CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP014057	Staphylococcus saprophyticus strain FDAARGOS_137, complete genome	0 crisprs	csa3,WYL,DEDDh,cas3,DinG	0	0	10	0
CP014058	Staphylococcus saprophyticus strain FDAARGOS_137 plasmid, complete sequence	0 crisprs	NA	0	0	4	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

901607 : 918103

Staphylococcus_phage(58.82%)

integrase,protease,terminase

attL 903563:903582|attR 919873:919892

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AMG33019.1\|901607_901895_+	co-chaperone GroES	A0A221S386	uncultured_virus	1.8e-13	48.4
AMG33020.1\|901957_903580_+	molecular chaperone GroEL	A0A240F779	uncultured_virus	5.4e-155	53.4
903563:903582	attL	NA	NA	NA	NA
AMG33021.1\|903647_904817_-\|integrase	site-specific integrase	A0A1W6JPB2	Staphylococcus_phage	2.4e-176	78.4
AMG33022.1\|904837_905584_-	transcriptional regulator	NA	NA	NA	NA
AMG33023.1\|905751_905970_+	XRE family transcriptional regulator	A0A2H4JB11	uncultured_Caudovirales_phage	2.7e-17	59.7
AMG33024.1\|905973_906282_+	helix-turn-helix domain-containing protein	A0A1W6JPE8	Staphylococcus_phage	1.1e-35	75.5
AMG33025.1\|906278_906467_+	hypothetical protein	NA	NA	NA	NA
AMG33026.1\|906468_906783_+	hypothetical protein	NA	NA	NA	NA
AMG33027.1\|906883_907771_+	mobile element-associated protein	A0A1W6JQL5	Staphylococcus_phage	3.2e-77	50.3
AMG33028.1\|907784_909512_+	DUF927 domain-containing protein	Q4ZE73	Staphylococcus_phage	4.0e-132	43.4
AMG34534.2\|910013_910256_+	hypothetical protein	NA	NA	NA	NA
AMG33029.1\|910340_910547_+	hypothetical protein	NA	NA	NA	NA
AMG33030.1\|910560_911178_+	hypothetical protein	A0A1W6JPC6	Staphylococcus_phage	4.9e-56	55.5
AMG33031.1\|911189_911663_+	hypothetical protein	A0A1W6JPF7	Staphylococcus_phage	3.5e-30	43.9
AMG33032.1\|912831_913305_+\|terminase	phage terminase small subunit P27 family	A0A2H4JB21	uncultured_Caudovirales_phage	2.3e-53	71.3
AMG33033.1\|913345_913882_+	pathogenicity island protein	A0A2H4JB26	uncultured_Caudovirales_phage	4.6e-42	49.7
AMG34535.1\|913926_914205_+	hypothetical protein	A0A2H4JEA5	uncultured_Caudovirales_phage	4.8e-19	46.7
AMG33034.1\|914201_914537_+	hypothetical protein	NA	NA	NA	NA
AMG33035.1\|914704_915673_+\|protease	CAAX protease	NA	NA	NA	NA
AMG33036.1\|915774_915966_+	hypothetical protein	U3PCX8	Staphylococcus_phage	1.0e-28	92.1
AMG33037.1\|915975_916386_+	YolD-like family protein	U3PG23	Staphylococcus_phage	1.7e-73	98.5
AMG34536.2\|916414_916903_-	ATP-binding protein	A0A2H4JFX6	uncultured_Caudovirales_phage	3.2e-87	100.0
AMG33038.1\|917085_917589_-	hypothetical protein	A0A0H3U2S7	Staphylococcus_phage	1.1e-26	67.7
AMG33039.1\|917581_918103_-	hypothetical protein	A0A0H3U494	Staphylococcus_phage	1.0e-83	83.2
919873:919892	attR	NA	NA	NA	NA

DBSCAN-SWA_2

1042939 : 1057166

Staphylococcus_phage(92.31%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AMG33154.1\|1042939_1044322_+	o-succinylbenzoate--CoA ligase	A0A2H4PQM9	Staphylococcus_phage	5.3e-167	61.3
AMG33155.2\|1044356_1045346_+	o-succinylbenzoate synthase	A0A2H4PQM0	Staphylococcus_phage	3.2e-89	49.5
AMG33156.1\|1045335_1045587_-	membrane protein insertion efficiency factor YidD	A0A2H4PQM5	Staphylococcus_phage	4.2e-30	81.1
AMG33157.1\|1045646_1046123_+	nucleoside triphosphatase YtkD	A0A2H4PQM4	Staphylococcus_phage	4.8e-43	53.5
AMG34538.1\|1046130_1046898_+	S9 family peptidase	A0A2H4PQM6	Staphylococcus_phage	3.1e-100	71.4
AMG33158.1\|1046993_1048583_-	phosphoenolpyruvate carboxykinase (ATP)	A0A2H4PQN1	Staphylococcus_phage	8.5e-262	81.8
AMG33159.1\|1048971_1050168_+	S-adenosylmethionine synthase	A0A2H4PQS6	Staphylococcus_phage	1.8e-195	86.6
AMG33160.1\|1050266_1051175_+	hypothetical protein	A0A2H4PQQ8	Staphylococcus_phage	1.1e-101	75.8
AMG33161.1\|1051344_1052181_+	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	4.2e-111	68.2
AMG33162.1\|1052451_1052808_-	camphor resistance protein CrcB	NA	NA	NA	NA
AMG33163.1\|1052804_1053170_-	fluoride efflux transporter CrcB	A0A2H4PQR0	Staphylococcus_phage	3.3e-36	62.8
AMG33164.1\|1053380_1053686_-	hypothetical protein	NA	NA	NA	NA
AMG33165.1\|1053970_1054684_+	transaldolase	E3SKN5	Synechococcus_phage	2.9e-20	36.3
AMG33166.1\|1055799_1056249_+	hypothetical protein	A0A2H4PQT8	Staphylococcus_phage	1.3e-21	47.5
AMG33167.1\|1056256_1056682_-	hypothetical protein	NA	NA	NA	NA
AMG33168.1\|1056695_1057166_-	sigma-70 family RNA polymerase sigma factor	A0A2H4PQT5	Staphylococcus_phage	2.2e-24	44.4

DBSCAN-SWA_3

1061611 : 1078699

Staphylococcus_phage(100.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AMG33172.1\|1061611_1063078_+	pyridine nucleotide-disulfide oxidoreductase	A0A2H4PQX2	Staphylococcus_phage	5.5e-13	58.6
AMG33173.1\|1063619_1064663_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A2H4PQS8	Staphylococcus_phage	1.0e-130	64.4
AMG33174.1\|1064669_1065302_+	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	5.0e-72	64.8
AMG33175.1\|1065313_1066495_+	riboflavin biosynthesis protein RibBA	A0A2H4PQS2	Staphylococcus_phage	4.2e-165	71.2
AMG33176.1\|1066508_1066967_+	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	6.6e-58	76.3
AMG33177.1\|1067231_1068233_-	proline dehydrogenase	A0A2H4PQT6	Staphylococcus_phage	7.3e-126	68.5
AMG33178.1\|1068499_1069324_+	alpha/beta hydrolase	NA	NA	NA	NA
AMG33179.1\|1069559_1070516_+	L-lactate dehydrogenase	NA	NA	NA	NA
AMG33180.1\|1070667_1071069_+	transcriptional regulator	NA	NA	NA	NA
AMG33181.1\|1071187_1071748_-	methyltransferase domain-containing protein	A0A2H4PQV0	Staphylococcus_phage	9.5e-67	63.8
AMG33182.1\|1071744_1072698_-	TIGR01212 family radical SAM protein	A0A2H4PQV5	Staphylococcus_phage	7.3e-67	83.3
AMG33183.1\|1072807_1073977_+	MFS transporter	A0A2H4PQR6	Staphylococcus_phage	2.0e-167	77.4
AMG33184.1\|1074505_1076920_+\|tRNA	leucine--tRNA ligase	A0A2H4PQS0	Staphylococcus_phage	0.0e+00	85.6
AMG33185.1\|1076938_1077250_+	rhodanese-like domain-containing protein	A0A2H4PQR9	Staphylococcus_phage	4.5e-34	68.9
AMG33186.1\|1077430_1078699_-	NAD(P)/FAD-dependent oxidoreductase	A0A2H4PQX1	Staphylococcus_phage	1.5e-38	77.2

DBSCAN-SWA_4

1200469 : 1209594

uncultured_Mediterranean_phage(50.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AMG33289.1\|1200469_1201474_+	Holliday junction branch migration DNA helicase RuvB	B3GAM6	uncultured_virus	1.7e-05	29.9
AMG33290.1\|1201476_1202502_+\|tRNA	S-adenosylmethionine:tRNA ribosyltransferase-isomerase	NA	NA	NA	NA
AMG33291.1\|1202522_1203668_+\|tRNA	tRNA guanosine(34) transglycosylase Tgt	A0A1B1IVQ4	uncultured_Mediterranean_phage	2.5e-85	45.0
AMG33292.1\|1203683_1203944_+	preprotein translocase subunit YajC	A0A1B1IVR5	uncultured_Mediterranean_phage	7.4e-06	44.1
AMG33293.1\|1204325_1206602_+	protein translocase subunit SecDF	A0A1B1IVP7	uncultured_Mediterranean_phage	1.7e-29	34.6
AMG33294.1\|1206783_1209063_+	single-stranded-DNA-specific exonuclease RecJ	A7KV88	Bacillus_phage	2.9e-69	29.4
AMG33295.1\|1209075_1209594_+	adenine phosphoribosyltransferase	A0A1V0SKE5	Klosneuvirus	6.6e-30	46.2

DBSCAN-SWA_5

1335896 : 1345863

uncultured_Mediterranean_phage(28.57%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AMG33422.1\|1335896_1336784_+	site-specific tyrosine recombinase XerD	A0A0K2CP59	Brevibacillus_phage	5.1e-38	31.4
AMG33423.1\|1336851_1337358_-	DUF309 domain-containing protein	NA	NA	NA	NA
AMG33424.1\|1337449_1338184_+	segregation and condensation protein A	A0A1B1IVW1	uncultured_Mediterranean_phage	1.4e-09	23.5
AMG33425.1\|1338167_1338716_+	SMC-Scp complex subunit ScpB	A0A1B1IVT7	uncultured_Mediterranean_phage	1.6e-10	31.4
AMG33426.1\|1338708_1339446_+	rRNA pseudouridine synthase	NA	NA	NA	NA
AMG33427.1\|1339572_1340298_+	DNA-binding response regulator	W8CYM9	Bacillus_phage	1.1e-46	42.6
AMG34544.1\|1340281_1342045_+	HAMP domain-containing protein	A0A1V0SGX0	Hokovirus	1.7e-21	23.8
AMG33428.1\|1342472_1343018_+	ECF transporter S component	NA	NA	NA	NA
AMG33429.1\|1343173_1343422_-	ferredoxin	A0A127AYY7	Bacillus_phage	4.9e-15	48.0
AMG33430.1\|1343531_1344491_+	hypothetical protein	NA	NA	NA	NA
AMG33431.1\|1344483_1345863_+	ATP-dependent DNA helicase RecQ	M1PGQ0	Moumouvirus	5.4e-55	32.4

DBSCAN-SWA_6

1527572 : 1574296

Staphylococcus_phage(48.15%)

capsid,holin,portal,terminase,tail,integrase,protease

attL 1529437:1529496|attR 1574352:1574487

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AMG33597.1\|1527572_1528439_-	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	8.5e-22	28.7
AMG33598.1\|1528674_1528872_-	hypothetical protein	NA	NA	NA	NA
1529437:1529496	attL	NA	NA	NA	NA
AMG33599.1\|1529753_1530314_-	hypothetical protein	NA	NA	NA	NA
AMG33600.1\|1530369_1530780_-	YolD-like family protein	U3PG23	Staphylococcus_phage	1.0e-70	94.1
AMG33601.1\|1530789_1530981_-	hypothetical protein	A0A2H4JGI3	uncultured_Caudovirales_phage	2.2e-31	100.0
AMG33602.1\|1531113_1531521_-	hypothetical protein	A0A1W6JPD2	Staphylococcus_phage	4.0e-14	32.8
AMG33603.1\|1531539_1532085_-	hypothetical protein	A0A1W6JPJ2	Staphylococcus_phage	4.8e-31	42.2
AMG33604.1\|1532084_1532333_-	type II toxin-antitoxin system HicA family toxin	NA	NA	NA	NA
AMG33605.2\|1532568_1533543_-	hypothetical protein	A0A2H4J7F3	uncultured_Caudovirales_phage	3.3e-184	96.6
AMG34548.1\|1533862_1534513_-	hypothetical protein	A0A1W6JQ05	Staphylococcus_phage	5.7e-55	53.6
AMG33606.1\|1534538_1534874_-	CHAP domain-containing protein	A0A2H4J7F3	uncultured_Caudovirales_phage	6.8e-52	86.4
AMG33607.1\|1534884_1535172_-\|holin	phage holin	A0A2H4JAT1	uncultured_Caudovirales_phage	2.8e-46	100.0
AMG33608.1\|1535214_1535610_-	hypothetical protein	A0A2H4JB27	uncultured_Caudovirales_phage	5.0e-62	98.5
AMG33609.1\|1535593_1536034_-	hypothetical protein	A0A2H4JD88	uncultured_Caudovirales_phage	4.0e-76	98.6
AUY63133.1\|1536071_1536236_-	XkdX family protein	A0A2H4J5I2	uncultured_Caudovirales_phage	8.2e-19	87.0
AMG33610.1\|1536210_1536633_-	hypothetical protein	A0A2H4J5I5	uncultured_Caudovirales_phage	2.0e-53	99.0
AMG33611.1\|1536644_1538213_-	DUF2479 domain-containing protein	A0A2H4J953	uncultured_Caudovirales_phage	3.0e-259	99.4
AMG33612.1\|1538214_1539903_-	hypothetical protein	A0A2H4J5J0	uncultured_Caudovirales_phage	0.0e+00	99.5
AMG33613.1\|1539889_1540219_-	hypothetical protein	A0A2H4JCK2	uncultured_Caudovirales_phage	9.1e-09	66.7
AMG33614.1\|1540211_1541801_-	peptidase	A0A2H4J5K5	uncultured_Caudovirales_phage	5.9e-279	89.6
AMG33615.1\|1541810_1542647_-\|tail	phage tail family protein	A0A2H4J7E0	uncultured_Caudovirales_phage	1.6e-97	68.8
AMG33616.1\|1542649_1548667_-\|tail	phage tail tape measure protein	A0A0K1LKC4	Staphylococcus_phage	2.4e-192	59.9
AMG33617.1\|1548884_1549214_-	hypothetical protein	NA	NA	NA	NA
AMG33618.1\|1549277_1549745_-\|tail	phage tail protein	A0A1D6Z291	Staphylococcus_phage	1.2e-35	58.7
AMG33619.1\|1549839_1550427_-\|tail	phage tail protein	A0A2I6PEP6	Staphylococcus_phage	1.0e-71	65.5
AMG33620.1\|1550466_1550862_-	hypothetical protein	A0A2I6PEQ4	Staphylococcus_phage	1.6e-39	61.8
AMG33621.1\|1550858_1551266_-	hypothetical protein	A0A2I6PF54	Staphylococcus_phage	1.0e-38	57.9
AMG33622.1\|1551265_1551628_-	hypothetical protein	M9QX19	Staphylococcus_phage	1.3e-21	39.1
AMG33623.1\|1551602_1551899_-	hypothetical protein	A8ATA0	Listeria_phage	5.8e-15	41.1
AMG33624.1\|1551972_1553097_-\|capsid	phage major capsid protein	A0A1W6JPL4	Staphylococcus_phage	1.2e-166	79.0
AUY63144.1\|1553123_1553861_-\|protease	Clp protease ClpP	C8CH20	Staphylococcus_phage	8.4e-63	51.4
AMG33625.1\|1553860_1555048_-\|portal	phage portal protein	A0A2I6PDI1	Staphylococcus_phage	4.2e-112	51.8
AMG33626.1\|1555062_1556724_-\|terminase	terminase large subunit	A0A075M4D3	Staphylococcus_phage	1.1e-251	74.3
AMG33627.1\|1556720_1557023_-\|terminase	terminase	Q4ZD78	Staphylococcus_phage	5.7e-18	53.4
AMG33628.1\|1557176_1557515_-	HNH endonuclease	D2XR61	Bacillus_phage	3.1e-28	59.1
AMG33629.1\|1557844_1558243_-	DNA-binding response regulator	A0A1W6JQ60	Staphylococcus_phage	1.7e-46	71.0
AMG33630.1\|1558257_1559616_-	ATP-dependent helicase	Q4ZD24	Staphylococcus_phage	1.2e-219	80.3
AMG33631.1\|1559605_1559896_-	VRR-NUC domain-containing protein	A0A2I6PDQ7	Staphylococcus_phage	2.4e-37	82.2
AMG33632.1\|1560256_1562716_-	hypothetical protein	Q4ZCN2	Staphylococcus_virus	0.0e+00	80.7
AUY63134.1\|1562950_1563088_-	transcriptional regulator	U3PG58	Staphylococcus_phage	1.4e-11	86.0
AMG33633.1\|1563084_1563306_-	DUF1381 domain-containing protein	A0A2H4JI91	uncultured_Caudovirales_phage	1.2e-12	92.7
AMG33634.1\|1563342_1563873_-	dUTP pyrophosphatase	A0A2H4JCC3	uncultured_Caudovirales_phage	8.4e-89	95.5
AMG33635.1\|1563865_1564081_-	hypothetical protein	A0A2H4JB57	uncultured_Caudovirales_phage	5.2e-13	82.2
AMG33636.1\|1564082_1564373_-	hypothetical protein	A0A2H4J5L2	uncultured_Caudovirales_phage	9.1e-21	60.7
AMG33637.1\|1564478_1564886_-	hypothetical protein	A0A0D4DCI8	Staphylococcus_phage	7.3e-08	32.3
AMG33638.1\|1564869_1565079_-	hypothetical protein	U3PE03	Staphylococcus_phage	8.8e-26	88.1
AMG33639.1\|1565075_1565381_-	hypothetical protein	A0A2H4JAZ4	uncultured_Caudovirales_phage	6.4e-49	98.0
AMG33640.2\|1565381_1565870_-	DUF3310 domain-containing protein	A0A2H4J984	uncultured_Caudovirales_phage	2.9e-59	69.0
AMG33641.1\|1565944_1566322_-	hypothetical protein	A0A2H4J2U6	uncultured_Caudovirales_phage	1.4e-61	96.8
AMG33642.1\|1566335_1566539_-	hypothetical protein	A0A2H4JC77	uncultured_Caudovirales_phage	2.0e-27	95.5
AMG34549.1\|1566548_1568489_-	DNA polymerase	M9QT72	Staphylococcus_phage	3.0e-309	80.2
AMG33643.1\|1568560_1569112_-	DUF2815 domain-containing protein	M9QRS1	Staphylococcus_phage	1.3e-79	84.1
AMG33644.1\|1569135_1570302_-	DUF2800 domain-containing protein	Q4ZD47	Staphylococcus_phage	1.5e-178	79.1
AMG33645.1\|1570298_1570676_-	hypothetical protein	A0A2I6PEM7	Staphylococcus_phage	1.2e-12	63.2
AMG33646.1\|1570742_1570925_-	hypothetical protein	NA	NA	NA	NA
AMG33647.1\|1570935_1571208_-	hypothetical protein	NA	NA	NA	NA
AMG33648.1\|1571228_1571453_-	XRE family transcriptional regulator	Q9G0C3	Lactococcus_phage	1.2e-07	43.5
AMG33649.1\|1571633_1571987_+	XRE family transcriptional regulator	D7RWF2	Brochothrix_phage	1.8e-07	37.9
AMG33650.1\|1572000_1572495_+	hypothetical protein	A0A2H4JD66	uncultured_Caudovirales_phage	1.5e-55	64.6
AMG33651.1\|1572584_1573088_+	hypothetical protein	NA	NA	NA	NA
AMG33652.1\|1573165_1574296_+\|integrase	site-specific integrase	A0A1W6JQD3	Staphylococcus_phage	1.0e-35	30.0
1574352:1574487	attR	NA	NA	NA	NA

DBSCAN-SWA_7

1746491 : 1754901

uncultured_Caudovirales_phage(50.0%)

integrase

attL 1751511:1751532|attR 1754915:1754936

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AMG33797.2\|1746491_1748849_-	heavy metal translocating P-type ATPase	E4ZFI9	Streptococcus_phage	6.2e-160	44.9
AMG33798.1\|1749041_1749356_-	ArsR family transcriptional regulator	NA	NA	NA	NA
AMG34550.2\|1749496_1750405_-	DDE domain-containing protein	A0A0C5AEA5	Paenibacillus_phage	9.4e-48	43.9
AMG33799.1\|1750365_1751049_-	hypothetical protein	NA	NA	NA	NA
1751511:1751532	attL	NA	NA	NA	NA
AMG33800.1\|1751779_1751971_-	hypothetical protein	A0A2H4J314	uncultured_Caudovirales_phage	1.2e-10	58.9
AMG33801.1\|1752284_1752695_-	YolD-like family protein	A0A2H4JEH6	uncultured_Caudovirales_phage	2.2e-68	90.4
AMG33802.1\|1752704_1752896_-	hypothetical protein	A0A2H4JGI3	uncultured_Caudovirales_phage	7.0e-30	95.2
AMG33803.1\|1752991_1753240_-	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA
AMG33804.1\|1753531_1753783_-	hypothetical protein	NA	NA	NA	NA
AMG33805.1\|1753857_1754901_+\|integrase	site-specific integrase	A0A1W6JQE7	Staphylococcus_phage	1.2e-118	62.8
1754915:1754936	attR	NA	NA	NA	NA

DBSCAN-SWA_8

1833679 : 1842154

Synechococcus_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AMG33874.1\|1833679_1834246_-	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	9.7e-27	38.2
AMG33875.1\|1834248_1835277_-	phosphoribosylformylglycinamidine cyclo-ligase	Q58MH8	Prochlorococcus_phage	4.6e-67	44.5
AMG33876.1\|1835269_1836757_-	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	1.0e-43	31.5
AMG33877.1\|1836735_1838925_-	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	1.4e-137	39.6
AMG33878.1\|1838917_1839589_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA
AMG33879.1\|1839588_1839849_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA
AMG33880.1\|1839851_1840553_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A1D7SE76	Cyanophage	6.8e-46	42.5
AMG33881.1\|1840557_1841685_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA
AMG33882.1\|1841671_1842154_-	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	2.6e-20	44.0

DBSCAN-SWA_9

2080119 : 2098855

uncultured_Caudovirales_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AMG34105.1\|2080119_2081088_-	iron ABC transporter permease	A0A2H4IY97	uncultured_Caudovirales_phage	2.6e-136	78.3
AMG34106.1\|2081501_2082470_-	class 1b ribonucleoside-diphosphate reductase subunit beta	A0A2H4J4P3	uncultured_Caudovirales_phage	2.2e-175	94.4
AMG34107.1\|2082593_2084699_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	A0A2H4J2N6	uncultured_Caudovirales_phage	0.0e+00	90.0
AMG34108.1\|2084661_2085060_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	A0A2H4J545	uncultured_Caudovirales_phage	8.6e-54	76.5
AMG34109.1\|2085786_2086674_+	EamA/RhaT family transporter	NA	NA	NA	NA
AMG34110.1\|2086687_2087188_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	E7DN65	Pneumococcus_phage	2.0e-52	72.3
AMG34111.1\|2087370_2088885_+	peptide MFS transporter	A0A0P0IY73	Acinetobacter_phage	3.3e-69	35.8
AMG34112.1\|2089255_2090761_+	peptide MFS transporter	A0A0P0IY73	Acinetobacter_phage	1.7e-65	32.2
AMG34113.2\|2091232_2092180_+	lipid kinase	A0A1V0SBJ0	Catovirus	1.5e-11	23.6
AMG34114.1\|2092350_2092899_-	5'(3')-deoxyribonucleotidase	A0A0A0PKY7	Bacillus_phage	2.0e-29	39.0
AMG34115.1\|2093076_2094132_-	histidinol-phosphate transaminase	A0A1X6WGT4	Pacmanvirus	2.3e-21	27.2
AMG34116.1\|2094290_2095808_-	glycine/betaine ABC transporter permease	NA	NA	NA	NA
AMG34117.1\|2095804_2096767_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	4.8e-26	32.5
AMG34118.1\|2097076_2098855_-	DNA helicase RecQ	K7YHB4	Megavirus	2.2e-77	36.4

DBSCAN-SWA_10

2107158 : 2114708

Pandoravirus(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AMG34125.1\|2107158_2108301_-	aminodeoxychorismate synthase, component I	S4VNU7	Pandoravirus	5.4e-24	36.7
AMG34126.1\|2108284_2108878_-	type 1 glutamine amidotransferase	A0A0P0IKJ1	Acinetobacter_phage	1.9e-36	41.5
AMG34127.1\|2109133_2109805_+	7-cyano-7-deazaguanine synthase QueC	A0A2H4J8Q7	uncultured_Caudovirales_phage	1.2e-63	54.9
AMG34128.1\|2109806_2110232_+	6-carboxytetrahydropterin synthase QueD	NA	NA	NA	NA
AMG34129.1\|2110224_2110941_+	7-carboxy-7-deazaguanine synthase QueE	A0A1U9WRB6	Streptococcus_virus	2.5e-51	43.4
AMG34130.1\|2111181_2111775_+	hypothetical protein	NA	NA	NA	NA
AMG34131.1\|2111843_2112095_+	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA
AMG34132.1\|2112312_2113374_-	glycosyltransferase	A0A192Y8W7	Salmonella_phage	8.7e-61	42.3
AMG34133.1\|2113868_2114708_-	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	1.2e-52	40.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. CP014058

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 2574

Streptococcus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AMG34568.1\|418_1189_-	DUF536 domain-containing protein	NA	NA	NA	NA
AMG34569.1\|1635_2574_+	replication protein	Q9MCM7	Streptococcus_virus	1.9e-19	47.1

DBSCAN-SWA_2

8891 : 10547

Tupanvirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AMG34574.1\|8891_9905_+	NAD(P)-dependent alcohol dehydrogenase	A0A2K9L7I1	Tupanvirus	1.2e-11	26.5
AMG34575.1\|10232_10547_-	arsenate reductase	A0A2H4PQT9	Staphylococcus_phage	5.2e-46	84.6

DBSCAN-SWA_3

14386 : 14938

Salisaeta_icosahedral_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AMG34577.1\|14386_14938_+	recombinase family protein	I1ZBD6	Salisaeta_icosahedral_phage	2.9e-31	41.0

DBSCAN-SWA_4

20148 : 22266

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUY63147.1\|20148_22266_-	CHAP domain-containing protein	A0A0U1X189	Staphylococcus_phage	1.9e-11	46.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP014057

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. CP014058

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection