CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Prophage number
CP030355	Novosphingobium sp. P6W plasmid pP6W2, complete sequence	0 crisprs	NA	12
CP030354	Novosphingobium sp. P6W plasmid pP6W1, complete sequence	0 crisprs	RT,csa3	42
CP030352	Novosphingobium sp. P6W chromosome 1, complete sequence	2 crisprs	DinG,csa3,RT	2
CP030353	Novosphingobium sp. P6W chromosome 2, complete sequence	0 crisprs	RT,csa3	4

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 15024

Hokovirus(100.0%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXB80606.1\|796_976_-	hypothetical protein	NA	NA	NA	NA
AXB80607.1\|1578_1974_-	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA
AXB80608.1\|1973_2219_-	transcription factor	NA	NA	NA	NA
AXB80609.1\|2385_2577_-	hypothetical protein	NA	NA	NA	NA
AXB80610.1\|4328_5504_-	diguanylate cyclase	NA	NA	NA	NA
AXB80611.1\|6278_7859_-	cyclic diguanylate phosphodiesterase	NA	NA	NA	NA
AXB80612.1\|9673_9973_-	DUF1153 domain-containing protein	NA	NA	NA	NA
AXB80613.1\|10608_10854_-	LuxR family transcriptional regulator	NA	NA	NA	NA
AXB80614.1\|11216_11489_+	hypothetical protein	NA	NA	NA	NA
AXB80739.1\|11836_12199_-	thermonuclease family protein	NA	NA	NA	NA
AXB80740.1\|12308_12617_+	hypothetical protein	NA	NA	NA	NA
AXB80615.1\|13273_13480_-	hypothetical protein	NA	NA	NA	NA
AXB80616.1\|14013_15024_+	UDP-glucose 4-epimerase GalE	A0A1V0SG19	Hokovirus	1.2e-35	31.4

DBSCAN-SWA_2

27949 : 36918

Moumouvirus(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXB80628.1\|27949_28717_+	HAD-IIB family hydrolase	A0A2P1EM96	Moumouvirus	4.7e-08	25.5
AXB80629.1\|28878_29181_-	addiction module antidote protein, HigA family	NA	NA	NA	NA
AXB80630.1\|29443_29689_-	hypothetical protein	NA	NA	NA	NA
AXB80631.1\|29685_29991_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
AXB80632.1\|29890_30793_-	DUF1738 domain-containing protein	A0A1V0EBY3	Caulobacter_phage	2.5e-48	42.2
AXB80741.1\|31227_31746_-	hypothetical protein	NA	NA	NA	NA
AXB80633.1\|32216_32783_-	ADP-ribose pyrophosphatase	NA	NA	NA	NA
AXB80634.1\|32996_33503_+	transcriptional regulator	A0A1P8VVG0	Erythrobacter_phage	1.3e-27	52.7
AXB80742.1\|33858_34155_-	WGR domain-containing protein	NA	NA	NA	NA
AXB80635.1\|34510_35821_+	sugar transferase	NA	NA	NA	NA
AXB80636.1\|35890_36238_-	hypothetical protein	NA	NA	NA	NA
AXB80637.1\|36234_36918_-	chromosome partitioning protein	A0A0A8IL09	Aurantimonas_phage	8.4e-41	41.7

DBSCAN-SWA_3

43759 : 50760

Synechococcus_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXB80640.1\|43759_44887_+	GDP-mannose 4,6-dehydratase	M4QRT5	Synechococcus_phage	2.2e-134	66.9
AXB80641.1\|45132_46083_+	GDP-L-fucose synthase	M4R1H4	Synechococcus_phage	2.2e-95	54.3
AXB80642.1\|46082_47336_+	colanic acid biosynthesis glycosyltransferase WcaI	NA	NA	NA	NA
AXB80643.1\|48208_48451_-	hypothetical protein	NA	NA	NA	NA
AXB80644.1\|48693_50760_+	serine recombinase	I3VYZ3	Thermoanaerobacterium_phage	4.7e-10	23.9

DBSCAN-SWA_4

55542 : 60439

Streptococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXB80649.1\|55542_57741_+	capsular exopolysaccharide family protein	A0A1X9I5D6	Streptococcus_phage	3.8e-18	30.0
AXB80650.1\|59680_60439_-	hypothetical protein	A0A0P0ZEB3	Stx2-converting_phage	3.3e-06	32.2

DBSCAN-SWA_5

67088 : 68255

Paramecium_bursaria_Chlorella_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXB80655.1\|67088_68255_+	nucleotide sugar dehydrogenase	O41091	Paramecium_bursaria_Chlorella_virus	4.2e-109	54.3

DBSCAN-SWA_6

77763 : 78991

Burkholderia_virus(100.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXB80664.1\|77763_78991_+\|transposase	IS3 family transposase	Q8W6R2	Burkholderia_virus	1.3e-103	68.4

DBSCAN-SWA_7

86161 : 89342

Acanthocystis_turfacea_Chlorella_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXB80669.1\|86161_86920_+	ABC transporter ATP-binding protein	M1HHI6	Acanthocystis_turfacea_Chlorella_virus	1.4e-07	25.6
AXB80670.1\|86953_88441_+	hypothetical protein	NA	NA	NA	NA
AXB80671.1\|88502_89342_-	3-deoxy-8-phosphooctulonate synthase	E3T537	Cafeteria_roenbergensis_virus	3.0e-48	42.2

DBSCAN-SWA_8

96334 : 103098

Tetraselmis_virus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXB80676.1\|96334_97045_+	glycosyltransferase	A0A2P0VNH9	Tetraselmis_virus	5.5e-51	41.3
AXB80677.1\|97265_98684_-	hypothetical protein	NA	NA	NA	NA
AXB80744.1\|98767_99415_-	hypothetical protein	A0A0P0YLT6	Yellowstone_lake_mimivirus	9.8e-15	44.6
AXB80678.1\|99549_101121_-	glycosyltransferase	NA	NA	NA	NA
AXB80745.1\|101251_102061_-	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA
AXB80679.1\|102093_103098_-	KpsF/GutQ family sugar-phosphate isomerase	A0A0B5A2A5	Yersinia_phage	1.9e-20	38.9

DBSCAN-SWA_9

120330 : 130072

Bacillus_virus(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXB80692.1\|120330_123966_-	hypothetical protein	A8C6A2	Antheraea_pernyi_nuclear_polyhedrosis_virus	7.4e-43	29.6
AXB80693.1\|123983_125516_-	cell filamentation protein Fic	NA	NA	NA	NA
AXB80694.1\|125741_127211_-	GGDEF domain-containing protein	G3MA91	Bacillus_virus	5.0e-14	32.7
AXB80695.1\|127315_130072_-	GGDEF domain-containing protein	G3MA91	Bacillus_virus	1.2e-13	31.8

DBSCAN-SWA_10

154185 : 154467

Pseudomonas_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXB80713.1\|154185_154467_-	XRE family transcriptional regulator	A0A2D1GR59	Pseudomonas_phage	2.7e-17	55.3

DBSCAN-SWA_11

162191 : 162788

Burkholderia_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXB80721.1\|162191_162788_-	recombinase family protein	E5FFF9	Burkholderia_phage	7.3e-41	48.3

DBSCAN-SWA_12

182383 : 182743

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXB80735.1\|182383_182743_+	integration host factor subunit alpha	A0A1P8CWT5	Bacillus_phage	8.1e-11	37.1

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. CP030354

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 12802

Synechococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXB80032.1\|2923_3607_+	hypothetical protein	NA	NA	NA	NA
AXB80033.1\|3888_4083_+	hypothetical protein	NA	NA	NA	NA
AXB80034.1\|5590_5968_+	hypothetical protein	NA	NA	NA	NA
AXB80035.1\|6041_6959_+	iron-containing redox enzyme family protein	NA	NA	NA	NA
AXB80036.1\|7326_8466_-	glycosidase	NA	NA	NA	NA
AXB80037.1\|8462_9221_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
AXB80557.1\|9217_11434_-	hypothetical protein	NA	NA	NA	NA
AXB80038.1\|11822_12044_+	hypothetical protein	NA	NA	NA	NA
AXB80039.1\|12325_12802_+	heat-shock protein	A0A0E3FZV9	Synechococcus_phage	3.6e-22	37.5

DBSCAN-SWA_2

25809 : 28032

Tupanvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXB80052.1\|25809_28032_-	catalase	A0A2K9L0T1	Tupanvirus	4.9e-138	49.0

DBSCAN-SWA_3

37086 : 41660

Salmonella_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXB80061.1\|37086_38181_+	DNA polymerase IV	I6RSM4	Salmonella_phage	1.8e-16	32.3
AXB80062.1\|38180_38753_+	alpha-ketoglutarate-dependent dioxygenase AlkB	NA	NA	NA	NA
AXB80063.1\|38829_39720_-	histone deacetylase	A0A2K9L0I3	Tupanvirus	7.9e-15	31.5
AXB80064.1\|39773_41660_-	molecular chaperone HtpG	A0A1B1ISV4	uncultured_Mediterranean_phage	1.1e-93	33.9

DBSCAN-SWA_4

47511 : 54206

Orpheovirus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXB80067.1\|47511_48144_+	hypothetical protein	A0A2I2L3Z7	Orpheovirus	4.7e-14	33.8
AXB80068.1\|49861_50194_-	ATP-binding protein	NA	NA	NA	NA
AXB80069.1\|50705_51653_+	alpha/beta hydrolase	A0A088FS12	Mycobacterium_phage	1.1e-09	39.8
AXB80070.1\|51732_52737_+	DUF1838 domain-containing protein	NA	NA	NA	NA
AXB80071.1\|53231_54206_-	transcriptional regulator	A0A1P8VVG0	Erythrobacter_phage	9.5e-22	46.0

DBSCAN-SWA_5

62911 : 172024

Tetraselmis_virus(15.0%)

integrase,transposase,protease

attL 154536:154554|attR 174262:174280

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXB80080.1\|62911_63858_-\|transposase	IS630 family transposase	A0A2P0VP61	Tetraselmis_virus	1.5e-11	24.7
AXB80081.1\|65727_66291_-	hypothetical protein	NA	NA	NA	NA
AXB80082.1\|66077_66497_-	hypothetical protein	A0A1B0YZU7	Pseudomonas_phage	5.9e-05	50.0
AXB80083.1\|66736_69169_-	PAS domain S-box protein	A0A1V0SGX0	Hokovirus	5.0e-11	20.3
AXB80084.1\|70374_70605_-	hypothetical protein	NA	NA	NA	NA
AXB80085.1\|70773_72267_+\|transposase	IS21 family transposase	A0A2L1IVA1	Escherichia_phage	1.7e-14	26.6
AXB80086.1\|72263_73031_+	ATP-binding protein	A0A059NT77	Lactococcus_phage	4.5e-43	39.7
AXB80087.1\|73160_73562_-	hypothetical protein	NA	NA	NA	NA
AXB80560.1\|73818_74055_-	hypothetical protein	NA	NA	NA	NA
AXB80088.1\|74772_74964_+	DUF465 domain-containing protein	NA	NA	NA	NA
AXB80089.1\|75660_75852_-	hypothetical protein	NA	NA	NA	NA
AXB80090.1\|76261_76975_-	hypothetical protein	NA	NA	NA	NA
AXB80091.1\|77733_78843_+\|transposase	IS630 family transposase	NA	NA	NA	NA
AXB80092.1\|79129_80300_+\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	2.4e-35	37.6
AXB80093.1\|80810_81209_+	hypothetical protein	NA	NA	NA	NA
AXB80094.1\|81308_81659_-	hypothetical protein	NA	NA	NA	NA
AXB80095.1\|83188_84134_+\|transposase	IS630 family transposase	A0A2P0VP61	Tetraselmis_virus	1.5e-11	24.7
AXB80096.1\|84482_84857_+	hypothetical protein	NA	NA	NA	NA
AXB80097.1\|85239_86031_+	hypothetical protein	NA	NA	NA	NA
AXB80098.1\|86058_86295_+	XRE family transcriptional regulator	NA	NA	NA	NA
AXB80099.1\|86418_86883_+	hypothetical protein	NA	NA	NA	NA
AXB80561.1\|86929_87124_-	hypothetical protein	NA	NA	NA	NA
AXB80100.1\|87303_87720_-	hypothetical protein	NA	NA	NA	NA
AXB80101.1\|87857_88394_-	hypothetical protein	NA	NA	NA	NA
AXB80102.1\|88470_88923_-	hypothetical protein	NA	NA	NA	NA
AXB80103.1\|89095_89806_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
AXB80104.1\|89831_90134_-	hypothetical protein	NA	NA	NA	NA
AXB80105.1\|90225_90492_-	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA
AXB80106.1\|90583_90949_-	DUF3768 domain-containing protein	NA	NA	NA	NA
AXB80107.1\|91106_91658_-	hypothetical protein	NA	NA	NA	NA
AXB80108.1\|92039_93155_-\|transposase	IS110 family transposase	NA	NA	NA	NA
AXB80109.1\|94872_95415_-	hypothetical protein	NA	NA	NA	NA
AXB80110.1\|97336_97873_-	hypothetical protein	NA	NA	NA	NA
AXB80111.1\|98046_98364_-	integration host factor subunit alpha	Q2A099	Sodalis_phage	3.0e-09	37.1
AXB80112.1\|98415_99012_-	hypothetical protein	NA	NA	NA	NA
AXB80113.1\|99259_100171_+	XRE family transcriptional regulator	NA	NA	NA	NA
AXB80114.1\|100962_101409_+	DUF736 domain-containing protein	NA	NA	NA	NA
AXB80115.1\|101481_102627_+	DUF2493 domain-containing protein	A0A0D4DBJ6	Vibrio_phage	1.1e-05	28.6
AXB80116.1\|102752_103184_-	hypothetical protein	NA	NA	NA	NA
AXB80117.1\|103190_103772_+	hypothetical protein	NA	NA	NA	NA
AXB80118.1\|104184_104403_-	hypothetical protein	NA	NA	NA	NA
AXB80119.1\|104944_105235_+	hypothetical protein	NA	NA	NA	NA
AXB80120.1\|105224_107582_+	conjugal transfer protein TraD	NA	NA	NA	NA
AXB80121.1\|107584_110842_+	conjugative relaxase	NA	NA	NA	NA
AXB80562.1\|110919_111552_-	DUF159 family protein	A0A291AUP1	Sinorhizobium_phage	4.7e-14	33.5
AXB80563.1\|111755_112067_+	hypothetical protein	NA	NA	NA	NA
AXB80122.1\|112782_113058_-	HU family DNA-binding protein	B5TA87	Burkholderia_phage	1.2e-11	46.7
AXB80123.1\|113277_113532_+	hypothetical protein	NA	NA	NA	NA
AXB80124.1\|113627_113822_+	hypothetical protein	NA	NA	NA	NA
AXB80125.1\|114033_114342_+	DNA polymerase III subunit alpha	NA	NA	NA	NA
AXB80126.1\|114741_115688_-\|transposase	IS630 family transposase	A0A2P0VP61	Tetraselmis_virus	1.5e-11	24.7
AXB80127.1\|116209_118468_-	glycosyl hydrolase	NA	NA	NA	NA
AXB80128.1\|118451_119249_-	hypothetical protein	NA	NA	NA	NA
AXB80129.1\|119561_122477_+	TonB-dependent receptor	A0A0P0I887	Acinetobacter_phage	5.0e-42	25.4
AXB80130.1\|122608_123916_+	MFS transporter	NA	NA	NA	NA
AXB80131.1\|123908_125327_+	FAD-binding oxidoreductase	NA	NA	NA	NA
AXB80132.1\|125323_125848_+	hypothetical protein	NA	NA	NA	NA
AXB80133.1\|125844_126951_+	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA
AXB80134.1\|126950_127841_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
AXB80135.1\|127613_128264_-	hypothetical protein	NA	NA	NA	NA
AXB80136.1\|128335_128611_-	hypothetical protein	NA	NA	NA	NA
AXB80137.1\|128637_129309_-	hypothetical protein	NA	NA	NA	NA
AXB80138.1\|129375_130344_-	sugar phosphate isomerase/epimerase	NA	NA	NA	NA
AXB80139.1\|130571_131267_+	GntR family transcriptional regulator	NA	NA	NA	NA
AXB80140.1\|131305_133522_-	hypothetical protein	NA	NA	NA	NA
AXB80141.1\|133630_136405_-	TonB-dependent receptor	A0A0P0I887	Acinetobacter_phage	1.4e-17	40.8
AXB80142.1\|137150_138644_+\|transposase	IS21 family transposase	A0A2L1IVA1	Escherichia_phage	1.7e-14	26.6
AXB80143.1\|138640_139408_+	ATP-binding protein	A0A059NT77	Lactococcus_phage	4.5e-43	39.7
AXB80144.1\|139727_140384_+	plasmid pRiA4b ORF-3 family protein	NA	NA	NA	NA
AXB80145.1\|140544_141732_+\|transposase	ISKra4 family transposase	NA	NA	NA	NA
AXB80146.1\|141620_142301_+	hypothetical protein	NA	NA	NA	NA
AXB80147.1\|142230_144003_+	hypothetical protein	NA	NA	NA	NA
AXB80148.1\|144070_145648_-	carboxylesterase/lipase family protein	M1PNU1	Moumouvirus	2.5e-19	31.1
AXB80149.1\|146249_147842_+	tannase/feruloyl esterase family alpha/beta hydrolase	NA	NA	NA	NA
AXB80150.1\|147918_149811_+	alpha-galactosidase	NA	NA	NA	NA
AXB80151.1\|150756_151593_+	hypothetical protein	NA	NA	NA	NA
AXB80152.1\|151722_153402_+	TonB-dependent receptor	NA	NA	NA	NA
154536:154554	attL	NA	NA	NA	NA
AXB80564.1\|155995_157510_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	4.0e-43	28.9
AXB80153.1\|161839_163183_-	HAMP domain-containing protein	NA	NA	NA	NA
AXB80565.1\|163175_163850_-	DNA-binding response regulator	W8CYM9	Bacillus_phage	3.0e-30	33.8
AXB80154.1\|164062_165463_+	hydrolase	NA	NA	NA	NA
AXB80155.1\|165589_166411_+	undecaprenyl-diphosphate phosphatase	NA	NA	NA	NA
AXB80156.1\|166618_167311_+	DedA family protein	NA	NA	NA	NA
AXB80157.1\|167325_168879_+	CBS domain-containing protein	A0A0R6PEZ3	Moraxella_phage	6.2e-39	42.4
AXB80566.1\|168909_170136_-\|integrase	integrase	NA	NA	NA	NA
AXB80158.1\|170368_172024_+\|integrase	integrase	NA	NA	NA	NA
174262:174280	attR	NA	NA	NA	NA

DBSCAN-SWA_6

176021 : 177192

Leptospira_phage(100.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXB80164.1\|176021_177192_+\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	2.4e-35	37.6

DBSCAN-SWA_7

181425 : 185798

Aeromonas_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXB80167.1\|181425_182622_-	replication protein A	A0A1I9KF58	Aeromonas_phage	1.9e-35	28.5
AXB80168.1\|184318_184819_-	hypothetical protein	NA	NA	NA	NA
AXB80169.1\|184952_185798_-	AAA family ATPase	A0A059NT77	Lactococcus_phage	4.8e-30	36.5

DBSCAN-SWA_8

189039 : 191526

Ectocarpus_siliculosus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXB80173.1\|189039_191526_-	PAS domain S-box protein	Q8QKV7	Ectocarpus_siliculosus_virus	3.4e-07	31.2

DBSCAN-SWA_9

215856 : 217389

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXB80196.1\|215856_217389_-	hypothetical protein	A0A2H4PQM9	Staphylococcus_phage	5.9e-34	26.7

DBSCAN-SWA_10

229337 : 233930

Pithovirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXB80205.1\|229337_230105_-	ABC transporter ATP-binding protein	W5SAS9	Pithovirus	4.1e-12	29.9
AXB80206.1\|230101_231085_-	iron ABC transporter permease	NA	NA	NA	NA
AXB80207.1\|231081_231975_-	hypothetical protein	NA	NA	NA	NA
AXB80208.1\|231974_233930_-	TonB-dependent receptor	A0A0P0I887	Acinetobacter_phage	1.8e-11	34.1

DBSCAN-SWA_11

253840 : 256381

Acinetobacter_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXB80221.1\|253840_256381_+	TonB-dependent receptor	A0A0P0I887	Acinetobacter_phage	7.8e-15	34.3

DBSCAN-SWA_12

261381 : 262014

Erythrobacter_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXB80225.1\|261381_262014_+	transcriptional regulator	A0A1P8VVG0	Erythrobacter_phage	1.1e-26	51.6

DBSCAN-SWA_13

265858 : 266884

Caulobacter_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXB80230.1\|265858_266884_+	DUF1738 domain-containing protein	A0A1V0EEV1	Caulobacter_phage	4.8e-56	40.3

DBSCAN-SWA_14

277725 : 286892

Staphylococcus_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXB80239.1\|277725_278001_-	HU family DNA-binding protein	Q2A099	Sodalis_phage	1.5e-12	43.7
AXB80240.1\|279330_280251_+	hypothetical protein	NA	NA	NA	NA
AXB80241.1\|280474_282415_+	acetate--CoA ligase	A0A2H4PQU7	Staphylococcus_phage	5.1e-83	39.5
AXB80242.1\|282930_283992_-	phosphotransferase family protein	NA	NA	NA	NA
AXB80243.1\|283988_285173_-	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA
AXB80244.1\|285308_286892_+	long-chain fatty acid--CoA ligase	A0A2H4PQM9	Staphylococcus_phage	5.3e-30	26.0

DBSCAN-SWA_15

302266 : 303022

Trichoplusia_ni_ascovirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXB80256.1\|302266_303022_+	SDR family NAD(P)-dependent oxidoreductase	Q06VL0	Trichoplusia_ni_ascovirus	4.6e-16	31.0

DBSCAN-SWA_16

311666 : 316486

Lactobacillus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXB80265.1\|311666_313121_+	FAD-dependent oxidoreductase	A0A2P0ZL82	Lactobacillus_phage	3.2e-21	25.9
AXB80266.1\|313131_315282_-	FAD-dependent oxidoreductase	NA	NA	NA	NA
AXB80267.1\|315418_316486_+	Zn-dependent alcohol dehydrogenase	A0A2L2DIY2	Acanthamoeba_polyphaga_mimivirus	4.1e-10	29.2

DBSCAN-SWA_17

324262 : 325054

Trichoplusia_ni_ascovirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXB80275.1\|324262_325054_-	short chain dehydrogenase	Q06VL0	Trichoplusia_ni_ascovirus	4.7e-11	29.0

DBSCAN-SWA_18

338482 : 344363

Mycobacterium_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXB80289.1\|338482_339307_+	alpha/beta fold hydrolase	G1BRG0	Mycobacterium_phage	6.2e-06	28.7
AXB80290.1\|339299_339821_+	flavin reductase	NA	NA	NA	NA
AXB80573.1\|339844_340612_+	2-oxopent-4-enoate hydratase	NA	NA	NA	NA
AXB80291.1\|340649_341597_+	acetaldehyde dehydrogenase (acetylating)	G8DDL4	Micromonas_pusilla_virus	1.6e-34	33.2
AXB80292.1\|341593_342640_+	4-hydroxy-2-oxovalerate aldolase	E5EQ69	Micromonas_sp._RCC1109_virus	8.3e-40	32.6
AXB80293.1\|342709_343570_+	sugar phosphate isomerase/epimerase	NA	NA	NA	NA
AXB80294.1\|343547_344363_+	SDR family NAD(P)-dependent oxidoreductase	Q06VL0	Trichoplusia_ni_ascovirus	8.3e-11	30.7

DBSCAN-SWA_19

348671 : 349571

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXB80298.1\|348671_349571_-	NAD(P)-dependent oxidoreductase	D2K0C8	Staphylococcus_phage	4.1e-19	40.2

DBSCAN-SWA_20

372430 : 376195

Bacillus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXB80316.1\|372430_373228_-	SDR family NAD(P)-dependent oxidoreductase	W8CYX9	Bacillus_phage	3.9e-05	41.4
AXB80317.1\|373277_374600_-	MFS transporter	NA	NA	NA	NA
AXB80318.1\|374602_376195_-	FAD-binding protein	A0A1V0SI18	Klosneuvirus	1.1e-54	32.0

DBSCAN-SWA_21

429750 : 431887

Stx2-converting_phage(100.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXB80349.1\|429750_431418_-\|transposase	IS66 family transposase	A0A0P0ZBS5	Stx2-converting_phage	9.4e-94	38.9
AXB80350.1\|431539_431887_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZBY2	Stx2-converting_phage	2.2e-29	54.7

DBSCAN-SWA_22

439595 : 441155

Stx2-converting_phage(100.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXB80357.1\|439595_441155_-\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	4.0e-70	33.9

DBSCAN-SWA_23

457055 : 458510

Tupanvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXB80370.1\|457055_458510_-	catalase	A0A2K9L0T1	Tupanvirus	3.0e-96	44.4

DBSCAN-SWA_24

462935 : 464987

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXB80373.1\|462935_464987_-	PAS domain S-box protein	W8CYF6	Bacillus_phage	1.5e-08	27.6

DBSCAN-SWA_25

475659 : 478660

Synechococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXB80382.1\|475659_476754_-	alcohol dehydrogenase	E3SJ82	Synechococcus_phage	9.7e-31	29.0
AXB80383.1\|477026_477734_+	DNA-binding response regulator	NA	NA	NA	NA
AXB80384.1\|478204_478660_+	(2Fe-2S)-binding protein	A0A0P0IVM8	Acinetobacter_phage	1.4e-07	33.8

DBSCAN-SWA_26

484429 : 485644

Emiliania_huxleyi_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXB80388.1\|484429_485644_-	5-aminolevulinate synthase	D2TEZ5	Emiliania_huxleyi_virus	6.1e-34	29.6

DBSCAN-SWA_27

489370 : 490141

Trichoplusia_ni_ascovirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXB80392.1\|489370_490141_-	SDR family NAD(P)-dependent oxidoreductase	Q06VL0	Trichoplusia_ni_ascovirus	4.9e-05	26.7

DBSCAN-SWA_28

493771 : 497981

Erysipelothrix_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXB80397.1\|493771_495169_+	FAD-containing oxidoreductase	A0A2K5B2C5	Erysipelothrix_phage	4.1e-50	32.5
AXB80398.1\|495182_496799_+	thioredoxin-disulfide reductase	G3MA85	Bacillus_virus	4.2e-30	30.3
AXB80399.1\|497126_497981_+	alpha/beta hydrolase	A0A1L7N183	Ralstonia_phage	6.2e-09	25.4

DBSCAN-SWA_29

505408 : 509417

Hokovirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXB80404.1\|505408_507595_+	PAS domain S-box protein	A0A1V0SGX0	Hokovirus	3.3e-06	24.4
AXB80405.1\|507779_509417_+	PAS domain-containing sensor histidine kinase	A0A2K9L0Z8	Tupanvirus	2.7e-08	22.0

DBSCAN-SWA_30

517856 : 518687

Mycobacterium_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXB80413.1\|517856_518687_+	alpha/beta hydrolase	A0A249XTE1	Mycobacterium_phage	2.8e-14	31.6

DBSCAN-SWA_31

544428 : 547458

Acinetobacter_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXB80426.1\|544428_547458_+	TonB-dependent receptor	A0A0P0I887	Acinetobacter_phage	5.2e-18	30.6

DBSCAN-SWA_32

555122 : 557059

Mycobacterium_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXB80591.1\|555122_556031_-	alpha/beta fold hydrolase	A0A291AV30	Mycobacterium_phage	1.7e-09	25.5
AXB80432.1\|556756_557059_-	integration host factor subunit alpha	Q2A099	Sodalis_phage	8.9e-11	39.3

DBSCAN-SWA_33

560576 : 567648

Ralstonia_phage(50.0%)

integrase

attL 557823:557838|attR 573718:573733

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
557823:557838	attL	NA	NA	NA	NA
AXB80437.1\|560576_561818_+	hypothetical protein	A0A0H4U087	Erysipelothrix_phage	4.1e-09	25.6
AXB80438.1\|561810_563784_+	hypothetical protein	Q2P9X0	Enterobacteria_phage	7.4e-13	31.9
AXB80592.1\|563991_564921_-	nucleotidyltransferase	NA	NA	NA	NA
AXB80439.1\|564980_565226_-	RNA polymerase subunit sigma	NA	NA	NA	NA
AXB80440.1\|565222_566503_-\|integrase	integrase	A0A221SAN4	Ralstonia_phage	2.6e-35	31.1
AXB80441.1\|566463_567648_-\|integrase	integrase	A0A221SAN4	Ralstonia_phage	2.7e-42	33.8
573718:573733	attR	NA	NA	NA	NA

DBSCAN-SWA_34

588461 : 589382

Geobacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXB80460.1\|588461_589382_-	lytic transglycosylase domain-containing protein	A0A0H3V0Q1	Geobacillus_virus	6.3e-15	45.1

DBSCAN-SWA_35

596178 : 599569

Leptospira_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXB80465.1\|596178_597355_+\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	2.4e-35	37.5
AXB80466.1\|597717_598734_+	hypothetical protein	NA	NA	NA	NA
AXB80467.1\|598771_599209_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
AXB80468.1\|599293_599569_-	HU family DNA-binding protein	B5TA87	Burkholderia_phage	1.9e-12	45.6

DBSCAN-SWA_36

646976 : 647870

Escherichia_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXB80499.1\|646976_647870_-	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	5.5e-16	27.3

DBSCAN-SWA_37

660908 : 662534

Catovirus(100.0%)

holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXB80508.1\|660908_662534_-\|holin	glucose-methanol-choline oxidoreductase	A0A1V0S9J5	Catovirus	2.1e-45	28.0

DBSCAN-SWA_38

669217 : 670534

Pandoravirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXB80513.1\|669217_670534_-	glycoside hydrolase family 1 protein	A0A0B5JD41	Pandoravirus	5.2e-15	26.6

DBSCAN-SWA_39

676774 : 677737

Ralstonia_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXB80517.1\|676774_677737_-	recombinase family protein	A0A1W5LU24	Ralstonia_phage	1.1e-30	53.6

DBSCAN-SWA_40

689143 : 690091

Wolbachia_phage(100.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXB80527.1\|689143_690091_-\|transposase	IS110 family transposase	Q75QL1	Wolbachia_phage	1.7e-23	32.8

DBSCAN-SWA_41

700939 : 708759

Bacillus_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXB80538.1\|700939_701941_-	MucR-family transcriptional regulator	A0A1P8VVG0	Erythrobacter_phage	2.6e-22	47.6
AXB80539.1\|702100_704128_-	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	2.6e-37	37.5
AXB80540.1\|704495_705233_-	GGDEF domain-containing protein	G3MA91	Bacillus_virus	2.2e-23	33.7
AXB80541.1\|705379_705670_-	hypothetical protein	NA	NA	NA	NA
AXB80542.1\|705777_708759_+	phosphodiesterase	G3MA91	Bacillus_virus	1.3e-13	27.5

DBSCAN-SWA_42

715827 : 718432

Erythrobacter_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXB80551.1\|715827_716304_+	transcriptional regulator	A0A1P8VVG0	Erythrobacter_phage	5.0e-24	46.5
AXB80552.1\|716622_717612_+	histidine kinase	NA	NA	NA	NA
AXB80553.1\|717958_718432_+	heat-shock protein	A0A1D8KN82	Synechococcus_phage	1.9e-23	41.1

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. CP030352

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: CP030352_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP030352_1

1298940-1299043

Orphan

Consensus_repeat	Method
CCGCTCATCCTGAGCTTGTCGAAGGATC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP030352_1

>merge|CP030352|1|1298940-1299043|CRISPRCasFinder
CCGCTCATCCTGAGCTTGTCGAAGGATCAGCGGCGCGAAGCTTAGGGAAAGTGCCACAGAGAGCAGACCGCCAACCCCGCTCATCCTGAGCTTGTCGAAGGATC

>CP030352|1|1|1298940-1299043|CRISPRCasFinder
CCGCTCATCCTGAGCTTGTCGAAGGATC	AGCGGCGCGAAGCTTAGGGAAAGTGCCACAGAGAGCAGACCGCCAACC
CCGCTCATCCTGAGCTTGTCGAAGGATC

Protein	Signature genes	Signature genes Name	Protein_function
CP030352.1\|AXB76164.1\|1294133_1294799_-\|monofunctional-biosynthetic-peptidoglycan-transglycosylase	unknown	unknown	gnl\|CDD\|234603
CP030352.1\|AXB78065.1\|1307275_1308952_+\|DUF87-domain-containing-protein	unknown	unknown	gnl\|CDD\|376671
CP030352.1\|AXB76172.1\|1302844_1304284_+\|glycosyl-transferase-family-protein	unknown	unknown	gnl\|CDD\|237800
CP030352.1\|AXB76162.1\|1289612_1290581_-\|cation-transporter	unknown	unknown	gnl\|CDD\|224151
CP030352.1\|AXB76167.1\|1296961_1297369_+\|peptidase	unknown	unknown	gnl\|CDD\|163701
CP030352.1\|AXB76163.1\|1290968_1293599_+\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|224544
CP030352.1\|AXB78062.1\|1289198_1289579_+\|ribonuclease-HI	unknown	unknown	gnl\|CDD\|260011
CP030352.1\|AXB76176.1\|1308969_1310409_-\|MATE-family-efflux-transporter	unknown	unknown	gnl\|CDD\|240543
CP030352.1\|AXB76168.1\|1297423_1298086_+\|histidine-phosphotransferase	unknown	unknown	gnl\|CDD\|227675
CP030352.1\|AXB76166.1\|1295998_1296943_-\|RluA-family-pseudouridine-synthase	unknown	unknown	gnl\|CDD\|161659
CP030352.1\|AXB76171.1\|1302207_1302639_+\|lactoylglutathione-lyase	unknown	unknown	gnl\|CDD\|319900
CP030352.1\|AXB76169.1\|1299454_1300240_-\|serine/threonine-protein-phosphatase	unknown	unknown	gnl\|CDD\|277316
CP030352.1\|AXB78063.1\|1298113_1298818_+\|N-acetylmuramoyl-L-alanine-amidase	unknown	unknown	gnl\|CDD\|225567
CP030352.1\|AXB76175.1\|1306386_1307151_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|370581
CP030352.1\|AXB76165.1\|1294995_1295901_-\|RNA-polymerase-sigma-factor-RpoH	unknown	unknown	gnl\|CDD\|235838
CP030352.1\|AXB76173.1\|1304280_1305429_+\|hypothetical-protein	unknown	unknown	unknown
CP030352.1\|AXB78064.1\|1301352_1302063_-\|SIMPL-domain-containing-protein	unknown	unknown	gnl\|CDD\|225414
CP030352.1\|AXB76174.1\|1305475_1306390_+\|sulfite-exporter-TauE/SafE-family-protein	unknown	unknown	gnl\|CDD\|376667
CP030352.1\|AXB76161.1\|1287850_1289113_+\|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpX	unknown	unknown	gnl\|CDD\|235422
CP030352.1\|AXB76170.1\|1300505_1301270_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|286740

Protein	Function_ID	Function_description	E-value
CP030352.1\|AXB76164.1\|1294133_1294799_-\|monofunctional-biosynthetic-peptidoglycan-transglycosylase	gnl\|CDD\|234603	PRK00056, mtgA, monofunctional biosynthetic peptidoglycan transglycosylase; Provisional.	7.75066e-95
CP030352.1\|AXB78065.1\|1307275_1308952_+\|DUF87-domain-containing-protein	gnl\|CDD\|376671	pfam01935, DUF87, Domain of unknown function DUF87. The function of this prokaryotic domain is unknown. It contains several conserved aspartates and histidines that could be metal ligands.	3.18776e-52
CP030352.1\|AXB76172.1\|1302844_1304284_+\|glycosyl-transferase-family-protein	gnl\|CDD\|237800	PRK14716, PRK14716, glycosyl transferase family protein.	1.77531e-158
CP030352.1\|AXB76162.1\|1289612_1290581_-\|cation-transporter	gnl\|CDD\|224151	COG1230, CzcD, Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism].	9.71987e-94
CP030352.1\|AXB76167.1\|1296961_1297369_+\|peptidase	gnl\|CDD\|163701	cd08070, MPN_like, Mpr1p, Pad1p N-terminal (MPN) domains with catalytic isopeptidase activity (metal-binding). This family contains archaeal and bacterial MPN (also known as Mov34, PAD-1, JAMM, JAB, MPN+)-like domains. These domains contain the signature JAB1/MPN/Mov34 metalloenzyme (JAMM) motif, EXnHS/THX7SXXD, which is involved in zinc ion coordination and provides the active site for isopeptidase activity for the release of ubiquitin from ubiquitinated proteins (thus having deubiquitinating (DUB) activity) that are tagged for degradation. The JAMM proteins likely hydrolyze ubiquitin conjugates in a manner similar to thermolysin, in which the zinc-polarized aqua ligand serves as the nucleophile, compared with the classical DUBs that do so with a cysteine residue in the active site.	1.97632e-33
CP030352.1\|AXB76163.1\|1290968_1293599_+\|TonB-dependent-receptor	gnl\|CDD\|224544	COG1629, CirA, Outer membrane receptor proteins, mostly Fe transport [Inorganic ion transport and metabolism].	7.78267e-23
CP030352.1\|AXB78062.1\|1289198_1289579_+\|ribonuclease-HI	gnl\|CDD\|260011	cd09279, RNase_HI_like, RNAse HI family that includes archaeal, some bacterial as well as plant RNase HI. Ribonuclease H (RNase H) is classified into two evolutionarily unrelated families, type 1 (prokaryotic RNase HI, eukaryotic RNase H1 and viral RNase H) and type 2 (prokaryotic RNase HII and HIII, and eukaryotic RNase H2). RNase H is an endonuclease that cleaves the RNA strand of an RNA/DNA hybrid in a sequence non-specific manner. RNase H is involved in DNA replication, repair and transcription. RNase H is widely present in various organisms, including bacteria, archaea and eukaryotes and most prokaryotic and eukaryotic genomes contain multiple RNase H genes. Despite the lack of amino acid sequence homology, type 1 and type 2 RNase H share a main-chain fold and steric configurations of the four acidic active-site (DEDD) residues and have the same catalytic mechanism and functions in cells. One of the important functions of RNase H is to remove Okazaki fragments during DNA replication. Most archaeal genomes contain only type 2 RNase H (RNase HII); however, a few contain RNase HI as well. Although archaeal RNase HI sequences conserve the DEDD active-site motif, they lack other common features important for catalytic function, such as the basic protrusion region. Archaeal RNase HI homologs are more closely related to retroviral RNase HI than bacterial and eukaryotic type I RNase H in enzymatic properties.	2.47325e-12
CP030352.1\|AXB76176.1\|1308969_1310409_-\|MATE-family-efflux-transporter	gnl\|CDD\|240543	cd13138, MATE_yoeA_like, Subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins similar to Bacillus subtilis yoeA. The integral membrane proteins from the MATE family are involved in exporting metabolites across the cell membrane and are responsible for multidrug resistance (MDR) in many bacteria and animals. A number of family members are involved in the synthesis of peptidoglycan components in bacteria.	3.00867e-111
CP030352.1\|AXB76168.1\|1297423_1298086_+\|histidine-phosphotransferase	gnl\|CDD\|227675	COG5385, COG5385, Uncharacterized protein conserved in bacteria [Function unknown].	1.28275e-37
CP030352.1\|AXB76166.1\|1295998_1296943_-\|RluA-family-pseudouridine-synthase	gnl\|CDD\|161659	TIGR00005, Ribosomal_large_subunit_pseudouridine_synthase_D, pseudouridine synthase, RluA family. In E. coli, RluD (SfhB) modifies uridine to pseudouridine at 23S RNA U1911, 1915, and 1917, RluC modifies 955, 2504 and 2580, and RluA modifies U746 and tRNA U32. An additional homolog from E. coli outside this family, TruC (SP\|Q46918), modifies uracil-65 in transfer RNAs to pseudouridine. [Protein synthesis, tRNA and rRNA base modification].	3.22969e-115
CP030352.1\|AXB76171.1\|1302207_1302639_+\|lactoylglutathione-lyase	gnl\|CDD\|319900	cd07233, GlxI_Zn, Glyoxalase I that uses Zn(++) as cofactor. This family includes eukaryotic glyoxalase I that prefers the divalent cation zinc as cofactor. Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic glyoxalase I uses nickel. However, eukaryotic Trypanosomatid parasites also use nickel as a cofactor, which could possibly be explained by acquiring their GLOI gene by horizontal gene transfer. Human glyoxalase I is a two-domain enzyme and it has the structure of a domain-swapped dimer with two active sites located at the dimer interface. In yeast, in various plants, insects and Plasmodia, glyoxalase I is four-domain, possibly the result of a further gene duplication and an additional gene fusing event.	3.19228e-31
CP030352.1\|AXB76169.1\|1299454_1300240_-\|serine/threonine-protein-phosphatase	gnl\|CDD\|277316	cd00144, MPP_PPP_family, phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain. The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.	2.58575e-15
CP030352.1\|AXB78063.1\|1298113_1298818_+\|N-acetylmuramoyl-L-alanine-amidase	gnl\|CDD\|225567	COG3023, ampD, N-acetyl-anhydromuramyl-L-alanine amidase [Cell envelope biogenesis, outer membrane].	9.76157e-75
CP030352.1\|AXB76175.1\|1306386_1307151_+\|hypothetical-protein	gnl\|CDD\|370581	pfam09608, Alph_Pro_TM, Putative transmembrane protein (Alph_Pro_TM). This family consists of predicted transmembrane proteins of about 270 amino acids. Members are found, so far, only among the Alphaproteobacteria and only once in each genome.	4.04184e-95
CP030352.1\|AXB76165.1\|1294995_1295901_-\|RNA-polymerase-sigma-factor-RpoH	gnl\|CDD\|235838	PRK06596, PRK06596, RNA polymerase factor sigma-32; Reviewed.	5.61702e-170
CP030352.1\|AXB78064.1\|1301352_1302063_-\|SIMPL-domain-containing-protein	gnl\|CDD\|225414	COG2859, COG2859, Uncharacterized protein conserved in bacteria [Function unknown].	1.5473e-40
CP030352.1\|AXB76174.1\|1305475_1306390_+\|sulfite-exporter-TauE/SafE-family-protein	gnl\|CDD\|376667	pfam01925, TauE, Sulfite exporter TauE/SafE. This is a family of integral membrane proteins where the alignment appears to contain two duplicated modules of three transmembrane helices. The proteins are involved in the transport of anions across the cytoplasmic membrane during taurine metabolism as an exporter of sulfoacetate. This family used to be known as DUF81.	5.67506e-25
CP030352.1\|AXB76161.1\|1287850_1289113_+\|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpX	gnl\|CDD\|235422	PRK05342, clpX, ATP-dependent Clp protease ATP-binding subunit ClpX.	0
CP030352.1\|AXB76170.1\|1300505_1301270_+\|hypothetical-protein	gnl\|CDD\|286740	pfam09694, Gcw_chp, Bacterial protein of unknown function (Gcw_chp). This entry represents a conserved hypothetical protein about 240 residues in length found so far in Proteobacteria including Shewanella oneidensis and Ralstonia solanacearum, usually as part of a paralogous family. The function is unknown.	8.71067e-49

>CP030352.1|AXB78063.1|1298113_1298818_+|N-acetylmuramoyl-L-alanine-amidase
MNRWLVNRTVSSPNWNERKLPVTMAVLHYTGMKSADEALARMCDAEAQVSAHYMIDEDGMVTSLVPEDKRAWHAGQSYWRGITDVNSASIGIELVNPGHDWGYRPFPEPQMDALTPLLADILDRHDIPRANVVAHSDIAPARKQDPGEYFDWPRLAELGLALDIPRAKMNLFYDNPGALYLAMERFGYDITDGRAAVRAFQRRWRPEVIDGEIDGEIGAILLELLLERDTGRAR
>CP030352.1|AXB76168.1|1297423_1298086_+|histidine-phosphotransferase
MTTSSLELASLLCSRLCHDMLSPVGALSNGLELLADEKDPEMRARCFELLDQSARISTDKLKFFRLAFGAAGGFGEMVPVSEAKALIDALVSNNARVTLNWALPSDSLPKPAIKTLLNFALIGLEALPRGGTLDIAAEYRADPGSGHGGASEIVVRSSGPRIAFDRDVGRALEGTLPEGDLSSRTAPAAMLDQLARTIGGKLQYVLADDALVLGAVLPGA
>CP030352.1|AXB76167.1|1296961_1297369_+|peptidase
MEVEVTSGVLAALRDEAQKAGDEECCGLLLGGIEGDGAERIEVAEAAANVAANRCVHFEIDPLALLAAHKAARGGGRRVLGYYHSHPTGDPIPSATDCEHSTGDSRIWAIIARSEVAFWRDSGNGFVQLAPRAVD
>CP030352.1|AXB76166.1|1295998_1296943_-|RluA-family-pseudouridine-synthase
MGLKSNIIEGRTGAPGGRLDKALADASGLSRERIKALMGEGRISLAGAPVSSASSKVEPGTAFTIEVPEAAPAEAVAQDIPLSVVFEDEYLIVIDKPAGLVVHPAAGNLDGTLVNALLHHCRGQLSGIGGVARPGIVHRIDKDTSGLLVVAKTDKAHEGLAVQFADHSIVRAYLAVVGGRPVPAARTVTGSIARSNHDRKKMALVEDGRGKHAVTHFRTLELMNGSTLIECRLETGRTHQVRVHMASIGHALLGDPVYGRTPSSLRAVLQRLDFRRQALHAAELGFVHPVKGETVHFTSPLPDDMRTLIDELRN
>CP030352.1|AXB76165.1|1294995_1295901_-|RNA-polymerase-sigma-factor-RpoH
MSNNRNVATVPALGGEQSLNRYLSEIRKFPVLAPEQEYMLAKRYSEHEDPAAAAQLVTSHLRLVAKIAMGYRGYGLPVSELISEGNIGLMQGVKKFEPERGFRLATYAMWWIKASIQEYILRSWSLVKMGTTAAQKKLFFNLRRMKKNLDAYEDTDLHPRDVTKIATTLGVSEQEVVNMNRRMMMGGDASLNVSLREEGEGQWQDILADDRPLQDQTVAEAEEATVRHDMLVEAMSSLNERERDILMERRLTEDPKTLEELSQVYSVSRERVRQIEVRAFEKVQKAMNRIATDKRLLPAGA
>CP030352.1|AXB76164.1|1294133_1294799_-|monofunctional-biosynthetic-peptidoglycan-transglycosylase
MRLIAKFILWFVAISVGLVVLYRFVPPPVTVTMLVDGNGITKDWEPLSNIDRNMVAGVVAAEDGKFCTHNGFDTDAIEKAMERNAKGGRLRGGSTISQQTAKNVFLWQGEGWTRYARKGLEVWFTFLIENLWDKRRIMEVYLNVAETGIGTYGVEAGAQRYWGKSAANLSTAEAGRMAAALPSPKTRSVTNPSGFTRHYGNTIAGRIGMVKRDGYDACVYE
>CP030352.1|AXB76163.1|1290968_1293599_+|TonB-dependent-receptor
MKSHTFLKIATSTLALGAAAAALPAFAQSTGSADFDGDAIIVTGGRINDIVGVRTPDSPKAKVEIGKEFIASQRAGQSVNEIINLVPGVSFTNNDPWGSSGGSFTIRGFDSSRIAQTFDGIPLNDSGNYAVYSNQQVDAEIIETVNVNLGSTDVDTPTAAAVGGTVNINTKVPDDQFGVMTSLSYGDIAAKDSGGEDRSFQRYFAKVETGEFTSIGTKAYFTGSFARNGATFANYGKVQKKQFNTKIYQPIGDNGDFISLSGHYNENRNNFGGSPLRASAFNSDKSSRFYEVAGGIPCTVSQTSVVNSCGTSFERRYNPSNTGNVRLASLFTLTDKLTLSVDAAYQYTKANGGGTTSANEGLYTRAAVFNTTTGALITPAFSGTGNYGGAFYFGRDLNGDGAIGQVTLVQPSQTKTNRYVAIANLSYELNDTNRVRLSYSFDRAHHRQTGAAGFLKANGEPFDVFPVNDPLTDRAGNVLQKRDRDSYATLHQIAGEYRGDFLNDQLTVLVGVRAPFFKRDLTQNCFTTSSGGFVDCVPADQQAAYIAARPYSFNATTGRASGAALPGSRKLDYDKILPNVGAVFKITPEVSIAGSYAKNLSVPSTDALYNAFYFPADSDAAYRVPESSNSFDASLRYSTPVVQASITGWYSKYKNRLVTAYDIDGNGTDTNLGPVKKYGVDASFSVRPVQPLSLYVFGSWIKSEIQNDAVTGSCAATSDIALAGLCYNVAQTDGTTISYLRTAGKRERAAPEWLFGGRAQVDVGDFQFGAQAKYTSDRFLNDINGEVETVTVAGAPKIIAPGGKFKAYTVVDLNVRYNLESLGLAKSQIQLNVSNLFDEYYVGSFSGGLDTLASSTSAFVNFGSPRAISATFIMGF
>CP030352.1|AXB76162.1|1289612_1290581_-|cation-transporter
MGAEHHHGHSHGHGHSHGHGHSHGHAHHAPPPGSVGKAFAIAVSLNLVFVVAEIAAGLLSGSMALLADAGHNLSDVLSLVLAWVASVLAARPPSERFTYGLKSSSILAAIANAALLWVAIGAILVETIRRMADPEPVAGTTMMVVAGLGIAVNALSALLFAKGAKSDLNLRAAFVHLMADALVSVGVVIAGVVIATTGWALVDPIASLVITAVIGWSSWGLLRDALHMGMLGVPEGIDGPKVRAFLESQPGVTRVHDLHIWPMSTTETALTAHLLMPGGQPGDAFLCALADGLAREFGIGHPTIQIETDAASPCALESEAVV
>CP030352.1|AXB78062.1|1289198_1289579_+|ribonuclease-HI
MRRRLKVFFDGGCRPNPGQIEVAVVVRGAVYVFDDLGKGNNTDAEWLALIRALELAQSLGLADVELIGDARQIIDAADAVLRSGRADSGHAATFLALAGKGAPGRVRWIKREQNLAGIALAARHPR
>CP030352.1|AXB76161.1|1287850_1289113_+|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpX
MTKLSGSDAKSTLYCSFCGKSQHEVRKLIAGPTVFICDECVELCNDIIREETKAGIAGRKEGEIVSPREICEMLNDYVIGQERAKRVLSVAVHNHYKRLKHSGKQGDVELSKSNILLVGPTGSGKTLLAQTLAKTFDVPFTMADATTLTEAGYVGEDVENIILKLLQSSDYNVEKAQQGIVYIDEIDKISRKAENPSITRDVSGEGVQQALLKLMEGTTASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDKIIADRLQKRSIGFGAHVADPDKRRVGELLQKAEPEDLLKFGLIPEFVGRLPVIATLNDLDIEALVKILKEPKNALIKQYARLFELEDVELTFTDDALEAIAKKAIERKTGARGLRSIVEGLLLDTMFDLPTERDIAEVVVDKDVVEGRKEPVRVLKGDKAEEAA
>CP030352.1|AXB76169.1|1299454_1300240_-|serine/threonine-protein-phosphatase
MISMIRNLLGRRDVKRTPSIPSGERVYAVGDIHGRADLFEDLILAIEQDDAARGRAYTTVVLLGDLIDRGHDSAAVVERARRWGSQRNVEFIQGNHEEMLLVSRDDTDALRSFLKFGGLETILSYGVDPEAASSAELDELQRLMNAAIPQDDIDFIDAFKKMVRIGDYVFVHAGVRPDTPLEHQSGRDCRWIREPFLSHRGDYGGFVVHGHTITPEPDVCTNRIGIDTGAFLHGTLTAIGLEGEERWFIQAHDSAAHSQAA
>CP030352.1|AXB76170.1|1300505_1301270_+|hypothetical-protein
MLLSVRGAIGATLLAGTALSAAPAFAQDAEAPKEITVTGSAAVTSDYRFRGVSQSGGDVAIQGGITVSHASGFYVGTWGSSIDLGSLYGSTELDLFGGWTGALTSGLTTDVGLLYYAYPNGTGGDSEFFEPYASVTGQVGPGKLKVGATYAWKQSALPNFAGNRKSDNLYVYGNLDVAIPSTPLTVSGHLGYTDGALAPSYYSTSDRTGLDWSIGASATVYGPLSLSVSYVGVTGPSVDGYTDDTVVATLTASF
>CP030352.1|AXB78064.1|1301352_1302063_-|SIMPL-domain-containing-protein
MNSVTMRWLASSAILAVGLVIGGFALGDGIKRAQRADRAVTVKGLAEREVTADLATWTISYSASASDLATAQSSVDRDTAQIRAFFSELGFPADALQPTGVNVNQVKDNNGIVTFTVRQRVSLRTTDIKRAQNAVRRQFDLVKRGVILEEGSGMAYTFTKLNGIKPEMVAAATNDARAAAEQFAKDSGSQVGAIKNAAQGYFSVEARDGDSGGGWGQSDTPYKKVRVVTTIDFYLK
>CP030352.1|AXB76171.1|1302207_1302639_+|lactoylglutathione-lyase
MTRYLHTMIRVTDPDATIRFFELVGLKETRRFSSDQGRFTLIYLAAPGQEEAEVELTYNWPAEDGAAEEYTGGRNFGHLAFQVADIYETCQRLQDGGVTINRPPRDGHMAFVLTPDGISVELLQDGRLDPAEPWASMPNVGSW
>CP030352.1|AXB76172.1|1302844_1304284_+|glycosyl-transferase-family-protein
MVQGQVLEYVALCLQIAKHELLLFTGFWFILGALDDFGVDLCWIWLRLTGRARSGRITHSEASAPLAGRAAVVIAAWREAAVIGHTVSHALSVWRQDELTLYLGCYCNDPETIAAAMAAAGSDPRVRVVISESPGPTTKADCLNRIYAALCRDEQRYARRYSSVILHDAEDMVHPAELAVIDAGLAHADFVQLPVRAELQRASPWIGGHYADEFAEAHAKVMVVRDALGAAIPAAGVGCGFSREMIARIARRRGAAGRGEGGPFAAECLTEDYELGLLVRREGGRSRFLRVRDENGELVATRAYFPATLEESVRQKSRWIHGIAFQGWDRMGWSTGPTELWMALRDRRGPLTAIVLACAYVFLMIEGLQWLGAAAGIHGQVTVSPYLHGLLRLCLVGFLWRAAFRFAFTTREYGIIEGLGAVMRIPVANAIAILAGRRALASYVRSLQGQAVRWEKTEHAGHPSLLLPSMGEAARGLTR
>CP030352.1|AXB76173.1|1304280_1305429_+|hypothetical-protein
MSTGGGISRGHPVIALLAVLGGWVGGRVATWEPPVAAALQWAAPGASVPEGGFVADSLGGPQSLPGAGSTPVAVEAGHVYPAGFATARPVMPYWRYAMHPAASPRWNGALPAPADLPLIPGHLRSEFAMTESLPRFYAPEPPGMAQASPPSVSAKAQAGPPRVRRWSADTWALLRRDESGALASPGALPATYGASQAGAVLRYRLALASAYRPTAYMRTTSTLGQLQETSAALGLSARPFPSLPVIAALEGRLTEQGGHRRFQPVAMAVTELPWFALPAGFRGEAYAQAGYVAGRFATPFADGQFRGDRALFSFGKVAARIGGGVWGGAQKGAERLDAGPTASIAMPLGRGTAGRIAVDWRFRLAGDAVPNSGPALTLSAGF
>CP030352.1|AXB76174.1|1305475_1306390_+|sulfite-exporter-TauE/SafE-family-protein
MDVYLPIANLSVNGLIIVGLGALTGLLSGMFGVGGGFLTTPLMIFYGIPPTVAAASAASQVTGASVSGVFAHTRRGGVDYQMGAVMVAGGIIGTGLGAILFNLLEKLGQIDTVINILYVVLLGSIGGLMAKESIQSIRAERSGVPLPARKRRHHPMVASLPMRWRFYRSGLYISPLAPLLLGIGTGILTMLMGIGGGFVLVPAMLYILGMSANVVVGTSLFQILFVTMATTMMHALTTHAVDIVLAALLLLGSVSGAQVGAQFAQKASPVKLRLLLAVIVLLVAGRMALGLGYRPDEIYTVAPL
>CP030352.1|AXB76175.1|1306386_1307151_+|hypothetical-protein
MKAFASSLLALFALVMLTGARDPILVPEISQHEVNLQQGFTGTELLLFGAILTPEGSRAAQDYDIIVVLKGPTQSIVLREKQKVAGIWINVASTELRSAPSYYAIASTKPIADIVDDKTAAIYELGLKWLQLSPIGAIDPEEQARFSAGLVDVNRRNGLYREEEGGVKVSEQVLYQARIGLPSRVPTGIYTAETYAVSKGRVVASASSQVEVRKLGIERAIANFSDNYGFAYGLMAVFVSVAMGWLAGRLFALI
>CP030352.1|AXB78065.1|1307275_1308952_+|DUF87-domain-containing-protein
MDVDGLDQVRMPQAGTAPMTGAAPAHGQEPIGVVLEISGSGSRIAFDLERLNEIAADRDPSVALSGQVSSQVKIRVGNGWLLASVRNQKQDAKMSGAVLSDVDFLGEGEEERLTGRIMAFRRGVTFYPIPGTLVYPATSDDLRQIYASDGRSSIQVGNVYPTKDIRAGLYVDALLGKHFALLGSTGTGKSTSAALILHRICEHAPEGHIIMVDPHGEYAAAFRDTGVILDVTNLQMPYWLMNFEEHCEVLLTSRGDDRQLDAEILGKALLEARSKNRLAEQMGKITVDSPIPYLLSDLGMILNNAMGKLDKGHTSAPYLRIRSKIDEMKSDPRYQFMFSGMLVGDIMAEFISKLFRLPSRGRPISIIDVSGVPTEITSTVVAVLSRLVFDFAVWAREEQTRPILLVCEEAHRYVPNEKNADGSSVGRILSRIAKEGRKYGISLGLITQRPSDLAEGVLSQCGTIISMRLNNDRDQAFVRAAMPEGARGFLDSIPALRNRECIICGEGVAIPMRVSFDDLEEHKRPASADPSFTRLWNETGGEEEMVLRTVQRWRAQGR
>CP030352.1|AXB76176.1|1308969_1310409_-|MATE-family-efflux-transporter
MNEASPIPLGEETPSAASPQEQAAARPAMRGDLTKGPILKTLLLFSIPMLLSNVLQTLNGSVNAIWVGRLLGEAALAATANANIVMFLVFAAVFGFGMATTVRVGQHFGARDIDGARRTFGTGLGFCLIISVITGAIGWLGGGALLDALGTPAASRGEALAYLQVIFVTLPLGTINMMVSMGMRGAGDSKTPLYAMILAVTLDIAFNPILIMGLGPFPALGVAGSAMATACANTAGMLFQLWHIYRKDLSLRLRGPELRYLIPRGADLRYVVTKGLPMGAQMLIVSSAGLIMISLVNREGLNAAAAYGASLQLWNYLQMPAFAIGSAVSAMVAQSLGAGDHSRVDKVTMTGLGANLVMSTVVAALIVIFDHPLLALFLGGDSPAMPIAEHIQLICTASFVIVSVTMIMTGTMRAYGSVVPPLVILFLGLYPGRLGFYALAVPYIGSEAVWWAYPVGSALTVLITLAYYRMGNWRAAYKG

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Crispr_ID: CP030352_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP030352_2

1633601-1633764

Orphan

Consensus_repeat	Method
CGTGCTTCAGCCGTGAGAGGGCCGCGTCCTAACCGCTAGACGAAGGGGCCAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP030352_2

>merge|CP030352|2|1633601-1633764|CRISPRCasFinder
CGTGCTTCAGCCGTGAGAGGGCCGCGTCCTAACCGCTAGACGAAGGGGCCATTAGCCATTTTCGGTTTACCACACCATTCAGAAGAATGGTGACCCCTACGGGAATCGAACCCGTGCTTCAGCCGTGAAAGGGCCGCGTCCTAACCGCTAGACGAAGGGGCCAT

>CP030352|2|2|1633601-1633764|CRISPRCasFinder
CGTGCTTCAGCCGTGAGAGGGCCGCGTCCTAACCGCTAGACGAAGGGGCCAT	TAGCCATTTTCGGTTTACCACACCATTCAGAAGAATGGTGACCCCTACGGGAATCGAACC
CGTGCTTCAGCCGTGAAAGGGCCGCGTCCTAACCGCTAGACGAAGGGGCCAT

Protein	Signature genes	Signature genes Name	Protein_function
CP030352.1\|AXB76439.1\|1637697_1638660_-\|nitronate-monooxygenase	unknown	unknown	gnl\|CDD\|224981
CP030352.1\|AXB78098.1\|1636365_1637151_+\|hypothetical-protein	unknown	unknown	unknown
CP030352.1\|AXB76432.1\|1627932_1629780_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274350
CP030352.1\|AXB78099.1\|1638875_1640042_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379194
CP030352.1\|AXB78096.1\|1624452_1626594_+\|PEP-CTERM-system-histidine-kinase-PrsK	unknown	unknown	gnl\|CDD\|274349
CP030352.1\|AXB76436.1\|1632794_1633529_+\|extensin	unknown	unknown	gnl\|CDD\|369129
CP030352.1\|AXB78097.1\|1635845_1636274_+\|flavodoxin-family-protein	unknown	unknown	gnl\|CDD\|223728
CP030352.1\|AXB76441.1\|1641386_1643054_-\|2-isopropylmalate-synthase	unknown	unknown	gnl\|CDD\|235154
CP030352.1\|AXB76440.1\|1640116_1641130_-\|PAP2-family-protein	unknown	unknown	gnl\|CDD\|379588
CP030352.1\|AXB76435.1\|1632562_1632763_+\|hypothetical-protein	unknown	unknown	unknown
CP030352.1\|AXB76428.1\|1620364_1621063_-\|glutamine-amidotransferase	unknown	unknown	gnl\|CDD\|235919
CP030352.1\|AXB76433.1\|1629824_1630694_-\|3-methyl-2-oxobutanoate-hydroxymethyltransferase	unknown	unknown	gnl\|CDD\|234723
CP030352.1\|AXB76437.1\|1633854_1635642_-\|single-stranded-DNA-specific-exonuclease-RecJ	unknown	unknown	gnl\|CDD\|273193
CP030352.1\|AXB76430.1\|1623067_1624453_+\|TIGR03013-family-PEP-CTERM/XrtA-system-glycosyltransferase	unknown	unknown	gnl\|CDD\|274390
CP030352.1\|AXB76431.1\|1626593_1627967_+\|PEP-CTERM-box-response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|274348
CP030352.1\|AXB76442.1\|1643255_1643573_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|288556
CP030352.1\|AXB76434.1\|1630863_1632372_+\|amino-acid-permease	unknown	unknown	gnl\|CDD\|129987
CP030352.1\|AXB76443.1\|1645269_1645527_-\|ATP-synthase-F1-subunit-epsilon	unknown	unknown	gnl\|CDD\|184058
CP030352.1\|AXB76438.1\|1637170_1637755_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379603
CP030352.1\|AXB76429.1\|1621578_1622898_+\|amidohydrolase	unknown	unknown	gnl\|CDD\|349914

Protein	Function_ID	Function_description	E-value
CP030352.1\|AXB76439.1\|1637697_1638660_-\|nitronate-monooxygenase	gnl\|CDD\|224981	COG2070, COG2070, Dioxygenases related to 2-nitropropane dioxygenase [General function prediction only].	1.47047e-78
CP030352.1\|AXB76440.1\|1640116_1641130_-\|PAP2-family-protein	gnl\|CDD\|379588	pfam14378, PAP2_3, PAP2 superfamily.	3.257e-22
CP030352.1\|AXB76432.1\|1627932_1629780_+\|hypothetical-protein	gnl\|CDD\|274350	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein. This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator.	5.89488e-15
CP030352.1\|AXB78099.1\|1638875_1640042_+\|hypothetical-protein	gnl\|CDD\|379194	pfam13452, MaoC_dehydrat_N, N-terminal half of MaoC dehydratase. It is clear from the structures of bacterial members of MaoC dehydratase, pfam01575, that the full-length functional dehydratase enzyme is made up of two structures that dimerize to form a whole. Divergence of the N- and C- monomers in higher eukaryotes has led to two distinct domains, this one and MaoC_dehydratas. However, in order to function as an enzyme both are required together.	2.89261e-23
CP030352.1\|AXB78096.1\|1624452_1626594_+\|PEP-CTERM-system-histidine-kinase-PrsK	gnl\|CDD\|274349	TIGR02916, sensor_histidine_kinase, putative PEP-CTERM system histidine kinase. Members of this protein family have a novel N-terminal domain, a single predicted membrane-spanning helix, and a predicted cystosolic histidine kinase domain. We designate this protein PrsK, and its companion DNA-binding response regulator protein (TIGR02915) PrsR. These predicted signal-transducing proteins appear to enable enhancer-dependent transcriptional activation. The prsK gene is often associated with exopolysaccharide biosynthesis genes. [Protein fate, Protein and peptide secretion and trafficking, Signal transduction, Two-component systems].	2.7513e-152
CP030352.1\|AXB76436.1\|1632794_1633529_+\|extensin	gnl\|CDD\|369129	pfam06904, Extensin-like_C, Extensin-like protein C-terminus. This family represents the C-terminus (approx. 120 residues) of a number of bacterial extensin-like proteins. Extensins are cell wall glycoproteins normally associated with plants, where they strengthen the cell wall in response to mechanical stress. Note that many family members of this family are hypothetical.	3.48081e-63
CP030352.1\|AXB78097.1\|1635845_1636274_+\|flavodoxin-family-protein	gnl\|CDD\|223728	COG0655, WrbA, Multimeric flavodoxin WrbA [General function prediction only].	5.8168e-07
CP030352.1\|AXB76441.1\|1641386_1643054_-\|2-isopropylmalate-synthase	gnl\|CDD\|235154	PRK03739, PRK03739, 2-isopropylmalate synthase; Validated.	0
CP030352.1\|AXB76442.1\|1643255_1643573_-\|hypothetical-protein	gnl\|CDD\|288556	pfam11720, Inhibitor_I78, Peptidase inhibitor I78 family. This family includes Aspergillus elastase inhibitor and belongs to MEROPS peptidase inhibitor family I78.	4.37215e-14
CP030352.1\|AXB76428.1\|1620364_1621063_-\|glutamine-amidotransferase	gnl\|CDD\|235919	PRK07053, PRK07053, glutamine amidotransferase; Provisional.	6.66011e-104
CP030352.1\|AXB76433.1\|1629824_1630694_-\|3-methyl-2-oxobutanoate-hydroxymethyltransferase	gnl\|CDD\|234723	PRK00311, panB, 3-methyl-2-oxobutanoate hydroxymethyltransferase; Reviewed.	2.57898e-149
CP030352.1\|AXB76437.1\|1633854_1635642_-\|single-stranded-DNA-specific-exonuclease-RecJ	gnl\|CDD\|273193	TIGR00644, recJ, single-stranded-DNA-specific exonuclease RecJ. All proteins in this family are 5'-3' single-strand DNA exonucleases. These proteins are used in some aspects of mismatch repair, recombination, and recombinational repair. [DNA metabolism, DNA replication, recombination, and repair].	0
CP030352.1\|AXB76430.1\|1623067_1624453_+\|TIGR03013-family-PEP-CTERM/XrtA-system-glycosyltransferase	gnl\|CDD\|274390	TIGR03013, EpsB_2, sugar transferase, PEP-CTERM system associated. Members of this protein family belong to the family of bacterial sugar transferases (pfam02397). Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria (notable exceptions appear to include Magnetococcus sp. MC-1 and Myxococcus xanthus DK 1622 ). These genes are generally found near one or more of the PrsK, PrsR or PrsT genes that have been related to the PEP-CTERM system by phylogenetic profiling methods. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species. These proteins are homologs of the EpsB protein found in Methylobacillus sp. strain 12S, which is also associated with a PEP-CTERM system, but of a distinct type. A name which appears attached to a number of genes (by transitive annotation) in this family is "undecaprenyl-phosphate galactose phosphotransferase", which comes from relatively distant characterized enterobacterial homologs, and is considerably more specific than warranted from the currently available evidence.	1.5861e-152
CP030352.1\|AXB76431.1\|1626593_1627967_+\|PEP-CTERM-box-response-regulator-transcription-factor	gnl\|CDD\|274348	TIGR02915, Two_Component_Transcriptional_Regulator_Fis_family, PEP-CTERM-box response regulator transcription factor. Members of this protein family share full-length homology with (but do not include) the acetoacetate metabolism regulatory protein AtoC (see SP\|Q06065). These proteins have a Fis family DNA binding sequence (pfam02954), a response regulator receiver domain (pfam00072), and sigma-54 interaction domain (pfam00158). [Regulatory functions, DNA interactions].	0
CP030352.1\|AXB76434.1\|1630863_1632372_+\|amino-acid-permease	gnl\|CDD\|129987	TIGR00909, putative_amino_acid_transporter, amino acid transporter. [Transport and binding proteins, Amino acids, peptides and amines].	3.37975e-126
CP030352.1\|AXB76443.1\|1645269_1645527_-\|ATP-synthase-F1-subunit-epsilon	gnl\|CDD\|184058	PRK13449, atpC, ATP synthase F1 subunit epsilon.	2.0221e-40
CP030352.1\|AXB76438.1\|1637170_1637755_+\|hypothetical-protein	gnl\|CDD\|379603	pfam14412, AHH, A nuclease family of the HNH/ENDO VII superfamily with conserved AHH. AHH is a predicted nuclease of the HNH/ENDO VII superfamily of the treble clef fold. The name is derived from the conserved motif, AHH. It is found in bacterial polymorphic toxin systems and functions as a toxin module. Like WHH and LHH, the AHH nuclease contains 4 conserved histidines of which, the first one is predicted to bind a metal-ion and the other three ones are involved in activation of a water molecule for hydrolysis.	2.28518e-09
CP030352.1\|AXB76429.1\|1621578_1622898_+\|amidohydrolase	gnl\|CDD\|349914	cd05664, M20_Acy1-like, M20 Peptidase aminoacylase 1 subfamily. Peptidase M20 family, Uncharacterized subfamily of proteins predicted as putative amidohydrolases or hippurate hydrolases. These are a class of zinc binding homodimeric enzymes involved in the hydrolysis of N-acetylated proteins. N-terminal acetylation of proteins is a widespread and highly conserved process that is involved in the protection and stability of proteins. Several types of aminoacylases can be distinguished on the basis of substrate specificity. Aminoacylase 1 (ACY1) breaks down cytosolic aliphatic N-acyl-alpha-amino acids (except L-aspartate), especially N-acetyl-methionine and acetyl-glutamate into L-amino acids and an acyl group. However, ACY1 can also catalyze the reverse reaction, the synthesis of acetylated amino acids. ACY1 may also play a role in xenobiotic bioactivation as well as in the inter-organ processing of amino acid-conjugated xenobiotic derivatives (S-substituted-N-acetyl-L-cysteine).	1.30379e-158

>CP030352.1|AXB76436.1|1632794_1633529_+|extensin
MAFPPLDRIVLTILLAGCLFVAGRAWLHDHPQHDPWAPLTLDAAPGWATERKLAALRSDRAQCRAFLQRSGIGAIALAPAGEGACLRADRKALAAPAHLDVALRPAGAQATCSIDAGLAWWLRQGVQPAAQEIFGQAVVRIEHLGTANCRRIGGGDKGNWSEHARGNAIDIAAFVLADGRRVSVLRDWKASGPSGEEAAAFLHMVRDSACTRFSTVLSPDYNAAHADHLHLDQASRISGWSACR
>CP030352.1|AXB76435.1|1632562_1632763_+|hypothetical-protein
MAFIKALIPGALLTWIVSGVLGSNGSRGGMLAIEHVSLQGYGFHWSWSLFLAATGLAWAIFAMLDS
>CP030352.1|AXB76434.1|1630863_1632372_+|amino-acid-permease
MFGRVKPLDAILATAEKKSLHRSLGAFQLTMLGIGAVIGTGIFVLTAEAAQKAGPGMMLSFVIAGFVCAVAALCYAEMAAMVPVSGSAYTYSYAVMGETVAWMVGWALILEYAIAAGAVSVGWSGYFIGWLNSSFNIDIPLALVRGPFDGGIINLPAMLIAACVTALLIKGTKESATVNAVLVGIKILALTFFVFLTIPVIKSGQFTPFAPLGFAGISGAAASIFFAYVGFDAVSTAAEETKNPQRNMPIGLIGSLAICTIFYMLVAAGVIGTVGAQPVFGPGGEVLSPGTPALAQACSAIHENAVVCSKEALAWTLRQIDYPFVGWLVGAAAIIALPSVILMMMFGQTRIFFVMSRDGLLPEFFSKVHPRFHTPHVITLLTGVFVAIFAAFFPVGLLADVSNSGTLFAFAAVSIAVMVLRRTDPTRKRPFRTPAVMFTAPLAIVGCIYLFFSLSFHTIALFVGWAILGLIVYYAYSRSRSHVGLGLVEVHEVDTDAPPPAV
>CP030352.1|AXB76433.1|1629824_1630694_-|3-methyl-2-oxobutanoate-hydroxymethyltransferase
MSTTFQLDTATSRANPTPAPMKRLTVPAIRRRKKDGVTAEPIVMLTAYTARQAQLLDEHCDLLLVGDSLGQVIYGLPSSVPVTLDMMIAHGAAVVRGSYHAAVIVDMPFGTYEQSPQQAFENAARLLKETGCAGVKLEGGTAMAETVRFLNERGIPVMGHIGLTPQAVNVLGGYNARGRSDAEAAKIVADAKALDDAGAFSIVIEGVVEPIAIAATQAIACPSIGIGGSAQCDGQVLVTEDMLGMFERVPRFVKRYADMASLVSQAAAQYAAEVRDRSFPGIEQTYQPK
>CP030352.1|AXB76432.1|1627932_1629780_+|hypothetical-protein
MTCSSSTICSPEPAGRGGRRVAGWLGVSALVPLLCLVALFTGLCAQPAHGERPQREVLVEQAAKALARGDGIDAEAKLKAALVRGATGPDVSAMMGQALMAQGRRDRARPWLVPGRFSPATAAVGWRTLGLLERLDGNLPASGRAYDRALAIIPKDASLWVEIGHLRYAGGEHRLAIDAAEHALALDPGSVPALEFRGQLVRDRYGLLAAIPWFEQAIMRDPKDVSVLLEYAATLGELGHATECLTITRRVLQLSPKNPRAYYLQAALAARAGNYDLARRLLIRTKGKLDSQPGVQMLRGVVEIAAGNPSAAAEALEAVLHTLPDNRHARDLLARAIGMGRQYRYATLRFAEDIANDEASPYVLTMVARAWEALGDRQRAGELLDRAARPSVAALHILGDAGRIGELLELGQTGAAQSAAEAARKSDPGFYDAQAIAGDVQLALGHGAEAQARYVLATEIRMSESLFQRRFAAYAMARDVRGGRELVEGYLRQNPTSRPALRAAAQLSIGEGDLGRARAILSWLRDNGAEGDVQLLSDLAMAQAGTGDLEAAQGSALAAYRLQRASPLATQALGYSYAMLDSQPGAARALLDKAQAIAGNTPLIANARKQLRVKG
>CP030352.1|AXB76431.1|1626593_1627967_+|PEP-CTERM-box-response-regulator-transcription-factor
MTDTAARLPKLLIVEDDAGLQAQLKWAYEDFEVFVAGDRASAIALLRSEMPDVVTLDLGLPPDPDGTTEGFAVLDEIMALKPDTKVVVASGHGARESALQAIAHGAYDFYQKPVDIDTLGLIVRRALQLHRLEEENRRLAGKVEKDEKVLGRMITAAPEMVRVARTIERVANTNVSVMLLGASGTGKELLARGLHDASGRAKREFVAINCAAIPENLLESELFGHEKGAFTGAVKTTHGKIEQAAGGTLFLDEVGDIPLQLQVKLLRFLQERVIERVGSRESIPVDTRIVCATHQDLEAMIAEGRFREDLYYRLAEIVVRIPGLAERPGDPTLLAKAFLNRYAKEMNPRVRGFAADGLAAIDAWGWPGNVRELENRVKRAVIMADEKLVSAADLDLAEPDEQVVNALNLKTAREQSDRKVIRHALARSEGNISSTAKMLGISRPTLYDLLKQYDLQS
>CP030352.1|AXB78096.1|1624452_1626594_+|PEP-CTERM-system-histidine-kinase-PrsK
MIAGPSAVWKTIGVAFDLTGAIALASVAIWLATRRDRFGRAGTAVVIALFLTALWSLASAAATASPAVVFAPSLVESARNLAWLLVIYRLFASDGRHATLAPIRPVIFALAFVEMLHLAVDYGLSRLTIDGDVLRVAFEFNVMFRLLVTVGGLVLVHNLYAGSPRESRAALRWPAVGLAALWAFDLNLYTIAYLAGSWPYEIAALRGIATGALAACIAIAAAGNRDDLRLRPSRAVTFQTFSLLVIGVYLVGMVAVAQWLSYAGGNFARLIELAFLTLASALALVVLPSRRVRAWLKVTLAKHFFQHRYDYREEWLRFTRTIGSGGEESLPLGERVVQSIADVFESPAGLLLTPGDQGELTLAARWNWAEIEVPSVAIPLRGLGHFERTGYICDLDEVRGSATGDSPGSEWENDVPRWLIDHPRAWAMIPLVHYERLVGMVVLARPQLARKFDWEDFDLLRVIGQQVASYLAENSSQLALAESARFDDFHRRIAFVMHDIKNLASQFSLLARNAELHAEKPAFRADMLVTLRNSSDKLNALLARLSRYGSGGVDKLEPVPAAEVLSVVMERFRGTPQVVLAETRVAVITANRHSLEQVLMHLVQNAIDASRPESPVFVSLSVDGLNARFEVLDSGSGMSADFVRNRLFKPFVSTKTGGFGIGAFEARELVRAMRGRLDVESREGLGSRFVVRLPLAAASDIYQTLASHDQKVA
>CP030352.1|AXB76430.1|1623067_1624453_+|TIGR03013-family-PEP-CTERM/XrtA-system-glycosyltransferase
MIRLFKHYIPHAVVLLWLVDVLLLAIANETSWRLRSEQIGIDPGALVDRLGAHAAFAAVISLSMISVGVYGGEALRSKRFAAARLLVAISLGVIALSFADFLVGGQNFWRSTLAYSMAFAIVMLIFNRLILGAFLGTSSFRRRVLVLGAGERAQRLRVLGERPESGFAIVGYVTMSESAPVVEEAISRGAIHNLTRYVENLGVSEVVLALEERRNALPLKDLLRIKTAGVHVNEFSSFLERETGRVDLDTVNPSWLIFSDGFSSGRAISSASKRVFDIAVSALLLVVTAPVIVLFALLVKIDSKGPAFYRQPRVGLFGECFDVVKLRSMRTDAEVAGAQWASKDDPRVTRIGKFIRKVRIDELPQAWTVLKGEMSFVGPRPERPEFVADLEEQLRYYAERHMVKPGITGWAQINYPYGASIEDSRHKLEYDLYYAKNYTPFLDLLIILQTLRVVLWSEGAR
>CP030352.1|AXB76429.1|1621578_1622898_+|amidohydrolase
MRVPLLILASAVIGLPVSAQAQSVADSVSRDMPGLMEIYRDFHANPELSFQEVRSPRIMADAARKAGFTVTEKVGKTGIVAVLKNGAGPTVLIRADMDGLPVTEQTGLPFASTKRGISLAGVESGIMHACGHDTHMTSWIETARLLAARKSEWSGTLVMIGQPAEEAGSGALAMLEDGLYTRFPKPDYTVAFHDTPELPAGVVGAAKGWALANVDSVDIVVKGVGGHGAYPHTTRDPIVLGSAIVMKLQTLVSRETNPVDPVVVTVGSFHSGTRHNIISDEARLQLTVRSYSDETRERLLDGIRRIARGEAIASGIAEDQMPVVTVKEPHTRATWNTPEFTEQAVADLKARLGDDMVVFTPSVMGGEDFGELRRADEAHIKSLILWVGGADPAKLAAAKAGGAPMPSLHSPVWAPVADKVIGSASQALTLTALRLMPKR
>CP030352.1|AXB76428.1|1620364_1621063_-|glutamine-amidotransferase
MKTALIIRHVPHEGVAGYRQPIEDAGYAVSRIDVTDPEFAMLDLRQPDLLIMMGGPMGVYEQDRHPWITCQLRRLALRLEADRPTLGVCFGAQMMASALGAQVYPGPAKEVGFHPVEVHGHAADGPLRHVREVPVLHWHGDTFTRPEGVDVLASSTLYEHQAFRRGANLLALQFHAEMGEDPRFDAWMDQWPEAVVEAGGCPNALRDAHDELGPGAVAAGRAMIADWLSALN
>CP030352.1|AXB76437.1|1633854_1635642_-|single-stranded-DNA-specific-exonuclease-RecJ
MESRSASVFGIDRSLTGKAWRWRGGNMDLSDGPGGLEDDIVTQLLLSRGVARDDLARHRNPSLRAFLPDPSAFRDMDAAADRLTQAVMAGETVTVYGDYDVDGATSAALLLLLLRDLGQEGRYYIPDRLLEGYGPSGEALVRIAGEGSSLIVTVDCGAMAFEALEMAHQAGVDVIVVDHHKCSPQLPRAAALVNPNRLDEDELAASHGHLAAVGVAFLLAVATVRTLRGRGFFANRREPDLFALLDLVALGTVADVAALHGLNRAFVAQGLKVMAKRDNIGMSALIDASRLGRAPSCSDLGFALGPRINAGGRVGESTLGVRLLTSTNPDEAKDIAAQLSRLNDERRGIEQAVQEMAEMQLDRQHNRSVIVVSGEGWHPGVIGIVAGRIKEKTGKPTLVIAMGADEAGNGKGSGRSISGVDLGAAIIAAREMDLLVAGGGHAMAAGLTIAPGKLDALSDWLDERLAADVSRASSSQSMLLDLALNPGGLTPSLIETLESAGPYGMGWPGPRVAVGPVRIMKADVVGTDHLRLIVSGPDGGRFKAMAFRSAESEMGQALLHASQGRRLWLAGRAKIDDWGSRPQAELHLDDAAFCD
>CP030352.1|AXB78097.1|1635845_1636274_+|flavodoxin-family-protein
MAEAIYAGAGNHARLIAADDAVPDDLLAADGYVFVCPENLGSMTGMMKEMFDRCYYPLLGRIEGRPYATAIAAGSDGRGAQAQIDRIVTGWRLRRVTEPLIVNLGAQEPAAILAQKHVPQNRVKDCMDMGVGLAEGLALGIF
>CP030352.1|AXB78098.1|1636365_1637151_+|hypothetical-protein
MPHTFQQSGAGQLADAAGAGLSLLFQAGTRPGAQDVARLIESSHAAGLLARVSHMPEPEEGWLELLASGLTFDMRGLAPARPAPVTAPGYKFGFEDKDGTDGVFEAVELLPSGHIAAGGRLQPVLRTMMGLAADLALNLPVAGVAWGPAQTLMEPRYFSRMVLSWLSGGAFPALGLTALVRGTDGSIASQGLAHFTGQEMQIEGRAGENPADTVKLAIRVVDHLVRQGRIAEPLRIGTGPGALLLEPSQVGKLVLVWREAL
>CP030352.1|AXB76438.1|1637170_1637755_+|hypothetical-protein
MRSHLSFRAVNRNDRPGYDPGLQRHHLLPRQLLGNGAFARMFANIGGERYLFEDFRGNGLLLPCDELAALRMGLPLHRGPHRLYSQLVIERVGQIEAAWSAMRAADPAGAALQAHMRLDLLQRALRRYLLDGRRRRLRLNQRDPLGAGVDFTELDAMADALWGSTRAVVAPGVVLVQPTAALMPVRTRNSSFAD
>CP030352.1|AXB76439.1|1637697_1638660_-|nitronate-monooxygenase
MPLPALFQSLRLPVIAAPMFIVSNPDLVIAQVRAGVVGSFPALNARPASQLDEWLHQITEATQESNVPFAVNLIVHRTNNRLEEDLALLEKWKVPLVITSLGAREDVNAAVHGWGGKVLHDVIDDTFARKAVAKGADGLIAVAAGAGGHAGLQSPFALMQEIRAWFDGPVALSGAIACGRSILAAQAMGADFAYIGTPWIATPEANAVDAYKQAIVEGAAADIVNSNLFTGVHGNYLRPSIVAAGMDPDNLPDGDKSQMSFASGGNMDAKAWKDIWGAGQGIAAVHAIEPVADRVATLAAQYQSAKDELRVRTGMSAAVG
>CP030352.1|AXB78099.1|1638875_1640042_+|hypothetical-protein
MAQQEFDCSDIDQYLGKVIDSSPIREPLGNNDIRRWVQAMHYPNLAHFDPAYAAASRWGKLVAPQSFPIVMDDSHGTSSSCMGRIAESHLLFGGDEFWHYGPRVFGGDVISNERIPYDYAVKQTGFGPTCFQRGDNYYRNQNGELIAKQRSTAIRYRAAAGGDTVNTAEFDEPDWTDAELAQLEERKFAWVQMLHDLGHGERWWDDVSVGDQLPERVFGPHTVASFATEWRSYLFTVWGTLDRRQIDLEALGFTKEMAGHENDPVMERINPAITDGAYYGPSRGHLFPKYARKIGMPRAYGYGASMGAWVTDYLAGWAGEWGMVVHSTANYRGPALSGDVTIQTAEVVDKMIDDEGRHIIQVKHLMQNQKGVKMCLGLAEIELPKKPG
>CP030352.1|AXB76440.1|1640116_1641130_-|PAP2-family-protein
MPSMRPSWATTATAVAAGQTNHPEILTPALVAVRQSGPLIRRHLLIALLLSLALLSTLLHLAQLHINPLGQGNVPFYAAGLIALALRFGLPRTTWRHAAPVAHFSEYVGIFTIVTLMGASASYPVAALTHGYADVTLQAIDEAMGFDWLDWYRLVADHPVLQALGTIAYRSIYLTPILLLWSAARSGQHERAYRFIAGFWVASIITLAAFTLMPAVGPFSHLWHEQIRYMPESELWQSGLLPALRAHSVHIVDLGQLRGIVSAPSFHTAAAVLYIAAGWRCPSLRWPVTVINAAMLLSTPVEGTHYLIDMILGVMVALTALALVGLYERKVIAPHRA
>CP030352.1|AXB76441.1|1641386_1643054_-|2-isopropylmalate-synthase
MTMLKDPSVKYRPFPQIQLENRQWPSQVITKAPRWLSTDLRDGNQALIDPMGAEKKTRFFDLLVKVGLKEIEVGFPSAGATEFDFIRGLVDDKRIPEDVLVQVLTQSRADLIERTFESLAGVHAAIVHLYNAVSPLWRTVVFGMEKHEIRAIAENGAKAMRDQAAKHPQTKWHFEYSPETFSTAELDFSIECCEAVMNILQPTPENPIILNLPATVEAATPNIYADQIEYFCRNLPNRESAVISLHTHNDRGTGVAAAELGLMAGADRVEGCLFGNGERTGNCCLVTVALNMYTQGVDPELDFSNIDDVIQTVEYCNQLKVAERHPYGGELVFTAFSGSHQDAIKKGFAAQETRNDEMWAVPYLPIDPADLGRDYEAVIRVNSQSGKGGFAWVIEQDQGLKLPKRMQAHFSKHVQELADELGRELQAADIWNVFQKAYRLEDGQRFQLNDWDEGRAADGARVFAGKIGVDGKEQSVSGKGNGLISSVTATIAESFGVHLDVRDYAEHSMGKSTDARAAAYVECVLPDGRTVWGVGIDEDVATASVRAVLSAANAV
>CP030352.1|AXB76442.1|1643255_1643573_-|hypothetical-protein
MSRTKIFALPAVLATMLSACSAQTPPPENVPPPAAAMEPSCGADQLGGYIGRKASDDVIAAITAWRGDKPVRVLHPDSMVTMDYRPDRLNIDLDANGIIKGLRCT
>CP030352.1|AXB76443.1|1645269_1645527_-|ATP-synthase-F1-subunit-epsilon
MPLHFELVTPAKLVRSEEVHMVVVPGTEGEFGVLAGHAPFMSTIKDGALKVYRTENGAPEEIRITGGFAEVGDAGLTVLAEHVEG

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

423368 : 487609

Burkholderia_phage(31.03%)

plate,capsid,portal,protease,terminase,integrase,tail,head

attL 423295:423333|attR 461532:461570

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
423295:423333	attL	NA	NA	NA	NA
AXB75444.1\|423368_424445_-\|integrase	site-specific integrase	A0A160DFH7	Gordonia_phage	8.1e-06	27.2
AXB75445.1\|424449_424728_-	DNA-binding protein	NA	NA	NA	NA
AXB75446.1\|424724_425003_-	hypothetical protein	NA	NA	NA	NA
AXB75447.1\|424999_425197_-	hypothetical protein	NA	NA	NA	NA
AXB75448.1\|425199_425442_-	DUF2312 domain-containing protein	A0A0F6R615	Sinorhizobium_phage	1.8e-14	48.8
AXB75449.1\|425456_425957_-	hypothetical protein	NA	NA	NA	NA
AXB75450.1\|425974_428704_-	bifunctional DNA primase/helicase	A0A077K8T2	Ralstonia_phage	3.7e-196	42.4
AXB77971.1\|428707_428887_-	hypothetical protein	NA	NA	NA	NA
AXB75451.1\|429188_429494_-	transcriptional regulator	NA	NA	NA	NA
AXB75452.1\|429493_429985_-	hypothetical protein	NA	NA	NA	NA
AXB75453.1\|429981_430266_-	hypothetical protein	NA	NA	NA	NA
AXB75454.1\|430395_430887_+	transcriptional regulator	NA	NA	NA	NA
AXB75455.1\|431190_431652_+	DUF2939 domain-containing protein	NA	NA	NA	NA
AXB75456.1\|431689_432058_+	hypothetical protein	NA	NA	NA	NA
AXB75457.1\|432094_433108_-	phage late control D family protein	R4JDM6	Burkholderia_phage	6.3e-69	44.0
AXB75458.1\|433104_433518_-	oxidoreductase	Q9ZXJ9	Pseudomonas_virus	2.2e-28	47.6
AXB75459.1\|433524_435960_-\|tail	phage tail tape measure protein	Q9ZXK0	Pseudomonas_virus	5.7e-39	24.0
AXB75460.1\|435963_436101_-\|tail	GpE family phage tail protein	Q858U8	Yersinia_virus	2.5e-05	57.9
AXB75461.1\|436109_436427_-\|tail	phage tail assembly protein	A4PE51	Ralstonia_virus	1.9e-19	56.5
AXB75462.1\|436512_437025_-\|tail	phage major tail tube protein	A0A1S5NNH7	Burkholderia_phage	3.1e-40	47.3
AXB75463.1\|437065_438241_-\|tail	phage tail protein	F1BUU3	Erwinia_phage	6.8e-115	55.7
AXB75464.1\|438255_438600_-	oxidoreductase	V9IQW0	Stenotrophomonas_phage	2.2e-21	46.5
AXB75465.1\|438596_439154_-\|plate	phage baseplate assembly protein V	V9IQH1	Stenotrophomonas_phage	7.3e-27	52.9
AXB75466.1\|439514_439955_+	hypothetical protein	NA	NA	NA	NA
AXB75467.1\|439995_440811_-	DNA adenine methylase	A0A291AUP9	Sinorhizobium_phage	1.9e-84	56.5
AXB75468.1\|440982_441267_-	hypothetical protein	NA	NA	NA	NA
AXB75469.1\|441270_442179_-	hypothetical protein	NA	NA	NA	NA
AXB75470.1\|442183_445867_-	hypothetical protein	B5TAB2	Burkholderia_phage	1.3e-66	38.2
AXB75471.1\|445870_446881_-	hypothetical protein	K4NZW8	Burkholderia_phage	4.3e-25	39.2
AXB75472.1\|446880_447519_-\|tail	phage tail protein I	A0A1S6L000	Salmonella_phage	4.9e-19	31.4
AXB77972.1\|447515_448421_-\|plate	baseplate assembly protein	V9IQV9	Stenotrophomonas_phage	6.5e-73	50.5
AXB75473.1\|448894_449077_+	hypothetical protein	NA	NA	NA	NA
AXB75474.1\|449293_449965_-	phage virion morphogenesis protein	A0A2H4J927	uncultured_Caudovirales_phage	5.2e-11	47.2
AXB75475.1\|449961_450444_-\|tail	phage tail protein	A0A1S5NPS3	Burkholderia_phage	1.2e-25	47.4
AXB75476.1\|450427_450625_-	hypothetical protein	NA	NA	NA	NA
AXB75477.1\|450569_450980_-	hypothetical protein	NA	NA	NA	NA
AXB75478.1\|450961_451567_-	secretion activating protein	A0A2P1JUY7	Xanthomonas_phage	6.1e-43	48.7
AXB75479.1\|451570_451915_-	hypothetical protein	NA	NA	NA	NA
AXB75480.1\|451918_452149_-\|tail	phage tail protein	K4PAW7	Burkholderia_phage	8.5e-06	42.0
AXB75481.1\|452148_452631_-\|head	head completion/stabilization protein	E5E3S2	Burkholderia_phage	1.0e-32	51.9
AXB75482.1\|452757_453558_-\|terminase	terminase	E5E3W7	Burkholderia_phage	3.3e-28	41.5
AXB75483.1\|453608_454721_-\|capsid	phage major capsid protein, P2 family	A0A2H4JCR7	uncultured_Caudovirales_phage	3.2e-82	47.4
AXB75484.1\|454787_455642_-\|capsid	capsid scaffolding protein	A0A2H4J928	uncultured_Caudovirales_phage	1.5e-47	43.3
AXB75485.1\|455823_457683_+	oxidoreductase	E5FFI8	Burkholderia_phage	2.6e-169	52.1
AXB75486.1\|457679_458738_+\|portal	phage portal protein	A0A1S6KZW5	Salmonella_phage	2.9e-101	56.5
AXB77973.1\|458792_459056_-	hypothetical protein	NA	NA	NA	NA
AXB75487.1\|459117_459357_-	hypothetical protein	NA	NA	NA	NA
AXB75488.1\|460388_461396_+	hypothetical protein	NA	NA	NA	NA
AXB75489.1\|461686_461941_-	ATP-binding protein	NA	NA	NA	NA
461532:461570	attR	NA	NA	NA	NA
AXB75490.1\|462229_464557_+	TonB-dependent siderophore receptor	NA	NA	NA	NA
AXB77974.1\|465285_466593_+	hypothetical protein	NA	NA	NA	NA
AXB75491.1\|466939_467932_-	L-histidine N(alpha)-methyltransferase	NA	NA	NA	NA
AXB75492.1\|467934_469212_-	ergothioneine biosynthesis protein EgtB	NA	NA	NA	NA
AXB75493.1\|469445_470135_-	DUF1275 domain-containing protein	NA	NA	NA	NA
AXB77975.1\|470233_471589_-	hypothetical protein	NA	NA	NA	NA
AXB75494.1\|471608_472037_-	DoxX family protein	NA	NA	NA	NA
AXB75495.1\|472040_472946_-	glyoxalase	NA	NA	NA	NA
AXB75496.1\|473111_474956_-	amidohydrolase	NA	NA	NA	NA
AXB75497.1\|475051_475324_-	DUF1427 family protein	NA	NA	NA	NA
AXB75498.1\|475517_476354_-	alpha/beta hydrolase	NA	NA	NA	NA
AXB75499.1\|476609_477281_-	hydrolase	NA	NA	NA	NA
AXB75500.1\|477922_479155_+	DUF4102 domain-containing protein	B7SYF8	Stenotrophomonas_phage	2.7e-90	46.5
AXB75501.1\|479559_479742_+	hypothetical protein	NA	NA	NA	NA
AXB75502.1\|479841_480069_-	DUF3072 domain-containing protein	NA	NA	NA	NA
AXB75503.1\|480436_480799_+	PRC-barrel domain containing protein	NA	NA	NA	NA
AXB75504.1\|481886_482204_+	YHYH domain-containing protein	NA	NA	NA	NA
AXB75505.1\|482462_482711_+	XRE family transcriptional regulator	NA	NA	NA	NA
AXB75506.1\|482714_484049_+	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA
AXB75507.1\|484276_484468_-	hypothetical protein	NA	NA	NA	NA
AXB75508.1\|484612_484825_-	hypothetical protein	NA	NA	NA	NA
AXB75509.1\|484825_485413_-	hypothetical protein	NA	NA	NA	NA
AXB75510.1\|485782_487609_+\|protease	ATP-dependent Clp protease ATP-binding subunit	A0A2L0V0F4	Agrobacterium_phage	9.1e-42	30.8

DBSCAN-SWA_2

3294647 : 3332777

Pseudomonas_phage(18.18%)

capsid,portal,protease,tail,tRNA,head

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXB77787.1\|3294647_3295361_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
AXB77788.1\|3295456_3295774_+	hypothetical protein	NA	NA	NA	NA
AXB77789.1\|3295913_3296678_+	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA
AXB77790.1\|3296985_3297462_+	crossover junction endodeoxyribonuclease RuvC	NA	NA	NA	NA
AXB77791.1\|3297602_3299363_+	sodium:proton exchanger	NA	NA	NA	NA
AXB77792.1\|3299387_3299783_-	acyl-CoA thioesterase	NA	NA	NA	NA
AXB77793.1\|3299779_3301870_-	S9 family peptidase	NA	NA	NA	NA
AXB78270.1\|3301918_3303733_+	aminopeptidase P family protein	A0A0P0I8D7	Acinetobacter_phage	1.8e-90	38.2
AXB77794.1\|3303734_3304136_+	cupin domain-containing protein	NA	NA	NA	NA
AXB77795.1\|3304333_3305050_+	hypothetical protein	NA	NA	NA	NA
AXB77796.1\|3305079_3305835_+	DNA-binding response regulator	W8CYM9	Bacillus_phage	2.0e-27	31.3
AXB77797.1\|3305834_3307277_+	two-component sensor histidine kinase	A0A1B0VMK3	Pseudomonas_phage	2.9e-06	27.2
AXB77798.1\|3307320_3308919_-	DUF853 family protein	A0A248XCZ8	Klebsiella_phage	4.1e-78	43.1
AXB77799.1\|3309033_3310863_+	aminodeoxychorismate synthase component I	S4VT78	Pandoravirus	3.7e-67	37.2
AXB77800.1\|3310862_3312029_+	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA
AXB77801.1\|3312137_3312833_+	RluA family pseudouridine synthase	NA	NA	NA	NA
AXB77802.1\|3312825_3313233_+\|tRNA	aminoacyl-tRNA hydrolase	NA	NA	NA	NA
AXB77803.1\|3313236_3313446_-	hypothetical protein	NA	NA	NA	NA
AXB77804.1\|3313484_3313874_-	DUF4112 domain-containing protein	NA	NA	NA	NA
AXB77805.1\|3313959_3315456_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AXB77806.1\|3315522_3315888_-	PilZ domain-containing protein	NA	NA	NA	NA
AXB78271.1\|3316052_3316511_-	RNA polymerase-binding protein DksA	NA	NA	NA	NA
AXB77807.1\|3316808_3317147_+	hypothetical protein	NA	NA	NA	NA
AXB77808.1\|3317165_3318323_-	N-acetyltransferase	NA	NA	NA	NA
AXB77809.1\|3318319_3319114_-	glycerophosphodiester phosphodiesterase	NA	NA	NA	NA
AXB77810.1\|3319094_3319559_-	RidA family protein	NA	NA	NA	NA
AXB77811.1\|3319563_3320211_-	HAD family hydrolase	NA	NA	NA	NA
AXB78272.1\|3320207_3320441_-	DUF3572 family protein	NA	NA	NA	NA
AXB77812.1\|3320577_3320940_+	response regulator	Q6XM27	Feldmannia_irregularis_virus	3.5e-06	31.1
AXB77813.1\|3321029_3321269_+	acyl carrier protein	NA	NA	NA	NA
AXB77814.1\|3321276_3322530_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	D2TEZ5	Emiliania_huxleyi_virus	8.8e-36	30.0
AXB77815.1\|3322532_3323378_+	GDSL family lipase	NA	NA	NA	NA
AXB78273.1\|3323378_3323933_-	NADPH-dependent oxidoreductase	NA	NA	NA	NA
AXB77816.1\|3324049_3324370_-	protein usg	NA	NA	NA	NA
AXB77817.1\|3324520_3325159_-	DedA family protein	NA	NA	NA	NA
AXB77818.1\|3325398_3325908_+	hypothetical protein	NA	NA	NA	NA
AXB77819.1\|3325897_3327223_+	ATP-binding protein	A0A1V0DY66	Dinoroseobacter_phage	8.0e-80	43.7
AXB77820.1\|3327279_3328443_+\|portal	phage portal protein	W8ECU7	Geobacillus_phage	2.0e-42	33.4
AXB77821.1\|3328439_3328748_+	hypothetical protein	NA	NA	NA	NA
AXB77822.1\|3328744_3329167_+\|head,protease	HK97 family phage prohead protease	A0A0U2BX10	Paracoccus_phage	9.2e-14	39.5
AXB77823.1\|3329214_3330354_+\|capsid	phage major capsid protein	A0A2D1GNH4	Pseudomonas_phage	1.3e-78	44.9
AXB77824.1\|3330577_3331138_+	hypothetical protein	NA	NA	NA	NA
AXB77825.1\|3331302_3331692_+	DUF3168 domain-containing protein	NA	NA	NA	NA
AXB77826.1\|3331849_3332257_+\|tail	phage major tail protein, TP901-1 family	NA	NA	NA	NA
AXB77827.1\|3332253_3332580_+	gene transfer agent family protein	NA	NA	NA	NA
AXB77828.1\|3332576_3332777_+\|tail	phage tail assembly chaperone	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

4. CP030353

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

784182 : 858515

Ralstonia_phage(28.57%)

transposase,integrase,holin

attL 787113:787126|attR 858628:858641

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXB78851.1\|784182_785245_+\|transposase	IS630 family transposase	NA	NA	NA	NA
AXB78852.1\|785727_786555_-	CoA ester lyase	NA	NA	NA	NA
AXB78853.1\|786575_787730_-	isovaleryl-CoA dehydrogenase	NA	NA	NA	NA
787113:787126	attL	NA	NA	NA	NA
AXB78854.1\|787813_788695_+	LysR family transcriptional regulator	NA	NA	NA	NA
AXB78855.1\|788691_790089_-	dihydrolipoyl dehydrogenase	NA	NA	NA	NA
AXB78856.1\|790094_791411_-	2-oxo acid dehydrogenase subunit E2	NA	NA	NA	NA
AXB78857.1\|791410_792427_-	alpha-ketoacid dehydrogenase subunit beta	NA	NA	NA	NA
AXB78858.1\|792428_793658_-	3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) subunit alpha	NA	NA	NA	NA
AXB78859.1\|793769_794264_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
AXB78860.1\|796168_796435_-	hypothetical protein	NA	NA	NA	NA
AXB79892.1\|796578_797964_-	dihydrolipoyl dehydrogenase	A0A2K5B2C5	Erysipelothrix_phage	9.1e-34	25.3
AXB78861.1\|797966_799607_-	2-oxo acid dehydrogenase subunit E2	NA	NA	NA	NA
AXB78862.1\|799608_800622_-	alpha-ketoacid dehydrogenase subunit beta	NA	NA	NA	NA
AXB78863.1\|800624_801860_-	3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) subunit alpha	NA	NA	NA	NA
AXB78864.1\|801926_802295_-	nuclear transport factor 2 family protein	NA	NA	NA	NA
AXB78865.1\|802291_803335_-	Glu/Leu/Phe/Val dehydrogenase	NA	NA	NA	NA
AXB78866.1\|803447_803942_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
AXB78867.1\|804414_804789_-	VOC family protein	NA	NA	NA	NA
AXB78868.1\|804945_805539_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AXB78869.1\|805731_807531_-	hydantoinase B/oxoprolinase family protein	NA	NA	NA	NA
AXB78870.1\|807527_809630_-	hydantoinase/oxoprolinase family protein	NA	NA	NA	NA
AXB78871.1\|809921_811004_+	alanine racemase	NA	NA	NA	NA
AXB78872.1\|811065_813294_+	TonB-dependent receptor	NA	NA	NA	NA
AXB78873.1\|813354_814893_+	MFS transporter	NA	NA	NA	NA
AXB78874.1\|814945_816268_+	histidinol dehydrogenase	NA	NA	NA	NA
AXB78875.1\|816269_817034_+	SDR family NAD(P)-dependent oxidoreductase	A0A1E1ETD6	Acanthamoeba_castellanii_mimivirus	6.8e-07	31.0
AXB78876.1\|817011_817788_+	cysteine hydrolase	NA	NA	NA	NA
AXB78877.1\|817967_819056_+	branched-chain amino acid aminotransferase	NA	NA	NA	NA
AXB78878.1\|819166_820519_-\|transposase	DDE transposase	NA	NA	NA	NA
AXB78879.1\|822374_824705_-	TonB-dependent receptor	NA	NA	NA	NA
AXB78880.1\|824824_825658_-	AraC family transcriptional regulator	NA	NA	NA	NA
AXB79893.1\|825952_826597_+	XRE family transcriptional regulator	NA	NA	NA	NA
AXB78881.1\|826636_827770_-	hypothetical protein	NA	NA	NA	NA
AXB78882.1\|827988_829620_+\|holin	glucose-methanol-choline oxidoreductase	A0A1V0S9M4	Catovirus	1.8e-44	29.9
AXB78883.1\|829707_830745_-	hypothetical protein	NA	NA	NA	NA
AXB78884.1\|830784_832122_-	MFS transporter	NA	NA	NA	NA
AXB78885.1\|832134_832488_-	RidA family protein	NA	NA	NA	NA
AXB78886.1\|832484_833975_-	microcystin LR degradation protein MlrC-like protein	NA	NA	NA	NA
AXB78887.1\|833990_835154_-	FAD-binding oxidoreductase	NA	NA	NA	NA
AXB78888.1\|835388_836888_+	aldehyde dehydrogenase family protein	NA	NA	NA	NA
AXB78889.1\|836964_839028_-	serine hydrolase	NA	NA	NA	NA
AXB78890.1\|838961_840248_-	hypothetical protein	NA	NA	NA	NA
AXB78891.1\|840244_841921_-	hypothetical protein	A0A2I2MPE5	Mycobacterium_phage	6.1e-08	24.4
AXB78892.1\|842431_843400_+	agmatinase	NA	NA	NA	NA
AXB78893.1\|843432_844608_-	hypothetical protein	NA	NA	NA	NA
AXB78894.1\|847088_848405_-	4-aminobutyrate--2-oxoglutarate transaminase	A0A1V0SKB7	Klosneuvirus	7.8e-27	30.5
AXB78895.1\|848541_849549_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AXB78896.1\|849876_850182_+	hypothetical protein	NA	NA	NA	NA
AXB78897.1\|850138_851080_-	AraC family transcriptional regulator	NA	NA	NA	NA
AXB78898.1\|851176_852382_+	MFS transporter	NA	NA	NA	NA
AXB79894.1\|852819_853854_+\|transposase	IS110 family transposase	NA	NA	NA	NA
AXB79895.1\|856149_857322_+	DUF4102 domain-containing protein	A0A221SAN4	Ralstonia_phage	6.9e-43	32.5
AXB78899.1\|857318_858515_+\|integrase	site-specific integrase	A0A221SAN4	Ralstonia_phage	8.7e-33	30.2
858628:858641	attR	NA	NA	NA	NA

DBSCAN-SWA_2

1140738 : 1205807

Pseudomonas_phage(14.29%)

transposase,integrase

attL 1152607:1152625|attR 1213182:1213200

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXB79075.1\|1140738_1141684_+\|transposase	IS630 family transposase	NA	NA	NA	NA
AXB79076.1\|1141748_1142192_+	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA
AXB79077.1\|1142857_1143121_+	hypothetical protein	NA	NA	NA	NA
AXB79078.1\|1143120_1143339_+	hypothetical protein	NA	NA	NA	NA
AXB79079.1\|1143415_1144576_+	winged helix-turn-helix domain-containing protein	NA	NA	NA	NA
AXB79080.1\|1145439_1146126_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
AXB79081.1\|1146119_1147076_+	iron dicitrate transport regulator FecR	NA	NA	NA	NA
AXB79082.1\|1147182_1150227_+	TonB-dependent receptor	NA	NA	NA	NA
AXB79083.1\|1150314_1151289_+	alpha/beta hydrolase	NA	NA	NA	NA
AXB79084.1\|1151285_1152383_+	pectin esterase	NA	NA	NA	NA
1152607:1152625	attL	NA	NA	NA	NA
AXB79085.1\|1152803_1153256_-	PaaI family thioesterase	NA	NA	NA	NA
AXB79086.1\|1153252_1153819_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AXB79087.1\|1154677_1156000_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	4.4e-30	31.4
AXB79088.1\|1156639_1156843_+	hypothetical protein	NA	NA	NA	NA
AXB79089.1\|1156960_1158115_-	hypothetical protein	NA	NA	NA	NA
AXB79090.1\|1158287_1158500_-	hypothetical protein	NA	NA	NA	NA
AXB79091.1\|1158477_1159245_-	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA
AXB79917.1\|1159613_1161710_+	catalase HPII	A0A2K9L0T1	Tupanvirus	2.5e-136	48.5
AXB79916.1\|1161798_1162929_+	glycosyltransferase family 4 protein	NA	NA	NA	NA
AXB79092.1\|1162921_1163872_+	glycosyltransferase	NA	NA	NA	NA
AXB79093.1\|1163868_1164912_+	glycosyltransferase	NA	NA	NA	NA
AXB79094.1\|1164857_1166039_+	acyl-CoA dehydrogenase	NA	NA	NA	NA
AXB79095.1\|1166038_1166713_+	PIG-L family deacetylase	NA	NA	NA	NA
AXB79096.1\|1166709_1167303_+	methyltransferase	NA	NA	NA	NA
AXB79097.1\|1167278_1168139_+	glycosyltransferase	NA	NA	NA	NA
AXB79918.1\|1168190_1168370_-	hypothetical protein	NA	NA	NA	NA
AXB79098.1\|1168613_1168877_-	DksA/TraR family C4-type zinc finger protein	E5E4B1	Acinetobacter_phage	8.5e-10	43.2
AXB79099.1\|1169229_1169760_+	PRC-barrel domain containing protein	NA	NA	NA	NA
AXB79100.1\|1169834_1170929_+	catalase	NA	NA	NA	NA
AXB79919.1\|1173454_1174639_-	DUF2252 domain-containing protein	NA	NA	NA	NA
AXB79920.1\|1175079_1175973_+	diacylglycerol kinase	NA	NA	NA	NA
AXB79101.1\|1175969_1176803_+	inositol monophosphatase	NA	NA	NA	NA
AXB79102.1\|1177490_1178024_+	hypothetical protein	J3E6X6	Acanthamoeba_polyphaga_lentillevirus	3.0e-09	29.8
AXB79103.1\|1178639_1179368_+	EAL domain-containing protein	NA	NA	NA	NA
AXB79921.1\|1179860_1180277_-	response regulator	NA	NA	NA	NA
AXB79104.1\|1180551_1181439_+	hypothetical protein	NA	NA	NA	NA
AXB79105.1\|1181408_1182455_+	sel1 repeat family protein	NA	NA	NA	NA
AXB79106.1\|1182361_1183714_-\|transposase	DDE transposase	NA	NA	NA	NA
AXB79107.1\|1183909_1185151_+	sel1 repeat family protein	NA	NA	NA	NA
AXB79108.1\|1185501_1185813_+	hypothetical protein	NA	NA	NA	NA
AXB79109.1\|1185872_1186796_+	iron-containing redox enzyme family protein	NA	NA	NA	NA
AXB79110.1\|1186992_1187559_+	hypothetical protein	NA	NA	NA	NA
AXB79111.1\|1187595_1188957_+	AarF/ABC1/UbiB kinase family protein	A0A0P0CRP3	Ostreococcus_lucimarinus_virus	2.5e-20	27.0
AXB79112.1\|1189323_1189548_-	DUF3253 domain-containing protein	NA	NA	NA	NA
AXB79922.1\|1189586_1190627_-	YihY/virulence factor BrkB family protein	NA	NA	NA	NA
AXB79113.1\|1192646_1193663_-\|transposase	IS110 family transposase	NA	NA	NA	NA
AXB79114.1\|1193856_1194828_-	MucR-family transcriptional regulator	A0A1P8VVG0	Erythrobacter_phage	1.5e-22	48.4
AXB79115.1\|1195110_1195362_+	hypothetical protein	NA	NA	NA	NA
AXB79116.1\|1195547_1196837_+	sodium:proton antiporter	NA	NA	NA	NA
AXB79117.1\|1197430_1197721_+	hypothetical protein	NA	NA	NA	NA
AXB79118.1\|1197953_1198814_+	transglutaminase family protein	NA	NA	NA	NA
AXB79119.1\|1199030_1199609_+	hypothetical protein	NA	NA	NA	NA
AXB79120.1\|1200014_1201874_+	response regulator	W8CYM9	Bacillus_phage	2.4e-05	30.5
AXB79121.1\|1201901_1203053_-\|integrase	integrase	NA	NA	NA	NA
AXB79122.1\|1203231_1204887_+\|integrase	integrase	NA	NA	NA	NA
AXB79123.1\|1204883_1205807_+\|transposase	transposase	NA	NA	NA	NA
1213182:1213200	attR	NA	NA	NA	NA

DBSCAN-SWA_3

1209884 : 1254652

Staphylococcus_phage(33.33%)

transposase,integrase

attL 1231320:1231336|attR 1268016:1268032

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXB79130.1\|1209884_1210901_-\|transposase	IS110 family transposase	A0A1S7J231	Thermus_phage	8.7e-18	27.1
AXB79131.1\|1212494_1212716_+	hypothetical protein	NA	NA	NA	NA
AXB79132.1\|1212721_1213069_+	hypothetical protein	NA	NA	NA	NA
AXB79133.1\|1213213_1214374_-\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	1.7e-38	35.1
AXB79134.1\|1216079_1216529_+	hypothetical protein	NA	NA	NA	NA
AXB79135.1\|1216512_1216872_-	integration host factor subunit alpha	NA	NA	NA	NA
AXB79136.1\|1217262_1217841_+	hypothetical protein	NA	NA	NA	NA
AXB79137.1\|1217842_1218109_-	hypothetical protein	NA	NA	NA	NA
AXB79138.1\|1220074_1220428_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
AXB79139.1\|1220424_1220868_-	hypothetical protein	NA	NA	NA	NA
AXB79140.1\|1221211_1222372_+\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	7.8e-39	35.4
AXB79141.1\|1224496_1224916_+	flavin reductase	NA	NA	NA	NA
AXB79142.1\|1225436_1225616_+	hypothetical protein	NA	NA	NA	NA
AXB79143.1\|1226406_1226655_-	hypothetical protein	NA	NA	NA	NA
AXB79144.1\|1227079_1227376_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
AXB79923.1\|1227447_1228248_-	type 1 glutamine amidotransferase domain-containing protein	NA	NA	NA	NA
AXB79145.1\|1229686_1230751_-	glycosyltransferase family 4 protein	NA	NA	NA	NA
AXB79146.1\|1230752_1232357_-	DUF3459 domain-containing protein	NA	NA	NA	NA
1231320:1231336	attL	NA	NA	NA	NA
AXB79147.1\|1232957_1233158_+	hypothetical protein	NA	NA	NA	NA
AXB79148.1\|1233164_1235456_+	glycosyltransferase	NA	NA	NA	NA
AXB79149.1\|1236520_1236724_-	hypothetical protein	NA	NA	NA	NA
AXB79150.1\|1237013_1238242_-\|transposase	IS3 family transposase	Q8W6R2	Burkholderia_virus	2.8e-103	68.0
AXB79151.1\|1238295_1239330_+\|transposase	IS110 family transposase	NA	NA	NA	NA
AXB79152.1\|1240131_1241302_+\|transposase	IS3 family transposase	NA	NA	NA	NA
AXB79153.1\|1241596_1241785_+	hypothetical protein	NA	NA	NA	NA
AXB79154.1\|1241891_1243103_-\|integrase	integrase	NA	NA	NA	NA
AXB79155.1\|1243385_1246277_-	Ti-type conjugative transfer relaxase TraA	NA	NA	NA	NA
AXB79156.1\|1246449_1246788_+	conjugal transfer protein TraD	NA	NA	NA	NA
AXB79157.1\|1246804_1247065_+	conjugal transfer protein TraD	NA	NA	NA	NA
AXB79158.1\|1247057_1247864_-	hypothetical protein	NA	NA	NA	NA
AXB79159.1\|1248078_1248426_+	hypothetical protein	NA	NA	NA	NA
AXB79160.1\|1248481_1248928_-	hypothetical protein	NA	NA	NA	NA
AXB79161.1\|1248822_1250000_-\|transposase	IS3 family transposase	NA	NA	NA	NA
AXB79162.1\|1250060_1250306_-	hypothetical protein	NA	NA	NA	NA
AXB79163.1\|1250315_1251242_-	HEPN domain-containing protein	NA	NA	NA	NA
AXB79164.1\|1251302_1251548_-	hypothetical protein	NA	NA	NA	NA
AXB79165.1\|1251544_1252426_-	antirestriction protein ArdC	A0A1V0EBY3	Caulobacter_phage	2.9e-46	42.8
AXB79924.1\|1252997_1253210_+	AlpA family transcriptional regulator	NA	NA	NA	NA
AXB79166.1\|1253275_1254652_-\|integrase	integrase	Q7M297	Enterobacteria_phage	2.6e-73	37.7
1268016:1268032	attR	NA	NA	NA	NA

DBSCAN-SWA_4

1761196 : 1767642

Acinetobacter_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXB79489.1\|1761196_1761781_+	TerD family protein	A0A2I7QY07	Vibrio_phage	3.8e-18	33.9
AXB79490.1\|1761830_1763009_+	universal stress protein	NA	NA	NA	NA
AXB79491.1\|1763036_1764092_+	DUF475 domain-containing protein	A0A172Q0Y5	Acinetobacter_phage	2.3e-69	43.2
AXB79492.1\|1764138_1764717_+	TerD family protein	A0A0S4KZ16	Pseudomonas_phage	1.6e-13	32.8
AXB79493.1\|1764741_1765317_+	TerD family protein	K4JRX3	Caulobacter_phage	6.6e-31	43.3
AXB79494.1\|1765339_1766530_+	hypothetical protein	A0A1B1IRH0	uncultured_Mediterranean_phage	4.7e-15	36.0
AXB79495.1\|1766523_1767642_+	hypothetical protein	A0A172Q0Y1	Acinetobacter_phage	2.5e-26	27.1

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP030355

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. CP030354

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. CP030352

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

4. CP030353

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection