CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP007216	Salmonella enterica subsp. enterica serovar Newport str. USDA-ARS-USMARC-1927, complete genome	2 crisprs	cas3,PD-DExK,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,DEDDh,DinG	0	16	8	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP007216_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP007216_2

975001-975639

TypeI-E

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAACCG	PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRT

10 spacers

cas3,cas8e

The CRISPR arrays of CP007216_2

>merge|CP007216|2|975001-975639|PILER-CR,CRISPRCasFinder,CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCGTTGCGTATTTCGATTGTCTGGACATTTCGTACGTGTTCCCCGCGCCAGCGGGGATAAACCGTGCTTCCTGCTGATTTTCTGCGTCTACTGGATGTGTTCCCCGCGCCAGCGGGGATAAACCGCGTCAGCGCGGTATTGAGGCCGGGGACCGCCCGTGTTCCCCGCGCCAGCGGGGATAAACCGAACAGGAACAGGAAAAAAAAGATTTGTCCGGTGTGTTCCCCGCGCCAGCGGGGATAAACCGACGTTTTAACAGGGTAATATTTACTTAATTATGTGTTCCCCGCGCCAGCGGGGATAAACCGGTTACTTTATTATCTCTCGCATAGACCCGGCAGTGTTCCCCGCGCCAGCGGGGATAAACCGCGGTCATTTTAAAGAATCCCGTTAAACAACACGTGTTCCCCGCGCCAGCGGGGATAAACCGCAGGTTATGCGCAAAAATTAATTCATATTATAGTGTTCCCCGCGCCAGCAGGGATAAACCGGACGAGTTCTGGAAATGGTTAGCTGATAAAGAGTGTTCCCCGCGCCAGCGGGGATAAACCGCGTTCATCGGCAGCGTCACGCAATATGAAGATGTGTTCCCCGCGCCAACAAGGATAGCCGT

>CP007216|2|1|975001-975578|PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGCGTATTTCGATTGTCTGGACATTTCGTAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGCTTCCTGCTGATTTTCTGCGTCTACTGGAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTCAGCGCGGTATTGAGGCCGGGGACCGCCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AACAGGAACAGGAAAAAAAAGATTTGTCCGGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACGTTTTAACAGGGTAATATTTACTTAATTAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTTACTTTATTATCTCTCGCATAGACCCGGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGGTCATTTTAAAGAATCCCGTTAAACAACAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGGTTATGCGCAAAAATTAATTCATATTATA
GTGTTCCCCGCGCCAGCAGGGATAAACCG	GACGAGTTCTGGAAATGGTTAGCTGATAAAGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG

>CP007216|2|2|975001-975639|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGCGTATTTCGATTGTCTGGACATTTCGTAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGCTTCCTGCTGATTTTCTGCGTCTACTGGAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTCAGCGCGGTATTGAGGCCGGGGACCGCCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AACAGGAACAGGAAAAAAAAGATTTGTCCGGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACGTTTTAACAGGGTAATATTTACTTAATTAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTTACTTTATTATCTCTCGCATAGACCCGGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGGTCATTTTAAAGAATCCCGTTAAACAACAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGGTTATGCGCAAAAATTAATTCATATTATA
GTGTTCCCCGCGCCAGCAGGGATAAACCG	GACGAGTTCTGGAAATGGTTAGCTGATAAAGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTTCATCGGCAGCGTCACGCAATATGAAGAT
GTGTTCCCCGCGCCAACAAGGATAGCCGT

>CP007216|2|1|975001-975639|CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGCGTATTTCGATTGTCTGGACATTTCGTAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGCTTCCTGCTGATTTTCTGCGTCTACTGGAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTCAGCGCGGTATTGAGGCCGGGGACCGCCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AACAGGAACAGGAAAAAAAAGATTTGTCCGGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACGTTTTAACAGGGTAATATTTACTTAATTAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTTACTTTATTATCTCTCGCATAGACCCGGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGGTCATTTTAAAGAATCCCGTTAAACAACAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGGTTATGCGCAAAAATTAATTCATATTATA
GTGTTCCCCGCGCCAGCAGGGATAAACCG	GACGAGTTCTGGAAATGGTTAGCTGATAAAGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTTCATCGGCAGCGTCACGCAATATGAAGAT
GTGTTCCCCGCGCCAACAAGGATAGCCGT

Protein	Signature genes	Signature genes Name	Protein_function
CP007216.2\|AJQ70959.1\|970878_972516_+\|CTP-synthetase	unknown	unknown	gnl\|CDD\|235437
CP007216.2\|AJQ70958.1\|972598_973897_+\|enolase	unknown	unknown	gnl\|CDD\|234617
CP007216.2\|AJQ70961.2\|968786_969083_+\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	unknown	unknown	gnl\|CDD\|226194
CP007216.2\|AJQ70957.1\|974032_974704_+\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126
CP007216.2\|AJQ70949.2\|981941_982895_-\|SPI-1-type-III-secretion-system-effector-SopD	unknown	unknown	gnl\|CDD\|185277
CP007216.2\|AJQ70952.2\|977407_979207_+\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	unknown	unknown	gnl\|CDD\|182862
CP007216.2\|AWH56052.1\|981617_981860_-\|hypothetical-protein	unknown	unknown	unknown
CP007216.2\|AJQ70964.1\|964799_966095_+\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	unknown	unknown	gnl\|CDD\|237291
CP007216.2\|AJQ70951.1\|979206_980919_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	unknown	unknown	gnl\|CDD\|237402
CP007216.2\|AWH56322.1\|976912_977083_+\|6-pyruvoyl-tetrahydrobiopterin-synthase	unknown	unknown	unknown
CP007216.2\|AJQ70953.1\|976621_976984_-\|6-carboxytetrahydropterin-synthase-QueD	unknown	unknown	gnl\|CDD\|238264
CP007216.2\|AJQ70947.2\|983338_986002_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
CP007216.2\|AJQ70950.1\|980994_981729_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
CP007216.2\|AJQ70966.2\|960799_961942_+\|glycerate-kinase	unknown	unknown	gnl\|CDD\|224840
CP007216.2\|AJQ70946.1\|986013_987573_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
CP007216.2\|AJQ70963.1\|966146_968381_+\|GTP-diphosphokinase	unknown	unknown	gnl\|CDD\|182797
CP007216.2\|AJQ70960.2\|969850_970651_+\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
CP007216.2\|AJQ70954.2\|975736_976534_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|224158
CP007216.2\|AJQ70962.2\|968464_968821_+\|type-II-toxin-antitoxin-system-ParD-family-antitoxin	unknown	unknown	gnl\|CDD\|226136
CP007216.2\|AJQ70965.1\|961985_964742_-\|two-component-sensor-histidine-kinase-BarA	unknown	unknown	gnl\|CDD\|236848

Protein	Function_ID	Function_description	E-value
CP007216.2\|AJQ70959.1\|970878_972516_+\|CTP-synthetase	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
CP007216.2\|AJQ70958.1\|972598_973897_+\|enolase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
CP007216.2\|AJQ70961.2\|968786_969083_+\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	gnl\|CDD\|226194	COG3668, ParE, Plasmid stabilization system protein [General function prediction only].	1.63617e-13
CP007216.2\|AJQ70957.1\|974032_974704_+\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	1.43874e-155
CP007216.2\|AJQ70949.2\|981941_982895_-\|SPI-1-type-III-secretion-system-effector-SopD	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
CP007216.2\|AJQ70952.2\|977407_979207_+\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	gnl\|CDD\|182862	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit.	0
CP007216.2\|AJQ70964.1\|964799_966095_+\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	gnl\|CDD\|237291	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD.	0
CP007216.2\|AJQ70951.1\|979206_980919_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0
CP007216.2\|AJQ70953.1\|976621_976984_-\|6-carboxytetrahydropterin-synthase-QueD	gnl\|CDD\|238264	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS). Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids, as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is PTPS which catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin. The functional enzyme is a hexamer of identical subunits.	2.78454e-58
CP007216.2\|AJQ70947.2\|983338_986002_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	0
CP007216.2\|AJQ70950.1\|980994_981729_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	1.61797e-139
CP007216.2\|AJQ70966.2\|960799_961942_+\|glycerate-kinase	gnl\|CDD\|224840	COG1929, COG1929, Glycerate kinase [Carbohydrate transport and metabolism].	0
CP007216.2\|AJQ70946.1\|986013_987573_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	5.17383e-173
CP007216.2\|AJQ70963.1\|966146_968381_+\|GTP-diphosphokinase	gnl\|CDD\|182797	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional.	0
CP007216.2\|AJQ70960.2\|969850_970651_+\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	8.52469e-158
CP007216.2\|AJQ70954.2\|975736_976534_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|224158	COG1237, COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only].	5.39566e-102
CP007216.2\|AJQ70962.2\|968464_968821_+\|type-II-toxin-antitoxin-system-ParD-family-antitoxin	gnl\|CDD\|226136	COG3609, COG3609, Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain [Transcription].	6.12601e-20
CP007216.2\|AJQ70965.1\|961985_964742_-\|two-component-sensor-histidine-kinase-BarA	gnl\|CDD\|236848	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional.	0

>CP007216.2|AJQ70957.1|974032_974704_+|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWDKLSDREVSLFSILAKTKESDKWGAASSEDLLAVINRQGYTARHVVITGGEPCIHDLMPLTDLLEKSGFSCQIETSGTHEVRCTPNTWVTVSPKVNMRGGYDVLSQALERANEIKHPVGRVRDIEALDELLATLSDDKPRVIALQPISQKEDATRLCIETCIARNWRLSMQTHKYLNIA
>CP007216.2|AJQ70958.1|972598_973897_+|enolase
MSKIVKVIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVGAVNGPIAQAILGKDAKDQAGIDKIMIDLDGTENKSNFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKGKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>CP007216.2|AJQ70959.1|970878_972516_+|CTP-synthetase
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQLAVDIGREHALFMHLTLVPYLAAAGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISMKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIYEEANPAGEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVTVNIKLIDSQDVETRGVEILKDLDAILIPGGFGYRGVEGKIATARYARENNIPYLGICLGMQVALIEFARNVAGMDNANSTEFVPDCKYPVVALITEWRDEDGNVEVRSEKSDLGGTMRLGAQQCQLSDDSLVRQLYGASTIVERHRHRYEVNNMLLKQIEAAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAANEHQKRQAK
>CP007216.2|AJQ70960.2|969850_970651_+|nucleoside-triphosphate-pyrophosphohydrolase
MTTNHQIDRLLTLMQRLRDPENGCPWDKEQTFASIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFGELSADNSEEALVRWEQIKTEERAQKAQHSALDDIPRSFPALMRAQKIQKRCSNVGFDWTTLGPVVDKVYEEIDEVMFEARQAVVDQAKLEEEMGDLLFATVNMARHLGTKAELALQKANDKFERRFREVERIVAARGLEMTGVDLETMEEVWQEVKRQEIDL
>CP007216.2|AJQ70961.2|968786_969083_+|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin
MRMVKLTPKASEDLENIWHYGWQHFGEIQADRYINHLSEIFSIMSANNIGTPRPELGEYIYALPFKRHIIYFIQSVTEVIVIRILSQNQDAGKHVNWL
>CP007216.2|AJQ70962.2|968464_968821_+|type-II-toxin-antitoxin-system-ParD-family-antitoxin
MFLTYISFPVYSYVRFILTVEAVMARTMTVDLGDELREFIESLIESGDYRTQSEVIRESLRLLREKQAESRLQALRELLAEGLNSGEPQAWEKDAFLRKVKTGMIKPDENGKINAKGQ
>CP007216.2|AJQ70963.1|966146_968381_+|GTP-diphosphokinase
MVAVRSAHINKAGEFDPKKWIASLGISSQQSCERLAETWAYCLQQTQGHPDADLLLWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKSIVTLIHGVRDMAAIRQLNATHNDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKEAPEDERVLAAKECTNIYAPLANRLGIGQLKWELEDYCFRYLHPAEYKRIAKLLHERRLDREHYIEEFVGHLRAEMKNEGVQAEVYGRPKHIYSIWRKMQKKHLAFDELFDVRAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTVEIQIRTKQMHEDAELGVAAHWKYKEGAASGGVRSGHEDRIAWLRKLIAWQEEMADSGEMLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVPFTYQLQMGDQIEIITQKQPNPSRDWLNPNLGYVTTSRGRSKIHAWFRKQDRDKNIQAGRQILDDELAHLGISLKEAEKHLLPRYNFNELEELLAAIGGGDIRLNQMVNFLQSQFNKPSAEEQDAAALKQLQQKTYAPQNRRKDDGRVVVEGVGNLMHHIARCCQPIPGDEIVGFITQGRGISVHRADCEQLAELRSHAPERIVEAVWGESYSAGYSLVVRVQANDRSGLLRDITTILANEKVNVLGVASRSDIKQQIATIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLHGG
>CP007216.2|AJQ70964.1|964799_966095_+|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD
MAQFYSAKRRVTTRQIITVKVNDLDSFGQGVARHNGKALFIPGLLPEESAEVIITEDKKQFARARVSRRLNDSPERETPRCPHFGVCGGCQQQHVSIALQQRSKSAALARLMKHEVNDIIAGAPWGYRRRARLSLNCPPDKPLQMGFRKAGSSDIVNVEQCPVLAPQLEALLPRIRACLASLHGTRHLGHVELVQAGSGTLMILRHTAPLSAADKEKLERFSHSEGLSLFLAPFSEILETVSGEAPWYDSHGLRLAFSPRDFIQVNEAVNQQMVARALEWLDVRAEDRVLDLFCGMGNFTLPLATRAASVVGVEGVPALVEKGRENAIRNGLHNVTFFHENLEEDVTKQPWAKNGFDKVLLDPARAGATGVMRHIIKLKPIRIVYVSCNPATLARDSEALVNAGYEVTRLAMLDMFPHTGHLESMVLFERM
>CP007216.2|AJQ70965.1|961985_964742_-|two-component-sensor-histidine-kinase-BarA
MTNYSLRARMMILILAPTVLIGLLLSIFFVVHRYNDLQRQLEDAGASIIEPLAVSSEYGMNLQNRESIGQLISVLHRRHSDIVRAISVYDDHNRLFVTSNFHLDPSQMQLPAGAPFPRRLSVDRHGDIMILRTPIISESYSPDESAIADAKNTKNMLGYVALELDLKSVRLQQYKEIFISSVMMLFCIGIALIFGWRLMRDVTGPIRNMVNTVDRIRRGQLDSRVEGFMLGELDMLKNGINSMAMSLAAYHEEMQHNIDQATSDLRETLEQMEIQNVELDLAKKRAQEAARIKSEFLANMSHELRTPLNGVIGFTRLTLKTELNPTQRDHLNTIERSANNLLAIINDVLDFSKLEAGKLILESIPFPLRNTLDEVVTLLAHSSHDKGLELTLNIKNDVPDNVIGDPLRLQQVITNLVGNAIKFTESGNIDILVEKRALSNTKVQIEVQIRDTGIGIPERDQSRLFQAFRQADASISRRHGGTGLGLVITQKLVNEMGGDISFHSQPNRGSTFWFHINLDLNPNVIIDGPSTACLAGKRLAYVEPNATAAQCTLDLLSDTPVEVVYSPTFSALPLAHYDIMILSVPVTFREPLTMQHERLAKAASMTDFLLLALPCHAQINAEKLKQGGAAACLLKPLTSTRLLPALTEYCQLNHHPEPLLMDTSKITMTVMAVDDNPANLKLIGALLEDKVQHVELCDSGHQAVDRAKQMQFDLILMDIQMPDMDGIRACELIHQLPHQQQTPVIAVTAHAMAGQKEKLLSAGMNDYLAKPIEEEKLHNLLLRYKPGANVAARLMAPEPAEFIFNPNATLDWQLALRQAAGKPDLARDMLQMLIDFLPEVRNKIEEQLVGENPNGLVDLVHKLHGSCGYSGVPRMKNLCQLIEQQLRSGVHEEELEPEFLELLDEMDNVAREAKKILG
>CP007216.2|AJQ70966.2|960799_961942_+|glycerate-kinase
MKIVIAPDSYKESLSALEVATAIEQGFREIWPDADYLKLPLADGGEGTVEAMVEATVGRIVHVEVTGPLGHRVNAFYGLSGDARSAFIEMAAASGLEQVPPAQRDPLKTTSWGTGELIRHALDAGVEHIIIGIGGSATNDGGAGMVQALGARLRDAQGNDIAQGGIGLETLASIDISGLDKRLSACHIEVACDVTNPLTGKEGASAVFGPQKGATPEMIERLDTALTRYAHLIARDLHVDVLDLAGGGAAGGMGAALYAFCGAQLRRGIEIVTDALHLEACLADADLVITGEGRIDSQTIHGKVPIGVANIAKRYNKPVIGIAGSLTADVSVVHEHGLDAVFSVIYTICTLEDALKNASENVRMTARNVAATLKAGQQLR
>CP007216.2|AJQ70954.2|975736_976534_+|MBL-fold-metallo-hydrolase
MALRIRVLLENHKGAGADKSLKARPGLSLLVEDESTSILFDTGPDGSFMQNALAMGIDLSDVSAVVLSHGHYDHCGGVPWLPDNSRIICHPDIARERYAAMTFLGITRKIKKLSCEVDYSRYRMMYTRGPLPIGENFIWSGEIPVVAPEAYGIFGGHDAEPDSILDEGVLIYQSTKGLVIITGCGHRGIANIVRHCQNITGIKRIYALVGGFHLRCASPFTLWRVRRFLQEQKPEKLCGCHCTGAWGRLWLPEITAPATGDVLRF
>CP007216.2|AJQ70953.1|976621_976984_-|6-carboxytetrahydropterin-synthase-QueD
MSTTLYKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGEVDPHTGWIMDFADLKAAFKPTYDRLDHYYLNDIPGLSNPTSEVLAKWIWDQVKPVVPLLSAVMVKETCTAGCVYRGE
>CP007216.2|AWH56322.1|976912_977083_+|6-pyruvoyl-tetrahydrobiopterin-synthase
MPFRHVRQAVSGFKGEIFIQRGGHDELSGNKKTAVGYRKAHFLSLTKTILRLVTGN
>CP007216.2|AJQ70952.2|977407_979207_+|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit
MTTPAPLTGLLPLNPEQLARLQAATTDLTPEQLAWVSGYFWGVLNPRSGAVAVTPVPERKMPGVTLISASQTGNARRVAEALRDDLLAANLNVTLVNAGDYKFKQIASEKLLVIVTSTQGEGEPPEEAVALHKFLFSKKAPKLENTAFAVFSLGDTSYEFFCQSGKDFDSKLAELGGERLLDRVDADVEYQAAASEWRARVVDVLKSRAPVAAPSQSVATGAVNDIHTSPYTKDAPLAATLSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDELGVWYQNDPALVKELVELLWLKGDEPVTVDGKTLPLAEALEWHFELTVNTANIVENYATLTRSESLLPLVGDKAQLQHYAATTPIVDMVRFSPAQLDAQALIDLLRPLTPRLYSIASSQAETENEVHVTVGVVRYDIEGRARAGGASSFLADRVEEEGEVRVFIEHNDNFRLPANPQTPVIMIGPGTGIAPFRAFMQQRAAEGAEGKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLNRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCGDARRMAADVEKALLEVIAEFGGMDLESADEYLSELRVERRYQRDVY
>CP007216.2|AJQ70951.1|979206_980919_+|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit
MSEKHPGPLVVEGKLSDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAAQKLEPRHAMLLRCRLPGGVITTTQWQAIDKFAADNTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGATYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGVDTFKEEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDDKWHLTLFIENGRILDYPGRPLKTGLLEIAKIHQGEFRITANQNLIIASVPESQKAKIETLARDHGLMNAVSAQRENSMACVSFPTCPLAMAEAERFLPSFTDKVEAILEKHGIPDEHIVMRVTGCPNGCGRAMLAEIGLVGKAPGRYNLHLGGNRIGTRIPRMYQENITEPDILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDFWE
>CP007216.2|AJQ70950.1|980994_981729_+|phosphoadenosine-phosphosulfate-reductase
MSQLDLNALNELPKVDRVMALAETNAQLEKLSAEERVAWALENLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNEINKVEPMNRALKELNAQTWFAGLRREQSGSRAHLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>CP007216.2|AWH56052.1|981617_981860_-|hypothetical-protein
MLLGTHSLAAFKQLELFWVYNQFKIRLPAGFFIAASIIIPRKDNYPSCSPHSRFSPKKRVSSSAMPGSHLRVVCVSPTDR
>CP007216.2|AJQ70949.2|981941_982895_-|SPI-1-type-III-secretion-system-effector-SopD
MPVTLSFGNHQNYTLNESRLAHLLSADKEKAIHMGGWDKVQDHFRAEKKDHALEVLHSIIHGQGRGEPGEMEVNVEDINKIYAFKRLQHLACPAHQDLFTIKMDASQTQFLLMVGDTVISQSNIKDILNISDDAVIESMSRKERQLFLQICEVIGSKMTWHPELLQESISTLRKEVTGNAQIKTAVYEMMRPAEAPDHPLVEWQDSLTADEKSMLACINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHSYSPFSEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKLYLTHERSLHIGKDGCSRNILLV
>CP007216.2|AJQ70947.2|983338_986002_+|CRISPR-associated-helicase/endonuclease-Cas3
MSIYHYWGKSRRGETNGGDDYHLLCWHSLDVAAVGYWMVINNIYFIDHYLKKLGIQDKEQAAQFFAWILCWHDIGKFAHSFQQLYRHEALNIFNEPTRHYEKIAHTTLGYMLWNSWLSECPELFPPSSLSARKSKRVMALWMPVTTGHHGRPPEAIQELDHFRQQDKDAARDFLLRIKALFPLITLPEAWDEDEGIDQFQQLSWFISAAVVLADWTGSASRYFPRTAEKMPVDTYWQQALAKAQTAITLFPSAANVSAFTGIETLFPFIQHPTPLQQKALELDINVDGAQLFILEDVTGAGKTEAALILAHRLMAAGKAQGLYFGLPTMATANAMFERMEKTWLALYQPDSRPSLILAHSARRLMDRFNQSIWSVTLSGTEEPDEAQPYSQGCVAWFADSNKKALLAEVGVGTLDQAMMAVMPFKHNNLRLLGLSNKILLADEIHACDAWMSRILEGLIERQASNGNATILLSATLSQQQRDKLVAAFSRGVRRSVQAPLLGHDDYPWLTQVTQTELISQRVDTRKEVERSVDIGWLHSEEACLERIGEAVEKGNCIAWIRNSVDDAIRIYRQLQLSKVVVTENLLLFHSRFAFYDRQRIESQTLNLFGKQSGAQRAGKVIIATQVIEQSLDIDCDEMISDLAPVDLLIQRAGRLQRHIRDRNGLVKKSGQDERETPVLRILAPEWDDAPRENWLSSAMRNSAYVYPDHGRMWLTQRILREQGTIRMPQSARLLIESVYGEDVNMPVGFAKTEQLQEGKFYCDRAFAGQMLLNFAPGYCAEISDSLPEKMSTRLAEESVTLWLAKIVDGVVTPYTSGEHAWEMSVLRVRQSWWNKHKDEFEKLDGEPLRKWCAQQHQDKDFATVIVVTDCAACGYSANEGLIGMMGE
>CP007216.2|AJQ70946.1|986013_987573_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MDNFSLLTTPWLPVRFKDGSTGKLAPVNLADENVVDIAATRADLQGAAWQFLLGLLQCSIAPKRYKNWEDIWFDGLHADALHKALAPLEHAFQFGAETPSFMQDFEELPDNKITIASLLPETPGIQTTELNTDHFIKRGVMECFCPHCAALALFSMQLNAPSGGQGYRTGLRGGGPLTTLIELQEYQGERQTPLWRKLWLNVMPQDAADLPLPVVYDAAVFPWLAATRTSEPPAHTITTDEQVNKLQAYWGMPRRIRLDFATIRQGVCNICGNNSDELLIQMLVKNYGVNYDRWRHPLTPHRLQIKNSKGFEPVITQPGGLLWRDWLGLSQENPTEKNTEYPAQVIKVFNARELRNIKVGLWGFGADFKKMKIRCWYEHHFPLLMTEGLIPDLRKATQTATRLLSLLRSALKEAWFANAKGARGDFSFIDIDFWNLTQGRFLNLIHDLENGHKPDERLNKWQRELWLFTRCYFDDHVFTNPYESSDLERIMKARKKYFTSSAEKQSAKAAKAKKQEAAE

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Crispr_ID: CP007216_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP007216_3

991886-993012

TypeI-E

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	PILER-CR

18 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of CP007216_3

>merge|CP007216|3|991886-993012|CRISPRCasFinder,CRT,PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCGCCAGCCTGTAGCGTGGGGGCGTTGGGTAGCCTGTGTTCCCCGCGCCAGCGGGGATAAACCGCATCTTTTACGCATGTTGATGTGCGTTCAAATGTGTTCCCCGCGCCAGCGGGGATAAACCGAAATCGTCAATAAAATTATTGGCGCGCCATCCGTGTTCCCCGCGCCAGCGGGGATAAACCGCGTTATAAGGCGGTAACGGCGAAAACATATGAGTGTTCCCCGCGCCAGCGGGGATAAACCGCGCACGATCTACAGTCCAGCTATTCGGGATGGGTGTTCCCCGCGCCAGCGGGGATAAACCGATTTTTGCCTCCAGCGCGAACAGCATGGCGCCGTGTTCCCCGCGCCAGCGGGGATAAACCGTCCGACTCGCCAACCTGGTCTATGTGCTCTATGTGTTCCCCGCGCCAGCGGGGATAAACCGCGTCGTCATTGCCGATCCTTTAACGTCCAAATGTGTTCCCCGCGCCAGCGGGGATAAACCGATAATTTGCTGAACTACGTCCGTATTGAGCTGGTGTTCCCCGCGCCAGCGGGGATAAACCGTGGCCGGAGCCTAAAGACGGGGAGCCGCGTTTGTGTTCCCCGCGCCAGCGGGGATAAACCGGGGGGTGATAACCGCCTCGCTGAACGCTACGCGTGTTCCCCGCGCCAGCGGGGATAAACCGAGTGAAAAATTGCGGTTCGTCCTCCTCATCGTGTGTTCCCCGCGCCAGCGGGGATAAACCGACTAACGAAAGATTAAACCAGCGCATTGAGTTGTGTTCCCCGCGCCAGCGGGGATAAACCGCATTCGCTCAATAGCGGCCCGCGTGGCGGTGAGTGTTCCCCGCGCCAGCGGGGATAAACCGGGGATTATGTCCTCTAAAGACTGGCTAATCACGTGTTCCCCGCGCCAGCGGGGATAAACCGCGCGCCCTGCGTGATTTTGAAAATCTGGTGGAGTGTTCCCCGCGCCAGCGGGGATAAGCCGTTGAATACGTCGCGATACCAGTCACTCCGGAAGTCTTCCCCGCGCTAGCGGGGATAAACCGAGGGGCGTTCCGCAGTCGGCAAGGGCTGAAAAATGTTCCCCGCGTCAGCGGGGATAAACAC

>CP007216|3|3|991886-993012|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCAGCCTGTAGCGTGGGGGCGTTGGGTAGCCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CATCTTTTACGCATGTTGATGTGCGTTCAAAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAATCGTCAATAAAATTATTGGCGCGCCATCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTTATAAGGCGGTAACGGCGAAAACATATGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCACGATCTACAGTCCAGCTATTCGGGATGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTTTTGCCTCCAGCGCGAACAGCATGGCGCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCCGACTCGCCAACCTGGTCTATGTGCTCTAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTCGTCATTGCCGATCCTTTAACGTCCAAAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATAATTTGCTGAACTACGTCCGTATTGAGCTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGGCCGGAGCCTAAAGACGGGGAGCCGCGTTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGGGTGATAACCGCCTCGCTGAACGCTACGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGTGAAAAATTGCGGTTCGTCCTCCTCATCGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACTAACGAAAGATTAAACCAGCGCATTGAGTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CATTCGCTCAATAGCGGCCCGCGTGGCGGTGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGATTATGTCCTCTAAAGACTGGCTAATCAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCGCCCTGCGTGATTTTGAAAATCTGGTGGA
GTGTTCCCCGCGCCAGCGGGGATAAGCCG	TTGAATACGTCGCGATACCAGTCACTCCGGAA
GTCTTCCCCGCGCTAGCGGGGATAAACCG	AGGGGCGTTCCGCAGTCGGCAAGGGCTGAAAA
ATGTTCCCCGCGTCAGCGGGGATAAACAC

>CP007216|3|2|991886-993012|CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCAGCCTGTAGCGTGGGGGCGTTGGGTAGCCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CATCTTTTACGCATGTTGATGTGCGTTCAAAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAATCGTCAATAAAATTATTGGCGCGCCATCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTTATAAGGCGGTAACGGCGAAAACATATGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCACGATCTACAGTCCAGCTATTCGGGATGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTTTTGCCTCCAGCGCGAACAGCATGGCGCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCCGACTCGCCAACCTGGTCTATGTGCTCTAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTCGTCATTGCCGATCCTTTAACGTCCAAAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATAATTTGCTGAACTACGTCCGTATTGAGCTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGGCCGGAGCCTAAAGACGGGGAGCCGCGTTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGGGTGATAACCGCCTCGCTGAACGCTACGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGTGAAAAATTGCGGTTCGTCCTCCTCATCGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACTAACGAAAGATTAAACCAGCGCATTGAGTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CATTCGCTCAATAGCGGCCCGCGTGGCGGTGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGATTATGTCCTCTAAAGACTGGCTAATCAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCGCCCTGCGTGATTTTGAAAATCTGGTGGA
GTGTTCCCCGCGCCAGCGGGGATAAGCCG	TTGAATACGTCGCGATACCAGTCACTCCGGAA
GTCTTCCCCGCGCTAGCGGGGATAAACCG	AGGGGCGTTCCGCAGTCGGCAAGGGCTGAAAA
ATGTTCCCCGCGTCAGCGGGGATAAACAC

>CP007216|3|2|992008-992951|PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAATCGTCAATAAAATTATTGGCGCGCCATCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTTATAAGGCGGTAACGGCGAAAACATATGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCACGATCTACAGTCCAGCTATTCGGGATGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTTTTGCCTCCAGCGCGAACAGCATGGCGCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCCGACTCGCCAACCTGGTCTATGTGCTCTAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTCGTCATTGCCGATCCTTTAACGTCCAAAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATAATTTGCTGAACTACGTCCGTATTGAGCTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGGCCGGAGCCTAAAGACGGGGAGCCGCGTTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGGGTGATAACCGCCTCGCTGAACGCTACGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGTGAAAAATTGCGGTTCGTCCTCCTCATCGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACTAACGAAAGATTAAACCAGCGCATTGAGTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CATTCGCTCAATAGCGGCCCGCGTGGCGGTGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGATTATGTCCTCTAAAGACTGGCTAATCAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCGCCCTGCGTGATTTTGAAAATCTGGTGGA
GTGTTCCCCGCGCCAGCGGGGATAAGCCG	TTGAATACGTCGCGATACCAGTCACTCCGGAA
GTCTTCCCCGCGCTAGCGGGGATAAACCG

Protein	Signature genes	Signature genes Name	Protein_function
CP007216.2\|AJQ70929.2\|1000383_1001145_+\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732
CP007216.2\|AJQ70933.1\|997837_998149_+\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156
CP007216.2\|AJQ70930.1\|999353_1000403_+\|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl\|CDD\|234884
CP007216.2\|AJQ70942.1\|989928_990579_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|273869
CP007216.2\|AJQ70935.1\|996667_997273_+\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661
CP007216.2\|AJQ70931.1\|998877_999357_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851
CP007216.2\|AJQ70949.2\|981941_982895_-\|SPI-1-type-III-secretion-system-effector-SopD	unknown	unknown	gnl\|CDD\|185277
CP007216.2\|AJQ70938.1\|993026_994073_-\|aminopeptidase	unknown	unknown	gnl\|CDD\|182299
CP007216.2\|AJQ70940.1\|991495_991789_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	cd09648_cas2_CAS-I-E	gnl\|CDD\|236930
CP007216.2\|AJQ70934.2\|997290_997647_+\|DUF3561-domain-containing-protein	unknown	unknown	gnl\|CDD\|371891
CP007216.2\|AWH56052.1\|981617_981860_-\|hypothetical-protein	unknown	unknown	unknown
CP007216.2\|AJQ70947.2\|983338_986002_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
CP007216.2\|AJQ70943.1\|989200_989947_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776
CP007216.2\|AJQ70937.2\|994323_995232_+\|sulfate-adenylyltransferase-subunit-CysD	unknown	unknown	gnl\|CDD\|235375
CP007216.2\|AJQ70941.1\|990575_991496_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
CP007216.2\|AJQ70946.1\|986013_987573_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
CP007216.2\|AJQ70945.1\|987569_988118_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|187862
CP007216.2\|AJQ70944.1\|988131_989190_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|273843
CP007216.2\|AJQ70932.2\|998167_998878_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
CP007216.2\|AJQ70936.1\|995241_996681_+\|sulfate-adenylyltransferase	unknown	unknown	gnl\|CDD\|235349

Protein	Function_ID	Function_description	E-value
CP007216.2\|AJQ70929.2\|1000383_1001145_+\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	7.64916e-147
CP007216.2\|AJQ70933.1\|997837_998149_+\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	1.08865e-64
CP007216.2\|AJQ70930.1\|999353_1000403_+\|tRNA-pseudouridine(13)-synthase-TruD	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
CP007216.2\|AJQ70942.1\|989928_990579_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|273869	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1974 from Chlorobium tepidum, is found in the Ecoli subtype of CRISPR/Cas regions and is designated Cse3 (CRISPR/Cas Subtype Ecoli protein 3). The representative of this family from Thermus thermophilus HB8 (TTHB192) has been crystallized and found to have a structure consisting of two domains with opposing parallel beta-sheets known as a beta-sheet platform. This structure is similar to those found in the Sex-lethal protein and poly(A)-binding protein. This structure is consistent with an RNA-binding function.	6.2871e-76
CP007216.2\|AJQ70935.1\|996667_997273_+\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	4.61291e-146
CP007216.2\|AJQ70949.2\|981941_982895_-\|SPI-1-type-III-secretion-system-effector-SopD	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
CP007216.2\|AJQ70938.1\|993026_994073_-\|aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
CP007216.2\|AJQ70940.1\|991495_991789_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	1.1867e-62
CP007216.2\|AJQ70934.2\|997290_997647_+\|DUF3561-domain-containing-protein	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	4.85353e-49
CP007216.2\|AJQ70931.1\|998877_999357_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	1.27909e-104
CP007216.2\|AJQ70947.2\|983338_986002_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	0
CP007216.2\|AJQ70943.1\|989200_989947_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	1.38373e-47
CP007216.2\|AJQ70937.2\|994323_995232_+\|sulfate-adenylyltransferase-subunit-CysD	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
CP007216.2\|AJQ70941.1\|990575_991496_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	3.09819e-157
CP007216.2\|AJQ70946.1\|986013_987573_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	5.17383e-173
CP007216.2\|AJQ70945.1\|987569_988118_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	8.80691e-33
CP007216.2\|AJQ70944.1\|988131_989190_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	9.1402e-138
CP007216.2\|AJQ70932.2\|998167_998878_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	2.67998e-119
CP007216.2\|AJQ70936.1\|995241_996681_+\|sulfate-adenylyltransferase	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0

>CP007216.2|AJQ70940.1|991495_991789_+|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MSMVVVVTENVPPRLRGRLAVWLLEVRAGVYVGDTSKRIREMIWQQITQLGGVGNVVMAWATNTESGFEFQTWGENRRIPVDLDGLRLVSFLPVENQ
>CP007216.2|AJQ70941.1|990575_991496_+|type-I-E-CRISPR-associated-endonuclease-Cas1
MTFVPLNPIPLKDRTSMIFLQYGQIDVLDGAFVLIDKTGVRTHIPVGSVACIMLEPGTRVSHAAVHLASTVGTLLVWVGEAGVRVYSSGQPGGARADKLLYQAKLALDDDLRLKVVRKMYELRFREPPPARRSVEQLRGIEGSRVRATYALLAKQYGVKWHGRNYDPKDWEKGDVVNRCISAATSCLYGISEAAILAAGYAPAIGFIHSGKPLSFVYDIADIIKFESVVPKAFEIAARHPAEPDKEVRLACRDIFRSSKLTGKLIPLIEEVLAAGEIKPPQPAPDMLPPAIPEPESLGDSGHRGHG
>CP007216.2|AJQ70942.1|989928_990579_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSRITLHTSELSPAQLLHLVERGEYVMHQWLWDLFPGGKERQFLYRREELQGAFRFFVLSQEQPAASAIFDVQTRPFAPTLSAGQTLRFNLRANPTICKNGKRHDLLMEAKRQRKTQGDSQDIWSYQQQAALTWLARQGEQNGFTLRETSVDAYRQQQIHREKSRQMIQFSSVDYTGVLVLNDPVLFLQRLAQGYGKSRAFGCGMMMIKPGDDA
>CP007216.2|AJQ70943.1|989200_989947_+|type-I-E-CRISPR-associated-protein-Cas5/CasD
MSQYLVFQLHGPMASWGVDAPGEVRHSHELPSRSALLGLLAAALGIRRDEEERLNAFNRHYQFLLCASGNPRWARDYHTVQMPKEVRKARYFSRREELQDPELLSALISRRDYYTDAWWMIAVSATPDAPYTLAQLQASLQHPVFPLYLGRKSHPLALPLAPQLLEGNAADVLREAYRWYQDQFNALKLPLPRLQNECWWEGEHDGLTASKILRRRDMPLSRQQWLFGERSVNQGPWLRKEDACISQE
>CP007216.2|AJQ70944.1|988131_989190_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTTFIQLHLLTAYPAANLNRDDTGAPKTVVLGGATRLRISSQSLKRAWRTSELFEQALAGNIGIRSGRIAREAAQILIESGIDAKKAVEYVKNIANYFGKVKAEKKPKDELTNAETGQLVHISPAEFEGVKALAHRLAEEKRAPKEEELALLRKDRMAVDIAMFGRMLAEKTDFNVEAACQVAHAFGVSETIVEDDFFTAVDDLRQASAEDAGAGHLGETGFGSALFYTYICINKDLLVKNLNGNEELANKTLRAFTEAALKVSPTGKQNSFASRAYASWALAEKGTDQPRSLAAAFYEPINGTDQLNVAVKRITSLHKNMNKVYGQRTDTASFDVMNQQGSMEDVLDFICA
>CP007216.2|AJQ70945.1|987569_988118_+|type-I-E-CRISPR-associated-protein-Cse2/CasB
MSIVQEDHKATLRKWHEDLQEKRGARASLRRSKTVNEACLSEGFHLLLMQTHSLWKNKADWHVTALAITAVLAAHIKFIDERQSFATQLGQKKSGDNPVMSKLRFSRLSAVKNPDELLRHLRRAVQLLDGSVNLISLADDIFRWCQEQDDLLNHHRRQQRPTEFLRIRWALEYYQAGDNEQD
>CP007216.2|AJQ70946.1|986013_987573_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MDNFSLLTTPWLPVRFKDGSTGKLAPVNLADENVVDIAATRADLQGAAWQFLLGLLQCSIAPKRYKNWEDIWFDGLHADALHKALAPLEHAFQFGAETPSFMQDFEELPDNKITIASLLPETPGIQTTELNTDHFIKRGVMECFCPHCAALALFSMQLNAPSGGQGYRTGLRGGGPLTTLIELQEYQGERQTPLWRKLWLNVMPQDAADLPLPVVYDAAVFPWLAATRTSEPPAHTITTDEQVNKLQAYWGMPRRIRLDFATIRQGVCNICGNNSDELLIQMLVKNYGVNYDRWRHPLTPHRLQIKNSKGFEPVITQPGGLLWRDWLGLSQENPTEKNTEYPAQVIKVFNARELRNIKVGLWGFGADFKKMKIRCWYEHHFPLLMTEGLIPDLRKATQTATRLLSLLRSALKEAWFANAKGARGDFSFIDIDFWNLTQGRFLNLIHDLENGHKPDERLNKWQRELWLFTRCYFDDHVFTNPYESSDLERIMKARKKYFTSSAEKQSAKAAKAKKQEAAE
>CP007216.2|AJQ70947.2|983338_986002_+|CRISPR-associated-helicase/endonuclease-Cas3
MSIYHYWGKSRRGETNGGDDYHLLCWHSLDVAAVGYWMVINNIYFIDHYLKKLGIQDKEQAAQFFAWILCWHDIGKFAHSFQQLYRHEALNIFNEPTRHYEKIAHTTLGYMLWNSWLSECPELFPPSSLSARKSKRVMALWMPVTTGHHGRPPEAIQELDHFRQQDKDAARDFLLRIKALFPLITLPEAWDEDEGIDQFQQLSWFISAAVVLADWTGSASRYFPRTAEKMPVDTYWQQALAKAQTAITLFPSAANVSAFTGIETLFPFIQHPTPLQQKALELDINVDGAQLFILEDVTGAGKTEAALILAHRLMAAGKAQGLYFGLPTMATANAMFERMEKTWLALYQPDSRPSLILAHSARRLMDRFNQSIWSVTLSGTEEPDEAQPYSQGCVAWFADSNKKALLAEVGVGTLDQAMMAVMPFKHNNLRLLGLSNKILLADEIHACDAWMSRILEGLIERQASNGNATILLSATLSQQQRDKLVAAFSRGVRRSVQAPLLGHDDYPWLTQVTQTELISQRVDTRKEVERSVDIGWLHSEEACLERIGEAVEKGNCIAWIRNSVDDAIRIYRQLQLSKVVVTENLLLFHSRFAFYDRQRIESQTLNLFGKQSGAQRAGKVIIATQVIEQSLDIDCDEMISDLAPVDLLIQRAGRLQRHIRDRNGLVKKSGQDERETPVLRILAPEWDDAPRENWLSSAMRNSAYVYPDHGRMWLTQRILREQGTIRMPQSARLLIESVYGEDVNMPVGFAKTEQLQEGKFYCDRAFAGQMLLNFAPGYCAEISDSLPEKMSTRLAEESVTLWLAKIVDGVVTPYTSGEHAWEMSVLRVRQSWWNKHKDEFEKLDGEPLRKWCAQQHQDKDFATVIVVTDCAACGYSANEGLIGMMGE
>CP007216.2|AJQ70949.2|981941_982895_-|SPI-1-type-III-secretion-system-effector-SopD
MPVTLSFGNHQNYTLNESRLAHLLSADKEKAIHMGGWDKVQDHFRAEKKDHALEVLHSIIHGQGRGEPGEMEVNVEDINKIYAFKRLQHLACPAHQDLFTIKMDASQTQFLLMVGDTVISQSNIKDILNISDDAVIESMSRKERQLFLQICEVIGSKMTWHPELLQESISTLRKEVTGNAQIKTAVYEMMRPAEAPDHPLVEWQDSLTADEKSMLACINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHSYSPFSEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKLYLTHERSLHIGKDGCSRNILLV
>CP007216.2|AWH56052.1|981617_981860_-|hypothetical-protein
MLLGTHSLAAFKQLELFWVYNQFKIRLPAGFFIAASIIIPRKDNYPSCSPHSRFSPKKRVSSSAMPGSHLRVVCVSPTDR
>CP007216.2|AJQ70938.1|993026_994073_-|aminopeptidase
MFSATRRFAVILALGVGFILPAQAASPGPGEIANTQARHIATFFPGRMTGSPAEMLSADYLRQQFTQMGYQSDIRTFNSRFIYTTKDNRKNWHNVTGSTVIAAHEGRVPQQIIIMAHLDTYAPQSDADVDANLGGLTLQGMDDNAAGLGVMLELAARLKDIPTHYGIRFIATSGEEEGKLGAENLLKRMSDAEKKNTLLVINLDNLIVGDKLYFNSGKNTPEAVRTLTRDRALAIARRYGIAANTNPGRNPSYPKGTGCCNDAEVFDKAGISVLSVEATNWNLGKKDGYQQRVKNASFPNGNSWHDVRLDNQQHIDKALPGRIERRSRDVVRIMLPLVKELAKAEKTS
>CP007216.2|AJQ70937.2|994323_995232_+|sulfate-adenylyltransferase-subunit-CysD
MDQKRLTHLRQLEAESIHIIREVAAEFANPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYAFRDRTANAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDHFHRWDPKNQRPELWRNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMVDDDRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESHAQTLPEIIEEMLVSTTSERQGRMIDRDQAGSMELKKRQGYF
>CP007216.2|AJQ70936.1|995241_996681_+|sulfate-adenylyltransferase
MNTILAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTLQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYREETFARIREDYLTFAEQLPGDLDIRFVPLSALEGDNVAAQSANMRWYSGPTLLEVLETVDIQRAVDRQPMRFPVQYVNRPNLDFRGYAGTLASGSVKVGERIKVLPSGVESSVARIVTFDGDKEEACAGEAITLVLNDDIDISRGDLLLAANETLAPARHAAIDVVWMAEQPLAPGQSYDVKLAGKKTRARIEAIRYQIDINNLTQRDVESLPLNGIGLVEMTFDEPLALDIYQQNPVTGGLIFIDRLSNVTVGAGMVRELDERGATPPVEYSAFELELNALVRRHFPHWDARDLLGDKHGAA
>CP007216.2|AJQ70935.1|996667_997273_+|adenylyl-sulfate-kinase
MALHDENVVWHSHPVTVAAREQLHGHRGVVLWFTGLSGSGKSTVAGALEEALHQRGVSTYLLDGDNVRHGLCRDLGFSDADRQENIRRVGEVASLMADAGLIVLTAFISPHRAERQLVKERVGHDRFIEIYVNTPLAICEQRDPKGLYKKARAGELRNFTGIDAIYEAPDSPQVHLNGEQLVTNLVSQLLDLLRRRDIIRS
>CP007216.2|AJQ70934.2|997290_997647_+|DUF3561-domain-containing-protein
MPGMVKVTGFNMRNSHNITFTRSDAFMVDDDATSAFPGAVVGFVSWLLALGIPFLLYGPNTLFFFLYTWPFFLALMPVSVIIGIALHLLVKGKILFSIMFTLLAVGALFGALFIWLLG
>CP007216.2|AJQ70933.1|997837_998149_+|cell-division-protein-FtsB
MGKLTLLLLALLVWLQYSLWFGKNGIHDYSRVNDDVVAQQATNAKLKARNDQLFAEIDDLNGGQEAIEERARNELSMTKPGETFYRLVPDASKRAATAGQTHR
>CP007216.2|AJQ70932.2|998167_998878_+|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MAATLLDVCAVVPAAGFGRRMQTECPKQYLSIGNKTILEHSVHALLAHPRVTRVVIAISPGDHRFAQLPLANHPQITVVDGGNERADSVLAGLQAVAKAQWVLVHDAARPCLHQDDLARLLAISENSRVGGILASPVRDTMKRGEPGKNAIAHTVERADLWHALTPQFFPRELLYDCLTRALNEGATITDEASALEYCGFHPALVEGRADNIKVTRPEDLALAEFYLTRTIHQEKA
>CP007216.2|AJQ70931.1|998877_999357_+|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLMKAAK
>CP007216.2|AJQ70930.1|999353_1000403_+|tRNA-pseudouridine(13)-synthase-TruD
MTEFDNLTWLHGKPQGSGLLKANPEDFVVVEDLGFTPDGEGEHILLRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDFSAFQLEGCKVLEYARHKRKLRLGALKGNAFTLVLREISDRRDVETRLQAIRDGGVPNYFGAQRFGIGGSNLQGALRWAQSNAPVRDRNKRSFWLSAARSALFNQIVHQRLKKPDFNQVVDGDALQLAGRGSWFVATSEELPELQRRVDEKELMITASLPGSGEWGTQRAALAFEQDAIAQETVLQSLLLREKVEASRRAMLLYPQQLSWNWWDDVTVELRFWLPAGSFATSVVRELINTMGDYAHIAE
>CP007216.2|AJQ70929.2|1000383_1001145_+|5'/3'-nucleotidase-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFDNGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLNGYQHYDTAAAVTCALLRGLSREPLRTGRILNVNVPDLPLAQIKGIRVTRCGSRHPADKVIPQEDPRGNTLYWIGPPGDKYDAGPDTDFAAVDEGYVSVTPLHVDLTAHSAHDVVSDWLDSVGVGTQW

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP007216_3	3.10\|992464\|32\|CP007216\|CRISPRCasFinder,CRT,PILER-CR	992464-992495	32	NZ_CP027613	Klebsiella pneumoniae subsp. ozaenae strain AR_0096 plasmid unnamed1, complete sequence	89096-89127	4	0.875
CP007216_3	3.10\|992464\|32\|CP007216\|CRISPRCasFinder,CRT,PILER-CR	992464-992495	32	NZ_CP054718	Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence	37931-37962	4	0.875
CP007216_3	3.10\|992464\|32\|CP007216\|CRISPRCasFinder,CRT,PILER-CR	992464-992495	32	CP051275	Salmonella phage SW-37, complete genome	24498-24529	4	0.875
CP007216_3	3.10\|992464\|32\|CP007216\|CRISPRCasFinder,CRT,PILER-CR	992464-992495	32	MW013502	Salmonella virus L cI-40 13-am43, complete genome	22995-23026	4	0.875
CP007216_3	3.10\|992464\|32\|CP007216\|CRISPRCasFinder,CRT,PILER-CR	992464-992495	32	MN098327	Klebsiella phage Mulock, complete genome	37856-37887	4	0.875
CP007216_3	3.10\|992464\|32\|CP007216\|CRISPRCasFinder,CRT,PILER-CR	992464-992495	32	NC_004348	Enterobacteria phage ST64T, complete genome	6181-6212	4	0.875
CP007216_3	3.10\|992464\|32\|CP007216\|CRISPRCasFinder,CRT,PILER-CR	992464-992495	32	MW013503	Salmonella virus L cII-101, complete genome	22995-23026	4	0.875
CP007216_3	3.10\|992464\|32\|CP007216\|CRISPRCasFinder,CRT,PILER-CR	992464-992495	32	NC_018275	Salmonella phage vB_SemP_Emek, complete genome	23161-23192	4	0.875
CP007216_3	3.10\|992464\|32\|CP007216\|CRISPRCasFinder,CRT,PILER-CR	992464-992495	32	NC_042346	Salmonella virus BTP1 genome assembly, chromosome: BTP1	21878-21909	4	0.875
CP007216_3	3.10\|992464\|32\|CP007216\|CRISPRCasFinder,CRT,PILER-CR	992464-992495	32	AY052766	Salmonella typhimurium bacteriophage ST64T, complete genome	6181-6212	4	0.875
CP007216_3	3.10\|992464\|32\|CP007216\|CRISPRCasFinder,CRT,PILER-CR	992464-992495	32	MF188997	Salmonella phage vB_SalP_PM43, complete genome	6181-6212	4	0.875
CP007216_3	3.10\|992464\|32\|CP007216\|CRISPRCasFinder,CRT,PILER-CR	992464-992495	32	NZ_CP054718	Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence	11202-11233	6	0.812
CP007216_3	3.10\|992464\|32\|CP007216\|CRISPRCasFinder,CRT,PILER-CR	992464-992495	32	NZ_CP054718	Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence	115172-115203	6	0.812
CP007216_3	3.3\|992037\|32\|CP007216\|CRISPRCasFinder,CRT,PILER-CR	992037-992068	32	NZ_CP050083	Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b3, complete sequence	24085-24116	7	0.781
CP007216_2	2.2\|975091\|32\|CP007216\|PILER-CR,CRISPRCasFinder,CRT	975091-975122	32	NZ_CP015322	Mesorhizobium amorphae CCNWGS0123 plasmid pM0123d, complete sequence	824700-824731	8	0.75
CP007216_3	3.1\|991915\|32\|CP007216\|CRISPRCasFinder,CRT	991915-991946	32	NZ_CP032319	Hymenobacter oligotrophus strain sh-6 plasmid unnamed2, complete sequence	4010-4041	8	0.75
CP007216_3	3.6\|992220\|32\|CP007216\|CRISPRCasFinder,CRT,PILER-CR	992220-992251	32	NZ_CP021653	Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence	1288773-1288804	8	0.75
CP007216_3	3.6\|992220\|32\|CP007216\|CRISPRCasFinder,CRT,PILER-CR	992220-992251	32	NZ_CP012940	Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence	1033889-1033920	8	0.75
CP007216_3	3.6\|992220\|32\|CP007216\|CRISPRCasFinder,CRT,PILER-CR	992220-992251	32	NZ_CP012944	Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence	809005-809036	8	0.75
CP007216_3	3.6\|992220\|32\|CP007216\|CRISPRCasFinder,CRT,PILER-CR	992220-992251	32	NZ_CP012688	Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence	1288780-1288811	8	0.75
CP007216_3	3.6\|992220\|32\|CP007216\|CRISPRCasFinder,CRT,PILER-CR	992220-992251	32	NC_017575	Ralstonia solanacearum Po82 megaplasmid, complete sequence	1537348-1537379	8	0.75
CP007216_3	3.6\|992220\|32\|CP007216\|CRISPRCasFinder,CRT,PILER-CR	992220-992251	32	NZ_CP026308	Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence	1537292-1537323	8	0.75
CP007216_3	3.6\|992220\|32\|CP007216\|CRISPRCasFinder,CRT,PILER-CR	992220-992251	32	CP047139	Ralstonia solanacearum strain CFBP 8695 plasmid unnamed, complete sequence	1215720-1215751	8	0.75
CP007216_3	3.6\|992220\|32\|CP007216\|CRISPRCasFinder,CRT,PILER-CR	992220-992251	32	NZ_CP051295	Ralstonia solanacearum strain CIAT_078 plasmid megaplasmid, complete sequence	1024904-1024935	8	0.75
CP007216_3	3.6\|992220\|32\|CP007216\|CRISPRCasFinder,CRT,PILER-CR	992220-992251	32	CP047137	Ralstonia solanacearum strain CFBP 8697 plasmid unnamed, complete sequence	1162298-1162329	8	0.75
CP007216_3	3.7\|992281\|32\|CP007216\|CRISPRCasFinder,CRT,PILER-CR	992281-992312	32	NZ_CP023524	Burkholderia gladioli pv. gladioli strain FDAARGOS_389 plasmid unnamed, complete sequence	81762-81793	8	0.75
CP007216_3	3.7\|992281\|32\|CP007216\|CRISPRCasFinder,CRT,PILER-CR	992281-992312	32	NZ_CP032326	Azospirillum brasilense strain MTCC4035 plasmid p5, complete sequence	2310-2341	8	0.75
CP007216_3	3.7\|992281\|32\|CP007216\|CRISPRCasFinder,CRT,PILER-CR	992281-992312	32	NZ_CP032326	Azospirillum brasilense strain MTCC4035 plasmid p5, complete sequence	359399-359430	8	0.75
CP007216_3	3.9\|992403\|32\|CP007216\|CRISPRCasFinder,CRT,PILER-CR	992403-992434	32	NZ_CP032703	Pantoea dispersa strain DSM 32899 plasmid unnamed1, complete sequence	17112-17143	8	0.75
CP007216_3	3.11\|992525\|32\|CP007216\|CRISPRCasFinder,CRT,PILER-CR	992525-992556	32	NC_016907	Gordonia polyisoprenivorans VH2 plasmid p174, complete sequence	64697-64728	8	0.75
CP007216_3	3.11\|992525\|32\|CP007216\|CRISPRCasFinder,CRT,PILER-CR	992525-992556	32	NZ_CP010858	Marinovum algicola DG 898 plasmid pMaD3	3485-3516	8	0.75
CP007216_2	2.1\|975030\|32\|CP007216\|PILER-CR,CRISPRCasFinder,CRT	975030-975061	32	MT711528	Escherichia phage vB_EcoS_fTaEco03, complete genome	12261-12292	9	0.719
CP007216_2	2.1\|975030\|32\|CP007216\|PILER-CR,CRISPRCasFinder,CRT	975030-975061	32	MT711525	Escherichia phage vB_EcoS_fKuEco01, complete genome	11823-11854	9	0.719
CP007216_2	2.1\|975030\|32\|CP007216\|PILER-CR,CRISPRCasFinder,CRT	975030-975061	32	GU196278	Escherichia phage K1H, complete genome	12039-12070	9	0.719
CP007216_2	2.1\|975030\|32\|CP007216\|PILER-CR,CRISPRCasFinder,CRT	975030-975061	32	NC_027993	Escherichia phage K1G, complete genome	13924-13955	9	0.719
CP007216_2	2.1\|975030\|32\|CP007216\|PILER-CR,CRISPRCasFinder,CRT	975030-975061	32	MT711527	Escherichia phage vB_EcoS_fTaEco01, complete genome	11822-11853	9	0.719
CP007216_2	2.4\|975213\|32\|CP007216\|PILER-CR,CRISPRCasFinder,CRT	975213-975244	32	MN694645	Marine virus AFVG_250M761, complete genome	31050-31081	9	0.719
CP007216_3	3.1\|991915\|32\|CP007216\|CRISPRCasFinder,CRT	991915-991946	32	NZ_CP023408	Streptomyces fungicidicus strain TXX3120 plasmid p1, complete sequence	264920-264951	9	0.719
CP007216_3	3.3\|992037\|32\|CP007216\|CRISPRCasFinder,CRT,PILER-CR	992037-992068	32	NZ_CP031397	Borreliella burgdorferi strain MM1 plasmid plsm_lp54, complete sequence	50720-50751	9	0.719
CP007216_3	3.3\|992037\|32\|CP007216\|CRISPRCasFinder,CRT,PILER-CR	992037-992068	32	NZ_CP019854	Borreliella burgdorferi plasmid lp54, complete sequence	50432-50463	9	0.719
CP007216_3	3.3\|992037\|32\|CP007216\|CRISPRCasFinder,CRT,PILER-CR	992037-992068	32	NZ_CP019765	Borreliella burgdorferi strain B31_NRZ isolate B31 plasmid p_lp54, complete sequence	50432-50463	9	0.719
CP007216_3	3.3\|992037\|32\|CP007216\|CRISPRCasFinder,CRT,PILER-CR	992037-992068	32	NC_011784	Borreliella burgdorferi ZS7 plasmid ZS7_lp54, complete sequence	50419-50450	9	0.719
CP007216_3	3.3\|992037\|32\|CP007216\|CRISPRCasFinder,CRT,PILER-CR	992037-992068	32	NZ_CP017218	Borreliella burgdorferi strain B331 plasmid B331_lp54, complete sequence	3209-3240	9	0.719
CP007216_3	3.3\|992037\|32\|CP007216\|CRISPRCasFinder,CRT,PILER-CR	992037-992068	32	NC_013130	Borreliella burgdorferi N40 plasmid N40_lp54, complete sequence	50566-50597	9	0.719
CP007216_3	3.3\|992037\|32\|CP007216\|CRISPRCasFinder,CRT,PILER-CR	992037-992068	32	NC_013129	Borreliella burgdorferi JD1 plasmid JD1_lp54, complete sequence	49711-49742	9	0.719
CP007216_3	3.3\|992037\|32\|CP007216\|CRISPRCasFinder,CRT,PILER-CR	992037-992068	32	NC_001857	Borreliella burgdorferi B31 plasmid lp54, complete sequence	50439-50470	9	0.719
CP007216_3	3.6\|992220\|32\|CP007216\|CRISPRCasFinder,CRT,PILER-CR	992220-992251	32	NZ_CP013071	Sphingobium indicum B90A plasmid pSRL1, complete sequence	95275-95306	9	0.719
CP007216_3	3.6\|992220\|32\|CP007216\|CRISPRCasFinder,CRT,PILER-CR	992220-992251	32	NZ_CP016593	Ketogulonicigenium vulgare strain SKV plasmid pKvSKV1, complete sequence	89822-89853	9	0.719
CP007216_3	3.6\|992220\|32\|CP007216\|CRISPRCasFinder,CRT,PILER-CR	992220-992251	32	NC_017386	Ketogulonicigenium vulgare WSH-001 plasmid 1, complete sequence	25018-25049	9	0.719
CP007216_3	3.6\|992220\|32\|CP007216\|CRISPRCasFinder,CRT,PILER-CR	992220-992251	32	NZ_CP032328	Azospirillum brasilense strain MTCC4035 plasmid p7, complete sequence	137631-137662	9	0.719
CP007216_3	3.6\|992220\|32\|CP007216\|CRISPRCasFinder,CRT,PILER-CR	992220-992251	32	NC_014621	Ketogulonicigenium vulgare Y25 plasmid pYP1, complete sequence	260283-260314	9	0.719
CP007216_3	3.6\|992220\|32\|CP007216\|CRISPRCasFinder,CRT,PILER-CR	992220-992251	32	NZ_CP012909	Ketogulonicigenium vulgare strain Hbe602 plasmid 1, complete sequence	89825-89856	9	0.719
CP007216_3	3.6\|992220\|32\|CP007216\|CRISPRCasFinder,CRT,PILER-CR	992220-992251	32	NZ_CP035512	Haematobacter massiliensis strain OT1 plasmid pOT1-2, complete sequence	36173-36204	9	0.719
CP007216_3	3.10\|992464\|32\|CP007216\|CRISPRCasFinder,CRT,PILER-CR	992464-992495	32	NZ_CP022925	Klebsiella pneumoniae strain ST307PT01 plasmid pJYC01B	25058-25082	9	0.719
CP007216_3	3.17\|992891\|32\|CP007216\|CRISPRCasFinder,CRT,PILER-CR	992891-992922	32	NZ_CP050096	Rhizobium leguminosarum bv. trifolii strain 22B plasmid pRL22b3, complete sequence	151458-151489	9	0.719
CP007216_3	3.17\|992891\|32\|CP007216\|CRISPRCasFinder,CRT,PILER-CR	992891-992922	32	NZ_CP050102	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b2, complete sequence	132694-132725	9	0.719
CP007216_3	3.17\|992891\|32\|CP007216\|CRISPRCasFinder,CRT,PILER-CR	992891-992922	32	NZ_CP050107	Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b1, complete sequence	169943-169974	9	0.719
CP007216_3	3.17\|992891\|32\|CP007216\|CRISPRCasFinder,CRT,PILER-CR	992891-992922	32	NZ_CP050112	Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b5, complete sequence	169942-169973	9	0.719
CP007216_3	3.17\|992891\|32\|CP007216\|CRISPRCasFinder,CRT,PILER-CR	992891-992922	32	NZ_CP048285	Rhizobium leguminosarum bv. viciae 248 plasmid pRle248a, complete sequence	30547-30578	9	0.719
CP007216_2	2.5\|975274\|32\|CP007216\|PILER-CR,CRISPRCasFinder,CRT	975274-975305	32	KF751793	Campylobacter phage CJIE4-1, complete genome	18118-18149	10	0.688
CP007216_2	2.10\|975579\|32\|CP007216\|CRISPRCasFinder,CRT	975579-975610	32	NZ_CP054615	Azospirillum oryzae strain KACC 14407 plasmid unnamed1, complete sequence	146919-146950	10	0.688
CP007216_3	3.1\|991915\|32\|CP007216\|CRISPRCasFinder,CRT	991915-991946	32	NZ_CP006373	Aureimonas sp. AU20 plasmid pAU20f, complete sequence	26111-26142	10	0.688
CP007216_3	3.2\|991976\|32\|CP007216\|CRISPRCasFinder,CRT	991976-992007	32	CP009871	Pantoea sp. PSNIH2 plasmid pPSP-cd6, complete sequence	51629-51660	10	0.688
CP007216_3	3.6\|992220\|32\|CP007216\|CRISPRCasFinder,CRT,PILER-CR	992220-992251	32	NC_019849	Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence	321926-321957	10	0.688
CP007216_3	3.6\|992220\|32\|CP007216\|CRISPRCasFinder,CRT,PILER-CR	992220-992251	32	NC_003078	Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence	1419399-1419430	10	0.688
CP007216_3	3.6\|992220\|32\|CP007216\|CRISPRCasFinder,CRT,PILER-CR	992220-992251	32	NZ_CP019586	Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence	1381773-1381804	10	0.688
CP007216_3	3.6\|992220\|32\|CP007216\|CRISPRCasFinder,CRT,PILER-CR	992220-992251	32	NC_017326	Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence	320882-320913	10	0.688
CP007216_3	3.6\|992220\|32\|CP007216\|CRISPRCasFinder,CRT,PILER-CR	992220-992251	32	NZ_CP021799	Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence	1485620-1485651	10	0.688
CP007216_3	3.6\|992220\|32\|CP007216\|CRISPRCasFinder,CRT,PILER-CR	992220-992251	32	NC_017323	Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence	1558385-1558416	10	0.688
CP007216_3	3.6\|992220\|32\|CP007216\|CRISPRCasFinder,CRT,PILER-CR	992220-992251	32	NZ_CP009146	Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence	316953-316984	10	0.688
CP007216_3	3.6\|992220\|32\|CP007216\|CRISPRCasFinder,CRT,PILER-CR	992220-992251	32	NC_018701	Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence	316127-316158	10	0.688
CP007216_3	3.6\|992220\|32\|CP007216\|CRISPRCasFinder,CRT,PILER-CR	992220-992251	32	NZ_CP021828	Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence	985870-985901	10	0.688
CP007216_3	3.6\|992220\|32\|CP007216\|CRISPRCasFinder,CRT,PILER-CR	992220-992251	32	NZ_CP030263	Ensifer adhaerens strain Corn53 plasmid AA, complete sequence	170280-170311	10	0.688
CP007216_3	3.6\|992220\|32\|CP007216\|CRISPRCasFinder,CRT,PILER-CR	992220-992251	32	NZ_CP021802	Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence	933963-933994	10	0.688
CP007216_3	3.6\|992220\|32\|CP007216\|CRISPRCasFinder,CRT,PILER-CR	992220-992251	32	NZ_CP021820	Sinorhizobium meliloti strain M162 plasmid psymB, complete sequence	662756-662787	10	0.688
CP007216_3	3.6\|992220\|32\|CP007216\|CRISPRCasFinder,CRT,PILER-CR	992220-992251	32	NZ_CP021831	Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence	566677-566708	10	0.688
CP007216_3	3.6\|992220\|32\|CP007216\|CRISPRCasFinder,CRT,PILER-CR	992220-992251	32	NZ_CP021823	Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence	1106266-1106297	10	0.688
CP007216_3	3.6\|992220\|32\|CP007216\|CRISPRCasFinder,CRT,PILER-CR	992220-992251	32	NZ_CP021814	Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence	198239-198270	10	0.688
CP007216_3	3.6\|992220\|32\|CP007216\|CRISPRCasFinder,CRT,PILER-CR	992220-992251	32	NZ_CP021795	Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence	646299-646330	10	0.688
CP007216_3	3.6\|992220\|32\|CP007216\|CRISPRCasFinder,CRT,PILER-CR	992220-992251	32	NZ_CP021810	Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence	1104921-1104952	10	0.688
CP007216_3	3.6\|992220\|32\|CP007216\|CRISPRCasFinder,CRT,PILER-CR	992220-992251	32	NZ_CP021806	Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence	698669-698700	10	0.688
CP007216_3	3.6\|992220\|32\|CP007216\|CRISPRCasFinder,CRT,PILER-CR	992220-992251	32	NZ_CP021218	Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence	470049-470080	10	0.688
CP007216_3	3.6\|992220\|32\|CP007216\|CRISPRCasFinder,CRT,PILER-CR	992220-992251	32	NZ_CP026527	Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence	320640-320671	10	0.688
CP007216_3	3.6\|992220\|32\|CP007216\|CRISPRCasFinder,CRT,PILER-CR	992220-992251	32	NZ_CP014797	Salipiger profundus strain JLT2016 plasmid pTPRO1, complete sequence	184288-184319	10	0.688
CP007216_3	3.6\|992220\|32\|CP007216\|CRISPRCasFinder,CRT,PILER-CR	992220-992251	32	NZ_CP019484	Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence	1537726-1537757	10	0.688
CP007216_3	3.6\|992220\|32\|CP007216\|CRISPRCasFinder,CRT,PILER-CR	992220-992251	32	NZ_CP043441	Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence	990467-990498	10	0.688
CP007216_3	3.6\|992220\|32\|CP007216\|CRISPRCasFinder,CRT,PILER-CR	992220-992251	32	NZ_CP019487	Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence	1314080-1314111	10	0.688
CP007216_3	3.6\|992220\|32\|CP007216\|CRISPRCasFinder,CRT,PILER-CR	992220-992251	32	NC_020560	Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence	1419404-1419435	10	0.688
CP007216_3	3.6\|992220\|32\|CP007216\|CRISPRCasFinder,CRT,PILER-CR	992220-992251	32	NC_016586	Azospirillum lipoferum 4B plasmid AZO_p2, complete sequence	405660-405691	10	0.688
CP007216_3	3.11\|992525\|32\|CP007216\|CRISPRCasFinder,CRT,PILER-CR	992525-992556	32	NC_005262	Burkholderia cepacia phage Bcep22, complete genome	17206-17237	10	0.688
CP007216_3	3.11\|992525\|32\|CP007216\|CRISPRCasFinder,CRT,PILER-CR	992525-992556	32	NZ_CP015746	Shinella sp. HZN7 plasmid pShin-10, complete sequence	61466-61497	10	0.688
CP007216_3	3.11\|992525\|32\|CP007216\|CRISPRCasFinder,CRT,PILER-CR	992525-992556	32	NZ_CP019446	Kosakonia cowanii JCM 10956 = DSM 18146 strain 888-76 plasmid p888-76-1, complete sequence	17753-17784	10	0.688
CP007216_3	3.11\|992525\|32\|CP007216\|CRISPRCasFinder,CRT,PILER-CR	992525-992556	32	NZ_CP032923	Agrobacterium tumefaciens strain 1D1108 plasmid pAt1D1108a, complete sequence	101360-101391	10	0.688
CP007216_3	3.14\|992708\|32\|CP007216\|CRISPRCasFinder,CRT,PILER-CR	992708-992739	32	NC_019957	Mycobacterium sp. JS623 plasmid pMYCSM01, complete sequence	63429-63460	10	0.688
CP007216_3	3.18\|992952\|32\|CP007216\|CRISPRCasFinder,CRT	992952-992983	32	CP054927	Streptomyces fulvissimus strain NA06532 plasmid unnamed1, complete sequence	47822-47853	11	0.656

1. spacer 3.10|992464|32|CP007216|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP027613 (Klebsiella pneumoniae subsp. ozaenae strain AR_0096 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.875

tggccggagcctaaagacggggagccgcgttt	CRISPR spacer
tggccggagccgaaagacggagagccgcgcct	Protospacer
*********** ********.********..*

2. spacer 3.10|992464|32|CP007216|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP054718 (Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence) position: , mismatch: 4, identity: 0.875

tggccggagcctaaagacggggagccgcgttt	CRISPR spacer
tggccggagccgaaagacggcgagccgcggct	Protospacer
*********** ******** ******** .*

3. spacer 3.10|992464|32|CP007216|CRISPRCasFinder,CRT,PILER-CR matches to CP051275 (Salmonella phage SW-37, complete genome) position: , mismatch: 4, identity: 0.875

tggccggagcctaaagacggggagccgcgttt	CRISPR spacer
tggccggagccgaaagacggtgagccgcggct	Protospacer
*********** ******** ******** .*

4. spacer 3.10|992464|32|CP007216|CRISPRCasFinder,CRT,PILER-CR matches to MW013502 (Salmonella virus L cI-40 13-am43, complete genome) position: , mismatch: 4, identity: 0.875

tggccggagcctaaagacggggagccgcgttt	CRISPR spacer
tggccggagccgaaagacggcgagccgcggct	Protospacer
*********** ******** ******** .*

5. spacer 3.10|992464|32|CP007216|CRISPRCasFinder,CRT,PILER-CR matches to MN098327 (Klebsiella phage Mulock, complete genome) position: , mismatch: 4, identity: 0.875

tggccggagcctaaagacggggagccgcgttt	CRISPR spacer
tggccggagccgaaagacggagagccgcgcct	Protospacer
*********** ********.********..*

6. spacer 3.10|992464|32|CP007216|CRISPRCasFinder,CRT,PILER-CR matches to NC_004348 (Enterobacteria phage ST64T, complete genome) position: , mismatch: 4, identity: 0.875

tggccggagcctaaagacggggagccgcgttt	CRISPR spacer
tggccggagccgaaagacggcgagccgcggct	Protospacer
*********** ******** ******** .*

7. spacer 3.10|992464|32|CP007216|CRISPRCasFinder,CRT,PILER-CR matches to MW013503 (Salmonella virus L cII-101, complete genome) position: , mismatch: 4, identity: 0.875

tggccggagcctaaagacggggagccgcgttt	CRISPR spacer
tggccggagccgaaagacggcgagccgcggct	Protospacer
*********** ******** ******** .*

8. spacer 3.10|992464|32|CP007216|CRISPRCasFinder,CRT,PILER-CR matches to NC_018275 (Salmonella phage vB_SemP_Emek, complete genome) position: , mismatch: 4, identity: 0.875

tggccggagcctaaagacggggagccgcgttt	CRISPR spacer
tggccggagccgaaagacggcgagccgcggct	Protospacer
*********** ******** ******** .*

9. spacer 3.10|992464|32|CP007216|CRISPRCasFinder,CRT,PILER-CR matches to NC_042346 (Salmonella virus BTP1 genome assembly, chromosome: BTP1) position: , mismatch: 4, identity: 0.875

tggccggagcctaaagacggggagccgcgttt	CRISPR spacer
tggccggagccgaaagacggcgagccgcggct	Protospacer
*********** ******** ******** .*

10. spacer 3.10|992464|32|CP007216|CRISPRCasFinder,CRT,PILER-CR matches to AY052766 (Salmonella typhimurium bacteriophage ST64T, complete genome) position: , mismatch: 4, identity: 0.875

tggccggagcctaaagacggggagccgcgttt	CRISPR spacer
tggccggagccgaaagacggcgagccgcggct	Protospacer
*********** ******** ******** .*

11. spacer 3.10|992464|32|CP007216|CRISPRCasFinder,CRT,PILER-CR matches to MF188997 (Salmonella phage vB_SalP_PM43, complete genome) position: , mismatch: 4, identity: 0.875

tggccggagcctaaagacggggagccgcgttt	CRISPR spacer
tggccggagccgaaagacggcgagccgcggct	Protospacer
*********** ******** ******** .*

12. spacer 3.10|992464|32|CP007216|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP054718 (Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.812

tggccggagcctaaagacggggagccgcgttt	CRISPR spacer
gtgccggagccgaaagacggcgagccgcggct	Protospacer
  ********* ******** ******** .*

13. spacer 3.10|992464|32|CP007216|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP054718 (Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.812

tggccggagcctaaagacggggagccgcgttt	CRISPR spacer
gtgccggagccgaaagacggcgagccgcggct	Protospacer
  ********* ******** ******** .*

14. spacer 3.3|992037|32|CP007216|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP050083 (Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b3, complete sequence) position: , mismatch: 7, identity: 0.781

aaatcgtcaataaaattattggcgc--gccatcc	CRISPR spacer
ggatcgtcaatgaatttattggcgctggctat--	Protospacer
..*********.** **********  **.**

15. spacer 2.2|975091|32|CP007216|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015322 (Mesorhizobium amorphae CCNWGS0123 plasmid pM0123d, complete sequence) position: , mismatch: 8, identity: 0.75

tgcttcctgctgattttctgcgtctactggat	CRISPR spacer
ctcatcctgcagattttcttcgtctactatgt	Protospacer
. * ****** ******** ********. .*

16. spacer 3.1|991915|32|CP007216|CRISPRCasFinder,CRT matches to NZ_CP032319 (Hymenobacter oligotrophus strain sh-6 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75

ccagcctg--tagcgtgggggcgttgggtagcct	CRISPR spacer
--ggtgtggccagcgtggtagcgttgggtagcct	Protospacer
  .*. **  .******* .**************

17. spacer 3.6|992220|32|CP007216|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021653 (Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

atttttgcctccagcgcgaacagcatggcgcc	CRISPR spacer
acgctggcgtccagcgcgagcagcatggccca	Protospacer
*. .* ** **********.********* *

18. spacer 3.6|992220|32|CP007216|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012940 (Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

atttttgcctccagcgcgaacagcatggcgcc	CRISPR spacer
acgctggcgtccagcgcgagcagcatggccca	Protospacer
*. .* ** **********.********* *

19. spacer 3.6|992220|32|CP007216|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012944 (Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

atttttgcctccagcgcgaacagcatggcgcc	CRISPR spacer
acgctggcgtccagcgcgagcagcatggccca	Protospacer
*. .* ** **********.********* *

20. spacer 3.6|992220|32|CP007216|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012688 (Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

atttttgcctccagcgcgaacagcatggcgcc	CRISPR spacer
acgctggcgtccagcgcgagcagcatggccca	Protospacer
*. .* ** **********.********* *

21. spacer 3.6|992220|32|CP007216|CRISPRCasFinder,CRT,PILER-CR matches to NC_017575 (Ralstonia solanacearum Po82 megaplasmid, complete sequence) position: , mismatch: 8, identity: 0.75

atttttgcctccagcgcgaacagcatggcgcc	CRISPR spacer
acgctggcgtccagcgcgagcagcatggccca	Protospacer
*. .* ** **********.********* *

22. spacer 3.6|992220|32|CP007216|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026308 (Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

atttttgcctccagcgcgaacagcatggcgcc	CRISPR spacer
acgctggcgtccagcgcgagcagcatggccca	Protospacer
*. .* ** **********.********* *

23. spacer 3.6|992220|32|CP007216|CRISPRCasFinder,CRT,PILER-CR matches to CP047139 (Ralstonia solanacearum strain CFBP 8695 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

atttttgcctccagcgcgaacagcatggcgcc	CRISPR spacer
acgctggcgtccagcgcgagcagcatggccca	Protospacer
*. .* ** **********.********* *

24. spacer 3.6|992220|32|CP007216|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP051295 (Ralstonia solanacearum strain CIAT_078 plasmid megaplasmid, complete sequence) position: , mismatch: 8, identity: 0.75

atttttgcctccagcgcgaacagcatggcgcc	CRISPR spacer
acgctggcgtccagcgcgagcagcatggccca	Protospacer
*. .* ** **********.********* *

25. spacer 3.6|992220|32|CP007216|CRISPRCasFinder,CRT,PILER-CR matches to CP047137 (Ralstonia solanacearum strain CFBP 8697 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

atttttgcctccagcgcgaacagcatggcgcc	CRISPR spacer
acgctggcgtccagcgcgagcagcatggccca	Protospacer
*. .* ** **********.********* *

26. spacer 3.7|992281|32|CP007216|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023524 (Burkholderia gladioli pv. gladioli strain FDAARGOS_389 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

tccgactcgccaacctggtctatgtgctctat	CRISPR spacer
ccctactggccaacctggtctatgtgcagccg	Protospacer
.** *** *******************  .

27. spacer 3.7|992281|32|CP007216|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032326 (Azospirillum brasilense strain MTCC4035 plasmid p5, complete sequence) position: , mismatch: 8, identity: 0.75

tccgactcgccaacctggtctatgtgctctat	CRISPR spacer
cgctgggcgccaacctgttctatctgctctat	Protospacer
. * .  ********** ***** ********

28. spacer 3.7|992281|32|CP007216|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032326 (Azospirillum brasilense strain MTCC4035 plasmid p5, complete sequence) position: , mismatch: 8, identity: 0.75

tccgactcgccaacctggtctatgtgctctat	CRISPR spacer
cgctgggcgccaacctgttctatctgctctat	Protospacer
. * .  ********** ***** ********

29. spacer 3.9|992403|32|CP007216|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032703 (Pantoea dispersa strain DSM 32899 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ataatttgctgaactacgtccgtattgagctg--	CRISPR spacer
aacgtttgctgaactttgtccgtatt--gccgac	Protospacer
*  .*********** .*********  **.*

30. spacer 3.11|992525|32|CP007216|CRISPRCasFinder,CRT,PILER-CR matches to NC_016907 (Gordonia polyisoprenivorans VH2 plasmid p174, complete sequence) position: , mismatch: 8, identity: 0.75

gggggtgataaccgcctcgctgaacgctacgc	CRISPR spacer
cggggtgatcaccgcctcgcggaaggtcttgc	Protospacer
 ******** ********** *** *.. .**

31. spacer 3.11|992525|32|CP007216|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010858 (Marinovum algicola DG 898 plasmid pMaD3) position: , mismatch: 8, identity: 0.75

gggggtgataaccgcctcgctgaacgctacgc	CRISPR spacer
cgtggtgatcaccggctcgctgaacggcctgc	Protospacer
 * ****** **** *********** . .**

32. spacer 2.1|975030|32|CP007216|PILER-CR,CRISPRCasFinder,CRT matches to MT711528 (Escherichia phage vB_EcoS_fTaEco03, complete genome) position: , mismatch: 9, identity: 0.719

ttgcgtatttcgattgtctggacatt-tcgtac	CRISPR spacer
ttgcgcatttcgatagtctggacgccgttaca-	Protospacer
*****.******** ********... *...*

33. spacer 2.1|975030|32|CP007216|PILER-CR,CRISPRCasFinder,CRT matches to MT711525 (Escherichia phage vB_EcoS_fKuEco01, complete genome) position: , mismatch: 9, identity: 0.719

ttgcgtatttcgattgtctggacatt-tcgtac	CRISPR spacer
ttgcgcatttcgatagtctggacgccgttaca-	Protospacer
*****.******** ********... *...*

34. spacer 2.1|975030|32|CP007216|PILER-CR,CRISPRCasFinder,CRT matches to GU196278 (Escherichia phage K1H, complete genome) position: , mismatch: 9, identity: 0.719

ttgcgtatttcgattgtctggacatt-tcgtac	CRISPR spacer
ttgcgcatttcgatagtctggacgccgttaca-	Protospacer
*****.******** ********... *...*

35. spacer 2.1|975030|32|CP007216|PILER-CR,CRISPRCasFinder,CRT matches to NC_027993 (Escherichia phage K1G, complete genome) position: , mismatch: 9, identity: 0.719

ttgcgtatttcgattgtctggacatt-tcgtac	CRISPR spacer
ttgcgcatttcgatagtctggacgccgttaca-	Protospacer
*****.******** ********... *...*

36. spacer 2.1|975030|32|CP007216|PILER-CR,CRISPRCasFinder,CRT matches to MT711527 (Escherichia phage vB_EcoS_fTaEco01, complete genome) position: , mismatch: 9, identity: 0.719

ttgcgtatttcgattgtctggacatt-tcgtac	CRISPR spacer
ttgcgcatttcgatagtctggacgccgttaca-	Protospacer
*****.******** ********... *...*

37. spacer 2.4|975213|32|CP007216|PILER-CR,CRISPRCasFinder,CRT matches to MN694645 (Marine virus AFVG_250M761, complete genome) position: , mismatch: 9, identity: 0.719

aacaggaacaggaaaaaaaagatttgtccggt	CRISPR spacer
tacagtaacaggaaaaaaaggattaatgatgc	Protospacer
 **** *************.**** .*   *.

38. spacer 3.1|991915|32|CP007216|CRISPRCasFinder,CRT matches to NZ_CP023408 (Streptomyces fungicidicus strain TXX3120 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.719

ccagcctgtagcgtgggggcgttgggtagcct	CRISPR spacer
cggccctgtagcggaggggcgttgggtcccgg	Protospacer
* . ********* .************  *

39. spacer 3.3|992037|32|CP007216|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP031397 (Borreliella burgdorferi strain MM1 plasmid plsm_lp54, complete sequence) position: , mismatch: 9, identity: 0.719

aaatcgtcaataaaattattggcgcgccatcc	CRISPR spacer
aaatcgtcgataacattattggcgaatatgac	Protospacer
********.**** ********** ..    *

40. spacer 3.3|992037|32|CP007216|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019854 (Borreliella burgdorferi plasmid lp54, complete sequence) position: , mismatch: 9, identity: 0.719

aaatcgtcaataaaattattggcgcgccatcc	CRISPR spacer
aaatcgtcgataacattattggcgaatatgac	Protospacer
********.**** ********** ..    *

41. spacer 3.3|992037|32|CP007216|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019765 (Borreliella burgdorferi strain B31_NRZ isolate B31 plasmid p_lp54, complete sequence) position: , mismatch: 9, identity: 0.719

aaatcgtcaataaaattattggcgcgccatcc	CRISPR spacer
aaatcgtcgataacattattggcgaatatgac	Protospacer
********.**** ********** ..    *

42. spacer 3.3|992037|32|CP007216|CRISPRCasFinder,CRT,PILER-CR matches to NC_011784 (Borreliella burgdorferi ZS7 plasmid ZS7_lp54, complete sequence) position: , mismatch: 9, identity: 0.719

aaatcgtcaataaaattattggcgcgccatcc	CRISPR spacer
aaatcgtcgataacattattggcgaatatgac	Protospacer
********.**** ********** ..    *

43. spacer 3.3|992037|32|CP007216|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017218 (Borreliella burgdorferi strain B331 plasmid B331_lp54, complete sequence) position: , mismatch: 9, identity: 0.719

aaatcgtcaataaaattattggcgcgccatcc	CRISPR spacer
aaatcgtcgataacattattggcgaatatgac	Protospacer
********.**** ********** ..    *

44. spacer 3.3|992037|32|CP007216|CRISPRCasFinder,CRT,PILER-CR matches to NC_013130 (Borreliella burgdorferi N40 plasmid N40_lp54, complete sequence) position: , mismatch: 9, identity: 0.719

aaatcgtcaataaaattattggcgcgccatcc	CRISPR spacer
aaatcgtcgataacattattggcgaatatgac	Protospacer
********.**** ********** ..    *

45. spacer 3.3|992037|32|CP007216|CRISPRCasFinder,CRT,PILER-CR matches to NC_013129 (Borreliella burgdorferi JD1 plasmid JD1_lp54, complete sequence) position: , mismatch: 9, identity: 0.719

aaatcgtcaataaaattattggcgcgccatcc	CRISPR spacer
aaatcgtcgataacattattggcgaatatgac	Protospacer
********.**** ********** ..    *

46. spacer 3.3|992037|32|CP007216|CRISPRCasFinder,CRT,PILER-CR matches to NC_001857 (Borreliella burgdorferi B31 plasmid lp54, complete sequence) position: , mismatch: 9, identity: 0.719

aaatcgtcaataaaattattggcgcgccatcc	CRISPR spacer
aaatcgtcgataacattattggcgaatatgac	Protospacer
********.**** ********** ..    *

47. spacer 3.6|992220|32|CP007216|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013071 (Sphingobium indicum B90A plasmid pSRL1, complete sequence) position: , mismatch: 9, identity: 0.719

atttttgcctccagcgcgaacagcatggcgcc	CRISPR spacer
tcccgcgcccccagcgcgaacagcatggccgc	Protospacer
 ... .***.*******************  *

48. spacer 3.6|992220|32|CP007216|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016593 (Ketogulonicigenium vulgare strain SKV plasmid pKvSKV1, complete sequence) position: , mismatch: 9, identity: 0.719

atttttgcctccagcgcgaacagcatggcgcc	CRISPR spacer
agaagcgccttcagcgcgaacaggatggcagc	Protospacer
*    .****.************ *****. *

49. spacer 3.6|992220|32|CP007216|CRISPRCasFinder,CRT,PILER-CR matches to NC_017386 (Ketogulonicigenium vulgare WSH-001 plasmid 1, complete sequence) position: , mismatch: 9, identity: 0.719

atttttgcctccagcgcgaacagcatggcgcc	CRISPR spacer
agaagcgccttcagcgcgaacaggatggcagc	Protospacer
*    .****.************ *****. *

50. spacer 3.6|992220|32|CP007216|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032328 (Azospirillum brasilense strain MTCC4035 plasmid p7, complete sequence) position: , mismatch: 9, identity: 0.719

atttttgcctccagcgcgaacagcatggcgcc	CRISPR spacer
aacagcgccgccagcgcgaacagcatcgccgc	Protospacer
* .  .*** **************** **  *

51. spacer 3.6|992220|32|CP007216|CRISPRCasFinder,CRT,PILER-CR matches to NC_014621 (Ketogulonicigenium vulgare Y25 plasmid pYP1, complete sequence) position: , mismatch: 9, identity: 0.719

atttttgcctccagcgcgaacagcatggcgcc	CRISPR spacer
agaagcgccttcagcgcgaacaggatggcagc	Protospacer
*    .****.************ *****. *

52. spacer 3.6|992220|32|CP007216|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012909 (Ketogulonicigenium vulgare strain Hbe602 plasmid 1, complete sequence) position: , mismatch: 9, identity: 0.719

atttttgcctccagcgcgaacagcatggcgcc	CRISPR spacer
agaagcgccttcagcgcgaacaggatggcagc	Protospacer
*    .****.************ *****. *

53. spacer 3.6|992220|32|CP007216|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP035512 (Haematobacter massiliensis strain OT1 plasmid pOT1-2, complete sequence) position: , mismatch: 9, identity: 0.719

atttttgcctccagcgcgaacagcatggcgcc	CRISPR spacer
agaagcgccttcagcgcgaacaggatggcagc	Protospacer
*    .****.************ *****. *

54. spacer 3.10|992464|32|CP007216|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022925 (Klebsiella pneumoniae strain ST307PT01 plasmid pJYC01B) position: , mismatch: 9, identity: 0.719

tggccggagcctaaagacggggagccgcgttt	CRISPR spacer
tggccggagccgaaagacggggaac-------	Protospacer
*********** ***********.*

55. spacer 3.17|992891|32|CP007216|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP050096 (Rhizobium leguminosarum bv. trifolii strain 22B plasmid pRL22b3, complete sequence) position: , mismatch: 9, identity: 0.719

ttgaata---cgtcgcgataccagtcactccggaa	CRISPR spacer
---agtgtgccgtcgcgataccagtcagtcaggcc	Protospacer
   *.*.   ***************** ** **

56. spacer 3.17|992891|32|CP007216|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP050102 (Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b2, complete sequence) position: , mismatch: 9, identity: 0.719

ttgaata---cgtcgcgataccagtcactccggaa	CRISPR spacer
---agtgtgccgtcgcgataccagtcagtcaggcc	Protospacer
   *.*.   ***************** ** **

57. spacer 3.17|992891|32|CP007216|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP050107 (Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b1, complete sequence) position: , mismatch: 9, identity: 0.719

ttgaata---cgtcgcgataccagtcactccggaa	CRISPR spacer
---agtgtgccgtcgcgataccagtcagtcaggcc	Protospacer
   *.*.   ***************** ** **

58. spacer 3.17|992891|32|CP007216|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP050112 (Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b5, complete sequence) position: , mismatch: 9, identity: 0.719

ttgaata---cgtcgcgataccagtcactccggaa	CRISPR spacer
---agtgtgccgtcgcgataccagtcagtcaggcc	Protospacer
   *.*.   ***************** ** **

59. spacer 3.17|992891|32|CP007216|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP048285 (Rhizobium leguminosarum bv. viciae 248 plasmid pRle248a, complete sequence) position: , mismatch: 9, identity: 0.719

ttgaata---cgtcgcgataccagtcactccggaa	CRISPR spacer
---agtgtgccgtcgcgataccagtcagtcaggcc	Protospacer
   *.*.   ***************** ** **

60. spacer 2.5|975274|32|CP007216|PILER-CR,CRISPRCasFinder,CRT matches to KF751793 (Campylobacter phage CJIE4-1, complete genome) position: , mismatch: 10, identity: 0.688

acgttttaacagggtaatatttacttaattat	CRISPR spacer
ttgcattagcagtgtaatatttacttaaagca	Protospacer
 .*. ***.*** ***************

61. spacer 2.10|975579|32|CP007216|CRISPRCasFinder,CRT matches to NZ_CP054615 (Azospirillum oryzae strain KACC 14407 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

cgttcatcggcagcgtcacgcaatatgaagat	CRISPR spacer
acatcatcggcatcgtcacgccatatccggca	Protospacer
   ********* ******** ****  .*

62. spacer 3.1|991915|32|CP007216|CRISPRCasFinder,CRT matches to NZ_CP006373 (Aureimonas sp. AU20 plasmid pAU20f, complete sequence) position: , mismatch: 10, identity: 0.688

ccagcctgtagcgtgggggcgttgggtagcct	CRISPR spacer
gaacgtcttagcgtcggggcgttgggtcgcca	Protospacer
  *  .. ****** ************ ***

63. spacer 3.2|991976|32|CP007216|CRISPRCasFinder,CRT matches to CP009871 (Pantoea sp. PSNIH2 plasmid pPSP-cd6, complete sequence) position: , mismatch: 10, identity: 0.688

catcttttacgcatgttgatgtgcgttcaaat	CRISPR spacer
ccgattttacgcatgttgctgcgcgttgccgg	Protospacer
*   ************** **.*****   .

64. spacer 3.6|992220|32|CP007216|CRISPRCasFinder,CRT,PILER-CR matches to NC_019849 (Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence) position: , mismatch: 10, identity: 0.688

atttttgcctccagcgcgaacagcatggcgcc	CRISPR spacer
agcaggcggtccagcgcgaccagcagggcgcc	Protospacer
* .      ********** ***** ******

65. spacer 3.6|992220|32|CP007216|CRISPRCasFinder,CRT,PILER-CR matches to NC_003078 (Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence) position: , mismatch: 10, identity: 0.688

atttttgcctccagcgcgaacagcatggcgcc	CRISPR spacer
agcaggcggtccagcgcgaccagcagggcgcc	Protospacer
* .      ********** ***** ******

66. spacer 3.6|992220|32|CP007216|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019586 (Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence) position: , mismatch: 10, identity: 0.688

atttttgcctccagcgcgaacagcatggcgcc	CRISPR spacer
agcaggcggtccagcgcgaccagcagggcgcc	Protospacer
* .      ********** ***** ******

67. spacer 3.6|992220|32|CP007216|CRISPRCasFinder,CRT,PILER-CR matches to NC_017326 (Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence) position: , mismatch: 10, identity: 0.688

atttttgcctccagcgcgaacagcatggcgcc	CRISPR spacer
agcaggcggtccagcgcgaccagcagggcgcc	Protospacer
* .      ********** ***** ******

68. spacer 3.6|992220|32|CP007216|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021799 (Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence) position: , mismatch: 10, identity: 0.688

atttttgcctccagcgcgaacagcatggcgcc	CRISPR spacer
agcaggcggtccagcgcgaccagcagggcgcc	Protospacer
* .      ********** ***** ******

69. spacer 3.6|992220|32|CP007216|CRISPRCasFinder,CRT,PILER-CR matches to NC_017323 (Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence) position: , mismatch: 10, identity: 0.688

atttttgcctccagcgcgaacagcatggcgcc	CRISPR spacer
agcaggcggtccagcgcgaccagcagggcgcc	Protospacer
* .      ********** ***** ******

70. spacer 3.6|992220|32|CP007216|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009146 (Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence) position: , mismatch: 10, identity: 0.688

atttttgcctccagcgcgaacagcatggcgcc	CRISPR spacer
agcaggcggtccagcgcgaccagcagggcgcc	Protospacer
* .      ********** ***** ******

71. spacer 3.6|992220|32|CP007216|CRISPRCasFinder,CRT,PILER-CR matches to NC_018701 (Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence) position: , mismatch: 10, identity: 0.688

atttttgcctccagcgcgaacagcatggcgcc	CRISPR spacer
agcaggcggtccagcgcgaccagcagggcgcc	Protospacer
* .      ********** ***** ******

72. spacer 3.6|992220|32|CP007216|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021828 (Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence) position: , mismatch: 10, identity: 0.688

atttttgcctccagcgcgaacagcatggcgcc	CRISPR spacer
agcaggcggtccagcgcgaccagcagggcgcc	Protospacer
* .      ********** ***** ******

73. spacer 3.6|992220|32|CP007216|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP030263 (Ensifer adhaerens strain Corn53 plasmid AA, complete sequence) position: , mismatch: 10, identity: 0.688

atttttgcctccagcgcgaacagcatggcgcc	CRISPR spacer
aacaggcggtccagcgcgaccagcagggcgcc	Protospacer
* .      ********** ***** ******

74. spacer 3.6|992220|32|CP007216|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021802 (Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence) position: , mismatch: 10, identity: 0.688

atttttgcctccagcgcgaacagcatggcgcc	CRISPR spacer
agcaggcggtccagcgcgaccagcagggcgcc	Protospacer
* .      ********** ***** ******

75. spacer 3.6|992220|32|CP007216|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021820 (Sinorhizobium meliloti strain M162 plasmid psymB, complete sequence) position: , mismatch: 10, identity: 0.688

atttttgcctccagcgcgaacagcatggcgcc	CRISPR spacer
agcaggcggtccagcgcgaccagcagggcgcc	Protospacer
* .      ********** ***** ******

76. spacer 3.6|992220|32|CP007216|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021831 (Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence) position: , mismatch: 10, identity: 0.688

atttttgcctccagcgcgaacagcatggcgcc	CRISPR spacer
agcaggcggtccagcgcgaccagcagggcgcc	Protospacer
* .      ********** ***** ******

77. spacer 3.6|992220|32|CP007216|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021823 (Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence) position: , mismatch: 10, identity: 0.688

atttttgcctccagcgcgaacagcatggcgcc	CRISPR spacer
agcaggcggtccagcgcgaccagcagggcgcc	Protospacer
* .      ********** ***** ******

78. spacer 3.6|992220|32|CP007216|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021814 (Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence) position: , mismatch: 10, identity: 0.688

atttttgcctccagcgcgaacagcatggcgcc	CRISPR spacer
agcaggcggtccagcgcgaccagcagggcgcc	Protospacer
* .      ********** ***** ******

79. spacer 3.6|992220|32|CP007216|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021795 (Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence) position: , mismatch: 10, identity: 0.688

atttttgcctccagcgcgaacagcatggcgcc	CRISPR spacer
agcaggcggtccagcgcgaccagcagggcgcc	Protospacer
* .      ********** ***** ******

80. spacer 3.6|992220|32|CP007216|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021810 (Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence) position: , mismatch: 10, identity: 0.688

atttttgcctccagcgcgaacagcatggcgcc	CRISPR spacer
agcaggcggtccagcgcgaccagcagggcgcc	Protospacer
* .      ********** ***** ******

81. spacer 3.6|992220|32|CP007216|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021806 (Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence) position: , mismatch: 10, identity: 0.688

atttttgcctccagcgcgaacagcatggcgcc	CRISPR spacer
agcaggcggtccagcgcgaccagcagggcgcc	Protospacer
* .      ********** ***** ******

82. spacer 3.6|992220|32|CP007216|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021218 (Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence) position: , mismatch: 10, identity: 0.688

atttttgcctccagcgcgaacagcatggcgcc	CRISPR spacer
agcaggcggtccagcgcgaccagcagggcgcc	Protospacer
* .      ********** ***** ******

83. spacer 3.6|992220|32|CP007216|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026527 (Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence) position: , mismatch: 10, identity: 0.688

atttttgcctccagcgcgaacagcatggcgcc	CRISPR spacer
agcaggcggtccagcgcgaccagcagggcgcc	Protospacer
* .      ********** ***** ******

84. spacer 3.6|992220|32|CP007216|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP014797 (Salipiger profundus strain JLT2016 plasmid pTPRO1, complete sequence) position: , mismatch: 10, identity: 0.688

atttttgcctccagcgcgaacagcatggcgcc	CRISPR spacer
gtcccggcctcctgcgcgatcagcatggcaag	Protospacer
.*... ****** ****** *********.

85. spacer 3.6|992220|32|CP007216|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019484 (Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence) position: , mismatch: 10, identity: 0.688

atttttgcctccagcgcgaacagcatggcgcc	CRISPR spacer
agcaggcggtccagcgcgaccagcagggcgcc	Protospacer
* .      ********** ***** ******

86. spacer 3.6|992220|32|CP007216|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP043441 (Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

atttttgcctccagcgcgaacagcatggcgcc	CRISPR spacer
tgccccgggtccacctcgaacagcatggcgcc	Protospacer
  ....*  **** * ****************

87. spacer 3.6|992220|32|CP007216|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019487 (Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence) position: , mismatch: 10, identity: 0.688

atttttgcctccagcgcgaacagcatggcgcc	CRISPR spacer
agcaggcggtccagcgcgaccagcagggcgcc	Protospacer
* .      ********** ***** ******

88. spacer 3.6|992220|32|CP007216|CRISPRCasFinder,CRT,PILER-CR matches to NC_020560 (Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence) position: , mismatch: 10, identity: 0.688

atttttgcctccagcgcgaacagcatggcgcc	CRISPR spacer
agcaggcggtccagcgcgaccagcagggcgcc	Protospacer
* .      ********** ***** ******

89. spacer 3.6|992220|32|CP007216|CRISPRCasFinder,CRT,PILER-CR matches to NC_016586 (Azospirillum lipoferum 4B plasmid AZO_p2, complete sequence) position: , mismatch: 10, identity: 0.688

atttttgcctccagcgcgaacagcatggcgcc	CRISPR spacer
ggcgtcagttccagcgcgtccagcatggcgcc	Protospacer
. . *.. .*********  ************

90. spacer 3.11|992525|32|CP007216|CRISPRCasFinder,CRT,PILER-CR matches to NC_005262 (Burkholderia cepacia phage Bcep22, complete genome) position: , mismatch: 10, identity: 0.688

gggggtgataaccgcctcgctgaacgctacgc	CRISPR spacer
ctcggtgataacggccttgctgaacgcggtcg	Protospacer
   ********* ****.********* ..

91. spacer 3.11|992525|32|CP007216|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015746 (Shinella sp. HZN7 plasmid pShin-10, complete sequence) position: , mismatch: 10, identity: 0.688

gggggtgataaccgcctcgctgaacgctacgc	CRISPR spacer
cagcccttgaaccgccaggctgaacgctacgc	Protospacer
 .*  .   *******  **************

92. spacer 3.11|992525|32|CP007216|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019446 (Kosakonia cowanii JCM 10956 = DSM 18146 strain 888-76 plasmid p888-76-1, complete sequence) position: , mismatch: 10, identity: 0.688

gggggtgataaccgcctcgctgaacgctacgc	CRISPR spacer
tgatgtgataaccacatcgctgaacgccttca	Protospacer
 *. *********.* ***********. .

93. spacer 3.11|992525|32|CP007216|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032923 (Agrobacterium tumefaciens strain 1D1108 plasmid pAt1D1108a, complete sequence) position: , mismatch: 10, identity: 0.688

gggggtgataaccgcctcgctgaacgctacgc	CRISPR spacer
ttcaccggcaaccgcatcgctgtacgctacgc	Protospacer
   . .*..****** ****** *********

94. spacer 3.14|992708|32|CP007216|CRISPRCasFinder,CRT,PILER-CR matches to NC_019957 (Mycobacterium sp. JS623 plasmid pMYCSM01, complete sequence) position: , mismatch: 10, identity: 0.688

cattcgctcaatagcggcccgcgtggcggtga	CRISPR spacer
agcgcgctcaatagcggaccgcgcggcaacgg	Protospacer
 .. ************* *****.***...*.

95. spacer 3.18|992952|32|CP007216|CRISPRCasFinder,CRT matches to CP054927 (Streptomyces fulvissimus strain NA06532 plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.656

aggggcgttccgcagtcggcaagggctgaaaa	CRISPR spacer
tcgggcatcccgcagtcggcaagggtgcggcg	Protospacer
  ****.*.****************.  .. .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1225017 : 1271653

Salmonella_phage(27.91%)

integrase,head,tail,lysis

attL 1222750:1222764|attR 1257902:1257916

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1222750:1222764	attL	NA	NA	NA	NA
AJQ70713.1\|1225017_1226247_+\|integrase	integrase	H6WRW7	Salmonella_phage	6.4e-233	94.1
AWH56070.1\|1226224_1226509_-	excisionase	H6WRW8	Salmonella_phage	1.1e-42	87.2
AWH56071.1\|1226549_1226789_-	DUF4060 domain-containing protein	H6WRW9	Salmonella_phage	2.2e-36	97.5
AJQ70712.2\|1226831_1227989_-	enterohemolysin	S4TTE8	Salmonella_phage	1.6e-217	100.0
AJQ70711.1\|1227951_1231131_-	DNA breaking-rejoining protein	H6WRX1	Salmonella_phage	0.0e+00	68.1
AJQ70710.1\|1231271_1231607_-	hypothetical protein	NA	NA	NA	NA
AJQ70709.2\|1231682_1231889_-	cell division inhibitor protein	I6PBM9	Cronobacter_phage	3.0e-10	45.6
AJQ70708.2\|1231893_1232169_-	hypothetical protein	NA	NA	NA	NA
AWH56072.1\|1232429_1232609_+	hypothetical protein	NA	NA	NA	NA
AWH56073.1\|1232553_1232742_-	hypothetical protein	NA	NA	NA	NA
AWH56074.1\|1233052_1233478_-	transcriptional regulator	K7PH71	Enterobacterial_phage	1.2e-13	56.3
AWH56075.1\|1233574_1233829_+	XRE family transcriptional regulator	K7PKH4	Enterobacteria_phage	1.2e-16	59.4
AJQ70706.1\|1233815_1234310_+	hypothetical protein	NA	NA	NA	NA
AJQ70705.1\|1234356_1235364_+	DUF1376 domain-containing protein	A0A0U2RT81	Escherichia_phage	7.6e-123	67.5
AJQ70704.2\|1235356_1235818_+	replication protein	A0A0U2JGJ0	Escherichia_phage	7.8e-67	74.8
AWH56076.1\|1235832_1236228_+	DUF977 domain-containing protein	A0A088CBK9	Shigella_phage	1.7e-17	38.1
AJQ70703.2\|1236514_1237645_-	GGDEF domain-containing protein	NA	NA	NA	NA
AJQ70702.2\|1238041_1240021_+	hypothetical protein	A0A2P0VMX1	Tetraselmis_virus	1.9e-162	46.3
AWH56077.1\|1240038_1240230_-	hypothetical protein	NA	NA	NA	NA
AJQ70701.2\|1240652_1240958_+	hypothetical protein	NA	NA	NA	NA
AJQ70700.1\|1241021_1241621_+	DUF1367 domain-containing protein	A0A0U2RT94	Escherichia_phage	1.2e-96	82.9
AJQ70699.1\|1241617_1241812_+	hypothetical protein	S4TNP0	Salmonella_phage	6.1e-13	61.5
AJQ70698.2\|1241793_1242090_+	hypothetical protein	K7P7Q1	Enterobacteria_phage	1.1e-34	79.8
AJQ70697.1\|1242086_1242641_+	DUF1133 domain-containing protein	A0A0U2S606	Escherichia_phage	1.7e-63	64.6
AWH56078.1\|1242586_1242784_-	hypothetical protein	NA	NA	NA	NA
AJQ70696.2\|1242847_1243384_+	hypothetical protein	NA	NA	NA	NA
AJQ70695.2\|1243516_1243819_+	alpha/beta hydrolase	NA	NA	NA	NA
AJQ70694.1\|1243796_1244336_+	lysozyme	K7PLY1	Enterobacteria_phage	5.7e-77	71.2
AJQ70692.1\|1244436_1244901_+\|lysis	lysis protein	A0A0M4RD57	Salmonella_phage	6.3e-56	81.7
AJQ70691.2\|1245108_1245291_+	hypothetical protein	NA	NA	NA	NA
AJQ70690.2\|1245320_1245563_+	DUF2514 domain-containing protein	NA	NA	NA	NA
AWH56079.1\|1245588_1246149_-	hypothetical protein	NA	NA	NA	NA
AJQ70689.1\|1246236_1246863_+	hypothetical protein	A0A0M3ULJ9	Salmonella_phage	2.3e-106	98.1
AJQ70688.1\|1246865_1248485_+	TerL protein	A0A0M5M1R6	Salmonella_phage	3.9e-262	81.4
AJQ70687.1\|1248484_1250005_+	DUF1073 domain-containing protein	A0A2R3UAL5	Myoviridae_environmental_samples	1.2e-103	43.3
AJQ70686.1\|1250045_1250735_+\|head	phage head morphogenesis protein	H9C0V1	Aeromonas_phage	4.5e-58	49.6
AJQ70685.1\|1250731_1252078_+	DUF2213 domain-containing protein	A0A219YCD3	Aeromonas_phage	9.3e-68	36.4
AJQ70684.2\|1252079_1252562_+	hypothetical protein	K4HYQ5	Acinetobacter_phage	2.2e-19	40.6
AJQ70683.2\|1252561_1253590_+	DUF2184 domain-containing protein	A0A219YBB0	Aeromonas_phage	2.3e-82	48.7
AJQ70682.1\|1253593_1253941_+	hypothetical protein	H9C0V9	Aeromonas_phage	3.9e-10	40.2
AJQ70681.1\|1253947_1254394_+	DUF4054 domain-containing protein	A0A068CGG9	Acinetobacter_phage	2.3e-15	40.6
AJQ70680.1\|1254387_1254972_+	hypothetical protein	H9C0W2	Aeromonas_phage	2.1e-16	30.3
AJQ70679.1\|1254968_1255334_+	hypothetical protein	A0A077KAW7	Edwardsiella_phage	3.0e-21	40.5
AJQ70678.2\|1255318_1255864_+	hypothetical protein	NA	NA	NA	NA
AJQ70677.1\|1255844_1257329_+	DUF3383 domain-containing protein	A0A077KGV4	Edwardsiella_phage	5.2e-96	41.0
AJQ70676.1\|1257329_1257776_+	hypothetical protein	Q2NPD1	Xanthomonas_phage	4.8e-21	40.4
AJQ70675.1\|1257775_1258180_+	hypothetical protein	H9C0W7	Aeromonas_phage	1.8e-19	44.8
1257902:1257916	attR	NA	NA	NA	NA
AJQ70674.1\|1258221_1258404_+	transcription elongation factor GreA	NA	NA	NA	NA
AJQ70673.1\|1258387_1260559_+	transglycosylase	A0A0M4REK7	Salmonella_phage	1.4e-49	67.1
AJQ70672.1\|1260555_1261266_+	hypothetical protein	A0A077KGW3	Edwardsiella_phage	4.7e-26	34.3
AWH56080.1\|1261265_1261568_+	hypothetical protein	A0A077K9U4	Edwardsiella_phage	7.0e-24	49.5
AJQ70670.1\|1261564_1262434_+	hypothetical protein	A0A077KC17	Edwardsiella_phage	9.1e-32	32.7
AJQ70669.1\|1262414_1263092_+	oxidoreductase	A0A077KAY0	Edwardsiella_phage	5.4e-32	36.4
AJQ70668.1\|1263104_1263461_+	hypothetical protein	A0A077KCA1	Edwardsiella_phage	1.6e-19	49.1
AJQ70667.1\|1263457_1264699_+	hypothetical protein	A0A077KGW9	Edwardsiella_phage	1.2e-101	49.9
AJQ70666.1\|1264700_1265303_+	DUF2612 domain-containing protein	A0A2R3UAM9	Myoviridae_environmental_samples	3.3e-33	38.9
AJQ70665.1\|1265292_1266747_+	short-chain dehydrogenase	A0A0M3ULF6	Salmonella_phage	2.2e-46	74.5
AJQ70664.1\|1266746_1267325_+\|tail	tail fiber assembly protein	A0A0M4RTP2	Salmonella_phage	6.3e-98	92.6
AJQ70663.2\|1268287_1271653_+	DUF4765 domain-containing protein	A0A0N7KZG3	Stx2-converting_phage	1.6e-310	50.5

DBSCAN-SWA_2

1739919 : 1749090

Enterobacteria_phage(66.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AJQ70226.1\|1739919_1740867_+	ATP-binding protein	F2Y1V5	Organic_Lake_phycodnavirus	3.7e-10	27.8
AJQ70225.1\|1740850_1741582_+	ABC transporter permease	NA	NA	NA	NA
AWH56107.1\|1741562_1741670_-	hypothetical protein	NA	NA	NA	NA
AJQ70224.1\|1741729_1742461_-	transcriptional regulator	Q9EYF2	Enterobacteria_phage	4.5e-101	87.9
AJQ70223.2\|1742683_1744369_+	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	4.8e-279	91.3
AJQ70222.1\|1744365_1745085_+	DNA-binding response regulator	NA	NA	NA	NA
AJQ70221.1\|1745131_1745599_+	DUF1456 domain-containing protein	Q9EYF4	Enterobacteria_phage	3.9e-74	90.3
AJQ70220.2\|1745655_1746186_-	DUF1307 domain-containing protein	NA	NA	NA	NA
AJQ70219.1\|1746357_1746816_-	lipoprotein	Q9EYF5	Enterobacteria_phage	8.4e-53	72.5
AJQ70218.1\|1747056_1749090_-\|tRNA	methionine--tRNA ligase	A0A1V0SDF2	Indivirus	1.0e-54	27.6

DBSCAN-SWA_3

1823588 : 1834095

Enterobacteria_phage(37.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AJQ70152.1\|1823588_1824992_+	colanic acid biosynthesis protein WcaM	A0A291LBB9	Klebsiella_phage	3.1e-21	26.5
AJQ70151.2\|1825169_1826063_+	UTP--glucose-1-phosphate uridylyltransferase	A0A127AW70	Bacillus_phage	4.8e-44	42.2
AJQ70150.1\|1826439_1827525_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	1.2e-102	53.9
AJQ70149.2\|1827524_1828424_+	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	5.1e-30	36.0
AJQ70148.2\|1828471_1829350_+	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	5.1e-107	64.8
AWH56112.1\|1829350_1829902_+	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	1.0e-52	58.0
AJQ70147.1\|1829907_1830888_+	CDP-6-deoxy-delta-3,4-glucoseen reductase	NA	NA	NA	NA
AJQ70146.1\|1830897_1831671_+	glucose-1-phosphate cytidylyltransferase	NA	NA	NA	NA
AJQ70145.1\|1831675_1832755_+	CDP-glucose 4,6-dehydratase	A0A222YY99	Synechococcus_phage	1.3e-16	24.5
AJQ70144.1\|1832781_1834095_+	LPS biosynthesis protein	H8ZJ36	Ostreococcus_tauri_virus	7.0e-52	35.1

DBSCAN-SWA_4

1927238 : 1934655

Morganella_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AJQ70045.1\|1927238_1927763_-	peptidase	G9L6C4	Escherichia_phage	1.3e-36	77.7
AWH56118.1\|1928410_1928701_-	DUF4102 domain-containing protein	B7SYF8	Stenotrophomonas_phage	2.3e-08	50.9
AJQ70043.1\|1929072_1929870_-	protein MtfA	NA	NA	NA	NA
AJQ70042.1\|1930350_1930512_+	hypothetical protein	NA	NA	NA	NA
AWH56119.1\|1930638_1931058_+	DNA polymerase V subunit UmuD	A0A1W6JNS2	Morganella_phage	8.5e-36	60.5
AJQ70040.1\|1931060_1932329_+	translesion error-prone DNA polymerase V subunit UmuC	I6RSM4	Salmonella_phage	1.3e-225	91.7
AJQ70039.1\|1932783_1932996_+	cold-shock protein	A0A1W6JNX5	Morganella_phage	5.1e-21	70.0
AWH56120.1\|1932982_1933186_+	cold-shock protein	NA	NA	NA	NA
AJQ70038.1\|1933443_1934655_-	porin OmpS1	Q1MVN1	Enterobacteria_phage	1.3e-108	56.0

DBSCAN-SWA_5

2027545 : 2081798

Enterobacteria_phage(25.0%)

integrase,protease,transposase,tail

attL 2046065:2046080|attR 2063539:2063554

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWH56126.1\|2027545_2028801_-\|transposase	IS3 family transposase	Q6H9S3	Enterobacteria_phage	4.8e-18	34.5
AJQ69927.1\|2028935_2030378_-	pyruvate kinase II	NA	NA	NA	NA
AJQ69926.1\|2030501_2031371_-	transcriptional regulator HexR	NA	NA	NA	NA
AWH56127.1\|2031554_2031740_-	hypothetical protein	NA	NA	NA	NA
AJQ69925.1\|2031712_2033188_+	glucose-6-phosphate dehydrogenase	H6WFS4	Cyanophage	2.6e-79	37.5
AJQ69924.1\|2033422_2035234_+	phosphogluconate dehydratase	NA	NA	NA	NA
AJQ69923.1\|2035271_2035913_+	keto-deoxy-phosphogluconate aldolase	NA	NA	NA	NA
AJQ69922.1\|2036012_2037191_-	phosphoribosylglycinamide formyltransferase 2	NA	NA	NA	NA
AJQ69921.1\|2037321_2037612_+	damage-inducible protein YebG	NA	NA	NA	NA
AJQ69920.1\|2037679_2038033_+	hypothetical protein	NA	NA	NA	NA
AJQ69919.1\|2038126_2038786_+	DUF533 domain-containing protein	NA	NA	NA	NA
AJQ69918.2\|2038998_2041050_+	oligopeptidase B	NA	NA	NA	NA
AJQ69917.1\|2041084_2041783_-	exodeoxyribonuclease X	Q6UAU3	Klebsiella_phage	2.8e-07	40.4
AJQ69916.1\|2041806_2042463_-	carbon-nitrogen hydrolase family protein	NA	NA	NA	NA
AJQ69915.1\|2042570_2042801_-	DNA polymerase III subunit theta	H9C187	Pectobacterium_phage	2.9e-14	60.3
AJQ69914.2\|2042938_2043313_+	CopC domain-containing protein YobA	NA	NA	NA	NA
AJQ69913.2\|2043313_2044189_+	hypothetical protein	NA	NA	NA	NA
AJQ69912.1\|2044205_2044559_+	DUF2511 domain-containing protein	NA	NA	NA	NA
AWH56334.1\|2044616_2044736_+	hypothetical protein	NA	NA	NA	NA
AJQ69911.2\|2044922_2045777_-\|integrase	integrase	A0A2H4IYC8	uncultured_Caudovirales_phage	3.6e-73	50.9
AJQ69910.2\|2045836_2046331_-	RecE	A0A0U2I1R6	Escherichia_phage	8.2e-22	68.9
2046065:2046080	attL	NA	NA	NA	NA
AWH56128.1\|2046520_2046751_+	lytic enzyme	Q8HA86	Salmonella_phage	6.1e-28	93.7
AJQ69909.1\|2046804_2047338_+	DUF2514 domain-containing protein	A0A291LBG9	Klebsiella_phage	1.4e-11	48.3
AJQ69908.1\|2047594_2047762_-	lytic enzyme	NA	NA	NA	NA
AJQ69907.1\|2047826_2048015_-	hypothetical protein	NA	NA	NA	NA
AJQ69906.1\|2048069_2048561_+	DUF1441 domain-containing protein	Q9EYD0	Enterobacteria_phage	5.8e-44	57.5
AJQ69905.1\|2049113_2051168_+	shikimate transporter	E5G6P0	Salmonella_phage	1.3e-73	47.5
AWH56129.1\|2051264_2051465_-	phage virulence factor	NA	NA	NA	NA
AWH56130.1\|2051655_2051772_-\|tail	phage tail protein	NA	NA	NA	NA
AJQ69904.1\|2052034_2052160_+	arsenic transporter	NA	NA	NA	NA
AWH56131.1\|2052288_2052555_+	hypothetical protein	NA	NA	NA	NA
AWH56132.1\|2053307_2053922_-	disulfide bond formation protein B	NA	NA	NA	NA
AJQ69901.2\|2053931_2054090_-	hypothetical protein	NA	NA	NA	NA
AJQ69900.1\|2054222_2055137_-	protein PagO	NA	NA	NA	NA
AJQ69897.2\|2056510_2056807_+	DUF4113 domain-containing protein	I6RSM4	Salmonella_phage	5.3e-16	83.7
AJQ69896.2\|2057072_2057441_-\|integrase	integrase	K7PHK0	Enterobacteria_phage	5.4e-18	39.8
AWH56133.1\|2058904_2059045_-	hypothetical protein	NA	NA	NA	NA
AWH56134.1\|2059210_2059480_-	hypothetical protein	Q6UAV5	Klebsiella_phage	1.5e-06	39.0
AJQ69892.1\|2059526_2059721_+	hypothetical protein	NA	NA	NA	NA
AJQ69891.1\|2059849_2060269_+	N-acetyltransferase	NA	NA	NA	NA
AJQ69886.2\|2063341_2064355_-	acyltransferase	NA	NA	NA	NA
2063539:2063554	attR	NA	NA	NA	NA
AJQ69884.1\|2065051_2065255_-	fimbrial protein	NA	NA	NA	NA
AWH56135.1\|2065438_2065723_-	hypothetical protein	NA	NA	NA	NA
AJQ69882.1\|2067238_2067715_-	hypothetical protein	NA	NA	NA	NA
AJQ69881.1\|2068043_2068439_-	DUF1398 domain-containing protein	C6ZCX4	Enterobacteria_phage	7.0e-16	32.8
AWH56136.1\|2069122_2069845_+	SPI-1 type III secretion system guanine nucleotide exchange factor SopE2	NA	NA	NA	NA
AJQ69877.1\|2070129_2070294_+	hypothetical protein	NA	NA	NA	NA
AJQ69875.2\|2070517_2071168_+	protein-serine/threonine phosphatase	A0A222YWF0	Escherichia_phage	9.4e-58	50.9
AJQ69874.2\|2071186_2071378_-	DUF1482 domain-containing protein	NA	NA	NA	NA
AJQ69873.1\|2071488_2071728_-	DUF1480 domain-containing protein	NA	NA	NA	NA
AJQ69872.2\|2071842_2073282_-	16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF	NA	NA	NA	NA
AJQ69871.1\|2073359_2075999_-	MCE family protein	NA	NA	NA	NA
AJQ69870.1\|2075961_2077245_-	paraquat-inducible protein A	NA	NA	NA	NA
AJQ69869.2\|2077286_2077871_+	Free methionine-R-sulfoxide reductase	NA	NA	NA	NA
AJQ69868.1\|2077968_2078655_+	RNA chaperone ProQ	NA	NA	NA	NA
AJQ69867.2\|2078674_2080723_+\|tail,protease	tail-specific protease	A0A0R6PIZ1	Moraxella_phage	8.0e-87	33.5
AJQ69866.1\|2080916_2081798_+\|protease	protease HtpX	NA	NA	NA	NA

DBSCAN-SWA_6

2842303 : 2891338

Salmonella_phage(41.67%)

protease,holin,integrase,tail

attL 2874497:2874511|attR 2891373:2891387

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWH56197.1\|2842303_2842984_+\|protease	type III secretion system effector protease PipA	Q9MBM0	Phage_Gifsy-2	1.6e-84	72.4
AJQ69092.1\|2843603_2844263_+	transmembrane protein	A0A2H4JFM9	uncultured_Caudovirales_phage	2.7e-44	52.4
AJQ69091.1\|2844349_2844679_+	sulfurtransferase TusE	NA	NA	NA	NA
AJQ69090.1\|2844675_2844957_-	acylphosphatase	NA	NA	NA	NA
AJQ69089.2\|2845005_2845785_-	AraC family transcriptional regulator	NA	NA	NA	NA
AJQ69088.1\|2845810_2846359_-	YbhB/YbcL family Raf kinase inhibitor-like protein	NA	NA	NA	NA
AJQ69087.1\|2846573_2847785_+	ribosomal RNA large subunit methyltransferase I	NA	NA	NA	NA
AJQ69086.1\|2847842_2848160_+	heat-shock protein HspQ	NA	NA	NA	NA
AJQ69085.1\|2848204_2848621_-	CoA-binding protein	NA	NA	NA	NA
AJQ69084.1\|2848791_2849454_+	DUF2057 domain-containing protein	NA	NA	NA	NA
AJQ69083.1\|2849548_2850007_+	methylglyoxal synthase	NA	NA	NA	NA
AJQ69082.1\|2850042_2852097_-	DNA helicase IV	A7KV33	Bacillus_phage	8.5e-20	27.6
AJQ69081.1\|2852220_2852667_+	YccF domain-containing protein	NA	NA	NA	NA
AJQ69080.1\|2852685_2854839_+	TIGR01666 family membrane protein	NA	NA	NA	NA
AJQ69079.1\|2854825_2855431_-	DNA transformation protein	NA	NA	NA	NA
AJQ69078.1\|2855647_2856157_+	cell division inhibitor SulA	NA	NA	NA	NA
AJQ69077.2\|2856513_2857566_+	porin OmpA	NA	NA	NA	NA
AJQ69076.1\|2857637_2858090_-	macrodomain Ter protein	NA	NA	NA	NA
AJQ69075.1\|2858275_2860036_+\|protease	Lon protease family protein	NA	NA	NA	NA
AJQ69074.1\|2860104_2860623_+	beta-hydroxydecanoyl-ACP dehydratase	NA	NA	NA	NA
AWH56198.1\|2860722_2860890_-	ribosome modulation factor	NA	NA	NA	NA
AJQ69072.2\|2861145_2861709_-	hypothetical protein	NA	NA	NA	NA
AJQ69071.1\|2861705_2863346_-	paraquat-inducible protein B	NA	NA	NA	NA
AJQ69070.2\|2863350_2864604_-	paraquat-inducible protein A	NA	NA	NA	NA
AJQ69068.1\|2864618_2866526_-	ABC transporter ATP-binding protein	A0A2K9L3Z8	Tupanvirus	5.4e-53	29.8
AJQ69067.1\|2866538_2868647_-	ribosomal RNA large subunit methyltransferase K/L	NA	NA	NA	NA
AJQ69066.1\|2868745_2869855_+	hypothetical protein	NA	NA	NA	NA
AJQ69065.1\|2869851_2870394_-	cell division protein ZapC	NA	NA	NA	NA
AJQ69064.1\|2870559_2871570_-	quinone-dependent dihydroorotate dehydrogenase	NA	NA	NA	NA
AJQ69063.1\|2871777_2874390_-	aminopeptidase N	A0A0P0IY26	Acinetobacter_phage	6.3e-20	22.6
2874497:2874511	attL	NA	NA	NA	NA
AJQ69062.1\|2874816_2875023_+	DNA-damage-inducible protein I	S4TNM0	Salmonella_phage	1.8e-31	100.0
AJQ69061.1\|2875498_2876299_+	hypothetical protein	NA	NA	NA	NA
AJQ69059.2\|2876778_2877501_+	SPI-1 type III secretion system guanine nucleotide exchange factor SopE	NA	NA	NA	NA
AJQ69058.1\|2877697_2878279_-\|tail	tail fiber assembly protein	A0A0M4RTP2	Salmonella_phage	2.8e-93	88.0
AJQ69057.1\|2878278_2879730_-	short-chain dehydrogenase	E5G6P0	Salmonella_phage	1.7e-46	72.8
AJQ69056.1\|2879719_2880322_-	DUF2612 domain-containing protein	A0A2R3UAM9	Myoviridae_environmental_samples	3.3e-33	38.9
AJQ69055.1\|2880323_2881565_-	hypothetical protein	A0A077KGW9	Edwardsiella_phage	1.2e-101	49.9
AJQ69054.1\|2881561_2881918_-	hypothetical protein	A0A077KCA1	Edwardsiella_phage	1.6e-19	49.1
AJQ69053.1\|2881930_2882608_-	oxidoreductase	A0A077KAY0	Edwardsiella_phage	5.4e-32	36.4
AJQ69052.1\|2882588_2883458_-	hypothetical protein	A0A077KC17	Edwardsiella_phage	9.1e-32	32.7
AJQ69051.1\|2883454_2883757_-	hypothetical protein	A0A077K9U4	Edwardsiella_phage	7.0e-24	49.5
AJQ69050.2\|2883756_2884467_-	hypothetical protein	A0A077KGW3	Edwardsiella_phage	4.7e-26	34.3
AJQ69049.2\|2884483_2884813_-\|holin	phage holin, lambda family	A0A0M3ULK9	Salmonella_phage	5.8e-56	100.0
AJQ69048.2\|2885088_2885775_+\|protease	type III secretion system effector protease GogA	Q9MBM2	Phage_Gifsy-1	1.4e-131	99.1
AWH56199.1\|2885989_2886178_-	hypothetical protein	NA	NA	NA	NA
AJQ69046.2\|2886667_2887357_-	antiterminator	I6PDF8	Cronobacter_phage	1.1e-59	52.4
AWH56200.1\|2887353_2887494_-	hypothetical protein	A0A0M5M7B2	Salmonella_phage	7.2e-08	78.9
AJQ69044.2\|2887490_2888102_-	recombination protein NinG	A0A0M4RU10	Salmonella_phage	1.8e-90	96.1
AJQ69043.2\|2888272_2889430_+	enterohemolysin	S4TTE8	Salmonella_phage	1.6e-217	100.0
AWH56201.1\|2889472_2889712_+	DUF4060 domain-containing protein	S4TR31	Salmonella_phage	2.0e-37	100.0
AWH56202.1\|2889752_2890001_+	excisionase	S4TND0	Salmonella_phage	4.7e-42	100.0
AJQ69041.2\|2890045_2891338_+\|integrase	integrase	S4TSP2	Salmonella_phage	2.2e-252	99.8
2891373:2891387	attR	NA	NA	NA	NA

DBSCAN-SWA_7

2962833 : 2970146

Ralstonia_phage(16.67%)

integrase,protease

attL 2957254:2957268|attR 2968882:2968896

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2957254:2957268	attL	NA	NA	NA	NA
AJQ68981.2\|2962833_2963211_+\|integrase	integrase	A0A077KET4	Ralstonia_phage	1.7e-19	40.2
AWH56207.1\|2963372_2963570_+	hypothetical protein	NA	NA	NA	NA
AJQ68980.2\|2963782_2966059_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	6.2e-165	42.3
AJQ68979.1\|2966089_2966410_-\|protease	ATP-dependent Clp protease adaptor ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	4.5e-13	45.7
AJQ68978.1\|2966733_2966955_+	cold shock domain protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	9.3e-18	64.2
AJQ68977.2\|2966909_2967104_-	hypothetical protein	NA	NA	NA	NA
AJQ68976.1\|2967084_2969031_-	macrolide ABC transporter permease/ATP-binding protein MacB	G9BWD6	Planktothrix_phage	2.0e-39	43.1
2968882:2968896	attR	NA	NA	NA	NA
AJQ68975.1\|2969027_2970146_-	macrolide transporter subunit MacA	A0A140XAI1	Dickeya_phage	8.1e-09	39.8

DBSCAN-SWA_8

4315065 : 4359839

Burkholderia_phage(36.36%)

tRNA,plate,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AJQ67686.1\|4315065_4316064_-\|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	NA	NA	NA	NA
AJQ67685.1\|4316151_4317462_-	conjugal transfer protein	NA	NA	NA	NA
AJQ67684.1\|4317708_4318224_+	transcriptional regulator Zur	NA	NA	NA	NA
AJQ67683.2\|4318323_4318533_-	CsbD family protein	NA	NA	NA	NA
AJQ67682.2\|4318554_4318668_-	hypothetical protein	NA	NA	NA	NA
AJQ67681.1\|4318664_4319990_-	MATE family efflux transporter	NA	NA	NA	NA
AJQ67680.1\|4320168_4320777_-	LexA repressor	Q9G0C2	Lactococcus_phage	1.0e-13	38.0
AJQ67679.1\|4320885_4321254_-	diacylglycerol kinase	NA	NA	NA	NA
AJQ67678.1\|4321424_4323845_+	glycerol-3-phosphate 1-O-acyltransferase	NA	NA	NA	NA
AJQ67677.1\|4323943_4324816_-	4-hydroxybenzoate octaprenyltransferase	NA	NA	NA	NA
AJQ67676.1\|4324829_4325327_-	chorismate lyase	NA	NA	NA	NA
AJQ67675.1\|4325507_4326425_-	maltose operon protein MalM	NA	NA	NA	NA
AJQ67674.1\|4326588_4327947_-	maltoporin	NA	NA	NA	NA
AJQ67673.1\|4328035_4329145_-	maltose/maltodextrin import ATP-binding protein MalK	Q6GZ03	Mycoplasma_phage	6.2e-17	47.2
AJQ67672.2\|4329505_4330696_+	maltose/maltodextrin ABC transporter substrate-binding protein MalE	NA	NA	NA	NA
AJQ67671.1\|4330827_4332372_+	maltose ABC transporter permease MalF	NA	NA	NA	NA
AJQ67670.2\|4332386_4333277_+	maltose ABC transporter permease	NA	NA	NA	NA
AJQ67669.1\|4333442_4333853_-	phosphate-starvation-inducible protein PsiE	NA	NA	NA	NA
AJQ67668.1\|4333995_4336092_-	YjbH domain-containing protein	NA	NA	NA	NA
AJQ67667.1\|4336091_4336829_-	hypothetical protein	NA	NA	NA	NA
AJQ67666.1\|4336825_4337464_-	YjbF family lipoprotein	NA	NA	NA	NA
AJQ67665.2\|4337527_4337770_-	outer membrane protein	NA	NA	NA	NA
AJQ67664.1\|4338213_4339863_-	glucose-6-phosphate isomerase	NA	NA	NA	NA
AJQ67663.1\|4340207_4341557_+	lysine-sensitive aspartokinase 3	NA	NA	NA	NA
AJQ67662.1\|4341687_4342014_-	DNA-binding protein	Q6QIE8	Burkholderia_phage	3.5e-21	51.5
AJQ67659.1\|4342611_4342899_+	hypothetical protein	Q6QIC8	Burkholderia_phage	3.0e-16	48.1
AJQ67658.2\|4342901_4343507_+	lytic transglycosylase domain-containing protein	Q5ZQZ1	Pseudomonas_phage	9.3e-60	59.4
AJQ67657.1\|4343519_4343834_+	hypothetical protein	Q6QIC4	Burkholderia_phage	6.4e-20	49.1
AJQ67656.1\|4343993_4344419_+	hypothetical protein	NA	NA	NA	NA
AJQ67655.1\|4344444_4344642_+	hypothetical protein	Q6QIB1	Burkholderia_phage	8.6e-07	52.9
AJQ67654.1\|4344631_4346059_+\|tail	phage tail sheath family protein	A4JWK5	Burkholderia_virus	1.4e-194	70.9
AJQ67653.1\|4346058_4346583_+\|tail	phage major tail tube protein	Q6QIA9	Burkholderia_phage	2.8e-68	69.5
AJQ67652.1\|4346634_4346952_+\|tail	phage tail assembly protein	NA	NA	NA	NA
AJQ67651.1\|4346911_4347040_+\|tail	GpE family phage tail protein	NA	NA	NA	NA
AJQ67650.1\|4347136_4349488_+\|tail	phage tail tape measure protein	A4JWL0	Burkholderia_virus	3.4e-65	30.3
AJQ67649.1\|4349487_4350441_+	chemotaxis protein	A4JWL1	Burkholderia_virus	2.3e-36	50.8
AJQ67648.1\|4350440_4350650_+	hypothetical protein	A4JWL2	Burkholderia_virus	9.8e-17	60.3
AJQ67647.1\|4350637_4351681_+	phage protein D	A4JWL3	Burkholderia_virus	3.8e-77	45.9
AJQ67646.1\|4351690_4352413_+\|plate	phage baseplate assembly protein V	A0A067ZIM2	Vibrio_phage	3.9e-12	42.0
AJQ67644.2\|4352740_4353103_+	GtrA family protein	I1TED9	Salmonella_phage	1.2e-43	70.8
AJQ67643.1\|4353099_4354029_+	glycosyltransferase	S5FKN0	Shigella_phage	7.9e-151	84.1
AJQ67642.1\|4354028_4355576_+	hypothetical protein	B9UDL6	Salmonella_phage	1.5e-48	29.9
AJQ67640.2\|4355739_4356099_+\|plate	baseplate protein	Q6QIA0	Burkholderia_phage	2.8e-35	64.2
AJQ67639.1\|4356089_4357205_+\|plate	baseplate protein	Q6QI99	Burkholderia_phage	1.8e-101	52.2
AJQ67638.1\|4357197_4357830_+\|tail	phage tail protein I	Q6QI98	Burkholderia_phage	6.6e-24	56.4
AJQ67637.1\|4357832_4359314_+\|tail	phage tail protein	A0A0M3ULF6	Salmonella_phage	1.3e-51	51.7
AJQ67636.1\|4359323_4359839_+\|tail	tail fiber assembly protein	A0A0U2QV64	Escherichia_phage	3.4e-34	41.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP007216

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection