.22\|997297\|32\|CP019189\|CRISPRCasFinder,CRT	997297-997328	32	NZ_CP016617	Microvirga ossetica strain V5/3m plasmid unnamed1, complete sequence	670891-670922	9	0.719
CP019189_3	3.24\|997419\|32\|CP019189\|CRISPRCasFinder,CRT	997419-997450	32	AP013386	Uncultured Mediterranean phage uvMED DNA, complete genome, group G15, isolate: uvMED-CGR-C23-MedDCM-OCT-S37-C51	33360-33391	9	0.719
CP019189_3	3.24\|997419\|32\|CP019189\|CRISPRCasFinder,CRT	997419-997450	32	GU943014	Uncultured phage MedDCM-OCT-S04-C1161 genomic sequence	17166-17197	9	0.719
CP019189_3	3.24\|997419\|32\|CP019189\|CRISPRCasFinder,CRT	997419-997450	32	AP014420	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C24-MedDCM-OCT-S43-C167, * SEQUENCING IN PROGRESS *, 5 ordered pieces	1557-1588	9	0.719
CP019189_3	3.24\|997419\|32\|CP019189\|CRISPRCasFinder,CRT	997419-997450	32	GU943017	Uncultured phage MedDCM-OCT-S04-C1227 genomic sequence	8838-8869	9	0.719
CP019189_3	3.24\|997419\|32\|CP019189\|CRISPRCasFinder,CRT	997419-997450	32	AP014417	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C24-MedDCM-OCT-S39-C59, * SEQUENCING IN PROGRESS *, 5 ordered pieces	32062-32093	9	0.719
CP019189_3	3.24\|997419\|32\|CP019189\|CRISPRCasFinder,CRT	997419-997450	32	GU943022	Uncultured phage MedDCM-OCT-S04-C890 genomic sequence	8801-8832	9	0.719
CP019189_3	3.24\|997419\|32\|CP019189\|CRISPRCasFinder,CRT	997419-997450	32	GU943013	Uncultured phage MedDCM-OCT-S04-C1035 genomic sequence	10849-10880	9	0.719
CP019189_3	3.24\|997419\|32\|CP019189\|CRISPRCasFinder,CRT	997419-997450	32	AP014416	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C24-MedDCM-OCT-S27-C110, * SEQUENCING IN PROGRESS *, 4 ordered pieces	9243-9274	9	0.719
CP019189_3	3.31\|997846\|32\|CP019189\|CRISPRCasFinder,CRT	997846-997877	32	AP018319	Nostoc sp. HK-01 plasmid plasmid1 DNA, complete genome	224616-224647	9	0.719
CP019189_3	3.34\|998030\|32\|CP019189\|CRISPRCasFinder,CRT	998030-998061	32	NZ_CP012748	Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence	2054717-2054748	9	0.719
CP019189_2	2.1\|979539\|32\|CP019189\|PILER-CR,CRISPRCasFinder,CRT	979539-979570	32	MK867354	Synechococcus phage S-SCSM1, complete genome	85554-85585	10	0.688
CP019189_2	2.1\|979539\|32\|CP019189\|PILER-CR,CRISPRCasFinder,CRT	979539-979570	32	NC_031056	Bacillus phage Deep Blue, complete genome	12274-12305	10	0.688
CP019189_3	3.1\|996015\|32\|CP019189\|CRISPRCasFinder,CRT	996015-996046	32	NZ_CP045273	Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence	513301-513332	10	0.688
CP019189_3	3.4\|996198\|32\|CP019189\|CRISPRCasFinder,CRT	996198-996229	32	NC_018493	Bacillus cereus FRI-35 plasmid p02, complete sequence	11521-11552	10	0.688
CP019189_3	3.14\|996808\|32\|CP019189\|CRISPRCasFinder,CRT	996808-996839	32	NC_014309	Ralstonia solanacearum CFBP2957 plasmid RCFBPv3_mp, complete genome	786976-787007	10	0.688
CP019189_3	3.21\|997236\|32\|CP019189\|CRISPRCasFinder,CRT	997236-997267	32	NZ_CP040821	Paraoceanicella profunda strain D4M1 plasmid pD4M1C, complete sequence	111697-111728	10	0.688
CP019189_3	3.21\|997236\|32\|CP019189\|CRISPRCasFinder,CRT	997236-997267	32	MN908686	Microbacterium phage Zepp, complete genome	30030-30061	10	0.688
CP019189_3	3.21\|997236\|32\|CP019189\|CRISPRCasFinder,CRT	997236-997267	32	MT889377	Microbacterium phage Zayuliv, complete genome	30596-30627	10	0.688

1. spacer 3.10|996564|32|CP019189|CRISPRCasFinder,CRT matches to NZ_LN890526 (Salmonella enterica subsp. enterica serovar Weltevreden strain 2511STDY5712385 plasmid 3, complete sequence) position: , mismatch: 0, identity: 1.0

cactctgcgtaatggcaaattccaattctttc	CRISPR spacer
cactctgcgtaatggcaaattccaattctttc	Protospacer
********************************

2. spacer 3.32|997907|32|CP019189|CRISPRCasFinder,CRT matches to CP053320 (Salmonella enterica subsp. arizonae serovar 41:z4,z23:- strain 2016K-0011 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.875

gggcagaattaacggacgaacagcggcagaca	CRISPR spacer
gagctgaattaacggacgaacagcgccagacg	Protospacer
*.** ******************** *****.

3. spacer 2.4|979722|32|CP019189|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024424 (Paracoccus yeei strain TT13 plasmid pTT13-2, complete sequence) position: , mismatch: 5, identity: 0.844

gggatcgcgctggcggtcgcatccgttgccgt-	CRISPR spacer
gagatcgcgctggcggcctcatccg-tgccgca	Protospacer
*.**************.* ****** *****.

4. spacer 2.4|979722|32|CP019189|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020440 (Paracoccus yeei strain FDAARGOS_252 plasmid unnamed2, complete sequence) position: , mismatch: 5, identity: 0.844

gggatcgcgctggcggtcgcatccgttgccgt-	CRISPR spacer
gagatcgcgctggcggcctcatccg-tgccgca	Protospacer
*.**************.* ****** *****.

5. spacer 2.4|979722|32|CP019189|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044082 (Paracoccus yeei strain FDAARGOS_643 plasmid unnamed4, complete sequence) position: , mismatch: 5, identity: 0.844

gggatcgcgctggcggtcgcatccgttgccgt-	CRISPR spacer
gagatcgcgctggcggcctcatccg-tgccgca	Protospacer
*.**************.* ****** *****.

6. spacer 3.30|997785|32|CP019189|CRISPRCasFinder,CRT matches to JN672684 (Enterobacteria phage F20, partial genome) position: , mismatch: 5, identity: 0.844

ttttcgctcgcgctcgtccatcattccgcgcc	CRISPR spacer
ttcgcgctcgcgatcgtccatcattccgaacc	Protospacer
**. ******** *************** .**

7. spacer 2.4|979722|32|CP019189|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP031080 (Paracoccus yeei strain CCUG 32053 plasmid pYEE2, complete sequence) position: , mismatch: 6, identity: 0.812

gggatcgcgctggcggtcgcatccgttgccgt-	CRISPR spacer
cagatcgcgctggcggcctcatccg-tgccgca	Protospacer
 .**************.* ****** *****.

8. spacer 3.30|997785|32|CP019189|CRISPRCasFinder,CRT matches to NC_049845 (Klebsiella phage PhiKpNIH-2, complete genome) position: , mismatch: 6, identity: 0.812

ttttcgctcgcgctcgtccatcattccgcgcc	CRISPR spacer
ttcgcgctcgcggtcgtccatcatcccgaacc	Protospacer
**. ******** ***********.*** .**

9. spacer 3.30|997785|32|CP019189|CRISPRCasFinder,CRT matches to MK931442 (Klebsiella phage Sin4, complete genome) position: , mismatch: 6, identity: 0.812

ttttcgctcgcgctcgtccatcattccgcgcc	CRISPR spacer
ttcgcgctcgcggtcgtccatcatcccgaacc	Protospacer
**. ******** ***********.*** .**

10. spacer 2.1|979539|32|CP019189|PILER-CR,CRISPRCasFinder,CRT matches to AJ344259 (Sulfolobus virus SIRV-2 genomic DNA) position: , mismatch: 7, identity: 0.781

---cgatttgtattgattaattttgtcaagattgt	CRISPR spacer
agtcgat---tattgataaattttttcaagattcg	Protospacer
   ****   ******* ****** ********

11. spacer 2.4|979722|32|CP019189|PILER-CR,CRISPRCasFinder,CRT matches to NC_008826 (Methylibium petroleiphilum PM1 plasmid RPME01, complete sequence) position: , mismatch: 7, identity: 0.781

gggatcgcgctggcggtcgcatccgttgccgt-	CRISPR spacer
gggatcgcggtggcggtcgc-ttcgaggaagtt	Protospacer
********* ********** *.**  *  **

12. spacer 2.4|979722|32|CP019189|PILER-CR,CRISPRCasFinder,CRT matches to NC_009621 (Sinorhizobium medicae WSM419 plasmid pSMED02, complete sequence) position: , mismatch: 7, identity: 0.781

gggatcgcgctggcggtcgcatccgttgccgt-	CRISPR spacer
cggctcgcgctggcggtcgcttcc-tcggcgcg	Protospacer
 ** **************** *** *.* **.

13. spacer 3.4|996198|32|CP019189|CRISPRCasFinder,CRT matches to MK448714 (Streptococcus phage Javan241, complete genome) position: , mismatch: 7, identity: 0.781

aaaacaacattaataaaaaccggtttaagcgc	CRISPR spacer
ataacaacattaataaaatccgcttcacgttc	Protospacer
* **************** *** **.* *. *

14. spacer 3.6|996320|32|CP019189|CRISPRCasFinder,CRT matches to MK416008 (Klebsiella phage ST405-OXA48phi1.3, complete genome) position: , mismatch: 7, identity: 0.781

--atccgatccacatcagcagccagctctttaaa	CRISPR spacer
tcatcc--tccggatcagcagccagctctttgcg	Protospacer
  ****  ***. ******************. .

15. spacer 3.7|996381|32|CP019189|CRISPRCasFinder,CRT matches to KJ803031 (Dinoroseobacter phage vBDshPR2C, complete genome) position: , mismatch: 7, identity: 0.781

accaaagctcgatatcagtcaattatggccag--	CRISPR spacer
accaaagctcgatatcgggcaat--tggctgaac	Protospacer
****************.* ****  ****...

16. spacer 3.18|997053|32|CP019189|CRISPRCasFinder,CRT matches to NZ_CP043441 (Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

-gcgatcacctgtcgctggcggaaatcaatagc	CRISPR spacer
cgcaa-ggcgtgtcgctggcggacatcaacagc	Protospacer
 **.*  .* ************* *****.***

17. spacer 3.21|997236|32|CP019189|CRISPRCasFinder,CRT matches to NZ_CP054841 (Acidovorax sp. 16-35-5 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

ctcccggccgaggccgtgacggtgaaacagaa	CRISPR spacer
gaccccgcccaggccgtgacggtgaatgcgaa	Protospacer
  *** *** ****************   ***

18. spacer 3.30|997785|32|CP019189|CRISPRCasFinder,CRT matches to MN101222 (Klebsiella phage KOX9, complete genome) position: , mismatch: 7, identity: 0.781

ttttcgctcgcgctcgtccatcattccgcgcc	CRISPR spacer
ctcgcgctcgcgatcgtccatcattccaaacc	Protospacer
.*. ******** **************. .**

19. spacer 3.30|997785|32|CP019189|CRISPRCasFinder,CRT matches to MN395285 (Klebsiella phage PhiKpNIH-10, complete genome) position: , mismatch: 7, identity: 0.781

ttttcgctcgcgctcgtccatcattccgcgcc	CRISPR spacer
ctcgcgctcgcggtcgtccatcatcccgaacc	Protospacer
.*. ******** ***********.*** .**

20. spacer 3.30|997785|32|CP019189|CRISPRCasFinder,CRT matches to KY575286 (UNVERIFIED: Klebsiella phage SH-Kp 160016, complete genome) position: , mismatch: 7, identity: 0.781

ttttcgctcgcgctcgtccatcattccgcgcc	CRISPR spacer
ctcgcgctcgcggtcgtccatcatcccgaacc	Protospacer
.*. ******** ***********.*** .**

21. spacer 3.30|997785|32|CP019189|CRISPRCasFinder,CRT matches to MH633486 (Klebsiella phage NJS3, complete genome) position: , mismatch: 7, identity: 0.781

ttttcgctcgcgctcgtccatcattccgcgcc	CRISPR spacer
ctcgcgctcgcggtcgtccatcatcccgaacc	Protospacer
.*. ******** ***********.*** .**

22. spacer 3.30|997785|32|CP019189|CRISPRCasFinder,CRT matches to MK618657 (Klebsiella phage Sanco, complete genome) position: , mismatch: 7, identity: 0.781

ttttcgctcgcgctcgtccatcattccgcgcc	CRISPR spacer
ctcgcgctcgcggtcgtccatcatcccgaacc	Protospacer
.*. ******** ***********.*** .**

23. spacer 3.30|997785|32|CP019189|CRISPRCasFinder,CRT matches to NC_049842 (Klebsiella phage vB_KpnS_15-38_KLPPOU149, complete genome) position: , mismatch: 7, identity: 0.781

ttttcgctcgcgctcgtccatcattccgcgcc	CRISPR spacer
ctcgcgctcgcggtcgtccatcatcccgaacc	Protospacer
.*. ******** ***********.*** .**

24. spacer 3.30|997785|32|CP019189|CRISPRCasFinder,CRT matches to LR757892 (Klebsiella phage vB_KpnS_2811 genome assembly, chromosome: 1) position: , mismatch: 7, identity: 0.781

ttttcgctcgcgctcgtccatcattccgcgcc	CRISPR spacer
ctcgcgctcgcggtcgtccatcatcccgaacc	Protospacer
.*. ******** ***********.*** .**

25. spacer 3.30|997785|32|CP019189|CRISPRCasFinder,CRT matches to MF415412 (Klebsiella phage KPN N141, complete genome) position: , mismatch: 7, identity: 0.781

ttttcgctcgcgctcgtccatcattccgcgcc	CRISPR spacer
ctcgcgctcgcggtcgtccatcatcccgaacc	Protospacer
.*. ******** ***********.*** .**

26. spacer 3.30|997785|32|CP019189|CRISPRCasFinder,CRT matches to MF612072 (Klebsiella phage MezzoGao, complete genome) position: , mismatch: 7, identity: 0.781

ttttcgctcgcgctcgtccatcattccgcgcc	CRISPR spacer
ctcgcgctcgcggtcgtccatcatcccgaacc	Protospacer
.*. ******** ***********.*** .**

27. spacer 3.30|997785|32|CP019189|CRISPRCasFinder,CRT matches to MT894005 (Klebsiella phage MMBB, complete genome) position: , mismatch: 7, identity: 0.781

ttttcgctcgcgctcgtccatcattccgcgcc	CRISPR spacer
ctcgcgctcgcggtcgtccatcatcccgaacc	Protospacer
.*. ******** ***********.*** .**

28. spacer 3.30|997785|32|CP019189|CRISPRCasFinder,CRT matches to MG552615 (Klebsiella virus GML-KpCol1, complete genome) position: , mismatch: 7, identity: 0.781

ttttcgctcgcgctcgtccatcattccgcgcc	CRISPR spacer
ctcgcgctcgcggtcgtccatcatcccgaacc	Protospacer
.*. ******** ***********.*** .**

29. spacer 3.30|997785|32|CP019189|CRISPRCasFinder,CRT matches to MK931445 (Klebsiella phage Shelby, complete genome) position: , mismatch: 7, identity: 0.781

ttttcgctcgcgctcgtccatcattccgcgcc	CRISPR spacer
ctcgcgctcgcggtcgtccatcataccgaacc	Protospacer
.*. ******** *********** *** .**

30. spacer 3.30|997785|32|CP019189|CRISPRCasFinder,CRT matches to JF501022 (Klebsiella phage KP36, complete genome) position: , mismatch: 7, identity: 0.781

ttttcgctcgcgctcgtccatcattccgcgcc	CRISPR spacer
ctcgcgctcgcggtcgtccatcatcccgaacc	Protospacer
.*. ******** ***********.*** .**

31. spacer 3.30|997785|32|CP019189|CRISPRCasFinder,CRT matches to KP658157 (Klebsiella phage 1513, complete genome) position: , mismatch: 7, identity: 0.781

ttttcgctcgcgctcgtccatcattccgcgcc	CRISPR spacer
ctcgcgctcgcggtcgtccatcatcccgaacc	Protospacer
.*. ******** ***********.*** .**

32. spacer 3.30|997785|32|CP019189|CRISPRCasFinder,CRT matches to MH445453 (Klebsiella phage NJS1, complete genome) position: , mismatch: 7, identity: 0.781

ttttcgctcgcgctcgtccatcattccgcgcc	CRISPR spacer
ctcgcgctcgcggtcgtccatcatcccgaacc	Protospacer
.*. ******** ***********.*** .**

33. spacer 3.30|997785|32|CP019189|CRISPRCasFinder,CRT matches to NC_028760 (Klebsiella phage KLPN1, complete genome) position: , mismatch: 7, identity: 0.781

ttttcgctcgcgctcgtccatcattccgcgcc	CRISPR spacer
ctcgcgctcgcggtcgtccatcatcccgaacc	Protospacer
.*. ******** ***********.*** .**

34. spacer 3.30|997785|32|CP019189|CRISPRCasFinder,CRT matches to NC_049848 (Klebsiella phage KP1801, complete genome) position: , mismatch: 7, identity: 0.781

ttttcgctcgcgctcgtccatcattccgcgcc	CRISPR spacer
ctcgcgctcgcggtcgtccatcatcccgaacc	Protospacer
.*. ******** ***********.*** .**

35. spacer 3.30|997785|32|CP019189|CRISPRCasFinder,CRT matches to MH633484 (Klebsiella phage TAH8, complete genome) position: , mismatch: 7, identity: 0.781

ttttcgctcgcgctcgtccatcattccgcgcc	CRISPR spacer
ctcgcgctcgcggtcgtccatcatcccgaacc	Protospacer
.*. ******** ***********.*** .**

36. spacer 3.30|997785|32|CP019189|CRISPRCasFinder,CRT matches to NC_048043 (Klebsiella phage NJS2, complete genome) position: , mismatch: 7, identity: 0.781

ttttcgctcgcgctcgtccatcattccgcgcc	CRISPR spacer
ctcgcgctcgcggtcgtccatcatcccgaacc	Protospacer
.*. ******** ***********.*** .**

37. spacer 3.30|997785|32|CP019189|CRISPRCasFinder,CRT matches to MK931443 (Klebsiella phage Sweeny, complete genome) position: , mismatch: 7, identity: 0.781

ttttcgctcgcgctcgtccatcattccgcgcc	CRISPR spacer
ctcgcgctcgcggtcgtccatcatcccgaacc	Protospacer
.*. ******** ***********.*** .**

38. spacer 3.30|997785|32|CP019189|CRISPRCasFinder,CRT matches to NC_049838 (Klebsiella phage KL, complete genome) position: , mismatch: 7, identity: 0.781

ttttcgctcgcgctcgtccatcattccgcgcc	CRISPR spacer
ctcgcgctcgcggtcgtccatcatcccgaacc	Protospacer
.*. ******** ***********.*** .**

39. spacer 3.30|997785|32|CP019189|CRISPRCasFinder,CRT matches to MH844531 (Klebsiella phage GH-K3, complete genome) position: , mismatch: 7, identity: 0.781

ttttcgctcgcgctcgtccatcattccgcgcc	CRISPR spacer
ctcgcgctcgcggtcgtccatcatcccgaacc	Protospacer
.*. ******** ***********.*** .**

40. spacer 3.30|997785|32|CP019189|CRISPRCasFinder,CRT matches to NC_048044 (Klebsiella phage NJR15, complete genome) position: , mismatch: 7, identity: 0.781

ttttcgctcgcgctcgtccatcattccgcgcc	CRISPR spacer
ctcgcgctcgcggtcgtccatcatcccgaacc	Protospacer
.*. ******** ***********.*** .**

41. spacer 3.30|997785|32|CP019189|CRISPRCasFinder,CRT matches to MG894052 (Klebsiella phage JY917, complete genome) position: , mismatch: 7, identity: 0.781

ttttcgctcgcgctcgtccatcattccgcgcc	CRISPR spacer
ctcgcgctcgcggtcgtccatcatcccgaacc	Protospacer
.*. ******** ***********.*** .**

42. spacer 3.30|997785|32|CP019189|CRISPRCasFinder,CRT matches to NC_048126 (Klebsiella phage TSK1, complete genome) position: , mismatch: 7, identity: 0.781

ttttcgctcgcgctcgtccatcattccgcgcc	CRISPR spacer
ctcgcgctcgcggtcgtccatcatcccgaacc	Protospacer
.*. ******** ***********.*** .**

43. spacer 3.30|997785|32|CP019189|CRISPRCasFinder,CRT matches to MK931444 (Klebsiella phage Skenny, complete genome) position: , mismatch: 7, identity: 0.781

ttttcgctcgcgctcgtccatcattccgcgcc	CRISPR spacer
ctcgcgctcgcggtcgtccatcatcccgaacc	Protospacer
.*. ******** ***********.*** .**

44. spacer 3.30|997785|32|CP019189|CRISPRCasFinder,CRT matches to NC_048143 (Klebsiella phage KpKT21phi1, complete genome) position: , mismatch: 7, identity: 0.781

ttttcgctcgcgctcgtccatcattccgcgcc	CRISPR spacer
ctcgcgctcgcggtcgtccatcatcccgaacc	Protospacer
.*. ******** ***********.*** .**

45. spacer 3.30|997785|32|CP019189|CRISPRCasFinder,CRT matches to NC_028774 (Klebsiella phage Sushi, complete genome) position: , mismatch: 7, identity: 0.781

ttttcgctcgcgctcgtccatcattccgcgcc	CRISPR spacer
ctcgcgctcgcggtcgtccatcatcccgaacc	Protospacer
.*. ******** ***********.*** .**

46. spacer 3.30|997785|32|CP019189|CRISPRCasFinder,CRT matches to NC_049840 (Klebsiella phage vB_KpnS_FZ10, complete genome) position: , mismatch: 7, identity: 0.781

ttttcgctcgcgctcgtccatcattccgcgcc	CRISPR spacer
ctcgcgctcgcggtcgtccatcatcccgaacc	Protospacer
.*. ******** ***********.*** .**

47. spacer 3.30|997785|32|CP019189|CRISPRCasFinder,CRT matches to NC_049844 (Klebsiella phage 13, complete genome) position: , mismatch: 7, identity: 0.781

ttttcgctcgcgctcgtccatcattccgcgcc	CRISPR spacer
ctcgcgctcgcggtcgtccatcatcccgaacc	Protospacer
.*. ******** ***********.*** .**

48. spacer 2.1|979539|32|CP019189|PILER-CR,CRISPRCasFinder,CRT matches to GU943054 (Uncultured phage MedDCM-OCT-S04-C24 genomic sequence) position: , mismatch: 8, identity: 0.75

cgatttgtattgattaattttgtcaagattgt	CRISPR spacer
taaaattttttgattaattttttcgagattgt	Protospacer
..*  * * ************ **.*******

49. spacer 2.1|979539|32|CP019189|PILER-CR,CRISPRCasFinder,CRT matches to MN693497 (Marine virus AFVG_25M179, complete genome) position: , mismatch: 8, identity: 0.75

cgatttgtattgattaattttgtcaagattgt----	CRISPR spacer
cgatttgtatatattaattttgt----gctgtgagc	Protospacer
**********  ***********    ..***

50. spacer 2.4|979722|32|CP019189|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 8, identity: 0.75

gggatcgcgctggcggtcgcatccgttgccgt	CRISPR spacer
cggctcgcgctcgcggtcgcatcctcggcccg	Protospacer
 ** ******* ************ . ***

51. spacer 3.1|996015|32|CP019189|CRISPRCasFinder,CRT matches to NZ_AP018257 (Calothrix sp. NIES-4071 plasmid plasmid2 DNA, complete genome) position: , mismatch: 8, identity: 0.75

gtttccaaacttttatatttctgtggacaata	CRISPR spacer
ggttgttaaatttaatatttctgtggacaact	Protospacer
* ** . ** *** ****************.

52. spacer 3.13|996747|32|CP019189|CRISPRCasFinder,CRT matches to NZ_CP010615 (Phaeobacter inhibens strain P92 plasmid pP92_e, complete sequence) position: , mismatch: 8, identity: 0.75

aattcctc------gataacgatctgcaccaggttgaa	CRISPR spacer
------tcagaaaagagaacgatcggcaccaggttgaa	Protospacer
      **      ** ******* *************

53. spacer 3.13|996747|32|CP019189|CRISPRCasFinder,CRT matches to NZ_CP010634 (Phaeobacter inhibens strain P78 plasmid pP78_e, complete sequence) position: , mismatch: 8, identity: 0.75

aattcctc------gataacgatctgcaccaggttgaa	CRISPR spacer
------tcagaaaagagaacgatcggcaccaggttgaa	Protospacer
      **      ** ******* *************

54. spacer 3.13|996747|32|CP019189|CRISPRCasFinder,CRT matches to NZ_CP010606 (Phaeobacter inhibens strain P83 plasmid pP83_g, complete sequence) position: , mismatch: 8, identity: 0.75

aattcctc------gataacgatctgcaccaggttgaa	CRISPR spacer
------tcagaaaagagaacgatcggcaccaggttgaa	Protospacer
      **      ** ******* *************

55. spacer 3.13|996747|32|CP019189|CRISPRCasFinder,CRT matches to NZ_CP010774 (Phaeobacter piscinae strain P13 plasmid pP13_g, complete sequence) position: , mismatch: 8, identity: 0.75

aattcctc------gataacgatctgcaccaggttgaa	CRISPR spacer
------tcagaaaagagaacgatcggcaccaggttgaa	Protospacer
      **      ** ******* *************

56. spacer 3.13|996747|32|CP019189|CRISPRCasFinder,CRT matches to NZ_CP010712 (Phaeobacter inhibens strain P66 plasmid pP66_g, complete sequence) position: , mismatch: 8, identity: 0.75

aattcctc------gataacgatctgcaccaggttgaa	CRISPR spacer
------tcagaaaagagaacgatcggcaccaggttgaa	Protospacer
      **      ** ******* *************

57. spacer 3.21|997236|32|CP019189|CRISPRCasFinder,CRT matches to KM659097 (Paracoccus yeei plasmid pLM20P5, complete sequence) position: , mismatch: 8, identity: 0.75

ctcccggccgaggccgtgacggtgaaacagaa	CRISPR spacer
gtcccggccgagggcgggacggtgctgcggac	Protospacer
 ************ ** *******  .*.**

58. spacer 3.21|997236|32|CP019189|CRISPRCasFinder,CRT matches to MH834622 (Arthrobacter phage Noely, complete genome) position: , mismatch: 8, identity: 0.75

ctcccggccgaggccgtgacggtgaaacagaa	CRISPR spacer
gccccggacggggccgtgacggtgacgcccaa	Protospacer
 .***** **.************** .*  **

59. spacer 3.23|997358|32|CP019189|CRISPRCasFinder,CRT matches to NZ_CP032323 (Azospirillum brasilense strain MTCC4035 plasmid p2, complete sequence) position: , mismatch: 8, identity: 0.75

ggcctcaca-gcggcgcccgctggtcacgacca	CRISPR spacer
-gttgagcaggcggcgcccgctggcctcgacca	Protospacer
 *..  .** **************.* ******

60. spacer 3.32|997907|32|CP019189|CRISPRCasFinder,CRT matches to MH458951 (Bacillus phage vB_BthS-BMBphi, complete genome) position: , mismatch: 8, identity: 0.75

gggcagaattaacggacgaacagcggcagaca	CRISPR spacer
tgaatggattaacggacgaacagcgaaagaga	Protospacer
 *.  *.******************. *** *

61. spacer 3.4|996198|32|CP019189|CRISPRCasFinder,CRT matches to NZ_CP039706 (Clostridium butyricum strain 4-1 plasmid p-butyl_plas_4-1, complete sequence) position: , mismatch: 9, identity: 0.719

aaaacaacattaataaaaaccggtttaagcgc	CRISPR spacer
tatgaaacattattaaaaacaggtttaaaagg	Protospacer
 * . ******* ******* *******. *

62. spacer 3.6|996320|32|CP019189|CRISPRCasFinder,CRT matches to MG893203 (Vibrio phage VP06, complete genome) position: , mismatch: 9, identity: 0.719

atccgatccacatcagcagccagctctttaaa	CRISPR spacer
gaagcagctacacccgcagccagctctttaaa	Protospacer
.    * *.***.* *****************

63. spacer 3.11|996625|32|CP019189|CRISPRCasFinder,CRT matches to NZ_CP049117 (Pantoea stewartii strain ZJ-FGZX1 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

cagacagtaaaagtgaggcagcagggcggagc	CRISPR spacer
acagtaacaaaactgaggcagcagggcggggc	Protospacer
  ...*..**** ****************.**

64. spacer 3.11|996625|32|CP019189|CRISPRCasFinder,CRT matches to NZ_CP035035 (Pantoea ananatis strain NN08200 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

cagacagtaaaagtgaggcagcagggcggagc	CRISPR spacer
acagtaacaaaactgaggcagcagggcggggc	Protospacer
  ...*..**** ****************.**

65. spacer 3.21|997236|32|CP019189|CRISPRCasFinder,CRT matches to MF919512 (Mycobacterium phage Klein, complete genome) position: , mismatch: 9, identity: 0.719

ctcccggccgaggccgtgacggtgaaacagaa	CRISPR spacer
atcccggccgatgacgtgacggtgggtgatat	Protospacer
 ********** * **********..  * *

66. spacer 3.22|997297|32|CP019189|CRISPRCasFinder,CRT matches to NZ_CP016617 (Microvirga ossetica strain V5/3m plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

gtacagaaaaaagaggcgtcgcatgtggcgat	CRISPR spacer
tgtcggcgcaaagatgcgtggcatgtggcgat	Protospacer
   *.* . ***** **** ************

67. spacer 3.24|997419|32|CP019189|CRISPRCasFinder,CRT matches to AP013386 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G15, isolate: uvMED-CGR-C23-MedDCM-OCT-S37-C51) position: , mismatch: 9, identity: 0.719

cccgccgtctgtcacacctgttatgtaattgt	CRISPR spacer
aaatctatctgtaacatctgttatgtaattgc	Protospacer
    *..***** ***.**************.

68. spacer 3.24|997419|32|CP019189|CRISPRCasFinder,CRT matches to GU943014 (Uncultured phage MedDCM-OCT-S04-C1161 genomic sequence) position: , mismatch: 9, identity: 0.719

cccgccgtctgtcacacctgttatgtaattgt	CRISPR spacer
aaatctatctgtaacatctgttatgtaattgc	Protospacer
    *..***** ***.**************.

69. spacer 3.24|997419|32|CP019189|CRISPRCasFinder,CRT matches to AP014420 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C24-MedDCM-OCT-S43-C167, *** SEQUENCING IN PROGRESS ***, 5 ordered pieces) position: , mismatch: 9, identity: 0.719

cccgccgtctgtcacacctgttatgtaattgt	CRISPR spacer
aaatctatctgtaacatctgttatgtaattgc	Protospacer
    *..***** ***.**************.

70. spacer 3.24|997419|32|CP019189|CRISPRCasFinder,CRT matches to GU943017 (Uncultured phage MedDCM-OCT-S04-C1227 genomic sequence) position: , mismatch: 9, identity: 0.719

cccgccgtctgtcacacctgttatgtaattgt	CRISPR spacer
aaatctatctgtaacatctgttatgtaattgc	Protospacer
    *..***** ***.**************.

71. spacer 3.24|997419|32|CP019189|CRISPRCasFinder,CRT matches to AP014417 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C24-MedDCM-OCT-S39-C59, *** SEQUENCING IN PROGRESS ***, 5 ordered pieces) position: , mismatch: 9, identity: 0.719

cccgccgtctgtcacacctgttatgtaattgt	CRISPR spacer
aaatctatctgtaacatctgttatgtaattgc	Protospacer
    *..***** ***.**************.

72. spacer 3.24|997419|32|CP019189|CRISPRCasFinder,CRT matches to GU943022 (Uncultured phage MedDCM-OCT-S04-C890 genomic sequence) position: , mismatch: 9, identity: 0.719

cccgccgtctgtcacacctgttatgtaattgt	CRISPR spacer
aaatctatctgtaacatctgttatgtaattgc	Protospacer
    *..***** ***.**************.

73. spacer 3.24|997419|32|CP019189|CRISPRCasFinder,CRT matches to GU943013 (Uncultured phage MedDCM-OCT-S04-C1035 genomic sequence) position: , mismatch: 9, identity: 0.719

cccgccgtctgtcacacctgttatgtaattgt	CRISPR spacer
aaatctatctgtaacatctgttatgtaattgc	Protospacer
    *..***** ***.**************.

74. spacer 3.24|997419|32|CP019189|CRISPRCasFinder,CRT matches to AP014416 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C24-MedDCM-OCT-S27-C110, *** SEQUENCING IN PROGRESS ***, 4 ordered pieces) position: , mismatch: 9, identity: 0.719

cccgccgtctgtcacacctgttatgtaattgt	CRISPR spacer
aaatctatctgtaacatctgttatgtaattgc	Protospacer
    *..***** ***.**************.

75. spacer 3.31|997846|32|CP019189|CRISPRCasFinder,CRT matches to AP018319 (Nostoc sp. HK-01 plasmid plasmid1 DNA, complete genome) position: , mismatch: 9, identity: 0.719

ataatcaggtcgttaatattttttgtctgcgc	CRISPR spacer
aaaatcaggtgtttaatattttttgggttgat	Protospacer
* ********  *************  *  ..

76. spacer 3.34|998030|32|CP019189|CRISPRCasFinder,CRT matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

ggagcgggacgacagcgaaccatccggaaaaa	CRISPR spacer
gacttgtgaccacagcgaacaatccggaaatc	Protospacer
*.  .* *** ********* *********

77. spacer 2.1|979539|32|CP019189|PILER-CR,CRISPRCasFinder,CRT matches to MK867354 (Synechococcus phage S-SCSM1, complete genome) position: , mismatch: 10, identity: 0.688

cgatttgtattgattaattttgtcaagattgt	CRISPR spacer
atacatgtaatgattaattttttcaagaacac	Protospacer
  *. **** *********** ****** ...

78. spacer 2.1|979539|32|CP019189|PILER-CR,CRISPRCasFinder,CRT matches to NC_031056 (Bacillus phage Deep Blue, complete genome) position: , mismatch: 10, identity: 0.688

cgatttgtattgattaattttgtcaagattgt	CRISPR spacer
ttattagtattgtttaattttgtcatttgaat	Protospacer
. *** ****** ************     .*

79. spacer 3.1|996015|32|CP019189|CRISPRCasFinder,CRT matches to NZ_CP045273 (Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence) position: , mismatch: 10, identity: 0.688

gtttccaaacttttatatttctgtggacaata	CRISPR spacer
agaatatagcttttatatttctctggccaata	Protospacer
.   .  *.************* *** *****

80. spacer 3.4|996198|32|CP019189|CRISPRCasFinder,CRT matches to NC_018493 (Bacillus cereus FRI-35 plasmid p02, complete sequence) position: , mismatch: 10, identity: 0.688

aaaacaacattaataaaaaccggtttaagcgc	CRISPR spacer
gtaacaacattaataaaaaccagttcttatta	Protospacer
. *******************.***.  ..

81. spacer 3.14|996808|32|CP019189|CRISPRCasFinder,CRT matches to NC_014309 (Ralstonia solanacearum CFBP2957 plasmid RCFBPv3_mp, complete genome) position: , mismatch: 10, identity: 0.688

ccgtatcgggtgtttaattttta--------cgtgagaga	CRISPR spacer
ccgtatcggatttttaatttttatcatttctc--------	Protospacer
*********.* ***********        *

82. spacer 3.21|997236|32|CP019189|CRISPRCasFinder,CRT matches to NZ_CP040821 (Paraoceanicella profunda strain D4M1 plasmid pD4M1C, complete sequence) position: , mismatch: 10, identity: 0.688

ctcccggccgaggccgtgacggtgaaacagaa	CRISPR spacer
agcccggccgaggccgtggcggagatcggcga	Protospacer
  ****************.*** **   . .*

83. spacer 3.21|997236|32|CP019189|CRISPRCasFinder,CRT matches to MN908686 (Microbacterium phage Zepp, complete genome) position: , mismatch: 10, identity: 0.688

ctcccggccgaggccgtgacggtgaaacagaa	CRISPR spacer
atcccggccgaggacgtgccggtggtgatcga	Protospacer
 ************ **** *****. .   .*

84. spacer 3.21|997236|32|CP019189|CRISPRCasFinder,CRT matches to MT889377 (Microbacterium phage Zayuliv, complete genome) position: , mismatch: 10, identity: 0.688

ctcccggccgaggccgtgacggtgaaacagaa	CRISPR spacer
atcccggccgaggacgtgccggtggtgatcga	Protospacer
 ************ **** *****. .   .*

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

656724 : 693815

Cronobacter_phage(72.97%)

transposase,tRNA,tail,portal,holin,capsid,integrase,terminase,head

attL 657412:657471|attR 687533:687594

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUM42936.1\|656724_657408_+\|transposase	transposase	Q6H9S3	Enterobacteria_phage	1.2e-18	34.5
657412:657471	attL	NA	NA	NA	NA
AUM38995.1\|657559_658597_-\|integrase	integrase	F1BUS9	Erwinia_phage	2.8e-120	64.1
AUM38996.1\|658593_659082_-	hypothetical protein	NA	NA	NA	NA
AUM42937.1\|659089_659677_-	phage repressor protein CI	F1BUS8	Erwinia_phage	1.9e-33	40.3
AUM38997.1\|659815_660037_+	regulator	NA	NA	NA	NA
AUM38998.1\|660067_660571_+	hypothetical protein	F1BUN6	Cronobacter_phage	3.5e-60	72.5
AUM38999.1\|660580_660808_+	hypothetical protein	NA	NA	NA	NA
AUM39000.1\|660797_661223_+	hypothetical protein	F1BUN5	Cronobacter_phage	2.2e-23	49.6
AUM39001.1\|661222_661624_+	hypothetical protein	F1BUN2	Cronobacter_phage	1.6e-47	66.2
AUM39002.1\|661691_661925_+	hypothetical protein	NA	NA	NA	NA
AUM39003.1\|662706_663036_+	hypothetical protein	Q2P9X4	Enterobacteria_phage	1.1e-11	44.0
AUM39004.1\|663025_663886_+	adenine methylase	F1BUN1	Cronobacter_phage	1.1e-130	82.4
AUM39005.1\|663882_665904_+	replication protein A	F1BUM9	Cronobacter_phage	2.5e-298	74.6
AUM39006.1\|666020_666227_+	hypothetical protein	NA	NA	NA	NA
AUM39007.1\|666200_666524_-	transcriptional regulator	F1BUM8	Cronobacter_phage	8.0e-50	92.3
AUM39008.1\|666520_667582_-\|portal	phage portal protein	F1BUM7	Cronobacter_phage	4.6e-163	77.1
AUM39009.1\|667578_669354_-\|terminase	terminase	F1BUM5	Cronobacter_phage	1.3e-290	82.9
AUM39010.1\|669514_670318_+\|capsid	phage capsid protein	F1BUM4	Cronobacter_phage	1.6e-78	56.0
AUM39011.1\|670379_671402_+\|capsid	major capsid protein	F1BUM2	Cronobacter_phage	1.1e-158	81.2
AUM39012.1\|671405_672107_+\|terminase	terminase	F1BUM0	Cronobacter_phage	3.6e-87	66.4
AUM39013.1\|672167_672656_+\|head	head completion protein	F1BUL8	Cronobacter_phage	5.0e-64	82.0
AUM39014.1\|672652_673159_+\|tail	phage tail protein	F1BUL7	Cronobacter_phage	1.5e-63	69.1
AUM39015.1\|673155_673863_+	hypothetical protein	F1BUL6	Cronobacter_phage	6.8e-102	76.9
AUM39016.1\|673859_674987_+\|tail	phage tail protein	F1BUL5	Cronobacter_phage	4.3e-175	83.5
AUM39017.1\|674983_675439_+\|tail	phage tail protein	F1BUL4	Cronobacter_phage	7.3e-57	71.5
AUM39018.1\|675448_675742_+\|holin	holin	C7BGD7	Burkholderia_phage	1.3e-14	46.2
AUM39019.1\|675738_676080_+	hypothetical protein	F1BUL3	Cronobacter_phage	2.2e-50	91.1
AUM39020.1\|676079_676412_+	hypothetical protein	F1BUL2	Cronobacter_phage	9.7e-35	70.0
AUM39021.1\|676383_676572_+	hypothetical protein	F1BUL1	Cronobacter_phage	1.1e-22	80.6
AUM39022.1\|676558_676816_+	hypothetical protein	A5X9I7	Aeromonas_virus	3.6e-21	63.4
AUM39023.1\|677003_678974_+\|tail	phage tail tape measure protein	F1BUK9	Cronobacter_phage	2.2e-259	67.7
AUM39024.1\|678970_679300_+	hypothetical protein	F1BUK8	Cronobacter_phage	3.8e-39	72.4
AUM39025.1\|679296_680481_+	hypothetical protein	F1BUK6	Cronobacter_phage	6.7e-179	78.4
AUM39026.1\|680473_681061_+	hypothetical protein	F1BUK5	Cronobacter_phage	2.2e-90	82.6
AUM39027.1\|681070_683098_+\|tail	phage tail protein	F1BUK3	Cronobacter_phage	3.7e-153	47.3
AUM39028.1\|683115_683643_+\|tail	tail assembly chaperone	A0A0U2QV64	Escherichia_phage	5.3e-51	52.6
AUM39029.1\|683632_684358_+	hypothetical protein	F1BUK1	Cronobacter_phage	4.5e-69	57.3
AUM39030.1\|684329_684875_+	hypothetical protein	F1BUJ9	Cronobacter_phage	7.1e-59	71.4
AUM39031.1\|684877_686578_+	hypothetical protein	F1BUJ7	Cronobacter_phage	8.3e-223	81.3
AUM39032.1\|686736_686958_+	hypothetical protein	NA	NA	NA	NA
AUM39033.1\|687750_688257_+	mismatch-specific DNA-glycosylase	NA	NA	NA	NA
687533:687594	attR	NA	NA	NA	NA
AUM39034.1\|688380_690363_-	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	9.0e-35	33.7
AUM39035.1\|690377_692123_-	DNA primase	A0A0K1LMQ9	Caulobacter_phage	2.1e-72	38.4
AUM39036.1\|692358_692574_-	30S ribosomal protein S21	NA	NA	NA	NA
AUM39037.1\|692801_693815_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	2.2e-109	59.5

DBSCAN-SWA_2

1162423 : 1261633

Salmonella_phage(60.34%)

tRNA,tail,portal,capsid,plate,integrase,terminase

attL 1162299:1162336|attR 1204748:1204785

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1162299:1162336	attL	NA	NA	NA	NA
AUM39478.1\|1162423_1163305_-	DNA methyltransferase	A0A0C5AMX6	Cyanophage	2.7e-07	22.5
AUM39479.1\|1163384_1165118_-	AAA family ATPase	NA	NA	NA	NA
AUM39480.1\|1165175_1166342_-\|integrase	integrase	I6PDJ1	Cronobacter_phage	2.8e-145	66.1
AUM42956.1\|1166302_1166509_-	excisionase	I6PBM8	Cronobacter_phage	6.9e-23	68.8
AUM39481.1\|1166550_1167417_-	hypothetical protein	NA	NA	NA	NA
AUM39482.1\|1167525_1168050_-	hypothetical protein	A0A192Y8M4	Salmonella_phage	4.2e-93	97.7
AUM39483.1\|1168185_1169013_-	hypothetical protein	Q8HAA2	Salmonella_phage	3.5e-150	97.8
AUM39484.1\|1169070_1169442_-	hypothetical protein	Q8HAA1	Salmonella_phage	1.2e-62	99.2
AUM39485.1\|1169539_1169725_+	hypothetical protein	NA	NA	NA	NA
AUM39486.1\|1170256_1170952_-	transcriptional regulator	Q8HAA0	Salmonella_phage	4.6e-127	99.6
AUM39487.1\|1170925_1171111_+	hypothetical protein	NA	NA	NA	NA
AUM39488.1\|1171049_1171274_+	transcriptional regulator	A0A1C9IHV8	Salmonella_phage	1.9e-34	100.0
AUM39489.1\|1171302_1171857_+	hypothetical protein	A0A1C9II13	Salmonella_phage	6.9e-102	100.0
AUM39490.1\|1171853_1172996_+	peptidase	Q8HA97	Salmonella_phage	1.4e-178	85.2
AUM39491.1\|1172992_1173217_+	hypothetical protein	A0A1C9II64	Salmonella_phage	1.1e-37	97.3
AUM39492.1\|1173213_1174158_+	helix-turn-helix domain-containing protein	U5P0A0	Shigella_phage	1.7e-129	85.7
AUM39493.1\|1174159_1174642_+	hypothetical protein	Q8HA95	Salmonella_phage	2.3e-85	97.5
AUM39494.1\|1174641_1175295_+	phage N-6-adenine-methyltransferase	A5LH72	Enterobacteria_phage	3.2e-114	88.9
AUM39495.1\|1175291_1175681_+	hypothetical protein	A0A1C9IIA0	Salmonella_phage	2.4e-61	86.0
AUM39496.1\|1175697_1176498_+	DNA-binding protein	A0A0P0ZCS0	Stx2-converting_phage	5.7e-105	71.8
AUM42957.1\|1176505_1177495_+	hypothetical protein	A0A1C9IHZ5	Salmonella_phage	2.9e-191	97.9
AUM39497.1\|1177509_1177782_+	hypothetical protein	A0A1B5FPA6	Escherichia_phage	2.7e-27	76.3
AUM39498.1\|1177778_1178615_+	antitermination protein	A0A1B5FPA5	Escherichia_phage	2.6e-121	77.4
AUM39499.1\|1178916_1179612_+	hypothetical protein	NA	NA	NA	NA
AUM39500.1\|1179923_1180112_+	hypothetical protein	NA	NA	NA	NA
AUM39501.1\|1180201_1180588_+	hypothetical protein	A0A192Y8P2	Salmonella_phage	1.0e-56	92.2
AUM39502.1\|1180574_1180856_+	hypothetical protein	K7PKN9	Enterobacterial_phage	7.5e-20	49.5
AUM39503.1\|1180855_1181482_+	endolysin	Q858F0	Salmonella_phage	5.1e-93	79.2
AUM39504.1\|1182039_1182390_+	HNH endonuclease	Q8SBD7	Shigella_phage	1.0e-63	96.6
AUM39505.1\|1182520_1183015_+\|terminase	terminase	Q8HAD7	Salmonella_phage	4.6e-89	100.0
AUM39506.1\|1183011_1184745_+\|terminase	terminase	Q8HAD6	Salmonella_phage	0.0e+00	99.8
AUM39507.1\|1184756_1184939_+	hypothetical protein	Q8HAD5	Salmonella_phage	1.0e-25	100.0
AUM39508.1\|1184938_1186180_+\|portal	phage portal protein	U5P411	Shigella_phage	2.9e-241	99.5
AUM39509.1\|1186157_1186808_+	primosome assembly protein PriA	U5P4H2	Shigella_phage	1.3e-115	96.3
AUM39510.1\|1186822_1188028_+\|capsid	capsid protein	A0A192Y5T6	Salmonella_phage	3.2e-221	98.3
AUM39511.1\|1188077_1188278_+	hypothetical protein	S5FNU1	Shigella_phage	1.0e-26	98.5
AUM39512.1\|1188280_1188604_+	hypothetical protein	U5P072	Shigella_phage	2.4e-54	97.2
AUM39513.1\|1188600_1189005_+\|tail	phage tail protein	A0A192Y6C2	Salmonella_phage	5.6e-53	75.4
AUM39514.1\|1188976_1189489_+	hypothetical protein	Q8HAC8	Salmonella_phage	9.6e-82	88.2
AUM39515.1\|1189485_1190043_+	hypothetical protein	A0A192Y5U4	Salmonella_phage	1.8e-97	94.0
AUM39516.1\|1190064_1190229_+	DUF2635 domain-containing protein	Q8HAC6	Salmonella_phage	2.5e-23	96.3
AUM39517.1\|1190218_1191715_+\|tail	phage tail protein	A0A192Y7L1	Salmonella_phage	2.1e-278	100.0
AUM39518.1\|1191714_1192071_+\|tail	phage tail protein	A0A192Y8K0	Salmonella_phage	2.6e-62	100.0
AUM39519.1\|1192067_1192394_+\|tail	phage tail protein	Q8HAC3	Salmonella_phage	2.3e-52	99.1
AUM39520.1\|1192478_1194407_+\|tail	phage tail tape measure protein	Q8HAC2	Salmonella_phage	0.0e+00	98.6
AUM39521.1\|1194440_1195781_+	DNA circularization protein	A0A192Y5U9	Salmonella_phage	1.1e-249	99.1
AUM39522.1\|1195777_1196836_+\|plate	baseplate protein	A0A192Y7L7	Salmonella_phage	1.3e-202	100.0
AUM39523.1\|1196835_1197369_+\|plate	baseplate assembly protein	Q8HAB9	Salmonella_phage	2.4e-96	98.9
AUM39524.1\|1197373_1197787_+	hypothetical protein	A0A192Y6D0	Salmonella_phage	3.3e-72	94.9
AUM39525.1\|1197779_1198859_+\|plate	phage baseplate protein	A0A192Y6E4	Salmonella_phage	7.0e-199	96.1
AUM39526.1\|1198861_1199449_+\|tail	phage tail protein	A0A192Y5V3	Salmonella_phage	1.0e-111	97.9
AUM39527.1\|1199435_1200554_+\|tail	phage tail protein	A0A192Y7M1	Salmonella_phage	2.3e-176	65.1
AUM39528.1\|1200553_1201141_+\|tail	phage tail protein	A0A1B0VCD0	Salmonella_phage	1.2e-104	92.3
AUM39529.1\|1201144_1201552_-\|tail	phage tail protein	A0A1B0V844	Salmonella_phage	3.0e-62	87.4
AUM39530.1\|1201694_1202258_+	DNA polymerase V subunit UmuC	I6RSM4	Salmonella_phage	2.3e-92	89.6
AUM39531.1\|1202250_1202922_-	DUF159 family protein	A0A2H4J5W2	uncultured_Caudovirales_phage	2.5e-82	61.7
AUM39532.1\|1203252_1204458_-	hypothetical protein	NA	NA	NA	NA
AUM42958.1\|1205181_1206345_-	secretion protein HlyD	NA	NA	NA	NA
1204748:1204785	attR	NA	NA	NA	NA
AUM39533.1\|1206352_1208533_-	type I secretion system permease/ATPase	F2Y302	Organic_Lake_phycodnavirus	9.9e-19	34.0
AUM39534.1\|1208529_1209939_-	type I secretion protein TolC	NA	NA	NA	NA
AUM39535.1\|1210003_1221478_-	Ig-like domain repeat protein	NA	NA	NA	NA
AUM42959.1\|1222092_1222575_-	SsrA-binding protein	W5RAM5	Staphylococcus_phage	5.2e-29	47.4
AUM39536.1\|1222724_1223201_+	ubiquinone-binding protein	NA	NA	NA	NA
AUM42960.1\|1223205_1223481_+	RnfH family protein	NA	NA	NA	NA
AUM39537.1\|1223641_1223980_-	outer membrane protein assembly factor BamE	NA	NA	NA	NA
AUM39538.1\|1224128_1225790_-	DNA repair protein RecN	NA	NA	NA	NA
AUM39539.1\|1225875_1226754_-	NAD(+) kinase	NA	NA	NA	NA
AUM39540.1\|1226750_1226912_-	inorganic polyphosphate kinase	NA	NA	NA	NA
AUM39541.1\|1226876_1227467_+	nucleotide exchange factor GrpE	NA	NA	NA	NA
AUM39542.1\|1227501_1228107_-	cytoplasmic protein	NA	NA	NA	NA
AUM39543.1\|1228236_1229478_-	magnesium/cobalt efflux protein	NA	NA	NA	NA
AUM39544.1\|1229542_1230334_-	inner membrane protein YpjD	NA	NA	NA	NA
AUM39545.1\|1230279_1230576_-	hypothetical protein	NA	NA	NA	NA
AUM39546.1\|1230499_1231861_+	signal recognition particle protein	NA	NA	NA	NA
AUM39547.1\|1232113_1232362_+	30S ribosomal protein S16	NA	NA	NA	NA
AUM42961.1\|1232380_1232929_+	ribosome maturation factor RimM	NA	NA	NA	NA
AUM39548.1\|1232973_1233741_+\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
AUM39549.1\|1233781_1234129_+	50S ribosomal protein L19	NA	NA	NA	NA
AUM39550.1\|1234284_1235505_-	diguanylate cyclase	A0A2K8I9Y5	Pseudomonas_phage	5.8e-08	36.2
AUM39551.1\|1235497_1236016_-	hypothetical protein	NA	NA	NA	NA
AUM39552.1\|1236455_1237526_+	phospho-2-dehydro-3-deoxyheptonate aldolase Tyr-sensitive	A0A0F6R6T6	Escherichia_coli_O157_typing_phage	2.4e-90	51.8
AUM39553.1\|1237535_1238657_+	bifunctional chorismate mutase/prephenate dehydrogenase	NA	NA	NA	NA
AUM39554.1\|1238714_1239623_+	gluconolactonase	NA	NA	NA	NA
AUM39555.1\|1239583_1240744_-	bifunctional chorismate mutase/prephenate dehydratase	NA	NA	NA	NA
AUM39556.1\|1240994_1241333_-	ribosomal subunit interface protein	NA	NA	NA	NA
AUM39557.1\|1241604_1242342_-	outer membrane protein assembly factor BamD	NA	NA	NA	NA
AUM39558.1\|1242473_1243454_+	ribosomal large subunit pseudouridine synthase D	NA	NA	NA	NA
AUM39559.1\|1243450_1244182_+	hypothetical protein	NA	NA	NA	NA
AUM39560.1\|1244311_1246885_+	chaperone protein ClpB	H6X3M6	Enterobacteria_phage	2.6e-127	35.5
AUM39561.1\|1247080_1247281_-	hypothetical protein	NA	NA	NA	NA
AUM39562.1\|1252811_1253267_+	cytoplasmic protein	E3SMI8	Prochlorococcus_phage	1.9e-33	49.3
AUM39563.1\|1253370_1254672_+	MFS transporter	Q6JIH2	Burkholderia_virus	3.4e-43	30.1
AUM39564.1\|1254668_1254992_-	hypothetical protein	NA	NA	NA	NA
AUM39565.1\|1255035_1256391_-	phosphatidylserine synthase	NA	NA	NA	NA
AUM39566.1\|1256505_1259166_-	protein lysine acetyltransferase Pat	NA	NA	NA	NA
AUM39567.1\|1259219_1259900_-	DTW domain-containing protein	NA	NA	NA	NA
AUM39568.1\|1259972_1260392_-	thiol disulfide reductase thioredoxin	A0A0K2FIM3	Achromobacter_phage	1.2e-16	40.6
AUM39569.1\|1260595_1261633_+\|tRNA	tRNA/rRNA methyltransferase	NA	NA	NA	NA

DBSCAN-SWA_3

1716824 : 1725996

Enterobacteria_phage(66.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUM39963.1\|1716824_1717772_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.7e-23	31.2
AUM39964.1\|1717755_1718487_+	ABC transporter permease	NA	NA	NA	NA
AUM39965.1\|1718467_1718575_-	hypothetical protein	NA	NA	NA	NA
AUM39966.1\|1718634_1719366_-	transcriptional regulator	Q9EYF2	Enterobacteria_phage	4.5e-101	87.9
AUM39967.1\|1719588_1721274_+	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	4.8e-279	91.3
AUM39968.1\|1721270_1721990_+	DNA-binding response regulator	NA	NA	NA	NA
AUM39969.1\|1722036_1722504_+	hypothetical protein	Q9EYF4	Enterobacteria_phage	3.9e-74	90.3
AUM39970.1\|1722560_1723091_-	hypothetical protein	NA	NA	NA	NA
AUM39971.1\|1723262_1723721_-	hypothetical protein	Q9EYF5	Enterobacteria_phage	7.6e-54	73.2
AUM39972.1\|1723962_1725996_-\|tRNA	methionine--tRNA ligase	A0A1V0SDF2	Indivirus	1.0e-54	27.6

DBSCAN-SWA_4

1793157 : 1804646

Bacillus_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUM40024.1\|1793157_1794561_+	colanic acid biosynthesis protein WcaM	A0A291LBB9	Klebsiella_phage	1.8e-21	27.1
AUM40025.1\|1794712_1795708_+	UDP-N-acetylglucosamine 4-epimerase	A0A1V0QG29	Shearwaterpox_virus	3.3e-09	26.0
AUM40026.1\|1795934_1796828_+	GalU regulator GalF	A0A127AW70	Bacillus_phage	3.6e-44	42.2
AUM40027.1\|1797166_1798180_+	UDP-glucose 4-epimerase	A0A2K9L1R4	Tupanvirus	1.2e-88	50.2
AUM40028.1\|1798201_1799218_+	glycosyl transferase	NA	NA	NA	NA
AUM40029.1\|1799238_1800357_+	GDP-mannose 4,6-dehydratase	M1HXY1	Acanthocystis_turfacea_Chlorella_virus	5.3e-133	65.3
AUM42978.1\|1800359_1801325_+	GDP-fucose synthetase	D1LW79	Prochlorococcus_phage	1.9e-86	50.8
AUM40030.1\|1801327_1801828_+	GDP-mannose mannosyl hydrolase	NA	NA	NA	NA
AUM40031.1\|1801820_1803269_+	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	A0A1V0SH58	Hokovirus	1.6e-57	32.5
AUM40032.1\|1803272_1804646_+	phosphomannomutase	A0A127AWJ1	Bacillus_phage	1.3e-32	27.5

DBSCAN-SWA_5

1881359 : 1888611

Morganella_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUM40104.1\|1881359_1881779_+	DNA polymerase V subunit UmuD	A0A1W6JNS2	Morganella_phage	8.5e-36	60.5
AUM40105.1\|1881781_1883050_+	DNA polymerase V subunit UmuC	I6RSM4	Salmonella_phage	2.4e-227	91.9
AUM40106.1\|1883504_1883717_+	cold-shock protein CspJ	A0A1W6JNX5	Morganella_phage	3.9e-21	70.0
AUM42981.1\|1883727_1883916_+	cold-shock protein	NA	NA	NA	NA
AUM40107.1\|1884174_1885371_-	porin	Q1MVN1	Enterobacteria_phage	1.8e-110	55.8
AUM40108.1\|1886020_1886320_+	hypothetical protein	NA	NA	NA	NA
AUM40109.1\|1886411_1887107_+	phosphohydrolase	A0A1D6Y7U0	Golden_Marseillevirus	2.8e-07	27.1
AUM40110.1\|1887180_1888611_+	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	1.0e-104	57.4

DBSCAN-SWA_6

1991279 : 2022733

Enterobacteria_phage(30.77%)

terminase,tail,protease,integrase

attL 1985724:1985738|attR 1996621:1996635

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1985724:1985738	attL	NA	NA	NA	NA
AUM40216.1\|1991279_1991510_-	DNA polymerase III subunit theta	H9C187	Pectobacterium_phage	2.9e-14	60.3
AUM40217.1\|1991647_1992022_+	hypothetical protein	NA	NA	NA	NA
AUM40218.1\|1992022_1992898_+	hypothetical protein	NA	NA	NA	NA
AUM40219.1\|1992914_1993268_+	hypothetical protein	NA	NA	NA	NA
AUM40220.1\|1993431_1993713_+	hypothetical protein	NA	NA	NA	NA
AUM40221.1\|1993650_1994730_-\|integrase	integrase	A0A2H4IYC8	uncultured_Caudovirales_phage	1.1e-100	52.5
AUM40222.1\|1994726_1995833_-	exodeoxyribonuclease 8	Q9QF34	Lambdoid_phage	3.3e-55	66.7
AUM40223.1\|1995863_1996151_+	lytic enzyme	Q8HA86	Salmonella_phage	1.9e-39	95.1
AUM40224.1\|1996147_1996681_+	hypothetical protein	A0A291LBG9	Klebsiella_phage	3.2e-11	49.4
1996621:1996635	attR	NA	NA	NA	NA
AUM40225.1\|1996937_1997105_-	lytic enzyme	NA	NA	NA	NA
AUM42986.1\|1997169_1997352_-	hypothetical protein	NA	NA	NA	NA
AUM40226.1\|1997406_1997898_+	DNA breaking-rejoining protein	Q9EYD0	Enterobacteria_phage	7.6e-44	56.2
AUM40227.1\|1997884_1998064_+\|tail	phage tail protein	Q9EYD1	Enterobacteria_phage	2.7e-07	53.2
AUM40228.1\|1998083_1998458_+\|terminase	terminase	Q8VNN7	Enterobacteria_phage	2.6e-60	83.7
AUM40229.1\|2000600_2000801_-	phage virulence factor	NA	NA	NA	NA
AUM40230.1\|2000991_2001108_-\|tail	phage tail protein	NA	NA	NA	NA
AUM40231.1\|2001370_2001496_+	arsenic transporter	NA	NA	NA	NA
AUM40232.1\|2001624_2001891_+	hypothetical protein	NA	NA	NA	NA
AUM42987.1\|2002131_2002317_+	hypothetical protein	S4TTF2	Salmonella_phage	1.1e-16	93.3
AUM40233.1\|2002643_2003258_-	disulfide bond formation protein B	NA	NA	NA	NA
AUM40234.1\|2003267_2003426_-	hypothetical protein	NA	NA	NA	NA
AUM40235.1\|2003558_2004473_-	EamA family transporter	NA	NA	NA	NA
AUM40236.1\|2005263_2005848_-	pilus assembly protein	NA	NA	NA	NA
AUM40237.1\|2005804_2005972_+	DNA polymerase V	I6RSM4	Salmonella_phage	9.5e-07	86.7
AUM40238.1\|2006577_2006799_+	hypothetical protein	NA	NA	NA	NA
AUM40239.1\|2007294_2007495_+	hypothetical protein	NA	NA	NA	NA
AUM40240.1\|2007623_2008043_+	N-acetyltransferase	NA	NA	NA	NA
AUM40241.1\|2008171_2008648_-	hypothetical protein	NA	NA	NA	NA
AUM40242.1\|2008976_2009372_-	cytoplasmic protein	C6ZCX4	Enterobacteria_phage	5.4e-16	33.6
AUM40243.1\|2010056_2010779_+	type III secretion protein SopE2	NA	NA	NA	NA
AUM40244.1\|2011452_2012103_+	serine/threonine-protein phosphatase	A0A222YWF0	Escherichia_phage	8.5e-59	51.4
AUM40245.1\|2012121_2012313_-	hypothetical protein	NA	NA	NA	NA
AUM40246.1\|2012423_2012663_-	hypothetical protein	NA	NA	NA	NA
AUM42988.1\|2012777_2014217_-	16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF	NA	NA	NA	NA
AUM40247.1\|2014294_2016928_-	MCE family protein	NA	NA	NA	NA
AUM40248.1\|2016896_2018180_-	paraquat-inducible membrane protein A	NA	NA	NA	NA
AUM40249.1\|2018308_2018806_+	Free methionine-R-sulfoxide reductase	NA	NA	NA	NA
AUM40250.1\|2018903_2019590_+	RNA chaperone ProQ	NA	NA	NA	NA
AUM40251.1\|2019609_2021658_+\|tail,protease	tail-specific protease	A0A0R6PIZ1	Moraxella_phage	8.0e-87	33.5
AUM40252.1\|2021851_2022733_+\|protease	protease HtpX	NA	NA	NA	NA

DBSCAN-SWA_7

2671114 : 2679388

Escherichia_phage(42.86%)

transposase,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUM40876.1\|2671114_2671354_+	virulence protein MsgA	K7P6H1	Enterobacteria_phage	8.5e-33	88.6
AUM40877.1\|2671571_2671736_-\|transposase	transposase	NA	NA	NA	NA
AUM43018.1\|2672233_2673043_+	cytolethal distending toxin subunit B-like protein	A5LH53	Enterobacteria_phage	2.1e-62	50.0
AUM40878.1\|2673115_2673493_+\|tail	phage tail protein	I1TQ41	Pseudomonas_phage	2.2e-14	38.4
AUM40879.1\|2673640_2674183_-	hypothetical protein	A0A0U2S643	Escherichia_phage	6.2e-71	67.0
AUM40880.1\|2674366_2675095_-	pertussis toxin-like subunit ArtA	A0A0U2KD26	Escherichia_phage	1.2e-61	52.5
AUM40881.1\|2675111_2675525_-	subtilase cytotoxin subunit B	A0A0U2KD34	Escherichia_phage	5.5e-19	37.7
AUM40882.1\|2676215_2676413_-	hypothetical protein	NA	NA	NA	NA
AUM40883.1\|2676567_2677692_-	hypothetical protein	NA	NA	NA	NA
AUM40884.1\|2678137_2679388_-	isocitrate dehydrogenase (NADP(+))	Q77Z09	Phage_21	2.0e-19	90.7

DBSCAN-SWA_8

2889739 : 3001380

112

Vibrio_phage(23.33%)

transposase,tRNA,tail,protease,portal,capsid,plate,integrase,terminase

attL 2994962:2994976|attR 3007961:3007975

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUM41088.1\|2889739_2890423_-\|transposase	transposase	Q6H9S3	Enterobacteria_phage	4.1e-19	35.2
AUM41089.1\|2890593_2890995_-\|transposase	transposase	NA	NA	NA	NA
AUM41090.1\|2891107_2891392_-	integration host factor subunit beta	A7KV42	Bacillus_phage	4.1e-10	40.2
AUM41091.1\|2891547_2893221_-	30S ribosomal protein S1	NA	NA	NA	NA
AUM41092.1\|2893334_2894018_-	cytidylate kinase	NA	NA	NA	NA
AUM41093.1\|2894190_2894952_-\|protease	metalloprotease	NA	NA	NA	NA
AUM41094.1\|2895094_2896378_-	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA
AUM41095.1\|2896448_2897537_-	3-phosphoserine/phosphohydroxythreonine aminotransferase	M1Q1P2	Streptococcus_phage	2.8e-78	46.5
AUM41096.1\|2897722_2898415_-	DUF421 domain-containing protein	NA	NA	NA	NA
AUM43025.1\|2898542_2900312_+	ribosomal protein S12 methylthiotransferase accessory factor YcaO	NA	NA	NA	NA
AUM41097.1\|2900716_2901574_+	formate transporter FocA	NA	NA	NA	NA
AUM41098.1\|2901633_2903916_+	formate acetyltransferase	A0A2P0VNR5	Tetraselmis_virus	1.1e-161	42.0
AUM41099.1\|2903987_2904947_-	pathogenicity island 1 protein SopD2	NA	NA	NA	NA
AUM41100.1\|2905522_2906320_+	pyruvate formate lyase 1-activating protein	A0A2P0VNQ0	Tetraselmis_virus	2.7e-22	26.5
AUM41101.1\|2906601_2908023_-	transporter	NA	NA	NA	NA
AUM41102.1\|2908240_2909389_-	MFS transporter	NA	NA	NA	NA
AUM41103.1\|2909738_2910602_-	dimethyl sulfoxide reductase	NA	NA	NA	NA
AUM41104.1\|2910603_2911221_-	dimethylsulfoxide reductase, chain B	A0A077SL61	Escherichia_phage	1.6e-75	59.1
AUM41105.1\|2911231_2913676_-	dimethyl sulfoxide reductase subunit A	A0A077SK27	Escherichia_phage	5.4e-223	50.5
AUM41106.1\|2913913_2915206_-\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	7.3e-94	44.9
AUM41107.1\|2915464_2916808_-	recombination factor protein RarA	G3MBE0	Bacillus_virus	4.8e-80	41.0
AUM41108.1\|2916817_2917429_-	outer membrane lipoprotein carrier protein LolA	NA	NA	NA	NA
AUM43026.1\|2917571_2921606_-	DNA translocase FtsK	S5VNE3	Mycobacterium_phage	2.9e-88	49.5
AUM41109.1\|2921740_2922235_-	leucine-responsive regulatory protein	NA	NA	NA	NA
AUM41110.1\|2922163_2922439_+	hypothetical protein	NA	NA	NA	NA
AUM41111.1\|2922781_2923750_+	thioredoxin-disulfide reductase	A0A2I2L5E1	Orpheovirus	6.5e-63	45.5
AUM41112.1\|2923864_2925631_+	thiol reductant ABC exporter subunit CydD	W8CYL7	Bacillus_phage	6.0e-22	25.1
AUM41113.1\|2925631_2927353_+	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	W8CYL7	Bacillus_phage	6.4e-13	23.5
AUM41114.1\|2927397_2928102_+\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
AUM41115.1\|2928102_2928486_+	hypothetical protein	NA	NA	NA	NA
AUM41116.1\|2928413_2928632_+	translation initiation factor IF-1	NA	NA	NA	NA
AUM41117.1\|2928722_2929634_-	LysR family transcriptional regulator	NA	NA	NA	NA
AUM41118.1\|2929742_2930603_+	quercetin 2,3-dioxygenase	NA	NA	NA	NA
AUM41119.1\|2930622_2931300_+	hydrolase	NA	NA	NA	NA
AUM41120.1\|2931602_2931788_+	hypothetical protein	NA	NA	NA	NA
AUM41121.1\|2931907_2934184_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	6.2e-165	42.3
AUM41122.1\|2934214_2934535_-\|protease	ATP-dependent Clp protease adaptor ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	4.5e-13	45.7
AUM41123.1\|2934858_2935080_+	cold shock domain protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	9.3e-18	64.2
AUM41124.1\|2935209_2937156_-	macrolide ABC transporter permease/ATP-binding protein MacB	G9BWD6	Planktothrix_phage	9.1e-40	42.3
AUM41125.1\|2937152_2938271_-	macrolide transporter subunit MacA	A0A140XAI1	Dickeya_phage	1.4e-08	38.9
AUM41126.1\|2938416_2939367_+	VirK protein	NA	NA	NA	NA
AUM41127.1\|2939363_2941022_-	ATP-dependent endonuclease	NA	NA	NA	NA
AUM41128.1\|2941222_2942122_+	hypothetical protein	NA	NA	NA	NA
AUM41129.1\|2942265_2943918_+	hydroxylamine reductase	NA	NA	NA	NA
AUM41130.1\|2943926_2944898_+	hybrid-cluster NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
AUM41131.1\|2945055_2946774_+	pyruvate oxidase	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	8.3e-29	24.2
AUM41132.1\|2946812_2947814_+	low-specificity L-threonine aldolase	NA	NA	NA	NA
AUM41133.1\|2947824_2949258_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
AUM41134.1\|2949353_2950367_+	hypothetical protein	NA	NA	NA	NA
AUM41135.1\|2950363_2951194_-	N-acetylmuramoyl-L-alanine amidase	A0A1B0UZW5	Roseobacter_phage	2.3e-08	30.7
AUM41136.1\|2951190_2951514_-	hypothetical protein	NA	NA	NA	NA
AUM41137.1\|2952467_2953781_+	GGDEF domain-containing protein	A0A127AWB9	Bacillus_phage	1.5e-17	32.4
AUM41138.1\|2954254_2955526_+	MFS transporter	NA	NA	NA	NA
AUM41139.1\|2957795_2959004_+\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	4.3e-48	45.7
AUM41140.1\|2959106_2959961_-	protein YibB	NA	NA	NA	NA
AUM41141.1\|2960678_2961251_-\|tail	phage tail protein	A0A0M4RTP2	Salmonella_phage	1.9e-78	74.5
AUM41142.1\|2961265_2962078_-\|tail	phage tail protein	A0A0M4QWS3	Salmonella_phage	8.5e-117	78.6
AUM41143.1\|2963937_2964519_-\|tail	phage tail protein I	V9IQK7	Stenotrophomonas_phage	1.5e-19	34.8
AUM41144.1\|2964511_2965636_-\|plate	baseplate J protein	A0A0C5AEG2	Bacteriophage	2.1e-89	45.0
AUM41145.1\|2965632_2965956_-	hypothetical protein	A0A067ZJ13	Vibrio_phage	1.0e-12	40.4
AUM41146.1\|2965952_2966420_-	hypothetical protein	NA	NA	NA	NA
AUM41147.1\|2966416_2967037_-\|plate	baseplate assembly protein	A0A067ZIM2	Vibrio_phage	7.6e-33	55.5
AUM41148.1\|2967037_2968039_-	late control D family protein	A0A0C5AJ59	Bacteriophage	1.9e-57	37.2
AUM41149.1\|2968028_2968247_-	hypothetical protein	A0A0C5AEF4	Bacteriophage	1.4e-10	50.0
AUM41150.1\|2968239_2970696_-\|tail	phage tail tape measure protein	A0A097I4X9	Vibrio_phage	5.0e-43	26.1
AUM41151.1\|2970850_2971132_-	hypothetical protein	NA	NA	NA	NA
AUM41152.1\|2971141_2971663_-\|tail	phage tail protein	A0A067ZJA9	Vibrio_phage	1.2e-47	53.2
AUM41153.1\|2971675_2973145_-\|tail	phage tail protein	A0A059WKP9	Vibrio_phage	1.1e-146	54.3
AUM41154.1\|2973144_2973444_-	hypothetical protein	NA	NA	NA	NA
AUM41155.1\|2973443_2973929_-	hypothetical protein	A0A067ZIL8	Vibrio_phage	2.9e-19	40.9
AUM41156.1\|2973925_2974270_-	sugar transporter	A0A067ZJA6	Vibrio_phage	2.0e-19	44.9
AUM41157.1\|2974266_2974719_-	hypothetical protein	NA	NA	NA	NA
AUM41158.1\|2974719_2975763_-\|capsid	capsid protein	A0A059WRQ2	Vibrio_phage	7.5e-73	45.5
AUM41159.1\|2975774_2976161_-	hypothetical protein	NA	NA	NA	NA
AUM41160.1\|2976171_2977236_-	peptidase S14	A0A067ZG37	Vibrio_phage	9.3e-79	47.8
AUM41161.1\|2977228_2978791_-\|portal	phage portal protein	A0A067ZJA4	Vibrio_phage	6.1e-188	64.5
AUM41162.1\|2978787_2979027_-	hypothetical protein	A0A067ZJ01	Vibrio_phage	6.8e-14	54.8
AUM41163.1\|2979038_2980898_-\|terminase	terminase	A0A059WKL6	Vibrio_phage	6.7e-234	64.4
AUM41164.1\|2980903_2981452_-	hypothetical protein	A0A067ZIZ9	Vibrio_phage	1.4e-14	35.2
AUM41165.1\|2981451_2982042_-	nuclease	A0A067ZI74	Vibrio_phage	2.9e-37	54.4
AUM43027.1\|2982590_2983310_-	hypothetical protein	NA	NA	NA	NA
AUM41166.1\|2983585_2983879_-	hypothetical protein	Q8W634	Enterobacteria_phage	3.5e-28	62.2
AUM41167.1\|2984305_2984761_-	hypothetical protein	A0A0M4RD57	Salmonella_phage	3.3e-25	51.0
AUM41168.1\|2985273_2985804_-	lysozyme	H6WRZ4	Salmonella_phage	1.0e-54	57.5
AUM41169.1\|2985806_2986046_-	hypothetical protein	NA	NA	NA	NA
AUM41170.1\|2987149_2987455_+	hypothetical protein	NA	NA	NA	NA
AUM41171.1\|2987447_2987894_+	hypothetical protein	NA	NA	NA	NA
AUM41172.1\|2987811_2988069_-	hypothetical protein	Q8HA88	Salmonella_phage	1.8e-33	81.0
AUM41173.1\|2988201_2989038_-	antitermination protein	A0A1B5FPA5	Escherichia_phage	1.9e-127	80.1
AUM41174.1\|2989034_2990006_-	DNA primase	A0A1B5FPA8	Escherichia_phage	1.7e-159	83.9
AUM41175.1\|2990002_2991619_-	helicase	A0A286N2P9	Klebsiella_phage	1.1e-245	74.3
AUM41176.1\|2991629_2992004_-	hypothetical protein	A0A1B5FPB1	Escherichia_phage	4.3e-23	47.5
AUM41177.1\|2992254_2992548_-	hypothetical protein	A0A1B5FPB9	Escherichia_phage	5.4e-37	79.4
AUM41178.1\|2992549_2992765_-	transcriptional regulator	NA	NA	NA	NA
AUM41179.1\|2992875_2993535_+	phage repressor	C6ZR47	Salmonella_phage	2.4e-93	70.8
AUM41180.1\|2993716_2993929_+	hypothetical protein	NA	NA	NA	NA
AUM41181.1\|2993929_2994121_+	hypothetical protein	NA	NA	NA	NA
AUM41182.1\|2994194_2994389_+	hypothetical protein	NA	NA	NA	NA
AUM41183.1\|2994385_2994571_+	hypothetical protein	NA	NA	NA	NA
AUM41184.1\|2994758_2994968_+	hypothetical protein	NA	NA	NA	NA
AUM41185.1\|2994948_2995308_+	hypothetical protein	A0A1B5FPB3	Escherichia_phage	2.3e-26	52.9
2994962:2994976	attL	NA	NA	NA	NA
AUM41186.1\|2995307_2995505_+	hypothetical protein	A0A1B5FPB7	Escherichia_phage	7.3e-14	58.5
AUM41187.1\|2995501_2995909_+	hypothetical protein	A0A286S1S2	Klebsiella_phage	2.2e-44	67.2
AUM41188.1\|2995920_2996676_+	hypothetical protein	A0A1B5FPC0	Escherichia_phage	5.1e-124	88.4
AUM41189.1\|2996672_2997239_+	hypothetical protein	A0A088C4R7	Shewanella_sp._phage	2.2e-26	37.8
AUM41190.1\|2997235_2997481_+	hypothetical protein	NA	NA	NA	NA
AUM43028.1\|2997489_2997735_+	hypothetical protein	NA	NA	NA	NA
AUM43029.1\|2997776_2998061_+	hypothetical protein	NA	NA	NA	NA
AUM41191.1\|2998218_2998461_+	excisionase	A0A286S2A4	Klebsiella_phage	8.1e-23	68.4
AUM43030.1\|2998513_2999812_+\|integrase	integrase	Q20GI2	Phage_258-320	5.1e-164	64.5
AUM41192.1\|2999907_3000423_+	lipoprotein	NA	NA	NA	NA
AUM41193.1\|3000651_3001380_+	arginine ABC transporter ATP-binding protein ArtP	G9BWD6	Planktothrix_phage	5.1e-28	35.8
3007961:3007975	attR	NA	NA	NA	NA

DBSCAN-SWA_9

3021382 : 3027460

Salmonella_phage(87.5%)

tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUM41215.1\|3021382_3021838_-\|tail	phage tail protein	E5G6Q2	Salmonella_phage	7.5e-62	99.2
AUM41216.1\|3024671_3024995_-	hypothetical protein	A0A1S6KVH3	Escherichia_phage	6.2e-10	45.9
AUM41217.1\|3024991_3025219_-	hypothetical protein	A0A1S6L007	Salmonella_phage	2.4e-32	88.0
AUM41218.1\|3025211_3025430_-	hypothetical protein	A0A1S6L021	Salmonella_phage	9.2e-26	93.8
AUM41219.1\|3025497_3025839_-	hypothetical protein	A0A1S6L019	Salmonella_phage	4.8e-53	95.6
AUM41220.1\|3025883_3026003_-	hypothetical protein	A0A1S6L005	Salmonella_phage	2.5e-17	94.9
AUM41221.1\|3026010_3026520_-	hypothetical protein	A0A1S6L008	Salmonella_phage	2.9e-78	88.2
AUM41222.1\|3026552_3026774_-	regulator	NA	NA	NA	NA
AUM41223.1\|3026869_3027460_+	phage repressor protein	A0A1S6KZZ7	Salmonella_phage	6.1e-40	40.3

DBSCAN-SWA_10

3120916 : 3160986

Salmonella_phage(63.33%)

tail,portal,integrase,terminase,coat,lysis

attL 3120462:3120484|attR 3161052:3161074

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3120462:3120484	attL	NA	NA	NA	NA
AUM41303.1\|3120916_3121279_+	translocase	A0A192Y6N5	Salmonella_phage	6.2e-59	95.0
AUM41304.1\|3121275_3122193_+	glycosyltransferase	I1TED8	Salmonella_phage	6.4e-161	92.4
AUM41305.1\|3122189_3123614_+	hypothetical protein	F1C5A9	Cronobacter_phage	1.2e-33	28.1
AUM41306.1\|3123652_3126049_-	hypothetical protein	Q9AYY6	Salmonella_phage	8.8e-53	78.8
AUM41307.1\|3126184_3126433_+	hypothetical protein	Q76H48	Enterobacteria_phage	1.8e-38	100.0
AUM43035.1\|3126453_3126747_-	hypothetical protein	Q76H12	Enterobacteria_phage	3.2e-50	100.0
AUM41308.1\|3126885_3128796_-	DNA transfer protein	I1TEJ6	Salmonella_phage	0.0e+00	90.8
AUM43036.1\|3128795_3130133_-	DNA transfer protein	A0A1R3Y5Q4	Salmonella_virus	3.2e-238	98.0
AUM41309.1\|3130175_3130865_-	DNA transfer protein	B9UDK9	Salmonella_phage	3.7e-89	82.1
AUM41310.1\|3130867_3131323_-	hypothetical protein	I6R0L6	Salmonella_phage	8.8e-87	99.3
AUM41311.1\|3131322_3132024_-\|tail	phage tail protein	A0A192Y6T9	Salmonella_phage	2.0e-74	95.7
AUM41312.1\|3132027_3133446_-	hypothetical protein	A0A075B8I2	Enterobacteria_phage	6.6e-274	98.1
AUM41313.1\|3133405_3133906_-	hypothetical protein	Q76H19	Enterobacteria_phage	5.5e-90	98.8
AUM41314.1\|3133889_3134099_-	hypothetical protein	A0A192Y697	Salmonella_phage	1.3e-32	100.0
AUM41315.1\|3134137_3135430_-\|coat	coat protein	I1TEI8	Salmonella_phage	9.4e-243	99.8
AUM41316.1\|3135429_3136341_-	scaffolding protein	A0A192Y6T4	Salmonella_phage	1.2e-159	99.0
AUM41317.1\|3136354_3138532_-\|portal	portal protein	A0A2H4FNE2	Salmonella_phage	0.0e+00	98.6
AUM41318.1\|3138531_3140031_-\|terminase	terminase	A0A192Y824	Salmonella_phage	1.4e-306	99.8
AUM41319.1\|3140008_3140497_-	DNA-packaging protein	A8CGG1	Salmonella_phage	2.9e-88	100.0
AUM41320.1\|3140520_3140700_-	hypothetical protein	Q9AZ02	Salmonella_phage	3.2e-24	96.6
AUM41321.1\|3140701_3140944_-	hypothetical protein	A5VW77	Enterobacteria_phage	1.3e-36	100.0
AUM41322.1\|3141137_3141680_-	Rha family transcriptional regulator	A5VW78	Enterobacteria_phage	7.2e-96	96.7
AUM41323.1\|3141878_3142316_-\|lysis	lysis protein	A0A220NRM0	Escherichia_phage	1.3e-71	97.9
AUM43037.1\|3142312_3142810_-	lysozyme	A0A1R3Y5W5	Salmonella_virus	7.1e-90	97.6
AUM41324.1\|3142787_3142991_-	hypothetical protein	I6R0S9	Salmonella_phage	1.1e-33	100.0
AUM41325.1\|3143483_3143972_-	antiterminator	I6S672	Salmonella_phage	3.0e-77	87.0
AUM41326.1\|3143968_3144148_-	hypothetical protein	A0A1V0E5I7	Salmonella_phage	1.6e-23	98.3
AUM41327.1\|3144128_3144332_-	protein ninH	A0A1V0E5I5	Salmonella_phage	1.2e-30	91.0
AUM41328.1\|3144328_3144934_-	protein NinG	G9L693	Escherichia_phage	2.0e-94	95.5
AUM41329.1\|3144934_3145153_-	hypothetical protein	Q5G8S1	Enterobacteria_phage	7.0e-34	98.6
AUM41330.1\|3145133_3145316_-	NinF family protein	Q5G8S2	Enterobacteria_phage	2.2e-28	95.0
AUM41331.1\|3145312_3145489_-	hypothetical protein	Q5G8S3	Enterobacteria_phage	3.0e-27	100.0
AUM41332.1\|3145455_3145629_-	protein ninD	Q8HAF7	Salmonella_phage	3.7e-30	94.7
AUM41333.1\|3145625_3146072_-	protein ninB	I6R0N7	Salmonella_phage	1.3e-79	98.0
AUM41334.1\|3146085_3146325_-	hypothetical protein	E7C9R7	Salmonella_phage	1.2e-31	86.1
AUM41335.1\|3146327_3146621_-	hypothetical protein	A0A220NQX3	Salmonella_phage	4.6e-20	54.6
AUM41336.1\|3146799_3147006_-	hypothetical protein	I6RSI5	Salmonella_phage	1.1e-31	100.0
AUM41337.1\|3147078_3147384_-	hypothetical protein	NA	NA	NA	NA
AUM41338.1\|3147380_3148244_-	ATP-binding protein	K7PLU3	Enterobacteria_phage	5.3e-109	68.1
AUM41339.1\|3148228_3149116_-	hypothetical protein	G8C7U5	Escherichia_phage	2.1e-108	73.2
AUM41340.1\|3149126_3149927_-	HNH endonuclease	A0A125RNK0	Pseudomonas_phage	2.0e-65	50.4
AUM41341.1\|3149948_3150239_-	hypothetical protein	I6RSP4	Salmonella_phage	4.5e-44	97.9
AUM41342.1\|3150375_3150603_-	DNA-binding protein	G9L677	Escherichia_phage	2.1e-33	89.3
AUM41343.1\|3150680_3151391_+	phage repressor protein C	G9L676	Escherichia_phage	3.4e-117	87.3
AUM41344.1\|3151403_3151658_+	hypothetical protein	A0A192Y6S0	Salmonella_phage	2.9e-07	89.3
AUM41345.1\|3151748_3151994_+	hypothetical protein	NA	NA	NA	NA
AUM41346.1\|3152032_3152242_-	hypothetical protein	I6R0R9	Salmonella_phage	4.7e-27	89.9
AUM41347.1\|3152620_3153004_+	antitermination protein	C6ZR44	Salmonella_phage	1.2e-36	84.5
AUM43038.1\|3153111_3153864_+	hypothetical protein	I6S1T3	Salmonella_phage	7.1e-33	90.4
AUM41348.1\|3154056_3154257_+	hypothetical protein	A0A2H4FQS9	Salmonella_phage	1.6e-29	92.4
AUM41349.1\|3154465_3154612_+	hypothetical protein	E7C9Q3	Salmonella_phage	1.3e-20	100.0
AUM41350.1\|3154604_3154718_+	hypothetical protein	C6ZR39	Salmonella_phage	2.3e-12	97.3
AUM41351.1\|3154714_3154903_+	hypothetical protein	C6ZR38	Salmonella_phage	6.5e-28	96.8
AUM41352.1\|3154911_3155619_+	recombinase	A0A2H4FN95	Salmonella_phage	2.2e-137	98.7
AUM41353.1\|3155618_3155903_+	RecBCD nuclease inhibitor	E7C9P9	Salmonella_phage	9.8e-44	96.8
AUM41354.1\|3155949_3156243_+	RecBCD nuclease inhibitor	A0A0N7CAQ6	Salmonella_phage	6.8e-48	95.9
AUM41355.1\|3156253_3156424_+	hypothetical protein	I6S642	Salmonella_phage	6.1e-25	100.0
AUM41356.1\|3156420_3156852_+	hypothetical protein	A0A1R3Y5S0	Salmonella_virus	7.0e-17	93.8
AUM41357.1\|3157690_3158164_+	SAM-dependent methyltransferase	H9C170	Pectobacterium_phage	1.5e-68	79.6
AUM41358.1\|3158167_3158791_+	hypothetical protein	K7PGV7	Enterobacterial_phage	1.3e-53	83.9
AUM41359.1\|3159719_3159938_+	excisionase	A0A1V0E5M4	Salmonella_phage	5.7e-36	100.0
AUM41360.1\|3159915_3160986_+\|integrase	integrase	A0A1V0E5M7	Salmonella_phage	6.8e-154	99.3
3161052:3161074	attR	NA	NA	NA	NA

DBSCAN-SWA_11

3899393 : 3990455

121

Pseudomonas_phage(21.74%)

transposase,tail,plate,integrase,terminase,head

attL 3981412:3981429|attR 3986946:3986963

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUM42005.1\|3899393_3900032_-	hypothetical protein	A0A2I7S9A5	Vibrio_phage	1.1e-07	36.8
AUM42006.1\|3900214_3900451_+	DNA-binding protein	A0A2D1GNH1	Pseudomonas_phage	6.1e-15	52.1
AUM42007.1\|3900450_3902478_+\|transposase	transposase	A0A2D1GNK9	Pseudomonas_phage	6.8e-155	44.1
AUM42008.1\|3902490_3903426_+	ATPase	A0A2D1GNS0	Pseudomonas_phage	7.9e-74	51.5
AUM42009.1\|3903440_3903770_+	hypothetical protein	NA	NA	NA	NA
AUM42010.1\|3903788_3904013_+	hypothetical protein	NA	NA	NA	NA
AUM42011.1\|3904027_3904303_+	hypothetical protein	NA	NA	NA	NA
AUM42012.1\|3904359_3904611_+	hypothetical protein	NA	NA	NA	NA
AUM42013.1\|3904624_3904807_+	hypothetical protein	NA	NA	NA	NA
AUM42014.1\|3904851_3905043_+	hypothetical protein	NA	NA	NA	NA
AUM42015.1\|3905058_3905583_+	host-nuclease inhibitor protein Gam	C9DGL8	Escherichia_phage	3.2e-64	71.3
AUM42016.1\|3905584_3905818_+	hypothetical protein	NA	NA	NA	NA
AUM42017.1\|3905798_3905990_+	hypothetical protein	A0A2D1GNV5	Pseudomonas_phage	2.8e-10	54.4
AUM42018.1\|3906071_3906638_+	hypothetical protein	NA	NA	NA	NA
AUM42019.1\|3906759_3907020_+	hypothetical protein	A0A2I7R260	Vibrio_phage	1.3e-07	45.9
AUM42020.1\|3907012_3907726_+	hypothetical protein	NA	NA	NA	NA
AUM42021.1\|3907725_3907947_+	hypothetical protein	NA	NA	NA	NA
AUM42022.1\|3907943_3908168_+	hypothetical protein	NA	NA	NA	NA
AUM43069.1\|3908191_3908440_+	hypothetical protein	T1S9K2	Salmonella_phage	7.0e-14	50.0
AUM42023.1\|3908429_3908702_+	hypothetical protein	NA	NA	NA	NA
AUM42024.1\|3908698_3908995_+	hypothetical protein	Q8HAA6	Salmonella_phage	9.3e-05	68.4
AUM42025.1\|3908998_3909286_+	hypothetical protein	A0A075B8H2	Enterobacteria_phage	1.7e-19	67.1
AUM42026.1\|3909373_3909760_+	hypothetical protein	NA	NA	NA	NA
AUM42027.1\|3909893_3910289_+	GemA protein	H6V8M4	Pseudomonas_phage	3.5e-23	45.2
AUM42028.1\|3910288_3910744_+	hypothetical protein	A0A0A1IWZ1	Pseudomonas_phage	3.0e-18	34.2
AUM42029.1\|3910827_3911217_+	peptidase M15	A0A0A7NQ86	Enterobacteria_phage	6.9e-48	69.5
AUM43070.1\|3911257_3911491_+	hypothetical protein	NA	NA	NA	NA
AUM42030.1\|3911471_3911942_+	hypothetical protein	NA	NA	NA	NA
AUM42031.1\|3912131_3912401_+	hypothetical protein	NA	NA	NA	NA
AUM42032.1\|3912400_3912919_+	hypothetical protein	A0A0M3VI86	Ralstonia_phage	2.6e-26	39.0
AUM42033.1\|3912911_3913181_+	hypothetical protein	NA	NA	NA	NA
AUM42034.1\|3913170_3913368_+	hypothetical protein	NA	NA	NA	NA
AUM42035.1\|3913371_3913563_-	hypothetical protein	NA	NA	NA	NA
AUM42036.1\|3913643_3915320_+	hypothetical protein	B7SDN0	Haemophilus_phage	2.3e-156	53.0
AUM42037.1\|3915319_3916852_+	hypothetical protein	A0A0A1IVG5	Pseudomonas_phage	2.0e-98	40.7
AUM42038.1\|3916844_3918092_+\|head	phage head morphogenesis protein	A0A0M4UTA3	Ralstonia_phage	2.4e-62	39.7
AUM43071.1\|3918106_3918583_+	phage morphogenesis protein	NA	NA	NA	NA
AUM43072.1\|3918841_3919957_+	hypothetical protein	A0A2D1GNS3	Pseudomonas_phage	1.2e-44	38.1
AUM42039.1\|3919943_3920357_+	hypothetical protein	A0A2H4IZH5	uncultured_Caudovirales_phage	5.4e-27	45.8
AUM42040.1\|3920368_3921295_+\|head	head protein	A0A2P9JZJ2	Alteromonadaceae_phage	3.2e-99	57.7
AUM42041.1\|3921297_3921738_+	hypothetical protein	NA	NA	NA	NA
AUM42042.1\|3921737_3922379_+	hypothetical protein	NA	NA	NA	NA
AUM42043.1\|3922371_3922617_+	hypothetical protein	NA	NA	NA	NA
AUM42044.1\|3922613_3924053_+\|tail	phage tail protein	A0A0M3LQC3	Mannheimia_phage	5.8e-84	40.1
AUM42045.1\|3924063_3924435_+\|tail	phage tail protein	F6MIK8	Haemophilus_phage	9.5e-23	46.7
AUM42046.1\|3924438_3924813_+	hypothetical protein	NA	NA	NA	NA
AUM42047.1\|3924955_3927265_+	hypothetical protein	NA	NA	NA	NA
AUM42048.1\|3927261_3928599_+	hypothetical protein	F6MIL2	Haemophilus_phage	1.7e-29	26.5
AUM42049.1\|3928582_3929680_+\|tail	phage tail protein	A0A2H4J9E6	uncultured_Caudovirales_phage	2.4e-77	42.1
AUM42050.1\|3929679_3930342_+\|plate	phage baseplate protein	A0A0M3LPA3	Mannheimia_phage	2.4e-40	40.2
AUM42051.1\|3930413_3930761_+	hypothetical protein	A0A0M3LQK5	Mannheimia_phage	2.4e-20	49.1
AUM42052.1\|3930761_3931850_+\|tail	phage tail protein	A0A0M3LQN4	Mannheimia_phage	3.3e-63	41.4
AUM42053.1\|3931846_3932437_+\|tail	phage tail protein	A0A2P9JZK7	Alteromonadaceae_phage	3.4e-22	37.3
AUM42054.1\|3932433_3933360_+\|tail	phage tail protein	E5G6P0	Salmonella_phage	2.0e-45	73.9
AUM42055.1\|3934182_3934764_+\|tail	tail assembly chaperone	A0A0M4RTP2	Salmonella_phage	1.1e-78	75.0
AUM42056.1\|3934789_3934936_+	DUF1378 domain-containing protein	S5MBZ5	Escherichia_phage	9.2e-06	53.3
AUM42057.1\|3935088_3935859_+	modification methylase	A2I2Y7	Vibrio_virus	1.2e-96	64.1
AUM42058.1\|3936394_3936991_+	phenylacetic acid degradation protein PaaY	NA	NA	NA	NA
AUM42059.1\|3937067_3937463_-	transcriptional activator CaiF	NA	NA	NA	NA
AUM42060.1\|3937736_3940964_-	carbamoyl-phosphate synthase large chain	NA	NA	NA	NA
AUM42061.1\|3940982_3942131_-	carbamoyl-phosphate synthase small subunit	R4TGJ8	Halovirus	1.5e-50	33.3
AUM42062.1\|3943175_3943997_-	4-hydroxy-tetrahydrodipicolinate reductase	NA	NA	NA	NA
AUM42063.1\|3944176_3945085_-	triphosphoribosyl-dephospho-CoA synthase	NA	NA	NA	NA
AUM42064.1\|3945062_3945614_-	phosphoribosyl-dephospho-CoA transferase	NA	NA	NA	NA
AUM42065.1\|3945613_3947134_-	citrate lyase subunit alpha	NA	NA	NA	NA
AUM42066.1\|3947144_3948014_-	citrate (pro-3S)-lyase subunit beta	NA	NA	NA	NA
AUM42067.1\|3948010_3948304_-	citrate lyase ACP	NA	NA	NA	NA
AUM42068.1\|3948333_3949377_-	[citrate (pro-3S)-lyase] ligase	NA	NA	NA	NA
AUM42069.1\|3949621_3950962_+	citrate:sodium symporter	NA	NA	NA	NA
AUM42070.1\|3951120_3951360_+	oxaloacetate decarboxylase subunit gamma	NA	NA	NA	NA
AUM42071.1\|3951375_3953145_+	oxaloacetate decarboxylase subunit alpha	NA	NA	NA	NA
AUM42072.1\|3953157_3954459_+	oxalacetate decarboxylase subunit beta	NA	NA	NA	NA
AUM42073.1\|3955616_3956198_-	DNA-invertase	A0A0A7NPV4	Enterobacteria_phage	5.8e-67	71.5
AUM43073.1\|3956247_3956766_+\|tail	phage tail protein	A0A0F7LCR3	Escherichia_phage	6.1e-68	71.5
AUM42074.1\|3956765_3957374_+\|tail	tail assembly chaperone	A0A218M4J2	Erwinia_phage	8.8e-66	61.9
AUM42075.1\|3958897_3959476_-\|tail	phage tail protein I	A4JWL7	Burkholderia_virus	1.5e-67	66.8
AUM42076.1\|3959468_3960572_-\|plate	baseplate protein	A4JWL6	Burkholderia_virus	1.2e-105	53.5
AUM42077.1\|3960562_3960910_-\|plate	baseplate protein	Q6QIA0	Burkholderia_phage	7.8e-35	63.3
AUM42078.1\|3960964_3961477_-\|plate	baseplate protein	A4JWL4	Burkholderia_virus	4.7e-20	38.3
AUM42079.1\|3961476_3962646_-	phage protein D	Q6QIA2	Burkholderia_phage	2.0e-87	49.4
AUM42080.1\|3962633_3962849_-	hypothetical protein	Q6QIA3	Burkholderia_phage	1.6e-17	57.1
AUM42081.1\|3962845_3963730_-	hypothetical protein	A4JWL1	Burkholderia_virus	3.1e-51	47.9
AUM42082.1\|3963729_3966195_-\|tail	phage tail tape measure protein	A4JWL0	Burkholderia_virus	7.7e-169	42.4
AUM42083.1\|3966390_3966705_-	hypothetical protein	NA	NA	NA	NA
AUM42084.1\|3966803_3967085_-	hypothetical protein	NA	NA	NA	NA
AUM42085.1\|3967087_3967609_-\|tail	phage major tail tube protein	A4JWK6	Burkholderia_virus	1.0e-67	68.8
AUM42086.1\|3967608_3969036_-\|tail	phage tail protein	A4JWK5	Burkholderia_virus	7.5e-217	78.2
AUM42087.1\|3969025_3969280_-	hypothetical protein	NA	NA	NA	NA
AUM42088.1\|3969276_3969741_-	hypothetical protein	Q6QIB2	Burkholderia_phage	4.1e-39	51.7
AUM42089.1\|3969740_3970187_-	hypothetical protein	A4JWK2	Burkholderia_virus	1.1e-33	51.7
AUM42090.1\|3970188_3970545_-	DUF2190 domain-containing protein	NA	NA	NA	NA
AUM42091.1\|3970555_3971509_-	hypothetical protein	A4JWK0	Burkholderia_virus	9.9e-64	43.6
AUM42092.1\|3971522_3972620_-	peptidase	A4JWJ9	Burkholderia_virus	2.0e-97	50.1
AUM42093.1\|3972833_3973292_-	phage virion morphogenesis protein	Q6QIB8	Burkholderia_phage	4.9e-29	43.0
AUM42094.1\|3973294_3974116_-\|head	phage head morphogenesis protein	Q6QIB9	Burkholderia_phage	9.9e-97	61.2
AUM42095.1\|3974096_3975593_-	hypothetical protein	Q6QIC0	Burkholderia_phage	1.0e-171	60.2
AUM42096.1\|3975592_3977116_-	hypothetical protein	A4JWJ4	Burkholderia_virus	5.8e-183	62.4
AUM42097.1\|3977112_3977658_-\|terminase	terminase	A4JWJ3	Burkholderia_virus	2.7e-58	67.0
AUM42098.1\|3977657_3977969_-	hypothetical protein	A0A0S4L0A3	Pseudomonas_phage	3.2e-32	63.6
AUM42099.1\|3977961_3978294_-	hypothetical protein	Q6QIC4	Burkholderia_phage	1.1e-17	47.7
AUM42100.1\|3978290_3978941_-	hypothetical protein	A0A0S4L1H0	Pseudomonas_phage	6.2e-09	32.0
AUM42101.1\|3978924_3979653_-	lytic murein transglycosylase	Q5ZQZ1	Pseudomonas_phage	3.7e-63	59.2
AUM42102.1\|3979655_3980006_-	hypothetical protein	A4JWP3	Burkholderia_virus	1.2e-22	53.9
AUM43074.1\|3980224_3980461_+	hypothetical protein	NA	NA	NA	NA
AUM42103.1\|3980381_3980948_-	DUF2441 domain-containing protein	NA	NA	NA	NA
AUM42104.1\|3981191_3981962_+	restriction endonuclease subunit M	A2I2Y7	Vibrio_virus	9.0e-100	66.1
3981412:3981429	attL	NA	NA	NA	NA
AUM42105.1\|3982019_3982286_+	hypothetical protein	NA	NA	NA	NA
AUM42106.1\|3982406_3982772_-	transcriptional regulator	NA	NA	NA	NA
AUM42107.1\|3982861_3983050_+	DNA-binding protein	Q5ZQZ9	Pseudomonas_phage	1.8e-17	69.4
AUM42108.1\|3983102_3983408_+	IclR family transcriptional regulator	Q5ZR02	Pseudomonas_phage	7.1e-24	59.0
AUM42109.1\|3983417_3984326_+	DUF3102 domain-containing protein	Q5ZR03	Pseudomonas_phage	3.4e-74	52.3
AUM42110.1\|3984329_3986099_+\|integrase	integrase	Q6QIE0	Burkholderia_phage	5.3e-228	68.0
AUM42111.1\|3986109_3987276_+	hypothetical protein	A4JWN1	Burkholderia_virus	2.2e-121	60.9
3986946:3986963	attR	NA	NA	NA	NA
AUM42112.1\|3987278_3987548_+	hypothetical protein	NA	NA	NA	NA
AUM42113.1\|3987565_3988177_+	sulfate transporter	A0A2D1GNM4	Pseudomonas_phage	9.4e-76	68.5
AUM42114.1\|3988256_3988445_+	hypothetical protein	NA	NA	NA	NA
AUM42115.1\|3988441_3988738_+	hypothetical protein	NA	NA	NA	NA
AUM42116.1\|3988724_3989219_+	hypothetical protein	Q5G8V2	Enterobacteria_phage	4.5e-12	38.2
AUM42117.1\|3989215_3989446_+	hypothetical protein	NA	NA	NA	NA
AUM42118.1\|3989435_3989651_+	hypothetical protein	NA	NA	NA	NA
AUM42119.1\|3990065_3990455_+	DNA-binding protein	Q6QIE8	Burkholderia_phage	3.8e-30	53.4

DBSCAN-SWA_12

4410593 : 4456598

Salmonella_phage(18.18%)

transposase,tRNA,tail,plate,head

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUM42490.1\|4410593_4411163_-\|tail	phage tail protein	A0A0M4RTP2	Salmonella_phage	1.2e-80	76.6
AUM42491.1\|4411176_4411986_-\|tail	phage tail protein	A0A0M4QWS3	Salmonella_phage	5.2e-114	82.9
AUM42492.1\|4411982_4412930_-\|tail	phage tail protein	A0A0M3ULH6	Salmonella_phage	8.1e-42	77.8
AUM42493.1\|4412933_4413503_-\|tail	phage tail protein	NA	NA	NA	NA
AUM42494.1\|4413499_4414564_-\|tail	phage tail protein	F6MIL6	Haemophilus_phage	4.3e-76	45.0
AUM42495.1\|4414564_4414915_-	hypothetical protein	A0A2H4JDR8	uncultured_Caudovirales_phage	2.4e-31	62.1
AUM43097.1\|4414968_4415622_-\|plate	phage baseplate protein	A0A0M3LPA3	Mannheimia_phage	8.0e-49	47.3
AUM42496.1\|4415621_4416857_-\|tail	phage tail protein	F6MIL3	Haemophilus_phage	6.3e-71	38.5
AUM42497.1\|4416840_4418259_-	hypothetical protein	NA	NA	NA	NA
AUM42498.1\|4418255_4420430_-	hypothetical protein	A0A0M3LPB6	Mannheimia_phage	4.5e-64	33.9
AUM42499.1\|4420581_4420971_-	hypothetical protein	NA	NA	NA	NA
AUM42500.1\|4420967_4421342_-\|tail	phage tail protein	A0A0M3LRV6	Mannheimia_phage	3.1e-29	55.4
AUM42501.1\|4421352_4422789_-\|tail	phage tail protein	B7SDP8	Haemophilus_phage	1.2e-102	46.6
AUM42502.1\|4422785_4423007_-	hypothetical protein	NA	NA	NA	NA
AUM42503.1\|4423003_4423660_-	hypothetical protein	NA	NA	NA	NA
AUM42504.1\|4423653_4424082_-	hypothetical protein	A0A1X9SGZ3	Bradyrhizobium_phage	2.0e-16	37.6
AUM42505.1\|4424093_4424492_-	hypothetical protein	NA	NA	NA	NA
AUM42506.1\|4424491_4425403_-\|head	head protein	A0A2H4J778	uncultured_Caudovirales_phage	1.7e-105	61.6
AUM42507.1\|4425413_4425812_-	hypothetical protein	NA	NA	NA	NA
AUM42508.1\|4425811_4426972_-	hypothetical protein	A0A0M5N0Q6	Ralstonia_phage	2.7e-63	42.9
AUM42509.1\|4427186_4427738_-	phage virion morphogenesis protein	A0A2H4J9E5	uncultured_Caudovirales_phage	8.3e-23	35.2
AUM42510.1\|4427737_4428910_-\|head	phage head morphogenesis protein	Q6QIB9	Burkholderia_phage	5.4e-64	48.9
AUM42511.1\|4428896_4430465_-	hypothetical protein	A0A125RNC0	Pseudomonas_phage	3.6e-119	44.9
AUM42512.1\|4430473_4432111_-	hypothetical protein	B7SDN0	Haemophilus_phage	9.9e-189	62.7
AUM43098.1\|4432902_4433202_+	hypothetical protein	A4JX50	Burkholderia_virus	1.1e-08	46.5
AUM42513.1\|4433208_4433463_-	hypothetical protein	NA	NA	NA	NA
AUM42514.1\|4433473_4433692_-	hypothetical protein	NA	NA	NA	NA
AUM42515.1\|4433678_4434179_-	DNA-binding protein	I6PBD1	Pseudomonas_phage	8.0e-41	51.2
AUM42516.1\|4434178_4434415_-	hypothetical protein	NA	NA	NA	NA
AUM42517.1\|4434392_4434950_-	hypothetical protein	NA	NA	NA	NA
AUM42518.1\|4434934_4435471_-	hypothetical protein	NA	NA	NA	NA
AUM42519.1\|4435467_4436220_-	DNA modification methylase	Q775B4	Bordetella_phage	3.0e-63	50.0
AUM42520.1\|4436216_4436414_-	hypothetical protein	NA	NA	NA	NA
AUM43099.1\|4436491_4436779_-	hypothetical protein	NA	NA	NA	NA
AUM42521.1\|4436792_4437260_-	mor transcription activator family protein	A0A2D1GNW5	Pseudomonas_phage	3.1e-18	36.4
AUM42522.1\|4437360_4437837_-	hypothetical protein	NA	NA	NA	NA
AUM43100.1\|4437833_4438247_-	GemA protein	A0A2D1GNN4	Pseudomonas_phage	3.1e-38	59.4
AUM43101.1\|4438470_4438767_-	hypothetical protein	C6ZR27	Salmonella_phage	2.1e-25	73.2
AUM42523.1\|4438828_4439020_-	hypothetical protein	A0A222YWL3	Escherichia_phage	1.2e-26	93.7
AUM43102.1\|4439571_4439820_-	hypothetical protein	T1S9K2	Salmonella_phage	4.1e-14	47.4
AUM42524.1\|4439843_4440068_-	hypothetical protein	NA	NA	NA	NA
AUM42525.1\|4440064_4440286_-	hypothetical protein	NA	NA	NA	NA
AUM42526.1\|4440285_4440999_-	hypothetical protein	NA	NA	NA	NA
AUM42527.1\|4440991_4441252_-	hypothetical protein	A0A2I7RUH3	Vibrio_phage	2.1e-08	47.5
AUM42528.1\|4441321_4441711_-	hypothetical protein	A0A1X9SG60	Bacillus_phage	2.6e-23	49.1
AUM43103.1\|4441964_4443185_-\|transposase	ISL3 family transposase	NA	NA	NA	NA
AUM42529.1\|4443285_4443519_-	hypothetical protein	NA	NA	NA	NA
AUM42530.1\|4443520_4444045_-	host-nuclease inhibitor protein Gam	C9DGL8	Escherichia_phage	3.2e-64	71.3
AUM42531.1\|4444060_4444249_-	hypothetical protein	NA	NA	NA	NA
AUM42532.1\|4444293_4444476_-	hypothetical protein	NA	NA	NA	NA
AUM42533.1\|4444489_4444696_-	hypothetical protein	NA	NA	NA	NA
AUM42534.1\|4444797_4444989_-	hypothetical protein	NA	NA	NA	NA
AUM42535.1\|4445086_4445311_-	hypothetical protein	NA	NA	NA	NA
AUM42536.1\|4445359_4446307_-	hypothetical protein	A0A2D1GNS0	Pseudomonas_phage	6.2e-50	37.8
AUM42537.1\|4446316_4448389_-\|transposase	transposase	A0A2D1GNK9	Pseudomonas_phage	3.7e-164	48.3
AUM43104.1\|4448375_4448573_-	DNA-binding protein	A0A0C4UQU0	Shigella_phage	1.7e-10	50.8
AUM42538.1\|4448833_4449415_+	hypothetical protein	NA	NA	NA	NA
AUM42539.1\|4450061_4451255_-	aromatic amino acid aminotransferase	NA	NA	NA	NA
AUM42540.1\|4451440_4452520_-	alanine racemase biosynthetic	A0A0P0YM39	Yellowstone_lake_mimivirus	1.2e-28	29.1
AUM42541.1\|4452551_4453967_-	replicative DNA helicase	A0A1B0VG30	Salmonella_phage	7.0e-199	78.4
AUM42542.1\|4454031_4455015_+	quinone oxidoreductase	NA	NA	NA	NA
AUM42543.1\|4455189_4455432_-	phage shock protein G	NA	NA	NA	NA
AUM42544.1\|4455599_4456598_-\|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	NA	NA	NA	NA

DBSCAN-SWA_13

4625523 : 4661266

Escherichia_phage(47.5%)

tail,portal,capsid,plate,integrase,terminase,holin,head,lysis

attL 4625366:4625412|attR 4656641:4656687

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
4625366:4625412	attL	NA	NA	NA	NA
AUM42682.1\|4625523_4625778_-	transcriptional regulator	M1SNR2	Escherichia_phage	1.3e-44	100.0
AUM42683.1\|4625823_4626987_-	hypothetical protein	U5N3V4	Enterobacteria_phage	7.0e-205	99.2
AUM42684.1\|4626986_4627466_-\|tail	phage tail protein	O64315	Escherichia_phage	1.5e-84	99.4
AUM42685.1\|4627480_4629928_-\|tail	phage tail tape measure protein	M1T2S3	Escherichia_phage	0.0e+00	97.1
AUM42686.1\|4629920_4630040_-\|tail	phage tail protein	A0A0F7LCR6	Escherichia_phage	1.0e-15	100.0
AUM42687.1\|4630072_4630348_-	hypothetical protein	A0A0F7LDQ8	Escherichia_phage	2.2e-40	98.9
AUM42688.1\|4630404_4630923_-\|tail	phage major tail tube protein	A0A0F7LDZ1	Escherichia_phage	1.4e-93	100.0
AUM42689.1\|4630935_4632126_-\|tail	phage tail protein	A0A0F7LBW9	Escherichia_phage	4.8e-225	99.5
AUM42690.1\|4632185_4632779_-	DNA-invertase	A0A0F7LA37	Escherichia_phage	1.3e-103	97.0
AUM42691.1\|4633138_4633564_+	hypothetical protein	A0A1C9II89	Salmonella_phage	2.9e-31	53.6
AUM42692.1\|4636125_4636737_-\|tail	phage tail protein I	A0A0F7LA36	Escherichia_phage	6.4e-117	99.5
AUM42693.1\|4636729_4637638_-\|plate	baseplate assembly protein	Q858V6	Yersinia_virus	8.8e-163	100.0
AUM42694.1\|4637642_4637990_-\|plate	baseplate assembly protein	A0A0F7L9X3	Escherichia_phage	1.7e-58	100.0
AUM42695.1\|4637986_4638622_-\|plate	baseplate assembly protein	U5N3F0	Enterobacteria_phage	9.0e-114	99.1
AUM42696.1\|4638688_4639141_-	phage virion morphogenesis protein	A0A0F7LBV9	Escherichia_phage	6.3e-77	100.0
AUM42697.1\|4639133_4639601_-\|tail	phage tail protein	A0A0F7LA33	Escherichia_phage	8.7e-82	98.7
AUM42698.1\|4639563_4639737_-\|lysis	phage lysis protein	Q7Y4E1	Escherichia_virus	2.3e-24	96.5
AUM42699.1\|4639708_4640134_-	protein lysB	U5N3W5	Enterobacteria_phage	4.7e-66	96.5
AUM42700.1\|4640121_4640547_-	protein lysA	A0A0F7LBP4	Escherichia_phage	3.6e-58	95.0
AUM42701.1\|4640561_4641059_-	lysozyme	A0A0F7LBS0	Escherichia_phage	3.1e-93	100.0
AUM42702.1\|4641058_4641340_-\|holin	holin	A0A0F7LDF8	Escherichia_phage	3.7e-43	100.0
AUM42703.1\|4641343_4641547_-\|tail	phage tail protein	U5N3E7	Enterobacteria_phage	4.0e-31	100.0
AUM42704.1\|4641546_4642056_-\|head	head completion/stabilization protein	U5N0S3	Enterobacteria_phage	1.1e-90	100.0
AUM42705.1\|4642155_4642899_-\|terminase	terminase	U5N091	Enterobacteria_phage	3.3e-123	97.2
AUM42706.1\|4642902_4643976_-\|capsid	phage major capsid protein, P2 family	Q94MD1	Enterobacteria_phage	5.1e-202	100.0
AUM42707.1\|4644034_4644889_-\|capsid	capsid scaffolding protein	Q94MI4	Enterobacteria_phage	9.0e-133	96.5
AUM42708.1\|4645062_4646835_+	oxidoreductase	A0A0F7LCK3	Escherichia_phage	0.0e+00	99.7
AUM42709.1\|4646834_4647869_+\|portal	phage portal protein	A0A0F7LDI7	Escherichia_phage	1.2e-200	99.7
AUM42710.1\|4648299_4650507_+	hypothetical protein	NA	NA	NA	NA
AUM42711.1\|4650737_4653026_-	replication protein A	Q858T4	Yersinia_virus	0.0e+00	97.0
AUM42712.1\|4653015_4653291_-	hypothetical protein	U5N3W1	Enterobacteria_phage	1.6e-43	97.8
AUM42713.1\|4653287_4653512_-	hypothetical protein	A0A0F7LDG9	Escherichia_phage	8.5e-35	97.3
AUM42714.1\|4653511_4653814_-	hypothetical protein	U5N0U2	Enterobacteria_phage	2.5e-45	97.0
AUM42715.1\|4653813_4654038_-	hypothetical protein	S4TP68	Salmonella_phage	2.3e-32	98.6
AUM42716.1\|4654101_4654602_-	replication protein B	A0A0F7LBQ6	Escherichia_phage	4.5e-92	100.0
AUM42717.1\|4654771_4655044_-	hypothetical protein	Q1JS36	Enterobacteria_phage	1.4e-47	100.0
AUM42718.1\|4655180_4655474_+	transcriptional regulator	Q1JS37	Enterobacteria_phage	2.7e-49	100.0
AUM42719.1\|4655543_4656524_+\|integrase	integrase	S4TP66	Salmonella_phage	4.7e-186	100.0
AUM42720.1\|4656709_4657210_-	stress adaptor protein CpxP	NA	NA	NA	NA
4656641:4656687	attR	NA	NA	NA	NA
AUM42721.1\|4657360_4658059_+	DNA-binding response regulator	Q6XM27	Feldmannia_irregularis_virus	5.3e-06	30.3
AUM42722.1\|4658055_4659429_+	two-component sensor histidine kinase	W8CYF6	Bacillus_phage	7.2e-15	25.6
AUM42723.1\|4659479_4659875_-	hypothetical protein	NA	NA	NA	NA
AUM42724.1\|4659886_4660576_-	MOSC domain-containing protein	NA	NA	NA	NA
AUM42725.1\|4660645_4661266_-	superoxide dismutase [Mn]	Q56AR7	Bacillus_thuringiensis_phage	2.4e-63	58.9

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. CP019190

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 123695

122

Escherichia_phage(30.43%)

integrase,transposase,tRNA

attL 8655:8670|attR 74844:74862

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUM43122.1\|582_1017_+	plasmid SOS inhibition protein B	NA	NA	NA	NA
AUM43123.1\|1013_1733_+	plasmid SOS inhibition protein A	NA	NA	NA	NA
AUM43124.1\|2006_2168_+	Hok/Gef family protein	NA	NA	NA	NA
AUM43125.1\|2422_3994_-\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	3.2e-168	58.7
AUM43126.1\|4013_4361_-\|transposase	transposase	A0A0P0ZDM8	Stx2-converting_phage	2.6e-46	76.6
AUM43127.1\|4360_5011_-\|transposase	transposase	A0A0P0ZCV4	Stx2-converting_phage	7.3e-18	44.4
AUM43128.1\|5576_5783_+	single-stranded DNA-binding protein	NA	NA	NA	NA
AUM43129.1\|5807_6095_+	hypothetical protein	NA	NA	NA	NA
AUM43130.1\|6138_7035_+	hypothetical protein	A0A2C9CYF8	Yersinia_phage	1.3e-44	38.4
AUM43131.1\|7330_7933_-	lytic transglycosylase	NA	NA	NA	NA
AUM43132.1\|8272_8659_+	conjugal transfer protein TraM	NA	NA	NA	NA
8655:8670	attL	NA	NA	NA	NA
AUM43133.1\|8850_9498_+	conjugal transfer protein TraJ	NA	NA	NA	NA
8655:8670	attL	NA	NA	NA	NA
AUM43134.1\|9630_9858_+	conjugal transfer protein TraY	NA	NA	NA	NA
AUM43135.1\|9891_10257_+	pilin	NA	NA	NA	NA
AUM43136.1\|10271_10583_+	type IV conjugative transfer system protein TraL	NA	NA	NA	NA
AUM43137.1\|10604_11171_+	type IV conjugative transfer system protein TraE	NA	NA	NA	NA
AUM43138.1\|11157_11886_+	type-F conjugative transfer system secretin TraK	NA	NA	NA	NA
AUM43139.1\|11885_13313_+	conjugal transfer protein TraB	NA	NA	NA	NA
AUM43140.1\|13302_13893_+	conjugal transfer protein TraP	NA	NA	NA	NA
AUM43141.1\|13831_14077_+	conjugal transfer protein TrbD	NA	NA	NA	NA
AUM43142.1\|14073_14589_+	type IV conjugative transfer system protein TraV	NA	NA	NA	NA
AUM43143.1\|14723_14945_+	conjugal transfer protein TraR	A2I309	Vibrio_virus	4.4e-07	40.8
AUM43144.1\|15104_17732_+	type IV secretion system protein TraC	NA	NA	NA	NA
AUM43145.1\|17728_18115_+	type-F conjugative transfer system protein TrbI	NA	NA	NA	NA
AUM43146.1\|18111_18744_+	protein TraW	NA	NA	NA	NA
AUM43147.1\|18740_19733_+	conjugal transfer protein TraU	NA	NA	NA	NA
AUM43292.1\|19854_20289_+	hypothetical protein	NA	NA	NA	NA
AUM43148.1\|21083_21461_+	hypothetical protein	NA	NA	NA	NA
AUM43149.1\|21634_21970_+	hypothetical protein	NA	NA	NA	NA
AUM43150.1\|22182_22821_+	type-F conjugative transfer system pilin assembly protein TrbC	NA	NA	NA	NA
AUM43151.1\|22817_24626_+	type-F conjugative transfer system mating-pair stabilization protein TraN	NA	NA	NA	NA
AUM43293.1\|24654_24912_+	conjugal transfer protein TrbE	NA	NA	NA	NA
AUM43152.1\|24904_25648_+	conjugal transfer protein TraF	NA	NA	NA	NA
AUM43153.1\|25772_26054_+	type-F conjugative transfer system pilin chaperone TraQ	NA	NA	NA	NA
AUM43154.1\|26040_26586_+	type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB	NA	NA	NA	NA
AUM43155.1\|26515_26857_+	conjugal transfer protein TrbJ	NA	NA	NA	NA
AUM43156.1\|26810_27236_+	conjugal transfer protein TrbF	NA	NA	NA	NA
AUM43157.1\|27222_28596_+	conjugal transfer protein TraH	NA	NA	NA	NA
AUM43158.1\|31437_31935_+	surface exclusion protein	NA	NA	NA	NA
AUM43294.1\|31966_32698_+	TraT complement resistance protein	NA	NA	NA	NA
AUM43159.1\|32950_35104_+	type IV conjugative transfer system coupling protein TraD	NA	NA	NA	NA
AUM43160.1\|35112_35511_-	VapC toxin family PIN domain ribonuclease	NA	NA	NA	NA
AUM43161.1\|35510_35738_-	antitoxin	NA	NA	NA	NA
AUM43162.1\|35819_41090_+	conjugative transfer relaxase/helicase TraI	NA	NA	NA	NA
AUM43163.1\|41109_41856_+	conjugal transfer pilus acetylase TraX	A0A077JBM8	Xanthomonas_phage	6.6e-07	27.6
AUM43164.1\|41910_42471_+	conjugal transfer protein	NA	NA	NA	NA
AUM43165.1\|42912_43959_-\|integrase	integrase	NA	NA	NA	NA
AUM43295.1\|44022_44172_+	Hok/Gef family protein	NA	NA	NA	NA
AUM43297.1\|44441_44720_+	replication protein	NA	NA	NA	NA
AUM43166.1\|44649_44910_-	hypothetical protein	NA	NA	NA	NA
AUM43296.1\|44939_45017_+	RepA leader peptide Tap	NA	NA	NA	NA
AUM43167.1\|45009_45876_+	replication initiation protein	NA	NA	NA	NA
AUM43168.1\|47148_47412_+	plasmid stabilization protein	NA	NA	NA	NA
AUM43169.1\|47401_47701_+	addiction module toxin RelE	NA	NA	NA	NA
AUM43170.1\|48166_48451_+	CopG family transcriptional regulator	NA	NA	NA	NA
AUM43171.1\|48450_48726_+	plasmid stabilization protein	NA	NA	NA	NA
AUM43298.1\|48768_49038_-	arylsulfatase regulator	NA	NA	NA	NA
AUM43172.1\|49677_50109_-	resolvase	E5FFF9	Burkholderia_phage	7.7e-16	36.8
AUM43173.1\|50178_50769_+	hypothetical protein	NA	NA	NA	NA
AUM43174.1\|51091_54082_-\|transposase	DDE transposase	Q1MVP5	Enterobacteria_phage	2.0e-248	45.7
AUM43175.1\|54111_54735_-	resolvase	NA	NA	NA	NA
AUM43176.1\|54869_55355_+	resolvase	M4QQC6	Vibrio_phage	9.6e-15	39.6
AUM43177.1\|55391_56795_+\|transposase	ISKra4 family transposase	NA	NA	NA	NA
56042:56057	attR	NA	NA	NA	NA
AUM43178.1\|56919_57423_+	hypothetical protein	NA	NA	NA	NA
56042:56057	attR	NA	NA	NA	NA
AUM43179.1\|57552_58215_+	hypothetical protein	NA	NA	NA	NA
AUM43299.1\|58499_59063_+\|integrase	integrase	A0A2L1IV36	Escherichia_phage	1.3e-47	49.5
AUM43180.1\|60854_61550_+	aquaporin	NA	NA	NA	NA
AUM43181.1\|61711_62050_-	hypothetical protein	NA	NA	NA	NA
AUM43182.1\|62213_62705_+	hypothetical protein	NA	NA	NA	NA
AUM43183.1\|62785_63034_+	hypothetical protein	NA	NA	NA	NA
AUM43184.1\|63023_63446_+	hypothetical protein	NA	NA	NA	NA
AUM43185.1\|63593_64142_+\|integrase	integrase	A0A2L1IV36	Escherichia_phage	1.2e-50	52.2
AUM43186.1\|64122_65004_-	hypothetical protein	NA	NA	NA	NA
AUM43187.1\|65066_66368_-	carboxypeptidase	NA	NA	NA	NA
AUM43300.1\|66578_67670_-	hydrolase	NA	NA	NA	NA
AUM43188.1\|71909_73106_-\|transposase	IS110 family transposase	NA	NA	NA	NA
AUM43189.1\|73427_73697_+	prevent-host-death family protein	NA	NA	NA	NA
AUM43190.1\|73699_73993_+	plasmid stabilization protein	NA	NA	NA	NA
AUM43191.1\|74986_76498_-\|tRNA	lysine--tRNA ligase	A0A1V0SAC0	Catovirus	4.8e-89	37.1
AUM43301.1\|76725_78024_+	putrescine-ornithine antiporter	NA	NA	NA	NA
AUM43192.1\|78051_80187_+	lysine decarboxylase LdcC	NA	NA	NA	NA
AUM43193.1\|81354_81990_+	hypothetical protein	A0A2L1IV36	Escherichia_phage	1.6e-65	58.0
AUM43194.1\|82331_82868_+	hypothetical protein	NA	NA	NA	NA
AUM43195.1\|82940_83459_+	hypothetical protein	NA	NA	NA	NA
AUM43196.1\|83602_84295_+	hypothetical protein	NA	NA	NA	NA
AUM43197.1\|84800_85319_+	hypothetical protein	NA	NA	NA	NA
AUM43302.1\|85754_88316_+	hypothetical protein	NA	NA	NA	NA
AUM43198.1\|88423_89521_+	hypothetical protein	NA	NA	NA	NA
AUM43199.1\|89520_90156_+	hypothetical protein	NA	NA	NA	NA
AUM43200.1\|90155_90638_+	hypothetical protein	NA	NA	NA	NA
AUM43201.1\|90648_91482_+	hypothetical protein	NA	NA	NA	NA
AUM43202.1\|91542_92817_+	hypothetical protein	NA	NA	NA	NA
AUM43203.1\|92838_93351_+	hypothetical protein	NA	NA	NA	NA
AUM43204.1\|93347_93962_+	hypothetical protein	A0A2L1IV08	Escherichia_phage	5.1e-29	34.5
AUM43205.1\|93978_94476_+	hypothetical protein	NA	NA	NA	NA
AUM43206.1\|94692_95046_+	hypothetical protein	NA	NA	NA	NA
AUM43207.1\|95186_95378_+	hypothetical protein	NA	NA	NA	NA
AUM43208.1\|95418_95655_+	antitoxin	NA	NA	NA	NA
AUM43209.1\|95657_95972_+	plasmid maintenance protein CcdB	NA	NA	NA	NA
AUM43210.1\|96308_96968_+	hypothetical protein	A0A2L1IV36	Escherichia_phage	6.2e-57	55.9
AUM43211.1\|97292_97766_+	hypothetical protein	NA	NA	NA	NA
AUM43212.1\|97762_98392_+	hypothetical protein	A0A2L1IV08	Escherichia_phage	7.8e-25	33.0
AUM43213.1\|98375_98600_+	hypothetical protein	NA	NA	NA	NA
AUM43214.1\|98727_104349_+	hypothetical protein	NA	NA	NA	NA
AUM43215.1\|104250_104943_-	hypothetical protein	H7BWD2	unidentified_phage	1.9e-08	27.7
AUM43216.1\|106117_106408_-	addiction module toxin RelE	A0A2H4JBF4	uncultured_Caudovirales_phage	3.0e-24	62.1
AUM43217.1\|106397_106649_-	bifunctional antitoxin/transcriptional repressor RelB	NA	NA	NA	NA
AUM43218.1\|106886_107186_+	hypothetical protein	NA	NA	NA	NA
AUM43219.1\|107405_108425_-\|transposase	IS110 family transposase	NA	NA	NA	NA
AUM43220.1\|108572_109178_+	hypothetical protein	H7BWD2	unidentified_phage	3.5e-06	30.3
AUM43221.1\|109040_114674_-	hypothetical protein	NA	NA	NA	NA
AUM43222.1\|114766_115261_-	hypothetical protein	NA	NA	NA	NA
AUM43223.1\|115585_116245_-	hypothetical protein	A0A2L1IV36	Escherichia_phage	6.2e-57	55.9
AUM43224.1\|118306_119320_+	hypothetical protein	NA	NA	NA	NA
AUM43225.1\|119381_119648_+\|transposase	transposase	NA	NA	NA	NA
AUM43303.1\|119644_119881_-	hypothetical protein	NA	NA	NA	NA
AUM43226.1\|119794_120493_+\|transposase	transposase	S5WIU1	Leptospira_phage	9.2e-43	40.7
AUM43227.1\|120483_121338_+\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	3.3e-50	49.7
AUM43228.1\|121978_122236_+	antitoxin	NA	NA	NA	NA
AUM43229.1\|122237_122570_+	mRNA interferase PemK	NA	NA	NA	NA
AUM43230.1\|123159_123411_+	antitoxin	NA	NA	NA	NA
AUM43231.1\|123407_123695_+	addiction module toxin RelE	A0A2H4JBF4	uncultured_Caudovirales_phage	1.3e-19	47.4

DBSCAN-SWA_2

127248 : 127545

Stx2-converting_phage(100.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUM43237.1\|127248_127545_+\|transposase	transposase	A0A0P0ZBY2	Stx2-converting_phage	9.3e-29	61.2

DBSCAN-SWA_3

134295 : 137525

Stx2-converting_phage(66.67%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUM43242.1\|134295_135867_-\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	3.2e-168	58.7
AUM43243.1\|135886_136234_-\|transposase	transposase	A0A0P0ZDM8	Stx2-converting_phage	2.6e-46	76.6
AUM43244.1\|136916_137525_+	hypothetical protein	H7BWD2	unidentified_phage	2.7e-06	29.9

DBSCAN-SWA_4

143384 : 148430

Escherichia_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUM43247.1\|143384_144014_-	hypothetical protein	A0A2L1IV08	Escherichia_phage	7.8e-25	33.0
AUM43248.1\|144010_144484_-	hypothetical protein	NA	NA	NA	NA
AUM43249.1\|144808_145468_-	hypothetical protein	A0A2L1IV36	Escherichia_phage	6.2e-57	55.9
AUM43250.1\|145805_146120_-	plasmid maintenance protein CcdB	NA	NA	NA	NA
AUM43251.1\|146122_146359_-	antitoxin	NA	NA	NA	NA
AUM43252.1\|146399_146591_-	hypothetical protein	NA	NA	NA	NA
AUM43253.1\|146731_147085_-	hypothetical protein	NA	NA	NA	NA
AUM43254.1\|147301_147799_-	hypothetical protein	NA	NA	NA	NA
AUM43255.1\|147815_148430_-	hypothetical protein	A0A2L1IV08	Escherichia_phage	5.1e-29	34.5

DBSCAN-SWA_5

159765 : 160422

Escherichia_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUM43266.1\|159765_160422_-	pilus assembly protein	A0A2L1IV36	Escherichia_phage	1.2e-65	58.0

DBSCAN-SWA_6

165089 : 177746

Macacine_betaherpesvirus(12.5%)

integrase

attL 166695:166733|attR 170055:170093

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUM43274.1\|165089_165872_+	resolvase	I3WFA4	Macacine_betaherpesvirus	3.9e-50	88.4
166695:166733	attL	NA	NA	NA	NA
AUM43306.1\|167021_168107_+	hypothetical protein	NA	NA	NA	NA
AUM43275.1\|168100_169015_+	hypothetical protein	S5MBZ0	Brevibacillus_phage	1.1e-06	27.4
AUM43276.1\|169011_170013_+\|integrase	integrase	A0A2D2W391	Mycobacterium_phage	5.0e-10	26.2
AUM43277.1\|170888_172094_+	chromosome partitioning protein ParA	A0A077SL49	Escherichia_phage	4.9e-161	68.8
170055:170093	attR	NA	NA	NA	NA
AUM43278.1\|172093_173068_+	chromosome partitioning protein ParB	A0A1B0V750	Salmonella_phage	1.9e-86	54.1
AUM43279.1\|173149_174412_-	DNA polymerase V subunit UmuC	F1C5A5	Cronobacter_phage	6.1e-154	63.5
AUM43280.1\|174411_174834_-	protein samA'	A0A1W6JNS2	Morganella_phage	1.8e-30	54.8
AUM43307.1\|176734_176917_+	hypothetical protein	NA	NA	NA	NA
AUM43281.1\|177062_177746_+	DNA methylase	A0A2I7RE86	Vibrio_phage	4.9e-25	35.0

DBSCAN-SWA_7

184124 : 184664

Xanthomonas_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUM43290.1\|184124_184664_+	single-stranded DNA-binding protein	I3PGW4	Xanthomonas_phage	5.2e-46	74.8

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP019189

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. CP019190

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection