CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
CP027040	Klebsiella pneumoniae strain 16_GR_13 plasmid unnamed, complete sequence	0 crisprs	NA	0	0
CP027039	Klebsiella pneumoniae strain 16_GR_13 plasmid IncLM, complete sequence	0 crisprs	NA	0	0
CP027038	Klebsiella pneumoniae strain 16_GR_13 plasmid IncAC2, complete sequence	0 crisprs	DEDDh	0	10
CP027037	Klebsiella pneumoniae strain 16_GR_13 plasmid IncFIB IncFII, complete sequence	0 crisprs	cas3,csa3,RT	0	1
CP027041	Klebsiella pneumoniae strain 16_GR_13 plasmid ColRNAI, complete sequence	0 crisprs	NA	0	0
CP027036	Klebsiella pneumoniae strain 16_GR_13 chromosome, complete genome	2 crisprs	cas3,DEDDh,WYL,RT,DinG,csa3	1	7

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

37956 : 100759

Escherichia_phage(52.38%)

transposase,bacteriocin,protease,integrase

attL 58805:58864|attR 77617:78438

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZI07213.1\|37956_38235_+\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
AZI07353.1\|38503_39055_+	phospholipase D family protein	A0A1B2LRT6	Wolbachia_phage	1.1e-19	35.2
AZI07214.1\|39375_39654_+	replication protein	NA	NA	NA	NA
AZI07354.1\|39870_39948_+	RepA leader peptide Tap	NA	NA	NA	NA
AZI07215.1\|39940_40798_+	incFII family plasmid replication initiator RepA	NA	NA	NA	NA
AZI07216.1\|41102_41291_-	hypothetical protein	NA	NA	NA	NA
AZI07355.1\|41434_41623_-	hypothetical protein	NA	NA	NA	NA
AZI07217.1\|42244_44440_-	DEAD/DEAH box helicase	NA	NA	NA	NA
AZI07218.1\|44436_45753_-	ATP-binding protein	NA	NA	NA	NA
AZI07219.1\|45756_48066_-	ATPase	NA	NA	NA	NA
AZI07220.1\|48710_49634_-\|transposase	IS5/IS1182 family transposase	Q9MCT5	Escherichia_phage	7.1e-176	99.0
AZI07221.1\|52441_53146_+\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AZI07356.1\|53289_53844_+	fluoroquinolone-acetylating aminoglycoside 6'-N-acetyltransferase AAC(6')-Ib-cr5	NA	NA	NA	NA
AZI07357.1\|53974_54805_+	oxacillin-hydrolyzing class D beta-lactamase OXA-1	NA	NA	NA	NA
AZI07222.1\|55436_56141_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AZI07223.1\|56247_57108_+	aminoglycoside N-acetyltransferase AAC(3)-IIa	NA	NA	NA	NA
AZI07224.1\|57120_57663_+	tunicamycin resistance protein	NA	NA	NA	NA
58805:58864	attL	NA	NA	NA	NA
AZI07225.1\|58856_59561_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AZI07226.1\|61882_62215_+	cupin fold metalloprotein, WbuC family	NA	NA	NA	NA
AZI07227.1\|62261_63137_-	class A extended-spectrum beta-lactamase CTX-M-15	A0A1B0VBP7	Salmonella_phage	1.1e-125	82.4
AZI07228.1\|63446_64151_-\|transposase	IS6 family transposase IS15DI	A0A077SL39	Escherichia_phage	1.2e-138	99.6
AZI07229.1\|66115_66820_+\|transposase	IS6 family transposase IS15DI	A0A077SL39	Escherichia_phage	1.2e-138	99.6
AZI07230.1\|66765_67194_-	hypothetical protein	NA	NA	NA	NA
AZI07231.1\|67132_68146_-\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	1.0e-71	45.5
AZI07232.1\|68290_68788_+	trimethoprim-resistant dihydrofolate reductase DfrA12	A0A0A0PL85	Bacillus_phage	7.5e-23	40.9
AZI07233.1\|69195_69987_+	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA2	NA	NA	NA	NA
AZI07234.1\|70150_70498_+	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
AZI07235.1\|70491_71331_+	sulfonamide-resistant dihydropteroate synthase Sul1	A0A0B5J4J5	Pandoravirus	5.0e-11	27.2
AZI07236.1\|71260_71440_-	hypothetical protein	NA	NA	NA	NA
AZI07237.1\|71458_71662_+	hypothetical protein	NA	NA	NA	NA
AZI07238.1\|71817_73023_+	chromate transporter	NA	NA	NA	NA
AZI07239.1\|73033_73339_+	PadR family transcriptional regulator	NA	NA	NA	NA
AZI07240.1\|73354_73537_-	resolvase	NA	NA	NA	NA
AZI07241.1\|73565_74330_+\|transposase	IS6 family transposase IS6100	A0A077SL39	Escherichia_phage	4.3e-86	65.7
AZI07242.1\|74520_74877_-	hypothetical protein	NA	NA	NA	NA
AZI07243.1\|74822_75407_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AZI07244.1\|75406_76645_-	MFS transporter	NA	NA	NA	NA
AZI07245.1\|76641_77547_-	Mph(A) family macrolide 2'-phosphotransferase	NA	NA	NA	NA
AZI07246.1\|77668_78373_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AZI07247.1\|78523_79339_+	aminoglycoside O-phosphotransferase APH(3')-Ia	A0A193DTG4	Autographa_californica_nuclear_polyhedrosis_virus	6.1e-163	100.0
77617:78438	attR	NA	NA	NA	NA
AZI07248.1\|79528_80197_-\|transposase	IS6 family transposase	A0A077SL39	Escherichia_phage	1.9e-130	99.5
AZI07249.1\|81500_82205_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.2e-138	99.6
AZI07250.1\|83060_83888_+	phosphonate ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.6e-20	37.6
AZI07251.1\|83884_84748_+	phosphate/phosphite/phosphonate ABC transporter substrate-binding protein	NA	NA	NA	NA
AZI07358.1\|84756_85584_+	phosphonate ABC transporter, permease protein PhnE	NA	NA	NA	NA
AZI07252.1\|85592_86603_+	phosphonate dehydrogenase	A0A1V0SBV6	Catovirus	1.4e-15	25.1
AZI07253.1\|86596_87466_+	LysR family transcriptional regulator	NA	NA	NA	NA
AZI07360.1\|88171_88498_-	hypothetical protein	NA	NA	NA	NA
AZI07359.1\|88549_88636_+	ABC transporter	NA	NA	NA	NA
AZI07254.1\|88674_89655_-\|transposase	IS5-like element ISKpn26 family transposase	Q38213	Escherichia_phage	8.9e-185	99.1
AZI07361.1\|91641_91923_+	DNA-binding protein	A0A1B1IUF9	uncultured_Mediterranean_phage	5.2e-05	38.2
AZI07255.1\|91957_92527_+	Hsp20/alpha crystallin family protein	NA	NA	NA	NA
AZI07256.1\|92641_95437_+\|protease	ATP-dependent Clp protease ATP-binding subunit	K4FB40	Cronobacter_phage	5.2e-129	41.0
AZI07257.1\|95436_95634_+	hypothetical protein	NA	NA	NA	NA
AZI07258.1\|95871_96621_+	diguanylate cyclase	NA	NA	NA	NA
AZI07259.1\|96607_97570_+\|protease	Zn-dependent protease	NA	NA	NA	NA
AZI07362.1\|99412_100759_-\|transposase	ISNCY family transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. CP027036

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CRISPR-Cas detection and classification

Crispr_ID: CP027036_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP027036_1

2062495-2062580

Orphan

Consensus_repeat	Method
AATAAAAACCATAAAAACCACAGT	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP027036_1

>merge|CP027036|1|2062495-2062580|CRISPRCasFinder
AATAAAAACCATAAAAACCACAGTCATAAATCAGAGATATATCACTCCCGGGCAGTTCAGCGAATAAAAACCATAAAAACCATAGT

>CP027036|1|1|2062495-2062580|CRISPRCasFinder
AATAAAAACCATAAAAACCACAGT	CATAAATCAGAGATATATCACTCCCGGGCAGTTCAGCG
AATAAAAACCATAAAAACCATAGT

Protein	Signature genes	Signature genes Name	Protein_function
CP027036.1\|AZI03887.1\|2060727_2062353_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|225827
CP027036.1\|AZI03895.1\|2071967_2073470_-\|L-arabinose-isomerase	unknown	unknown	gnl\|CDD\|179503
CP027036.1\|AZI03894.1\|2071134_2071830_-\|L-ribulose-5-phosphate-4-epimerase	unknown	unknown	gnl\|CDD\|236181
CP027036.1\|AZI03879.1\|2052200_2053049_-\|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)	unknown	unknown	gnl\|CDD\|273208
CP027036.1\|AZI03878.1\|2052044_2052248_+\|hypothetical-protein	unknown	unknown	unknown
CP027036.1\|AZI03883.1\|2055246_2056533_-\|peptidylprolyl-isomerase-SurA	unknown	unknown	gnl\|CDD\|236758
CP027036.1\|AZI03881.1\|2053433_2054255_-\|ribosomal-RNA-small-subunit-methyltransferase-A	unknown	unknown	gnl\|CDD\|234708
CP027036.1\|AZI03884.1\|2056587_2058936_-\|LPS-assembly-protein-LptD	unknown	unknown	gnl\|CDD\|235158
CP027036.1\|AZI03889.1\|2064070_2064259_-\|hypothetical-protein	unknown	unknown	unknown
CP027036.1\|AZI03891.1\|2064835_2065495_-\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	unknown	unknown	gnl\|CDD\|236659
CP027036.1\|AZI03897.1\|2075527_2076373_+\|arabinose-operon-transcriptional-regulator-AraC	unknown	unknown	gnl\|CDD\|236717
CP027036.1\|AZI03892.1\|2065507_2068414_-\|RNA-polymerase-associated-protein-RapA	unknown	unknown	gnl\|CDD\|235319
CP027036.1\|AZI03880.1\|2053053_2053431_-\|Co2+/Mg2+-efflux-protein-ApaG	unknown	unknown	gnl\|CDD\|180098
CP027036.1\|AZI03890.1\|2064221_2064761_+\|citrate-lyase-holo-[acyl-carrier-protein]-synthase	unknown	unknown	gnl\|CDD\|163145
CP027036.1\|AZI03888.1\|2062677_2064042_+\|malate-permease	unknown	unknown	gnl\|CDD\|377030
CP027036.1\|AZI03886.1\|2060039_2060738_-\|response-regulator	unknown	unknown	gnl\|CDD\|226931
CP027036.1\|AZI03893.1\|2068601_2070959_-\|DNA-polymerase-II	unknown	unknown	gnl\|CDD\|235595
CP027036.1\|AZI03896.1\|2073480_2075190_-\|ribulokinase	unknown	unknown	gnl\|CDD\|235221
CP027036.1\|AZI03885.1\|2059179_2060007_+\|co-chaperone-DjlA	unknown	unknown	gnl\|CDD\|236512
CP027036.1\|AZI03882.1\|2054251_2055241_-\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	unknown	unknown	gnl\|CDD\|234696

Protein	Function_ID	Function_description	E-value
CP027036.1\|AZI03887.1\|2060727_2062353_-\|sensor-histidine-kinase	gnl\|CDD\|225827	COG3290, CitA, Signal transduction histidine kinase regulating citrate/malate metabolism [Signal transduction mechanisms].	6.55037e-173
CP027036.1\|AZI03895.1\|2071967_2073470_-\|L-arabinose-isomerase	gnl\|CDD\|179503	PRK02929, PRK02929, L-arabinose isomerase; Provisional.	0
CP027036.1\|AZI03894.1\|2071134_2071830_-\|L-ribulose-5-phosphate-4-epimerase	gnl\|CDD\|236181	PRK08193, araD, L-ribulose-5-phosphate 4-epimerase AraD.	0
CP027036.1\|AZI03879.1\|2052200_2053049_-\|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)	gnl\|CDD\|273208	TIGR00668, Bis5'-nucleosyl-tetraphosphatase_symmetrical, bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Diadenosine 5',5"'-P1,P4-tetraphosphate (Ap4A) is a regulatory metabolite of stress conditions. It is hydrolyzed to two ADP by this enzyme. Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase. [Cellular processes, Adaptations to atypical conditions].	0
CP027036.1\|AZI03880.1\|2053053_2053431_-\|Co2+/Mg2+-efflux-protein-ApaG	gnl\|CDD\|180098	PRK05461, apaG, CO2+/MG2+ efflux protein ApaG; Reviewed.	7.84855e-74
CP027036.1\|AZI03883.1\|2055246_2056533_-\|peptidylprolyl-isomerase-SurA	gnl\|CDD\|236758	PRK10770, PRK10770, peptidyl-prolyl cis-trans isomerase SurA; Provisional.	0
CP027036.1\|AZI03881.1\|2053433_2054255_-\|ribosomal-RNA-small-subunit-methyltransferase-A	gnl\|CDD\|234708	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA.	3.65731e-147
CP027036.1\|AZI03884.1\|2056587_2058936_-\|LPS-assembly-protein-LptD	gnl\|CDD\|235158	PRK03761, PRK03761, LPS assembly outer membrane complex protein LptD; Provisional.	0
CP027036.1\|AZI03891.1\|2064835_2065495_-\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	gnl\|CDD\|236659	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA.	2.4454e-161
CP027036.1\|AZI03897.1\|2075527_2076373_+\|arabinose-operon-transcriptional-regulator-AraC	gnl\|CDD\|236717	PRK10572, PRK10572, arabinose operon transcriptional regulator AraC.	0
CP027036.1\|AZI03892.1\|2065507_2068414_-\|RNA-polymerase-associated-protein-RapA	gnl\|CDD\|235319	PRK04914, PRK04914, RNA polymerase-associated protein RapA.	0
CP027036.1\|AZI03890.1\|2064221_2064761_+\|citrate-lyase-holo-[acyl-carrier-protein]-synthase	gnl\|CDD\|163145	TIGR03124, citrate_citX, holo-ACP synthase CitX. Members of this protein family are the CitX protein, or CitX domain of the CitXG bifunctional protein, of the citrate lyase system. CitX transfers the prosthetic group 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA to the citrate lyase gamma chain, an acyl carrier protein. This enzyme may be designated holo-ACP synthase, holo-citrate lyase synthase, or apo-citrate lyase phosphoribosyl-dephospho-CoA transferase. In a few genera, including Haemophilus, this protein occurs as a fusion protein with CitG (2.7.8.25), an enzyme involved in prosthetic group biosynthesis. This CitX family is easily separated from the holo-ACP synthases of other enzyme systems. [Energy metabolism, Fermentation, Protein fate, Protein modification and repair].	5.54697e-86
CP027036.1\|AZI03888.1\|2062677_2064042_+\|malate-permease	gnl\|CDD\|377030	pfam03390, 2HCT, 2-hydroxycarboxylate transporter family. The 2-hydroxycarboxylate transporter family is a family of secondary transporters found exclusively in the bacterial kingdom. They function in the metabolism of the di- and tricarboxylates malate and citrate, mostly in fermentative pathways involving decarboxylation of malate or oxaloacetate.	4.87969e-169
CP027036.1\|AZI03886.1\|2060039_2060738_-\|response-regulator	gnl\|CDD\|226931	COG4565, CitB, Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms].	5.03078e-66
CP027036.1\|AZI03893.1\|2068601_2070959_-\|DNA-polymerase-II	gnl\|CDD\|235595	PRK05762, PRK05762, DNA polymerase II; Reviewed.	0
CP027036.1\|AZI03896.1\|2073480_2075190_-\|ribulokinase	gnl\|CDD\|235221	PRK04123, PRK04123, ribulokinase; Provisional.	0
CP027036.1\|AZI03885.1\|2059179_2060007_+\|co-chaperone-DjlA	gnl\|CDD\|236512	PRK09430, djlA, co-chaperone DjlA.	2.63694e-164
CP027036.1\|AZI03882.1\|2054251_2055241_-\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	gnl\|CDD\|234696	PRK00232, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed.	0

>CP027036.1|AZI03887.1|2060727_2062353_-|sensor-histidine-kinase
MKLSFQYKLFISLVAFFSVLFIALGIYYYFDASRQLYQEMSARAKIQAEEIALMPNLRQQVSRHDPQAIQAFMQQIAAHSDASFIVIGDRQGVHLFHSVHPEWVGTRLVGGDNQAVLEGKSITTIRKGGLGVSLRSKTPIVDDAGRVIGIVSVGYLTSYLDSITLTKVINIFIAAVLLLIALFIFSWYFTRSIKKQIFSLEPREIGLLVRQQKAMMESIFEGVIVIDRQRRIEVINHAARSLLGLSQPARQLRGQSIDSVISPQPFFASGDMLERDTHDELCRFNQLTVLASRVRIMLENTLQGWVITFRDRNEINALTAQLSQVKRYVDNLRIMRHEQLNRMTTLSGLLHMGHYDEAIRYIQAQSEHAQELLDFISSHFHSPTLCGLLLGKATRAREKGVALSFDPACRIDRPLPSLMESELISIIGNLLDNAIEATQRAELPHEPVEVLIQLNARELIIEVADRGVGIRPDIRERIFERGVTTKTRGDHGIGLYLIEHYVTQAGGTIEVADNAPRGTIFTLFIPADAHACPQPEAHDAS
>CP027036.1|AZI03886.1|2060039_2060738_-|response-regulator
MHHDLVDVLIIEDESELARLHAELVQKHPRLRLAGMAASLAQARQLLHATPPQLVLLDNYLPDGKGVTLMTDPALATSQCSVIFITAASDMETCSQAIRNGAFDYILKPVSWKRLSQSLERFIQFYDQQREWKIVDQQNVDSLYQLQAKNYRVDSGSKGIEEKTLALVQGLFSDREAHCFSVDEVVSAAGLSKTTARRYLEHGVETGFLEVEMLYGKIGHPRRLYRRAKVKS
>CP027036.1|AZI03885.1|2059179_2060007_+|co-chaperone-DjlA
MQYLGKVIGVAVALLMGGGFWGVVLGFLVGHMFDRARSRRLNLFANQQERQSLFFSTTFEVMGHLTKSKGRVTEADIHVANVLMDRMNLHGASRTAAQQAFRDGKADNYPLREKMRQLRSVCFGRFDLIRMFLEIQLQAAFADGELHPNEREVLFVIADELGISRAQFDQFLRMMQGGAQFGGGSQQRSYGQHGGNAGWQQAQRGPTLEDACNVLGVKPTDDAATVKRAYRKLMNEHHPDKLVAKGLPPEMMEMAKQKAQEIQKAWELIKEQRGF
>CP027036.1|AZI03884.1|2056587_2058936_-|LPS-assembly-protein-LptD
MKKRIPSLLATMIASALYSQQGLAADLATQCMLGVPSYDRPLVEGRPGDLPVTINADHAKGNYPDNAVFTGNVDINQGNSRLRADEVQLHQQQAAGQAQPVRTVDALGNVHYDDNQVILKGPKAWSNLNTKDTNVWQGDYQMVGRQGRGTADLMKQRGENRYTILENGSFTSCLPGSDTWSVVGSEVIHDREEQVAEIWNARFKLGSVPIFYSPYLQLPVGDKRRSGFLIPNAKYSTKNGVEFSLPYYWNIAPNFDATITPHYMNKRGGVMWENEFRYLTQLGSGLTEFDYLPSDKVYEDDHSSDSNSRRWLFYWNHSGVIDQVWRLNADYTKVSDPDYFNDFSSKYGSSTDGYATQKFSAGYVNQNFDATVSTKQFQVFDRESSNSYSAEPQLDVNYYQNDVGPFDTHLYGQVAHFVNSNNNMPEATRVHFEPTINLPLSNGWGSLNTEAKLLATHYQQSNLDKYNAANGTDYKESVSRVMPQFKVDGKMVFERDLQEGFTQTLEPRVQYLYVPYRDQSEIGNYDSTLLQSDYTGLFRDRTYSGLDRIASANQVTTGLTSRVYDAAAVERFNISVGQIYYFTESRTGDDNINWENNDTTGSLVWAGDTYWRIADEWGLRGGIQYDTRLDNVATGNGTIEYRRDENRLVQLNYRYASPEYIQATLPSYSTAAQYKQGISQVGMTASWPIVDRWSVVGAYYYDTNTRKAANQMLGVQYNSCCYAIRLGYERKVNGWNSNDNGGESKYDNTFGINIELRGLSSNYGLGTQQMLRSNILPYQSSL
>CP027036.1|AZI03883.1|2055246_2056533_-|peptidylprolyl-isomerase-SurA
MKNWKTLLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAGQAGQQLPDDATLRHQILERLIMDQIVLQMGQKMGVKISDDQLDQAIANIAKQNNMTLDQMRSRLAYEGINYNTYRNQIRKEMLISEVRNNEVRRRITVLPQEVEALAKQIGDQNDASTELNLSHILIPLPENPTSDEVAAAQEQANSIVEQARNGANFGKLAITYSADQQALKGGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFHILKVNDLRGGTQNISVTEVHARHILLKPSPIMNDAQAQAKLEQIAAEIKSGKITFAQAAKTYSEDPGSANQGGDLGWATPDIFDPAFRDALMRLNKGQTSGPVHSSFGWHLIELLDSRQVDRTDAAQKDRAYRMLMNRKFSEEAATWMQEQRASAYVKILSN
>CP027036.1|AZI03882.1|2054251_2055241_-|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA
MPETRKVVITPGEPAGIGPDLVVQLAQRDWPVELVICADGALLTDRAKRLGLPLSLLPYDPAQPPVPQRAGTLTLLNVPLNVPAEPGVLNVQNGAYVVETLARACDGCLSGEFAALVTGPVHKGNINDAGIAFTGHTEFFEERAKASKVVMMLATEELRVALVTTHLPLKAISEAITPELLREIITILDHDLRTKFGIAQPHVLVCGLNPHAGEGGHMGTEEIDTIIPVLEEMRAKGMNLSGPLPADTLFQPKYLDHADAVLAMYHDQGLPVLKYQGFGRGVNITLGLPFIRTSVDHGTALELAGQGKADVGSFITALNLAIKMIVNTQ
>CP027036.1|AZI03881.1|2053433_2054255_-|ribosomal-RNA-small-subunit-methyltransferase-A
MNNRVHQGHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALTEPVGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTMNFGELAEKMGQPLRVFGNLPYNISTPLMFHLFSYTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYCQVIPVLEVPPSAFTPPPKVDSAVVRLVPHSTMPYPVKEIRVLSRITTEAFNQRRKTIRNSLGNLFSVEVLTELGIDPAMRAENISVAQYCLMANWLSDNLPTKES
>CP027036.1|AZI03880.1|2053053_2053431_-|Co2+/Mg2+-efflux-protein-ApaG
MIHSPRVCVQVQSVYIESQSSPEEERYVFAYTVTIRNLGRSQVQLLGRYWLITNGHGRETEVQGEGVVGEQPHIPAGGEYQYTSGAVIETPLGTMQGHYEMIDIDGAPFRIEIPVFRLAVPTLIH
>CP027036.1|AZI03879.1|2052200_2053049_-|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)
MSTYLIGDVHGCYDELIALLAQVEFDPRRDTLWLTGDLVARGPGSLEVLRYVKSLGDSVRLVLGNHDLHLLAVFAGISRNKPKDRLKPLLEAPDADELLNWLRRQPLLQVDEEKKLVMAHAGITPQWDLETAQQCARDVEAVLSSDSYPFFLDAMYGDMPNHWSNELSGLARLRFISNAFTRMRYCFPNGQLDMYSKEAPEDAPAPLKPWFAIPGPVSNAYSIAFGHWASLEGRGTPEGIYALDTGCCWGGELTCLRWEDKQYFTQPSNRQKSLDEGEAVAS
>CP027036.1|AZI03878.1|2052044_2052248_+|hypothetical-protein
MFPVAGFVFFLKRSPGRQIAHKRRSGKALAATRQNDAAGSPDKAQRAAIREESGRDGFAFVEAFLPV
>CP027036.1|AZI03888.1|2062677_2064042_+|malate-permease
MSTTDNAFSATLEPIDTPKTTLKQRWWHIMDNWKVGIVPLPLFLLAGGLIALDCLGGKLPSDIVVMVATLAFFGFACGEFGKRLPVLGKLGAAAICATFIPSALVHYGLLPDVVIESTTKFYKSTNILYLYICCIIVGSIMSMNRTTLIQGFLKIFFPMLCGEVVGMLVGIGVGTLLGMEPFQVFFFIVLPIMAGGVGEGAIPLSMGYAALMHMEQGVALGRVLPMVMLGSLTAIVISGCLNQLGKRFPHLTGEGQLMPNRSHETRSLSESEGVSGKTDVGTLASGALLAVLLYMMGMLGHKLIGLPAPVGMLFLAVLLKLANVVSPRLQEGSQMVYKFFRTAVTYPILFAVGVAITPWQELVNAFTLTNLLVIVSTVSALVATGFLVGKKIGMHPIDVAIVSCCQSGQGGTGDVAILTAGNRMSLMPFAQIATRIGGAINVSLGLLFLSHYLA
>CP027036.1|AZI03889.1|2064070_2064259_-|hypothetical-protein
MLTPAWAGVSTDINSSPTYDKYDSAWTVMMMVAIADRALIVTLNAEHLGYRTQIFSAFCSGK
>CP027036.1|AZI03890.1|2064221_2064761_+|citrate-lyase-holo-[acyl-carrier-protein]-synthase
MSVDTPAQAGVSIDALLAAKEQRAARQADWLAHYQQPVISLTLVTPGAVKDSIRYRNMMGVALQACDQLLWKHRWQTLDRQVLWLPTGPEALWCVAHPASEIKAMCSTLEQSHPLGRLWDIDVICPQNGLVGRQSLGESQRRCLLCDEPAHACARSRRHDTDLVVARVEQMIDAWFARD
>CP027036.1|AZI03891.1|2064835_2065495_-|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA
MAMENYNPPQDPWLVILYQDEHIMVVNKPSGLLSVPGRLEEHKDSVMTRIQRDFPQAESVHRLDMATSGVIVVALNKAAERELKRQFREREPKKQYVARVWGHPQPAEGLVDLPLICDWPNRPKQKVCYETGKAAQTEYEVLEYAEDNTARVRLKPITGRSHQLRVHMLALGHPILGDRFYATPEALAMAPRLLLHAETLTITHPAYGNAMTFRAPIDF
>CP027036.1|AZI03892.1|2065507_2068414_-|RNA-polymerase-associated-protein-RapA
MPFTLGQRWISDTESELGLGTVVALDARMVTLLFPAIGENRLYSRNDSPITRVMFNPGDTITSHEGWQLHVDKVNEENGLLSYTGTRLDTQEANVTLREVLLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKFQSEQYRMPWSGLRGQRTSLIPHQLHIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIVVPETLQHQWLVEMLRRFNLRFSLFDDERYAEAQHDAYNPFETEQLVICSLDFVRRSKQRLEHLCDAEWDLMVVDEAHHLVWSEEAPSREYQAIEQLAERVPGILLLTATPEQLGMESHFARLRLLDPNRFHDFEQFVEEQQNYRPVADAVALLLAGNKLSDSELNTLGDLIGEQDIEPLLQAANSDREDAQAARQELISMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIRLPLPTQYQTAIKVSGIMGARKTAEERARDMLYPEQIYQEFEGDTGTWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASNLVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTVYDSVHDELINYLAAPESIDGFDDLIKSCRQQHDALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTSLIAFSMNLFDIVGINQDDRGENLIVLTPSDHMLVPDFPGLPEDGCTITFERDVALSREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLLELIYVVEAQAPKQLQLNRFLPATPVRMLLDKNGNNLAAQVEFESFNRQLSAVNRHTGSKLVNAVQQDVHAILQQGEAQIAKAAQGLIDAARNEADEKLTAELSRLEALKAVNPNIRDDELAGIESNRQQVMDALAQAGWRLDALRLIVVTHQ
>CP027036.1|AZI03893.1|2068601_2070959_-|DNA-polymerase-II
MTQPRAGFLLTRHWRDTPQGTELSFWLATDDGPLQVTLPPQESVAFIPEAQRAQAERLLQGEKGLRFAPLALKDFHRQPIVGLYCRAHRQLMRLEKMLRDSGVTVYEGDIRPPERYLMERFITAPVWVEGETRGSQLVNARMKPNPDYRPPLKWVSLDIETSRHGELYCIGLEGCGQRVVYMLGPEPETPPDVDFELVFIASRPLLLEKLNAWFAEHDPDVLIGWNVVQFDLRVLQKHAERYRIPLRLGRGNSELEWREHGFKNGVFFAQANGRLIIDGIDALKSAFWNFSSFSLEAVARELLGEGKAIDNPWDRMDEIDRRFHEDKPALAIYNLQDCELVTRIFHKTEIMPFLLERATVNGLPADRHGGSVAAFSHLYFPRMHRLGYVAPNLGDVPPQASPGGYVMDSRPGLYDSVLVLDYKSLYPSIIRTFLIDPVGLIEGLAQPDDQHSIEGFLGARFSRDKHCLPGIVSQIWHGRDEAKRQHNKPLSQALKIIMNAFYGVLGTSACRFFDPRLASSITMRGHAIMRQTKALIEAKGYDVIYGDTDSTFVWLKRPHSEAQAAEIGRELVSHVNAWWAQELSKSQLTSALELEYETHFCRFLMPTIRGADTGSKKRYAGMIQEGDAQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNQPYQDYVRETIARLMNGELDEQLVYRKRLRRPLAEYQRNVPPHVRAARLADEHNLKLGRAQQYQQRGTIKYVWTTSGPEPVDYQQSPLDYDHYLTKQLQPVAEGILPFVNDDFATIVTGQLGLF
>CP027036.1|AZI03894.1|2071134_2071830_-|L-ribulose-5-phosphate-4-epimerase
MLEDLKRQVLEANLALPKHNLVTLTWGNVSAVDREKGVFVIKPSGVDYRVMTADDMVVVSLESGEVVEGNKKPSSDTPTHRLLYQAFPTLGGIVHTHSRHATIWAQAGQSIPATGTTHADYFYGPVPCTRLMTDAEINGDYEWETGNVIVETFRQQGIDPAQMPGVLVHSHGPFAWGKNAEDAVHNAIVLEEIAYMGIFCRQLAPQLPAMQQTLLDKHYLRKHGAKAYYGQ
>CP027036.1|AZI03895.1|2071967_2073470_-|L-arabinose-isomerase
MTIFDNYEVWFVIGSQHLYGPEALRQVTKHAEHVVNSLNAEAKLPCKLVLKPLGTTPDEITHICRDANYDDKCAGLVVWLHTFSPAKMWINGLTILNKPLLQFHTQYNAALPWDSIDMDFMNLNQTAHGGREFGFIGARMRQQHSVVTGHWQDKEAHQRIGGWMRQAVSKQDTRHLKVCRFGDNMREVAVTDGDKVAAQIKFGFSVNTWAVGDLVQVVNSISDGDISALVDEYESSYRLTPAAQVHGEKRQNVLDAARIELGMKRFLEQGGFHAFTTTFEDLHGLKQLPGLAVQRLMQQGYGFAGEGDWKTAALLRIMKVMSTGLQGGTSFMEDYTYHFDNGNDLVLGSHMLEVCPTIATVEKPILDVQPLGIGGKADPARLIFNTQTGPAIVASLIDLGDRFRLLVNTIETVPTPHDLPKLPVANALWKAQPDLRTASEAWIIAGGAHHTVFSHALNLDDMRQFAELHDIELTVIDNDTRLPSFKDALRWNEVYYGSKR
>CP027036.1|AZI03896.1|2073480_2075190_-|ribulokinase
MAIAIGLDFGSDSVRALAVECASGAELATSVEWYPRWREGQYCDGANNRFRHHPRDYIESMEAALKSVLASLSAEQRADVVGIGVDSTGSTPAPVDAEGNVLALREEFADNPNAMFVLWKDHTAVEEAEAITRLCHQPGKEDYSRYIGGIYSSEWFWAKILHVTREDSAVAQAAASWVELCDWVPALLSGTTRPQDLRRGRCSAGHKSLWHESWGGLPPASFFDELDPIINQHLAWPLFTDTWTADVPVGTLSAEWAQRLGLSQSVAISGGAFDCHMGAVGAGAQPNALVKVIGTSTCDILIADKESVGERTVKGICGQVDGSVVPHFIGMEAGQSAFGDIYAWFGRILGWPLEQLAQQQPALREQIKASQKQLLPALTEAWANNPSLEHLPVVLDWFNGRRTPNANQRLKGVITDLNLATDAPALFGGLIAATAFGARAIMECFTEQGIPVNNVMALGGIARKNQVIMQACCDVLNRPLQIVASDQCCALGAAIFAAVAAGVYDDIPAAQQRMASQVETTLQPRPAQAQRFEQLYQRYQQWSVSAEQHYLPSAAKAEKAPQSKAALTH
>CP027036.1|AZI03897.1|2075527_2076373_+|arabinose-operon-transcriptional-regulator-AraC
MAETQNDPLLPGYSFNAHLVTGLTPIEAQGYLDFFIDRPLGMKGYILNLTIRGEGVINNHGEQFVCRPGDMLLFPPGEIHHYGRHPDASEWYHQWVYFRPRAYWHEWLNWPTIFAQTGFFRPDEQWQARFGELFGQIVDAGQGAGRYSELLAINLLEQLLLRRMEAINESLHPPLDNRVREACQYISDHLADSHFDIASVAQHVCLSPSRLSHLFRQQLGVSVLGWREDQRISQAKLLLSTTRMPIATVGRNVGFEDQLYFSRVFKKCTGASPSEFRAGCE

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Crispr_ID: CP027036_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP027036_3

2933548-2933625

Orphan

Consensus_repeat	Method
AAGGCGTCAGCCGCCGCCCGGCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP027036_3

>merge|CP027036|3|2933548-2933625|CRISPRCasFinder
AAGGCGTCAGCCGCCGCCCGGCAAAATAACCGCGCAATAGCACCGTAGGCCGGGCAAGGCGTCAGCCGCCGCCCGGCA

>CP027036|3|3|2933548-2933625|CRISPRCasFinder
AAGGCGTCAGCCGCCGCCCGGCA	AAATAACCGCGCAATAGCACCGTAGGCCGGGC
AAGGCGTCAGCCGCCGCCCGGCA

Protein	Signature genes	Signature genes Name	Protein_function
CP027036.1\|AZI04672.1\|2928306_2929995_+\|urocanate-hydratase	unknown	unknown	gnl\|CDD\|235448
CP027036.1\|AZI04667.1\|2922047_2922971_-\|acyltransferase	unknown	unknown	gnl\|CDD\|225813
CP027036.1\|AZI04670.1\|2926420_2927377_+\|formimidoylglutamase	unknown	unknown	gnl\|CDD\|234974
CP027036.1\|AZI04674.1\|2931616_2932999_+\|amino-acid-permease	unknown	unknown	gnl\|CDD\|182566
CP027036.1\|AZI04671.1\|2927438_2928164_+\|histidine-utilization-repressor	unknown	unknown	gnl\|CDD\|184961
CP027036.1\|AZI04683.1\|2940850_2942872_+\|excinuclease-ABC-subunit-B	unknown	unknown	gnl\|CDD\|235395
CP027036.1\|AZI04675.1\|2933244_2933514_-\|hypothetical-protein	unknown	unknown	unknown
CP027036.1\|AZI04677.1\|2935827_2936868_+\|biotin-synthase	unknown	unknown	gnl\|CDD\|185063
CP027036.1\|AZI04679.1\|2938005_2938761_+\|malonyl-[acyl-carrier-protein]-O-methyltransferase-BioC	unknown	unknown	gnl\|CDD\|182340
CP027036.1\|AZI04668.1\|2923666_2924950_-\|putative-acyl-CoA-thioester-hydrolase	unknown	unknown	gnl\|CDD\|236709
CP027036.1\|AZI04678.1\|2936864_2938022_+\|8-amino-7-oxononanoate-synthase	unknown	unknown	gnl\|CDD\|235655
CP027036.1\|AZI04666.1\|2921524_2922031_+\|hypothetical-protein	unknown	unknown	unknown
CP027036.1\|AZI07071.1\|2940438_2940618_-\|hypothetical-protein	unknown	unknown	unknown
CP027036.1\|AZI04669.1\|2925206_2926424_+\|imidazolonepropionase	unknown	unknown	gnl\|CDD\|236478
CP027036.1\|AZI04673.1\|2929991_2931518_+\|histidine-ammonia-lyase	unknown	unknown	gnl\|CDD\|236484
CP027036.1\|AZI04682.1\|2940226_2940439_-\|dTDP-4-dehydrorhamnose-reductase	unknown	unknown	unknown
CP027036.1\|AZI04676.1\|2933777_2934254_-\|kinase-inhibitor	unknown	unknown	gnl\|CDD\|182339
CP027036.1\|AZI04681.1\|2939417_2940140_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|223487
CP027036.1\|AZI04680.1\|2938753_2939476_+\|ATP-dependent-dethiobiotin-synthetase-BioD	unknown	unknown	gnl\|CDD\|234625
CP027036.1\|AZI07070.1\|2934324_2935614_-\|adenosylmethionine--8-amino-7-oxononanoate-transaminase	unknown	unknown	gnl\|CDD\|181189

Protein	Function_ID	Function_description	E-value
CP027036.1\|AZI04672.1\|2928306_2929995_+\|urocanate-hydratase	gnl\|CDD\|235448	PRK05414, PRK05414, urocanate hydratase; Provisional.	0
CP027036.1\|AZI04667.1\|2922047_2922971_-\|acyltransferase	gnl\|CDD\|225813	COG3274, COG3274, Predicted O-acyltransferase [General function prediction only].	6.63632e-09
CP027036.1\|AZI04670.1\|2926420_2927377_+\|formimidoylglutamase	gnl\|CDD\|234974	PRK01722, PRK01722, formimidoylglutamase; Provisional.	8.10638e-178
CP027036.1\|AZI04674.1\|2931616_2932999_+\|amino-acid-permease	gnl\|CDD\|182566	PRK10580, proY, putative proline-specific permease; Provisional.	0
CP027036.1\|AZI07070.1\|2934324_2935614_-\|adenosylmethionine--8-amino-7-oxononanoate-transaminase	gnl\|CDD\|181189	PRK07986, PRK07986, adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated.	0
CP027036.1\|AZI04683.1\|2940850_2942872_+\|excinuclease-ABC-subunit-B	gnl\|CDD\|235395	PRK05298, PRK05298, excinuclease ABC subunit UvrB.	0
CP027036.1\|AZI04677.1\|2935827_2936868_+\|biotin-synthase	gnl\|CDD\|185063	PRK15108, PRK15108, biotin synthase; Provisional.	0
CP027036.1\|AZI04679.1\|2938005_2938761_+\|malonyl-[acyl-carrier-protein]-O-methyltransferase-BioC	gnl\|CDD\|182340	PRK10258, PRK10258, biotin biosynthesis protein BioC; Provisional.	1.7976e-160
CP027036.1\|AZI04668.1\|2923666_2924950_-\|putative-acyl-CoA-thioester-hydrolase	gnl\|CDD\|236709	PRK10531, PRK10531, putative acyl-CoA thioester hydrolase.	0
CP027036.1\|AZI04678.1\|2936864_2938022_+\|8-amino-7-oxononanoate-synthase	gnl\|CDD\|235655	PRK05958, PRK05958, 8-amino-7-oxononanoate synthase; Reviewed.	0
CP027036.1\|AZI04669.1\|2925206_2926424_+\|imidazolonepropionase	gnl\|CDD\|236478	PRK09356, PRK09356, imidazolonepropionase; Validated.	0
CP027036.1\|AZI04673.1\|2929991_2931518_+\|histidine-ammonia-lyase	gnl\|CDD\|236484	PRK09367, PRK09367, histidine ammonia-lyase; Provisional.	0
CP027036.1\|AZI04676.1\|2933777_2934254_-\|kinase-inhibitor	gnl\|CDD\|182339	PRK10257, PRK10257, putative kinase inhibitor protein; Provisional.	7.58373e-117
CP027036.1\|AZI04681.1\|2939417_2940140_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|223487	COG0410, LivF, ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism].	3.17026e-74
CP027036.1\|AZI04680.1\|2938753_2939476_+\|ATP-dependent-dethiobiotin-synthetase-BioD	gnl\|CDD\|234625	PRK00090, bioD, ATP-dependent dethiobiotin synthetase BioD.	4.52132e-105
CP027036.1\|AZI04671.1\|2927438_2928164_+\|histidine-utilization-repressor	gnl\|CDD\|184961	PRK14999, PRK14999, histidine utilization repressor; Provisional.	3.37417e-172

>CP027036.1|AZI04675.1|2933244_2933514_-|hypothetical-protein
MAAKHGAAETAGAGGLNIAETFPEGRGSPHGCGLRAVFCKDAASARPEACRDKSKAPRSGDVAGRSPGVQGAAATGRPLCAPCSMRNIT
>CP027036.1|AZI04674.1|2931616_2932999_+|amino-acid-permease
MQQQHKPHLLRGLNARHIRFIALGSAIGTGLFYGSASAIKAAGPAVLLAYLIGGAAVFIVMRALGEMAVRNPVSGSFGSYARQYLGPLAGFITGWTYTFEMVIVALADVTAFGIYMGLWYPDVPRWIWILSIIFFIGAMNLCNVRVFGEMEFWLSLVKVVAIIAMMLAGAGIIFFGFGHSFPATGLENLWSHGGFAPNGWQGVIASLGIVMFAFGGVEIIGVTAAEAKDPKKVIPQAINTIPLRIILFYVCTLAVLMAIFPWNSFGEQGSPFVLIFDGLGIPAAATILNIIVISASISAINSDIFGAGRMMYGMSKEGLAPKSFQRIASNGVPWMTVVVMGGALLAAVVLNYLIPEQVFVLIASLAAFATVWVWLMILLSHFAMRRGLSAEERSQIAFPIPFWPVAPLLTLLFMGLVIAVLGMFAETRMALIAGLVWLGLLTVVWYARVRKTALQVATEQ
>CP027036.1|AZI04673.1|2929991_2931518_+|histidine-ammonia-lyase
MKSLTLIPGQLSLSQLRDVYSHPVNITLDSGAFAAIDESVACVNAILAEGRTAYGINTGFGLLAQTRISTEDLENLQRSLVLSHAAGVGEPLDDDLTRLIMVLKINSLSRGFSGIRLSVIQALIGLVNAGVTPWIPAKGSVGASGDLAPLAHMSLTLLGEGKARVRGGEWLPATEALRQVGLEPITLAAKEGLALLNGTQASTAFALRGLFEAEDLFASAVVCGALTTEAALGSRRPFDARIHEVRGQRGQIDAAALYRHLLTDDSAISQSHHNCSKVQDPYSLRCQPQVMGACLTQIRQAAEVLLAEANAVSDNPLVFAAENDVISGGNFHAEPVAMAADNIALAIAEIGSLSERRIALMMDSHMSQLPPFLVKNGGVNSGFMIAQVTAAALASENKALSHPHSVDSLPTSANQEDHVSMAPAAGRRLWAMAENTRGVLAVEWLAAAQGLDMREGLTTSPLLEEARHLLRERVPHYTQDRYFAPDIDNAIALLAARHLTRLLPAVLH
>CP027036.1|AZI04672.1|2928306_2929995_+|urocanate-hydratase
MSQSKYRQLDVRAPRGTTLTAKSWLTEAPLRMLMNNLDPDVAENPHELVVYGGIGRAARNWECYDAIVKALKNLESDETLLVQSGKPVGVFKTHENSPRVLIANSNLVPHWATWEHFNELDAKGLAMYGQMTAGSWIYIGSQGIVQGTYETFVEAGRQHYQGSLKGRWVLTAGLGGMGGAQPLAATLAGACSLNIECQQSRIDFRLRTRYVDEQATSLDDALARIKKYTAEGRAISIALCGNAAEIVPELVKRGVRPDMVTDQTSAHDPLHGYLPKGWSWEEYQQKAESDPQGTILAAKRSMADHVQAMLAFHEMGVPTFDYGNNIRQMAQEVGVSNAFDFPGFVPAYIRPLFCRGIGPFRWVALSGDPQDIYKTDAKVKEIIKDDQHLHHWLDMARERISFQGLPARICWVGLEWRQKLGLAFNEMVRSGEVSAPIVIGRDHLDSGSVASPNRETEAMRDGSDAVSDWPLLNALLNTASGATWVSLHHGGGVGMGFSQHSGMVIVCDGTDEAAARIARVLHNDPATGVMRHADAGYEIAIECAAEQGLNLPMVAATQGNAK
>CP027036.1|AZI04671.1|2927438_2928164_+|histidine-utilization-repressor
MFAQQPRSAPAPFYEKVKQAISEKIHSGVWRPHDRIPSEAELVAQFGFSRMTINRALRELTDEGLLVRLQGVGTFVAEPKGQSALFEVRSIAAEIVARHHQHRCEVLLLEETRADHIQATALSVPEGTRIFHSLMVHYENEVPVQIEDRCVNAAVVPDYLHQDYTATTPHDYLSLIAPLTEGEHIVEAVQATAEECALLHIHAHDPCLLIRRRTWSTTHIVSHARLLFPGSRYRLQGRFGS
>CP027036.1|AZI04670.1|2926420_2927377_+|formimidoylglutamase
MMLWQATPASLWQGRDDSAEAPNALRLFQTIVRAERFAPQEMPGDIALLGFACDEGVRRNKGRTGAADGPATLRRALANMASHQGHDRCVDMGTISVDGEQLEAAHQALREAVADCQRVGKRTLVLGGGHETAFGHGAGVLDAFPGEKVGIINLDAHLDLRFADCASSGTPFRQLALECDAQQRGFHYTCIGVSRAANTQALWDEAARRQVAIVEDLEVLTAFETRVLPELERNIAQFDRLYLTIDLDVLPAREMPAVSAPAALGVPLATLLRIVEPLCRNGKLQAVDLVEFNPLFDIDGQGARAAARLAWQIAHWWR
>CP027036.1|AZI04669.1|2925206_2926424_+|imidazolonepropionase
MTEATSELVIWRNGRLATLNPDHAQPYGLLERHALLVRDGRIAAIVAEDDVPSGRSIDLEGRLVTPGLIDCHTHLVFGGSRAQEWEQRLNGVSYQTISASGGGINSTVRATRDSSEAELLALAQPRLERLLREGVTTLEIKSGYGLDLPNERKMLRVARQLADHNGVELSATLLSAHATPPEYQGDADGYITLVCETILPTLWQEGLFESVDVFCENVGFSPQQTERVFQAAQALGIPVKGHVEQLSSLGGAQLVSRYHGLSADHIEYLTEEGVAAMRESGTVAALLPGAFYFLNETRKPPVELLRKYQVPMAVATDFNPGTSPFASLHLAMNMACVKFGLTPEEAWAGVTRHAARALGRQASHGQLAPGFVANFAIWDAEHPVEMVYEPGRSPLWHRVVQGELQ
>CP027036.1|AZI04668.1|2923666_2924950_-|putative-acyl-CoA-thioester-hydrolase
MNTYSVSRLALALAFGVTLSACSSTPADQQPSTQTAPGTTARPILNAEEAKNFTPAAYFQSLAPNAAAWTPSAISLPAQPDFIVGPAGTQGVTHTTIQAAVDAAIARHSNRRLYIAIMPGEYPGTVYVPAAPGALTLYGTGDKPIDVKISEAIDSEMDRNTWRRLVNPGGKYMPGKPAWYMFDSCQSKSAATIGVMCSAVFWSQNNGLQLQNLTIANNLGDSVDAGTHQAVALRSDGDQVQINKVNILGRQNTFFVTNSGVQNRLQDNRQTRTLVTNSYIEGDVDIVSGRGAVVFDNTDFRVVNSRTQKEAYVFAPATLKSVTYGFLATNSRFTASGDNVAQLGRALDVDGNSNGQVVIRDSAINEGFNIAQPWAAAVGSGRPFSGNTGSADDKGNLQRNLNDNGFNRMWEYNNRGVGSTVVAEPKQ
>CP027036.1|AZI04667.1|2922047_2922971_-|acyltransferase
MTAVTFFTIYNTWDRFDYDYHWILGLLTFISTIATPLFFVVAGYLDAQTRHDANWQIGKIKSVVIVFLFWVTVYYVWEPYQRGYLIQPWFIFALIVIYTFHPLIAWLSQRRGLFFAVLLTLLCCSYGYDLLSVIYPDRHLFSLPPQYRLWTWLLFYLTGQLFNDPKVAEWIRNPQVIKGSIIALPFVYLFTWFYERHFFFALFKADRNAFILTGSQIYILIVLLVIAANAVQFKKNREWKEAVLATVSKAMTGVYILHYSVFHLLVMLIPVHSLATKLGVIALTFVLSVLISLAALSSTLLRKVITL
>CP027036.1|AZI04666.1|2921524_2922031_+|hypothetical-protein
MRGKSVMLLAGLASLAQANELNLYSVNTGSYVYHLTNNHGQYTENFENHFFSVERKFSADSKYSLLLGTMNNSFNDRCLALGVRRDWYHSGSGWTFKGVYGYTGEFFFDAFEHCGDHGSYKDFKDATGIGFSPYIYHAIQYNFTDYFAVESGIIIPSVFVISIQWSFR
>CP027036.1|AZI04676.1|2933777_2934254_-|kinase-inhibitor
MKLISHDLQDGGKLPNRHVFNGMGYDGDNISPHLMWDDVPAGTKSFVVTCYDPDAPTGSGWWHWVVANLPADTRVLPQGAGSGQAELPEEAVQTRTDFGKAGYGGAAPPKGETHRYIFTVHALDVEKIEVDAEASGAMVGFNVHFHSLASASITALFS
>CP027036.1|AZI07070.1|2934324_2935614_-|adenosylmethionine--8-amino-7-oxononanoate-transaminase
MTLDDLAFDRRHIWHPYTSMTSPLPVYPVVSAHGCELSLAGGEQLVDGMSSWWAAIHGYNHPRLNAALKGQIDQMSHVMFGGITHPPAVALCRQLVAMTPASLECVFLADSGSVAVEVAMKMALQYWQAKGEPRRRFLTFRNGYHGDTFGAMSVCDPQNSMHSLWQGYLPDNLFAPAPQSRFDGEWDEMDMVPFARLMAAHRHEIAAVILEPIVQGAGGMRMYHPEWLKRVRKMCDREGILLIADEIATGFGRTGKLFACEHAGITADILCLGKALTGGTMTLSAAITTRTVAETISNGEAGCFMHGPTFMGNPLACAVAGESLRLLESGEWQPQVTAIEAQLQAELAPARGSALVADVRVLGAIGVVETRRPVNMAALQRFFVEQGVWIRPFGRLIYLMPPYIITPEQLTRLTRAVNQAVQDETFFSE
>CP027036.1|AZI04677.1|2935827_2936868_+|biotin-synthase
MAHQPRWTMSQVTELFNKPLIDLLFEAQQIHRQHFDPRQVQVSTLLSIKTGACPEDCKYCPQSARYKTGLEAERLMEVEQVLESARQAKNAGSTRFCMGAAWKNPNDRDMPYLEQMVKGVKALGLESCMTLGTLTDSQAQRLAEAGLDYYNHNLDTSPEFYGNIITTRTYQERLDTLDKVRDAGIKVCSGGIVGLGESVKDRAGLLLQLANLPTPPESVPINMLVKVKGTPLADNDDVDAFDFIRTIAIARIMMPTSYVRLSAGREQMNEQTQAMCFMAGANSIFYGCKLLTTPNPEEDKDLQLFRKLGINPQQTAVLEGDNEQQQRLEQALLTPDTEEYYNAAAL
>CP027036.1|AZI04678.1|2936864_2938022_+|8-amino-7-oxononanoate-synthase
MSWQQRIDRALDERRAAEAFRRRLPVTHGAGRWLEREGERWLNFSSNDYLGLSQHPAIIAAWQQGATRYGVGAGGSGHVSGYSEAHRALEEALVDWLGYPRALLFISGFAANQALIAALVEKDDRIVADRLSHASLLEAASLSPAKLRRFTHNDPQQLAQLLAKPLAGEQLAVTEGIFSMDGDSAPLAAIHAATQAAGAVLLVDDAHGVGVVGDEGRGSCAAQAVRPELLVVTFGKAFGVSGAAVLCDEAMADYLLQFARHLIYSTAMPPAQAVALSAALGIIRSDEGRQRRDILAARIRQFREGMGKVSLGLTDSVSAIQPLIVGDNARALNLACRLRDAGCWATAIRPPTVPVGSARLRLTLTAAHHAEDINRLLEVLHGHSE
>CP027036.1|AZI04679.1|2938005_2938761_+|malonyl-[acyl-carrier-protein]-O-methyltransferase-BioC
MATVNKQAVAAAFGRAASGYTQHDELQRRCADLLLRQLARRDFAQVLDAGCGPGSMSRYWREAGSVVTALDLSAGMLAQAQRNDAAQHYLLGDIEALPLPDACVDLAWSNLAVQWCDDLRAAIGELYRVARPGGRVAFSTLLADSLPELNQAWQAIDDRPHANRFLSEAAVRAALSGLRATGEVHQISLPFADALSAMRSLKGIGATHLHQGRTAAPLGRGKLRELQLAWPQRQGICPLTYSLFTGVIERD
>CP027036.1|AZI04680.1|2938753_2939476_+|ATP-dependent-dethiobiotin-synthetase-BioD
MTKRFFVTGTDTEVGKTIASSALLQAANLLGFHTAGYKPVASGSELTGDGLRNEDALALQRHSRVALRYDQVNPYTFAEPTSPHIISADEGRPIAAARLSSGLRELEGLADWVLVEGAGGWFTPLSDSLTFADWAQAEQLPVILVVGVKLGCINHAMLTAQAVRQAGLPLAGWIANDVQPPGKRHAEYLATLKNRLAAPFLGEIPWLADIAQRDDLGQYLDLRALDPALSTAPAAAHPAP
>CP027036.1|AZI04681.1|2939417_2940140_-|ABC-transporter-ATP-binding-protein
MLNLQAVNHFYGNQHSLWNVDLVLRPGECIGVLGREGMGKTTLVNCIAGHLPVASGRMTWHDIGAPPQDLTPLSAQSRSAIGIGYVPQDKRIFSQLSVEENLHIALAAGKPGANASGGEIYEHFPELYALRQRKGASLSDDDQYQLALARALIVQPRLLILDEPSRGRGPRCLQKLADLLLRLNRDIGLTVLLAEQHLPFIRRVADRFCVLHRGRNVAEGDIMALDEPLLAQWITPDPAP
>CP027036.1|AZI04682.1|2940226_2940439_-|dTDP-4-dehydrorhamnose-reductase
MDNCPQPKTTAARRLSPFAVNRVAKNFYRTIFDNYPLKAARFLLLFAPPFSVGHRKSAAPALTRPDGIGV
>CP027036.1|AZI07071.1|2940438_2940618_-|hypothetical-protein
MKLLWQQMTLFLHPLILSNKLIFKIFKEKTPFAPIQPQAAYALACRRFSNSNTQGYPQE
>CP027036.1|AZI04683.1|2940850_2942872_+|excinuclease-ABC-subunit-B
MSKSFVLHSAFRPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPTMVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIEQMRLSATKALLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTVGMLIDQRAILRRLAELQYTRNDQAFQRGTFRVRGEVIDVFPAESDDIALRIELFDEEVERLSLFDPLTGHVEGTVPRYTIYPKTHYVTPRERIVQAMEEIKLELAERRKVLLANNKLLEEQRLTQRTQFDLEMMNELGYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGLLVIDESHVTVPQIGGMYRGDRARKETLVEYGFRLPSALDNRPMKFEEFEALAPQTIYVSATPGAYELDKSGGEVVDQVVRPTGLLDPIIEVRPVATQVDDLLSEIRLRTAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDIDTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAARNVNGKAILYGDKITPSMAKAIGETERRREKQQRYNEEHGIVPQGLNKKVVDILQLGQGLAKTKAKGRGKAKAVEPAGLSAVDMTPKALQQKIHELEGQMMQHAQNLEFEEAAQIRDQLHQLRELFIAAS

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Identity
CP027036_2	2.1\|2547792\|36\|CP027036\|CRISPRCasFinder	2547792-2547827	36	MK448233	Klebsiella phage ST11-VIM1phi8.1, complete genome	8447-8482	1.0
CP027036_2	2.1\|2547792\|36\|CP027036\|CRISPRCasFinder	2547792-2547827	36	MK448235	Klebsiella phage ST512-KPC3phi13.1, complete genome	8447-8482	1.0
CP027036_2	2.1\|2547792\|36\|CP027036\|CRISPRCasFinder	2547792-2547827	36	MK448231	Klebsiella phage ST101-KPC2phi6.1, complete genome	11383-11418	1.0

1. spacer 2.1|2547792|36|CP027036|CRISPRCasFinder matches to MK448233 (Klebsiella phage ST11-VIM1phi8.1, complete genome) position: , mismatch: 0, identity: 1.0

acgcaaacccagtaaccacgctgcgtaccggcgagg	CRISPR spacer
acgcaaacccagtaaccacgctgcgtaccggcgagg	Protospacer
************************************

2. spacer 2.1|2547792|36|CP027036|CRISPRCasFinder matches to MK448235 (Klebsiella phage ST512-KPC3phi13.1, complete genome) position: , mismatch: 0, identity: 1.0

acgcaaacccagtaaccacgctgcgtaccggcgagg	CRISPR spacer
acgcaaacccagtaaccacgctgcgtaccggcgagg	Protospacer
************************************

3. spacer 2.1|2547792|36|CP027036|CRISPRCasFinder matches to MK448231 (Klebsiella phage ST101-KPC2phi6.1, complete genome) position: , mismatch: 0, identity: 1.0

acgcaaacccagtaaccacgctgcgtaccggcgagg	CRISPR spacer
acgcaaacccagtaaccacgctgcgtaccggcgagg	Protospacer
************************************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

706120 : 775643

uncultured_Caudovirales_phage(61.11%)

terminase,head,protease,integrase,tRNA,portal,capsid,tail

attL 741879:741896|attR 757874:757891

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZI02646.1\|706120_706615_-\|protease	ClpXP protease specificity-enhancing factor	A0A1S5R3H3	Pseudomonas_phage	1.5e-26	54.8
AZI02647.1\|706618_707257_-	stringent starvation protein A	NA	NA	NA	NA
AZI02648.1\|707255_707459_+	hypothetical protein	NA	NA	NA	NA
AZI02649.1\|707568_707961_-	30S ribosomal protein S9	NA	NA	NA	NA
AZI02650.1\|707976_708405_-	50S ribosomal protein L13	NA	NA	NA	NA
AZI02651.1\|708670_709798_-	cell division protein ZapE	NA	NA	NA	NA
AZI02652.1\|709988_710387_+	hypothetical protein	NA	NA	NA	NA
AZI02653.1\|710560_711928_+\|protease	serine endoprotease DegQ	A0A1B1IT49	uncultured_Mediterranean_phage	6.0e-22	25.3
AZI02654.1\|712015_713074_+\|protease	serine endoprotease DegS	NA	NA	NA	NA
AZI02655.1\|713210_714149_-	malate dehydrogenase	NA	NA	NA	NA
AZI02656.1\|714563_715034_+	arginine repressor	NA	NA	NA	NA
AZI02657.1\|715409_715673_+	DUF1471 domain-containing protein	NA	NA	NA	NA
AZI02658.1\|715771_716038_+	DUF1471 domain-containing protein	NA	NA	NA	NA
AZI02659.1\|716088_716364_-	hypothetical protein	NA	NA	NA	NA
AZI02660.1\|716443_718411_-	p-hydroxybenzoic acid efflux pump subunit AaeB	NA	NA	NA	NA
AZI02661.1\|718416_719349_-	p-hydroxybenzoic acid efflux pump subunit AaeA	NA	NA	NA	NA
AZI02662.1\|719356_719560_-	protein AaeX	NA	NA	NA	NA
AZI02663.1\|719691_720621_+	HTH-type transcriptional activator AaeR	NA	NA	NA	NA
AZI02664.1\|720656_722102_-\|protease	metalloprotease TldD	NA	NA	NA	NA
AZI02665.1\|722190_725988_-	AsmA2 domain-containing protein	NA	NA	NA	NA
AZI02666.1\|726025_727495_-	ribonuclease G	NA	NA	NA	NA
AZI02667.1\|727497_728079_-	septum formation inhibitor Maf	NA	NA	NA	NA
AZI02668.1\|728086_728575_-	rod shape-determining protein MreD	NA	NA	NA	NA
AZI02669.1\|728574_729567_-	rod shape-determining protein MreC	NA	NA	NA	NA
AZI02670.1\|729637_730681_-	rod shape-determining protein	F2Y0P3	Organic_Lake_phycodnavirus	6.7e-05	22.3
AZI06978.1\|730658_730865_+	hypothetical protein	NA	NA	NA	NA
AZI02671.1\|730986_732927_-	RNase E specificity factor CsrD	NA	NA	NA	NA
AZI02672.1\|733006_733198_-	hypothetical protein	NA	NA	NA	NA
AZI02673.1\|733426_734428_+	protein-methionine-sulfoxide reductase catalytic subunit MsrP	NA	NA	NA	NA
AZI02674.1\|734427_735036_+	protein-methionine-sulfoxide reductase heme-binding subunit MsrQ	NA	NA	NA	NA
AZI02675.1\|735259_735712_+	type II 3-dehydroquinate dehydratase	NA	NA	NA	NA
AZI02676.1\|735734_736202_+	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA
AZI02677.1\|736212_737562_+	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA
AZI02678.1\|737672_737915_+	hypothetical protein	NA	NA	NA	NA
AZI02679.1\|737904_739356_+	sodium/panthothenate symporter	NA	NA	NA	NA
AZI02680.1\|739367_740249_+	50S ribosomal protein L11 methyltransferase	NA	NA	NA	NA
AZI02681.1\|740254_740449_+	hypothetical protein	NA	NA	NA	NA
AZI02682.1\|740606_741572_+\|tRNA	tRNA dihydrouridine synthase DusB	NA	NA	NA	NA
AZI02683.1\|741596_741893_+	Fis family transcriptional regulator	NA	NA	NA	NA
741879:741896	attL	NA	NA	NA	NA
AZI02684.1\|742046_742238_-	hypothetical protein	NA	NA	NA	NA
AZI02685.1\|742240_743902_-\|terminase	terminase large subunit	A0A2H4JB64	uncultured_Caudovirales_phage	0.0e+00	98.0
AZI02686.1\|743885_744242_-\|terminase	phage terminase small subunit P27 family	A0A2H4JHS3	uncultured_Caudovirales_phage	5.5e-60	99.2
AZI02687.1\|744199_744391_-\|terminase	terminase	NA	NA	NA	NA
AZI02688.1\|744517_744961_-	HNH endonuclease	A0A2H4JAS8	uncultured_Caudovirales_phage	2.8e-77	91.8
AZI02689.1\|744960_745260_-\|head,tail	phage gp6-like head-tail connector protein	A0A2H4JD08	uncultured_Caudovirales_phage	3.4e-39	80.8
AZI02690.1\|745256_745592_-\|head,tail	head-tail adaptor	A0A2H4JHK5	uncultured_Caudovirales_phage	3.7e-26	57.8
AZI02691.1\|745588_746830_-\|portal	phage portal protein	A0A2H4JFJ9	uncultured_Caudovirales_phage	1.0e-230	96.5
AZI02692.1\|746831_747392_-\|head,protease	HK97 family phage prohead protease	A0A2H4JB68	uncultured_Caudovirales_phage	1.2e-98	95.7
AZI02693.1\|747443_748610_-\|capsid	phage major capsid protein	A0A2H4JED2	uncultured_Caudovirales_phage	9.8e-207	95.9
AZI02694.1\|748873_749386_+	hypothetical protein	NA	NA	NA	NA
AZI02695.1\|749434_749770_-	hypothetical protein	NA	NA	NA	NA
AZI02696.1\|750112_752248_-	DNA primase	A0A1W6JPG0	Morganella_phage	3.4e-205	62.4
AZI02697.1\|752247_752613_-	hypothetical protein	NA	NA	NA	NA
AZI02698.1\|752609_752978_-	hypothetical protein	A0A2H4JCX7	uncultured_Caudovirales_phage	3.7e-51	81.1
AZI02699.1\|752974_753289_-	hypothetical protein	NA	NA	NA	NA
AZI02700.1\|753281_753470_-	hypothetical protein	NA	NA	NA	NA
AZI06979.1\|753462_753642_-	host cell division inhibitor Icd-like protein	A0A2H4JGW3	uncultured_Caudovirales_phage	2.6e-26	94.9
AZI02701.1\|753865_754060_+	toxin-antitoxin system HicB family antitoxin	NA	NA	NA	NA
AZI02702.1\|754183_754963_-	hypothetical protein	Q8HA02	Enterobacteria_phage	6.2e-40	51.5
AZI02703.1\|754973_755258_-	transcriptional regulator	NA	NA	NA	NA
AZI02704.1\|755439_756381_-	hypothetical protein	NA	NA	NA	NA
AZI02705.1\|756473_757700_-\|integrase	site-specific integrase	A0A2H4JB45	uncultured_Caudovirales_phage	1.8e-150	62.2
AZI02706.1\|757975_758626_-	acrEF/envCD operon transcriptional regulator	NA	NA	NA	NA
757874:757891	attR	NA	NA	NA	NA
AZI02707.1\|759004_760144_+	MexX family efflux pump subunit	NA	NA	NA	NA
AZI02708.1\|760156_763267_+	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA
AZI02709.1\|763560_763782_+	hypothetical protein	NA	NA	NA	NA
AZI06980.1\|769722_770277_+	gamma carbonic anhydrase family protein	NA	NA	NA	NA
AZI02710.1\|770252_770510_-	DUF1488 domain-containing protein	NA	NA	NA	NA
AZI02711.1\|770506_771325_-	shikimate dehydrogenase	NA	NA	NA	NA
AZI02712.1\|771328_771901_-	L-threonylcarbamoyladenylate synthase type 1 TsaC	NA	NA	NA	NA
AZI02713.1\|771905_772448_-	hypothetical protein	NA	NA	NA	NA
AZI02714.1\|772473_772947_-	DUF494 domain-containing protein	NA	NA	NA	NA
AZI02715.1\|772918_774043_-	DNA-protecting protein DprA	NA	NA	NA	NA
AZI02716.1\|774171_774681_+	peptide deformylase	E3SLL2	Synechococcus_phage	2.6e-18	40.3
AZI02717.1\|774695_775643_+\|tRNA	methionyl-tRNA formyltransferase	E3SNR5	Prochlorococcus_phage	2.2e-07	37.2

DBSCAN-SWA_2

2314222 : 2325876

Enterobacteria_phage(70.0%)

integrase

attL 2302356:2302370|attR 2325413:2325427

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2302356:2302370	attL	NA	NA	NA	NA
AZI04101.1\|2314222_2316556_-	DNA primase	Q7M2A8	Enterobacteria_phage	0.0e+00	82.2
AZI04102.1\|2316567_2316888_-	hypothetical protein	NA	NA	NA	NA
AZI04103.1\|2316884_2317112_-	hypothetical protein	NA	NA	NA	NA
AZI04104.1\|2317108_2317666_-	Ash-like/host cell division inhibitor Icd-like protein	Q7M2A7	Enterobacteria_phage	1.8e-33	70.4
AZI04105.1\|2317662_2317929_-	AlpA family transcriptional regulator	Q7M299	Enterobacteria_phage	2.6e-30	71.6
AZI04106.1\|2318470_2319208_+	glycoprotein 3	Q7M2A2	Enterobacteria_phage	9.0e-73	60.7
AZI04107.1\|2319204_2319450_+	hypothetical protein	Q7M294	Enterobacteria_phage	1.9e-19	58.0
AZI04108.1\|2319467_2320034_+	Polarity suppression protein	Q7M2A1	Enterobacteria_phage	1.5e-59	64.3
AZI04109.1\|2320602_2321028_-	hypothetical protein	NA	NA	NA	NA
AZI04110.1\|2321027_2321978_-	cobyrinic acid a,c-diamide synthase	A0A1X9IGI7	Lactococcus_phage	1.2e-13	27.1
AZI04111.1\|2321965_2323156_-\|integrase	integrase	Q7M297	Enterobacteria_phage	6.4e-145	62.7
AZI04112.1\|2323508_2324762_-	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	8.9e-89	44.9
AZI04113.1\|2324772_2325876_-	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	4.8e-62	40.5
2325413:2325427	attR	NA	NA	NA	NA

DBSCAN-SWA_3

2516203 : 2582011

Escherichia_phage(25.0%)

terminase,head,protease,integrase,tRNA,tail,coat,lysis

attL 2539619:2539665|attR 2588754:2588800

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZI04291.1\|2516203_2516683_-\|tRNA	Cys-tRNA(Pro) deacylase	NA	NA	NA	NA
AZI04292.1\|2516885_2517680_-	conjugal transfer protein TraB	NA	NA	NA	NA
AZI07050.1\|2517811_2520313_-	copper-exporting P-type ATPase CopA	A0A218MNH6	uncultured_virus	1.6e-113	38.0
AZI04293.1\|2520419_2520830_+	HTH-type transcriptional regulator CueR	NA	NA	NA	NA
AZI04294.1\|2520826_2521285_-	NfeD family protein	NA	NA	NA	NA
AZI04295.1\|2521281_2522199_-	SPFH/Band 7/PHB domain protein	NA	NA	NA	NA
AZI04296.1\|2522339_2523017_+	iron ABC transporter ATP-binding protein FetA	G3M9Y6	Bacillus_virus	7.8e-23	33.5
AZI04297.1\|2523003_2523786_+	iron export ABC transporter permease subunit FetB	NA	NA	NA	NA
AZI04298.1\|2523893_2524748_-	co-chaperone YbbN	NA	NA	NA	NA
AZI04299.1\|2524806_2525577_-	oxidoreductase	NA	NA	NA	NA
AZI04300.1\|2525605_2526232_-\|protease	multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1	NA	NA	NA	NA
AZI04301.1\|2526199_2526886_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.1e-31	35.7
AZI04302.1\|2526882_2529297_+	ABC transporter permease	NA	NA	NA	NA
AZI04303.1\|2532036_2533113_-\|tRNA	tRNA 2-selenouridine(34) synthase MnmH	NA	NA	NA	NA
AZI04304.1\|2533224_2534292_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA
AZI04305.1\|2534288_2534798_-	5-(carboxyamino)imidazole ribonucleotide mutase	NA	NA	NA	NA
AZI04306.1\|2534730_2534898_+	MarR family transcriptional regulator	NA	NA	NA	NA
AZI04307.1\|2534894_2535233_-	hypothetical protein	NA	NA	NA	NA
AZI04308.1\|2535340_2536063_-	UDP-2,3-diacylglucosamine diphosphatase	NA	NA	NA	NA
AZI04309.1\|2536066_2536561_-	peptidylprolyl isomerase	NA	NA	NA	NA
AZI04310.1\|2536736_2538122_+\|tRNA	cysteine--tRNA ligase	M1PG92	Moumouvirus	3.5e-46	35.4
AZI04311.1\|2538167_2538380_-	ribosome-associated protein	NA	NA	NA	NA
AZI04312.1\|2538381_2539248_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase	A0A249XZQ2	Enterococcus_phage	1.3e-30	34.8
2539619:2539665	attL	NA	NA	NA	NA
AZI04313.1\|2539678_2540842_-\|integrase	site-specific integrase	G8C7S0	Escherichia_phage	3.3e-202	87.3
AZI04314.1\|2540718_2541054_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
AZI04315.1\|2541055_2541271_-	conjugal transfer protein TraR	A0A0K2FI84	Escherichia_phage	4.0e-13	52.9
AZI04316.1\|2541272_2541491_-	hypothetical protein	A0A1I9LJM7	Stx_converting_phage	1.2e-09	47.2
AZI04317.1\|2541487_2542255_-	dcm methylase	D5LH17	Escherichia_phage	1.7e-66	53.4
AZI04318.1\|2542251_2542908_-	DNA methyltransferase	G8C7S6	Escherichia_phage	2.7e-113	87.5
AZI04319.1\|2542904_2543063_-	DUF1317 domain-containing protein	A0A0N7CHV0	Escherichia_phage	3.0e-10	60.8
AZI04320.1\|2543059_2543740_-	exonuclease	A0A0M3ULE0	Salmonella_phage	7.9e-124	93.4
AZI04321.1\|2543736_2544582_-	phage recombination protein Bet	A0A1I9KF88	Aeromonas_phage	6.9e-69	59.2
AZI04322.1\|2544597_2544882_-	host nuclease inhibitor GamL	G8C7T1	Escherichia_phage	8.0e-30	62.8
AZI04323.1\|2544970_2545165_-	hypothetical protein	NA	NA	NA	NA
AZI04324.1\|2545264_2545480_-	hypothetical protein	B5WZV1	Pseudomonas_phage	1.6e-09	48.6
AZI04325.1\|2545830_2546520_-	helix-turn-helix transcriptional regulator	G8C7U1	Escherichia_phage	4.3e-61	52.2
AZI04326.1\|2546647_2546881_+	transcriptional regulator	G8C7U2	Escherichia_phage	4.3e-13	50.7
AZI04327.1\|2546921_2547143_+	transcriptional regulator	G8EYH8	Enterobacteria_phage	6.9e-05	41.7
AZI04328.1\|2547367_2548267_+	DNA replication protein	F1C5C3	Cronobacter_phage	5.4e-88	54.9
AZI04329.1\|2548256_2549687_+	replicative DNA helicase	Q9MCT4	Escherichia_phage	2.6e-185	66.7
AZI04330.1\|2549686_2549980_+	protein ren	O48423	Enterobacteria_phage	3.3e-26	65.6
AZI04331.1\|2549976_2550483_+	hypothetical protein	A0A0A6Z565	Enterobacter_phage	3.0e-27	59.6
AZI04332.1\|2550589_2551432_+	addiction module toxin RelE	A0A2H4FRZ0	Salmonella_phage	1.8e-29	60.8
AZI04333.1\|2551604_2552252_+	DUF551 domain-containing protein	A5LH60	Enterobacteria_phage	4.5e-12	32.6
AZI04334.1\|2552251_2552500_+	hypothetical protein	NA	NA	NA	NA
AZI04335.1\|2552752_2553208_+	hypothetical protein	K7P7B8	Enterobacteria_phage	8.0e-56	69.5
AZI04336.1\|2553207_2553378_+	hypothetical protein	G8C7V4	Escherichia_phage	1.3e-14	73.2
AZI04337.1\|2553370_2554006_+	NinG family protein	M9NYX8	Enterobacteria_phage	2.7e-81	77.9
AZI04338.1\|2554002_2554140_+	YlcG family protein	NA	NA	NA	NA
AZI04339.1\|2554132_2554663_+	HNH endonuclease	A0A193GYW9	Enterobacter_phage	5.2e-30	43.1
AZI04340.1\|2554659_2555349_+	antiterminator	I6PDF8	Cronobacter_phage	1.4e-56	54.5
AZI04341.1\|2556258_2556507_+\|lysis	lysis protein	NA	NA	NA	NA
AZI04342.1\|2556509_2557040_+	lysozyme	G9L6J6	Escherichia_phage	6.0e-79	78.5
AZI04343.1\|2557036_2557501_+\|lysis	lysis protein	Q76H63	Enterobacteria_phage	2.4e-55	73.2
AZI04344.1\|2557606_2557936_-	hypothetical protein	NA	NA	NA	NA
AZI04345.1\|2558306_2558909_+	hypothetical protein	G8C7P2	Escherichia_phage	5.4e-76	80.9
AZI04346.1\|2558908_2560381_+\|terminase	terminase	A0A1W6JNY3	Morganella_phage	1.3e-248	82.5
AZI04347.1\|2560393_2561815_+	DUF1073 domain-containing protein	F1C5D7	Cronobacter_phage	9.6e-148	57.1
AZI04348.1\|2561789_2562794_+\|head	phage head morphogenesis protein	F1C5D8	Cronobacter_phage	9.0e-116	69.7
AZI04349.1\|2562835_2563312_+	hypothetical protein	NA	NA	NA	NA
AZI04350.1\|2563384_2564770_+	DUF2213 domain-containing protein	F1C5D9	Cronobacter_phage	2.3e-154	60.0
AZI04351.1\|2564773_2565202_+	hypothetical protein	F1C5E0	Cronobacter_phage	1.6e-42	60.8
AZI04352.1\|2565213_2566308_+\|coat	phage coat protein	F1C5E1	Cronobacter_phage	1.7e-123	62.8
AZI04353.1\|2566318_2566558_+	hypothetical protein	NA	NA	NA	NA
AZI04354.1\|2566560_2566941_+	hypothetical protein	F1C5E2	Cronobacter_phage	5.3e-29	55.3
AZI04355.1\|2566940_2567114_+	50S ribosomal protein L13	I6R0P9	Salmonella_phage	1.4e-13	56.1
AZI04356.1\|2567113_2567476_+	hypothetical protein	A0A173GCE0	Salmonella_phage	1.8e-18	45.0
AZI04357.1\|2567478_2567904_+	hypothetical protein	R9TPP7	Aeromonas_phage	5.1e-28	47.9
AZI04358.1\|2567900_2568293_+	hypothetical protein	G0ZNE4	Cronobacter_phage	5.1e-35	52.7
AZI04359.1\|2568361_2569114_+	DNA breaking-rejoining protein	G0ZNE6	Cronobacter_phage	5.8e-43	42.1
AZI04360.1\|2569166_2569844_+	hypothetical protein	F1C5E8	Cronobacter_phage	4.8e-73	57.9
AZI04361.1\|2570019_2570775_+	DNA-binding protein	K7PGT4	Enterobacteria_phage	2.4e-60	51.0
AZI04362.1\|2570777_2571032_+	hypothetical protein	K7PM89	Enterobacteria_phage	6.7e-20	73.0
AZI04363.1\|2571325_2571796_+	hypothetical protein	NA	NA	NA	NA
AZI04364.1\|2571812_2572172_-	Arc family DNA-binding protein	A0A0P0ZBD1	Stx2-converting_phage	3.8e-16	47.5
AZI04365.1\|2572271_2572442_+	Arc family DNA-binding protein	I6R9A8	Salmonella_phage	6.1e-17	87.0
AZI04366.1\|2572431_2573145_+	hypothetical protein	H6WRU8	Salmonella_phage	3.9e-49	50.2
AZI04367.1\|2573210_2573996_+	phage repressor protein	A0A2L1IV39	Escherichia_phage	1.9e-84	59.7
AZI04368.1\|2574123_2574627_+	hypothetical protein	NA	NA	NA	NA
AZI04369.1\|2574719_2578166_+	hypothetical protein	Q5G8W8	Enterobacteria_phage	1.4e-163	48.6
AZI07051.1\|2578265_2578685_+	hypothetical protein	A0A2P1MXB5	Escherichia_phage	1.8e-30	48.5
AZI04370.1\|2578684_2579155_+	hypothetical protein	R9TPR6	Aeromonas_phage	2.5e-28	41.0
AZI04371.1\|2579151_2579547_+	hypothetical protein	F1C5F2	Cronobacter_phage	8.0e-36	54.0
AZI04372.1\|2579533_2582011_+\|tail	phage tail protein	F1C5A7	Cronobacter_phage	2.7e-198	45.6
2588754:2588800	attR	NA	NA	NA	NA

DBSCAN-SWA_4

3027121 : 3063140

Salmonella_phage(82.93%)

head,plate,integrase,portal,capsid,tail

attL 3027029:3027047|attR 3063213:3063231

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3027029:3027047	attL	NA	NA	NA	NA
AZI04764.1\|3027121_3028174_-\|integrase	integrase	A0A218M4I3	Erwinia_phage	6.1e-107	57.0
AZI04765.1\|3028255_3028777_-	hypothetical protein	NA	NA	NA	NA
AZI04766.1\|3028778_3029981_-	hypothetical protein	NA	NA	NA	NA
AZI04767.1\|3030061_3030943_-	chromosome partitioning protein ParB	A0A1S6KZZ7	Salmonella_phage	6.4e-41	45.3
AZI04768.1\|3031068_3031290_+	regulator	NA	NA	NA	NA
AZI04769.1\|3031322_3031832_+	hypothetical protein	E5G6L3	Salmonella_phage	5.8e-87	98.8
AZI04770.1\|3031839_3032136_+	DUF2724 domain-containing protein	E5G6L4	Salmonella_phage	1.1e-21	90.2
AZI04771.1\|3032221_3032470_-	hypothetical protein	NA	NA	NA	NA
AZI04772.1\|3032551_3032893_+	hypothetical protein	E5G6L5	Salmonella_phage	4.6e-56	99.1
AZI04773.1\|3032960_3033194_+	DUF2732 domain-containing protein	E5G6L6	Salmonella_phage	1.9e-32	97.4
AZI04774.1\|3033193_3033421_+	hypothetical protein	E5G6L7	Salmonella_phage	6.0e-36	98.7
AZI04775.1\|3033417_3033720_+	DUF3850 domain-containing protein	A0A0A8WI22	Clostridium_phage	9.8e-10	42.1
AZI04776.1\|3033716_3034574_+	DNA adenine methylase	E5G6L8	Salmonella_phage	8.6e-160	96.1
AZI04777.1\|3034570_3036985_+	replication endonuclease	E5G6L9	Salmonella_phage	0.0e+00	98.3
AZI04778.1\|3037212_3037464_+	hypothetical protein	NA	NA	NA	NA
AZI04779.1\|3037463_3038948_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5
AZI07073.1\|3039048_3039237_+	hypothetical protein	E5G6M0	Salmonella_phage	5.5e-27	98.4
AZI04780.1\|3039175_3039481_+	DinI family protein	E5G6M1	Salmonella_phage	4.7e-36	100.0
AZI04781.1\|3039930_3040401_+	hypothetical protein	NA	NA	NA	NA
AZI04782.1\|3040405_3041368_+	DNA-processing protein DprA	S6BFL3	Thermus_phage	1.8e-20	30.2
AZI04783.1\|3041393_3042425_-\|portal	phage portal protein	E5G6M3	Salmonella_phage	1.3e-170	87.6
AZI04784.1\|3042424_3044191_-	oxidoreductase	A0A1S6KZW3	Salmonella_phage	0.0e+00	99.7
AZI04785.1\|3044333_3045167_+\|capsid	capsid protein	A0A1S6KZW9	Salmonella_phage	2.2e-123	91.3
AZI04786.1\|3045183_3046242_+\|capsid	phage major capsid protein, P2 family	E5G6M6	Salmonella_phage	2.9e-181	93.4
AZI04787.1\|3046245_3046896_+	hypothetical protein	E5G6M7	Salmonella_phage	1.2e-110	95.8
AZI04788.1\|3046991_3047456_+\|head	head completion/stabilization protein	A0A1S6KZW8	Salmonella_phage	9.3e-76	88.3
AZI04789.1\|3047455_3047659_+\|tail	phage tail protein	E5G6M9	Salmonella_phage	1.4e-31	92.5
AZI04790.1\|3047662_3047878_+	hypothetical protein	E5G6N0	Salmonella_phage	6.9e-26	78.9
AZI07074.1\|3047897_3048371_+	lysozyme	E5G6N1	Salmonella_phage	3.7e-80	91.0
AZI04791.1\|3048372_3048750_+	hypothetical protein	NA	NA	NA	NA
AZI04792.1\|3048746_3049175_+	hypothetical protein	E5G6N2	Salmonella_phage	8.4e-47	75.4
AZI04793.1\|3049104_3049308_+	hypothetical protein	A0A1S6KZX6	Salmonella_phage	2.6e-22	71.6
AZI04794.1\|3049270_3049702_+\|tail	phage tail protein	E5G6N3	Salmonella_phage	1.3e-71	93.7
AZI04795.1\|3049694_3050141_+	phage virion morphogenesis protein	A0A1S6L001	Salmonella_phage	1.9e-62	84.9
AZI04796.1\|3050209_3050788_+\|plate	phage baseplate assembly protein V	A0A1S6KZX7	Salmonella_phage	4.2e-94	87.0
AZI04797.1\|3050784_3051144_+\|plate	baseplate assembly protein	A0A1S6KZZ4	Salmonella_phage	9.5e-52	86.6
AZI04798.1\|3051130_3052039_+\|plate	baseplate assembly protein	A0A1S6KZY6	Salmonella_phage	5.0e-142	89.7
AZI04799.1\|3052031_3052637_+\|tail	phage tail protein I	A0A1S6L000	Salmonella_phage	8.9e-111	92.5
AZI04800.1\|3052633_3054118_+\|tail	phage tail protein	M1TAS6	Escherichia_phage	3.9e-152	78.1
AZI04801.1\|3054120_3054354_+	hypothetical protein	NA	NA	NA	NA
AZI04802.1\|3054334_3054745_-\|tail	tail fiber assembly protein	B6SCW7	Bacteriophage	1.1e-19	43.3
AZI04803.1\|3054747_3055254_-	hypothetical protein	NA	NA	NA	NA
AZI04804.1\|3055993_3057166_+\|tail	phage tail protein	A0A1S6KZY7	Salmonella_phage	1.3e-203	90.3
AZI04805.1\|3057175_3057691_+\|tail	phage major tail tube protein	A0A1S6L002	Salmonella_phage	2.1e-89	95.3
AZI04806.1\|3057745_3058048_+\|tail	phage tail assembly protein	A0A1S6KZZ9	Salmonella_phage	5.3e-40	89.0
AZI04807.1\|3058062_3058182_+\|tail	GpE family phage tail protein	E5G6Q0	Salmonella_phage	2.8e-13	87.2
AZI04808.1\|3058174_3061252_+\|tail	phage tail tape measure protein	E5G6Q1	Salmonella_phage	0.0e+00	62.6
AZI04809.1\|3061248_3061734_+\|tail	phage tail protein	E5G6Q2	Salmonella_phage	6.3e-67	80.6
AZI04810.1\|3061730_3062831_+	late control protein D	A0A1S6KZZ5	Salmonella_phage	1.7e-176	88.0
AZI04811.1\|3062921_3063140_+	transcriptional regulator	Q53ZE7	Salmonella_virus	7.5e-20	69.0
3063213:3063231	attR	NA	NA	NA	NA

DBSCAN-SWA_5

3097557 : 3107021

Dickeya_phage(16.67%)

tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZI04841.1\|3097557_3098673_+	macrolide transporter subunit MacA	A0A140XAI1	Dickeya_phage	1.3e-06	52.7
AZI04842.1\|3098669_3100610_+	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	1.9e-37	40.5
AZI04843.1\|3100549_3100732_+	hypothetical protein	NA	NA	NA	NA
AZI04844.1\|3100686_3100908_-	cold shock domain protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	1.3e-16	61.2
AZI04845.1\|3101233_3101551_+\|protease	ATP-dependent Clp protease adaptor ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	2.0e-13	45.7
AZI04846.1\|3101581_3103861_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	1.6e-165	42.0
AZI04847.1\|3103981_3104200_-	translation initiation factor IF-1	NA	NA	NA	NA
AZI04848.1\|3104553_3105255_-\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
AZI04849.1\|3105299_3107021_-	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	A0A2R8FG22	Brazilian_cedratvirus	1.5e-14	34.3

DBSCAN-SWA_6

3531216 : 3602713

uncultured_Caudovirales_phage(34.0%)

terminase,head,plate,protease,lysis,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZI05239.1\|3531216_3531978_+	3-oxoacyl-ACP reductase	Q06VL0	Trichoplusia_ni_ascovirus	2.4e-20	32.5
AZI05240.1\|3532194_3533727_+	HD domain-containing protein	A0A1B1ISR1	uncultured_Mediterranean_phage	1.1e-21	30.0
AZI05241.1\|3533925_3534474_-\|protease	protease	NA	NA	NA	NA
AZI05242.1\|3534670_3535852_+	DUF4102 domain-containing protein	A0A0M4QX09	Salmonella_phage	5.6e-202	84.2
AZI05243.1\|3535832_3536075_-	AlpA family transcriptional regulator	A0A0M4RTZ2	Salmonella_phage	2.2e-20	73.8
AZI05244.1\|3536253_3536733_-	hypothetical protein	NA	NA	NA	NA
AZI05245.1\|3536729_3536942_-	hypothetical protein	A0A286S2B6	Klebsiella_phage	3.4e-33	98.6
AZI05246.1\|3536938_3537163_-	hypothetical protein	A0A286S2B3	Klebsiella_phage	3.1e-29	89.2
AZI05247.1\|3537152_3537863_-	DNA-binding protein	A0A286S260	Klebsiella_phage	2.1e-111	88.3
AZI05248.1\|3537868_3538387_-	hypothetical protein	A0A286S1S7	Klebsiella_phage	1.7e-94	98.8
AZI05249.1\|3538491_3539319_-\|protease	serine protease	Q8W654	Enterobacteria_phage	5.5e-111	84.0
AZI05250.1\|3539315_3539510_-	hypothetical protein	NA	NA	NA	NA
AZI05251.1\|3539506_3539932_-	hypothetical protein	A0A286S1S2	Klebsiella_phage	3.5e-53	77.9
AZI05252.1\|3540118_3540373_-	hypothetical protein	A0A286SGR4	Klebsiella_phage	3.1e-41	97.6
AZI05253.1\|3540365_3540731_-	hypothetical protein	A0A286S1Q6	Klebsiella_phage	6.9e-58	99.2
AZI05254.1\|3540900_3541089_-	hypothetical protein	A0A286S1P8	Klebsiella_phage	4.6e-26	100.0
AZI05255.1\|3541081_3541396_-	hypothetical protein	A0A286S1T9	Klebsiella_phage	1.0e-49	100.0
AZI05256.1\|3541566_3542235_-	LexA family transcriptional repressor	A0A286S2B2	Klebsiella_phage	2.4e-125	99.5
AZI05257.1\|3542332_3542554_+	XRE family transcriptional regulator	A0A286S2C1	Klebsiella_phage	3.0e-32	100.0
AZI05258.1\|3542528_3542822_+	hypothetical protein	A0A286S2B5	Klebsiella_phage	2.8e-38	97.6
AZI05259.1\|3543130_3544789_+	helicase	A0A286N2P9	Klebsiella_phage	0.0e+00	96.0
AZI05260.1\|3544790_3545753_+	DNA primase	A0A286N2Q0	Klebsiella_phage	4.8e-183	99.4
AZI05261.1\|3545749_3546226_+	hypothetical protein	A0A286N2Q1	Klebsiella_phage	1.8e-90	100.0
AZI05262.1\|3546222_3547005_+	antitermination protein	F1C595	Cronobacter_phage	7.2e-113	76.8
AZI05263.1\|3547410_3547659_+\|lysis	lysis protein	NA	NA	NA	NA
AZI05264.1\|3547661_3548192_+	lysozyme	K7PLY1	Enterobacteria_phage	2.7e-79	77.1
AZI05265.1\|3548188_3548578_+	lipase chaperone	A0A192Y6H8	Salmonella_phage	9.4e-21	49.2
AZI05266.1\|3548812_3549133_+	negative regulator GrlR	NA	NA	NA	NA
AZI05267.1\|3549234_3549987_+	hypothetical protein	A0A077KBY7	Edwardsiella_phage	4.0e-12	66.0
AZI05268.1\|3549937_3551338_+\|terminase	PBSX family phage terminase large subunit	A0A077KAW0	Edwardsiella_phage	9.4e-188	69.0
AZI05269.1\|3551575_3553027_+	hypothetical protein	A0A0M4S6U1	Salmonella_phage	3.8e-192	68.8
AZI05270.1\|3553082_3553631_+	hypothetical protein	A0A0M4REK0	Salmonella_phage	3.0e-49	56.3
AZI05271.1\|3553682_3554885_+	DUF2213 domain-containing protein	A0A0M4R5A6	Salmonella_phage	2.6e-106	54.1
AZI05272.1\|3554888_3555383_+	hypothetical protein	A0A2H4JHM9	uncultured_Caudovirales_phage	4.2e-50	62.7
AZI05273.1\|3555394_3556336_+	DUF2184 domain-containing protein	A0A2H4J191	uncultured_Caudovirales_phage	1.7e-137	77.1
AZI05274.1\|3556375_3556657_+	hypothetical protein	NA	NA	NA	NA
AZI05275.1\|3556625_3557045_+	DUF4054 domain-containing protein	A0A0M5M3S2	Salmonella_phage	3.3e-40	60.7
AZI05276.1\|3557041_3557548_+	hypothetical protein	NA	NA	NA	NA
AZI05277.1\|3557547_3557934_+\|head,tail	head-tail adaptor	A0A2H4J1A4	uncultured_Caudovirales_phage	1.1e-48	78.2
AZI05278.1\|3558028_3558469_+	hypothetical protein	A0A2H4J1A0	uncultured_Caudovirales_phage	1.6e-40	51.7
AZI05279.1\|3558472_3559618_+	DUF3383 domain-containing protein	A0A2H4J8G4	uncultured_Caudovirales_phage	6.3e-166	76.9
AZI05280.1\|3559628_3560069_+	DUF3277 domain-containing protein	A0A0M5M1K6	Salmonella_phage	3.3e-62	80.1
AZI05281.1\|3560072_3560498_+	hypothetical protein	A0A2H4J2V6	uncultured_Caudovirales_phage	2.6e-40	63.4
AZI05282.1\|3560533_3560686_+	NTP pyrophosphohydrolase	A0A2H4J1A2	uncultured_Caudovirales_phage	7.6e-19	88.0
AZI05283.1\|3560675_3562679_+	lytic transglycosylase domain-containing protein	A0A2H4J9N7	uncultured_Caudovirales_phage	1.2e-247	63.6
AZI05284.1\|3562678_3563278_+	hypothetical protein	A0A2H4J1B3	uncultured_Caudovirales_phage	9.9e-54	57.6
AZI05285.1\|3563278_3563581_+	hypothetical protein	A0A2H4J495	uncultured_Caudovirales_phage	2.0e-26	55.2
AZI05286.1\|3563583_3564606_+	hypothetical protein	A0A2H4J1B2	uncultured_Caudovirales_phage	9.2e-100	54.2
AZI05287.1\|3564605_3564947_+	hypothetical protein	A0A2H4J1A5	uncultured_Caudovirales_phage	1.8e-23	46.6
AZI05288.1\|3564999_3565185_-	hypothetical protein	NA	NA	NA	NA
AZI05289.1\|3565221_3565788_+	hypothetical protein	NA	NA	NA	NA
AZI05290.1\|3565841_3566495_+	hypothetical protein	A0A2H4J8H6	uncultured_Caudovirales_phage	1.0e-59	63.5
AZI05291.1\|3566496_3566850_+	hypothetical protein	A0A2H4J629	uncultured_Caudovirales_phage	2.3e-50	80.3
AZI05292.1\|3566849_3568046_+	hypothetical protein	A0A0M4RD32	Salmonella_phage	3.9e-158	72.9
AZI05293.1\|3568042_3568816_+	DUF2612 domain-containing protein	A0A2H4J1A9	uncultured_Caudovirales_phage	2.8e-77	54.4
AZI05294.1\|3568815_3569682_+	hypothetical protein	A0A2H4IYR0	uncultured_Caudovirales_phage	1.9e-34	64.5
AZI05295.1\|3569681_3569879_+	hypothetical protein	NA	NA	NA	NA
AZI05296.1\|3572968_3573700_+	hypothetical protein	NA	NA	NA	NA
AZI05297.1\|3573696_3573906_+	hypothetical protein	NA	NA	NA	NA
AZI05298.1\|3574010_3574295_+	hypothetical protein	NA	NA	NA	NA
AZI05299.1\|3574517_3574766_-	damage-inducible protein DinI	S5MQI1	Escherichia_phage	1.4e-25	70.4
AZI05300.1\|3575611_3576103_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
AZI05301.1\|3576145_3577690_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
AZI07097.1\|3577702_3579043_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
AZI05302.1\|3579039_3579729_+	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
AZI05303.1\|3579725_3581432_+	OmpA family protein	NA	NA	NA	NA
AZI05304.1\|3581436_3581928_+	type VI secretion system tube protein Hcp	NA	NA	NA	NA
AZI05305.1\|3582192_3584847_+	type VI secretion system ATPase TssH	K4FB40	Cronobacter_phage	2.5e-96	33.4
AZI05306.1\|3584839_3587218_+	type VI secretion system tip protein VgrG	A0A2H4JCD4	uncultured_Caudovirales_phage	9.2e-18	33.8
AZI05307.1\|3587218_3587998_+	DUF4123 domain-containing protein	NA	NA	NA	NA
AZI05308.1\|3588061_3588592_+	DUF3304 domain-containing protein	NA	NA	NA	NA
AZI05309.1\|3588660_3589191_+	DUF3304 domain-containing protein	NA	NA	NA	NA
AZI05310.1\|3589857_3590388_+	DUF3304 domain-containing protein	NA	NA	NA	NA
AZI05311.1\|3590455_3590986_+	DUF3304 domain-containing protein	NA	NA	NA	NA
AZI05312.1\|3590973_3593391_+	DUF2235 domain-containing protein	NA	NA	NA	NA
AZI05313.1\|3593435_3593693_+	PAAR domain-containing protein	NA	NA	NA	NA
AZI05314.1\|3593689_3594829_+	hypothetical protein	NA	NA	NA	NA
AZI05315.1\|3594812_3598238_+	type VI secretion protein VasK	NA	NA	NA	NA
AZI05316.1\|3598237_3598645_+	type VI secretion protein	NA	NA	NA	NA
AZI05317.1\|3598696_3599830_+	type VI secretion system protein TssA	NA	NA	NA	NA
AZI05318.1\|3599909_3601664_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
AZI05319.1\|3601627_3602713_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA

DBSCAN-SWA_7

3796317 : 3807204

Escherichia_phage(87.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZI05500.1\|3796317_3796938_-	aldolase	A0A077SK32	Escherichia_phage	8.0e-115	100.0
AZI05501.1\|3796930_3798196_-	four-carbon acid sugar kinase family protein	A0A077SLJ7	Escherichia_phage	6.6e-233	99.5
AZI05502.1\|3798207_3799110_-	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	7.7e-159	99.3
AZI05503.1\|3799370_3800132_+	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	1.9e-134	100.0
AZI05504.1\|3800152_3801013_-	class A broad-spectrum beta-lactamase SHV-11	A0A077SL40	Escherichia_phage	2.2e-155	99.3
AZI05505.1\|3801310_3801571_+	hypothetical protein	A0A077SK33	Escherichia_phage	3.5e-40	97.7
AZI05506.1\|3801657_3802746_+	chromosome segregation protein SMC	A0A077SLJ9	Escherichia_phage	8.0e-211	100.0
AZI05507.1\|3802776_3804042_-	MFS transporter	NA	NA	NA	NA
AZI05508.1\|3804096_3807204_-	beta-galactosidase	L0N6M2	Herpes_simplex_virus	0.0e+00	59.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. CP027038

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 1184

Pseudomonas_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZI07369.1\|222_720_-	hypothetical protein	NA	NA	NA	NA
AZI07370.1\|722_1184_-	DUF1643 domain-containing protein	B5WZV8	Pseudomonas_phage	1.5e-46	60.5

DBSCAN-SWA_2

4813 : 10668

Sodalis_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZI07379.1\|4813_5086_-	HU family DNA-binding protein	A3E2K9	Sodalis_phage	4.2e-20	59.6
AZI07380.1\|5143_5671_-	nuclease	O64020	Bacillus_phage	1.3e-09	37.0
AZI07381.1\|5687_5876_-	hypothetical protein	NA	NA	NA	NA
AZI07382.1\|5901_6759_-	hypothetical protein	NA	NA	NA	NA
AZI07383.1\|6745_6976_-	hypothetical protein	NA	NA	NA	NA
AZI07384.1\|6975_7494_-	nitrite reductase	NA	NA	NA	NA
AZI07385.1\|7490_7937_-	Fe3+-siderophore ABC transporter permease	NA	NA	NA	NA
AZI07386.1\|7936_8296_-	hypothetical protein	A0A076G835	Escherichia_phage	5.6e-20	49.4
AZI07387.1\|8352_8781_-	hypothetical protein	NA	NA	NA	NA
AZI07388.1\|8814_9675_-	protein-disulfide isomerase	NA	NA	NA	NA
AZI07389.1\|9690_10668_-	S49 family peptidase	Q9JMP1	Wolbachia_phage	7.1e-17	31.5

DBSCAN-SWA_3

14309 : 15425

unidentified_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZI07395.1\|14309_15425_+	phosphohydrolase	H7BVI4	unidentified_phage	6.4e-46	29.1

DBSCAN-SWA_4

19337 : 23084

Bacillus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZI07400.1\|19337_20321_+	plasmid stability protein StbA	A7KUY1	Bacillus_phage	2.1e-08	24.4
AZI07401.1\|20337_20631_+	hypothetical protein	NA	NA	NA	NA
AZI07402.1\|20632_21052_+	DNA-binding protein	NA	NA	NA	NA
AZI07548.1\|21111_21663_-	regulator	NA	NA	NA	NA
AZI07403.1\|21659_22268_-	transcriptional regulator	NA	NA	NA	NA
AZI07404.1\|22278_22812_-	transglycosylase	NA	NA	NA	NA
AZI07405.1\|22811_23084_-	nucleotide excision repair protein	A0A2H4J3B6	uncultured_Caudovirales_phage	1.3e-08	41.0

DBSCAN-SWA_5

30412 : 31924

Pseudoalteromonas_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZI07410.1\|30412_31924_-	ATP-dependent helicase	A0A2D1GN12	Pseudoalteromonas_phage	3.6e-44	30.7

DBSCAN-SWA_6

35112 : 36997

Salmonella_phage(50.0%)

integrase

attL 33310:33325|attR 38240:38255

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
33310:33325	attL	NA	NA	NA	NA
AZI07415.1\|35112_35982_-	3'-5' exonuclease	A0A1S6L012	Salmonella_phage	3.5e-23	35.1
AZI07416.1\|35986_36997_-\|integrase	integrase	A0A0K0N6I5	Gordonia_phage	3.1e-07	31.9
38240:38255	attR	NA	NA	NA	NA

DBSCAN-SWA_7

40477 : 50510

uncultured_Caudovirales_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZI07424.1\|40477_44740_-	type IV secretion protein Rhs	A0A2H4JHK7	uncultured_Caudovirales_phage	5.8e-23	53.4
AZI07425.1\|44872_45598_-	hypothetical protein	NA	NA	NA	NA
AZI07426.1\|45711_46113_-	hypothetical protein	NA	NA	NA	NA
AZI07427.1\|46332_46572_-	permease	NA	NA	NA	NA
AZI07428.1\|46644_46923_-	hypothetical protein	NA	NA	NA	NA
AZI07549.1\|46909_48637_-	DNA primase	A0A0P0ZFY3	Escherichia_phage	9.9e-14	32.6
AZI07429.1\|48814_49201_-	hypothetical protein	NA	NA	NA	NA
AZI07430.1\|49658_50510_-	NgrC	A0A219UQS0	Bacillus_phage	3.6e-09	29.4

DBSCAN-SWA_8

57071 : 58697

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZI07440.1\|57071_58697_-	DNA cytosine methyltransferase	A0A0N9SK84	Staphylococcus_phage	1.2e-05	25.8

DBSCAN-SWA_9

67932 : 72568

Mycobacterium_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZI07455.1\|67932_68943_-	endonuclease	E0YQ48	Mycobacterium_phage	5.6e-09	28.7
AZI07456.1\|69005_69995_-	phage recombination protein Bet	B5AX97	Iodobacteriophage	1.1e-52	39.6
AZI07457.1\|70089_70620_-	single-stranded DNA-binding protein	A0A291LCB6	Klebsiella_phage	2.6e-42	71.8
AZI07458.1\|70680_71589_-	hypothetical protein	NA	NA	NA	NA
AZI07459.1\|71599_72568_-	CbbQ/NirQ/NorQ/GpvN family protein	L7TKP0	Rhizobium_phage	2.8e-29	32.6

DBSCAN-SWA_10

104719 : 153936

Burkholderia_phage(16.67%)

head,tail,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZI07489.1\|104719_106912_+	DNA topoisomerase 3	A0A1X9I6W8	Streptococcus_phage	1.7e-42	29.2
AZI07490.1\|106926_107415_+	hypothetical protein	NA	NA	NA	NA
AZI07491.1\|107506_107806_-	RNA-binding protein	A0A0K1LLW2	Caulobacter_phage	2.1e-20	55.4
AZI07492.1\|107810_108017_-	hypothetical protein	NA	NA	NA	NA
AZI07493.1\|108017_108635_-\|head,tail	phage head-tail adapter protein	NA	NA	NA	NA
AZI07494.1\|108728_108947_-	hypothetical protein	NA	NA	NA	NA
AZI07495.1\|109152_109809_-	hypothetical protein	NA	NA	NA	NA
AZI07496.1\|109808_111236_-	DNA cytosine methyltransferase	NA	NA	NA	NA
AZI07497.1\|111239_111740_-	hypothetical protein	I3UMJ0	Colwellia_phage	1.7e-19	43.3
AZI07498.1\|111748_112081_-	hypothetical protein	NA	NA	NA	NA
AZI07551.1\|112065_112497_-	hypothetical protein	NA	NA	NA	NA
AZI07499.1\|112564_113239_-	thymidylate kinase	NA	NA	NA	NA
AZI07500.1\|113213_113495_-	hypothetical protein	NA	NA	NA	NA
AZI07501.1\|113487_113865_-	hypothetical protein	A0A2H4P7P5	Pseudomonas_phage	2.2e-22	49.6
AZI07502.1\|114418_115054_+	restriction endonuclease subunit M	NA	NA	NA	NA
AZI07503.1\|115106_115379_-	hypothetical protein	NA	NA	NA	NA
AZI07504.1\|115427_116609_-	chromosome partitioning protein ParB	I3NLC2	Bifidobacterium_phage	2.4e-11	28.7
AZI07505.1\|116612_117398_-	ParA family protein	A0A1X9IGI7	Lactococcus_phage	6.1e-11	26.4
AZI07506.1\|117571_117883_-	hypothetical protein	NA	NA	NA	NA
AZI07507.1\|118189_119005_+	sulfonamide-resistant dihydropteroate synthase Sul2	A0A0B5J4J5	Pandoravirus	5.9e-09	27.6
AZI07508.1\|119065_119869_+	aminoglycoside O-phosphotransferase APH(3'')-Ib	NA	NA	NA	NA
AZI07509.1\|119868_120705_+	aminoglycoside O-phosphotransferase APH(6)-Id	NA	NA	NA	NA
AZI07510.1\|121010_121253_+	relaxase	NA	NA	NA	NA
AZI07511.1\|121284_121962_-	TetR family transcriptional regulator	NA	NA	NA	NA
AZI07512.1\|122040_123240_+	tetracycline efflux MFS transporter Tet(A)	NA	NA	NA	NA
AZI07513.1\|123605_123830_-	hypothetical protein	NA	NA	NA	NA
AZI07514.1\|123826_124564_-	resolvase	NA	NA	NA	NA
AZI07515.1\|124670_125162_+	hypothetical protein	NA	NA	NA	NA
AZI07516.1\|125195_125900_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AZI07517.1\|128581_129139_+	recombinase	Q1MVP4	Enterobacteria_phage	7.0e-94	100.0
AZI07518.1\|129321_130182_+	class A broad-spectrum beta-lactamase TEM-1	Q1MVP3	Enterobacteria_phage	4.6e-161	100.0
AZI07519.1\|130351_131107_+	16S rRNA (guanine(1405)-N(7))-methyltransferase RmtB1	NA	NA	NA	NA
AZI07520.1\|131187_131736_-	sodium:proton antiporter	NA	NA	NA	NA
AZI07521.1\|131851_133054_+\|transposase	ISL3 family transposase ISAeme19	A9YX10	Burkholderia_phage	1.0e-102	53.2
AZI07522.1\|133068_133461_+	molecular chaperone GroEL	A0A2I7SAK5	Vibrio_phage	8.5e-22	58.1
AZI07523.1\|133687_135220_+\|transposase	IS91 family transposase	NA	NA	NA	NA
AZI07524.1\|135311_136103_-	LysR family transcriptional regulator	NA	NA	NA	NA
AZI07525.1\|136123_137299_-	tetracycline efflux MFS transporter Tet(G)	NA	NA	NA	NA
AZI07526.1\|137402_138029_+	TetR family transcriptional regulator	NA	NA	NA	NA
AZI07527.1\|138025_138208_-	DUF3363 domain-containing protein	NA	NA	NA	NA
AZI07528.1\|138235_139450_-	chloramphenicol/florfenicol efflux MFS transporter FloR	S4TR35	Salmonella_phage	4.5e-21	26.1
AZI07529.1\|139666_140638_-	Sul1-delta/DUF3363 domain-containing fusion protein	NA	NA	NA	NA
AZI07530.1\|140631_140979_-	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
AZI07552.1\|141142_141934_-	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA1	NA	NA	NA	NA
AZI07531.1\|141950_142751_-	oxacillin-hydrolyzing class D beta-lactamase OXA-10	NA	NA	NA	NA
AZI07532.1\|143015_144275_-	chloramphenicol efflux MFS transporter CmlA5	S4TR35	Salmonella_phage	1.7e-26	31.7
AZI07533.1\|144595_145048_-	NAD(+)--rifampin ADP-ribosyltransferase Arr-2	NA	NA	NA	NA
AZI07534.1\|145132_145666_-	aminoglycoside nucleotidyltransferase ANT(2'')-Ia	NA	NA	NA	NA
AZI07535.1\|145810_146710_-	class A extended-spectrum beta-lactamase VEB-1	NA	NA	NA	NA
AZI07536.1\|146843_148094_+\|transposase	IS4-like element IS10A family transposase	Q9E8P4	Bluetongue_virus	4.2e-171	71.4
AZI07553.1\|148616_148940_+	hypothetical protein	NA	NA	NA	NA
AZI07554.1\|148995_149637_+	restriction endonuclease	NA	NA	NA	NA
AZI07537.1\|149641_149848_+	hypothetical protein	NA	NA	NA	NA
AZI07538.1\|150229_151663_+	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	7.0e-106	50.6
AZI07539.1\|151696_152905_-	restriction endonuclease	E5E3X4	Burkholderia_phage	1.2e-34	42.5
AZI07540.1\|152917_153130_-	resolvase	NA	NA	NA	NA
AZI07541.1\|153171_153936_-\|transposase	IS6 family transposase IS6100	A0A077SL39	Escherichia_phage	4.3e-86	65.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP027037

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. CP027036

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. CP027038

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection