CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Prophage number
CP026956	Staphylococcus aureus strain FDAARGOS_48 plasmid unnamed3	0 crisprs	NA	0
CP026953	Staphylococcus aureus strain FDAARGOS_48 chromosome, complete genome	0 crisprs	csa3,DEDDh,RT,WYL,cas3,DinG	8
CP026954	Staphylococcus aureus strain FDAARGOS_48 plasmid unnamed1	0 crisprs	NA	0
CP026955	Staphylococcus aureus strain FDAARGOS_48 plasmid unnamed2	0 crisprs	csa3	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

159117 : 168160

uncultured_Mediterranean_phage(50.0%)

tRNA

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVG48672.1\|159117_159636_-	adenine phosphoribosyltransferase	A0A1V0SKE5	Klosneuvirus	5.6e-29	46.5
AVG48673.1\|159657_161931_-	single-stranded-DNA-specific exonuclease RecJ	A7KV88	Bacillus_phage	8.1e-64	29.3
AVG48674.1\|162133_164413_-	protein translocase subunit SecDF	A0A1B1IVP7	uncultured_Mediterranean_phage	1.8e-31	35.8
AVG48675.1\|164687_164948_-	preprotein translocase subunit YajC	A0A1B1IVR5	uncultured_Mediterranean_phage	8.2e-05	35.3
AVG48676.1\|164966_166106_-\|tRNA	tRNA guanosine(34) transglycosylase Tgt	A0A1B1IVQ4	uncultured_Mediterranean_phage	5.4e-85	44.7
AVG48677.1\|166128_167154_-\|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	NA	NA	NA	NA
AVG48678.1\|167155_168160_-	Holliday junction branch migration DNA helicase RuvB	B3GAM6	uncultured_virus	1.7e-05	29.1

DBSCAN-SWA_2

282188 : 353407

Staphylococcus_phage(95.74%)

protease,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVG48783.1\|282188_282833_-\|tRNA	tRNA (guanosine(46)-N7)-methyltransferase TrmB	NA	NA	NA	NA
AVG48784.1\|282847_283639_-	phosphotransferase	NA	NA	NA	NA
AVG48785.1\|284188_285037_-	D-amino-acid transaminase	NA	NA	NA	NA
AVG48786.1\|285040_286450_-	dipeptidase PepV	NA	NA	NA	NA
AVG48787.1\|287007_287430_-	YtxH domain-containing protein	NA	NA	NA	NA
AVG48788.1\|287446_288142_-	rRNA pseudouridine synthase	NA	NA	NA	NA
AVG48789.1\|288138_289800_-	polysaccharide biosynthesis protein	NA	NA	NA	NA
AVG48790.1\|290206_291475_+	NAD(P)/FAD-dependent oxidoreductase	A0A2H4PQX1	Staphylococcus_phage	9.1e-57	99.1
AVG48791.1\|291591_298152_-	YSIRK signal domain/LPXTG anchor domain surface protein	A0A2H4PQU6	Staphylococcus_phage	6.1e-306	98.3
AVG48792.1\|298477_298789_-	rhodanese-like domain-containing protein	A0A2H4PQR9	Staphylococcus_phage	4.8e-52	99.0
AVG48793.1\|298810_301228_-\|tRNA	leucine--tRNA ligase	A0A2H4PQS0	Staphylococcus_phage	0.0e+00	99.5
AVG48794.1\|301515_302697_-	MFS transporter	A0A2H4PQR6	Staphylococcus_phage	7.3e-218	99.7
AVG48795.1\|302806_303760_+	TIGR01212 family radical SAM protein	A0A2H4PQV5	Staphylococcus_phage	2.2e-79	100.0
AVG48796.1\|303756_304320_+	methyltransferase domain-containing protein	A0A2H4PQV0	Staphylococcus_phage	8.3e-103	99.5
AVG48797.1\|304442_304844_-	MarR family transcriptional regulator	NA	NA	NA	NA
AVG48798.1\|305415_306243_-	alpha/beta hydrolase	NA	NA	NA	NA
AVG48799.1\|306245_306365_-	hypothetical protein	NA	NA	NA	NA
AVG48800.1\|306476_307478_+	proline dehydrogenase	A0A2H4PQT6	Staphylococcus_phage	2.6e-184	99.4
AVG48801.1\|307599_308064_-	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	4.5e-70	100.0
AVG48802.1\|308076_309258_-	riboflavin biosynthesis protein RibBA	A0A2H4PQS2	Staphylococcus_phage	5.6e-226	99.5
AVG48803.1\|309268_309901_-	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	5.5e-111	98.6
AVG51215.1\|309907_310939_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A2H4PQS8	Staphylococcus_phage	4.0e-196	98.8
AVG48804.1\|311431_312934_-	pyridine nucleotide-disulfide oxidoreductase	A0A2H4PQX2	Staphylococcus_phage	1.9e-29	98.6
AVG48805.1\|313456_313771_+	ArsR family transcriptional regulator	A0A2H4PQT4	Staphylococcus_phage	9.8e-53	98.1
AVG48806.1\|313770_315063_+	arsenical efflux pump membrane protein ArsB	A0A2H4PQU3	Staphylococcus_phage	5.0e-228	99.5
AVG48807.1\|315149_316004_-	autolysin	Q4ZCC7	Staphylococcus_virus	9.8e-39	38.6
AVG48808.1\|316279_316504_-	hypothetical protein	NA	NA	NA	NA
AVG48809.1\|316702_317173_+	RNA polymerase sigma factor SigS	A0A2H4PQT5	Staphylococcus_phage	8.8e-82	98.1
AVG48810.1\|317285_317729_+	competence protein ComK	NA	NA	NA	NA
AVG48811.1\|317715_318159_-	hypothetical protein	A0A2H4PQT8	Staphylococcus_phage	2.4e-57	98.6
AVG48812.1\|318454_319090_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
AVG48813.1\|319529_320243_-	transaldolase	M1PR54	Cyanophage	5.5e-19	35.3
AVG48814.1\|320502_320805_+	hypothetical protein	NA	NA	NA	NA
AVG48815.1\|321060_321426_+	fluoride efflux transporter CrcB	A0A2H4PQR0	Staphylococcus_phage	3.6e-59	100.0
AVG48816.1\|321422_321776_+	camphor resistance protein CrcB	A0A2H4PQQ7	Staphylococcus_phage	3.8e-21	94.0
AVG48817.1\|323378_324212_-	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	7.8e-158	99.3
AVG48818.1\|324423_325332_-	NERD domain-containing protein	A0A2H4PQQ8	Staphylococcus_phage	3.4e-138	100.0
AVG48819.1\|325453_326650_-	S-adenosylmethionine synthase	A0A2H4PQS6	Staphylococcus_phage	4.3e-218	99.5
AVG48820.1\|327021_328614_+	phosphoenolpyruvate carboxykinase (ATP)	A0A2H4PQN1	Staphylococcus_phage	0.0e+00	100.0
AVG51216.1\|328991_329738_-	S9 family peptidase	A0A2H4PQM6	Staphylococcus_phage	1.4e-142	98.8
AVG48821.1\|329742_330216_-	nucleoside triphosphatase YtkD	A0A2H4PQM4	Staphylococcus_phage	7.2e-84	98.7
AVG48822.1\|330281_330539_+	membrane protein insertion efficiency factor YidD	A0A2H4PQM5	Staphylococcus_phage	7.2e-46	100.0
AVG48823.1\|330535_331537_-	o-succinylbenzoate synthase	A0A2H4PQM0	Staphylococcus_phage	2.6e-184	97.0
AVG48824.1\|331541_333020_-	2-succinylbenzoate-CoA ligase	A0A2H4PQM9	Staphylococcus_phage	2.8e-283	97.6
AVG51217.1\|333178_333634_-	DUF4909 domain-containing protein	A0A2H4PQN7	Staphylococcus_phage	3.6e-80	99.3
AVG48825.1\|333936_334587_+	calcium-binding protein	A0A2H4PQM8	Staphylococcus_phage	2.9e-51	94.0
AVG48826.1\|334667_335663_+	DUF4352 domain-containing protein	A0A2H4PQN2	Staphylococcus_phage	2.6e-67	97.9
AVG48827.1\|335737_336364_+	hypothetical protein	A0A2H4PQM7	Staphylococcus_phage	2.0e-73	79.3
AVG48828.1\|336404_336746_+	DUF3969 domain-containing protein	A0A2H4PQN6	Staphylococcus_phage	1.1e-54	94.7
AVG48829.1\|336846_337419_+	hypothetical protein	A0A2H4PQN4	Staphylococcus_phage	2.3e-23	93.1
AVG48830.1\|338991_339093_+	hypothetical protein	NA	NA	NA	NA
AVG48831.1\|340168_341398_-	restriction endonuclease subunit S	A0A2H4PQP5	Staphylococcus_phage	4.0e-134	64.7
AVG48832.1\|341390_343130_-	type I restriction-modification system subunit M	A0A2H4PQP4	Staphylococcus_phage	2.4e-289	100.0
AVG48833.1\|343110_343245_-	hypothetical protein	NA	NA	NA	NA
AVG48834.1\|343307_344027_-\|protease	serine protease SplF	A0A2H4PQP1	Staphylococcus_phage	1.9e-131	99.6
AVG48835.1\|344128_344236_+	hypothetical protein	NA	NA	NA	NA
AVG48836.1\|344184_344904_-\|protease	serine protease SplD	A0A2H4PQP9	Staphylococcus_phage	4.6e-130	99.6
AVG48837.1\|345024_345744_-\|protease	serine protease	A0A2H4PQP7	Staphylococcus_phage	6.6e-129	98.3
AVG48838.1\|345801_346524_-\|protease	serine protease SplB	A0A2H4PQN0	Staphylococcus_phage	3.5e-130	98.3
AVG48839.1\|346648_347356_-\|protease	serine protease SplA	A0A2H4PQN3	Staphylococcus_phage	7.9e-127	97.0
AVG48840.1\|347791_348010_-	hypothetical protein	NA	NA	NA	NA
AVG48841.1\|348319_348901_+	DUF4888 domain-containing protein	A0A2H4PQH6	Staphylococcus_phage	2.8e-53	64.2
AVG48842.1\|349373_349592_-	hypothetical protein	A0A2H4PQH0	Staphylococcus_phage	2.0e-25	80.6
AVG48843.1\|349847_350321_+	hypothetical protein	NA	NA	NA	NA
AVG48844.1\|350325_351117_+	DUF1828 domain-containing protein	NA	NA	NA	NA
AVG48845.1\|351486_352470_-	bi-component leukocidin LukED subunit D	A0A2H4PQH7	Staphylococcus_phage	1.8e-185	99.4
AVG48846.1\|352471_353407_-	beta-channel forming cytolysin	A0A2H4PQI5	Staphylococcus_phage	1.4e-174	100.0

DBSCAN-SWA_3

447228 : 544105

121

Staphylococcus_phage(83.13%)

portal,tail,protease,transposase,capsid,integrase,tRNA,terminase,holin,head

attL 443665:443689|attR 553241:553265

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
443665:443689	attL	NA	NA	NA	NA
AVG48932.1\|447228_447531_-\|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit C	NA	NA	NA	NA
AVG48933.1\|447897_449436_+	sodium:proline symporter	NA	NA	NA	NA
AVG48934.1\|449524_450724_-	CamS family sex pheromone protein	NA	NA	NA	NA
AVG48935.1\|450736_452740_-	DNA ligase (NAD(+)) LigA	A0A0K2QQN8	Ralstonia_phage	1.2e-114	36.2
AVG48936.1\|452743_454936_-	DNA helicase PcrA	A7KV33	Bacillus_phage	1.0e-135	42.2
AVG48937.1\|454932_455625_-	geranylgeranylglyceryl/heptaprenylglyceryl phosphate synthase	NA	NA	NA	NA
AVG48938.1\|455796_456099_-	hypothetical protein	NA	NA	NA	NA
AVG48939.1\|456207_457503_-	adenylosuccinate lyase	A0A1B3B081	Gordonia_phage	1.6e-16	32.9
AVG48940.1\|458362_459529_+\|protease	cysteine protease staphopain A	NA	NA	NA	NA
AVG48941.1\|459559_459886_+	staphostatin A	NA	NA	NA	NA
AVG48942.1\|460177_460351_-	NETI motif-containing protein	NA	NA	NA	NA
AVG48943.1\|460331_460934_-	DUF2179 domain-containing protein	NA	NA	NA	NA
AVG48944.1\|461204_462026_-	NAD(+) synthetase	G3MA24	Bacillus_virus	2.3e-69	52.7
AVG48945.1\|462018_463488_-	nicotinate phosphoribosyltransferase	G3MA18	Bacillus_virus	5.9e-108	45.1
AVG48946.1\|463671_464748_+	nitric oxide synthase oxygenase	NA	NA	NA	NA
AVG48947.1\|464767_465562_+	ACT domain-containing protein	NA	NA	NA	NA
AVG48948.1\|465633_465741_+	hypothetical protein	NA	NA	NA	NA
AVG48949.1\|465751_467314_-	sodium-dependent dicarboxylate transporter SdcS	NA	NA	NA	NA
AVG48950.1\|467518_468616_-	pectate lyase	U5PWM6	Bacillus_phage	1.3e-46	34.3
AVG48951.1\|468984_469545_+	cysteine hydrolase	G3MA16	Bacillus_virus	2.0e-32	41.2
AVG48952.1\|469597_470527_+	manganese-dependent inorganic pyrophosphatase	NA	NA	NA	NA
AVG48953.1\|470719_470893_-	hypothetical protein	NA	NA	NA	NA
AVG48954.1\|470944_472324_+	aldehyde dehydrogenase	NA	NA	NA	NA
AVG48955.1\|472443_473472_-	hypothetical protein	NA	NA	NA	NA
AVG48956.1\|473930_474311_-	penicillinase repressor BlaI	NA	NA	NA	NA
AVG48957.1\|474300_476058_-	beta-lactam sensor/signal transducer BlaR1	NA	NA	NA	NA
AVG48958.1\|476164_477010_+	penicillin-hydrolyzing class A beta-lactamase BlaZ	A0A1B0VBP7	Salmonella_phage	4.4e-31	33.9
AVG48959.1\|477314_477734_+	YolD-like family protein	U3PG23	Staphylococcus_phage	3.1e-30	53.5
AVG48960.1\|479150_479516_-\|transposase	transposase	NA	NA	NA	NA
AVG51222.1\|479524_481552_-\|transposase	transposase	NA	NA	NA	NA
AVG48961.1\|481590_482742_-\|transposase	transposase	P97010	Streptococcus_pyogenes_phage	1.8e-11	31.6
AVG48962.1\|483764_483938_-	hypothetical protein	NA	NA	NA	NA
AVG48963.1\|484388_485429_+	linear amide C-N hydrolase	NA	NA	NA	NA
AVG48964.1\|485485_486328_-	hypothetical protein	NA	NA	NA	NA
AVG48965.1\|486324_486882_-	DUF1700 domain-containing protein	NA	NA	NA	NA
AVG48966.1\|486941_487466_-	hypothetical protein	NA	NA	NA	NA
AVG48967.1\|487586_488150_+	thioredoxin family protein	NA	NA	NA	NA
AVG48968.1\|488215_488956_-	phenol-soluble modulin export ABC transporter permease subunit PmtD	NA	NA	NA	NA
AVG48969.1\|488955_489828_-	phenol-soluble modulin export ABC transporter ATP-binding protein PmtC	A0A2H4PQG7	Staphylococcus_phage	1.0e-27	36.0
AVG48970.1\|489824_490505_-	phenol-soluble modulin export ABC transporter permease subunit PmtB	NA	NA	NA	NA
AVG48971.1\|490505_491402_-	phenol-soluble modulin export ABC transporter ATP-binding protein PmtA	A0A2H4PQG7	Staphylococcus_phage	5.0e-17	30.2
AVG48972.1\|491398_491779_-	GntR family transcriptional regulator	NA	NA	NA	NA
AVG48973.1\|492036_492213_-	hypothetical protein	NA	NA	NA	NA
AVG48974.1\|492455_492554_-	hypothetical protein	NA	NA	NA	NA
AVG48975.1\|492753_494040_+	aspartate aminotransferase	NA	NA	NA	NA
AVG48976.1\|494318_494609_-	MAP domain-containing protein	NA	NA	NA	NA
AVG48977.1\|494619_496053_-	MAP domain-containing protein	NA	NA	NA	NA
AVG48978.1\|496438_496639_+	hypothetical protein	A0A1P8L6A7	Staphylococcus_phage	3.4e-27	100.0
AVG48979.1\|497010_497190_+	hypothetical protein	A0A1W6JQ29	Staphylococcus_phage	2.2e-25	100.0
AVG48980.1\|497213_497522_+	hypothetical protein	M9NTD8	Staphylococcus_phage	9.3e-24	77.5
AVG48981.1\|497500_497761_+	hypothetical protein	M9NS66	Staphylococcus_phage	2.3e-23	100.0
AVG48982.1\|497813_498164_-	inhibitor	A7TWS0	Staphylococcus_phage	7.5e-54	100.0
AVG48983.1\|498846_499296_+	chemotaxis inhibitory protein	A0A075LZI2	Staphylococcus_phage	8.7e-79	100.0
AVG48984.1\|499590_499845_-	amidase	Q4ZCK0	Staphylococcus_virus	3.4e-11	90.7
AVG48985.1\|499771_499927_+	amidase	NA	NA	NA	NA
AVG48986.1\|500373_500865_-	kinase	A7TWR8	Staphylococcus_phage	8.0e-86	100.0
AVG48987.1\|501055_501811_-	CHAP domain-containing protein	D2JLG5	Staphylococcus_phage	3.4e-152	100.0
AVG48988.1\|501822_502077_-\|holin	phage holin	D2JLG4	Staphylococcus_phage	4.1e-41	100.0
AVG48989.1\|502128_502236_+	hypothetical protein	NA	NA	NA	NA
AVG48990.1\|502288_502465_-\|holin	putative holin-like toxin	D2JLG3	Staphylococcus_phage	6.5e-22	96.6
AVG48991.1\|502607_502982_-	hypothetical protein	G4KNR3	Staphylococcus_phage	3.3e-39	100.0
AVG48992.1\|503037_503325_-	hypothetical protein	C5I682	Staphylococcus_phage	9.9e-44	100.0
AVG48993.1\|503370_503523_-	hypothetical protein	A0A1W6JPL6	Staphylococcus_phage	7.6e-19	100.0
AVG48994.1\|503515_507298_-	hypothetical protein	A0A068A201	Staphylococcus_phage	0.0e+00	99.8
AVG48995.1\|507313_508798_-\|tail	phage tail protein	A0A2I6PDJ0	Staphylococcus_phage	1.2e-297	100.0
AVG48996.1\|508794_513324_-\|tail	phage tail tape measure protein	W5R8I2	Staphylococcus_phage	0.0e+00	95.0
AVG48997.1\|513568_513919_-	hypothetical protein	G4KNQ8	Staphylococcus_phage	7.8e-59	100.0
AVG48998.1\|513968_514193_-	hypothetical protein	A0A075LYE8	Staphylococcus_phage	3.0e-32	100.0
AVG48999.1\|514234_514879_-\|tail	phage tail protein	G4KNQ7	Staphylococcus_phage	6.5e-120	100.0
AVG49000.1\|514879_515287_-	hypothetical protein	G4KNQ6	Staphylococcus_phage	7.1e-72	100.0
AVG49001.1\|515283_515688_-	hypothetical protein	G4KNQ5	Staphylococcus_phage	4.3e-69	100.0
AVG49002.1\|515684_516047_-\|head,tail	phage head-tail adapter protein	G4KNQ4	Staphylococcus_phage	4.4e-65	100.0
AVG49003.1\|516030_516315_-\|head,tail	phage head-tail adapter protein	A0A2I6PDJ5	Staphylococcus_phage	2.3e-45	100.0
AVG49004.1\|516304_516589_-	hypothetical protein	A0A2I6PDJ3	Staphylococcus_phage	1.8e-45	100.0
AVG49005.1\|516608_517754_-\|capsid	phage major capsid protein	G4KNQ3	Staphylococcus_phage	9.6e-215	100.0
AVG49006.1\|517777_518515_-\|protease	Clp protease ClpP	G4KNQ2	Staphylococcus_phage	1.8e-129	100.0
AVG49007.1\|518498_519686_-\|portal	phage portal protein	G4KNQ1	Staphylococcus_phage	4.6e-220	100.0
AVG49008.1\|519701_521363_-\|terminase	terminase large subunit	A0A2I6PDJ8	Staphylococcus_phage	0.0e+00	98.6
AVG49009.1\|521359_521704_-	hypothetical protein	G4KNP9	Staphylococcus_phage	9.4e-57	100.0
AVG49010.1\|521833_522133_-	HNH endonuclease	A0EWY8	Staphylococcus_phage	4.6e-52	100.0
AVG49011.1\|522364_522781_-	transcriptional regulator	G4KNP7	Staphylococcus_phage	1.3e-76	100.0
AVG49012.1\|522808_523009_-	hypothetical protein	A0A2I6PDV9	Staphylococcus_phage	1.4e-28	100.0
AVG49013.1\|523008_523158_-	transcriptional regulator	A0A1W6JPZ2	Staphylococcus_phage	4.8e-18	100.0
AVG49014.1\|523154_523541_-	hypothetical protein	A0A1X9IGZ2	Staphylococcus_phage	3.0e-64	100.0
AVG49015.1\|523533_523770_-	hypothetical protein	A0A2I6PEM4	Staphylococcus_phage	2.8e-36	100.0
AVG49016.1\|523762_523966_-	hypothetical protein	A0A2I6PEQ8	Staphylococcus_phage	3.4e-30	100.0
AVG49017.1\|523962_524169_-	DUF1381 domain-containing protein	A0A2I6PEM9	Staphylococcus_phage	1.6e-19	100.0
AVG49018.1\|524205_524739_-	dUTPase	A0A2I6PEN6	Staphylococcus_phage	3.3e-93	98.3
AVG49019.1\|525360_525612_-	DUF1024 domain-containing protein	G4KNP4	Staphylococcus_phage	4.1e-38	96.4
AVG49020.1\|525604_525955_-	acetyltransferase	A0A0F6N3K4	Staphylococcus_phage	2.2e-45	90.0
AVG49021.1\|525963_526206_-	hypothetical protein	A0A1P8L6E3	Staphylococcus_phage	1.1e-40	97.5
AVG49022.1\|526209_526578_-	hypothetical protein	A0A0H4J337	Staphylococcus_phage	6.3e-51	98.4
AVG49023.1\|527004_527223_-	hypothetical protein	A0A1P8L6E4	Staphylococcus_phage	1.4e-37	100.0
AVG49024.1\|527229_528099_-	DnaD domain protein	A0EWX4	Staphylococcus_phage	5.9e-132	96.6
AVG49025.1\|528128_528599_-	single-stranded DNA-binding protein	S4V682	Staphylococcus_phage	3.1e-79	96.2
AVG49026.1\|528599_529217_-	MBL fold metallo-hydrolase	A0A1W6JPL3	Staphylococcus_phage	3.5e-86	99.4
AVG49027.1\|529297_530218_-	recombinase	A0A2I6PDH5	Staphylococcus_phage	2.3e-166	100.0
AVG49028.1\|530219_532163_-	ATPase	I1W619	Staphylococcus_phage	0.0e+00	98.6
AVG49029.1\|532171_532435_-	hypothetical protein	A0A2I6PDG2	Staphylococcus_phage	7.7e-43	100.0
AVG49030.1\|532443_532704_-	DUF1108 domain-containing protein	A0EWW8	Staphylococcus_phage	4.4e-43	96.5
AVG49031.1\|532708_533011_-	hypothetical protein	A0A0F6N3N3	Staphylococcus_phage	1.0e-46	97.0
AVG49032.1\|533103_533265_-	DUF1270 domain-containing protein	Q4ZAZ7	Staphylococcus_virus	2.5e-20	100.0
AVG49033.1\|533261_533582_-	DUF771 domain-containing protein	A0A1W6JPI1	Staphylococcus_phage	7.4e-56	100.0
AVG49034.1\|533611_533830_-	hypothetical protein	A0A068A2A3	Staphylococcus_phage	4.3e-31	98.6
AVG49035.1\|533826_534153_-	hypothetical protein	G4KNN2	Staphylococcus_phage	5.4e-54	100.0
AVG49036.1\|534202_534526_+	hypothetical protein	A0ZS13	Staphylococcus_virus	6.5e-52	99.1
AVG49037.1\|534479_534719_-	hypothetical protein	A0ZS12	Staphylococcus_virus	2.9e-33	100.0
AVG49038.1\|534777_534981_+	hypothetical protein	A0A2H4JBA9	uncultured_Caudovirales_phage	9.5e-17	66.1
AVG49039.1\|535097_535841_-	oxidoreductase	A0A0H3U319	Staphylococcus_phage	2.3e-137	100.0
AVG49040.1\|535891_536221_+	hypothetical protein	A0A0H3U4Z1	Staphylococcus_phage	3.9e-52	99.1
AVG49041.1\|536209_536425_-	DUF2829 domain-containing protein	A0A0H3U4C7	Staphylococcus_phage	4.8e-35	100.0
AVG49042.1\|536440_536704_-	XRE family transcriptional regulator	A0A2I6PF09	Staphylococcus_phage	7.2e-41	100.0
AVG49043.1\|536700_536874_-	transcriptional regulator	NA	NA	NA	NA
AVG49044.1\|536836_537550_+	XRE family transcriptional regulator	M9NUL0	Staphylococcus_phage	3.5e-130	99.6
AVG49045.1\|537565_538498_+	ATP-dependent helicase	A0A2I6PEZ7	Staphylococcus_phage	2.8e-172	99.7
AVG49046.1\|538503_538845_+	hypothetical protein	A0A2I6PF04	Staphylococcus_phage	4.6e-56	100.0
AVG49047.1\|539048_539231_+	hypothetical protein	M9NSW6	Staphylococcus_phage	4.1e-27	100.0
AVG49048.1\|539330_539795_+	hypothetical protein	A0EWV3	Staphylococcus_phage	1.1e-28	100.0
AVG49049.1\|539853_540891_+\|integrase	site-specific integrase	A0EWV2	Staphylococcus_phage	1.5e-179	99.7
AVG49050.1\|542011_543028_-	bi-component leukocidin LukGH subunit G	A0A1X9IGW5	Staphylococcus_phage	6.7e-26	30.2
AVG49051.1\|543049_544105_-	bi-component leukocidin LukGH subunit H	A0A1X9IGW5	Staphylococcus_phage	2.8e-35	34.3
553241:553265	attR	NA	NA	NA	NA

DBSCAN-SWA_4

1613175 : 1657547

Staphylococcus_phage(92.86%)

portal,tail,protease,capsid,integrase,terminase,holin,head

attL 1613065:1613082|attR 1657625:1657642

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1613065:1613082	attL	NA	NA	NA	NA
AVG50028.1\|1613175_1614381_-\|integrase	site-specific integrase	A0A1X9H094	Staphylococcus_phage	2.1e-220	98.8
AVG50029.1\|1614506_1615121_+	ATPase	A7TW88	Staphylococcus_phage	7.9e-107	100.0
AVG50030.1\|1615117_1615264_-	hypothetical protein	A0A2I6PEK8	Staphylococcus_phage	1.1e-14	89.6
AVG50031.1\|1615353_1615749_-	hypothetical protein	I1W601	Staphylococcus_phage	1.4e-69	100.0
AVG50032.1\|1615777_1616212_-	hypothetical protein	A0A2I6PEM0	Staphylococcus_phage	3.5e-24	99.3
AVG50033.1\|1616229_1616691_-	toxin	A0A2K9VBR7	Staphylococcus_phage	1.2e-83	100.0
AVG50034.1\|1616703_1617018_-	XRE family transcriptional regulator	A0A0N9BAW4	Staphylococcus_phage	9.8e-53	100.0
AVG50035.1\|1617169_1617406_+	XRE family transcriptional regulator	A0A2I6PD81	Staphylococcus_phage	1.5e-37	100.0
AVG50036.1\|1617419_1618196_+	transcriptional regulator	A0A2I6PD87	Staphylococcus_phage	1.4e-140	99.6
AVG50037.1\|1618224_1618368_+	hypothetical protein	W5R8I6	Staphylococcus_phage	2.5e-16	100.0
AVG50038.1\|1618357_1618567_-	hypothetical protein	W5R9J5	Staphylococcus_phage	1.2e-30	100.0
AVG50039.1\|1618622_1618868_+	DUF2829 domain-containing protein	A0A2I6PF15	Staphylococcus_phage	5.1e-41	100.0
AVG50040.1\|1618836_1619202_-	hypothetical protein	A0A2I6PF07	Staphylococcus_phage	1.2e-62	99.2
AVG50041.1\|1619256_1619472_+	hypothetical protein	A0A2I6PF01	Staphylococcus_phage	1.9e-31	100.0
AVG50042.1\|1619496_1619760_+	helix-turn-helix domain-containing protein	A7TWG0	Staphylococcus_phage	5.7e-46	100.0
AVG50043.1\|1619773_1619935_+	DUF1270 domain-containing protein	A0A2H4PQQ1	Staphylococcus_phage	1.2e-19	98.1
AVG50044.1\|1620026_1620287_+	DUF1108 domain-containing protein	Q4ZDA1	Staphylococcus_virus	1.2e-43	100.0
AVG50045.1\|1620296_1620518_+	DUF2483 domain-containing protein	A7TWM6	Staphylococcus_phage	3.2e-34	100.0
AVG50046.1\|1620510_1621134_+	DUF1071 domain-containing protein	A0A2H4PQQ6	Staphylococcus_phage	1.4e-114	100.0
AVG50047.1\|1621133_1621562_+	single-stranded DNA-binding protein	B2ZYV4	Staphylococcus_phage	3.9e-60	100.0
AVG50048.1\|1621575_1622250_+	hypothetical protein	A0A0E3XBQ6	Staphylococcus_phage	5.8e-127	98.2
AVG50049.1\|1622356_1623205_-	DUF4393 domain-containing protein	W5R9J9	Staphylococcus_phage	1.1e-159	99.6
AVG50050.1\|1623268_1623982_+	helix-turn-helix domain-containing protein	A0A1J0MGB2	Staphylococcus_phage	9.2e-91	79.3
AVG50051.1\|1623991_1624771_+	DNA replication protein DnaC	Q9G022	Staphylococcus_virus	2.4e-145	100.0
AVG50052.1\|1624938_1625160_+	hypothetical protein	A7TWN4	Staphylococcus_phage	1.3e-35	100.0
AVG50053.1\|1625578_1625764_+	DUF3113 domain-containing protein	A0A0H3U473	Staphylococcus_phage	4.1e-27	100.0
AVG50054.1\|1625764_1626382_+	hypothetical protein	A0A0H3U4U9	Staphylococcus_phage	4.2e-84	100.0
AVG50055.1\|1626381_1626636_+	DUF3310 domain-containing protein	Q6R831	Staphylococcus_virus	1.3e-42	100.0
AVG50056.1\|1626635_1626884_+	hypothetical protein	A0A2K9VBX5	Staphylococcus_phage	1.2e-40	100.0
AVG50057.1\|1626897_1627104_+	hypothetical protein	A0A0N9BAW9	Staphylococcus_phage	3.0e-34	100.0
AVG50058.1\|1627106_1627511_+	hypothetical protein	A0A0E3T8H9	Staphylococcus_phage	4.2e-72	100.0
AVG50059.1\|1627507_1627702_+	hypothetical protein	A0A0E3XCV8	Staphylococcus_phage	2.5e-27	100.0
AVG50060.1\|1628066_1628456_+	acetyltransferase	I1W604	Staphylococcus_phage	1.4e-69	100.0
AVG50061.1\|1628448_1628697_+	DUF1024 domain-containing protein	A0A2I6PEP2	Staphylococcus_phage	1.8e-38	98.8
AVG50062.1\|1628689_1629226_+	dUTPase	A0A2I6PEN6	Staphylococcus_phage	1.6e-95	100.0
AVG50063.1\|1629262_1629469_+	DUF1381 domain-containing protein	A0A2I6PEM9	Staphylococcus_phage	1.6e-19	100.0
AVG50064.1\|1629465_1629669_+	hypothetical protein	A0A2I6PEQ8	Staphylococcus_phage	3.4e-30	100.0
AVG50065.1\|1629661_1629898_+	hypothetical protein	A0A2I6PEM4	Staphylococcus_phage	2.8e-36	100.0
AVG50066.1\|1629881_1630277_+	hypothetical protein	A7TWI1	Staphylococcus_phage	8.2e-65	99.2
AVG50067.1\|1630273_1630426_+	transcriptional regulator	A0A2I6PEM5	Staphylococcus_phage	2.0e-19	100.0
AVG50068.1\|1630493_1630694_+	DUF1514 domain-containing protein	A0A2I6PEP5	Staphylococcus_phage	4.9e-26	100.0
AVG50069.1\|1630720_1630927_-	hypothetical protein	A0A1X9IGZ9	Staphylococcus_phage	7.6e-30	100.0
AVG50070.1\|1630981_1632253_+	hypothetical protein	A0A2I6PEP4	Staphylococcus_phage	6.0e-133	96.3
AVG50071.1\|1632265_1632703_+	transcriptional regulator	A0A2I6PDN2	Staphylococcus_phage	6.1e-77	100.0
AVG50072.1\|1632864_1633179_+	HNH endonuclease	A0A2I6PDR3	Staphylococcus_phage	8.5e-57	100.0
AVG50073.1\|1633304_1633610_+\|terminase	phage terminase small subunit P27 family	A0A2I6PDN6	Staphylococcus_phage	3.7e-49	100.0
AVG50074.1\|1633599_1635291_+\|terminase	terminase large subunit	A0A2I6PDP8	Staphylococcus_phage	0.0e+00	99.8
AVG50075.1\|1635295_1636534_+\|portal	phage portal protein	A0A2I6PEA6	Staphylococcus_phage	6.9e-235	100.0
AVG50076.1\|1636517_1637291_+\|protease	Clp protease ClpP	A0A2I6PE26	Staphylococcus_phage	4.9e-138	100.0
AVG51270.1\|1637302_1638466_+\|capsid	phage major capsid protein	A0A2I6PE62	Staphylococcus_phage	3.6e-217	100.0
AVG50077.1\|1638534_1638813_+\|head,tail	phage gp6-like head-tail connector protein	A0A2I6PE36	Staphylococcus_phage	2.1e-46	100.0
AVG50078.1\|1638824_1639157_+	hypothetical protein	A0A2I6PDD6	Staphylococcus_phage	6.2e-58	100.0
AVG50079.1\|1639153_1639555_+	hypothetical protein	A0A2I6PDD3	Staphylococcus_phage	6.2e-68	100.0
AVG50080.1\|1639555_1639951_+	DUF3168 domain-containing protein	A0A2I6PDD8	Staphylococcus_phage	2.6e-66	100.0
AVG50081.1\|1639985_1640627_+\|tail	phage tail protein	A0A2I6PE59	Staphylococcus_phage	1.0e-120	100.0
AVG50082.1\|1640718_1641174_+\|tail	phage tail protein	A0A2I6PER6	Staphylococcus_phage	5.7e-78	100.0
AVG50083.1\|1641231_1641582_+	hypothetical protein	A0A2I6PEQ2	Staphylococcus_phage	1.1e-55	100.0
AVG50084.1\|1641623_1641782_+	hypothetical protein	A0A2I6PES8	Staphylococcus_phage	1.2e-19	100.0
AVG50085.1\|1641795_1647996_+\|tail	phage tail tape measure protein	A0A1X9IGU9	Staphylococcus_phage	0.0e+00	99.9
AVG50086.1\|1647995_1648820_+\|tail	phage tail family protein	A0A2I6PER3	Staphylococcus_phage	4.1e-159	100.0
AVG50087.1\|1648828_1650412_+	peptidase	Q8SDP1	Staphylococcus_virus	7.1e-309	100.0
AVG50088.1\|1650411_1650702_+	hypothetical protein	A0A2I6PF46	Staphylococcus_phage	2.1e-49	100.0
AVG50089.1\|1650717_1652628_+	hypothetical protein	A0A2I6PF35	Staphylococcus_phage	0.0e+00	99.8
AVG50090.1\|1652627_1654094_+	DUF2479 domain-containing protein	A0A2I6PEI6	Staphylococcus_phage	2.4e-271	99.0
AVG50091.1\|1654093_1654483_+	hypothetical protein	A0A2I6PER1	Staphylococcus_phage	2.2e-62	100.0
AVG50092.1\|1654475_1654640_+	XkdX family protein	A0A2I6PES4	Staphylococcus_phage	4.9e-24	100.0
AVG50093.1\|1654685_1654985_+	DUF2951 domain-containing protein	M9QRV2	Staphylococcus_phage	5.9e-31	98.0
AVG50094.1\|1655120_1655423_+\|holin	phage holin	A0A2I6PET6	Staphylococcus_phage	7.0e-48	100.0
AVG50095.1\|1655434_1656889_+	CHAP domain-containing protein	B7T0L1	Staphylococcus_virus	2.5e-284	98.6
AVG50096.1\|1657247_1657547_+	hypothetical protein	A7TWL2	Staphylococcus_phage	8.4e-46	94.7
1657625:1657642	attR	NA	NA	NA	NA

DBSCAN-SWA_5

2071367 : 2082018

uncultured_Caudovirales_phage(62.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVG50483.1\|2071367_2072873_-	peptide MFS transporter	A0A0P0IY73	Acinetobacter_phage	2.0e-58	32.2
AVG50484.1\|2072953_2073199_-	hypothetical protein	NA	NA	NA	NA
AVG50485.1\|2073228_2073729_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	E7DN65	Pneumococcus_phage	5.9e-52	71.5
AVG50486.1\|2073748_2074615_-	EamA/RhaT family transporter	NA	NA	NA	NA
AVG50487.1\|2074999_2075266_+	ribonucleoside-diphosphate reductase	NA	NA	NA	NA
AVG50488.1\|2075415_2075814_+	protein NrdI	A0A2H4J545	uncultured_Caudovirales_phage	1.2e-52	72.0
AVG50489.1\|2075776_2077882_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	A0A2H4J2N6	uncultured_Caudovirales_phage	0.0e+00	91.7
AVG50490.1\|2077999_2078971_+	class 1b ribonucleoside-diphosphate reductase subunit beta	A0A2H4J4P3	uncultured_Caudovirales_phage	4.2e-171	91.3
AVG50491.1\|2079151_2079307_+	hypothetical protein	NA	NA	NA	NA
AVG51288.1\|2079345_2080317_+	iron ABC transporter permease	A0A2H4IY97	uncultured_Caudovirales_phage	4.3e-139	78.9
AVG50492.1\|2080303_2081260_+	iron ABC transporter permease	A0A2H4J116	uncultured_Caudovirales_phage	1.2e-05	57.8
AVG50493.1\|2081256_2082018_+	iron ABC transporter ATP-binding protein	Q9EMR9	Amsacta_moorei_entomopoxvirus	6.5e-18	31.6

DBSCAN-SWA_6

2167550 : 2213192

Staphylococcus_phage(83.82%)

portal,tail,plate,capsid,integrase,terminase,holin,head

attL 2165638:2165654|attR 2199103:2199119

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2165638:2165654	attL	NA	NA	NA	NA
AVG50583.1\|2167550_2168792_+	cysteine desulfurase	Q2XUY6	environmental_halophage	8.2e-111	44.8
AVG50584.1\|2168781_2169246_+	SUF system NifU family Fe-S cluster assembly protein	NA	NA	NA	NA
AVG50585.1\|2169396_2170794_+	Fe-S cluster assembly protein SufB	NA	NA	NA	NA
AVG50586.1\|2170861_2171911_-\|integrase	site-specific integrase	A1KWY3	Staphylococcus_virus	4.5e-203	99.7
AVG50587.1\|2172023_2172203_+	excisionase	A0EWN7	Staphylococcus_virus	8.3e-25	100.0
AVG50588.1\|2172182_2173115_-	hypothetical protein	A0EWN8	Staphylococcus_virus	3.9e-174	100.0
AVG50589.1\|2173146_2173608_-	ImmA/IrrE family metallo-endopeptidase	A0A0H4J322	Staphylococcus_phage	1.6e-64	81.7
AVG50590.1\|2173619_2173952_-	XRE family transcriptional regulator	A0A1J0MFC1	Staphylococcus_phage	4.7e-37	73.6
AVG50591.1\|2174144_2174384_+	XRE family transcriptional regulator	A0A2H4J9X2	uncultured_Caudovirales_phage	2.6e-37	96.2
AVG50592.1\|2174398_2175187_+	phage antirepressor	R9QSV3	Staphylococcus_phage	1.2e-144	100.0
AVG50593.1\|2175203_2175398_+	hypothetical protein	Q4ZDS1	Staphylococcus_virus	4.6e-21	90.5
AVG50594.1\|2175428_2175572_+	hypothetical protein	A0A2I6PDG0	Staphylococcus_phage	1.8e-14	91.3
AVG50595.1\|2175592_2176150_-	hypothetical protein	A0A2H4IYS4	uncultured_Caudovirales_phage	1.7e-47	54.5
AVG50596.1\|2176220_2176442_+	hypothetical protein	A0A0F6N3I2	Staphylococcus_phage	9.6e-31	97.3
AVG50597.1\|2176434_2176596_+	DUF1270 domain-containing protein	A0A2H4PQQ1	Staphylococcus_phage	3.3e-20	100.0
AVG50598.1\|2176687_2176948_+	DUF1108 domain-containing protein	Q4ZBM7	Staphylococcus_phage	1.2e-43	100.0
AVG50599.1\|2176957_2177179_+	DUF2483 domain-containing protein	A7TWM6	Staphylococcus_phage	3.2e-34	100.0
AVG50600.1\|2177171_2177795_+	DUF1071 domain-containing protein	A0A2H4PQQ6	Staphylococcus_phage	1.4e-114	100.0
AVG50601.1\|2177794_2178223_+	single-stranded DNA-binding protein	B2ZYV4	Staphylococcus_phage	3.9e-60	100.0
AVG50602.1\|2178236_2178911_+	hypothetical protein	R4IH15	Staphylococcus_phage	1.4e-125	96.9
AVG50603.1\|2179049_2179331_-	hypothetical protein	A0A1W6JPU7	Staphylococcus_phage	2.6e-49	100.0
AVG51291.1\|2179396_2180167_+	replication protein	G4KNP0	Staphylococcus_phage	6.4e-122	100.0
AVG50604.1\|2180176_2180956_+	DNA replication protein DnaC	G4KNP1	Staphylococcus_phage	3.8e-146	100.0
AVG50605.1\|2180949_2181108_+	hypothetical protein	A0A2H4PQI7	Staphylococcus_phage	4.5e-22	100.0
AVG50606.1\|2181120_2181342_+	hypothetical protein	A0A0H3U2V4	Staphylococcus_phage	2.2e-35	100.0
AVG50607.1\|2181351_2181756_+	DUF1064 domain-containing protein	A1KX76	Staphylococcus_virus	9.6e-69	100.0
AVG50608.1\|2181760_2181946_+	hypothetical protein	A0A0F6N3K7	Staphylococcus_phage	1.1e-27	100.0
AVG50609.1\|2181946_2182252_+	hypothetical protein	A0A0F6N4H9	Staphylococcus_phage	1.7e-49	100.0
AVG50610.1\|2182379_2182736_+	hypothetical protein	A0A0F6N3E3	Staphylococcus_phage	1.9e-60	99.2
AVG50611.1\|2182739_2182982_+	hypothetical protein	A0A0F6N3E1	Staphylococcus_phage	6.6e-41	100.0
AVG50612.1\|2182990_2183362_+	acetyltransferase	A0A0F6N3K4	Staphylococcus_phage	3.6e-54	100.0
AVG50613.1\|2183354_2183609_+	DUF1024 domain-containing protein	A0A0H3U469	Staphylococcus_phage	5.0e-39	100.0
AVG50614.1\|2183758_2184295_+	dUTPase	A0A0H3U2Z8	Staphylococcus_phage	2.7e-95	99.4
AVG50615.1\|2184331_2184538_+	DUF1381 domain-containing protein	A0A0F6N4I4	Staphylococcus_phage	1.1e-20	100.0
AVG50616.1\|2184534_2184729_+	hypothetical protein	S4SX95	Staphylococcus_phage	7.9e-29	100.0
AVG50617.1\|2184725_2184929_+	hypothetical protein	B2ZYX5	Staphylococcus_phage	8.8e-31	98.5
AVG50618.1\|2184921_2185095_+	transcriptional regulator	A0A0F6N3E7	Staphylococcus_phage	2.2e-22	100.0
AVG50619.1\|2185095_2185242_+	hypothetical protein	B2ZYX7	Staphylococcus_phage	2.2e-15	100.0
AVG50620.1\|2185265_2185688_+	DUF1492 domain-containing protein	A0A0F6N3E5	Staphylococcus_phage	1.2e-74	100.0
AVG51292.1\|2185875_2186370_+\|terminase	terminase small subunit	A0A0F6N3K6	Staphylococcus_phage	7.8e-89	100.0
AVG50621.1\|2186372_2187668_+\|terminase	PBSX family phage terminase large subunit	A0A0F6N3L3	Staphylococcus_phage	3.0e-257	100.0
AVG50622.1\|2187678_2189217_+\|portal	phage portal protein	A0A0F6N4I8	Staphylococcus_phage	2.4e-293	100.0
AVG50623.1\|2189223_2190219_+\|head	phage head morphogenesis protein	A0A0F6N3F1	Staphylococcus_phage	2.0e-184	100.0
AVG50624.1\|2190291_2190462_+	hypothetical protein	A0A0F6N3E9	Staphylococcus_phage	1.5e-23	100.0
AVG50625.1\|2190570_2191191_+	DUF4355 domain-containing protein	S4V984	Staphylococcus_phage	1.7e-69	98.5
AVG50626.1\|2191204_2192179_+\|capsid	phage major capsid protein	E0Y3L0	Staphylococcus_virus	2.2e-183	100.0
AVG50627.1\|2192200_2192488_+	hypothetical protein	S4V6D9	Staphylococcus_phage	1.4e-45	98.9
AVG50628.1\|2192496_2192829_+\|head,tail	phage head-tail adapter protein	A0A0F6N3F4	Staphylococcus_phage	5.5e-54	100.0
AVG50629.1\|2192825_2193128_+	hypothetical protein	A4ZFB6	Staphylococcus_virus	1.1e-50	100.0
AVG50630.1\|2193127_2193475_+	hypothetical protein	A0A0F6N3F5	Staphylococcus_phage	4.1e-60	100.0
AVG50631.1\|2193486_2193870_+	hypothetical protein	B2ZYZ0	Staphylococcus_phage	2.6e-68	100.0
AVG50632.1\|2194531_2194897_+\|tail	phage tail protein	A0A0F6N4J9	Staphylococcus_phage	1.8e-58	99.2
AVG50633.1\|2194926_2195271_+	hypothetical protein	A0A0F6N3F7	Staphylococcus_phage	2.5e-57	100.0
AVG50634.1\|2195287_2198755_+	hypothetical protein	A0A0F6N3F9	Staphylococcus_phage	4.2e-245	100.0
AVG50635.1\|2198767_2199715_+\|tail	phage tail family protein	A0A0F6N3L4	Staphylococcus_phage	2.8e-183	100.0
2199103:2199119	attR	NA	NA	NA	NA
AVG50636.1\|2199723_2201622_+	peptidase	A0A0F6N3M1	Staphylococcus_phage	0.0e+00	100.0
AVG50637.1\|2201636_2203547_+	hypothetical protein	A0A0F6N4K2	Staphylococcus_phage	0.0e+00	99.8
AVG50638.1\|2203546_2205370_+\|plate	phage baseplate upper protein	A0A0F6N3G2	Staphylococcus_phage	0.0e+00	99.8
AVG50639.1\|2205369_2205747_+	hypothetical protein	A0A0F6N3G4	Staphylococcus_phage	1.5e-60	100.0
AVG50640.1\|2205750_2205924_+	XkdX family protein	A0A0F6N3L7	Staphylococcus_phage	6.6e-27	100.0
AVG51293.1\|2205963_2206263_+	hypothetical protein	A0A0F6N3M6	Staphylococcus_phage	9.9e-47	100.0
AVG50641.1\|2206399_2208298_+	CHAP domain-containing protein	A0A0F6N4K6	Staphylococcus_phage	0.0e+00	100.0
AVG50642.1\|2208310_2209549_+	DUF2479 domain-containing protein	E0Y3M8	Staphylococcus_virus	5.0e-209	99.3
AVG50643.1\|2209554_2209950_+	hypothetical protein	A0A2H4PQP8	Staphylococcus_phage	1.8e-67	99.2
AVG50644.1\|2210005_2210281_+\|holin	phage holin	A0A0F6N3M0	Staphylococcus_phage	8.6e-45	100.0
AVG50645.1\|2210267_2211680_+	CHAP domain-containing protein	A0A0F6N3N1	Staphylococcus_phage	5.8e-286	100.0
AVG50646.1\|2211739_2212297_-	hypothetical protein	A0A0F6N4L1	Staphylococcus_phage	7.4e-96	100.0
AVG50647.1\|2212671_2212824_+	hypothetical protein	A0A0F6N3H2	Staphylococcus_phage	3.1e-20	100.0
AVG50648.1\|2212894_2213005_+	hypothetical protein	W5R8J7	Staphylococcus_phage	1.7e-12	100.0
AVG50649.1\|2212991_2213192_+	hypothetical protein	W5R9N2	Staphylococcus_phage	3.7e-29	100.0

DBSCAN-SWA_7

2296276 : 2349400

Streptococcus_phage(28.57%)

bacteriocin,protease,tRNA,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVG50728.1\|2296276_2297266_-\|tRNA	tryptophan--tRNA ligase	NA	NA	NA	NA
AVG50729.1\|2297559_2297955_+	transcriptional regulator Spx	NA	NA	NA	NA
AVG50730.1\|2298325_2299045_+	adaptor protein MecA	NA	NA	NA	NA
AVG50731.1\|2299165_2300152_+	competence protein CoiA	NA	NA	NA	NA
AVG50732.1\|2300199_2302008_+	oligoendopeptidase F	A0A1X9I5X5	Streptococcus_phage	5.5e-47	24.5
AVG50733.1\|2302467_2303274_-	DsbA family protein	NA	NA	NA	NA
AVG50734.1\|2303296_2303662_-	globin	NA	NA	NA	NA
AVG50735.1\|2303765_2304359_-	CYTH domain-containing protein	NA	NA	NA	NA
AVG50736.1\|2304544_2304892_+	hypothetical protein	NA	NA	NA	NA
AVG50737.1\|2304908_2305544_+	GTP pyrophosphokinase family protein	NA	NA	NA	NA
AVG50738.1\|2305560_2306370_+	NAD(+) kinase	NA	NA	NA	NA
AVG50739.1\|2306366_2307221_+	RluA family pseudouridine synthase	NA	NA	NA	NA
AVG50740.1\|2307241_2308627_+	magnesium transporter	NA	NA	NA	NA
AVG50741.1\|2308636_2310481_+	sodium:proton antiporter	NA	NA	NA	NA
AVG50742.1\|2310758_2311529_+	enoyl-[acyl-carrier-protein] reductase FabI	NA	NA	NA	NA
AVG50743.1\|2311725_2312811_-	AI-2E family transporter	NA	NA	NA	NA
AVG50744.1\|2313152_2314721_+	alanine:cation symporter family protein	NA	NA	NA	NA
AVG50745.1\|2314865_2315624_+	esterase family protein	NA	NA	NA	NA
AVG50746.1\|2315817_2316327_+	hypothetical protein	NA	NA	NA	NA
AVG50747.1\|2316439_2317648_-	MFS transporter	NA	NA	NA	NA
AVG50748.1\|2317607_2318783_-	diacylglycerol beta-glucosyltransferase	NA	NA	NA	NA
AVG50749.1\|2319215_2320700_+	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L- lysine ligase	NA	NA	NA	NA
AVG50750.1\|2320680_2320941_+	hypothetical protein	NA	NA	NA	NA
AVG50751.1\|2320940_2322503_+	peptide chain release factor 3	A0A1S5SF82	Streptococcus_phage	2.2e-36	28.2
AVG50752.1\|2322804_2323608_+	hypothetical protein	S5MAL1	Bacillus_phage	1.6e-30	40.5
AVG50753.1\|2323826_2326151_+	PDZ domain-containing protein	W5SAB9	Pithovirus	2.8e-11	27.4
AVG50754.1\|2326167_2327526_+	Ktr system potassium uptake protein D	NA	NA	NA	NA
AVG50755.1\|2327664_2329176_+	bifunctional metallophosphatase/5'-nucleotidase	NA	NA	NA	NA
AVG50756.1\|2329662_2330232_-	competence protein ComK	NA	NA	NA	NA
AVG50757.1\|2330441_2330660_+	IDEAL domain-containing protein	NA	NA	NA	NA
AVG50758.1\|2330740_2331727_-	lipoate--protein ligase	NA	NA	NA	NA
AVG50759.1\|2331925_2332102_+	DUF2187 domain-containing protein	NA	NA	NA	NA
AVG50760.1\|2332116_2332719_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
AVG51295.1\|2333018_2333096_+\|holin	putative holin-like toxin	NA	NA	NA	NA
AVG50761.1\|2333634_2333736_+	hypothetical protein	NA	NA	NA	NA
AVG51296.1\|2333745_2334018_+\|bacteriocin	lactococcin 972 family bacteriocin	NA	NA	NA	NA
AVG50762.1\|2334061_2336026_+	DUF1430 domain-containing protein	NA	NA	NA	NA
AVG50763.1\|2336028_2336349_+	hypothetical protein	NA	NA	NA	NA
AVG50764.1\|2336345_2336987_+\|bacteriocin	bacteriocin ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.7e-19	33.0
AVG50765.1\|2337074_2337365_-	hypothetical protein	NA	NA	NA	NA
AVG50766.1\|2337505_2337643_+	poly(glycerol-phosphate) alpha-glucosyltransferase	NA	NA	NA	NA
AVG50767.1\|2337731_2338088_-	DoxX family protein	NA	NA	NA	NA
AVG50768.1\|2338575_2339535_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AVG50769.1\|2339580_2339712_-	hypothetical protein	NA	NA	NA	NA
AVG50770.1\|2339775_2340066_-	NINE protein	A0A060AN66	Enterococcus_phage	7.5e-07	38.0
AVG50771.1\|2340155_2340707_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
AVG50772.1\|2340758_2341697_-	1,4-dihydroxy-2-naphthoate polyprenyltransferase	NA	NA	NA	NA
AVG50773.1\|2341847_2341952_+	hypothetical protein	NA	NA	NA	NA
AVG50774.1\|2342028_2343240_+	isochorismate synthase	NA	NA	NA	NA
AVG50775.1\|2343226_2344900_+	2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase	NA	NA	NA	NA
AVG50776.1\|2344886_2345690_+	2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase	NA	NA	NA	NA
AVG50777.1\|2345682_2346504_+	1,4-dihydroxy-2-naphthoyl-CoA synthase	NA	NA	NA	NA
AVG50778.1\|2346741_2347071_-	staphostatin B	NA	NA	NA	NA
AVG50779.1\|2347108_2348290_-\|protease	cysteine protease staphopain B	NA	NA	NA	NA
AVG50780.1\|2348371_2349400_-\|protease	serine protease	A0A2H4PQP7	Staphylococcus_phage	6.3e-16	32.3

DBSCAN-SWA_8

2368444 : 2376917

Synechococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVG50796.1\|2368444_2368927_+	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	6.2e-22	44.7
AVG50797.1\|2368913_2370038_+	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA
AVG50798.1\|2370041_2370746_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	M4R1E8	Synechococcus_phage	7.3e-48	42.1
AVG50799.1\|2370745_2371009_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA
AVG50800.1\|2371010_2371682_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA
AVG50801.1\|2371674_2373864_+	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	3.5e-141	39.8
AVG50802.1\|2373842_2375327_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	1.9e-45	31.7
AVG50803.1\|2375319_2376348_+	phosphoribosylformylglycinamidine cyclo-ligase	Q58MH8	Prochlorococcus_phage	3.4e-62	41.7
AVG50804.1\|2376350_2376917_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	6.1e-29	40.1

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage