CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	5 crisprs	cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,WYL,cas1,cas2,RT,cas14j,c2c8_V-U2,c2c9_V-U4,Cas14c_CAS-V-F,cas3	0	123	1	0
CP012375	Microcystis aeruginosa NIES-2481, complete genome	20 crisprs	cas14j,Cas14c_CAS-V-F,c2c9_V-U4,cas14k,csa3,RT,2OG_CAS,DinG,csm3gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cas2,cas1,cas4,cas6,cas3,cas5,cas7,cas8b5,WYL	1	33	1	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP025929_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP025929_1

587-2233

TypeIII

Consensus_repeat	Method
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	PILER-CR
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CRISPRCasFinder
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CRT

22 spacers

cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,WYL

The CRISPR arrays of CP025929_1

>merge|CP025929|1|587-2233|PILER-CR,CRISPRCasFinder,CRT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACCTTTTTTGCGGTATTTTTGGTTACTTTGTATCATTGTCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACAGATCCTTTAGGAGAATTTAACTCTAACGCTTGGGCCGCCTCCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACAAAAGAGTAACCGCTGTTTTTGCTTGCGTTCCGAATAACTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACGACTAGTTGTTCTGGGGCCCAAAAAGCCTTGGGGACTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACAATGCAACCGCGGCACCCAGGACTTTTGTGCCATCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACTTTTAAAGGGGGGGGGTGTTAGTCCCCTACGATGCATACCCCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACAAACCATCGCTTTGCCACACCAAACAAATCTTTCGATTATGCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACGTATGTACACGCCCTTGAGTGCTTGCTCGTTTTTACTTTGGGGACTCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACGCTTAATATCGTTCTCGGCTCCCTTCACTTGAATTGTAACTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACAAAAAAGTGAAAAACAACGCAAAACGCACTAAACTTTCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACATGGTAAATCGGGGACGCCATCAAATCCAGCGCCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACTCCCACGGTGGGGAGCATGGGCCCATCCCAGTTGCGGGTAACTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACTCACCCCTTGTGGTATGACAAAGTAAACGGTGGCATTTCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACACATTTCTGCATAGTGTCGAACGGCACAGTTTGCTGGGAACTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACAGTCCTTAAGGATAAGCTTCCAGCTCCATAGGAGACTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACGGTTAATAAAACCTACCAAAGTTTTGGGTAGGTCCTCCCCGGAGAGACTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACCTAGGAGCACAGCTGCTTCTGTTGTCTGCCGATTCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACATGAAGTGCCCCATCGCTTCTACTAACTCGGGCCTCTCTCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACGGTTAATCGTGAACCAAGCCACGAAACCCCGTGTGGTCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACCACGATTTCTATTGCTGGAGATTCTCTTAGAGGTTCCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACAGGATTTGGTCCTCGGGAAGTTTTACAGTGGTTCTTTTCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACAATGTACGGAACGGGCCTCAAGGGTTCTTCCGACTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACA

>CP025929|1|1|587-2232|PILER-CR
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CTTTTTTGCGGTATTTTTGGTTACTTTGTATCATTGT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	AGATCCTTTAGGAGAATTTAACTCTAACGCTTGGGCCGCCTC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	AAAAGAGTAACCGCTGTTTTTGCTTGCGTTCCGAATAA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GACTAGTTGTTCTGGGGCCCAAAAAGCCTTGGGGA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	AATGCAACCGCGGCACCCAGGACTTTTGTGCCAT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TTTTAAAGGGGGGGGGTGTTAGTCCCCTACGATGCATACCC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	AAACCATCGCTTTGCCACACCAAACAAATCTTTCGATTATG
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GTATGTACACGCCCTTGAGTGCTTGCTCGTTTTTACTTTGGGGACT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GCTTAATATCGTTCTCGGCTCCCTTCACTTGAATTGTAA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	AAAAAAGTGAAAAACAACGCAAAACGCACTAAACTTT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	ATGGTAAATCGGGGACGCCATCAAATCCAGCGC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TCCCACGGTGGGGAGCATGGGCCCATCCCAGTTGCGGGTAA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TCACCCCTTGTGGTATGACAAAGTAAACGGTGGCATTT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	ACATTTCTGCATAGTGTCGAACGGCACAGTTTGCTGGGAA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	AGTCCTTAAGGATAAGCTTCCAGCTCCATAGGAGA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GGTTAATAAAACCTACCAAAGTTTTGGGTAGGTCCTCCCCGGAGAGA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CTAGGAGCACAGCTGCTTCTGTTGTCTGCCGATT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	ATGAAGTGCCCCATCGCTTCTACTAACTCGGGCCTCTCT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GGTTAATCGTGAACCAAGCCACGAAACCCCGTGTGGT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CACGATTTCTATTGCTGGAGATTCTCTTAGAGGTTC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	AGGATTTGGTCCTCGGGAAGTTTTACAGTGGTTCTTTT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	AATGTACGGAACGGGCCTCAAGGGTTCTTCCGA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC

>CP025929|1|1|587-2233|CRISPRCasFinder
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CTTTTTTGCGGTATTTTTGGTTACTTTGTATCATTGT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	AGATCCTTTAGGAGAATTTAACTCTAACGCTTGGGCCGCCTC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	AAAAGAGTAACCGCTGTTTTTGCTTGCGTTCCGAATAA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GACTAGTTGTTCTGGGGCCCAAAAAGCCTTGGGGA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	AATGCAACCGCGGCACCCAGGACTTTTGTGCCAT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TTTTAAAGGGGGGGGGTGTTAGTCCCCTACGATGCATACCC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	AAACCATCGCTTTGCCACACCAAACAAATCTTTCGATTATG
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GTATGTACACGCCCTTGAGTGCTTGCTCGTTTTTACTTTGGGGACT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GCTTAATATCGTTCTCGGCTCCCTTCACTTGAATTGTAA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	AAAAAAGTGAAAAACAACGCAAAACGCACTAAACTTT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	ATGGTAAATCGGGGACGCCATCAAATCCAGCGC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TCCCACGGTGGGGAGCATGGGCCCATCCCAGTTGCGGGTAA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TCACCCCTTGTGGTATGACAAAGTAAACGGTGGCATTT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	ACATTTCTGCATAGTGTCGAACGGCACAGTTTGCTGGGAA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	AGTCCTTAAGGATAAGCTTCCAGCTCCATAGGAGA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GGTTAATAAAACCTACCAAAGTTTTGGGTAGGTCCTCCCCGGAGAGA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CTAGGAGCACAGCTGCTTCTGTTGTCTGCCGATT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	ATGAAGTGCCCCATCGCTTCTACTAACTCGGGCCTCTCT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GGTTAATCGTGAACCAAGCCACGAAACCCCGTGTGGT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CACGATTTCTATTGCTGGAGATTCTCTTAGAGGTTC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	AGGATTTGGTCCTCGGGAAGTTTTACAGTGGTTCTTTT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	AATGTACGGAACGGGCCTCAAGGGTTCTTCCGA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACA

>CP025929|1|1|587-2232|CRT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CTTTTTTGCGGTATTTTTGGTTACTTTGTATCATTGT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	AGATCCTTTAGGAGAATTTAACTCTAACGCTTGGGCCGCCTC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	AAAAGAGTAACCGCTGTTTTTGCTTGCGTTCCGAATAA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GACTAGTTGTTCTGGGGCCCAAAAAGCCTTGGGGA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	AATGCAACCGCGGCACCCAGGACTTTTGTGCCAT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TTTTAAAGGGGGGGGGTGTTAGTCCCCTACGATGCATACCC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	AAACCATCGCTTTGCCACACCAAACAAATCTTTCGATTATG
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GTATGTACACGCCCTTGAGTGCTTGCTCGTTTTTACTTTGGGGACT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GCTTAATATCGTTCTCGGCTCCCTTCACTTGAATTGTAA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	AAAAAAGTGAAAAACAACGCAAAACGCACTAAACTTT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	ATGGTAAATCGGGGACGCCATCAAATCCAGCGC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TCCCACGGTGGGGAGCATGGGCCCATCCCAGTTGCGGGTAA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TCACCCCTTGTGGTATGACAAAGTAAACGGTGGCATTT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	ACATTTCTGCATAGTGTCGAACGGCACAGTTTGCTGGGAA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	AGTCCTTAAGGATAAGCTTCCAGCTCCATAGGAGA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GGTTAATAAAACCTACCAAAGTTTTGGGTAGGTCCTCCCCGGAGAGA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CTAGGAGCACAGCTGCTTCTGTTGTCTGCCGATT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	ATGAAGTGCCCCATCGCTTCTACTAACTCGGGCCTCTCT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GGTTAATCGTGAACCAAGCCACGAAACCCCGTGTGGT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CACGATTTCTATTGCTGGAGATTCTCTTAGAGGTTC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	AGGATTTGGTCCTCGGGAAGTTTTACAGTGGTTCTTTT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	AATGTACGGAACGGGCCTCAAGGGTTCTTCCGA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC

Protein	Signature genes	Signature genes Name	Protein_function
CP025929.1\|AUS35817.1\|6151_7648_-\|IS5/IS1182-family-transposase	unknown	unknown	gnl\|CDD\|290319
CP025929.1\|AUS35815.1\|2560_3394_+\|IS5/IS1182-family-transposase	unknown	unknown	gnl\|CDD\|372577
CP025929.1\|AUS35822.1\|12124_13351_-\|CRISPR-associated-protein	cmr3gr5	pfam09700_cmr3gr5_CAS-III-B	gnl\|CDD\|187879
CP025929.1\|AUS35816.1\|4105_5254_+\|transposase	unknown	unknown	unknown
CP025929.1\|AUS35818.1\|7947_8850_+\|hypothetical-protein	unknown	unknown	unknown
CP025929.1\|AUS35819.1\|8935_10822_-\|CRISPR-associated-protein-Cmr6	cmr6gr7	COG1604_cmr6gr7_CAS-III-B	gnl\|CDD\|213662
CP025929.1\|AUS35824.1\|16679_18098_-\|TIGR03985-family-CRISPR-associated-protein	WYL	mkCas0075_WYL_CAS-I:CAS-III	gnl\|CDD\|274901
CP025929.1\|AUS35820.1\|10818_11214_-\|hypothetical-protein	cmr5gr11	cls000022_cmr5gr11_CAS-III-B	unknown
CP025929.1\|AUS35821.1\|11210_12128_-\|type-III-B-CRISPR-module-RAMP-protein-Cmr4	cmr4gr7	COG1336_cmr4gr7_CAS-III-C	gnl\|CDD\|274210
CP025929.1\|AUS35823.1\|13372_16375_-\|type-III-B-CRISPR-associated-protein-Cas10/Cmr2	cas10	cd09679_cas10_CAS-III	gnl\|CDD\|378863

Protein	Function_ID	Function_description	E-value
CP025929.1\|AUS35817.1\|6151_7648_-\|IS5/IS1182-family-transposase	gnl\|CDD\|290319	pfam13586, DDE_Tnp_1_2, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis.	2.0941e-34
CP025929.1\|AUS35815.1\|2560_3394_+\|IS5/IS1182-family-transposase	gnl\|CDD\|372577	pfam13359, DDE_Tnp_4, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	3.40929e-32
CP025929.1\|AUS35822.1\|12124_13351_-\|CRISPR-associated-protein	gnl\|CDD\|187879	cd09748, Cmr3_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; This protein is a subunit of Cmr complex.	1.96166e-37
CP025929.1\|AUS35819.1\|8935_10822_-\|CRISPR-associated-protein-Cmr6	gnl\|CDD\|213662	TIGR01898, repair_system, CRISPR type III-B/RAMP module RAMP protein Cmr6. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. This family, represented by TM1791 of Thermotoga maritima, is designated Cmr6 [sic], for CRISPR/Cas Ramp Module protein 6. This family is both closely related to and frequently encoded next to the TM1792 family of Cas proteins described by TIGR01867. The two proteins are fused in an example from Methanopyrus kandleri.	3.7043e-18
CP025929.1\|AUS35824.1\|16679_18098_-\|TIGR03985-family-CRISPR-associated-protein	gnl\|CDD\|274901	TIGR03985, hypothetical_protein_sll7078, CRISPR-associated protein, TIGR03985 family. Members of this protein family belong to CRISPR-associated (Cas) gene clusters. The majority of members are Cyanobacterial.	1.10585e-85
CP025929.1\|AUS35821.1\|11210_12128_-\|type-III-B-CRISPR-module-RAMP-protein-Cmr4	gnl\|CDD\|274210	TIGR02580, putative_CRISPR-associated_protein, CRISPR type III-B/RAMP module RAMP protein Cmr4. This model represents a CRISPR-associated protein from the family that includes TM1792 of Thermotoga maritima. This family is part of the broad RAMP superfamily (pfam03787) collection of CRISPR-associated proteins. It is the fourth of a recurring set of six proteins, four of are in the RAMP superfamily, that we designate the CRISPR RAMP module.	1.8118e-32
CP025929.1\|AUS35823.1\|13372_16375_-\|type-III-B-CRISPR-associated-protein-Cas10/Cmr2	gnl\|CDD\|378863	pfam12469, DUF3692, CRISPR-associated protein. This domain family is found in bacteria and archaea, and is typically between 101 and 138 amino acids in length. The proteins in this family are frequently annotated as CRISPR-associated proteins however there is little accompanying literature to confirm this.	2.05122e-37

>CP025929.1|AUS35815.1|2560_3394_+|IS5/IS1182-family-transposase
MLVYLRHHLSFQILGLMFQVSESTAHNIFTYWQKLFEGELPPSLLEQIKKCQEEEIIIEQLRNYELIVDSAEQPVERPTDYQEQKIYYSGKQRRHTLKSQFIVLPKAEDIVDVVIGQPGPTSDIKICRETLSKFDSQQTFIGDKAYLGENQIRTPDKKPKNGELTENQIKENKVLSSRRIFVEHLIRVVKVFKVVQERFRLNKSRYKSVLLTVCGLVRLRISALILEVIEWEQSGEVIDVIISHSFPSKFVLSLKTLINRFLELILTLGLICLSSLL
>CP025929.1|AUS35816.1|4105_5254_+|transposase
MISELYQKVLENELGRARYLLLLMIVGTLQILKQAKLEILAEALPIPILFESRRKKLKRFLKLEILNIEKIWFLCLKEMLKQQQRFTTKGLAYIAIDRTSWGAINILMVSLIYDKRAIPIYWEILDKKGSSNLEEQQRVLEKTLTVLSGHKIVVLGDREFCSVSLGKWLQKQSLYFCLRQKKSTNVKTKEGIYQEMRELGLSPGTQLFLNDVNITKEQGFGQFNLAGKWKKTYGGFQTKEPWYILTNFVDLETAIIAYQKRFDIEEMFRDFKSGGYSLEGSQLAPQYLSKLIIVIAIAYTSATLQGKKIKDMGIQKYVTRPEKRYKGQRRHSSFYVGQHLYHWLQLHQMFQKNIEELMQISRYRLKDYIKGQRAISLALSTF
>CP025929.1|AUS35817.1|6151_7648_-|IS5/IS1182-family-transposase
MYRKSELPSTPPENFELPFEGKLSQDNRWVIMANLIPWSEFEAEYASLFSEEMGTPAKTFRTALGALIIKEKLGTSDRETVEQIKENPYLQYFLGFSSYSNEPRFEASMLVHFRERITLELINKVNRFMVKNSREIKEEENTEKKLESETQSQPENRGKLILDASCAPADISYPTDLNLLNQGRKQTEKIIDILYETLKGKLVQKPRTYRLLARKSYLEVAKKRKPTVKQRRKALKRQLQYLKRNLDHIEQLLAEGASLQSLKKRDYKLLLVVTEVYRQQLWMYQNNKQSIEDRIVSLTQPHIRPIVRGKAGKPVEFGAKFSASCIDGYIFLDRISWDNFNESGDLKAQIEAYYDYTGYYPESVHVDKIYRTRENRAWCKERGIRISGPPLGRPAKNVSKEQKKQATDDERIRNCIEGKFGQGKRRFSLGKVMAKLPHTSFSAIAITFLVMNLSNLLRQVFWAFLCLKWKNSTFSRSMIRISYNLKINQQLKLMLVAK
>CP025929.1|AUS35818.1|7947_8850_+|hypothetical-protein
MKKFGGDANTPNAANLNRRFTLSNSSKLSLVLAEVDSVQFFTDAATGRSGISQSGLAALCGVTKQALSKLTKSLSTKCPSIWLKPIQGQVDDLSTRTETGILLYYDQLALAIIKHYAFSGREQAQLVLDKFALIGFNAWVQRMTGWQEPEKPTLNADPTCVLDLLEAHTRRSESLNRTIHTAIHQQINAIKDTLKVLEGRLESSETITIEAVKTTTPQKNEEITKVAVRRLKGEGSGSIHWRTYTKNGRQYRQAFFHYELWEGGDRLIKSCKYIPKEKVAAIQDLQTQKASIVEILRVLS
>CP025929.1|AUS35819.1|8935_10822_-|CRISPR-associated-protein-Cmr6
MTAQQEWQKFLEKLQKDKNPLYDLYKDSQLEIGTEITIYFSDEEAKKKASAKWQKLQAKFPPHWKNQKINFKVGQLAPSSITAMTRSTARTNNPTSRKLTSPLQTLNHRLFNNNDTAKPVLIEAAAADKTCQSLYQQLTEKTKRLADETLTVEFIWRLRVGGMRGFQELLLPVFHPVYGVPYIPSSSLKGVVRAWARQHRPEAEVNRLLGTLEDGIGCVQFLDAFPTAPCLTVDIANPQWSWENNRVCYQPVPHYLLSMEEPEILIGFTRTSRGKLEDVSKVKDWLQIALSAGIGSRVSAGYGRTSVASSLSHHSSHAFKLWTQGIYGANPPTKDNQYQGNNEFRPVAVRGTLRYWFRAVGLSIYSPQQCKDLEGRLFGTIEPQAQEGLIRISVDWEEEEGDRNRPYFCEGNILLEAKNQDALNLAEKLLQLSSHLAGIGRGSRRSLHWNNTIGLRGCHWEIDTKKLPRNQELWQQFLREVKDSLLALQSAIGDPANCTPGNPGNRSQDVLNSQAQIYLISCPSLKYPGTVNNWQNEGLGLKVRGKGLDFLYSSGFKGVNQEGNGNANVGGRISQRGETASTPSYVLIKSNFPPQQEPYQTVTIFGVNQRDRATFIQQLNSLNPMQIQ
>CP025929.1|AUS35820.1|10818_11214_-|hypothetical-protein
MKLDSRQFSKQAHNALVEIKSELAVTYHKKASGLVQGLSTYISTWGLHRLSGDMQKFLGGTAEDTRYKGKVYQKFLTKLKEFSGADFDVNDQGTLIHMPLRKYTALNHLAIKLAKEWSFWSPAVLGEAEQS
>CP025929.1|AUS35821.1|11210_12128_-|type-III-B-CRISPR-module-RAMP-protein-Cmr4
MNTYLTYLYLLTPLHTGGSADEGNLMGIAREVHTEFPYLPASSLRGKIRSALEPSNPQSEEEKALAKEVSQFFGQKIKDGQQPTEGEVWFAEATLLFFPIASLSHHLVWITCPLWLERWNRWLQKSPLTQLIQNCREQITEARPALVSFTPEPLYLQTAILQQNALGQLNTNDSNSISQSLQNLTNANGMINQLLKKLVIVDDEDCIALVETGLQREVRVALNEGEKTVKGGSFRSEEAIPPETVLFFPWGMKPVKQTENTQNIRAKTSELLKNKLQFGGLEGLGRGWCDLKTIETTETTTGSQK
>CP025929.1|AUS35822.1|12124_13351_-|CRISPR-associated-protein
MYWYAITPLDVLLFREAKPFSPGESAWAKGLFPPFPSTVFQALRSTLSKDVKDLDFMGPFLLSPQDRLCFSTPKDLVAVKWGLKTQKIDEETEEEEPKEDNLDDTASDWHRTLRLQPVDRTDEAWEHLLFDEAGLAPMVAPFRELVEEENRREFFCRPYPWITAEALSEYLQGKELTDPTQFQEDPWNVQIMPHIQMQADKRQVKDEDGYFTEVAIRLKPGWRLVAGISIDLRETVVRLGGEGHRAIVIPFTLSDADQTLLNPKTNTTGDFAYLLTPGLAVKEEAVYGVYPCDWQSILAGCVSDRPLLWGGVSQIRRKLVISCGKENQERTTSQISLGSSSPNSEAKGDEEFALLPQRAFVPPGTVYIFNQIPSETEALLPKPESTGNWLTSFQKLNYGKLLWGNTPL
>CP025929.1|AUS35823.1|13372_16375_-|type-III-B-CRISPR-associated-protein-Cas10/Cmr2
MIMPESESPINSRNFYCRKLCALLEDKSILQQLQSIHPEELQGQIEELPLQIASSSDRVNLGEAQGTNINSVKHPISGQTRNITSQDLRPEIPAEITSETDIEKLFWWFWRFYPELIRQNQNDFFLYPAHSILPDCPLHSYKSTVSALVGAMYPEHWQEGGKSQHLYLFLFTFSPVQEFIKASRKFVDFWAGSYLLHYLSVKLCWYIAETYGSDAVITPSLWSQEIIDALIVKKYPDFAANFASFQDGTSPVGRFDNGISTSLSTAGFPNVIMALVPGKEAARELGEKLKKCLIEEWSEIAKKVREDIKKRTLEFLKDTKNQQKIDEILLKEFLSEQEICKRDLKKWQIGHHGSCWEWNKLWEAQIEKTWETYWTAMPLGNPEQPLTINPTEENYQQWKQAQNAIAPPHLAESLPTTAEQNLYEQINTGTWWGALQARLGQSIQAVKNTRTWAIPTAPGDRSTLSGQFSAVHPQLHYHGQFKNGGGLSARSMRLFWRLMAEVYPGLFNGSEKLNAIELTKRMAWRYGGVAESLGINLGQEDDTNYDNLIRFPNLSSIAAARFTYEDFKKGGQKTRNYWNCLNTLINQQLPNKADTFASRTRGRPYQIPKVDRQINPENRNGQNFNGVMFSSKWLADDMNCNAQETATLRSLVEEAHKKAKFGEGSPADWWVIVLGDGDGMGKYVSGSKLKKYKEYLITDAIAENVKNHQDYPDLLATQKRMGPATHVGLNRALLDFSNRLVPYLTEERYCGKVVYSGGDDVMAVLPLADLLGYLRSLRAAWCADPDPEREFSTEGGYWTPKQTLQGLQQRPYFTMGDGATMSLGIVIAHKSVPLPTVLESLWTAEKDRAKKLYGKDGLCFRVIYGSGNTLEALMKGELLDLWWNFMQYDQQDLSALFYRLAEELPRHACVTESDRLLRKAAQVIINRRDQTLESHIQENLLNWLDQWENWAYQTYNQVNKNKTEKEVPLGTTEKDLANLLRFSAFWNDKRMQQMKWGETE
>CP025929.1|AUS35824.1|16679_18098_-|TIGR03985-family-CRISPR-associated-protein
MSLPTITTLEELVPELARLANYPKSDQKQIDNFLNLIQNAVRLWIIEQSFYDFNSDFFVEIDQEWFDCITWIDKLWTKIPNVQNKKLEDLLLGEYPLFYQQKWQEQIIARYQLSSENLQQILSSHIFKVTQRTLRNNFKRLAQLNQPKLIKSASLKGHYKKVVSSSLNSLDNCNLIKHNNDIITENNWLSFLNDGLSTIAELLTTKINGHQRFFIQAEYIVPEALQDKVADWADNLKEFWKQSLISPIKIKYYSASKNITNYYIIYPVSIHYSQRAYYLYAFGETPDQNSSQALQWYGYRLERILSLKQIAWDFSDLTKRLRSQIHKNDKINHLYSPDYIQEQLELAYGFSFYREFNTMLLRFDQNYYQRHVKNTIRHSTFQKIENIQEVKKMIIEQIDSEIDNTKKIQREKLLAKVNCASEDVYYKLCYRVGDHNVIMRLRSWGPNVEVILPSDLRAQIKEYLEKNYKLYQ

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Crispr_ID: CP025929_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP025929_2

3421-3965

TypeIII

Consensus_repeat	Method
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CRISPRCasFinder
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CRT
TTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	PILER-CR

7 spacers

cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,WYL

The CRISPR arrays of CP025929_2

>merge|CP025929|2|3421-3965|CRISPRCasFinder,CRT,PILER-CR
TTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACAGTCGGGGTCGGGTCGGAGGTAGCAAAGGGCTATCTTTTCCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACCTTTTGTTCACAGGTTTTGTGAATCCTTTTAGATCCCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACAAAATGTGCGGAGAAATGCACCAATAGTAGACGTCCCTGAATCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACGTAGGTTGCGTACAACCAAACGGAGCCCACATACTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACTTAGGAGACACAAAGACCAGTAGAAGATAGAGTATCACCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACGTGATCGAGGTGAGCGATCGAGTAACGGAGGTTCTGGTATGCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACGATAGCTCTCAATCCGGCGGGACGCCTCGAGATACTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACC

>CP025929|2|2|3421-3965|CRISPRCasFinder
TTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	AGTCGGGGTCGGGTCGGAGGTAGCAAAGGGCTATCTTTTC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CTTTTGTTCACAGGTTTTGTGAATCCTTTTAGATCC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	AAAATGTGCGGAGAAATGCACCAATAGTAGACGTCCCTGAAT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GTAGGTTGCGTACAACCAAACGGAGCCCACATA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TTAGGAGACACAAAGACCAGTAGAAGATAGAGTATCAC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GTGATCGAGGTGAGCGATCGAGTAACGGAGGTTCTGGTATG
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GATAGCTCTCAATCCGGCGGGACGCCTCGAGATA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACC

>CP025929|2|2|3421-3964|CRT
TTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	AGTCGGGGTCGGGTCGGAGGTAGCAAAGGGCTATCTTTTC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CTTTTGTTCACAGGTTTTGTGAATCCTTTTAGATCC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	AAAATGTGCGGAGAAATGCACCAATAGTAGACGTCCCTGAAT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GTAGGTTGCGTACAACCAAACGGAGCCCACATA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TTAGGAGACACAAAGACCAGTAGAAGATAGAGTATCAC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GTGATCGAGGTGAGCGATCGAGTAACGGAGGTTCTGGTATG
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GATAGCTCTCAATCCGGCGGGACGCCTCGAGATA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC

>CP025929|2|2|3422-3964|PILER-CR
TTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	AGTCGGGGTCGGGTCGGAGGTAGCAAAGGGCTATCTTTTCC
TTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CTTTTGTTCACAGGTTTTGTGAATCCTTTTAGATCCC
TTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	AAAATGTGCGGAGAAATGCACCAATAGTAGACGTCCCTGAATC
TTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GTAGGTTGCGTACAACCAAACGGAGCCCACATAC
TTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TTAGGAGACACAAAGACCAGTAGAAGATAGAGTATCACC
TTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GTGATCGAGGTGAGCGATCGAGTAACGGAGGTTCTGGTATGC
TTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GATAGCTCTCAATCCGGCGGGACGCCTCGAGATAC
TTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC

Protein	Signature genes	Signature genes Name	Protein_function
CP025929.1\|AUS35817.1\|6151_7648_-\|IS5/IS1182-family-transposase	unknown	unknown	gnl\|CDD\|290319
CP025929.1\|AUS35815.1\|2560_3394_+\|IS5/IS1182-family-transposase	unknown	unknown	gnl\|CDD\|372577
CP025929.1\|AUS35822.1\|12124_13351_-\|CRISPR-associated-protein	cmr3gr5	pfam09700_cmr3gr5_CAS-III-B	gnl\|CDD\|187879
CP025929.1\|AUS35816.1\|4105_5254_+\|transposase	unknown	unknown	unknown
CP025929.1\|AUS35818.1\|7947_8850_+\|hypothetical-protein	unknown	unknown	unknown
CP025929.1\|AUS35819.1\|8935_10822_-\|CRISPR-associated-protein-Cmr6	cmr6gr7	COG1604_cmr6gr7_CAS-III-B	gnl\|CDD\|213662
CP025929.1\|AUS35824.1\|16679_18098_-\|TIGR03985-family-CRISPR-associated-protein	WYL	mkCas0075_WYL_CAS-I:CAS-III	gnl\|CDD\|274901
CP025929.1\|AUS35820.1\|10818_11214_-\|hypothetical-protein	cmr5gr11	cls000022_cmr5gr11_CAS-III-B	unknown
CP025929.1\|AUS35825.1\|18176_19574_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|366360
CP025929.1\|AUS35821.1\|11210_12128_-\|type-III-B-CRISPR-module-RAMP-protein-Cmr4	cmr4gr7	COG1336_cmr4gr7_CAS-III-C	gnl\|CDD\|274210
CP025929.1\|AUS35823.1\|13372_16375_-\|type-III-B-CRISPR-associated-protein-Cas10/Cmr2	cas10	cd09679_cas10_CAS-III	gnl\|CDD\|378863

Protein	Function_ID	Function_description	E-value
CP025929.1\|AUS35817.1\|6151_7648_-\|IS5/IS1182-family-transposase	gnl\|CDD\|290319	pfam13586, DDE_Tnp_1_2, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis.	2.0941e-34
CP025929.1\|AUS35815.1\|2560_3394_+\|IS5/IS1182-family-transposase	gnl\|CDD\|372577	pfam13359, DDE_Tnp_4, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	3.40929e-32
CP025929.1\|AUS35822.1\|12124_13351_-\|CRISPR-associated-protein	gnl\|CDD\|187879	cd09748, Cmr3_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; This protein is a subunit of Cmr complex.	1.96166e-37
CP025929.1\|AUS35819.1\|8935_10822_-\|CRISPR-associated-protein-Cmr6	gnl\|CDD\|213662	TIGR01898, repair_system, CRISPR type III-B/RAMP module RAMP protein Cmr6. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. This family, represented by TM1791 of Thermotoga maritima, is designated Cmr6 [sic], for CRISPR/Cas Ramp Module protein 6. This family is both closely related to and frequently encoded next to the TM1792 family of Cas proteins described by TIGR01867. The two proteins are fused in an example from Methanopyrus kandleri.	3.7043e-18
CP025929.1\|AUS35824.1\|16679_18098_-\|TIGR03985-family-CRISPR-associated-protein	gnl\|CDD\|274901	TIGR03985, hypothetical_protein_sll7078, CRISPR-associated protein, TIGR03985 family. Members of this protein family belong to CRISPR-associated (Cas) gene clusters. The majority of members are Cyanobacterial.	1.10585e-85
CP025929.1\|AUS35825.1\|18176_19574_-\|hypothetical-protein	gnl\|CDD\|366360	pfam00899, ThiF, ThiF family. This domain is found in ubiquitin activating E1 family and members of the bacterial ThiF/MoeB/HesA family. It is repeated in Ubiquitin-activating enzyme E1.	4.54173e-23
CP025929.1\|AUS35821.1\|11210_12128_-\|type-III-B-CRISPR-module-RAMP-protein-Cmr4	gnl\|CDD\|274210	TIGR02580, putative_CRISPR-associated_protein, CRISPR type III-B/RAMP module RAMP protein Cmr4. This model represents a CRISPR-associated protein from the family that includes TM1792 of Thermotoga maritima. This family is part of the broad RAMP superfamily (pfam03787) collection of CRISPR-associated proteins. It is the fourth of a recurring set of six proteins, four of are in the RAMP superfamily, that we designate the CRISPR RAMP module.	1.8118e-32
CP025929.1\|AUS35823.1\|13372_16375_-\|type-III-B-CRISPR-associated-protein-Cas10/Cmr2	gnl\|CDD\|378863	pfam12469, DUF3692, CRISPR-associated protein. This domain family is found in bacteria and archaea, and is typically between 101 and 138 amino acids in length. The proteins in this family are frequently annotated as CRISPR-associated proteins however there is little accompanying literature to confirm this.	2.05122e-37

>CP025929.1|AUS35815.1|2560_3394_+|IS5/IS1182-family-transposase
MLVYLRHHLSFQILGLMFQVSESTAHNIFTYWQKLFEGELPPSLLEQIKKCQEEEIIIEQLRNYELIVDSAEQPVERPTDYQEQKIYYSGKQRRHTLKSQFIVLPKAEDIVDVVIGQPGPTSDIKICRETLSKFDSQQTFIGDKAYLGENQIRTPDKKPKNGELTENQIKENKVLSSRRIFVEHLIRVVKVFKVVQERFRLNKSRYKSVLLTVCGLVRLRISALILEVIEWEQSGEVIDVIISHSFPSKFVLSLKTLINRFLELILTLGLICLSSLL
>CP025929.1|AUS35816.1|4105_5254_+|transposase
MISELYQKVLENELGRARYLLLLMIVGTLQILKQAKLEILAEALPIPILFESRRKKLKRFLKLEILNIEKIWFLCLKEMLKQQQRFTTKGLAYIAIDRTSWGAINILMVSLIYDKRAIPIYWEILDKKGSSNLEEQQRVLEKTLTVLSGHKIVVLGDREFCSVSLGKWLQKQSLYFCLRQKKSTNVKTKEGIYQEMRELGLSPGTQLFLNDVNITKEQGFGQFNLAGKWKKTYGGFQTKEPWYILTNFVDLETAIIAYQKRFDIEEMFRDFKSGGYSLEGSQLAPQYLSKLIIVIAIAYTSATLQGKKIKDMGIQKYVTRPEKRYKGQRRHSSFYVGQHLYHWLQLHQMFQKNIEELMQISRYRLKDYIKGQRAISLALSTF
>CP025929.1|AUS35817.1|6151_7648_-|IS5/IS1182-family-transposase
MYRKSELPSTPPENFELPFEGKLSQDNRWVIMANLIPWSEFEAEYASLFSEEMGTPAKTFRTALGALIIKEKLGTSDRETVEQIKENPYLQYFLGFSSYSNEPRFEASMLVHFRERITLELINKVNRFMVKNSREIKEEENTEKKLESETQSQPENRGKLILDASCAPADISYPTDLNLLNQGRKQTEKIIDILYETLKGKLVQKPRTYRLLARKSYLEVAKKRKPTVKQRRKALKRQLQYLKRNLDHIEQLLAEGASLQSLKKRDYKLLLVVTEVYRQQLWMYQNNKQSIEDRIVSLTQPHIRPIVRGKAGKPVEFGAKFSASCIDGYIFLDRISWDNFNESGDLKAQIEAYYDYTGYYPESVHVDKIYRTRENRAWCKERGIRISGPPLGRPAKNVSKEQKKQATDDERIRNCIEGKFGQGKRRFSLGKVMAKLPHTSFSAIAITFLVMNLSNLLRQVFWAFLCLKWKNSTFSRSMIRISYNLKINQQLKLMLVAK
>CP025929.1|AUS35818.1|7947_8850_+|hypothetical-protein
MKKFGGDANTPNAANLNRRFTLSNSSKLSLVLAEVDSVQFFTDAATGRSGISQSGLAALCGVTKQALSKLTKSLSTKCPSIWLKPIQGQVDDLSTRTETGILLYYDQLALAIIKHYAFSGREQAQLVLDKFALIGFNAWVQRMTGWQEPEKPTLNADPTCVLDLLEAHTRRSESLNRTIHTAIHQQINAIKDTLKVLEGRLESSETITIEAVKTTTPQKNEEITKVAVRRLKGEGSGSIHWRTYTKNGRQYRQAFFHYELWEGGDRLIKSCKYIPKEKVAAIQDLQTQKASIVEILRVLS
>CP025929.1|AUS35819.1|8935_10822_-|CRISPR-associated-protein-Cmr6
MTAQQEWQKFLEKLQKDKNPLYDLYKDSQLEIGTEITIYFSDEEAKKKASAKWQKLQAKFPPHWKNQKINFKVGQLAPSSITAMTRSTARTNNPTSRKLTSPLQTLNHRLFNNNDTAKPVLIEAAAADKTCQSLYQQLTEKTKRLADETLTVEFIWRLRVGGMRGFQELLLPVFHPVYGVPYIPSSSLKGVVRAWARQHRPEAEVNRLLGTLEDGIGCVQFLDAFPTAPCLTVDIANPQWSWENNRVCYQPVPHYLLSMEEPEILIGFTRTSRGKLEDVSKVKDWLQIALSAGIGSRVSAGYGRTSVASSLSHHSSHAFKLWTQGIYGANPPTKDNQYQGNNEFRPVAVRGTLRYWFRAVGLSIYSPQQCKDLEGRLFGTIEPQAQEGLIRISVDWEEEEGDRNRPYFCEGNILLEAKNQDALNLAEKLLQLSSHLAGIGRGSRRSLHWNNTIGLRGCHWEIDTKKLPRNQELWQQFLREVKDSLLALQSAIGDPANCTPGNPGNRSQDVLNSQAQIYLISCPSLKYPGTVNNWQNEGLGLKVRGKGLDFLYSSGFKGVNQEGNGNANVGGRISQRGETASTPSYVLIKSNFPPQQEPYQTVTIFGVNQRDRATFIQQLNSLNPMQIQ
>CP025929.1|AUS35820.1|10818_11214_-|hypothetical-protein
MKLDSRQFSKQAHNALVEIKSELAVTYHKKASGLVQGLSTYISTWGLHRLSGDMQKFLGGTAEDTRYKGKVYQKFLTKLKEFSGADFDVNDQGTLIHMPLRKYTALNHLAIKLAKEWSFWSPAVLGEAEQS
>CP025929.1|AUS35821.1|11210_12128_-|type-III-B-CRISPR-module-RAMP-protein-Cmr4
MNTYLTYLYLLTPLHTGGSADEGNLMGIAREVHTEFPYLPASSLRGKIRSALEPSNPQSEEEKALAKEVSQFFGQKIKDGQQPTEGEVWFAEATLLFFPIASLSHHLVWITCPLWLERWNRWLQKSPLTQLIQNCREQITEARPALVSFTPEPLYLQTAILQQNALGQLNTNDSNSISQSLQNLTNANGMINQLLKKLVIVDDEDCIALVETGLQREVRVALNEGEKTVKGGSFRSEEAIPPETVLFFPWGMKPVKQTENTQNIRAKTSELLKNKLQFGGLEGLGRGWCDLKTIETTETTTGSQK
>CP025929.1|AUS35822.1|12124_13351_-|CRISPR-associated-protein
MYWYAITPLDVLLFREAKPFSPGESAWAKGLFPPFPSTVFQALRSTLSKDVKDLDFMGPFLLSPQDRLCFSTPKDLVAVKWGLKTQKIDEETEEEEPKEDNLDDTASDWHRTLRLQPVDRTDEAWEHLLFDEAGLAPMVAPFRELVEEENRREFFCRPYPWITAEALSEYLQGKELTDPTQFQEDPWNVQIMPHIQMQADKRQVKDEDGYFTEVAIRLKPGWRLVAGISIDLRETVVRLGGEGHRAIVIPFTLSDADQTLLNPKTNTTGDFAYLLTPGLAVKEEAVYGVYPCDWQSILAGCVSDRPLLWGGVSQIRRKLVISCGKENQERTTSQISLGSSSPNSEAKGDEEFALLPQRAFVPPGTVYIFNQIPSETEALLPKPESTGNWLTSFQKLNYGKLLWGNTPL
>CP025929.1|AUS35823.1|13372_16375_-|type-III-B-CRISPR-associated-protein-Cas10/Cmr2
MIMPESESPINSRNFYCRKLCALLEDKSILQQLQSIHPEELQGQIEELPLQIASSSDRVNLGEAQGTNINSVKHPISGQTRNITSQDLRPEIPAEITSETDIEKLFWWFWRFYPELIRQNQNDFFLYPAHSILPDCPLHSYKSTVSALVGAMYPEHWQEGGKSQHLYLFLFTFSPVQEFIKASRKFVDFWAGSYLLHYLSVKLCWYIAETYGSDAVITPSLWSQEIIDALIVKKYPDFAANFASFQDGTSPVGRFDNGISTSLSTAGFPNVIMALVPGKEAARELGEKLKKCLIEEWSEIAKKVREDIKKRTLEFLKDTKNQQKIDEILLKEFLSEQEICKRDLKKWQIGHHGSCWEWNKLWEAQIEKTWETYWTAMPLGNPEQPLTINPTEENYQQWKQAQNAIAPPHLAESLPTTAEQNLYEQINTGTWWGALQARLGQSIQAVKNTRTWAIPTAPGDRSTLSGQFSAVHPQLHYHGQFKNGGGLSARSMRLFWRLMAEVYPGLFNGSEKLNAIELTKRMAWRYGGVAESLGINLGQEDDTNYDNLIRFPNLSSIAAARFTYEDFKKGGQKTRNYWNCLNTLINQQLPNKADTFASRTRGRPYQIPKVDRQINPENRNGQNFNGVMFSSKWLADDMNCNAQETATLRSLVEEAHKKAKFGEGSPADWWVIVLGDGDGMGKYVSGSKLKKYKEYLITDAIAENVKNHQDYPDLLATQKRMGPATHVGLNRALLDFSNRLVPYLTEERYCGKVVYSGGDDVMAVLPLADLLGYLRSLRAAWCADPDPEREFSTEGGYWTPKQTLQGLQQRPYFTMGDGATMSLGIVIAHKSVPLPTVLESLWTAEKDRAKKLYGKDGLCFRVIYGSGNTLEALMKGELLDLWWNFMQYDQQDLSALFYRLAEELPRHACVTESDRLLRKAAQVIINRRDQTLESHIQENLLNWLDQWENWAYQTYNQVNKNKTEKEVPLGTTEKDLANLLRFSAFWNDKRMQQMKWGETE
>CP025929.1|AUS35824.1|16679_18098_-|TIGR03985-family-CRISPR-associated-protein
MSLPTITTLEELVPELARLANYPKSDQKQIDNFLNLIQNAVRLWIIEQSFYDFNSDFFVEIDQEWFDCITWIDKLWTKIPNVQNKKLEDLLLGEYPLFYQQKWQEQIIARYQLSSENLQQILSSHIFKVTQRTLRNNFKRLAQLNQPKLIKSASLKGHYKKVVSSSLNSLDNCNLIKHNNDIITENNWLSFLNDGLSTIAELLTTKINGHQRFFIQAEYIVPEALQDKVADWADNLKEFWKQSLISPIKIKYYSASKNITNYYIIYPVSIHYSQRAYYLYAFGETPDQNSSQALQWYGYRLERILSLKQIAWDFSDLTKRLRSQIHKNDKINHLYSPDYIQEQLELAYGFSFYREFNTMLLRFDQNYYQRHVKNTIRHSTFQKIENIQEVKKMIIEQIDSEIDNTKKIQREKLLAKVNCASEDVYYKLCYRVGDHNVIMRLRSWGPNVEVILPSDLRAQIKEYLEKNYKLYQ
>CP025929.1|AUS35825.1|18176_19574_-|hypothetical-protein
MNTQPKPQDILLHISPLMWKQFRQAMLDARQHREEVIGFFFCQRHQLSKKKVRYIPQAWVVPTADCYEHQSASGLVLKQQFHQYLLDTYLCALSKSSSSSKTRKLDVVHIHTHFGDATPSFSCVDDRYEAEYAKFLASCYQEKPRLISGVFNESLEKSKFRIWNRQGTNHTSIEFCRSWLTPINSNFSGEDTELIFARQKVFGETVQKHLNQLKVALIGCGGIGAVFAEQLARLGVKNWVFIDHDRLETVNLNRMPAATQEMVDQGWYKVHYLKWLIKRTYAIGSHVKALSLSVEDEKAKAEIATADLIVVATDNHRSRQVAQELALEYARPLVCLGTHIEVKPHHQPRLYCRVTVPPLGGGWCLMCGNIINLQQAALESAPTEIAAIASEAGYLQGIDAPAVYWLNNICASTGVGVIHGIISGFLPIDSGLDWIYDFPNSNWLKANIDHLQSSDCYFCSSLCTL

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Click the colored protein region to show detailed information

Crispr_ID: CP025929_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP025929_3

5285-6109

TypeIII

Consensus_repeat	Method
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	PILER-CR
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CRISPRCasFinder
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CRT

11 spacers

cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,WYL

The CRISPR arrays of CP025929_3

>merge|CP025929|3|5285-6109|PILER-CR,CRISPRCasFinder,CRT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACTTGCCTTGGCTTCATCTTCCGACAAATCCATGCACTCTTGCATGGATTCTTTTAACTTCTTAGCAAGTTTAATTAATAGAAACAAAATTGTACTCATCACTTGATGACAGAACTCAACCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACTGGATGCTCAATCGCCCATACCTGACCTGCTGACAGCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACCTTCTGCAAAACGGAGAACGATATAGTCATCGTCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACTACAAAGGGAGAATTGTCTCACTTTTTCTTTTATTTCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACGTTTAGTTTCCACTAAATCCGATGCATCTTCGACATCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACCTTTTGGGGCCCAAAAGGCCTTGGGGAAGATAGCCCCCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACGATACTCCACAATAAAGGTGTTGAGATATGATTTCTCCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACAATATAGGTAACGCTTCCATACCCATATTCCATACTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACGTCTAATGCTCCGATACCGATTTTCTGCACACTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACGTTTGCACACGCAACCAAAACAAAAACCCAAAACAGAAGACACTTTTAACTTCTTAGCAAGTTTAATTAGGGTTTGC

>CP025929|3|3|5285-6032|PILER-CR
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TTGCCTTGGCTTCATCTTCCGACAAATCCATGCACTCTTGCATGGATT
CTTTTAACTTCTTAGCAAGTTTAATTAATAGAAAC	AAAATTGTACTCATCACTTGATGACAGAACTCAAC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TGGATGCTCAATCGCCCATACCTGACCTGCTGACAG
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CTTCTGCAAAACGGAGAACGATATAGTCATCGT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TACAAAGGGAGAATTGTCTCACTTTTTCTTTTATTT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GTTTAGTTTCCACTAAATCCGATGCATCTTCGACAT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CTTTTGGGGCCCAAAAGGCCTTGGGGAAGATAGCCCC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GATACTCCACAATAAAGGTGTTGAGATATGATTTCTC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	AATATAGGTAACGCTTCCATACCCATATTCCATA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GTCTAATGCTCCGATACCGATTTTCTGCACA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC

>CP025929|3|3|5285-6109|CRISPRCasFinder
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TTGCCTTGGCTTCATCTTCCGACAAATCCATGCACTCTTGCATGGATT
CTTTTAACTTCTTAGCAAGTTTAATTAATAGAAAC	AAAATTGTACTCATCACTTGATGACAGAACTCAAC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TGGATGCTCAATCGCCCATACCTGACCTGCTGACAG
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CTTCTGCAAAACGGAGAACGATATAGTCATCGT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TACAAAGGGAGAATTGTCTCACTTTTTCTTTTATTT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GTTTAGTTTCCACTAAATCCGATGCATCTTCGACAT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CTTTTGGGGCCCAAAAGGCCTTGGGGAAGATAGCCCC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GATACTCCACAATAAAGGTGTTGAGATATGATTTCTC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	AATATAGGTAACGCTTCCATACCCATATTCCATA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GTCTAATGCTCCGATACCGATTTTCTGCACA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GTTTGCACACGCAACCAAAACAAAAACCCAAAACAGAAGACA
CTTTTAACTTCTTAGCAAGTTTAATTAGGGTTTGC

>CP025929|3|3|5285-6109|CRT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TTGCCTTGGCTTCATCTTCCGACAAATCCATGCACTCTTGCATGGATT
CTTTTAACTTCTTAGCAAGTTTAATTAATAGAAAC	AAAATTGTACTCATCACTTGATGACAGAACTCAAC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TGGATGCTCAATCGCCCATACCTGACCTGCTGACAG
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CTTCTGCAAAACGGAGAACGATATAGTCATCGT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TACAAAGGGAGAATTGTCTCACTTTTTCTTTTATTT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GTTTAGTTTCCACTAAATCCGATGCATCTTCGACAT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CTTTTGGGGCCCAAAAGGCCTTGGGGAAGATAGCCCC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GATACTCCACAATAAAGGTGTTGAGATATGATTTCTC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	AATATAGGTAACGCTTCCATACCCATATTCCATA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GTCTAATGCTCCGATACCGATTTTCTGCACA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GTTTGCACACGCAACCAAAACAAAAACCCAAAACAGAAGACA
CTTTTAACTTCTTAGCAAGTTTAATTAGGGTTTGC

Protein	Signature genes	Signature genes Name	Protein_function
CP025929.1\|AUS35815.1\|2560_3394_+\|IS5/IS1182-family-transposase	unknown	unknown	gnl\|CDD\|372577
CP025929.1\|AUS35816.1\|4105_5254_+\|transposase	unknown	unknown	unknown
CP025929.1\|AUS35818.1\|7947_8850_+\|hypothetical-protein	unknown	unknown	unknown
CP025929.1\|AUS35819.1\|8935_10822_-\|CRISPR-associated-protein-Cmr6	cmr6gr7	COG1604_cmr6gr7_CAS-III-B	gnl\|CDD\|213662
CP025929.1\|AUS35820.1\|10818_11214_-\|hypothetical-protein	cmr5gr11	cls000022_cmr5gr11_CAS-III-B	unknown
CP025929.1\|AUS35821.1\|11210_12128_-\|type-III-B-CRISPR-module-RAMP-protein-Cmr4	cmr4gr7	COG1336_cmr4gr7_CAS-III-C	gnl\|CDD\|274210
CP025929.1\|AUS35825.1\|18176_19574_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|366360
CP025929.1\|AUS35817.1\|6151_7648_-\|IS5/IS1182-family-transposase	unknown	unknown	gnl\|CDD\|290319
CP025929.1\|AUS35822.1\|12124_13351_-\|CRISPR-associated-protein	cmr3gr5	pfam09700_cmr3gr5_CAS-III-B	gnl\|CDD\|187879
CP025929.1\|AUS35823.1\|13372_16375_-\|type-III-B-CRISPR-associated-protein-Cas10/Cmr2	cas10	cd09679_cas10_CAS-III	gnl\|CDD\|378863
CP025929.1\|AUS35824.1\|16679_18098_-\|TIGR03985-family-CRISPR-associated-protein	WYL	mkCas0075_WYL_CAS-I:CAS-III	gnl\|CDD\|274901
CP025929.1\|AUS35826.1\|19694_20177_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|373079

Protein	Function_ID	Function_description	E-value
CP025929.1\|AUS35817.1\|6151_7648_-\|IS5/IS1182-family-transposase	gnl\|CDD\|290319	pfam13586, DDE_Tnp_1_2, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis.	2.0941e-34
CP025929.1\|AUS35815.1\|2560_3394_+\|IS5/IS1182-family-transposase	gnl\|CDD\|372577	pfam13359, DDE_Tnp_4, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	3.40929e-32
CP025929.1\|AUS35822.1\|12124_13351_-\|CRISPR-associated-protein	gnl\|CDD\|187879	cd09748, Cmr3_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; This protein is a subunit of Cmr complex.	1.96166e-37
CP025929.1\|AUS35819.1\|8935_10822_-\|CRISPR-associated-protein-Cmr6	gnl\|CDD\|213662	TIGR01898, repair_system, CRISPR type III-B/RAMP module RAMP protein Cmr6. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. This family, represented by TM1791 of Thermotoga maritima, is designated Cmr6 [sic], for CRISPR/Cas Ramp Module protein 6. This family is both closely related to and frequently encoded next to the TM1792 family of Cas proteins described by TIGR01867. The two proteins are fused in an example from Methanopyrus kandleri.	3.7043e-18
CP025929.1\|AUS35824.1\|16679_18098_-\|TIGR03985-family-CRISPR-associated-protein	gnl\|CDD\|274901	TIGR03985, hypothetical_protein_sll7078, CRISPR-associated protein, TIGR03985 family. Members of this protein family belong to CRISPR-associated (Cas) gene clusters. The majority of members are Cyanobacterial.	1.10585e-85
CP025929.1\|AUS35825.1\|18176_19574_-\|hypothetical-protein	gnl\|CDD\|366360	pfam00899, ThiF, ThiF family. This domain is found in ubiquitin activating E1 family and members of the bacterial ThiF/MoeB/HesA family. It is repeated in Ubiquitin-activating enzyme E1.	4.54173e-23
CP025929.1\|AUS35826.1\|19694_20177_-\|hypothetical-protein	gnl\|CDD\|373079	pfam14462, Prok-E2_E, Prokaryotic E2 family E. A member of the E2/UBC superfamily of proteins found in diverse bacteria. Analysis of the active site residues suggest that members of this family are inactive as they lack the characteristic catalytic residues of the E2 enzymes. They are usually fused to or in the neighborhood of a multi/poly ubiquitin domain protein. Other proteins of the ubiquitin modification pathway such as the E1 and JAB proteins are also found in its gene neighborhood along with a distinct predicted metal-binding protein.	0.00146895
CP025929.1\|AUS35821.1\|11210_12128_-\|type-III-B-CRISPR-module-RAMP-protein-Cmr4	gnl\|CDD\|274210	TIGR02580, putative_CRISPR-associated_protein, CRISPR type III-B/RAMP module RAMP protein Cmr4. This model represents a CRISPR-associated protein from the family that includes TM1792 of Thermotoga maritima. This family is part of the broad RAMP superfamily (pfam03787) collection of CRISPR-associated proteins. It is the fourth of a recurring set of six proteins, four of are in the RAMP superfamily, that we designate the CRISPR RAMP module.	1.8118e-32
CP025929.1\|AUS35823.1\|13372_16375_-\|type-III-B-CRISPR-associated-protein-Cas10/Cmr2	gnl\|CDD\|378863	pfam12469, DUF3692, CRISPR-associated protein. This domain family is found in bacteria and archaea, and is typically between 101 and 138 amino acids in length. The proteins in this family are frequently annotated as CRISPR-associated proteins however there is little accompanying literature to confirm this.	2.05122e-37

>CP025929.1|AUS35816.1|4105_5254_+|transposase
MISELYQKVLENELGRARYLLLLMIVGTLQILKQAKLEILAEALPIPILFESRRKKLKRFLKLEILNIEKIWFLCLKEMLKQQQRFTTKGLAYIAIDRTSWGAINILMVSLIYDKRAIPIYWEILDKKGSSNLEEQQRVLEKTLTVLSGHKIVVLGDREFCSVSLGKWLQKQSLYFCLRQKKSTNVKTKEGIYQEMRELGLSPGTQLFLNDVNITKEQGFGQFNLAGKWKKTYGGFQTKEPWYILTNFVDLETAIIAYQKRFDIEEMFRDFKSGGYSLEGSQLAPQYLSKLIIVIAIAYTSATLQGKKIKDMGIQKYVTRPEKRYKGQRRHSSFYVGQHLYHWLQLHQMFQKNIEELMQISRYRLKDYIKGQRAISLALSTF
>CP025929.1|AUS35815.1|2560_3394_+|IS5/IS1182-family-transposase
MLVYLRHHLSFQILGLMFQVSESTAHNIFTYWQKLFEGELPPSLLEQIKKCQEEEIIIEQLRNYELIVDSAEQPVERPTDYQEQKIYYSGKQRRHTLKSQFIVLPKAEDIVDVVIGQPGPTSDIKICRETLSKFDSQQTFIGDKAYLGENQIRTPDKKPKNGELTENQIKENKVLSSRRIFVEHLIRVVKVFKVVQERFRLNKSRYKSVLLTVCGLVRLRISALILEVIEWEQSGEVIDVIISHSFPSKFVLSLKTLINRFLELILTLGLICLSSLL
>CP025929.1|AUS35817.1|6151_7648_-|IS5/IS1182-family-transposase
MYRKSELPSTPPENFELPFEGKLSQDNRWVIMANLIPWSEFEAEYASLFSEEMGTPAKTFRTALGALIIKEKLGTSDRETVEQIKENPYLQYFLGFSSYSNEPRFEASMLVHFRERITLELINKVNRFMVKNSREIKEEENTEKKLESETQSQPENRGKLILDASCAPADISYPTDLNLLNQGRKQTEKIIDILYETLKGKLVQKPRTYRLLARKSYLEVAKKRKPTVKQRRKALKRQLQYLKRNLDHIEQLLAEGASLQSLKKRDYKLLLVVTEVYRQQLWMYQNNKQSIEDRIVSLTQPHIRPIVRGKAGKPVEFGAKFSASCIDGYIFLDRISWDNFNESGDLKAQIEAYYDYTGYYPESVHVDKIYRTRENRAWCKERGIRISGPPLGRPAKNVSKEQKKQATDDERIRNCIEGKFGQGKRRFSLGKVMAKLPHTSFSAIAITFLVMNLSNLLRQVFWAFLCLKWKNSTFSRSMIRISYNLKINQQLKLMLVAK
>CP025929.1|AUS35818.1|7947_8850_+|hypothetical-protein
MKKFGGDANTPNAANLNRRFTLSNSSKLSLVLAEVDSVQFFTDAATGRSGISQSGLAALCGVTKQALSKLTKSLSTKCPSIWLKPIQGQVDDLSTRTETGILLYYDQLALAIIKHYAFSGREQAQLVLDKFALIGFNAWVQRMTGWQEPEKPTLNADPTCVLDLLEAHTRRSESLNRTIHTAIHQQINAIKDTLKVLEGRLESSETITIEAVKTTTPQKNEEITKVAVRRLKGEGSGSIHWRTYTKNGRQYRQAFFHYELWEGGDRLIKSCKYIPKEKVAAIQDLQTQKASIVEILRVLS
>CP025929.1|AUS35819.1|8935_10822_-|CRISPR-associated-protein-Cmr6
MTAQQEWQKFLEKLQKDKNPLYDLYKDSQLEIGTEITIYFSDEEAKKKASAKWQKLQAKFPPHWKNQKINFKVGQLAPSSITAMTRSTARTNNPTSRKLTSPLQTLNHRLFNNNDTAKPVLIEAAAADKTCQSLYQQLTEKTKRLADETLTVEFIWRLRVGGMRGFQELLLPVFHPVYGVPYIPSSSLKGVVRAWARQHRPEAEVNRLLGTLEDGIGCVQFLDAFPTAPCLTVDIANPQWSWENNRVCYQPVPHYLLSMEEPEILIGFTRTSRGKLEDVSKVKDWLQIALSAGIGSRVSAGYGRTSVASSLSHHSSHAFKLWTQGIYGANPPTKDNQYQGNNEFRPVAVRGTLRYWFRAVGLSIYSPQQCKDLEGRLFGTIEPQAQEGLIRISVDWEEEEGDRNRPYFCEGNILLEAKNQDALNLAEKLLQLSSHLAGIGRGSRRSLHWNNTIGLRGCHWEIDTKKLPRNQELWQQFLREVKDSLLALQSAIGDPANCTPGNPGNRSQDVLNSQAQIYLISCPSLKYPGTVNNWQNEGLGLKVRGKGLDFLYSSGFKGVNQEGNGNANVGGRISQRGETASTPSYVLIKSNFPPQQEPYQTVTIFGVNQRDRATFIQQLNSLNPMQIQ
>CP025929.1|AUS35820.1|10818_11214_-|hypothetical-protein
MKLDSRQFSKQAHNALVEIKSELAVTYHKKASGLVQGLSTYISTWGLHRLSGDMQKFLGGTAEDTRYKGKVYQKFLTKLKEFSGADFDVNDQGTLIHMPLRKYTALNHLAIKLAKEWSFWSPAVLGEAEQS
>CP025929.1|AUS35821.1|11210_12128_-|type-III-B-CRISPR-module-RAMP-protein-Cmr4
MNTYLTYLYLLTPLHTGGSADEGNLMGIAREVHTEFPYLPASSLRGKIRSALEPSNPQSEEEKALAKEVSQFFGQKIKDGQQPTEGEVWFAEATLLFFPIASLSHHLVWITCPLWLERWNRWLQKSPLTQLIQNCREQITEARPALVSFTPEPLYLQTAILQQNALGQLNTNDSNSISQSLQNLTNANGMINQLLKKLVIVDDEDCIALVETGLQREVRVALNEGEKTVKGGSFRSEEAIPPETVLFFPWGMKPVKQTENTQNIRAKTSELLKNKLQFGGLEGLGRGWCDLKTIETTETTTGSQK
>CP025929.1|AUS35822.1|12124_13351_-|CRISPR-associated-protein
MYWYAITPLDVLLFREAKPFSPGESAWAKGLFPPFPSTVFQALRSTLSKDVKDLDFMGPFLLSPQDRLCFSTPKDLVAVKWGLKTQKIDEETEEEEPKEDNLDDTASDWHRTLRLQPVDRTDEAWEHLLFDEAGLAPMVAPFRELVEEENRREFFCRPYPWITAEALSEYLQGKELTDPTQFQEDPWNVQIMPHIQMQADKRQVKDEDGYFTEVAIRLKPGWRLVAGISIDLRETVVRLGGEGHRAIVIPFTLSDADQTLLNPKTNTTGDFAYLLTPGLAVKEEAVYGVYPCDWQSILAGCVSDRPLLWGGVSQIRRKLVISCGKENQERTTSQISLGSSSPNSEAKGDEEFALLPQRAFVPPGTVYIFNQIPSETEALLPKPESTGNWLTSFQKLNYGKLLWGNTPL
>CP025929.1|AUS35823.1|13372_16375_-|type-III-B-CRISPR-associated-protein-Cas10/Cmr2
MIMPESESPINSRNFYCRKLCALLEDKSILQQLQSIHPEELQGQIEELPLQIASSSDRVNLGEAQGTNINSVKHPISGQTRNITSQDLRPEIPAEITSETDIEKLFWWFWRFYPELIRQNQNDFFLYPAHSILPDCPLHSYKSTVSALVGAMYPEHWQEGGKSQHLYLFLFTFSPVQEFIKASRKFVDFWAGSYLLHYLSVKLCWYIAETYGSDAVITPSLWSQEIIDALIVKKYPDFAANFASFQDGTSPVGRFDNGISTSLSTAGFPNVIMALVPGKEAARELGEKLKKCLIEEWSEIAKKVREDIKKRTLEFLKDTKNQQKIDEILLKEFLSEQEICKRDLKKWQIGHHGSCWEWNKLWEAQIEKTWETYWTAMPLGNPEQPLTINPTEENYQQWKQAQNAIAPPHLAESLPTTAEQNLYEQINTGTWWGALQARLGQSIQAVKNTRTWAIPTAPGDRSTLSGQFSAVHPQLHYHGQFKNGGGLSARSMRLFWRLMAEVYPGLFNGSEKLNAIELTKRMAWRYGGVAESLGINLGQEDDTNYDNLIRFPNLSSIAAARFTYEDFKKGGQKTRNYWNCLNTLINQQLPNKADTFASRTRGRPYQIPKVDRQINPENRNGQNFNGVMFSSKWLADDMNCNAQETATLRSLVEEAHKKAKFGEGSPADWWVIVLGDGDGMGKYVSGSKLKKYKEYLITDAIAENVKNHQDYPDLLATQKRMGPATHVGLNRALLDFSNRLVPYLTEERYCGKVVYSGGDDVMAVLPLADLLGYLRSLRAAWCADPDPEREFSTEGGYWTPKQTLQGLQQRPYFTMGDGATMSLGIVIAHKSVPLPTVLESLWTAEKDRAKKLYGKDGLCFRVIYGSGNTLEALMKGELLDLWWNFMQYDQQDLSALFYRLAEELPRHACVTESDRLLRKAAQVIINRRDQTLESHIQENLLNWLDQWENWAYQTYNQVNKNKTEKEVPLGTTEKDLANLLRFSAFWNDKRMQQMKWGETE
>CP025929.1|AUS35824.1|16679_18098_-|TIGR03985-family-CRISPR-associated-protein
MSLPTITTLEELVPELARLANYPKSDQKQIDNFLNLIQNAVRLWIIEQSFYDFNSDFFVEIDQEWFDCITWIDKLWTKIPNVQNKKLEDLLLGEYPLFYQQKWQEQIIARYQLSSENLQQILSSHIFKVTQRTLRNNFKRLAQLNQPKLIKSASLKGHYKKVVSSSLNSLDNCNLIKHNNDIITENNWLSFLNDGLSTIAELLTTKINGHQRFFIQAEYIVPEALQDKVADWADNLKEFWKQSLISPIKIKYYSASKNITNYYIIYPVSIHYSQRAYYLYAFGETPDQNSSQALQWYGYRLERILSLKQIAWDFSDLTKRLRSQIHKNDKINHLYSPDYIQEQLELAYGFSFYREFNTMLLRFDQNYYQRHVKNTIRHSTFQKIENIQEVKKMIIEQIDSEIDNTKKIQREKLLAKVNCASEDVYYKLCYRVGDHNVIMRLRSWGPNVEVILPSDLRAQIKEYLEKNYKLYQ
>CP025929.1|AUS35825.1|18176_19574_-|hypothetical-protein
MNTQPKPQDILLHISPLMWKQFRQAMLDARQHREEVIGFFFCQRHQLSKKKVRYIPQAWVVPTADCYEHQSASGLVLKQQFHQYLLDTYLCALSKSSSSSKTRKLDVVHIHTHFGDATPSFSCVDDRYEAEYAKFLASCYQEKPRLISGVFNESLEKSKFRIWNRQGTNHTSIEFCRSWLTPINSNFSGEDTELIFARQKVFGETVQKHLNQLKVALIGCGGIGAVFAEQLARLGVKNWVFIDHDRLETVNLNRMPAATQEMVDQGWYKVHYLKWLIKRTYAIGSHVKALSLSVEDEKAKAEIATADLIVVATDNHRSRQVAQELALEYARPLVCLGTHIEVKPHHQPRLYCRVTVPPLGGGWCLMCGNIINLQQAALESAPTEIAAIASEAGYLQGIDAPAVYWLNNICASTGVGVIHGIISGFLPIDSGLDWIYDFPNSNWLKANIDHLQSSDCYFCSSLCTL
>CP025929.1|AUS35826.1|19694_20177_-|hypothetical-protein
MTITISSNATKFTLNTRLSAELKLLDKVAKTIVVGSKTIGDVQYTAILIKRMPLSSSKFKVSNSDVLFLLPPDYPRLPPIGCYLNYPWDTVGEGDHHFTRQSYYGAPFLSEEGWYWYCVGLGGGFNRDKWLNSWRPSNNPERGHNLVTLFITARHAINNV

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Crispr_ID: CP025929_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP025929_4

23191-27047

TypeIII

Consensus_repeat	Method
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	PILER-CR
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CRISPRCasFinder
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CRT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	PILER-CR

52 spacers

cas1,WYL,cas10,cmr3gr5,cmr4gr7,cas2,RT

The CRISPR arrays of CP025929_4

>merge|CP025929|4|23191-27047|PILER-CR,CRISPRCasFinder,CRT,PILER-CR
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACTTACATTTTGGGCGGGGCGAGTATAATCATCAAACCGCTCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACGCTCCTCTGGATACAGAGGAGTAAGCCAGCGTAGTCGGCTTCCTTCTGTCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACCATTTTGGTTGGTTTTAAAGAGCTCCAGCTCATCCCTTCTCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACTGCCGCCGTCGGGCTGCTCCTTGATGTTAAACACGGGTCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACGTCTCCATGTTGTCCATTGTGAAATTTTTTCCCATACAGCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACTTTTTCCATTCCCCTTCGGGATCGGGATCGGGATCGGGATCCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACGACAGCGAGGTTTTTCCAACTTGAAAAATAAAAAACCCCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACTGGGTTAGAATTTCCTCGACGCCCGGTGACGTGAGGAAATCAACTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACCTTTTTTTATCATACTTTGATTCTACTACTTGGTATCCAATTCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACCCGGAGGGCCGGGGGGTTAGGGTTTTACTCTGCTGTATCTTTTCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACTTCTAAACTACGCTTGGCAAGGCTTTTTGAGCACCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACCTGTGCTTTTTTAAGCACAAACAACCAAATTGTCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACGTTTTTTGGCGGCGTTGTATCTTCCCATAGAAGCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACCACGAGCCCACCAAACGGTGAATCTGTGCAGTGGTTCTTAAAACTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACGGTTGTATCGCACAGAACTCACTATTCTTTGCTACCGTGCCATCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACGATTGGAGGTTCGCTCCTTTCAATTCTTCCACTAAAACTCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACGAAGTCGTCTACCCAGAACATGAAACCGAAACATACTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACATCCCATCCTTCGCCATCGACCAATCTTTCGATAAAGGCTAACTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACCCTCACAAGGGGGTGGAGAAGAGGGGGCGGGGATAAGACTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACTTTGCTCCCCTGTACACGAAGGGTTACTTTCCCCGGAAACTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACGTTATGATTTCTCCTGTTTGTGTTTTGTTTTACTGATAACCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACGAGGGATACTATTATTTCCACTTTTGGCACTTCGGCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACACTGTTTTGGATGCCTTCAGTTCCCGTCATGGTGTCGACATAACTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACTTTGTCGGGAGCAGTACCCCCAGGGAGCTCTTCGTCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACCATCCCAGTTGCGGGTAACGGCGCTCTCCTTAAAGGAGACTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACTGTTTCCAACCAATTTTGCTGATTTTGGGCTGAGTTCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACCCAAGCCGTAAAGTCCAAAATCCAGGACAACAGCCGTCGTCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACGCTGGGGAGGGTAGAACGCTAACTTGTTGTCGCACAAGAACTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACGCTAAAGTCACCAAGAAAATGAAGGGACTCCTTCTCGTCATTTCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACAAAAGACTATTCCTGCTATTATGACGCCTACTATGCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACGAGAACAAAAACAGACAACGGCATTTTTTTCATGCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACCTGTGGAATTGTCCCAGATATCCCCACTTAAGCGAGGCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACACAACGAAATAGATTCTTTCTATTTCGTCTTTGATAGTTCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACTGAGTAAAAGCCACCGCCAACGCTCGATTAATGCGACTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACTGTCATTTACTGTGAGTTCTGGTCCCGGATAGTTGACCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACGAAAAACCATTACTGCCGCTACTGGCAAGAGGCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACCCCTGGTAGGCTTTACCCGTGATCCAGGTTTCCAAAATGGAACCCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACCAACAAAATTCCCTTTGTCGCCCAAGCTGCAGTCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACGTGAAAAACCGCGAGTTCTAAGGCATCCTTATCTCCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACCGTGACCTCTTGTTCAAGCACTACACATTGAATTGAATCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACTCAGTAATGGCCGTGTATTCTAGATATTCCTCTAGACCATCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACTCGTTTTTTACTACCAAGGCGAACCCTGCGAAGTTTAGCACTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACCGTGCGTACGATTTGCACAACTTAAACTTACCGCCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACAGTAGCAGCAGCAGTTAAACCGATGGTGGTATAGATTTCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACGGATACACCGTGGTGCATCCTATGCGTTTCCTACGTGATCCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACTTCCGCGTATCGCGTTTTGGACACATATAGTCCATTCAACTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACACCACACCAACTTCCCCGTCAAGGAAAGCATTTGTGGAGCCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACACCGGAAGGGTCAGTGACAGCGTGTGTTTCTCAGGCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACTAAGGTATGGGTGGACTATCAAAAAAATCAATTGAATTCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACACGATACGAGAAGGGATTGGGATGCTGGCAAGGACAGCCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACATGGGCCTCCCCATACGGTCAGAATGATGGCGGCTGCAAACTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACGTCAAAACACTGTACACCTTTCCAAACTTTGGATACCACTTTTAACTTCTTAGCAAGTTTAATTAATGTGAAG

>CP025929|4|4|23191-24056|PILER-CR
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TTACATTTTGGGCGGGGCGAGTATAATCATCAAACCGCT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GCTCCTCTGGATACAGAGGAGTAAGCCAGCGTAGTCGGCTTCCTTCTGT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CATTTTGGTTGGTTTTAAAGAGCTCCAGCTCATCCCTTCT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TGCCGCCGTCGGGCTGCTCCTTGATGTTAAACACGGGT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GTCTCCATGTTGTCCATTGTGAAATTTTTTCCCATACAG
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TTTTTCCATTCCCCTTCGGGATCGGGATCGGGATCGGGATC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GACAGCGAGGTTTTTCCAACTTGAAAAATAAAAAACCC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TGGGTTAGAATTTCCTCGACGCCCGGTGACGTGAGGAAATCAA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CTTTTTTTATCATACTTTGATTCTACTACTTGGTATCCAATT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CCGGAGGGCCGGGGGGTTAGGGTTTTACTCTGCTGTATCTTTT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TTCTAAACTACGCTTGGCAAGGCTTTTTGAGCAC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACCTGTGCTTTTTTAAGCACAAACAACCAAATTGTCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACGTTTTTTGGCGGCGTTGTATCTTCCCATAGAAGCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CACGAGCCCACCAAACGGTGAATCTGTGCAGTGGTTCTTAAAA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GGTTGTATCGCACAGAACTCACTATTCTTTGCTACCGTGCCAT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GATTGGAGGTTCGCTCCTTTCAATTCTTCCACTAAAACT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GAAGTCGTCTACCCAGAACATGAAACCGAAACATA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	ATCCCATCCTTCGCCATCGACCAATCTTTCGATAAAGGCTAA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CCTCACAAGGGGGTGGAGAAGAGGGGGCGGGGATAAGA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TTTGCTCCCCTGTACACGAAGGGTTACTTTCCCCGGAAA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GTTATGATTTCTCCTGTTTGTGTTTTGTTTTACTGATAAC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GAGGGATACTATTATTTCCACTTTTGGCACTTCGG
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	ACTGTTTTGGATGCCTTCAGTTCCCGTCATGGTGTCGACATAA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TTTGTCGGGAGCAGTACCCCCAGGGAGCTCTTCGT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CATCCCAGTTGCGGGTAACGGCGCTCTCCTTAAAGGAGA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TGTTTCCAACCAATTTTGCTGATTTTGGGCTGAGTT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CCAAGCCGTAAAGTCCAAAATCCAGGACAACAGCCGTCGT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GCTGGGGAGGGTAGAACGCTAACTTGTTGTCGCACAAGAA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GCTAAAGTCACCAAGAAAATGAAGGGACTCCTTCTCGTCATTT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	AAAAGACTATTCCTGCTATTATGACGCCTACTATG
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GAGAACAAAAACAGACAACGGCATTTTTTTCATG
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CTGTGGAATTGTCCCAGATATCCCCACTTAAGCGAGG
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	ACAACGAAATAGATTCTTTCTATTTCGTCTTTGATAGTT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TGAGTAAAAGCCACCGCCAACGCTCGATTAATGCGA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TGTCATTTACTGTGAGTTCTGGTCCCGGATAGTTGAC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GAAAAACCATTACTGCCGCTACTGGCAAGAGG
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CCCTGGTAGGCTTTACCCGTGATCCAGGTTTCCAAAATGGAACC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CAACAAAATTCCCTTTGTCGCCCAAGCTGCAGT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GTGAAAAACCGCGAGTTCTAAGGCATCCTTATCTC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CGTGACCTCTTGTTCAAGCACTACACATTGAATTGAAT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TCAGTAATGGCCGTGTATTCTAGATATTCCTCTAGACCAT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TCGTTTTTTACTACCAAGGCGAACCCTGCGAAGTTTAGCA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CGTGCGTACGATTTGCACAACTTAAACTTACCGC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	AGTAGCAGCAGCAGTTAAACCGATGGTGGTATAGATTT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GGATACACCGTGGTGCATCCTATGCGTTTCCTACGTGATC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TTCCGCGTATCGCGTTTTGGACACATATAGTCCATTCAA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	ACCACACCAACTTCCCCGTCAAGGAAAGCATTTGTGGAGC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	ACCGGAAGGGTCAGTGACAGCGTGTGTTTCTCAGG
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TAAGGTATGGGTGGACTATCAAAAAAATCAATTGAATT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	ACGATACGAGAAGGGATTGGGATGCTGGCAAGGACAGC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	ATGGGCCTCCCCATACGGTCAGAATGATGGCGGCTGCAAA


>CP025929|4|4|23191-27047|CRISPRCasFinder
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TTACATTTTGGGCGGGGCGAGTATAATCATCAAACCGCT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GCTCCTCTGGATACAGAGGAGTAAGCCAGCGTAGTCGGCTTCCTTCTGT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CATTTTGGTTGGTTTTAAAGAGCTCCAGCTCATCCCTTCT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TGCCGCCGTCGGGCTGCTCCTTGATGTTAAACACGGGT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GTCTCCATGTTGTCCATTGTGAAATTTTTTCCCATACAG
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TTTTTCCATTCCCCTTCGGGATCGGGATCGGGATCGGGATC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GACAGCGAGGTTTTTCCAACTTGAAAAATAAAAAACCC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TGGGTTAGAATTTCCTCGACGCCCGGTGACGTGAGGAAATCAA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CTTTTTTTATCATACTTTGATTCTACTACTTGGTATCCAATT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CCGGAGGGCCGGGGGGTTAGGGTTTTACTCTGCTGTATCTTTT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TTCTAAACTACGCTTGGCAAGGCTTTTTGAGCAC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CTGTGCTTTTTTAAGCACAAACAACCAAATTGT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GTTTTTTGGCGGCGTTGTATCTTCCCATAGAAG
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CACGAGCCCACCAAACGGTGAATCTGTGCAGTGGTTCTTAAAA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GGTTGTATCGCACAGAACTCACTATTCTTTGCTACCGTGCCAT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GATTGGAGGTTCGCTCCTTTCAATTCTTCCACTAAAACT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GAAGTCGTCTACCCAGAACATGAAACCGAAACATA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	ATCCCATCCTTCGCCATCGACCAATCTTTCGATAAAGGCTAA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CCTCACAAGGGGGTGGAGAAGAGGGGGCGGGGATAAGA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TTTGCTCCCCTGTACACGAAGGGTTACTTTCCCCGGAAA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GTTATGATTTCTCCTGTTTGTGTTTTGTTTTACTGATAAC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GAGGGATACTATTATTTCCACTTTTGGCACTTCGG
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	ACTGTTTTGGATGCCTTCAGTTCCCGTCATGGTGTCGACATAA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TTTGTCGGGAGCAGTACCCCCAGGGAGCTCTTCGT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CATCCCAGTTGCGGGTAACGGCGCTCTCCTTAAAGGAGA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TGTTTCCAACCAATTTTGCTGATTTTGGGCTGAGTT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CCAAGCCGTAAAGTCCAAAATCCAGGACAACAGCCGTCGT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GCTGGGGAGGGTAGAACGCTAACTTGTTGTCGCACAAGAA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GCTAAAGTCACCAAGAAAATGAAGGGACTCCTTCTCGTCATTT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	AAAAGACTATTCCTGCTATTATGACGCCTACTATG
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GAGAACAAAAACAGACAACGGCATTTTTTTCATG
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CTGTGGAATTGTCCCAGATATCCCCACTTAAGCGAGG
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	ACAACGAAATAGATTCTTTCTATTTCGTCTTTGATAGTT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TGAGTAAAAGCCACCGCCAACGCTCGATTAATGCGA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TGTCATTTACTGTGAGTTCTGGTCCCGGATAGTTGAC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GAAAAACCATTACTGCCGCTACTGGCAAGAGG
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CCCTGGTAGGCTTTACCCGTGATCCAGGTTTCCAAAATGGAACC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CAACAAAATTCCCTTTGTCGCCCAAGCTGCAGT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GTGAAAAACCGCGAGTTCTAAGGCATCCTTATCTC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CGTGACCTCTTGTTCAAGCACTACACATTGAATTGAAT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TCAGTAATGGCCGTGTATTCTAGATATTCCTCTAGACCAT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TCGTTTTTTACTACCAAGGCGAACCCTGCGAAGTTTAGCA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CGTGCGTACGATTTGCACAACTTAAACTTACCGC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	AGTAGCAGCAGCAGTTAAACCGATGGTGGTATAGATTT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GGATACACCGTGGTGCATCCTATGCGTTTCCTACGTGATC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TTCCGCGTATCGCGTTTTGGACACATATAGTCCATTCAA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	ACCACACCAACTTCCCCGTCAAGGAAAGCATTTGTGGAGC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	ACCGGAAGGGTCAGTGACAGCGTGTGTTTCTCAGG
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TAAGGTATGGGTGGACTATCAAAAAAATCAATTGAATT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	ACGATACGAGAAGGGATTGGGATGCTGGCAAGGACAGC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	ATGGGCCTCCCCATACGGTCAGAATGATGGCGGCTGCAAA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GTCAAAACACTGTACACCTTTCCAAACTTTGGATACCA
CTTTTAACTTCTTAGCAAGTTTAATTAATGTGAAG

>CP025929|4|4|23191-27047|CRT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TTACATTTTGGGCGGGGCGAGTATAATCATCAAACCGCT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GCTCCTCTGGATACAGAGGAGTAAGCCAGCGTAGTCGGCTTCCTTCTGT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CATTTTGGTTGGTTTTAAAGAGCTCCAGCTCATCCCTTCT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TGCCGCCGTCGGGCTGCTCCTTGATGTTAAACACGGGT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GTCTCCATGTTGTCCATTGTGAAATTTTTTCCCATACAG
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TTTTTCCATTCCCCTTCGGGATCGGGATCGGGATCGGGATC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GACAGCGAGGTTTTTCCAACTTGAAAAATAAAAAACCC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TGGGTTAGAATTTCCTCGACGCCCGGTGACGTGAGGAAATCAA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CTTTTTTTATCATACTTTGATTCTACTACTTGGTATCCAATT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CCGGAGGGCCGGGGGGTTAGGGTTTTACTCTGCTGTATCTTTT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TTCTAAACTACGCTTGGCAAGGCTTTTTGAGCAC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CTGTGCTTTTTTAAGCACAAACAACCAAATTGT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GTTTTTTGGCGGCGTTGTATCTTCCCATAGAAG
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CACGAGCCCACCAAACGGTGAATCTGTGCAGTGGTTCTTAAAA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GGTTGTATCGCACAGAACTCACTATTCTTTGCTACCGTGCCAT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GATTGGAGGTTCGCTCCTTTCAATTCTTCCACTAAAACT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GAAGTCGTCTACCCAGAACATGAAACCGAAACATA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	ATCCCATCCTTCGCCATCGACCAATCTTTCGATAAAGGCTAA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CCTCACAAGGGGGTGGAGAAGAGGGGGCGGGGATAAGA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TTTGCTCCCCTGTACACGAAGGGTTACTTTCCCCGGAAA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GTTATGATTTCTCCTGTTTGTGTTTTGTTTTACTGATAAC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GAGGGATACTATTATTTCCACTTTTGGCACTTCGG
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	ACTGTTTTGGATGCCTTCAGTTCCCGTCATGGTGTCGACATAA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TTTGTCGGGAGCAGTACCCCCAGGGAGCTCTTCGT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CATCCCAGTTGCGGGTAACGGCGCTCTCCTTAAAGGAGA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TGTTTCCAACCAATTTTGCTGATTTTGGGCTGAGTT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CCAAGCCGTAAAGTCCAAAATCCAGGACAACAGCCGTCGT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GCTGGGGAGGGTAGAACGCTAACTTGTTGTCGCACAAGAA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GCTAAAGTCACCAAGAAAATGAAGGGACTCCTTCTCGTCATTT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	AAAAGACTATTCCTGCTATTATGACGCCTACTATG
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GAGAACAAAAACAGACAACGGCATTTTTTTCATG
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CTGTGGAATTGTCCCAGATATCCCCACTTAAGCGAGG
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	ACAACGAAATAGATTCTTTCTATTTCGTCTTTGATAGTT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TGAGTAAAAGCCACCGCCAACGCTCGATTAATGCGA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TGTCATTTACTGTGAGTTCTGGTCCCGGATAGTTGAC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GAAAAACCATTACTGCCGCTACTGGCAAGAGG
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CCCTGGTAGGCTTTACCCGTGATCCAGGTTTCCAAAATGGAACC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CAACAAAATTCCCTTTGTCGCCCAAGCTGCAGT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GTGAAAAACCGCGAGTTCTAAGGCATCCTTATCTC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CGTGACCTCTTGTTCAAGCACTACACATTGAATTGAAT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TCAGTAATGGCCGTGTATTCTAGATATTCCTCTAGACCAT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TCGTTTTTTACTACCAAGGCGAACCCTGCGAAGTTTAGCA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CGTGCGTACGATTTGCACAACTTAAACTTACCGC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	AGTAGCAGCAGCAGTTAAACCGATGGTGGTATAGATTT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GGATACACCGTGGTGCATCCTATGCGTTTCCTACGTGATC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TTCCGCGTATCGCGTTTTGGACACATATAGTCCATTCAA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	ACCACACCAACTTCCCCGTCAAGGAAAGCATTTGTGGAGC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	ACCGGAAGGGTCAGTGACAGCGTGTGTTTCTCAGG
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TAAGGTATGGGTGGACTATCAAAAAAATCAATTGAATT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	ACGATACGAGAAGGGATTGGGATGCTGGCAAGGACAGC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	ATGGGCCTCCCCATACGGTCAGAATGATGGCGGCTGCAAA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GTCAAAACACTGTACACCTTTCCAAACTTTGGATACCA
CTTTTAACTTCTTAGCAAGTTTAATTAATGTGAAG

>CP025929|4|5|24158-26974|PILER-CR
	TTACATTTTGGGCGGGGCGAGTATAATCATCAAACCGCT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GCTCCTCTGGATACAGAGGAGTAAGCCAGCGTAGTCGGCTTCCTTCTGT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CATTTTGGTTGGTTTTAAAGAGCTCCAGCTCATCCCTTCT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TGCCGCCGTCGGGCTGCTCCTTGATGTTAAACACGGGT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GTCTCCATGTTGTCCATTGTGAAATTTTTTCCCATACAG
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TTTTTCCATTCCCCTTCGGGATCGGGATCGGGATCGGGATC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GACAGCGAGGTTTTTCCAACTTGAAAAATAAAAAACCC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TGGGTTAGAATTTCCTCGACGCCCGGTGACGTGAGGAAATCAA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CTTTTTTTATCATACTTTGATTCTACTACTTGGTATCCAATT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CCGGAGGGCCGGGGGGTTAGGGTTTTACTCTGCTGTATCTTTT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TTCTAAACTACGCTTGGCAAGGCTTTTTGAGCAC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACCTGTGCTTTTTTAAGCACAAACAACCAAATTGTCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACGTTTTTTGGCGGCGTTGTATCTTCCCATAGAAGCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CACGAGCCCACCAAACGGTGAATCTGTGCAGTGGTTCTTAAAA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GGTTGTATCGCACAGAACTCACTATTCTTTGCTACCGTGCCAT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GATTGGAGGTTCGCTCCTTTCAATTCTTCCACTAAAACT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GAAGTCGTCTACCCAGAACATGAAACCGAAACATA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	ATCCCATCCTTCGCCATCGACCAATCTTTCGATAAAGGCTAA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CCTCACAAGGGGGTGGAGAAGAGGGGGCGGGGATAAGA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TTTGCTCCCCTGTACACGAAGGGTTACTTTCCCCGGAAA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GTTATGATTTCTCCTGTTTGTGTTTTGTTTTACTGATAAC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GAGGGATACTATTATTTCCACTTTTGGCACTTCGG
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	ACTGTTTTGGATGCCTTCAGTTCCCGTCATGGTGTCGACATAA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TTTGTCGGGAGCAGTACCCCCAGGGAGCTCTTCGT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CATCCCAGTTGCGGGTAACGGCGCTCTCCTTAAAGGAGA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TGTTTCCAACCAATTTTGCTGATTTTGGGCTGAGTT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CCAAGCCGTAAAGTCCAAAATCCAGGACAACAGCCGTCGT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GCTGGGGAGGGTAGAACGCTAACTTGTTGTCGCACAAGAA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GCTAAAGTCACCAAGAAAATGAAGGGACTCCTTCTCGTCATTT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	AAAAGACTATTCCTGCTATTATGACGCCTACTATG
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GAGAACAAAAACAGACAACGGCATTTTTTTCATG
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CTGTGGAATTGTCCCAGATATCCCCACTTAAGCGAGG
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	ACAACGAAATAGATTCTTTCTATTTCGTCTTTGATAGTT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TGAGTAAAAGCCACCGCCAACGCTCGATTAATGCGA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TGTCATTTACTGTGAGTTCTGGTCCCGGATAGTTGAC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GAAAAACCATTACTGCCGCTACTGGCAAGAGG
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CCCTGGTAGGCTTTACCCGTGATCCAGGTTTCCAAAATGGAACC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CAACAAAATTCCCTTTGTCGCCCAAGCTGCAGT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GTGAAAAACCGCGAGTTCTAAGGCATCCTTATCTC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CGTGACCTCTTGTTCAAGCACTACACATTGAATTGAAT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TCAGTAATGGCCGTGTATTCTAGATATTCCTCTAGACCAT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TCGTTTTTTACTACCAAGGCGAACCCTGCGAAGTTTAGCA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CGTGCGTACGATTTGCACAACTTAAACTTACCGC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	AGTAGCAGCAGCAGTTAAACCGATGGTGGTATAGATTT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GGATACACCGTGGTGCATCCTATGCGTTTCCTACGTGATC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TTCCGCGTATCGCGTTTTGGACACATATAGTCCATTCAA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	ACCACACCAACTTCCCCGTCAAGGAAAGCATTTGTGGAGC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	ACCGGAAGGGTCAGTGACAGCGTGTGTTTCTCAGG
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TAAGGTATGGGTGGACTATCAAAAAAATCAATTGAATT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	ACGATACGAGAAGGGATTGGGATGCTGGCAAGGACAGC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	ATGGGCCTCCCCATACGGTCAGAATGATGGCGGCTGCAAA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC

Protein	Signature genes	Signature genes Name	Protein_function
CP025929.1\|AUS35833.1\|28520_29498_-\|group-II-intron-reverse-transcriptase/maturase	RT	pfam00078_RT_CAS-I:CAS-III	gnl\|CDD\|275209
CP025929.1\|AUS35839.1\|34020_34974_+\|hypothetical-protein	unknown	unknown	unknown
CP025929.1\|AUS35829.1\|21075_21648_-\|NYN-domain-containing-protein	unknown	unknown	gnl\|CDD\|350235
CP025929.1\|AUS35835.1\|31414_31630_+\|hypothetical-protein	unknown	unknown	unknown
CP025929.1\|AUS35840.1\|35121_35895_+\|cobyrinic-acid-a,c-diamide-synthase	unknown	unknown	gnl\|CDD\|224113
CP025929.1\|AUS35838.1\|32817_33753_-\|formylglycine-generating-enzyme-family-protein	unknown	unknown	gnl\|CDD\|224182
CP025929.1\|AUS35831.1\|27136_27412_-\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
CP025929.1\|AUS35832.1\|27411_28416_-\|CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|376633
CP025929.1\|AUS35825.1\|18176_19574_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|366360
CP025929.1\|AUS35821.1\|11210_12128_-\|type-III-B-CRISPR-module-RAMP-protein-Cmr4	cmr4gr7	COG1336_cmr4gr7_CAS-III-C	gnl\|CDD\|274210
CP025929.1\|AUS35823.1\|13372_16375_-\|type-III-B-CRISPR-associated-protein-Cas10/Cmr2	cas10	cd09679_cas10_CAS-III	gnl\|CDD\|378863
CP025929.1\|AUS35834.1\|29979_30606_+\|hypothetical-protein	unknown	unknown	unknown
CP025929.1\|AUS35830.1\|21710_22715_-\|CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|376633
CP025929.1\|AUS35826.1\|19694_20177_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|373079
CP025929.1\|AUS35827.1\|20185_20383_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|316933
CP025929.1\|AUS35837.1\|32370_32712_-\|hypothetical-protein	unknown	unknown	unknown
CP025929.1\|AUS35828.1\|20443_21031_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274008
CP025929.1\|AUS35836.1\|31626_32046_+\|VapC-toxin-family-PIN-domain-ribonuclease	unknown	unknown	gnl\|CDD\|350314
CP025929.1\|AUS35824.1\|16679_18098_-\|TIGR03985-family-CRISPR-associated-protein	WYL	mkCas0075_WYL_CAS-I:CAS-III	gnl\|CDD\|274901
CP025929.1\|AUS35822.1\|12124_13351_-\|CRISPR-associated-protein	cmr3gr5	pfam09700_cmr3gr5_CAS-III-B	gnl\|CDD\|187879

Protein	Function_ID	Function_description	E-value
CP025929.1\|AUS35833.1\|28520_29498_-\|group-II-intron-reverse-transcriptase/maturase	gnl\|CDD\|275209	TIGR04416, hypothetical_protein, group II intron reverse transcriptase/maturase. Members of this protein family are multifunctional proteins encoded in most examples of bacterial group II introns. These group II introns are mobile selfish genetic elements, often with multiple highly identical copies per genome. Member proteins have an N-terminal reverse transcriptase (RNA-directed DNA polymerase) domain (pfam00078) followed by an RNA-binding maturase domain (pfam08388). Some members of this family may have an additional C-terminal DNA endonuclease domain that this model does not cover. A region of the group II intron ribozyme structure should be detectable nearby on the genome by Rfam model RF00029. [Mobile and extrachromosomal element functions, Other].	3.73029e-100
CP025929.1\|AUS35840.1\|35121_35895_+\|cobyrinic-acid-a,c-diamide-synthase	gnl\|CDD\|224113	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning].	9.14545e-32
CP025929.1\|AUS35829.1\|21075_21648_-\|NYN-domain-containing-protein	gnl\|CDD\|350235	cd10911, PIN_LabA, PIN domain of Synechococcus elongatus LabA (low-amplitude and bright) and related proteins. This subfamily contains Synechococcus elongatus PCC 7942 LabA which participates in cyanobacterial circadian timing, it is required for negative feedback regulation of the autokinase/autophosphatase KaiC, a central component of the circadian clock system, and appears to be necessary for KaiC-dependent repression of gene expression. This subfamily belongs to the LabA-like domain family which includes the N-terminal domain of limkain b1, a human autoantigen localized to a subset of ABCD3 and PXF marked peroxisomes. Also included in the LabA-like domain family are human ZNF451, uncharacterized Bacillus subtilis YqxD, uncharacterized Escherichia coli YaiI, and the N-terminal domain of a well-conserved group of mainly bacterial proteins with no defined function, which contain a C-terminal LabA_like_C domain. Curiously Pseudomonas putida S16 NicB , which is described as a putative NADH-dependent hydroxylase involved in the microbial degradation of nicotine also falls into the LabA-like family. The PIN (PilT N terminus) domain belongs to a large nuclease superfamily. The structural properties of the PIN domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions; in some members, additional metal coordinating residues can be found while some others lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	5.78674e-43
CP025929.1\|AUS35838.1\|32817_33753_-\|formylglycine-generating-enzyme-family-protein	gnl\|CDD\|224182	COG1262, COG1262, Uncharacterized conserved protein [Function unknown].	4.42311e-74
CP025929.1\|AUS35831.1\|27136_27412_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	1.44077e-26
CP025929.1\|AUS35832.1\|27411_28416_-\|CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|376633	pfam01867, Cas_Cas1, CRISPR associated protein Cas1. Clustered regularly interspaced short palindromic repeats (CRISPRs) are a family of DNA direct repeats found in many prokaryotic genomes. This family of proteins corresponds to Cas1, a CRISPR-associated protein. Cas1 may be involved in linking DNA segments to CRISPR.	2.48384e-104
CP025929.1\|AUS35825.1\|18176_19574_-\|hypothetical-protein	gnl\|CDD\|366360	pfam00899, ThiF, ThiF family. This domain is found in ubiquitin activating E1 family and members of the bacterial ThiF/MoeB/HesA family. It is repeated in Ubiquitin-activating enzyme E1.	4.54173e-23
CP025929.1\|AUS35821.1\|11210_12128_-\|type-III-B-CRISPR-module-RAMP-protein-Cmr4	gnl\|CDD\|274210	TIGR02580, putative_CRISPR-associated_protein, CRISPR type III-B/RAMP module RAMP protein Cmr4. This model represents a CRISPR-associated protein from the family that includes TM1792 of Thermotoga maritima. This family is part of the broad RAMP superfamily (pfam03787) collection of CRISPR-associated proteins. It is the fourth of a recurring set of six proteins, four of are in the RAMP superfamily, that we designate the CRISPR RAMP module.	1.8118e-32
CP025929.1\|AUS35823.1\|13372_16375_-\|type-III-B-CRISPR-associated-protein-Cas10/Cmr2	gnl\|CDD\|378863	pfam12469, DUF3692, CRISPR-associated protein. This domain family is found in bacteria and archaea, and is typically between 101 and 138 amino acids in length. The proteins in this family are frequently annotated as CRISPR-associated proteins however there is little accompanying literature to confirm this.	2.05122e-37
CP025929.1\|AUS35830.1\|21710_22715_-\|CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|376633	pfam01867, Cas_Cas1, CRISPR associated protein Cas1. Clustered regularly interspaced short palindromic repeats (CRISPRs) are a family of DNA direct repeats found in many prokaryotic genomes. This family of proteins corresponds to Cas1, a CRISPR-associated protein. Cas1 may be involved in linking DNA segments to CRISPR.	1.51886e-114
CP025929.1\|AUS35826.1\|19694_20177_-\|hypothetical-protein	gnl\|CDD\|373079	pfam14462, Prok-E2_E, Prokaryotic E2 family E. A member of the E2/UBC superfamily of proteins found in diverse bacteria. Analysis of the active site residues suggest that members of this family are inactive as they lack the characteristic catalytic residues of the E2 enzymes. They are usually fused to or in the neighborhood of a multi/poly ubiquitin domain protein. Other proteins of the ubiquitin modification pathway such as the E1 and JAB proteins are also found in its gene neighborhood along with a distinct predicted metal-binding protein.	0.00146895
CP025929.1\|AUS35827.1\|20185_20383_-\|hypothetical-protein	gnl\|CDD\|316933	pfam14453, ThiS-like, ThiS-like ubiquitin. A member of the ubiquitin superfamily that is often fused to the ThiF-like (E1)- ubiquitin activating enzyme and is present in gene neighborhoods with components of the thiamine biosynthesis pathway.	0.000284698
CP025929.1\|AUS35828.1\|20443_21031_-\|hypothetical-protein	gnl\|CDD\|274008	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type. SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins].	0.00702741
CP025929.1\|AUS35836.1\|31626_32046_+\|VapC-toxin-family-PIN-domain-ribonuclease	gnl\|CDD\|350314	cd18747, PIN_VapC4-5_FitB-like, uncharacterized subgroup of the PIN_VapC4-5_FitB-like subfamily of the PIN domain superfamily. The PIN_VapC4-5_FitB-like subfamily includes the Virulence associated protein C (VapC)-like PIN (PilT N terminus) domain of Mycobacterium tuberculosis VapC4 and VapC5 ribonuclease toxins of the VapBC toxin/antitoxin (TA) system, and Neisseria gonorrhoeae FitB toxin of the FitAB TA system. This subfamily belongs to the VapC-like family of the PIN domain nuclease superfamily. VapC is the PIN-domain ribonuclease toxin from prokaryotic VapBC toxin-antitoxin (TA) systems. VapB is a transcription factor-like protein antitoxin acting as an inhibitor. Other members of the VapC-like nuclease family include eukaryotic ribonucleases such as Smg6, ribosome assembly factor NOB1, exosome subunit Rrp44 endoribonuclease and rRNA-processing protein Fcf1. The structural properties of the PIN (PilT N terminus) domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions, in some members, additional metal coordinating residues can be found. Some members of the superfamily lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	6.05277e-68
CP025929.1\|AUS35824.1\|16679_18098_-\|TIGR03985-family-CRISPR-associated-protein	gnl\|CDD\|274901	TIGR03985, hypothetical_protein_sll7078, CRISPR-associated protein, TIGR03985 family. Members of this protein family belong to CRISPR-associated (Cas) gene clusters. The majority of members are Cyanobacterial.	1.10585e-85
CP025929.1\|AUS35822.1\|12124_13351_-\|CRISPR-associated-protein	gnl\|CDD\|187879	cd09748, Cmr3_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; This protein is a subunit of Cmr complex.	1.96166e-37

>CP025929.1|AUS35830.1|21710_22715_-|CRISPR-associated-endonuclease-Cas1
MSTLYIVEQGSSLKVQHQQFQIFQQQQQLFKVPVNQVKNIILFGYCHLSHGAVQAALFHNIPITYYSPQGYYLGNLQSEIQAKITYLTQQVKQAENSDFVNTQANAIVRAKVHNSRILLMRLQRRHPNEIVKTAVINLKKIINSLNSAESLESLRGYEGKAANIYFQGLSSLFQGNFSFTKRTMRPPTDPINSLLSFGYTLLFQHLFSLVQLTGLHTHFGNLHTCRENHPALVLDLMEEFRAQIVDSLVVYLVNKNIFSPDNFTNPDEQGAVYLQQDSLKKFLKYWEEKLSLELTHPQTQRQVSLRSCLELQVQEYISCLMKKTERYQPMIWQK
>CP025929.1|AUS35829.1|21075_21648_-|NYN-domain-containing-protein
MTFIRRVLVFADADNTHISAQSFNRKINWQKIRDYLADPQEGRELIEMVIYLGLPPDKERFTEQRKTKEKFIYWAKSNGFLVVTKEGKSKGNDYETNVDVVMAMDAIELALEMKPDIVVLVTGDSDFAYLAQKLRRRGMRVEVASVEQSLGNDLKNSANSVIDLIELFDDFEAQNGTQDYHRIGNNNVFD
>CP025929.1|AUS35828.1|20443_21031_-|hypothetical-protein
MKIINGKLFGQPKGDFDPFKQQLEKLNQEVEKVQSSFEQLEQTIEQTENVKREALIRQVELYVQYLKENCENLENLWTQRQENHAKTYQRELKKMELFLKEQKQQLDFLENRKLPQIENKLTALKKQIPTKLLWLTFGSSLMIVIIYFCDWFDIYPFNKHPQKTKSSLVHHELVEENNQLKCQENCFESKTQIDF
>CP025929.1|AUS35827.1|20185_20383_-|hypothetical-protein
MRAIVNGKLIDLPEGTTVEDLRSRLPEIGNDDVMEEGFGGTKPLKDTEALKEGSKVWTVPKIVKG
>CP025929.1|AUS35826.1|19694_20177_-|hypothetical-protein
MTITISSNATKFTLNTRLSAELKLLDKVAKTIVVGSKTIGDVQYTAILIKRMPLSSSKFKVSNSDVLFLLPPDYPRLPPIGCYLNYPWDTVGEGDHHFTRQSYYGAPFLSEEGWYWYCVGLGGGFNRDKWLNSWRPSNNPERGHNLVTLFITARHAINNV
>CP025929.1|AUS35825.1|18176_19574_-|hypothetical-protein
MNTQPKPQDILLHISPLMWKQFRQAMLDARQHREEVIGFFFCQRHQLSKKKVRYIPQAWVVPTADCYEHQSASGLVLKQQFHQYLLDTYLCALSKSSSSSKTRKLDVVHIHTHFGDATPSFSCVDDRYEAEYAKFLASCYQEKPRLISGVFNESLEKSKFRIWNRQGTNHTSIEFCRSWLTPINSNFSGEDTELIFARQKVFGETVQKHLNQLKVALIGCGGIGAVFAEQLARLGVKNWVFIDHDRLETVNLNRMPAATQEMVDQGWYKVHYLKWLIKRTYAIGSHVKALSLSVEDEKAKAEIATADLIVVATDNHRSRQVAQELALEYARPLVCLGTHIEVKPHHQPRLYCRVTVPPLGGGWCLMCGNIINLQQAALESAPTEIAAIASEAGYLQGIDAPAVYWLNNICASTGVGVIHGIISGFLPIDSGLDWIYDFPNSNWLKANIDHLQSSDCYFCSSLCTL
>CP025929.1|AUS35824.1|16679_18098_-|TIGR03985-family-CRISPR-associated-protein
MSLPTITTLEELVPELARLANYPKSDQKQIDNFLNLIQNAVRLWIIEQSFYDFNSDFFVEIDQEWFDCITWIDKLWTKIPNVQNKKLEDLLLGEYPLFYQQKWQEQIIARYQLSSENLQQILSSHIFKVTQRTLRNNFKRLAQLNQPKLIKSASLKGHYKKVVSSSLNSLDNCNLIKHNNDIITENNWLSFLNDGLSTIAELLTTKINGHQRFFIQAEYIVPEALQDKVADWADNLKEFWKQSLISPIKIKYYSASKNITNYYIIYPVSIHYSQRAYYLYAFGETPDQNSSQALQWYGYRLERILSLKQIAWDFSDLTKRLRSQIHKNDKINHLYSPDYIQEQLELAYGFSFYREFNTMLLRFDQNYYQRHVKNTIRHSTFQKIENIQEVKKMIIEQIDSEIDNTKKIQREKLLAKVNCASEDVYYKLCYRVGDHNVIMRLRSWGPNVEVILPSDLRAQIKEYLEKNYKLYQ
>CP025929.1|AUS35823.1|13372_16375_-|type-III-B-CRISPR-associated-protein-Cas10/Cmr2
MIMPESESPINSRNFYCRKLCALLEDKSILQQLQSIHPEELQGQIEELPLQIASSSDRVNLGEAQGTNINSVKHPISGQTRNITSQDLRPEIPAEITSETDIEKLFWWFWRFYPELIRQNQNDFFLYPAHSILPDCPLHSYKSTVSALVGAMYPEHWQEGGKSQHLYLFLFTFSPVQEFIKASRKFVDFWAGSYLLHYLSVKLCWYIAETYGSDAVITPSLWSQEIIDALIVKKYPDFAANFASFQDGTSPVGRFDNGISTSLSTAGFPNVIMALVPGKEAARELGEKLKKCLIEEWSEIAKKVREDIKKRTLEFLKDTKNQQKIDEILLKEFLSEQEICKRDLKKWQIGHHGSCWEWNKLWEAQIEKTWETYWTAMPLGNPEQPLTINPTEENYQQWKQAQNAIAPPHLAESLPTTAEQNLYEQINTGTWWGALQARLGQSIQAVKNTRTWAIPTAPGDRSTLSGQFSAVHPQLHYHGQFKNGGGLSARSMRLFWRLMAEVYPGLFNGSEKLNAIELTKRMAWRYGGVAESLGINLGQEDDTNYDNLIRFPNLSSIAAARFTYEDFKKGGQKTRNYWNCLNTLINQQLPNKADTFASRTRGRPYQIPKVDRQINPENRNGQNFNGVMFSSKWLADDMNCNAQETATLRSLVEEAHKKAKFGEGSPADWWVIVLGDGDGMGKYVSGSKLKKYKEYLITDAIAENVKNHQDYPDLLATQKRMGPATHVGLNRALLDFSNRLVPYLTEERYCGKVVYSGGDDVMAVLPLADLLGYLRSLRAAWCADPDPEREFSTEGGYWTPKQTLQGLQQRPYFTMGDGATMSLGIVIAHKSVPLPTVLESLWTAEKDRAKKLYGKDGLCFRVIYGSGNTLEALMKGELLDLWWNFMQYDQQDLSALFYRLAEELPRHACVTESDRLLRKAAQVIINRRDQTLESHIQENLLNWLDQWENWAYQTYNQVNKNKTEKEVPLGTTEKDLANLLRFSAFWNDKRMQQMKWGETE
>CP025929.1|AUS35822.1|12124_13351_-|CRISPR-associated-protein
MYWYAITPLDVLLFREAKPFSPGESAWAKGLFPPFPSTVFQALRSTLSKDVKDLDFMGPFLLSPQDRLCFSTPKDLVAVKWGLKTQKIDEETEEEEPKEDNLDDTASDWHRTLRLQPVDRTDEAWEHLLFDEAGLAPMVAPFRELVEEENRREFFCRPYPWITAEALSEYLQGKELTDPTQFQEDPWNVQIMPHIQMQADKRQVKDEDGYFTEVAIRLKPGWRLVAGISIDLRETVVRLGGEGHRAIVIPFTLSDADQTLLNPKTNTTGDFAYLLTPGLAVKEEAVYGVYPCDWQSILAGCVSDRPLLWGGVSQIRRKLVISCGKENQERTTSQISLGSSSPNSEAKGDEEFALLPQRAFVPPGTVYIFNQIPSETEALLPKPESTGNWLTSFQKLNYGKLLWGNTPL
>CP025929.1|AUS35821.1|11210_12128_-|type-III-B-CRISPR-module-RAMP-protein-Cmr4
MNTYLTYLYLLTPLHTGGSADEGNLMGIAREVHTEFPYLPASSLRGKIRSALEPSNPQSEEEKALAKEVSQFFGQKIKDGQQPTEGEVWFAEATLLFFPIASLSHHLVWITCPLWLERWNRWLQKSPLTQLIQNCREQITEARPALVSFTPEPLYLQTAILQQNALGQLNTNDSNSISQSLQNLTNANGMINQLLKKLVIVDDEDCIALVETGLQREVRVALNEGEKTVKGGSFRSEEAIPPETVLFFPWGMKPVKQTENTQNIRAKTSELLKNKLQFGGLEGLGRGWCDLKTIETTETTTGSQK
>CP025929.1|AUS35831.1|27136_27412_-|CRISPR-associated-endonuclease-Cas2
MLVLIVYDIPDNKRRTKLSNFLEGYGKRVQFSVFECFLSLAEMRELYEKVKKKVKPEEDNVRFYWLSKDATSKTLTIGSKHPEPPPQYYVI
>CP025929.1|AUS35832.1|27411_28416_-|CRISPR-associated-endonuclease-Cas1
MATLYLLEQGTSLLKEQFRFLIHVPDKDKIEVPIRDVERILLFGNINLSTPAIATCLESRITVLFLSLSGRYKGHLWSKEASNLNVELLQFQHQNDRQFQLNTSKSIVRGKLINSKQLLLRLNRQRNILDIEQAILGINTDLEALKLVDNIDSLRGYEGISAARYFSALGQLIINPDFNFSQRHRQPPTDPVNALLSFGYTLLFNNVLSLIITEGLSPYLGNFHYGEKKKPYLAFDLMEEFRSPIVDSLMLTLFNQSILKSKDFESLTEKPGIYLTEQGRRLFLNQFEKRMTEKVTHSQISSQISYREAIQLQIRLYKRSLLSSIAYEPFFRAS
>CP025929.1|AUS35833.1|28520_29498_-|group-II-intron-reverse-transcriptase/maturase
MITIVNDFLNLSNFQQAWLKVKENNGCAGVDAETIDDFAQNQDFNLVQLREAVANSTYCPHPYKQVKIPKEGGKWRELRIPTVRERIVQQALLNVLAPLVEPHFSPCSFAYRPNLSYIQAVEKVADWRDLGYRWVLDADIVQYFDNIDHQILLVQLRQYIDHPGILCLIKAWISSGILSEQGLNLPKKGIPQGSVISPLLANIYLDKFDHTIANSDIKLVRYADDFLILARTQERIRQAYSEVVDLLDSLKLNINRDKTQITDFEHGFCFLGHGFLENAIFPVDKPKKKQGDRKTQRVGEYLSTGKKKVQTQKSYNQKKKKYLSN
>CP025929.1|AUS35834.1|29979_30606_+|hypothetical-protein
MDTKTNKNIAPKIRKLVETARELYQTKYALNVTRLTSLKSLCQEKEAAANFALYLAKLVVKQMESNQTTRSFLGEEAWTEHCQLINHTVEKMEDYLEYPTPDKRQDLHKLLTQLEQIQGWKRHIRFGTQIRVINNKYALIIEDALRCMTSSDYPYWSYQMARDYAERYNSSCGSGLTSESAPLVAEIAEFWCQYYFGKTLTEKFPDKS
>CP025929.1|AUS35835.1|31414_31630_+|hypothetical-protein
MLVKGIKKGKTIELLEEVDFPDNEELLVEIREVNDFWSALQDFRQRVDLASIDDDSFDNLRDKSTGRNVRL
>CP025929.1|AUS35836.1|31626_32046_+|VapC-toxin-family-PIN-domain-ribonuclease
MTLKYLLDTNILSEAKRPHPNQKVMTKLRLSKREIATATLVIHELLFGCFRLPLSKKRQDLEDYVNNVILANLPLFDYDLKSAQYHARERSRLSKFGKSPAFVDGQIASIAFTNNLTLVTNNVDDFQDLEGLVIENWFL
>CP025929.1|AUS35837.1|32370_32712_-|hypothetical-protein
MGNSVTVTGEHPRKGQTGEITALPNPYAAIILFDDGNREMLGSDFLSPKTIDVTAKFQVKEGLNYRAGNGCEWYVRVEQATWERLLRYRNRVGTATIDGAIKRMLESIENSPP
>CP025929.1|AUS35838.1|32817_33753_-|formylglycine-generating-enzyme-family-protein
MKTLQVKRQSQKFRGYRDYIDGVPLEMVLIPDGIFTMGSPETEEESHADERPQHHVTITSFLMGRYPITQAQWQAIAARTDLKINIDLVEDPSYFKKPYQDQDREIDRWQRPVEQVNWYGAVEFCGRLSKLTGRTYQLPSEAQWEYACRGVTTPLNLKKGEFYPPFHFGETITTDLANYRGEKSYGKGTQGEYREQTTPVGYFQVVNAFGLSDMHGNVWEWCADDWHGNYKGAPTDGSAWLDSNQEKKVKSENEPYSGKNDDISLNGVLRGGSWGSDPTLCRSAIRYDYYRRDSRYDVNGFRVVCVFGRSL
>CP025929.1|AUS35839.1|34020_34974_+|hypothetical-protein
MNEIERDFIKKINQLTRKSSFYQRFNERRYSHVKGYIDHDDVIFLIARLLTSYQCYDADIFEMDFTHRTSLIILDRAYQKGFGSYWLSESLFDAFCNSQLPNTVGQLKQVMPCGVLLLPPKLKNPDGQSLKWLCFFHRLADQTIAPIEIMGSRLEIGVAAEDTLSWFTVFDDGTQYGVHRCLKVDENLQLDYQDENEMFIDRDLALTGLNTVVETEKEFTDRVTDLLVQTLLYLQQKSNFSVSSALSPIKNSGKNRKLTPHIIGRDYRIRSQSDPDVPTDRQYRTHWRRGFYRWQPYGPRERPDRKLIWIEPVLVNG
>CP025929.1|AUS35840.1|35121_35895_+|cobyrinic-acid-a,c-diamide-synthase
MKTIVISSLSGGQGKTTTAFFLGKMLGRTARVLSVDADPQANLTFFSGHEVEPNAPTLLEVIKGTVAATDAIYALNDSRFLIPADDGLSNAQEYLASSGMGALILRTRLKLPADYFDYCIIDSPPARTQISIATIGAADYLLIPAEASTKGVNSLVRTLELSDNLSKLGAFTGTLLGVIPFRDRWFGRSHSKDSAAAIAAMAEVAPGVKIFPSILESERYKQALNQGKLLSEIGHEDMETSFRSVIELLNTKTKEER

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Crispr_ID: CP025929_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP025929_6

105417-107122

TypeV-U2,TypeV-U4?

I-D,II-B

Consensus_repeat	Method
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	CRT
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	PILER-CR
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	CRISPRCasFinder

23 spacers

c2c8_V-U2

The CRISPR arrays of CP025929_6

>merge|CP025929|6|105417-107122|CRT,PILER-CR,CRISPRCasFinder
ACATGACAGGTTCGGTAAAGCCAAGCTTAATTGCTTCGCTCAGATCATAAGTAGCAACAATTGACCGGTGAAAGTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTCGTGATCCGAGGCTTGAGGGAGCATCTTTTCCCAAGTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTCCCGTTATAGGTGACACGGGGATAAGTGATCTTGTTGTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTCGGTTAGGACACGGTAAACCATCGATGATTAATCTAGTGTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTCTTGGAGACGGGAGCCTCTTTGTCTTTTAACCAAAGGTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTCATTAAGAGATTTCCCAATCTGAGGAACGACTACAATGTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTCAATTAATAGCCGGGTGACTGGGGCGACTCAGGCGGAGTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTCACTCAATCTCCCCACCCAACGGTCAGACATAGGAAAGTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTCTTTGCTTAATAGTCAAATGAGTTGTTTTCAGGGTTAGTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTCATTTTTTTATATTCCATCCTCTTTTAATCGATAAAAGTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTCAGATTTCTGGTGAGGATTTCGTGCGATCGACTGCGTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTCCTGTCCCCCCGATCGCGATCAGAGCATTTATCCCAGTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTCAAGGGTTTTCCAGTGGTGAGGAAATAGTGCAAAGATAGCTGTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTCTTTATTGAATCCTCGCCAAAAGCGAGGCTTTTTCTGTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTCTAAAGAGGGAAAATCCGTTCATCTACCAATAGCTGTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTCTTTTATCAAAACTGAATCAGCCCAATTTCAAATACCGTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTCAAGGATAGTTCTATTATGAAGGATTTGGTGGTTCAGTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTCCCGTGTTCCACAAAACAGGGGAACAAATCGCCAAGAAGTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTCAGGACTAAAAAGCCTTTACACGACTACTTACACCAGTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTCCAGGCCAACAAAAAGCCGAACTCTTTATATTCAAATGTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTCTTATTAGAAATCAGCACCGGATACCCCAACTTGAGTGTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTCAAGAGTTTTATAGCGTTGCGGCTACGAAACACTTGTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTCGAGGCTTTGTAAAAAATTCGATAGTTGGATTTGGGTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC

>CP025929|6|5|105417-107122|CRT
ACATGACAGGTTCGGTAAAGCCAAGCTTAATTGCTTC	GCTCAGATCATAAGTAGCAACAATTGACCGGTGAAA
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	GTGATCCGAGGCTTGAGGGAGCATCTTTTCCCAA
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	CCGTTATAGGTGACACGGGGATAAGTGATCTTGTT
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	GGTTAGGACACGGTAAACCATCGATGATTAATCTAGT
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	TTGGAGACGGGAGCCTCTTTGTCTTTTAACCAAAG
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	ATTAAGAGATTTCCCAATCTGAGGAACGACTACAAT
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	AATTAATAGCCGGGTGACTGGGGCGACTCAGGCGGA
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	ACTCAATCTCCCCACCCAACGGTCAGACATAGGAAA
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	TTTGCTTAATAGTCAAATGAGTTGTTTTCAGGGTTA
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	ATTTTTTTATATTCCATCCTCTTTTAATCGATAAAA
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	AGATTTCTGGTGAGGATTTCGTGCGATCGACTGC
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	CTGTCCCCCCGATCGCGATCAGAGCATTTATCCCA
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	AAGGGTTTTCCAGTGGTGAGGAAATAGTGCAAAGATAGCT
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	TTTATTGAATCCTCGCCAAAAGCGAGGCTTTTTCT
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	TAAAGAGGGAAAATCCGTTCATCTACCAATAGCT
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	TTTTATCAAAACTGAATCAGCCCAATTTCAAATACC
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	AAGGATAGTTCTATTATGAAGGATTTGGTGGTTCA
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	CCGTGTTCCACAAAACAGGGGAACAAATCGCCAAGAA
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	AGGACTAAAAAGCCTTTACACGACTACTTACACCA
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	CAGGCCAACAAAAAGCCGAACTCTTTATATTCAAAT
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	TTATTAGAAATCAGCACCGGATACCCCAACTTGAGT
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	AAGAGTTTTATAGCGTTGCGGCTACGAAACACTT
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	GAGGCTTTGTAAAAAATTCGATAGTTGGATTTGG
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC

>CP025929|6|6|105490-107122|PILER-CR
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	GTGATCCGAGGCTTGAGGGAGCATCTTTTCCCAA
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	CCGTTATAGGTGACACGGGGATAAGTGATCTTGTT
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	GGTTAGGACACGGTAAACCATCGATGATTAATCTAGT
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	TTGGAGACGGGAGCCTCTTTGTCTTTTAACCAAAG
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	ATTAAGAGATTTCCCAATCTGAGGAACGACTACAAT
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	AATTAATAGCCGGGTGACTGGGGCGACTCAGGCGGA
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	ACTCAATCTCCCCACCCAACGGTCAGACATAGGAAA
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	TTTGCTTAATAGTCAAATGAGTTGTTTTCAGGGTTA
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	ATTTTTTTATATTCCATCCTCTTTTAATCGATAAAA
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	AGATTTCTGGTGAGGATTTCGTGCGATCGACTGC
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	CTGTCCCCCCGATCGCGATCAGAGCATTTATCCCA
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	AAGGGTTTTCCAGTGGTGAGGAAATAGTGCAAAGATAGCT
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	TTTATTGAATCCTCGCCAAAAGCGAGGCTTTTTCT
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	TAAAGAGGGAAAATCCGTTCATCTACCAATAGCT
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	TTTTATCAAAACTGAATCAGCCCAATTTCAAATACC
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	AAGGATAGTTCTATTATGAAGGATTTGGTGGTTCA
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	CCGTGTTCCACAAAACAGGGGAACAAATCGCCAAGAA
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	AGGACTAAAAAGCCTTTACACGACTACTTACACCA
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	CAGGCCAACAAAAAGCCGAACTCTTTATATTCAAAT
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	TTATTAGAAATCAGCACCGGATACCCCAACTTGAGT
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	AAGAGTTTTATAGCGTTGCGGCTACGAAACACTT
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	GAGGCTTTGTAAAAAATTCGATAGTTGGATTTGG
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC

>CP025929|6|6|105490-107122|CRISPRCasFinder
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	GTGATCCGAGGCTTGAGGGAGCATCTTTTCCCAA
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	CCGTTATAGGTGACACGGGGATAAGTGATCTTGTT
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	GGTTAGGACACGGTAAACCATCGATGATTAATCTAGT
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	TTGGAGACGGGAGCCTCTTTGTCTTTTAACCAAAG
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	ATTAAGAGATTTCCCAATCTGAGGAACGACTACAAT
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	AATTAATAGCCGGGTGACTGGGGCGACTCAGGCGGA
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	ACTCAATCTCCCCACCCAACGGTCAGACATAGGAAA
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	TTTGCTTAATAGTCAAATGAGTTGTTTTCAGGGTTA
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	ATTTTTTTATATTCCATCCTCTTTTAATCGATAAAA
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	AGATTTCTGGTGAGGATTTCGTGCGATCGACTGC
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	CTGTCCCCCCGATCGCGATCAGAGCATTTATCCCA
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	AAGGGTTTTCCAGTGGTGAGGAAATAGTGCAAAGATAGCT
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	TTTATTGAATCCTCGCCAAAAGCGAGGCTTTTTCT
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	TAAAGAGGGAAAATCCGTTCATCTACCAATAGCT
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	TTTTATCAAAACTGAATCAGCCCAATTTCAAATACC
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	AAGGATAGTTCTATTATGAAGGATTTGGTGGTTCA
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	CCGTGTTCCACAAAACAGGGGAACAAATCGCCAAGAA
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	AGGACTAAAAAGCCTTTACACGACTACTTACACCA
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	CAGGCCAACAAAAAGCCGAACTCTTTATATTCAAAT
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	TTATTAGAAATCAGCACCGGATACCCCAACTTGAGT
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	AAGAGTTTTATAGCGTTGCGGCTACGAAACACTT
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	GAGGCTTTGTAAAAAATTCGATAGTTGGATTTGG
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC

Protein	Signature genes	Signature genes Name	Protein_function
CP025929.1\|AUS35915.1\|99828_103542_+\|hypothetical-protein	unknown	unknown	unknown
CP025929.1\|AUS35918.1\|107220_109008_-\|transposase	c2c8_V-U2	-	gnl\|CDD\|223747
CP025929.1\|AUS35924.1\|111658_111877_+\|hypothetical-protein	unknown	unknown	unknown
CP025929.1\|AUS35919.1\|109150_109300_+\|CopG-family-transcriptional-regulator	unknown	unknown	unknown
CP025929.1\|AUS35914.1\|98771_99677_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379352
CP025929.1\|AUS35921.1\|110124_110316_+\|hypothetical-protein	unknown	unknown	unknown
CP025929.1\|AUS35916.1\|103767_104319_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377970
CP025929.1\|AUS35925.1\|112166_112508_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372965
CP025929.1\|AUS35911.1\|96334_97954_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|350180
CP025929.1\|AUS35922.1\|110567_110750_-\|hypothetical-protein	unknown	unknown	unknown
CP025929.1\|AUS35912.1\|97950_98214_-\|hypothetical-protein	unknown	unknown	unknown
CP025929.1\|AUS35920.1\|109432_110119_+\|hypothetical-protein	unknown	unknown	unknown
CP025929.1\|AUS35917.1\|104333_105062_+\|hypothetical-protein	unknown	unknown	unknown
CP025929.1\|AUS35913.1\|98203_98551_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226147
CP025929.1\|AUS35927.1\|113724_114096_+\|hypothetical-protein	unknown	unknown	unknown
CP025929.1\|AUS35926.1\|112579_113662_+\|hypothetical-protein	unknown	unknown	unknown
CP025929.1\|AUS35908.1\|92848_93088_-\|hypothetical-protein	unknown	unknown	unknown
CP025929.1\|AUS35910.1\|95205_96354_+\|transposase	unknown	unknown	unknown
CP025929.1\|AUS35923.1\|110828_111497_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237171
CP025929.1\|AUS35909.1\|93463_93736_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP025929.1\|AUS35913.1\|98203_98551_-\|hypothetical-protein	gnl\|CDD\|226147	COG3620, COG3620, Predicted transcriptional regulator with C-terminal CBS domains [Transcription].	0.000136199
CP025929.1\|AUS35914.1\|98771_99677_+\|hypothetical-protein	gnl\|CDD\|379352	pfam13730, HTH_36, Helix-turn-helix domain.	7.31222e-06
CP025929.1\|AUS35918.1\|107220_109008_-\|transposase	gnl\|CDD\|223747	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	1.24249e-25
CP025929.1\|AUS35925.1\|112166_112508_+\|hypothetical-protein	gnl\|CDD\|372965	pfam14216, DUF4326, Domain of unknown function (DUF4326). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria, archaea, eukaryotes and viruses. Proteins in this family are typically between 100 and 162 amino acids in length. There are two completely conserved residues (P and C) that may be functionally important.	2.92051e-22
CP025929.1\|AUS35911.1\|96334_97954_+\|hypothetical-protein	gnl\|CDD\|350180	cd18793, SF2_C_SNF, C-terminal helicase domain of the SNF family helicases. The Sucrose Non-Fermenting (SNF) family includes chromatin-remodeling factors, such as CHD proteins and SMARCA proteins, recombination proteins Rad54, and many others. They are DEAD-like helicases belonging to superfamily (SF)2, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. Similar to SF1 helicases, SF2 helicases do not form toroidal structures like SF3-6 helicases. Their helicase core consists of two similar protein domains that resemble the fold of the recombination protein RecA. This model describes the C-terminal domain, also called HelicC.	2.27075e-33
CP025929.1\|AUS35916.1\|103767_104319_+\|hypothetical-protein	gnl\|CDD\|377970	pfam08305, NPCBM, NPCBM/NEW2 domain. This novel putative carbohydrate binding module (NPCBM) domain is found at the N-terminus of glycosyl hydrolase family 98 proteins. This domain has also been called the NEW2 domain (Naumoff DG. Phylogenetic analysis of alpha-galactosidases of the GH27 family. Molecular Biology (Engl Transl). (2004)38:388-399.).	0.00724106
CP025929.1\|AUS35923.1\|110828_111497_-\|hypothetical-protein	gnl\|CDD\|237171	PRK12678, PRK12678, transcription termination factor Rho; Provisional.	0.000554964

>CP025929.1|AUS35917.1|104333_105062_+|hypothetical-protein
MKRRKFIQYSTIGGGSFLLSLGLNNLPPAGAFIWGLIFRALLQAAFSGFQMRDQKWWDERLDVMLAQREFIRQRFTDVSVAEVESPQYNVLVAAQQTQSQSLIIDPKKNKNIPNKINGTITNNVAFACPRIENGEECLATFAGPAAVGMTIAATYLKQNERMSFDDVQASIIPKFQGNVQYSDMRGWSDSTAFRAYPNSYSDNGVRIRYDAIDPRPGGYGIIDVSVDSWHLIQIPKIRVDFV
>CP025929.1|AUS35916.1|103767_104319_+|hypothetical-protein
MKLRSIVSSLIAASLVLASTHPVDAQNRRPARVSSLTEMPCQNINGLYLKGINEDIPVGLEIFRAVSRLVYYTLSDGIIPKQAVQIACRLAQVREKPKYKTLTIAFAMSDSNPRSNGSQIRFSVYKDGKPYGYKDVTKGEKLLWQVDVTGVRSLALEVECIRDTNFSNWKDCPPLYFFEDTLK
>CP025929.1|AUS35915.1|99828_103542_+|hypothetical-protein
MNKNSWYNSHSFNFRGLTWEFTYIEATASRTIEATKPDGTKIHLKIPIKETTKFAYPLAWLEKWEQSKGKRILLREKAESRTLFEMQLTPSKPPQDGTDKTLLGVNEKKEEVQLTPSKLQQDGTDKTLLGVNENKEEVQLTLSKLQQDGTDKTLLGVNEYEPASMEELTPSKLQQDGTDKTLLGVNENKEEVQLTLSKLQQDGTEKTLLGVNEYEPASMEELTPSKLQQDGTDKTLLGVNENKEEVQLTLSKLQQDGTDKTLLGVNENKEEVQLTLSKLQQDGTDKTLLGVNEYEPASMEELTPSKLQQDGTDKTLLGVNENKEEVQLTLSKLQQDGTEKTLLGVNEYEPASMEELTPSKLQQDGTDKTLLGVNENKEEVQLTLSKLQQDGTDKTLLGVNENKEEVQLTLSKLQQDGTEKTLLGVNEYEPASMEELTPSKLQQDGTDKTLLGVNENKEEVQLTLSKLQQDGTEKTLLGVNEYEPASMEELTPSKLQQDGTDKTLLGVNENKEEVQLTLSKLQQDGTDKTLLGVNENKEEVQLTLSKLQQDGTDKTLLGVNEYEPASMEELTPSKLQQDGTDKTLLGVNENKEEVQLTLSKLQQDGTEKTLLGVNEYEPASMEELTPSKLQQDGTDKTLLGVNENKEEVQLTLSKLQQDGTDKTLLGVNEYEPASMEELTPSKLQQDGTDKTLLGVNENKEEVQLTLSKLQQDGTDKTLLGVNENKEEVQLTLSKLQQDGTDKTLLGVNENKEEVQLTLSKLQQDGTDKTLLGVNEYEPASMEELTPSKLQQDGTDKTLLGVNENKEEVQLTLSKLQQDGTDKTLLGVNENKEEVQLTLSKLQQDGTDKTLLGVNEYEPASMEELTPSKLQQDGTDKTLLGVNENKEEVQLTLSKLQQDGTDKTLLGVNEYEPASMEELTPSKLQQDGTDKTLLGVNEYEPASMEELTPSKLQQDGTDKTLLGVNEKKEEVQLTPSKLQQNETEKTLLGVNENKEEVQLTLSKLQQDGTDKTLLGVNEYEPASMEELTPSKLQQDGTDKTLLGVNEKKEEVQLTPSKLQQNETEKTLLGVNENKEEVQLTLSKLQQDGTDKTLLGVNEYEPASMEELTPSKLQQDGTDKTLLGVNENKEEVQLTPSKCLSCCFCQRISSILLTCLASPKYFTEKTAKECERFTPIGQAPKIAETLSEAEGNLPKRPRRRRGTGSGTFITTYANHGKYGKKYPQISYQVEFGGRNDRSM
>CP025929.1|AUS35914.1|98771_99677_+|hypothetical-protein
MITQKFYPITITELTSLSGKLTETEIVIYLYLMAANPFDDRFQEFDTSVIAENLDVTRRTVQRTLKKLESLGLIELEIKSFTYRRTKASDTEELDDPRIAKRQQDRLGDSRIALATVGSPQRQQDRHGEPEPLQDKDSEASKTIKTIKTSQTAKDEAGDDIFSEEKLTPSKISQKIIDQLVELDIPINKKIEEAIEKYGECQAIRAINHIKETAATIKSKYAVFLYQISQIQGNSSKELSKEFLEWYQYAKGEITEDIPPKLGNSSKELSKEFLEWYQYAKGEITEDIPQNYCHEIAMVSL
>CP025929.1|AUS35913.1|98203_98551_-|hypothetical-protein
MELDPFIRAFVKILKARGIQGKEVAEWTGRTPGNISRIRNGEDSPRLRDFMLILMAIEKRCPGFFDDFCRQLSGQSRRLTISPEEFVNSLDSSEFAALMIATGRRLAKGPASYEC
>CP025929.1|AUS35912.1|97950_98214_-|hypothetical-protein
MSANSKTDINFIEEQIKALSPDDRAALLSRLALSTTIVFCGSSVVSFGSAVQINNSQDLNAFIDKIPPEALGEFLKAIGNYIVNHKA
>CP025929.1|AUS35911.1|96334_97954_+|hypothetical-protein
MLYLPSSWLVPLPDLAIANSDLETIVARLHKDLDQYFDWTYDIRQYKGCVNLRINCKLLTDIFFHWFGGQKAFSKRIPSECFHWLSEARKLIVEGLIDSDGYNKTVKSLNDSNLETTTIFYTSISQMLLEDIKVLLLTLNIESVIHTRKMVQDARPEFSNCRQGYVLRFCLSRIEPSFAERQTHKLGLNVQNAQLLKVLQVITEKPTKELVYDFAVEGTENFVASGVVCHNTGTPIKNGRPINLFPLLQITQHPLAADSWEFQKYYCNAHHKSIGTKSIWDNTGAAHLDELSKKTEDIILRRKKAECLDLPPKLRSLTPILLEGEAGKNYRQEIDRHISEYREREKRGEVKEGAEALVTINALRKVGSLYKVPAAIEYTAELLEQGQAVVIFTEYLESAKALYTALSQIAPSELLTGETKQEDRQAIVDRFQAGTSKIFIGTIKAGGVRLTLTAANQVILVDRPWTPGDADQAEDRCYRIGQNNTVNAYWIQLGAIDEAIDTLLAEKRDRIELVLKGKRKTLRGLSKPAELAKELLEIL
>CP025929.1|AUS35910.1|95205_96354_+|transposase
MISELYQKVLENELGRARYLLLLMIVGTLQILKQAKLEILAEALPIPILFESRRKKLKRFLKLEILNIEKIWFLCLKEMLKQQQRFTTKGLAYIAIDRTSWGAINILMVSLIYDKRAIPIYWEILDKKGSSNLEEQQRVLEKTLTVLSGHKIVVLGDREFCSVSLGKWLQKQSLYFCLRQKKSTNVKTKEGIYQEMRELGLSPGTQLFLNDVNITKEQGFGQFNLAGKWKKTYGGFQTKEPWYILTNFVDLETAIIAYQKRFDIEEMFRDFKSGGYSLEGSQLAPQYLSKLIIVIAIAYTSATLQGKKIKDMGIQKYVTRPEKRYKGQRRHSSFYVGQHLYHWLQLHQMFQKNIEELMQISRYRLKDYIKGQRAISLALSTF
>CP025929.1|AUS35909.1|93463_93736_+|hypothetical-protein
MARRIASGSLLKHQAKAGLKMIQKYQKSQLEPAGYTLPDWKAIELQYPDKFESKEEESPYRIEILENKITVYAPYDATGRLQKKAKAIEG
>CP025929.1|AUS35908.1|92848_93088_-|hypothetical-protein
MLVSGSPPPQERGEDDGAAGRGGWGGRGCQGGGGCGGSLVLLYALYTAFVKFFQIALSSPRGTVGAIFAKYLNAYPCLS
>CP025929.1|AUS35918.1|107220_109008_-|transposase
MVKKPPKEKEDKPKKVIEFKIHPNKEQVEEINRSFASCKLLWNLSIALKEESKQRYYRKNYKFDEFSPEIWELSYSGHYDEEKFKSLKDKEKELLIKNPCCKIAYFKKTSDGKEYTPLNAIPIRRFMNAEDIDKDAVNYLNRQKLAFYFREDTAKFIGEIETEFKKGFFKSVIKTAYDAAKKGIRGIPKFKGRRDKVETLVNGQPDTIKIKSNGVIVSSKIGLLKVRGLDRLQGKAPRMAKITRKATGYYLQLTVETDDTIYKESDKCVGLDMGAVAIFTDDLGRQSEAKRYAKIQKKRLNRLQRQASRQKDNSNNQRKTYAKLARVHEKIARQRKGRNAQLAHKITSEYQSVILEDLKLKNMTAAAKPKEREDGDGYKQNGKKRKSGLNKALLDNAIGQLRTFIENKANERGRKIIRVNPKHTSQTCPNCGNIDKANRVSQSKFKCVSCGYEAHADQNAAANILIRGLQDEFLRAIGSLIKFPVSLIGKYPGLEGKFTPDLDANQESIGDAPIENAEHSISKQMKQEGNRTPTQSENGSQSLIFSSAPPQPCGDSHGKNKPKALPDKASKRSSKKPRGAIPENPDQLTIWDLLD
>CP025929.1|AUS35919.1|109150_109300_+|CopG-family-transcriptional-regulator
MTTDKLYTLTAKIPPNELTILENYCKKAKRTKTEVIRELIRSLSGRVDS
>CP025929.1|AUS35920.1|109432_110119_+|hypothetical-protein
MSKVISFSISDRYLDKLRSLYPDLTDNLAAKQFLTDQLDADLDDSLDTNLDDKLKILIEKSLEDRLDATEKSISKWILDFDNRIKDIDREVKDRSIAVDDQIEKIKNRLDNWTLATSSDIKDVKDRSIAIDHQIKAIEARLDESLDKNLDDSLDESLDSSLYEGYSEIFIDRLDDNLDDSLDNELNDRLDDTLDDSPDKSLDDATIDKKQGQSIEPAIEPDGQPFDLA
>CP025929.1|AUS35921.1|110124_110316_+|hypothetical-protein
MANLEGNTKPAPERLAKIDRRLAKKGDQRGMAKARSRKQEGIPDSLKKEHRGAPYGPGCPGLR
>CP025929.1|AUS35922.1|110567_110750_-|hypothetical-protein
MCEPTGELYAGFWGGGWGGGWVAGANEKVRGVRSPPPDERANLSFVSSPLDTGMVPERGP
>CP025929.1|AUS35923.1|110828_111497_-|hypothetical-protein
MSVHRQKKAPTESRGRKKALERQRHPPARTDRNQAPISRNRDTRRQPNATRNTQPQRQSQRSPRTRTQPAETRARVSRRNQPRRTSATRKREQDTALSRQSPHEPHRPTSERRPTRTRHAKHPTTRNRSTHRTVHTASATDQHHSTHRQTGQHRTQDSRNDRTRTRKTNDRTRQSRRNSNTKHGTPPKTNTHNRFFLPLRLSLFSSMRPVSRVAIGVWGVPR
>CP025929.1|AUS35924.1|111658_111877_+|hypothetical-protein
MNPIDLKAVLPSVGCLCGEVSPHPSATKVLIAVSLSPPPVPPRGEAFSQQSYFNYGVKGGYFRKEIGFLKNF
>CP025929.1|AUS35925.1|112166_112508_+|hypothetical-protein
MFEVINGKNSGFLGNSKIYIGRANKSYLLKGSVLQNRFVIGRDGNREEVVAKYRQWLWQEVQKRGEVFDELVRIAERVKKGETVQLACWCKPLKCHGDVVKSCVEWMIKEGIV
>CP025929.1|AUS35926.1|112579_113662_+|hypothetical-protein
MTFINPKELGLYAPKTNERVKLAAEAQKFINQALYDYKQLFYGLRLIAWYERDKRAIFYEALTKGELDQFKVAPGHRASDGSYTKDEWDYDRLNAYMWNRFRERFDAAFDLEKIAELKTLKDIKQATDELLEFALTNWKSAILGDDKHQDEPRVEPIGKGVTSCKLEYEGIMIEGSFRSEERILTLRTQGLPEVIIRQVRGETSWKGDIHFDPFGQVVVMNSKKAELFSQVLALAARLNLGIKEFMDDPEGFLGIESPKSRQHARQRVKQRLLEINQNHYERRKAEAGSRPVTRPLNDDIDATPDSDEPTLKEPRKSPNTPIKSGKRKTDRKREAEEWLKNNPEFSEDVDAQMGITSIHT
>CP025929.1|AUS35927.1|113724_114096_+|hypothetical-protein
MRTAIFFWQDAEQIPILKSLIQEALHLGYTRFLTAIFLENDRGLVFSIEAESIDDFPLDNLFRADRVLLVDDPLLWLSDRGERVFAVWDGSEGETLTCLGFLKAWGLPGNYVNPYRTFTIETI

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP025929_1	1.1\|622\|37\|CP025929\|PILER-CR,CRISPRCasFinder,CRT	622-658	37	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	622-658	0	1.0
CP025929_1	1.2\|694\|42\|CP025929\|PILER-CR,CRISPRCasFinder,CRT	694-735	42	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	694-735	0	1.0
CP025929_1	1.3\|771\|38\|CP025929\|PILER-CR,CRISPRCasFinder,CRT	771-808	38	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	771-808	0	1.0
CP025929_1	1.4\|844\|35\|CP025929\|PILER-CR,CRISPRCasFinder,CRT	844-878	35	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	844-878	0	1.0
CP025929_1	1.5\|914\|34\|CP025929\|PILER-CR,CRISPRCasFinder,CRT	914-947	34	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	914-947	0	1.0
CP025929_1	1.6\|983\|41\|CP025929\|PILER-CR,CRISPRCasFinder,CRT	983-1023	41	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	983-1023	0	1.0
CP025929_1	1.7\|1059\|41\|CP025929\|PILER-CR,CRISPRCasFinder,CRT	1059-1099	41	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	1059-1099	0	1.0
CP025929_1	1.8\|1135\|46\|CP025929\|PILER-CR,CRISPRCasFinder,CRT	1135-1180	46	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	1135-1180	0	1.0
CP025929_1	1.9\|1216\|39\|CP025929\|PILER-CR,CRISPRCasFinder,CRT	1216-1254	39	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	1216-1254	0	1.0
CP025929_1	1.10\|1290\|37\|CP025929\|PILER-CR,CRISPRCasFinder,CRT	1290-1326	37	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	1290-1326	0	1.0
CP025929_1	1.11\|1362\|33\|CP025929\|PILER-CR,CRISPRCasFinder,CRT	1362-1394	33	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	1362-1394	0	1.0
CP025929_1	1.12\|1430\|41\|CP025929\|PILER-CR,CRISPRCasFinder,CRT	1430-1470	41	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	1430-1470	0	1.0
CP025929_1	1.13\|1506\|38\|CP025929\|PILER-CR,CRISPRCasFinder,CRT	1506-1543	38	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	1506-1543	0	1.0
CP025929_1	1.14\|1579\|40\|CP025929\|PILER-CR,CRISPRCasFinder,CRT	1579-1618	40	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	1579-1618	0	1.0
CP025929_1	1.15\|1654\|35\|CP025929\|PILER-CR,CRISPRCasFinder,CRT	1654-1688	35	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	1654-1688	0	1.0
CP025929_1	1.16\|1724\|47\|CP025929\|PILER-CR,CRISPRCasFinder,CRT	1724-1770	47	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	1724-1770	0	1.0
CP025929_1	1.17\|1806\|34\|CP025929\|PILER-CR,CRISPRCasFinder,CRT	1806-1839	34	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	1806-1839	0	1.0
CP025929_1	1.18\|1875\|39\|CP025929\|PILER-CR,CRISPRCasFinder,CRT	1875-1913	39	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	1875-1913	0	1.0
CP025929_1	1.19\|1949\|37\|CP025929\|PILER-CR,CRISPRCasFinder,CRT	1949-1985	37	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	1949-1985	0	1.0
CP025929_1	1.20\|2021\|36\|CP025929\|PILER-CR,CRISPRCasFinder,CRT	2021-2056	36	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	2021-2056	0	1.0
CP025929_1	1.21\|2092\|38\|CP025929\|PILER-CR,CRISPRCasFinder,CRT	2092-2129	38	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	2092-2129	0	1.0
CP025929_1	1.22\|2165\|33\|CP025929\|PILER-CR,CRISPRCasFinder,CRT	2165-2197	33	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	2165-2197	0	1.0
CP025929_2	2.1\|3456\|40\|CP025929\|CRISPRCasFinder,CRT	3456-3495	40	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	3456-3495	0	1.0
CP025929_2	2.2\|3531\|36\|CP025929\|CRISPRCasFinder,CRT	3531-3566	36	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	3531-3566	0	1.0
CP025929_2	2.3\|3602\|42\|CP025929\|CRISPRCasFinder,CRT	3602-3643	42	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	3602-3643	0	1.0
CP025929_2	2.4\|3679\|33\|CP025929\|CRISPRCasFinder,CRT	3679-3711	33	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	3679-3711	0	1.0
CP025929_2	2.5\|3747\|38\|CP025929\|CRISPRCasFinder,CRT	3747-3784	38	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	3747-3784	0	1.0
CP025929_2	2.6\|3820\|41\|CP025929\|CRISPRCasFinder,CRT	3820-3860	41	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	3820-3860	0	1.0
CP025929_2	2.7\|3896\|34\|CP025929\|CRISPRCasFinder,CRT	3896-3929	34	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	3896-3929	0	1.0
CP025929_2	2.8\|3456\|41\|CP025929\|PILER-CR	3456-3496	41	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	3456-3496	0	1.0
CP025929_2	2.9\|3531\|37\|CP025929\|PILER-CR	3531-3567	37	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	3531-3567	0	1.0
CP025929_2	2.10\|3602\|43\|CP025929\|PILER-CR	3602-3644	43	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	3602-3644	0	1.0
CP025929_2	2.11\|3679\|34\|CP025929\|PILER-CR	3679-3712	34	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	3679-3712	0	1.0
CP025929_2	2.12\|3747\|39\|CP025929\|PILER-CR	3747-3785	39	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	3747-3785	0	1.0
CP025929_2	2.13\|3820\|42\|CP025929\|PILER-CR	3820-3861	42	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	3820-3861	0	1.0
CP025929_2	2.14\|3896\|35\|CP025929\|PILER-CR	3896-3930	35	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	3896-3930	0	1.0
CP025929_3	3.1\|5320\|48\|CP025929\|PILER-CR,CRISPRCasFinder,CRT	5320-5367	48	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	5320-5367	0	1.0
CP025929_3	3.2\|5403\|35\|CP025929\|PILER-CR,CRISPRCasFinder,CRT	5403-5437	35	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	5403-5437	0	1.0
CP025929_3	3.3\|5473\|36\|CP025929\|PILER-CR,CRISPRCasFinder,CRT	5473-5508	36	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	5473-5508	0	1.0
CP025929_3	3.4\|5544\|33\|CP025929\|PILER-CR,CRISPRCasFinder,CRT	5544-5576	33	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	5544-5576	0	1.0
CP025929_3	3.5\|5612\|36\|CP025929\|PILER-CR,CRISPRCasFinder,CRT	5612-5647	36	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	5612-5647	0	1.0
CP025929_3	3.6\|5683\|36\|CP025929\|PILER-CR,CRISPRCasFinder,CRT	5683-5718	36	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	5683-5718	0	1.0
CP025929_3	3.7\|5754\|37\|CP025929\|PILER-CR,CRISPRCasFinder,CRT	5754-5790	37	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	5754-5790	0	1.0
CP025929_3	3.8\|5826\|37\|CP025929\|PILER-CR,CRISPRCasFinder,CRT	5826-5862	37	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	5826-5862	0	1.0
CP025929_3	3.9\|5898\|34\|CP025929\|PILER-CR,CRISPRCasFinder,CRT	5898-5931	34	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	5898-5931	0	1.0
CP025929_3	3.10\|5967\|31\|CP025929\|PILER-CR,CRISPRCasFinder,CRT	5967-5997	31	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	5967-5997	0	1.0
CP025929_3	3.11\|6033\|42\|CP025929\|CRISPRCasFinder,CRT	6033-6074	42	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	6033-6074	0	1.0
CP025929_4	4.1\|23226\|39\|CP025929\|PILER-CR,CRISPRCasFinder,CRT	23226-23264	39	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	23226-23264	0	1.0
CP025929_4	4.2\|23300\|49\|CP025929\|PILER-CR,CRISPRCasFinder,CRT	23300-23348	49	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	23300-23348	0	1.0
CP025929_4	4.3\|23384\|40\|CP025929\|PILER-CR,CRISPRCasFinder,CRT	23384-23423	40	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	23384-23423	0	1.0
CP025929_4	4.4\|23459\|38\|CP025929\|PILER-CR,CRISPRCasFinder,CRT	23459-23496	38	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	23459-23496	0	1.0
CP025929_4	4.5\|23532\|39\|CP025929\|PILER-CR,CRISPRCasFinder,CRT	23532-23570	39	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	23532-23570	0	1.0
CP025929_4	4.6\|23606\|41\|CP025929\|PILER-CR,CRISPRCasFinder,CRT	23606-23646	41	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	23606-23646	0	1.0
CP025929_4	4.7\|23682\|38\|CP025929\|PILER-CR,CRISPRCasFinder,CRT	23682-23719	38	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	23682-23719	0	1.0
CP025929_4	4.8\|23755\|43\|CP025929\|PILER-CR,CRISPRCasFinder,CRT	23755-23797	43	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	23755-23797	0	1.0
CP025929_4	4.9\|23833\|42\|CP025929\|PILER-CR,CRISPRCasFinder,CRT	23833-23874	42	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	23833-23874	0	1.0
CP025929_4	4.10\|23910\|43\|CP025929\|PILER-CR,CRISPRCasFinder,CRT	23910-23952	43	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	23910-23952	0	1.0
CP025929_4	4.11\|23988\|34\|CP025929\|PILER-CR,CRISPRCasFinder,CRT	23988-24021	34	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	23988-24021	0	1.0
CP025929_4	4.12\|24057\|33\|CP025929\|CRISPRCasFinder,CRT	24057-24089	33	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	24057-24089	0	1.0
CP025929_4	4.13\|24125\|33\|CP025929\|CRISPRCasFinder,CRT	24125-24157	33	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	24125-24157	0	1.0
CP025929_4	4.14\|24193\|43\|CP025929\|CRISPRCasFinder,CRT,PILER-CR	24193-24235	43	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	24193-24235	0	1.0
CP025929_4	4.15\|24271\|43\|CP025929\|CRISPRCasFinder,CRT,PILER-CR	24271-24313	43	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	24271-24313	0	1.0
CP025929_4	4.16\|24349\|39\|CP025929\|CRISPRCasFinder,CRT,PILER-CR	24349-24387	39	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	24349-24387	0	1.0
CP025929_4	4.17\|24423\|35\|CP025929\|CRISPRCasFinder,CRT,PILER-CR	24423-24457	35	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	24423-24457	0	1.0
CP025929_4	4.18\|24493\|42\|CP025929\|CRISPRCasFinder,CRT,PILER-CR	24493-24534	42	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	24493-24534	0	1.0
CP025929_4	4.19\|24570\|38\|CP025929\|CRISPRCasFinder,CRT,PILER-CR	24570-24607	38	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	24570-24607	0	1.0
CP025929_4	4.20\|24643\|39\|CP025929\|CRISPRCasFinder,CRT,PILER-CR	24643-24681	39	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	24643-24681	0	1.0
CP025929_4	4.21\|24717\|40\|CP025929\|CRISPRCasFinder,CRT,PILER-CR	24717-24756	40	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	24717-24756	0	1.0
CP025929_4	4.22\|24792\|35\|CP025929\|CRISPRCasFinder,CRT,PILER-CR	24792-24826	35	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	24792-24826	0	1.0
CP025929_4	4.23\|24862\|43\|CP025929\|CRISPRCasFinder,CRT,PILER-CR	24862-24904	43	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	24862-24904	0	1.0
CP025929_4	4.24\|24940\|35\|CP025929\|CRISPRCasFinder,CRT,PILER-CR	24940-24974	35	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	24940-24974	0	1.0
CP025929_4	4.25\|25010\|39\|CP025929\|CRISPRCasFinder,CRT,PILER-CR	25010-25048	39	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	25010-25048	0	1.0
CP025929_4	4.26\|25084\|36\|CP025929\|CRISPRCasFinder,CRT,PILER-CR	25084-25119	36	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	25084-25119	0	1.0
CP025929_4	4.27\|25155\|40\|CP025929\|CRISPRCasFinder,CRT,PILER-CR	25155-25194	40	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	25155-25194	0	1.0
CP025929_4	4.28\|25230\|40\|CP025929\|CRISPRCasFinder,CRT,PILER-CR	25230-25269	40	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	25230-25269	0	1.0
CP025929_4	4.29\|25305\|43\|CP025929\|CRISPRCasFinder,CRT,PILER-CR	25305-25347	43	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	25305-25347	0	1.0
CP025929_4	4.30\|25383\|35\|CP025929\|CRISPRCasFinder,CRT,PILER-CR	25383-25417	35	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	25383-25417	0	1.0
CP025929_4	4.31\|25453\|34\|CP025929\|CRISPRCasFinder,CRT,PILER-CR	25453-25486	34	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	25453-25486	0	1.0
CP025929_4	4.32\|25522\|37\|CP025929\|CRISPRCasFinder,CRT,PILER-CR	25522-25558	37	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	25522-25558	0	1.0
CP025929_4	4.33\|25594\|39\|CP025929\|CRISPRCasFinder,CRT,PILER-CR	25594-25632	39	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	25594-25632	0	1.0
CP025929_4	4.34\|25668\|36\|CP025929\|CRISPRCasFinder,CRT,PILER-CR	25668-25703	36	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	25668-25703	0	1.0
CP025929_4	4.35\|25739\|37\|CP025929\|CRISPRCasFinder,CRT,PILER-CR	25739-25775	37	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	25739-25775	0	1.0
CP025929_4	4.36\|25811\|32\|CP025929\|CRISPRCasFinder,CRT,PILER-CR	25811-25842	32	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	25811-25842	0	1.0
CP025929_4	4.37\|25878\|44\|CP025929\|CRISPRCasFinder,CRT,PILER-CR	25878-25921	44	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	25878-25921	0	1.0
CP025929_4	4.38\|25957\|33\|CP025929\|CRISPRCasFinder,CRT,PILER-CR	25957-25989	33	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	25957-25989	0	1.0
CP025929_4	4.39\|26025\|35\|CP025929\|CRISPRCasFinder,CRT,PILER-CR	26025-26059	35	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	26025-26059	0	1.0
CP025929_4	4.40\|26095\|38\|CP025929\|CRISPRCasFinder,CRT,PILER-CR	26095-26132	38	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	26095-26132	0	1.0
CP025929_4	4.41\|26168\|40\|CP025929\|CRISPRCasFinder,CRT,PILER-CR	26168-26207	40	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	26168-26207	0	1.0
CP025929_4	4.42\|26243\|40\|CP025929\|CRISPRCasFinder,CRT,PILER-CR	26243-26282	40	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	26243-26282	0	1.0
CP025929_4	4.43\|26318\|34\|CP025929\|CRISPRCasFinder,CRT,PILER-CR	26318-26351	34	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	26318-26351	0	1.0
CP025929_4	4.44\|26387\|38\|CP025929\|CRISPRCasFinder,CRT,PILER-CR	26387-26424	38	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	26387-26424	0	1.0
CP025929_4	4.45\|26460\|40\|CP025929\|CRISPRCasFinder,CRT,PILER-CR	26460-26499	40	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	26460-26499	0	1.0
CP025929_4	4.46\|26535\|39\|CP025929\|CRISPRCasFinder,CRT,PILER-CR	26535-26573	39	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	26535-26573	0	1.0
CP025929_4	4.47\|26609\|40\|CP025929\|CRISPRCasFinder,CRT,PILER-CR	26609-26648	40	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	26609-26648	0	1.0
CP025929_4	4.48\|26684\|35\|CP025929\|CRISPRCasFinder,CRT,PILER-CR	26684-26718	35	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	26684-26718	0	1.0
CP025929_4	4.49\|26754\|38\|CP025929\|CRISPRCasFinder,CRT,PILER-CR	26754-26791	38	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	26754-26791	0	1.0
CP025929_4	4.50\|26827\|38\|CP025929\|CRISPRCasFinder,CRT,PILER-CR	26827-26864	38	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	26827-26864	0	1.0
CP025929_4	4.51\|26900\|40\|CP025929\|CRISPRCasFinder,CRT,PILER-CR	26900-26939	40	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	26900-26939	0	1.0
CP025929_4	4.52\|26975\|38\|CP025929\|CRISPRCasFinder,CRT	26975-27012	38	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	26975-27012	0	1.0
CP025929_5	5.1\|60561\|41\|CP025929\|CRISPRCasFinder	60561-60601	41	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	60561-60601	0	1.0
CP025929_6	6.1\|105454\|36\|CP025929\|CRT	105454-105489	36	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	105454-105489	0	1.0
CP025929_6	6.2\|105527\|34\|CP025929\|CRT,PILER-CR,CRISPRCasFinder	105527-105560	34	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	105527-105560	0	1.0
CP025929_6	6.3\|105598\|35\|CP025929\|CRT,PILER-CR,CRISPRCasFinder	105598-105632	35	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	105598-105632	0	1.0
CP025929_6	6.4\|105670\|37\|CP025929\|CRT,PILER-CR,CRISPRCasFinder	105670-105706	37	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	105670-105706	0	1.0
CP025929_6	6.5\|105744\|35\|CP025929\|CRT,PILER-CR,CRISPRCasFinder	105744-105778	35	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	105744-105778	0	1.0
CP025929_6	6.6\|105816\|36\|CP025929\|CRT,PILER-CR,CRISPRCasFinder	105816-105851	36	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	105816-105851	0	1.0
CP025929_6	6.7\|105889\|36\|CP025929\|CRT,PILER-CR,CRISPRCasFinder	105889-105924	36	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	105889-105924	0	1.0
CP025929_6	6.8\|105962\|36\|CP025929\|CRT,PILER-CR,CRISPRCasFinder	105962-105997	36	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	105962-105997	0	1.0
CP025929_6	6.9\|106035\|36\|CP025929\|CRT,PILER-CR,CRISPRCasFinder	106035-106070	36	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	106035-106070	0	1.0
CP025929_6	6.10\|106108\|36\|CP025929\|CRT,PILER-CR,CRISPRCasFinder	106108-106143	36	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	106108-106143	0	1.0
CP025929_6	6.11\|106181\|34\|CP025929\|CRT,PILER-CR,CRISPRCasFinder	106181-106214	34	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	106181-106214	0	1.0
CP025929_6	6.12\|106252\|35\|CP025929\|CRT,PILER-CR,CRISPRCasFinder	106252-106286	35	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	106252-106286	0	1.0
CP025929_6	6.13\|106324\|40\|CP025929\|CRT,PILER-CR,CRISPRCasFinder	106324-106363	40	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	106324-106363	0	1.0
CP025929_6	6.14\|106401\|35\|CP025929\|CRT,PILER-CR,CRISPRCasFinder	106401-106435	35	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	106401-106435	0	1.0
CP025929_6	6.15\|106473\|34\|CP025929\|CRT,PILER-CR,CRISPRCasFinder	106473-106506	34	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	106473-106506	0	1.0
CP025929_6	6.16\|106544\|36\|CP025929\|CRT,PILER-CR,CRISPRCasFinder	106544-106579	36	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	106544-106579	0	1.0
CP025929_6	6.17\|106617\|35\|CP025929\|CRT,PILER-CR,CRISPRCasFinder	106617-106651	35	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	106617-106651	0	1.0
CP025929_6	6.18\|106689\|37\|CP025929\|CRT,PILER-CR,CRISPRCasFinder	106689-106725	37	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	106689-106725	0	1.0
CP025929_6	6.19\|106763\|35\|CP025929\|CRT,PILER-CR,CRISPRCasFinder	106763-106797	35	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	106763-106797	0	1.0
CP025929_6	6.20\|106835\|36\|CP025929\|CRT,PILER-CR,CRISPRCasFinder	106835-106870	36	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	106835-106870	0	1.0
CP025929_6	6.21\|106908\|36\|CP025929\|CRT,PILER-CR,CRISPRCasFinder	106908-106943	36	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	106908-106943	0	1.0
CP025929_6	6.22\|106981\|34\|CP025929\|CRT,PILER-CR,CRISPRCasFinder	106981-107014	34	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	106981-107014	0	1.0
CP025929_6	6.23\|107052\|34\|CP025929\|CRT,PILER-CR,CRISPRCasFinder	107052-107085	34	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	107052-107085	0	1.0
CP025929_6	6.23\|107052\|34\|CP025929\|CRT,PILER-CR,CRISPRCasFinder	107052-107085	34	LC425525	Uncultured phage DNA, contig: NODE869	4554-4587	2	0.941
CP025929_6	6.22\|106981\|34\|CP025929\|CRT,PILER-CR,CRISPRCasFinder	106981-107014	34	LC425515	Uncultured phage DNA, contig: NODE375	16834-16867	3	0.912
CP025929_4	4.38\|25957\|33\|CP025929\|CRISPRCasFinder,CRT,PILER-CR	25957-25989	33	AP017628	Pleomorphomonas sp. SM30 plasmid pSM30-2 DNA, complete genome	10790-10822	9	0.727
CP025929_1	1.4\|844\|35\|CP025929\|PILER-CR,CRISPRCasFinder,CRT	844-878	35	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	5746-5780	10	0.714
CP025929_4	4.31\|25453\|34\|CP025929\|CRISPRCasFinder,CRT,PILER-CR	25453-25486	34	NZ_CP042265	Litoreibacter sp. LN3S51 plasmid unnamed4, complete sequence	511140-511173	10	0.706
CP025929_4	4.31\|25453\|34\|CP025929\|CRISPRCasFinder,CRT,PILER-CR	25453-25486	34	NZ_CP021133	Pseudomonas fragi strain NMC25 plasmid unnamed1, complete sequence	46700-46733	10	0.706
CP025929_4	4.36\|25811\|32\|CP025929\|CRISPRCasFinder,CRT,PILER-CR	25811-25842	32	MK448865	Streptococcus phage Javan182, complete genome	14122-14153	10	0.688
CP025929_3	3.7\|5754\|37\|CP025929\|PILER-CR,CRISPRCasFinder,CRT	5754-5790	37	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	852-888	11	0.703
CP025929_4	4.36\|25811\|32\|CP025929\|CRISPRCasFinder,CRT,PILER-CR	25811-25842	32	MK448701	Streptococcus phage Javan197, complete genome	16212-16243	11	0.656
CP025929_4	4.36\|25811\|32\|CP025929\|CRISPRCasFinder,CRT,PILER-CR	25811-25842	32	MK448869	Streptococcus phage Javan190, complete genome	16213-16244	11	0.656
CP025929_4	4.36\|25811\|32\|CP025929\|CRISPRCasFinder,CRT,PILER-CR	25811-25842	32	MK448870	Streptococcus phage Javan192, complete genome	16213-16244	11	0.656
CP025929_4	4.7\|23682\|38\|CP025929\|PILER-CR,CRISPRCasFinder,CRT	23682-23719	38	MK448946	Streptococcus phage Javan456, complete genome	14724-14761	12	0.684
CP025929_4	4.7\|23682\|38\|CP025929\|PILER-CR,CRISPRCasFinder,CRT	23682-23719	38	MK448871	Streptococcus phage Javan196, complete genome	11817-11854	12	0.684
CP025929_4	4.7\|23682\|38\|CP025929\|PILER-CR,CRISPRCasFinder,CRT	23682-23719	38	MK448976	Streptococcus phage Javan528, complete genome	11817-11854	12	0.684
CP025929_4	4.7\|23682\|38\|CP025929\|PILER-CR,CRISPRCasFinder,CRT	23682-23719	38	MK448961	Streptococcus phage Javan494, complete genome	11817-11854	12	0.684
CP025929_4	4.7\|23682\|38\|CP025929\|PILER-CR,CRISPRCasFinder,CRT	23682-23719	38	MK448697	Streptococcus phage Javan185, complete genome	11817-11854	12	0.684
CP025929_4	4.7\|23682\|38\|CP025929\|PILER-CR,CRISPRCasFinder,CRT	23682-23719	38	MK448693	Streptococcus phage Javan177, complete genome	11817-11854	12	0.684
CP025929_4	4.7\|23682\|38\|CP025929\|PILER-CR,CRISPRCasFinder,CRT	23682-23719	38	MK448766	Streptococcus phage Javan465, complete genome	12784-12821	12	0.684
CP025929_4	4.7\|23682\|38\|CP025929\|PILER-CR,CRISPRCasFinder,CRT	23682-23719	38	MK448696	Streptococcus phage Javan183, complete genome	11817-11854	12	0.684
CP025929_4	4.7\|23682\|38\|CP025929\|PILER-CR,CRISPRCasFinder,CRT	23682-23719	38	MK448868	Streptococcus phage Javan188, complete genome	11817-11854	12	0.684
CP025929_4	4.7\|23682\|38\|CP025929\|PILER-CR,CRISPRCasFinder,CRT	23682-23719	38	MK448866	Streptococcus phage Javan184, complete genome	11817-11854	12	0.684
CP025929_4	4.7\|23682\|38\|CP025929\|PILER-CR,CRISPRCasFinder,CRT	23682-23719	38	MK448699	Streptococcus phage Javan189, complete genome	11817-11854	12	0.684
CP025929_4	4.7\|23682\|38\|CP025929\|PILER-CR,CRISPRCasFinder,CRT	23682-23719	38	MK448867	Streptococcus phage Javan186, complete genome	11817-11854	12	0.684

1. spacer 1.1|622|37|CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

cttttttgcggtatttttggttactttgtatcattgt	CRISPR spacer
cttttttgcggtatttttggttactttgtatcattgt	Protospacer
*************************************

2. spacer 1.2|694|42|CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

agatcctttaggagaatttaactctaacgcttgggccgcctc	CRISPR spacer
agatcctttaggagaatttaactctaacgcttgggccgcctc	Protospacer
******************************************

3. spacer 1.3|771|38|CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

aaaagagtaaccgctgtttttgcttgcgttccgaataa	CRISPR spacer
aaaagagtaaccgctgtttttgcttgcgttccgaataa	Protospacer
**************************************

4. spacer 1.4|844|35|CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

gactagttgttctggggcccaaaaagccttgggga	CRISPR spacer
gactagttgttctggggcccaaaaagccttgggga	Protospacer
***********************************

5. spacer 1.5|914|34|CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

aatgcaaccgcggcacccaggacttttgtgccat	CRISPR spacer
aatgcaaccgcggcacccaggacttttgtgccat	Protospacer
**********************************

6. spacer 1.6|983|41|CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

ttttaaagggggggggtgttagtcccctacgatgcataccc	CRISPR spacer
ttttaaagggggggggtgttagtcccctacgatgcataccc	Protospacer
*****************************************

7. spacer 1.7|1059|41|CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

aaaccatcgctttgccacaccaaacaaatctttcgattatg	CRISPR spacer
aaaccatcgctttgccacaccaaacaaatctttcgattatg	Protospacer
*****************************************

8. spacer 1.8|1135|46|CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

gtatgtacacgcccttgagtgcttgctcgtttttactttggggact	CRISPR spacer
gtatgtacacgcccttgagtgcttgctcgtttttactttggggact	Protospacer
**********************************************

9. spacer 1.9|1216|39|CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

gcttaatatcgttctcggctcccttcacttgaattgtaa	CRISPR spacer
gcttaatatcgttctcggctcccttcacttgaattgtaa	Protospacer
***************************************

10. spacer 1.10|1290|37|CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

aaaaaagtgaaaaacaacgcaaaacgcactaaacttt	CRISPR spacer
aaaaaagtgaaaaacaacgcaaaacgcactaaacttt	Protospacer
*************************************

11. spacer 1.11|1362|33|CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

atggtaaatcggggacgccatcaaatccagcgc	CRISPR spacer
atggtaaatcggggacgccatcaaatccagcgc	Protospacer
*********************************

12. spacer 1.12|1430|41|CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

tcccacggtggggagcatgggcccatcccagttgcgggtaa	CRISPR spacer
tcccacggtggggagcatgggcccatcccagttgcgggtaa	Protospacer
*****************************************

13. spacer 1.13|1506|38|CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

tcaccccttgtggtatgacaaagtaaacggtggcattt	CRISPR spacer
tcaccccttgtggtatgacaaagtaaacggtggcattt	Protospacer
**************************************

14. spacer 1.14|1579|40|CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

acatttctgcatagtgtcgaacggcacagtttgctgggaa	CRISPR spacer
acatttctgcatagtgtcgaacggcacagtttgctgggaa	Protospacer
****************************************

15. spacer 1.15|1654|35|CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

agtccttaaggataagcttccagctccataggaga	CRISPR spacer
agtccttaaggataagcttccagctccataggaga	Protospacer
***********************************

16. spacer 1.16|1724|47|CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

ggttaataaaacctaccaaagttttgggtaggtcctccccggagaga	CRISPR spacer
ggttaataaaacctaccaaagttttgggtaggtcctccccggagaga	Protospacer
***********************************************

17. spacer 1.17|1806|34|CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

ctaggagcacagctgcttctgttgtctgccgatt	CRISPR spacer
ctaggagcacagctgcttctgttgtctgccgatt	Protospacer
**********************************

18. spacer 1.18|1875|39|CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

atgaagtgccccatcgcttctactaactcgggcctctct	CRISPR spacer
atgaagtgccccatcgcttctactaactcgggcctctct	Protospacer
***************************************

19. spacer 1.19|1949|37|CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

ggttaatcgtgaaccaagccacgaaaccccgtgtggt	CRISPR spacer
ggttaatcgtgaaccaagccacgaaaccccgtgtggt	Protospacer
*************************************

20. spacer 1.20|2021|36|CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

cacgatttctattgctggagattctcttagaggttc	CRISPR spacer
cacgatttctattgctggagattctcttagaggttc	Protospacer
************************************

21. spacer 1.21|2092|38|CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

aggatttggtcctcgggaagttttacagtggttctttt	CRISPR spacer
aggatttggtcctcgggaagttttacagtggttctttt	Protospacer
**************************************

22. spacer 1.22|2165|33|CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

aatgtacggaacgggcctcaagggttcttccga	CRISPR spacer
aatgtacggaacgggcctcaagggttcttccga	Protospacer
*********************************

23. spacer 2.1|3456|40|CP025929|CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

agtcggggtcgggtcggaggtagcaaagggctatcttttc	CRISPR spacer
agtcggggtcgggtcggaggtagcaaagggctatcttttc	Protospacer
****************************************

24. spacer 2.2|3531|36|CP025929|CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

cttttgttcacaggttttgtgaatccttttagatcc	CRISPR spacer
cttttgttcacaggttttgtgaatccttttagatcc	Protospacer
************************************

25. spacer 2.3|3602|42|CP025929|CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

aaaatgtgcggagaaatgcaccaatagtagacgtccctgaat	CRISPR spacer
aaaatgtgcggagaaatgcaccaatagtagacgtccctgaat	Protospacer
******************************************

26. spacer 2.4|3679|33|CP025929|CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

gtaggttgcgtacaaccaaacggagcccacata	CRISPR spacer
gtaggttgcgtacaaccaaacggagcccacata	Protospacer
*********************************

27. spacer 2.5|3747|38|CP025929|CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

ttaggagacacaaagaccagtagaagatagagtatcac	CRISPR spacer
ttaggagacacaaagaccagtagaagatagagtatcac	Protospacer
**************************************

28. spacer 2.6|3820|41|CP025929|CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgatcgaggtgagcgatcgagtaacggaggttctggtatg	CRISPR spacer
gtgatcgaggtgagcgatcgagtaacggaggttctggtatg	Protospacer
*****************************************

29. spacer 2.7|3896|34|CP025929|CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

gatagctctcaatccggcgggacgcctcgagata	CRISPR spacer
gatagctctcaatccggcgggacgcctcgagata	Protospacer
**********************************

30. spacer 2.8|3456|41|CP025929|PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

agtcggggtcgggtcggaggtagcaaagggctatcttttcc	CRISPR spacer
agtcggggtcgggtcggaggtagcaaagggctatcttttcc	Protospacer
*****************************************

31. spacer 2.9|3531|37|CP025929|PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

cttttgttcacaggttttgtgaatccttttagatccc	CRISPR spacer
cttttgttcacaggttttgtgaatccttttagatccc	Protospacer
*************************************

32. spacer 2.10|3602|43|CP025929|PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

aaaatgtgcggagaaatgcaccaatagtagacgtccctgaatc	CRISPR spacer
aaaatgtgcggagaaatgcaccaatagtagacgtccctgaatc	Protospacer
*******************************************

33. spacer 2.11|3679|34|CP025929|PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

gtaggttgcgtacaaccaaacggagcccacatac	CRISPR spacer
gtaggttgcgtacaaccaaacggagcccacatac	Protospacer
**********************************

34. spacer 2.12|3747|39|CP025929|PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

ttaggagacacaaagaccagtagaagatagagtatcacc	CRISPR spacer
ttaggagacacaaagaccagtagaagatagagtatcacc	Protospacer
***************************************

35. spacer 2.13|3820|42|CP025929|PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgatcgaggtgagcgatcgagtaacggaggttctggtatgc	CRISPR spacer
gtgatcgaggtgagcgatcgagtaacggaggttctggtatgc	Protospacer
******************************************

36. spacer 2.14|3896|35|CP025929|PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

gatagctctcaatccggcgggacgcctcgagatac	CRISPR spacer
gatagctctcaatccggcgggacgcctcgagatac	Protospacer
***********************************

37. spacer 3.1|5320|48|CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

ttgccttggcttcatcttccgacaaatccatgcactcttgcatggatt	CRISPR spacer
ttgccttggcttcatcttccgacaaatccatgcactcttgcatggatt	Protospacer
************************************************

38. spacer 3.2|5403|35|CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

aaaattgtactcatcacttgatgacagaactcaac	CRISPR spacer
aaaattgtactcatcacttgatgacagaactcaac	Protospacer
***********************************

39. spacer 3.3|5473|36|CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

tggatgctcaatcgcccatacctgacctgctgacag	CRISPR spacer
tggatgctcaatcgcccatacctgacctgctgacag	Protospacer
************************************

40. spacer 3.4|5544|33|CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

cttctgcaaaacggagaacgatatagtcatcgt	CRISPR spacer
cttctgcaaaacggagaacgatatagtcatcgt	Protospacer
*********************************

41. spacer 3.5|5612|36|CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

tacaaagggagaattgtctcactttttcttttattt	CRISPR spacer
tacaaagggagaattgtctcactttttcttttattt	Protospacer
************************************

42. spacer 3.6|5683|36|CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

gtttagtttccactaaatccgatgcatcttcgacat	CRISPR spacer
gtttagtttccactaaatccgatgcatcttcgacat	Protospacer
************************************

43. spacer 3.7|5754|37|CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

cttttggggcccaaaaggccttggggaagatagcccc	CRISPR spacer
cttttggggcccaaaaggccttggggaagatagcccc	Protospacer
*************************************

44. spacer 3.8|5826|37|CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

gatactccacaataaaggtgttgagatatgatttctc	CRISPR spacer
gatactccacaataaaggtgttgagatatgatttctc	Protospacer
*************************************

45. spacer 3.9|5898|34|CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

aatataggtaacgcttccatacccatattccata	CRISPR spacer
aatataggtaacgcttccatacccatattccata	Protospacer
**********************************

46. spacer 3.10|5967|31|CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

gtctaatgctccgataccgattttctgcaca	CRISPR spacer
gtctaatgctccgataccgattttctgcaca	Protospacer
*******************************

47. spacer 3.11|6033|42|CP025929|CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

gtttgcacacgcaaccaaaacaaaaacccaaaacagaagaca	CRISPR spacer
gtttgcacacgcaaccaaaacaaaaacccaaaacagaagaca	Protospacer
******************************************

48. spacer 4.1|23226|39|CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

ttacattttgggcggggcgagtataatcatcaaaccgct	CRISPR spacer
ttacattttgggcggggcgagtataatcatcaaaccgct	Protospacer
***************************************

49. spacer 4.2|23300|49|CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

gctcctctggatacagaggagtaagccagcgtagtcggcttccttctgt	CRISPR spacer
gctcctctggatacagaggagtaagccagcgtagtcggcttccttctgt	Protospacer
*************************************************

50. spacer 4.3|23384|40|CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

cattttggttggttttaaagagctccagctcatcccttct	CRISPR spacer
cattttggttggttttaaagagctccagctcatcccttct	Protospacer
****************************************

51. spacer 4.4|23459|38|CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

tgccgccgtcgggctgctccttgatgttaaacacgggt	CRISPR spacer
tgccgccgtcgggctgctccttgatgttaaacacgggt	Protospacer
**************************************

52. spacer 4.5|23532|39|CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

gtctccatgttgtccattgtgaaattttttcccatacag	CRISPR spacer
gtctccatgttgtccattgtgaaattttttcccatacag	Protospacer
***************************************

53. spacer 4.6|23606|41|CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

tttttccattccccttcgggatcgggatcgggatcgggatc	CRISPR spacer
tttttccattccccttcgggatcgggatcgggatcgggatc	Protospacer
*****************************************

54. spacer 4.7|23682|38|CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

gacagcgaggtttttccaacttgaaaaataaaaaaccc	CRISPR spacer
gacagcgaggtttttccaacttgaaaaataaaaaaccc	Protospacer
**************************************

55. spacer 4.8|23755|43|CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

tgggttagaatttcctcgacgcccggtgacgtgaggaaatcaa	CRISPR spacer
tgggttagaatttcctcgacgcccggtgacgtgaggaaatcaa	Protospacer
*******************************************

56. spacer 4.9|23833|42|CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

ctttttttatcatactttgattctactacttggtatccaatt	CRISPR spacer
ctttttttatcatactttgattctactacttggtatccaatt	Protospacer
******************************************

57. spacer 4.10|23910|43|CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

ccggagggccggggggttagggttttactctgctgtatctttt	CRISPR spacer
ccggagggccggggggttagggttttactctgctgtatctttt	Protospacer
*******************************************

58. spacer 4.11|23988|34|CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

ttctaaactacgcttggcaaggctttttgagcac	CRISPR spacer
ttctaaactacgcttggcaaggctttttgagcac	Protospacer
**********************************

59. spacer 4.12|24057|33|CP025929|CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtgcttttttaagcacaaacaaccaaattgt	CRISPR spacer
ctgtgcttttttaagcacaaacaaccaaattgt	Protospacer
*********************************

60. spacer 4.13|24125|33|CP025929|CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

gttttttggcggcgttgtatcttcccatagaag	CRISPR spacer
gttttttggcggcgttgtatcttcccatagaag	Protospacer
*********************************

61. spacer 4.14|24193|43|CP025929|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

cacgagcccaccaaacggtgaatctgtgcagtggttcttaaaa	CRISPR spacer
cacgagcccaccaaacggtgaatctgtgcagtggttcttaaaa	Protospacer
*******************************************

62. spacer 4.15|24271|43|CP025929|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

ggttgtatcgcacagaactcactattctttgctaccgtgccat	CRISPR spacer
ggttgtatcgcacagaactcactattctttgctaccgtgccat	Protospacer
*******************************************

63. spacer 4.16|24349|39|CP025929|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

gattggaggttcgctcctttcaattcttccactaaaact	CRISPR spacer
gattggaggttcgctcctttcaattcttccactaaaact	Protospacer
***************************************

64. spacer 4.17|24423|35|CP025929|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

gaagtcgtctacccagaacatgaaaccgaaacata	CRISPR spacer
gaagtcgtctacccagaacatgaaaccgaaacata	Protospacer
***********************************

65. spacer 4.18|24493|42|CP025929|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

atcccatccttcgccatcgaccaatctttcgataaaggctaa	CRISPR spacer
atcccatccttcgccatcgaccaatctttcgataaaggctaa	Protospacer
******************************************

66. spacer 4.19|24570|38|CP025929|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

cctcacaagggggtggagaagagggggcggggataaga	CRISPR spacer
cctcacaagggggtggagaagagggggcggggataaga	Protospacer
**************************************

67. spacer 4.20|24643|39|CP025929|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

tttgctcccctgtacacgaagggttactttccccggaaa	CRISPR spacer
tttgctcccctgtacacgaagggttactttccccggaaa	Protospacer
***************************************

68. spacer 4.21|24717|40|CP025929|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

gttatgatttctcctgtttgtgttttgttttactgataac	CRISPR spacer
gttatgatttctcctgtttgtgttttgttttactgataac	Protospacer
****************************************

69. spacer 4.22|24792|35|CP025929|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

gagggatactattatttccacttttggcacttcgg	CRISPR spacer
gagggatactattatttccacttttggcacttcgg	Protospacer
***********************************

70. spacer 4.23|24862|43|CP025929|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

actgttttggatgccttcagttcccgtcatggtgtcgacataa	CRISPR spacer
actgttttggatgccttcagttcccgtcatggtgtcgacataa	Protospacer
*******************************************

71. spacer 4.24|24940|35|CP025929|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

tttgtcgggagcagtacccccagggagctcttcgt	CRISPR spacer
tttgtcgggagcagtacccccagggagctcttcgt	Protospacer
***********************************

72. spacer 4.25|25010|39|CP025929|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

catcccagttgcgggtaacggcgctctccttaaaggaga	CRISPR spacer
catcccagttgcgggtaacggcgctctccttaaaggaga	Protospacer
***************************************

73. spacer 4.26|25084|36|CP025929|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

tgtttccaaccaattttgctgattttgggctgagtt	CRISPR spacer
tgtttccaaccaattttgctgattttgggctgagtt	Protospacer
************************************

74. spacer 4.27|25155|40|CP025929|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

ccaagccgtaaagtccaaaatccaggacaacagccgtcgt	CRISPR spacer
ccaagccgtaaagtccaaaatccaggacaacagccgtcgt	Protospacer
****************************************

75. spacer 4.28|25230|40|CP025929|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

gctggggagggtagaacgctaacttgttgtcgcacaagaa	CRISPR spacer
gctggggagggtagaacgctaacttgttgtcgcacaagaa	Protospacer
****************************************

76. spacer 4.29|25305|43|CP025929|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

gctaaagtcaccaagaaaatgaagggactccttctcgtcattt	CRISPR spacer
gctaaagtcaccaagaaaatgaagggactccttctcgtcattt	Protospacer
*******************************************

77. spacer 4.30|25383|35|CP025929|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

aaaagactattcctgctattatgacgcctactatg	CRISPR spacer
aaaagactattcctgctattatgacgcctactatg	Protospacer
***********************************

78. spacer 4.31|25453|34|CP025929|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaacaaaaacagacaacggcatttttttcatg	CRISPR spacer
gagaacaaaaacagacaacggcatttttttcatg	Protospacer
**********************************

79. spacer 4.32|25522|37|CP025929|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtggaattgtcccagatatccccacttaagcgagg	CRISPR spacer
ctgtggaattgtcccagatatccccacttaagcgagg	Protospacer
*************************************

80. spacer 4.33|25594|39|CP025929|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

acaacgaaatagattctttctatttcgtctttgatagtt	CRISPR spacer
acaacgaaatagattctttctatttcgtctttgatagtt	Protospacer
***************************************

81. spacer 4.34|25668|36|CP025929|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

tgagtaaaagccaccgccaacgctcgattaatgcga	CRISPR spacer
tgagtaaaagccaccgccaacgctcgattaatgcga	Protospacer
************************************

82. spacer 4.35|25739|37|CP025929|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

tgtcatttactgtgagttctggtcccggatagttgac	CRISPR spacer
tgtcatttactgtgagttctggtcccggatagttgac	Protospacer
*************************************

83. spacer 4.36|25811|32|CP025929|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

gaaaaaccattactgccgctactggcaagagg	CRISPR spacer
gaaaaaccattactgccgctactggcaagagg	Protospacer
********************************

84. spacer 4.37|25878|44|CP025929|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

ccctggtaggctttacccgtgatccaggtttccaaaatggaacc	CRISPR spacer
ccctggtaggctttacccgtgatccaggtttccaaaatggaacc	Protospacer
********************************************

85. spacer 4.38|25957|33|CP025929|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

caacaaaattccctttgtcgcccaagctgcagt	CRISPR spacer
caacaaaattccctttgtcgcccaagctgcagt	Protospacer
*********************************

86. spacer 4.39|26025|35|CP025929|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgaaaaaccgcgagttctaaggcatccttatctc	CRISPR spacer
gtgaaaaaccgcgagttctaaggcatccttatctc	Protospacer
***********************************

87. spacer 4.40|26095|38|CP025929|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtgacctcttgttcaagcactacacattgaattgaat	CRISPR spacer
cgtgacctcttgttcaagcactacacattgaattgaat	Protospacer
**************************************

88. spacer 4.41|26168|40|CP025929|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

tcagtaatggccgtgtattctagatattcctctagaccat	CRISPR spacer
tcagtaatggccgtgtattctagatattcctctagaccat	Protospacer
****************************************

89. spacer 4.42|26243|40|CP025929|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

tcgttttttactaccaaggcgaaccctgcgaagtttagca	CRISPR spacer
tcgttttttactaccaaggcgaaccctgcgaagtttagca	Protospacer
****************************************

90. spacer 4.43|26318|34|CP025929|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtgcgtacgatttgcacaacttaaacttaccgc	CRISPR spacer
cgtgcgtacgatttgcacaacttaaacttaccgc	Protospacer
**********************************

91. spacer 4.44|26387|38|CP025929|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

agtagcagcagcagttaaaccgatggtggtatagattt	CRISPR spacer
agtagcagcagcagttaaaccgatggtggtatagattt	Protospacer
**************************************

92. spacer 4.45|26460|40|CP025929|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

ggatacaccgtggtgcatcctatgcgtttcctacgtgatc	CRISPR spacer
ggatacaccgtggtgcatcctatgcgtttcctacgtgatc	Protospacer
****************************************

93. spacer 4.46|26535|39|CP025929|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

ttccgcgtatcgcgttttggacacatatagtccattcaa	CRISPR spacer
ttccgcgtatcgcgttttggacacatatagtccattcaa	Protospacer
***************************************

94. spacer 4.47|26609|40|CP025929|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

accacaccaacttccccgtcaaggaaagcatttgtggagc	CRISPR spacer
accacaccaacttccccgtcaaggaaagcatttgtggagc	Protospacer
****************************************

95. spacer 4.48|26684|35|CP025929|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

accggaagggtcagtgacagcgtgtgtttctcagg	CRISPR spacer
accggaagggtcagtgacagcgtgtgtttctcagg	Protospacer
***********************************

96. spacer 4.49|26754|38|CP025929|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

taaggtatgggtggactatcaaaaaaatcaattgaatt	CRISPR spacer
taaggtatgggtggactatcaaaaaaatcaattgaatt	Protospacer
**************************************

97. spacer 4.50|26827|38|CP025929|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

acgatacgagaagggattgggatgctggcaaggacagc	CRISPR spacer
acgatacgagaagggattgggatgctggcaaggacagc	Protospacer
**************************************

98. spacer 4.51|26900|40|CP025929|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

atgggcctccccatacggtcagaatgatggcggctgcaaa	CRISPR spacer
atgggcctccccatacggtcagaatgatggcggctgcaaa	Protospacer
****************************************

99. spacer 4.52|26975|38|CP025929|CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

gtcaaaacactgtacacctttccaaactttggatacca	CRISPR spacer
gtcaaaacactgtacacctttccaaactttggatacca	Protospacer
**************************************

100. spacer 5.1|60561|41|CP025929|CRISPRCasFinder matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

cagaatcgagaaacacagcgagaaaacaagcgagagtgttg	CRISPR spacer
cagaatcgagaaacacagcgagaaaacaagcgagagtgttg	Protospacer
*****************************************

101. spacer 6.1|105454|36|CP025929|CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

gctcagatcataagtagcaacaattgaccggtgaaa	CRISPR spacer
gctcagatcataagtagcaacaattgaccggtgaaa	Protospacer
************************************

102. spacer 6.2|105527|34|CP025929|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgatccgaggcttgagggagcatcttttcccaa	CRISPR spacer
gtgatccgaggcttgagggagcatcttttcccaa	Protospacer
**********************************

103. spacer 6.3|105598|35|CP025929|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

ccgttataggtgacacggggataagtgatcttgtt	CRISPR spacer
ccgttataggtgacacggggataagtgatcttgtt	Protospacer
***********************************

104. spacer 6.4|105670|37|CP025929|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

ggttaggacacggtaaaccatcgatgattaatctagt	CRISPR spacer
ggttaggacacggtaaaccatcgatgattaatctagt	Protospacer
*************************************

105. spacer 6.5|105744|35|CP025929|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

ttggagacgggagcctctttgtcttttaaccaaag	CRISPR spacer
ttggagacgggagcctctttgtcttttaaccaaag	Protospacer
***********************************

106. spacer 6.6|105816|36|CP025929|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

attaagagatttcccaatctgaggaacgactacaat	CRISPR spacer
attaagagatttcccaatctgaggaacgactacaat	Protospacer
************************************

107. spacer 6.7|105889|36|CP025929|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

aattaatagccgggtgactggggcgactcaggcgga	CRISPR spacer
aattaatagccgggtgactggggcgactcaggcgga	Protospacer
************************************

108. spacer 6.8|105962|36|CP025929|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

actcaatctccccacccaacggtcagacataggaaa	CRISPR spacer
actcaatctccccacccaacggtcagacataggaaa	Protospacer
************************************

109. spacer 6.9|106035|36|CP025929|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

tttgcttaatagtcaaatgagttgttttcagggtta	CRISPR spacer
tttgcttaatagtcaaatgagttgttttcagggtta	Protospacer
************************************

110. spacer 6.10|106108|36|CP025929|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

atttttttatattccatcctcttttaatcgataaaa	CRISPR spacer
atttttttatattccatcctcttttaatcgataaaa	Protospacer
************************************

111. spacer 6.11|106181|34|CP025929|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

agatttctggtgaggatttcgtgcgatcgactgc	CRISPR spacer
agatttctggtgaggatttcgtgcgatcgactgc	Protospacer
**********************************

112. spacer 6.12|106252|35|CP025929|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtccccccgatcgcgatcagagcatttatccca	CRISPR spacer
ctgtccccccgatcgcgatcagagcatttatccca	Protospacer
***********************************

113. spacer 6.13|106324|40|CP025929|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

aagggttttccagtggtgaggaaatagtgcaaagatagct	CRISPR spacer
aagggttttccagtggtgaggaaatagtgcaaagatagct	Protospacer
****************************************

114. spacer 6.14|106401|35|CP025929|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

tttattgaatcctcgccaaaagcgaggctttttct	CRISPR spacer
tttattgaatcctcgccaaaagcgaggctttttct	Protospacer
***********************************

115. spacer 6.15|106473|34|CP025929|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

taaagagggaaaatccgttcatctaccaatagct	CRISPR spacer
taaagagggaaaatccgttcatctaccaatagct	Protospacer
**********************************

116. spacer 6.16|106544|36|CP025929|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

ttttatcaaaactgaatcagcccaatttcaaatacc	CRISPR spacer
ttttatcaaaactgaatcagcccaatttcaaatacc	Protospacer
************************************

117. spacer 6.17|106617|35|CP025929|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

aaggatagttctattatgaaggatttggtggttca	CRISPR spacer
aaggatagttctattatgaaggatttggtggttca	Protospacer
***********************************

118. spacer 6.18|106689|37|CP025929|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

ccgtgttccacaaaacaggggaacaaatcgccaagaa	CRISPR spacer
ccgtgttccacaaaacaggggaacaaatcgccaagaa	Protospacer
*************************************

119. spacer 6.19|106763|35|CP025929|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

aggactaaaaagcctttacacgactacttacacca	CRISPR spacer
aggactaaaaagcctttacacgactacttacacca	Protospacer
***********************************

120. spacer 6.20|106835|36|CP025929|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

caggccaacaaaaagccgaactctttatattcaaat	CRISPR spacer
caggccaacaaaaagccgaactctttatattcaaat	Protospacer
************************************

121. spacer 6.21|106908|36|CP025929|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

ttattagaaatcagcaccggataccccaacttgagt	CRISPR spacer
ttattagaaatcagcaccggataccccaacttgagt	Protospacer
************************************

122. spacer 6.22|106981|34|CP025929|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

aagagttttatagcgttgcggctacgaaacactt	CRISPR spacer
aagagttttatagcgttgcggctacgaaacactt	Protospacer
**********************************

123. spacer 6.23|107052|34|CP025929|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

gaggctttgtaaaaaattcgatagttggatttgg	CRISPR spacer
gaggctttgtaaaaaattcgatagttggatttgg	Protospacer
**********************************

124. spacer 6.23|107052|34|CP025929|CRT,PILER-CR,CRISPRCasFinder matches to LC425525 (Uncultured phage DNA, contig: NODE869) position: , mismatch: 2, identity: 0.941

gaggctttgtaaaaaattcgatagttggatttgg	CRISPR spacer
gaagctttgtaaaaaattcgataattggatttgg	Protospacer
**.********************.**********

125. spacer 6.22|106981|34|CP025929|CRT,PILER-CR,CRISPRCasFinder matches to LC425515 (Uncultured phage DNA, contig: NODE375) position: , mismatch: 3, identity: 0.912

aagagttttatagcgttgcggctacgaaacactt-	CRISPR spacer
aagagttttatagcgttgcggctacaaaa-actaa	Protospacer
*************************.*** ***

126. spacer 4.38|25957|33|CP025929|CRISPRCasFinder,CRT,PILER-CR matches to AP017628 (Pleomorphomonas sp. SM30 plasmid pSM30-2 DNA, complete genome) position: , mismatch: 9, identity: 0.727

caacaaaattccctttgtcgcccaagctgcagt	CRISPR spacer
tctcaacattcccttcgtcgcccaagcagatga	Protospacer
.  *** ********.*********** *  *

127. spacer 1.4|844|35|CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 10, identity: 0.714

gactagttgttctggggcccaaaaagccttgggga	CRISPR spacer
atggaaaccttttggggcccaaaaggccttgggga	Protospacer
.   *. . **.************.**********

128. spacer 4.31|25453|34|CP025929|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP042265 (Litoreibacter sp. LN3S51 plasmid unnamed4, complete sequence) position: , mismatch: 10, identity: 0.706

gagaacaaaaacagacaacggcatttttttcatg	CRISPR spacer
aaacggacaaacagacatcggcatttttgtcagc	Protospacer
.*. . * ********* ********** ***

129. spacer 4.31|25453|34|CP025929|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021133 (Pseudomonas fragi strain NMC25 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.706

gagaacaaaaacagacaacggcatttttttcatg	CRISPR spacer
cagaacaaaaacgaacaacggcattgtcaggcgg	Protospacer
 ***********..*********** *.     *

130. spacer 4.36|25811|32|CP025929|CRISPRCasFinder,CRT,PILER-CR matches to MK448865 (Streptococcus phage Javan182, complete genome) position: , mismatch: 10, identity: 0.688

gaaaaaccattactgccgctactggcaagagg	CRISPR spacer
tttttaccattactgccgctgctggcaatcta	Protospacer
     ***************.*******   .

131. spacer 3.7|5754|37|CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 11, identity: 0.703

cttttggggcccaaaaggccttggggaagatagcccc	CRISPR spacer
gttctggggcccaaaaagccttggggacttttaactt	Protospacer
 **.************.**********   * . *..

132. spacer 4.36|25811|32|CP025929|CRISPRCasFinder,CRT,PILER-CR matches to MK448701 (Streptococcus phage Javan197, complete genome) position: , mismatch: 11, identity: 0.656

gaaaaaccattactgccgctactggcaagagg	CRISPR spacer
tttttaccattactgcctctgctggcaatgta	Protospacer
     ************ **.******* . .

133. spacer 4.36|25811|32|CP025929|CRISPRCasFinder,CRT,PILER-CR matches to MK448869 (Streptococcus phage Javan190, complete genome) position: , mismatch: 11, identity: 0.656

gaaaaaccattactgccgctactggcaagagg	CRISPR spacer
tttttaccattactgcctctgctggcaatgta	Protospacer
     ************ **.******* . .

134. spacer 4.36|25811|32|CP025929|CRISPRCasFinder,CRT,PILER-CR matches to MK448870 (Streptococcus phage Javan192, complete genome) position: , mismatch: 11, identity: 0.656

gaaaaaccattactgccgctactggcaagagg	CRISPR spacer
tttttaccattactgcctctgctggcaatgta	Protospacer
     ************ **.******* . .

135. spacer 4.7|23682|38|CP025929|PILER-CR,CRISPRCasFinder,CRT matches to MK448946 (Streptococcus phage Javan456, complete genome) position: , mismatch: 12, identity: 0.684

gacagcgaggtttttccaacttgaaaaataaaaaaccc	CRISPR spacer
aagttaccggtttttcaaactttaaaaataaaaaattt	Protospacer
.*      ******** ***** ************...

136. spacer 4.7|23682|38|CP025929|PILER-CR,CRISPRCasFinder,CRT matches to MK448871 (Streptococcus phage Javan196, complete genome) position: , mismatch: 12, identity: 0.684

gacagcgaggtttttccaacttgaaaaataaaaaaccc	CRISPR spacer
aagttaccggtttttcaaactttaaaaataaaaaattt	Protospacer
.*      ******** ***** ************...

137. spacer 4.7|23682|38|CP025929|PILER-CR,CRISPRCasFinder,CRT matches to MK448976 (Streptococcus phage Javan528, complete genome) position: , mismatch: 12, identity: 0.684

gacagcgaggtttttccaacttgaaaaataaaaaaccc	CRISPR spacer
aagttaccggtttttcaaactttaaaaataaaaaattt	Protospacer
.*      ******** ***** ************...

138. spacer 4.7|23682|38|CP025929|PILER-CR,CRISPRCasFinder,CRT matches to MK448961 (Streptococcus phage Javan494, complete genome) position: , mismatch: 12, identity: 0.684

gacagcgaggtttttccaacttgaaaaataaaaaaccc	CRISPR spacer
aagttaccggtttttcaaactttaaaaataaaaaattt	Protospacer
.*      ******** ***** ************...

139. spacer 4.7|23682|38|CP025929|PILER-CR,CRISPRCasFinder,CRT matches to MK448697 (Streptococcus phage Javan185, complete genome) position: , mismatch: 12, identity: 0.684

gacagcgaggtttttccaacttgaaaaataaaaaaccc	CRISPR spacer
aagttaccggtttttcaaactttaaaaataaaaaattt	Protospacer
.*      ******** ***** ************...

140. spacer 4.7|23682|38|CP025929|PILER-CR,CRISPRCasFinder,CRT matches to MK448693 (Streptococcus phage Javan177, complete genome) position: , mismatch: 12, identity: 0.684

gacagcgaggtttttccaacttgaaaaataaaaaaccc	CRISPR spacer
aagttaccggtttttcaaactttaaaaataaaaaattt	Protospacer
.*      ******** ***** ************...

141. spacer 4.7|23682|38|CP025929|PILER-CR,CRISPRCasFinder,CRT matches to MK448766 (Streptococcus phage Javan465, complete genome) position: , mismatch: 12, identity: 0.684

gacagcgaggtttttccaacttgaaaaataaaaaaccc	CRISPR spacer
aagttaccggtttttcaaactttaaaaataaaaaattt	Protospacer
.*      ******** ***** ************...

142. spacer 4.7|23682|38|CP025929|PILER-CR,CRISPRCasFinder,CRT matches to MK448696 (Streptococcus phage Javan183, complete genome) position: , mismatch: 12, identity: 0.684

gacagcgaggtttttccaacttgaaaaataaaaaaccc	CRISPR spacer
aagttaccggtttttcaaactttaaaaataaaaaattt	Protospacer
.*      ******** ***** ************...

143. spacer 4.7|23682|38|CP025929|PILER-CR,CRISPRCasFinder,CRT matches to MK448868 (Streptococcus phage Javan188, complete genome) position: , mismatch: 12, identity: 0.684

gacagcgaggtttttccaacttgaaaaataaaaaaccc	CRISPR spacer
aagttaccggtttttcaaactttaaaaataaaaaattt	Protospacer
.*      ******** ***** ************...

144. spacer 4.7|23682|38|CP025929|PILER-CR,CRISPRCasFinder,CRT matches to MK448866 (Streptococcus phage Javan184, complete genome) position: , mismatch: 12, identity: 0.684

gacagcgaggtttttccaacttgaaaaataaaaaaccc	CRISPR spacer
aagttaccggtttttcaaactttaaaaataaaaaattt	Protospacer
.*      ******** ***** ************...

145. spacer 4.7|23682|38|CP025929|PILER-CR,CRISPRCasFinder,CRT matches to MK448699 (Streptococcus phage Javan189, complete genome) position: , mismatch: 12, identity: 0.684

gacagcgaggtttttccaacttgaaaaataaaaaaccc	CRISPR spacer
aagttaccggtttttcaaactttaaaaataaaaaattt	Protospacer
.*      ******** ***** ************...

146. spacer 4.7|23682|38|CP025929|PILER-CR,CRISPRCasFinder,CRT matches to MK448867 (Streptococcus phage Javan186, complete genome) position: , mismatch: 12, identity: 0.684

gacagcgaggtttttccaacttgaaaaataaaaaaccc	CRISPR spacer
aagttaccggtttttcaaactttaaaaataaaaaattt	Protospacer
.*      ******** ***** ************...

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

95205 : 143606

Thalassomonas_phage(13.33%)

transposase,integrase

attL 129921:129949|attR 142222:142250

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUS35910.1\|95205_96354_+\|transposase	transposase	NA	NA	NA	NA
AUS35911.1\|96334_97954_+	hypothetical protein	E7DNC5	Pneumococcus_phage	1.2e-24	29.7
AUS35912.1\|97950_98214_-	hypothetical protein	NA	NA	NA	NA
AUS35913.1\|98203_98551_-	hypothetical protein	NA	NA	NA	NA
AUS35914.1\|98771_99677_+	hypothetical protein	NA	NA	NA	NA
AUS35915.1\|99828_103542_+	hypothetical protein	NA	NA	NA	NA
AUS35916.1\|103767_104319_+	hypothetical protein	NA	NA	NA	NA
AUS35917.1\|104333_105062_+	hypothetical protein	NA	NA	NA	NA
AUS35918.1\|107220_109008_-\|transposase	transposase	A0A2H4PB66	Aphanizomenon_phage	5.4e-55	34.9
AUS35919.1\|109150_109300_+	CopG family transcriptional regulator	NA	NA	NA	NA
AUS35920.1\|109432_110119_+	hypothetical protein	NA	NA	NA	NA
AUS35921.1\|110124_110316_+	hypothetical protein	NA	NA	NA	NA
AUS35922.1\|110567_110750_-	hypothetical protein	NA	NA	NA	NA
AUS35923.1\|110828_111497_-	hypothetical protein	NA	NA	NA	NA
AUS35924.1\|111658_111877_+	hypothetical protein	NA	NA	NA	NA
AUS35925.1\|112166_112508_+	hypothetical protein	U5XK15	Phormidium_phage	1.2e-16	40.4
AUS35926.1\|112579_113662_+	hypothetical protein	NA	NA	NA	NA
AUS35927.1\|113724_114096_+	hypothetical protein	NA	NA	NA	NA
AUS35928.1\|114649_115000_+	hypothetical protein	A0A2I7S0C0	Vibrio_phage	1.4e-28	51.8
AUS35929.1\|115458_115932_+	hypothetical protein	NA	NA	NA	NA
AUS35930.1\|116112_116778_+	hypothetical protein	NA	NA	NA	NA
AUS35931.1\|117281_117548_+	hypothetical protein	NA	NA	NA	NA
AUS35932.1\|117614_118514_+	hypothetical protein	A0A1V0EEV1	Caulobacter_phage	1.4e-35	32.1
AUS35933.1\|118639_119311_+	hypothetical protein	A0A2H4GYA3	Pseudomonas_phage	8.0e-44	42.3
AUS35934.1\|119434_120262_+	SAM-dependent methyltransferase	A8HNV9	Thalassomonas_phage	1.4e-18	40.4
AUS35935.1\|120252_121425_-\|transposase	transposase	A0A7P9	Microcystis_virus	4.4e-215	97.4
AUS35936.1\|121402_122011_-	MerR family DNA-binding transcriptional regulator	A0A7Q0	Microcystis_virus	4.6e-107	98.5
AUS35937.1\|122073_122328_+	hypothetical protein	A8HNV9	Thalassomonas_phage	1.3e-10	39.3
AUS35938.1\|122474_122804_+	hypothetical protein	NA	NA	NA	NA
AUS35939.1\|123123_123501_+	hypothetical protein	NA	NA	NA	NA
AUS35940.1\|123621_123840_+	hypothetical protein	NA	NA	NA	NA
AUS35941.1\|124173_124533_+	hypothetical protein	NA	NA	NA	NA
AUS35942.1\|124638_124818_+	hypothetical protein	NA	NA	NA	NA
AUS35943.1\|125021_125543_+	prepilin-type cleavage/methylation domain-containing protein	NA	NA	NA	NA
AUS35944.1\|125603_125867_+	hypothetical protein	NA	NA	NA	NA
AUS35945.1\|126414_127548_-\|transposase	transposase	A0A1L2BWN4	Bacteriophage	1.5e-114	56.9
AUS35946.1\|127761_128235_+	DUF29 domain-containing protein	A0JC30	Ralstonia_phage	1.8e-18	38.4
AUS35947.1\|128237_128840_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AUS35948.1\|129043_129481_-	VapC toxin family PIN domain ribonuclease	NA	NA	NA	NA
AUS35949.1\|129477_129762_-	AbrB family transcriptional regulator	NA	NA	NA	NA
129921:129949	attL	NA	NA	NA	NA
AUS35950.1\|130432_133246_+	DEAD/DEAH box helicase	A0A1B1IUF6	uncultured_Mediterranean_phage	2.9e-10	29.1
AUS35951.1\|133404_133746_-	transcriptional regulator	NA	NA	NA	NA
AUS35952.1\|134084_134381_-	hypothetical protein	NA	NA	NA	NA
AUS35953.1\|134367_134676_-	nucleotidyltransferase	NA	NA	NA	NA
AUS35954.1\|134853_135978_-\|integrase	integrase	A0A1P8DJ76	Virus_Rctr85	7.9e-12	30.8
AUS35955.1\|136057_136501_-	hypothetical protein	NA	NA	NA	NA
AUS35956.1\|136642_137605_+	NYN domain-containing protein	NA	NA	NA	NA
AUS35957.1\|137679_139356_-	hypothetical protein	NA	NA	NA	NA
AUS35958.1\|140334_142620_+	kinase	U5J9W1	Bacillus_phage	1.0e-13	34.2
142222:142250	attR	NA	NA	NA	NA
AUS35959.1\|142616_143606_+\|transposase	IS5/IS1182 family transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. CP012375

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: CP012375_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP012375_1

455423-455536

TypeV

Consensus_repeat	Method
AATCTCTAATAGGGGTTAAGATTAATGGGAACGCTGTAGGGTT	CRISPRCasFinder

1 spacers

cas14j

The CRISPR arrays of CP012375_1

>merge|CP012375|1|455423-455536|CRISPRCasFinder
AATCTCTAATAGGGGTTAAGATTAATGGGAACGCTGTAGGGTTGATTCATGAATCAACCCTACAAAGTATTAATCTCTAATAGGGGTTAAGATTAATGGGAACGCTGTAGGGTT

>CP012375|1|1|455423-455536|CRISPRCasFinder
AATCTCTAATAGGGGTTAAGATTAATGGGAACGCTGTAGGGTT	GATTCATGAATCAACCCTACAAAGTATT
AATCTCTAATAGGGGTTAAGATTAATGGGAACGCTGTAGGGTT

Protein	Signature genes	Signature genes Name	Protein_function
CP012375.1\|AOC51195.1\|447917_448190_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|367913
CP012375.1\|AOC51204.1\|455011_455344_-\|Phosphomannomutase	unknown	unknown	gnl\|CDD\|372702
CP012375.1\|AOC51207.1\|458929_460144_-\|Mobile-element-protein	cas14j	-	gnl\|CDD\|223747
CP012375.1\|AOC51213.1\|466715_468020_+\|Branched-chain-amino-acid-ABC-transporter,-amino-acid-binding-protein	unknown	unknown	gnl\|CDD\|380569
CP012375.1\|AOC51212.1\|465059_466283_+\|carboxyl-terminal-processing-protease	unknown	unknown	gnl\|CDD\|272970
CP012375.1\|AOC51206.1\|457609_458839_-\|TPR-repeat-containing-protein	unknown	unknown	gnl\|CDD\|276809
CP012375.1\|AOC51198.1\|450792_451203_+\|Glyoxalase/bleomycin-resistance-protein/dioxygenase	unknown	unknown	gnl\|CDD\|319925
CP012375.1\|AOC51210.1\|462513_463641_+\|Aldo/keto-reductase-family	unknown	unknown	gnl\|CDD\|224370
CP012375.1\|AOC51200.1\|452244_452391_+\|hypothetical-protein	unknown	unknown	unknown
CP012375.1\|AOC51211.1\|463773_464853_+\|Fructose-bisphosphate-aldolase-class-II	unknown	unknown	gnl\|CDD\|181691
CP012375.1\|AOC51201.1\|452540_453335_+\|ABC-type-transport-system-involved-in-resistance-to-organic-solvent,-permease-component	unknown	unknown	gnl\|CDD\|215575
CP012375.1\|AOC51197.1\|448398_450711_+\|Type-I-restriction-modification-system,-restriction-subunit-R	unknown	unknown	gnl\|CDD\|226581
CP012375.1\|AOC51202.1\|453462_453576_+\|hypothetical-protein	unknown	unknown	unknown
CP012375.1\|AOC51196.1\|448170_448395_+\|Helix-turn-helix-protein,-CopG-family	unknown	unknown	unknown
CP012375.1\|AOC51214.1\|468593_469811_-\|Cell-division-protein-FtsW	unknown	unknown	gnl\|CDD\|279444
CP012375.1\|AOC51208.1\|460285_460429_+\|Mobile-element-protein	unknown	unknown	gnl\|CDD\|376616
CP012375.1\|AOC51205.1\|455654_457532_-\|Cell-division-protein-FtsH	unknown	unknown	gnl\|CDD\|273520
CP012375.1\|AOC51199.1\|451169_452354_-\|LSU-m5C1962-methyltransferase-RlmI	unknown	unknown	gnl\|CDD\|224017
CP012375.1\|AOC51203.1\|453532_454906_-\|Protein-of-unknown-function-DUF512	unknown	unknown	gnl\|CDD\|132322
CP012375.1\|AOC51209.1\|460583_462059_-\|Cytosol-aminopeptidase-PepA	unknown	unknown	gnl\|CDD\|234863

Protein	Function_ID	Function_description	E-value
CP012375.1\|AOC51201.1\|452540_453335_+\|ABC-type-transport-system-involved-in-resistance-to-organic-solvent,-permease-component	gnl\|CDD\|215575	PLN03100, PLN03100, Permease subunit of ER-derived-lipid transporter; Provisional.	5.39794e-107
CP012375.1\|AOC51195.1\|447917_448190_+\|hypothetical-protein	gnl\|CDD\|367913	pfam04365, BrnT_toxin, Ribonuclease toxin, BrnT, of type II toxin-antitoxin system. BrnT is a ribonuclease toxin of a type II toxin-antitoxin system that exhibits a RelE-like fold. The antitoxin that neutralizes this toxin is pfam14384. BrnT is found in bacteria, archaea, bacteriophage, and plasmids. BrnT-BrnA forms a 2:2 tetrameric complex and autoregulates its own expression, which is induced by a number of different environmental stresses. Expression of BrnT alone results in cessation of bacterial growth which can be rescued after subsequent expression of BrnA.	7.52161e-27
CP012375.1\|AOC51204.1\|455011_455344_-\|Phosphomannomutase	gnl\|CDD\|372702	pfam13747, DUF4164, Domain of unknown function (DUF4164). This is a family of short, approx 100 residue-long, bacterial proteins of unknown function. There is several conserved LE/LD sequence pairs.	1.09249e-07
CP012375.1\|AOC51207.1\|458929_460144_-\|Mobile-element-protein	gnl\|CDD\|223747	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	1.51424e-29
CP012375.1\|AOC51213.1\|466715_468020_+\|Branched-chain-amino-acid-ABC-transporter,-amino-acid-binding-protein	gnl\|CDD\|380569	cd06346, PBP1_ABC_ligand_binding-like, type 1 periplasmic ligand-binding domain of uncharacterized ABC (Atpase Binding Cassette)-type active transport systems predicted to be involved in uptake of amino acids, peptides, or inorganic ions. This subgroup includes the type 1 periplasmic ligand-binding domain of uncharacterized ABC (Atpase Binding Cassette)-type active transport systems that are predicted to be involved in uptake of amino acids, peptides, or inorganic ions. This subgroup has high sequence similarity to members of the family of hydrophobic amino acid transporters (HAAT), such as leucine-isoleucine-valine binding protein (LIVBP); however, its ligand specificity has not been determined experimentally.	7.99502e-112
CP012375.1\|AOC51199.1\|451169_452354_-\|LSU-m5C1962-methyltransferase-RlmI	gnl\|CDD\|224017	COG1092, COG1092, Predicted SAM-dependent methyltransferases [General function prediction only].	4.87197e-118
CP012375.1\|AOC51206.1\|457609_458839_-\|TPR-repeat-containing-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	1.41036e-22
CP012375.1\|AOC51198.1\|450792_451203_+\|Glyoxalase/bleomycin-resistance-protein/dioxygenase	gnl\|CDD\|319925	cd07264, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC domain is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.	4.43517e-37
CP012375.1\|AOC51210.1\|462513_463641_+\|Aldo/keto-reductase-family	gnl\|CDD\|224370	COG1453, COG1453, Predicted oxidoreductases of the aldo/keto reductase family [General function prediction only].	4.88108e-142
CP012375.1\|AOC51205.1\|455654_457532_-\|Cell-division-protein-FtsH	gnl\|CDD\|273520	TIGR01241, ATP-dependent_zinc_metalloprotease_FtsH, ATP-dependent metalloprotease FtsH. HflB(FtsH) is a pleiotropic protein required for correct cell division in bacteria. It has ATP-dependent zinc metalloprotease activity. It was formerly designated cell division protein FtsH. [Cellular processes, Cell division, Protein fate, Degradation of proteins, peptides, and glycopeptides].	0
CP012375.1\|AOC51197.1\|448398_450711_+\|Type-I-restriction-modification-system,-restriction-subunit-R	gnl\|CDD\|226581	COG4096, HsdR, Type I site-specific restriction-modification system, R (restriction) subunit and related helicases [Defense mechanisms].	2.70562e-106
CP012375.1\|AOC51211.1\|463773_464853_+\|Fructose-bisphosphate-aldolase-class-II	gnl\|CDD\|181691	PRK09196, PRK09196, fructose-bisphosphate aldolase class II.	0
CP012375.1\|AOC51212.1\|465059_466283_+\|carboxyl-terminal-processing-protease	gnl\|CDD\|272970	TIGR00225, Tail-specific_protease, C-terminal peptidase (prc). A C-terminal peptidase with different substrates in different species including processing of D1 protein of the photosystem II reaction center in higher plants and cleavage of a peptide of 11 residues from the precursor form of penicillin-binding protein in E.coli E.coli and H influenza have the most distal branch of the tree and their proteins have an N-terminal 200 amino acids that show no homology to other proteins in the database. [Protein fate, Degradation of proteins, peptides, and glycopeptides, Protein fate, Protein modification and repair].	4.44049e-140
CP012375.1\|AOC51214.1\|468593_469811_-\|Cell-division-protein-FtsW	gnl\|CDD\|279444	pfam01098, FTSW_RODA_SPOVE, Cell cycle protein. This entry includes the following members; FtsW, RodA, SpoVE.	2.0154e-103
CP012375.1\|AOC51208.1\|460285_460429_+\|Mobile-element-protein	gnl\|CDD\|376616	pfam01797, Y1_Tnp, Transposase IS200 like. Transposases are needed for efficient transposition of the insertion sequence or transposon DNA. This family includes transposases for IS200 from E. coli.	2.03639e-09
CP012375.1\|AOC51203.1\|453532_454906_-\|Protein-of-unknown-function-DUF512	gnl\|CDD\|132322	TIGR03279, cyano_FeS_chp, putative radical SAM enzyme, TIGR03279 family. Members of this protein family are predicted radical SAM enzymes of unknown function, apparently restricted to and universal across the Cyanobacteria. The high trusted cutoff score for this model, 700 bits, excludes homologs from other lineages. This exclusion seems justified because a significant number of sequence positions are simultaneously unique to and invariant across the Cyanobacteria, suggesting a specialized, conserved function, perhaps related to photosynthesis. A distantly related protein family, TIGR03278, in universal in and restricted to archaeal methanogens, and may be linked to methanogenesis.	0
CP012375.1\|AOC51209.1\|460583_462059_-\|Cytosol-aminopeptidase-PepA	gnl\|CDD\|234863	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional.	0

>CP012375.1|AOC51204.1|455011_455344_-|Phosphomannomutase
MANETVTYSLEAVLTRIEGKIDSLEKRIDERFDKVDERFDKIEERLTKVEIGQVELKGEIKALDQRLTTEIKGLTARVAYQEFTNRGILIALVVAILGGAAKLFGFFPNP
>CP012375.1|AOC51203.1|453532_454906_-|Protein-of-unknown-function-DUF512
MSELTIRPAKISGVIPDSIAAEVGFEIGDSLVSINGNRPRDLIDYQFLCADEFLTLEVLDSQGKTHQVKIEKDYHEDLGLEFETALFDGLIQCNNKCPFCFIDQQPEGKRETLYYKDDDYRLSFLYGSYLTLTNLTSKEWQRIEKMRISPLFVSVHATEPDLRIRLLKNPRAGQILDHLKWLQARQLQIHAQVVVCPNINDGIHLERTLLDLVSFHRGDIPCVESIAVVPVGLTRFRPQEDELIPVSQEKAREVIEQVQTLQKKFRQEFGSNVVWLADEWFLIARVDLPPQSHYEDYPQIGNGVGSIRQFIRDFQKTAKKLLPAQISPSRRLIWVVGNAVEQAFQPLVKQLNKVQGLTVELVALNSDYWGQEITVTGLLTGQDILKGLQGKNLGDGVLLPSLMLKHGEAVFLDDLTLETVINQLGVPIYPVLGVEELIKTCLALNPFSDFLSHIGEQ
>CP012375.1|AOC51202.1|453462_453576_+|hypothetical-protein
MRPYHWRNNIIVGANCIRPLLITFTAHQYVRESQRKD
>CP012375.1|AOC51201.1|452540_453335_+|ABC-type-transport-system-involved-in-resistance-to-organic-solvent,-permease-component
MPRKSDAASGLSLWFQRLGAAGLLAGQTFLHILNGKIHRRNTLEQMSIVGPESLTIALITAAFVGMVFTIQVAREFIFFGAGSFVGGVLSLALTRELAPVLTAVVVAGRVGSAFAAEIGTMRVTEQIDALYILKTDPIDYLVIPRVIACSLMLPLLTIISLVTGLLGGLFISDSLYGISYSLFLQSAQNFMETWDLISSMLKSLIFGVLIAIIGCSWGLTTTGGAKGVGQSTTTAVVTSLLAIFVANFFLSWLMFQGTGNAEIG
>CP012375.1|AOC51200.1|452244_452391_+|hypothetical-protein
MTSPSISLIAPENIQGWNRLTASILWFFRIIFAKSGMDKESGLIADGY
>CP012375.1|AOC51199.1|451169_452354_-|LSU-m5C1962-methyltransferase-RlmI
MPDLAKIILKNHKIDAVKRFHPWIFSGAIKEMEGEVKEGAIVEVYSDRGEYLATGLYNPSNIAVKILSFQKVSDIAQLFLEKFQNAYRLRQQIGLVDNPKTNCYRLINAEGDGLPSLIVDWYNGTAVIQAYSLALYQRLDLIVDCLKTIYADNLRAVYDKSAAVLAKSAHISENKYLFGQKTSDEVLESGHRFIIDWEKGQKTGFFLDQRENRALLSQYSHNKRVLNTFSYSGGFSVYAMQAGAALVDSVDSSHGAIDLTEKNIALNNLSQVPHQSYSADVFNFLRDCQEDYDLIVLDPPAFAKSIQSRHQAVMAYKRLNYQAFQKIRPQGIIFTFSCSQVVNEEHFQGAVMAAAIESARPVRILARLSQPADHPTSIYHSEGSYLKGLVLAVD
>CP012375.1|AOC51198.1|450792_451203_+|Glyoxalase/bleomycin-resistance-protein/dioxygenase
MNNPPDSPFNYTEAFIALGTSNFDRSVQFYRQLLQQEPSPYLAAVYAEFRLINLKLGLFCPKESHREEFGDSRGSGMSICFEVESLEKAIEHWSEIGYGARGEISQASHGSEIYIYDPDGNRLIFHQSTAKTNPFR
>CP012375.1|AOC51197.1|448398_450711_+|Type-I-restriction-modification-system,-restriction-subunit-R
MNEAETRAELIDPALKAAGWGVIPDSKIRREVIAPGRLVGSGQRSSSKTCDYVLVYRGHKLATLEAKKRDAHPTEGLGQAKDYAERLQTPFALCTNGLRIYRVDTRAGKEGYIDRYPTQEELWAATYPDSNHWRDRFATVPPDNKSGMRESRYYQHNAIQAVLEAIAAGQKRMLLTMATGTGKTTIALQIAWKLFHSSWNLSGEPTHRPCILFLTDRNILANQALTEFTAFPEDALVRIEPKNIQKTKKVPKNGSVFFSIFQTFMTQNGEELAPNFLEYAPDFFDLVIVDECHRGGANDESTWRKILEYFAPAVQLGLTATPKRDLNGDTYKYFGEPLYTYSLKEGINEGYLTPFKVVEFTTSLDEYQYDPDDELIEGDIDENKVYTESDFNRIIEIEERERQRVKIFMEAIDQNEKTLVFCANQDHALAIRDLINQMAISSDPNYCARVTANDGSLGETHLKKFQDNEKRLPTILTTSRKLSTGVDARNLRNIVLLRPVKSMIEFKQIIGRGTRLFDNKDYFTIYDFVKAHENFNDPEWDGEPQEPVVIDPRPRPEPPDAIEDPLDEPDPLPIRQKIKIKLADGKERELEHTQRTTFWNADGKPISAEEFIQQLFGDIPDLFQDEAELRHLWGRPDTRKSLLTGLAEKGYGEEQLQAIARITNTENSDIYDVLTYIAYAARPLTREERVIKHKDLIFSKYTRKQREFLDFILDQYIRSGVGELDREKLPKLIEIKYHTINEAISQLGEIQEISGVFMSFHAYLYWSDAA
>CP012375.1|AOC51196.1|448170_448395_+|Helix-turn-helix-protein,-CopG-family
MKAEEFDAKFDAGEDMSEFLDFSTARRPNREKQKIELDLPFWIIRKLEAEAQKEGVSTQTFLENYLARHIASAP
>CP012375.1|AOC51195.1|447917_448190_+|hypothetical-protein
MPSFEYDENKSKTNQQKHGIDFIEAQKLWEDDNLLEITGKSETEPRYLIIGQVQDKHWTAVITYRSEMIRIISVRRSRTNEVTWYESRRI
>CP012375.1|AOC51205.1|455654_457532_-|Cell-division-protein-FtsH
MSIKSKPPSQSRLIGNVLLAVGGLFLIVNLLFPQLFGPSVPKVPYSLFIDQVEDGNVARVSVGQNEIRYQLKNDQEGNYGRIFSTTPIFDLELPKRLEAKGVEFAAAPPPKNGWIGSVLSWVIPPLIFVGIWQFFLARSGGGGPAGALSITKSRAKVYVEGDTTKTTFEDVAGVEEAKTELAEIVEFLKYPQRYIQIGARIPKGVLLVGPPGTGKTLLAKAVAGEAGVPFFSISGSEFVELFVGAGAARVRDLFEQAKKKAPCIIFIDELDAIGKSRANGNFMGGNDEREQTLNQLLTEMDGFNAGDATVIVLAATNRPETLDPALLRPGRFDRQVLVDRPDLAGRLKILEIYAGKVKLGSDVDLKQIATRTPGFAGADLANLVNEAALLAARNQRSTVAQEDFNEAIERVVAGLEKKSRVLSEKEKKIVAYHEVGHALVGAVMPGGGKVAKISIVPRGMAALGYTLQMPTEDRFLMDDTELRDQIATLLGGRAAEEIIFGSITTGAANDLQRATDLAERMVTTYGMSKTLGPLAYEKGQQNSFLGDGMMNPRRLVSDDTAKAIDNEVKEIVENGHQQALDILAQNRDLLEEIAQEILSKEVIEGEQLQALLERVKPLDREPVTV
>CP012375.1|AOC51206.1|457609_458839_-|TPR-repeat-containing-protein
MGDACKINKTSVEIRMQGLLRKLWRAIENFFTRLLGGQEGKGKVQAIESVPLTDTDYEFLYMQLLDGVSHGWHEGRILRFFEKLGDRGRQKDWVEWLERFGTRLQSSASLNQLLASRMIRLGELARAFPGIERIGEASYEIGYQLYTKETATLIWEYAGEDEAPGSYSLPQPPENLLYSGETSDFNGNDPENPQLETLTLDELFNRLQNDPTLAGQMAEQLGIENKDAESIIDSLIAQFSPQEAKTPETAEDWFNQGLEQANLGNWSNAIADWEQALTIDPQLASAWHNRGGALAMIGNYEEALNSYDRALEITPNDHQVINARGSALYGLQRWQEALECWQQVLEADDNFYQAWYNRGSTLENLGETQAAIACYQKALGIAPDFELAQTRLEALLGQKPPEDDGNPPA
>CP012375.1|AOC51207.1|458929_460144_-|Mobile-element-protein
MITLTYQYKLKVNKKQEREIVHILDVCKSVYNYALSERKDWLNSRKCLADRCSLVSEYIIPADQPYPNYFVQAKNLTEAKKVDPILKTVNAQVLQQVLKTVDKAFDHIKSKGFGFPRFKKKMRSFVFPALSKNFLGDEYLNFPQLGKIRIRKSREYPSGFEPKQARIIQKASGFYVLVSFQSTELVPDMTVGKTCLGIDAGIESFVATSRGDLIKAPRFLLKVQSKLKLLQRRLKHQVKGSKNWLKLQDKIARLHEKVSNTRRDWHFKLAHYLCDLADNIFVEDINFVSWSRGIVRKQSLDSGIGSFINEILPFVAWKRGKYYLKVDKNGTSQECPNCGAITGKKALSERVHRCDSCGHIEPRDTASAKVIENRGKNAVGLTVLENARGGDLTGIDWVKLGRSS
>CP012375.1|AOC51208.1|460285_460429_+|Mobile-element-protein
MAAKYFDNKPYFWAGAYFVASCGDVTVEQLKKYVENQNSPKVERLLR
>CP012375.1|AOC51209.1|460583_462059_-|Cytosol-aminopeptidase-PepA
MDIRSTDTSLLTWTGDTLALGLPEGAVEIAGELAELNNKLGGTLEELISETEFEGKLGSSAATRLGGGGPIRKLILVGLGKTADFDLQTLRLAAAAIARLAKQQKSQALAISLPVVGDQSATAGAITEGLLLANHQDTRFKSTKEEKGAKLATVELLGLGEQSSAIAKAEQICSGVILARELVNAPANTVTPLTMAETAEQIAAEYGLSLNILEQEECESLGMGAFLGVAKASDIPPKFIHLIYKPQGNPKRKLAIVGKSLTFDSGGLNIKGAGSGIETMKMDMGGGAATLGAAKAIAQLRPEVEVHFICPATENMISGRAMHPGDILTASNGKTIEVNNTDAEGRLTLADGLVFAEKLEVDAIVDLATLTGACVVALGEDIAGLWSSDESLGDQLQEAAKLAGEKFWPMPLEEKYFEGMKSQIADMKNTGPRPGGSITAALFLKQFIDNTPWLHLDIAGPVWSDKENGVNNSGATGFPVRTLVNWVMANN
>CP012375.1|AOC51210.1|462513_463641_+|Aldo/keto-reductase-family
MRYRRFGRTNWQFSLFSLGTMRCLSSESVFAATLDRALELGINHLETARGYGNSEVFLGRYLQRQGVRERVYLTTKLVPTPDRQTMEKAIAESLERLQLNHLDCLAIHGINTREHLNWIKDPQGCMKAVFLAQEAGKIGHIGFSTHAPLEIILETINTDFFAFVNIHYYFFWQRQQPAIALAQAKDMGVFIISPADKGGGLHRPPKKLEELCAPFSPLELNYRFLLSDPRITTLSVGAAIPEELESIINVCERDQPLDAAEIAVFKRLEAHLTDKLATDLCSQCYQCLPCPENINIPEVLRLRNLAVAYEMTDFGQYRYQMLENAGHWFPGRKANNCTECGDCLPRCPEKLPIPRLLFDTHELLNGPPQRRLWSS
>CP012375.1|AOC51211.1|463773_464853_+|Fructose-bisphosphate-aldolase-class-II
MALVPMRLLLDHAAENGYGIPAFNVNNMEQIQAIMQAAAATDSPVILQASRGARKYAGENFLRHLITAAVETYPHIPIVMHQDHGNEPATCYSAIRNGFTSVMMDGSLEADAKTPATYEYNVNVTAEVVKVAHSIGASVEGELGCLGSLETGKGEAEDGHGFEGELDHSMLLTDPDEAVDFVERTQVDALAVAIGTSHGAYKFTRKPTGEILAISRIEEIHNRLPNTHLVMHGSSSVPEDLLELINQFGGAIPETYGVPVEEIQKGIKSGVRKINIDTDCRLAITAAVREALFSNPKEFDPRFFLKPSITYMQKVCADRYQQFGTAGNASKIKQMSLDDYAAKYAKGQLTQVSKKVVAV
>CP012375.1|AOC51212.1|465059_466283_+|carboxyl-terminal-processing-protease
MWAGLLVGFWFCLTWMAWTPTAAAFSEEQKLLLQSWRLVNQSYYDDTFNHQNWWQVREQFIKKPLNDRTAAYNAIEQMLATLDEPFTRLLRPDQYHNLQISTTGELSGVGLQININPDNGYLEVVAPLAGSPAEAAGLTSHDRILFIDGIDTTTLTLDAAAAKMRGTAGTEVSLVILPYQKSQPKTLSLTRQRISLSPVVAVLDKNSSSLPIGYVRLNQFSANAAKEVSEAVTNLQKQGAKGYILDLRNNPGGLLQAGIEIARMWINQGTIVYTVNREGIADSFAAAGNALTDAPLVVLVNQGTASASEILAGALQDNQRGVLVGEKTFGKGLIQSLFELPDGAGLAITVAKYETPAHHDIHKLGIMPDQVVAQEPITYQEIGTEKDSQYQTAIQFLNQNTVLAKAS
>CP012375.1|AOC51213.1|466715_468020_+|Branched-chain-amino-acid-ABC-transporter,-amino-acid-binding-protein
MQRYIRSPLALTLSISLLANFLTACNNAQTPDNTASSPTTTTPGDQGLKLGALLPITGDLAAIGQNMPEASALAVETINACGGVNGKPVTLVKEDDQTDPAAGASAMTKLAEVDKVAGVIGSFASSVSGAAVDVAVRKKVMLVSPGSTSPVFTDRAKKGDFKGFWARTAPPDTYQAQALAVLAKKKGFQNVATVVINNDYGVGFEREFVSAFDKLGGTITNKQNPVRYDPKAATLDSEAAAAFANQPDAVAAVLYAETGSLLLQAAYKQGLTKGVTVLLTDGVYSEDFTKQVGKGTDGKSIIAGALGTVPGADGQALRAFTSLWKEKTGKDVTAFVPHTWDAAILLMLAAEAAKSNTGEGIQSKIREVANGPGTEVTDACQAMEMIRKGEDINYQGASGNVDIDENGDVVGSYDVWTVKDDGTLKVIDKVTPNQ
>CP012375.1|AOC51214.1|468593_469811_-|Cell-division-protein-FtsW
MQDTSSRKISVWQYIIPIFDPDVKNWSAEARLLRWMTFLWLSVGLVVLFSASYALADSRFDNGLYYFIRQLIWLWIGLIGFNFLVRLPIEKLLKIAPWMILLVLGLILITLIPGLGANINGATRWIKIGPILLQPSEFMKPFLVLQGAAVFGGWPRLNVNQRLTWIAIFGLILAGILLQPNLSTTALCGITLWLIALASGLPLSYMTSSALLGLTMAVVSVTFREYQRKRILSFLDPWQDPRGDGYQLVQSLLAIGSGGTTGSGYGLSQQKLFYLPFPDTDFIFAVFGEEFGFIGGILLLIMLFLYATLALIVAVKCRHRIKKLVAIGAMVILIGQSLLNMGVATGSLPTTGLPFPLFSYGGSSSLASLFLAALLIRVAREENDPDPVPTSKKSPQKTVSVFSHQ

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Crispr_ID: CP012375_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP012375_2

666681-666771

Orphan

Consensus_repeat	Method
GCTAAAAAGTGCTTCAACGCAAATC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP012375_2

>merge|CP012375|2|666681-666771|CRISPRCasFinder
GCTAAAAAGTGCTTCAACGCAAATCCATTTTAGGGATGTCAAATCGGCGAAACCCTTATACAGCGAGCAAAAAAGTGCTTCAACGCAAATC

>CP012375|2|2|666681-666771|CRISPRCasFinder
GCTAAAAAGTGCTTCAACGCAAATC	CATTTTAGGGATGTCAAATCGGCGAAACCCTTATACAGCGA
GCAAAAAAGTGCTTCAACGCAAATC

Protein	Signature genes	Signature genes Name	Protein_function
CP012375.1\|AOC51412.1\|665213_666632_+\|Transcriptional-regulator,-ArsR-family	unknown	unknown	gnl\|CDD\|225420
CP012375.1\|AOC51416.1\|668223_669360_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372192
CP012375.1\|AOC51409.1\|662814_663444_-\|SAM-dependent-methyltransferase-sll0829	unknown	unknown	gnl\|CDD\|379312
CP012375.1\|AOC51417.1\|669520_670870_+\|UDP-N-acetylmuramoylalanine--D-glutamate-ligase	unknown	unknown	gnl\|CDD\|235059
CP012375.1\|AOC51404.1\|659004_659670_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|368753
CP012375.1\|AOC51411.1\|664811_665063_-\|putative-Cytochrome-c-oxidase-subunit-Va	unknown	unknown	unknown
CP012375.1\|AOC51415.1\|667956_668130_+\|DNA-gyrase-subunit-A	unknown	unknown	unknown
CP012375.1\|AOC51405.1\|659710_660706_-\|RuBisCO-operon-transcriptional-regulator	unknown	unknown	gnl\|CDD\|177082
CP012375.1\|AOC51420.1\|674185_675691_-\|Ribosomal-large-subunit-pseudouridine-synthase-A	unknown	unknown	gnl\|CDD\|223638
CP012375.1\|AOC51406.1\|661582_661696_-\|Mobile-element-protein	unknown	unknown	unknown
CP012375.1\|AOC51421.1\|675725_676988_-\|Cysteine-desulfurase	unknown	unknown	gnl\|CDD\|215460
CP012375.1\|AOC51407.1\|661767_661938_-\|Mobile-element-protein	unknown	unknown	unknown
CP012375.1\|AOC51408.1\|662143_662749_-\|HAD-superfamily-(subfamily-IIIA)-phosphatase,-TIGR01668	unknown	unknown	gnl\|CDD\|225090
CP012375.1\|AOC51418.1\|671034_673662_+\|FenI	unknown	unknown	gnl\|CDD\|224563
CP012375.1\|AOC51410.1\|663557_664721_+\|Ferrochelatase,-protoheme-ferro-lyase	unknown	unknown	gnl\|CDD\|178068
CP012375.1\|AOC51414.1\|667826_667943_+\|hypothetical-protein	unknown	unknown	unknown
CP012375.1\|AOC51419.1\|673830_674013_-\|SSU-ribosomal-protein-S21p	unknown	unknown	gnl\|CDD\|234707
CP012375.1\|AOC51422.1\|677043_678546_-\|Iron-sulfur-cluster-assembly-protein-SufD	unknown	unknown	gnl\|CDD\|273908
CP012375.1\|AOC51413.1\|666850_667843_-\|Peptide-chain-release-factor-2	unknown	unknown	gnl\|CDD\|234799
CP012375.1\|AOC51403.1\|658642_658999_+\|transcriptional-regulator,-XRE-family	unknown	unknown	gnl\|CDD\|238045

Protein	Function_ID	Function_description	E-value
CP012375.1\|AOC51412.1\|665213_666632_+\|Transcriptional-regulator,-ArsR-family	gnl\|CDD\|225420	COG2865, COG2865, Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen [Transcription].	2.11227e-69
CP012375.1\|AOC51409.1\|662814_663444_-\|SAM-dependent-methyltransferase-sll0829	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	4.27136e-24
CP012375.1\|AOC51403.1\|658642_658999_+\|transcriptional-regulator,-XRE-family	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	7.87473e-09
CP012375.1\|AOC51404.1\|659004_659670_+\|hypothetical-protein	gnl\|CDD\|368753	pfam06114, Peptidase_M78, IrrE N-terminal-like domain. This entry includes the catalytic domain of the protein ImmA, which is a metallopeptidase containing an HEXXH zinc-binding motif from peptidase family M78. ImmA is encoded on a conjugative transposon. Conjugating bacteria are able to transfer conjugative transposons that can, for example, confer resistance to antibiotics. The transposon is integrated into the chromosome, but during conjugation excises itself and then moves to the recipient bacterium and re-integrate into its chromosome. Typically a conjugative tranposon encodes only the proteins required for this activity and the proteins that regulate it. During exponential growth, the ICEBs1 transposon of Bacillus subtilis is inactivated by the immunity repressor protein ImmR, which is encoded by the transposon and represses the genes for excision and transfer. Cleavage of ImmR relaxes repression and allows transfer of the transposon. ImmA has been shown to be essential for the cleavage of ImmR. This domain is also found in in metalloprotease IrrE, a central regulator of DNA damage repair in Deinococcaceae, HTH-type transcriptional regulators RamB and PrpC.	1.05196e-07
CP012375.1\|AOC51405.1\|659710_660706_-\|RuBisCO-operon-transcriptional-regulator	gnl\|CDD\|177082	CHL00180, rbcR, LysR transcriptional regulator; Provisional.	0
CP012375.1\|AOC51416.1\|668223_669360_-\|hypothetical-protein	gnl\|CDD\|372192	pfam12565, DUF3747, Protein of unknown function (DUF3747). This family of proteins is found in bacteria. Proteins in this family are typically between 215 and 413 amino acids in length. There is a conserved DSNGYS sequence motif.	6.47394e-93
CP012375.1\|AOC51420.1\|674185_675691_-\|Ribosomal-large-subunit-pseudouridine-synthase-A	gnl\|CDD\|223638	COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis].	1.63942e-65
CP012375.1\|AOC51421.1\|675725_676988_-\|Cysteine-desulfurase	gnl\|CDD\|215460	PLN02855, PLN02855, Bifunctional selenocysteine lyase/cysteine desulfurase.	0
CP012375.1\|AOC51417.1\|669520_670870_+\|UDP-N-acetylmuramoylalanine--D-glutamate-ligase	gnl\|CDD\|235059	PRK02705, murD, UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase.	0
CP012375.1\|AOC51418.1\|671034_673662_+\|FenI	gnl\|CDD\|224563	COG1649, COG1649, Uncharacterized protein conserved in bacteria [Function unknown].	2.74349e-60
CP012375.1\|AOC51410.1\|663557_664721_+\|Ferrochelatase,-protoheme-ferro-lyase	gnl\|CDD\|178068	PLN02449, PLN02449, ferrochelatase.	0
CP012375.1\|AOC51419.1\|673830_674013_-\|SSU-ribosomal-protein-S21p	gnl\|CDD\|234707	PRK00270, rpsU, 30S ribosomal protein S21; Reviewed.	2.78795e-12
CP012375.1\|AOC51422.1\|677043_678546_-\|Iron-sulfur-cluster-assembly-protein-SufD	gnl\|CDD\|273908	TIGR01981, UPF0051_protein_Rv1462/MT1509, FeS assembly protein SufD. This protein, SufD, forms a cytosolic complex SufBCD. This complex enhances the cysteine desulfurase of SufSE. The system, together with SufA, is believed to act in iron-sulfur cluster formation during oxidative stress. SufB and SufD are homologous. Note that SufC belongs to the family of ABC transporter ATP binding proteins, so this protein, encoded by an adjacent gene, has often been annotated as a transporter component. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	1.40162e-101
CP012375.1\|AOC51413.1\|666850_667843_-\|Peptide-chain-release-factor-2	gnl\|CDD\|234799	PRK00578, prfB, peptide chain release factor 2; Validated.	0
CP012375.1\|AOC51408.1\|662143_662749_-\|HAD-superfamily-(subfamily-IIIA)-phosphatase,-TIGR01668	gnl\|CDD\|225090	COG2179, COG2179, Predicted hydrolase of the HAD superfamily [General function prediction only].	6.50792e-58

>CP012375.1|AOC51412.1|665213_666632_+|Transcriptional-regulator,-ArsR-family
MINLETLEGWLNAPVENERLEFKQAKNQFDTIKLLKYCVALANEGGGHFILGVTDKRPRKIVGSQAFPTPEEINSIKSLIVQKLRLRVEITELAHPDGRVLVFEVPTRPTGQPIAFEGAYLMRAGEDLVPMTPDRLKRIFAEDQQDWFCQSARSHASPDEVIDLLDTQTYFELLKLPYPSHRDAVLERLQSDQLLDKTSKGWTIPNLSAILLARQLESFSPTLARKAPRVIIYEGTGKIKTRLEQTVTKGYAVGFDGLVNFVHDLAPQNRVIEEVLREEVKMFPRQALRELIANALIHQDFLATGASVMIEMYDDRVEISNPGIPFIKVERFIDEYRSRNEQLADIMRRFGICEEKGSGIDKVISAAEKFQLPAPDFRVGEIRTTSILFAHQDFGKMSQSDRIRACYQHCCLLYVDNQRMSNQTLRNRFCLNESKNNTVSQVIGATKEAGLIKLDESESKSTRYARYLPFWA
>CP012375.1|AOC51411.1|664811_665063_-|putative-Cytochrome-c-oxidase-subunit-Va
MVIIEITNVEEILSAKIGSFAAKIVQALADDEGKVEEVLIKELQANFQERGIKANLFSVTGLDMLGNGRLEVNVNVRSANMMS
>CP012375.1|AOC51410.1|663557_664721_+|Ferrochelatase,-protoheme-ferro-lyase
MGRVGVLLLNLGGPERLEDVRPFLFNLFSDPEIIRLPIKGLQKPLAWLISTLRASKSQENYRQIGGGSPLLKITEAQATALQQRLAEMGREVSVYIGMRYWNPFTEEAIERIKRDHIKKLVILPLYPQFSISTSGSSFRVLEEMWQQDPYLRLTEYTLIPSWYDHPTYLSAMADLIARELEQCPNPDQVHIFFSAHGVPQSYVEEAGDPYQREIEECTRAIMRTLNRPNQYTLAYQSRVGPVEWLKPYTEDALKGLGEQGIKHLLVVPISFVSEHIETLQEIDIEYREVAEEAGIEHFQRVPALNTHPMFIESLSQLVVKSLEENPTTFEQITHPKANMKMYPQERWEWGMTTAAEVWNGRLAMIGFLAIIIELITGQGPLHFVGLL
>CP012375.1|AOC51409.1|662814_663444_-|SAM-dependent-methyltransferase-sll0829
MILATILRPLSYQYQWLYDGISRLAALAVGGENRFRQLALEGLKIAKNDPILDLCCGAGQTTRYLVPLSDHCTGLDVSPRALERASLAVPQAHYVEGLAEKMPFSAGEFALVHTSAALHEMEPEQLEEILKEVYRVLRPGGIFALVDFHRPTNPLFWPSLALFLQLFETDTAWQFIDRDLIRSLQAIGFRDCQQKLYAGGSLQVIQAAK
>CP012375.1|AOC51408.1|662143_662749_-|HAD-superfamily-(subfamily-IIIA)-phosphatase,-TIGR01668
MSKLSSINSLPVIFEKLMTRAKILQPDLILGDTILGLTLEILSQHQIKGLILDVDDTLVPLQETTVSDDLQRWVDSLRLYLPIWLVSNNLSENRIGAIADNLQLPYLLGAVKPSRRKLRQAMAAMSLPPQQIAMVGDRLFTDVLAGNRLGMFTILVKPMVNPLTGGAAYPIHDFEVWISQILGVSLHPQHYFIKPDQSSQK
>CP012375.1|AOC51407.1|661767_661938_-|Mobile-element-protein
MICVFRIKGSGHDFSLFKKSRVRFHPLATSIEDSSYQGISQYHSNIYTPKNRNSQA
>CP012375.1|AOC51406.1|661582_661696_-|Mobile-element-protein
MKILSCKYRNSRLRYGLIVNLLAAIYNYELGISTEAS
>CP012375.1|AOC51405.1|659710_660706_-|RuBisCO-operon-transcriptional-regulator
MTDIPFTLDQLRILKAIAAEGSFKRAADTLYVSQPAVSLQVQNLEKQLNVPLFDRGGRKAQLTEAGHLLLSYGEKIITLCQETCRAIEDLQNLQGGTLIVGASQTTGTYLLPRMIGLFRQKYPEVSVQLQVHSTRRTSWSVANGQVDLAIIGGEVPAELQETLRIIPYAEDELALVLPIFHPLSKVEMIQKEDLYRLKFITLDSQSTIRKVIDKVLTRCEIDTKRLKVEMELNSIEAIKNAVQSGLGAAFVSVTAIEKELQMGVIHATRIKDVEIRRTLSVIINPNRYRSKAAEAFTLEILPQFSTYPEYLADDHNFEPIPNSQTAEIISK
>CP012375.1|AOC51404.1|659004_659670_+|hypothetical-protein
MDIIKPYSFIPKTEIEAQADNILKKVKAHRRRPLKNCDIAEAAADHFDLAIEWTDIKPDKEGEIAAMIIPIEKKIILNEDVKFLKDSQNSSLAKEGFKNSSLAHEIGHFVLHINQTAVSNFFERINQGDSLGTIQPFLCRTVDSSQRIEWQAQYFASCLLMPMSELEKAIKGRDLTKWGLLYAIADELGVTITNLRSRLESLHWIKVDKKVIYRGSNFPKR
>CP012375.1|AOC51403.1|658642_658999_+|transcriptional-regulator,-XRE-family
MSETFGQVIRKARREEEYSQRELAKLIGVDYTYLSKLENDHAGYPPSQQVIESLATHLKLNAQTLGELAGRISSDDQKVFKELVQKYQQMPILLRRMKDNPNFAKKVISEATKLEPEE
>CP012375.1|AOC51413.1|666850_667843_-|Peptide-chain-release-factor-2
MAAVPTFWDNPDTAQKTLQELNECKSSLETYQGWCEQLEDTKAIIELLELESDRTLLEEATDNLTHLQHDLDRWELQQLLNGPYDAKGAVLTINAGAGGTDAQDWTEMLLRMYSRWAEKQGYKVTLAEISEGDEAGIKSVTIEIAGTYAYGYLKGEKGTHRLVRISPFNANGKRQTSFAGVEVMPILGDDAVRVEIPDKDLEITTTRSGGKGGQNVNKVETAVRVVHLPTGIAVRCTQERSQLQNKEKALALLKAKLLIIAREQQAQAIAEIRGDMVEAAWGNQIRNYVFHPYQLVKDLRSNVETTDVTRVMNGDLDSFIEAYLRLGGAV
>CP012375.1|AOC51414.1|667826_667943_+|hypothetical-protein
MGTAATCSKSLILALKVGKSKIVLGFTQAQSYYLDTFF
>CP012375.1|AOC51415.1|667956_668130_+|DNA-gyrase-subunit-A
MFSVISYQLSVISYSRSQESGESVPMKKFSPPQRKEVSFPTPHTLHPLSSQEAGVES
>CP012375.1|AOC51416.1|668223_669360_-|hypothetical-protein
MNLKSSLKFTLLFSLLGGCLLTTPSQATLFEQREVNQEDFIAIARPYGNGKYDLLILQQIQGKRQCWAVNGTEPTIVQPLLLDFDFTGSCERATDSNGYSLRIQGKDYGLEYLLRIVQRNGELVLVGTPRNPRQSEVIIGRTKGLGTGLIQIYLIDGWRFTKRSLAGQNLSHIYLTADSPNFNPPPELLAGNSYSLPRESVKAETPVNPPGDPEVREYTFTAAETAVQSNPEPVVTNPVPEQNSTPAPPVTSNLPPLTPPLRLGSGQANAQNNNAIVPPPPPRNLGNQRSLSDVITFNRPAANPSSGNTSNSGRKGFKVVIEAKNESDRSKVRSLYPDAFPTSHQGRRVWQIGAFSSRDKAENALQSLAPLRGSIVPF
>CP012375.1|AOC51417.1|669520_670870_+|UDP-N-acetylmuramoylalanine--D-glutamate-ligase
MAKAAIIGLGRSGIAAARCLKRDGWQVTLSDRSDSPSLQATKTNLESEGIIVNLGQNLSLGASDLPDLIVVSPGVPWDAPILITAREKGIDTIGELELAWRYLQSSPWLGVTGTNGKTTTTALCAAIFQKAGLNAPSCGNIGYAACELALKADKYDWIIAEISSYQIESSRDLSPKIGIWTTFTPDHLSRHQTLENYYQIKASLLQRSDRQILNGDDPYLRQIGVSQWQQAYWTSVQGKEALLGDPSRGVYLQDNWIVAFGELIAPVNLLKMVGSHNQQNLLMAVAAARLAGIEKKAITEAIATFPGVAHRLEYVCTYKGLDFINDSKATNYDAAAVGLKSVPSPAILIAGGEAKAGDDRAWIAEIKAKVATVLLIGDAAADFARRLQSAGYQDYECVETMDRAVQRAAELGLAKAAKVVLLSPACASFDQYQSFEHRGDHFRQLSLQL
>CP012375.1|AOC51418.1|671034_673662_+|FenI
MLGSSFRLDHLFKKRLITCLFSCVAVLLPIPVLATPVAVLKSQENANQWTAITDRLQNVGVNYCILQSNQWQSDADLNKIKVLIIPNVETISGLQASVLSRWLNRGGKIIVTGPAGNLSEPAVRDQLRSLFGAYWAYPHSQAYTLRPTNLGEVKNQKPLASSLLGGVVIPTGVNSQTVAVWGARNNPPAVVLNNNSIFLGWRWGSDAVANLALDSAWLETALQRYGINRSSSLNTIAPYCQGNSTIVNNINNTPTATAPRPPLPQISENPPSETARLSPNTEAIPPRASLTPQQISQMTAELQGLIGRYGATLLALEASNSNISNTDKSLAQAFHNRAKNSPTTDTARRFRLALENAQGALNNFQNLIAQGDYTQAREFWLQARRNLWDHYPTNRQFAQPEIRAMWLDRGTIVEAKNEEDLAKVFDRMAAAGINVVFFETVNASYTIYPSQVAPEQNPLTRGWDPLKVAVKLAHERNMEIHAWVWVFAAANQAHNKVLEQPLDYLGPVLSRNPDWGATNKSGGSFDYSQGTKKAFFDPANPDVQNYLLSLYEEIVKNYDVDGLQLDYIRYPFQNQNSNQTYGYGKSSRWLFKQMTGVDPITLNHRGALWEQWTSFKIRHVDTFVSQVSTRLKQIRPHLKISAAVFPIEQKERLYRIQQNWEEWGQNQWIDLIFLMTYALDTGTLEEKTQSLFDRKIAGNALIVPGIRLLKVPDQVTIDQLQFIRNLPTSGFALFATENLNPNLQTILNRIQGSIITKKAEPLPHRQPFKTAAARFNSLRQEWSFLIVNNLWAMEERTLKAWGQEVDEMANLLEQLATNPSPRNLTLTQNALKRFSYQFKSVMSRQKDLSAYQIQVWENRLATLQSLLSYGQRVEF
>CP012375.1|AOC51419.1|673830_674013_-|SSU-ribosomal-protein-S21p
MTQVVVGQNEAIESALRRFKRQVAKAGIYADIKKHQFFETPQEKRKRKAVARRRQRTRRR
>CP012375.1|AOC51420.1|674185_675691_-|Ribosomal-large-subunit-pseudouridine-synthase-A
MKEVTYYYQGICPETGELLRLPRTLLAEKIAQDLMTTITNPQGKMYGILLGENAAGEIEILKAFSGQGEAAGWVPSLVGREKIMLEEKRVLQLLETIKQEIITLQSIPEHNLYRLNQANFECKIQALQQQHQNHKQERNRLRNLGNLKPEELEKLNNISRQEKRARKQLKQEQKQVLDPLIDKINVANQRIIELKQQRRKLSKQLQELLYQSYCLNNFSGQSLSLAKLMGSNLLPTGTGECCAPKLLNYAAMKGLKPVAMAEFWWGESNRDRKQGEFYGACQERCQPLMGFLLSGLRSSLEIIYEDEGIIAINKPAGLLSVAGRYQDSQDAVVNRFRRQGKNVIPVHRLDRETSGILLLAKSLDIYRCLSQQFQRREVEKIYEAILSEVVERESGIIDLPLWGNPQNRPYQTVDWQRGKASQTYFKVIGKEGNYSRLEFIPYTGRTHQIRVHSQAGLGIGILGDLLYNGKQSDRLYLHAKQLSFRHPQTETKLDLIIPTPF
>CP012375.1|AOC51421.1|675725_676988_-|Cysteine-desulfurase
MTIIQEKTLAQKVRADFPILHQTVHDKPLIYLDSAATSQKPIQVLETLRNYYEKDNANVHRGAHTLSVRATEAYEGARDKVARFINAASRQEIVYTRNATEAINLVAYSWALNTLKAGDEIILSVMEHHSNLIPWQIVCQKTGAVIKYVQLTSEESFDLEQYKSLLSDKTKLVAVLHVSNTLGCINPVAEIVSLAHQVGAKVLIDACQSVPHLAIDVQSIDCDWLVASGHKMCAPTGIGFLYGKEAILEAMPPFFGGGEMIAEVYLDHFTCAELPHKFEAGTPAIGEAIALGAAVEYLMGLGMDNIHAYEEELTAYLFKKLGEIEGLRIYGPPPSLTGQGRASLAAFNVEGIHASDLATLLDHEGIAIRSGHHCTQPLHRLFDASGSARASLYFYNTREEIDSFIVALQETIDFFANCFS
>CP012375.1|AOC51422.1|677043_678546_-|Iron-sulfur-cluster-assembly-protein-SufD
MKKFSPPEMKEVSFPTPHTPHPTPHYPTTPLPHYPTTPLPHTPHPTPYTPTPKPHPLLPMTAIITKPEQSGELLLKLSRETVPTIDNGKILELRESGASKAQELAIPGRKDEEWQFTDLSQLWAIDFRAPQTVTIDKNALAVFLLPEAKNSHLVFVNGIYQPELSDISALPPGVSVGNLANAQKDVLVNYLGKEKTPEFFTALNQAGLSDGAVIHVTANTVVTTPIHLLFITVVEEIPRFYQPHSLIVAETGASVNIIENYGALAEHCSDLPVNYSYFTNAVTEIYLEANAEVIHTRVQRESGDGFHIGRTIIEQAHDSRYTLNEINLGAKLCRHNLDVLQKGEQTETNLHGLAMITGQQTADTHSAIYLNHPHGITKQLHKCIVDGSAHAIFNGKVFVPKPAQLTNASQLNRNLLISNKARVNTKPELQITADNVKCSHGATVSQLEADDLFYLQSRGLSADTARSLLIDAFSAEILAKIPLESLRQRLGQCVACRSVE

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Click the colored protein region to show detailed information

Crispr_ID: CP012375_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP012375_4

1038172-1038271

TypeV-U4

Consensus_repeat	Method
TTGTCAAAAGACAAGCTGTCAAACTTG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP012375_4

>merge|CP012375|4|1038172-1038271|CRISPRCasFinder
TTGTCAAAAGACAAGCTGTCAAACTTGGTGTAGAATGAATCAATGGGACAGTTAAAAGCAAACTTTTACTTTTTTGTCAAAAGACAGGCTGTCAAACTTG

>CP012375|4|4|1038172-1038271|CRISPRCasFinder
TTGTCAAAAGACAAGCTGTCAAACTTG	GTGTAGAATGAATCAATGGGACAGTTAAAAGCAAACTTTTACTTTT
TTGTCAAAAGACAGGCTGTCAAACTTG

Protein	Signature genes	Signature genes Name	Protein_function
CP012375.1\|AOC51767.1\|1034460_1034886_+\|Mobile-element-protein	unknown	unknown	gnl\|CDD\|315923
CP012375.1\|AOC51773.1\|1039122_1040850_+\|Succinate-dehydrogenase-flavoprotein-subunit	unknown	unknown	gnl\|CDD\|180319
CP012375.1\|AOC51779.1\|1046921_1047179_+\|RelE/StbE-replicon-stabilization-toxin	unknown	unknown	gnl\|CDD\|224937
CP012375.1\|AOC51763.1\|1031051_1031240_-\|hypothetical-protein	unknown	unknown	unknown
CP012375.1\|AOC51769.1\|1035227_1035521_-\|hypothetical-protein	unknown	unknown	unknown
CP012375.1\|AOC51781.1\|1047833_1048172_+\|fdxN-element-excision-controlling-factor-protein	unknown	unknown	gnl\|CDD\|341357
CP012375.1\|AOC51770.1\|1035993_1037673_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|371750
CP012375.1\|AOC51764.1\|1031397_1032288_-\|hypothetical-protein	unknown	unknown	unknown
CP012375.1\|AOC51774.1\|1041813_1045581_+\|HEAT-repeat	unknown	unknown	gnl\|CDD\|227922
CP012375.1\|AOC51776.1\|1046145_1046415_+\|RelE/StbE-replicon-stabilization-toxin	unknown	unknown	gnl\|CDD\|224937
CP012375.1\|AOC51762.1\|1030657_1030777_-\|hypothetical-protein	unknown	unknown	unknown
CP012375.1\|AOC51771.1\|1037789_1038056_-\|Cytochrome-C553-(soluble-cytochrome-f)	unknown	unknown	gnl\|CDD\|184253
CP012375.1\|AOC51765.1\|1032465_1033548_+\|photosystem-II-protein-D1-(PsbA)	unknown	unknown	gnl\|CDD\|130221
CP012375.1\|AOC51766.1\|1033816_1034329_+\|Mobile-element-protein	unknown	unknown	gnl\|CDD\|379256
CP012375.1\|AOC51780.1\|1047216_1047390_+\|tetratricopeptide-protein	unknown	unknown	unknown
CP012375.1\|AOC51778.1\|1046681_1046915_+\|hypothetical-protein	unknown	unknown	unknown
CP012375.1\|AOC51768.1\|1034974_1035238_-\|RelE/StbE-replicon-stabilization-toxin	unknown	unknown	gnl\|CDD\|224937
CP012375.1\|AOC51775.1\|1045945_1046149_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|375932
CP012375.1\|AOC51777.1\|1046468_1046600_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235029
CP012375.1\|AOC51772.1\|1038302_1038680_+\|Plastocyanin	unknown	unknown	gnl\|CDD\|235060

Protein	Function_ID	Function_description	E-value
CP012375.1\|AOC51773.1\|1039122_1040850_+\|Succinate-dehydrogenase-flavoprotein-subunit	gnl\|CDD\|180319	PRK05945, sdhA, succinate dehydrogenase/fumarate reductase flavoprotein subunit.	0
CP012375.1\|AOC51774.1\|1041813_1045581_+\|HEAT-repeat	gnl\|CDD\|227922	COG5635, COG5635, Predicted NTPase (NACHT family) [Signal transduction mechanisms].	8.79134e-39
CP012375.1\|AOC51767.1\|1034460_1034886_+\|Mobile-element-protein	gnl\|CDD\|315923	pfam13358, DDE_3, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	1.18362e-10
CP012375.1\|AOC51779.1\|1046921_1047179_+\|RelE/StbE-replicon-stabilization-toxin	gnl\|CDD\|224937	COG2026, RelE, Cytotoxic translational repressor of toxin-antitoxin stability system [Translation, ribosomal structure and biogenesis / Cell division and chromosome partitioning].	5.74279e-16
CP012375.1\|AOC51772.1\|1038302_1038680_+\|Plastocyanin	gnl\|CDD\|235060	PRK02710, PRK02710, plastocyanin; Provisional.	1.1168e-69
CP012375.1\|AOC51766.1\|1033816_1034329_+\|Mobile-element-protein	gnl\|CDD\|379256	pfam13551, HTH_29, Winged helix-turn helix. This helix-turn-helix domain is often found in transferases and is likely to be DNA-binding.	1.23677e-05
CP012375.1\|AOC51770.1\|1035993_1037673_-\|hypothetical-protein	gnl\|CDD\|371750	pfam11832, DUF3352, Protein of unknown function (DUF3352). This family of proteins are functionally uncharacterized. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 538 to 575 amino acids in length.	1.41702e-176
CP012375.1\|AOC51776.1\|1046145_1046415_+\|RelE/StbE-replicon-stabilization-toxin	gnl\|CDD\|224937	COG2026, RelE, Cytotoxic translational repressor of toxin-antitoxin stability system [Translation, ribosomal structure and biogenesis / Cell division and chromosome partitioning].	3.04834e-08
CP012375.1\|AOC51771.1\|1037789_1038056_-\|Cytochrome-C553-(soluble-cytochrome-f)	gnl\|CDD\|184253	PRK13697, PRK13697, cytochrome c6; Provisional.	3.47907e-41
CP012375.1\|AOC51765.1\|1032465_1033548_+\|photosystem-II-protein-D1-(PsbA)	gnl\|CDD\|130221	TIGR01151, Photosystem_QB_protein, photosystem II, DI subunit (also called Q(B)). This model describes the Photosystem II, DI subunit (also called Q(B)) in bacterial and its equivalents in chloroplast of algae and higher plants. Photosystem II is many ways functionally equivalent to bacterial reaction center. At the core of Photosystem II are several light harvesting cofactors including plastoquinones, pheophytins, phyloquinones etc. These cofactors are intimately associated with the polypeptides, which principally including subunits DI, DII, Cyt.b, Cyt.f and iron-sulphur protein. Together they participate in the electron transfer reactions that lead to the net production of the reducting equivalents in the form of NADPH, which are used for reduction of CO2 to carbohydrates(C6H1206). Phosystem II operates during oxygenic photosynthesis and principal electron donor is H2O. Although no structural data is presently available, a huge body of literature exits that describes function using a variety of biochemical and biophysical techniques. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis].	0
CP012375.1\|AOC51781.1\|1047833_1048172_+\|fdxN-element-excision-controlling-factor-protein	gnl\|CDD\|341357	cd16382, XisI-like, XisI is FdxN element excision controlling factor protein. This family contains XisI proteins, also known as FdxN element excision controlling factors, and similar proteins. FdxN element is excised from the chromosome during heterocyst differentiation in cyanobacteria. This is accomplished by the large serine recombinase XisF (fdxN element site-specific recombinase). The xisH as well as the xisF and xisI genes are required. XisI may function as recombination directionality factor (RDF), and needs XisH which may function as an endonuclease.	3.33036e-54
CP012375.1\|AOC51768.1\|1034974_1035238_-\|RelE/StbE-replicon-stabilization-toxin	gnl\|CDD\|224937	COG2026, RelE, Cytotoxic translational repressor of toxin-antitoxin stability system [Translation, ribosomal structure and biogenesis / Cell division and chromosome partitioning].	1.46248e-14
CP012375.1\|AOC51777.1\|1046468_1046600_+\|hypothetical-protein	gnl\|CDD\|235029	PRK02308, uvsE, putative UV damage endonuclease; Provisional.	0.00917656
CP012375.1\|AOC51775.1\|1045945_1046149_+\|hypothetical-protein	gnl\|CDD\|375932	pfam18506, RelB_N, RelB Antitoxin alpha helical domain. This is an alpha helix domain found in the N-terminal region of antitoxin RelB. RelE-RelB (RelBE) is a toxin-antitoxin (TA) protein complex. It is suggested that the toxic action of RelE is counteracted by antitoxin RelB, which wraps around RelE, blocks its active site and prevents sterically the binding to the ribosomal A-site.The long N-terminal alpha-helix of the tightly bound antitoxin RelB covers the presumed active site of the toxin RelE that is formed by a central beta-sheet.	1.82243e-11

>CP012375.1|AOC51771.1|1037789_1038056_-|Cytochrome-C553-(soluble-cytochrome-f)
MARPALADGASIFSANCASCHMGGKNVVNAAKTLKKEDLVKYGKDSVEAIVTQVTKGMGAMPAFGGRLSAEDIEAVANYVLAQAEKGW
>CP012375.1|AOC51770.1|1035993_1037673_-|hypothetical-protein
MKLRSFFYILGATVIILLVVATASFAWILADSPLSLLKGGVLREPMAAIFVPKQAPVMVSLLVNPERLESFGQLIATPANRRRSHQQIKDLEKSLLGKTGLNYQKEIKPWLGEEITLAVTSLDFDRDTDNGIQPGYLLAIQSKDGERAKEFLQASYSKQAVSGKFDLVFELYKGVNLIYQRPLTAGDNNRFLASAVVGDTVLFANNIKVLREALNNVQVPDLNLKNSPDYREALKNITEPRIAIVYGNLPPLSAWIANQPVPESPEAKQRLATAFTLKSGGIVAQTALIGVLGQDDQAPILSSPVGALSFIGENSLLVAASRDLNRFWTQVEEGLEADSPLQELITQVLNRFQSPLGLNLPEDVFSWVRGEYSLALVPSSKGMEPDSVFLGERVMGVEVDSAIEHLDELARSRGYNVVNLPLLDRTVTAWTKLTTAVPGGKAQLETLVTGVHTRVDNYEIIASSVEAMGLALSAQKNPILSSGKFRQAITALPAENDGYFYVDWRQLQPVIEAKFPIVRVLELSIKPLFNNLRSLTISSQGSENSVRRGTIFFNLGVKS
>CP012375.1|AOC51769.1|1035227_1035521_-|hypothetical-protein
MNITDVQVNLSTSEDFLDSETLAQIDLMQQKIQQYLQTLSLENLKTILEFAAYLSDKESEQATQEIREIPNIIEKLKEAEMDLQSGHLIDWKNSDDL
>CP012375.1|AOC51768.1|1034974_1035238_-|RelE/StbE-replicon-stabilization-toxin
MIYKVCLTAKANKVYSEADSVLRKKIAKCLKILQETPKNHPQIKALKGEFAGKYRFRVGDYRVIYIVDDSQSQVIVLLIEHRSQAYR
>CP012375.1|AOC51767.1|1034460_1034886_+|Mobile-element-protein
MHPRYEWLYVYGFVEPKTGKTLWYLIPRVNHQWLSLVYQSLAKDVVLSAEKIVLLVQDNAGWHRSQKLEVPDGIMLDFLPAYSPELQPAERLWSLVDEPLVNQYFETIEEIEEILITRCQYLETMTNEIKNLTNYHWLTYD
>CP012375.1|AOC51766.1|1033816_1034329_+|Mobile-element-protein
MPKKAYLAEHLSSEELKDRYRASQDSVETRRWHLLWKISLGWTIKNAAVAVGLDYQYSFKILKRYNELGEEGVKNLKKKSHEHRRGKEPLLKEEQWQKLKEELKKRPADGGIWTGPKVARWIEKETGREKVWNQRGWDYLKKFRYSCQEPRPKHKNSNQLNQKNLSRISQ
>CP012375.1|AOC51765.1|1032465_1033548_+|photosystem-II-protein-D1-(PsbA)
MTTTLQQRESASLWEQFCQWITSTNNRLYVGWFGVIMIPTLLTATTCFIIAFIAAPPVDIDGIREPVAGSLLYGNNIISGAVVPSSNAIGLHFYPIWEAASLDEWLYNGGPYQLVIFHFLLGVFCYLGRQWELSFRLGMRPWICVAYSAPVSAATAVFLIYPIGQGSFSDGMPLGISGTFNFMFVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLVRETTEIESQNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLGAWPVIGIWFTAMGVSTMAFNLNGFNFNQSILDSQGRVIGTWADVLNRAGIGMEVMHERNAHNFPLDLASGEQAPVALTAPAING
>CP012375.1|AOC51764.1|1031397_1032288_-|hypothetical-protein
MTRQPHDQFAKQYLEELLSPLGKVEVSKEVADETRQVDIFFSPHPNMRGNAQFLGLLGQMVTTSTLLEPFRNAPNRTEIRNCILKLFSIFAELQRKGKREKTELNEDDLPRLWILATSISFQILESFDAKLELENWTEGIYFLSPSHRTAIIAINQLPITPDTLLLRLLGRGKTQSQAVRELLELPSGDSFRQNVMELLISWRVSVEINNLLESEDREVFMALSQSYLEWKEATKREGLQQGQRQIIENLMQVRFGELDESLIKVIDELLKLSPMESSRLLLESSREDLIRRFLSE
>CP012375.1|AOC51763.1|1031051_1031240_-|hypothetical-protein
MPPDRTIPSNEEPIVARETDKATRFHFNKVAIASLLSITAKTFSGDNSSNIWTTEISKEQSP
>CP012375.1|AOC51762.1|1030657_1030777_-|hypothetical-protein
MQTILTPKLAKLNFSRFSIAILAHPSTALFSHEDFYQEK
>CP012375.1|AOC51772.1|1038302_1038680_+|Plastocyanin
MKKLGLLVATVVLVVSSFFFNTASAAAETFTVKMGGDAGTLQFDPPTLTIKAGDTVKWVNNKLSPHNIVFDSTKVPEAQASKLSHKGLAFSAGESFESTFSEPGTYTYYCEPHRGAGMVGTITVQ
>CP012375.1|AOC51773.1|1039122_1040850_+|Succinate-dehydrogenase-flavoprotein-subunit
MKEHDVVIVGGGLAGCRAALEIKRLNPTIDVAVVAKTHPIRSHSVAAQGGIAAALQNVDPKDNPKAHAYDTVKGSDFLADQDAVDILTQEAPEVIIELEHLGVLFSRLEDGRIAQRAFGGHSHNRACYAADKTGHAMLHELVSNLHRNQVKIYDEWYVLRLILEEGTAKGVVMYQIATGQLEILRAKAIMFGTGGYGRVYNTTSNDFACTGDGLALSAKAGIPLEDMEFVQFHPTGLYPVGVLISEAVRGEGAYLINSEGRRFMEDYAPSRMELAPRDITSRAITLEIRAGRGVNLDGSAGGPFVYLDLRHLGREKIMSRIPFCWEEAHRLVGVDAVEEPMPVRPTVHYCMGGIPVNTDGRVRLSADTLTEGFFSAGECSCVSVHGANRLGSNSLLECVVYGRRTGKSIAKYVEKRAFPVFNPDIYLQDAKEEITALLTKKGTIRIGQLRQQFQDCMTQHCGVFRTEATMREGIKQIGELKRKYEQIYLDDRGDCWNTELIEAWELQSLMVVGEIILTSALNRQESRGAHSREDFPQRDDQNFLQHTLAYYSPSGIDIDYMPVVIQDFTPVERKY
>CP012375.1|AOC51774.1|1041813_1045581_+|HEAT-repeat
MSKERKQRGILATPTGKQKLQEAKANGRNELGKKLTYDNIAEKAVVDKKTVERFMRRLQLIDRDNALAICQALGLEITDVVDSDEWNYDESSNTEINWTEICQQALINKPLRRFATDEPCELEIFVPLGLVERKKQQRRPLNQEMERNQVYEVEEKEEITRRFEHEEFLNYIGLGTTQGESDKNIAIIGEPGAGKTTLLQNLALIISDQQKGLPICVSLGALSKERSLIGYLEETWLRDGLAVGEVKESDKADFRQLFDKKQVWLLLDGLDEYSADSPVEALTWIENEVRSGYLQKARVVVSCRVNVWDANINPLRAFVTYKTLDFADFQRDQFIRQWFGKKGNIALGEQLIACLQETGRERIWELVKNPLRLVLLCQIWSLGEGSLPETKAQFYQRYLPYFYEWKREIRDLTDNDELQELLHQALGKLAIASLGGESRYRMPRKLAKAIMGNDLFKLAVDFGWLNIVDRDQATDEAVYAFFHPTFQEFFAACGVEDWDFFLPRNHVDRPVEGKVYRIFEAKWKEVILLWLGRSDVKDEEKEAFIKALVEFKDGCGEWNLPEVDRGFYEYRAYFMAANGIKEFNTCSFADKIVHQIIKWNIVNDKPLYMTTGYKLDFGNHLKTHVNKVSSVSVYADHISVYYASLQETDTKRVISKLIDLSLENNSILENNSIIEFLEIIGQDNKNAIIALINMIESLSYNDEIRSHAIKSLGKIGKGNTEAISELINIIKSTSYNYEIRSHAIKSLGEVGKGNIEAISELINIIKSNESTFYFYNDKNGTLNHAVESLGKIGKGNIEAISELINMIKSTSYNDAIRSQAIKSLCEIGKGNTEAISELINIINSTSYNDKIRSRAAYSLGRIESGNSEAISALIRLMQSPDSKIVNFALKSLIEIGKNNSDIISILVDIMQSHSPDSKIGDFAIKSLVEIGKENSDMIPILVDIIQSHSIKATIVSTALENLAKIGQGNLQAINTLISILESLQSQDMSLQSEDMMSESCRSRDLILASAAESLGEIGQSDPRTIAVLIHALRPLYKNYFLMQKLATRSLIKIGINNSNVINQLVNSLQSLNDQESSYWWEIIILEDIGKRDKNVIKILKKLLLVASNNNHSYSHRIKLASALGKVEPGNSEAYETLIEIFISTQNLDAIKTLTEILEDKPISLVVAQKIGDYFVNNISKKMSISKKYYETIYAFFYKFTQIYSYGKFYEIWNNSFYAFQAVQINAVQINDEIDEVSAKLLQILEKYRKKPRKKQ
>CP012375.1|AOC51775.1|1045945_1046149_+|hypothetical-protein
MNIKDYPFAQDLITDNQGQIQQVIINFEDYQQIIETYEDTGLYRAMIDVKDETPLTLEEALIELEKE
>CP012375.1|AOC51776.1|1046145_1046415_+|RelE/StbE-replicon-stabilization-toxin
MKINYLPTFIKDLKDLKSTSSYSVIKNLVFTDILAVKQLSEINNLKKLKGEYNAYRIRIGDYRIGFFVEEDTITFARVLHRREFYRYFA
>CP012375.1|AOC51777.1|1046468_1046600_+|hypothetical-protein
MNHCDRAFNYCQEALELCQELGIPLVKNCEELLGQIQATLEGD
>CP012375.1|AOC51778.1|1046681_1046915_+|hypothetical-protein
MSTTINLKITFESLTEAIKSLDLTQKQQLLEILEQQIFQAEETSYQDDEETLAELQQVRDEYQSGDYVTLEQYLSKD
>CP012375.1|AOC51779.1|1046921_1047179_+|RelE/StbE-replicon-stabilization-toxin
MDYSIKISKSVQKQIDDLPNPIKSRILEKIKDLSIEPRPSGVVKLKNSDYEYRLRVGDYRVRYEIDDPKQAILILQCKHRRDVYR
>CP012375.1|AOC51780.1|1047216_1047390_+|tetratricopeptide-protein
MFLAEIAHKTNRPELALSYCQQALELCQELGITLVKDCEELSGQIQGNLGDSDNNLK
>CP012375.1|AOC51781.1|1047833_1048172_+|fdxN-element-excision-controlling-factor-protein
MASLIAQYRQIIEKTFQDYADFLDTDHQIQIELVLDQTRDRYLLVETGWQNGYRIYGTLLHIDIIDQKIWIQHDGTEDGIADELVAAGIPQNQIILAFKSPEIRPYTGFAVA

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Crispr_ID: CP012375_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP012375_5

1231116-1231531

Orphan

Consensus_repeat	Method
GTTTCCAACTAATCCTATTTGACCTAATAGGTAAGG	PILER-CR
GTTTCCAACTAATCCTATTTGACCTAATAGGTAAGG	CRISPRCasFinder
GTTTCCAACTAATCCTATTTGACCTAATAGGTAAGG	CRT

5 spacers

The CRISPR arrays of CP012375_5

>merge|CP012375|5|1231116-1231531|PILER-CR,CRISPRCasFinder,CRT
GTTTCCAACTAATCCTATTTGACCTAATAGGTAAGGAGTAAGAGTAGGGCTAATTCATGAATTAGCCCTACTTTTTTAGTTTCCAACTAATCCTATTTGACCTAATAGGTAAGGTTCACTGGCTCACCACCATGCCAAGGATTCTCAATAGTGTTTCCAACTAATCCTATTTGACCTAATAGGTAAGGTCCTTGCCATTATTAGCCCTGCTCGGGCCCAAGAACTCAAGTTTCCAACTAATCCTATTTGACCTAATAGGTAAGGCAGAGCCGTAAAATCGACGGGCAGAAAATGAATTCTACTGTTTCCAACTAATCCGATTTGACCTAATAGGTAAGGTTAGTCTGATTTTTTAATCAGTGTAGAAAAGCCCCCCTCAAGTTTCCAACTAATCCTATTTGACCTAATAGGTAAGG

>CP012375|5|1|1231116-1231531|PILER-CR
GTTTCCAACTAATCCTATTTGACCTAATAGGTAAGG	AGTAAGAGTAGGGCTAATTCATGAATTAGCCCTACTTTTTTA
GTTTCCAACTAATCCTATTTGACCTAATAGGTAAGG	TTCACTGGCTCACCACCATGCCAAGGATTCTCAATAGT
GTTTCCAACTAATCCTATTTGACCTAATAGGTAAGG	TCCTTGCCATTATTAGCCCTGCTCGGGCCCAAGAACTCAA
GTTTCCAACTAATCCTATTTGACCTAATAGGTAAGG	CAGAGCCGTAAAATCGACGGGCAGAAAATGAATTCTACT
GTTTCCAACTAATCCGATTTGACCTAATAGGTAAGG	TTAGTCTGATTTTTTAATCAGTGTAGAAAAGCCCCCCTCAA
GTTTCCAACTAATCCTATTTGACCTAATAGGTAAGG

>CP012375|5|5|1231116-1231531|CRISPRCasFinder
GTTTCCAACTAATCCTATTTGACCTAATAGGTAAGG	AGTAAGAGTAGGGCTAATTCATGAATTAGCCCTACTTTTTTA
GTTTCCAACTAATCCTATTTGACCTAATAGGTAAGG	TTCACTGGCTCACCACCATGCCAAGGATTCTCAATAGT
GTTTCCAACTAATCCTATTTGACCTAATAGGTAAGG	TCCTTGCCATTATTAGCCCTGCTCGGGCCCAAGAACTCAA
GTTTCCAACTAATCCTATTTGACCTAATAGGTAAGG	CAGAGCCGTAAAATCGACGGGCAGAAAATGAATTCTACT
GTTTCCAACTAATCCGATTTGACCTAATAGGTAAGG	TTAGTCTGATTTTTTAATCAGTGTAGAAAAGCCCCCCTCAA
GTTTCCAACTAATCCTATTTGACCTAATAGGTAAGG

>CP012375|5|1|1231116-1231531|CRT
GTTTCCAACTAATCCTATTTGACCTAATAGGTAAGG	AGTAAGAGTAGGGCTAATTCATGAATTAGCCCTACTTTTTTA
GTTTCCAACTAATCCTATTTGACCTAATAGGTAAGG	TTCACTGGCTCACCACCATGCCAAGGATTCTCAATAGT
GTTTCCAACTAATCCTATTTGACCTAATAGGTAAGG	TCCTTGCCATTATTAGCCCTGCTCGGGCCCAAGAACTCAA
GTTTCCAACTAATCCTATTTGACCTAATAGGTAAGG	CAGAGCCGTAAAATCGACGGGCAGAAAATGAATTCTACT
GTTTCCAACTAATCCGATTTGACCTAATAGGTAAGG	TTAGTCTGATTTTTTAATCAGTGTAGAAAAGCCCCCCTCAA
GTTTCCAACTAATCCTATTTGACCTAATAGGTAAGG

Protein	Signature genes	Signature genes Name	Protein_function
CP012375.1\|AOC51953.1\|1226399_1227017_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379173
CP012375.1\|AOC51949.1\|1223326_1224265_+\|DnaJ-class-molecular-chaperone	unknown	unknown	gnl\|CDD\|197617
CP012375.1\|AOC51960.1\|1232715_1232931_+\|hypothetical-protein	unknown	unknown	unknown
CP012375.1\|AOC51956.1\|1228512_1229178_+\|Urease-accessory-protein-UreF	unknown	unknown	gnl\|CDD\|223900
CP012375.1\|AOC51965.1\|1236613_1237357_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|315619
CP012375.1\|AOC51958.1\|1230361_1230952_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236703
CP012375.1\|AOC51967.1\|1238440_1239244_-\|Putative-amidotransferase-similar-to-cobyric-acid-synthase	unknown	unknown	gnl\|CDD\|225974
CP012375.1\|AOC51969.1\|1240908_1242099_+\|2-alkenal-reductase	unknown	unknown	gnl\|CDD\|273938
CP012375.1\|AOC51964.1\|1235428_1236226_+\|cAMP-binding-protein	unknown	unknown	gnl\|CDD\|223736
CP012375.1\|AOC51955.1\|1227766_1228327_-\|hypothetical-protein	unknown	unknown	unknown
CP012375.1\|AOC51957.1\|1229405_1230356_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|133005
CP012375.1\|AOC51951.1\|1225606_1226119_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378226
CP012375.1\|AOC51961.1\|1233132_1234569_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|206646
CP012375.1\|AOC51963.1\|1234990_1235179_-\|Prevent-host-death-protein,-Phd-antitoxin	unknown	unknown	unknown
CP012375.1\|AOC51962.1\|1234709_1235006_-\|Death-on-curing-protein,-Doc-toxin	unknown	unknown	gnl\|CDD\|368240
CP012375.1\|AOC51968.1\|1239407_1240745_-\|putative-amino-acid-ligase-found-clustered-with-an-amidotransferase	unknown	unknown	gnl\|CDD\|223840
CP012375.1\|AOC51950.1\|1224303_1225521_+\|ATP-phosphoribosyltransferase-regulatory-subunit	unknown	unknown	gnl\|CDD\|237043
CP012375.1\|AOC51966.1\|1237443_1238364_-\|hypothetical-protein	unknown	unknown	unknown
CP012375.1\|AOC51954.1\|1227261_1227765_+\|Molybdenum-cofactor-biosynthesis-protein-MoaB	unknown	unknown	gnl\|CDD\|238451
CP012375.1\|AOC51952.1\|1226166_1226403_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379201

Protein	Function_ID	Function_description	E-value
CP012375.1\|AOC51953.1\|1226399_1227017_-\|hypothetical-protein	gnl\|CDD\|379173	pfam13413, HTH_25, Helix-turn-helix domain. This domain is a helix-turn-helix domain that probably binds to DNA.	1.57976e-22
CP012375.1\|AOC51949.1\|1223326_1224265_+\|DnaJ-class-molecular-chaperone	gnl\|CDD\|197617	smart00271, DnaJ, DnaJ molecular chaperone homology domain.	4.92987e-10
CP012375.1\|AOC51956.1\|1228512_1229178_+\|Urease-accessory-protein-UreF	gnl\|CDD\|223900	COG0830, UreF, Urease accessory protein UreF [Posttranslational modification, protein turnover, chaperones].	4.31806e-71
CP012375.1\|AOC51965.1\|1236613_1237357_+\|hypothetical-protein	gnl\|CDD\|315619	pfam12973, Cupin_7, ChrR Cupin-like domain. Members of this family are part of the cupin superfamily. This family includes the transcriptional activator ChrR.	9.4839e-39
CP012375.1\|AOC51958.1\|1230361_1230952_+\|hypothetical-protein	gnl\|CDD\|236703	PRK10502, PRK10502, putative acyl transferase; Provisional.	7.01182e-113
CP012375.1\|AOC51967.1\|1238440_1239244_-\|Putative-amidotransferase-similar-to-cobyric-acid-synthase	gnl\|CDD\|225974	COG3442, COG3442, Predicted glutamine amidotransferase [General function prediction only].	1.6359e-121
CP012375.1\|AOC51969.1\|1240908_1242099_+\|2-alkenal-reductase	gnl\|CDD\|273938	TIGR02037, Probable_periplasmic_serine_protease_do/HhoA-like, periplasmic serine protease, Do/DeqQ family. This family consists of a set proteins various designated DegP, heat shock protein HtrA, and protease DO. The ortholog in Pseudomonas aeruginosa is designated MucD and is found in an operon that controls mucoid phenotype. This family also includes the DegQ (HhoA) paralog in E. coli which can rescue a DegP mutant, but not the smaller DegS paralog, which cannot. Members of this family are located in the periplasm and have separable functions as both protease and chaperone. Members have a trypsin domain and two copies of a PDZ domain. This protein protects bacteria from thermal and other stresses and may be important for the survival of bacterial pathogens.// The chaperone function is dominant at low temperatures, whereas the proteolytic activity is turned on at elevated temperatures. [Protein fate, Protein folding and stabilization, Protein fate, Degradation of proteins, peptides, and glycopeptides].	1.88636e-112
CP012375.1\|AOC51964.1\|1235428_1236226_+\|cAMP-binding-protein	gnl\|CDD\|223736	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms].	7.25704e-26
CP012375.1\|AOC51957.1\|1229405_1230356_+\|hypothetical-protein	gnl\|CDD\|133005	cd02511, Beta4Glucosyltransferase, UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide. UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.	2.38914e-79
CP012375.1\|AOC51951.1\|1225606_1226119_+\|hypothetical-protein	gnl\|CDD\|378226	pfam09626, DHC, Dihaem cytochrome c. Dihaem cytochrome c (DHC) is a soluble c-type cytochrome that folds into two distinct domains, each binding a single haem group and connected by a small linker region. Despite little sequence similarity, the N-terminal domain (residues 12-75) is a class I type cytochrome c, that binds one of the haems, but the domain surrounding the other haem is structurally unique. DHC binds electrostatically to an oxygen-binding protein, sphaeroides haem protein (SHP), as a component of a conserved electron transfer pathway. DHC acts as the physiological electron donor for SHP during phototrophic growth. In certain species DHC is found upstream of pfam01292.	9.64707e-28
CP012375.1\|AOC51961.1\|1233132_1234569_+\|hypothetical-protein	gnl\|CDD\|206646	cd00880, Era_like, E. coli Ras-like protein (Era)-like GTPase. The Era (E. coli Ras-like protein)-like family includes several distinct subfamilies (TrmE/ThdF, FeoB, YihA (EngB), Era, and EngA/YfgK) that generally show sequence conservation in the region between the Walker A and B motifs (G1 and G3 box motifs), to the exclusion of other GTPases. TrmE is ubiquitous in bacteria and is a widespread mitochondrial protein in eukaryotes, but is absent from archaea. The yeast member of TrmE family, MSS1, is involved in mitochondrial translation; bacterial members are often present in translation-related operons. FeoB represents an unusual adaptation of GTPases for high-affinity iron (II) transport. YihA (EngB) family of GTPases is typified by the E. coli YihA, which is an essential protein involved in cell division control. Era is characterized by a distinct derivative of the KH domain (the pseudo-KH domain) which is located C-terminal to the GTPase domain. EngA and its orthologs are composed of two GTPase domains and, since the sequences of the two domains are more similar to each other than to other GTPases, it is likely that an ancient gene duplication, rather than a fusion of evolutionarily distinct GTPases, gave rise to this family.	1.59e-39
CP012375.1\|AOC51962.1\|1234709_1235006_-\|Death-on-curing-protein,-Doc-toxin	gnl\|CDD\|368240	pfam05016, ParE_toxin, ParE toxin of type II toxin-antitoxin system, parDE. ParE is the toxin family of a type II toxin-antitoxin family. It is toxic towards DNA gyrase, but is neutralized by the antitoxin ParD. The family also encompasses RelE/ParE described in.	2.15415e-07
CP012375.1\|AOC51968.1\|1239407_1240745_-\|putative-amino-acid-ligase-found-clustered-with-an-amidotransferase	gnl\|CDD\|223840	COG0769, MurE, UDP-N-acetylmuramyl tripeptide synthase [Cell envelope biogenesis, outer membrane].	2.22533e-90
CP012375.1\|AOC51950.1\|1224303_1225521_+\|ATP-phosphoribosyltransferase-regulatory-subunit	gnl\|CDD\|237043	PRK12292, hisZ, ATP phosphoribosyltransferase regulatory subunit; Provisional.	5.61736e-145
CP012375.1\|AOC51954.1\|1227261_1227765_+\|Molybdenum-cofactor-biosynthesis-protein-MoaB	gnl\|CDD\|238451	cd00886, MogA_MoaB, MogA_MoaB family. Members of this family are involved in biosynthesis of the molybdenum cofactor (MoCF) an essential cofactor of a diverse group of redox enzymes. MoCF biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea, and eukaryotes. MoCF contains a tricyclic pyranopterin, termed molybdopterin (MPT). MogA, together with MoeA, is responsible for the metal incorporation into MPT, the third step in MoCF biosynthesis. The plant homolog Cnx1 is a MoeA-MogA fusion protein. The mammalian homolog gephyrin is a MogA-MoeA fusion protein, that plays a critical role in postsynaptic anchoring of inhibitory glycine receptors and major GABAa receptor subtypes. In contrast, MoaB shows high similarity to MogA, but little is known about its physiological role. All well studied members of this family form highly stable trimers.	3.79351e-63
CP012375.1\|AOC51952.1\|1226166_1226403_-\|hypothetical-protein	gnl\|CDD\|379201	pfam13464, DUF4115, Domain of unknown function (DUF4115). This short domain is often found at the C-terminus of proteins containing a helix-turn-helix domain. The function of this domain is unknown.	1.15538e-16

>CP012375.1|AOC51958.1|1230361_1230952_+|hypothetical-protein
MSPEIRTDEEAWLDLRTYDQSWFDRGRSHPIILLWWLVQGILFPLSLHQMDSFRCAILRLFGAKIGLGVKIRPTVRVTYPWKVAIGDYSWIGDDVVIYSLDNVTIGSHCVISQKCYLCTGSHDPGDRSFGLKTTPILIGNGTWIAADCFLAPGVKIGSNVVIGARSSVFADIPAQKVAWGSPCRPQYDRKMNSYSS
>CP012375.1|AOC51957.1|1229405_1230356_+|hypothetical-protein
MFSQSEKIPVSVLIPAKNEESNLPACLESVARADEVFVVDSQSSDRSIEISTNYGANVVQFHFNGRWPKKKNWSLDNLPFRNEWVLIVDCDERITPELWDEIATVIQDPNYNGYYLNRRVFFLGQWIRYGGKYPDWNLRLFKHKSGRYENLNTEDIPNTGDNEVHEHVILDGKVGYLKNDMLHIDFRDIYHWLERHNRYSNWEARVYYNILTGNDESGTIGANLFGDAVQRKRFLKKIWVKLPFKPLLRFILFYVIRFGFLDGKAGYIYGRLLSQYEYQIGVKLYELRQFGGKLNVNTHVNPSVKPSEPQPVEMIK
>CP012375.1|AOC51956.1|1228512_1229178_+|Urease-accessory-protein-UreF
MLDQKELLCLLQLASPILPVGAYSYSEGLETLVEKGIISNSASLNDWLERSLCQGSIRLETAVLLRVYRCFCQEDFTKLNYWDNWLSATRETAELRQQSWQMGRSLLNLLRELAPVRDNLPEQANYATAFAIGASHWQIGEELAVLGYLHSWASNLINAGLRLIPLGQTLGQSLLIGLQPSLLTATADIISLADENLSSWSWGLSFASMNHETQYSRLFRS
>CP012375.1|AOC51955.1|1227766_1228327_-|hypothetical-protein
MVLALIAGVDRAELPSSLLFYPPATPPTPIAGLLTHSFQFLCCLPPIVCLFSYALLSQEASFSNSRHFLLFSGIITGLFAINEIFRIHIILLYFNIPKFLTISVYGLAILIYGLVFWRHIRQTSYQILIIALALLTFAITIDLLQIKNRGFASLSEGIPKLLSAVNLASYFWDVCFQEISAKIKSQ
>CP012375.1|AOC51954.1|1227261_1227765_+|Molybdenum-cofactor-biosynthesis-protein-MoaB
MTFIPHPDTAPLHLSCAVVTVSDTRTPETDRSGQIIQELLTRSGHDIGLYLIIPDEPLQIQAILSEISNQNRIKVLILNGGTGIAPRDTTYDALVPLLRITLPGFGELFRYLSYQEIGSRAMASRAIAGVYQNLLVFSLPGSTNAVKLALEKLILPEISHLVKQMNG
>CP012375.1|AOC51953.1|1226399_1227017_-|hypothetical-protein
MSQLSPLQAEQIKEIGTYLRQKREESCLSMDDIAALTMIRVPMLEALETGNWEKLPELIYVKGFIKRYGDALKIDGKALADRLSPSAEQLAQEVTIPKTLPTKVVPIPKAEPAAPKAERVEPEKPAPETSPQPAKSGVFGMYLWLGLLAGIFCGIGYLFLRPPLSNPPAVTPSPSPLVSPAPVVPPAVVASPSPSPRQKFPSQPK
>CP012375.1|AOC51952.1|1226166_1226403_-|hypothetical-protein
MTIEQAAWVRVIADGKKVYEGSLQPGAKQTWTAQKSLNIRSGNAGGVKISLNEKPAQLMGKAGQIGEITLTAPPLSDQ
>CP012375.1|AOC51951.1|1225606_1226119_+|hypothetical-protein
MPSIGQVKSIFFMLLFLLSILGGILLASLLQQPAIAQSPASDIVLNRYQIGQQTYLENCASCHIAIPPSILPSQTWKKILENPDSHYGIRLKPIVGITQRLIWDYLSYSSRPLRETTFVPLLIEQSSYVKVLHPRVNLPTPLGHTTCVSCHPNASRYDYQTLTPIWDNAA
>CP012375.1|AOC51950.1|1224303_1225521_+|ATP-phosphoribosyltransferase-regulatory-subunit
MIHQPPAGTRDLLPLEVTQKGWINDRLQSVFQRWGYQRIVTSTIEWLDTLTAGGTIDPSTVIQLHGDSQGLSGLRPELTASIARSAVTRMSGESYPQRLCYRANVFRRPSASYHGRQVEFYQAGVELLFSGGLLADAEILLLLADCFDSLAVPNWQIILGEAGLTRSLLSPFPDPLREQVKRCLALLDYVSLENLPYPNETLRQQARQLFHLRGNPEDVLARVAVLAQEESAQKAVNNLKSLVELLNADRSEPFPLILDLSLIQTFDYYTGIVFKAVSDHQQNLSILGQGGRYDQLLGVFHPQGQSAPGIGFSLNIEELHESLLSGQTLPSQAPPLDWLLIPLGNNAQIATFSKARSLRNADPNLRVAIDLGGRSEAQIRTYARDRMIKNLAWVQEDGSVIEESL
>CP012375.1|AOC51949.1|1223326_1224265_+|DnaJ-class-molecular-chaperone
MTFPISQGLFQYDLIDHFAILGVSIDAEQEEIRERYLKIAYKLHPDTCRTHTPDEKKLANQLLSKLVNPAYEHLGHDLSREEFRLVLGQMGKAMGKDLSKITISSEPARKLAQSSANYELAYQKILQSLAIDQYTALENTYQKIGQLSELNLVYLILTEGRGNKKTSPKVFISQSNTNQSELVRPAFTTAVQTKSKESPLEAYIRRAQASLDQNNPAQALRELRDALRQEPDNGICHALLGLAYLRQNQLSMARVHINRAWKASPQDATVIRCKRELDKAVNSNIEMQDQKEQKDEGERKGGFWSRFGGKKK
>CP012375.1|AOC51960.1|1232715_1232931_+|hypothetical-protein
MNEWLKENAKVPEGEWVSGEGKALKNTVLNYDDSQQVFFNFVSLSPEKGTFPHQHFLVKDMGFNLVQVRGL
>CP012375.1|AOC51961.1|1233132_1234569_+|hypothetical-protein
MTSDPSLDRAWNTEDLEQALRGVGTIQEELNYNQARNSLSKLVERLDLTSIEKIGLEAEIDRLVALLEKLDRSLIQIAAFGLVGRGKSSILNALVGQEIFTTGPLHGVTRTIEGVNWQLSSDDTFPNLARLTLNGQGNAQVQLLDTPGIDEVDGQTREILACQVAQQVDLILFIISGDMTKVEFSALAKLREAGKPMILVFNKIDQYPEVDRLAIYEKIASERVKELLSPDEIVMVAASPLLTETVKAQDGRLKTQRFRGKPQIEALKLKILEILEREGKSLVALNSMLYADEVNEQIVARKMAIRDRGANQLIQKAVMIKASAIALNPVTVLDLFTGAVIDLAMILALSRLYGIDLTRQGAIALLQKIALNMGGISASEFLAVLGLSSLKGLLGLSIPATGGISLLPYTSIALTQAGVAGVSCYAIGQVTKTYLANGATWGPDGPKAVVASILDSLDETSILNRIKRELGSKLGGGG
>CP012375.1|AOC51962.1|1234709_1235006_-|Death-on-curing-protein,-Doc-toxin
MADRVNYRLVWSPKAIEDVDAIASYISRDSPSYAAAVVRRILDISYSLENCPLEAKKCAEFSDDTIREKSAYAYRLIYQIQGSVVIIAAIVHSKHFLD
>CP012375.1|AOC51963.1|1234990_1235179_-|Prevent-host-death-protein,-Phd-antitoxin
MNSIRQKVESLLNQLPDDCSIEDIQYHLYVLEKVRQSLNAASLENTIPQEEVEGLLNKWLIE
>CP012375.1|AOC51964.1|1235428_1236226_+|cAMP-binding-protein
MTDNHLAATSPPPIAENFCYISLQFPQRPSGLLILMSSSVPSSDFIPLIGQETEIFNWAKSHYRNHTFAKDERVATRPGLLYFVESGAIRILGKAQVNVIDQKSCRQLPMADSEEVFLGFVGAGQPFEIVSQFPFQLQAQAHLDGTELVWLYWEDLEQWPQLRSAVMETFRHQYQRKLFWLSILGQKRSLDRLMGFLVLLLEEYGQPCLEGYYLPYTLTHAQIASAIGTTRVTVTRLIGKLRQQNSIFFKQDNLIGLPSLFLSQN
>CP012375.1|AOC51965.1|1236613_1237357_+|hypothetical-protein
MTAQSLWKPQKVHVNLLSRVSVLPTSLTWFQTNFTGIWFGCFESDHEIQDHPVTMLTRFYPGGFFPLHGHPGGEEILVLEGNFADETGVHPPGTYMLNPEGFIHRPYSEEGCLTFVKLRQHGGKTRQQVRTNIFNGSWQAGIVPEIKVQHLYEQADFSEKVWIERWLPNTQLVNVVETEIKEIFVIEGTWRDELGSYPVGSWLRYPPNCPYSPSSTTGCLIYVKTYPVTDTTARFVVGDDFQHPQAI
>CP012375.1|AOC51966.1|1237443_1238364_-|hypothetical-protein
MTGKIIDRQTAGFLVLIIPLAVLIILVFTAWPLILLVFFLTLAVKVWQDYRWSKLSTVINPYFNQLLQDNQGCLTPIDLSAKANLTAKLARQFLDKKAEEFGAQKKAVGDKGMAYYFITASTLGSIFDESDPSLEEIEEKQVPAITASRSPLTNLEQSQEAKSPLIVAEKSENSVPEVAVISSSQPLTNLGKLFEEKEEENTAAISVQETVIQEPEEIINPSLNSSASSLFQSEAEVREESLTTVSETISSMSLADLAKRLGVTPAVLGRNKKNKSEAEFADWSRIRDPDGIAWKFDAKNSLFVAN
>CP012375.1|AOC51967.1|1238440_1239244_-|Putative-amidotransferase-similar-to-cobyric-acid-synthase
MQELELKIGWLYPTLMSTYGDRGNVITIQRRCQWRDIPVTIIPLDAQTEADTFYQVDIIVGGGAQDRQQEIVMRDLQGKKAAAMKEQLSAGIPGVFTCGSPQLLGHYYEPAFGQRIEGLGLLDLVSKHPGPNAKRCIGNVVFEITASPLAEEIKAMTGEKPLVIGFENHGGRTYLQTVSPLGKVITGYGNNGEDGYEGAFYHNAIATYAHGPLLPKNPFLADWLIQKALEQKYQKPIFLTKLDDSLALKARFAMFERLELTSVTNKA
>CP012375.1|AOC51968.1|1239407_1240745_-|putative-amino-acid-ligase-found-clustered-with-an-amidotransferase
MQLFDRIRLGIAVAVAKTVTAVVKGLRLGAASVLPGEIARRLHPRLLPLLCGQVRRGVILVVGTNGKTTTSLLLRTILERQGAKVTHNTTGANLINGLITALLADANLFGTLKADYAILEVDENILPLVLKDCRPRAILALNLFRDQLDRYGEVDTISRRWQGAISPLPTDTLVILNADDPTLSHLGQQLPQRVVYFGLSEPELYLEEIPHAVDSIYCPKCGASLDYRGVYLSHLGDFSCPSCGFKKSNPAFHSHDWPQILIGVYNKYNTLAAGLVAQELGIKDREIFETVQGFKAAFGRAEELEIEGKKVRILLSKNPVGMNETIRAVADILQKEKSSTTLLVLNDRIPDGTDVSWIWDVDTEKLTRLGTTLVVTGDRLYDMALRLQYSQDSLAYPVNLIVESDLKKAIQIALNNTKNEETLHILPTYSAMLEVREILTGRKIL
>CP012375.1|AOC51969.1|1240908_1242099_+|2-alkenal-reductase
MGLLTRLGISLGLLALGGAVGVLGNQYLSRKAPLEVNTPPAIVPASLSLPVIPQNDDNVNFIAQAVQKVGPAVVRIDSAREVADQIPEEFKQPFFRRFFGDQVPIPKEHWERGTGSGFIISTEGLLLTNAHVVDGTTQVKVTLKNGQTYQGKVLGVDNMTDVALVKIEAKNLPTVTFGKAETLTPGEWAIAIGNPLGLDNTVTVGIISALGRTSSEVGVPDKRVRFIQTDAAINPGNSGGPLLNAKGEVIGINTAIRADAQGLGFAIPIETAQKVAGQLSSKGKAEHPYIGIQMVTLTPELRQQLNETKELNFNIDQNEGVIVLRVVENSPAQKAGMQAGDIIETVAGNPVKTASDVQQGVETSAIGGNLEIEINRRGKQQTLTVQPGVFPSKTSE

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Crispr_ID: CP012375_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP012375_6

1498096-1498215

Orphan

Consensus_repeat	Method
CTGATTCGGAGCATCTTTCAATTTGACAACGCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP012375_6

>merge|CP012375|6|1498096-1498215|CRISPRCasFinder
CTGATTCGGAGCATCTTTCAATTTGACAACGCCTATTGTAGGGCTAATTCATGAATTAGCCCTACACCTAGTAATTTCAGTTCCCATCTGATTAGGAGCATCTTTCAATTTGACAACGCC

>CP012375|6|6|1498096-1498215|CRISPRCasFinder
CTGATTCGGAGCATCTTTCAATTTGACAACGCC	TATTGTAGGGCTAATTCATGAATTAGCCCTACACCTAGTAATTTCAGTTCCCAT
CTGATTAGGAGCATCTTTCAATTTGACAACGCC

Protein	Signature genes	Signature genes Name	Protein_function
CP012375.1\|AOC52204.1\|1496181_1497864_+\|hypothetical-protein	unknown	unknown	unknown
CP012375.1\|AOC52203.1\|1493993_1495982_-\|Protoporphyrin-IX-Mg-chelatase-subunit-D	unknown	unknown	gnl\|CDD\|274135
CP012375.1\|AOC52195.1\|1490130_1490748_+\|Serine-acetyltransferase	unknown	unknown	gnl\|CDD\|223975
CP012375.1\|AOC52198.1\|1491569_1491962_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|370157
CP012375.1\|AOC52202.1\|1493800_1493986_+\|hypothetical-protein	unknown	unknown	unknown
CP012375.1\|AOC52206.1\|1499776_1500310_+\|General-secretion-pathway-protein-G	unknown	unknown	gnl\|CDD\|130771
CP012375.1\|AOC52210.1\|1503531_1503843_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|366774
CP012375.1\|AOC52200.1\|1492332_1493223_-\|hypothetical-protein	unknown	unknown	unknown
CP012375.1\|AOC52213.1\|1505672_1505885_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|371332
CP012375.1\|AOC52207.1\|1501085_1501619_+\|General-secretion-pathway-protein-G	unknown	unknown	gnl\|CDD\|130771
CP012375.1\|AOC52212.1\|1504441_1505377_+\|Ribosome-associated-endonuclease,-involved-in-final-steps-of-23S-rRNA-maturation	unknown	unknown	gnl\|CDD\|215029
CP012375.1\|AOC52211.1\|1504234_1504369_-\|hypothetical-protein	unknown	unknown	unknown
CP012375.1\|AOC52197.1\|1491367_1491490_+\|hypothetical-protein	unknown	unknown	unknown
CP012375.1\|AOC52214.1\|1506038_1507274_+\|L,L-diaminopimelate-aminotransferase	unknown	unknown	gnl\|CDD\|181053
CP012375.1\|AOC52199.1\|1492128_1492260_+\|hypothetical-protein	unknown	unknown	unknown
CP012375.1\|AOC52201.1\|1493233_1493710_-\|hypothetical-protein	unknown	unknown	unknown
CP012375.1\|AOC52205.1\|1498221_1499505_-\|TldE-protein,-part-of-TldE/TldD-proteolytic-complex	unknown	unknown	gnl\|CDD\|223389
CP012375.1\|AOC52208.1\|1501813_1502467_+\|Type-IV-pilin-PilA	unknown	unknown	gnl\|CDD\|374761
CP012375.1\|AOC52209.1\|1502672_1503383_+\|hypothetical-protein	unknown	unknown	unknown
CP012375.1\|AOC52196.1\|1490742_1491384_-\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670

Protein	Function_ID	Function_description	E-value
CP012375.1\|AOC52203.1\|1493993_1495982_-\|Protoporphyrin-IX-Mg-chelatase-subunit-D	gnl\|CDD\|274135	TIGR02442, Uncharacterized_protein_Rv2850c/MT2916, cobaltochelatase subunit. Cobaltochelatase is responsible for the insertion of cobalt into the corrin ring of coenzyme B12 during its biosynthesis. Two versions have been well described. CbiK/CbiX is a monomeric, anaerobic version which acts early in the biosynthesis (pfam06180). CobNST is a trimeric, ATP-dependent, aerobic version which acts late in the biosynthesis (TIGR02257/TIGR01650/TIGR01651). A number of genomes (actinobacteria, cyanobacteria, betaproteobacteria and pseudomonads) which apparently biosynthesize B12, encode a cobN gene but are demonstrably lacking cobS and cobT. These genomes do, however contain a homolog (modelled here) of the magnesium chelatase subunits BchI/BchD family. Aside from the cyanobacteria (which have a separate magnesium chelatase trimer), these species do not make chlorins, so do not have any use for a magnesium chelatase. Furthermore, in nearly all cases the members of this family are proximal to either CobN itself or other genes involved in cobalt transport or B12 biosynthesis.	0
CP012375.1\|AOC52195.1\|1490130_1490748_+\|Serine-acetyltransferase	gnl\|CDD\|223975	COG1045, CysE, Serine acetyltransferase [Amino acid transport and metabolism].	9.82855e-46
CP012375.1\|AOC52198.1\|1491569_1491962_-\|hypothetical-protein	gnl\|CDD\|370157	pfam08854, DUF1824, Domain of unknown function (DUF1824). This uncharacterized family of proteins are principally found in cyanobacteria.	4.94391e-63
CP012375.1\|AOC52206.1\|1499776_1500310_+\|General-secretion-pathway-protein-G	gnl\|CDD\|130771	TIGR01710, Type_II_secretion_system_protein_G, type II secretion system protein G. This model represents GspG, protein G of the main terminal branch of the general secretion pathway, also called type II secretion. It transports folded proteins across the bacterial outer membrane and is widely distributed in Gram-negative pathogens. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis].	1.23577e-14
CP012375.1\|AOC52213.1\|1505672_1505885_-\|hypothetical-protein	gnl\|CDD\|371332	pfam10999, DUF2839, Protein of unknown function (DUF2839). This bacterial family of unknown function appear to be restricted to Cyanobacteria.	3.29987e-35
CP012375.1\|AOC52207.1\|1501085_1501619_+\|General-secretion-pathway-protein-G	gnl\|CDD\|130771	TIGR01710, Type_II_secretion_system_protein_G, type II secretion system protein G. This model represents GspG, protein G of the main terminal branch of the general secretion pathway, also called type II secretion. It transports folded proteins across the bacterial outer membrane and is widely distributed in Gram-negative pathogens. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis].	8.06764e-15
CP012375.1\|AOC52212.1\|1504441_1505377_+\|Ribosome-associated-endonuclease,-involved-in-final-steps-of-23S-rRNA-maturation	gnl\|CDD\|215029	PLN00016, PLN00016, RNA-binding protein; Provisional.	2.8854e-151
CP012375.1\|AOC52196.1\|1490742_1491384_-\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	1.13552e-107
CP012375.1\|AOC52205.1\|1498221_1499505_-\|TldE-protein,-part-of-TldE/TldD-proteolytic-complex	gnl\|CDD\|223389	COG0312, TldD, Predicted Zn-dependent proteases and their inactivated homologs [General function prediction only].	2.36795e-91
CP012375.1\|AOC52208.1\|1501813_1502467_+\|Type-IV-pilin-PilA	gnl\|CDD\|374761	pfam16734, Pilin_GH, Type IV pilin-like G and H, putative. Pilin_GH is a family from Cyanobacteria. All the proteins are putatively annotated as being general secretion pathway proteins G and H, and are likely to be pilins of the type IV secretory pathway.	1.01769e-14
CP012375.1\|AOC52214.1\|1506038_1507274_+\|L,L-diaminopimelate-aminotransferase	gnl\|CDD\|181053	PRK07590, PRK07590, L,L-diaminopimelate aminotransferase; Validated.	0
CP012375.1\|AOC52210.1\|1503531_1503843_-\|hypothetical-protein	gnl\|CDD\|366774	pfam01724, DUF29, Domain of unknown function DUF29. This family consists of various hypothetical proteins from cyanobacteria, none of which are functionally described. The aligned region is approximately 120-140 amino acids long corresponding to almost the entire length of the proteins in the family. Structure 3fcn is a small protein that has a novel all-alpha fold. The N-terminal helical hairpin is likely to function as a dimerization module. This protein is a member of PFam family PF01724. The function of this protein is unknown. One protein sequence contains a fusion of this protein and a DnaB domain, suggesting a possible role in DNA helicase activity (hypothetical). Dali hits have low Z and high rmsd, suggesting probably only topological similarities (not functional relevance) (details derived from TOPSAN). The family has several highly conserved sequence motifs, including YD/ExD, DxxNVxEEIE, and CPY/F/W, as well as conserved tryptophans.	2.70025e-37

>CP012375.1|AOC52204.1|1496181_1497864_+|hypothetical-protein
MITTIIDRLTETNPQIMREWQGRLTPKNISIASVISLVGQLLVYLYYQNLLPVGAGFNRYCTANPPHNNDYDPYSGLKYCIQDLNGQWMIISRLWWLDVFTFLSITGIFALLVVGTYQLIADLSGEECRGTLNFIRLSPQPAKTIFIGKIFGVPILLYLVCLLALPFHLGAGLLAGIPLSLILAFYAVLIASCAFFYHAALSFALATPWLGGFQPWLGSAAVLIFVFYSSIITLSGYGGFRTPFDWLILFNPSFFLPYLVKSTFLPPDAVRYLGISQIFDLRWYGQSLWQSVIMGISLILLNFALCTYGLTRIIQRRFHNPLATLVSKPQSYWMMGCFSAISLGFVFQTLEPSYIFDNFAILSVFVAIFGLLILFALTPPRQTLQDWTRYRHLQGKKSISLGKALIFGEKSPSTLAMAVNLAIAILFILPAIFIAPLHQYKLATAAGFLLAMNMILVYAAIAQLLMLAGTNKRALLAATSIGILIIFPFLCFAVLRVDPSQSPLLWFFTFLPIAATKYATLPSFALAIFGQWLGLTLVGWQINRQLNRLGASATKALMPS
>CP012375.1|AOC52203.1|1493993_1495982_-|Protoporphyrin-IX-Mg-chelatase-subunit-D
MTLNFPLTAVVGQEAIKLALLLAAVDPALGGVVIAGRRGTAKSVMARAIHSLLPPIEIIAGNVFNCDPNHPDEWDDRTKEEYSSGEVATEVIRAPFVQIPLGVTEDRLLGSVDVEESVKQGEPVFQPGLLASAHRGILYVDEINLLDDQIANQLLTVLSEGRNQIEREGISFQHPCKPILIATYNPEEGDLRTHLLDRIAIALSADGVLSLDQRVTAVNQAIEYAVSPTAFIAQYAQEIDDLKTEIILAREWLKEVKIKPEQISYLVEEAVRGKVEGHRAEIFAVRVAKAAAALEGRDLVSADDLKRAVELVIVPRSLITPPPPEQEQQPPPPPPPPEPPQDENQQEQEEKEEEKEEEKEPEQPDNLPEEFVFDPEGVLLDPSVLYFAQMAQRQGKSGARNLIFSEDRGRYIKPMLPRGKVKRVAVDATLRAAAPYQKARRLRNPERHVIIEEGDLRSKRLARKAGSLIVFVVDASGSMALNRMQSAKGAVMRLLTEAYENRDQIALIPFRGERADVLLPPTKSITLAKKRLETLPCGGGSPLAHGLTQAVHVGMNARLSGDIGQVVIVAITDGRSNIPLAKSLGEPIPEGEKPDIKAELLDIAAKIRSLGIKLLVIDTEKKFVSTGFAKELALKAGGKYYHLPRATEQAIASMARGAIAGL
>CP012375.1|AOC52202.1|1493800_1493986_+|hypothetical-protein
MLSFSRCCHTGPKKNRKSAKFESITKAGGSPDEKIFTPTDERGFFPYTPHPTPCPQETLFW
>CP012375.1|AOC52201.1|1493233_1493710_-|hypothetical-protein
MSGVLAALLLVTSCAKAPSQFDQAQQESTARGAAAVVKESTSGGSFNQFFPPSGGGYERVYTQEKKGFAEAKLKQDGKVVAMLAISDISNNPAAANKFQDSQTTIKGFPSVKQGTTATAVLVNNRYQVKVLSREPDFTASDRQAWLAKFDLDGLAKLK
>CP012375.1|AOC52200.1|1492332_1493223_-|hypothetical-protein
MSKPIFELVDELPTNNLTVKVLKTLDYVVPGQWDNLVGFKNTIIKVTGETDESMIQQIGDRAVWLFNDKSQGYQRALWLYQTIDSADNALAAASLANAVGGKIPLMGGLIERLTPAPEKAQTIDLTLKLVTELVAFCQINGIPGDSIRDFVASLGDYSGESLMRMAALVCLDGLIPLGGSFIRKVESSLSILRPEELESNSTFASIKELIPGGNTARKLDFIGQSFDSTKGWMSGFVSERSLSQQGLLSKIQGFIDFSADKLVYVGAFLDMTTNYYEHTGIQTLARRLIERAVAEI
>CP012375.1|AOC52199.1|1492128_1492260_+|hypothetical-protein
MGTGKFIGVVRSLDFVRSFHALLFDSQSKHLHPEGKRGAFLVR
>CP012375.1|AOC52198.1|1491569_1491962_-|hypothetical-protein
MEEALKLLKEYGCIQLKIAQSPEEEEALRQAILLVNQGSESINLGICADNNEEGFKALKSYLQALGYPLPNILPEDHPEQRAVYIKYNTQRQASYLDSYTGTYRGVLISCQSENDQLVGTYGHFPLDLFS
>CP012375.1|AOC52197.1|1491367_1491490_+|hypothetical-protein
MRSLPIRLPIPAAGINKYIFFSGKKLRIQWTAVGSFLLVK
>CP012375.1|AOC52196.1|1490742_1491384_-|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MGSDRNKLLLTLHGKPLLAWTLLAAMESRAIIWIGIMAQPEDFEEIREIITAINALKPVQIIQGGETRQKSVYNGLQALPEGAETVLIHDGARCLATPELFDRCAAALATCQGFIAAVPVKDTIKIVDSKGWIEDTPDRSRLWAAQTPQGFQVKLLKECHEQGRKLAWEVTDDAALLEKCGFPVKIVVGEETNLKITTPGDLAIAEYILSQRL
>CP012375.1|AOC52195.1|1490130_1490748_+|Serine-acetyltransferase
MKSFFRKLFFYVGILWLSPLIIAFQVANNRELILGDVRRWVELLGWEKRSDWLQLLALCLEAKEFRNLYYCRLFQGGSFSRFLMYILRFFYRESSYLFLDSSCSIGKGLFIQHGFSTIVMADLGDNCWINQQVTIGYKDKSGRPKIGNNVRITAGAKVLGNITIGDNVTVGANSVVVKDVPPNCVVVGIPARIIKRDGVKVDEKL
>CP012375.1|AOC52205.1|1498221_1499505_-|TldE-protein,-part-of-TldE/TldD-proteolytic-complex
MTIDPQQLIELALKSGAVAAEVYQSSSLSHPVFFEANRLKQLESSESVGTALRLWREGCPGLAVGYGDVEPEILVETALNLSYLNAPEEIEFSAPRRAVYDPIGQDVAVESLIAMGNQMIGHIRQVYPEVICSGEWECEREITRLVNSEGLYCQYTDTALSYYLGIEWVRGEDFLAVYDGEYTRSTPHPETVIKQLLQRLQWAANNVDSPTGKLPILLTSNAVTLLWGTVEMALNGKQILEQSSPWSDKIGQLVMSEKLTLSQQPDREPYSCPFDDEGTPTKFLSLIEGGRVKEFYSDRTTARLLKTTPTGNGFRPGLGVYPMPDLVNLIVAPGEGTLEDLISQIDEGLVIDQILGHGADISGDFSVNIDLGYRIEKGKITGRVKDTMVTGNVYTALQNLIALGADNQWNGSCYTPSLIVDSLSVVR
>CP012375.1|AOC52206.1|1499776_1500310_+|General-secretion-pathway-protein-G
MNSAFKFKLIQALNKKNGNKGFTLIELLVVVIIIGVLAAIALPNLLGQVAKGRQAEARTNLGVVNRAQQVYRLENTTFGTVSQLPVQFTLTYYTSVSNVSNDANGAEAHMAPAANYVNDILEYGSAVSQTTAGVFTAVICEQATPATSTALTAGVLTTAGTASTDAACDATTARPVQ
>CP012375.1|AOC52207.1|1501085_1501619_+|General-secretion-pathway-protein-G
MNSAFKFKLIQALNKKNGNKGFTLIELLVVVIIIGVLAAIALPNLLGQVAKGRQAEARTNLGVVNRAQQVYRLENTTFGTVSQLPVQFTLTYYTSVSNVSNDANGAEAHMAPAANYVNDILEYGSAVSQTTAGVFTAVICEQATPATSAALTAGVLTTAGTASTDAACDATTARRVN
>CP012375.1|AOC52208.1|1501813_1502467_+|Type-IV-pilin-PilA
MPDSFLDSLAYCLKKLIAEIFNAQPEKYRQCCRGITMKYLLFLAIKSQGKKATGFTLVELLVVVIVLGVLTAVGLPNLLQQVAKGRQAEAQAILGQINRAQVAYRLENPTFANLTQLPISGINNARYYSFSDYDVVPTNATRSSYRAQALDPFRNDIKNYAGGVRLINGRFFTLICEAITPLQDSVFVDGSGACSSDSIGFNNDSQGTNQPSQGGPM
>CP012375.1|AOC52209.1|1502672_1503383_+|hypothetical-protein
MAIVEMQQEKVKTLTKEKLLERNYSQESRLENAQVELLKNMPAFGFDNMLANWSMLQFIQYYGDGDARRETGYGLSPDFMEIVTKNDPKFVRAYLMMSVPSSLNAGKPERTVEIMNKGLSKLTPDVTDAYFIWLYKGVDELLFLGDIPAAKKSHQMAADWAKIAGNKFIEKSARGTVKFLETNPDSRAPRVGAWMLVWLNSQNEETRKLARENIEKLGGKLLVFGDNQVMAIPPKD
>CP012375.1|AOC52210.1|1503531_1503843_-|hypothetical-protein
MTLAKVKNLYDQDFALWIEKTVKQLKSGYLSQVDLENLIEEVESLGRRDKRELKNRLITLFEQALKRRYLPLSDCYRGWEVTIKRFQSQLKAILKDSPSLCSF
>CP012375.1|AOC52211.1|1504234_1504369_-|hypothetical-protein
MCHQSSLLGGSTPQTPRWGRKRRPQTPRALAFRWDAYTRLFIHL
>CP012375.1|AOC52212.1|1504441_1505377_+|Ribosome-associated-endonuclease,-involved-in-final-steps-of-23S-rRNA-maturation
MKILIMGGTRFIGVSLTKVLVEQGHEVVLFNRGNKPAPVAGVRQIHGDRTDSAQLKEKLKNESFEAIFDNNGRELSDTQPLVEIFRDRIGHFVYVSSAGVYLKSDQMPHKEGDKLDPKSRHKGKHETENYLSEMGLPWTSIRPVYIYGPGNYNDLEAWFFDRLVRNRPIPIPGHGEHFTQFGHVVDLAKAMAAVLGNSQAIGQVYNISGDRYVTFNGLAKACAAAMGKNAEEIEIVNYNPKKFDFGKKKPFPLRVQHFYADINKATRELNWQPEYDLVSGLTDSFQNDYLASGRDRQEIDLAIDDQILANQ
>CP012375.1|AOC52213.1|1505672_1505885_-|hypothetical-protein
MGESKRRQSALGDKYGQEENILPWLPITKSQASQAYKLTTRGAWIGIGVLAGVWLVIRFVGPAFGWWNVQ
>CP012375.1|AOC52214.1|1506038_1507274_+|L,L-diaminopimelate-aminotransferase
MATINSNYLKLKAGYLFPEIARRVQAFAAANPDANIIRLGIGDVTEPLPLACREAMIKAVQEMGDRSSFKGYGPEQGYAWLREKIAVHDFQARGCDISADEIFISDGSKCDTGNILDIFGDNNSIAVTDPVYPVYVDTNVMAGHTGEVNDRGEYEGLIYLPITAENNFTAQIPAEKVDLIYLCFPNNPTGATATKEHLTAWVNYARANGSIIFFDAAYEAFITDASLPHSIYEIEGARQCAIEFRSFSKNAGFTGTRCALTVVPQSLMAKAADGTDVQLWKLWNRRQSTKFNGVSYIVQRGAEAVYSPEGQAQVEELVKFYLQNATIIREKLTAAGLEVHGGVNAPYVWVKTPQGLSSWDFFDKLLHTCNVVGTPGSGFGAAGEGYFRLSAFNSRANVEAAMERIIDKFQG

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Crispr_ID: CP012375_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP012375_7

1690347-1690463

Orphan

Consensus_repeat	Method
ATCGATCTTTGTGTCCTCTGTGTCTCTGTGGTTCTTTCCACTC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP012375_7

>merge|CP012375|7|1690347-1690463|CRISPRCasFinder
ATCGATCTTTGTGTCCTCTGTGTCTCTGTGGTTCTTTCCACTCACGGTTGCTGGTTCTCCTATTGATAATAGCGATCGATCTTTGTGTCCTCTGTGTCTCTGTGGTTCTTTCCACTC

>CP012375|7|7|1690347-1690463|CRISPRCasFinder
ATCGATCTTTGTGTCCTCTGTGTCTCTGTGGTTCTTTCCACTC	ACGGTTGCTGGTTCTCCTATTGATAATAGCG
ATCGATCTTTGTGTCCTCTGTGTCTCTGTGGTTCTTTCCACTC

Protein	Signature genes	Signature genes Name	Protein_function
CP012375.1\|AOC52412.1\|1687998_1688244_+\|hypothetical-protein	unknown	unknown	unknown
CP012375.1\|AOC52420.1\|1696974_1698459_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|100081
CP012375.1\|AOC52421.1\|1698615_1699248_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|99750
CP012375.1\|AOC52410.1\|1685717_1687754_+\|Type-I-restriction-modification-system,-DNA-methyltransferase-subunit-M	unknown	unknown	gnl\|CDD\|223363
CP012375.1\|AOC52409.1\|1684993_1685368_+\|hypothetical-protein	unknown	unknown	unknown
CP012375.1\|AOC52411.1\|1687756_1687978_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|368559
CP012375.1\|AOC52415.1\|1689003_1690158_+\|Type-I-restriction-modification-system,-specificity-subunit-S	unknown	unknown	gnl\|CDD\|341188
CP012375.1\|AOC52417.1\|1693630_1695067_+\|Signal-recognition-particle,-subunit-Ffh-SRP54	unknown	unknown	gnl\|CDD\|236780
CP012375.1\|AOC52424.1\|1701129_1701291_-\|Iron(III)-transport-ATP-binding-protein-sfuC	unknown	unknown	gnl\|CDD\|213192
CP012375.1\|AOC52413.1\|1688335_1688575_+\|hypothetical-protein	unknown	unknown	unknown
CP012375.1\|AOC52414.1\|1688571_1688979_+\|putative-nucleic-acid-binding-protein,-contains-PIN-domain	unknown	unknown	gnl\|CDD\|129405
CP012375.1\|AOC52418.1\|1695070_1696039_-\|Thiamine-monophosphate-kinase	unknown	unknown	gnl\|CDD\|235583
CP012375.1\|AOC52425.1\|1701524_1702172_-\|Iron(III)-transport-ATP-binding-protein-sfuC	unknown	unknown	gnl\|CDD\|213192
CP012375.1\|AOC52408.1\|1684063_1684951_+\|2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate-hydrolase	unknown	unknown	gnl\|CDD\|223669
CP012375.1\|AOC52422.1\|1699275_1700364_+\|calcium/proton-antiporter,-CaCA-family	unknown	unknown	gnl\|CDD\|273043
CP012375.1\|AOC52407.1\|1683259_1683946_+\|Protein-of-unknown-function-DUF541	unknown	unknown	gnl\|CDD\|225516
CP012375.1\|AOC52406.1\|1681956_1682904_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|316753
CP012375.1\|AOC52419.1\|1696198_1696870_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|293813
CP012375.1\|AOC52423.1\|1700366_1701044_-\|rRNA-small-subunit-7-methylguanosine-(m7G)-methyltransferase-GidB	unknown	unknown	gnl\|CDD\|234637
CP012375.1\|AOC52416.1\|1690549_1693522_+\|Type-I-restriction-modification-system,-restriction-subunit-R	unknown	unknown	gnl\|CDD\|223683

Protein	Function_ID	Function_description	E-value
CP012375.1\|AOC52420.1\|1696974_1698459_+\|hypothetical-protein	gnl\|CDD\|100081	cd06160, S2P-M50_like_2, Uncharacterized homologs of Site-2 protease (S2P), zinc metalloproteases (MEROPS family M50) which cleave transmembrane domains of substrate proteins, regulating intramembrane proteolysis (RIP) of diverse signal transduction mechanisms. Members of the S2P/M50 family of RIP proteases use proteolytic activity within the membrane to transfer information across membranes to integrate gene expression with physiologic stresses occurring in another cellular compartment. In eukaryotic cells they regulate such processes as sterol and lipid metabolism, and endoplasmic reticulum stress responses. In prokaryotes they regulate such processes as sporulation, cell division, stress response, and cell differentiation. This group includes bacterial, eukaryotic, and Archaeal S2P/M50s homologs with additional putative N- and C-terminal transmembrane spanning regions, relative to the core protein, and no PDZ domains.	9.25694e-61
CP012375.1\|AOC52410.1\|1685717_1687754_+\|Type-I-restriction-modification-system,-DNA-methyltransferase-subunit-M	gnl\|CDD\|223363	COG0286, HsdM, Type I restriction-modification system methyltransferase subunit [Defense mechanisms].	2.86209e-74
CP012375.1\|AOC52411.1\|1687756_1687978_+\|hypothetical-protein	gnl\|CDD\|368559	pfam05685, Uma2, Putative restriction endonuclease. This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. A small number of member proteins also contain pfam02861 domains that are involved in protein interactions. Solutions of several structures for members of this family show that it is likely to be acting as an endonuclease.	9.84483e-13
CP012375.1\|AOC52419.1\|1696198_1696870_-\|hypothetical-protein	gnl\|CDD\|293813	cd07727, YmaE-like_MBL-fold, uncharacterized subgroup which includes Bacillus subtilis YmaE and related proteins; MBL-fold metallo hydrolase domain. Includes the uncharacterized Bacillus subtilis YmaE and Nostoc all1228 proteins.Members of this subgroup belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions. The class B metal beta-lactamases (MBLs) from which this fold was named are only a small fraction of the activities which are included in this superfamily. Activities carried out by superfamily members include class B beta-lactamases, hydroxyacylglutathione hydrolases, AHL (acyl homoserine lactone) lactonases, persulfide dioxygenases, flavodiiron proteins, cleavage and polyadenylation specificity factors such as the Int9 and Int11 subunits of Integrator, Sdsa1-like and AtsA-like arylsulfatases, 5'-exonucleases human SNM1A and yeast Pso2p, ribonuclease J and ribonuclease Z, cyclic nucleotide phosphodiesterases, insecticide hydrolases, and proteins required for natural transformation competence. Classical members of the superfamily are di-, or less commonly mono-, zinc-ion-dependent hydrolases, however the diversity of biological roles is reflected in variations in the active site metallo-chemistry. .	5.28374e-19
CP012375.1\|AOC52408.1\|1684063_1684951_+\|2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	2.48905e-31
CP012375.1\|AOC52424.1\|1701129_1701291_-\|Iron(III)-transport-ATP-binding-protein-sfuC	gnl\|CDD\|213192	cd03225, ABC_cobalt_CbiO_domain1, First domain of the ATP-binding cassette component of cobalt transport system. Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.	7.00666e-06
CP012375.1\|AOC52421.1\|1698615_1699248_+\|hypothetical-protein	gnl\|CDD\|99750	cd06259, YdcF-like, YdcF-like. YdcF-like is a large family of mainly bacterial proteins, with a few members found in fungi, plants, and archaea. Escherichia coli YdcF has been shown to bind S-adenosyl-L-methionine (AdoMet), but a biochemical function has not been idenitified. The family also includes Escherichia coli sanA and Salmonella typhimurium sfiX, which are involved in vancomycin resistance; sfiX may also be involved in murein synthesis.	7.65105e-26
CP012375.1\|AOC52414.1\|1688571_1688979_+\|putative-nucleic-acid-binding-protein,-contains-PIN-domain	gnl\|CDD\|129405	TIGR00305, TIGR00305, putative toxin-antitoxin system toxin component, PIN family. This uncharacterized protein family, part of the PIN domain superfamily, is restricted to bacteria and archaea. A comprehensive in silico study of toxin-antitoxin systems by Makarova, et al. (2009) finds evidence this family represents the toxin-like component of one class of type 2 toxin-antitoxin systems. [Cellular processes, Other, Transcription, Degradation of RNA].	2.3737e-20
CP012375.1\|AOC52418.1\|1695070_1696039_-\|Thiamine-monophosphate-kinase	gnl\|CDD\|235583	PRK05731, PRK05731, thiamine monophosphate kinase; Provisional.	8.74679e-132
CP012375.1\|AOC52425.1\|1701524_1702172_-\|Iron(III)-transport-ATP-binding-protein-sfuC	gnl\|CDD\|213192	cd03225, ABC_cobalt_CbiO_domain1, First domain of the ATP-binding cassette component of cobalt transport system. Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.	8.01075e-66
CP012375.1\|AOC52417.1\|1693630_1695067_+\|Signal-recognition-particle,-subunit-Ffh-SRP54	gnl\|CDD\|236780	PRK10867, PRK10867, signal recognition particle protein; Provisional.	0
CP012375.1\|AOC52422.1\|1699275_1700364_+\|calcium/proton-antiporter,-CaCA-family	gnl\|CDD\|273043	TIGR00378, cax, calcium/proton exchanger (cax). [Transport and binding proteins, Cations and iron carrying compounds].	6.26926e-142
CP012375.1\|AOC52407.1\|1683259_1683946_+\|Protein-of-unknown-function-DUF541	gnl\|CDD\|225516	COG2968, COG2968, Uncharacterized conserved protein [Function unknown].	1.56822e-42
CP012375.1\|AOC52406.1\|1681956_1682904_-\|hypothetical-protein	gnl\|CDD\|316753	pfam14261, DUF4351, Domain of unknown function (DUF4351). This domain is found in bacteria, and is approximately 60 amino acids in length.	0.00809085
CP012375.1\|AOC52415.1\|1689003_1690158_+\|Type-I-restriction-modification-system,-specificity-subunit-S	gnl\|CDD\|341188	cd17497, RMtype1_S_TteMORF1547P-TRD2-CR2_like, Type I restriction-modification system specificity (S) subunit Target Recognition Domain-ConseRved domain (TRD-CR), similar to Thermoanaerobacter tengcongensis S subunit (S.TteMORF1547P) TRD2-CR2. The recognition sequence is undetermined for Thermoanaerobacter tengcongensis S subunit (S.TteMORF1547P). The restriction-modification (RM) system S subunit consists of two variable target recognition domains (TRD1 and 2) and two conserved regions (CR1 and CR2) which separate the TRDs. The TRDs each bind to different specific sequences in the DNA. RM systems protect a bacterial cell against invasion of foreign DNA by endonucleolytic cleavage of DNA that lacks a site specific modification. The host genome is protected from cleavage by methylation of specific nucleotides in the target sites. In type I systems, both restriction and modification activities are present in one enzyme complex composed of one DNA specificity (S) subunit (this family), two modification (M) subunits and two restriction (R) subunits. This CD contains both TRD1-CR1 and TRD2-CR2. This subfamily of TRD-CR's shows similarity to TRD1-CR1 of Aminobacterium colombiense DSM 12261 S subunit (S.Aco12261I), which recognizes 5'... GCANNNNNNTGT ... 3'. This subfamily may also include TRD-CR-like sequence-recognition domains of various type II restriction enzymes and methyltransferases and type I DNA methyltransferases. S.TteMORF1547P TRD1-CR1 does not belong to this subfamily.	5.30092e-101
CP012375.1\|AOC52423.1\|1700366_1701044_-\|rRNA-small-subunit-7-methylguanosine-(m7G)-methyltransferase-GidB	gnl\|CDD\|234637	PRK00107, gidB, 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG.	9.88571e-69
CP012375.1\|AOC52416.1\|1690549_1693522_+\|Type-I-restriction-modification-system,-restriction-subunit-R	gnl\|CDD\|223683	COG0610, COG0610, Type I site-specific restriction-modification system, R (restriction) subunit and related helicases [Defense mechanisms].	1.25413e-89

>CP012375.1|AOC52415.1|1689003_1690158_+|Type-I-restriction-modification-system,-specificity-subunit-S
MTKKWQPYPTYKDSGVEWLGAIPEHWEVKKLKYISYLTMGQSPSSDDYNHEGYGSPFLQGNAEFGNRNPEAKIFCATVNKYAEKGDILISVRAPVGALNEADRRYGIGRGLCSIRPRDIIIREFAWYLIQVVKVELNFLSTGSTYEAVALTDVSNLSCLLPPLPEQQKIAEFLDQETGKIDKLITKKERLIKLLKEKRTALISHAVTKGLNPDVPMKDSGVEWLGEIPEHWEVKKCKQLSLIKRGASPRPIDDPSFFDDDGAYSWVRISDVTASNKYLETSEQKLSELGKSKSIALEPGELFVSICATVGKPIITNIKCCIHDGFVYFPFLRENREYLFYIFSGGELYKGMGKQGTQLNLNTDIIGDIKLPIPPFPNNKKSPNS
>CP012375.1|AOC52414.1|1688571_1688979_+|putative-nucleic-acid-binding-protein,-contains-PIN-domain
MKVVIDTNVVISAAIADRNPEKIILFVVSNPDFYWIVSPDILAEYREVLSRKRLKLTNEQKQYWLTLASAVTFVIDINLEIDFPRDRKDAKFLACAIVNNADYFITGDKDFDEVKNLGHTKIISVSLFQTKYQIK
>CP012375.1|AOC52413.1|1688335_1688575_+|hypothetical-protein
MNIYQKTLVIQDPNQLVLSDLPFQKGQQVEVMIIAKNYDREALANKLRDFFKEVQALHADNPLTEEEIEAEIEDYRRGK
>CP012375.1|AOC52412.1|1687998_1688244_+|hypothetical-protein
MPVIKLRSHIGEDGMLHLDIPPEFKGQEVDVTVTVEPITEEKTKTKETLSQARERFAKVREHFQGRNFLDSTELLREDRQR
>CP012375.1|AOC52411.1|1687756_1687978_+|hypothetical-protein
MTLREKMREYLENGLQLGWLIDTKSKTVEIYRANQEVEVLHNPTHLSGENILTDFVLDLDDPPHPPSKGGRSK
>CP012375.1|AOC52410.1|1685717_1687754_+|Type-I-restriction-modification-system,-DNA-methyltransferase-subunit-M
MNNFGDKVSFIWSIADLIRDTFKRGKYQDVILPFTVLRRLDCVLEPTKEEVLAAYHQYKDKLDNLDPLLCKKSGFAFYNSCPYDFEKLLDDPKQLAANLKLYINSFSGNMREVLEKFDFANTIDKLEQSDLLFLVTERFQNIDLHPDKVSNLEMGYIFEELIRKFNEALDENPGEHFTPREVIQLMVNLIFSPDKTQLSQEYITRSVYDPCCGSGGMLTIAKDRILELNPKAQVFLFGQEVNPETFAVCKSDLYMKSVDGKDAENIKFGSTLSQDQHSDKTFDYLLANPPYGKDWKRDKEAVETEAQKAGSRFSAGTPRISDGQLLFLQHMIARMKPETQGGSRVAIVMNGSPLFTGDAGSGESEIRRWILENDWLEAIIALPNDLFYNTGIATYIWVLTNHKAAERRGKVQLINASEFWLPMRKSLGSKRREISSQHIREITEIFQSFQPSEVSKIFDREDFGYRKITVERPLRLNFQASPERIERLKEQSAFASLAVSKKKSDEMKGIEEQAGKEQQRLILDILNSFPDTLYQDRGEFEKVLKKGMKTKGITLAPAVYKAILSALSERDESANICLDKQGNPEPDTDLRDTENVPLKQDINDYFDREVLPHVTDAWISDTVRDIRDGALGKVGYEINFNRYFYKYQPPRTLEAIEADIKEVEGEILAMLTSLEERI
>CP012375.1|AOC52409.1|1684993_1685368_+|hypothetical-protein
MKFLPIALATFSLLSLSVNIPPTVATQQLFCRGRMNNGWSYSAEFINGRFERIRWTRSGQPPQVSSLSFKNTNNKGQPIYRGSLFAAVSVTLIDLSKGDVRPGSQISVGVEEWGWSRGNCGFNS
>CP012375.1|AOC52408.1|1684063_1684951_+|2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate-hydrolase
MNYPNFLPTVREGLSEDTSLALLENIQQIAIDSPIYPRSILTTYSQQGQGQPPFVLLHGFDSSLLEFRRLLPLLAQNRETWAIDLLGFGFTERYPDLQVSPKTIKSHLYHFWQTAIAEPIILVGASMGGAVALDFALSHPEIVAKLVLIDSAGLANPPVLGKLMFSPLDKWATNFLANPRVRQNISRTAYFDATLATVDACTCANLHLNCPHWSEALISFTKSGGYGAFLPKLSQINRETLIIWGENDQILGTKDAKIFQQALPNNQLVWIPRCGHVPHLEKPELTAAAIVKFAN
>CP012375.1|AOC52407.1|1683259_1683946_+|Protein-of-unknown-function-DUF541
MAFLLSLILINTGLVMPSYANERELRTITVTGEGIENIATSQAIVRLGVEIQGKEAGKVQRETANRSDAVVKFLRSRQVEKLETTGISLQPNYDFSNNQRRLIGYIGANLISFQVDIAQAGILIDEAVKVGATRIDGVSFTAGESAIAAAQRTALIKATEQAREQATIVLQALGLVPKETVSIQVGNTSNPVPIARSEAVFRSADAASSPVIGGEQTLRAAVTLEISY
>CP012375.1|AOC52406.1|1681956_1682904_-|hypothetical-protein
MTRQIHDQFAKEYLEELLASLGTIKKSKKVKSEVQEIDVWFEPASSASRTELPLGILAKMAATCCLFEPFRNPPSEVEIRSCISKLYAVHGEVLRKAKRTNKTLTEAELPVLWILTPTFSARMIEEVVGIPPSFLPEEGMKEEWGKGVYFSPSLFKTGIVAIHQLPVNEETLWLRVLGKGGTQKRAVEELVQLPEGNPCQENLLEILANWRKSLELRDNLSAEEQEDIMNLSPAYLQQREEWKQEGIQEGIQRGSLEGQLSLITSLLEGRFGSLDAELSGLVEQIAQLPISERTGLLLSLANLSRSELLERFREN
>CP012375.1|AOC52416.1|1690549_1693522_+|Type-I-restriction-modification-system,-restriction-subunit-R
MIDTSEKNFEATIEASLLNSGYQRRSSKDYERSLCLIPEDVLNFIQTSQPQEWQKFQTQYGDDANTQLLKQLAEVIKNRGTLEVLRKGIKANSCRFQLAYFQPPSSLNPETQRLYQTNCFSVLRQLYYSQKNPLNSIDIVLFLNGLPIFTAELKNPFTGQNFQQAIKQYQEDRDPREPLLKFGVCLSHFAVDPDQVHVTTHLQGHETGFLPFNPGKTGVAANPDPTKFRSAYLWEQIWRQDSFLDLIQNFITLQEKKDDKDRKTGVKSLIFPRYHQLDAVRRLLADAKAEGTGKSYLIQHSAGSGKSNSIAWLAHGLVSLYDDHNSRVFDSIIVITDRRILDQQLQATIRQFEQTSGVVENIDKTSRQLKEALESGKNIIVTTLQKFSVIVDQIQSLSGQRFAVIVDEAHSSQTGESTKKLKSVLTATSLEAAAAEEGGEEEDLEDRIVSEAKKRGKIANLSYFAFTATPKPKTLEVFGTRQPDGSFAPFSLYSMAQAIEESFILDVLENYTTYKTYFNLLKTIEDDPHYDRARTASLLRHFVDLHEHTIKQKVAIIVEHFHEQVAHQVQGKAKAMIITRSRLHAVRYKLALDRYLKEKDYPYQSLVAFTGTVRDGEDFTETKMNSASSGTHIPDKATADTFQQAPYRFLVVANKFQTGFDQPLLGAMYIDKKLAGVNAVQTLSRLNRIHPHKTGTLVLDFANEADEIEAAFKDYYDCTILTEATDPNRLYKIQAQLDDYHFYQDSDIDSFAQIFFHPQGTQAKLHGSLDPVLDRYLEASEEEKVGFRGKLQEFIRLYGFVSQLLPIPAADLEKFYEFCRHLICKLPTSPEALPLPIQQSIELNSYRIQETHRGKIELKRGVRETSRVYSLGTGQPPTKKIEPLSKIIEEINRRFGTDFSEDERVFIEHLETKLDDSAPLKASLKINTPENVKLAFDILASDIMQDMVEINFSFYKKFTDDLEFKALLLGFLFNRFLQRSNTSEAKTDSV
>CP012375.1|AOC52417.1|1693630_1695067_+|Signal-recognition-particle,-subunit-Ffh-SRP54
MFDALADRLEDAWKKLRGQDKISSANIQETLKEVRRALLEADVNLQVVKGFIAEVEKQALGAEVISGVNPGQQFIKIVYDELVKIMGESNVPLAQADKPPTVILMAGLQGTGKTTATAKLALYLRKQSKSCLMVATDVYRPAAIDQLITLGKQINVPVFEMGSQANPVDIARQGVEKAKELGVDTVIIDTAGRLQIDTQMMGELAQIKKIVKPDDTLLVVDAMTGQEAASLTNTFHQQIGITGAILTKLDGDTRGGAALSVRQISGQPIKFVGVGEKVEALEPFYPDRLASRILNMGDVLTLVEKAQEQLDLEDAAKMQAKILEAKFDFNDFLKQMRLLKNMGSLGGVLKLIPGLGKLSGTDIEKGEKELKRTEAMINSMTTEERANPDLLAKSPNRRRRIAKGSGHPETEVNKLITNFTRMRSMMQQMGRGQMPAMPGMPGMGGGMFGGGNQPGFRGQGGSPKKPKKIKKKKGFGDL
>CP012375.1|AOC52418.1|1695070_1696039_-|Thiamine-monophosphate-kinase
MNLTVKDLGEQGLLPILQKYCPAEIIGDDGAILSLKEGYSLVVTTDVLVNNVHFSDLTTSPEDVGWRAAAANLSDLAAMGAEPLGITVGLALTPNLAIDWLEGLYRGLSSCLQVYQTAIVGGDVCRATEINISITALGQVAKNEEIRRFNAKVGDSIVITGYHGLSRAGLELLLHPETGRNLNSAQKKRLIQAHQRPRPRLDCIPHLQKIVKQFPIAGMDSSDGLADAIMQICRCSGVGAEIERIPLHPTLKEYVGAEKALEWALYGGEDFELVLCLPPDSARELLEKVGEEGAIIGQIVPGKEIKLADGRNLSLSSGFQHF
>CP012375.1|AOC52419.1|1696198_1696870_-|hypothetical-protein
MRSETESSPLEVSKTTKPPRLILEGLYAFSPNRETLGGTSYLIVENTGNILVDCPSCEESERDFLREKGVRYLFFTHRGGQGKQSDSLQSLLNCEIILQEQEAYLLPHRQITVFQQQIQLSPTCSGFWTPGHSPGSSCLYWNRHGGVLFTGRHLLPDTKGQPRPLQTAKTFHWLRQLRSQRAILDRFSPETLSYLCPGANTGFLRGRGIIDSAYEKISANLLN
>CP012375.1|AOC52420.1|1696974_1698459_+|hypothetical-protein
MEMWLLLGILGGFTYFIVKRSVAKITTTPIWLIWLVLMTPALIWTGWTLIYGEDTPMPAFLLIGPFVICPFLYWWLVQKGRVTPQESPPSPLETANLVLENIDNPAPKNDLKPITAAEEKSLRDCFPWGIYYLQNIDYRPQAILCRGKLRAVPEEAYQVIKNNVEKVFGDRFLLLFQESFQGQPFFALVANPWQQKTETIETEKVTRPLIFLGLLLLTLLTTTVIGAGLSGITTQQLENNSSVLLQGLPYSLGLIAILGLHEFSHYFTAVKYKIKTTLPYFIPFPFFLGTFGAFIQMRSPVPTRKALFDVAVAGPLGGIIIAIPLLFWGLSLSEIVPLTNQSSLLNFQALNPQFSFLLSIVAKLALGSDLIAGKAIHLHPLAVAGYVGIIVTALNLMPVGQLDGGHIVHAMYGQKTAIIIGQLTRLFMFILALVQPDFLLWAIILLLMPVSDQPALNDVTELDNKRDLLGLFSLALLLSILLPLPEAVARWWGM
>CP012375.1|AOC52421.1|1698615_1699248_+|hypothetical-protein
MVLKANSRRKKRVSPQGKLGKSRLKLLAIPLILASLGWLYYDLRQQWLKPEAIFVLGGHADRERFAAKLAKEYPDLPIWVSSGSPRRYVRKIFKKAGISPERLHLDYNARDTVTNFTSLADQLKAQGIDSVYLVTSDNHMRRARLVGEIVFGSRGIVIKPVTVPSQSPPEPLEKSLRDGFRAILWIITGSTGEFWLESDSSPPQFPTQSK
>CP012375.1|AOC52422.1|1699275_1700364_+|calcium/proton-antiporter,-CaCA-family
MLSKNTIFAILLIFVPLSIAGSLLHWGGTVVFITACLAIIPLAAYMGEATEAIAVVVGPNIGGLMNATFGNATELILAYVALREGFIDVVKATITGSIIGNLLLVMGLSMFLGGLRFKEQEFQPITARLNASAMNLAVVALLLPTAVEFTSTGVGEPVLQRLSVAVAAVLIFVYGLSLLFSMKTHTYLYDVGIAGIEEESTGENPEKPKIWFWSLILLIVTIAVAVESELLVASLEEATEQLGLTALFTGVILLPIIGNAAEHATAVTVALKNKMDLSVSVAVGSSMQIALFVAPVLVIMGYIIGQPMDLNFNPFELVAVAVAVWLANSISSDGRSNWLEGMLLLATYTILALAFFFHPLTA
>CP012375.1|AOC52423.1|1700366_1701044_-|rRNA-small-subunit-7-methylguanosine-(m7G)-methyltransferase-GidB
MILPELFDLWQETLEWQPDGAQQARFQQLYELILEGNQRFNLTRITQPEEFWEKHLWDSLSGLAWLQKSQPDLLTKSLSVIDLGTGAGFPGVPIAIAYTHWSVTLLDSTQKKINFLEEVIDKLELNNTKTRLGRAEIVGKNLKHNCAYDIVCLRAVGNVDICVNYALPFLKKTGIAILYRGQWSEQDSLSLEENLGKAGGKILEIASFTTPLSQSIRHCLYISKK
>CP012375.1|AOC52424.1|1701129_1701291_-|Iron(III)-transport-ATP-binding-protein-sfuC
MRRQLAKLLASLKQHWTLLVVSHDAGELLPIADRHWKIEQGHLRELKSEKTDS
>CP012375.1|AOC52425.1|1701524_1702172_-|Iron(III)-transport-ATP-binding-protein-sfuC
MLYLKDVVYHPPAALNPILQGINLELAPQELGLIVGPSGSGKTTLLEILAGFADKTAGTIHWRDQELTVLHLQQLGGIVFQFPERHFCGKTILEELRLGHPEIKSDRLTAALKEVGLENIPLDNSPHNLSGGQQRRLSLAVQLIRQPNLLLLDEPTAGLDWSMRRQLAKLLASLKQHWTLLVVSHDAGELLPIADRHWKIEQGHLRELKSEKTDS

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Crispr_ID: CP012375_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP012375_9

1863206-1863304

TypeV

Consensus_repeat	Method
TCTTTACTAGGGGATAAGTTTGTACTTGTTAAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP012375_9

>merge|CP012375|9|1863206-1863304|CRISPRCasFinder
TCTTTACTAGGGGATAAGTTTGTACTTGTTAAGAATACATCTGTATCCCCTAGTAAATCTTCCCGTTCTTTACTAGGGGATAAGTTTGTACTGGTTAAG

>CP012375|9|9|1863206-1863304|CRISPRCasFinder
TCTTTACTAGGGGATAAGTTTGTACTTGTTAAG	AATACATCTGTATCCCCTAGTAAATCTTCCCGT
TCTTTACTAGGGGATAAGTTTGTACTGGTTAAG

Protein	Signature genes	Signature genes Name	Protein_function
CP012375.1\|AOC52591.1\|1858165_1858882_+\|putative-secreted-hydrolase	unknown	unknown	gnl\|CDD\|366226
CP012375.1\|AOC52599.1\|1863875_1864196_-\|Mobile-element-protein	unknown	unknown	unknown
CP012375.1\|AOC52607.1\|1875173_1875416_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182082
CP012375.1\|AOC52602.1\|1866254_1869275_-\|High-affnity-carbon-uptake-protein-Hat/HatR	unknown	unknown	gnl\|CDD\|227265
CP012375.1\|AOC52605.1\|1872444_1874289_-\|Maltodextrin-glucosidase	unknown	unknown	gnl\|CDD\|200489
CP012375.1\|AOC52597.1\|1862919_1863042_-\|hypothetical-protein	unknown	unknown	unknown
CP012375.1\|AOC52596.1\|1862588_1862801_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235655
CP012375.1\|AOC52606.1\|1874641_1874803_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|350320
CP012375.1\|AOC52590.1\|1857216_1857681_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|366774
CP012375.1\|AOC52604.1\|1871740_1872064_-\|hypothetical-protein	unknown	unknown	unknown
CP012375.1\|AOC52595.1\|1861349_1861751_+\|Mobile-element-protein	unknown	unknown	gnl\|CDD\|226202
CP012375.1\|AOC52594.1\|1861055_1861349_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|375906
CP012375.1\|AOC52600.1\|1864237_1865200_+\|Tyrosine-recombinase-XerC	unknown	unknown	gnl\|CDD\|271195
CP012375.1\|AOC52593.1\|1860603_1860987_+\|hypothetical-protein	unknown	unknown	unknown
CP012375.1\|AOC52588.1\|1855714_1856698_+\|Putative-sulfite-oxidase-subunit-YedY	unknown	unknown	gnl\|CDD\|235431
CP012375.1\|AOC52598.1\|1863364_1863922_-\|Mobile-element-protein	unknown	unknown	gnl\|CDD\|315923
CP012375.1\|AOC52592.1\|1860361_1860520_+\|hypothetical-protein	unknown	unknown	unknown
CP012375.1\|AOC52589.1\|1856741_1857200_+\|Protein-of-unknown-function-DUF29	unknown	unknown	gnl\|CDD\|366774
CP012375.1\|AOC52603.1\|1869434_1871669_-\|Alkaline-serine-protease	unknown	unknown	gnl\|CDD\|274507
CP012375.1\|AOC52601.1\|1865508_1866039_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP012375.1\|AOC52591.1\|1858165_1858882_+\|putative-secreted-hydrolase	gnl\|CDD\|366226	pfam00652, Ricin_B_lectin, Ricin-type beta-trefoil lectin domain.	2.70195e-13
CP012375.1\|AOC52607.1\|1875173_1875416_+\|hypothetical-protein	gnl\|CDD\|182082	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE.	7.40902e-05
CP012375.1\|AOC52602.1\|1866254_1869275_-\|High-affnity-carbon-uptake-protein-Hat/HatR	gnl\|CDD\|227265	COG4928, COG4928, Predicted P-loop ATPase [General function prediction only].	1.84379e-19
CP012375.1\|AOC52600.1\|1864237_1865200_+\|Tyrosine-recombinase-XerC	gnl\|CDD\|271195	cd01195, INT_C_like_5, Uncharacterized site-specific tyrosine recombinase, C-terminal catalytic domain. Tyrosine recombinase (integrase) belongs to a DNA breaking-rejoining enzyme superfamily. The catalytic domain contains six conserved active site residues. The recombination reaction involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA. Many DNA breaking-rejoining enzymes also have N-terminal domains, which show little sequence or structure similarity.	1.1981e-56
CP012375.1\|AOC52590.1\|1857216_1857681_+\|hypothetical-protein	gnl\|CDD\|366774	pfam01724, DUF29, Domain of unknown function DUF29. This family consists of various hypothetical proteins from cyanobacteria, none of which are functionally described. The aligned region is approximately 120-140 amino acids long corresponding to almost the entire length of the proteins in the family. Structure 3fcn is a small protein that has a novel all-alpha fold. The N-terminal helical hairpin is likely to function as a dimerization module. This protein is a member of PFam family PF01724. The function of this protein is unknown. One protein sequence contains a fusion of this protein and a DnaB domain, suggesting a possible role in DNA helicase activity (hypothetical). Dali hits have low Z and high rmsd, suggesting probably only topological similarities (not functional relevance) (details derived from TOPSAN). The family has several highly conserved sequence motifs, including YD/ExD, DxxNVxEEIE, and CPY/F/W, as well as conserved tryptophans.	5.9e-63
CP012375.1\|AOC52606.1\|1874641_1874803_-\|hypothetical-protein	gnl\|CDD\|350320	cd18753, PIN_VapC4-5_FitB-like, uncharacterized subgroup of the PIN_VapC4-5_FitB-like subfamily of the PIN domain superfamily. The PIN_VapC4-5_FitB-like subfamily includes the Virulence associated protein C (VapC)-like PIN (PilT N terminus) domain of Mycobacterium tuberculosis VapC4 and VapC5 ribonuclease toxins of the VapBC toxin/antitoxin (TA) system, and Neisseria gonorrhoeae FitB toxin of the FitAB TA system. This subfamily belongs to the VapC-like family of the PIN domain nuclease superfamily. VapC is the PIN-domain ribonuclease toxin from prokaryotic VapBC toxin-antitoxin (TA) systems. VapB is a transcription factor-like protein antitoxin acting as an inhibitor. Other members of the VapC-like nuclease family include eukaryotic ribonucleases such as Smg6, ribosome assembly factor NOB1, exosome subunit Rrp44 endoribonuclease and rRNA-processing protein Fcf1. The structural properties of the PIN (PilT N terminus) domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions, in some members, additional metal coordinating residues can be found. Some members of the superfamily lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	1.99818e-19
CP012375.1\|AOC52596.1\|1862588_1862801_-\|hypothetical-protein	gnl\|CDD\|235655	PRK05958, PRK05958, 8-amino-7-oxononanoate synthase; Reviewed.	0.00542043
CP012375.1\|AOC52595.1\|1861349_1861751_+\|Mobile-element-protein	gnl\|CDD\|226202	COG3677, COG3677, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	2.7415e-13
CP012375.1\|AOC52594.1\|1861055_1861349_+\|hypothetical-protein	gnl\|CDD\|375906	pfam18480, DUF5615, Domain of unknown function (DUF5615). This is a domain of unknown function found in potential toxin-antitoxin system component.	0.0030722
CP012375.1\|AOC52588.1\|1855714_1856698_+\|Putative-sulfite-oxidase-subunit-YedY	gnl\|CDD\|235431	PRK05363, PRK05363, protein-methionine-sulfoxide reductase catalytic subunit MsrP.	4.00494e-165
CP012375.1\|AOC52598.1\|1863364_1863922_-\|Mobile-element-protein	gnl\|CDD\|315923	pfam13358, DDE_3, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	1.08471e-32
CP012375.1\|AOC52589.1\|1856741_1857200_+\|Protein-of-unknown-function-DUF29	gnl\|CDD\|366774	pfam01724, DUF29, Domain of unknown function DUF29. This family consists of various hypothetical proteins from cyanobacteria, none of which are functionally described. The aligned region is approximately 120-140 amino acids long corresponding to almost the entire length of the proteins in the family. Structure 3fcn is a small protein that has a novel all-alpha fold. The N-terminal helical hairpin is likely to function as a dimerization module. This protein is a member of PFam family PF01724. The function of this protein is unknown. One protein sequence contains a fusion of this protein and a DnaB domain, suggesting a possible role in DNA helicase activity (hypothetical). Dali hits have low Z and high rmsd, suggesting probably only topological similarities (not functional relevance) (details derived from TOPSAN). The family has several highly conserved sequence motifs, including YD/ExD, DxxNVxEEIE, and CPY/F/W, as well as conserved tryptophans.	5.50719e-66
CP012375.1\|AOC52603.1\|1869434_1871669_-\|Alkaline-serine-protease	gnl\|CDD\|274507	TIGR03296, hypothetical_protein, M6 family metalloprotease domain. This model describes a metalloproteinase domain, with a characteristic HExxH motif. Examples of this domain are found in proteins in the family of immune inhibitor A, which cleaves antibacterial peptides, and in other, only distantly related proteases. This model is built to be broader and more inclusive than pfam05547.	2.73019e-48
CP012375.1\|AOC52605.1\|1872444_1874289_-\|Maltodextrin-glucosidase	gnl\|CDD\|200489	cd11352, AmyAc_5, Alpha amylase catalytic domain found in an uncharacterized protein family. The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues (Asp, Glu and Asp) performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase.	0

>CP012375.1|AOC52597.1|1862919_1863042_-|hypothetical-protein
MDQIRQLDRMGRPIDGILEAIDSPKAREVLAEYREFLKNK
>CP012375.1|AOC52596.1|1862588_1862801_-|hypothetical-protein
MLAIHAAKRPLCKQGKSLISHLNRAFNLSIDGDKLPLGAIVALTDLTDCLEMVSEANATDVPNSIIENLG
>CP012375.1|AOC52595.1|1861349_1861751_+|Mobile-element-protein
MEEIKMQCPECKSTHIRKNGINKQGKQNHICVTCGRQFINNYEKQKGYDEKTKRECLTAYVNGMGFRGIERLKGVHHTTVINWVKSVGELLPVAYDPETIPEVGELDELETFVGSKKTKSGCGQPLTTLKKEF
>CP012375.1|AOC52594.1|1861055_1861349_+|hypothetical-protein
MISIRFILFEEVGLAVTSDDRVVWRYAQANQMILITANRSMKGKDSLEQVMREENTPTSLPVVTIGNIERLLAEPDYRDRCVNRLVDIVVRRCIIEI
>CP012375.1|AOC52593.1|1860603_1860987_+|hypothetical-protein
MAPASNGKTAIIRTERGLTIAGTRITLYDVMDYITEHYPPKFIRAMLALNDEQLNAALSYIETYRAEVEAEYQLVLKEAEELRQYYEEQNRERVARIAAKPPKPGTEAIRAKLQAEKAKLASRAGIF
>CP012375.1|AOC52592.1|1860361_1860520_+|hypothetical-protein
MIELLATYPDRAELHQEFPELEDEDIRQALIFASSYLDDRIIELPNRYEAVT
>CP012375.1|AOC52591.1|1858165_1858882_+|putative-secreted-hydrolase
MRFSKALRFRSISILFISIFVALQVHFFPALRPANSEPVTLGTVAAVVALVKAVSASGLARGVCFSGLHMGAKECRKPSRCVEAIERVENIVNTNGSSESVRQLESWIGSASQNENCAISLSRHLTVNVNIVGLTRSAVAELDRLRNPTITSLTSGNALVNAGGKCLDIHAPDMRNNGSRVQVWDCNGQPQQQWSFSGNALVNAGGKCLDIHAPDMRNNGSRVQVWDCNGQPQQQWRF
>CP012375.1|AOC52590.1|1857216_1857681_+|hypothetical-protein
MDNKTLYEQDFYLWIRTTINQLQARQFERVDLENLLEELASMGRSEKRTIKSLLTRLLEHLLKLKYWAAERERNEGHCKGEIRTFRLDILDELKDSPSLKPYLLEIFDECYLSVRKNASDRSQLPLDTFPAIPLGSLEQILDEDWFPAGDNLEI
>CP012375.1|AOC52589.1|1856741_1857200_+|Protein-of-unknown-function-DUF29
MDNKTLYEQDFYLWIRTTINQLQARQFERVDLENLLEELASMGRSEKRKIENLLIQLLVHLLKLTYWTGEKSRNEGHWKGEIINFRRQIIEEIKDSPSLKPYILEIFEECYQFARKEAQVRTQLPLDTFPTIPIGSLEQILDEDWFPTNNHE
>CP012375.1|AOC52588.1|1855714_1856698_+|Putative-sulfite-oxidase-subunit-YedY
MVLIRLAKSWQISENEVTSESVYFNRRRFLQGLIGAGIAGSSLLLTACGKSSSSEALEKSLQLPKIAGFSKNPNFLTVNRPIVAETVAGRYNNFYEFGGGKNIWLKAQKLPTNPWTVEVGGLVKNPQTYDIETIKKTFPLEERIYRFRCVEAWSMVLPWLGFPMSALIAAVEPKPEAKFVRFTSFYDPEITKGPGLHLGALPWPYTEGLRIEEMANELAFFAVGIFGHDLPKQHGAPLRMVIPWKYGFKGAKSIVKIEFTAKQPATYWNTIDDHEYDFEANVNPSKPHPRWSQATEKFIGSRSDLSWEIIETLPYNGYGEYVASLYS
>CP012375.1|AOC52598.1|1863364_1863922_-|Mobile-element-protein
MDLLEKKTYGYRERDEEARKEFLQKIRGYAPERFVYIDEAGIDNTIDYPYGYCHKSERFEALKLGHCSERVSVISGWWRGSTIAPMVFEGYCNTELVCEWIEQLLLPELLPGQIIIIDNASFHPKERIKKLLAKAGCEVLFLPAYSPDLNKIEKFWARLKNYVSQIINDSENLVDAVSKAFRHLS
>CP012375.1|AOC52599.1|1863875_1864196_-|Mobile-element-protein
MSAVERGEKKSHVCRTLNISRNTLDIWLKRKKQTGTVAAKTNYRRGPKPQIDDLEAFQKFAEQYGHLTQEKMAQKWANPVSRMRIGQALKRIGFTRKKNLWLQRKR
>CP012375.1|AOC52600.1|1864237_1865200_+|Tyrosine-recombinase-XerC
MSATDLTKREDIAPLDNPDVLAQLLAAKRSPRTRHAYAGDLKDFFVFAFGCEEPTPGVTQEFLSLDRFAALSLVLRYKAHLRDERGLAEATRNRRLSAIKSLVRLANQLGQCDFNLSELSGDKVVRYRDTTGVSKEVYRDLLAVPDRSTLKGKRDYAILRLLWDNALRRGEIESADIKDLDTEGRTLAIFGKGRGQQKETVSLSRPTLDALVDWLRERRELDIRQPLFIALDRCSRGHRLTGSAIHKLVAKIAAAAGVNKKMSPHRVRHSGITAALDATGGDVRRVQKLSRHADLNTLMIYDDNRKNVQGEISDLLAGLV
>CP012375.1|AOC52601.1|1865508_1866039_+|hypothetical-protein
MRPLAVLAPQQQPTVWNESVAEAGGRTPDHRIVRETVGKYRDKGKANVFEVGEVVGILAKDNPRLKGKNNCWAIVTAVHPRSCDLRLHDGAIDLVKIEYLKELGYTEGDCQTVRRLCERKALATRDRLSRLREREDLEDAALAFLGILGKLQRPYLSALEEEMLTMLEKYYGVVTD
>CP012375.1|AOC52602.1|1866254_1869275_-|High-affnity-carbon-uptake-protein-Hat/HatR
MKRKALVIGVNQYKEGIPCPQHSLKDAEDIAELLRTIGQFDQVQILLNQFEQQDKDHKNPYEPDQLKFLIEQLFNPQDGDTETALFYFSGNGAEIYEAEGKETQKGELLLTDFPNPLNESSSEHTSELRSRSISLKWLHDQLEKSPVKQQIVWLDSDFSNLFIDLFSQTSSEVKYDRCFIAASYDYAGENSTHGVLTDALLSCLNPVIKILITNYTLEDALINTFNWQKNLIKNIGNRILLTGRNVRPQKLWNDLAEGKDLLNLKSEADALADMLLLRDLEPPLAVGILGGWGSGKSFIMNLMQQRMNEIRSASLTKKQTWGKEEEAFPYVGHIYQIKFDAWTYAKADLWYSLTQTIFYEFNRQYTLEQQIEQSLKKVNRSQLEGGKFWKALNAMSEFDRTASLRELANFSEQTYNELEKSKSDQEFSSSLWEKIGDIRKNEKSELQNLKERLRKENRKLRGLILRKMPSYFLQKNWLSLVAFLAGLSIVAFPLLPDQLRDQLPKKLSDVLSTYTTLIQTGGFITALGTGISLLQKTQEEQEKILTGLKQIAGEAKEKFEVGKDVWVTLQQEILQSDRDIEQQVNKIKRHELQIEQLQQQIGLVSNYPTLNTFLEDISKNELYEKKLGYLHQLQRNLAELTNCLHYNPKMKDNDEQFSKLEKTFPRGPARIVLFIDDLDRCPPDRVVEVLEAVQLLVKTPLFIAVVAIDERYVTRALEKYYAGVLFHQGRPSGTDYLEKIIQIPYRIRPVAHSALANYLHQQMEVEESDEETSNVAVSTENISTISVDNSQSNKTDFTENKVGGKLLDSDRDKSVTILTPEKIKFKSEEFKILLECCRHTDLPPRMIKRLVNIYKIFKIIEFLSNKVWLKSNEQTKAILSVLSLSAYYPDLIREVFDDLDIQFEELESQLEGLKQEEKQQQMQKLKLLDSLLKTLESLLNTSEEKDAPHLQREYRRLHHDATILLSGITLAQFDLETFNLVRSFCFFGDVGYSPEDSQRTVRSHQG
>CP012375.1|AOC52603.1|1869434_1871669_-|Alkaline-serine-protease
MSAIFGETVIFQQDNGLDVELVVFGDEFYARYETKDGYTAVYDPERGLYCYAVLLNGRFASSGVPISKHPPSDIRRGLKEAETIRNEKFERRYADLRPPQPGAAANVARTLGPNNGLLEGRRVSEGHIRGLTVLVEFADLTSAVTAADVEAMLNAPNYRENGNFCSVREYYHLMSNGKLDYSNVVVGPIKLSQNQRYYVQNLLCREALDKVVNQLRINLSQFDSCGESIVDALSFMYAGRTVYEGNLWPHNSELNLIYNGIKVRYYTIQSLGRERVDLSIGTFCHESGHLLCRLPDLYDYGSRDGDFEKSAGMGYYCLMSAGNHLNNGHTPAPICGYLRDLVGWCDRQVRLNSPGVYESKQGDYGTLMKYETDRANEYFIIENRTQRGLDAYLPDSGLAVYHCDTLGSNEWQGGTRERHYQCGLLQADGHLDIESNRNQGDSTDLFKRVDGVALSYATTPSTRDWDSSDSGLALADISEPGEVIRLKVGSLVPSNVVTGKVTADLLIPDNKREGISCAIAISQAGKVKSLSVSIDITHTYIGDLQVELQSPSGKKVLLHDRAGGSRRDWQQTYSSSSTPALSVLNGELIAGDWLLNVRDLASRDIGRLNRWNIEIEYESAGQVARGEVSPNLSIPDNTPTGISSAIAIAQSGTLKDISVGVVIPHTYIGDLLVEIVAPSGQSVTLHNISGGSKDNLRMTYDRTSTPALEALIGQPIQGNWSLRVKDLQRLDTGKLEKWSLQLMY
>CP012375.1|AOC52604.1|1871740_1872064_-|hypothetical-protein
MSAIFGETLTFPQENGPEVELVVFGDEFYSRRETKDGYTVIYDDKLGQYGYAILCEGEFASSGIPISAPPSPGLQPHLEETEPIRREKFARRYTQLRPSDPDLPSQT
>CP012375.1|AOC52605.1|1872444_1874289_-|Maltodextrin-glucosidase
MTTTVQGLSQLNFASLSPAGGLFPSPIAWEDQAFYFLMLDRFSNGRENGYKDNEGNFVQSGTTLPYSPADAGNAVKTEADAARWREAGTKYVGGTLKGLESKIGYLKRLGVTALWISPIFKQVRFRETYHGYGIQNFLEVEPHFGSREDLQKVVQTAHANGIYVILDIILNHAGNVFSYLGEQDHPWTGEMYPVEGFNDKNGSPTIPFTKPDPQNPPDYDGALFPVELQAPDTFTRKGYIKNWDYDPEFREGDFFDLKDIDHGYGSADDYLVSPALRHLCEAYKYWIAYADIDGFRIDTVKHMDMGATRYFVSVIREFAQGIGKENFFLLGEITGGRKRAYETLELTGLSAALGIDDIPDKLEYLVKGYRNPNEYFSLFRNSELVNKSSHIWFRNKMVTSFDDHDQVRKGNQKARFCADADASKVVLNVLALNALTLGIPCIYYGSEQCFDGRGGSDRYIRESMFGGEFGAFRTRGLHFFNEDHLVYRELAKILEIRRQNILLRRGRQYLRPISAPDDGVRFNLPEMVNGQIRSVVPWSRIFDGKEMLLAINTDYDQPKTAWVTIDNDLHCAGDGLTCLYSTDATQIGQSVTVAARNGKAVLVTVPAAAFVIFE
>CP012375.1|AOC52606.1|1874641_1874803_-|hypothetical-protein
MRKKGNPIPTNYMWIAATALQYNLALFSYDKHFRAIDGLITGNSIADFAIIRS
>CP012375.1|AOC52607.1|1875173_1875416_+|hypothetical-protein
MELVTLDRSRCIQIPETLLEQLGIEYDSQFQVEVQDGKLVLNPIKEEPKVYYENDVLVVDSQLLVNTEAFIEELRQERMS

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Crispr_ID: CP012375_10

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP012375_10

1876472-1876638

TypeV

Consensus_repeat	Method
CTCTCTACTCGCCCTTAGAAATC	CRISPRCasFinder

2 spacers

cas14j

The CRISPR arrays of CP012375_10

>merge|CP012375|10|1876472-1876638|CRISPRCasFinder
CTCTCTACTCGCCCTTAGAAATCCGTGAAATCGAAACATCATATTTCGCTGTACGCGTCTGGGTTGAACGGCTCTCTACTCGCCCTTAGAAATCCGTTGAATGGAAACTAACCAGTAAGATTCGTCAGCCGATGGATTCATAGTCTCTCTACTCGCGCTTAGAAATC

>CP012375|10|10|1876472-1876638|CRISPRCasFinder
CTCTCTACTCGCCCTTAGAAATC	CGTGAAATCGAAACATCATATTTCGCTGTACGCGTCTGGGTTGAACGG
CTCTCTACTCGCCCTTAGAAATC	CGTTGAATGGAAACTAACCAGTAAGATTCGTCAGCCGATGGATTCATAGT
CTCTCTACTCGCGCTTAGAAATC

Protein	Signature genes	Signature genes Name	Protein_function
CP012375.1\|AOC52604.1\|1871740_1872064_-\|hypothetical-protein	unknown	unknown	unknown
CP012375.1\|AOC52609.1\|1876784_1877906_+\|Mobile-element-protein	cas14j	-	gnl\|CDD\|223747
CP012375.1\|AOC52614.1\|1881558_1881777_-\|hypothetical-protein	unknown	unknown	unknown
CP012375.1\|AOC52602.1\|1866254_1869275_-\|High-affnity-carbon-uptake-protein-Hat/HatR	unknown	unknown	gnl\|CDD\|227265
CP012375.1\|AOC52617.1\|1882367_1882505_+\|hypothetical-protein	unknown	unknown	unknown
CP012375.1\|AOC52600.1\|1864237_1865200_+\|Tyrosine-recombinase-XerC	unknown	unknown	gnl\|CDD\|271195
CP012375.1\|AOC52616.1\|1881950_1882175_-\|hypothetical-protein	unknown	unknown	unknown
CP012375.1\|AOC52606.1\|1874641_1874803_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|350320
CP012375.1\|AOC52599.1\|1863875_1864196_-\|Mobile-element-protein	unknown	unknown	unknown
CP012375.1\|AOC52613.1\|1879829_1881566_-\|serine/threonine-kinase	unknown	unknown	gnl\|CDD\|224182
CP012375.1\|AOC52605.1\|1872444_1874289_-\|Maltodextrin-glucosidase	unknown	unknown	gnl\|CDD\|200489
CP012375.1\|AOC52601.1\|1865508_1866039_+\|hypothetical-protein	unknown	unknown	unknown
CP012375.1\|AOC52611.1\|1878480_1878882_+\|Mobile-element-protein	unknown	unknown	gnl\|CDD\|226202
CP012375.1\|AOC52612.1\|1879633_1879876_-\|serine/threonine-kinase	unknown	unknown	gnl\|CDD\|224182
CP012375.1\|AOC52615.1\|1881758_1881890_-\|hypothetical-protein	unknown	unknown	unknown
CP012375.1\|AOC52608.1\|1875420_1875858_+\|Toxin-1,-PIN-domain	unknown	unknown	gnl\|CDD\|350248
CP012375.1\|AOC52610.1\|1877937_1878480_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377411
CP012375.1\|AOC52603.1\|1869434_1871669_-\|Alkaline-serine-protease	unknown	unknown	gnl\|CDD\|274507
CP012375.1\|AOC52607.1\|1875173_1875416_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182082
CP012375.1\|AOC52618.1\|1882461_1882695_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP012375.1\|AOC52613.1\|1879829_1881566_-\|serine/threonine-kinase	gnl\|CDD\|224182	COG1262, COG1262, Uncharacterized conserved protein [Function unknown].	3.81809e-48
CP012375.1\|AOC52609.1\|1876784_1877906_+\|Mobile-element-protein	gnl\|CDD\|223747	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	3.33233e-71
CP012375.1\|AOC52602.1\|1866254_1869275_-\|High-affnity-carbon-uptake-protein-Hat/HatR	gnl\|CDD\|227265	COG4928, COG4928, Predicted P-loop ATPase [General function prediction only].	1.84379e-19
CP012375.1\|AOC52612.1\|1879633_1879876_-\|serine/threonine-kinase	gnl\|CDD\|224182	COG1262, COG1262, Uncharacterized conserved protein [Function unknown].	5.3775e-14
CP012375.1\|AOC52606.1\|1874641_1874803_-\|hypothetical-protein	gnl\|CDD\|350320	cd18753, PIN_VapC4-5_FitB-like, uncharacterized subgroup of the PIN_VapC4-5_FitB-like subfamily of the PIN domain superfamily. The PIN_VapC4-5_FitB-like subfamily includes the Virulence associated protein C (VapC)-like PIN (PilT N terminus) domain of Mycobacterium tuberculosis VapC4 and VapC5 ribonuclease toxins of the VapBC toxin/antitoxin (TA) system, and Neisseria gonorrhoeae FitB toxin of the FitAB TA system. This subfamily belongs to the VapC-like family of the PIN domain nuclease superfamily. VapC is the PIN-domain ribonuclease toxin from prokaryotic VapBC toxin-antitoxin (TA) systems. VapB is a transcription factor-like protein antitoxin acting as an inhibitor. Other members of the VapC-like nuclease family include eukaryotic ribonucleases such as Smg6, ribosome assembly factor NOB1, exosome subunit Rrp44 endoribonuclease and rRNA-processing protein Fcf1. The structural properties of the PIN (PilT N terminus) domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions, in some members, additional metal coordinating residues can be found. Some members of the superfamily lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	1.99818e-19
CP012375.1\|AOC52605.1\|1872444_1874289_-\|Maltodextrin-glucosidase	gnl\|CDD\|200489	cd11352, AmyAc_5, Alpha amylase catalytic domain found in an uncharacterized protein family. The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues (Asp, Glu and Asp) performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase.	0
CP012375.1\|AOC52611.1\|1878480_1878882_+\|Mobile-element-protein	gnl\|CDD\|226202	COG3677, COG3677, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	2.4659e-13
CP012375.1\|AOC52608.1\|1875420_1875858_+\|Toxin-1,-PIN-domain	gnl\|CDD\|350248	cd18681, PIN_MtVapC27-VapC40_like, VapC-like PIN domain of Mycobacterium tuberculosis VapC27, and VapC40, and related proteins. This subfamily includes Mycobacterium tuberculosis VapC27 and VapC40. It belongs to the VapC (virulence-associated protein C)-like family of the PIN domain nuclease superfamily. VapC is the PIN-domain ribonuclease toxin from prokaryotic VapBC toxin-antitoxin (TA) systems. VapB is a transcription factor-like protein antitoxin acting as an inhibitor. Other members of the VapC-like nuclease family include FitB toxin of the FitAB TA system, eukaryotic ribonucleases such as Smg6, ribosome assembly factor NOB1, exosome subunit Rrp44 endoribonuclease and rRNA-processing protein Fcf1. The structural properties of the PIN (PilT N terminus) domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions, in some members, additional metal coordinating residues can be found. Some members of the superfamily lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	5.81306e-16
CP012375.1\|AOC52610.1\|1877937_1878480_+\|hypothetical-protein	gnl\|CDD\|377411	pfam04832, SOUL, SOUL heme-binding protein. This family represents a group of putative heme-binding proteins. Our family includes archaeal and bacterial homologs.	5.88179e-06
CP012375.1\|AOC52603.1\|1869434_1871669_-\|Alkaline-serine-protease	gnl\|CDD\|274507	TIGR03296, hypothetical_protein, M6 family metalloprotease domain. This model describes a metalloproteinase domain, with a characteristic HExxH motif. Examples of this domain are found in proteins in the family of immune inhibitor A, which cleaves antibacterial peptides, and in other, only distantly related proteases. This model is built to be broader and more inclusive than pfam05547.	2.73019e-48
CP012375.1\|AOC52600.1\|1864237_1865200_+\|Tyrosine-recombinase-XerC	gnl\|CDD\|271195	cd01195, INT_C_like_5, Uncharacterized site-specific tyrosine recombinase, C-terminal catalytic domain. Tyrosine recombinase (integrase) belongs to a DNA breaking-rejoining enzyme superfamily. The catalytic domain contains six conserved active site residues. The recombination reaction involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA. Many DNA breaking-rejoining enzymes also have N-terminal domains, which show little sequence or structure similarity.	1.1981e-56
CP012375.1\|AOC52607.1\|1875173_1875416_+\|hypothetical-protein	gnl\|CDD\|182082	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE.	7.40902e-05

>CP012375.1|AOC52608.1|1875420_1875858_+|Toxin-1,-PIN-domain
MIKVLFDTSVLVASILVNHEQHSACISWLTRVKRGEIQGYIGTHTLAELYAILSAFPAKPRLSPQLVQQLIKENLDSFEIISLTSDDYKAVINLMVTLNLRGGAIYDALIAYGSLKAEVDHLLTLNLKHFIRFGGRIEKISMEPR
>CP012375.1|AOC52607.1|1875173_1875416_+|hypothetical-protein
MELVTLDRSRCIQIPETLLEQLGIEYDSQFQVEVQDGKLVLNPIKEEPKVYYENDVLVVDSQLLVNTEAFIEELRQERMS
>CP012375.1|AOC52606.1|1874641_1874803_-|hypothetical-protein
MRKKGNPIPTNYMWIAATALQYNLALFSYDKHFRAIDGLITGNSIADFAIIRS
>CP012375.1|AOC52605.1|1872444_1874289_-|Maltodextrin-glucosidase
MTTTVQGLSQLNFASLSPAGGLFPSPIAWEDQAFYFLMLDRFSNGRENGYKDNEGNFVQSGTTLPYSPADAGNAVKTEADAARWREAGTKYVGGTLKGLESKIGYLKRLGVTALWISPIFKQVRFRETYHGYGIQNFLEVEPHFGSREDLQKVVQTAHANGIYVILDIILNHAGNVFSYLGEQDHPWTGEMYPVEGFNDKNGSPTIPFTKPDPQNPPDYDGALFPVELQAPDTFTRKGYIKNWDYDPEFREGDFFDLKDIDHGYGSADDYLVSPALRHLCEAYKYWIAYADIDGFRIDTVKHMDMGATRYFVSVIREFAQGIGKENFFLLGEITGGRKRAYETLELTGLSAALGIDDIPDKLEYLVKGYRNPNEYFSLFRNSELVNKSSHIWFRNKMVTSFDDHDQVRKGNQKARFCADADASKVVLNVLALNALTLGIPCIYYGSEQCFDGRGGSDRYIRESMFGGEFGAFRTRGLHFFNEDHLVYRELAKILEIRRQNILLRRGRQYLRPISAPDDGVRFNLPEMVNGQIRSVVPWSRIFDGKEMLLAINTDYDQPKTAWVTIDNDLHCAGDGLTCLYSTDATQIGQSVTVAARNGKAVLVTVPAAAFVIFE
>CP012375.1|AOC52604.1|1871740_1872064_-|hypothetical-protein
MSAIFGETLTFPQENGPEVELVVFGDEFYSRRETKDGYTVIYDDKLGQYGYAILCEGEFASSGIPISAPPSPGLQPHLEETEPIRREKFARRYTQLRPSDPDLPSQT
>CP012375.1|AOC52603.1|1869434_1871669_-|Alkaline-serine-protease
MSAIFGETVIFQQDNGLDVELVVFGDEFYARYETKDGYTAVYDPERGLYCYAVLLNGRFASSGVPISKHPPSDIRRGLKEAETIRNEKFERRYADLRPPQPGAAANVARTLGPNNGLLEGRRVSEGHIRGLTVLVEFADLTSAVTAADVEAMLNAPNYRENGNFCSVREYYHLMSNGKLDYSNVVVGPIKLSQNQRYYVQNLLCREALDKVVNQLRINLSQFDSCGESIVDALSFMYAGRTVYEGNLWPHNSELNLIYNGIKVRYYTIQSLGRERVDLSIGTFCHESGHLLCRLPDLYDYGSRDGDFEKSAGMGYYCLMSAGNHLNNGHTPAPICGYLRDLVGWCDRQVRLNSPGVYESKQGDYGTLMKYETDRANEYFIIENRTQRGLDAYLPDSGLAVYHCDTLGSNEWQGGTRERHYQCGLLQADGHLDIESNRNQGDSTDLFKRVDGVALSYATTPSTRDWDSSDSGLALADISEPGEVIRLKVGSLVPSNVVTGKVTADLLIPDNKREGISCAIAISQAGKVKSLSVSIDITHTYIGDLQVELQSPSGKKVLLHDRAGGSRRDWQQTYSSSSTPALSVLNGELIAGDWLLNVRDLASRDIGRLNRWNIEIEYESAGQVARGEVSPNLSIPDNTPTGISSAIAIAQSGTLKDISVGVVIPHTYIGDLLVEIVAPSGQSVTLHNISGGSKDNLRMTYDRTSTPALEALIGQPIQGNWSLRVKDLQRLDTGKLEKWSLQLMY
>CP012375.1|AOC52602.1|1866254_1869275_-|High-affnity-carbon-uptake-protein-Hat/HatR
MKRKALVIGVNQYKEGIPCPQHSLKDAEDIAELLRTIGQFDQVQILLNQFEQQDKDHKNPYEPDQLKFLIEQLFNPQDGDTETALFYFSGNGAEIYEAEGKETQKGELLLTDFPNPLNESSSEHTSELRSRSISLKWLHDQLEKSPVKQQIVWLDSDFSNLFIDLFSQTSSEVKYDRCFIAASYDYAGENSTHGVLTDALLSCLNPVIKILITNYTLEDALINTFNWQKNLIKNIGNRILLTGRNVRPQKLWNDLAEGKDLLNLKSEADALADMLLLRDLEPPLAVGILGGWGSGKSFIMNLMQQRMNEIRSASLTKKQTWGKEEEAFPYVGHIYQIKFDAWTYAKADLWYSLTQTIFYEFNRQYTLEQQIEQSLKKVNRSQLEGGKFWKALNAMSEFDRTASLRELANFSEQTYNELEKSKSDQEFSSSLWEKIGDIRKNEKSELQNLKERLRKENRKLRGLILRKMPSYFLQKNWLSLVAFLAGLSIVAFPLLPDQLRDQLPKKLSDVLSTYTTLIQTGGFITALGTGISLLQKTQEEQEKILTGLKQIAGEAKEKFEVGKDVWVTLQQEILQSDRDIEQQVNKIKRHELQIEQLQQQIGLVSNYPTLNTFLEDISKNELYEKKLGYLHQLQRNLAELTNCLHYNPKMKDNDEQFSKLEKTFPRGPARIVLFIDDLDRCPPDRVVEVLEAVQLLVKTPLFIAVVAIDERYVTRALEKYYAGVLFHQGRPSGTDYLEKIIQIPYRIRPVAHSALANYLHQQMEVEESDEETSNVAVSTENISTISVDNSQSNKTDFTENKVGGKLLDSDRDKSVTILTPEKIKFKSEEFKILLECCRHTDLPPRMIKRLVNIYKIFKIIEFLSNKVWLKSNEQTKAILSVLSLSAYYPDLIREVFDDLDIQFEELESQLEGLKQEEKQQQMQKLKLLDSLLKTLESLLNTSEEKDAPHLQREYRRLHHDATILLSGITLAQFDLETFNLVRSFCFFGDVGYSPEDSQRTVRSHQG
>CP012375.1|AOC52601.1|1865508_1866039_+|hypothetical-protein
MRPLAVLAPQQQPTVWNESVAEAGGRTPDHRIVRETVGKYRDKGKANVFEVGEVVGILAKDNPRLKGKNNCWAIVTAVHPRSCDLRLHDGAIDLVKIEYLKELGYTEGDCQTVRRLCERKALATRDRLSRLREREDLEDAALAFLGILGKLQRPYLSALEEEMLTMLEKYYGVVTD
>CP012375.1|AOC52600.1|1864237_1865200_+|Tyrosine-recombinase-XerC
MSATDLTKREDIAPLDNPDVLAQLLAAKRSPRTRHAYAGDLKDFFVFAFGCEEPTPGVTQEFLSLDRFAALSLVLRYKAHLRDERGLAEATRNRRLSAIKSLVRLANQLGQCDFNLSELSGDKVVRYRDTTGVSKEVYRDLLAVPDRSTLKGKRDYAILRLLWDNALRRGEIESADIKDLDTEGRTLAIFGKGRGQQKETVSLSRPTLDALVDWLRERRELDIRQPLFIALDRCSRGHRLTGSAIHKLVAKIAAAAGVNKKMSPHRVRHSGITAALDATGGDVRRVQKLSRHADLNTLMIYDDNRKNVQGEISDLLAGLV
>CP012375.1|AOC52599.1|1863875_1864196_-|Mobile-element-protein
MSAVERGEKKSHVCRTLNISRNTLDIWLKRKKQTGTVAAKTNYRRGPKPQIDDLEAFQKFAEQYGHLTQEKMAQKWANPVSRMRIGQALKRIGFTRKKNLWLQRKR
>CP012375.1|AOC52609.1|1876784_1877906_+|Mobile-element-protein
MRDMEKAYSFRFYPTPEQESLLRRTLGCVRLVYNKALHERTQAWYERQERVGYAQTSSMLTDWKKQEELDFLNEVSCVPLQQGLRHLQTAFTNFFAGRTKYPNFKKKHQGGSAEFTKSAFKFKDRQIYLAKCTEPLPIRWSRQIPESCEPSTVTVRLHPSGRWHISIRFDDPTIQPLPPTDKAIGIDLGISSLVITSDGDKVSNPKHFKKHYQRLRKAQKSLSRKQKGSKNREKARIKVAKIHAKITDNRKDHLHKLTTQLVRENQTIVVENLAVKNMVKNPKLSQAISDVSWGEITRQLAYKCRWYGRNYIEIDRWFPSSKRCSNCGYIAEKMPLNIREWDCPDCGTHHDRDVNASKNILAAGLAVSVCRAT
>CP012375.1|AOC52610.1|1877937_1878480_+|hypothetical-protein
MRKILRERSRNPNREVWESPSVYGGEDVNALTALVIGVYQASSAPLPAGFPTPTPNGRIEVKNYPAYRAATYRYRGQLSEAANRSFYPLYQHISSNDISMTAPVETRYPADTGATSGEAEVFFLYRDTDTYPKEVADNIRIEDVPPMTVVSLGLQGGYDFDSYQQGLTRLNEWRRCIIEI
>CP012375.1|AOC52611.1|1878480_1878882_+|Mobile-element-protein
MEEIKMQCPECKSTHIRKNGINKQGKQNHICVTCGRQFINNYEKQKGYDEKTKRECLTAYVNGMGFRGIERLKGVHHTTVINWVKSVGELLPVAYDPETIPEVGELDELENFVGSKKTKSGCGQPLTTLKKEF
>CP012375.1|AOC52612.1|1879633_1879876_-|serine/threonine-kinase
MHGNVWEWCADTWHDNYDGAPTDGSAWIENGDDNRSPPRGGSWFSIPYLCRSAFRYYCVRRVNDDDLFGFRVVCGAGRTL
>CP012375.1|AOC52613.1|1879829_1881566_-|serine/threonine-kinase
MAKNWVIAIGINEYDNLKPLKYAKKDAEAIKAWCEGEGGFDRSGIFLFTEDSPPIPASPPIPTQPTYGRLKRFLQKQFETPLLKSGDNLWFFFAGHGRRYQDKDYLMLPDSDPGNVRETAVSVDYVTERLRRSGADNVVLLLDACRDEDSRGGLGIGEEEHQGVITFYSCTANQQSWEIDELQQGSFTHTLLEGLRRQGEANCATVERLDEHLRRQVEQTNARYGKPRQNPYLKAEPPHKLYFILLEQVATLRDVQPLKYQASLAENRGDLDLAEQLWIRVLGASRGDLEAIEAIKRIALRQSQSIRQRAIERRRPWSSIPATGREYVTGAEGNRSSTPKPSQETGLKVFNFEIVGVNAKGEQIKKESKQSQYFAQDLGNGITLEMVAIPGGTFTMGTEDEEIERLVKKFNWEGFRKERPQHEVTVPPFFMGKYPITQAQWKAIASLTDLKVEKDLDLNPAHFKDRPDSDRRPVEQVNWDHAIEFCARLSKLTGREYRLPSEAEWEYACRAGTTTPFYFGETITGELANYRSSETYADEPNGEYRQQTTPVGQFSPQCLRTVRYARQCLGMVRRYLAR
>CP012375.1|AOC52614.1|1881558_1881777_-|hypothetical-protein
MDVSKLKLEMQGFLKAMREMLDEADPPSAKIRLDEVELSVEINGEGQVSLFGIGGKAGGKGAMTFKFKRKDG
>CP012375.1|AOC52615.1|1881758_1881890_-|hypothetical-protein
MTLIFKKRPPALEVAVIPGEGLKERKNRPKLRPPKEVKWMCPN
>CP012375.1|AOC52616.1|1881950_1882175_-|hypothetical-protein
MGKPQIAVRIPPSLLAELNQYVERVGTSKTDVIVSAIATYLGCAETVPLSQRIAEVERKIMELESLVKGKRDNI
>CP012375.1|AOC52617.1|1882367_1882505_+|hypothetical-protein
MNKKFSLAQKYSATISALTWDFSIDLPKKNFVTFCHNLLAHHLKL
>CP012375.1|AOC52618.1|1882461_1882695_-|hypothetical-protein
MKLSTNIPDVLYQQIETLANKQNIPVEQLVTMALSAQISSWMTKDYLEEKAQQGSWEKFQQALAKVSDGEPEDYDKM

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Crispr_ID: CP012375_12

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP012375_12

2268337-2268433

TypeV

Consensus_repeat	Method
TCAGTAAACAGTAAACAGTAATCAG	CRISPRCasFinder

1 spacers

cas14k

The CRISPR arrays of CP012375_12

>merge|CP012375|12|2268337-2268433|CRISPRCasFinder
TCAGTAAACAGTAAACAGTAATCAGTAAACAGTAAACAGTAATCAGTGAGACACTGTTGATGGGAGTTTTTTTCAGTGGTCAGTAAACAGTAAACAG

>CP012375|12|12|2268337-2268433|CRISPRCasFinder
TCAGTAAACAGTAAACAGTAATCAG	TAAACAGTAAACAGTAATCAGTGAGACACTGTTGATGGGAGTTTTTT
TCAGTGGTCAGTAAACAGTAAACAG

Protein	Signature genes	Signature genes Name	Protein_function
CP012375.1\|AOC53015.1\|2256559_2260024_-\|adenine-specific-DNA-methyltransferase	unknown	unknown	gnl\|CDD\|227226
CP012375.1\|AOC53010.1\|2248767_2250690_-\|prolyl-oligopeptidase-family-protein	unknown	unknown	gnl\|CDD\|224423
CP012375.1\|AOC53017.1\|2262521_2267126_-\|Ferredoxin-dependent-glutamate-synthase	unknown	unknown	gnl\|CDD\|236968
CP012375.1\|AOC53021.1\|2271630_2271813_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225777
CP012375.1\|AOC53009.1\|2247455_2248412_+\|hypothetical-protein	unknown	unknown	unknown
CP012375.1\|AOC53011.1\|2250987_2252193_-\|2-octaprenyl-6-methoxyphenol-hydroxylase	unknown	unknown	gnl\|CDD\|236001
CP012375.1\|AOC53019.1\|2269638_2270502_-\|Cyanophycinase	unknown	unknown	gnl\|CDD\|131124
CP012375.1\|AOC53014.1\|2256400_2256514_+\|hypothetical-protein	unknown	unknown	unknown
CP012375.1\|AOC53024.1\|2275095_2276670_-\|Hopanoid-2-methyltransferase	unknown	unknown	gnl\|CDD\|379101
CP012375.1\|AOC53027.1\|2279666_2280284_-\|resolvase-like-protein	unknown	unknown	gnl\|CDD\|239738
CP012375.1\|AOC53023.1\|2272762_2275081_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227922
CP012375.1\|AOC53013.1\|2254096_2255950_-\|putative-peptidase	unknown	unknown	gnl\|CDD\|366703
CP012375.1\|AOC53025.1\|2278033_2278162_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379519
CP012375.1\|AOC53022.1\|2271984_2272761_-\|sterol-desaturase-family-protein	unknown	unknown	gnl\|CDD\|225546
CP012375.1\|AOC53028.1\|2280360_2281209_-\|transglutaminase-domain-protein	unknown	unknown	gnl\|CDD\|224224
CP012375.1\|AOC53026.1\|2278456_2279695_-\|Mobile-element-protein	cas14k	-	gnl\|CDD\|223747
CP012375.1\|AOC53016.1\|2260265_2262452_-\|Modification-methylase-DsaV	unknown	unknown	gnl\|CDD\|365904
CP012375.1\|AOC53020.1\|2270861_2271341_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|283241
CP012375.1\|AOC53012.1\|2252400_2253243_+\|gamma-tocopherol-methyltransferase	unknown	unknown	gnl\|CDD\|215135
CP012375.1\|AOC53018.1\|2267426_2268284_-\|Succinyl-CoA-ligase-[ADP-forming]-alpha-chain	unknown	unknown	gnl\|CDD\|223152

Protein	Function_ID	Function_description	E-value
CP012375.1\|AOC53015.1\|2256559_2260024_-\|adenine-specific-DNA-methyltransferase	gnl\|CDD\|227226	COG4889, COG4889, Predicted helicase [General function prediction only].	2.67676e-25
CP012375.1\|AOC53010.1\|2248767_2250690_-\|prolyl-oligopeptidase-family-protein	gnl\|CDD\|224423	COG1506, DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism].	3.33229e-76
CP012375.1\|AOC53021.1\|2271630_2271813_-\|hypothetical-protein	gnl\|CDD\|225777	COG3237, COG3237, Uncharacterized protein conserved in bacteria [Function unknown].	4.92518e-08
CP012375.1\|AOC53025.1\|2278033_2278162_-\|hypothetical-protein	gnl\|CDD\|379519	pfam14239, RRXRR, RRXRR protein. This domain is found in bacteria, eukaryotes and viruses, and is approximately 180 amino acids in length. It contains a conserved RRXRR motif. It is often found in association with pfam01844.	1.75888e-12
CP012375.1\|AOC53011.1\|2250987_2252193_-\|2-octaprenyl-6-methoxyphenol-hydroxylase	gnl\|CDD\|236001	PRK07364, PRK07364, FAD-dependent hydroxylase.	0
CP012375.1\|AOC53019.1\|2269638_2270502_-\|Cyanophycinase	gnl\|CDD\|131124	TIGR02069, cyanophycinase, cyanophycinase. This model describes both cytosolic and extracellular cyanophycinases. The former are part of a system in many Cyanobacteria and a few other species of generating and later utilizing a storage polymer for nitrogen, carbon, and energy, called cyanophycin. The latter are found in species such as Pseudomonas anguilliseptica that can use external cyanophycin. The polymer has a backbone of L-aspartic acid, with most Asp side chain carboxyl groups attached to L-arginine. [Energy metabolism, Other].	8.78936e-112
CP012375.1\|AOC53024.1\|2275095_2276670_-\|Hopanoid-2-methyltransferase	gnl\|CDD\|379101	pfam13282, DUF4070, Domain of unknown function (DUF4070). This is a bacterial domain often found at the C-terminus of Radical_SAM methylases.	6.19947e-63
CP012375.1\|AOC53028.1\|2280360_2281209_-\|transglutaminase-domain-protein	gnl\|CDD\|224224	COG1305, COG1305, Transglutaminase-like enzymes, putative cysteine proteases [Amino acid transport and metabolism].	2.19302e-31
CP012375.1\|AOC53023.1\|2272762_2275081_-\|hypothetical-protein	gnl\|CDD\|227922	COG5635, COG5635, Predicted NTPase (NACHT family) [Signal transduction mechanisms].	4.35569e-177
CP012375.1\|AOC53013.1\|2254096_2255950_-\|putative-peptidase	gnl\|CDD\|366703	pfam01551, Peptidase_M23, Peptidase family M23. Members of this family are zinc metallopeptidases with a range of specificities. The peptidase family M23 is included in this family, these are Gly-Gly endopeptidases. Peptidase family M23 are also endopeptidases. This family also includes some bacterial lipoproteins for which no proteolytic activity has been demonstrated. This family also includes leukocyte cell-derived chemotaxin 2 (LECT2) proteins. LECT2 is a liver-specific protein which is thought to be linked to hepatocyte growth although the exact function of this protein is unknown.	1.33833e-49
CP012375.1\|AOC53027.1\|2279666_2280284_-\|resolvase-like-protein	gnl\|CDD\|239738	cd03769, SR_IS607_transposase_like, Serine Recombinase (SR) family, IS607-like transposase subfamily, catalytic domain; members contain a DNA binding domain with homology to MerR/SoxR located N-terminal to the catalytic domain. Serine recombinases catalyze site-specific recombination of DNA molecules by a concerted, four-strand cleavage and rejoining mechanism which involves a transient phosphoserine linkage between DNA and the enzyme. They are functionally versatile and include resolvases, invertases, integrases, and transposases. This subfamily is composed of proteins that catalyze the transposition of insertion sequence (IS) elements such as IS607 from Helicobacter and IS1535 from Mycobacterium, and similar proteins from other bacteria and several archaeal species. IS elements are DNA segments that move to new sites in prokaryotic and eukaryotic genomes causing insertion mutations and gene rearrangements.	2.60057e-42
CP012375.1\|AOC53022.1\|2271984_2272761_-\|sterol-desaturase-family-protein	gnl\|CDD\|225546	COG3000, ERG3, Sterol desaturase [Lipid metabolism].	4.58931e-35
CP012375.1\|AOC53026.1\|2278456_2279695_-\|Mobile-element-protein	gnl\|CDD\|223747	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	1.70413e-24
CP012375.1\|AOC53020.1\|2270861_2271341_-\|hypothetical-protein	gnl\|CDD\|283241	pfam05532, CsbD, CsbD-like. CsbD is a bacterial general stress response protein. It's expression is mediated by sigma-B, an alternative sigma factor. The role of CsbD in stress response is unclear.	3.20648e-09
CP012375.1\|AOC53017.1\|2262521_2267126_-\|Ferredoxin-dependent-glutamate-synthase	gnl\|CDD\|236968	PRK11750, gltB, glutamate synthase subunit alpha; Provisional.	0
CP012375.1\|AOC53016.1\|2260265_2262452_-\|Modification-methylase-DsaV	gnl\|CDD\|365904	pfam00145, DNA_methylase, C-5 cytosine-specific DNA methylase.	3.24182e-95
CP012375.1\|AOC53012.1\|2252400_2253243_+\|gamma-tocopherol-methyltransferase	gnl\|CDD\|215135	PLN02244, PLN02244, tocopherol O-methyltransferase.	3.28671e-126
CP012375.1\|AOC53018.1\|2267426_2268284_-\|Succinyl-CoA-ligase-[ADP-forming]-alpha-chain	gnl\|CDD\|223152	COG0074, SucD, Succinyl-CoA synthetase, alpha subunit [Energy production and conversion].	2.63794e-76

>CP012375.1|AOC53018.1|2267426_2268284_-|Succinyl-CoA-ligase-[ADP-forming]-alpha-chain
MQGIDRPLGKYYAARLKAQGTCLVAGVASGHGGEIIAEIPVFDLVAEAVAEAGEIKTSLILVPPNQVLDAALEAIAAAITQLIIVTPGVPPLDLVELLKIASTTGTLILGPGSQGVIIPNYLWLGICEPSFYQSGTIGLITRGDRIGDEVAKTLTAAGYGESMAVNLGTDGIIGSNLSQWLQVFEEDENTEAILLVSQVGGKSEIEAAKYIASAIEKPVIAYLVGLNTAIETNFGDTETIISNQLSYSVAAKNTRKDSLRHFQEAGVTVVEKLADLPTSLAKVLS
>CP012375.1|AOC53017.1|2262521_2267126_-|Ferredoxin-dependent-glutamate-synthase
MAQQNNLKTDNIHQIDPYWGPRWLVEERDACGVGFIADVRGSGSHQLIEQALLALGCLEHRGGCSADQDSGDGSGMMTAIPRDVLAPWFAENGLNMPESERLGVGMVFLPQADRERAEAKAHIEEIVNKYNIKILGWRAVPVHPQVLGRQARENQPYVEQILVTSPDLAGSQFDRLLYIARSEVGKQLADDFYFCSFSCRTIVYKGMVRGEILREFYLDLQNPAYSSQFAIYHRRFSTNTQPKWPLAQPMRLLGHNGEINTLLGNINWMSAREPALETQGWTHEELQSLTPIVNPANSDSYNLDSALELLVRTGRSPLEAAMILVPEAYNNQPDLQDYPEIIDFYEYYSGLQEPWDGPALLVFSDGGIVGACLDRNGLRPARYSITNNGYIVVSSEAGTIPLDETTIMEKGRLGPGQMLAVDLEKGEIKRNWQIKQEIARANPYGEWVKSQRTLIDKETAIDIPAPSHLLPLQTAFGYTAEDVDMIIVPMAEQGKEPTFCMGDDTPLAVLSSKPHLLYDYFKQRFAQVTNPPIDPLRESLVMSLTMYLGRRGNILKLGVDDAHLLKLDSPLLNNAELAKVKTSSYKTAELSTLYDLTTGPGGLEYAIANLCAEAAKKVASGAEILILSDRTASIDEKTSYIPPLLAVGAVHHHLIRSHLRLKASIVIDTAQCWSTHHFACLIGYGASAVCPYLSLETIAQWWIEPKTQKLMENGKLEAISLEKALINYRKSVEAGLLKILSKMGISLLSSYHGAQIFEAIGLSADLVKLAFNGTTSRVGGLSIAEVAQEAIAFHSKAFPNLTAKKLENYGFVNYRPGGEYHMNSPEMAKALHKAVAAHSQGEGYDHYETYRQILQERPVTALRDLLEFNSDRASIPLEAVESIESILQRFCTGGMSLGALGREAHETLAIAMNRIGGKSNSGEGGEDPIRYTSLSDVDAEGHSVTMPHLNGLKNGDTANSAIKQIASGRFGVTPEYLMSGKQLEIKMAQGAKPGEGGQLPGKKVSPYIAMLRRSKPGVTLISPPPHHDIYSIEDLAQLIYDLHQINPRAKVSVKLVAEIGIGTIAAGVAKANADIIQISGHDGGTGASPLSSIKHAGSPWELGVTEVHRMLMENQLRHRVILRADGGLKTGWDILMAAVMGAEEFGFGSISMIAEGCIMARVCHTNNCPVGVATQQERLRARFPGIPAHVVNFFTLVAEETRQLLAKLGYHSLNEVIGRADLLKVRSDARLTKTESLNLDCLLNLPDGRGDRSWLQHEEVHSNGAVLDDDILADSEIKQAIEQQGTVSKTYRIVNTDRSVGARIAGVIAQKYGNDGFEGEIKLNFQGAAGQSFGAFNLPGVNLHLEGEANDYVGKGIYGGEIVILPPQNANYQPEDNAIIGNTCLYGATGGVLYANGRAGERFAVRNSTAKAVIEGAGDHLCEYMTGGVIVVLGSVGRNVGAGMTGGLAYILDPSLPEKLNPEIVKIQRVATAAGAEQLKSLIEAHVERTNSPKGKLILANWDSYLGQFWQVVPPSEADSPEAQISAEKTLTSV
>CP012375.1|AOC53016.1|2260265_2262452_-|Modification-methylase-DsaV
MTNEKLRFIDLFAGIGGFRLAFESVGYDCVYSCEIDENCRKVYFNNFQEIPDQDIRKIAIHDLPDFEVLTAGFPCQPFSISGKRAGFRDTRGTLFFHICEIVELKKPKIILLENVKHLIHLDKGKNLDIILHSLEELGYLVDYKLLNAKDFGVPQNRERIIIIATQNKKFNFNSLKYTSPIPKLRDFLSPQGNFEYLDKKEYTLIDNPTLQPSGLIFVGYRNKTIWKKGIRPNTEHLSRVHHQPNRIYSIDGVHPTIPSQETSGRFFIYIPEQDQVRKLTIQECYRLMKFPDSFQIHPNLAESYKQVGNSVCIPMIQELAIAIKKHIFENNSRVSLKEFSFSRQNIQLEIIGLDFMNHKEKLLDIYDQSLNLDDRQPLLPQPYQNYIQQIATNCSKKKGVYTVLITLLVHKILYPNQDIRYHQTNLPGGFSGRTIDTQYITPTLKQLGLPAMAESGWLTRSLEQPFPYTLDYQGKISNQKTKDAFLGLIDFIETNPQQAEVILTLLLHQVNQIIQTQKIKILKIDNPEPFDINTLSSCLENHFSFNYQTRGASKLPVLALYAIYQRLIIEVERYKSCTLKPLGSHTASDLTSGSAGDIEIFDKNKQLVEVIEIKHGKYIDLQILRIAKDKIIKFNPRRYYILSSFDVKPTEVELIMSEIQTIKNNHGCQIITNGIIPTIKYYLRLISSPEEFVNSYSHLIEIDSELQTIHKLKWNEILSNLISPIEQI
>CP012375.1|AOC53015.1|2256559_2260024_-|adenine-specific-DNA-methyltransferase
MNPLVNYFRNLQEIHSSQAAVKETSYYGTLETLLNEIGKTLKPRVRCIINLRNQGAGLPDGGLFNVDQFPKNQELEPFTAIFPERGAIEIKGTKEDIKKIAASEQVQKYWQKYGQVLVSNYRDFLLIGRNSQGQPVELEAYSLAPSEAEFWLKTSNPSKFAAEHGDSLLEYLKRVLLQAAPITSPADVAWFLASYARDAKARLEHHSDLPALANIRQALENALGIKFEREQGNKFFRSTLVQTLFYGLFSAWVLWHKQNLNREDKEDKFDWKSAAHHLHVPMLAILFEQIAAPSKLKSLGLVEVLNWTGAALNRVRREEFFRQFDEGQAVQYFYEPFLQAFDPDLRKELGVWYTPPEIVRYMVARVDRVLREELNIEDGLANPDVYILDPCCGTGAYLVEVLRYITDTLQENGAGALAMALVKKAAIERIFGFEILTAPFVVAHLQLGLFLQSLGVPLIEDSERVGIYLTNALTGWQPPDEESKQKIQQLQLSFPELNKEREAADEVKRGKPILVILGNPPYNAFAGTSPAEEAGLVELYKQGLISDWGIKKFNLDELYVRFFRLAERCISENTGKGVVCYISNFSYLGDPSFVVMRQRFLQEFDRLWFDCLNGDSRETGKLTPEGNPDPSVFSTQYNKEGIRVGTTIGLMVRKEVRNKNVDVYFRHFWGVAKREQLLDSLNNQDFDSLYQVSNPEQSNRYSFRPSDVSSHYLAWPKLTDLSDEAPITGYKENRGYSFIDSDKTILSERISKYFDQNVSWEELASLNTGLTKDAARFDAKKARDKVLKLREKFNPQMLLPYLLRPYEVKWCYYTQIRPLWNESRPSLFIHQFQGNSFLVSRPAGVASPEGIPFYFTNCLGDFDFIRGHAYHFPIRLRQNSEKVKTEDNTQGKLFDSSNLNIPSIKANLSEKSRQYLNELGINNLDENIENASLIWLHSLAIGYSPLYLGENADGIRQDFPRIPLPNSQELLIKSAELGQVIASLLDTEKPVIGVTKKPTPALQKIALISCTDGGNLNPDKGDLIINVGWGHGGKNGVTMPGKGKAIARQYTTAEMSVISPEMRKLLGTTTYDIYLNDRAYWQNIPVRVWEYTIGGYQVIKKWLSYREEKLLGRGLTIAEVQEVSEMTRRITAIILLESDLDDNYQNIKTAVYSF
>CP012375.1|AOC53014.1|2256400_2256514_+|hypothetical-protein
MWGFTDFQVVNYLIFREKVKISPRSLQWLAFFDLKKV
>CP012375.1|AOC53013.1|2254096_2255950_-|putative-peptidase
MKETFIHNTMTSATPEQNYTAESNRVRYSVALLGLALSLGVPSILNSTSESAQAANSVPLEWELIDLSPKAKDGGKELKEPQIIPSQALATVKFIATSVVEHQVKPGESLWSLADTYQTTPTAIATRNNLSPHSDLIIGQTLKIPTPEQLPPAAPAATPEQLDSSSASLRQTRQRLQESLAALRTEETPHQSHSGETVIVTETTALVPDNSPTSVEIPVIAPEESPQPTSQVIPIPVPTPESDRPIATIPLNPPLTSRPEIPSVALRNPAPVTEIPAVPNPRVIVPPENQVYRVRPGDTLNTIARALGITPAELARENGIDNPNRIKVNQTLVVPDRSANARVNQNLTPLVGERPRLSFNPSNRQNPPAETVTTETEEFPENITGSYRERLRQEVANLRETNLSETQKSIAIPVDNPPETVEDRQITANPQWTALRSRSNQSNPPQIIGSAPTNVEEYNDRLRIPVGETVEPSLPPLANPDEHLPNPAPIFTGFIWPTRGVLTSGFGWRWGRPHRGIDIAGPVGTPVVAAAAGEVISSGWNSGGYGNLVKLRHPDGSVTLYAHNSRLLVRRGQTVEQGEPIAQMGSTGFSTGPHLHFEVHPSGQGAVNPMAFLPGRR
>CP012375.1|AOC53012.1|2252400_2253243_+|gamma-tocopherol-methyltransferase
MELYQRIADFYDSSSGLWERIWGEHMHHGYYGRSGKIKLDRRQAQIDLIEELLTWGAVTGANQILDVGCGIGGSSLYLAEKFHSQAVGITLSPVQAARASQRAQEFNLEEQVSFCVADALKTPFPDDNFDLVWSLESGEHMPDKRQFLRECYRVLQPGGTFLMATWCHRPTTSLAGNLTEGEIKLLNEIYQVYCLPYVISLPEYADIARDIGFRDLKTDDWSLSVAAFWDVVIDSALSTDAIAGLLASGYTTIQGALSLGLMRRGYESGLIRFGLLQGKK
>CP012375.1|AOC53011.1|2250987_2252193_-|2-octaprenyl-6-methoxyphenol-hydroxylase
MLGRDSYDLIIVGGGIVGTTLAVALKNTGLNIAMIEERPLEVAASRRQAYALSLMSSRIFTGLGIWDKISSSIGKFRHIRLSDADFPIFVPFVVDELKTDYLGYVGEHQVILTALHKASQDCDRIDWLSPAKVLEVEYGAETATVTLEEAGQTRKITTKLVIGADGARSAIRQGAQIKTKGWKYWQSCVAFTIKHQLDRNDTAFERFWPTGPMGILPLQGNRCQIVWTNPHGEAKKLQEMPEGEFLDKLEAYTGGLLGKLELVSSRALFPVQLMQSDTYVKPRLALIGDAAHCCHPVGGQGLNLGIRDAAALAQVLKEAVEKQEDIGALSTLKSYEKWRRSENLAILGFTDFLDRLFSNNWPPIVVIRRLGLAMMRGFPPLKLFALQLMTGLKGRIPQLAR
>CP012375.1|AOC53010.1|2248767_2250690_-|prolyl-oligopeptidase-family-protein
MSHQISAYGSWKSPITSDLIVAASISLGGVTLDGEDIYWLEGRPQEKGRNVLVKLNPDGTTTEITPAPFNVRTRVHEYGGGSYLIVAGIIYFCNFADQRIYRQTAESLPQPLTPENSCRYADLILDEFRNRLICVCEDHSQKDREPVNSIVSIDVDTGEIKTLVSGDDFYTSPRLTADGSRLAWISWNHPNMPWDSSFLWVADINNLYLSNIRVIAGGENESVCEPRWSADQQLYFTSDRNDFWNFYCFNHDEQIEQVLEPIEAEFAYPHWVFGLSNYGFAGESQIICSYTKDGRCYLGSIDTVNREFREIIIADTNISSLQVSDNKIVFIGGSFREVTAVISMDLATGTREVLKSSSNLTISSDYFSIPEMLAFPTSQGLTAFAWYYPPKNPDYTAPNGELPPLLVKSHGGPTAAATSSLSLRVQYWTSRGFGYLDVNYGGSTGYGRQYRQRLLGNWGIVDVEDCINGAKYLVNQGLVDGERLAISGGSAGGYTTLAALTFHDTFKAGASYYGVSDLEVLATDTHKFESRYLDKLVGRYPEEKEIYYQRSPIHFTAQLSCPVIFFQGLEDRVVPPNQAEMMVEALKAKGLPVAYVPFAGEQHGFRQAESIKRALDAEFYFYSRLFGFTPADNLEPVEIK
>CP012375.1|AOC53009.1|2247455_2248412_+|hypothetical-protein
MLFSALVILYLTIFSIYDAFWKSYIQQNLLIYSTDGLMGNVNQLSFFRKINIFLGMLRRVQDTQILFLLTAIVLILGVPFLILKRVSLSQNQEKYQTFCFVYYSLFIWAASSYSIIRPGNGFTHYLLFLIIPSGFLIGVFIGELAQVLQVSKLTRSNLNFSLLTGVIFITVASSFLQFATTITSDNVYLNNRRRFARNYLSPIAKTILKYASPGESMAVWGWASELYVDTGLVPAIRDSVSLWQIKPGSLQEYFLQRYAEDFINSNAKLFVDAVAPRMFFFTDRQTQGHEVFPEIARVINENYRLVDEVQGVRIYLKK
>CP012375.1|AOC53019.1|2269638_2270502_-|Cyanophycinase
MESTKERGQLIIIGGAEDKEGDCQILREFVRCAGGTKAKIAVLTAATSEPRSAGEAYTRVFERLGVEDVRVLDTIHREDADDPENLKIIEEATGAFFTGGDQALIIEHIKGTQLDTLLHQRNREGMVVGGTSAGAAIMPDLMIIEGDSETNPRMDAIDMGPGMGFLHSVVIDQHFAQRGRLGRLISALLQQPANLGFGIDEDTAVIVDGDEFKVVGRGAITVVDESEATYDNLDELLKDEAMAVCGVRLHILPQGFRFNLKTRKPVFSRSIELKDSNPKKEAEVERE
>CP012375.1|AOC53020.1|2270861_2271341_-|hypothetical-protein
MMSLQQIRRFFVTIILTIMLAITIAFDFGTTNSWAATLPTQPQTQIASMNRAKAVTKNIEGKAQEAIGNMTGDPKDQMMGKAKQVESQARNAAEDIKDQMKLKGRAKAVTKNIEGKAQEAIGKATGNRQDQVAGKAKQVESQVRNAVEDVKDQVQDILN
>CP012375.1|AOC53021.1|2271630_2271813_-|hypothetical-protein
MSLKDRTEATAKNIEGKVQEAVGDLTGDPKAQAEGKEKQAEAKVRHTIEDVKDEVKKIID
>CP012375.1|AOC53022.1|2271984_2272761_-|sterol-desaturase-family-protein
MIDHSFGFYGFAFFGIILARYFLVAGGTYLFFYSPLSQSFVNHNLRHWSPSWRSIQQDITLSVFSAGVFALAAAFIMTGYSWGITRLYSHPQQYGLCYLGVSYGAVLVLQDAYFYFTHRLFHHPSLFRWLHQGHHRSRYPTPWTSFAFDPLEAIVQSLFLVGIVFVLPLHFITLIAALTTMTIWAVLNHLGIDRLPSSFPHHWLGRWFIGPAHHSIHHRKYTVHYGLYFTFWDKLLGTQDPDYEQKFDERLTGKVDGV
>CP012375.1|AOC53023.1|2272762_2275081_-|hypothetical-protein
MDCMVKRSLQASPSGIKQAKRAFALTGWTQENLAGEVNLKTRQPIWRFFTGKPVDRQVFLEICSILDLDWREIALAPPAEFPEPGELAKTNIDALVQEVRAQRLDTIQNQCGILQLLDISHPVNIDDIYVDVNILAEIASQQWVEIADWQNLGPAEFDRVGLGEVEQKQIPGMQAVETYSKLRVLGRPGVGKTTFLQHLAIQCNQGEFAANQVPIFILLREFAEESRPSGEFSLFNYIRQALLTSGISNPSVLETLLQAGRVLLLLDGMDEVLNQDITAVLREIRQFSEKYHRNRFVVTCRTAAQKLQIRGFTDVEIAPFTQAQISTFAQKWFVALSKTTAQAGQEQSAQFMEKLDLPENWQFRQLVVTPLFLHLACWVFQGQGKFPSKRAEFYKQGLDLLLGKWDEARGVERDQVYRGFLLPQKLRLLSQLAAVTFEQGQYFFEQRTIEQYIGDYLRNLPGATLEAEELQLESEAMLKAIEAQHGILTERARGIFSFSYLAFQEYFTARKIVASHNLQALEQALGGLVSHITDSHWREVFLLTAAMLRSADALVLLMKQQIDALVAQDSYLQEFLSWASQKSQQLPDETKVATARAFYLALAQSPHTADRFALASTLDQGMLLDAALENLLVEFAIDHSQDFAYVNACSEALNNILVMVLDAGFYKSLQQLRDQLPPPSQNLERLQHWWQKNYSAWVEQLRVAIANYRNIHHPWQFTTEQQQLLQRYYEANQLLIDCLNSNCEITAAIRQDIEATLLLPQKDLEDREWQGD
>CP012375.1|AOC53024.1|2275095_2276670_-|Hopanoid-2-methyltransferase
MKALLLYPEFPQSFWSYDRFMEIAGLKATIPPLGIITVAALLPQNWEIRFYDRNVNPETEADWEWCELVILSAMLVQKPDFQALIQKAVQLGKKVAVGGPYPTSVPQDALDSGANYLILDEGELTVPLFLEAIAQGQSRGIFRSGDKPDVTLSPIPRFDLLQRDDYLMMAVQFSRGCPFNCEFCDIISLYGRKSRTKEPSQTLAELQTLYDLGWRGSLFIVDDNFIGNQRNVKRFLRDLIPWMKQHDYPFTFITEASVNLAEDDELLSLMAEAGFYSVFLGIETPDQDSLQVTRKLQNTRNPLVEACRKINAAGLLIYAGFILGFDGERSGAGERIQAFVEETSIPQPMLGILQAPPNTALWNRLQQEQRLVEGDSIHPTGDQNSLMNFIPTRPIAEIAKEYVEGFWTLYEPSHYLRRCFQQCLGLGLQSKHKQTMQFPVGKGLRLITQLIWHQGIRRGDIRGQFWRQLWTIWQKKPQVLNLYLGLCAAGEHFWEYRALARERITQQLGYDPLEVSGRPNQNSF
>CP012375.1|AOC53025.1|2278033_2278162_-|hypothetical-protein
MARVPVISKDGKPLMPTKPSRARRWIKEGKAIGKFNDLDRAG
>CP012375.1|AOC53026.1|2278456_2279695_-|Mobile-element-protein
MKLVQKHLIKFNHKNYSVIDKLGFLSKNLYNCAVYLNRQVFFSHQPFLTMTELHHALKMSPDYQALPAKVSQLVLKQVEKTFKSYQKAKEQYKKSPDKFTGEPKLPRYKDKEKGRNVLTYNYQAISKKALKQGLIKLSGTNLEFKTNLKEVLEVRIIPKLGAYCLEIVYEQPSSSSQEGERYAFIDLGLNNLAAVTSNIPEFQPTLVCGKALKSCNQKYNKTLAKLKSELPSLQKTSKRIQGLTLKRNCKVDYYLHTASKYIIDKLLAHQINLLVIGHNQGWKQNINIGDRNNQSFVNIPHSRLIEQLTYKANLVGIEVKTTNESYTSKCSFLDLESIQKQKSYLGKRIKRGLFRSSSGYFYGADINGSLNIGRKVVGEAAFSGNPIERFVVNPVRVKAYKANSRCNICVQN
>CP012375.1|AOC53027.1|2279666_2280284_-|resolvase-like-protein
MQVYIAVHIKLSDYAKKKGISYDTAWRMWNRGQLQGERLPTGTIIIFEDDRSCGENKVAIYARVSSSENQSNLETQAKRLEAYCIAKGYQIVRVVKEVGSGVNDHRKLLLKLLEQTDYNLIVVEHKDRLSRVGFNYLKVLLNQTNRDIEVVNLAEERKDDLMEDFVSIITSFCARLYSLRRRNRKTECLIKCLEENDEISSKTSN
>CP012375.1|AOC53028.1|2280360_2281209_-|transglutaminase-domain-protein
MLKYELGCELTYSIEQASTLILNVAIVSNNHQIIVQEDLHSNSQRSIEEYITSVSGNRYFRLNAPPGNLQISYRATVGLSPYYSDPSTIFEVKPADLPLDILYYLYPSRYCQSDRLLRFVAAEFGHLVPGYSRVTAICNWIYDNVLYLSGSSDSLTSACDTAIERVGVCRDFAHLGIAFCRALNIPARFVSGYAYGLNPPDFHAWFEAYLGGRWYLFDPTRLVPQSGLIRVGTGRDAADVSFATIFGQVQMNQMRLFMDYLPDAKPISENILIPTTEAIAIS

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Crispr_ID: CP012375_13

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP012375_13

2455384-2455498

Orphan

Consensus_repeat	Method
GGGAGAGGGAGTTTGAGCATTTGTACTAAAATT	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP012375_13

>merge|CP012375|13|2455384-2455498|CRISPRCasFinder
GGGAGAGGGAGTTTGAGCATTTGTACTAAAATTCCCAATAGCCAGTTTAAAGACAGTACAGCTTGAGATGAATTATGAAGTGGGGAGAGGGAGTTTGAGCATTTGTACTAAAATT

>CP012375|13|13|2455384-2455498|CRISPRCasFinder
GGGAGAGGGAGTTTGAGCATTTGTACTAAAATT	CCCAATAGCCAGTTTAAAGACAGTACAGCTTGAGATGAATTATGAAGTG
GGGAGAGGGAGTTTGAGCATTTGTACTAAAATT

Protein	Signature genes	Signature genes Name	Protein_function
CP012375.1\|AOC53202.1\|2446807_2447545_+\|Branched-chain-amino-acid-transport-ATP-binding-protein-LivF	unknown	unknown	gnl\|CDD\|223487
CP012375.1\|AOC53210.1\|2458423_2458546_-\|hypothetical-protein	unknown	unknown	unknown
CP012375.1\|AOC53214.1\|2459854_2460985_-\|Low-affinity-CO2-hydration-protein-CphX	unknown	unknown	gnl\|CDD\|370890
CP012375.1\|AOC53216.1\|2461560_2462454_+\|Permease-of-the-drug/metabolite-transporter-(DMT)-superfamily	unknown	unknown	gnl\|CDD\|273359
CP012375.1\|AOC53203.1\|2447725_2447923_-\|Mobile-element-protein	unknown	unknown	unknown
CP012375.1\|AOC53215.1\|2461016_2461373_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|370156
CP012375.1\|AOC53199.1\|2443178_2444396_-\|Tyrosyl-tRNA-synthetase	unknown	unknown	gnl\|CDD\|235645
CP012375.1\|AOC53205.1\|2448669_2448918_+\|transposase	unknown	unknown	gnl\|CDD\|315923
CP012375.1\|AOC53207.1\|2455644_2456562_-\|Glycosyl-transferase,-family-2	unknown	unknown	gnl\|CDD\|133005
CP012375.1\|AOC53211.1\|2458597_2458720_+\|oxalate/formate-antiporter-(OxlT-2)	unknown	unknown	unknown
CP012375.1\|AOC53209.1\|2457827_2458427_+\|Alkyl-hydroperoxide-reductase-subunit-C-like-protein	unknown	unknown	gnl\|CDD\|239313
CP012375.1\|AOC53197.1\|2439457_2442703_-\|Carbamoyl-phosphate-synthase-large-chain	unknown	unknown	gnl\|CDD\|235393
CP012375.1\|AOC53206.1\|2454318_2455344_+\|Oligopeptide-transport-system-permease-protein-OppB	unknown	unknown	gnl\|CDD\|223674
CP012375.1\|AOC53212.1\|2458982_2459234_-\|hypothetical-protein	unknown	unknown	unknown
CP012375.1\|AOC53200.1\|2444592_2446278_+\|glycosyl-transferase,-family-2	unknown	unknown	gnl\|CDD\|133055
CP012375.1\|AOC53213.1\|2459237_2459801_-\|serine/threonine-kinase	unknown	unknown	gnl\|CDD\|319862
CP012375.1\|AOC53208.1\|2456826_2457621_+\|Tryptophan-synthase-alpha-chain	unknown	unknown	gnl\|CDD\|237285
CP012375.1\|AOC53198.1\|2442925_2443162_+\|Ferredoxin-thioredoxin-reductase,-variable-chain	unknown	unknown	gnl\|CDD\|367263
CP012375.1\|AOC53201.1\|2446346_2446598_+\|4Fe-4S-ferredoxin,-iron-sulfur-binding	unknown	unknown	gnl\|CDD\|224069
CP012375.1\|AOC53204.1\|2448046_2448487_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|279973

Protein	Function_ID	Function_description	E-value
CP012375.1\|AOC53202.1\|2446807_2447545_+\|Branched-chain-amino-acid-transport-ATP-binding-protein-LivF	gnl\|CDD\|223487	COG0410, LivF, ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism].	2.87538e-117
CP012375.1\|AOC53216.1\|2461560_2462454_+\|Permease-of-the-drug/metabolite-transporter-(DMT)-superfamily	gnl\|CDD\|273359	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter. [Transport and binding proteins, Amino acids, peptides and amines].	1.89319e-11
CP012375.1\|AOC53214.1\|2459854_2460985_-\|Low-affinity-CO2-hydration-protein-CphX	gnl\|CDD\|370890	pfam10216, ChpXY, CO2 hydration protein (ChpXY). This small family of proteins includes paralogues ChpX and ChpY in Synechococcus sp. PCC7942 and other cyanobacteria, associated with distinct NAD(P)H dehydrogenase complexes. These proteins collectively enable light-dependent CO2 hydration and CO2 uptake; loss of both blocks growth at low CO2 concentrations.	0
CP012375.1\|AOC53215.1\|2461016_2461373_-\|hypothetical-protein	gnl\|CDD\|370156	pfam08853, DUF1823, Domain of unknown function (DUF1823). This presumed domain is functionally uncharacterized.	1.02417e-74
CP012375.1\|AOC53199.1\|2443178_2444396_-\|Tyrosyl-tRNA-synthetase	gnl\|CDD\|235645	PRK05912, PRK05912, tyrosyl-tRNA synthetase; Validated.	0
CP012375.1\|AOC53205.1\|2448669_2448918_+\|transposase	gnl\|CDD\|315923	pfam13358, DDE_3, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	9.24845e-16
CP012375.1\|AOC53207.1\|2455644_2456562_-\|Glycosyl-transferase,-family-2	gnl\|CDD\|133005	cd02511, Beta4Glucosyltransferase, UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide. UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.	2.16824e-71
CP012375.1\|AOC53209.1\|2457827_2458427_+\|Alkyl-hydroperoxide-reductase-subunit-C-like-protein	gnl\|CDD\|239313	cd03015, PRX_Typ2cys, Peroxiredoxin (PRX) family, Typical 2-Cys PRX subfamily; PRXs are thiol-specific antioxidant (TSA) proteins, which confer a protective role in cells through its peroxidase activity by reducing hydrogen peroxide, peroxynitrite, and organic hydroperoxides. The functional unit of typical 2-cys PRX is a homodimer. A unique intermolecular redox-active disulfide center is utilized for its activity. Upon reaction with peroxides, its peroxidatic cysteine is oxidized into a sulfenic acid intermediate which is resolved by bonding with the resolving cysteine from the other subunit of the homodimer. This intermolecular disulfide bond is then reduced by thioredoxin, tryparedoxin or AhpF. Typical 2-cys PRXs, like 1-cys PRXs, form decamers which are stabilized by reduction of the active site cysteine. Typical 2-cys PRX interacts through beta strands at one edge of the monomer (B-type interface) to form the functional homodimer, and uses an A-type interface (similar to the dimeric interface in atypical 2-cys PRX and PRX5) at the opposite end of the monomer to form the stable decameric (pentamer of dimers) structure.	6.62113e-112
CP012375.1\|AOC53197.1\|2439457_2442703_-\|Carbamoyl-phosphate-synthase-large-chain	gnl\|CDD\|235393	PRK05294, carB, carbamoyl-phosphate synthase large subunit.	0
CP012375.1\|AOC53206.1\|2454318_2455344_+\|Oligopeptide-transport-system-permease-protein-OppB	gnl\|CDD\|223674	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	1.13642e-108
CP012375.1\|AOC53200.1\|2444592_2446278_+\|glycosyl-transferase,-family-2	gnl\|CDD\|133055	cd06433, GT_2_WfgS_like, WfgS and WfeV are involved in O-antigen biosynthesis. Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.	8.01863e-29
CP012375.1\|AOC53213.1\|2459237_2459801_-\|serine/threonine-kinase	gnl\|CDD\|319862	cd16383, GUN4, porphyrin-binding protein domain GUN4. GUN4 is a porphyrin-binding protein involved in chlorophyll biosynthesis regulation and intracellular signaling, found in aerobic photosynthetic organisms. It has been implicated in retrograde signalling between the chloroplast and nucleus. GUN4 can bind protoporphyrin IX (PIX) and magnesium protoporphyrin IX (MgPIX), substrate and product of the Mg-chelatase, as well as heme and cobalt protoporphyrin IX (CoPIX). It may play a role in protecting plants from reactive oxygen species (ROS)-mediated damage.	1.5247e-50
CP012375.1\|AOC53208.1\|2456826_2457621_+\|Tryptophan-synthase-alpha-chain	gnl\|CDD\|237285	PRK13111, trpA, tryptophan synthase subunit alpha; Provisional.	1.01769e-131
CP012375.1\|AOC53198.1\|2442925_2443162_+\|Ferredoxin-thioredoxin-reductase,-variable-chain	gnl\|CDD\|367263	pfam02941, FeThRed_A, Ferredoxin thioredoxin reductase variable alpha chain.	1.07453e-35
CP012375.1\|AOC53201.1\|2446346_2446598_+\|4Fe-4S-ferredoxin,-iron-sulfur-binding	gnl\|CDD\|224069	COG1146, COG1146, Ferredoxin [Energy production and conversion].	9.6414e-09
CP012375.1\|AOC53204.1\|2448046_2448487_+\|hypothetical-protein	gnl\|CDD\|279973	pfam01710, HTH_Tnp_IS630, Transposase. Transposase proteins are necessary for efficient DNA transposition. This family includes insertion sequences from Synechocystis PCC 6803 three of which are characterized as homologous to bacterial IS5- and IS4- and to several members of the IS630-Tc1-mariner superfamily.	6.46418e-05

>CP012375.1|AOC53206.1|2454318_2455344_+|Oligopeptide-transport-system-permease-protein-OppB
MSRRAALQSYLLVRLLLAPLMLWTIVTVVFLLMRVAPGDPTDAILGNRAPESAKNALREQLGLNKPLFFQYLDYIFHLMRLNLGDSLTSKGVTVWEIIAKHFPATVELTFYGMLIAVIVGVGLGIITASRPNTPLDAGGRLFGLITYSLPIFWVGMLLQLIFAVQLRWFPLGTRFPLSETPPQTITGLYTLDSLMTLQLDKLPTALYYLALPSFTLGILLSGIFERMVRVNLKQTLQADYVDAAKARGIPEKTIMIAHALKNALIPVITVLGLTFAALLGGAVLTEVTFSWPGLGNQLYRAISLRDYPTVQGLMAFFATIVVFASILIDLINAYIDPRIRY
>CP012375.1|AOC53205.1|2448669_2448918_+|transposase
MLLPELLPGQIIIIDNASFHPKERIKKLLAKAGCEVLFLPAYSPDLNKIEKFWARLKNYVSQIINDSENLVDAVSKAFRHLS
>CP012375.1|AOC53204.1|2448046_2448487_+|hypothetical-protein
MAAPYSDDLRQKAVSAVERGEKKSHVCRTLNISRNTLDIWLKRKKQTGTVAAKTNYRRGPKPQIDDLEAFQKFAEQYGHLTQEKMAQKWANPVSRMRIGQALKRIGFTRKKKLMATEKERKKPEKSFSKKSEVMPRKDLSILMKLE
>CP012375.1|AOC53203.1|2447725_2447923_-|Mobile-element-protein
MPVLICSLYSTDLVLYHWGYSRLKSGVTFGFIAQSKLLGGRTPTPPRISFSVGCLQAAADIFVII
>CP012375.1|AOC53202.1|2446807_2447545_+|Branched-chain-amino-acid-transport-ATP-binding-protein-LivF
MDYLLEVEQVYAGYVQDLYILQGVNFRIAPGELVTVIGPNGAGKSTLAKTIFGLLKPSAGTITFKGKNIAGWKSNQIVPLGMGYVPQIANVFPSLSIEENLEMGAFTSKKAIKPLKERIYAMFPRLDERRRQKAGTLSGGERQMLAMGRALMLQPDLLILDEPSAALSPILVTSVFEQIKAINQTGTAIILVEQNAKKALMMSDRGYVLESGQDRFQGSGQDLLNNPKVGELYLGAAHHGAHGKD
>CP012375.1|AOC53201.1|2446346_2446598_+|4Fe-4S-ferredoxin,-iron-sulfur-binding
MLRIRGENTVPHSIVTGTCEGVADCVSACPVACIHPGPGKNVKGTDWYWIDFATCIDCGICLQVCPVEGAIVPEERPDLQKTP
>CP012375.1|AOC53200.1|2444592_2446278_+|glycosyl-transferase,-family-2
MNPSYNNSIPVQRIKVSVIVSTYKSAQFIRGCLEDLVTQTLYEKGEVEIIIIDSASPENEGEIIQEFQENYPNIIYQRTRERETLYQAWNRAIKLARGSYLTNGNTDDRRCFNALEIMANYLDNNREISLVYADQLITTIKNDTFATTPALKHWNWPNYSYQQMRQGCCVGSQPMWRKMLHDKYGYFQENFRCAGDYEFWLRIGSQGEKMALIPEILGLYYLNLQGLEHGSNGQALQEHYQVCKIYEIPHPDIKDIEIKPNPVKMEDLGIILQEEEREKLQTIQAISQRRWPIIVIDGVIFQINQGKLAGVWSSILEYWRQLEFSQYIVILDRNNSAPRWEEFKYWPAESYDYNCTGKDAIKIQAICDRLQANLFISTFYTSPLTTPSLLFLASESPEENGKLPVDLEKHYAILSASIIIAFSSDIAQDLRKLYPQISPEQIDIIEFFEVNQKIAEEITNFLWYALSETKESSQNQVWLELRKLQEAQQIMYLKQQQDYRTMQGMEISLKELENNHNYLQKNNRELREEINYLSSRKGIVKTLAKTSILLLAKIKKKLPIF
>CP012375.1|AOC53199.1|2443178_2444396_-|Tyrosyl-tRNA-synthetase
MTVSSSLDWLTRGTSDLFPHQPDSQEPRENLTQLLQTTDRPLRIKLGIDPTGSDIHLGHSIPFRKLRAFQDAGHIAVVIIGDFTARIGDPTGKSEVRKQLTSEEVRANAENYLAQLRPILDFNTPNRLEIRYNSEWLGKLDLSQILELLSTMTVGQMLAKEGFSERYDKENPIFLHEFLYPLMQGYDSVAVEADVELGGTDQKFNIAVGRDLQKYFGKKPQFGLLLPILIGTDGSQKMSKSLNNYVGLRESSLSMYSKLEKTPDALLKDYYELLTNLPLDAMPSNPREAQKQLAIEVVAQFHGEEEALKAQKTAQEIVLQGNTAAAASVPEFSLAAVTFPLKLFYLLSATGLCKSSGEGRRQIQGGAVRIDSEKITDVDKSFETAEALTGKVLQVGKNKFIRFVA
>CP012375.1|AOC53198.1|2442925_2443162_+|Ferredoxin-thioredoxin-reductase,-variable-chain
MKVGDRVRIIDSVVVYHHPEHKSEPFDVKGLEGQVKAFVTEWRGRPVSANLPVLVEFSKKFKAHFRDFELEIVEKAAE
>CP012375.1|AOC53197.1|2439457_2442703_-|Carbamoyl-phosphate-synthase-large-chain
MPRRDDLQKILILGAGPIVIGQACEFDYSGTQACKALREEGYEVILVNSNPASIMTDPEMADRTYIEPILPEIVEKIIAKERPDAILPTMGGQTALNTAVALAKSGVLEKYNVELIGAKLPAIEKAEDRELFKQAMEKIGVPVCPSGIANNLEEAKAIAHQIGSYPLIIRPAFTLGGTGGGIAYNQEEFEPMAQYGLDCSPTSQILVEKSLIGWKEYELEVMRDLADNVVIICSIENFDAMGVHTGDSITVAPAQTLTDKEYQRLRDYSKAIIREIGVETGGSNIQFSVNPTNGDVIVIEMNPRVSRSSALASKATGFPIAKFAAKLAVGYTLDEIPNDITKKTPASFEPTIDYVVTKIPRFAFEKFPGSQPILTTQMKSVGEAMAIGRTFQESFQKALRSLETGRFGFGCDKVETLPPLSEVRASLRTPNPERVYSIYHAFKLGMNGEEIHELTGIDPWFLDKLADLMETEKFLKRTPLKSLRQEDLFAIKQQGFSDRQIAFATNSSEDEVRSYRKGLGIIPVYKMVDTCAAEFEALTPYYYSTYERVESEVLPSDKRKVMILGGGPNRIGQGIEFDYCCCHAAFSLSNAGFETIMVNSNPETVSTDYDTSDRLYFEPLTKEDVLNIIEAEQPEGLIIQFGGQTPLKLAVPLQKYLESPNCPVNTKIWGTSPDSIDAAEDRERFEKILRELDIRQPPNGIARSFQESQAVAKRIGYPVVVRPSYVLGGRAMEIVYSDSELERYMKYAVQIEPDHPILIDKFLENAIEVDVDALSDTTGTVVIGGLMEHIEQAGVHSGDSACSIPHTSLSAPVLTTIRQWTVELAKALKVIGLMNIQYAVQGETVYILEANPRASRTVPYVSKATGVPLAKVASLVMSGKTLAELGIISEAIPRHIAVKEAVLPFQKFPGADTLLGPEMRSTGEVMGIDSDFGKAFAKAEMAAGVILATSGTVFVSMNDRDKTPMVPVVKDLQSLGFRVVATSGTREVLLENGCENIDLVLKIHEGRPHVIDWIKNDWIQFIVNTPSGEESQNDGRQIRRTALDYKLPIITTIAGAKATVAALKSLQSQPLEVKALQDYLA
>CP012375.1|AOC53207.1|2455644_2456562_-|Glycosyl-transferase,-family-2
MFSIYILTHNEEIDIAACVESALLSDDVIVVDSYSSDRTVEIASRYPVRVIQHQFESHGKQRTWMLENIETKYDWVYILEADERMTPQLYAECLRATQQTEFTGFYVAERVMFMGTWIRRSTQYPRYQMRLFRKDQVWFSDYGHTEREECRGKTSFLQETYPHYTCSKGLSRWIEKHNRYSSDEAAETLHQLANGDVSWKNLFFGETEVDRRRALKDLSLRLPFRPLLRWFYMYFILAGILDGKAGFAWCTLQAFYEYLILLKVAEMKQGLPTPPEVRNPFHPPQNGNNSNSHISDFVSLKGKVD
>CP012375.1|AOC53208.1|2456826_2457621_+|Tryptophan-synthase-alpha-chain
MTAVSECFRSLRSQGNCALIPFITAGDPDLSTTAQALRILDRAGADLIELGVPYSDPLADGPVIQAAATRALNRGVKLEDVLEIVKNAQGEVKAPIILFTYYNPIYHRGIDVFLDQIKAAGVSGLVVPDLPLEEAASLLQPAAAKGIEVILLVAPTSPPERIQAIALQSQGFIYLVSVTGVTGMRNQVATRVEELLDSIRSVTDKPVGVGFGISDPTQALQVKNWGADAVIVGSAMVKRLADNSPGDGLKSLEEFCRSLKQAIA
>CP012375.1|AOC53209.1|2457827_2458427_+|Alkyl-hydroperoxide-reductase-subunit-C-like-protein
MTAEGCLRVGQAAPDFTATAVFDQEFKTIKLSDYRGKYVVLFFYPLDFTFVCPTEITAFSDRVSEFASINTEILGVSVDSEFAHLAWIQTERKSGGVGDVAYPLVSDLKKEISTAYNVLDPDAGVSLRGLFIIDKEGVIQHATINNLSFGRSVDETLRTLKAIQYVQSHPDEVCPAGWKEGDATMVPDPVKSKVYFAAV
>CP012375.1|AOC53210.1|2458423_2458546_-|hypothetical-protein
MANGANFLENFPIKMRGELFRPPLKSLPPSIAEGILRIFN
>CP012375.1|AOC53211.1|2458597_2458720_+|oxalate/formate-antiporter-(OxlT-2)
MTTSNYDSELTVLGLPAAKGRWLLIIYQYDETNIDVILYW
>CP012375.1|AOC53212.1|2458982_2459234_-|hypothetical-protein
MKGIIGYFRALLSPQFAPTGIKVAVVVGTILLTINHGYAIISGRMTSDRWMAASLTYLVPYLVNIHGQYSSYRRQQWPKKSQQ
>CP012375.1|AOC53213.1|2459237_2459801_-|serine/threonine-kinase
MSDINAQLQDILAQLQSLSERVALIEARQMLVPDIERYGKLQQFLAEGNFREADAETLRVILEAAGRTRDTLTPEDMMRFPVNVIRVLDRLWKNYSGDHFGFSNQVKLYFAAGGDINTLRTQDAETIRKFGELVGWRDKEQWRIDDYDHWDFSLAAPEGCFPALWWKSPYGLKMVTFCFTRLIECDL
>CP012375.1|AOC53214.1|2459854_2460985_-|Low-affinity-CO2-hydration-protein-CphX
MVTIPVKSSSHPLASYIDRLTAGEALLKDTPQNLIEVVGILKSYGVVLDAYSKNLIYIAENQFLVFFPFFKYFNGQVSWQKLLQHWWHNRINFEYAEYCMKAMFWHGGGGLDSYVDGAAFREVTAKVIQAKFRNNPLVLILNKAFPEFLPEQMRMMAYYSGLGQFWRIMADTFLSLSDLYDARKITNIPEVVAHIKKNLVDNASQAIVYQVKIKGQTYDLIPKSAGLTFLADTAIPYVEAVFFRGTPFPGTISYNAQAYQIPYDQGMFAYGALYADPLPIGGAGIPPTLLMQDMRHFLPDYLHDIYKKSFRQEEDLLVQICETFQKSMFCVTTAAIQGLAPYPLTTTDLKEQKANRIYLEAWMNRFVKSRLEAVNQ
>CP012375.1|AOC53215.1|2461016_2461373_-|hypothetical-protein
MELPELNIEIIWAIINDEIDDETVNKLVWQSLGYRYDESQGKWDNSQVEEDWRCEYPEPPDFIANRPPTVKLTRSILPENKQLLKDKLGFTGYKIGEFNPRMTRRATAANWLCFYALK
>CP012375.1|AOC53216.1|2461560_2462454_+|Permease-of-the-drug/metabolite-transporter-(DMT)-superfamily
MPPSNAKIIFILIIGVVSVSASAIFIRLAIEAVGNATIAFSLFLATSRLILASVVLIPNWLTLSRQKVPVQAYYYAVGAGFCLALHFATWITSLSYTSIAASTTLVTTNPLWVSLLGWWWFREKPSKLTFIGIFVALTGGLLIVLADRDLSSSYPNPLLGNSLALIGAILVSGYILLGREAQRKGLNIKNYITVAYTTAGLALLPAIFLFGQGYESYPLSVYVYVLMMAIFPQLIGHTSFNWALRWVAPTIVTMVILLEPIAASLLGMFIFGEIPAQEVIYGGLILLIGVGIAILGG

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Crispr_ID: CP012375_14

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP012375_14

2769744-2769982

TypeIII

Consensus_repeat	Method
AGAAATTAATTGACTGGAAACA	PILER-CR

3 spacers

cas10,cmr3gr5,cmr4gr7,cmr5gr11,csm3gr7,cas14j

The CRISPR arrays of CP012375_14

>merge|CP012375|14|2769744-2769982|PILER-CR
AGAAATTAATTGACTGGAAACAAAAGGGTTCTCCCTCTTTCAAGTTTTCAACTGCCCGACTCTCTACTCAGTGGAGAAATTAATTGACTGGAAACAAAAGGGTTCTCCCTCTTTCAAGTTTTCAACTGCCTGACTCTCTACTCGCGCTTAGAAATTAATTGACTGGAAACATTTGTAGGGTTAATTCATGAATTAACCCTACTCTCCACTCGCGCTTAGAAATTAATTGACTGGAAACC

>CP012375|14|2|2769744-2769982|PILER-CR
AGAAATTAATTGACTGGAAACA	AAAGGGTTCTCCCTCTTTCAAGTTTTCAACTGCCCGACTCTCTACTCAGTGG
AGAAATTAATTGACTGGAAACA	AAAGGGTTCTCCCTCTTTCAAGTTTTCAACTGCCTGACTCTCTACTCGCGCTT
AGAAATTAATTGACTGGAAACA	TTTGTAGGGTTAATTCATGAATTAACCCTACTCTCCACTCGCGCTT
AGAAATTAATTGACTGGAAACC

Protein	Signature genes	Signature genes Name	Protein_function
CP012375.1\|AOC53552.1\|2777540_2777660_-\|hypothetical-protein	unknown	unknown	unknown
CP012375.1\|AOC53548.1\|2773784_2774210_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226278
CP012375.1\|AOC53550.1\|2775442_2776876_-\|Phosphoglucosamine-mutase	unknown	unknown	gnl\|CDD\|100093
CP012375.1\|AOC53544.1\|2770016_2770634_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|131644
CP012375.1\|AOC53539.1\|2761060_2763004_-\|CRISPR-associated-RAMP-Cmr6	csm3gr7	pfam03787_csm3gr7_CAS-III-A:CAS-III-D	gnl\|CDD\|187792
CP012375.1\|AOC53546.1\|2771662_2772922_+\|Mobile-element-protein	cas14j	-	gnl\|CDD\|223747
CP012375.1\|AOC53534.1\|2757991_2758153_+\|hypothetical-protein	unknown	unknown	unknown
CP012375.1\|AOC53547.1\|2773279_2773612_+\|hypothetical-protein	unknown	unknown	unknown
CP012375.1\|AOC53540.1\|2763067_2763424_-\|hypothetical-protein	cmr5gr11	cls000022_cmr5gr11_CAS-III-B	unknown
CP012375.1\|AOC53551.1\|2776944_2777289_-\|hypothetical-protein	unknown	unknown	unknown
CP012375.1\|AOC53541.1\|2763789_2764569_-\|CRISPR-associated-RAMP-Cmr4	cmr4gr7	cd09682_cmr4gr7_CAS-III-B	gnl\|CDD\|274210
CP012375.1\|AOC53553.1\|2777662_2778496_+\|Photosystem-II-manganese-stabilizing-protein-(PsbO)	unknown	unknown	gnl\|CDD\|366770
CP012375.1\|AOC53536.1\|2758970_2759813_-\|putative-alpha/beta-hydrolase-superfamily-protein	unknown	unknown	gnl\|CDD\|223669
CP012375.1\|AOC53549.1\|2774422_2775400_+\|O-demethylpuromycin-O-methyltransferase	unknown	unknown	gnl\|CDD\|366359
CP012375.1\|AOC53535.1\|2758177_2758486_-\|hypothetical-protein	unknown	unknown	unknown
CP012375.1\|AOC53537.1\|2760045_2760498_+\|hypothetical-protein	unknown	unknown	unknown
CP012375.1\|AOC53542.1\|2765003_2766131_-\|CRISPR-associated-RAMP-Cmr3	cmr3gr5	cd09748_cmr3gr5_CAS-III-B	gnl\|CDD\|187879
CP012375.1\|AOC53545.1\|2771180_2771456_-\|transposase	unknown	unknown	gnl\|CDD\|376616
CP012375.1\|AOC53538.1\|2760690_2760963_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377648
CP012375.1\|AOC53543.1\|2766103_2769118_-\|CRISPR-associated-RAMP-Cmr2	cas10	cd09679_cas10_CAS-III	gnl\|CDD\|378863

Protein	Function_ID	Function_description	E-value
CP012375.1\|AOC53549.1\|2774422_2775400_+\|O-demethylpuromycin-O-methyltransferase	gnl\|CDD\|366359	pfam00891, Methyltransf_2, O-methyltransferase. This family includes a range of O-methyltransferases. These enzymes utilize S-adenosyl methionine.	9.85735e-52
CP012375.1\|AOC53539.1\|2761060_2763004_-\|CRISPR-associated-RAMP-Cmr6	gnl\|CDD\|187792	cd09661, Cmr6_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr6. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; This protein is a subunit of Cmr complex.	4.59827e-20
CP012375.1\|AOC53546.1\|2771662_2772922_+\|Mobile-element-protein	gnl\|CDD\|223747	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	1.41113e-30
CP012375.1\|AOC53550.1\|2775442_2776876_-\|Phosphoglucosamine-mutase	gnl\|CDD\|100093	cd05800, PGM_like2, This PGM-like (phosphoglucomutase-like) protein of unknown function belongs to the alpha-D-phosphohexomutase superfamily and is found in both archaea and bacteria. The alpha-D-phosphohexomutases include several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Other members of this superfamily include phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of these enzymes has four structural domains (subdomains) with a centrally located active site formed by four loops, one from each subdomain. All four subdomains are included in this alignment model.	0
CP012375.1\|AOC53538.1\|2760690_2760963_+\|hypothetical-protein	gnl\|CDD\|377648	pfam06305, LapA_dom, Lipopolysaccharide assembly protein A domain. This family includes a domain found in lipopolysaccharide assembly protein A (LapA). LapA functions along with LapB in the assembly of lipopolysaccharide (LPS). Domains in this family are also found in some uncharacterized bacterial proteins.	0.000895653
CP012375.1\|AOC53541.1\|2763789_2764569_-\|CRISPR-associated-RAMP-Cmr4	gnl\|CDD\|274210	TIGR02580, putative_CRISPR-associated_protein, CRISPR type III-B/RAMP module RAMP protein Cmr4. This model represents a CRISPR-associated protein from the family that includes TM1792 of Thermotoga maritima. This family is part of the broad RAMP superfamily (pfam03787) collection of CRISPR-associated proteins. It is the fourth of a recurring set of six proteins, four of are in the RAMP superfamily, that we designate the CRISPR RAMP module.	5.34183e-32
CP012375.1\|AOC53553.1\|2777662_2778496_+\|Photosystem-II-manganese-stabilizing-protein-(PsbO)	gnl\|CDD\|366770	pfam01716, MSP, Manganese-stabilizing protein / photosystem II polypeptide. This family consists of the 33 KDa photosystem II polypeptide from the oxygen evolving complex (OEC) of plants and cyanobacteria. The protein is also known as the manganese-stabilizing protein as it is associated with the manganese complex of the OEC and may provide the ligands for the complex.	5.67742e-155
CP012375.1\|AOC53543.1\|2766103_2769118_-\|CRISPR-associated-RAMP-Cmr2	gnl\|CDD\|378863	pfam12469, DUF3692, CRISPR-associated protein. This domain family is found in bacteria and archaea, and is typically between 101 and 138 amino acids in length. The proteins in this family are frequently annotated as CRISPR-associated proteins however there is little accompanying literature to confirm this.	1.44272e-43
CP012375.1\|AOC53544.1\|2770016_2770634_-\|hypothetical-protein	gnl\|CDD\|131644	TIGR02595, conserved_hypothetical_protein, PEP-CTERM protein-sorting domain. This model describes a 25-residue domain that includes a near-invariant Pro-Glu-Pro (PEP) motif, a thirteen residue strongly hydrophobic sequence likely to span the membrane, and a five-residue strongly basic motif that often contains four Arg residues. In nearly every case, this motif is found within nine residues, and usually within five residues, of the extreme C-terminus of the protein. Proteins with this motif typically have signal sequences at the N-terminus. This region appears many times per genome or not at all, and co-occurs in genomes with a proposed protein-sorting integral membrane protein we designate exosortase (see TIGR02602). PEP-CTERM proteins frequently are poorly conserved, Ser/Thr-rich proteins and may become extensively modified proteinaceous constituents of extracellular material in bacterial biofilms. [Cell envelope, Surface structures].	0.00477831
CP012375.1\|AOC53542.1\|2765003_2766131_-\|CRISPR-associated-RAMP-Cmr3	gnl\|CDD\|187879	cd09748, Cmr3_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; This protein is a subunit of Cmr complex.	7.39137e-63
CP012375.1\|AOC53545.1\|2771180_2771456_-\|transposase	gnl\|CDD\|376616	pfam01797, Y1_Tnp, Transposase IS200 like. Transposases are needed for efficient transposition of the insertion sequence or transposon DNA. This family includes transposases for IS200 from E. coli.	1.85441e-30
CP012375.1\|AOC53536.1\|2758970_2759813_-\|putative-alpha/beta-hydrolase-superfamily-protein	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	2.33692e-32
CP012375.1\|AOC53548.1\|2773784_2774210_-\|hypothetical-protein	gnl\|CDD\|226278	COG3755, COG3755, Uncharacterized protein conserved in bacteria [Function unknown].	1.72055e-30

>CP012375.1|AOC53543.1|2766103_2769118_-|CRISPR-associated-RAMP-Cmr2
MALGYWQAKIWGLLQAPVLKALHSNSGRSGDSFWRDLEVMKLWGKHNSEESTKKILKRIKLADYITSASDRAAISSLTQFVNYDQQTGLELRHLLSGEPLALKLANTTHKKIASNRTDYLKKQETRLFNQIPARLRTGISENEAKELFWWLWRCLPQAATKLLDDENLLLMPAETRIPDGSIWSHASVTAAIAGSLAGYDLTPEDVVNKWPTGKQLSHPYLVSFSFSPVQELIKASRKMGDFWAGSWILHYLSAKVCWQLAQQYGPDSLIYPSLYAQPLIDQWLLEKYSDFSSWIDPPGDQQLLTAGFPNVIILILPKDKVAAAMQTAKSRLLKEWKEISRQVFEKLQLKENSRTWDSWLNAQWQTYYVGVPIGREDQTLTSGEIYQENENIAENQAEDPEKAQSWRDKQNELYNLYDKKALFLEKEREFLQKAGELAHQKWKRPPFSSNVGSWWSSAFEQNLSALAAVKNARDWQIPTAFGPRSTISGLGPVVHPDGNNDWISEKASKEYWQRNTGLFNGIEQLNATETVKRGLHLILPKLLKNSDQKRLDAAYPDLTVGVAGYLKTGGDLDYFHRVCRTISRRLREDGKKIPTALTQPWGIPYIDNHIEPEYKRYHPRFLNAGWLVEELEIPDEEMANYRHQLSQLIDQNYPHNNPADWYVIAAGDGDGMGEWLKGQKMKPYRDYIPKSLHQYADHPPTETDTLEKEVQKAFGDFVTLDKRIGPSTHHALSRALLDFSNQLVPYLTEQRYAGRLIYGGGDDVLAYTNLWEWDKWLWDIRQCFKGEKDPHGEFNNAGDYWQWKGEKPAENLAKRPLFTMGKRATISFGMVIAHHSVPLAIALENLWEAEKKAKEHTYKGFDGKKVKKDAVQVRVLYGNGNGLESTAKFDVFPLWQKLLASNSDASLFEAVAGLWQQHPAPMIEAIEVWVKAFSSRQENLTTDNREFPEDLSNFLKHLWLTTENDANNLKEAVDSWMKLAAFMTRKREIKIGGSLLCIGTQSLP
>CP012375.1|AOC53542.1|2765003_2766131_-|CRISPR-associated-RAMP-Cmr3
MYWYTITPLDVLLLRDAKPFSSKETAWAGSTFPPNSYTIAGALSSLLNRSKNSYFKITGPFLSFAGDTLYLPRPLGFANSDPLIPISWSDNLAISENHIFWDPLKPAPLAKANPRKNCQNRENEGQEENESKYRQYLPFEVILDYLKTGAIDPSQWLVKHEGEDKPWREEIRYHNAMQPGSKRLKDADGYFVEKAIRMLPGWSIAIGIDVNIPTPTTLRLGGEGHRVMLEKCDDLGQQWEQLKQQSRKNFQAEGKAIAYLATPGIFERRHDNNQAICRSWPWEWKLAHTVNSNQKAGHLVSVATDRAIPISCRIQSKENTSIPAPQVFAAPPGSQYYLNQPDRLFQDQPDSPEYHQRWRKLGYSELLWINYKENS
>CP012375.1|AOC53541.1|2763789_2764569_-|CRISPR-associated-RAMP-Cmr4
MNLIHFYLLSPLHTGGTTQEGNLVGIARESHTTLPYIPSSTIRGKIRSLATEETLKFKLFGNEIDQGAENLVQGDIWIGDGSILWLPVSSLSHGVVWITSPLLLRRWTRLTNTRLTIPPEYSCSFTKPNTNIYLKDAILKDNDLKDWSTWTSFIPQNSVSSGINKVLVLPDQHCTTLIQMSLWRQVKIKLDEHKSVDGGFRYEEAIPPDTLMYFPWGITSQANGTGQQSQADFKRLLADNEIIQIGGQESLGRGFVQQL
>CP012375.1|AOC53540.1|2763067_2763424_-|hypothetical-protein
MFNALQELYLNTGDDSRRKEQKKQALELYTYLSTWGMMRLKAEETALNQEGKKEVVAKYFQCLEELSQRNHLSNSQGLTTLKDLSTDDYLGLTGLGLEIAQEFSFWANAIYSDVESGD
>CP012375.1|AOC53539.1|2761060_2763004_-|CRISPR-associated-RAMP-Cmr6
MSHSPLPRPNRPQKPILKNPAIQQQNNHQPPKKPPSGGGGNNNPPQPSPWLNAEKEPQPDQSASFVEYLRWMRAADHDYKDATKVQILQTAQENANYTQRLDQLNQRTQLLAKDGITFQVKSTWRIRVSGHRGPESILLPAFDALGMPYIPSSTLRGVARNQAIREIMAENNLEWKEAVEKTTLYFGDINAKEKKNKTGKVIFFDAYPLPTKNGGLEVDMANNIWSWKDDSTQYSPNPNPFLSLKEPTFLIGLRLASNCGDEKILEQVKQWLKKGLQLGIGSQVNSGYGQLKQIDDTSHSDNNKNSHDSGFYRLDFELEGQLIHGYQRFTQWQWNERRNEWQMRSAPVAEVRPTAFKSMLRYWFRVLASGVLPINEVQNIESELFGGINPKKYGYLQVNILDGKVSQKEPRTNAQGKNDPCGEQQGTLVLSLSSETPKDKEEAVKKLAKHLTWFLADMGGIGQGARRPSYSRKSREHAPWFRGSTLYIDSEEDFWAIPNDLQGFKQQFQQRLRDFYGILDNISETNINTNNLRTVDQVSQNQWIDAADSNCQIFVCAGNEQRGKPHALAILHSDTLKITSKNGQREYDGNLCGKVSGGAKPSPVWIADLGDYQIVTVFGATAAPRKNFVSELKAKTISENFAQIFPL
>CP012375.1|AOC53538.1|2760690_2760963_+|hypothetical-protein
MNTITNFLASAIVGGWIMTMAVFAIQNIQPVSLKFLQFESIKLPIGILLAFSLAMGFFIAAVIPAFLRKSKKSPRSRFSPPESGLDEFDF
>CP012375.1|AOC53537.1|2760045_2760498_+|hypothetical-protein
MKCDRFLTFSLVLSLGLVFPPSLPAQTPPATTFHPGPWQPVARVNMSRPVEIKIINQTDIDLNYDLSANIDSSPQLLSPGTETTLRGLVIPAYILINRANAAADRYSSSLIYAVEVNQDNLVTITVTKVPGSAPGYTTFNINQQGAIYIY
>CP012375.1|AOC53536.1|2758970_2759813_-|putative-alpha/beta-hydrolase-superfamily-protein
MPTIDISGVSHSYELFSPRADKPVLVFIHGWLLSRHYWQPLVDILSPDYPCLVYDLRGFGDSQKITSNSPPSSYNLESYSQDVITLLNRLNLDAAWLVGHSLGGSVALWAADICPERIKGVICMNAGGGIYLKEEFERFREAGRQILQRRPPWLPRVPLIDVLFSRMMVKQTLSKKWGKQRVIDFVRADYQAALGSLLETTTISEVHLLPQIVSRLPQPVYFLAGKEDTIMEVKYVNHLASFHPLFETGGNVIELSGCGHFAMLEQTAAVAEKMMAILSR
>CP012375.1|AOC53535.1|2758177_2758486_-|hypothetical-protein
MLHRKIYQFCMDGQEVCIFLRDQQRWIDNARIVDLESDLVTIRYETEEEDEISSWEEMVRLESIGAVSRKLASVSRTNPDINVSEDCPEAEQLYPHSPDSLD
>CP012375.1|AOC53534.1|2757991_2758153_+|hypothetical-protein
MEVGTRIHFAPPAYNRENPAALTIILEQVVILSGSLPFHSLKVPWPLFKPRDF
>CP012375.1|AOC53544.1|2770016_2770634_-|hypothetical-protein
MNILNIAKLATFGLGVTLVPLALTINNSAQAAVFTFNGGDNALSSITKTVDGITLTISNNQPRGSFFADGDGVAVLGGPSSPGQVTTSFNLTFSSAVQLTSYNIGFIEGLEGDESFTLSNGSSSSVETSPFSTGSRNFNNQFTVAAGQTVSFSVIFGTGDINDLIQWSELKVTPASNPTTTPEPSTILGLLAVGSLGALSRKLQG
>CP012375.1|AOC53545.1|2771180_2771456_-|transposase
MLDFNGESDHVHRIIDYKPDIALSKLIANLKTVSSRLIRKEFPDLAAKYFYNKPYFWTGAYFVASCGDITIEQLKKYVENQNSPKVETLPR
>CP012375.1|AOC53546.1|2771662_2772922_+|Mobile-element-protein
MITLTYQYKLKVNRQQEREIIHILDVCKSVYNYALSERKDWLNSRKCLADHCSLVSEYIIPADQPYPNYFVQAKNLTEAKKIYPILKTVNAQVLQQVLKTLDKAFNQMKSKSFGFPRFKKKMRSFVFPALSKNFLGDEYLNFPQLGKIRIRKSREYPSGFEPKQARIIQKASGFYVSVSFQSTELVPDMTEGKTCLGIDAGIESFIATSRGDLIKDPRFLLKVQSKLKLLQGRLKRKTKGSSNWLKLQEKIARLHEKVSNTRRDWHFKLSHYLCDLADNIFVEDINFVSWSRGIVRKQSLDSAIGSFINEILPFVIWKRGKYYLKVDKNGTSQDCPNCGAITGKKALSERVHRCDSCGHIEPRDTASAKVIENRGKNAVGLTVLENARGGDLTGIDRLNQVDLVKSLRTENPPLHRASG
>CP012375.1|AOC53547.1|2773279_2773612_+|hypothetical-protein
MGLTVAGLVIPSVLGSTSKVLAEDITFTLENKTRVNMTEFYASPSGVKSWENDILGDDVLGSGEQVEININDERTTCNYDFQAKFADGDVVEKYNINICELAGGSYEFYD
>CP012375.1|AOC53548.1|2773784_2774210_-|hypothetical-protein
MGKFLLTVLSIASLFTVGMATRSIAGPTSGARDRQLAQRPNCNNPQTQSEMNICASIAYQNADRKLNQVYQQLLPKLSAAHKQKLISAQQAWIKFRDSSCEFERSAFEGGSMAPMVYGFCLADVTEQRTKDLQRYLEDSDR
>CP012375.1|AOC53549.1|2774422_2775400_+|O-demethylpuromycin-O-methyltransferase
MVSGYWLSQAIYAAAKLSLAEHLSKGAKSCQELASLTETNPAALYRLMRALASVGIFQETESQQFILTPLAEHLSSDHPRSVKATAIMLGEAPHYQAWGNVLHSIKTGQPSFDDVFGMGVFEYFQTHPLDAEIFEQSMNSFSLSEEKAILAVYDFSEFQTLVDVGGGYGEMLGTILEQYPQLKGILFDEEYVISHCQPTLEKHGIVDRCQTVGGSFFESVPSGGDGYLLKHIIHDWDDRRAIAILKNCCQVLDSNGKVLVLEMVVPAGNNPSAAKMLDLNMLVMCPGGKERTAEEFEELLSQAGLKLNRIIPTQEDICIIECVKK
>CP012375.1|AOC53550.1|2775442_2776876_-|Phosphoglucosamine-mutase
MTTVNPIKFGTDGWRGIIAADFTFDRVALLAPLAARVLADNYGQITGSRTIIVGYDRRFMAEDFAQTAAESLQKAGFDVLLSQSYAPTPAFSWAARSENALGAIVLTASHNPAKYLGLKVKGYFGGSVSPEITQQIEALLSNPPQFNAAAGKLSTFEPWSGYCQGLRQKVNIAAIAEAIESGQLKVYSDVMHGAAATGLERLLGVGITELRGNRDPLFGGGSPEPLPRNLTEIIDKLAHSANLAPLRVGLVFDGDSDRVAAIDGRGNFLSTQNLIPILIEHLAGKKGMRGEIVKTVSGSDLIPKLASLYGLSVFETPIGYKYIADRMLTTPVLIGGEESGGVGYGSHIPERDALLSALYVLEAVVESGQDLSDLYAQLQDKTGFHSQYDRIDLPLANMEARDQLITALDQEPLREIAGKQVTDCNPIDGYKFRLEDGSWLLIRFSGTEPVLRLYCESSTLDRVHEILAWAKSWATYI
>CP012375.1|AOC53551.1|2776944_2777289_-|hypothetical-protein
MNSALPGDNSQLDGQLHSLVTTVTAIAEEHQQDCNGLLMLLRTLENLHRQIREQMFEPSLPNTRKDLYGLLRDIEETGGWPYIERMKLQMLMEKLLASEVGALDPAAKTDDREK
>CP012375.1|AOC53552.1|2777540_2777660_-|hypothetical-protein
MSTSLCQSLQLLPLIHSLMNYRIGRANSPKLSLSKIRDH
>CP012375.1|AOC53553.1|2777662_2778496_+|Photosystem-II-manganese-stabilizing-protein-(PsbO)
MRFRALLVAFLALCLGVLTACSDAPSAVLNRNELTYDEILNTGLANKCPQISEFTRGTLPLEPGESYVVTDLCLEPQEYFVKGEPVNKREAATFIPGKLLTRDTTSLEQMTASLTVGEDGVLTLKEEDGIDFQPITVQLPGGERVPLFFTIKGFTGKTEAGFSSINSSTDFVGDFKVPSYRGAGFLDPKGRGVVTGYDNAVALPASADSQDFQRANVKATELGKGTMSLQVTKVDASTGEFAGVFESEQPSDTDLGAKDAEEVKIRGIFYGRLEARA

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Crispr_ID: CP012375_15

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP012375_15

2928983-2929083

Orphan

Consensus_repeat	Method
TATCTATAGAACTAGAAAAGTTTACCAAACAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP012375_15

>merge|CP012375|15|2928983-2929083|CRISPRCasFinder
TATCTATAGAACTAGAAAAGTTTACCAAACAGCGGGCGTTGGGTTTCCTTGCGTCAACCCAACCTACCTTATCTATAGAACTAGAAAAGTTTACCAAACAG

>CP012375|15|14|2928983-2929083|CRISPRCasFinder
TATCTATAGAACTAGAAAAGTTTACCAAACAG	CGGGCGTTGGGTTTCCTTGCGTCAACCCAACCTACCT
TATCTATAGAACTAGAAAAGTTTACCAAACAG

Protein	Signature genes	Signature genes Name	Protein_function
CP012375.1\|AOC53717.1\|2935607_2935883_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227751
CP012375.1\|AOC53713.1\|2932414_2932546_-\|Cell-division-trigger-factor	unknown	unknown	unknown
CP012375.1\|AOC53704.1\|2924963_2926157_+\|hypothetical-protein	unknown	unknown	unknown
CP012375.1\|AOC53701.1\|2923071_2923185_+\|hypothetical-protein	unknown	unknown	unknown
CP012375.1\|AOC53699.1\|2922473_2922614_-\|hypothetical-protein	unknown	unknown	unknown
CP012375.1\|AOC53715.1\|2933019_2933160_+\|hypothetical-protein	unknown	unknown	unknown
CP012375.1\|AOC53702.1\|2923335_2923650_-\|hypothetical-protein	unknown	unknown	unknown
CP012375.1\|AOC53712.1\|2931695_2932343_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|371771
CP012375.1\|AOC53706.1\|2926826_2928017_-\|Tetratricopeptide-TPR_2-repeat-protein	unknown	unknown	gnl\|CDD\|379142
CP012375.1\|AOC53700.1\|2922657_2923053_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237030
CP012375.1\|AOC53707.1\|2928060_2928942_-\|peptidase-S1-and-S6,-chymotrypsin/Hap	unknown	unknown	gnl\|CDD\|379142
CP012375.1\|AOC53714.1\|2932683_2932920_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224514
CP012375.1\|AOC53716.1\|2933188_2934985_+\|serine/threonine-kinase	unknown	unknown	gnl\|CDD\|224182
CP012375.1\|AOC53705.1\|2926205_2926805_+\|hypothetical-protein	unknown	unknown	unknown
CP012375.1\|AOC53718.1\|2935998_2936511_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|366774
CP012375.1\|AOC53698.1\|2922028_2922190_-\|hypothetical-protein	unknown	unknown	unknown
CP012375.1\|AOC53709.1\|2929856_2930945_-\|Isocitrate-dehydrogenase-[NAD]	unknown	unknown	gnl\|CDD\|333905
CP012375.1\|AOC53703.1\|2923940_2924444_+\|hypothetical-protein	unknown	unknown	unknown
CP012375.1\|AOC53710.1\|2930941_2931082_-\|hypothetical-protein	unknown	unknown	unknown
CP012375.1\|AOC53711.1\|2931385_2931622_-\|NifU-like-protein	unknown	unknown	gnl\|CDD\|376458

Protein	Function_ID	Function_description	E-value
CP012375.1\|AOC53707.1\|2928060_2928942_-\|peptidase-S1-and-S6,-chymotrypsin/Hap	gnl\|CDD\|379142	pfam13365, Trypsin_2, Trypsin-like peptidase domain. This family includes trypsin-like peptidase domains.	1.49716e-21
CP012375.1\|AOC53717.1\|2935607_2935883_-\|hypothetical-protein	gnl\|CDD\|227751	COG5464, COG5464, Uncharacterized conserved protein [Function unknown].	1.89808e-16
CP012375.1\|AOC53700.1\|2922657_2923053_-\|hypothetical-protein	gnl\|CDD\|237030	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit.	0.000105936
CP012375.1\|AOC53716.1\|2933188_2934985_+\|serine/threonine-kinase	gnl\|CDD\|224182	COG1262, COG1262, Uncharacterized conserved protein [Function unknown].	2.45575e-73
CP012375.1\|AOC53711.1\|2931385_2931622_-\|NifU-like-protein	gnl\|CDD\|376458	pfam01106, NifU, NifU-like domain. This is an alignment of the carboxy-terminal domain. This is the only common region between the NifU protein from nitrogen-fixing bacteria and rhodobacterial species. The biochemical function of NifU is unknown.	6.54207e-35
CP012375.1\|AOC53718.1\|2935998_2936511_-\|hypothetical-protein	gnl\|CDD\|366774	pfam01724, DUF29, Domain of unknown function DUF29. This family consists of various hypothetical proteins from cyanobacteria, none of which are functionally described. The aligned region is approximately 120-140 amino acids long corresponding to almost the entire length of the proteins in the family. Structure 3fcn is a small protein that has a novel all-alpha fold. The N-terminal helical hairpin is likely to function as a dimerization module. This protein is a member of PFam family PF01724. The function of this protein is unknown. One protein sequence contains a fusion of this protein and a DnaB domain, suggesting a possible role in DNA helicase activity (hypothetical). Dali hits have low Z and high rmsd, suggesting probably only topological similarities (not functional relevance) (details derived from TOPSAN). The family has several highly conserved sequence motifs, including YD/ExD, DxxNVxEEIE, and CPY/F/W, as well as conserved tryptophans.	4.19088e-50
CP012375.1\|AOC53709.1\|2929856_2930945_-\|Isocitrate-dehydrogenase-[NAD]	gnl\|CDD\|333905	pfam00180, Iso_dh, Isocitrate/isopropylmalate dehydrogenase.	2.71167e-45
CP012375.1\|AOC53706.1\|2926826_2928017_-\|Tetratricopeptide-TPR_2-repeat-protein	gnl\|CDD\|379142	pfam13365, Trypsin_2, Trypsin-like peptidase domain. This family includes trypsin-like peptidase domains.	8.2239e-20
CP012375.1\|AOC53714.1\|2932683_2932920_+\|hypothetical-protein	gnl\|CDD\|224514	COG1598, COG1598, Predicted nuclease of the RNAse H fold, HicB family [General function prediction only].	1.83945e-06
CP012375.1\|AOC53712.1\|2931695_2932343_-\|hypothetical-protein	gnl\|CDD\|371771	pfam11866, DUF3386, Protein of unknown function (DUF3386). This family of proteins are functionally uncharacterized. This protein is found in bacteria and eukaryotes. Proteins in this family are about 220 amino acids in length.	1.89831e-123

>CP012375.1|AOC53707.1|2928060_2928942_-|peptidase-S1-and-S6,-chymotrypsin/Hap
MAGVGGLLLGLSTPLLAVPSYAPALEPNRANAYSSQQLSEQQLLQLARAITVKVLSGQGWGSGILVEKQGSSYKVLTNDHVLGRYRSRVWQIQTPDGKIHRGELVRTVRLNNYDLGLVSFRSSQVYSIADLANVDDLTIGDEVFAAGYPFDFTFTVGKVSLLSDKSFSGGYQIGYTNKIKNGMSGGPLLNRQGKVIGINGIHAYPLWGKSYVFADGTVTSPALWEQMSRLSWAIPIGTFLKSGSSSPSASSRQRPAVSPPSLPTHREPTFSEDFPSPSSSTPREKNPAPTPLW
>CP012375.1|AOC53706.1|2926826_2928017_-|Tetratricopeptide-TPR_2-repeat-protein
MKISAALVSIAVFVVSPQIAKASTTEQIEKIAEKITVLIPSEEEGANGKITANGSGSIIAKEGRVYTVLTASHVICKDARDACKFYYDQLKIITWDGKQYPLDYNSIKKLPGVDLALVQFQSDQNYQLATLANYQVADEQFIFASGWPDPKFIGKRKRLFNVGKVLPKDITPLLKIFPPELGYEIVYTSVTYGGMSGGPVLDINGRVIAVHGQNEAEKIEKVPVPIGFSLAIPITTFLKLAPQSGIQGQINVESSPPNALSLREIGDELYKAFEVPNKNDTNPLNWLNQGNKMWRLGQLALAYAAYEKALQLDAQLYQAWYGKGLLLTYWKRHQEALAAYEQALKINPDSDTAKKLRDKLQESLGGGNTPSLTPSQPTTAPTVEPSPQPSNPRRLW
>CP012375.1|AOC53705.1|2926205_2926805_+|hypothetical-protein
MLMKWLTNWQVSLVAAVLLTNSLVSPVMAQTGNQSDITGPILSTSDFAGQTISTPTVTGLGFQGGEPAQISVNQTAASVNTQLADNNLTSPTGTPISPTVQQPILSILTADAQAGNNITAVTAALTTVPGAPPLSVIQNLLDGLNGLTSGGAVNPANLLAAVQTYNAMILASNEAFLASPPAELRAIQASLAALVESAR
>CP012375.1|AOC53704.1|2924963_2926157_+|hypothetical-protein
MRHIFSGGIFITSCVGTAVLCDGVKAIPSPLDIDAASIRVSQEKIIINSPVELERTDRILTTNSFSTTEGLADSNLPSSLENKLEKSSLDTLATEKTGTISTLEEWKANLGTTRASQLLPAGDNNSPEVEKWQAQASTPVDTNVSPELQRLRQDFLIEEPQLRQQTLSAKLAEFVVTPSGSISTPSAFGATFGQIFGGFGFQSRTRFTNEADGGLALGGGLGDPQKIVGLDVTLAILSLFDDNAGRGSFSFKIHRSLPESFAVALGFENAINWGGTDGGSSIYGVVSKFFQLTKTTKEPFSQLTLSLGVGGGRFRSEGAIEDGVNSVGVFASAGLRIVEPVSAIVEWSGQDLNAGISLIPFPKIPLTVNLAGADLTGNAGDGARFVMSIGYNYFFPR
>CP012375.1|AOC53703.1|2923940_2924444_+|hypothetical-protein
MKTFVERYRSWFNWTTLAMVVLGFWLSASFVIDLIIIPSLSVAGMMTQNGFASAGYLLFGIFNHLELVCAAIVLCSFVVFHRYHTLIHLPEHRSLLFAGVLLVITLIYTYFLTPNLSAMGLLAPVTASGMSGEMMSLQIGYWFLEVVKGLIAFTLLRWCWRDAFKLA
>CP012375.1|AOC53702.1|2923335_2923650_-|hypothetical-protein
MDKDFRNYRMVCTLTFGDIYGQIIVWLIVIFLTLASTLALWSSTRQIFALATVGLVVVLSLPFLLFAFVTTLLNHIEFVPIETETNIRRGPVPGVSGSRVPAAG
>CP012375.1|AOC53701.1|2923071_2923185_+|hypothetical-protein
MGKCKRLSILKFIIDRDQAANKIIVLTISLLHLFFFG
>CP012375.1|AOC53700.1|2922657_2923053_-|hypothetical-protein
MLKNLFGGKKSDFYLELKETDGEQQATATTAAAAPVVEAPAAAVESAAAPVAEKKAQKTSIKKEKQAKETPAAPVSAPAPVAPTNGKVEPQEVEFATKYLITPSLSRRRPGPSLNGFKDMARKAKLPANRG
>CP012375.1|AOC53699.1|2922473_2922614_-|hypothetical-protein
MTLLFHQGASTDSSLAESFFKVGYLGYSLEYFGDNYCLSSWVIFKI
>CP012375.1|AOC53698.1|2922028_2922190_-|hypothetical-protein
MLILKGISIGSSFGSSQVKQIGFLVRIASAMWNSGNLPQVFRHCWAYLNGSLF
>CP012375.1|AOC53709.1|2929856_2930945_-|Isocitrate-dehydrogenase-[NAD]
MTENIPTIVVMHGDQTGEELLLEALRVLQPSIIRQPLNFADFDLSLAQRRQSNNQVVHEAAEATLKTGLALKAATITPEIKGDVGSPNAILREAMNSQVILRIGRRIPGIRPIGGVNSPIAIVRMAVDDAYGAKEWRETTATGDEIAYRTSRISRATSRAVAEFTFQQAKKTGARVFGGPKFTVSATYEGMFKEELDAAARRHPEVRYQPLLIDATFALLLQTDGEALVIPALNRDGDLLSDFVLQLYGSIAGAESLVLGFDEETLAVKTIMAEAPHGTAPALEGKNIANPMAMILASAALLGYIETNEARKASRAIYESVFETIHEGKKTPDLGGQMTMSEFTDEVIRRVVSKLEVWSALG
>CP012375.1|AOC53710.1|2930941_2931082_-|hypothetical-protein
MVLYIFFCKIDKITELIKVKSIFFSQLTSQLSINIYSKIFIKTQKL
>CP012375.1|AOC53711.1|2931385_2931622_-|NifU-like-protein
MSLTLTPDNVEKVLDEMRPYLMSDGGNVELVEIDGPVVKVRLQGACGSCPSSTMTLKMGIERRLREEIPEIAEVEQAL
>CP012375.1|AOC53712.1|2931695_2932343_-|hypothetical-protein
MTVATTNARDIFRSAYENRYTWDEGFPGYTADIILTQGEEVHTGKIQVNADYSVEVTGIDDEKVQESIYNQMRDIVTHRKRGNFEASHGKNQFNFGQDDPTGAVEILVTGDAMGSNYKVRGQEICQVSRVMGPMAFTINTEESLDTGEGYISIRYNAIFRNAKTDELKGKRDFKETYEKIGNYYLPSCQVINAIDVGGEKSTTEFTFINLQLLES
>CP012375.1|AOC53713.1|2932414_2932546_-|Cell-division-trigger-factor
MCPLCLCGSFHPLALEKCILEYILPTKAGRADFSLSCQIHLVF
>CP012375.1|AOC53714.1|2932683_2932920_+|hypothetical-protein
MTKLSPKVTAIIRSGEQQGYVGECVEISIVTQGNTLDEVVNNLQEAILLHLEGEDPREFGLVAKPSLQIIFELQPEYA
>CP012375.1|AOC53715.1|2933019_2933160_+|hypothetical-protein
MIHESTLLLINPTINQPYYESTLPTSGGFKDRRLKCVLADQKIGLK
>CP012375.1|AOC53716.1|2933188_2934985_+|serine/threonine-kinase
MAEETAKIKLYRKTYQLPQLNRPDLLVLQDQIQERQQLIKTGKRVRHTWLGLRKKEEPLNFEETFQELERLVGDYNQLIGFLADHKDEYRRFFQSLTEEIKEAVAVKCEKLAEKERKRQSLENSIGSADLRDTLRLQKQQIFRTVILVGRASLLMLKKIDLISESIQKLAEDQDTQKQVFSKMIGELNGYKQVYQLQLELDSLEKEAIEMAKVAINLEQYLKPIIGQFQGLIDRVVTIDGELSRSVSEVESLVQNILSSESAGSFRKNENLSASLLNFLVTSEEKRGRLAIALERAEQEGWQWTDVEIPDEEIELETAIQRINNHVIERVGNFITSVVGDSPIPPPPQQKTLLDNKTPFTENLPNGVTLKMVNLPAGEFLMGSPDSDPDARSYEKPPHQVNVNSFAIGKYPVTQAQYQAVMGTNPCHFSNNPQNPVKNVSWDDAQAFCKKLSRITGKTYRLPTEAEWEYACRGGTTTRYYFGDDANQLGDYAWYGGNSQQTIHPVGQKKPNAWGLHDMIGNVWEWCEDDWHSTYENAPKDGSAWITNYQRANPFKIVRGGSWETSSRYCRSANRHDDYTRIIGHFGYGFRVACVSPGL
>CP012375.1|AOC53717.1|2935607_2935883_-|hypothetical-protein
MVYKLPQVSRKEIEAMFSLSDLKQTKVYQEALEEGREEGREEGREEGRQEGELAAKLASIPRLLALGLNFEQIAQALELEIEQVRQATQRE
>CP012375.1|AOC53718.1|2935998_2936511_-|hypothetical-protein
MSSWNETMAVETALSMKALYDQDFVLWASKTAELLKLKKFDEVDWENLIEEVECMGKSDRRAVESLLTRLIEHLFKLAYHKSERERERNVCHWVGEIAGFRTQLGEWLETTTLTNHARDYFQKAYSNARKTLIQAKAVTRDAIPLEPPFSLEQVLDGEWFPIDIDHYFDI

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Crispr_ID: CP012375_16

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP012375_16

3304608-3304703

TypeV

Consensus_repeat	Method
ATCAAGGGGGGATCAAGGGGGGATC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP012375_16

>merge|CP012375|16|3304608-3304703|CRISPRCasFinder
ATCAAGGGGGGATCAAGGGGGGATCGGCACCCCCCTTATCAAGGGGGGCAGGGGGGATCGACACCTCTCTTATCAAGGGGGGATCAAGGGGGGATC

>CP012375|16|15|3304608-3304703|CRISPRCasFinder
ATCAAGGGGGGATCAAGGGGGGATC	GGCACCCCCCTTATCAAGGGGGGCAGGGGGGATCGACACCTCTCTT
ATCAAGGGGGGATCAAGGGGGGATC

Protein	Signature genes	Signature genes Name	Protein_function
CP012375.1\|AOC54084.1\|3300187_3300865_-\|Uracil-DNA-glycosylase-superfamily	unknown	unknown	gnl\|CDD\|224489
CP012375.1\|AOC54080.1\|3297557_3298862_-\|Threonine-synthase	unknown	unknown	gnl\|CDD\|236065
CP012375.1\|AOC54081.1\|3298824_3298956_+\|hypothetical-protein	unknown	unknown	unknown
CP012375.1\|AOC54088.1\|3304762_3306442_-\|High-affnity-carbon-uptake-protein-Hat/HatR	unknown	unknown	gnl\|CDD\|238121
CP012375.1\|AOC54083.1\|3299638_3300184_-\|16S-rRNA-(guanine(966)-N(2))-methyltransferase	unknown	unknown	gnl\|CDD\|223813
CP012375.1\|AOC54087.1\|3303138_3304419_+\|2-alkenal-reductase	unknown	unknown	gnl\|CDD\|273938
CP012375.1\|AOC54095.1\|3313218_3313650_-\|FHA-domain-containing-protein	unknown	unknown	gnl\|CDD\|366133
CP012375.1\|AOC54085.1\|3301008_3301965_-\|GTP-binding-protein-Era	unknown	unknown	gnl\|CDD\|234624
CP012375.1\|AOC54086.1\|3302021_3302768_+\|hypothetical-protein	unknown	unknown	unknown
CP012375.1\|AOC54096.1\|3314053_3314167_+\|hypothetical-protein	unknown	unknown	unknown
CP012375.1\|AOC54090.1\|3307227_3309201_+\|serine/threonine-kinase	unknown	unknown	gnl\|CDD\|319862
CP012375.1\|AOC54078.1\|3296537_3297005_+\|Protein-of-unknown-function-DUF29	unknown	unknown	gnl\|CDD\|366774
CP012375.1\|AOC54091.1\|3309231_3309345_+\|hypothetical-protein	unknown	unknown	unknown
CP012375.1\|AOC54097.1\|3314275_3314740_-\|hypothetical-protein	unknown	unknown	unknown
CP012375.1\|AOC54089.1\|3306395_3306662_+\|DNA-gyrase-subunit-A	unknown	unknown	unknown
CP012375.1\|AOC54082.1\|3299427_3299628_-\|hypothetical-protein	unknown	unknown	unknown
CP012375.1\|AOC54094.1\|3312052_3313198_-\|Aspartate-aminotransferase	unknown	unknown	gnl\|CDD\|235654
CP012375.1\|AOC54093.1\|3311039_3311912_+\|rRNA-small-subunit-methyltransferase-H	unknown	unknown	gnl\|CDD\|234597
CP012375.1\|AOC54092.1\|3309497_3311009_+\|Threonine-dehydratase-biosynthetic	unknown	unknown	gnl\|CDD\|236417
CP012375.1\|AOC54079.1\|3297175_3297451_-\|moaD-family-protein	unknown	unknown	gnl\|CDD\|340594

Protein	Function_ID	Function_description	E-value
CP012375.1\|AOC54084.1\|3300187_3300865_-\|Uracil-DNA-glycosylase-superfamily	gnl\|CDD\|224489	COG1573, COG1573, Uracil-DNA glycosylase [DNA replication, recombination, and repair].	2.93184e-18
CP012375.1\|AOC54080.1\|3297557_3298862_-\|Threonine-synthase	gnl\|CDD\|236065	PRK07591, PRK07591, threonine synthase; Validated.	0
CP012375.1\|AOC54085.1\|3301008_3301965_-\|GTP-binding-protein-Era	gnl\|CDD\|234624	PRK00089, era, GTPase Era; Reviewed.	1.46845e-158
CP012375.1\|AOC54088.1\|3304762_3306442_-\|High-affnity-carbon-uptake-protein-Hat/HatR	gnl\|CDD\|238121	cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment.	4.09906e-81
CP012375.1\|AOC54083.1\|3299638_3300184_-\|16S-rRNA-(guanine(966)-N(2))-methyltransferase	gnl\|CDD\|223813	COG0742, COG0742, N6-adenine-specific methylase [DNA replication, recombination, and repair].	5.57493e-67
CP012375.1\|AOC54090.1\|3307227_3309201_+\|serine/threonine-kinase	gnl\|CDD\|319862	cd16383, GUN4, porphyrin-binding protein domain GUN4. GUN4 is a porphyrin-binding protein involved in chlorophyll biosynthesis regulation and intracellular signaling, found in aerobic photosynthetic organisms. It has been implicated in retrograde signalling between the chloroplast and nucleus. GUN4 can bind protoporphyrin IX (PIX) and magnesium protoporphyrin IX (MgPIX), substrate and product of the Mg-chelatase, as well as heme and cobalt protoporphyrin IX (CoPIX). It may play a role in protecting plants from reactive oxygen species (ROS)-mediated damage.	2.83997e-74
CP012375.1\|AOC54079.1\|3297175_3297451_-\|moaD-family-protein	gnl\|CDD\|340594	cd17074, Ubl_CysO_like, ubiquitin-like (Ubl) domain found in Mycobacterium tuberculosis CysO and similar proteins. CysO, also termed 9.5 kDa culture filtrate antigen cfp10A, together with CysM (Cysteine synthase M), forms a protein complex CysM-CysO that represents a new cysteine biosynthetic pathway in Mycobacterium tuberculosis. The replacement of the acetyl group of O-acetylserine by CysO thiocarboxylate to generate a protein-bound cysteine is catalyzed by CysM in a pyridoxal 5?-phosphate (PLP)-dependent manner. The family also includes QbsE that functions as the sulfide donor for the biosynthesis of thioquinolobactin in Pseudomonas fluorescens. A JAMM motif protein QbsD catalyzes removal of the carboxy-terminal dipeptide from QbsE. Both CysO and QbsE are similar to prokaryotic sulfur carrier proteins such as ThiS and MoaD, containing the beta-grasp ubiquitin-like fold.	1.99102e-49
CP012375.1\|AOC54095.1\|3313218_3313650_-\|FHA-domain-containing-protein	gnl\|CDD\|366133	pfam00498, FHA, FHA domain. The FHA (Forkhead-associated) domain is a phosphopeptide binding motif.	5.73297e-15
CP012375.1\|AOC54087.1\|3303138_3304419_+\|2-alkenal-reductase	gnl\|CDD\|273938	TIGR02037, Probable_periplasmic_serine_protease_do/HhoA-like, periplasmic serine protease, Do/DeqQ family. This family consists of a set proteins various designated DegP, heat shock protein HtrA, and protease DO. The ortholog in Pseudomonas aeruginosa is designated MucD and is found in an operon that controls mucoid phenotype. This family also includes the DegQ (HhoA) paralog in E. coli which can rescue a DegP mutant, but not the smaller DegS paralog, which cannot. Members of this family are located in the periplasm and have separable functions as both protease and chaperone. Members have a trypsin domain and two copies of a PDZ domain. This protein protects bacteria from thermal and other stresses and may be important for the survival of bacterial pathogens.// The chaperone function is dominant at low temperatures, whereas the proteolytic activity is turned on at elevated temperatures. [Protein fate, Protein folding and stabilization, Protein fate, Degradation of proteins, peptides, and glycopeptides].	1.4099e-119
CP012375.1\|AOC54078.1\|3296537_3297005_+\|Protein-of-unknown-function-DUF29	gnl\|CDD\|366774	pfam01724, DUF29, Domain of unknown function DUF29. This family consists of various hypothetical proteins from cyanobacteria, none of which are functionally described. The aligned region is approximately 120-140 amino acids long corresponding to almost the entire length of the proteins in the family. Structure 3fcn is a small protein that has a novel all-alpha fold. The N-terminal helical hairpin is likely to function as a dimerization module. This protein is a member of PFam family PF01724. The function of this protein is unknown. One protein sequence contains a fusion of this protein and a DnaB domain, suggesting a possible role in DNA helicase activity (hypothetical). Dali hits have low Z and high rmsd, suggesting probably only topological similarities (not functional relevance) (details derived from TOPSAN). The family has several highly conserved sequence motifs, including YD/ExD, DxxNVxEEIE, and CPY/F/W, as well as conserved tryptophans.	2.5474e-58
CP012375.1\|AOC54094.1\|3312052_3313198_-\|Aspartate-aminotransferase	gnl\|CDD\|235654	PRK05957, PRK05957, pyridoxal phosphate-dependent aminotransferase.	0
CP012375.1\|AOC54093.1\|3311039_3311912_+\|rRNA-small-subunit-methyltransferase-H	gnl\|CDD\|234597	PRK00050, PRK00050, 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH.	9.01056e-159
CP012375.1\|AOC54092.1\|3309497_3311009_+\|Threonine-dehydratase-biosynthetic	gnl\|CDD\|236417	PRK09224, PRK09224, threonine ammonia-lyase IlvA.	0

>CP012375.1|AOC54087.1|3303138_3304419_+|2-alkenal-reductase
MTHNIFNDNISPSNEGNPKRSKSSAMKKLFAYSSLLVLGAGLGIGATYAYSQNPLELAQNIATAATNPRPSTAAAAAPSTLVIPTNFVASVVQEVGPAVVRINASREVNGGGDFSEFANDPVFRRFFGSQIPERGERQVQRGTGSGFIISNDGKIITNAHVVEGADKVTVTLKDGRTIDGKVLGSDPLTDVAVVQVETGNLPTVKLGNSDSLQVGEWAIAIGNPLGLDNTVTTGIISAKERNGSQIGASDKRVDFLQTDAAINPGNSGGPLLNARGEVIGVNTAIIQNAQGLGFAIPIKTAQRIAEQLIATGKVEHPYLGVQMVQLTPEVKEQLADSPMADNWTIPDDSGVLLVRVMRDSPAAAAGLRSGDVLKSVGGKNVTDPDAVQEIVANTQIGDNLPVEISREGQKINLNIQVGSLNTANKS
>CP012375.1|AOC54086.1|3302021_3302768_+|hypothetical-protein
MLVLILGCSNHLELSMAGNLSDRLTNYPRWMTKPVVSFASGDLVYPDWMVGNWTVTSTLIDLTAPLAPQIITPGFESNRRYLEQSIEFPVRFIEKAMARPINAAFLSTIISKPSIVADRSFNGLAISRAYLGNQSVLSVKTDPNNPNRQITFLRGAHQLISTVIARNSETPSRNQFIATEISQQIFRGETNTYLNEVETTTAYQLLSPNKILGDQVTAIYLSPQSPDYFQAPNRPVALYRYRLELRKD
>CP012375.1|AOC54085.1|3301008_3301965_-|GTP-binding-protein-Era
MNDFINSQAVNLDSAVIPIAPTGFKSGFIGIIGRPNVGKSTLMNQLVGQKIAITSPIAQTTRNRLRGIVTGERSQMIFVDTPGIHKAHHELGKVLVKNAENAINSVDLVLFVVDSSNFLGSGDRYIADLLTKNQTPTILGLNKADQQPEDREPLDDSYRTLAAENNWPLLKFSALEGMGIAELQNLLIDSLEVGPYYYPPDLVTDQPERFIMAELIREQILLQTRQEIPHSVAVVIERVEETPALTRVFAAINVERDSQKGIVIGKNGSMLKALGTSARSAIQKLIAGEVYLKLFVKVEPKWRQSRSLLAEFGYRTEE
>CP012375.1|AOC54084.1|3300187_3300865_-|Uracil-DNA-glycosylase-superfamily
MTDIKTLIKQVHQEAKKEDFPIDTLIYQEAKKDPFEPVLYAGNLASQLCFFGRDLGRDEVYAGQPLIGAAGRMVREGFFQAWQGRKSHDRQELLSVCDQIFLTNTVPYKPPGNKAYSGEVKDRFRPFIEKLLVFYWQGDHIITLGTEAFKWFEPYGKPKEVDKFYLDKERFTKKLLVTLTATDEDGLKQQKKVTLLPLPHPSPLNQRYYALFPDLLQKRLTEFAF
>CP012375.1|AOC54083.1|3299638_3300184_-|16S-rRNA-(guanine(966)-N(2))-methyltransferase
MRIYGNRPIKTLAGQLTRPTTARVREALFNIWQHKLSGCRWLDLCAGNGSMGAEALCRGASLVIGIEQSGRAGEIIKENWRNLATSPQQFQVIRGDVLTKLATLAGESFDLIYFDPPYESGLYLPVLTAISQYNLLDSLGEIAVEHNPKSWPAINLEGLTICRQKRYGNTTLTFYQKTDEL
>CP012375.1|AOC54082.1|3299427_3299628_-|hypothetical-protein
MKWGEGRINKIISCLLSPNPTNKLFQQTLLITSGEWEIWVLPQEMVNFIWQPRKMALLVFVWKEEE
>CP012375.1|AOC54081.1|3298824_3298956_+|hypothetical-protein
MNFEVSMFVARVMIFLSCRQLMYKHPITGKILVSNIPDYFCRV
>CP012375.1|AOC54080.1|3297557_3298862_-|Threonine-synthase
MTLATNIETSKFIPTFTRLVSKEGGTSYPLKALNICEETFAPLEVDYDYDLIRRTVTRESIQAGPNSIWRYRSFLPVESENPIDVGTGMTPLVKSHRLARRLGLKNLYIKNDAVNMPTLSFKDRVVSVALTRAKELGFTTVSCASTGNLANSTAAIAAHAGLDCCVFIPSDLEAGKILGTLIYNPTVMAVKGNYDQVNRLCSEVGNTYGWGFVNINLRPYYSEGSKTLGFEVAEQLGWKLPDHIVAPLASGSLFTKIYKGFQEFVKVGLVADKAVRFSGAQAEGCSPIAQAFKEGRDFVAPVKPNTIAKSIAIGNPADGVYALDIARKTGGNIESVTDAEIIEGIKLLAETEGIFTETAGGTTIAVLKKLVEAGKIDPEETTVVYITGNGLKTQEAVQGYIGEPLLIEPKLESFERALERSRTLERLEWQQVLV
>CP012375.1|AOC54079.1|3297175_3297451_-|moaD-family-protein
MAVKVLVPTPLQQFTKNKATVECSASNVGDLIESLEASFPGIKARLCDEEGAPRRFLNFYVNSEDIRFLDGTKTPLKDGDEVSIVPAVAGG
>CP012375.1|AOC54078.1|3296537_3297005_+|Protein-of-unknown-function-DUF29
MSKTLYEQDFQVWLATTISHLQKREFAALDTDNLIEELTELGKSEKRTLESNLMILLAHLLKLKVQQDAPPSMKDSWYCSIIEHRQRIEKNLRNTPSLKSYLETAIEEAYPDARQVAIKEGKLAQFGVRIPPENDYPQICPFLPEQILDENFYGN
>CP012375.1|AOC54088.1|3304762_3306442_-|High-affnity-carbon-uptake-protein-Hat/HatR
MAKKLDFVIPAVGGVTGANLSACLGNIGLVGGFGGISVGLVGMTGIGILTSSAIYASLQGLETNDHNVGLALGIGSLGGIGIYSTFGGVGVAVKGTAFGVGVGSMAIAGGIVGLGVYGVMKMLSPTYSDNNFYSNLEFFDRITREYEEALFWQEVTGKYENLEAELQQLLEEVSIQENQQLDSTEITIPERLSWQCFQTLKGHQENIGAIDVSPDGKIIASAGEDQTIKLWQRETGKLIYSFVGVNEPIQTLAISPNGKSIIAGGLDGRISQWQLDTKQYKSSFFARVNAPHSHDGVILQLAFAANERFIVSASNDKTLRIWGYHTGELKRTLIGHEEAVNTCAISPDSQIIASGSDDKTIKLWRFDHSYAYQTFIGDRAAVNSLAFSNDGQYLISGGSDKAIKIWDIKTGEMIKSWQAHEQAIISIAINPHRHLIASASRTEIKIWQGQTGELIKILRGTAPLKFSPDGQFLITGSYGDKVKIWSEMLGELEILPPDSEDWWEVLEVSKNASFSEVKQRYYQLARQYHPDHNSSAMAIKIMQKINRAYERFLFSISQQ
>CP012375.1|AOC54089.1|3306395_3306662_+|DNA-gyrase-subunit-A
MTPPTAGITKSSFLAIFLRNNQVSHRVSPIEFSLVWYRRLTPQSGTFPSCPLPTASFKSVPMKKFSPPQMKEVSFPTPLGLIQGRVDS
>CP012375.1|AOC54090.1|3307227_3309201_+|serine/threonine-kinase
MSLCLNPDCSHQNTPTDKFCHKCGSQLLLRERYRALKLIGQGGFGKTFQAIDEDKPSKPYCVIKQFFPSAQGTETLQKAAELFKEEAIRLDSLGRYPQIPELYAYFTGNGGRQYLVQEYIEGQNLEQELKQEGVFNEAKIKHLLSEILPILEFIHSKQVIHRDIKPENIIRRKSDNKLILVDFGAAKFVSPLNRSMTGTIIGSAEYIAPEQGNGKAVNASDLYSLGVTCLYLLTGISPFDLFDGGEHQWVWRQWLVNNPVSNDVVNILDKLIEFGTKKRYQSASEVLQALQIKTSVSIPQTNIQKPVNPVISVTQTPPSIQLKSAKGIDYRNLEDLLKQKRWKEADEETANLVRKVTNRVKDWLRDEDIQKFPCEDLRTIDQLWVYYSNGKFGFSVQGQIYREIGGMEEYNERNWDIFGSLVGWQKNNSWNWQDINYSLQAPQGHLPLIRYGYKGQGSYIIYHLTSRIFVCQTSSHQIINQKQPVATIIQPPIISVPQTPPSIQLKSAKGIDYRNLEDLLKQKRWKEADQETERVMLQAAKRTKERWLRKEDIDKFPCEDLRTIDQLWLKYSNGKFGFSVQAKIYHDLGGTQEYNDKIWNAFGDKIGWRVRVGFMKNSWIYYKDVTFDLKAPQGHLPFEKWKNNWRSLFSRVETCKM
>CP012375.1|AOC54091.1|3309231_3309345_+|hypothetical-protein
MYRRENQMLEITKNYVLDEDQKLIAVKILIAEFEKIA
>CP012375.1|AOC54092.1|3309497_3311009_+|Threonine-dehydratase-biosynthetic
MYCDYLVQILTARVYDVAQETPLEFAPNLSQRLHNQLLLKREDMQSVFSFKLRGAYNKMAYLSRDLLQKGVIAASAGNHAQGVALGARQLGTQAIIVMPVTTPQVKIDAVKARGGIVVLHGDTYDDSYTYARQLEAEKGLTFIHPFDDPEVIAGQGTIGMEILRQYQQPIEAIFVAIGGGGLISGIAAYVKRLRPEIKIIGVEPVDSDAMNQSLKAGYRVRLSQVGLFADGVAVREVGEETFRLCQQYVDEIILVDTDDICAAIKDVFQDTRSILEPAGALAVAGAKAYVEREGIEDKTLVAVACGANMNFDRLRFVAERAELGERREALYAVTIPEQPGSLRRFCECVGKRNLTEFSYRIADEKEAHIFVGAQIENRSDAKKLAESFEACGFKTLDISDDELTKLHLRHMVGGRSHLADYELFYRFEFPERPGALMKFVASMSPHWNISVFHYRNNGADYGRIVVGIQVPPDEMNQWQAFLDTLGYRYWDESQNPAYQLFLG
>CP012375.1|AOC54093.1|3311039_3311912_+|rRNA-small-subunit-methyltransferase-H
MNQDFPHISVLSQELIAGLNIQPGGHYLDLTLGGGGHSRLLLEAHPETTVTAIDRDQSALEAAKISLAPYLDSRLTLWWGNFADYKGQNSSFDGIIADLGVSSPQFDQSERGFSFRHTAALDMRMDRCQSLTAADIINHWQEKELADLFYQYGEERLSRPIARSIVQKRPFTTTTELAAVIASSVPASYRYGRIHPATRVFQSLRIAVNQELDSLQKLLDQAPHWLKSGGIIAMISFHSLEDRLIKYGFREDNSLKIITKKPIIPSREEQAKNPRSRSAKLRIAQKISCS
>CP012375.1|AOC54094.1|3312052_3313198_-|Aspartate-aminotransferase
MDGVQTPIIPVVGQLIKANPGTISLGQGVVSYYPPQEALESLSLFLANPKNHQYQSVAGIPPLLAVIRQKLAEDNRIEISDKQAIFVTAGSNMAFMNAILAITSPGDEIILNTPFYFNHEMAIKMADCQVILVATDKNYQLRPAAIEEAITEKTKAVVTISPNNPTGVVYPENTLREVNRICQKKGIYHIHDEAYEYFTYNHARHFSPGAIVGSESWTISLFSLSKAYGFASWRIGYMVVPEHLSEAINKIQDTILICPPVVSQYAALGALQVGKSYPLEQLKTISQVREICLNALESIGDICDVATAEGAFYFFLKITTDKNDFQLVKSLIERQRVAVLPGSTFGITEGCYLRLAYGALSPETALTAVERLVKGLRYFSQ
>CP012375.1|AOC54095.1|3313218_3313650_-|FHA-domain-containing-protein
MDSSSTLLGSIDYFNKKPLKKVSKAFLLHEETGTLLEISGRKNRFYLGKVNPKVTVDLDLSHLPDAKIVSRVHAIIYVEKEGFYLEDAGSLNGTYLNGENLQSGRKKLKSGDRITLGYYRAINLLFEIESAHPPQYTFKSLAN
>CP012375.1|AOC54096.1|3314053_3314167_+|hypothetical-protein
MAQLGFFRSSQGLEPVQMGKKVFIADFWENYPIFALD
>CP012375.1|AOC54097.1|3314275_3314740_-|hypothetical-protein
MATATQFLNISDLTKDDYCVFGLAICFLKQEGELEKVAVLEPIPSAALEAIVKGIPTSYEFARAMALGEVFQDDNPQIPSNFPDNTQLCENFVERAIAATRTYKNQPHLQGLIPLGGQKDGLNFSLEKKRILNAVHVVRTEDNVKQHSHTHKVL

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Crispr_ID: CP012375_18

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP012375_18

3543027-3543128

Orphan

Consensus_repeat	Method
AGAAGCCGATACTTCCCCCATTGTCCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP012375_18

>merge|CP012375|18|3543027-3543128|CRISPRCasFinder
AGAAGCCGATACTTCCCCCATTGTCCCCAGAATCGAGAAACACATCGAGAAAACAAGCGAGAGTGTTGCCCTGAGAGAAGCCGATATTTCCCCCATTGTCCC

>CP012375|18|17|3543027-3543128|CRISPRCasFinder
AGAAGCCGATACTTCCCCCATTGTCCC	CAGAATCGAGAAACACATCGAGAAAACAAGCGAGAGTGTTGCCCTGAG
AGAAGCCGATATTTCCCCCATTGTCCC

Protein	Signature genes	Signature genes Name	Protein_function
CP012375.1\|AOC54345.1\|3538165_3539194_-\|Putative-type-IIS-restriction	unknown	unknown	unknown
CP012375.1\|AOC54356.1\|3563789_3564251_+\|hypothetical-protein	unknown	unknown	unknown
CP012375.1\|AOC54347.1\|3540589_3541642_+\|Membrane-bound-metal-dependent-hydrolase-YdjM,-induced-during-SOS-response	unknown	unknown	gnl\|CDD\|377294
CP012375.1\|AOC54342.1\|3533567_3534518_+\|Proline-iminopeptidase	unknown	unknown	gnl\|CDD\|130316
CP012375.1\|AOC54348.1\|3541634_3542729_+\|Bipolar-DNA-helicase-HerA	unknown	unknown	gnl\|CDD\|223510
CP012375.1\|AOC54355.1\|3561840_3563490_+\|hypothetical-protein	unknown	unknown	unknown
CP012375.1\|AOC54343.1\|3534523_3536194_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226428
CP012375.1\|AOC54352.1\|3548391_3551202_+\|Superfamily-II-DNA/RNA-helicase,-SNF2-family	unknown	unknown	gnl\|CDD\|350769
CP012375.1\|AOC54354.1\|3555592_3560938_+\|Helicase,-C-terminal:Type-III-restriction-enzyme,-res-subunit:DEAD/DEAH-box-helicase,-N-terminal	unknown	unknown	gnl\|CDD\|350681
CP012375.1\|AOC54357.1\|3564350_3564956_-\|Abortive-infection-protein	unknown	unknown	gnl\|CDD\|376806
CP012375.1\|AOC54339.1\|3531211_3531946_-\|D-alanyl-D-alanine-carboxypeptidase	unknown	unknown	gnl\|CDD\|367124
CP012375.1\|AOC54351.1\|3546463_3547960_+\|transposase	unknown	unknown	gnl\|CDD\|290319
CP012375.1\|AOC54349.1\|3544206_3544845_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|367035
CP012375.1\|AOC54353.1\|3551239_3555235_+\|putative-restriction	unknown	unknown	gnl\|CDD\|380293
CP012375.1\|AOC54340.1\|3531977_3533369_-\|NADP-dependent-malic-enzyme	unknown	unknown	gnl\|CDD\|223358
CP012375.1\|AOC54344.1\|3536257_3537208_+\|Mobile-element-protein	unknown	unknown	gnl\|CDD\|315923
CP012375.1\|AOC54358.1\|3564952_3567286_-\|Adenylate-cyclase	unknown	unknown	unknown
CP012375.1\|AOC54341.1\|3533407_3533545_-\|hypothetical-protein	unknown	unknown	unknown
CP012375.1\|AOC54346.1\|3539584_3540361_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379165
CP012375.1\|AOC54350.1\|3544952_3545354_+\|Mobile-element-protein	unknown	unknown	gnl\|CDD\|226202

Protein	Function_ID	Function_description	E-value
CP012375.1\|AOC54352.1\|3548391_3551202_+\|Superfamily-II-DNA/RNA-helicase,-SNF2-family	gnl\|CDD\|350769	cd18011, DEXDc_RapA, DEXH-box helicase domain of RapA. In bacteria, RapA is an RNA polymerase (RNAP)-associated SWI2/SNF2 (switch/sucrose non-fermentable) protein that mediates RNAP recycling during transcription. The ATPase activity of RapA is stimulated by its interaction with RNAP and inhibited by its N-terminal domain. The conformational changes of RapA and its interaction with RNAP are essential for RNAP recycling. RapA is part of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	2.04533e-61
CP012375.1\|AOC54347.1\|3540589_3541642_+\|Membrane-bound-metal-dependent-hydrolase-YdjM,-induced-during-SOS-response	gnl\|CDD\|377294	pfam04307, YdjM, LexA-binding, inner membrane-associated putative hydrolase. YdjM is a family of putative LexA-binding proteins. Members are predicted to be membrane-bound metal-dependent hydrolases that may be acting as phospholipases. It is a member of the SOS network, that rescues cells from UV and other DNA-damage. Expression of YdjM is regulated by LexA.	1.17127e-21
CP012375.1\|AOC54342.1\|3533567_3534518_+\|Proline-iminopeptidase	gnl\|CDD\|130316	TIGR01249, Putative_proline_iminopeptidase, proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.	9.59131e-156
CP012375.1\|AOC54348.1\|3541634_3542729_+\|Bipolar-DNA-helicase-HerA	gnl\|CDD\|223510	COG0433, COG0433, HerA helicase [Replication, recombination, and repair].	3.34957e-09
CP012375.1\|AOC54343.1\|3534523_3536194_-\|hypothetical-protein	gnl\|CDD\|226428	COG3914, Spy, Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones].	4.60117e-153
CP012375.1\|AOC54354.1\|3555592_3560938_+\|Helicase,-C-terminal:Type-III-restriction-enzyme,-res-subunit:DEAD/DEAH-box-helicase,-N-terminal	gnl\|CDD\|350681	cd17923, DEXHc_Hrq1-like, DEAH-box helicase domain of Hrq1 and similar proteins. Yeast Hrq1, similar to RecQ4, plays a role in DNA inter-strand crosslink (ICL) repair and in telomere maintenance. Hrq1 lacks the Sld2-like domain found in RecQ4. Hrq1 belongs to the type II DEAD box helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	5.75022e-64
CP012375.1\|AOC54357.1\|3564350_3564956_-\|Abortive-infection-protein	gnl\|CDD\|376806	pfam02517, Abi, CAAX protease self-immunity. Members of this family are probably proteases (after a isoprenyl group is attached to the Cys residue in the C-terminal CAAX motif of a protein to attach it to the membrane, the AAX tripeptide being removed by one of the CAAX prenyl proteases). The family contains the CAAX prenyl protease. The proteins contain a highly conserved Glu-Glu motif at the amino end of the alignment. The alignment also contains two histidine residues that may be involved in zinc binding. While they are involved in membrane anchoring of proteins in eukaryotes, little is known about their function in prokaryotes. In some known bacteriocin loci, Abi genes have been found downstream of bacteriocin structural genes where they are probably involved in self-immunity. Investigation of the bacteriocin-like loci in the Gram positive bacteria locus from Lactobacillus sakei 23K confirmed that the bacteriocin-like genes (sak23Kalphabeta) exhibited antimicrobial activity when expressed in a heterologous host and that the associated Abi gene (sak23Ki) conferred immunity against the cognate bacteriocin. Interestingly, the immunity genes from three similar systems conferred a high degree of cross-immunity against each other's bacteriocins, suggesting the recognition of a common receptor. Site-directed mutagenesis demonstrated that the conserved motifs constituting the putative proteolytic active site of the Abi proteins are essential for the immunity function of Sak23Ki - thus a new concept in self-immunity.	3.73846e-05
CP012375.1\|AOC54339.1\|3531211_3531946_-\|D-alanyl-D-alanine-carboxypeptidase	gnl\|CDD\|367124	pfam02557, VanY, D-alanyl-D-alanine carboxypeptidase.	2.74612e-58
CP012375.1\|AOC54351.1\|3546463_3547960_+\|transposase	gnl\|CDD\|290319	pfam13586, DDE_Tnp_1_2, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis.	2.0941e-34
CP012375.1\|AOC54349.1\|3544206_3544845_+\|hypothetical-protein	gnl\|CDD\|367035	pfam02321, OEP, Outer membrane efflux protein. The OEP family (Outer membrane efflux protein) form trimeric channels that allow export of a variety of substrates in Gram negative bacteria. Each member of this family is composed of two repeats. The trimeric channel is composed of a 12 stranded all beta sheet barrel that spans the outer membrane, and a long all helical barrel that spans the periplasm.	7.29366e-06
CP012375.1\|AOC54353.1\|3551239_3555235_+\|putative-restriction	gnl\|CDD\|380293	NF033451, BREX_2_MTaseX, BREX-2 system adenine-specific DNA-methyltransferase PglX. This protein, PglX, is a site-specific DNA methyltransferase associated with PGL (phage growth limitation), a type 2 BREX (bacteriophage exclusion) system. The phage resistance appears not be restriction, but does manage to inhibit phage replication.	1.0916e-08
CP012375.1\|AOC54340.1\|3531977_3533369_-\|NADP-dependent-malic-enzyme	gnl\|CDD\|223358	COG0281, SfcA, Malic enzyme [Energy production and conversion].	0
CP012375.1\|AOC54344.1\|3536257_3537208_+\|Mobile-element-protein	gnl\|CDD\|315923	pfam13358, DDE_3, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	5.35977e-40
CP012375.1\|AOC54346.1\|3539584_3540361_+\|hypothetical-protein	gnl\|CDD\|379165	pfam13401, AAA_22, AAA domain.	3.82126e-07
CP012375.1\|AOC54350.1\|3544952_3545354_+\|Mobile-element-protein	gnl\|CDD\|226202	COG3677, COG3677, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	2.7415e-13

>CP012375.1|AOC54348.1|3541634_3542729_+|Bipolar-DNA-helicase-HerA
MFNKQQKPLPTAVLQATNSPSDESSPPSGILLGDNCYWNPGHLPNGHIVAIGASGSGKTQTLKAIAYSLRQTYPDIQLFIIDFHGDQEIIGETCYPLHMASSHGINPLIVNLDAEGGGPHLQAIAVTTTLKRSLQLGPNQEGLLLEILQFCYNRRGISQEQPTSWTREAPNFTDLQQEIESRVESGCKESQKLKLKLIATFTYGVFCRPQPNFTEKHIRIDLSKLPPEIGAIAAESLAWQLMNRHRLLGEIEGKLPRTYLFIDEAKELRKSRACDRIIADGRKYGLGLVLASQSERHLSDDVIGNSSTKIVLPVDQSEVKRVAAKFRFAEKKVAELVPLTALCRFGKQAEVTSIFPYHRRVKDG
>CP012375.1|AOC54347.1|3540589_3541642_+|Membrane-bound-metal-dependent-hydrolase-YdjM,-induced-during-SOS-response
MMSVTHIAFSVALTSITLGTANPEILGIAAVAALLPDVDTGKSSIGRLLFPVSGWLEKRTVHRGITHSFFASGVVTLAAYPLALLGYSQLWYGLILGYFFGWFADVFTKSGVQAFYPGRGRMIIPRNPRLRLATGSNAEWFLLFVLVVVSVMSISINSGGGLIRGFNQVLGLPSGAIETVNEDASRYLLRVRVQGRNAITEQPIDATYEVIEPLTVSDLLVKDEGGTVYRLGSSQESQIIASRIRVERVAPVQVKIENIVLEDEYLDRLANLTEPFGVAQGNRVYLTGTLTIADGSGLSLPSHADRFDTITLQPGHVAYARLTAASPQYVIDKLGEYSVSGHLIARIINV
>CP012375.1|AOC54346.1|3539584_3540361_+|hypothetical-protein
MAALLANASLLVVGEDGAGKTFLAERVIEDLWGRGFPVAAPAIGTVKQMLLEIAGDLGVDTETLEGKPMTAQQLQETIAEWLEGNVAFLVMDNAHRFPVSLRCWLEKLHLQGQPILLLATYPPARDIFLKLPRIELEALPERAIREIMEGEAVSLGLQVTPGKLADWQQRAIGNPMLAKRVVKEEYLGLEGNNYDHTQWIDGTPLLIAVLMCFMILRFLGLGFNNTSLYLIGGILTVAVGMVRLMIYSLPRQSNRLGR
>CP012375.1|AOC54345.1|3538165_3539194_-|Putative-type-IIS-restriction
MEVGEMPERLLRLDDLKTLTSPDGVAALFHRLGYDAEAQPLNLEDLQLTSRSAEAVYDAYLIADQGNGGLQVLLFQLQPEEWSSPSVASSRMKAIASQVGRRDTEFLLLATKDYNQLMLVNPRKSFDDKMNLKASIRKLLIDRTNPTAYDLDRLEAIAVRDKSPQELYKVQCEAFDVEKLTKSFYRGYKQLFDQVQQAVKLHNDHPYFEDSDRLHQFSQRLLGRIMFLYFLQKKEFLAGDRRFLTTQYKHLRPDPDDTEYYTSVLEPLFFQTLNQQRPNLDSKWGKIPYLNGGLFDRIIIKIKFKPGKRLYLAIDRTQWKDKNLFMVAGIIERRAIDISKNL
>CP012375.1|AOC54344.1|3536257_3537208_+|Mobile-element-protein
MRPYSVDFRQKIIDVWKKEKISIRGLAQRFDVAKSFIQKLLKQHKETGDIRPRPQGGSPPTKLNSEQLIILIEIIESNNDATLEELSDLLYEKTQVKVSRATLGRLTQKLNYSFKKKTLHAAEKESDRVQQKRVEYWSQVREIEASKLIFIDESGVNLALLRLYARALIGRRDRGRKPQKRGRNISIISAISLEKVVASVNIYGAVDAVTFEGFILKEVLPKIKEGDCLLMDNAKIHLGEMVREIIEQEKARLIYLPPYSPEFSPIENFWSKVKAILRKLKARTYKDLIEGIELAMLEVTQKDIRNWFTHCCYCTS
>CP012375.1|AOC54343.1|3534523_3536194_-|hypothetical-protein
MLYTIHFLELAALHINNPEIIAAKVISAIVNYAYQQKQSVFAINLVELCLRFLPEDLYLQNSLFNLYKTTTVDYKKALEIADNFYKSCQTTTEKLLGISLVIAISQAKGDWGNLPKFIDELIQLIERQINAKQFNARPFIIDSILGVTICLPYYQDNPKINRYLQSKLAEIFQADVRIRYNYIAPVSSPKSPARKIKIGYIAYTLRRHSVGWLSRWLFHYHNRDKFEIYTYFVNQAADEITEKWFINNSDYSYNLPAKIEQITAQIRQDNLDILVDIDSLTNNTTCLVMALKPAPIQVTWLGLDASGIPAIDYFIADNYVLPENAEEIYSEKIIRLPNSYLSVDGFEVGVPTRRRTDLNIPDDAIIYLTVQSGLKRTLNMIYLQLQILQQVPNSYLLIKGFADKETIRELFLKSADELGISQDRLRFLPNDFNEETHRANLVIADIVLDTYPYNGATTTLETLWMGIPLVTRVGEQFAARNSYTFMKNAGISQGIAWSDEEYVQWGIKLGLDQNLREEIRYQLRQSRHRSPLWNGKKFTLDMEKAYEQIWQNHHDN
>CP012375.1|AOC54342.1|3533567_3534518_+|Proline-iminopeptidase
MTRELYPAINPYCTGYLKVSALHTIYYEEVGNPQGKPVVFLHGGPGGGIEGIYRQYFDPQKWRIVLFDQRGCGKSTPHAELRENNTWLLVADIEKLRELLKIERWVVFGGSWGSTLSLAYSQTHPERCLGLILRGIFLLREKELKWFYQEGTSYIFPDIWQNYLAPIPPEERGDLLAAYYRRLTSDNPQIRLEAAKAWSIWEGSTSKLIPADNLIERFGQDNFAEAFARIECHYFVNKGFLETDNQLIENVDKIRHIPAVIVQGRYDIVCPMISAWELHQAWTEAEFIIVPDAGHSMTEVGIRSALIEATDKFVNL
>CP012375.1|AOC54341.1|3533407_3533545_-|hypothetical-protein
MKSNLICHLPSPHTPHPTPRSPGIRPRETLIAKETARLDTKVSHR
>CP012375.1|AOC54340.1|3531977_3533369_-|NADP-dependent-malic-enzyme
MVHLTPNPSYSLSLKIEIPNQAGTFASVLNAIADVGGNLGQISLIERNLKISTREVMVDAASTDQAEQIIAAVKALPDVKLLKVSDRTFDLHRRGKISIESRIPLTSQDDLAMAYTPGVGRICTAIAHQPELVYSLTIKGNTVAVVTDGSAVLGLGNLGPEAALPVMEGKAMLFKEFAGIDAFPICLATQDPEEIIATVKRIAPVFGGINLEDIGAPRCFEIEKRLRAELNIPVFHDDQHGTAIVSLAALINALKFVKKSLDTVKIVINGAGAAGIAIATLFKTAGATDIILCDSHGILSQQRDDLTPEKQAWAVAASGKLGDALKGADVFLGVSAPGVLTPEMVKGMAKNAIVFAMANPIPEIQPELINDLVAVVATGRSDYPNQINNVLAFPGLFRGALDCRARAITDNMYLEAAKAIASLITPANLDRENIIPSVFDGRVVTAVAAAVQQAARQDGVAGE
>CP012375.1|AOC54339.1|3531211_3531946_-|D-alanyl-D-alanine-carboxypeptidase
MKPIDDIPEALRDNQYRKTTNPNGLIAIASGLLALVGTGLIAIAVLNRPPASVKKPVINPSPLIKATPSPIENILGHLPYQEAPETELAPITGDGAMRLRKAAAKAFIQMQSDARRSGVILMPISAFRSKATQEKLFFEVKKQRNQQTRKRAEVSAPPGYSEHHTGYAIDIGDGRAPATNLSSSFANTAAFRWLQNNAAQYSFELSFPENNPQGINYEPWHWRFVGDSHSLETFYKAQQLGKQK
>CP012375.1|AOC54349.1|3544206_3544845_+|hypothetical-protein
MTPLQAAPLPCLDSGNDCLRTLTEAAIERSPELQTLDERIALIDRRLQLAGQRIDQANARQWTGYLTTDPIAILQNLFGGGQVQQQRMAITDLEIRAADLEAARAELERQRAAKRSQLGEQVLTLVIAYETAGDRERAILAQLSNHDLLTRITEIDYRLGGSSTETYLTRIAQREQLEIQWNRYRLERETAKRQLLSLTGFSTPETTGETTG
>CP012375.1|AOC54350.1|3544952_3545354_+|Mobile-element-protein
MEEIKMQCPECKSTHIRKNGINKQGKQNHICVTCGRQFINNYEKQKGYDEKTKRECLTAYVNGMGFRGIERLKGVHHTTVINWVKSVGELLPVAYDPETIPEVGELDELETFVGSKKTKSGCGQPLTTLKKEF
>CP012375.1|AOC54351.1|3546463_3547960_+|transposase
MYRKSELPSTPPENFELPFEGKLSQDNRWVIMANLIPWSEFEAEYASLFSEEMGTPAKTFRTALGALIIKEKLGTSDRETVEQIKENPYLQYFLGFSSYSNEPRFEASMLVHFRERITLELINKVNRFMVKNSREIKEEENTEKKLESETQSQPENRGKLILDASCAPADISYPTDLNLLNQGRKQTEKIIDILYETLKGKLVQKPRTYRLLARKSYLEVAKKRKPTVKQRRKALKRQLQYLKRNLDHIEQLLAEGASLQSLKKRDYKLLLVVTEVYRQQLWMYQNNKQSIEDRIVSLTQPHIRPIVRGKAGKPVEFGAKFSASCIDGYIFLDRISWDNFNESGDLKAQIEAYYDYTGYYPESVHVDKIYRTRENRAWCKERGIRISGPPLGRPAKNVSKEQKKQATDDERIRNCIEGKFGQGKRRFSLGKVMAKLPHTSFSAIAITFLVMNLSNLLRQVFWAFLCLKWKNSTFSRSMIRISYNLKINQQLKLMLVAK
>CP012375.1|AOC54352.1|3548391_3551202_+|Superfamily-II-DNA/RNA-helicase,-SNF2-family
MRCRNRQWVVLPSEREEVIILRPLSGSEEQICGIYTVLGEKIESATFSPPEPQTLRDHEAGRLLLDAARLSLRSGAGPFRCLGRLSVRPRPYQIVPLLMALRQETVRLLIADDVGIGKTVETALIARELLDRGDIQRIGVLCPPQLCDQWQRELKQKFNIDAVVIRSGTVAKLERELPSGNSHIFSYYRHIIVSLDYAKSDRRRASFLAHRPDLVIVDEAHTATQSKEGANQQRHQLVSKLAENPDQHLILLTATPHNGIETSFLSLLGFLKPEFSTFQLDALSEKQRAELAKHFIQRRRADVQDWMAENTPFSIRKSIEYPYQLSNEYRELFDRVFDFVRGLVRSVDESLSHAQKRGRYWAALAIIRCVMSSPAAAIATLSRQADKNANLDDLAEKTRDESVEDIDRVASPYVYDVTEEELSVDSTPTALVEQSIRTYPDSARKRLRDFARAAEQLTSKKDQKLQYTLKIVKELLTEGYNPILWCRYIATANYYAQALKAEFVGKRGVQPRVIAITGELSEDEREIRLDELKSCPQRVLVATDCLSEGINLQEHFNACCHIDLPFNPNRLEQREGRIDRYGQTTPQLKCILLYGPDNPVDGVVLDVLLRKAVTIHRNLGITVPIPMDSATVQEAIFQSLFERSTTVRQLSLFDSNPALASLHQDWEKAKEKEIQNRTRFAQRSIKPEEVQQELNESDEILGNEADVERFVRNALDRWEISLVKKKVGWQLSRIPDCLEIENRPRTIAFTTPVAEGVEYVGRNHPLVEGLARYLFEEALESSHSIAESSSPPLASRCGVTVTNAIAKPTFILLLRSRLLLTGRNTRPLLAEECLARGFTGTPERPCWLSGTETLALFDTVVPTTDISQEEKREWIEMVIDRLEDLTPSLTEIATERAETLLASHRRVRRFTGEGMLQKVEPQLPMDILGVYILLPP
>CP012375.1|AOC54353.1|3551239_3555235_+|putative-restriction
MNNAAAYRIAGNLLASDMTTEIASGEKDGQSNIHFGLERSIKLEDEIAFVWGEAKDQWQIFQRRLKRLGESDTGTSTTREFWVIPLLKLLGYQPVLQERAETVDGQTFAISHRAGFGDGTGDLSPLESPPVHIVSCKQSLEQRPPSGRPRLSAHALVQEYLNRTEHLWGVVTNGLRWRLLRDCSLMTRLTFIEFDLEQIVQNENYAEFCLFYRLFHRTRLPWGVEDVDSCFLEVYHQDALEQGGRVRERLRDGVEQALLLLGTGFLQHRQNQRLREAINSRELSERDYYRSLLLLIYRLLFLMVAESRNLLLAGEDEGKARIYSEYYSVFRLRALAERKSYLREGFQDNWQGLRVTFSLFDESWRGELLGLSPLNGDLFGSNSLKLLEDLAIDNHDLLLAIRHLSLYENRGQLRRVNYAALDVEELGSVYESLLDFTPRIVNESVSYRFLLVIGSDRKTTGSYYTPPALVGQLIKSALEPVIADKLKGKESPEDKEKALLSLTVCDPACGSGHFLLAAARRIGKELARVRSGEDQPSPEEIGKATRDVIQNCIYGVDLNPLAVDLCKVALWIEGFCKGFPLNFLDHRIKCGNSLVGVMDLDVLKEGIPDEAYKAVTGDDKSLATKLKKSNKEQCKVPKGQLSLFQDIDFEVRQGNYAEGSRDLNRITDSTPSEYHRKQERYEELRADSQWWQDFSACNLWTAAFFMPLTEANLQLIPTTEALRRLLREAEQRQQRNPLQGSLFADGETSSSTPFSVTRIVEAANNLAREQRFFHWCLEFPEVFAEGGFSCVLGNPPWELLQIAEKEFFASKDESIANEKDSSKRKKIIQQLVKTNPRLLQVFEDTKHNADAQNKFIRESGRFLLTTRGKINTYSVFTELAKNLMSSQGKSAVIIKSGIATDESNKDFIQNVVNNCLVTSFFDFTNKEFIFKDVKDTVSFSILTLSNTPCSHVYFASQLRNLNQLKNPLKLYGLSSDEIRLFNPNTLNLPIFQSIEDLKLVRKIYQKVPVLSNLKKKENHWKAFFRQGLFNMTSEREIFWIESELITNNFNLKRNVYFKENIIYLPLYESKNTDQYNHRFAGFEGIKEEERYRNRPPINEANQQQLANVTWQITPRYWVQNQSVDLKIPEQWKYNWLIGFRNAINAFADSRSVRFTLIPKCGVGNSMPLIFSEEKPKMLCCLVANFNSLILDYVAKQKASGGNLNFYVVKQLPIIPPNWYTSEDIEYISDRVLELVYTAYDIRPFAEDMGYYGEPFIWDEDRRAKLRAELDAKYAKLYGLTRDELRYILDPADVYGEDFPSETFRVLKNNEMKKYGEYRTRRLVLEAWDSMK
>CP012375.1|AOC54354.1|3555592_3560938_+|Helicase,-C-terminal:Type-III-restriction-enzyme,-res-subunit:DEAD/DEAH-box-helicase,-N-terminal
MILKDLLAGGIPAITATSTFIGMGMLPQKLNANGVDTLTEEQIEALFSNIPADWSFSDLAERVFDESTVSESLADRLIAYIDQKHGGEPLTPEPRESSQPEEDRPQKFDIFTLRDEIVEDYRGYIESFLSIKDKRIKEFVNRELDRGQLWKDPLVQLNPPYKRGATVGQLIGRGILHQDCDRYFPNFTFFEHQETAFQLARQNLPYVVTTGTGSGKSLTYVVPIINDILENPTLQGVRAILVYPMNALINSQEEEFKKFLENIPDSPIKVAKYTGQESLTEKAEIQNNPPHILLTNYVMLELMLTRVHEDKLVASPDLKFLVLDELHTYRGRQGADVALVIRKLKRRCGKSLVCIGTSATMSTEGDRADRKRTVAEVASKLFGVEIPPNRVIDETLERAISRPDPTVAELQQSLQQEVSPEEEQTDEAFQQHPLVAWIEMNLGLEEEDGYLKRRTPISLKEAADQLAKLTKIDTGVCLDRLREMLLWSGRLNASKTKNSREVRGLPFRLHQFISQGGSVYATIEPHERRELTLEGQYRTTRDRLLFPIVFCRECGHDYYVVRYDSEKYQITPLIPTAIDEENDKDITEGYLTLDEPDLWDINDEERLPDTWFNLNKSGRKVKKDFAKFIPRELYVYPDGRIVTGAFSTDDPIQPVRCWFIPKPFLTCLNCGVVYDRKTTEYRKLSRLSSEGRSTATTLLCLSTVNRLKLNLNIQETAAKILSFTDNRQDASLQAGHFNDFVQTSFLRGSLNRALQNHGYLTHAELAAKVVNAMGLTQEQYAEQPVTFGTGKTRNEKAFEDLIQYRLYDDLKRGWRIVQPNLEQSGLLAIEYPDLENNCQNLAPWQKYPHPVLVSATPEQRLKAASFLLDHLRKNLALDADLLQSNRLNELQRRVNQALNQAWKFDDHEYLPPATKASHLNNPRSGATVKLTAKSKVGKYLRSEQLWGHKVTEAEYESLIVSLINALADSGYLKREGTEIQLRVDSMVWKAQKVDRVKLDPTVRKLRDSLLEEREVNAYFQNFYDRQATTIRKMEGREHTGQVANDKRQEREEKFRKGELAALFCSPTMELGIDISDLSIVHLRNVPPSPANYAQRSGRAGRGGQEALVITYAAYGNGHDQYFYNRQAQMVSGVVVPPKLELANPDLVKSHLYSLWLSYTGVDLGNSMNQILDLEKDGYPIKDGIWQQLKLSSNKLNLCWDDARTILGDVYCQGDLAQTNWYSADWLKQTLENASDEFHNTCNRWRRLYREATEQLQKARETIDRAVRGGVTDEEKKKANVSEEDAKRQRDLLVGSDRKGRSQSEFEFYPYRYFASEGFLPGFNFPRLPVRGFIPAGNKGEFISRPRAVAIRELAPRNIIYYEGSKFQIARTRISPQGEQQFRRISACSRCGYFHADTEANRDTCENCGARLQDRLYHVLVLDTMITRRRERITCDEEDRLKYGYILTTHFRYDSHKRRKALVTAADSTELLKISYGETASIRRINRGLRFNQERGFRLDTAKGEWLDAKQDNPSSNSQAGISLMVEDTRNILVVEPCWGKADLAPEFLITFQHALARAIQAHYKLEAEELASEKLGEGGYILFWESAEGGAGVLAQILDNPTSFQNLAQQALDICHFKQDKPDCAQACYECLLSYQNQFDHPYLNRHLIKDFLEQLAGSRLSFSQEGDREQSYQILLQQSDPNSEYEKVVLKAIYEQGLPLPDRAGVYIPDADCKPDFIYENLKIAIFCDGSVHDHRDQQEQDRVKRENLKWHARYKVFSFNYQSDLQEQIDKLQAMLSPT
>CP012375.1|AOC54355.1|3561840_3563490_+|hypothetical-protein
MSNVKIRLNFTTNLFTGILITFGIAISGIISQNSAVMATNIDNRITPNLSKTTKKTVAICIFGFCVDTPSLPTQIQNTIEQGASSIILQQFRSFLSNEIPISGTEHKLYPVTYSLFGEAFLPSKLYLNHFKDSHFIQSGDYQIPAHFYCTHVYTFNGSGNRYRLAKINGKMSQALSALYKRASLSEVPVQDIQKLSWSIQTGVSYHKLPESSQILVDQLIPEYRQNMNDSFMTNTINFYDNLSRQFSLPSLDKFLSNLGEIGTLVKALLRAREQVINTRLDYSTLANSFVIQQNLNLMGGIESTPWSQVNEQLYLRLIAPQGAMNDGIIQVRILRTNKQSKKVTSHRLFAMNTDINSFKLLTVNDNSVSSLPTAGELRNIISQLIGIPEANGHQAITASILSPPEIMSRTDRLGALQATKEFKPGTVGYGVYKAIEALYYGNEFLGGYGAFANKYSAEIGAFFQRSDIQELMKQPINSQANLLVAKAEFDYWTFVQNNPRSTAEDKEGARIALKFSPEVRAKLQVYYANGDYTRANLLIIKNYPGIIFH
>CP012375.1|AOC54356.1|3563789_3564251_+|hypothetical-protein
MLGQLFIASPILKNSDDKQILEEPKLVLTRNKKYAEYEGQLVAPGHGNQNYKIIRIDTTNFITGGTLRIDIQVGSGQSQASFDLFAEDAVIPIAGRPQQSLAGAYDISPDSGTSLTYKFDKGEVFQFGATGNWFSPKGSRNSYRIKAYVIPKI
>CP012375.1|AOC54357.1|3564350_3564956_-|Abortive-infection-protein
MKLLSSSQITTSVVISFLYILPVVLILTKVISFSDRFLVLTITGALIIGLAMLNEIAPADLGFNHQNLLPAIKDILPVTIISSVLMIVFYLNHGMRIDNTGIPWYFYVFYISLSSPLQEFLYRSYLFNRLAQIQLNQGSIIIITAILYSFAHSIYQDLLTVLLSLIIGLYWAYHYNRFKNFYSITLSHTILGIIAILTGSV
>CP012375.1|AOC54358.1|3564952_3567286_-|Adenylate-cyclase
MSKKIYFKIGSCLQLPNRMAVLPVTLTISDSKGRLEERSSYLSIMPEQLSQTFNIWKNYIIPDSPRRPKIKSLSEQLLSTDGNISLQKLAENLKTEMNQWLTDTQSWINERGEVDSKIQNTLEKYANSQEEIQLFIQTEDRILRGFPWQEWEFLYPLFRLHKNTELSVSATDFARPEQKQTINRLDTRVRILAIFADNELDENNEYKQEKESLDRLKKYGAFIQTLYQPNYSKLIEALEEPAGWHIFFFAGHSHSNPDGRIGWLQISWLDDNQKLQTKEIEINELTKWMQKLINDKLQLAIFNSCDGLGLANQLTSLNLPYCIVMRERVDSFFAGTLLNHLLKAFVEKEKSIFASMRYAREQLLLEYDKGAKPSGKSWLPVIVANPEAFDLTWDSLFIERRFSSKIELILLVILMVIVVGLPLSILGEFGSLNTLQFYAQLYPHIIVYPSLFLPLSLFSLYRAFSLILKKTGIILIITTLIAFTSVIAIFTELNSDPLFLFEIKPDSSIILEIQELNAILISKNINKYQLPPQWLNEINLKEKVNLDKQYIEAFIKGIIQRPEKNNEANGIFLSIAHSHQLWSKHYSISRFFYLFNYWAIFFCAFELTAFLSENIFNDNSVFNIDKYLKYILLCDIGLLLWIPFDNYYTKQVKSLLFQTDNLETNLRIFVYLFIAFLLLMTIVFIIKNPRIKIWNHKASLAFLFISIFVFSISINQFILSKINQSFGIASKSLFVTWTGGFFFLMLVIYPIIIFLIEGKQLEKKLVSFKKLINFLRS

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Crispr_ID: CP012375_19

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP012375_19

3600592-3600774

Unclear

I-D,II-B

Consensus_repeat	Method
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CRISPRCasFinder

2 spacers

cas2,cas1,cas4,cas6

The CRISPR arrays of CP012375_19

>merge|CP012375|19|3600592-3600774|CRISPRCasFinder
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACTGAATATTGGATTGTTGAGGGGTAATTATGGCTGGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACACGTCTCCGGGTCAACCCCGGAAGTGTCACGGTACGCTGTTTCAATCCCTAATAGGGTTTAAGATTAATGGTTCT

>CP012375|19|18|3600592-3600774|CRISPRCasFinder
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TGAATATTGGATTGTTGAGGGGTAATTATGGCTG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ACGTCTCCGGGTCAACCCCGGAAGTGTCACGGTACGCT
GTTTCAATCCCTAATAGGGTTTAAGATTAATGGTTCT

Protein	Signature genes	Signature genes Name	Protein_function
CP012375.1\|AOC54403.1\|3615618_3616452_-\|CRISPR-repeat-RNA-endoribonuclease-Cas6	cas6	COG5551_cas6_CAS-III	gnl\|CDD\|227838
CP012375.1\|AOC54394.1\|3600794_3602021_-\|Transposase	unknown	unknown	gnl\|CDD\|376574
CP012375.1\|AOC54390.1\|3596828_3598994_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226428
CP012375.1\|AOC54397.1\|3607916_3609065_-\|Mobile-element-protein	unknown	unknown	unknown
CP012375.1\|AOC54400.1\|3613727_3614000_-\|CRISPR-associated-protein-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
CP012375.1\|AOC54386.1\|3590933_3591749_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378597
CP012375.1\|AOC54393.1\|3599976_3600471_+\|Mobile-element-protein	unknown	unknown	gnl\|CDD\|315923
CP012375.1\|AOC54401.1\|3614012_3615017_-\|CRISPR-associated-protein-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|274976
CP012375.1\|AOC54402.1\|3615022_3615616_-\|CRISPR-associated-RecB-family-exonuclease-Cas4	cas4	cd09637_cas4_CAS-I:CAS-II:CAS-V	gnl\|CDD\|187768
CP012375.1\|AOC54395.1\|3604511_3604670_+\|hypothetical-protein	unknown	unknown	unknown
CP012375.1\|AOC54388.1\|3594009_3594318_+\|Cytochrome-c,-class-I	unknown	unknown	gnl\|CDD\|379187
CP012375.1\|AOC54385.1\|3590683_3590926_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224246
CP012375.1\|AOC54389.1\|3594657_3596811_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226428
CP012375.1\|AOC54392.1\|3599578_3600022_+\|Mobile-element-protein	unknown	unknown	gnl\|CDD\|225949
CP012375.1\|AOC54396.1\|3607558_3607690_+\|hypothetical-protein	unknown	unknown	unknown
CP012375.1\|AOC54384.1\|3588573_3590538_-\|Lycopene-cyclase,-CruA-type	unknown	unknown	gnl\|CDD\|223717
CP012375.1\|AOC54391.1\|3599006_3599540_+\|hypothetical-protein	unknown	unknown	unknown
CP012375.1\|AOC54398.1\|3610024_3611521_+\|transposase	unknown	unknown	gnl\|CDD\|290319
CP012375.1\|AOC54387.1\|3592745_3593807_-\|Putative-transport-system-permease-protein	unknown	unknown	gnl\|CDD\|366370
CP012375.1\|AOC54399.1\|3612664_3612799_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP012375.1\|AOC54403.1\|3615618_3616452_-\|CRISPR-repeat-RNA-endoribonuclease-Cas6	gnl\|CDD\|227838	COG5551, COG5551, CRISPR system related protein, RAMP superfamily [Defense mechanisms].	2.28864e-45
CP012375.1\|AOC54394.1\|3600794_3602021_-\|Transposase	gnl\|CDD\|376574	pfam01610, DDE_Tnp_ISL3, Transposase. Transposase proteins are necessary for efficient DNA transposition. Contains transposases for IS204, IS1001, IS1096 and IS1165.	4.17478e-80
CP012375.1\|AOC54390.1\|3596828_3598994_+\|hypothetical-protein	gnl\|CDD\|226428	COG3914, Spy, Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones].	3.38343e-162
CP012375.1\|AOC54400.1\|3613727_3614000_-\|CRISPR-associated-protein-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	5.25525e-37
CP012375.1\|AOC54386.1\|3590933_3591749_+\|hypothetical-protein	gnl\|CDD\|378597	pfam11209, DUF2993, Protein of unknown function (DUF2993). This family of proteins with unknown function appears to be restricted to Cyanobacteria.	1.67573e-22
CP012375.1\|AOC54393.1\|3599976_3600471_+\|Mobile-element-protein	gnl\|CDD\|315923	pfam13358, DDE_3, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	2.32222e-41
CP012375.1\|AOC54401.1\|3614012_3615017_-\|CRISPR-associated-protein-Cas1	gnl\|CDD\|274976	TIGR04093, hypothetical_protein_L8106_25395, CRISPR-associated endonuclease Cas1, subtype CYANO. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes a clade of Cas1 limited to the CYANO subtype of CRISPR/Cas system and most often the type found there.	9.27882e-142
CP012375.1\|AOC54402.1\|3615022_3615616_-\|CRISPR-associated-RecB-family-exonuclease-Cas4	gnl\|CDD\|187768	cd09637, Cas4_I-A_I-B_I-C_I-D_II-B, CRISPR/Cas system-associated protein Cas4. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas4 is RecB-like nuclease with three-cysteine C-terminal cluster.	3.46773e-53
CP012375.1\|AOC54392.1\|3599578_3600022_+\|Mobile-element-protein	gnl\|CDD\|225949	COG3415, COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	5.76321e-21
CP012375.1\|AOC54385.1\|3590683_3590926_+\|hypothetical-protein	gnl\|CDD\|224246	COG1327, COG1327, Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains [Transcription].	0.00107048
CP012375.1\|AOC54387.1\|3592745_3593807_-\|Putative-transport-system-permease-protein	gnl\|CDD\|366370	pfam00924, MS_channel, Mechanosensitive ion channel. Two members of this protein family of M. jannaschii have been functionally characterized. Both proteins form mechanosensitive (MS) ion channels upon reconstitution into liposomes and functional examination by the patch-clamp technique. Therefore this family are likely to also be MS channel proteins.	4.78128e-37
CP012375.1\|AOC54388.1\|3594009_3594318_+\|Cytochrome-c,-class-I	gnl\|CDD\|379187	pfam13442, Cytochrome_CBB3, Cytochrome C oxidase, cbb3-type, subunit III.	8.74455e-09
CP012375.1\|AOC54384.1\|3588573_3590538_-\|Lycopene-cyclase,-CruA-type	gnl\|CDD\|223717	COG0644, FixC, Dehydrogenases (flavoproteins) [Energy production and conversion].	3.48037e-13
CP012375.1\|AOC54398.1\|3610024_3611521_+\|transposase	gnl\|CDD\|290319	pfam13586, DDE_Tnp_1_2, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis.	2.0941e-34
CP012375.1\|AOC54389.1\|3594657_3596811_+\|hypothetical-protein	gnl\|CDD\|226428	COG3914, Spy, Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones].	3.2671e-152

>CP012375.1|AOC54393.1|3599976_3600471_+|Mobile-element-protein
MEYWSQVREIEASKLIFIDESGVNLALLRLYARALIGRRDRGRKPQKRGRNISIISAISLEKVVASVNIYGAVDAVTFEGFILKEVLPKIKEGDCLLMDNAKIHLGEMVREIIEQEKARLIYLPPYSPEFSPIENFWSKVKAILRKLKARTYKDLIEGIELAML
>CP012375.1|AOC54392.1|3599578_3600022_+|Mobile-element-protein
MRPYSVDFRQKIIDVWKKEKISIRGLAQRFDVAKSFIQKLLKQHKETGDIRPRPQGGSPPTKLNSEQLIILIEIIESNNDATLEELSDLLYEKTQVKVSRATLGRLTQKLNYSFKKKHYTRRKKKVTGYSKKEWNTGLKFGKLRHQN
>CP012375.1|AOC54391.1|3599006_3599540_+|hypothetical-protein
MQLHQDIQPHLNDNNYQLVLQFYEQLIENNSPVIEDYFYLGLAYLLQDREEDAQATWLLVLSQAAESELSGWIKTLTQILDAEATRQENSQRLETSYLIRLHLQNLNPSFLNNLLHLMELEIQFQIFAMEKCHDWCVFELLENTATAAINLDLLLGVTEKVLIYPSTYSTSWSYEVQ
>CP012375.1|AOC54390.1|3596828_3598994_+|hypothetical-protein
MSWQNEVKTALENNQYDIVSQFYEELIERETTEISHYWYLGLAYLLEDREEDAQATWLLVLSQAAESELSGWIKTLTQILDAEATRQENSQRLETSYLIRLHLQNLNPSFLNNLLHLMELEIQFQIFAMEKCHDWCVFELLENTATAAINLDLLLRVTEKVLIYPCTDTIHFLELAALHINNPEIIATKVISAIVNYAYQQKQSVFAINLVELCLRFLPEDLYLQNSLFNLYKTTTIDYKKSLEIADNFYKSCQTTTEKLLGISLVIAISQAKGDWGNLPKFIDELIQLIERQINAKQFNARPFIIDSILGVTICLPYYQDNPKINRYLQSKLAEIFQADVRTRYNYIAPVSSPKSPARKIKIGYIAYTLRRHSVGWLSRWLFHYHNRDKFEIYTYFVNQAADEITEKWFINNSDYSYNLPAKIEQITAQIRQDNLDILVDLDSLTNNTTCLVIALKPAPIQVTWLGLDASGIPAIDYFIADNYVLPENAEEIYSEKIIRLPNSYLSVDGFEVGVPTRRRTDLNIPDDAIIYLTVQSGLKRTLNMIYLQLQILQQVPNSYLLIKGFADKETIRELFLKSADELGISQDRLRFLPNDFNEETHRANLGIADIVLDTYPYSGATTTLETLWMGIPLVTRVGEQFAARNSYTFMKNAGISQGIAWSDEEYVQWGIKLGLDKNLREEVRWKLRKSRHTSPLWNSKQFTRNLETAYQQMWNIYCQS
>CP012375.1|AOC54389.1|3594657_3596811_+|hypothetical-protein
MSWHSQVEPAIIQGDFWQVSQFYEELIEREPLEISHYWYLGLAYLLEAREEEAQTTWLFVLSQGDEQEMNSWTVDLVNILDGEARRQVEVKNWQLSWVIRQHIYQINPDNLENLLYLVLLEIKLEYFYPQKLKDWQIVDLINSDKLENFDINLLLHTIYKLLDWPAQEVLDIIITLLKIDSQQSAILEIIEQHIEKIYYTDKTNAVILTLSCLDIIPDHLVLLHKIHQYYIDTGNFELALETANKIKNLSNDKAAKLYGIYLLLYTEILAGNWLNIDNKTQEYYQAIQNNLERGQCPMSNQAEVISITSPLAYLKDDLVGNRWLTNQLAKLFQEAVRKRFNQVTIESQKPKDVNKKLNIGYIAHTLRRHSVGFLSRWLIHYHQRDNFNIHLYLVNQVEDDITEQWFKNKVDKYNNLPANPQIIAEKINQDNIDILVDLDSITKDNTCRVMALKPAPIQITWLGLDATGIPAIDYFLVDNLVLEKNAQEFYQEKLWRLPNCYLAVDGFEIGIPTLTRQDLNIPADAITYLTLQVGLKRNPATIRLQMQIIKAVPNSYLLIKGAGSEKLINDLFISIAKEEGIDENRLRFLSGVANEEIHRANLQIADVVLDTYPYSGATTTLETLWMGIPVVTKVGQQWSSRNSYTFMTHGGISEGIAWSDEEYVQWGIKLGKDEQLRRKVIAKLDESRQTSPIWNARQFTKDVENAYRQMWQIYCES
>CP012375.1|AOC54388.1|3594009_3594318_+|Cytochrome-c,-class-I
MFLISTFLITFHLAKMSDPYIKEVLSRQGNVSRGYEIFQINCAACHGQFADGIVGPSLEDVSRRKSRISLIEQVISGKTPPMPKFQPDTQAMADLLVYLENL
>CP012375.1|AOC54387.1|3592745_3593807_-|Putative-transport-system-permease-protein
MNLLTRLEDWPYIILPITIVLSFLLLGWLVEQRVVSQLLSIAREKNLRFSEGVLRSLRGLSILWFGLLGLNIALSLPNLPLFPSLILLSQKFLLVAFLASATWAIAQLSVEILRVYTTGDDGISSLTSLFEFLAKVLIFSCGFLLILSSVGISITPLLTAFGIGGVSLGLALQNTLANLMSGINIITSKKVRPGDYIELRTGEAGYVRDVDLRCTVVEEITNNLLVIPNAQIISSSFRNYSLPDHSLLVPVEVGISYDSDLEKVEKITREVIQEITQLLQPNLGDYQPLIRYGKFDYYSILLTVYLKVVEEEFFQHLTIKHEFIKLLHRRYQQEGIKIPYPIFFPYPPTNPPS
>CP012375.1|AOC54386.1|3590933_3591749_+|hypothetical-protein
MEWLTITLASVLTLLTPAGAIIDRVLADILRSQVQKVEQLAVRVDNTPNYQALQGKIDRVRISARGIYPLADVRIEKIELETEPISLDLRRLQQKNGNLAASLRRPAAGALHLVLTETNVNQALQSAAVKGPIQTLINNLIPSREEFGITKYQFSQANFNFLNNNRVALRLQLETQRLDEPAASLDLSLEVGFKLVQGRKIELIDPTATLNGRRLSSRLLKGFAEGISTQLDLKNFEKQGIIARLLQLQIDDDKLSIAAFGRIEPRSGNPN
>CP012375.1|AOC54385.1|3590683_3590926_+|hypothetical-protein
MNYPIPTTPEEIAALRQRPVDEEMIAAVIAGIIRMARAQGQSLNDLTEEILAEDQVLDQVQRRWLSQLLTNAWQNLAEWV
>CP012375.1|AOC54384.1|3588573_3590538_-|Lycopene-cyclase,-CruA-type
MREILYREIPTPDSSAVCQWLQSDWQPASGVKTNTPNGVRLRLSEALELSIFVWTLQRTTYLKVFRWGERSHYLETSLTRQLDRALQKRFPPQYTTIPNIDQKNQSIFTALEADYPLTVHYFRKMPQGEADLERLYWWEKRWRDSAKNPQQPQPVIFSSSEENDHPIAYDLIYIGGALGAIHAAQMAKLGYRVLLVERLPFGRMNREWNISRSEFQSLINLGLFTAEEFEELIFQEYLDGFNKFFDGNNPPHLKAKILHTPTVLNIAINSDKLLQSCGKKLQDHGGKILDQTEFIKANITANSVTVTLNHSGEIQQIKGRLLIDAMGSASPIAWQLNGVRAFDSVCPTVGAVVEGFEPVVWDSHYGDVLNSHGDISKGRQLIWELFPGEGKELTFYLFHYHQVHPDNPGSLLEMYEDFFTILPEYRQCDPEKLTWKKPTFGYIPGHFSTGKKDRIVSFDRILAIGDAASLQSPLIFTGFGSLVRNLERLTDLLDMALKHNLLTAKDLENVRAYQSNVAVTWLFSKGMMVPTGKTLPPQRINAMLNTFFGLLADEPPEVSETFIKDKTDWLTFSRLAIKAARKNPALLLWIAEMAGSQDLIRWLGSYLDFSLDGVKNLFFGSWFPQWLKNSQSWLEKDNPRLWLKLLSFNYGLRN
>CP012375.1|AOC54394.1|3600794_3602021_-|Transposase
MPSNPQLKLMTELLHLEGVVVTNYQIITDIGIVLHLENMSRESQCIHCGSKTEKVHQNNELTIRDLPFGEQALYLRINRRQMRCEKCGKKFTEELNYLPKKRTYTDRFRKKIVAEVLNSDLKNTAERNGVSEQEIETMLKDLGEELITAKPQGLKKLGIDEIAMIKGKGNYYAVLVNIDTGKIIGLGEKRTEEALTEYLKHWGEEVLSQIEEVSIDLWIGYKNVAEKLMPQAQIVGDRFHVMKQVNNELDEARKEVKREAAKIKNKKNKENILAGIAKSKYALLKNEGDLVEKERKKLEEIYKVSPKLGEMHKLKEEFREVFEKNTEGNEGLFALSDWLKKAMAYFPKSCQTIRRWIDEITAYFDNRTTQGTVEGINNKLKVIKRRGYGFRNFKNFSLRCLLNWHFAS
>CP012375.1|AOC54395.1|3604511_3604670_+|hypothetical-protein
MFQSLIGFKINWNVSSDEEAVVFYEFQSLIGFKINWNSGSKELGLRCKSFNP
>CP012375.1|AOC54396.1|3607558_3607690_+|hypothetical-protein
MELPIKHCLLAVLLFQSLIGFKINWNSQNNVAGAVNLLQRFNP
>CP012375.1|AOC54397.1|3607916_3609065_-|Mobile-element-protein
MISELYQKVLENELGRARYLLLLMIVGTLQILKQAKLEILAEALPIPILFESRRKKLKRFLKLEILNIEKIWFLCLKEMLKQQQRFTTKGLAYIAIDRTSWGAINILMVSLIYDKRAIPIYWEILDKKGSSNLEEQQRVLEKTLTVLSGHKIVVLGDREFCSVSLGKWLQKQSLYFCLRQKKSTNVKTKEGIYQEMRELGLSPGTQLFLNDVNITKEQGFGQFNLAGKWKKTYGGFQTKEPWYILTNFVDLETAIIAYQKRFDIEEMFRDFKSGGYSLEGSQLAPQYLSKLIIVIAIAYTSATLQGKKIKDMGIQKYVTRPEKRYKGQRRHSSFYVGQHLYHWLQLHQMFQKNIEELMQISRYRLKDYIKGQRAISLALSTF
>CP012375.1|AOC54398.1|3610024_3611521_+|transposase
MYRKSELPSTPPENFELPFEGKLSQDNRWVIMANLIPWSEFEAEYASLFSEEMGTPAKTFRTALGALIIKEKLGTSDRETVEQIKENPYLQYFLGFSSYSNEPRFEASMLVHFRERITLELINKVNRFMVKNSREIKEEENTEKKLESETQSQPENRGKLILDASCAPADISYPTDLNLLNQGRKQTEKIIDILYETLKGKLVQKPRTYRLLARKSYLEVAKKRKPTVKQRRKALKRQLQYLKRNLDHIEQLLAEGASLQSLKKRDYKLLLVVTEVYRQQLWMYQNNKQSIEDRIVSLTQPHIRPIVRGKAGKPVEFGAKFSASCIDGYIFLDRISWDNFNESGDLKAQIEAYYDYTGYYPESVHVDKIYRTRENRAWCKERGIRISGPPLGRPAKNVSKEQKKQATDDERIRNCIEGKFGQGKRRFSLGKVMAKLPHTSFSAIAITFLVMNLSNLLRQVFWAFLCLKWKNSTFSRSMIRISYNLKINQQLKLMLVAK
>CP012375.1|AOC54399.1|3612664_3612799_+|hypothetical-protein
MFQSLIGFKINWNALDDLLQSLEGLFQSLIGFKINWNAVKAQPC
>CP012375.1|AOC54400.1|3613727_3614000_-|CRISPR-associated-protein-Cas2
MYFVISYDISDDKRRTKIHNTLKSYGQRVQYSVFECDLTDTQYAKLRGRLSKLIKPDTDSIRFYFLCACCRGKVERIGGELPRDNTIFFV
>CP012375.1|AOC54401.1|3614012_3615017_-|CRISPR-associated-protein-Cas1
MGTVYVTREDAFLGKNDERLTVKASKETILDVPLLNVEGVVLFGRGSLSPALVIELLERHIPLSFVTVTGKYLGRLEPEMTKNIFVRRAQWQAAGDSPKAIHLVRGFVRGKLKNYRNILLRRQRDRKELDLQTAIACLEAAIGSIETTSAIDSLRGLEGAGSAAYFSCFDSLILGDTFTFASRNRRPPRDPVNSLLSLGYALLRHDVQSAINLVGFDPYLGYLHYQRYGRPSLALDLMEEFRAIVVDAVVLNGVNHPYLTPEHFTTEPLSGAVSLTREGLQIFLRLYEQKKQSKFKHPVMSKQCTYQEAFEIQARLMAKYLMDETDKYPPLILK
>CP012375.1|AOC54402.1|3615022_3615616_-|CRISPR-associated-RecB-family-exonuclease-Cas4
MDESDYIPIAALNHYAYCPHRCWRMFVAGEFLNNSYTIEGTNLHERVHTVGAGNREEIWQIRAIWLKSDNYRLIGKADLIESHDGEFIPVEYKRGSKGEWDNDELQVCAQAICLEEMTGKKLDTGYIYYASSHQRQPVAIDLALRQRAIATIRAIETLIQTGKMPLAVYSPRCKGCSLFDRCLPRLTEKVQRYQEED
>CP012375.1|AOC54403.1|3615618_3616452_-|CRISPR-repeat-RNA-endoribonuclease-Cas6
MPYSLVLNLTPRSPIYPNFLTGRHLHALFLTLVSSVDQELGNILHASDADKAFTLSPLQMQSRRKTINFPRWRHEREIAPETPCWWRISLLDDRLFGKLTPLWLNLNPKQPWHLGSADLVITSVLATPQSVQPWANSCTYQYLYENASETNREFDFLFATPVTFRQGKFDSALPTRELVFNSLLSRWNRYSGISFDSIALESIFPSFFDIQTKLTDEAYKNQSIGCVGEIHYRLLGEVEPAKIKAINALADFALYAGVGRKTTMGMGMTRRISKDKR

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Crispr_ID: CP012375_20

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP012375_20

3602218-3607858

Unclear

I-D,II-B

Consensus_repeat	Method
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	PILER-CR
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CRISPRCasFinder
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CRT

78 spacers

cas2,cas1,cas4,cas6,cas3,cas5

The CRISPR arrays of CP012375_20

>merge|CP012375|20|3602218-3607858|PILER-CR,CRISPRCasFinder,CRT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACAAATTCAGGGTATTTTGGCTTAAATCCCCAAAATTGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACTAGGGTGTAAAGAGTCGATACATAGCACATATCCCGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACACGGTTCAACCGACCTAAAACAACTATTAGCAGGGGGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACGTTTTTCGGCTATTTTTAGCCCAATTCTGTAGGAGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACAAGTGGAATTAATGCTTAAAAATACTGCTGAATTGGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACAGGTAACTGACTAGGGACGGTATCAGGCGAATTAGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACTCGGAACACTCAAGGATGCCCTAATCTCGTTGTTTGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACTATTTCTAGAGATTTTAGGGTAATTTCTAGGATCGGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACACCCCGCAGCACTCGGATCGATTTACGATTACCTGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACCTGTATCGTGCCGTCGATTTCATCCCCATAGATGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACCCCGTTGCCAGTCAGGTCTGTCGCGCCTGAAACTGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACAATCAGCAAAGTGTTAAGGCTAGAATGGCGCGATGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACCTTGTTTTATTTGGTATCCACTCGATAATATCGTTGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACTTTCTTTTTCTTTCGATTGGGGCCGGGAGTGTCTAGGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACCCGGGACGGACGGTTATCTACTCAAGCTATCTATGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACTCGATCGCCGCGTCGATCTTTTCCTCGAAGTTGGGCGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACTCGGATCCGAGTCGGTACGACTGCCAGAAAACTTGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACAGTGAGGGTCATCCCTACTACGCGCCCGTTAAGGAGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACTTGGGAAAATACCATTATGTTTGGTGATGAAGTCGATGGGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACGTTTGATACTGCAATTATACCTATTTGTGATTATGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACTTATAGACGTTCCGCGAATACTACTTTAGCCCGTGGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACAAAGTCCATCAACACATATATGTGTTGATTTTCGGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACAAAAGGCCAGGATTTTACCCTATCTGTACTCGATGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACACTTTATACAAGATACTTATACATACTTTATACAAGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACTCGAGGGTCGCTGGTAATATAAAATAAATCCGTGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACATAATTTAGAAGACTCGATCGATATCCAATCGCTGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACATCTAACTGTGACACTTTGAGAATTGGCACTCGATGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACAAGAATGATGATGCTTCTTTTCTGTTTTTAGCCTTGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACCAGGTCTAATAATTCAAGCCCTGTCTCGTTAAGGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACGAAAAAGGGGTGAACCCGAAGGTAACTCGTGGGATTTTGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACTAACCTACTCTTTCCATATTTCTTCTCAAGCTGGTGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACAAGAATTTTTTCGAGATTGGGAGAAATAGGAAGTGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACGTTTCCTCTGATGAGGAAGCGGTGGTTTTTTATGAGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACTCAGGATCAAAAGAATTGGGATTAAGATGTAAAAGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACATCAATCAAGAAACTCAAGAAAGCAATCAAGAAAGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACTAGGTGAGATGCTGAAAAATAAACCCGTCTCTATCTGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACATTGTTCCCGTTGCCGGTCAAGTCTTTTGCCCCGGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACCTGCTAATTTAGCGACTCCTTTAAATGGTATCGTGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACCGGTAGCAATTAGAACTTTACTAGAATCCTCTTTAGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACCAGTACACCGGCGATTATATCATTTACAGAATTGTCGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACAGTACAAATAAAAGATTATGTAACTTTTATTAGTGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACCGTTTTTAACGGTTTTGGGTTTCGTATCCTGATCGAGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACTAAAAAACCATTATTTAGAAGCAAGAAAAAATGCCTGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACCCTTTACCAGACCGGCATAATTCAAGGAATTGGCGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACATTGGGTGCGATACCCGTATCCTTGATAAATCGGTAGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACTACCCTGGAATCATCGGGATTTGAAATCAAAGGCGGGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACGGTTCAACCGACCTAAAACAACTATTAGCAGGGGGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACTGGATAGTTTACATCGCTTTTATCTATCAGAAAGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACATGGTGTTTTTTGTAGTCCATATTTTGATATTTCTGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACGAAAAAGAATTTGAGAGAAATAAGAGAAGATTTGGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACCTATCAGAAAAACTGTTTTATCTGTTGCCACTAAGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACTTGTATAGTGTCAAGAGTTTTATTCTAAGTAGTGGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACATTAATACTATCTTCTCTATTTCTTTTTGAATTTTGTGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACCTGTTTTTTGCTTGCCAGACCTTAATGCAACTGTGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACTTCATGGCACGTCAAACTATTTATTAAGCAATGAGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACTTTATTAGATTTTTTTTGTGCTATCATAGTAGAATGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACCCTCGCTGGTTTCCTTTAGTTTTTTGATGTTTTCCGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACCCCCCCTTCCCCCTCCGGCCCGACCGGCGATCGAGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACAGCATTAAAGGGGGATAAGGTTATCCCCCCAGCGAGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACATGGCGCGGCCGATGATGCTTTTTCCTTCCCCTGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACTAACATAAAATTCCCATCGGTTCCATCTTCTACTGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACTATTCCCGTCGCTATGTGATTAAGAACAGTCCCTTGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACAATCAGGAAACTGTAGAGACTGACTCAATAGATGGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACTCGAAAAAGAATTTGAGAGAAATAAAAGAAGATTTGGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACAAGCATTGACTCGATTTGTTCATACTTAAAATCGGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACGTTTTGATATTGAAAATAAGGATAATAATTGTTATCTGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACGTCTGAAAGTCTTGCTAGAAGCAAGTTTCAAAAAGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACACGCTACCTACTGCATAACCCAGATACCCTAAAGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACTCTCTTTATGAAGGGGAATCGGGCATCTTAATCAAGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACGTTCCGTCCTCTACTGACTGTTTAAAAGTGTCACTGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACTTGGAACGACCGATTACCTCTCTCTCATGAAACCTTACGGAGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACTCCACTGATAACGATAGAATTAATATCATCTAATGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACAGCAATGGCTTTAATATGTGGGCATTCAAGCCGGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACGCGATCGCATGGCTGATCGTCTAAATCGGACTATTGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACTGCCCATCAAACATTGTTTGCTGGCGGTTTTATTGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACTCTCAGAATAATGTGGCGGGTGCGGTCAATCTTCTTCAACGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACTTGATAGTCTGATCCTGGTACAATATCATTAGTCACGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACGTGACTAACGTGATTGCGTTAGGCAATGTCCCTTGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACT

>CP012375|20|3|3602218-3607857|PILER-CR
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AAATTCAGGGTATTTTGGCTTAAATCCCCAAAATT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TAGGGTGTAAAGAGTCGATACATAGCACATATCCC
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ACGGTTCAACCGACCTAAAACAACTATTAGCAGGGG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GTTTTTCGGCTATTTTTAGCCCAATTCTGTAGGA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AAGTGGAATTAATGCTTAAAAATACTGCTGAATTG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AGGTAACTGACTAGGGACGGTATCAGGCGAATTA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TCGGAACACTCAAGGATGCCCTAATCTCGTTGTTT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TATTTCTAGAGATTTTAGGGTAATTTCTAGGATCG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ACCCCGCAGCACTCGGATCGATTTACGATTACCT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CTGTATCGTGCCGTCGATTTCATCCCCATAGAT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CCCGTTGCCAGTCAGGTCTGTCGCGCCTGAAACT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AATCAGCAAAGTGTTAAGGCTAGAATGGCGCGAT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CTTGTTTTATTTGGTATCCACTCGATAATATCGTT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TTTCTTTTTCTTTCGATTGGGGCCGGGAGTGTCTAG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CCGGGACGGACGGTTATCTACTCAAGCTATCTAT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TCGATCGCCGCGTCGATCTTTTCCTCGAAGTTGGGC
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TCGGATCCGAGTCGGTACGACTGCCAGAAAACTT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AGTGAGGGTCATCCCTACTACGCGCCCGTTAAGGA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TTGGGAAAATACCATTATGTTTGGTGATGAAGTCGATGG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GTTTGATACTGCAATTATACCTATTTGTGATTAT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TTATAGACGTTCCGCGAATACTACTTTAGCCCGTG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AAAGTCCATCAACACATATATGTGTTGATTTTCG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AAAAGGCCAGGATTTTACCCTATCTGTACTCGAT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ACTTTATACAAGATACTTATACATACTTTATACAA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TCGAGGGTCGCTGGTAATATAAAATAAATCCGT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ATAATTTAGAAGACTCGATCGATATCCAATCGCT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ATCTAACTGTGACACTTTGAGAATTGGCACTCGAT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AAGAATGATGATGCTTCTTTTCTGTTTTTAGCCTT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CAGGTCTAATAATTCAAGCCCTGTCTCGTTAAG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GAAAAAGGGGTGAACCCGAAGGTAACTCGTGGGATTTT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TAACCTACTCTTTCCATATTTCTTCTCAAGCTGGT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AAGAATTTTTTCGAGATTGGGAGAAATAGGAAGT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GTTTCCTCTGATGAGGAAGCGGTGGTTTTTTATGA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TCAGGATCAAAAGAATTGGGATTAAGATGTAAAA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ATCAATCAAGAAACTCAAGAAAGCAATCAAGAAA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TAGGTGAGATGCTGAAAAATAAACCCGTCTCTATCT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ATTGTTCCCGTTGCCGGTCAAGTCTTTTGCCCCG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CTGCTAATTTAGCGACTCCTTTAAATGGTATCGT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CGGTAGCAATTAGAACTTTACTAGAATCCTCTTTA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CAGTACACCGGCGATTATATCATTTACAGAATTGTC
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AGTACAAATAAAAGATTATGTAACTTTTATTAGT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CGTTTTTAACGGTTTTGGGTTTCGTATCCTGATCGA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TAAAAAACCATTATTTAGAAGCAAGAAAAAATGCCT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CCTTTACCAGACCGGCATAATTCAAGGAATTGGC
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ATTGGGTGCGATACCCGTATCCTTGATAAATCGGTA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TACCCTGGAATCATCGGGATTTGAAATCAAAGGCGG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GGTTCAACCGACCTAAAACAACTATTAGCAGGGG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TGGATAGTTTACATCGCTTTTATCTATCAGAAA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ATGGTGTTTTTTGTAGTCCATATTTTGATATTTCT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GAAAAAGAATTTGAGAGAAATAAGAGAAGATTTG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CTATCAGAAAAACTGTTTTATCTGTTGCCACTAA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TTGTATAGTGTCAAGAGTTTTATTCTAAGTAGTG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ATTAATACTATCTTCTCTATTTCTTTTTGAATTTTGT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CTGTTTTTTGCTTGCCAGACCTTAATGCAACTGT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TTCATGGCACGTCAAACTATTTATTAAGCAATGA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TTTATTAGATTTTTTTTGTGCTATCATAGTAGAAT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CCTCGCTGGTTTCCTTTAGTTTTTTGATGTTTTCC
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CCCCCCTTCCCCCTCCGGCCCGACCGGCGATCGA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AGCATTAAAGGGGGATAAGGTTATCCCCCCAGCGA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ATGGCGCGGCCGATGATGCTTTTTCCTTCCCCT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TAACATAAAATTCCCATCGGTTCCATCTTCTACT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TATTCCCGTCGCTATGTGATTAAGAACAGTCCCTT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AATCAGGAAACTGTAGAGACTGACTCAATAGATG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TCGAAAAAGAATTTGAGAGAAATAAAAGAAGATTTG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AAGCATTGACTCGATTTGTTCATACTTAAAATCG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GTTTTGATATTGAAAATAAGGATAATAATTGTTATCT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GTCTGAAAGTCTTGCTAGAAGCAAGTTTCAAAAA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ACGCTACCTACTGCATAACCCAGATACCCTAAA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TCTCTTTATGAAGGGGAATCGGGCATCTTAATCAA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GTTCCGTCCTCTACTGACTGTTTAAAAGTGTCACT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TTGGAACGACCGATTACCTCTCTCTCATGAAACCTTACGGA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TCCACTGATAACGATAGAATTAATATCATCTAAT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AGCAATGGCTTTAATATGTGGGCATTCAAGCCG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GCGATCGCATGGCTGATCGTCTAAATCGGACTATT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TGCCCATCAAACATTGTTTGCTGGCGGTTTTATT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TCTCAGAATAATGTGGCGGGTGCGGTCAATCTTCTTCAAC
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TTGATAGTCTGATCCTGGTACAATATCATTAGTCAC
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GTGACTAACGTGATTGCGTTAGGCAATGTCCCTT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC

>CP012375|20|19|3602218-3607858|CRISPRCasFinder
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AAATTCAGGGTATTTTGGCTTAAATCCCCAAAATT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TAGGGTGTAAAGAGTCGATACATAGCACATATCCC
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ACGGTTCAACCGACCTAAAACAACTATTAGCAGGGG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GTTTTTCGGCTATTTTTAGCCCAATTCTGTAGGA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AAGTGGAATTAATGCTTAAAAATACTGCTGAATTG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AGGTAACTGACTAGGGACGGTATCAGGCGAATTA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TCGGAACACTCAAGGATGCCCTAATCTCGTTGTTT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TATTTCTAGAGATTTTAGGGTAATTTCTAGGATCG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ACCCCGCAGCACTCGGATCGATTTACGATTACCT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CTGTATCGTGCCGTCGATTTCATCCCCATAGAT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CCCGTTGCCAGTCAGGTCTGTCGCGCCTGAAACT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AATCAGCAAAGTGTTAAGGCTAGAATGGCGCGAT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CTTGTTTTATTTGGTATCCACTCGATAATATCGTT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TTTCTTTTTCTTTCGATTGGGGCCGGGAGTGTCTAG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CCGGGACGGACGGTTATCTACTCAAGCTATCTAT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TCGATCGCCGCGTCGATCTTTTCCTCGAAGTTGGGC
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TCGGATCCGAGTCGGTACGACTGCCAGAAAACTT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AGTGAGGGTCATCCCTACTACGCGCCCGTTAAGGA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TTGGGAAAATACCATTATGTTTGGTGATGAAGTCGATGG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GTTTGATACTGCAATTATACCTATTTGTGATTAT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TTATAGACGTTCCGCGAATACTACTTTAGCCCGTG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AAAGTCCATCAACACATATATGTGTTGATTTTCG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AAAAGGCCAGGATTTTACCCTATCTGTACTCGAT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ACTTTATACAAGATACTTATACATACTTTATACAA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TCGAGGGTCGCTGGTAATATAAAATAAATCCGT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ATAATTTAGAAGACTCGATCGATATCCAATCGCT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ATCTAACTGTGACACTTTGAGAATTGGCACTCGAT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AAGAATGATGATGCTTCTTTTCTGTTTTTAGCCTT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CAGGTCTAATAATTCAAGCCCTGTCTCGTTAAG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GAAAAAGGGGTGAACCCGAAGGTAACTCGTGGGATTTT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TAACCTACTCTTTCCATATTTCTTCTCAAGCTGGT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AAGAATTTTTTCGAGATTGGGAGAAATAGGAAGT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GTTTCCTCTGATGAGGAAGCGGTGGTTTTTTATGA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TCAGGATCAAAAGAATTGGGATTAAGATGTAAAA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ATCAATCAAGAAACTCAAGAAAGCAATCAAGAAA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TAGGTGAGATGCTGAAAAATAAACCCGTCTCTATCT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ATTGTTCCCGTTGCCGGTCAAGTCTTTTGCCCCG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CTGCTAATTTAGCGACTCCTTTAAATGGTATCGT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CGGTAGCAATTAGAACTTTACTAGAATCCTCTTTA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CAGTACACCGGCGATTATATCATTTACAGAATTGTC
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AGTACAAATAAAAGATTATGTAACTTTTATTAGT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CGTTTTTAACGGTTTTGGGTTTCGTATCCTGATCGA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TAAAAAACCATTATTTAGAAGCAAGAAAAAATGCCT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CCTTTACCAGACCGGCATAATTCAAGGAATTGGC
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ATTGGGTGCGATACCCGTATCCTTGATAAATCGGTA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TACCCTGGAATCATCGGGATTTGAAATCAAAGGCGG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GGTTCAACCGACCTAAAACAACTATTAGCAGGGG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TGGATAGTTTACATCGCTTTTATCTATCAGAAA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ATGGTGTTTTTTGTAGTCCATATTTTGATATTTCT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GAAAAAGAATTTGAGAGAAATAAGAGAAGATTTG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CTATCAGAAAAACTGTTTTATCTGTTGCCACTAA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TTGTATAGTGTCAAGAGTTTTATTCTAAGTAGTG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ATTAATACTATCTTCTCTATTTCTTTTTGAATTTTGT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CTGTTTTTTGCTTGCCAGACCTTAATGCAACTGT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TTCATGGCACGTCAAACTATTTATTAAGCAATGA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TTTATTAGATTTTTTTTGTGCTATCATAGTAGAAT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CCTCGCTGGTTTCCTTTAGTTTTTTGATGTTTTCC
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CCCCCCTTCCCCCTCCGGCCCGACCGGCGATCGA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AGCATTAAAGGGGGATAAGGTTATCCCCCCAGCGA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ATGGCGCGGCCGATGATGCTTTTTCCTTCCCCT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TAACATAAAATTCCCATCGGTTCCATCTTCTACT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TATTCCCGTCGCTATGTGATTAAGAACAGTCCCTT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AATCAGGAAACTGTAGAGACTGACTCAATAGATG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TCGAAAAAGAATTTGAGAGAAATAAAAGAAGATTTG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AAGCATTGACTCGATTTGTTCATACTTAAAATCG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GTTTTGATATTGAAAATAAGGATAATAATTGTTATCT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GTCTGAAAGTCTTGCTAGAAGCAAGTTTCAAAAA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ACGCTACCTACTGCATAACCCAGATACCCTAAA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TCTCTTTATGAAGGGGAATCGGGCATCTTAATCAA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GTTCCGTCCTCTACTGACTGTTTAAAAGTGTCACT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TTGGAACGACCGATTACCTCTCTCTCATGAAACCTTACGGA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TCCACTGATAACGATAGAATTAATATCATCTAAT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AGCAATGGCTTTAATATGTGGGCATTCAAGCCG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GCGATCGCATGGCTGATCGTCTAAATCGGACTATT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TGCCCATCAAACATTGTTTGCTGGCGGTTTTATT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TCTCAGAATAATGTGGCGGGTGCGGTCAATCTTCTTCAAC
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TTGATAGTCTGATCCTGGTACAATATCATTAGTCAC
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GTGACTAACGTGATTGCGTTAGGCAATGTCCCTT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACT

>CP012375|20|2|3602218-3607857|CRT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AAATTCAGGGTATTTTGGCTTAAATCCCCAAAATT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TAGGGTGTAAAGAGTCGATACATAGCACATATCCC
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ACGGTTCAACCGACCTAAAACAACTATTAGCAGGGG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GTTTTTCGGCTATTTTTAGCCCAATTCTGTAGGA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AAGTGGAATTAATGCTTAAAAATACTGCTGAATTG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AGGTAACTGACTAGGGACGGTATCAGGCGAATTA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TCGGAACACTCAAGGATGCCCTAATCTCGTTGTTT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TATTTCTAGAGATTTTAGGGTAATTTCTAGGATCG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ACCCCGCAGCACTCGGATCGATTTACGATTACCT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CTGTATCGTGCCGTCGATTTCATCCCCATAGAT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CCCGTTGCCAGTCAGGTCTGTCGCGCCTGAAACT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AATCAGCAAAGTGTTAAGGCTAGAATGGCGCGAT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CTTGTTTTATTTGGTATCCACTCGATAATATCGTT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TTTCTTTTTCTTTCGATTGGGGCCGGGAGTGTCTAG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CCGGGACGGACGGTTATCTACTCAAGCTATCTAT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TCGATCGCCGCGTCGATCTTTTCCTCGAAGTTGGGC
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TCGGATCCGAGTCGGTACGACTGCCAGAAAACTT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AGTGAGGGTCATCCCTACTACGCGCCCGTTAAGGA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TTGGGAAAATACCATTATGTTTGGTGATGAAGTCGATGG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GTTTGATACTGCAATTATACCTATTTGTGATTAT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TTATAGACGTTCCGCGAATACTACTTTAGCCCGTG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AAAGTCCATCAACACATATATGTGTTGATTTTCG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AAAAGGCCAGGATTTTACCCTATCTGTACTCGAT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ACTTTATACAAGATACTTATACATACTTTATACAA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TCGAGGGTCGCTGGTAATATAAAATAAATCCGT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ATAATTTAGAAGACTCGATCGATATCCAATCGCT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ATCTAACTGTGACACTTTGAGAATTGGCACTCGAT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AAGAATGATGATGCTTCTTTTCTGTTTTTAGCCTT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CAGGTCTAATAATTCAAGCCCTGTCTCGTTAAG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GAAAAAGGGGTGAACCCGAAGGTAACTCGTGGGATTTT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TAACCTACTCTTTCCATATTTCTTCTCAAGCTGGT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AAGAATTTTTTCGAGATTGGGAGAAATAGGAAGT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GTTTCCTCTGATGAGGAAGCGGTGGTTTTTTATGA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TCAGGATCAAAAGAATTGGGATTAAGATGTAAAA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ATCAATCAAGAAACTCAAGAAAGCAATCAAGAAA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TAGGTGAGATGCTGAAAAATAAACCCGTCTCTATCT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ATTGTTCCCGTTGCCGGTCAAGTCTTTTGCCCCG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CTGCTAATTTAGCGACTCCTTTAAATGGTATCGT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CGGTAGCAATTAGAACTTTACTAGAATCCTCTTTA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CAGTACACCGGCGATTATATCATTTACAGAATTGTC
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AGTACAAATAAAAGATTATGTAACTTTTATTAGT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CGTTTTTAACGGTTTTGGGTTTCGTATCCTGATCGA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TAAAAAACCATTATTTAGAAGCAAGAAAAAATGCCT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CCTTTACCAGACCGGCATAATTCAAGGAATTGGC
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ATTGGGTGCGATACCCGTATCCTTGATAAATCGGTA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TACCCTGGAATCATCGGGATTTGAAATCAAAGGCGG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GGTTCAACCGACCTAAAACAACTATTAGCAGGGG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TGGATAGTTTACATCGCTTTTATCTATCAGAAA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ATGGTGTTTTTTGTAGTCCATATTTTGATATTTCT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GAAAAAGAATTTGAGAGAAATAAGAGAAGATTTG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CTATCAGAAAAACTGTTTTATCTGTTGCCACTAA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TTGTATAGTGTCAAGAGTTTTATTCTAAGTAGTG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ATTAATACTATCTTCTCTATTTCTTTTTGAATTTTGT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CTGTTTTTTGCTTGCCAGACCTTAATGCAACTGT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TTCATGGCACGTCAAACTATTTATTAAGCAATGA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TTTATTAGATTTTTTTTGTGCTATCATAGTAGAAT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CCTCGCTGGTTTCCTTTAGTTTTTTGATGTTTTCC
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CCCCCCTTCCCCCTCCGGCCCGACCGGCGATCGA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AGCATTAAAGGGGGATAAGGTTATCCCCCCAGCGA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ATGGCGCGGCCGATGATGCTTTTTCCTTCCCCT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TAACATAAAATTCCCATCGGTTCCATCTTCTACT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TATTCCCGTCGCTATGTGATTAAGAACAGTCCCTT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AATCAGGAAACTGTAGAGACTGACTCAATAGATG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TCGAAAAAGAATTTGAGAGAAATAAAAGAAGATTTG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AAGCATTGACTCGATTTGTTCATACTTAAAATCG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GTTTTGATATTGAAAATAAGGATAATAATTGTTATCT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GTCTGAAAGTCTTGCTAGAAGCAAGTTTCAAAAA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ACGCTACCTACTGCATAACCCAGATACCCTAAA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TCTCTTTATGAAGGGGAATCGGGCATCTTAATCAA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GTTCCGTCCTCTACTGACTGTTTAAAAGTGTCACT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TTGGAACGACCGATTACCTCTCTCTCATGAAACCTTACGGA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TCCACTGATAACGATAGAATTAATATCATCTAAT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AGCAATGGCTTTAATATGTGGGCATTCAAGCCG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GCGATCGCATGGCTGATCGTCTAAATCGGACTATT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TGCCCATCAAACATTGTTTGCTGGCGGTTTTATT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TCTCAGAATAATGTGGCGGGTGCGGTCAATCTTCTTCAAC
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TTGATAGTCTGATCCTGGTACAATATCATTAGTCAC
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GTGACTAACGTGATTGCGTTAGGCAATGTCCCTT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC

Protein	Signature genes	Signature genes Name	Protein_function
CP012375.1\|AOC54403.1\|3615618_3616452_-\|CRISPR-repeat-RNA-endoribonuclease-Cas6	cas6	COG5551_cas6_CAS-III	gnl\|CDD\|227838
CP012375.1\|AOC54394.1\|3600794_3602021_-\|Transposase	unknown	unknown	gnl\|CDD\|376574
CP012375.1\|AOC54390.1\|3596828_3598994_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226428
CP012375.1\|AOC54404.1\|3616451_3617018_-\|Protein-of-unknown-function-DUF820	unknown	unknown	gnl\|CDD\|99749
CP012375.1\|AOC54400.1\|3613727_3614000_-\|CRISPR-associated-protein-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
CP012375.1\|AOC54386.1\|3590933_3591749_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378597
CP012375.1\|AOC54393.1\|3599976_3600471_+\|Mobile-element-protein	unknown	unknown	gnl\|CDD\|315923
CP012375.1\|AOC54401.1\|3614012_3615017_-\|CRISPR-associated-protein-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|274976
CP012375.1\|AOC54405.1\|3617058_3619794_-\|CRISPR-associated-helicase-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
CP012375.1\|AOC54402.1\|3615022_3615616_-\|CRISPR-associated-RecB-family-exonuclease-Cas4	cas4	cd09637_cas4_CAS-I:CAS-II:CAS-V	gnl\|CDD\|187768
CP012375.1\|AOC54388.1\|3594009_3594318_+\|Cytochrome-c,-class-I	unknown	unknown	gnl\|CDD\|379187
CP012375.1\|AOC54385.1\|3590683_3590926_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224246
CP012375.1\|AOC54389.1\|3594657_3596811_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226428
CP012375.1\|AOC54392.1\|3599578_3600022_+\|Mobile-element-protein	unknown	unknown	gnl\|CDD\|225949
CP012375.1\|AOC54397.1\|3607916_3609065_-\|Mobile-element-protein	unknown	unknown	unknown
CP012375.1\|AOC54406.1\|3619786_3620476_-\|hypothetical-protein	cas5	cls000047_cas5_CAS-I-B	unknown
CP012375.1\|AOC54391.1\|3599006_3599540_+\|hypothetical-protein	unknown	unknown	unknown
CP012375.1\|AOC54398.1\|3610024_3611521_+\|transposase	unknown	unknown	gnl\|CDD\|290319
CP012375.1\|AOC54387.1\|3592745_3593807_-\|Putative-transport-system-permease-protein	unknown	unknown	gnl\|CDD\|366370
CP012375.1\|AOC54399.1\|3612664_3612799_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP012375.1\|AOC54403.1\|3615618_3616452_-\|CRISPR-repeat-RNA-endoribonuclease-Cas6	gnl\|CDD\|227838	COG5551, COG5551, CRISPR system related protein, RAMP superfamily [Defense mechanisms].	2.28864e-45
CP012375.1\|AOC54394.1\|3600794_3602021_-\|Transposase	gnl\|CDD\|376574	pfam01610, DDE_Tnp_ISL3, Transposase. Transposase proteins are necessary for efficient DNA transposition. Contains transposases for IS204, IS1001, IS1096 and IS1165.	4.17478e-80
CP012375.1\|AOC54390.1\|3596828_3598994_+\|hypothetical-protein	gnl\|CDD\|226428	COG3914, Spy, Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones].	3.38343e-162
CP012375.1\|AOC54405.1\|3617058_3619794_-\|CRISPR-associated-helicase-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	3.32697e-43
CP012375.1\|AOC54400.1\|3613727_3614000_-\|CRISPR-associated-protein-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	5.25525e-37
CP012375.1\|AOC54393.1\|3599976_3600471_+\|Mobile-element-protein	gnl\|CDD\|315923	pfam13358, DDE_3, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	2.32222e-41
CP012375.1\|AOC54401.1\|3614012_3615017_-\|CRISPR-associated-protein-Cas1	gnl\|CDD\|274976	TIGR04093, hypothetical_protein_L8106_25395, CRISPR-associated endonuclease Cas1, subtype CYANO. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes a clade of Cas1 limited to the CYANO subtype of CRISPR/Cas system and most often the type found there.	9.27882e-142
CP012375.1\|AOC54386.1\|3590933_3591749_+\|hypothetical-protein	gnl\|CDD\|378597	pfam11209, DUF2993, Protein of unknown function (DUF2993). This family of proteins with unknown function appears to be restricted to Cyanobacteria.	1.67573e-22
CP012375.1\|AOC54402.1\|3615022_3615616_-\|CRISPR-associated-RecB-family-exonuclease-Cas4	gnl\|CDD\|187768	cd09637, Cas4_I-A_I-B_I-C_I-D_II-B, CRISPR/Cas system-associated protein Cas4. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas4 is RecB-like nuclease with three-cysteine C-terminal cluster.	3.46773e-53
CP012375.1\|AOC54388.1\|3594009_3594318_+\|Cytochrome-c,-class-I	gnl\|CDD\|379187	pfam13442, Cytochrome_CBB3, Cytochrome C oxidase, cbb3-type, subunit III.	8.74455e-09
CP012375.1\|AOC54385.1\|3590683_3590926_+\|hypothetical-protein	gnl\|CDD\|224246	COG1327, COG1327, Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains [Transcription].	0.00107048
CP012375.1\|AOC54389.1\|3594657_3596811_+\|hypothetical-protein	gnl\|CDD\|226428	COG3914, Spy, Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones].	3.2671e-152
CP012375.1\|AOC54392.1\|3599578_3600022_+\|Mobile-element-protein	gnl\|CDD\|225949	COG3415, COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	5.76321e-21
CP012375.1\|AOC54404.1\|3616451_3617018_-\|Protein-of-unknown-function-DUF820	gnl\|CDD\|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	1.55985e-27
CP012375.1\|AOC54398.1\|3610024_3611521_+\|transposase	gnl\|CDD\|290319	pfam13586, DDE_Tnp_1_2, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis.	2.0941e-34
CP012375.1\|AOC54387.1\|3592745_3593807_-\|Putative-transport-system-permease-protein	gnl\|CDD\|366370	pfam00924, MS_channel, Mechanosensitive ion channel. Two members of this protein family of M. jannaschii have been functionally characterized. Both proteins form mechanosensitive (MS) ion channels upon reconstitution into liposomes and functional examination by the patch-clamp technique. Therefore this family are likely to also be MS channel proteins.	4.78128e-37

>CP012375.1|AOC54394.1|3600794_3602021_-|Transposase
MPSNPQLKLMTELLHLEGVVVTNYQIITDIGIVLHLENMSRESQCIHCGSKTEKVHQNNELTIRDLPFGEQALYLRINRRQMRCEKCGKKFTEELNYLPKKRTYTDRFRKKIVAEVLNSDLKNTAERNGVSEQEIETMLKDLGEELITAKPQGLKKLGIDEIAMIKGKGNYYAVLVNIDTGKIIGLGEKRTEEALTEYLKHWGEEVLSQIEEVSIDLWIGYKNVAEKLMPQAQIVGDRFHVMKQVNNELDEARKEVKREAAKIKNKKNKENILAGIAKSKYALLKNEGDLVEKERKKLEEIYKVSPKLGEMHKLKEEFREVFEKNTEGNEGLFALSDWLKKAMAYFPKSCQTIRRWIDEITAYFDNRTTQGTVEGINNKLKVIKRRGYGFRNFKNFSLRCLLNWHFAS
>CP012375.1|AOC54393.1|3599976_3600471_+|Mobile-element-protein
MEYWSQVREIEASKLIFIDESGVNLALLRLYARALIGRRDRGRKPQKRGRNISIISAISLEKVVASVNIYGAVDAVTFEGFILKEVLPKIKEGDCLLMDNAKIHLGEMVREIIEQEKARLIYLPPYSPEFSPIENFWSKVKAILRKLKARTYKDLIEGIELAML
>CP012375.1|AOC54392.1|3599578_3600022_+|Mobile-element-protein
MRPYSVDFRQKIIDVWKKEKISIRGLAQRFDVAKSFIQKLLKQHKETGDIRPRPQGGSPPTKLNSEQLIILIEIIESNNDATLEELSDLLYEKTQVKVSRATLGRLTQKLNYSFKKKHYTRRKKKVTGYSKKEWNTGLKFGKLRHQN
>CP012375.1|AOC54391.1|3599006_3599540_+|hypothetical-protein
MQLHQDIQPHLNDNNYQLVLQFYEQLIENNSPVIEDYFYLGLAYLLQDREEDAQATWLLVLSQAAESELSGWIKTLTQILDAEATRQENSQRLETSYLIRLHLQNLNPSFLNNLLHLMELEIQFQIFAMEKCHDWCVFELLENTATAAINLDLLLGVTEKVLIYPSTYSTSWSYEVQ
>CP012375.1|AOC54390.1|3596828_3598994_+|hypothetical-protein
MSWQNEVKTALENNQYDIVSQFYEELIERETTEISHYWYLGLAYLLEDREEDAQATWLLVLSQAAESELSGWIKTLTQILDAEATRQENSQRLETSYLIRLHLQNLNPSFLNNLLHLMELEIQFQIFAMEKCHDWCVFELLENTATAAINLDLLLRVTEKVLIYPCTDTIHFLELAALHINNPEIIATKVISAIVNYAYQQKQSVFAINLVELCLRFLPEDLYLQNSLFNLYKTTTIDYKKSLEIADNFYKSCQTTTEKLLGISLVIAISQAKGDWGNLPKFIDELIQLIERQINAKQFNARPFIIDSILGVTICLPYYQDNPKINRYLQSKLAEIFQADVRTRYNYIAPVSSPKSPARKIKIGYIAYTLRRHSVGWLSRWLFHYHNRDKFEIYTYFVNQAADEITEKWFINNSDYSYNLPAKIEQITAQIRQDNLDILVDLDSLTNNTTCLVIALKPAPIQVTWLGLDASGIPAIDYFIADNYVLPENAEEIYSEKIIRLPNSYLSVDGFEVGVPTRRRTDLNIPDDAIIYLTVQSGLKRTLNMIYLQLQILQQVPNSYLLIKGFADKETIRELFLKSADELGISQDRLRFLPNDFNEETHRANLGIADIVLDTYPYSGATTTLETLWMGIPLVTRVGEQFAARNSYTFMKNAGISQGIAWSDEEYVQWGIKLGLDKNLREEVRWKLRKSRHTSPLWNSKQFTRNLETAYQQMWNIYCQS
>CP012375.1|AOC54389.1|3594657_3596811_+|hypothetical-protein
MSWHSQVEPAIIQGDFWQVSQFYEELIEREPLEISHYWYLGLAYLLEAREEEAQTTWLFVLSQGDEQEMNSWTVDLVNILDGEARRQVEVKNWQLSWVIRQHIYQINPDNLENLLYLVLLEIKLEYFYPQKLKDWQIVDLINSDKLENFDINLLLHTIYKLLDWPAQEVLDIIITLLKIDSQQSAILEIIEQHIEKIYYTDKTNAVILTLSCLDIIPDHLVLLHKIHQYYIDTGNFELALETANKIKNLSNDKAAKLYGIYLLLYTEILAGNWLNIDNKTQEYYQAIQNNLERGQCPMSNQAEVISITSPLAYLKDDLVGNRWLTNQLAKLFQEAVRKRFNQVTIESQKPKDVNKKLNIGYIAHTLRRHSVGFLSRWLIHYHQRDNFNIHLYLVNQVEDDITEQWFKNKVDKYNNLPANPQIIAEKINQDNIDILVDLDSITKDNTCRVMALKPAPIQITWLGLDATGIPAIDYFLVDNLVLEKNAQEFYQEKLWRLPNCYLAVDGFEIGIPTLTRQDLNIPADAITYLTLQVGLKRNPATIRLQMQIIKAVPNSYLLIKGAGSEKLINDLFISIAKEEGIDENRLRFLSGVANEEIHRANLQIADVVLDTYPYSGATTTLETLWMGIPVVTKVGQQWSSRNSYTFMTHGGISEGIAWSDEEYVQWGIKLGKDEQLRRKVIAKLDESRQTSPIWNARQFTKDVENAYRQMWQIYCES
>CP012375.1|AOC54388.1|3594009_3594318_+|Cytochrome-c,-class-I
MFLISTFLITFHLAKMSDPYIKEVLSRQGNVSRGYEIFQINCAACHGQFADGIVGPSLEDVSRRKSRISLIEQVISGKTPPMPKFQPDTQAMADLLVYLENL
>CP012375.1|AOC54387.1|3592745_3593807_-|Putative-transport-system-permease-protein
MNLLTRLEDWPYIILPITIVLSFLLLGWLVEQRVVSQLLSIAREKNLRFSEGVLRSLRGLSILWFGLLGLNIALSLPNLPLFPSLILLSQKFLLVAFLASATWAIAQLSVEILRVYTTGDDGISSLTSLFEFLAKVLIFSCGFLLILSSVGISITPLLTAFGIGGVSLGLALQNTLANLMSGINIITSKKVRPGDYIELRTGEAGYVRDVDLRCTVVEEITNNLLVIPNAQIISSSFRNYSLPDHSLLVPVEVGISYDSDLEKVEKITREVIQEITQLLQPNLGDYQPLIRYGKFDYYSILLTVYLKVVEEEFFQHLTIKHEFIKLLHRRYQQEGIKIPYPIFFPYPPTNPPS
>CP012375.1|AOC54386.1|3590933_3591749_+|hypothetical-protein
MEWLTITLASVLTLLTPAGAIIDRVLADILRSQVQKVEQLAVRVDNTPNYQALQGKIDRVRISARGIYPLADVRIEKIELETEPISLDLRRLQQKNGNLAASLRRPAAGALHLVLTETNVNQALQSAAVKGPIQTLINNLIPSREEFGITKYQFSQANFNFLNNNRVALRLQLETQRLDEPAASLDLSLEVGFKLVQGRKIELIDPTATLNGRRLSSRLLKGFAEGISTQLDLKNFEKQGIIARLLQLQIDDDKLSIAAFGRIEPRSGNPN
>CP012375.1|AOC54385.1|3590683_3590926_+|hypothetical-protein
MNYPIPTTPEEIAALRQRPVDEEMIAAVIAGIIRMARAQGQSLNDLTEEILAEDQVLDQVQRRWLSQLLTNAWQNLAEWV
>CP012375.1|AOC54397.1|3607916_3609065_-|Mobile-element-protein
MISELYQKVLENELGRARYLLLLMIVGTLQILKQAKLEILAEALPIPILFESRRKKLKRFLKLEILNIEKIWFLCLKEMLKQQQRFTTKGLAYIAIDRTSWGAINILMVSLIYDKRAIPIYWEILDKKGSSNLEEQQRVLEKTLTVLSGHKIVVLGDREFCSVSLGKWLQKQSLYFCLRQKKSTNVKTKEGIYQEMRELGLSPGTQLFLNDVNITKEQGFGQFNLAGKWKKTYGGFQTKEPWYILTNFVDLETAIIAYQKRFDIEEMFRDFKSGGYSLEGSQLAPQYLSKLIIVIAIAYTSATLQGKKIKDMGIQKYVTRPEKRYKGQRRHSSFYVGQHLYHWLQLHQMFQKNIEELMQISRYRLKDYIKGQRAISLALSTF
>CP012375.1|AOC54398.1|3610024_3611521_+|transposase
MYRKSELPSTPPENFELPFEGKLSQDNRWVIMANLIPWSEFEAEYASLFSEEMGTPAKTFRTALGALIIKEKLGTSDRETVEQIKENPYLQYFLGFSSYSNEPRFEASMLVHFRERITLELINKVNRFMVKNSREIKEEENTEKKLESETQSQPENRGKLILDASCAPADISYPTDLNLLNQGRKQTEKIIDILYETLKGKLVQKPRTYRLLARKSYLEVAKKRKPTVKQRRKALKRQLQYLKRNLDHIEQLLAEGASLQSLKKRDYKLLLVVTEVYRQQLWMYQNNKQSIEDRIVSLTQPHIRPIVRGKAGKPVEFGAKFSASCIDGYIFLDRISWDNFNESGDLKAQIEAYYDYTGYYPESVHVDKIYRTRENRAWCKERGIRISGPPLGRPAKNVSKEQKKQATDDERIRNCIEGKFGQGKRRFSLGKVMAKLPHTSFSAIAITFLVMNLSNLLRQVFWAFLCLKWKNSTFSRSMIRISYNLKINQQLKLMLVAK
>CP012375.1|AOC54399.1|3612664_3612799_+|hypothetical-protein
MFQSLIGFKINWNALDDLLQSLEGLFQSLIGFKINWNAVKAQPC
>CP012375.1|AOC54400.1|3613727_3614000_-|CRISPR-associated-protein-Cas2
MYFVISYDISDDKRRTKIHNTLKSYGQRVQYSVFECDLTDTQYAKLRGRLSKLIKPDTDSIRFYFLCACCRGKVERIGGELPRDNTIFFV
>CP012375.1|AOC54401.1|3614012_3615017_-|CRISPR-associated-protein-Cas1
MGTVYVTREDAFLGKNDERLTVKASKETILDVPLLNVEGVVLFGRGSLSPALVIELLERHIPLSFVTVTGKYLGRLEPEMTKNIFVRRAQWQAAGDSPKAIHLVRGFVRGKLKNYRNILLRRQRDRKELDLQTAIACLEAAIGSIETTSAIDSLRGLEGAGSAAYFSCFDSLILGDTFTFASRNRRPPRDPVNSLLSLGYALLRHDVQSAINLVGFDPYLGYLHYQRYGRPSLALDLMEEFRAIVVDAVVLNGVNHPYLTPEHFTTEPLSGAVSLTREGLQIFLRLYEQKKQSKFKHPVMSKQCTYQEAFEIQARLMAKYLMDETDKYPPLILK
>CP012375.1|AOC54402.1|3615022_3615616_-|CRISPR-associated-RecB-family-exonuclease-Cas4
MDESDYIPIAALNHYAYCPHRCWRMFVAGEFLNNSYTIEGTNLHERVHTVGAGNREEIWQIRAIWLKSDNYRLIGKADLIESHDGEFIPVEYKRGSKGEWDNDELQVCAQAICLEEMTGKKLDTGYIYYASSHQRQPVAIDLALRQRAIATIRAIETLIQTGKMPLAVYSPRCKGCSLFDRCLPRLTEKVQRYQEED
>CP012375.1|AOC54403.1|3615618_3616452_-|CRISPR-repeat-RNA-endoribonuclease-Cas6
MPYSLVLNLTPRSPIYPNFLTGRHLHALFLTLVSSVDQELGNILHASDADKAFTLSPLQMQSRRKTINFPRWRHEREIAPETPCWWRISLLDDRLFGKLTPLWLNLNPKQPWHLGSADLVITSVLATPQSVQPWANSCTYQYLYENASETNREFDFLFATPVTFRQGKFDSALPTRELVFNSLLSRWNRYSGISFDSIALESIFPSFFDIQTKLTDEAYKNQSIGCVGEIHYRLLGEVEPAKIKAINALADFALYAGVGRKTTMGMGMTRRISKDKR
>CP012375.1|AOC54404.1|3616451_3617018_-|Protein-of-unknown-function-DUF820
MTLISSKSLTLPEFLSLTPPDGDITYELVDGEAIPKMSPKFFHSRLTGALFLLLDRWNQGRGEVGIEWAIVLSKNDRDWCPVPDLLYISPERLGDITLTDEACPVPPELVIEIISPEQSFSSLSEKAVDYLKAGVSRVWIVDPQAKQITIFYPDAPPAIKKGDDEMSDILLPDLTLTPGQIFAKARLS
>CP012375.1|AOC54405.1|3617058_3619794_-|CRISPR-associated-helicase-Cas3
MSKSNPQPFFKFGRVFFPGEPTIAPDKILFQPLGNHVGNVRQLARKWQDGNFSLERVIEGINLHDKAKPQTFKIRVETNKQGEFTKYTYSFKGHRFKVDNPQNLWVQALARGHHDYSTKEIIKDTYQLKKDTEYQKIFSKDPLQYAKELYILEMCDQIEAELACRVIGDDEQAKSRTFMDFTITKGTSEDSNHRVFYLDPYPFKEPTITLNFRSWTYNLSDEDKNQLQQLHENRKDKELGSKLNTLVKEWWKKNEHTISEDRAITAIIKPDNSNTYSPSEKSENAIFWWYEELANFQPNPMQEEVFQTMVKNQHPAFILKAPTGAGKFEAIIIPFLAMLSTKEDRPRLIIPLPARSLLEDQKQRCDKYLKQFSLLHKGREVSLVIDTGTEMNRYVYLDGEVKSSNNSRRHLYKGDIILTTIDKFIYRYFGYGDKQKSFIFPYRIYHGNTLICFDEAHTYDDISFTNFCSLVKALYEAGCSLVLMTATLSQNHLERFDYLADNMIDYIDVQDNLEKLNNFYQQILKQDYSNLKQFEFYEEPTNLQQKLTSIALEEWNSNPSHRIIVSVETVKDAIAIYEKIKQTLNIKFSEKKEFLFLYHGRLSDIPKTSHYSRTNLYQRLKERDENDQAYILVTTSAIEVGCDLNSTRLITQLCNPESLIQRAGRCNRKGNVEDAKIIVIGNNIPEFVNTLSEAELENYKTILKGLHDQNFDPKAIMNCVSTKQTIDDYRVVELFSLLQDYVYNADLTCQSAHEKGLVITRSWTPSVTLVYDDGKQGDSLEKIVKESPQIQVSIDRLILKKNNEGNYTNQYANVSVYEWIYDKEETRYKLEPLKYWGCAYSKELVIKVCAVQEGAISDSFEPYSYDHELGFKDLPGVFIKWRSNGYQERLQYNPTKDRSVVINYTSALTQD
>CP012375.1|AOC54406.1|3619786_3620476_-|hypothetical-protein
MLSEGLDIPETSINKENPPYFTLPRQYIALGAYPVLDKWSGVHRTHRKGTRSFNHDVFSRLYIDGDRENFQLHTWEYFIAEELIGYVVSESKSSLEAFSNLQGVGCKIGKEGFAVIDEVSESIRLQRKILSAHPSTVVPMEALIQRNPCINRCDIYNLYRHEWSADQTQDEDKGLFDTERSPINGFIPFVAAYYPEKAHPLPTLDFYTDGNLQIPVALVELLQRESINV

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Crispr_ID: CP012375_21

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP012375_21

3609178-3609866

Unclear

I-D,II-B

Consensus_repeat	Method
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	PILER-CR
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CRISPRCasFinder
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CRT

9 spacers

cas2,cas1,cas4,cas6,cas3,cas5,cas7

The CRISPR arrays of CP012375_21

>merge|CP012375|21|3609178-3609866|PILER-CR,CRISPRCasFinder,CRT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACCCTTGCCCACTGACGCACAAAAGCAATTAAACAAGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACTTTCGCTTGATTGGTACTCCAGACAAGGAAAATGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACTTTGGTGTTGCAAGAGTGTCCAGATTTGGTACGCCGGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACGTGGTATGTGAGCATTACCCATGATCAGGATTCGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACAGAACAAAATATTGTCTATTCTATTACGAGAATAGGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACAAGTGCGATTGTGGTGGTCGGTGTTGCTGCAGTGTGGAGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACTAATGTCAATATCTCTGGAAGTTGGCAAAATAAGGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACCTTTTTCGCCATTGTCACGTCTTACACAGTCGATGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACGTTATCAGTAATTAACCCATTTAGGAGTACCAAAAAATGACTGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC

>CP012375|21|4|3609178-3609866|PILER-CR
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CCTTGCCCACTGACGCACAAAAGCAATTAAACAA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TTTCGCTTGATTGGTACTCCAGACAAGGAAAAT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TTTGGTGTTGCAAGAGTGTCCAGATTTGGTACGCCG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GTGGTATGTGAGCATTACCCATGATCAGGATTC
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AGAACAAAATATTGTCTATTCTATTACGAGAATAG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AAGTGCGATTGTGGTGGTCGGTGTTGCTGCAGTGTGGA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TAATGTCAATATCTCTGGAAGTTGGCAAAATAAG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CTTTTTCGCCATTGTCACGTCTTACACAGTCGAT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GTTATCAGTAATTAACCCATTTAGGAGTACCAAAAAATGACT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC

>CP012375|21|20|3609178-3609866|CRISPRCasFinder
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CCTTGCCCACTGACGCACAAAAGCAATTAAACAA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TTTCGCTTGATTGGTACTCCAGACAAGGAAAAT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TTTGGTGTTGCAAGAGTGTCCAGATTTGGTACGCCG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GTGGTATGTGAGCATTACCCATGATCAGGATTC
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AGAACAAAATATTGTCTATTCTATTACGAGAATAG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AAGTGCGATTGTGGTGGTCGGTGTTGCTGCAGTGTGGA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TAATGTCAATATCTCTGGAAGTTGGCAAAATAAG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CTTTTTCGCCATTGTCACGTCTTACACAGTCGAT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GTTATCAGTAATTAACCCATTTAGGAGTACCAAAAAATGACT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC

>CP012375|21|3|3609178-3609866|CRT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CCTTGCCCACTGACGCACAAAAGCAATTAAACAA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TTTCGCTTGATTGGTACTCCAGACAAGGAAAAT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TTTGGTGTTGCAAGAGTGTCCAGATTTGGTACGCCG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GTGGTATGTGAGCATTACCCATGATCAGGATTC
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AGAACAAAATATTGTCTATTCTATTACGAGAATAG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AAGTGCGATTGTGGTGGTCGGTGTTGCTGCAGTGTGGA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TAATGTCAATATCTCTGGAAGTTGGCAAAATAAG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CTTTTTCGCCATTGTCACGTCTTACACAGTCGAT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GTTATCAGTAATTAACCCATTTAGGAGTACCAAAAAATGACT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC

Protein	Signature genes	Signature genes Name	Protein_function
CP012375.1\|AOC54403.1\|3615618_3616452_-\|CRISPR-repeat-RNA-endoribonuclease-Cas6	cas6	COG5551_cas6_CAS-III	gnl\|CDD\|227838
CP012375.1\|AOC54394.1\|3600794_3602021_-\|Transposase	unknown	unknown	gnl\|CDD\|376574
CP012375.1\|AOC54390.1\|3596828_3598994_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226428
CP012375.1\|AOC54404.1\|3616451_3617018_-\|Protein-of-unknown-function-DUF820	unknown	unknown	gnl\|CDD\|99749
CP012375.1\|AOC54400.1\|3613727_3614000_-\|CRISPR-associated-protein-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
CP012375.1\|AOC54393.1\|3599976_3600471_+\|Mobile-element-protein	unknown	unknown	gnl\|CDD\|315923
CP012375.1\|AOC54401.1\|3614012_3615017_-\|CRISPR-associated-protein-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|274976
CP012375.1\|AOC54402.1\|3615022_3615616_-\|CRISPR-associated-RecB-family-exonuclease-Cas4	cas4	cd09637_cas4_CAS-I:CAS-II:CAS-V	gnl\|CDD\|187768
CP012375.1\|AOC54405.1\|3617058_3619794_-\|CRISPR-associated-helicase-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
CP012375.1\|AOC54395.1\|3604511_3604670_+\|hypothetical-protein	unknown	unknown	unknown
CP012375.1\|AOC54388.1\|3594009_3594318_+\|Cytochrome-c,-class-I	unknown	unknown	gnl\|CDD\|379187
CP012375.1\|AOC54389.1\|3594657_3596811_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226428
CP012375.1\|AOC54392.1\|3599578_3600022_+\|Mobile-element-protein	unknown	unknown	gnl\|CDD\|225949
CP012375.1\|AOC54396.1\|3607558_3607690_+\|hypothetical-protein	unknown	unknown	unknown
CP012375.1\|AOC54407.1\|3620614_3621508_-\|hypothetical-protein	cas7	cls000038_cas7_CAS-I-B	unknown
CP012375.1\|AOC54397.1\|3607916_3609065_-\|Mobile-element-protein	unknown	unknown	unknown
CP012375.1\|AOC54406.1\|3619786_3620476_-\|hypothetical-protein	cas5	cls000047_cas5_CAS-I-B	unknown
CP012375.1\|AOC54391.1\|3599006_3599540_+\|hypothetical-protein	unknown	unknown	unknown
CP012375.1\|AOC54398.1\|3610024_3611521_+\|transposase	unknown	unknown	gnl\|CDD\|290319
CP012375.1\|AOC54399.1\|3612664_3612799_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP012375.1\|AOC54403.1\|3615618_3616452_-\|CRISPR-repeat-RNA-endoribonuclease-Cas6	gnl\|CDD\|227838	COG5551, COG5551, CRISPR system related protein, RAMP superfamily [Defense mechanisms].	2.28864e-45
CP012375.1\|AOC54394.1\|3600794_3602021_-\|Transposase	gnl\|CDD\|376574	pfam01610, DDE_Tnp_ISL3, Transposase. Transposase proteins are necessary for efficient DNA transposition. Contains transposases for IS204, IS1001, IS1096 and IS1165.	4.17478e-80
CP012375.1\|AOC54390.1\|3596828_3598994_+\|hypothetical-protein	gnl\|CDD\|226428	COG3914, Spy, Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones].	3.38343e-162
CP012375.1\|AOC54405.1\|3617058_3619794_-\|CRISPR-associated-helicase-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	3.32697e-43
CP012375.1\|AOC54400.1\|3613727_3614000_-\|CRISPR-associated-protein-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	5.25525e-37
CP012375.1\|AOC54393.1\|3599976_3600471_+\|Mobile-element-protein	gnl\|CDD\|315923	pfam13358, DDE_3, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	2.32222e-41
CP012375.1\|AOC54402.1\|3615022_3615616_-\|CRISPR-associated-RecB-family-exonuclease-Cas4	gnl\|CDD\|187768	cd09637, Cas4_I-A_I-B_I-C_I-D_II-B, CRISPR/Cas system-associated protein Cas4. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas4 is RecB-like nuclease with three-cysteine C-terminal cluster.	3.46773e-53
CP012375.1\|AOC54401.1\|3614012_3615017_-\|CRISPR-associated-protein-Cas1	gnl\|CDD\|274976	TIGR04093, hypothetical_protein_L8106_25395, CRISPR-associated endonuclease Cas1, subtype CYANO. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes a clade of Cas1 limited to the CYANO subtype of CRISPR/Cas system and most often the type found there.	9.27882e-142
CP012375.1\|AOC54389.1\|3594657_3596811_+\|hypothetical-protein	gnl\|CDD\|226428	COG3914, Spy, Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones].	3.2671e-152
CP012375.1\|AOC54392.1\|3599578_3600022_+\|Mobile-element-protein	gnl\|CDD\|225949	COG3415, COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	5.76321e-21
CP012375.1\|AOC54404.1\|3616451_3617018_-\|Protein-of-unknown-function-DUF820	gnl\|CDD\|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	1.55985e-27
CP012375.1\|AOC54388.1\|3594009_3594318_+\|Cytochrome-c,-class-I	gnl\|CDD\|379187	pfam13442, Cytochrome_CBB3, Cytochrome C oxidase, cbb3-type, subunit III.	8.74455e-09
CP012375.1\|AOC54398.1\|3610024_3611521_+\|transposase	gnl\|CDD\|290319	pfam13586, DDE_Tnp_1_2, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis.	2.0941e-34

>CP012375.1|AOC54397.1|3607916_3609065_-|Mobile-element-protein
MISELYQKVLENELGRARYLLLLMIVGTLQILKQAKLEILAEALPIPILFESRRKKLKRFLKLEILNIEKIWFLCLKEMLKQQQRFTTKGLAYIAIDRTSWGAINILMVSLIYDKRAIPIYWEILDKKGSSNLEEQQRVLEKTLTVLSGHKIVVLGDREFCSVSLGKWLQKQSLYFCLRQKKSTNVKTKEGIYQEMRELGLSPGTQLFLNDVNITKEQGFGQFNLAGKWKKTYGGFQTKEPWYILTNFVDLETAIIAYQKRFDIEEMFRDFKSGGYSLEGSQLAPQYLSKLIIVIAIAYTSATLQGKKIKDMGIQKYVTRPEKRYKGQRRHSSFYVGQHLYHWLQLHQMFQKNIEELMQISRYRLKDYIKGQRAISLALSTF
>CP012375.1|AOC54396.1|3607558_3607690_+|hypothetical-protein
MELPIKHCLLAVLLFQSLIGFKINWNSQNNVAGAVNLLQRFNP
>CP012375.1|AOC54395.1|3604511_3604670_+|hypothetical-protein
MFQSLIGFKINWNVSSDEEAVVFYEFQSLIGFKINWNSGSKELGLRCKSFNP
>CP012375.1|AOC54394.1|3600794_3602021_-|Transposase
MPSNPQLKLMTELLHLEGVVVTNYQIITDIGIVLHLENMSRESQCIHCGSKTEKVHQNNELTIRDLPFGEQALYLRINRRQMRCEKCGKKFTEELNYLPKKRTYTDRFRKKIVAEVLNSDLKNTAERNGVSEQEIETMLKDLGEELITAKPQGLKKLGIDEIAMIKGKGNYYAVLVNIDTGKIIGLGEKRTEEALTEYLKHWGEEVLSQIEEVSIDLWIGYKNVAEKLMPQAQIVGDRFHVMKQVNNELDEARKEVKREAAKIKNKKNKENILAGIAKSKYALLKNEGDLVEKERKKLEEIYKVSPKLGEMHKLKEEFREVFEKNTEGNEGLFALSDWLKKAMAYFPKSCQTIRRWIDEITAYFDNRTTQGTVEGINNKLKVIKRRGYGFRNFKNFSLRCLLNWHFAS
>CP012375.1|AOC54393.1|3599976_3600471_+|Mobile-element-protein
MEYWSQVREIEASKLIFIDESGVNLALLRLYARALIGRRDRGRKPQKRGRNISIISAISLEKVVASVNIYGAVDAVTFEGFILKEVLPKIKEGDCLLMDNAKIHLGEMVREIIEQEKARLIYLPPYSPEFSPIENFWSKVKAILRKLKARTYKDLIEGIELAML
>CP012375.1|AOC54392.1|3599578_3600022_+|Mobile-element-protein
MRPYSVDFRQKIIDVWKKEKISIRGLAQRFDVAKSFIQKLLKQHKETGDIRPRPQGGSPPTKLNSEQLIILIEIIESNNDATLEELSDLLYEKTQVKVSRATLGRLTQKLNYSFKKKHYTRRKKKVTGYSKKEWNTGLKFGKLRHQN
>CP012375.1|AOC54391.1|3599006_3599540_+|hypothetical-protein
MQLHQDIQPHLNDNNYQLVLQFYEQLIENNSPVIEDYFYLGLAYLLQDREEDAQATWLLVLSQAAESELSGWIKTLTQILDAEATRQENSQRLETSYLIRLHLQNLNPSFLNNLLHLMELEIQFQIFAMEKCHDWCVFELLENTATAAINLDLLLGVTEKVLIYPSTYSTSWSYEVQ
>CP012375.1|AOC54390.1|3596828_3598994_+|hypothetical-protein
MSWQNEVKTALENNQYDIVSQFYEELIERETTEISHYWYLGLAYLLEDREEDAQATWLLVLSQAAESELSGWIKTLTQILDAEATRQENSQRLETSYLIRLHLQNLNPSFLNNLLHLMELEIQFQIFAMEKCHDWCVFELLENTATAAINLDLLLRVTEKVLIYPCTDTIHFLELAALHINNPEIIATKVISAIVNYAYQQKQSVFAINLVELCLRFLPEDLYLQNSLFNLYKTTTIDYKKSLEIADNFYKSCQTTTEKLLGISLVIAISQAKGDWGNLPKFIDELIQLIERQINAKQFNARPFIIDSILGVTICLPYYQDNPKINRYLQSKLAEIFQADVRTRYNYIAPVSSPKSPARKIKIGYIAYTLRRHSVGWLSRWLFHYHNRDKFEIYTYFVNQAADEITEKWFINNSDYSYNLPAKIEQITAQIRQDNLDILVDLDSLTNNTTCLVIALKPAPIQVTWLGLDASGIPAIDYFIADNYVLPENAEEIYSEKIIRLPNSYLSVDGFEVGVPTRRRTDLNIPDDAIIYLTVQSGLKRTLNMIYLQLQILQQVPNSYLLIKGFADKETIRELFLKSADELGISQDRLRFLPNDFNEETHRANLGIADIVLDTYPYSGATTTLETLWMGIPLVTRVGEQFAARNSYTFMKNAGISQGIAWSDEEYVQWGIKLGLDKNLREEVRWKLRKSRHTSPLWNSKQFTRNLETAYQQMWNIYCQS
>CP012375.1|AOC54389.1|3594657_3596811_+|hypothetical-protein
MSWHSQVEPAIIQGDFWQVSQFYEELIEREPLEISHYWYLGLAYLLEAREEEAQTTWLFVLSQGDEQEMNSWTVDLVNILDGEARRQVEVKNWQLSWVIRQHIYQINPDNLENLLYLVLLEIKLEYFYPQKLKDWQIVDLINSDKLENFDINLLLHTIYKLLDWPAQEVLDIIITLLKIDSQQSAILEIIEQHIEKIYYTDKTNAVILTLSCLDIIPDHLVLLHKIHQYYIDTGNFELALETANKIKNLSNDKAAKLYGIYLLLYTEILAGNWLNIDNKTQEYYQAIQNNLERGQCPMSNQAEVISITSPLAYLKDDLVGNRWLTNQLAKLFQEAVRKRFNQVTIESQKPKDVNKKLNIGYIAHTLRRHSVGFLSRWLIHYHQRDNFNIHLYLVNQVEDDITEQWFKNKVDKYNNLPANPQIIAEKINQDNIDILVDLDSITKDNTCRVMALKPAPIQITWLGLDATGIPAIDYFLVDNLVLEKNAQEFYQEKLWRLPNCYLAVDGFEIGIPTLTRQDLNIPADAITYLTLQVGLKRNPATIRLQMQIIKAVPNSYLLIKGAGSEKLINDLFISIAKEEGIDENRLRFLSGVANEEIHRANLQIADVVLDTYPYSGATTTLETLWMGIPVVTKVGQQWSSRNSYTFMTHGGISEGIAWSDEEYVQWGIKLGKDEQLRRKVIAKLDESRQTSPIWNARQFTKDVENAYRQMWQIYCES
>CP012375.1|AOC54388.1|3594009_3594318_+|Cytochrome-c,-class-I
MFLISTFLITFHLAKMSDPYIKEVLSRQGNVSRGYEIFQINCAACHGQFADGIVGPSLEDVSRRKSRISLIEQVISGKTPPMPKFQPDTQAMADLLVYLENL
>CP012375.1|AOC54398.1|3610024_3611521_+|transposase
MYRKSELPSTPPENFELPFEGKLSQDNRWVIMANLIPWSEFEAEYASLFSEEMGTPAKTFRTALGALIIKEKLGTSDRETVEQIKENPYLQYFLGFSSYSNEPRFEASMLVHFRERITLELINKVNRFMVKNSREIKEEENTEKKLESETQSQPENRGKLILDASCAPADISYPTDLNLLNQGRKQTEKIIDILYETLKGKLVQKPRTYRLLARKSYLEVAKKRKPTVKQRRKALKRQLQYLKRNLDHIEQLLAEGASLQSLKKRDYKLLLVVTEVYRQQLWMYQNNKQSIEDRIVSLTQPHIRPIVRGKAGKPVEFGAKFSASCIDGYIFLDRISWDNFNESGDLKAQIEAYYDYTGYYPESVHVDKIYRTRENRAWCKERGIRISGPPLGRPAKNVSKEQKKQATDDERIRNCIEGKFGQGKRRFSLGKVMAKLPHTSFSAIAITFLVMNLSNLLRQVFWAFLCLKWKNSTFSRSMIRISYNLKINQQLKLMLVAK
>CP012375.1|AOC54399.1|3612664_3612799_+|hypothetical-protein
MFQSLIGFKINWNALDDLLQSLEGLFQSLIGFKINWNAVKAQPC
>CP012375.1|AOC54400.1|3613727_3614000_-|CRISPR-associated-protein-Cas2
MYFVISYDISDDKRRTKIHNTLKSYGQRVQYSVFECDLTDTQYAKLRGRLSKLIKPDTDSIRFYFLCACCRGKVERIGGELPRDNTIFFV
>CP012375.1|AOC54401.1|3614012_3615017_-|CRISPR-associated-protein-Cas1
MGTVYVTREDAFLGKNDERLTVKASKETILDVPLLNVEGVVLFGRGSLSPALVIELLERHIPLSFVTVTGKYLGRLEPEMTKNIFVRRAQWQAAGDSPKAIHLVRGFVRGKLKNYRNILLRRQRDRKELDLQTAIACLEAAIGSIETTSAIDSLRGLEGAGSAAYFSCFDSLILGDTFTFASRNRRPPRDPVNSLLSLGYALLRHDVQSAINLVGFDPYLGYLHYQRYGRPSLALDLMEEFRAIVVDAVVLNGVNHPYLTPEHFTTEPLSGAVSLTREGLQIFLRLYEQKKQSKFKHPVMSKQCTYQEAFEIQARLMAKYLMDETDKYPPLILK
>CP012375.1|AOC54402.1|3615022_3615616_-|CRISPR-associated-RecB-family-exonuclease-Cas4
MDESDYIPIAALNHYAYCPHRCWRMFVAGEFLNNSYTIEGTNLHERVHTVGAGNREEIWQIRAIWLKSDNYRLIGKADLIESHDGEFIPVEYKRGSKGEWDNDELQVCAQAICLEEMTGKKLDTGYIYYASSHQRQPVAIDLALRQRAIATIRAIETLIQTGKMPLAVYSPRCKGCSLFDRCLPRLTEKVQRYQEED
>CP012375.1|AOC54403.1|3615618_3616452_-|CRISPR-repeat-RNA-endoribonuclease-Cas6
MPYSLVLNLTPRSPIYPNFLTGRHLHALFLTLVSSVDQELGNILHASDADKAFTLSPLQMQSRRKTINFPRWRHEREIAPETPCWWRISLLDDRLFGKLTPLWLNLNPKQPWHLGSADLVITSVLATPQSVQPWANSCTYQYLYENASETNREFDFLFATPVTFRQGKFDSALPTRELVFNSLLSRWNRYSGISFDSIALESIFPSFFDIQTKLTDEAYKNQSIGCVGEIHYRLLGEVEPAKIKAINALADFALYAGVGRKTTMGMGMTRRISKDKR
>CP012375.1|AOC54404.1|3616451_3617018_-|Protein-of-unknown-function-DUF820
MTLISSKSLTLPEFLSLTPPDGDITYELVDGEAIPKMSPKFFHSRLTGALFLLLDRWNQGRGEVGIEWAIVLSKNDRDWCPVPDLLYISPERLGDITLTDEACPVPPELVIEIISPEQSFSSLSEKAVDYLKAGVSRVWIVDPQAKQITIFYPDAPPAIKKGDDEMSDILLPDLTLTPGQIFAKARLS
>CP012375.1|AOC54405.1|3617058_3619794_-|CRISPR-associated-helicase-Cas3
MSKSNPQPFFKFGRVFFPGEPTIAPDKILFQPLGNHVGNVRQLARKWQDGNFSLERVIEGINLHDKAKPQTFKIRVETNKQGEFTKYTYSFKGHRFKVDNPQNLWVQALARGHHDYSTKEIIKDTYQLKKDTEYQKIFSKDPLQYAKELYILEMCDQIEAELACRVIGDDEQAKSRTFMDFTITKGTSEDSNHRVFYLDPYPFKEPTITLNFRSWTYNLSDEDKNQLQQLHENRKDKELGSKLNTLVKEWWKKNEHTISEDRAITAIIKPDNSNTYSPSEKSENAIFWWYEELANFQPNPMQEEVFQTMVKNQHPAFILKAPTGAGKFEAIIIPFLAMLSTKEDRPRLIIPLPARSLLEDQKQRCDKYLKQFSLLHKGREVSLVIDTGTEMNRYVYLDGEVKSSNNSRRHLYKGDIILTTIDKFIYRYFGYGDKQKSFIFPYRIYHGNTLICFDEAHTYDDISFTNFCSLVKALYEAGCSLVLMTATLSQNHLERFDYLADNMIDYIDVQDNLEKLNNFYQQILKQDYSNLKQFEFYEEPTNLQQKLTSIALEEWNSNPSHRIIVSVETVKDAIAIYEKIKQTLNIKFSEKKEFLFLYHGRLSDIPKTSHYSRTNLYQRLKERDENDQAYILVTTSAIEVGCDLNSTRLITQLCNPESLIQRAGRCNRKGNVEDAKIIVIGNNIPEFVNTLSEAELENYKTILKGLHDQNFDPKAIMNCVSTKQTIDDYRVVELFSLLQDYVYNADLTCQSAHEKGLVITRSWTPSVTLVYDDGKQGDSLEKIVKESPQIQVSIDRLILKKNNEGNYTNQYANVSVYEWIYDKEETRYKLEPLKYWGCAYSKELVIKVCAVQEGAISDSFEPYSYDHELGFKDLPGVFIKWRSNGYQERLQYNPTKDRSVVINYTSALTQD
>CP012375.1|AOC54406.1|3619786_3620476_-|hypothetical-protein
MLSEGLDIPETSINKENPPYFTLPRQYIALGAYPVLDKWSGVHRTHRKGTRSFNHDVFSRLYIDGDRENFQLHTWEYFIAEELIGYVVSESKSSLEAFSNLQGVGCKIGKEGFAVIDEVSESIRLQRKILSAHPSTVVPMEALIQRNPCINRCDIYNLYRHEWSADQTQDEDKGLFDTERSPINGFIPFVAAYYPEKAHPLPTLDFYTDGNLQIPVALVELLQRESINV
>CP012375.1|AOC54407.1|3620614_3621508_-|hypothetical-protein
MATESKVTTGLPKTDANKPRLHFDIYAILEGSQELYLGHEVQVNVNLVEIVKLSTKDGKEIEKCYISPTKRRGVERRCLLWSPVKSGELLGDKQNCGIPKTCAEPTCPICATFGALDPGKRTLIGRVTHGGGVAIQEIYPVEKQRAMHPALLVNRNDETPTPFRREYNQPGILYPVYNHALSITDQDFSAVAYAFLDSLPRIGSGNPKGIAIAETDDRTPLLVLDRYLSPRGKRPIVSPSETDPQKAINDFLYLALYPETNFTNHIQEAHFDRWIGNEALAKLQEYSAIFVDTVLQA

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Crispr_ID: CP012375_22

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP012375_22

3611590-3613494

TypeV

I-D,II-B

Consensus_repeat	Method
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	PILER-CR
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CRISPRCasFinder
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CRT

26 spacers

cas2,cas1,cas4,cas6,cas3,cas5,cas7,cas8b5

The CRISPR arrays of CP012375_22

>merge|CP012375|22|3611590-3613494|PILER-CR,CRISPRCasFinder,CRT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACTAGAGCGTCTAGGAGGGCTGCTTATGGCGTAATCGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACACTCGCTAAAGTCTTTGGGGGGAGATGTAGAAATGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACATGGGTTAGTCTGTGGGGATAGTATAGAGAAAACTGGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACACAGACTCAACCTTATCAGCAATCTCAACGGTATTGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACAAGATCGATCTGATCGAGCGATCATCTTCTTTCTTGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACATTTAGTGGAATTGGCTAATCAAGCTGGTGATGGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACTGCGCTTTTGATCTCAATAACTCAGGATTTAATAGGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACGAAACCGAAGATTAATTTTATCAGACTCAAACCTGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACTGCCGAAAGGCAAATTCGCAACTTTTGCGGATTTGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACAAGCTTTCTTTCAGTACCCGGCTCACAAGCCTGAGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACTTATTTGATTCCGATAAGCTATTAGAGCAGTTACAAGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACCTTCTTGTCTGAGGATACTAAATAATCTAGGTTTTGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACAACGGACGCGATCGGAACCGTACCGGGTGAGGGAATGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACAAAAGACAAGCTTTTGGGGACTTGGCAAAAAGCCAAGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACGACTTAAGGCCGTCATGGCAGACCGGGATGTAAATGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACGCATTAGATGATTTACTGCAATCCCTTGAGGGATTGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACGCCGTCAAGGCTCAACCCTGCTAACTGGTAAACTCGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACTAGATGGTTTTTTAGGGTGTCTAGAATACTGTTTAGGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACCCTTCCTTGCTTTAAGCTTGGCAGCGTACTTGTCTGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACCTTAATAGCGAGTCACCCTTGTCGGGGTTAGTCATTGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACGGAAATTTCCCCACTGAGAAAGCAGTCCATTAGCGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACCGTTGACGGCTGCCGTCCGGGAACCGGCGATGAGAGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACAGTCTTCTGGCAATTAGGCCGCGCCCTAAAATTGTGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACCCTCACTTTTATACGATTTTATTAATCAATGCCTAGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACAAATTACGGTTTTTTCTGGATCGGCGCGAAGGTTGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACGAGATCACTTTTACTAATATCCTACTCCAAAAAAGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC

>CP012375|22|5|3611590-3613494|PILER-CR
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TAGAGCGTCTAGGAGGGCTGCTTATGGCGTAATC
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ACTCGCTAAAGTCTTTGGGGGGAGATGTAGAAAT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ATGGGTTAGTCTGTGGGGATAGTATAGAGAAAACTG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ACAGACTCAACCTTATCAGCAATCTCAACGGTATT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AAGATCGATCTGATCGAGCGATCATCTTCTTTCTT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ATTTAGTGGAATTGGCTAATCAAGCTGGTGATG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TGCGCTTTTGATCTCAATAACTCAGGATTTAATAG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GAAACCGAAGATTAATTTTATCAGACTCAAACCT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TGCCGAAAGGCAAATTCGCAACTTTTGCGGATTT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AAGCTTTCTTTCAGTACCCGGCTCACAAGCCTGA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TTATTTGATTCCGATAAGCTATTAGAGCAGTTACAA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CTTCTTGTCTGAGGATACTAAATAATCTAGGTTTT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AACGGACGCGATCGGAACCGTACCGGGTGAGGGAAT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AAAAGACAAGCTTTTGGGGACTTGGCAAAAAGCCAA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GACTTAAGGCCGTCATGGCAGACCGGGATGTAAAT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GCATTAGATGATTTACTGCAATCCCTTGAGGGATT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GCCGTCAAGGCTCAACCCTGCTAACTGGTAAACTC
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TAGATGGTTTTTTAGGGTGTCTAGAATACTGTTTAG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CCTTCCTTGCTTTAAGCTTGGCAGCGTACTTGTCT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CTTAATAGCGAGTCACCCTTGTCGGGGTTAGTCATT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GGAAATTTCCCCACTGAGAAAGCAGTCCATTAGC
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CGTTGACGGCTGCCGTCCGGGAACCGGCGATGAGA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AGTCTTCTGGCAATTAGGCCGCGCCCTAAAATTGT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CCTCACTTTTATACGATTTTATTAATCAATGCCTA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AAATTACGGTTTTTTCTGGATCGGCGCGAAGGTT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GAGATCACTTTTACTAATATCCTACTCCAAAAAA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC

>CP012375|22|21|3611590-3613494|CRISPRCasFinder
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TAGAGCGTCTAGGAGGGCTGCTTATGGCGTAATC
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ACTCGCTAAAGTCTTTGGGGGGAGATGTAGAAAT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ATGGGTTAGTCTGTGGGGATAGTATAGAGAAAACTG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ACAGACTCAACCTTATCAGCAATCTCAACGGTATT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AAGATCGATCTGATCGAGCGATCATCTTCTTTCTT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ATTTAGTGGAATTGGCTAATCAAGCTGGTGATG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TGCGCTTTTGATCTCAATAACTCAGGATTTAATAG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GAAACCGAAGATTAATTTTATCAGACTCAAACCT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TGCCGAAAGGCAAATTCGCAACTTTTGCGGATTT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AAGCTTTCTTTCAGTACCCGGCTCACAAGCCTGA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TTATTTGATTCCGATAAGCTATTAGAGCAGTTACAA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CTTCTTGTCTGAGGATACTAAATAATCTAGGTTTT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AACGGACGCGATCGGAACCGTACCGGGTGAGGGAAT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AAAAGACAAGCTTTTGGGGACTTGGCAAAAAGCCAA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GACTTAAGGCCGTCATGGCAGACCGGGATGTAAAT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GCATTAGATGATTTACTGCAATCCCTTGAGGGATT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GCCGTCAAGGCTCAACCCTGCTAACTGGTAAACTC
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TAGATGGTTTTTTAGGGTGTCTAGAATACTGTTTAG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CCTTCCTTGCTTTAAGCTTGGCAGCGTACTTGTCT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CTTAATAGCGAGTCACCCTTGTCGGGGTTAGTCATT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GGAAATTTCCCCACTGAGAAAGCAGTCCATTAGC
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CGTTGACGGCTGCCGTCCGGGAACCGGCGATGAGA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AGTCTTCTGGCAATTAGGCCGCGCCCTAAAATTGT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CCTCACTTTTATACGATTTTATTAATCAATGCCTA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AAATTACGGTTTTTTCTGGATCGGCGCGAAGGTT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GAGATCACTTTTACTAATATCCTACTCCAAAAAA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC

>CP012375|22|4|3611590-3613494|CRT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TAGAGCGTCTAGGAGGGCTGCTTATGGCGTAATC
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ACTCGCTAAAGTCTTTGGGGGGAGATGTAGAAAT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ATGGGTTAGTCTGTGGGGATAGTATAGAGAAAACTG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ACAGACTCAACCTTATCAGCAATCTCAACGGTATT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AAGATCGATCTGATCGAGCGATCATCTTCTTTCTT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ATTTAGTGGAATTGGCTAATCAAGCTGGTGATG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TGCGCTTTTGATCTCAATAACTCAGGATTTAATAG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GAAACCGAAGATTAATTTTATCAGACTCAAACCT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TGCCGAAAGGCAAATTCGCAACTTTTGCGGATTT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AAGCTTTCTTTCAGTACCCGGCTCACAAGCCTGA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TTATTTGATTCCGATAAGCTATTAGAGCAGTTACAA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CTTCTTGTCTGAGGATACTAAATAATCTAGGTTTT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AACGGACGCGATCGGAACCGTACCGGGTGAGGGAAT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AAAAGACAAGCTTTTGGGGACTTGGCAAAAAGCCAA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GACTTAAGGCCGTCATGGCAGACCGGGATGTAAAT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GCATTAGATGATTTACTGCAATCCCTTGAGGGATT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GCCGTCAAGGCTCAACCCTGCTAACTGGTAAACTC
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TAGATGGTTTTTTAGGGTGTCTAGAATACTGTTTAG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CCTTCCTTGCTTTAAGCTTGGCAGCGTACTTGTCT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CTTAATAGCGAGTCACCCTTGTCGGGGTTAGTCATT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GGAAATTTCCCCACTGAGAAAGCAGTCCATTAGC
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CGTTGACGGCTGCCGTCCGGGAACCGGCGATGAGA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AGTCTTCTGGCAATTAGGCCGCGCCCTAAAATTGT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CCTCACTTTTATACGATTTTATTAATCAATGCCTA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AAATTACGGTTTTTTCTGGATCGGCGCGAAGGTT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GAGATCACTTTTACTAATATCCTACTCCAAAAAA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC

Protein	Signature genes	Signature genes Name	Protein_function
CP012375.1\|AOC54403.1\|3615618_3616452_-\|CRISPR-repeat-RNA-endoribonuclease-Cas6	cas6	COG5551_cas6_CAS-III	gnl\|CDD\|227838
CP012375.1\|AOC54394.1\|3600794_3602021_-\|Transposase	unknown	unknown	gnl\|CDD\|376574
CP012375.1\|AOC54408.1\|3621510_3624042_-\|hypothetical-protein	cas8b5	mkCas0131_cas8b5_CAS-I-B	unknown
CP012375.1\|AOC54390.1\|3596828_3598994_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226428
CP012375.1\|AOC54404.1\|3616451_3617018_-\|Protein-of-unknown-function-DUF820	unknown	unknown	gnl\|CDD\|99749
CP012375.1\|AOC54400.1\|3613727_3614000_-\|CRISPR-associated-protein-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
CP012375.1\|AOC54393.1\|3599976_3600471_+\|Mobile-element-protein	unknown	unknown	gnl\|CDD\|315923
CP012375.1\|AOC54401.1\|3614012_3615017_-\|CRISPR-associated-protein-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|274976
CP012375.1\|AOC54407.1\|3620614_3621508_-\|hypothetical-protein	cas7	cls000038_cas7_CAS-I-B	unknown
CP012375.1\|AOC54405.1\|3617058_3619794_-\|CRISPR-associated-helicase-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
CP012375.1\|AOC54395.1\|3604511_3604670_+\|hypothetical-protein	unknown	unknown	unknown
CP012375.1\|AOC54389.1\|3594657_3596811_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226428
CP012375.1\|AOC54402.1\|3615022_3615616_-\|CRISPR-associated-RecB-family-exonuclease-Cas4	cas4	cd09637_cas4_CAS-I:CAS-II:CAS-V	gnl\|CDD\|187768
CP012375.1\|AOC54392.1\|3599578_3600022_+\|Mobile-element-protein	unknown	unknown	gnl\|CDD\|225949
CP012375.1\|AOC54396.1\|3607558_3607690_+\|hypothetical-protein	unknown	unknown	unknown
CP012375.1\|AOC54409.1\|3624129_3624294_-\|hypothetical-protein	unknown	unknown	unknown
CP012375.1\|AOC54397.1\|3607916_3609065_-\|Mobile-element-protein	unknown	unknown	unknown
CP012375.1\|AOC54406.1\|3619786_3620476_-\|hypothetical-protein	cas5	cls000047_cas5_CAS-I-B	unknown
CP012375.1\|AOC54391.1\|3599006_3599540_+\|hypothetical-protein	unknown	unknown	unknown
CP012375.1\|AOC54398.1\|3610024_3611521_+\|transposase	unknown	unknown	gnl\|CDD\|290319

Protein	Function_ID	Function_description	E-value
CP012375.1\|AOC54403.1\|3615618_3616452_-\|CRISPR-repeat-RNA-endoribonuclease-Cas6	gnl\|CDD\|227838	COG5551, COG5551, CRISPR system related protein, RAMP superfamily [Defense mechanisms].	2.28864e-45
CP012375.1\|AOC54394.1\|3600794_3602021_-\|Transposase	gnl\|CDD\|376574	pfam01610, DDE_Tnp_ISL3, Transposase. Transposase proteins are necessary for efficient DNA transposition. Contains transposases for IS204, IS1001, IS1096 and IS1165.	4.17478e-80
CP012375.1\|AOC54390.1\|3596828_3598994_+\|hypothetical-protein	gnl\|CDD\|226428	COG3914, Spy, Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones].	3.38343e-162
CP012375.1\|AOC54405.1\|3617058_3619794_-\|CRISPR-associated-helicase-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	3.32697e-43
CP012375.1\|AOC54400.1\|3613727_3614000_-\|CRISPR-associated-protein-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	5.25525e-37
CP012375.1\|AOC54393.1\|3599976_3600471_+\|Mobile-element-protein	gnl\|CDD\|315923	pfam13358, DDE_3, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	2.32222e-41
CP012375.1\|AOC54402.1\|3615022_3615616_-\|CRISPR-associated-RecB-family-exonuclease-Cas4	gnl\|CDD\|187768	cd09637, Cas4_I-A_I-B_I-C_I-D_II-B, CRISPR/Cas system-associated protein Cas4. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas4 is RecB-like nuclease with three-cysteine C-terminal cluster.	3.46773e-53
CP012375.1\|AOC54401.1\|3614012_3615017_-\|CRISPR-associated-protein-Cas1	gnl\|CDD\|274976	TIGR04093, hypothetical_protein_L8106_25395, CRISPR-associated endonuclease Cas1, subtype CYANO. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes a clade of Cas1 limited to the CYANO subtype of CRISPR/Cas system and most often the type found there.	9.27882e-142
CP012375.1\|AOC54389.1\|3594657_3596811_+\|hypothetical-protein	gnl\|CDD\|226428	COG3914, Spy, Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones].	3.2671e-152
CP012375.1\|AOC54392.1\|3599578_3600022_+\|Mobile-element-protein	gnl\|CDD\|225949	COG3415, COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	5.76321e-21
CP012375.1\|AOC54404.1\|3616451_3617018_-\|Protein-of-unknown-function-DUF820	gnl\|CDD\|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	1.55985e-27
CP012375.1\|AOC54398.1\|3610024_3611521_+\|transposase	gnl\|CDD\|290319	pfam13586, DDE_Tnp_1_2, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis.	2.0941e-34

>CP012375.1|AOC54398.1|3610024_3611521_+|transposase
MYRKSELPSTPPENFELPFEGKLSQDNRWVIMANLIPWSEFEAEYASLFSEEMGTPAKTFRTALGALIIKEKLGTSDRETVEQIKENPYLQYFLGFSSYSNEPRFEASMLVHFRERITLELINKVNRFMVKNSREIKEEENTEKKLESETQSQPENRGKLILDASCAPADISYPTDLNLLNQGRKQTEKIIDILYETLKGKLVQKPRTYRLLARKSYLEVAKKRKPTVKQRRKALKRQLQYLKRNLDHIEQLLAEGASLQSLKKRDYKLLLVVTEVYRQQLWMYQNNKQSIEDRIVSLTQPHIRPIVRGKAGKPVEFGAKFSASCIDGYIFLDRISWDNFNESGDLKAQIEAYYDYTGYYPESVHVDKIYRTRENRAWCKERGIRISGPPLGRPAKNVSKEQKKQATDDERIRNCIEGKFGQGKRRFSLGKVMAKLPHTSFSAIAITFLVMNLSNLLRQVFWAFLCLKWKNSTFSRSMIRISYNLKINQQLKLMLVAK
>CP012375.1|AOC54397.1|3607916_3609065_-|Mobile-element-protein
MISELYQKVLENELGRARYLLLLMIVGTLQILKQAKLEILAEALPIPILFESRRKKLKRFLKLEILNIEKIWFLCLKEMLKQQQRFTTKGLAYIAIDRTSWGAINILMVSLIYDKRAIPIYWEILDKKGSSNLEEQQRVLEKTLTVLSGHKIVVLGDREFCSVSLGKWLQKQSLYFCLRQKKSTNVKTKEGIYQEMRELGLSPGTQLFLNDVNITKEQGFGQFNLAGKWKKTYGGFQTKEPWYILTNFVDLETAIIAYQKRFDIEEMFRDFKSGGYSLEGSQLAPQYLSKLIIVIAIAYTSATLQGKKIKDMGIQKYVTRPEKRYKGQRRHSSFYVGQHLYHWLQLHQMFQKNIEELMQISRYRLKDYIKGQRAISLALSTF
>CP012375.1|AOC54396.1|3607558_3607690_+|hypothetical-protein
MELPIKHCLLAVLLFQSLIGFKINWNSQNNVAGAVNLLQRFNP
>CP012375.1|AOC54395.1|3604511_3604670_+|hypothetical-protein
MFQSLIGFKINWNVSSDEEAVVFYEFQSLIGFKINWNSGSKELGLRCKSFNP
>CP012375.1|AOC54394.1|3600794_3602021_-|Transposase
MPSNPQLKLMTELLHLEGVVVTNYQIITDIGIVLHLENMSRESQCIHCGSKTEKVHQNNELTIRDLPFGEQALYLRINRRQMRCEKCGKKFTEELNYLPKKRTYTDRFRKKIVAEVLNSDLKNTAERNGVSEQEIETMLKDLGEELITAKPQGLKKLGIDEIAMIKGKGNYYAVLVNIDTGKIIGLGEKRTEEALTEYLKHWGEEVLSQIEEVSIDLWIGYKNVAEKLMPQAQIVGDRFHVMKQVNNELDEARKEVKREAAKIKNKKNKENILAGIAKSKYALLKNEGDLVEKERKKLEEIYKVSPKLGEMHKLKEEFREVFEKNTEGNEGLFALSDWLKKAMAYFPKSCQTIRRWIDEITAYFDNRTTQGTVEGINNKLKVIKRRGYGFRNFKNFSLRCLLNWHFAS
>CP012375.1|AOC54393.1|3599976_3600471_+|Mobile-element-protein
MEYWSQVREIEASKLIFIDESGVNLALLRLYARALIGRRDRGRKPQKRGRNISIISAISLEKVVASVNIYGAVDAVTFEGFILKEVLPKIKEGDCLLMDNAKIHLGEMVREIIEQEKARLIYLPPYSPEFSPIENFWSKVKAILRKLKARTYKDLIEGIELAML
>CP012375.1|AOC54392.1|3599578_3600022_+|Mobile-element-protein
MRPYSVDFRQKIIDVWKKEKISIRGLAQRFDVAKSFIQKLLKQHKETGDIRPRPQGGSPPTKLNSEQLIILIEIIESNNDATLEELSDLLYEKTQVKVSRATLGRLTQKLNYSFKKKHYTRRKKKVTGYSKKEWNTGLKFGKLRHQN
>CP012375.1|AOC54391.1|3599006_3599540_+|hypothetical-protein
MQLHQDIQPHLNDNNYQLVLQFYEQLIENNSPVIEDYFYLGLAYLLQDREEDAQATWLLVLSQAAESELSGWIKTLTQILDAEATRQENSQRLETSYLIRLHLQNLNPSFLNNLLHLMELEIQFQIFAMEKCHDWCVFELLENTATAAINLDLLLGVTEKVLIYPSTYSTSWSYEVQ
>CP012375.1|AOC54390.1|3596828_3598994_+|hypothetical-protein
MSWQNEVKTALENNQYDIVSQFYEELIERETTEISHYWYLGLAYLLEDREEDAQATWLLVLSQAAESELSGWIKTLTQILDAEATRQENSQRLETSYLIRLHLQNLNPSFLNNLLHLMELEIQFQIFAMEKCHDWCVFELLENTATAAINLDLLLRVTEKVLIYPCTDTIHFLELAALHINNPEIIATKVISAIVNYAYQQKQSVFAINLVELCLRFLPEDLYLQNSLFNLYKTTTIDYKKSLEIADNFYKSCQTTTEKLLGISLVIAISQAKGDWGNLPKFIDELIQLIERQINAKQFNARPFIIDSILGVTICLPYYQDNPKINRYLQSKLAEIFQADVRTRYNYIAPVSSPKSPARKIKIGYIAYTLRRHSVGWLSRWLFHYHNRDKFEIYTYFVNQAADEITEKWFINNSDYSYNLPAKIEQITAQIRQDNLDILVDLDSLTNNTTCLVIALKPAPIQVTWLGLDASGIPAIDYFIADNYVLPENAEEIYSEKIIRLPNSYLSVDGFEVGVPTRRRTDLNIPDDAIIYLTVQSGLKRTLNMIYLQLQILQQVPNSYLLIKGFADKETIRELFLKSADELGISQDRLRFLPNDFNEETHRANLGIADIVLDTYPYSGATTTLETLWMGIPLVTRVGEQFAARNSYTFMKNAGISQGIAWSDEEYVQWGIKLGLDKNLREEVRWKLRKSRHTSPLWNSKQFTRNLETAYQQMWNIYCQS
>CP012375.1|AOC54389.1|3594657_3596811_+|hypothetical-protein
MSWHSQVEPAIIQGDFWQVSQFYEELIEREPLEISHYWYLGLAYLLEAREEEAQTTWLFVLSQGDEQEMNSWTVDLVNILDGEARRQVEVKNWQLSWVIRQHIYQINPDNLENLLYLVLLEIKLEYFYPQKLKDWQIVDLINSDKLENFDINLLLHTIYKLLDWPAQEVLDIIITLLKIDSQQSAILEIIEQHIEKIYYTDKTNAVILTLSCLDIIPDHLVLLHKIHQYYIDTGNFELALETANKIKNLSNDKAAKLYGIYLLLYTEILAGNWLNIDNKTQEYYQAIQNNLERGQCPMSNQAEVISITSPLAYLKDDLVGNRWLTNQLAKLFQEAVRKRFNQVTIESQKPKDVNKKLNIGYIAHTLRRHSVGFLSRWLIHYHQRDNFNIHLYLVNQVEDDITEQWFKNKVDKYNNLPANPQIIAEKINQDNIDILVDLDSITKDNTCRVMALKPAPIQITWLGLDATGIPAIDYFLVDNLVLEKNAQEFYQEKLWRLPNCYLAVDGFEIGIPTLTRQDLNIPADAITYLTLQVGLKRNPATIRLQMQIIKAVPNSYLLIKGAGSEKLINDLFISIAKEEGIDENRLRFLSGVANEEIHRANLQIADVVLDTYPYSGATTTLETLWMGIPVVTKVGQQWSSRNSYTFMTHGGISEGIAWSDEEYVQWGIKLGKDEQLRRKVIAKLDESRQTSPIWNARQFTKDVENAYRQMWQIYCES
>CP012375.1|AOC54400.1|3613727_3614000_-|CRISPR-associated-protein-Cas2
MYFVISYDISDDKRRTKIHNTLKSYGQRVQYSVFECDLTDTQYAKLRGRLSKLIKPDTDSIRFYFLCACCRGKVERIGGELPRDNTIFFV
>CP012375.1|AOC54401.1|3614012_3615017_-|CRISPR-associated-protein-Cas1
MGTVYVTREDAFLGKNDERLTVKASKETILDVPLLNVEGVVLFGRGSLSPALVIELLERHIPLSFVTVTGKYLGRLEPEMTKNIFVRRAQWQAAGDSPKAIHLVRGFVRGKLKNYRNILLRRQRDRKELDLQTAIACLEAAIGSIETTSAIDSLRGLEGAGSAAYFSCFDSLILGDTFTFASRNRRPPRDPVNSLLSLGYALLRHDVQSAINLVGFDPYLGYLHYQRYGRPSLALDLMEEFRAIVVDAVVLNGVNHPYLTPEHFTTEPLSGAVSLTREGLQIFLRLYEQKKQSKFKHPVMSKQCTYQEAFEIQARLMAKYLMDETDKYPPLILK
>CP012375.1|AOC54402.1|3615022_3615616_-|CRISPR-associated-RecB-family-exonuclease-Cas4
MDESDYIPIAALNHYAYCPHRCWRMFVAGEFLNNSYTIEGTNLHERVHTVGAGNREEIWQIRAIWLKSDNYRLIGKADLIESHDGEFIPVEYKRGSKGEWDNDELQVCAQAICLEEMTGKKLDTGYIYYASSHQRQPVAIDLALRQRAIATIRAIETLIQTGKMPLAVYSPRCKGCSLFDRCLPRLTEKVQRYQEED
>CP012375.1|AOC54403.1|3615618_3616452_-|CRISPR-repeat-RNA-endoribonuclease-Cas6
MPYSLVLNLTPRSPIYPNFLTGRHLHALFLTLVSSVDQELGNILHASDADKAFTLSPLQMQSRRKTINFPRWRHEREIAPETPCWWRISLLDDRLFGKLTPLWLNLNPKQPWHLGSADLVITSVLATPQSVQPWANSCTYQYLYENASETNREFDFLFATPVTFRQGKFDSALPTRELVFNSLLSRWNRYSGISFDSIALESIFPSFFDIQTKLTDEAYKNQSIGCVGEIHYRLLGEVEPAKIKAINALADFALYAGVGRKTTMGMGMTRRISKDKR
>CP012375.1|AOC54404.1|3616451_3617018_-|Protein-of-unknown-function-DUF820
MTLISSKSLTLPEFLSLTPPDGDITYELVDGEAIPKMSPKFFHSRLTGALFLLLDRWNQGRGEVGIEWAIVLSKNDRDWCPVPDLLYISPERLGDITLTDEACPVPPELVIEIISPEQSFSSLSEKAVDYLKAGVSRVWIVDPQAKQITIFYPDAPPAIKKGDDEMSDILLPDLTLTPGQIFAKARLS
>CP012375.1|AOC54405.1|3617058_3619794_-|CRISPR-associated-helicase-Cas3
MSKSNPQPFFKFGRVFFPGEPTIAPDKILFQPLGNHVGNVRQLARKWQDGNFSLERVIEGINLHDKAKPQTFKIRVETNKQGEFTKYTYSFKGHRFKVDNPQNLWVQALARGHHDYSTKEIIKDTYQLKKDTEYQKIFSKDPLQYAKELYILEMCDQIEAELACRVIGDDEQAKSRTFMDFTITKGTSEDSNHRVFYLDPYPFKEPTITLNFRSWTYNLSDEDKNQLQQLHENRKDKELGSKLNTLVKEWWKKNEHTISEDRAITAIIKPDNSNTYSPSEKSENAIFWWYEELANFQPNPMQEEVFQTMVKNQHPAFILKAPTGAGKFEAIIIPFLAMLSTKEDRPRLIIPLPARSLLEDQKQRCDKYLKQFSLLHKGREVSLVIDTGTEMNRYVYLDGEVKSSNNSRRHLYKGDIILTTIDKFIYRYFGYGDKQKSFIFPYRIYHGNTLICFDEAHTYDDISFTNFCSLVKALYEAGCSLVLMTATLSQNHLERFDYLADNMIDYIDVQDNLEKLNNFYQQILKQDYSNLKQFEFYEEPTNLQQKLTSIALEEWNSNPSHRIIVSVETVKDAIAIYEKIKQTLNIKFSEKKEFLFLYHGRLSDIPKTSHYSRTNLYQRLKERDENDQAYILVTTSAIEVGCDLNSTRLITQLCNPESLIQRAGRCNRKGNVEDAKIIVIGNNIPEFVNTLSEAELENYKTILKGLHDQNFDPKAIMNCVSTKQTIDDYRVVELFSLLQDYVYNADLTCQSAHEKGLVITRSWTPSVTLVYDDGKQGDSLEKIVKESPQIQVSIDRLILKKNNEGNYTNQYANVSVYEWIYDKEETRYKLEPLKYWGCAYSKELVIKVCAVQEGAISDSFEPYSYDHELGFKDLPGVFIKWRSNGYQERLQYNPTKDRSVVINYTSALTQD
>CP012375.1|AOC54406.1|3619786_3620476_-|hypothetical-protein
MLSEGLDIPETSINKENPPYFTLPRQYIALGAYPVLDKWSGVHRTHRKGTRSFNHDVFSRLYIDGDRENFQLHTWEYFIAEELIGYVVSESKSSLEAFSNLQGVGCKIGKEGFAVIDEVSESIRLQRKILSAHPSTVVPMEALIQRNPCINRCDIYNLYRHEWSADQTQDEDKGLFDTERSPINGFIPFVAAYYPEKAHPLPTLDFYTDGNLQIPVALVELLQRESINV
>CP012375.1|AOC54407.1|3620614_3621508_-|hypothetical-protein
MATESKVTTGLPKTDANKPRLHFDIYAILEGSQELYLGHEVQVNVNLVEIVKLSTKDGKEIEKCYISPTKRRGVERRCLLWSPVKSGELLGDKQNCGIPKTCAEPTCPICATFGALDPGKRTLIGRVTHGGGVAIQEIYPVEKQRAMHPALLVNRNDETPTPFRREYNQPGILYPVYNHALSITDQDFSAVAYAFLDSLPRIGSGNPKGIAIAETDDRTPLLVLDRYLSPRGKRPIVSPSETDPQKAINDFLYLALYPETNFTNHIQEAHFDRWIGNEALAKLQEYSAIFVDTVLQA
>CP012375.1|AOC54408.1|3621510_3624042_-|hypothetical-protein
MSIKQLSLFENVSPEQDTKAVTTSEEISELEITILLSALTANAIAQTDSTLISALADDPRAIAIAKTFDCPKLVRQLRLSQPQKESEFIKPTFQGNQVFYREREIGEIQLVYKSPSPGELQAKLTHESTIDRFLEFLQKKYQIVSLHESNYHVQIFIPQTQQSHNIEELWIEFITKVIFSIYGDFQYQLSGLMQTFITMLKSVTLAGRGFSTLEIPIITRDQAKVLAAFYLAIFEQVKDRQEKRETEIVQLIEKIKSEELNSKDLESTEKKLKSKQEMQAKEFNKYRDYFQKVLSKLLDEQRAIYHERRNLDEQLGKTGLSKAQVSKLQKQKDKIESQIIFQEDSIEEKQRFLEESDGNPFKFIEKQKQTDLLKPIQAIAKSFNKTATEQINSTRGDIFTQCILEMYRLLENPKLETIPEPLLTINPKILAARTAGDDGKDFCYSCGVTLDAKTVRWRVARFMFERPSQRRQSSSSEDRPFICSSCSVLSFASPLKVTDDSIILRLESQDDRGVTKVKIKDYLRMLTNKEVHLSSGCYIALTSEKTITGDTASKKLGQFQYALAKVASIFPLEVIKDFKFVLQLQRTEKVLVSRQLIFIKGLIEGYDQSIIVSGKDINLKLGDAIRYVQQDSPYLADYTLLKASSISDRLLLERVREQYLQTIIQDIQGETMTIDSLWKRAKLYEDVAALTGLTYAFAQSLESTAKKLMKPEDAEREVSKLIEKVDDPVAFSYYATLGDEKKISVQARLYHNPDNYFIYEQAKKMLENKLEITNREEVDNSGKKWLVFYADDITKSYAYFANPDQVGNYAQEKEWKNLTYNLKLSLYTRFPELVRKLSSKGDK
>CP012375.1|AOC54409.1|3624129_3624294_-|hypothetical-protein
MPNLDDIYQQIERFQDQIERFQDQSELLQCQIKELRQSPVLDSEGEVRIFADLT

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Crispr_ID: CP012375_23

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP012375_23

4253732-4253861

TypeV

Consensus_repeat	Method
TCTGGTGGGTTACGGCGAATACTCAATTTTTAGTGAGAGT	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP012375_23

>merge|CP012375|23|4253732-4253861|CRISPRCasFinder
TCTGGTGGGTTACGGCGAATACTCAATTTTTAGTGAGAGTATAACTTATTTTCGCCGCACCCACCCTACAGATGATTGCCTATGTGCTGATCTGGTGGGTTACGGCGAATACTCAATTTTTAGTCAGAGT

>CP012375|23|22|4253732-4253861|CRISPRCasFinder
TCTGGTGGGTTACGGCGAATACTCAATTTTTAGTGAGAGT	ATAACTTATTTTCGCCGCACCCACCCTACAGATGATTGCCTATGTGCTGA
TCTGGTGGGTTACGGCGAATACTCAATTTTTAGTCAGAGT

Protein	Signature genes	Signature genes Name	Protein_function
CP012375.1\|AOC55008.1\|4253488_4253605_+\|hypothetical-protein	unknown	unknown	unknown
CP012375.1\|AOC55007.1\|4252970_4253399_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372936
CP012375.1\|AOC55013.1\|4259939_4261157_-\|Glycosyltransferase	unknown	unknown	gnl\|CDD\|274425
CP012375.1\|AOC55009.1\|4253900_4256222_-\|ATP-dependent-DNA-helicase-UvrD/PcrA	unknown	unknown	gnl\|CDD\|273429
CP012375.1\|AOC55004.1\|4250130_4251756_-\|Heat-shock-protein-60-family-chaperone-GroEL	unknown	unknown	gnl\|CDD\|234573
CP012375.1\|AOC55005.1\|4251802_4252114_-\|Heat-shock-protein-60-family-co-chaperone-GroES	unknown	unknown	gnl\|CDD\|178988
CP012375.1\|AOC55012.1\|4258925_4259888_-\|Glycosyltransferase	unknown	unknown	gnl\|CDD\|133030
CP012375.1\|AOC55015.1\|4262133_4263054_-\|Glycosyl-transferase,-family-2	unknown	unknown	gnl\|CDD\|366154
CP012375.1\|AOC55000.1\|4246105_4246429_+\|putative-30S-ribosomal-protein-PSRP-3	unknown	unknown	gnl\|CDD\|235062
CP012375.1\|AOC55006.1\|4252250_4252388_-\|hypothetical-protein	unknown	unknown	unknown
CP012375.1\|AOC55014.1\|4261159_4262119_-\|GDP-mannose-4,6-dehydratase	unknown	unknown	gnl\|CDD\|224014
CP012375.1\|AOC55011.1\|4258343_4258898_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|312763
CP012375.1\|AOC55002.1\|4247140_4248589_-\|ATP-synthase-beta-chain	unknown	unknown	gnl\|CDD\|214349
CP012375.1\|AOC55001.1\|4246649_4247066_-\|ATP-synthase-epsilon-chain	unknown	unknown	gnl\|CDD\|214351
CP012375.1\|AOC55017.1\|4264435_4264792_+\|Dihydroneopterin-aldolase	unknown	unknown	gnl\|CDD\|376737
CP012375.1\|AOC55018.1\|4264778_4265321_-\|FMN-reductase	unknown	unknown	gnl\|CDD\|377026
CP012375.1\|AOC55016.1\|4263319_4264303_+\|Glycosyltransferase-PglI	unknown	unknown	gnl\|CDD\|366154
CP012375.1\|AOC55010.1\|4256547_4257798_+\|S-adenosylmethionine-synthetase	unknown	unknown	gnl\|CDD\|235374
CP012375.1\|AOC54999.1\|4245579_4246002_-\|Mutator-mutT-protein-(7,8-dihydro-8-oxoguanine-triphosphatase)	unknown	unknown	gnl\|CDD\|239517
CP012375.1\|AOC55003.1\|4249151_4249310_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377877

Protein	Function_ID	Function_description	E-value
CP012375.1\|AOC55007.1\|4252970_4253399_-\|hypothetical-protein	gnl\|CDD\|372936	pfam14159, CAAD, CAAD domains of cyanobacterial aminoacyl-tRNA synthetase. This domain is present in aminoacyl-tRNA synthetases (aaRSs), enzymes that couple tRNAs to their cognate amino acids. aaRSs from cyanobacteria containing the CAAD (for cyanobacterial aminoacyl-tRNA synthetases appended domain) protein domains are localized in the thylakoid membrane. The domain bears two putative transmembrane helices and is present in glutamyl-, isoleucyl-, leucyl-, and valyl-tRNA synthetases, the latter of which has probably recruited the domain more than once during evolution.	1.43466e-40
CP012375.1\|AOC55009.1\|4253900_4256222_-\|ATP-dependent-DNA-helicase-UvrD/PcrA	gnl\|CDD\|273429	TIGR01073, ATP-dependent_DNA_helicase_PcrA, ATP-dependent DNA helicase PcrA. Designed to identify pcrA members of the uvrD/rep subfamily. [DNA metabolism, DNA replication, recombination, and repair].	0
CP012375.1\|AOC55003.1\|4249151_4249310_-\|hypothetical-protein	gnl\|CDD\|377877	pfam07589, VPEP, PEP-CTERM motif. This motif has been identified in a wide range of bacteria at their C-terminus. It has been suggested that this is a protein sorting signal. Based on phylogenetic profiling it has been suggested that the EpsH family of proteins mediate this function.	0.00320858
CP012375.1\|AOC55005.1\|4251802_4252114_-\|Heat-shock-protein-60-family-co-chaperone-GroES	gnl\|CDD\|178988	PRK00364, groES, co-chaperonin GroES; Reviewed.	3.78596e-48
CP012375.1\|AOC55012.1\|4258925_4259888_-\|Glycosyltransferase	gnl\|CDD\|133030	cd04187, DPM1_like_bac, Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.	6.68726e-92
CP012375.1\|AOC55015.1\|4262133_4263054_-\|Glycosyl-transferase,-family-2	gnl\|CDD\|366154	pfam00535, Glycos_transf_2, Glycosyl transferase family 2. Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.	3.98326e-31
CP012375.1\|AOC55000.1\|4246105_4246429_+\|putative-30S-ribosomal-protein-PSRP-3	gnl\|CDD\|235062	PRK02724, PRK02724, 30S ribosomal protein PSRP-3.	3.91121e-66
CP012375.1\|AOC55013.1\|4259939_4261157_-\|Glycosyltransferase	gnl\|CDD\|274425	TIGR03087, stp1, sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.	1.47678e-56
CP012375.1\|AOC55014.1\|4261159_4262119_-\|GDP-mannose-4,6-dehydratase	gnl\|CDD\|224014	COG1089, Gmd, GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane].	5.86429e-162
CP012375.1\|AOC55011.1\|4258343_4258898_-\|hypothetical-protein	gnl\|CDD\|312763	pfam09367, CpeS, CpeS-like protein. This family, that includes CpeS proteins, is functionally uncharacterized.	2.48545e-52
CP012375.1\|AOC55002.1\|4247140_4248589_-\|ATP-synthase-beta-chain	gnl\|CDD\|214349	CHL00060, atpB, ATP synthase CF1 beta subunit.	0
CP012375.1\|AOC55001.1\|4246649_4247066_-\|ATP-synthase-epsilon-chain	gnl\|CDD\|214351	CHL00063, atpE, ATP synthase CF1 epsilon subunit.	1.26357e-60
CP012375.1\|AOC55017.1\|4264435_4264792_+\|Dihydroneopterin-aldolase	gnl\|CDD\|376737	pfam02152, FolB, Dihydroneopterin aldolase. This enzyme EC:4.1.2.25 catalyzes the conversion of 7,8-dihydroneopterin to 6-hydroxymethyl-7,8-dihydropterin in the biosynthetic pathway of tetrahydrofolate.	6.10559e-38
CP012375.1\|AOC55018.1\|4264778_4265321_-\|FMN-reductase	gnl\|CDD\|377026	pfam03358, FMN_red, NADPH-dependent FMN reductase.	3.88413e-45
CP012375.1\|AOC55016.1\|4263319_4264303_+\|Glycosyltransferase-PglI	gnl\|CDD\|366154	pfam00535, Glycos_transf_2, Glycosyl transferase family 2. Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.	9.92131e-34
CP012375.1\|AOC55010.1\|4256547_4257798_+\|S-adenosylmethionine-synthetase	gnl\|CDD\|235374	PRK05250, PRK05250, S-adenosylmethionine synthetase; Validated.	0
CP012375.1\|AOC54999.1\|4245579_4246002_-\|Mutator-mutT-protein-(7,8-dihydro-8-oxoguanine-triphosphatase)	gnl\|CDD\|239517	cd03425, MutT_pyrophosphohydrolase, The MutT pyrophosphohydrolase is a prototypical Nudix hydrolase that catalyzes the hydrolysis of nucleoside and deoxynucleoside triphosphates (NTPs and dNTPs) by substitution at a beta-phosphorus to yield a nucleotide monophosphate (NMP) and inorganic pyrophosphate (PPi). This enzyme requires two divalent cations for activity; one coordinates the phosphoryl groups of the NTP/dNTP substrate, and the other coordinates to the enzyme. It also contains the Nudix motif, a highly conserved 23-residue block (GX5EX7REUXEEXGU, where U = I, L or V), that functions as metal binding and catalytic site. MutT pyrophosphohydrolase is important in preventing errors in DNA replication by hydrolyzing mutagenic nucleotides such as 8-oxo-dGTP (a product of oxidative damage), which can mispair with template adenine during DNA replication, to guanine nucleotides.	6.94662e-56
CP012375.1\|AOC55004.1\|4250130_4251756_-\|Heat-shock-protein-60-family-chaperone-GroEL	gnl\|CDD\|234573	PRK00013, groEL, chaperonin GroEL; Reviewed.	0

>CP012375.1|AOC55008.1|4253488_4253605_+|hypothetical-protein
MPILSDNFDSRRKVSQQLLRIKDLASQFYRQSDRNSLF
>CP012375.1|AOC55007.1|4252970_4253399_-|hypothetical-protein
MESMQPTETKNPIRTDLPGSLSKPSSSTEQIWSEYVEPVWDSVMSYLANVPDYIGSFFSGYKKPLIVLGAILASFVTVKVTLAVLDAIDDIPLLAPILQLVGIVYTGWFVWRYLLKDENRRELLAEIDALKAQVFGSHNNTL
>CP012375.1|AOC55006.1|4252250_4252388_-|hypothetical-protein
MLGTCALIMRHLAGLVLLQSDFLAGILFLRKSLTPPTNFLPQTLA
>CP012375.1|AOC55005.1|4251802_4252114_-|Heat-shock-protein-60-family-co-chaperone-GroES
MAAVSINVTTVKPLGDRVFVKVSPSEEKTAGGIFLPDAAKEKPQIGEVVAVGPGKRNDDGSRTPVEVGVGDKVLYSKYAGTDIKLGGEEFVLLSEKDILAAVS
>CP012375.1|AOC55004.1|4250130_4251756_-|Heat-shock-protein-60-family-chaperone-GroEL
MAKSIIYNEDARRALEKGMDLLAEAVAVTLGPKGRNVVLEKKFGAPQIVNDGITIAKEIELEDHIENTGVALIRQAASKTNDVAGDGTTTATVLAHAIVKEGLRNVAAGANPISLKKGIDKAADFLVSQIAKHSKPVEDSKAIAQVGAISAGNDDEVGQMIASAMDKVGKEGVISLEEGKSMTTELEITEGMRFDKGYISPYFVTDTERMECVFEDPAILITDKKIGLVQDLVPILEQVARQGKPLVIIAEDIEKEALATLVVNRLRGVLNVTAVKAPGFGDRRKAMLEDIAVLTGGQVISEDAGLKLETTKIDSLGTARRITMNKDTTTIVAEGNDVAVKTRCEQIRRQIEETDSSYDKEKLQERLAKLAGGVAVIKVGAATETEMKDRKLRLEDAINATKAAVEEGIVPGGGTTLAHLAPQLETWAKETLHHEELTGALIVSRAIAAPLKRIAENAGQNGAVIAERVKEKPFNVGYNAATGEFSDMFEAGIVDPAKVTRSALQNAASIAGMVLTTECIVVDKPEKEKSAPPAGGGDFDY
>CP012375.1|AOC55003.1|4249151_4249310_-|hypothetical-protein
MSFNNSTTSNSFQINATEITGPVASTPEPSVIAALSLFGLGLLGVKGRRNEG
>CP012375.1|AOC55002.1|4247140_4248589_-|ATP-synthase-beta-chain
MVATTETNVGKIVQIIGPVIDAEFPSGNLPRIYNALTVKGTNSAGQNLSVTCEVQQLLGDNQVRAVAMSTTDGLVRGMDIVDTGAAISVPVGKCTLGRIFNVLGEPVDEKGPVNVTETSPIHRPAPKLVDLEVTPTVFETGIKVIDLLTPYRQGGKIGLFGGAGVGKTVIMMELINNIAIQHGGVSVFGGVGERTREGNDLYNEMIESKVINADNPEESKIALVYGQMNEPPGARMRVGLSALTMAEYFRDVNKQDVLLFVDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTDVGDLQERITSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDGTTVLSRGLASKGIYPAVDPLGSTSTMLQADIVGDEHYGTARAVQSTLQRYKELQDIIAILGLDELSEEDRLTVDRARKIERFLSQPFFVAEVFTGSPGKYVTLADTIKGFQMILKGELDSLPEQAFYMVGNIDEAIAKGEKLKKG
>CP012375.1|AOC55001.1|4246649_4247066_-|ATP-synthase-epsilon-chain
MSITVRVITPDRIVWDNVAEEVILPSSTGQLGILSGHAPLLTALNIGVMRIRPGKDWENIAVLGGFAEVENNEIKVLVNGAELGSKIDKEKARAEYEKAQTRLDEVSKGDDRRKTIQAQQSWRKARARYQAAGGLVSV
>CP012375.1|AOC55000.1|4246105_4246429_+|putative-30S-ribosomal-protein-PSRP-3
MTVSSESKFILKVLWLDQNVAIAVDQVVGKGTSPLTAYFFWPRNDAWQQLQEELEAKHWIDESDRVDVLNKATEVINFWQELRNQGRQIPMADAQLKFPEVVFSGSN
>CP012375.1|AOC54999.1|4245579_4246002_-|Mutator-mutT-protein-(7,8-dihydro-8-oxoguanine-triphosphatase)
MIPETDSLASKQIGVAVIRDDRDLILIDRRLAKGLLGGFWEFPGGKIEGNETVQECIKREILEEIGIEIAVDSHLITIDHTYSHFRVNLQVYNCRYLSGEARAIECEEIRWVTIEELDHFTFPAANQEIIRALKDMVNSK
>CP012375.1|AOC55009.1|4253900_4256222_-|ATP-dependent-DNA-helicase-UvrD/PcrA
MTVTADYLEQLNPSQRLAVEHFCGPLLVVAGAGSGKTSALTYRIAHLIRHHGVDPENILAVTFTNKAAREMKTRIEKTFAQQKAQEKYGQRLELLEEYEQKKLFSQVYRNYTKKLWIGTFHSLCGRILRYDINKYQDEYGHSWQRNFSIMDESDAQSLVKNIVTKQMNLDDKKFDARNLRYAISNAKNLGLTPRDYARENPHFRGKVISEVYQAYQMQLAQNNALDFDDLILVPVRLFQQNESILGYWHTQFKHILVDEYQDTNQIQYELIRLLSTNGETKKSEWNWTDRSIFVVGDADQSIYSFRMADFTILLNFQADFGDGLPDDDTRTMVKLQENYRSRENILQAANKLIENNSQRIDKVLVPTREGGESIYVFKARDEQEEASFVIDKIREFTQENPELNWGSFAILYRINAQSRPFEDTLIRNNIPYNIVGGFKFYDRQEIKDAIAYLRVIANPADTVSLLRIINTPRRGIGKTTIDNLLKAAQELGVPLWEIISDETSVNTLAGRATKSINKLAKIIQNLQEKITDLSASEILDKIMEDSGYIDELKQQGTEEADTRIENIQELYSAVVQFQEENEETNLQEFLANASLASDLDNLQEGQEKVSLMTLHSAKGLEFPIVFLVGLEQGIFPHNRSLNDPIALEEERRLCYVGVTRAKEQLFLTYAKERYVWGNKETKVASQFLQELPPELLTSNLKPKKTPKVVPIQTTASNQRKWQVGDRVLHSTFGEGEVTHILGTGKKMNLAVKFSGLGQKIIDPRTAPMQLIHE
>CP012375.1|AOC55010.1|4256547_4257798_+|S-adenosylmethionine-synthetase
MSKRYLFTSESVTEGHPDKICDQISDTILDALLSQDDHSRVAAEVVVNTGLVLITGEITSKAQVHFVNLVRSKIAEIGYINADNGFSSNSCTVLVALDEQSPDISQGVTAAQENRELLSNDELDKIGAGDQGIVFGFACNETPEFMPLPISLAHRIARRLAAVRKTGELSYLRPDGKTQVSVIYEDGRPVGIDTILVSTQHDATIGDITDNDLVQQKIKSDLWEAVVQPVFSDLEIKPDANTRYLVNPTGKFVIGGPQGDAGLTGRKIIVDTYGGYSRHGGGAFSGKDPTKVDRSAAYACRYVAKNIVAAGLADKCEIQVGYAIGVARPVSVFVETFGTGKVADDVILDLINKYFELRPAGIIQTFNLRGLPSERGDRFYQDVAAYGHFGRNDLDLPWEKTDKAAILKEALTSAVV
>CP012375.1|AOC55011.1|4258343_4258898_-|hypothetical-protein
MNTEIFQQFFAYCVGSWQTERTYHYLAAQEVERSRTEFLIQPLTREIKQKVLTDNNYPDIADLESIPGFNLGFYTISEKGEEVRQNLNLLFVVKAENNGYLEGDYLRDRAYEEARPIISAFRFDSTTRELLMTTNYTRSVSVDSITLINPDLRIRKIINYQRPQQGEPLEKVLLVGFGVECKVS
>CP012375.1|AOC55012.1|4258925_4259888_-|Glycosyltransferase
MKISVVVPLYNEEENIDVLFRRLLAVLETINTSYEVVCVNDGSRDNTLKNLVEYHQRYPQIKVVNLSRNLGKDIAMSAGIDYSQGMAVIPIDTDLQDPPELIAEMIEKWQQGYDVVYASRRVRIGESWLKRFTAEGFYQVINKLSRVPIPPNTVDFRLIDRRVVESIKKMPERQRFMKGIFAWVGYKQTSILFDREPRYQGQTKWNYWKLWNFAIDGITSFSFLPLKVWTYVGFIIALVSLVYASFLMLRTIILGIDVPGYASLMVTVLFLGGIQLLTLGIIGEYIGRVYEEVKGRPLYLVRDCYGFENREQVTDKITQN
>CP012375.1|AOC55013.1|4259939_4261157_-|Glycosyltransferase
MNILMISSTFPYPPSKGGTQGRTFNLLKYLSKNHDITLIVQRTADVSDEEVEKLGKFVSELVVFPRPRDAKTGIISKLHRLAQFLQTGTPPNVLFGYSQEMQNWIDRAVKSQKFPVITSEHSVNEIYIRPQWKQQIRTVIDVHSSLYQTGKSQLEIGVSSQELRDSLYLPLLRRYEQKTVQKFSKIVVTTDDDQKQMEEFAPNGEIYLIPNAVDLDLFPYRTEDPSGHNLVFIGGLDYWVNIDAACFLAREILPRIQITYPDTTLTLVGANPSLEVQELTKLKGVIVTGRVPSMTTYLHQATVAVIPLRTGFGMKFKTLESMAAGVPVVASDRGLEGLTVEGNNVPLAALRANSIEEYCTAISSLFESAELREKLSRNARKLIEDNYTWQQAATKYEQVLVADIC
>CP012375.1|AOC55014.1|4261159_4262119_-|GDP-mannose-4,6-dehydratase
MSKKALICGISGQDGAYLAELLLKAGYTVCGTSRDAQMSSFSNLKRLGIKEQVKLESMALNDFRSVLQVLIKIQPDEVYNLAGQSSVGLSFEQPVETLESIATGTLNLLEAIRFTGAKIKLYNAGSSECFGDIGDNSADENTPFRPRSPYAVAKSAAFWEVANYREAYGIFACSGILFNHESPLRPERFVTQKIIAAVAKIARGSPDTLHLGNMDIQRDWGWAPEYVEAMYLMLQQEQPDDYVIATGESSKLEDFVATAFATVGLNWQDHVISDRSLLRPTDLAISRGNPHKAKEKLGWQARYKMTDIVRMMVENRLEE
>CP012375.1|AOC55015.1|4262133_4263054_-|Glycosyl-transferase,-family-2
MAPKIAGIICTYNRDHYLAAAIDSLLAQTCPDCEILVVDNASTDKTRQVVESRLGDGRLKYVYEPILGLSTARNRGAKETRAPILAYLDDDAIASPQWLQILLNAYENNQKLAVAGGKVTLIWPQGYSQPNWLSDQLAGGLGAFDLGDNVVYISQADLTPRGVNYSIRRDFWEKIGGFDPNLGRIGKKLLSNEELYTTELALAQGWQVGYFPAALVEHNVAPERINRQWFMRRSWWQGISEHYREEVAGKTGLAQFGRGGERLVRGLVKSVKFINDPAKSFDNLLYAYGQIGYLSEAAKAMLNPQK
>CP012375.1|AOC55016.1|4263319_4264303_+|Glycosyltransferase-PglI
MPKVTVCIPTYNRADYLSYSINSVLGQTYEDFELIVCDDGSSDRTPEVVTAFQDSRIIYLRHPQNLGRSLNMRSGFTAARGEYFIKFDDDDGLTPEFLAKTVPILDQEKNVDFVCTDHWIIDKFGQKVTAATQENSAKWGKDRLQKGIIPDLERQTFSYQSLQVGSTLFRYQSLADVDYMRPQADGCEDFDLLVRLALVGKQAYFLPELLMEYRFHGGQTSLKQAVHFLQAKLFCTESYQFNDLKLEEERVKKAAFLQESLGIKLIEKGETEAGRFLIEKASKLSGKSRRARLGLLLSYLPLNLRQLAFQGFRQLRPKDYAEQVRAV
>CP012375.1|AOC55017.1|4264435_4264792_+|Dihydroneopterin-aldolase
MDTIHVTGIRAYGYTGYLAEEQVLGQWFEVDLSLEVDISIAGKSDAIEDTLDYRQAIEIVKHQIETSKFALVEKLATVIAEDILKLEGVRQVRVQLSKPAAPIPNFTGKITIDITRSR
>CP012375.1|AOC55018.1|4264778_4265321_-|FMN-reductase
MIKIVGINGSLRSGSYSAMALEVAISRLGALGVETEIIDLRKLSLPFCNGGDDYSDYPDVAKMQQTVKSAAGLILATPEYHGSVSGVMKNALDLMSFEELSGKVAGLISVLGGQSNSNALNDLRIILRWVHAWVIPEQISLGQAWKVFNEEGKILDEKLSQRFDAFAQSLVDNTRKLNEI

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Crispr_ID: CP012375_25

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP012375_25

4284558-4284693

TypeV

Consensus_repeat	Method
TATGGTATTAGCTAAAGTGGTTTTCGGTGCAGCCCCGACCAC	CRISPRCasFinder

1 spacers

RT,cas14j

The CRISPR arrays of CP012375_25

>merge|CP012375|25|4284558-4284693|CRISPRCasFinder
TATGGTATTAGCTAAAGTGGTTTTCGGTGCAGCCCCGACCACTAGATCAACTTTTTGACCCCTTTTGAGGATCATCAGGTTTCAGGTGTTTATCTATGGTATTAGCTAAAGTGGTTTTCGGTACAGCCCCGACCAC

>CP012375|25|24|4284558-4284693|CRISPRCasFinder
TATGGTATTAGCTAAAGTGGTTTTCGGTGCAGCCCCGACCAC	TAGATCAACTTTTTGACCCCTTTTGAGGATCATCAGGTTTCAGGTGTTTATC
TATGGTATTAGCTAAAGTGGTTTTCGGTACAGCCCCGACCAC

Protein	Signature genes	Signature genes Name	Protein_function
CP012375.1\|AOC55044.1\|4289548_4290421_+\|IS891/IS1136/IS1341-transposase	cas14j	-	gnl\|CDD\|223747
CP012375.1\|AOC55045.1\|4290488_4291103_+\|Acetate-kinase	unknown	unknown	gnl\|CDD\|234680
CP012375.1\|AOC55036.1\|4280324_4281740_+\|Cobalamin-biosynthesis-protein-CobG	unknown	unknown	gnl\|CDD\|236573
CP012375.1\|AOC55032.1\|4276781_4277216_+\|Protein-of-unknown-function-DUF559	unknown	unknown	gnl\|CDD\|238509
CP012375.1\|AOC55031.1\|4274135_4276496_+\|serine/threonine-kinase	unknown	unknown	gnl\|CDD\|319862
CP012375.1\|AOC55033.1\|4277467_4278736_-\|Cobalt-precorrin-6y-C5-methyltransferase	unknown	unknown	gnl\|CDD\|225151
CP012375.1\|AOC55035.1\|4279504_4280140_+\|hypothetical-protein	unknown	unknown	unknown
CP012375.1\|AOC55038.1\|4282372_4283077_+\|Cobalt-precorrin-2-C20-methyltransferase	unknown	unknown	gnl\|CDD\|180341
CP012375.1\|AOC55039.1\|4283388_4284537_+\|Rossmann-fold-nucleotide-binding-protein-Smf	unknown	unknown	gnl\|CDD\|223829
CP012375.1\|AOC55043.1\|4287300_4289061_+\|Retron-type-RNA-directed-DNA-polymerase	RT	pfam00078_RT_CAS-I:CAS-III	gnl\|CDD\|275209
CP012375.1\|AOC55034.1\|4278799_4279447_+\|hypothetical-protein	unknown	unknown	unknown
CP012375.1\|AOC55047.1\|4291772_4292429_-\|RNA-polymerase-sigma-70-factor	unknown	unknown	gnl\|CDD\|236608
CP012375.1\|AOC55041.1\|4285148_4285268_-\|hypothetical-protein	unknown	unknown	unknown
CP012375.1\|AOC55042.1\|4285579_4286569_-\|Mobile-element-protein	unknown	unknown	gnl\|CDD\|372577
CP012375.1\|AOC55046.1\|4291107_4291659_-\|hypothetical-protein	unknown	unknown	unknown
CP012375.1\|AOC55030.1\|4273758_4273875_-\|Protein-of-unknown-function-DUF820	unknown	unknown	gnl\|CDD\|235730
CP012375.1\|AOC55037.1\|4281749_4282376_+\|Cobalt-precorrin-8x-methylmutase	unknown	unknown	gnl\|CDD\|181352

Protein	Function_ID	Function_description	E-value
CP012375.1\|AOC55044.1\|4289548_4290421_+\|IS891/IS1136/IS1341-transposase	gnl\|CDD\|223747	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	2.83579e-52
CP012375.1\|AOC55045.1\|4290488_4291103_+\|Acetate-kinase	gnl\|CDD\|234680	PRK00180, PRK00180, acetate kinase A/propionate kinase 2; Reviewed.	2.96194e-110
CP012375.1\|AOC55036.1\|4280324_4281740_+\|Cobalamin-biosynthesis-protein-CobG	gnl\|CDD\|236573	PRK09567, nirA, NirA family protein.	7.01329e-108
CP012375.1\|AOC55032.1\|4276781_4277216_+\|Protein-of-unknown-function-DUF559	gnl\|CDD\|238509	cd01038, Endonuclease_DUF559, Domain of unknown function, appears to be related to a diverse group of endonucleases.	3.54072e-43
CP012375.1\|AOC55031.1\|4274135_4276496_+\|serine/threonine-kinase	gnl\|CDD\|319862	cd16383, GUN4, porphyrin-binding protein domain GUN4. GUN4 is a porphyrin-binding protein involved in chlorophyll biosynthesis regulation and intracellular signaling, found in aerobic photosynthetic organisms. It has been implicated in retrograde signalling between the chloroplast and nucleus. GUN4 can bind protoporphyrin IX (PIX) and magnesium protoporphyrin IX (MgPIX), substrate and product of the Mg-chelatase, as well as heme and cobalt protoporphyrin IX (CoPIX). It may play a role in protecting plants from reactive oxygen species (ROS)-mediated damage.	2.80274e-59
CP012375.1\|AOC55042.1\|4285579_4286569_-\|Mobile-element-protein	gnl\|CDD\|372577	pfam13359, DDE_Tnp_4, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	4.7635e-33
CP012375.1\|AOC55038.1\|4282372_4283077_+\|Cobalt-precorrin-2-C20-methyltransferase	gnl\|CDD\|180341	PRK05990, PRK05990, precorrin-2 C(20)-methyltransferase; Reviewed.	2.51971e-94
CP012375.1\|AOC55039.1\|4283388_4284537_+\|Rossmann-fold-nucleotide-binding-protein-Smf	gnl\|CDD\|223829	COG0758, Smf, Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake [DNA replication, recombination, and repair / Intracellular trafficking and secretion].	2.48968e-117
CP012375.1\|AOC55043.1\|4287300_4289061_+\|Retron-type-RNA-directed-DNA-polymerase	gnl\|CDD\|275209	TIGR04416, hypothetical_protein, group II intron reverse transcriptase/maturase. Members of this protein family are multifunctional proteins encoded in most examples of bacterial group II introns. These group II introns are mobile selfish genetic elements, often with multiple highly identical copies per genome. Member proteins have an N-terminal reverse transcriptase (RNA-directed DNA polymerase) domain (pfam00078) followed by an RNA-binding maturase domain (pfam08388). Some members of this family may have an additional C-terminal DNA endonuclease domain that this model does not cover. A region of the group II intron ribozyme structure should be detectable nearby on the genome by Rfam model RF00029. [Mobile and extrachromosomal element functions, Other].	3.59644e-123
CP012375.1\|AOC55047.1\|4291772_4292429_-\|RNA-polymerase-sigma-70-factor	gnl\|CDD\|236608	PRK09652, PRK09652, RNA polymerase sigma factor RpoE; Provisional.	1.33194e-83
CP012375.1\|AOC55033.1\|4277467_4278736_-\|Cobalt-precorrin-6y-C5-methyltransferase	gnl\|CDD\|225151	COG2242, CobL, Precorrin-6B methylase 2 [Coenzyme metabolism].	1.80645e-73
CP012375.1\|AOC55030.1\|4273758_4273875_-\|Protein-of-unknown-function-DUF820	gnl\|CDD\|235730	PRK06187, PRK06187, long-chain-fatty-acid--CoA ligase; Validated.	0.000315328
CP012375.1\|AOC55037.1\|4281749_4282376_+\|Cobalt-precorrin-8x-methylmutase	gnl\|CDD\|181352	PRK08285, cobH, precorrin-8X methylmutase; Reviewed.	3.66558e-128

>CP012375.1|AOC55039.1|4283388_4284537_+|Rossmann-fold-nucleotide-binding-protein-Smf
MTDDRVYWLAWSSIAGVGPISLKRLYQHFGSVAVAWNASDSAIAEGAGFGKKLMVAVREGRSQIDPEALFAEHIQKNPLFWTPSDPEYPRFLREIPSPPPLLYYQGKVNLEENQGNIPTVAIVGTRNPTDHGRRWARRLSTLLAQQGFTIVSGMAEGIDGEAHQSCLKAGGRTIAVLGTGVDVVYPSRHRQLHADIQKQGLVISEHPAATQPNKAHFPSRNRIIAGLSRATIVIEAPERSGSLITASYANEFGGDIYALPNSPDIAAARGCLQLIHQGAEIIVSEEKLLEMLGAIPTTNQSAPLNLSPSLPLETSPAVNAAPPVNLEPRLAQVYQLFDRDALLFDIIVQKMQIPTSEVAGILLELELIGLVTQLPGMRYQKT
>CP012375.1|AOC55038.1|4282372_4283077_+|Cobalt-precorrin-2-C20-methyltransferase
MNKLGKLYGLGIGPGDPELLTLKAHRILTTVPVIAYPTLESGKVLARAIVSDFIRPEQIEIPMPLPFSVERSSQPHYDIAAENIAEHLNLGRDVAVLCVGDPMLYGTFMYIFNRLCDRFSIEVVPGISSVMASAAMLGVPITYRNDVFSIMPATLKAEILRDRLAFIDAAAIIKLGRHFAKVRDILEELGLLERALYIERATLPNQQIIPITEVDPEAATYWSLILIPSKTKPQ
>CP012375.1|AOC55037.1|4281749_4282376_+|Cobalt-precorrin-8x-methylmutase
MEYIKNGEEIYRKSFAIIRAETNWENLPDDLAHVAVRLIHSCGMTDITEDLEASPDAVKIGRNALAGGAAILCDSQMVANGITKARLPKNNPIICTLNHPEVTELARQINNTRSAAALELWRRHLAGAVVAIGNAPTALFRLLELLDQNVDKPALILGFPVGFVGAAESKIELATNSRGVPFITLHGRRGGSAIAAAAVNALAKENEL
>CP012375.1|AOC55036.1|4280324_4281740_+|Cobalamin-biosynthesis-protein-CobG
MNWLVEANACPGLFYGTAAQDGFLIRLRTPGGWLNSPQGKAIATWLEQWQTTIQVTNRANLQIRGLQKSPSLEEFQTLQKLGLAAHNPSIDHLRNIMSSPTAGIDCQESIDTRPLVQELDNFIQNYPSIAQLSPKFSIGIDGGGAVGIGTGSTMAWQHRYNEIQLSAIVLNNPKNLTSILCFRLALGGDKQLYDTDLLIEPENCLAVVKALVTVYIDYVQQNPNIKGKKPRMKHLLKDWGLTKYLEQVNYQLHRTSTGIIQGQEYQQAAHSTQPYFHLGIHPQKQPGLSYIGLSLRLGQLTANQLWGLAALSETFGSGQLRLTPWQTVILPDIPDEKVSELLPKLASLGLSASPGWDAGIVACSGKPGCAAAATATQIHASLLADYLKEHLTCNSPVNIHLTGCAKSCAQPGPAEITLLGTTIEENGQILEAYQVYMGDSQKFLETPIFEGEFTKIPPLIAQILSSQKSKI
>CP012375.1|AOC55035.1|4279504_4280140_+|hypothetical-protein
MTTTADDVWKLLAELVEAQKETERCFQETERRFQETERILKEQSLETERILKEQSLKTDRQITRLSKEIGNLGGKWGRFVENMVAPACETLFLNRQIPVHQVSQRVRKRLDGKTLEIDVLVTNENHVLVVEVKSSLSVDDVKELIKNLTEFRQFFPEYNQKQLYGAVAGIEIEEGADKYAYRQGLFVLAQRGENVAILNDTEFQPKTWYDP
>CP012375.1|AOC55034.1|4278799_4279447_+|hypothetical-protein
MTTTADDVWKLLAELVEAQKETERCFQETERRFQETERVLKEQSLKTERRFQETERILKEQSLKTDRQITRVSQEIGNLGGKWGRFVENMVAPACETLFLNRDIPVHQVSQRVRKRLDGKTLEIDVLVTNENHVLVVEVKSSLSVDDVKELIKNLTEFRQFFPEYNQKQLYGAVAGIEIEEGADKYAYRQGLFVLAQRGENVAILNDTEFQPKTW
>CP012375.1|AOC55033.1|4277467_4278736_-|Cobalt-precorrin-6y-C5-methyltransferase
MADNEIVAIFFNMADRNCKSKWLSIIGIGEDGLEGLSSVGRSLLSLASVIVGGERHLAMLPPEDQRQKLLWTSPIQDSVNEIIRRRGQSVCVLASGDPMCYGIGVTLTRQIPLEEMTIIPSPSAFSLACSRLGWSLSEVETLSLCGRPPACLNGVLYPGAKLLVLSADAQTPALAARLLREGGFGESSITVLEHLGGTRERHIQGIANDWQFTDLADLNVIAISCISSHPPTLAPRLPGLPDSAYHHDGQLTKREVRAITLSRLAPLPGQLLWDVGAGCGSIAIEWLRSDRRCQGIAIEHHPTRLQYIADNAAALGTLHLQIVAGIAPSALEDLPQPDAIFIGGGITTPHLLETCWLALRPGGRLVANTVTIESELVLLQWHSKLGGELLRIGIEKAEPVGKFLGWKAMAPVTQWTVLKPRL
>CP012375.1|AOC55032.1|4276781_4277216_+|Protein-of-unknown-function-DUF559
MQLTNHHHLPYNPKLVERAKELRKNMTKAERKLWYEYLKNFQYRVHRQRPIDQFIVDFYCPELKLVIEIDGDIHNREDAQNYDLERTQILSGYGLTVIRFTNQEVLSNFEGVCGVIGSLIPPTPLDKGGFDPSLLRGFDPPNPP
>CP012375.1|AOC55031.1|4274135_4276496_+|serine/threonine-kinase
MDDKTTKPEASESEEKKESDFDQEKEQAQVWTGKITAFVAHQLRTSAPSLPIIGGSITGILTWLSQHDTVKAIIVGGVTFIVTGFFTYGSAWSQGFLEIARTKGKNHGKGSALSFFVWLDKGLEKIRWQLANPDGKYLIKLRDSDCRYDDIEGIEDAIFGFSTPELEEIFINLDLSQLELRSEEESKGTGDDIWDLLRRAKKRTNLRLLILAPGGRGKTTLLRHLAYNYALKQPKQNAPFLIPVFLRLRRWQEVITTTEGLDLPTLIERHLKQDISQELDLPQHWAKSHLTRQRMLVMFDGFDEVKPEYAEKISQWIGKQWHDFRQNYFILTSRPKGYQAFSSEHKPRQKVFINEFTDKNIHDFVYKWYFWQEQETRVSRSLKAKQEAADNKAKDLINQLFALDDSGESSTLLALARNPLNLNMIVQLHRANFGSEQKLPQQRVDLFRRIFDLQLITRPQARGIDMILDNNEENHRQRVLQQLALKMGNTTTIEYSELLSSIQNFIQELGYPESTSAKDFVERLIHVSELILKKDEYYEFAHNLFQSYLIALEIKRLKQENLLWENWEQNLWYETCIMYATLLTNPTDFIVYFYNQSNPKAQGLAERCYRELPVKKRRGLEFLEQRRQTSLFTQLETYLKNGQWREADEETARLMLLIAKREDEGWLDEESAENFPCEELRTIDKLWVDNSGSKFGFSVQKKVWLDCGGVPGEYDYDVYKKFADEVGWRRSGNWLSYDELTFSLEGSQHAYLPSPWWRVVGRTPGGGLVAACGGGYLFSRAATCNL
>CP012375.1|AOC55030.1|4273758_4273875_-|Protein-of-unknown-function-DUF820
MLLFYPDGQAFTSYNQEKQRAERLANKLRELGINPDEI
>CP012375.1|AOC55041.1|4285148_4285268_-|hypothetical-protein
MTFGVFLQENFIWLPSPMLDSGNITKLYQKKVKIEPLGL
>CP012375.1|AOC55042.1|4285579_4286569_-|Mobile-element-protein
MKNYTWEYIQKYPKQTKRLLGIDYQQLEQLMALGKLIHRKNQSEIEKTKIRINQPGSGTPPKLSEEEQIVLMLVYLRHHLSFQILGLIFQVSESTAHNIFTYWQKLFEGELPPSLLEQIKKCQEEEIIIEQLRDYELIVDSAEQPVERPTDYQEQKIYYSGKQKRHTLKSQFIVLPKAEDIVDVVIGQPGPTSDIKICRQTLSKFDSQQTFIGDKAYLGENQIRTPDKKPKNGELTENQIKENKVLSSRRIFVEHLIRVVKVFKVVQERFRLNKSRYKSVLLTVCGLVRLRISALILEVIEGEQSGEVIDVIISHSFPSKLDFVSSNPD
>CP012375.1|AOC55043.1|4287300_4289061_+|Retron-type-RNA-directed-DNA-polymerase
MVLSSNEKVMNTATKPMYEWKDINWRKAERCVFKLSKRIFKASQRGDVKLVHKLQRLLLKSWYAKLIAVRRVSQDNQGKKTAGVDGIKSLTPKQRMALVNNLKPGNKSKPTRRVWIPKPNTDEKRPLGIPTMYERALQALVKLALEPEWEAKFEPNSYGFRPARSAHDAIGAIYISINKKPKYVLDADISKCFDKINHQKLLTKLQTYPKLRQQIKAWLKSGVMDGKNLFPTNEGTPQGGVISPLLANIALHGMEERVKQYAKTLKGNKSKNEQALTLIRYADDFVILHEDLKVIKECQEIIKQWLAEMGLELKPSKTRISHTLETYDDYVGFDFLGFNIRQYQVGKHHGAKSSKGVKLGFKTLIKPSAEKVKSHLKKLGEVVNSQKSSPQDALIKRLNPIIRGWSNYYSSVVSSKTFTDCDYYFFEKLKRWAYRRHPMKNKTWIMRKYWHTEGKDNWVFSTRGGKNPFKLARHLDTKIVRYVKVKGDKSPYDGDLIYWSSRMGKHPEMPPEKAILLKRQQGRCAYCGLYFQDGDILETDHIIPKSKGGKNNRDNKQLLHRHCHDSKTALDKTGTHDKEPLERGAV
>CP012375.1|AOC55044.1|4289548_4290421_+|IS891/IS1136/IS1341-transposase
MLLRYLPKIGEVHCQVSRQPEGDLKSVTVSVNPSGEYFASCLYDDGQDLPQKLTEGKTIGIDVGLTHFAITSDGTKHGNPQYYRKYEQRLARRQKKLSRKQKGSNNRNKARVKVAKVHSKIVRCREDFLHKLSRKLVDENQVIVIENLAVRNMIKNQNLAKSISDAGWGQFCTMLKYKAEWEGKIYLEVNRFFPSSKTCSNCLNRVDSLSLDIRSWQCPKCGETHDRDINAAKNIRDEGLRILAVGHTATASGGRVRPSKGTAFARHLPVNEESLASVLRGVSTHSLPMD
>CP012375.1|AOC55045.1|4290488_4291103_+|Acetate-kinase
MLGKPLESLKMVICHLGNGASLSAVKGGKSIDTTMGFTPLEGLMMGTRSGTINPVILIYLEREYQYNPDILKILLHKESGLKEISGISGDMRAITTAMAEGNQRAKLAFEMYIHRLKSLIGSMIASLEGLDVLVFTAGIGENSALVREKASQGWSFLGLELDLAKNAAHPRDEDIATDTSKVRVMVIATAEDSAIARECWHLSP
>CP012375.1|AOC55046.1|4291107_4291659_-|hypothetical-protein
MNNYQPEDVQWIKSLLRHDEGDSNPATEDILFLDEDNEEAHRFDLISAYIDNEVTVEERKLVQHWLDHDAAAKKLYRQLLGLQTNLKQIPVPVAMAGDRLAEQVFRKVDGQRRRQYYVYGGAIFTAMAIAVSSYFISGRNDPLSQMASGPGSISQEGDHLMIALNHPIMEIPTTEQPKENGQR
>CP012375.1|AOC55047.1|4291772_4292429_-|RNA-polymerase-sigma-70-factor
MSQSIPASWSLEAKKSQNPLSPDKLSNYDLIARCQEGCQPDRAAFAELLRRYQAHVDKLLYHLAPDWQDRADLAQEVWIRVYRNINRLHEPLKFRGWLSRIATNLFYDELRKRKRVNHPISLDAPRRVEDGEIDWDIESDYPSPDEHLTTHEFYDQLQAAIADLPEAFRTTIILREIEGMAYEEIAEITGVSLGTVKSRIARARAKLQSVLQPYFTEG

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
CP012375_12	12.1\|2268362\|47\|CP012375\|CRISPRCasFinder	2268362-2268408	47	CP012375.1	310966-311012	1	0.979

1. spacer 12.1|2268362|47|CP012375|CRISPRCasFinder matches to position: 310966-311012, mismatch: 1, identity: 0.979

taaacagtaaacagtaatcagtgagacactgttgatgggagtttttt	CRISPR spacer
taaacagtaaacagtaatcagtgagacactgttgatggaagtttttt	Protospacer
**************************************.********

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP012375_18	18.1\|3543054\|48\|CP012375\|CRISPRCasFinder	3543054-3543101	48	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	60561-60608	1	0.979
CP012375_20	20.3\|3602399\|36\|CP012375\|PILER-CR,CRISPRCasFinder,CRT	3602399-3602434	36	NC_001597	Microcystis aeruginosa plasmid pMA2 DNA, complete sequence	612-647	1	0.972
CP012375_20	20.27\|3604119\|35\|CP012375\|PILER-CR,CRISPRCasFinder,CRT	3604119-3604153	35	NZ_CP026286	Microcystis aeruginosa NIES-2549 plasmid p1, complete sequence	5231-5265	1	0.971
CP012375_20	20.47\|3605559\|34\|CP012375\|PILER-CR,CRISPRCasFinder,CRT	3605559-3605592	34	NC_001597	Microcystis aeruginosa plasmid pMA2 DNA, complete sequence	614-647	1	0.971
CP012375_22	22.10\|3612270\|34\|CP012375\|PILER-CR,CRISPRCasFinder,CRT	3612270-3612303	34	LC425515	Uncultured phage DNA, contig: NODE375	16260-16293	1	0.971
CP012375_22	22.23\|3613209\|35\|CP012375\|PILER-CR,CRISPRCasFinder,CRT	3613209-3613243	35	LC425515	Uncultured phage DNA, contig: NODE375	17435-17469	1	0.971
CP012375_11	11.2\|2091687\|22\|CP012375\|CRISPRCasFinder	2091687-2091708	22	NC_014533	Gloeothece verrucosa PCC 7822 plasmid Cy782201, complete sequence	575151-575172	2	0.909
CP012375_22	22.8\|3612128\|34\|CP012375\|PILER-CR,CRISPRCasFinder,CRT	3612128-3612161	34	LC425515	Uncultured phage DNA, contig: NODE375	16292-16325	2	0.941
CP012375_20	20.4\|3602472\|34\|CP012375\|PILER-CR,CRISPRCasFinder,CRT	3602472-3602505	34	NC_001597	Microcystis aeruginosa plasmid pMA2 DNA, complete sequence	3851-3884	3	0.912
CP012375_20	20.5\|3602543\|35\|CP012375\|PILER-CR,CRISPRCasFinder,CRT	3602543-3602577	35	LC425518	Uncultured phage DNA, contig: NODE577	10228-10262	3	0.914
CP012375_20	20.32\|3604480\|34\|CP012375\|PILER-CR,CRISPRCasFinder,CRT	3604480-3604513	34	NZ_CP026286	Microcystis aeruginosa NIES-2549 plasmid p1, complete sequence	4896-4929	3	0.912
CP012375_20	20.60\|3606488\|33\|CP012375\|PILER-CR,CRISPRCasFinder,CRT	3606488-3606520	33	NZ_CP026286	Microcystis aeruginosa NIES-2549 plasmid p1, complete sequence	1301-1333	3	0.909
CP012375_1	1.1\|455466\|28\|CP012375\|CRISPRCasFinder	455466-455493	28	MG592600	Vibrio phage 1.236.O._10N.261.52.C4, partial genome	19899-19926	6	0.786
CP012375_15	15.1\|2929015\|37\|CP012375\|CRISPRCasFinder	2929015-2929051	37	NZ_CP043057	Dolichospermum sp. UHCC 0315A plasmid pUHCC0315a, complete sequence	11932-11968	6	0.838
CP012375_20	20.50\|3605772\|34\|CP012375\|PILER-CR,CRISPRCasFinder,CRT	3605772-3605805	34	KM359505	Prochlorococcus phage P-TIM68, complete genome	142848-142881	6	0.824
CP012375_20	20.58\|3606345\|34\|CP012375\|PILER-CR,CRISPRCasFinder,CRT	3606345-3606378	34	NZ_AP019802	Thermus thermophilus strain HC11 plasmid pHC11, complete sequence	66570-66603	6	0.824
CP012375_20	20.58\|3606345\|34\|CP012375\|PILER-CR,CRISPRCasFinder,CRT	3606345-3606378	34	NZ_LR027520	Thermus thermophilus isolate TTHNAR1 plasmid 4, complete sequence	338425-338458	6	0.824
CP012375_20	20.58\|3606345\|34\|CP012375\|PILER-CR,CRISPRCasFinder,CRT	3606345-3606378	34	NC_005838	Thermus thermophilus HB27 plasmid pTT27, complete sequence	168234-168267	6	0.824
CP012375_24	24.1\|4278943\|26\|CP012375\|CRISPRCasFinder	4278943-4278968	26	NZ_CP049700	Bradyrhizobium sp. 1S5 strain 323S2 plasmid pB323S2a, complete sequence	172136-172161	6	0.769
CP012375_20	20.10\|3602901\|33\|CP012375\|PILER-CR,CRISPRCasFinder,CRT	3602901-3602933	33	NC_002679	Mesorhizobium japonicum MAFF 303099 plasmid pMLa, complete sequence	151254-151286	7	0.788
CP012375_20	20.50\|3605772\|34\|CP012375\|PILER-CR,CRISPRCasFinder,CRT	3605772-3605805	34	HQ633071	Synechococcus phage S-SKS1 genomic sequence	23104-23137	7	0.794
CP012375_22	22.9\|3612199\|34\|CP012375\|PILER-CR,CRISPRCasFinder,CRT	3612199-3612232	34	LC425515	Uncultured phage DNA, contig: NODE375	18824-18857	7	0.794
CP012375_11	11.1\|2091633\|31\|CP012375\|CRISPRCasFinder	2091633-2091663	31	NZ_CP049158	Caballeronia sp. SBC1 plasmid pSBC1_2, complete sequence	729906-729936	8	0.742
CP012375_11	11.1\|2091633\|31\|CP012375\|CRISPRCasFinder	2091633-2091663	31	NZ_CP049318	Caballeronia sp. SBC2 plasmid pSBC2-2, complete sequence	730376-730406	8	0.742
CP012375_20	20.20\|3603621\|34\|CP012375\|PILER-CR,CRISPRCasFinder,CRT	3603621-3603654	34	NC_014824	Ruminococcus albus 7 = DSM 20455 plasmid pRUMAL01, complete sequence	159295-159328	8	0.765
CP012375_20	20.35\|3604694\|34\|CP012375\|PILER-CR,CRISPRCasFinder,CRT	3604694-3604727	34	MK016664	Synechococcus phage S-B68, complete genome	7447-7480	8	0.765
CP012375_20	20.41\|3605125\|34\|CP012375\|PILER-CR,CRISPRCasFinder,CRT	3605125-3605158	34	NC_004959	Lactococcus lactis W-37 plasmid pSRQ900, complete sequence	4719-4752	8	0.765
CP012375_20	20.41\|3605125\|34\|CP012375\|PILER-CR,CRISPRCasFinder,CRT	3605125-3605158	34	NZ_CP034186	Deinococcus sp. S14-83 strain S14-83T plasmid unnamed2, complete sequence	398391-398424	8	0.765
CP012375_20	20.41\|3605125\|34\|CP012375\|PILER-CR,CRISPRCasFinder,CRT	3605125-3605158	34	NZ_LR214939	Mycoplasma salivarium strain NCTC10113 plasmid 2	194212-194245	8	0.765
CP012375_20	20.51\|3605843\|34\|CP012375\|PILER-CR,CRISPRCasFinder,CRT	3605843-3605876	34	CP003352	Enterococcus faecium Aus0004 plasmid AUS0004_p1, complete sequence	49423-49456	8	0.765
CP012375_20	20.51\|3605843\|34\|CP012375\|PILER-CR,CRISPRCasFinder,CRT	3605843-3605876	34	NZ_LR135294	Enterococcus faecium isolate E7237 plasmid 2	97964-97997	8	0.765
CP012375_20	20.51\|3605843\|34\|CP012375\|PILER-CR,CRISPRCasFinder,CRT	3605843-3605876	34	NC_021995	Enterococcus faecium Aus0085 plasmid p2, complete sequence	58959-58992	8	0.765
CP012375_20	20.51\|3605843\|34\|CP012375\|PILER-CR,CRISPRCasFinder,CRT	3605843-3605876	34	NZ_LR135193	Enterococcus faecium isolate E4438 plasmid 3	58722-58755	8	0.765
CP012375_20	20.51\|3605843\|34\|CP012375\|PILER-CR,CRISPRCasFinder,CRT	3605843-3605876	34	NZ_LT598666	Enterococcus faecium isolate Ef_aus00233 plasmid 4	64296-64329	8	0.765
CP012375_20	20.51\|3605843\|34\|CP012375\|PILER-CR,CRISPRCasFinder,CRT	3605843-3605876	34	NZ_LR135204	Enterococcus faecium isolate E7171 plasmid 2	205040-205073	8	0.765
CP012375_20	20.51\|3605843\|34\|CP012375\|PILER-CR,CRISPRCasFinder,CRT	3605843-3605876	34	NZ_CP040851	Enterococcus faecium strain F17E0263 plasmid p_unnamned2, complete sequence	17719-17752	8	0.765
CP012375_20	20.58\|3606345\|34\|CP012375\|PILER-CR,CRISPRCasFinder,CRT	3606345-3606378	34	NC_010510	Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, complete sequence	463088-463121	8	0.765
CP012375_20	20.58\|3606345\|34\|CP012375\|PILER-CR,CRISPRCasFinder,CRT	3606345-3606378	34	NZ_CP021084	Deinococcus ficus strain CC-FR2-10 plasmid pDFI3, complete sequence	226357-226390	8	0.765
CP012375_20	20.60\|3606488\|33\|CP012375\|PILER-CR,CRISPRCasFinder,CRT	3606488-3606520	33	NZ_CP054618	Azospirillum oryzae strain KACC 14407 plasmid unnamed4, complete sequence	163922-163954	8	0.758
CP012375_20	20.9\|3602830\|34\|CP012375\|PILER-CR,CRISPRCasFinder,CRT	3602830-3602863	34	NZ_CP007616	Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB400, complete sequence	70039-70072	9	0.735
CP012375_20	20.9\|3602830\|34\|CP012375\|PILER-CR,CRISPRCasFinder,CRT	3602830-3602863	34	NZ_CP011152	Bacillus cereus strain CMCC P0021 plasmid pRML04, complete sequence	276184-276217	9	0.735
CP012375_20	20.9\|3602830\|34\|CP012375\|PILER-CR,CRISPRCasFinder,CRT	3602830-3602863	34	NZ_CP045607	Bacillus cereus strain SB1 plasmid p1, complete sequence	579232-579265	9	0.735
CP012375_20	20.9\|3602830\|34\|CP012375\|PILER-CR,CRISPRCasFinder,CRT	3602830-3602863	34	NZ_CP016589	Bacillus thuringiensis strain KNU-07 plasmid pBTKNU07-01, complete sequence	167659-167692	9	0.735
CP012375_20	20.9\|3602830\|34\|CP012375\|PILER-CR,CRISPRCasFinder,CRT	3602830-3602863	34	NZ_CP004877	Bacillus thuringiensis serovar kurstaki str. HD-1 plasmid pBMB431, complete sequence	295955-295988	9	0.735
CP012375_20	20.9\|3602830\|34\|CP012375\|PILER-CR,CRISPRCasFinder,CRT	3602830-3602863	34	NZ_CP004877	Bacillus thuringiensis serovar kurstaki str. HD-1 plasmid pBMB431, complete sequence	297112-297145	9	0.735
CP012375_20	20.9\|3602830\|34\|CP012375\|PILER-CR,CRISPRCasFinder,CRT	3602830-3602863	34	NC_020394	Bacillus thuringiensis serovar thuringiensis str. IS5056 plasmid pIS56-233, complete sequence	93242-93275	9	0.735
CP012375_20	20.9\|3602830\|34\|CP012375\|PILER-CR,CRISPRCasFinder,CRT	3602830-3602863	34	NZ_CP014283	Bacillus thuringiensis strain Bt185 plasmid pBT1850636, complete sequence	242169-242202	9	0.735
CP012375_20	20.9\|3602830\|34\|CP012375\|PILER-CR,CRISPRCasFinder,CRT	3602830-3602863	34	NZ_CP011350	Bacillus thuringiensis strain YC-10 plasmid pYC1, complete sequence	366658-366691	9	0.735
CP012375_20	20.9\|3602830\|34\|CP012375\|PILER-CR,CRISPRCasFinder,CRT	3602830-3602863	34	NZ_CP022446	Bacillus cereus C1L plasmid pC1L1, complete sequence	375882-375915	9	0.735
CP012375_20	20.9\|3602830\|34\|CP012375\|PILER-CR,CRISPRCasFinder,CRT	3602830-3602863	34	NZ_CP032614	Bacillus thuringiensis strain QZL38 plasmid p.1, complete sequence	415758-415791	9	0.735
CP012375_20	20.9\|3602830\|34\|CP012375\|PILER-CR,CRISPRCasFinder,CRT	3602830-3602863	34	NZ_CP004860	Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB422, complete sequence	308382-308415	9	0.735
CP012375_20	20.9\|3602830\|34\|CP012375\|PILER-CR,CRISPRCasFinder,CRT	3602830-3602863	34	NZ_CP053952	Bacillus cereus strain FDAARGOS_798 plasmid unnamed1, complete sequence	210421-210454	9	0.735
CP012375_20	20.9\|3602830\|34\|CP012375\|PILER-CR,CRISPRCasFinder,CRT	3602830-3602863	34	NZ_CP011154	Bacillus cereus strain CMCC P0011 plasmid pRML05, complete sequence	270698-270731	9	0.735
CP012375_20	20.9\|3602830\|34\|CP012375\|PILER-CR,CRISPRCasFinder,CRT	3602830-3602863	34	CP020755	Bacillus thuringiensis strain ATCC 10792 plasmid pLDW-16, complete sequence	330704-330737	9	0.735
CP012375_20	20.9\|3602830\|34\|CP012375\|PILER-CR,CRISPRCasFinder,CRT	3602830-3602863	34	NZ_CP010090	Bacillus thuringiensis serovar galleriae strain 4G5 plasmid pBMB426, complete sequence	299056-299089	9	0.735
CP012375_20	20.9\|3602830\|34\|CP012375\|PILER-CR,CRISPRCasFinder,CRT	3602830-3602863	34	NZ_CP021062	Bacillus thuringiensis strain ATCC 10792 plasmid poh1, complete sequence	546188-546221	9	0.735
CP012375_20	20.9\|3602830\|34\|CP012375\|PILER-CR,CRISPRCasFinder,CRT	3602830-3602863	34	NZ_CP053949	Bacillus cereus strain FDAARGOS_799 plasmid unnamed1, complete sequence	340571-340604	9	0.735
CP012375_20	20.35\|3604694\|34\|CP012375\|PILER-CR,CRISPRCasFinder,CRT	3604694-3604727	34	JX173487	Pseudomonas phage Phi-S1, complete genome	19330-19363	9	0.735
CP012375_20	20.35\|3604694\|34\|CP012375\|PILER-CR,CRISPRCasFinder,CRT	3604694-3604727	34	MT094431	Pseudomonas phage BIM BV-46, complete genome	18730-18763	9	0.735
CP012375_20	20.35\|3604694\|34\|CP012375\|PILER-CR,CRISPRCasFinder,CRT	3604694-3604727	34	KP025626	Pseudomonas phage Pf-10, complete genome	19066-19099	9	0.735
CP012375_20	20.35\|3604694\|34\|CP012375\|PILER-CR,CRISPRCasFinder,CRT	3604694-3604727	34	NC_015264	Pseudomonas phage phiIBB-PF7A, complete genome	18428-18461	9	0.735
CP012375_20	20.50\|3605772\|34\|CP012375\|PILER-CR,CRISPRCasFinder,CRT	3605772-3605805	34	NZ_CP007648	Lactobacillus salivarius strain JCM1046 plasmid pMP1046B, complete sequence	57503-57536	9	0.735
CP012375_20	20.50\|3605772\|34\|CP012375\|PILER-CR,CRISPRCasFinder,CRT	3605772-3605805	34	NC_011258	Borrelia recurrentis A1 plasmid pl37, complete sequence	13925-13958	9	0.735
CP012375_20	20.50\|3605772\|34\|CP012375\|PILER-CR,CRISPRCasFinder,CRT	3605772-3605805	34	NC_011260	Borrelia recurrentis A1 plasmid pl53, complete sequence	29542-29575	9	0.735
CP012375_20	20.50\|3605772\|34\|CP012375\|PILER-CR,CRISPRCasFinder,CRT	3605772-3605805	34	NC_018686	Bacillus thuringiensis MC28 plasmid pMC183, complete sequence	177173-177206	9	0.735
CP012375_20	20.53\|3605985\|37\|CP012375\|PILER-CR,CRISPRCasFinder,CRT	3605985-3606021	37	MN694138	Marine virus AFVG_250M1080, complete genome	31429-31465	9	0.757
CP012375_20	20.53\|3605985\|37\|CP012375\|PILER-CR,CRISPRCasFinder,CRT	3605985-3606021	37	MN693684	Marine virus AFVG_250M122, complete genome	11469-11505	9	0.757
CP012375_20	20.57\|3606273\|35\|CP012375\|PILER-CR,CRISPRCasFinder,CRT	3606273-3606307	35	NZ_LN554848	Aliivibrio wodanis genome assembly AWOD1, plasmid : pAWOD920	24799-24833	9	0.743
CP012375_20	20.58\|3606345\|34\|CP012375\|PILER-CR,CRISPRCasFinder,CRT	3606345-3606378	34	KX815338	Streptomyces phage Joe, complete genome	33035-33068	9	0.735
CP012375_22	22.15\|3612632\|35\|CP012375\|PILER-CR,CRISPRCasFinder,CRT	3612632-3612666	35	NC_014842	Pantoea sp. At-9b plasmid pPAT9B05, complete sequence	90645-90679	9	0.743
CP012375_19	19.1\|3600629\|34\|CP012375\|CRISPRCasFinder	3600629-3600662	34	MN693599	Marine virus AFVG_25M122, complete genome	5114-5147	10	0.706
CP012375_19	19.1\|3600629\|34\|CP012375\|CRISPRCasFinder	3600629-3600662	34	MN693251	Marine virus AFVG_25M125, complete genome	29270-29303	10	0.706
CP012375_19	19.1\|3600629\|34\|CP012375\|CRISPRCasFinder	3600629-3600662	34	MN693438	Marine virus AFVG_25M124, complete genome	4483-4516	10	0.706
CP012375_20	20.34\|3604623\|34\|CP012375\|PILER-CR,CRISPRCasFinder,CRT	3604623-3604656	34	KX190834	Bacillus phage BMBtpLA3, complete genome	20505-20538	10	0.706
CP012375_20	20.34\|3604623\|34\|CP012375\|PILER-CR,CRISPRCasFinder,CRT	3604623-3604656	34	NC_011645	Bacillus phage TP21-L, complete genome	3442-3475	10	0.706
CP012375_20	20.34\|3604623\|34\|CP012375\|PILER-CR,CRISPRCasFinder,CRT	3604623-3604656	34	KF296717	Bacillus phage proCM3, complete genome	21675-21708	10	0.706
CP012375_20	20.34\|3604623\|34\|CP012375\|PILER-CR,CRISPRCasFinder,CRT	3604623-3604656	34	JX887877	Bacillus phage vB_BtS_BMBtp2, complete genome	27129-27162	10	0.706
CP012375_20	20.34\|3604623\|34\|CP012375\|PILER-CR,CRISPRCasFinder,CRT	3604623-3604656	34	MT136606	Bacillus phage vB_BceS_KLEB30-3S, complete genome	3293-3326	10	0.706
CP012375_20	20.41\|3605125\|34\|CP012375\|PILER-CR,CRISPRCasFinder,CRT	3605125-3605158	34	NC_013940	Deferribacter desulfuricans SSM1 megaplasmid pDF308, complete sequence	94658-94691	10	0.706
CP012375_20	20.50\|3605772\|34\|CP012375\|PILER-CR,CRISPRCasFinder,CRT	3605772-3605805	34	MN693898	Marine virus AFVG_250M937, complete genome	4297-4330	10	0.706
CP012375_20	20.50\|3605772\|34\|CP012375\|PILER-CR,CRISPRCasFinder,CRT	3605772-3605805	34	MN694171	Marine virus AFVG_250M572, complete genome	2861-2894	10	0.706
CP012375_20	20.50\|3605772\|34\|CP012375\|PILER-CR,CRISPRCasFinder,CRT	3605772-3605805	34	MN693979	Marine virus AFVG_250M571, complete genome	50870-50903	10	0.706
CP012375_20	20.58\|3606345\|34\|CP012375\|PILER-CR,CRISPRCasFinder,CRT	3606345-3606378	34	MH271308	Microbacterium phage Percival, complete genome	38089-38122	11	0.676
CP012375_20	20.64\|3606772\|36\|CP012375\|PILER-CR,CRISPRCasFinder,CRT	3606772-3606807	36	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	7229-7264	11	0.694
CP012375_22	22.2\|3611698\|34\|CP012375\|PILER-CR,CRISPRCasFinder,CRT	3611698-3611731	34	NZ_CP039925	Agrobacterium tumefaciens strain CFBP7129 plasmid pAtCFBP7129b, complete sequence	91042-91075	11	0.676
CP012375_20	20.56\|3606201\|35\|CP012375\|PILER-CR,CRISPRCasFinder,CRT	3606201-3606235	35	LC547238	Entercoccus phage phiM1EF2 DNA, nearly complete genome	55814-55848	12	0.657

1. spacer 18.1|3543054|48|CP012375|CRISPRCasFinder matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 1, identity: 0.979

cagaatcgagaaacacatcgagaaaacaagcgagagtgttgccctgag	CRISPR spacer
cagaatcgagaaacacagcgagaaaacaagcgagagtgttgccctgag	Protospacer
***************** ******************************

2. spacer 20.3|3602399|36|CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NC_001597 (Microcystis aeruginosa plasmid pMA2 DNA, complete sequence) position: , mismatch: 1, identity: 0.972

acggttcaaccgacctaaaacaactattagcagggg	CRISPR spacer
acggttcaaccgacctgaaacaactattagcagggg	Protospacer
****************.*******************

3. spacer 20.27|3604119|35|CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026286 (Microcystis aeruginosa NIES-2549 plasmid p1, complete sequence) position: , mismatch: 1, identity: 0.971

atctaactgtgacactttgagaattggcactcgat	CRISPR spacer
atctaactgtgacactttgagaattggcacttgat	Protospacer
*******************************.***

4. spacer 20.47|3605559|34|CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NC_001597 (Microcystis aeruginosa plasmid pMA2 DNA, complete sequence) position: , mismatch: 1, identity: 0.971

ggttcaaccgacctaaaacaactattagcagggg	CRISPR spacer
ggttcaaccgacctgaaacaactattagcagggg	Protospacer
**************.*******************

5. spacer 22.10|3612270|34|CP012375|PILER-CR,CRISPRCasFinder,CRT matches to LC425515 (Uncultured phage DNA, contig: NODE375) position: , mismatch: 1, identity: 0.971

aagctttctttcagtacccggctcacaagcctga	CRISPR spacer
aagctttcttccagtacccggctcacaagcctga	Protospacer
**********.***********************

6. spacer 22.23|3613209|35|CP012375|PILER-CR,CRISPRCasFinder,CRT matches to LC425515 (Uncultured phage DNA, contig: NODE375) position: , mismatch: 1, identity: 0.971

agtcttctggcaattaggccgcgccctaaaattgt	CRISPR spacer
agtcttctggcaactaggccgcgccctaaaattgt	Protospacer
*************.*********************

7. spacer 11.2|2091687|22|CP012375|CRISPRCasFinder matches to NC_014533 (Gloeothece verrucosa PCC 7822 plasmid Cy782201, complete sequence) position: , mismatch: 2, identity: 0.909

gctcagtattggcagtgttggc	CRISPR spacer
acttagtattggcagtgttggc	Protospacer
.**.******************

8. spacer 22.8|3612128|34|CP012375|PILER-CR,CRISPRCasFinder,CRT matches to LC425515 (Uncultured phage DNA, contig: NODE375) position: , mismatch: 2, identity: 0.941

gaaaccgaagattaattttatcagactcaaacct	CRISPR spacer
gaaaccgaagattaatcttatcagactcaaatct	Protospacer
****************.**************.**

9. spacer 20.4|3602472|34|CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NC_001597 (Microcystis aeruginosa plasmid pMA2 DNA, complete sequence) position: , mismatch: 3, identity: 0.912

gtttttcggctatttttagcccaattctgtagga	CRISPR spacer
attttttggctatttttagcccaattctgtacga	Protospacer
.*****.************************ **

10. spacer 20.5|3602543|35|CP012375|PILER-CR,CRISPRCasFinder,CRT matches to LC425518 (Uncultured phage DNA, contig: NODE577) position: , mismatch: 3, identity: 0.914

aagtggaattaatgcttaaaaatactgctgaattg	CRISPR spacer
aagtggagttaatgctcaaaaatactgctgaatta	Protospacer
*******.********.*****************.

11. spacer 20.32|3604480|34|CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026286 (Microcystis aeruginosa NIES-2549 plasmid p1, complete sequence) position: , mismatch: 3, identity: 0.912

aagaattttttcgagattgggagaaataggaagt	CRISPR spacer
gagaattttttcgagattgggagaaataggtagc	Protospacer
.***************************** **.

12. spacer 20.60|3606488|33|CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026286 (Microcystis aeruginosa NIES-2549 plasmid p1, complete sequence) position: , mismatch: 3, identity: 0.909

atggcgcggccgatgatgctttttccttcccct	CRISPR spacer
atggcacggccgataatgctttttccttccccc	Protospacer
*****.********.*****************.

13. spacer 1.1|455466|28|CP012375|CRISPRCasFinder matches to MG592600 (Vibrio phage 1.236.O._10N.261.52.C4, partial genome) position: , mismatch: 6, identity: 0.786

gattcatgaatcaaccctacaaagtatt	CRISPR spacer
agtacatgaaccaaccctaccaagtatc	Protospacer
..* ******.********* ******.

14. spacer 15.1|2929015|37|CP012375|CRISPRCasFinder matches to NZ_CP043057 (Dolichospermum sp. UHCC 0315A plasmid pUHCC0315a, complete sequence) position: , mismatch: 6, identity: 0.838

cgggcgttgggtttccttgcgtcaacccaacctacct	CRISPR spacer
atcatgttgggtttccttgcgtcaacccaacctactt	Protospacer
   ..******************************.*

15. spacer 20.50|3605772|34|CP012375|PILER-CR,CRISPRCasFinder,CRT matches to KM359505 (Prochlorococcus phage P-TIM68, complete genome) position: , mismatch: 6, identity: 0.824

gaaaaagaatttgagagaaataagagaagatttg	CRISPR spacer
ggtgtaggatttgacagaaataagagaagatttg	Protospacer
*. . **.****** *******************

16. spacer 20.58|3606345|34|CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019802 (Thermus thermophilus strain HC11 plasmid pHC11, complete sequence) position: , mismatch: 6, identity: 0.824

ccccccttccccctccggcccgacc--ggcgatcga	CRISPR spacer
ccccccttccccctcctggccgacccggacgacc--	Protospacer
**************** * ******  *.***.*

17. spacer 20.58|3606345|34|CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR027520 (Thermus thermophilus isolate TTHNAR1 plasmid 4, complete sequence) position: , mismatch: 6, identity: 0.824

ccccccttccccctccggcccgacc--ggcgatcga	CRISPR spacer
ccccccttccccctcctggccgacccggacgacc--	Protospacer
**************** * ******  *.***.*

18. spacer 20.58|3606345|34|CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NC_005838 (Thermus thermophilus HB27 plasmid pTT27, complete sequence) position: , mismatch: 6, identity: 0.824

ccccccttccccctccggcccgacc--ggcgatcga	CRISPR spacer
ccccccttccccctcctggccgacccggacgacc--	Protospacer
**************** * ******  *.***.*

19. spacer 24.1|4278943|26|CP012375|CRISPRCasFinder matches to NZ_CP049700 (Bradyrhizobium sp. 1S5 strain 323S2 plasmid pB323S2a, complete sequence) position: , mismatch: 6, identity: 0.769

gcgacgctttcaagaaaccgagcgca	CRISPR spacer
cgagcgctttccagaaaccgagcgcg	Protospacer
  ..******* *************.

20. spacer 20.10|3602901|33|CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NC_002679 (Mesorhizobium japonicum MAFF 303099 plasmid pMLa, complete sequence) position: , mismatch: 7, identity: 0.788

ctgtatcgtgccgtcgatttcatccccatagat	CRISPR spacer
atgtaccgggccgtcgatttcatccgaagatat	Protospacer
 ****.** ****************  * * **

21. spacer 20.50|3605772|34|CP012375|PILER-CR,CRISPRCasFinder,CRT matches to HQ633071 (Synechococcus phage S-SKS1 genomic sequence) position: , mismatch: 7, identity: 0.794

gaaaaagaatttgagagaaataagagaagatttg	CRISPR spacer
gaaagatctgttgagacaaataagaaaagatttg	Protospacer
****.*    ****** ********.********

22. spacer 22.9|3612199|34|CP012375|PILER-CR,CRISPRCasFinder,CRT matches to LC425515 (Uncultured phage DNA, contig: NODE375) position: , mismatch: 7, identity: 0.794

tgccgaaaggcaaattcgcaacttttgcggattt	CRISPR spacer
ctttaaaagggaaattcgcaaattttgcggattt	Protospacer
. ...***** ********** ************

23. spacer 11.1|2091633|31|CP012375|CRISPRCasFinder matches to NZ_CP049158 (Caballeronia sp. SBC1 plasmid pSBC1_2, complete sequence) position: , mismatch: 8, identity: 0.742

tttaagtctcgctagtgccagcagcatttta	CRISPR spacer
aataagtctcgctagtgtcagcggcgatcca	Protospacer
  ***************.****.**. *..*

24. spacer 11.1|2091633|31|CP012375|CRISPRCasFinder matches to NZ_CP049318 (Caballeronia sp. SBC2 plasmid pSBC2-2, complete sequence) position: , mismatch: 8, identity: 0.742

tttaagtctcgctagtgccagcagcatttta	CRISPR spacer
aataagtctcgctagtgtcagcggcgatcca	Protospacer
  ***************.****.**. *..*

25. spacer 20.20|3603621|34|CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NC_014824 (Ruminococcus albus 7 = DSM 20455 plasmid pRUMAL01, complete sequence) position: , mismatch: 8, identity: 0.765

gtttgatactgcaattataccta-tttgtgattat	CRISPR spacer
tgttgatactgcaaagatacctattttatgttca-	Protospacer
  ************  ******* ***.** *.*

26. spacer 20.35|3604694|34|CP012375|PILER-CR,CRISPRCasFinder,CRT matches to MK016664 (Synechococcus phage S-B68, complete genome) position: , mismatch: 8, identity: 0.765

atcaatcaag---aaactcaagaaagcaatcaagaaa	CRISPR spacer
---tcttgagcgcaaactcaagaaagcaaacaagaaa	Protospacer
     *..**   **************** *******

27. spacer 20.41|3605125|34|CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NC_004959 (Lactococcus lactis W-37 plasmid pSRQ900, complete sequence) position: , mismatch: 8, identity: 0.765

agtacaaataaaagattatgtaacttttattagt	CRISPR spacer
aatacaaataaaaaattatggaactttcgaaaat	Protospacer
*.***********.****** ******..  *.*

28. spacer 20.41|3605125|34|CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034186 (Deinococcus sp. S14-83 strain S14-83T plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.765

agtacaaataaaagattatgtaacttttattagt	CRISPR spacer
aaaatcgagaaaagattatgaaacatttattagt	Protospacer
*. *. .* *********** *** *********

29. spacer 20.41|3605125|34|CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR214939 (Mycoplasma salivarium strain NCTC10113 plasmid 2) position: , mismatch: 8, identity: 0.765

agtacaaataaaagattatgtaacttttattagt	CRISPR spacer
attatgatgaaaaaattatggaacttttattaga	Protospacer
* **..*  ****.****** ************

30. spacer 20.51|3605843|34|CP012375|PILER-CR,CRISPRCasFinder,CRT matches to CP003352 (Enterococcus faecium Aus0004 plasmid AUS0004_p1, complete sequence) position: , mismatch: 8, identity: 0.765

ctatcagaaaaactgttttatctgttgccactaa	CRISPR spacer
ctatcagaaatactgttttatttgcttcacttat	Protospacer
********** **********.**.* *  .**

31. spacer 20.51|3605843|34|CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR135294 (Enterococcus faecium isolate E7237 plasmid 2) position: , mismatch: 8, identity: 0.765

ctatcagaaaaactgttttatctgttgccactaa	CRISPR spacer
ctatcagaaatactgttttatttgcttcacttat	Protospacer
********** **********.**.* *  .**

32. spacer 20.51|3605843|34|CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NC_021995 (Enterococcus faecium Aus0085 plasmid p2, complete sequence) position: , mismatch: 8, identity: 0.765

ctatcagaaaaactgttttatctgttgccactaa	CRISPR spacer
ctatcagaaatactgttttatttgcttcacttat	Protospacer
********** **********.**.* *  .**

33. spacer 20.51|3605843|34|CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR135193 (Enterococcus faecium isolate E4438 plasmid 3) position: , mismatch: 8, identity: 0.765

ctatcagaaaaactgttttatctgttgccactaa	CRISPR spacer
ctatcagaaatactgttttatttgcttcacttat	Protospacer
********** **********.**.* *  .**

34. spacer 20.51|3605843|34|CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LT598666 (Enterococcus faecium isolate Ef_aus00233 plasmid 4) position: , mismatch: 8, identity: 0.765

ctatcagaaaaactgttttatctgttgccactaa	CRISPR spacer
ctatcagaaatactgttttatttgcttcacttat	Protospacer
********** **********.**.* *  .**

35. spacer 20.51|3605843|34|CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR135204 (Enterococcus faecium isolate E7171 plasmid 2) position: , mismatch: 8, identity: 0.765

ctatcagaaaaactgttttatctgttgccactaa	CRISPR spacer
ctatcagaaatactgttttatttgcttcacttat	Protospacer
********** **********.**.* *  .**

36. spacer 20.51|3605843|34|CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040851 (Enterococcus faecium strain F17E0263 plasmid p_unnamned2, complete sequence) position: , mismatch: 8, identity: 0.765

ctatcagaaaaactgttttatctgttgccactaa	CRISPR spacer
ctatcagaaatactgttttatttgcttcacttat	Protospacer
********** **********.**.* *  .**

37. spacer 20.58|3606345|34|CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NC_010510 (Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, complete sequence) position: , mismatch: 8, identity: 0.765

ccccccttccccctccggcccgaccggcgatcga	CRISPR spacer
gcggccggcctcctccggcccgagcggcgatcgg	Protospacer
 *  **  **.************ *********.

38. spacer 20.58|3606345|34|CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021084 (Deinococcus ficus strain CC-FR2-10 plasmid pDFI3, complete sequence) position: , mismatch: 8, identity: 0.765

ccccccttccccctccggcccgaccggcgatcga	CRISPR spacer
ccgctcgcccccttccggccggaccggcgatccc	Protospacer
** *.* .****.******* ***********

39. spacer 20.60|3606488|33|CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054618 (Azospirillum oryzae strain KACC 14407 plasmid unnamed4, complete sequence) position: , mismatch: 8, identity: 0.758

atggcgcggccgatgatgctttttccttcccct	CRISPR spacer
agggcgcggccgatggtgctctttccgctgccg	Protospacer
* *************.****.***** .. **

40. spacer 20.9|3602830|34|CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007616 (Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB400, complete sequence) position: , mismatch: 9, identity: 0.735

accccgcag-----cactcggatcgatttacgattacct	CRISPR spacer
-----gcaaatttccactccgatggatttacgattacca	Protospacer
     ***.     ***** *** **************

41. spacer 20.9|3602830|34|CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011152 (Bacillus cereus strain CMCC P0021 plasmid pRML04, complete sequence) position: , mismatch: 9, identity: 0.735

accccgcag-----cactcggatcgatttacgattacct	CRISPR spacer
-----gcaaatttccactccgatggatttacgattacca	Protospacer
     ***.     ***** *** **************

42. spacer 20.9|3602830|34|CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045607 (Bacillus cereus strain SB1 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.735

accccgcag-----cactcggatcgatttacgattacct	CRISPR spacer
-----gcaaatttccactccgatggatttacgattacca	Protospacer
     ***.     ***** *** **************

43. spacer 20.9|3602830|34|CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016589 (Bacillus thuringiensis strain KNU-07 plasmid pBTKNU07-01, complete sequence) position: , mismatch: 9, identity: 0.735

accccgcag-----cactcggatcgatttacgattacct	CRISPR spacer
-----gcaaatttccactccgatggatttacgattacca	Protospacer
     ***.     ***** *** **************

44. spacer 20.9|3602830|34|CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP004877 (Bacillus thuringiensis serovar kurstaki str. HD-1 plasmid pBMB431, complete sequence) position: , mismatch: 9, identity: 0.735

accccgcag-----cactcggatcgatttacgattacct	CRISPR spacer
-----gcaaatttccactccgatggatttacgattacca	Protospacer
     ***.     ***** *** **************

45. spacer 20.9|3602830|34|CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP004877 (Bacillus thuringiensis serovar kurstaki str. HD-1 plasmid pBMB431, complete sequence) position: , mismatch: 9, identity: 0.735

accccgcag-----cactcggatcgatttacgattacct	CRISPR spacer
-----gcaaatttccactccgatggatttacgattacca	Protospacer
     ***.     ***** *** **************

46. spacer 20.9|3602830|34|CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NC_020394 (Bacillus thuringiensis serovar thuringiensis str. IS5056 plasmid pIS56-233, complete sequence) position: , mismatch: 9, identity: 0.735

accccgcag-----cactcggatcgatttacgattacct	CRISPR spacer
-----gcaaatttccactccgatggatttacgattacca	Protospacer
     ***.     ***** *** **************

47. spacer 20.9|3602830|34|CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014283 (Bacillus thuringiensis strain Bt185 plasmid pBT1850636, complete sequence) position: , mismatch: 9, identity: 0.735

accccgcag-----cactcggatcgatttacgattacct	CRISPR spacer
-----gcaaatttccactccgatggatttacgattacca	Protospacer
     ***.     ***** *** **************

48. spacer 20.9|3602830|34|CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011350 (Bacillus thuringiensis strain YC-10 plasmid pYC1, complete sequence) position: , mismatch: 9, identity: 0.735

accccgcag-----cactcggatcgatttacgattacct	CRISPR spacer
-----gcaaatttccactccgatggatttacgattacca	Protospacer
     ***.     ***** *** **************

49. spacer 20.9|3602830|34|CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022446 (Bacillus cereus C1L plasmid pC1L1, complete sequence) position: , mismatch: 9, identity: 0.735

accccgcag-----cactcggatcgatttacgattacct	CRISPR spacer
-----gcaaatttccactccgatggatttacgattacca	Protospacer
     ***.     ***** *** **************

50. spacer 20.9|3602830|34|CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032614 (Bacillus thuringiensis strain QZL38 plasmid p.1, complete sequence) position: , mismatch: 9, identity: 0.735

accccgcag-----cactcggatcgatttacgattacct	CRISPR spacer
-----gcaaatttccactccgatggatttacgattacca	Protospacer
     ***.     ***** *** **************

51. spacer 20.9|3602830|34|CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP004860 (Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB422, complete sequence) position: , mismatch: 9, identity: 0.735

accccgcag-----cactcggatcgatttacgattacct	CRISPR spacer
-----gcaaatttccactccgatggatttacgattacca	Protospacer
     ***.     ***** *** **************

52. spacer 20.9|3602830|34|CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053952 (Bacillus cereus strain FDAARGOS_798 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.735

accccgcag-----cactcggatcgatttacgattacct	CRISPR spacer
-----gcaaatttccactccgatggatttacgattacca	Protospacer
     ***.     ***** *** **************

53. spacer 20.9|3602830|34|CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011154 (Bacillus cereus strain CMCC P0011 plasmid pRML05, complete sequence) position: , mismatch: 9, identity: 0.735

accccgcag-----cactcggatcgatttacgattacct	CRISPR spacer
-----gcaaatttccactccgatggatttacgattacca	Protospacer
     ***.     ***** *** **************

54. spacer 20.9|3602830|34|CP012375|PILER-CR,CRISPRCasFinder,CRT matches to CP020755 (Bacillus thuringiensis strain ATCC 10792 plasmid pLDW-16, complete sequence) position: , mismatch: 9, identity: 0.735

accccgcag-----cactcggatcgatttacgattacct	CRISPR spacer
-----gcaaatttccactccgatggatttacgattacca	Protospacer
     ***.     ***** *** **************

55. spacer 20.9|3602830|34|CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010090 (Bacillus thuringiensis serovar galleriae strain 4G5 plasmid pBMB426, complete sequence) position: , mismatch: 9, identity: 0.735

accccgcag-----cactcggatcgatttacgattacct	CRISPR spacer
-----gcaaatttccactccgatggatttacgattacca	Protospacer
     ***.     ***** *** **************

56. spacer 20.9|3602830|34|CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021062 (Bacillus thuringiensis strain ATCC 10792 plasmid poh1, complete sequence) position: , mismatch: 9, identity: 0.735

accccgcag-----cactcggatcgatttacgattacct	CRISPR spacer
-----gcaaatttccactccgatggatttacgattacca	Protospacer
     ***.     ***** *** **************

57. spacer 20.9|3602830|34|CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053949 (Bacillus cereus strain FDAARGOS_799 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.735

accccgcag-----cactcggatcgatttacgattacct	CRISPR spacer
-----gcaaatttccactccgatggatttacgattacca	Protospacer
     ***.     ***** *** **************

58. spacer 20.35|3604694|34|CP012375|PILER-CR,CRISPRCasFinder,CRT matches to JX173487 (Pseudomonas phage Phi-S1, complete genome) position: , mismatch: 9, identity: 0.735

atcaatcaagaaactcaagaaagcaatcaagaaa	CRISPR spacer
ctttggtaagaaactcaagaaggcattcaagaag	Protospacer
 *. . .**************.*** *******.

59. spacer 20.35|3604694|34|CP012375|PILER-CR,CRISPRCasFinder,CRT matches to MT094431 (Pseudomonas phage BIM BV-46, complete genome) position: , mismatch: 9, identity: 0.735

atcaatcaagaaactcaagaaagcaatcaagaaa	CRISPR spacer
ctttggtaagaaactcaagaaggcattcaagaag	Protospacer
 *. . .**************.*** *******.

60. spacer 20.35|3604694|34|CP012375|PILER-CR,CRISPRCasFinder,CRT matches to KP025626 (Pseudomonas phage Pf-10, complete genome) position: , mismatch: 9, identity: 0.735

atcaatcaagaaactcaagaaagcaatcaagaaa	CRISPR spacer
ctttggtaagaaactcaagaaggcattcaagaag	Protospacer
 *. . .**************.*** *******.

61. spacer 20.35|3604694|34|CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NC_015264 (Pseudomonas phage phiIBB-PF7A, complete genome) position: , mismatch: 9, identity: 0.735

atcaatcaagaaactcaagaaagcaatcaagaaa	CRISPR spacer
ctttggtaagaaactcaagaaggcattcaagaag	Protospacer
 *. . .**************.*** *******.

62. spacer 20.50|3605772|34|CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007648 (Lactobacillus salivarius strain JCM1046 plasmid pMP1046B, complete sequence) position: , mismatch: 9, identity: 0.735

gaaaaagaatttgagagaaataagagaagatttg	CRISPR spacer
actaaagaaaatgagagaaataagagaagaccaa	Protospacer
.  ******  *******************.. .

63. spacer 20.50|3605772|34|CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NC_011258 (Borrelia recurrentis A1 plasmid pl37, complete sequence) position: , mismatch: 9, identity: 0.735

gaaaaagaatttgagagaaataagagaagatttg	CRISPR spacer
tgaaggaagttagagagaaattagagaagatttt	Protospacer
 .**...*.** ********* ***********

64. spacer 20.50|3605772|34|CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NC_011260 (Borrelia recurrentis A1 plasmid pl53, complete sequence) position: , mismatch: 9, identity: 0.735

gaaaaagaatttgagagaaataagagaagatttg	CRISPR spacer
tgaaggaagttagagagaaattagagaagatttt	Protospacer
 .**...*.** ********* ***********

65. spacer 20.50|3605772|34|CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NC_018686 (Bacillus thuringiensis MC28 plasmid pMC183, complete sequence) position: , mismatch: 9, identity: 0.735

gaaaaagaatttgagagaaataagagaagatttg	CRISPR spacer
aaaaaagaatttgagaataataagaagactttaa	Protospacer
.***************. *******..*  ** .

66. spacer 20.53|3605985|37|CP012375|PILER-CR,CRISPRCasFinder,CRT matches to MN694138 (Marine virus AFVG_250M1080, complete genome) position: , mismatch: 9, identity: 0.757

attaatactatcttctctatttctttttgaattttgt	CRISPR spacer
ttgaatactatcttctgtaattctttttgattctcag	Protospacer
 * ************* ** ********** *.*..

67. spacer 20.53|3605985|37|CP012375|PILER-CR,CRISPRCasFinder,CRT matches to MN693684 (Marine virus AFVG_250M122, complete genome) position: , mismatch: 9, identity: 0.757

attaatactatcttctctatttctttttgaattttgt	CRISPR spacer
ttgaatactatcttctgtaattctttttgattctcag	Protospacer
 * ************* ** ********** *.*..

68. spacer 20.57|3606273|35|CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LN554848 (Aliivibrio wodanis genome assembly AWOD1, plasmid : pAWOD920) position: , mismatch: 9, identity: 0.743

cctcgctggtttcctttagttttttgatgttttcc	CRISPR spacer
tcatgatggtttcctttagtttattggtgtttggg	Protospacer
.* .* **************** ***.*****

69. spacer 20.58|3606345|34|CP012375|PILER-CR,CRISPRCasFinder,CRT matches to KX815338 (Streptomyces phage Joe, complete genome) position: , mismatch: 9, identity: 0.735

ccccccttccccctccggcccgaccggcgatcga	CRISPR spacer
cagcactacccccttcggcccgaccggcgagacg	Protospacer
*  * ** ******.***************   .

70. spacer 22.15|3612632|35|CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NC_014842 (Pantoea sp. At-9b plasmid pPAT9B05, complete sequence) position: , mismatch: 9, identity: 0.743

gacttaaggccgtcatggcagaccgggatgtaaat	CRISPR spacer
acccgaaggccgtcacggcagaccggcatgtggac	Protospacer
. *. **********.********** ****..*.

71. spacer 19.1|3600629|34|CP012375|CRISPRCasFinder matches to MN693599 (Marine virus AFVG_25M122, complete genome) position: , mismatch: 10, identity: 0.706

tgaatattggattgttgaggggtaattatggctg	CRISPR spacer
gaaactttggattgatgaggggttattatgtggc	Protospacer
 .**. ******** ******** ******

72. spacer 19.1|3600629|34|CP012375|CRISPRCasFinder matches to MN693251 (Marine virus AFVG_25M125, complete genome) position: , mismatch: 10, identity: 0.706

tgaatattggattgttgaggggtaattatggctg	CRISPR spacer
gaaactttggattgatgaggggttattatgtggc	Protospacer
 .**. ******** ******** ******

73. spacer 19.1|3600629|34|CP012375|CRISPRCasFinder matches to MN693438 (Marine virus AFVG_25M124, complete genome) position: , mismatch: 10, identity: 0.706

tgaatattggattgttgaggggtaattatggctg	CRISPR spacer
gaaactttggattgatgaggggttattatgtggc	Protospacer
 .**. ******** ******** ******

74. spacer 20.34|3604623|34|CP012375|PILER-CR,CRISPRCasFinder,CRT matches to KX190834 (Bacillus phage BMBtpLA3, complete genome) position: , mismatch: 10, identity: 0.706

tcaggatcaaaagaattgggattaagatgtaaaa	CRISPR spacer
ccaggatcaaaagagtttggattaaaagacgtta	Protospacer
.*************.** *******.* ...  *

75. spacer 20.34|3604623|34|CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NC_011645 (Bacillus phage TP21-L, complete genome) position: , mismatch: 10, identity: 0.706

tcaggatcaaaagaattgggattaagatgtaaaa	CRISPR spacer
ccaggatcaaaagagtttggattaaaagacgtta	Protospacer
.*************.** *******.* ...  *

76. spacer 20.34|3604623|34|CP012375|PILER-CR,CRISPRCasFinder,CRT matches to KF296717 (Bacillus phage proCM3, complete genome) position: , mismatch: 10, identity: 0.706

tcaggatcaaaagaattgggattaagatgtaaaa	CRISPR spacer
ccaggatcaaaagagtttggattaaaagacgtca	Protospacer
.*************.** *******.* ...  *

77. spacer 20.34|3604623|34|CP012375|PILER-CR,CRISPRCasFinder,CRT matches to JX887877 (Bacillus phage vB_BtS_BMBtp2, complete genome) position: , mismatch: 10, identity: 0.706

tcaggatcaaaagaattgggattaagatgtaaaa	CRISPR spacer
ccaggatcaaaagagtttggattaaaagacgtca	Protospacer
.*************.** *******.* ...  *

78. spacer 20.34|3604623|34|CP012375|PILER-CR,CRISPRCasFinder,CRT matches to MT136606 (Bacillus phage vB_BceS_KLEB30-3S, complete genome) position: , mismatch: 10, identity: 0.706

tcaggatcaaaagaattgggattaagatgtaaaa	CRISPR spacer
ccaggatcaaaagagtttggattaaaagacgtta	Protospacer
.*************.** *******.* ...  *

79. spacer 20.41|3605125|34|CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NC_013940 (Deferribacter desulfuricans SSM1 megaplasmid pDF308, complete sequence) position: , mismatch: 10, identity: 0.706

agtacaaataaaagattatgtaacttttattagt	CRISPR spacer
gtcttatataaaaggttatttaacttttattttt	Protospacer
. . .* *******.**** ***********  *

80. spacer 20.50|3605772|34|CP012375|PILER-CR,CRISPRCasFinder,CRT matches to MN693898 (Marine virus AFVG_250M937, complete genome) position: , mismatch: 10, identity: 0.706

gaaaaagaatttgagagaaataagagaagatttg	CRISPR spacer
aaaaaagaattagagagaaagaagaagttctata	Protospacer
.********** ******** ****..   * *.

81. spacer 20.50|3605772|34|CP012375|PILER-CR,CRISPRCasFinder,CRT matches to MN694171 (Marine virus AFVG_250M572, complete genome) position: , mismatch: 10, identity: 0.706

gaaaaagaatttgagagaaataagagaagatttg	CRISPR spacer
aaaaaagaattagagagaaagaagaagttctata	Protospacer
.********** ******** ****..   * *.

82. spacer 20.50|3605772|34|CP012375|PILER-CR,CRISPRCasFinder,CRT matches to MN693979 (Marine virus AFVG_250M571, complete genome) position: , mismatch: 10, identity: 0.706

gaaaaagaatttgagagaaataagagaagatttg	CRISPR spacer
aaaaaagaattagagagaaagaagaagttctata	Protospacer
.********** ******** ****..   * *.

83. spacer 20.58|3606345|34|CP012375|PILER-CR,CRISPRCasFinder,CRT matches to MH271308 (Microbacterium phage Percival, complete genome) position: , mismatch: 11, identity: 0.676

ccccccttccccctccggcccgaccggcgatcga	CRISPR spacer
gtatctggacccctccagcccgaccggcgagcgt	Protospacer
 . .*.   *******.************* **

84. spacer 20.64|3606772|36|CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 11, identity: 0.694

tcgaaaaagaatttgagagaaataaaagaagatttg	CRISPR spacer
atggtcaaaaattcgagagaaataaaagaagaagaa	Protospacer
 .*.  **.****.******************   .

85. spacer 22.2|3611698|34|CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039925 (Agrobacterium tumefaciens strain CFBP7129 plasmid pAtCFBP7129b, complete sequence) position: , mismatch: 11, identity: 0.676

actcgctaaagtctttggggggagatgtagaaat	CRISPR spacer
ttggtctaaagtctttggggggcgaggtattcag	Protospacer
 .   ***************** ** ***   *

86. spacer 20.56|3606201|35|CP012375|PILER-CR,CRISPRCasFinder,CRT matches to LC547238 (Entercoccus phage phiM1EF2 DNA, nearly complete genome) position: , mismatch: 12, identity: 0.657

tttattagattttttttgtgctatcatagtagaat	CRISPR spacer
acaggcgtcttttttttgtgctataatagaagaaa	Protospacer
 . . ..  *************** **** ****

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

3583463 : 3642238

Bodo_saltans_virus(25.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AOC54379.1\|3583463_3584048_-\|transposase	transposase	NA	NA	NA	NA
AOC54380.1\|3584067_3584223_-\|transposase	transposase	NA	NA	NA	NA
AOC54381.1\|3584271_3584430_-\|transposase	transposase	NA	NA	NA	NA
AOC54382.1\|3584736_3586131_-	hypothetical protein	NA	NA	NA	NA
AOC54383.1\|3586570_3588274_-	Sulfate permease	NA	NA	NA	NA
AOC54384.1\|3588573_3590538_-	Lycopene cyclase, CruA type	NA	NA	NA	NA
AOC54385.1\|3590683_3590926_+	hypothetical protein	NA	NA	NA	NA
AOC54386.1\|3590933_3591749_+	hypothetical protein	NA	NA	NA	NA
AOC54387.1\|3592745_3593807_-	Putative transport system permease protein	NA	NA	NA	NA
AOC54388.1\|3594009_3594318_+	Cytochrome c, class I	NA	NA	NA	NA
AOC54389.1\|3594657_3596811_+	hypothetical protein	NA	NA	NA	NA
AOC54390.1\|3596828_3598994_+	hypothetical protein	NA	NA	NA	NA
AOC54391.1\|3599006_3599540_+	hypothetical protein	NA	NA	NA	NA
AOC54392.1\|3599578_3600022_+	Mobile element protein	NA	NA	NA	NA
AOC54393.1\|3599976_3600471_+	Mobile element protein	A0A2H4UV16	Bodo_saltans_virus	1.4e-13	34.9
AOC54394.1\|3600794_3602021_-	Transposase	A9YX10	Burkholderia_phage	1.6e-26	26.8
AOC54395.1\|3604511_3604670_+	hypothetical protein	NA	NA	NA	NA
AOC54396.1\|3607558_3607690_+	hypothetical protein	NA	NA	NA	NA
AOC54397.1\|3607916_3609065_-	Mobile element protein	NA	NA	NA	NA
AOC54398.1\|3610024_3611521_+\|transposase	transposase	NA	NA	NA	NA
AOC54399.1\|3612664_3612799_+	hypothetical protein	NA	NA	NA	NA
AOC54400.1\|3613727_3614000_-	CRISPR-associated protein Cas2	NA	NA	NA	NA
AOC54401.1\|3614012_3615017_-	CRISPR-associated protein Cas1	NA	NA	NA	NA
AOC54402.1\|3615022_3615616_-	CRISPR-associated RecB family exonuclease Cas4	NA	NA	NA	NA
AOC54403.1\|3615618_3616452_-	CRISPR repeat RNA endoribonuclease Cas6	NA	NA	NA	NA
AOC54404.1\|3616451_3617018_-	Protein of unknown function DUF820	NA	NA	NA	NA
AOC54405.1\|3617058_3619794_-	CRISPR-associated helicase Cas3	NA	NA	NA	NA
AOC54406.1\|3619786_3620476_-	hypothetical protein	NA	NA	NA	NA
AOC54407.1\|3620614_3621508_-	hypothetical protein	NA	NA	NA	NA
AOC54408.1\|3621510_3624042_-	hypothetical protein	NA	NA	NA	NA
AOC54409.1\|3624129_3624294_-	hypothetical protein	NA	NA	NA	NA
AOC54410.1\|3624829_3625687_+	hypothetical protein	NA	NA	NA	NA
AOC54411.1\|3625795_3626158_+	Mobile element protein	NA	NA	NA	NA
AOC54412.1\|3626177_3626762_+\|transposase	transposase	NA	NA	NA	NA
AOC54413.1\|3626853_3627276_+	Pterin-binding family	NA	NA	NA	NA
AOC54414.1\|3627561_3628425_-	High-affinity branched-chain amino acid transport system permease protein LivH	NA	NA	NA	NA
AOC54415.1\|3628695_3629205_+	pentapeptide repeat protein	NA	NA	NA	NA
AOC54416.1\|3629204_3630329_+	Phosphoribosylaminoimidazole carboxylase ATPase subunit	NA	NA	NA	NA
AOC54417.1\|3630464_3631403_-	hypothetical protein	NA	NA	NA	NA
AOC54418.1\|3631544_3632657_-	Mobile element protein	A0A0R8V9X2	Thermobifida_phage	1.1e-122	61.0
AOC54419.1\|3632767_3632902_+	hypothetical protein	NA	NA	NA	NA
AOC54420.1\|3632858_3632984_-	hypothetical protein	NA	NA	NA	NA
AOC54421.1\|3633284_3635276_+	sensory transduction histidine kinase	A0A1V0SGX0	Hokovirus	8.8e-22	31.2
AOC54422.1\|3635546_3636752_+	Argininosuccinate synthase	NA	NA	NA	NA
AOC54423.1\|3636947_3637067_+	fdxN element excision controlling factor protein	NA	NA	NA	NA
AOC54424.1\|3637147_3637363_+	FdxN element excision controlling factor protein	NA	NA	NA	NA
AOC54425.1\|3637350_3637692_+	XisI protein-like	NA	NA	NA	NA
AOC54426.1\|3637841_3638228_+	hypothetical protein	NA	NA	NA	NA
AOC54427.1\|3638493_3638649_-	hypothetical protein	NA	NA	NA	NA
AOC54428.1\|3638700_3639396_+	hypothetical protein	NA	NA	NA	NA
AOC54429.1\|3639507_3639708_+	hypothetical protein	NA	NA	NA	NA
AOC54430.1\|3640042_3640186_-	hypothetical protein	NA	NA	NA	NA
AOC54431.1\|3640184_3640994_+	GMP synthase	NA	NA	NA	NA
AOC54432.1\|3641099_3641717_-	Mobile element protein	NA	NA	NA	NA
AOC54433.1\|3641788_3642238_-\|transposase	transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage