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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP026961 Staphylococcus aureus strain FDAARGOS_10 chromosome, complete genome 0 crisprs csa3,WYL,cas3,DEDDh,DinG 0 0 205 0

Results visualization

1. CP026961
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 27482 53 Staphylococcus_phage(86.79%) terminase,capsid,integrase,tail,head,portal attL 11256:11269|attR 30109:30122
DBSCAN-SWA_2 33514 : 34144 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_3 39195 : 39609 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_4 43060 : 48089 5 Staphylococcus_phage(33.33%) NA NA
DBSCAN-SWA_5 55264 : 149289 122 Staphylococcus_phage(88.24%) terminase,holin,capsid,integrase,tail,protease,head,portal attL 126669:126685|attR 152863:152879
DBSCAN-SWA_6 156468 : 170314 13 uncultured_Caudovirales_phage(16.67%) tRNA NA
DBSCAN-SWA_7 174074 : 178798 4 Yellowstone_lake_phycodnavirus(50.0%) NA NA
DBSCAN-SWA_8 192481 : 195854 5 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_9 201004 : 203032 1 Paramecium_bursaria_Chlorella_virus(100.0%) NA NA
DBSCAN-SWA_10 208719 : 210240 1 Diachasmimorpha_longicaudata_entomopoxvirus(100.0%) NA NA
DBSCAN-SWA_11 217440 : 218088 1 Moumouvirus(100.0%) NA NA
DBSCAN-SWA_12 224258 : 224654 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_13 235058 : 242808 9 Catovirus(25.0%) NA NA
DBSCAN-SWA_14 250611 : 252222 1 Only_Syngen_Nebraska_virus(100.0%) NA NA
DBSCAN-SWA_15 260160 : 263992 5 Geobacillus_virus(50.0%) NA NA
DBSCAN-SWA_16 276599 : 279419 2 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_17 285675 : 293112 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_18 296702 : 297611 1 Klosneuvirus(100.0%) NA NA
DBSCAN-SWA_19 314958 : 315927 1 uncultured_Caudovirales_phage(100.0%) NA NA
DBSCAN-SWA_20 328084 : 329647 1 Vibrio_phage(100.0%) NA NA
DBSCAN-SWA_21 333607 : 335020 1 Pandoravirus(100.0%) NA NA
DBSCAN-SWA_22 341341 : 344436 5 Orpheovirus(50.0%) NA NA
DBSCAN-SWA_23 347812 : 357042 9 Clostridium_phage(33.33%) protease NA
DBSCAN-SWA_24 362471 : 364138 2 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_25 387601 : 390769 1 Leptospira_phage(100.0%) NA NA
DBSCAN-SWA_26 402855 : 403461 1 Pithovirus(100.0%) NA NA
DBSCAN-SWA_27 422438 : 423242 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_28 427158 : 431139 5 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_29 444703 : 445339 1 Paramecium_bursaria_Chlorella_virus(100.0%) NA NA
DBSCAN-SWA_30 453216 : 454098 1 Diadromus_pulchellus_ascovirus(100.0%) NA NA
DBSCAN-SWA_31 459971 : 460391 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_32 467763 : 468663 1 Brazilian_cedratvirus(100.0%) NA NA
DBSCAN-SWA_33 480784 : 481993 1 Salmonella_phage(100.0%) NA NA
DBSCAN-SWA_34 486572 : 490469 4 Planktothrix_phage(33.33%) NA NA
DBSCAN-SWA_35 500328 : 501363 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_36 522781 : 524341 1 Escherichia_phage(100.0%) NA NA
DBSCAN-SWA_37 540992 : 541724 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_38 549668 : 555440 6 Staphylococcus_phage(75.0%) NA NA
DBSCAN-SWA_39 558900 : 565087 6 Bacillus_phage(66.67%) NA NA
DBSCAN-SWA_40 582814 : 584673 2 Bacillus_virus(50.0%) NA NA
DBSCAN-SWA_41 588366 : 592795 4 Pandoravirus(50.0%) NA NA
DBSCAN-SWA_42 599928 : 601486 2 Bacillus_virus(50.0%) NA NA
DBSCAN-SWA_43 614847 : 615543 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_44 622367 : 627548 3 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_45 636888 : 637755 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_46 658136 : 658832 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_47 668112 : 669105 1 Acanthocystis_turfacea_Chlorella_virus(100.0%) NA NA
DBSCAN-SWA_48 678691 : 685075 5 Powai_lake_megavirus(33.33%) NA NA
DBSCAN-SWA_49 692958 : 695994 2 Streptococcus_phage(50.0%) protease NA
DBSCAN-SWA_50 705235 : 709218 3 uncultured_virus(50.0%) NA NA
DBSCAN-SWA_51 717651 : 721440 3 Salmonella_virus(50.0%) NA NA
DBSCAN-SWA_52 749575 : 759689 9 Klosneuvirus(50.0%) holin NA
DBSCAN-SWA_53 765534 : 767918 2 Enterococcus_phage(100.0%) NA NA
DBSCAN-SWA_54 772970 : 773468 1 Canarypox_virus(100.0%) NA NA
DBSCAN-SWA_55 776888 : 778639 2 Planktothrix_phage(50.0%) NA NA
DBSCAN-SWA_56 804323 : 806183 1 Enterococcus_phage(100.0%) NA NA
DBSCAN-SWA_57 832284 : 832977 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_58 845428 : 846442 1 Faustovirus(100.0%) NA NA
DBSCAN-SWA_59 852071 : 853784 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_60 868041 : 868800 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_61 873100 : 876366 5 Lactococcus_phage(33.33%) NA NA
DBSCAN-SWA_62 886448 : 895487 6 Bacillus_virus(50.0%) tRNA NA
DBSCAN-SWA_63 902180 : 912192 8 Bacillus_phage(40.0%) NA NA
DBSCAN-SWA_64 919784 : 920852 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_65 957934 : 962144 4 uncultured_Caudovirales_phage(50.0%) NA NA
DBSCAN-SWA_66 970410 : 971613 1 Tupanvirus(100.0%) NA NA
DBSCAN-SWA_67 974983 : 975964 1 Catovirus(100.0%) NA NA
DBSCAN-SWA_68 980901 : 981501 1 Bacillus_thuringiensis_phage(100.0%) NA NA
DBSCAN-SWA_69 989534 : 990308 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_70 1001590 : 1008155 6 Catovirus(50.0%) NA NA
DBSCAN-SWA_71 1014990 : 1017475 2 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_72 1020815 : 1023813 4 Indivirus(50.0%) NA NA
DBSCAN-SWA_73 1027351 : 1037635 3 Catovirus(50.0%) NA NA
DBSCAN-SWA_74 1042471 : 1043656 1 Klosneuvirus(100.0%) NA NA
DBSCAN-SWA_75 1061816 : 1063409 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_76 1071944 : 1074003 2 Pontimonas_phage(50.0%) NA NA
DBSCAN-SWA_77 1084213 : 1089572 3 Enterobacteria_phage(50.0%) NA NA
DBSCAN-SWA_78 1100644 : 1102150 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_79 1111025 : 1112555 1 Vibrio_phage(100.0%) NA NA
DBSCAN-SWA_80 1119770 : 1120814 1 Synechococcus_phage(100.0%) NA NA
DBSCAN-SWA_81 1130141 : 1134681 3 Catovirus(50.0%) NA NA
DBSCAN-SWA_82 1138441 : 1139878 1 Pandoravirus(100.0%) NA NA
DBSCAN-SWA_83 1149167 : 1150829 2 Arthrobacter_phage(50.0%) NA NA
DBSCAN-SWA_84 1162792 : 1167232 1 Mycobacterium_phage(100.0%) NA NA
DBSCAN-SWA_85 1187435 : 1188113 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_86 1206344 : 1209079 3 Tupanvirus(50.0%) NA NA
DBSCAN-SWA_87 1230291 : 1231134 1 Anomala_cuprea_entomopoxvirus(100.0%) NA NA
DBSCAN-SWA_88 1241052 : 1249470 14 Staphylococcus_phage(66.67%) integrase,protease attL 1230160:1230174|attR 1252512:1252526
DBSCAN-SWA_89 1255664 : 1257188 1 Enterococcus_phage(100.0%) NA NA
DBSCAN-SWA_90 1266148 : 1271598 5 Klosneuvirus(25.0%) NA NA
DBSCAN-SWA_91 1285300 : 1288061 2 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_92 1308311 : 1314549 6 Lactococcus_phage(33.33%) NA NA
DBSCAN-SWA_93 1331195 : 1332893 1 Streptococcus_virus(100.0%) NA NA
DBSCAN-SWA_94 1342563 : 1343181 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_95 1347087 : 1350185 2 Streptococcus_phage(50.0%) tRNA NA
DBSCAN-SWA_96 1356069 : 1358534 2 Tupanvirus(50.0%) NA NA
DBSCAN-SWA_97 1367790 : 1378062 10 Klosneuvirus(16.67%) tRNA NA
DBSCAN-SWA_98 1396993 : 1399450 1 Escherichia_phage(100.0%) protease NA
DBSCAN-SWA_99 1405461 : 1410244 8 Catovirus(50.0%) tRNA NA
DBSCAN-SWA_100 1413927 : 1424881 6 uncultured_Mediterranean_phage(33.33%) NA NA
DBSCAN-SWA_101 1427909 : 1429097 1 Emiliania_huxleyi_virus(100.0%) NA NA
DBSCAN-SWA_102 1435675 : 1436338 1 Enterococcus_phage(100.0%) NA NA
DBSCAN-SWA_103 1455895 : 1459216 3 Burkholderia_virus(50.0%) NA NA
DBSCAN-SWA_104 1462857 : 1463514 1 Elephant_endotheliotropic_herpesvirus(100.0%) NA NA
DBSCAN-SWA_105 1474819 : 1476142 1 Erysipelothrix_phage(100.0%) NA NA
DBSCAN-SWA_106 1489691 : 1493045 3 Cafeteria_roenbergensis_virus(50.0%) NA NA
DBSCAN-SWA_107 1506116 : 1506677 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_108 1518103 : 1518847 1 Indivirus(100.0%) NA NA
DBSCAN-SWA_109 1525781 : 1529740 3 Streptomyces_phage(33.33%) NA NA
DBSCAN-SWA_110 1532967 : 1533765 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_111 1540287 : 1541331 1 Acanthamoeba_polyphaga_mimivirus(100.0%) NA NA
DBSCAN-SWA_112 1545705 : 1546467 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_113 1551298 : 1552096 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_114 1557358 : 1557832 1 Pandoravirus(100.0%) NA NA
DBSCAN-SWA_115 1564691 : 1570971 6 Enterococcus_phage(33.33%) NA NA
DBSCAN-SWA_116 1575948 : 1577322 1 Powai_lake_megavirus(100.0%) NA NA
DBSCAN-SWA_117 1588934 : 1598780 12 Staphylococcus_phage(12.5%) NA NA
DBSCAN-SWA_118 1601919 : 1625483 23 uncultured_Caudovirales_phage(35.71%) NA NA
DBSCAN-SWA_119 1634765 : 1639993 5 Streptococcus_phage(66.67%) NA NA
DBSCAN-SWA_120 1646071 : 1646911 1 uncultured_Caudovirales_phage(100.0%) NA NA
DBSCAN-SWA_121 1650229 : 1653076 1 uncultured_Mediterranean_phage(100.0%) NA NA
DBSCAN-SWA_122 1657521 : 1663568 6 Streptococcus_phage(40.0%) protease NA
DBSCAN-SWA_123 1672624 : 1681502 10 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_124 1690601 : 1691845 2 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_125 1695249 : 1700426 8 Streptococcus_phage(50.0%) NA NA
DBSCAN-SWA_126 1703687 : 1704713 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_127 1708199 : 1711722 3 Indivirus(50.0%) NA NA
DBSCAN-SWA_128 1724842 : 1727511 2 Tupanvirus(50.0%) NA NA
DBSCAN-SWA_129 1731554 : 1735182 3 Lake_Baikal_phage(50.0%) NA NA
DBSCAN-SWA_130 1745102 : 1752261 7 Aureococcus_anophage(33.33%) NA NA
DBSCAN-SWA_131 1762415 : 1766069 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_132 1771186 : 1777996 4 Pseudomonas_phage(33.33%) NA NA
DBSCAN-SWA_133 1786591 : 1788605 2 Planktothrix_phage(50.0%) NA NA
DBSCAN-SWA_134 1792256 : 1850993 60 Bacillus_virus(22.22%) protease,holin,tRNA,bacteriocin NA
DBSCAN-SWA_135 1854659 : 1858430 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_136 1868827 : 1883587 14 Synechococcus_phage(22.22%) NA NA
DBSCAN-SWA_137 1886766 : 1891146 5 Streptococcus_phage(50.0%) NA NA
DBSCAN-SWA_138 1897260 : 1906093 9 Synechococcus_phage(25.0%) NA NA
DBSCAN-SWA_139 1914228 : 1916076 1 Erysipelothrix_phage(100.0%) NA NA
DBSCAN-SWA_140 1927593 : 2008024 101 Staphylococcus_phage(63.38%) terminase,plate,transposase,capsid,holin,tail,tRNA,head,portal NA
DBSCAN-SWA_141 2017107 : 2017452 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_142 2026924 : 2027665 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_143 2036546 : 2102128 70 Staphylococcus_phage(92.86%) transposase,bacteriocin,protease NA
DBSCAN-SWA_144 2105288 : 2119419 7 Staphylococcus_phage(100.0%) tRNA NA
DBSCAN-SWA_145 2131129 : 2136457 3 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_146 2145362 : 2147069 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_147 2153686 : 2156317 2 Cronobacter_phage(50.0%) tRNA NA
DBSCAN-SWA_148 2160086 : 2164221 4 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_149 2181761 : 2184959 1 Streptomyces_phage(100.0%) NA NA
DBSCAN-SWA_150 2189892 : 2193937 2 Staphylococcus_phage(50.0%) transposase NA
DBSCAN-SWA_151 2198506 : 2206670 5 Feldmannia_irregularis_virus(25.0%) NA NA
DBSCAN-SWA_152 2210584 : 2221737 13 Brevibacillus_phage(20.0%) protease,tRNA NA
DBSCAN-SWA_153 2231304 : 2233935 1 Catovirus(100.0%) tRNA NA
DBSCAN-SWA_154 2243802 : 2279182 31 uncultured_Mediterranean_phage(18.75%) protease,tRNA NA
DBSCAN-SWA_155 2285854 : 2288241 2 Lactococcus_phage(50.0%) NA NA
DBSCAN-SWA_156 2295510 : 2301674 5 Bacillus_phage(33.33%) NA NA
DBSCAN-SWA_157 2305165 : 2308273 2 Micromonas_pusilla_virus(50.0%) NA NA
DBSCAN-SWA_158 2314743 : 2315691 1 Rhizobium_phage(100.0%) NA NA
DBSCAN-SWA_159 2318744 : 2332472 13 Klosneuvirus(25.0%) tRNA NA
DBSCAN-SWA_160 2338645 : 2339269 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_161 2344813 : 2347625 2 Prochlorococcus_phage(100.0%) NA NA
DBSCAN-SWA_162 2355125 : 2361696 6 Indivirus(66.67%) NA NA
DBSCAN-SWA_163 2368525 : 2369932 1 Synechococcus_phage(100.0%) NA NA
DBSCAN-SWA_164 2374578 : 2376063 1 Cyanophage(100.0%) NA NA
DBSCAN-SWA_165 2379592 : 2437238 79 Staphylococcus_phage(61.97%) terminase,capsid,integrase,holin,tail,protease,head,portal attL 2391003:2391027|attR 2437035:2437059
DBSCAN-SWA_166 2441629 : 2444308 3 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_167 2453732 : 2459199 8 Bacillus_phage(25.0%) NA NA
DBSCAN-SWA_168 2462861 : 2463437 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_169 2466807 : 2474313 5 unidentified_phage(25.0%) tRNA NA
DBSCAN-SWA_170 2478053 : 2478680 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_171 2488005 : 2488884 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_172 2524518 : 2533908 13 Staphylococcus_phage(60.0%) protease NA
DBSCAN-SWA_173 2537316 : 2539328 2 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_174 2545493 : 2546285 1 Halovirus(100.0%) NA NA
DBSCAN-SWA_175 2550764 : 2555795 8 Lactobacillus_phage(33.33%) NA NA
DBSCAN-SWA_176 2563640 : 2565242 1 Klosneuvirus(100.0%) NA NA
DBSCAN-SWA_177 2570328 : 2573782 3 Indivirus(50.0%) NA NA
DBSCAN-SWA_178 2577196 : 2577898 1 Tupanvirus(100.0%) NA NA
DBSCAN-SWA_179 2585414 : 2587769 3 Acinetobacter_phage(100.0%) NA NA
DBSCAN-SWA_180 2592087 : 2593350 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_181 2603009 : 2607403 2 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_182 2613339 : 2614986 1 Vibrio_phage(100.0%) NA NA
DBSCAN-SWA_183 2618655 : 2619777 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_184 2623926 : 2629582 7 Phage_Wrath(25.0%) NA NA
DBSCAN-SWA_185 2639718 : 2643994 6 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_186 2648542 : 2654967 14 Staphylococcus_phage(66.67%) head NA
DBSCAN-SWA_187 2660036 : 2660513 1 Fowlpox_virus(100.0%) NA NA
DBSCAN-SWA_188 2666455 : 2672927 4 Acanthocystis_turfacea_Chlorella_virus(33.33%) NA NA
DBSCAN-SWA_189 2682341 : 2683385 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_190 2687586 : 2693130 4 Bacillus_virus(33.33%) NA NA
DBSCAN-SWA_191 2698270 : 2710083 10 Klosneuvirus(33.33%) tRNA NA
DBSCAN-SWA_192 2714381 : 2715152 1 Flavobacterium_phage(100.0%) NA NA
DBSCAN-SWA_193 2719926 : 2733597 11 Erwinia_phage(16.67%) tRNA NA
DBSCAN-SWA_194 2746981 : 2749039 4 Acanthamoeba_polyphaga_mimivirus(33.33%) NA NA
DBSCAN-SWA_195 2759409 : 2761404 1 Moumouvirus(100.0%) NA NA
DBSCAN-SWA_196 2764551 : 2765487 1 Prochlorococcus_phage(100.0%) tRNA NA
DBSCAN-SWA_197 2770499 : 2772756 3 Methanothermobacter_phage(50.0%) NA NA
DBSCAN-SWA_198 2776070 : 2776682 1 Pandoravirus(100.0%) NA NA
DBSCAN-SWA_199 2780649 : 2785260 4 Halovirus(33.33%) NA NA
DBSCAN-SWA_200 2789723 : 2792477 1 Orpheovirus(100.0%) tRNA NA
DBSCAN-SWA_201 2812075 : 2812264 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_202 2821234 : 2824316 5 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_203 2837365 : 2841923 3 Staphylococcus_phage(33.33%) NA NA
DBSCAN-SWA_204 2846665 : 2847724 1 Orpheovirus(100.0%) tRNA NA
DBSCAN-SWA_205 2857706 : 2872108 13 Staphylococcus_phage(53.85%) plate,tail,holin NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage