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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP027050 Klebsiella pneumoniae strain 20_GR_12 plasmid IncN, complete sequence 0 crisprs NA 0 0 0 0
CP027051 Klebsiella pneumoniae strain 20_GR_12 plasmid IncX3, complete sequence 0 crisprs NA 0 0 4 0
CP027052 Klebsiella pneumoniae strain 20_GR_12 plasmid ColRNAI, complete sequence 0 crisprs NA 0 0 0 0
CP027049 Klebsiella pneumoniae strain 20_GR_12 plasmid unnamed, complete sequence 0 crisprs csa3,RT 0 0 1 0
CP027048 Klebsiella pneumoniae strain 20_GR_12 chromosome, complete genome 1 crisprs csa3,cas3,DEDDh,RT,DinG,WYL 0 0 9 0

Results visualization

1. CP027051
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 2435 4 Escherichia_phage(25.0%) NA NA
DBSCAN-SWA_2 7035 : 7551 1 Tupanvirus(100.0%) NA NA
DBSCAN-SWA_3 26182 : 30353 3 Moraxella_phage(33.33%) NA NA
DBSCAN-SWA_4 35517 : 42550 5 Escherichia_phage(75.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. CP027048
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP027048_1 4548243-4548337 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 446276 : 515654 75 uncultured_Caudovirales_phage(61.11%) tRNA,capsid,integrase,head,tail,portal,terminase,protease attL 463884:463901|attR 479879:479896
DBSCAN-SWA_2 1352972 : 1400022 61 Salmonella_phage(41.18%) capsid,tail,terminase,holin NA
DBSCAN-SWA_3 1728746 : 1735653 6 Planktothrix_phage(33.33%) NA NA
DBSCAN-SWA_4 2105804 : 2136396 29 Microcystis_virus(33.33%) plate,transposase NA
DBSCAN-SWA_5 2792847 : 2803735 10 Escherichia_phage(87.5%) NA NA
DBSCAN-SWA_6 2997764 : 3070567 83 uncultured_Caudovirales_phage(35.29%) plate,head,lysis,tail,transposase,terminase,protease NA
DBSCAN-SWA_7 3103500 : 3163617 73 Enterobacteria_phage(21.05%) integrase,tail,holin,transposase,terminase attL 3103282:3103297|attR 3160923:3160938
DBSCAN-SWA_8 3539911 : 3632862 97 Salmonella_phage(56.9%) plate,tRNA,head,capsid,integrase,tail,portal,protease attL 3595437:3595455|attR 3632937:3632955
DBSCAN-SWA_9 4283650 : 4295304 13 Enterobacteria_phage(70.0%) integrase attL 4284100:4284114|attR 4307157:4307171
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
3. CP027049
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 2198 : 36902 25 Escherichia_phage(28.57%) protease,transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage