CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number
CP017253	Clostridium taeniosporum strain 1/k chromosome, complete genome	2 crisprs	cas3,csa3,DEDDh,WYL,DinG,RT	1	1	9
CP017255	Clostridium taeniosporum strain 1/k plasmid pCt2, complete sequence	0 crisprs	NA	0	0	0
CP017256	Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence	7 crisprs	WYL	0	29	0
CP017254	Clostridium taeniosporum strain 1/k plasmid pCt1, complete sequence	0 crisprs	NA	0	0	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP017253_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP017253_2

346946-347043

Orphan

Consensus_repeat	Method
CAATTGTTAATATTATAACAATT	CRISPRCasFinder

1 spacers

csa3

The CRISPR arrays of CP017253_2

>merge|CP017253|2|346946-347043|CRISPRCasFinder
CAATTGTTAATATTATAACAATTGGTAACAATTGTTGACATAATAAGACTATTTAAGGCCTTTTATTTTTAAGTTTAATTGTTAATATTATAACAATT

>CP017253|2|1|346946-347043|CRISPRCasFinder
CAATTGTTAATATTATAACAATT	GGTAACAATTGTTGACATAATAAGACTATTTAAGGCCTTTTATTTTTAAGTT
TAATTGTTAATATTATAACAATT

Protein	Signature genes	Signature genes Name	Protein_function
CP017253.2\|AOR22506.1\|334725_335514_+\|electron-transfer-flavoprotein-subunit-beta	unknown	unknown	gnl\|CDD\|224997
CP017253.2\|AOR22510.1\|339541_340756_+\|zinc-chelation-protein-SecC	unknown	unknown	gnl\|CDD\|179393
CP017253.2\|AOR22523.1\|353676_355161_+\|iron-hydrogenase	unknown	unknown	gnl\|CDD\|274983
CP017253.2\|AOR22514.1\|343519_345781_+\|cadmium-translocating-P-type-ATPase	unknown	unknown	gnl\|CDD\|319847
CP017253.2\|AOR22520.1\|351083_351932_+\|3-hydroxybutyryl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|180269
CP017253.2\|AOR22512.1\|342266_342848_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376406
CP017253.2\|AOR22511.1\|340932_342000_+\|mannose-1-phosphate-guanylyltransferase	unknown	unknown	gnl\|CDD\|223906
CP017253.2\|AOR22507.1\|335601_336792_+\|electron-transfer-flavoprotein-subunit-alpha	unknown	unknown	gnl\|CDD\|224936
CP017253.2\|AOR22509.1\|338536_339379_+\|patatin-family-protein	unknown	unknown	gnl\|CDD\|132847
CP017253.2\|AOR22508.1\|336796_338200_+\|FAD-binding-oxidoreductase	unknown	unknown	gnl\|CDD\|223354
CP017253.2\|AOR22516.1\|347169_347952_+\|crotonase	unknown	unknown	gnl\|CDD\|180270
CP017253.2\|AOR22515.1\|346189_346822_+\|redox-sensing-transcriptional-repressor-Rex	unknown	unknown	gnl\|CDD\|235486
CP017253.2\|AOR22519.1\|349992_351000_+\|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	unknown	unknown	gnl\|CDD\|224936
CP017253.2\|AOR22522.1\|352592_353516_+\|8-oxoguanine-DNA-glycosylase	unknown	unknown	gnl\|CDD\|223200
CP017253.2\|AOR22517.1\|348032_349172_+\|acyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|173847
CP017253.2\|AOR22513.1\|343135_343501_+\|transcriptional-regulator	csa3	COG0640_csa3_CAS-I-A	gnl\|CDD\|197713
CP017253.2\|AOR22518.1\|349187_349970_+\|electron-transfer-flavoprotein-subunit-beta	unknown	unknown	gnl\|CDD\|224997
CP017253.2\|AOR22521.1\|352082_352511_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|213664
CP017253.2\|AOR22525.1\|356240_357665_+\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|223715
CP017253.2\|AOR22524.1\|355541_356237_+\|DNA-binding-response-regulator	unknown	unknown	gnl\|CDD\|223816

Protein	Function_ID	Function_description	E-value
CP017253.2\|AOR22506.1\|334725_335514_+\|electron-transfer-flavoprotein-subunit-beta	gnl\|CDD\|224997	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion].	1.8806e-91
CP017253.2\|AOR22510.1\|339541_340756_+\|zinc-chelation-protein-SecC	gnl\|CDD\|179393	PRK02250, PRK02250, hypothetical protein; Provisional.	4.76817e-11
CP017253.2\|AOR22523.1\|353676_355161_+\|iron-hydrogenase	gnl\|CDD\|274983	TIGR04105, hypothetical_protein, [FeFe] hydrogenase, group B1/B3. See for descriptions of different groups.	0
CP017253.2\|AOR22514.1\|343519_345781_+\|cadmium-translocating-P-type-ATPase	gnl\|CDD\|319847	cd07548, P-type_ATPase-Cd_Zn_Co_like, P-type heavy metal-transporting ATPase, similar to Bacillus subtilis CadA which appears to transport cadmium, zinc and cobalt but not copper out of the cell. Bacillus subtilis CadA/YvgW appears to transport cadmium, zinc and cobalt but not copper, out of the cell. Functions in metal ion resistance and cellular metal ion homeostasis. CadA/YvgW is also important for sporulation in B. subtilis, the significant specific expression of the cadA/yvgW gene during the late stage of sporulation, is controlled by forespore-specific sigma factor, sigma G, and mother cell-specific sigma factor, sigma E. This subfamily also includes Helicobacter pylori CadA an essential resistance pump with ion specificity towards Cd(2+), Zn(2+) and Co(2+), and Zn-transporting ATPase, ZiaA(N) in Synechocystis PCC 6803. Transcription of ziaA is induced by Zn under the control of the Zn responsive repressor ZiaR. This subclass of P-type ATPase is also referred to as CPx-type ATPases because their amino acid sequences contain a characteristic CPC or CPH motif associated with a stretch of hydrophobic amino acids and N-terminal ion-binding sequences. This subfamily belongs to the P-type ATPases, a large family of integral membrane transporters that are of critical importance in all kingdoms of life. They generate and maintain (electro-) chemical gradients across cellular membranes, by translocating cations, heavy metals and lipids, and are distinguished from other main classes of transport ATPases (F- , V- , and ABC- type) by the formation of a phosphorylated (P-) intermediate state in the catalytic cycle.	0
CP017253.2\|AOR22520.1\|351083_351932_+\|3-hydroxybutyryl-CoA-dehydrogenase	gnl\|CDD\|180269	PRK05808, PRK05808, 3-hydroxybutyryl-CoA dehydrogenase; Validated.	0
CP017253.2\|AOR22512.1\|342266_342848_+\|hypothetical-protein	gnl\|CDD\|376406	pfam00882, Zn_dep_PLPC, Zinc dependent phospholipase C.	1.64205e-15
CP017253.2\|AOR22511.1\|340932_342000_+\|mannose-1-phosphate-guanylyltransferase	gnl\|CDD\|223906	COG0836, {ManC}, Mannose-1-phosphate guanylyltransferase [Cell envelope biogenesis, outer membrane].	2.42582e-145
CP017253.2\|AOR22507.1\|335601_336792_+\|electron-transfer-flavoprotein-subunit-alpha	gnl\|CDD\|224936	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion].	1.51944e-119
CP017253.2\|AOR22509.1\|338536_339379_+\|patatin-family-protein	gnl\|CDD\|132847	cd07208, Pat_hypo_Ecoli_yjju_like, Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.	4.29325e-109
CP017253.2\|AOR22508.1\|336796_338200_+\|FAD-binding-oxidoreductase	gnl\|CDD\|223354	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion].	7.0102e-131
CP017253.2\|AOR22516.1\|347169_347952_+\|crotonase	gnl\|CDD\|180270	PRK05809, PRK05809, short-chain-enoyl-CoA hydratase.	1.95419e-168
CP017253.2\|AOR22515.1\|346189_346822_+\|redox-sensing-transcriptional-repressor-Rex	gnl\|CDD\|235486	PRK05472, PRK05472, redox-sensing transcriptional repressor Rex; Provisional.	3.67693e-116
CP017253.2\|AOR22519.1\|349992_351000_+\|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	gnl\|CDD\|224936	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion].	8.93911e-135
CP017253.2\|AOR22522.1\|352592_353516_+\|8-oxoguanine-DNA-glycosylase	gnl\|CDD\|223200	COG0122, AlkA, 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase [DNA replication, recombination, and repair].	5.45726e-50
CP017253.2\|AOR22517.1\|348032_349172_+\|acyl-CoA-dehydrogenase	gnl\|CDD\|173847	cd01158, SCAD_SBCAD, Short chain acyl-CoA dehydrogenases and eukaryotic short/branched chain acyl-CoA dehydrogenases. Short chain acyl-CoA dehydrogenase (SCAD). SCAD is a mitochondrial beta-oxidation enzyme. It catalyzes the alpha,beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of SCAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. This subgroup also contains the eukaryotic short/branched chain acyl-CoA dehydrogenase(SBCAD), the bacterial butyryl-CoA dehydorgenase(BCAD) and 2-methylbutyryl-CoA dehydrogenase, which is involved in isoleucine catabolism. These enzymes are homotetramers.	0
CP017253.2\|AOR22513.1\|343135_343501_+\|transcriptional-regulator	gnl\|CDD\|197713	smart00418, HTH_ARSR, helix_turn_helix, Arsenical Resistance Operon Repressor.	1.21287e-21
CP017253.2\|AOR22518.1\|349187_349970_+\|electron-transfer-flavoprotein-subunit-beta	gnl\|CDD\|224997	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion].	1.66711e-90
CP017253.2\|AOR22521.1\|352082_352511_+\|hypothetical-protein	gnl\|CDD\|213664	TIGR01909, Uncharacterized_protein_AF_0456, C_GCAxxG_C_C family probable redox protein. This model represents a putative redox-active protein of about 140 residues, with four perfectly conserved Cys residues. It includes a CGAXXG motif. Most members are found within one or two loci of transporter or oxidoreductase genes. A member from Geobacter sulfurreducens, located in a molybdenum transporter operon, has a TAT (twin-arginine translocation) signal sequence for Sec-independent transport across the plasma membrane, a hallmark of bound prosthetic groups such as FeS clusters.	3.91107e-31
CP017253.2\|AOR22525.1\|356240_357665_+\|sensor-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	6.00514e-54
CP017253.2\|AOR22524.1\|355541_356237_+\|DNA-binding-response-regulator	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	4.763e-76

>CP017253.2|AOR22515.1|346189_346822_+|redox-sensing-transcriptional-repressor-Rex
MDKNKNISMAVVKRLPKYHRYLNELMKNDVDRISSKELGEKIGFTASQIRQDLNCFGDFGQQGYGYNVKELYTQINSILGLDKEYNAVLIGAGNIGQAIANYTRFDKLGIMITAIFDANPKLIGIKIRDIEIRDIDELGSFLNFNSTAIGVICVPKKSAQKVSDELIKGGIKGIWNFAPIDLVVPEDVKVENVHLSDSISTLIYQLHQQS
>CP017253.2|AOR22514.1|343519_345781_+|cadmium-translocating-P-type-ATPase
MDDEMKLSLNGLDCANCANKIERKVNDMEDVEEANMNFSLGKLTVKLHENKDKEKVFNLIKDIVKKLEPHVIVTDEKDVFNNKVNINKLNYSCKKPCCSHESCATHNNGNSTHVHVKKYNHSENISHDNKTNSTTKLFDKKKFFYENQVSIIGLILYIIAILFREENYLNTSIFIFSYILIGGEVLKIAFKNILRGEIFDENFLMTIATVGALAIGEYPEAVGVMMFYKIGELFQGYAVNKSRKSITSLMNIRPEYANIITNQGEQKVSPEEVKKNDFIVVKPGERIPLDGVVIEGTGSIDTSALTGESLPREINVGDELLSGSINLNSVIKLKVTKMFSESTVSKILNLVENSSSKKAKTEKFITKFSRLYTPIVVFLAIAVAIIPPILIKGEVFSDWLYRALIFLVISCPCALVISVPLGLFAGIGGASKKGILIKGGNYIEVLKNVDTVVFDKTGTLTKGTFKVSEINAIDMEKEDFLRISALGESFSNHPIAKSIVKEFKGELKKDNVEDYKELSGHGIKAVIEGKNVILGNYKLLEDNNINLKKVEKAGTVVYVSIDGKYSGNIVIADEIKEDSIKAIKKLKTTGIKRTVMLTGDNNIVANSVAKVIGIDEVKSELLPGDKVLEIEKLITNNQSKGKVMFVGDGINDAPVLARADVGIAMGGIGSDAAIEAADVVLMKDNPLALSDAIKISKKVNLILWQNIIFALGVKIFVLVLGAFGIANMWEAVFADVGVTLIAILNSMRSLKNN
>CP017253.2|AOR22513.1|343135_343501_+|transcriptional-regulator
MNNENNFVENCKCNIIHEDIVMKVKDLLPQEEILYDLAELFKVFGDSTRIKIICALFESELCVCDMAALLGMTQSAISHQLRTLKSARLVKFRREGKVIYYSLDDEHIKHIFDEGFKHITE
>CP017253.2|AOR22512.1|342266_342848_+|hypothetical-protein
MMNTHKIIAQNILNYTNSKSIYLINDYRFIWGNIKPDCVLKYKMIKHYFIESIDIMIKKIERLCSLSLQDIYYKVSVNKFSEELGVICHFMCDYFCAPHYYRWEFKSTSQVKNHVMYEKDLGKIAKEFNSKGCITSSIDIDNIKEFIYDLQNQYKGSLDFKNDLTYAYYVCNSIVNMVLNRVFLNECSLSKVV
>CP017253.2|AOR22511.1|340932_342000_+|mannose-1-phosphate-guanylyltransferase
MIYGLILAGGKGSRLYPLSRNNQPKQFLKVINDKSFLVNTVERIKPLIDRENIYVVTNTDYENKIKEEIPNIKKENIFIEPANKETATCIGLSAVKLLKQDADAIMVVLPSDHYIQGEKEYLDTLSQAVEMANKKRCIVTLGIEPTRPETGYGYIEMGDRYSGNISTYKIARFTEKPNLEIAKDFLLKGTYLWNSGMFVFRADVILREIEKYIPKMHKSLMEIYKHVGEEDEEKVIKEQYDIIDGISIDFGVMQKTRKAFVIKCDFNWDDIGSFNALSRFLGKYRNNSVSKNVYMEDCESCSVFGGKNLIIGFGIKDLVIVDAGDVILVMDKNRDQEIKHLLNKLNSEDKYNKFL
>CP017253.2|AOR22510.1|339541_340756_+|zinc-chelation-protein-SecC
MIKKECSKKYMNNEFIENKENDESAELYDNMMDDLFEKYENKMNRMFVKGVYSFEVSEQLKSLSKEAIYSIARNLGMSRISTLNKDALIEKVLTEYNEIIEKQFIYFEEERFDILKNYINNGGVKVFDEIDTYELSRTAYFMQQGIIFPSTKDEKAVFLMPKIVQDIIREKENSEYTNRLKKNREILDLYRGLNKAYGIVNTKDVISLLQRYDIDNSEEFNINEIIKEAQYYYREYREEKGFFINNNIENWSDLLNDIEKDNNNLEYCNINKNELLNMIDHEWIYKSKFGKAFLKEFTNIFEIKKEMVYQIMDDLSFDIQDNNIDETINSLLELINADNIELRNYIKGLANKFLSNIRLWKYKGATLNEINGKDKEVKTKITVGRNDPCICGSGKKYKKCCGKN
>CP017253.2|AOR22509.1|338536_339379_+|patatin-family-protein
MTGLVLEGGAFRGLFTAGVLDALLDMNLDMKYIVGVSAGITNGYSYVSRQRGRNLEVMEKFINHKRYVGYRNLLKCKSIMDMDFVFDEIPNEHCPFDYETFDKFDGKVLAGSVNVNTGEVEYFDKKHIENQNTILRATCSIPLLFQFVEIKNQFYADGGLIDAIPIKKSVFDGNNKNIIVLTRNEGYRKHESKVSKFVYKLYRKRYPKLAEALKNRHIQYNNQLDYCKELENKNEAIIIRPTIEMNIGRFERDKNKLKEIYNNGYNETIKIREKLIKFID
>CP017253.2|AOR22508.1|336796_338200_+|FAD-binding-oxidoreductase
MTYKNIDIKDYEYILSIAENDKERVFFGDEINEDYSHDELGGIKKMPDIVVQAISTEEVSKIMKYAYENSIPVTPRGSGTGLVGAAVPIKGGIVIDLCRMNKILELDEENLTLTLEPGVLLMEIGKYVEEFDLFYPPDPGEKSATIGGNISTNAGGMRAVKYGVTRDYVRGLEVVLPNGKVVELGGKVVKNSSGYSLKDLIIGAEGTLGIVTKAILKLLPLPKKSLSLLIPFPTLENAIDTVPKIIKSKTIPTAIEFMQREAILAAEEFLGKSFPDKSSDAYLLLTFDGNSTEEIEKAYENVANICLDADAIDVFISDTEERQESIWSARGCFLEAIKALTTEMDEVDVVVPRNKIGEFVKFTHELESKYNIRIKSFGHAGDGNLHIYILRDLLDENVWYEKLELVMKDMYDKSNELMGQVSGEHGIGFAKKPYLKESLSDDIISVMEGIKLSFDPKNILNPGKIFK
>CP017253.2|AOR22507.1|335601_336792_+|electron-transfer-flavoprotein-subunit-alpha
MAKLVVNQEKITNKEELIKICPFGALEINNGKVEINGACKMCKLCVKKGPKGAVEYIEDEVKAIDKSLWRGISVYVDHVNGKIHPVTYELIGKARELAAKINHPVYCVFIGHNILDEAKELLHYGVDKVFVYDDEELKDFRIETYAAAFEEFIKKVKPSSILVGATTIGRSLAPRIAARFRTGLTADCTILDIKEDTDLVQIRPAFGGNIMAQIVTPNSRPQLATVRYKVMTAPERKDETNGEIIKCEIKKDKLNSGIKVLEIKEKNTEVGISDAEVIVAAGRGVKSEKDLTMIKELAELLGAEFACTRPLIEAGWVDAKRQIGLSGRTVRPRLIITCGISGAVQFSAGMNNSDYIFAINSDEKAPIFKVAHYGIVGNMYDIIPQLIEKVKMSKGA
>CP017253.2|AOR22506.1|334725_335514_+|electron-transfer-flavoprotein-subunit-beta
MNILVCIKQVPGTSKVEVDQATGVLKRDGIDSKMNPYDLYALETALRIKESKGGTVKVLSMGPNQALSVIKEAYSMGADDGALLSDRKFGGADVLATSYTISQGVRKMGDFQLIICGKQTTDGDTAQVGPEMAEYLNIPHVANVERIIEVKEESVIVEMDMPETLEVVEISYPCLITVNKGIFEPRLPSYRKKIATKDKKISIMSLADFEDRNEKKYGLNGSPTQVERIFPPEVNDDREMWTGDSNELVEKIEHKLKEFKFI
>CP017253.2|AOR22516.1|347169_347952_+|crotonase
MELKNVILEKEGHLATVIINRPKALNALNSETLKDLDVVLENLENDSNIYAVILTGSGEKSFVAGADISEMKDLNEQQGKEFGELGNKVFLRLEKLNKPVIAAISGFALGGGCELAMACDIRIASEKARFAQPEAGLGITPGFGGTQRLPRIVGMGKAKELIYTCAQVKADEALRIGLVNKVVSLENLMDEAKAMAEKIIVNAPVAVKLCKDAINRGMQVDIDKAVLIEAEDFGKCFSTEDQKEGMTAFLERREKNFQNK
>CP017253.2|AOR22517.1|348032_349172_+|acyl-CoA-dehydrogenase
MNFQLTREQELVQQMVREFAQNEVKPIAAEVDETERFPMENVEKMGKIGMMGIPFAKEFGGAGGDVLSYIMTVEELSKVCATTGVIVSAHTSLCASVINENGTPEQKAKYLPDLCQGKKIGAFGLTEPGAGTDAAGQQTTAVLDGDHYVLNGSKIFITNGGVAETFIIFAMTDKSKGTKGISAFIVEKSFPGFSIGKLEDKMGIRGSSTTELVMEECIVPKENLIGKEGKGFGIAMKTLDGGRIGIAAQALGIAEGAFEEAVNYMKERKQFKRPLSAQQGLQWYIAEMDVKIEAARHLVYKAACKKQNKQPYSVDAARAKLFAAEVAMEVTTKAVQIFGGYGYTKEYPVERMMRDAKITEIYEGTSEVQKMVIAGSILR
>CP017253.2|AOR22518.1|349187_349970_+|electron-transfer-flavoprotein-subunit-beta
MNIVVCVKQVPDTTAVKIDPKTGTLIRDGVPSIMNPEDKHALEGALQLKETIGAKVTVISMGLPMAKATLREALCMGADEAILLTDRVLGGADTLATSKALAGVIAKLDYDIVFAGRQAIDGDTAQVGPEIAEHLNIPQVTYVQGVEAKGDKELIVNRALEDGFEKIQIQTPCLLTAIEELNEPRYMSVAKIFATSDDQIKVMSADDIDVDKAELGLKGSPTKVKKSMTKEVKGAGEVINKPAKESVAYVVEKLQEKHYI
>CP017253.2|AOR22519.1|349992_351000_+|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein
MNIADYNGVWVFAEQREGQLQKVSLELLGEGRKIADKLGVKLTALLLGNNIENLAKTLGEHGADEVLVAEDKNLEHYTTDAYTKVICDLANERKPGILFIGATFIGRDLGPRVAARLSTGLTADCTSLDVEVEGGALLATRPAFGGNLMATIACPEHRPQMATVRPGVFGKITTDASKCNIEKVEAKLSDSDVRTKVLEIIKEHKDVVDISEAKVLVAGGRGVGSKENFALLQELAVALDGTVAGSRAAVENGWIERDYQVGQTGKTVRPSIYIACGISGAIQHVAGMQESDMIIAINKDETAPIMQVADYGIVGDVSKVLPELIAQVKEVKSAE
>CP017253.2|AOR22520.1|351083_351932_+|3-hydroxybutyryl-CoA-dehydrogenase
MKKVFVLGAGTMGAGIVQAFAQHGYEVIVRDIKDEFVERGIAGINKGLTRLVSKGKMTEEVKEEILSRISGTTDMKLAADCDLVVEAAVENMKIKREIFAELDGICKPETILASNTSSLSITEVASATNRPDKVIGMHFFNPAPVMKLVEIIRGMATSQETFDAIKELTVAIEKNPVEVAEAPGFVVNRILIPMINEGIGILAEGIASVEDIDTAMKYGANHPMGPLALGDLIGLDVCLAIMDVLYNETGDTKYRAHSLLRKYVRAGWLGRKTGRGFYDYSK
>CP017253.2|AOR22521.1|352082_352511_+|hypothetical-protein
MLKELAQKYWDDKYDLNCAECLIYAANEEYELNLSKETLKTMSAFGGGMAIGEMCGVISGAIAAIGIMFTNISGHKSPIVREMTTEFINKFKDILGSNNCIKLREEYKKSKEDGTCIVMVETAAEILQDIVIKYDKFRVNWN
>CP017253.2|AOR22522.1|352592_353516_+|8-oxoguanine-DNA-glycosylase
MDYKKIETSNNSIIIKGVKNFNLKHIFECGQIFRFEEIQKDNFIVIAFGRLIELVQRNNEVFVYNTTEEEVKEIWLNYFDLNRDYSNIKEELSKDELLKQSIEFGYGIRVLNQDSFEMLLSFIISARNNIPSIKKTVNKISEKWGNKIEYKGKIYYSFPTIQQIKDATLDEIKETGASFRSKYLLDTIQNIYRSTINDSEIQDNEDSFNVYNLDYIKKLNDDECHKALQEFKGVGAKVADCIMLFSMGKTSAFPVDVWVKRAMIHFYNAEEGSLNKIRIFARNKFGKLSGFAQQYLFYYARENNIKV
>CP017253.2|AOR22523.1|353676_355161_+|iron-hydrogenase
MFNFENQLIKLKHDVLSNIVRLAKENKINKENLEKIPYEMLPGDEPKYRESIIHEREVLLERLKLAAGFIPNGKGTDDLINIEDEEQILYVIKNACDMCPTKKFEVTDACRNCIAHKCQSVCKFGAISYVDGKAYIDPDKCKECGMCKKACPYDAIAEDMRPCKKSCPTGALDINSDKKAMIKQEKCVNCGACMAACPFGALEDKSLLVKVVKELTSNSNIYAVVAPAITGQLNSKTTYGQVKNAMRELGFTDMIEAACGADAVTVHESNEFVERMENGDSYMTNSCCPGFLSYIEKIMPDQVDRISGTVSPMVATGRFIKANDKNAKVVFIGPCTAKKSEILRDSIKDAVDYALTFEELLALFEGFDIDPSNFDDIVVDEASVFGRGFGAGGGLTAAIENYVKDKGIECEFKPVKVSGGAEIKKTMMMAKMGRLQGNFIEGMMCEGGCINGPGKILSPMKAKASFNKINKQSSMKNVLENSRIEDYKDINLER
>CP017253.2|AOR22524.1|355541_356237_+|DNA-binding-response-regulator
MKILLVDDEESILNLIKMNLIFENYEVITAECGIDAIELFKNESPDLIVLDLMLPDKDGFEVIHEFQKINSEVPIIILSAKDQLNNKLLGLQLGADDYITKPFDSRELILRIRAISRRINKAKALVKNEIKNKKNDIIEKGLIKIIIPERRVFIEGKEAIFTHIEFEIILLMIQNPYKVFTREELLDKIWGYSFAGNTRAVDIHIKRIRKKLSGNEDVIKTIYGVGYRLEV
>CP017253.2|AOR22525.1|356240_357665_+|sensor-histidine-kinase
MKLGIKGKIVIMNIFILIIAILSIYVVTIYTLYSRVINNSIDMLKKESYTSQAFIMNYLDKEDDFHAENVLNEMSPFIATYLSNGCKFRVQIYNSSSLIGDSDSYPNINKDDDVVTALKGNKSYIIRKMEDSSYILFSSPIYYSDGTIGCVRYVYDLDNESTIITNTILSMVLFAIVAIIFSSIMSNSFSNRIVRPIVSLKNIARKVSFGDFSKKISINSGDEIEELSNSFNIMSNNIEIMIDNLKEEKETQKRFLDNVTHEFKTPLSAILGYSDLLLRVREKKDVEKCVKYIVKSSNRLLKLVEQLLDLSRLNKNEIDIKNEIVDIKSIIESAAMMLNPRIHKFGINLNMDLVSKNIYADKEKTEQVVLNVLDNAIKYSECTEINIYMKYNECYVIIFISDNGQGIPKEDLKNVFENFYTAHKVLQKKYGGSGLGLSICKEFMEKQSGKIEISSLNGTTVKLSFKHAIKKEIK

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Crispr_ID: CP017253_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP017253_3

947171-947258

Orphan

Consensus_repeat	Method
AAGCTACTCCTATAAAATAAATATA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP017253_3

>merge|CP017253|3|947171-947258|CRISPRCasFinder
AAGCTACTCCTATAAAATAAATATATTATTAATAATATATTTCTAGGGGGAGTCTCAATATAAAAGCCACTCCTATAAAATAAATATA

>CP017253|3|2|947171-947258|CRISPRCasFinder
AAGCTACTCCTATAAAATAAATATA	TTATTAATAATATATTTCTAGGGGGAGTCTCAATATAA
AAGCCACTCCTATAAAATAAATATA

Protein	Signature genes	Signature genes Name	Protein_function
CP017253.2\|AOR23033.1\|950638_951376_+\|phosphatase	unknown	unknown	gnl\|CDD\|236429
CP017253.2\|AOR23038.1\|954947_956012_-\|spermidine/putrescine-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270308
CP017253.2\|AOR23022.1\|935935_936700_+\|N-acetylmuramoyl-L-alanine-amidase	unknown	unknown	gnl\|CDD\|119407
CP017253.2\|AOR23034.1\|951388_951823_+\|N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
CP017253.2\|AOR23024.1\|937650_938697_+\|exopolysaccharide-biosynthesis-protein	unknown	unknown	gnl\|CDD\|378342
CP017253.2\|AOR23032.1\|949578_950367_-\|HAD-family-phosphatase	unknown	unknown	gnl\|CDD\|223635
CP017253.2\|AOR23023.1\|936867_937458_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|368199
CP017253.2\|AOR23021.1\|935639_935870_+\|hypothetical-protein	unknown	unknown	unknown
CP017253.2\|AOR23026.1\|939904_941014_+\|sugar-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|236947
CP017253.2\|AOR23037.1\|954326_954740_+\|nucleoside-diphosphate-kinase	unknown	unknown	gnl\|CDD\|366034
CP017253.2\|AOR23035.1\|952257_953685_+\|sodium:alanine-symporter-family-protein	unknown	unknown	gnl\|CDD\|224040
CP017253.2\|AOR23020.1\|935423_935624_+\|UviB-like-protein	unknown	unknown	gnl\|CDD\|378518
CP017253.2\|AOR23030.1\|947347_948211_-\|50S-ribosomal-protein-L11-methyltransferase	unknown	unknown	gnl\|CDD\|234786
CP017253.2\|AOR23031.1\|948417_949377_+\|hydroxyacid-dehydrogenase	unknown	unknown	gnl\|CDD\|181414
CP017253.2\|AOR23028.1\|942136_943153_+\|LacI-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224525
CP017253.2\|AOR23025.1\|938715_939753_+\|hypothetical-protein	unknown	unknown	unknown
CP017253.2\|AOR23039.1\|955998_956799_-\|spermidine/putrescine-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224098
CP017253.2\|AOR23029.1\|943343_944837_+\|4-alpha-glucanotransferase	unknown	unknown	gnl\|CDD\|237738
CP017253.2\|AOR23027.1\|941036_941978_+\|PucR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225306
CP017253.2\|AOR23036.1\|953891_954164_-\|acylphosphatase	unknown	unknown	gnl\|CDD\|376373

Protein	Function_ID	Function_description	E-value
CP017253.2\|AOR23038.1\|954947_956012_-\|spermidine/putrescine-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270308	cd13590, PBP2_PotD_PotF_like, The periplasmic-binding component of ABC transporters involved in uptake of polyamines; possess the type 2 periplasmic binding fold. This family represents the periplasmic substrate-binding domain that functions as the primary high-affinity receptors of ABC-type polyamine transport systems. Polyamine transport plays an essential role in the regulation of intracellular polyamine levels which are known to be elevated in rapidly proliferating cells and tumors. Natural polyamines are putrescine, spermindine, and spermine. They are polycations that play multiple roles in cell growth, survival and proliferation, and plant stress and disease resistance. They can interact with negatively charged molecules, such as nucleic acids, to modulate their functions. Members of this family belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	1.00622e-136
CP017253.2\|AOR23022.1\|935935_936700_+\|N-acetylmuramoyl-L-alanine-amidase	gnl\|CDD\|119407	cd02696, MurNAc-LAA, N-acetylmuramoyl-L-alanine amidase or MurNAc-LAA (also known as peptidoglycan aminohydrolase, NAMLA amidase, NAMLAA, Amidase 3, and peptidoglycan amidase; EC 3.5.1.28) is an autolysin that hydrolyzes the amide bond between N-acetylmuramoyl and L-amino acids in certain cell wall glycopeptides. These proteins are Zn-dependent peptidases with highly conserved residues involved in cation co-ordination. MurNAc-LAA in this family is one of several peptidoglycan hydrolases (PGHs) found in bacterial and bacteriophage or prophage genomes that are involved in the degradation of the peptidoglycan. In Escherichia coli, there are five MurNAc-LAAs present: AmiA, AmiB, AmiC and AmiD that are periplasmic, and AmpD that is cytoplasmic. Three of these (AmiA, AmiB and AmiC) belong to this family, the other two (AmiD and AmpD) do not. E. coli AmiA, AmiB and AmiC play an important role in cleaving the septum to release daughter cells after cell division. In general, bacterial MurNAc-LAAs are members of the bacterial autolytic system and carry a signal peptide in their N-termini that allows their transport across the cytoplasmic membrane. However, the bacteriophage MurNAc-LAAs are endolysins since these phage-encoded enzymes break down bacterial peptidoglycan at the terminal stage of the phage reproduction cycle. As opposed to autolysins, almost all endolysins have no signal peptides and their translocation through the cytoplasmic membrane is thought to proceed with the help of phage-encoded holin proteins. The amidase catalytic module is fused to another functional module (cell wall binding module or CWBM) either at the N- or C-terminus, which is responsible for high affinity binding of the protein to the cell wall.	1.24811e-32
CP017253.2\|AOR23034.1\|951388_951823_+\|N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	5.64619e-08
CP017253.2\|AOR23020.1\|935423_935624_+\|UviB-like-protein	gnl\|CDD\|378518	pfam10960, Holin_BhlA, BhlA holin family. The Phage_holin_BhlA family is a family of holin-like proteins from both bacteriophages and bacterial chromosomes. In bacteriophage, holins are small membrane proteins that accumulate and oligomerize to form non-specific lesions in the cytoplasmic membrane allowing the release of the second protein, endolysins, to access the peptidoglycan. Most holins share common structural features: two or three transmembrane domains separated by a beta-turn, a short hydrophilic N-terminus, a highly charged C-terminus and a dual translational start motif. The BhlA holin of Bacillus is found to be toxic to the host cell where the site of action of is on the cell membrane and causes bacterial death by cell membrane disruption.	1.26428e-12
CP017253.2\|AOR23024.1\|937650_938697_+\|exopolysaccharide-biosynthesis-protein	gnl\|CDD\|378342	pfam09992, NAGPA, Phosphodiester glycosidase. This is a family conserved from bacteria to humans. The structure of a member from Bacteroides has been crystallized and modelled onto the luminal region of the human member of the family, the transmembrane glycoprotein N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase. There is some conservation of potentially functional residues, implying that in the bacterial members this family acts in some way as a phosphodiester glycosidase. The human protein is also present, so the eukaryotic members are likely to be catalyzing the second step in the formation of the mannose 6-phosphate targeting signal on lysosomal enzyme oligosaccharides.	3.15831e-49
CP017253.2\|AOR23032.1\|949578_950367_-\|HAD-family-phosphatase	gnl\|CDD\|223635	COG0561, Cof, Predicted hydrolases of the HAD superfamily [General function prediction only].	6.45157e-60
CP017253.2\|AOR23023.1\|936867_937458_+\|hypothetical-protein	gnl\|CDD\|368199	pfam04931, DNA_pol_phi, DNA polymerase phi. This family includes the fifth essential DNA polymerase in yeast EC:2.7.7.7. Pol5p is localized exclusively to the nucleolus and binds near or at the enhancer region of rRNA-encoding DNA repeating units.	0.00153685
CP017253.2\|AOR23026.1\|939904_941014_+\|sugar-ABC-transporter-ATP-binding-protein	gnl\|CDD\|236947	PRK11650, ugpC, sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC.	0
CP017253.2\|AOR23037.1\|954326_954740_+\|nucleoside-diphosphate-kinase	gnl\|CDD\|366034	pfam00334, NDK, Nucleoside diphosphate kinase.	7.87441e-69
CP017253.2\|AOR23035.1\|952257_953685_+\|sodium:alanine-symporter-family-protein	gnl\|CDD\|224040	COG1115, AlsT, Na+/alanine symporter [Amino acid transport and metabolism].	0
CP017253.2\|AOR23031.1\|948417_949377_+\|hydroxyacid-dehydrogenase	gnl\|CDD\|181414	PRK08410, PRK08410, D-2-hydroxyacid dehydrogenase.	0
CP017253.2\|AOR23030.1\|947347_948211_-\|50S-ribosomal-protein-L11-methyltransferase	gnl\|CDD\|234786	PRK00517, prmA, 50S ribosomal protein L11 methyltransferase.	3.05079e-26
CP017253.2\|AOR23033.1\|950638_951376_+\|phosphatase	gnl\|CDD\|236429	PRK09248, PRK09248, putative hydrolase; Validated.	7.07755e-139
CP017253.2\|AOR23028.1\|942136_943153_+\|LacI-family-transcriptional-regulator	gnl\|CDD\|224525	COG1609, PurR, Transcriptional regulators [Transcription].	2.79364e-102
CP017253.2\|AOR23039.1\|955998_956799_-\|spermidine/putrescine-ABC-transporter-permease	gnl\|CDD\|224098	COG1177, PotC, ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism].	1.29235e-84
CP017253.2\|AOR23029.1\|943343_944837_+\|4-alpha-glucanotransferase	gnl\|CDD\|237738	PRK14508, PRK14508, 4-alpha-glucanotransferase; Provisional.	0
CP017253.2\|AOR23027.1\|941036_941978_+\|PucR-family-transcriptional-regulator	gnl\|CDD\|225306	COG2508, COG2508, Regulator of polyketide synthase expression [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism].	1.03725e-15
CP017253.2\|AOR23036.1\|953891_954164_-\|acylphosphatase	gnl\|CDD\|376373	pfam00708, Acylphosphatase, Acylphosphatase.	7.25708e-23

>CP017253.2|AOR23029.1|943343_944837_+|4-alpha-glucanotransferase
MRRSSGIIMHIASLPGKFGIGTFGKEAYEFADFLKKAHQKYWQILPIGPTSYGDSPYQSFSAFAGNPYFIDFKLLEEDELLEKKDYANINFGKDEEDIDYGLIFIEKMKVLRKAYERFKLNIPKDLKEFEEKNLWLDDYSLYMALKSKFELKSWQKWDIDIKLRKKHILDKYKQELKDEINYWKFIQYKFFEQWTNLKKYVNDLGIEIIGDIPIYVAEDSADVWANPEAFLLDEKTLLPLKVSGCPPDNFALTGQLWGNPIYNWDYIDKTNYKWWIERMKQSSKLYDVIRIDHFRGFESYWSIPYGDPTAENGEWVKGPGMKLFNAIKKELGDIKIIAEDLGFLTEEVAKFREESGFPGMRVLQFAFSEDANNRDLPHNYDENCIAYTGTHDNNTFRGWFEKTGTKEEIEYAIKYLGLNKEEEYNWGFIRGVWGSKAYLSIALMQDFLNLGNETRINVPSTLGDNWRWRVKKGVFTKELAEKIYEITKIYGRCEDDE
>CP017253.2|AOR23028.1|942136_943153_+|LacI-family-transcriptional-regulator
MNIADIARIAGVGVSTVSRVINNHPDVKETTREKIWEIIKQNNYIPNNSARILKQNNTKNIGVLVKGVFNPFFSQMINVIGNIIDKSGYTMILEQNDYNFYQDVENLIGFVKEKKLQGVICLGGNFIEIKEDSFAGIGTPIVLTSVNTISNQGKKHYSSIGIDNIKVSYDTTQYLIKKGHKKIALILGDENDLGISWWRLKGYRNALKDNNIEIDDELELIGDYSCEKAYKQTMNLIKNRKEVTAIFALSDIMAMGVAKAVVDSGLKIGEDISIIGFDGMDESKYYNPGITTVNQPKKLMAERSIELLFSLINGTEENKQILLDTQLIERESCKDLSM
>CP017253.2|AOR23027.1|941036_941978_+|PucR-family-transcriptional-regulator
MYGLVEYLNELYKNCEIPFEVCIDDKMIFRTNPFLYTGKELIETRFSINNKSFIVKTFINFKDSLKLIKFCIVSKLKNEHDMRENTIISLLKNEHISSDKLHDIMFDLNEVYLITINLDEKINETIEVLKDIYTDTEVSILEYNEYIILLGIFEDIEDHIDSINETIHNNLYKRCYISYYEVENYNNIYSLYKEGIYKIYLAKKYNISNRIFNERSLLFESIVDSLGEEEKVKILSKFNEGFNRLDNDIIDTIEVFLNCDLNLSESAKNLYVHRNTLIYRLDKIKKYTSYDIRNFNEAILFKIAFFIWKERNA
>CP017253.2|AOR23026.1|939904_941014_+|sugar-ABC-transporter-ATP-binding-protein
MADLSLRHIYKIYPGDVTAVNDFNLEIEDKEFIVFVGPSGCGKSTTLRMIAGLEEISKGELYIDEKLVNDVEPKERDIAMVFQNYALYPHMSVYENMAFSLKLKKVSKEEIDKKVKEAAQILGIEHLLSRKPKALSGGQRQRVALGRAIVRNPKVFLMDEPLSNLDAKLRVQMRTEISKLYNKLQTTFIYVTHDQVEAMTMGTRIVVMKDGIIQQVDTPQNIYNNPVNIFVAGFIGSPQMNFVDGKIIEKEGNLYCHFAENNILLPEQNAKELKDKGYVNKEVTFGMRPEHLDDNMEVIKSNPSSIINGKIEVVELMGAESYIYFVASNNNMTARVNGTTNAKNGDSIKLYVESEKIHVFDKESELRII
>CP017253.2|AOR23025.1|938715_939753_+|hypothetical-protein
MKILKKVLIFSVIALIIQQSIFLYIENIYLSSNMNIKIEKSDDEEVAKNEQKEIVIKENLEDLKVSSNGRYVAGLEDGRLTILDSDENKYKDVKNNVNSNIVFYKWVTNSDRIIAIQKIKERGRCYFEPVAFNAKSGEQIELSDFDLNKLRVRIESSEDKVEDIPFSTGTHSLYIKIKKSNGKSDLYYANTMNQLEKKRSNKQIGNIVIPTTCANAIMEMGTQVTILDRPDNLLIPNTKNPKLLGADINDNVYFASGIDNKVMKIYYAVSSNNYKDWKEIKLDNPTNKENVLVDYSGKIYINNKEKNSVTELISKKTINYKGSLIQTYSKGVISKDKDKIIKNEI
>CP017253.2|AOR23024.1|937650_938697_+|exopolysaccharide-biosynthesis-protein
MNKQVKKKSTRKNMRHNKKKEISISIFMGVLYIIAFLIVTTPLVLIYGPYDKTKKILISTVLATRHAYLVNDFIPQKTLDKILEKDKIKEESVPVNTSIDLNKIDVKYDSGNEITKYDIHTDRYDGYMLEIQNPHKVKVAMTKYLGKLGQKTSEMAEEHNAIAAINGGAFSDTSSDGVIRAGTGGKPEGFVISNGKVIYPTIKCDEHFIANVIAFTKKGQLIVGDHTLAELKKLDVQEAMCFRRPNIIINGIRQHKKEDYIEGMNPRTAVGQKEDGTVLFLVLDGRKISKPGATLYEVQEIMKNRGAINAGMLDGGYSTTMYYKGDVINSPNAWDGERTVATAFYVEQ
>CP017253.2|AOR23023.1|936867_937458_+|hypothetical-protein
MNNMYYKEETDTNEEVTTEENVTEESNVINEEEAKNSDTDNETVDEIDNEIDMIAEEDNEDDNEEEDKKRWHFGKPVDLSANCSLEMHINPENKMIYVCPGKAQYFIASSSKCCGPIRVKYLSHNCNRRCKKICGCLGTYFVFNSGIVIIPKKRLRPGAIDVLPFLAYDGCNYYKFEAIFTYSPCECCKCCKGSRR
>CP017253.2|AOR23022.1|935935_936700_+|N-acetylmuramoyl-L-alanine-amidase
MKIGLRAGHSPNCLGAIGIVNEYEQMKKYYEAVKSVLEQYGHTVIDCNSNASTENAELSEGVNKANSNNVDFFASLHMNYYNGQAHGTEVLVSSTSSKAYPYAQRLVQNFSELGFYNRGVKFRILYEMNHVKAPNIISEICFCDSKKDIDIYNKYSWEQLAHVFCNAIDSNIPKTVNSRTTGYVVTNYLPNGYKGDNSFIGVDLEYVLSYFHGVRCYAKADSKGIWIETQVLPISKCEELKAQLGTWFYTLKSF
>CP017253.2|AOR23021.1|935639_935870_+|hypothetical-protein
MKGKELIERLKNSGTIITLVSLVILVLTTNGVLVDNEKVMTTVQAICSIGVILGILNNPETDGVDLPFVSNKENKK
>CP017253.2|AOR23020.1|935423_935624_+|UviB-like-protein
MDELMKMALSQGLGYALFVFLLLYVLKTTGNRENKYQNLLDTLAEKFNVVEDIKEDVKEIKIKIEK
>CP017253.2|AOR23030.1|947347_948211_-|50S-ribosomal-protein-L11-methyltransferase
MFIITYKIPYENIDISIEKLQFNDIFNVFYESPLEITTDEFGYGYIEKDDVIIDFKVAFDGKESDLEEFTNKVNSIFQLTPDNTMEENYNYEETHFPAIHIDDKWVIASPEEDFPGKQKINFISQGAFGTGMHETTQNILKYILSKDFTNLDVLDIGTGSGILSLATSIKNARRICALDIRDVHEEIAFNSSLNEITNIETFVGNALNNEVVIDGTFDWIYINIGGEETEMFIDYINDHIKENGKLLVSGLVEWSFDSVKEKIESKGYIMEEKIQTNEWCTAIFNRK
>CP017253.2|AOR23031.1|948417_949377_+|hydroxyacid-dehydrogenase
MKEIVVLDGKTLGNIDFSKLNEFGNVTYYDLTSSNEVEDRIKNANIVLTNKVVLNENNLKNAKNLELICEMATGFNNIDIEYAKKNNIAVTNVAGYSTNTVAQHTFAMALNLCDKISYFDNYVKSKEYSTSNIFTNVDEVYRDIDGKVWGIIGLGAIGKRVAKIAEAFGCKVIYYSTSGKNSNSDYKRVEFEELLEKSDIISIHAPLNESTNGLMNYDVFKKMKKESILINMGRGPIVVDSDLARAIDENLIGGAGLDVFEVEPIPENNPLVNVKNKEKLVLSPHIAWASEEARNRLFNDLLENIRAFNKGEKRNRVEC
>CP017253.2|AOR23032.1|949578_950367_-|HAD-family-phosphatase
MIKLIATDMDGTLLDEKGHLPESFIEVLDLITEKDVNLVIASGRPYATLQTNFGPVANRLSYITDNGALVYHNNELIFKDVIDKNLVQDIIKEAKKIKNTAIVLCGIECAYIENCSEEYLKEIQKYYVKYEIVNDISKIKDDIIKVTLCDLNHAAKNSNPIINPLFGNDLNVVVAGELWLDIMNKTVNKGIALRKIMEENNIKKEETMAFGDYYNDIEMLNEAEYSFVMKNAPEDMKQHGKYIAESNEDYGVLGAIMEHVVL
>CP017253.2|AOR23033.1|950638_951376_+|phosphatase
MKYALDVHTHTLVSGHAYSTLMENAKAASEKGIKVLGTTEHGITMPNAPHIWYFHNYKVLPREMYGVTMLYGVEANIRDYEGNLDMDDSSLNKVDIVIGSIHPQPGVYTVGTKEENTNAFINAIKSGKIDIIGHIGNPQVPINFEKVVKCAFENDVLVEINNSSFTTSRIGSKENCKEVALLCKEYGAKLVINSDAHFCTKIGEFTKAIELLKEIDFPDELIINSKPDDLLLRLKKKGKLNDLEI
>CP017253.2|AOR23034.1|951388_951823_+|N-acetyltransferase
MEILKINESDIKECAKIFIEAFNEEPWNDKWTIENAYRRLQDIYKSPNFVGIKYVENNKIYGALFGNCEEWFKGRHFNIKEVFVSKKIQGKSIGSKLIEGIQNEVKNLGVDFMFLSTQSNNLKKFYLKHNFEETNSLCIMSKKI
>CP017253.2|AOR23035.1|952257_953685_+|sodium:alanine-symporter-family-protein
MLLSNLLLSTAGVQSFLKTIDSIIWGPPLLILLVGTGLYLTFRLKVLQIFRLPMALKFVFGKDDELKNEDAKGDVSSFAALCTALSATIGTGNIVGVATAIKAGGPGALLWMWLAAFFGMATKYAEGVLAIKYREIDENGEMCGGPMYYIQNGLGLKWLAKLFALFGVGVAFFGIGTFGQVNSIAAAASNFNIPLYATAIVTTTLVALVTLGGIKRISKVSETFVPFMAVAYIIGAALVLIFNHTAVPGAIRLVFESAFNTEAIGGGVLGITVTMAIRNGIARGVFSNESGLGSAPIAAAAAKTNLPVKQGLISMTGTFFDTIIVCTMTGLAIVITSGSTGVFEVGATIEGAGLTSAAFEIGLPIAFLGKYIVNIGLIFFAFTTILGWNYYGEKCIQYLFGTKLIMPYRIIYIMLVAIGPFLPLELIFIIADIVNGCMAFPNLIGLIGLRKVIIQETEEFFEEMKEKDSMEEAVV
>CP017253.2|AOR23036.1|953891_954164_-|acylphosphatase
MIRYSIKVSGIVQEVGFRYFSQLNATSLSLTGYAKNLYSGEVIIEVQGIQENIDKFIDTILTGNKFSKVYDIELKKIEPIYDEKKFKIKY
>CP017253.2|AOR23037.1|954326_954740_+|nucleoside-diphosphate-kinase
MIEKTMVLIKPDGVKRNIIGNIISCYEANGLKVLEIKMMKATRKIAEQHYSQHKGKDFYEELIEFITSSPLCAIILTGEDAISKVRKINGATSPDDAEEGTIRHRYARSKTENCVHASDNVESAEAELKLWFPEVNL
>CP017253.2|AOR23038.1|954947_956012_-|spermidine/putrescine-ABC-transporter-substrate-binding-protein
MRKFKLFSTLALASLLTLSLFSGCSNNNAGKNGIVYFYNCGDYIDEDLLSKFEDETGINVQYSTYDTNEIMYQKLKSTPGSYDLVIPSDYMIEKMIQENMVEELDFNTIPNYKYIDDSYKNLSYDKNNKYSVPYMWGTIGIIYNPDKVKEPVKSWDILWNEKYNNKQLIMFDSMRDTLAIGLKKLGYSINSTNSDEINAATEELVKQKQNLSPLYYVDEVKDKMIIGEAVMATVWSGDAAYIRLENPKLKYVIPEEGSNKWFDGMVIPKDAPNKENAEKLINFLCDPENAKQNVDYIGYSTPNKAAYEMLEDNIKNDKGIYPPKDVLDKCEIFVDLGDSLKLYDDAWMKIKTAN
>CP017253.2|AOR23039.1|955998_956799_-|spermidine/putrescine-ABC-transporter-permease
MVNRLESFIKKFYLAIIFLFLYTPIITLMVFSFNKSKTMGRWTGLTFKWYKQLFNNDRLMSALYYTLLIAIIASIIATIIGTISAIGISKMRGRKKSFVLNVNYLPVLNPDIVTGIALMCMFIFINLKFGFITMLLSHITFDIPYVILSVLPKLKQIPENTVEAAEDLGATPLYAIRKVILPQIKPGIISGFLMAFTMSIDDFVISFFTTGPGVTNLSIEIYSMARRGIKPEINALSTLMFLTVLTLLIIVNKKQNFMRGEQFEKI

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
CP017253_1	1.1\|112594\|18\|CP017253\|CRT	112594-112611	18	CP017253.2	943150-943167	2	0.889
CP017253_1	1.1\|112594\|18\|CP017253\|CRT	112594-112611	18	CP017253.2	2083577-2083594	2	0.889

1. spacer 1.1|112594|18|CP017253|CRT matches to position: 943150-943167, mismatch: 2, identity: 0.889

gtgaaaagaaatgtgaag	CRISPR spacer
gtgaaaataaatgagaag	Protospacer
******* ***** ****

2. spacer 1.1|112594|18|CP017253|CRT matches to position: 2083577-2083594, mismatch: 2, identity: 0.889

gtgaaaagaaatgtgaag	CRISPR spacer
gtaaaaagaaatatgaag	Protospacer
**.*********.*****

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP017253_1	1.2\|112630\|30\|CP017253\|CRT	112630-112659	30	NZ_CP039285	Leptospira interrogans strain FMAS_AW1 plasmid pLiSL2, complete sequence	49569-49598	9	0.7
CP017253_1	1.2\|112630\|30\|CP017253\|CRT	112630-112659	30	NZ_CP006725	Leptospira interrogans serovar Linhai str. 56609 plasmid lcp1, complete sequence	30712-30741	9	0.7

1. spacer 1.2|112630|30|CP017253|CRT matches to NZ_CP039285 (Leptospira interrogans strain FMAS_AW1 plasmid pLiSL2, complete sequence) position: , mismatch: 9, identity: 0.7

gtgaagagaaatgcaaagacaaatgtgaag	CRISPR spacer
acgaagagaaatccaaagacaaacgaatta	Protospacer
..********** **********.* .  .

2. spacer 1.2|112630|30|CP017253|CRT matches to NZ_CP006725 (Leptospira interrogans serovar Linhai str. 56609 plasmid lcp1, complete sequence) position: , mismatch: 9, identity: 0.7

gtgaagagaaatgcaaagacaaatgtgaag	CRISPR spacer
acgaagagaaatccaaagacaaacgaatta	Protospacer
..********** **********.* .  .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

414669 : 483487

Clostridium_phage(20.0%)

tRNA,protease,coat,transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AOR22564.1\|414669_415689_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	2.6e-62	40.7
AOR22565.1\|415691_416696_+	alpha/beta hydrolase	NA	NA	NA	NA
AOR22566.1\|416858_418040_+\|protease	serine protease	A0A1B1IT49	uncultured_Mediterranean_phage	7.8e-18	29.3
AOR22567.1\|418380_418788_+	carboxypeptidase regulatory-like domain-containing protein	NA	NA	NA	NA
AOR22568.1\|419006_420143_+	sugar ABC transporter substrate-binding protein	NA	NA	NA	NA
AOR22569.1\|420145_421267_-	glycosyltransferase family 1 protein	B6EFC4	Stygiolobus_rod-shaped_virus	1.1e-05	32.3
AOR22570.1\|421413_422430_+\|coat	CotS family spore coat protein	NA	NA	NA	NA
AOR22571.1\|422404_423175_+\|coat	spore coat protein	NA	NA	NA	NA
AOR22572.1\|423265_424309_+\|coat	CotS family spore coat protein	NA	NA	NA	NA
AOR22573.1\|424496_425639_-	glycosyltransferase family 1 protein	Q8V9P0	Sulfolobus_islandicus_rod-shaped_virus	1.1e-05	26.8
AOR22574.1\|425748_426750_+\|coat	CotS family spore coat protein	NA	NA	NA	NA
AOR22575.1\|427167_428031_+	sporulation peptidase YabG	NA	NA	NA	NA
AOR22576.1\|428219_428462_+	hypothetical protein	NA	NA	NA	NA
AOR22577.1\|428873_430436_+	peptidoglycan-binding protein	NA	NA	NA	NA
AOR22578.1\|430563_431409_+	cyanophycinase	NA	NA	NA	NA
AOR22579.1\|431380_433999_+	cyanophycin synthetase	NA	NA	NA	NA
AOR22580.1\|434162_435005_+	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase	NA	NA	NA	NA
AOR22581.1\|435067_435703_+	stage II sporulation protein R	NA	NA	NA	NA
AOR22582.1\|435738_436731_+	DUF814 domain-containing protein	NA	NA	NA	NA
AOR22583.1\|436791_437211_+	DUF1934 domain-containing protein	NA	NA	NA	NA
AOR22584.1\|437318_437618_+	hypothetical protein	NA	NA	NA	NA
AOR22585.1\|437808_439404_+	CTP synthase	A0A1J0FA14	Only_Syngen_Nebraska_virus	8.0e-151	50.9
AOR22586.1\|439774_441238_+	transcription termination factor Rho	NA	NA	NA	NA
AOR22587.1\|441285_442389_-	UDP-N-acetylglucosamine--LPS N-acetylglucosamine transferase	NA	NA	NA	NA
AOR22588.1\|442534_442744_-	50S ribosomal protein L31	NA	NA	NA	NA
AOR22589.1\|442956_443544_+	thymidine kinase	A0A249XXF6	Clostridium_phage	2.3e-55	53.2
AOR22592.1\|445578_446661_+	peptide chain release factor 1	NA	NA	NA	NA
AOR22593.2\|446799_447327_+	hypothetical protein	NA	NA	NA	NA
AOR22594.1\|447345_448395_+	L-threonylcarbamoyladenylate synthase	A0A291ATS8	Pandoravirus	2.2e-48	39.3
AOR22595.1\|448516_448966_+	ribose 5-phosphate isomerase B	NA	NA	NA	NA
AOR22596.1\|449011_449641_+	uracil phosphoribosyltransferase	NA	NA	NA	NA
AOR22597.1\|449752_450247_+	cytidine deaminase	A0A2H5BMD7	Streptomyces_phage	1.5e-15	36.8
AOR22598.1\|450531_451680_+	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	A0A1V0SAG5	Catovirus	4.0e-27	27.2
AOR22599.1\|451801_452983_+	acetyl-CoA C-acetyltransferase	NA	NA	NA	NA
AOR22600.1\|453831_454209_+	hypothetical protein	NA	NA	NA	NA
AOR22601.1\|454211_454892_+	F0F1 ATP synthase subunit A	NA	NA	NA	NA
AOR22602.1\|454920_455136_+	ATP synthase F0 subunit C	NA	NA	NA	NA
AOR22603.1\|455188_455668_+	ATP synthase F0 subunit B	NA	NA	NA	NA
AOR22605.1\|456219_457734_+	F0F1 ATP synthase subunit alpha	NA	NA	NA	NA
AOR22606.1\|457774_458626_+	F0F1 ATP synthase subunit gamma	NA	NA	NA	NA
AOR22607.1\|458640_460032_+	F0F1 ATP synthase subunit beta	NA	NA	NA	NA
AOR22608.1\|460044_460449_+	ATP synthase F1 subunit epsilon	NA	NA	NA	NA
AOR22609.1\|460605_461244_+	hypothetical protein	NA	NA	NA	NA
AOR22610.1\|461302_462565_+	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	NA	NA	NA	NA
AOR22611.1\|462800_463838_+	stage II sporulation protein D	Q2XU88	Pseudomonas_phage	1.1e-39	37.5
AOR22612.1\|464001_464727_+	M23 family peptidase	NA	NA	NA	NA
AOR22613.1\|464817_465072_+	sporulation transcriptional regulator SpoIIID	M9Q261	Clostridium_phage	8.2e-18	58.7
AOR22614.1\|465151_466186_+	rod shape-determining protein	NA	NA	NA	NA
AOR22615.1\|466233_466755_-	DUF1256 domain-containing protein	A0A0A8WIQ6	Clostridium_phage	2.1e-28	39.9
AOR22616.1\|466869_467277_+	hypothetical protein	NA	NA	NA	NA
AOR22617.1\|468667_469843_+	methionine adenosyltransferase	A0A2H4PQS6	Staphylococcus_phage	6.7e-155	68.6
AOR22618.1\|470316_472536_+	ATP-dependent RecD-like DNA helicase	A0A218KCE8	Bacillus_phage	9.0e-76	33.1
AOR22619.2\|472571_473585_+	hypothetical protein	NA	NA	NA	NA
AOR22620.1\|474619_475153_+	ribosomal subunit interface protein	NA	NA	NA	NA
AOR22621.1\|475592_478103_+	preprotein translocase subunit SecA	NA	NA	NA	NA
AOR22622.2\|478531_479566_+	peptide chain release factor 2	W8EDB3	Pseudomonas_phage	3.0e-05	37.9
AOR22623.1\|479763_481131_-	peptidase	NA	NA	NA	NA
AOR22624.1\|481319_481664_+	ribonuclease G	NA	NA	NA	NA
AOR22625.1\|481718_482051_-	hypothetical protein	NA	NA	NA	NA
AOR22626.1\|482284_483487_+\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_2

556931 : 604909

Erysipelothrix_phage(25.81%)

capsid,head,terminase,protease,portal,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AOR22686.1\|556931_557318_+\|protease	cysteine protease	NA	NA	NA	NA
AOR22687.1\|557322_557622_+	50S ribosomal protein L27	NA	NA	NA	NA
AOR22688.1\|557882_559169_+	GTPase ObgE	NA	NA	NA	NA
AOR22689.1\|559189_559486_+	RNA-binding protein	NA	NA	NA	NA
AOR22690.1\|559848_560451_+	nicotinic acid mononucleotide adenylyltransferase	G3MA22	Bacillus_virus	7.7e-14	28.1
AOR22691.1\|560455_561022_+	phosphohydrolase	NA	NA	NA	NA
AOR22692.1\|561256_562531_+	LytR family transcriptional regulator	NA	NA	NA	NA
AOR22693.1\|562623_563520_+	pseudouridine synthase	NA	NA	NA	NA
AOR22694.1\|563533_564856_-	D-alanyl-D-alanine carboxypeptidase	A0A1P8VVG5	Erythrobacter_phage	1.0e-05	23.0
AOR22695.2\|565152_565701_+	competence protein ComEA	NA	NA	NA	NA
AOR22696.1\|565902_566604_+	hypothetical protein	NA	NA	NA	NA
AOR22697.1\|566621_567002_+	RDD family protein	NA	NA	NA	NA
AOR22698.1\|567018_568374_+	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	A0A2K5B251	Erysipelothrix_phage	1.1e-57	32.2
AOR22699.1\|568655_570650_+	SAM-dependent methyltransferase	B3GAM1	uncultured_virus	1.1e-16	41.9
AOR22700.1\|570694_572086_+	restriction endonuclease subunit S	B3GAM1	uncultured_virus	4.7e-14	28.2
AOR22701.1\|572347_574738_+	hypothetical protein	NA	NA	NA	NA
AOR22702.1\|574786_575518_-	hypothetical protein	NA	NA	NA	NA
AOR22703.1\|575930_576131_+	hypothetical protein	NA	NA	NA	NA
AOR22704.1\|576387_576711_+	HTH domain-containing protein	NA	NA	NA	NA
AOR22705.1\|576730_576982_+	hypothetical protein	NA	NA	NA	NA
AOR22706.1\|577010_577355_+	hypothetical protein	NA	NA	NA	NA
AOR22707.1\|577351_578488_+	DUF2800 domain-containing protein	A0A2K5B2A8	Erysipelothrix_phage	3.9e-115	56.3
AOR22708.1\|578535_579075_+	DUF2815 domain-containing protein	A0A0A7RVM4	Clostridium_phage	2.3e-57	64.7
AOR22709.1\|579144_581100_+	hypothetical protein	A0A2K5B2B0	Erysipelothrix_phage	2.4e-218	57.9
AOR22710.1\|581168_583538_+	hypothetical protein	A0A1W6JQ82	Corynebacterium_phage	5.4e-212	48.6
AOR22711.2\|583816_584122_+	nuclease	A0A2K5B272	Erysipelothrix_phage	4.7e-28	66.7
AOR22712.1\|584096_585476_+	ATP-dependent helicase	S5MA26	Brevibacillus_phage	7.6e-150	59.2
AOR22713.1\|585477_585900_+	DUF1492 domain-containing protein	NA	NA	NA	NA
AOR22714.1\|586110_586473_+	HNH endonuclease	M1PLL8	Streptococcus_phage	4.0e-34	53.8
AOR22715.1\|586532_586775_+	prevent-host-death protein	E4ZFM1	Streptococcus_phage	7.6e-21	58.8
AOR22716.1\|586771_587152_+	type II toxin-antitoxin system death-on-curing family toxin	D0R0D2	Streptococcus_phage	2.0e-31	53.3
AOR22717.1\|587371_587812_+	RNA polymerase subunit sigma-70	Q6DMV1	Streptococcus_phage	1.7e-18	37.3
AOR22718.1\|587801_589025_+	DNA modification methylase	A0A2I4R670	Erysipelothrix_phage	8.0e-143	59.4
AOR22719.1\|589093_589405_+	hypothetical protein	A0A2K5B282	Erysipelothrix_phage	5.7e-29	60.8
AOR22720.1\|589583_590489_+	amidoligase	A0A1B1IUD7	uncultured_Mediterranean_phage	2.8e-60	41.9
AOR22721.1\|590557_590767_+	gamma-glutamylcyclotransferase	NA	NA	NA	NA
AOR22722.1\|590848_591331_+\|terminase	terminase	Q6DMU4	Streptococcus_phage	1.2e-62	75.0
AOR22723.1\|591323_592871_+\|terminase	terminase	A0A2K5B285	Erysipelothrix_phage	4.7e-233	73.3
AOR22724.1\|592876_593515_-	hypothetical protein	NA	NA	NA	NA
AOR22725.1\|593721_594171_+	hypothetical protein	NA	NA	NA	NA
AOR24893.1\|594314_595562_+\|portal	phage portal protein	Q6DMU2	Streptococcus_phage	8.9e-182	73.8
AOR22726.1\|595558_596245_+	peptidase	Q6DMU1	Streptococcus_phage	6.8e-75	63.6
AOR22727.1\|596258_597461_+\|capsid	phage major capsid protein	A0A2I4R671	Erysipelothrix_phage	8.6e-166	75.1
AOR22728.1\|597484_597760_+\|head,tail	phage gp6-like head-tail connector protein	NA	NA	NA	NA
AOR22729.1\|597766_598093_+\|head,tail	head-tail adaptor protein	A6M954	Geobacillus_virus	1.2e-13	36.9
AOR22730.1\|598085_598472_+	hypothetical protein	E2ELI9	Clostridium_phage	2.0e-23	45.7
AOR22731.2\|598486_598801_+	hypothetical protein	A0A0K2CZA4	Paenibacillus_phage	1.2e-15	42.0
AOR22732.1\|598804_599374_+\|tail	phage tail protein	A0A2H4J8F3	uncultured_Caudovirales_phage	7.7e-32	43.7
AOR22733.1\|599397_599682_+	hypothetical protein	H0USX2	Bacillus_phage	2.8e-06	34.1
AOR22734.1\|599899_602344_+\|tail	phage tail tape measure protein	A8ATH6	Listeria_phage	1.3e-51	43.5
AOR22735.1\|602345_603053_+\|tail	phage tail protein	A0A1L2BYA2	Clostridium_phage	3.9e-17	26.0
AOR22736.1\|603052_604909_+	hypothetical protein	A0A0A7RUI9	Clostridium_phage	1.8e-53	40.1

DBSCAN-SWA_3

860257 : 930078

Clostridium_phage(44.0%)

transposase,tRNA,protease,portal,tail,coat

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AOR22953.1\|860257_861484_-\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	4.7e-50	50.8
AOR22954.1\|861665_862097_-	hypothetical protein	NA	NA	NA	NA
AUO15605.1\|862447_863107_+	hypothetical protein	NA	NA	NA	NA
AOR22955.1\|863173_864328_+	cysteine desulfurase	A0A1X7QGF3	Faustovirus	6.0e-39	33.0
AOR22956.1\|864311_865214_+\|protease	serine protease	A0A2K9L1P3	Tupanvirus	1.0e-25	36.4
AOR22957.1\|865510_866056_+	RNA polymerase subunit sigma-24	NA	NA	NA	NA
AOR22958.1\|866048_866270_+	UviB-like protein	NA	NA	NA	NA
AOR22959.1\|866553_867513_+	DUF4003 domain-containing protein	NA	NA	NA	NA
AOR22960.1\|867841_870151_+\|protease	ATP-dependent protease	NA	NA	NA	NA
AOR22961.1\|870319_870655_+	anti-sigma F factor antagonist	NA	NA	NA	NA
AOR22962.1\|870671_871103_+	anti-sigma F factor	NA	NA	NA	NA
AOR22963.1\|871112_871871_+	RNA polymerase sporulation sigma factor SigF	A0A0A0RV91	Bacillus_phage	4.0e-44	42.9
AOR24904.2\|872303_872762_+	stage V sporulation protein AC	NA	NA	NA	NA
AOR22964.1\|872880_873900_+	stage V sporulation protein AD	NA	NA	NA	NA
AOR22965.1\|873925_874282_+	stage V sporulation protein AE	NA	NA	NA	NA
AOR22966.1\|874394_876908_+	ATPase	NA	NA	NA	NA
AOR22967.2\|876913_878608_+	competence protein ComEC	NA	NA	NA	NA
AOR22968.1\|878637_879672_+	DNA polymerase III subunit delta	NA	NA	NA	NA
AOR22969.1\|879716_879980_-	30S ribosomal protein S20	NA	NA	NA	NA
AOR22970.2\|880157_881129_+	GPR endopeptidase	NA	NA	NA	NA
AOR22971.1\|881430_882507_+	stage II sporulation protein P	NA	NA	NA	NA
AOR22972.1\|882774_883155_+	hypothetical protein	NA	NA	NA	NA
AOR22973.1\|883297_885100_+	elongation factor 4	E4ZFJ7	Streptococcus_phage	5.5e-23	25.4
AOR22974.1\|885394_886534_+	coproporphyrinogen III oxidase	NA	NA	NA	NA
AOR22975.1\|886718_887750_+	heat-inducible transcriptional repressor HrcA	NA	NA	NA	NA
AOR22976.1\|887788_888403_+	nucleotide exchange factor GrpE	NA	NA	NA	NA
AOR22977.1\|888480_890340_+	molecular chaperone DnaK	A0A2P1EIW2	Megavirus	2.5e-140	46.9
AOR22978.1\|890441_891560_+	molecular chaperone DnaJ	A0A0P0YNN4	Yellowstone_lake_phycodnavirus	2.4e-29	30.9
AOR22979.1\|891678_893289_+\|transposase	IS5/IS1182 family transposase	Q9MBP7	Staphylococcus_prophage	1.2e-66	33.8
AOR22980.1\|893812_894472_+\|tRNA	tRNA (guanosine(46)-N7)-methyltransferase TrmB	NA	NA	NA	NA
AOR22981.1\|894512_895454_+	50S ribosomal protein L11 methyltransferase	NA	NA	NA	NA
AOR22982.1\|895483_896248_+	16S rRNA methyltransferase	NA	NA	NA	NA
AOR22983.1\|896247_897552_+\|tRNA	tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB	NA	NA	NA	NA
AOR22984.1\|897641_897986_+	histidine triad nucleotide-binding protein	NA	NA	NA	NA
AOR22985.1\|898122_898299_+	30S ribosomal protein S21	NA	NA	NA	NA
AOR22986.1\|898328_898778_+\|tRNA	aspartyl-tRNA amidotransferase	A0A292GL36	Xanthomonas_phage	2.3e-18	40.8
AOR22987.1\|899019_899298_+	sporulation protein YqfC	NA	NA	NA	NA
AOR22988.1\|899300_900431_+	sporulation protein YqfD	NA	NA	NA	NA
AOR22989.1\|900465_902541_+	phosphohydrolase	NA	NA	NA	NA
AOR22990.1\|902553_903054_+	rRNA maturation RNase YbeY	NA	NA	NA	NA
AOR22991.1\|903078_903780_+	diacylglycerol kinase	NA	NA	NA	NA
AOR22992.1\|904321_905209_+	GTPase Era	NA	NA	NA	NA
AOR22993.1\|905323_906073_+	DNA repair protein RecO	NA	NA	NA	NA
AOR22994.1\|906079_906688_+	DUF4342 domain-containing protein	NA	NA	NA	NA
AOR22995.1\|906728_907358_+	transcriptional regulator	NA	NA	NA	NA
AOR22996.1\|907442_910070_+	pyruvate, phosphate dikinase	H8YJB7	Vibrio_phage	1.1e-88	42.6
AOR22997.1\|910132_911200_-\|coat	CotS family spore coat protein	NA	NA	NA	NA
AOR22998.1\|911387_912416_+	deoxyguanosinetriphosphate triphosphohydrolase	NA	NA	NA	NA
AOR22999.1\|912664_914443_+	DNA primase	A0A0K1LMQ9	Caulobacter_phage	4.4e-57	34.2
AOR23000.1\|914448_915573_+	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	4.2e-37	37.6
AOR23001.1\|915848_916535_+	SAM-dependent methyltransferase	NA	NA	NA	NA
AOR23002.1\|916850_917642_+	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA
AOR23003.1\|917860_918097_+	hypothetical protein	NA	NA	NA	NA
AOR24905.1\|918584_919049_-	hypothetical protein	A0A0A7RTX7	Clostridium_phage	4.7e-35	48.0
AOR23004.1\|919065_919431_-	XRE family transcriptional regulator	NA	NA	NA	NA
AOR23005.1\|919738_920251_+	hypothetical protein	I2E8Y5	Clostridium_phage	4.1e-32	46.5
AOR23006.1\|920780_921194_+	hypothetical protein	Q708M2	Streptococcus_phage	2.4e-06	28.2
AOR23007.1\|921340_922651_+\|tail	phage tail sheath protein	A0A0A7S087	Clostridium_phage	3.6e-125	53.0
AOR23008.1\|922669_923137_+\|portal	phage portal protein	A0A0A7RVP1	Clostridium_phage	8.8e-58	71.7
AOR23009.1\|923501_923933_+\|transposase	IS200/IS605 family transposase	G9CU69	Helicobacter_phage	1.1e-19	36.6
AOR23010.1\|924115_924529_+	hypothetical protein	A0A0A7RTN3	Clostridium_phage	1.2e-45	63.7
AOR23011.1\|924725_926639_+\|tail	tail length tape measure protein	A0A0A7S0K9	Clostridium_phage	9.8e-79	35.8
AOR23012.1\|926638_927301_+	LysM domain-containing protein	A0A0A7RVP5	Clostridium_phage	2.1e-68	57.7
AOR23013.1\|927312_928284_+	hypothetical protein	A0A0A7RTZ4	Clostridium_phage	7.6e-104	55.2
AOR24906.2\|928287_928617_+	DUF2577 domain-containing protein	A0A0A7RTJ2	Clostridium_phage	1.8e-25	54.7
AOR23014.1\|928609_929017_+	DUF2634 domain-containing protein	A0A0A7RTH1	Clostridium_phage	1.1e-40	64.1
AOR23015.1\|929019_930078_+	hypothetical protein	A0A0A7S0L4	Clostridium_phage	1.3e-93	52.8

DBSCAN-SWA_4

933133 : 941014

Clostridium_phage(62.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AOR23017.1\|933133_933751_+	DUF2313 domain-containing protein	A0A0A7RTU9	Clostridium_phage	2.0e-57	53.2
AOR23018.1\|933765_934776_+	hypothetical protein	A0A1L2BYA7	Clostridium_phage	1.3e-18	30.7
AOR23019.1\|934789_935182_+	hypothetical protein	A0A1L2BYA5	Clostridium_phage	7.2e-21	63.1
AOR23020.1\|935423_935624_+	UviB-like protein	A0A2H4JAI7	uncultured_Caudovirales_phage	9.3e-17	67.7
AOR23021.1\|935639_935870_+	hypothetical protein	F8UBN4	Clostridium_phage	1.7e-09	49.3
AOR23022.1\|935935_936700_+	N-acetylmuramoyl-L-alanine amidase	A0A1L2BYB1	Clostridium_phage	6.0e-104	70.7
AOR23023.1\|936867_937458_+	hypothetical protein	NA	NA	NA	NA
AOR23024.1\|937650_938697_+	exopolysaccharide biosynthesis protein	A0A1P8CWN9	Bacillus_phage	4.9e-08	41.6
AOR23025.1\|938715_939753_+	hypothetical protein	NA	NA	NA	NA
AOR23026.1\|939904_941014_+	sugar ABC transporter ATP-binding protein	Q6GZ03	Mycoplasma_phage	2.0e-20	33.0

DBSCAN-SWA_5

1071540 : 1081427

Cyanophage(28.57%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AOR23137.1\|1071540_1075287_+	phosphoribosylformylglycinamidine synthase	A6N228	Microbacterium_phage	4.8e-29	31.0
AOR23138.1\|1075404_1075884_+	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	4.1e-26	45.5
AOR23139.1\|1075883_1076591_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A1D7SLB8	Cyanophage	1.3e-47	44.8
AOR23140.1\|1076772_1078185_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	1.9e-55	32.2
AOR23141.1\|1078306_1079308_+	phosphoribosylformylglycinamidine cyclo-ligase	A0A1D7SQF5	Cyanophage	6.3e-69	46.2
AOR23142.1\|1079295_1079910_+	phosphoribosylglycinamide formyltransferase	R9S626	Prochlorococcus_phage	1.6e-22	37.2
AOR23143.1\|1079921_1081427_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	E3SNU8	Prochlorococcus_phage	4.0e-35	44.9

DBSCAN-SWA_6

1434891 : 1486515

Bacillus_phage(16.67%)

transposase,protease,head

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUO15613.1\|1434891_1436013_-\|transposase	transposase	NA	NA	NA	NA
AOR23443.1\|1436210_1436552_+	hypothetical protein	NA	NA	NA	NA
AOR23444.1\|1436731_1437760_+	wall-associated protein	F8WPS9	Bacillus_phage	5.7e-25	52.3
AOR23445.1\|1437787_1438453_+	hypothetical protein	NA	NA	NA	NA
AOR23446.1\|1438558_1439074_+	hypothetical protein	NA	NA	NA	NA
AOR23447.1\|1439076_1439400_+	hypothetical protein	NA	NA	NA	NA
AOR23448.1\|1439383_1439728_+	hypothetical protein	NA	NA	NA	NA
AOR23450.2\|1440959_1441424_+	DUF2691 domain-containing protein	NA	NA	NA	NA
AOR23451.2\|1442360_1443497_+	hypothetical protein	A0A2H4JHK7	uncultured_Caudovirales_phage	4.1e-08	37.7
AOR23452.1\|1443502_1443826_+	hypothetical protein	NA	NA	NA	NA
AOR23453.1\|1443983_1444193_+	hypothetical protein	NA	NA	NA	NA
AOR23454.1\|1444402_1445137_-	GntR family transcriptional regulator	NA	NA	NA	NA
AOR23455.1\|1445862_1446645_+	uridine phosphorylase	NA	NA	NA	NA
AOR23456.1\|1446817_1448020_+	Na+ dependent nucleoside transporter domain-containing protein	NA	NA	NA	NA
AOR23457.1\|1448185_1449376_+	phosphopentomutase	NA	NA	NA	NA
AOR23458.1\|1449540_1450356_+	transketolase	NA	NA	NA	NA
AOR23459.1\|1450369_1451296_+	transketolase	NA	NA	NA	NA
AOR23460.1\|1451362_1452070_+	purine-nucleoside phosphorylase	NA	NA	NA	NA
AOR23461.1\|1452241_1452886_+	fructose-6-phosphate aldolase	A0A0E3HNZ3	Synechococcus_phage	1.0e-48	47.7
AOR23462.1\|1453478_1455209_+	ribonuclease J	NA	NA	NA	NA
AOR23463.1\|1455567_1458069_+	dynamin family protein	NA	NA	NA	NA
AOR23464.1\|1458095_1458854_+	viral A-type inclusion protein	NA	NA	NA	NA
AOR23465.1\|1458861_1460631_+	dynamin family protein	NA	NA	NA	NA
AOR23466.1\|1460850_1462653_+	GTP-binding protein	NA	NA	NA	NA
AOR23467.1\|1464359_1465520_+	methyltransferase type 11	NA	NA	NA	NA
AOR23468.1\|1465967_1468133_+	transcriptional regulator	NA	NA	NA	NA
AOR23469.1\|1468199_1468628_+\|protease	membrane-associated protease 1	NA	NA	NA	NA
AOR23470.1\|1468641_1469067_+\|protease	membrane-associated protease 1	NA	NA	NA	NA
AOR23471.1\|1469416_1469854_+	J domain-containing protein	A0A1V0SIM1	Klosneuvirus	3.0e-15	60.9
AOR24917.2\|1469895_1470453_+\|head	Forkhead-associated protein	NA	NA	NA	NA
AOR23472.1\|1470466_1470976_+	hypothetical protein	NA	NA	NA	NA
AOR23473.1\|1471950_1473792_+	serine/threonine protein phosphatase	NA	NA	NA	NA
AOR23474.1\|1473784_1475062_+	normocyte-binding protein	NA	NA	NA	NA
AOR23475.1\|1475058_1475757_+	hypothetical protein	NA	NA	NA	NA
AOR23476.1\|1475863_1478512_+	molecular chaperone	NA	NA	NA	NA
AOR23477.1\|1478708_1479488_+	hypothetical protein	NA	NA	NA	NA
AOR23478.1\|1479730_1480585_+	DUF2167 domain-containing protein	NA	NA	NA	NA
AOR23479.1\|1480647_1480920_+	hypothetical protein	NA	NA	NA	NA
AOR23480.1\|1480921_1482100_+	molybdopterin biosynthesis protein MoeB	A0A1V0SCZ9	Indivirus	2.7e-18	35.9
AOR23481.1\|1482096_1483821_+	ubiquitin--protein ligase	NA	NA	NA	NA
AOR23482.1\|1483847_1484663_+\|protease	serine protease HtrA	A0A1B1IT49	uncultured_Mediterranean_phage	3.0e-13	32.9
AOR23483.1\|1484785_1485460_+	hypothetical protein	NA	NA	NA	NA
AUO15614.1\|1485495_1486515_+\|protease	metal-dependent protease of the PAD1/JAB1 superfamily	NA	NA	NA	NA

DBSCAN-SWA_7

1715382 : 1759437

Leptospira_phage(25.0%)

holin,transposase,coat

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AOR23659.1\|1715382_1715733_+\|transposase	transposase	NA	NA	NA	NA
AOR24931.2\|1715843_1717454_+\|transposase	IS66 family transposase	S5VTD3	Leptospira_phage	3.4e-64	32.1
AOR23660.1\|1717688_1718423_-	hypothetical protein	NA	NA	NA	NA
AOR23661.1\|1718556_1719057_+\|coat	spore coat protein	NA	NA	NA	NA
AOR23662.1\|1719152_1719611_-	hypothetical protein	NA	NA	NA	NA
AOR24932.2\|1719708_1720899_-	hypothetical protein	NA	NA	NA	NA
AOR23663.1\|1721307_1722525_-	MFS transporter	NA	NA	NA	NA
AOR23664.1\|1722670_1723570_+	LysR family transcriptional regulator	NA	NA	NA	NA
AOR23665.1\|1723844_1724510_-	CoA transferase subunit B	NA	NA	NA	NA
AOR23666.1\|1724510_1725164_-	branched-chain amino acid dehydrogenase	NA	NA	NA	NA
AOR23667.1\|1725237_1726641_-	aldehyde dehydrogenase EutE	NA	NA	NA	NA
AOR23668.1\|1727306_1728047_-	acetoacetate decarboxylase	NA	NA	NA	NA
AOR23669.1\|1728604_1729060_-	peptide deformylase	E3SLL2	Synechococcus_phage	9.9e-14	42.3
AOR23670.1\|1729060_1729297_-	transcriptional regulator	NA	NA	NA	NA
AOR23671.1\|1729479_1729812_-	cupin domain-containing protein	NA	NA	NA	NA
AOR23672.1\|1729937_1730576_-	hypothetical protein	NA	NA	NA	NA
AOR23673.1\|1730794_1731157_-\|holin	phage holin family protein	NA	NA	NA	NA
AOR23674.1\|1731274_1732003_-	DUF434 domain-containing protein	NA	NA	NA	NA
AOR23675.1\|1732161_1732749_-	hypothetical protein	NA	NA	NA	NA
AOR23676.1\|1733065_1733839_-	endonuclease	NA	NA	NA	NA
AOR23677.1\|1734520_1736008_-	reverse transcriptase	NA	NA	NA	NA
AOR23678.1\|1736004_1737813_-	hypothetical protein	NA	NA	NA	NA
AOR23679.1\|1737802_1740820_-	hypothetical protein	NA	NA	NA	NA
AOR23680.1\|1741202_1742006_+	zinc transporter ZupT	NA	NA	NA	NA
AOR23681.1\|1742259_1742481_-	hypothetical protein	NA	NA	NA	NA
AOR23682.1\|1743014_1744337_-	NCS2 family permease	NA	NA	NA	NA
AOR23683.1\|1744665_1745166_-	hypothetical protein	NA	NA	NA	NA
AOR23684.1\|1745615_1747295_-	chemotaxis protein	NA	NA	NA	NA
AOR23685.1\|1747689_1749201_-	LexA family transcriptional regulator	A0A2H4UW05	Bodo_saltans_virus	8.1e-12	27.5
AOR23686.1\|1749564_1749903_-	alkylphosphonate utilization protein	NA	NA	NA	NA
AOR23687.1\|1750267_1750948_-	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA
AOR23688.1\|1751260_1752463_+\|transposase	transposase	NA	NA	NA	NA
AOR23689.1\|1752708_1754409_-	pyridine nucleotide-disulfide oxidoreductase	NA	NA	NA	NA
AOR23690.1\|1754494_1754815_-	rhodanese-like domain-containing protein	NA	NA	NA	NA
AOR23691.1\|1755068_1755605_-	hypothetical protein	NA	NA	NA	NA
AOR23692.1\|1757018_1758056_-	hypothetical protein	NA	NA	NA	NA
AOR23693.1\|1758235_1758592_+	hypothetical protein	NA	NA	NA	NA
AOR23694.1\|1759005_1759437_-\|transposase	IS200/IS605 family transposase	G9CU69	Helicobacter_phage	1.1e-19	36.6

DBSCAN-SWA_8

1973872 : 2016480

uncultured_Mediterranean_phage(22.22%)

transposase,holin,tRNA,protease,portal

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AOR23857.1\|1973872_1974124_-\|holin	holin	A0A0A7RW97	Clostridium_phage	1.9e-14	51.3
AOR23858.1\|1974867_1975863_-\|protease	serine protease	NA	NA	NA	NA
AOR23859.1\|1976214_1979730_-	pyruvate:ferredoxin (flavodoxin) oxidoreductase	NA	NA	NA	NA
AOR23860.1\|1980005_1980413_+	hypothetical protein	NA	NA	NA	NA
AOR23861.1\|1982011_1983139_-	glycerate kinase	W6LM47	Streptococcus_phage	3.8e-46	37.3
AOR24939.1\|1983425_1983890_+	hypothetical protein	NA	NA	NA	NA
AUO15622.1\|1983915_1984221_+	hypothetical protein	NA	NA	NA	NA
AOR23862.2\|1984314_1984893_-	hypothetical protein	NA	NA	NA	NA
AOR23863.1\|1985360_1985516_-	cytochrome C551	NA	NA	NA	NA
AOR23864.1\|1985921_1987580_-\|tRNA	glutamine--tRNA ligase/YqeY domain fusion protein	A0A222YZ70	Escherichia_phage	2.9e-172	56.8
AOR23865.1\|1987902_1989564_-\|tRNA	glutamate--tRNA ligase	NA	NA	NA	NA
AOR23866.1\|1990064_1990631_-	SAM-dependent methyltransferase	NA	NA	NA	NA
AOR23867.1\|1990835_1992011_+	cell wall-binding protein	NA	NA	NA	NA
AOR23868.1\|1993642_1994410_-	peroxide stress protein YaaA	NA	NA	NA	NA
AOR23869.1\|1994634_1995624_+	hypothetical protein	NA	NA	NA	NA
AOR23870.1\|1995620_1996898_+	FAD-dependent oxidoreductase	NA	NA	NA	NA
AOR23871.1\|1996981_1997851_-	D-alanyl-D-alanine carboxypeptidase	NA	NA	NA	NA
AOR23872.1\|1997989_1998556_+	DUF2953 domain-containing protein	NA	NA	NA	NA
AOR23873.1\|1998545_1999028_+	sporulation protein YtfJ	NA	NA	NA	NA
AOR23874.1\|1999272_1999866_-	segregation/condensation protein B	A0A1B1IVT7	uncultured_Mediterranean_phage	1.7e-18	34.4
AOR23875.1\|1999849_2000605_-	segregation/condensation protein A	A0A1B1IVW1	uncultured_Mediterranean_phage	4.7e-08	37.0
AOR23876.1\|2001064_2002255_-	D-alanyl-D-alanine carboxypeptidase	B6DZZ7	Stx2-converting_phage	4.7e-31	30.5
AOR23877.1\|2002740_2003619_-	recombinase XerD	A0A1B1P7C7	Bacillus_phage	2.2e-17	26.9
AOR24940.2\|2003738_2004371_-	stage II sporulation protein M	NA	NA	NA	NA
AOR24941.2\|2004570_2006148_-	alpha-amylase	NA	NA	NA	NA
AOR23878.1\|2006249_2006672_-	hypothetical protein	NA	NA	NA	NA
AOR23879.1\|2006895_2007438_+	hypothetical protein	NA	NA	NA	NA
AOR23880.1\|2008711_2009143_-\|transposase	IS200/IS605 family transposase	G9CU69	Helicobacter_phage	1.1e-19	36.6
AOR23881.1\|2009762_2009987_-	iduronate sulfatase	NA	NA	NA	NA
AOR23882.1\|2009998_2011084_-	hypothetical protein	NA	NA	NA	NA
AOR24942.2\|2011203_2012814_-\|transposase	IS66 family transposase	S5VTD3	Leptospira_phage	3.4e-64	32.1
AOR23883.1\|2012924_2013275_-\|transposase	transposase	NA	NA	NA	NA
AOR23884.1\|2013262_2013595_-	hypothetical protein	NA	NA	NA	NA
AOR23885.1\|2013694_2014039_-	hypothetical protein	NA	NA	NA	NA
AUO15623.1\|2015184_2016480_-\|portal	portal protein	NA	NA	NA	NA

DBSCAN-SWA_9

2421064 : 2519682

107

Clostridium_phage(40.0%)

head,transposase,integrase,tRNA,terminase,protease,portal,tail

attL 2515889:2515907|attR 2527931:2527949

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AOR24229.1\|2421064_2422354_-\|protease	ATP-dependent protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	6.7e-148	64.1
AOR24230.1\|2422393_2422993_-\|protease	ATP-dependent Clp protease proteolytic subunit	A0A223W000	Agrobacterium_phage	1.5e-54	57.1
AOR24231.1\|2423152_2424436_-	trigger factor	NA	NA	NA	NA
AOR24232.1\|2424528_2425335_-	hypothetical protein	NA	NA	NA	NA
AOR24233.1\|2425433_2425640_-	hypothetical protein	NA	NA	NA	NA
AOR24234.1\|2425830_2426988_-\|tRNA	tRNA 4-thiouridine(8) synthase ThiI	NA	NA	NA	NA
AOR24235.1\|2426987_2428133_-	cysteine desulfurase	A0A1X7C038	Faustovirus	3.7e-33	27.4
AOR24236.1\|2428371_2428809_-	hypothetical protein	NA	NA	NA	NA
AOR24237.1\|2428808_2429705_-	homoserine kinase	NA	NA	NA	NA
AOR24238.1\|2429708_2431172_-	threonine synthase	NA	NA	NA	NA
AOR24239.1\|2431289_2432228_-	hypothetical protein	NA	NA	NA	NA
AOR24240.1\|2432433_2433417_+	alpha/beta hydrolase	A0A0G2YDK2	Acanthamoeba_polyphaga_mimivirus	7.4e-06	23.8
AOR24241.1\|2433691_2434249_-	DUF3867 domain-containing protein	NA	NA	NA	NA
AOR24242.1\|2434576_2435374_-	cobalt chelatase	NA	NA	NA	NA
AOR24243.1\|2435363_2436647_-	glutamate-1-semialdehyde 2,1-aminomutase	NA	NA	NA	NA
AOR24244.1\|2436722_2437688_-	delta-aminolevulinic acid dehydratase	NA	NA	NA	NA
AOR24245.1\|2437837_2439313_-	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA
AOR24246.1\|2439430_2440303_-	hydroxymethylbilane synthase	NA	NA	NA	NA
AOR24247.1\|2440475_2441153_-	precorrin-2 dehydrogenase	NA	NA	NA	NA
AOR24248.1\|2441110_2442316_-\|tRNA	glutamyl-tRNA reductase	NA	NA	NA	NA
AOR24249.1\|2442771_2443629_-	(4Fe-4S)-binding protein	NA	NA	NA	NA
AOR24250.1\|2443842_2444484_+	dihydroorotate dehydrogenase	A0A076FI83	Aureococcus_anophage	3.4e-12	27.8
AOR24251.1\|2444768_2445038_+	DUF1294 domain-containing protein	NA	NA	NA	NA
AOR24252.1\|2445268_2446621_-	sodium-dependent transporter	NA	NA	NA	NA
AOR24253.1\|2446832_2448050_-\|transposase	IS701 family transposase	NA	NA	NA	NA
AOR24255.1\|2448888_2449947_+	6-phosphogluconolactonase	NA	NA	NA	NA
AOR24256.1\|2450049_2450859_-	sugar-phosphatase	NA	NA	NA	NA
AOR24257.1\|2451107_2451731_+	sporulation membrane protein YtaF	NA	NA	NA	NA
AOR24258.1\|2452064_2453570_-	cobyric acid synthase CobQ	NA	NA	NA	NA
AOR24259.1\|2453620_2454274_-	ATP-binding protein	NA	NA	NA	NA
AOR24260.1\|2454334_2455411_-	threonine-phosphate decarboxylase	NA	NA	NA	NA
AOR24261.1\|2455403_2456354_-	adenosylcobinamide-phosphate synthase	NA	NA	NA	NA
AOR24262.1\|2456382_2456985_-	histidine phosphatase family protein	NA	NA	NA	NA
AOR24263.1\|2456977_2457358_-	cobalamin biosynthesis protein CobU	NA	NA	NA	NA
AOR24264.1\|2457654_2458410_-	adenosylcobinamide-GDP ribazoletransferase	NA	NA	NA	NA
AOR24265.1\|2458433_2458973_-	adenosylcobinamide kinase/adenosylcobinamide phosphate guanyltransferase	NA	NA	NA	NA
AOR24266.2\|2458974_2459508_-	cob(I)yrinic acid a,c-diamide adenosyltransferase	NA	NA	NA	NA
AOR24267.2\|2460126_2461701_-	ABC transporter permease	NA	NA	NA	NA
AOR24268.1\|2461702_2462830_-	proline/glycine betaine ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.3e-27	37.4
AOR24269.1\|2462929_2463559_-	GntR family transcriptional regulator	NA	NA	NA	NA
AOR24270.1\|2463769_2464252_-	lipid hydroperoxide peroxidase	NA	NA	NA	NA
AOR24271.1\|2464398_2465496_-	nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase	NA	NA	NA	NA
AOR24272.1\|2465677_2466442_-	cobalt-precorrin-6A reductase	NA	NA	NA	NA
AOR24273.1\|2466441_2467179_-	precorrin-3B C(17)-methyltransferase	NA	NA	NA	NA
AOR24274.1\|2467191_2468259_-	cobalamin biosynthesis protein CbiG	NA	NA	NA	NA
AOR24275.1\|2468255_2469014_-	precorrin-4 C(11)-methyltransferase	NA	NA	NA	NA
AOR24276.1\|2469097_2469763_-	precorrin-2 C(20)-methyltransferase	NA	NA	NA	NA
AOR24277.1\|2469766_2470345_-	precorrin-6Y C5,15-methyltransferase (decarboxylating) subunit CbiT	NA	NA	NA	NA
AOR24278.1\|2470355_2470958_-	precorrin-6y C5,15-methyltransferase (decarboxylating) subunit CbiE	NA	NA	NA	NA
AOR24279.1\|2470965_2472111_-	cobalamin biosynthesis protein CbiD	NA	NA	NA	NA
AOR24280.1\|2472428_2473055_-	precorrin-8X methylmutase	NA	NA	NA	NA
AOR24281.1\|2473129_2474446_-	cobyrinic acid a,c-diamide synthase	NA	NA	NA	NA
AOR24282.1\|2474611_2475442_-	sirohydrochlorin cobaltochelatase	NA	NA	NA	NA
AOR24283.1\|2475989_2476538_+	hypothetical protein	NA	NA	NA	NA
AOR24284.1\|2476667_2477981_-	sodium-dependent transporter	NA	NA	NA	NA
AOR24285.1\|2478773_2478971_-	hypothetical protein	NA	NA	NA	NA
AOR24286.1\|2479037_2479730_-	hypothetical protein	NA	NA	NA	NA
AOR24287.1\|2480630_2481779_+\|transposase	transposase	A0A1S5S7K9	Streptococcus_phage	8.7e-06	25.8
AOR24288.2\|2481765_2483703_+\|transposase	transposase	NA	NA	NA	NA
AOR24289.1\|2483692_2484079_+\|transposase	transposase	NA	NA	NA	NA
AOR24290.1\|2484176_2484455_-	XRE family transcriptional regulator	A0A0A7S0F1	Clostridium_phage	1.4e-10	41.9
AOR24291.1\|2484673_2484880_+	XRE family transcriptional regulator	NA	NA	NA	NA
AOR24292.1\|2484963_2485704_-	N-acetylmuramoyl-L-alanine amidase	A0A1L2BYB1	Clostridium_phage	8.0e-45	38.8
AOR24293.1\|2485746_2486166_-	hypothetical protein	A0A0A7RTU1	Clostridium_phage	1.3e-47	64.7
AOR24294.1\|2486264_2486561_-	hypothetical protein	A0A2H4JGH3	uncultured_Caudovirales_phage	4.0e-08	60.9
AOR24295.1\|2486593_2486968_-	hypothetical protein	A0A1L2BYA5	Clostridium_phage	3.3e-23	55.6
AOR24296.1\|2486979_2490363_-	hypothetical protein	A0A1L2BYA7	Clostridium_phage	1.5e-26	37.6
AOR24297.1\|2490381_2492229_-	endopeptidase	A0A2H4JFY7	uncultured_Caudovirales_phage	5.2e-37	30.2
AOR24298.1\|2492225_2492894_-\|tail	phage tail protein	A0A0A7RWN1	Clostridium_phage	7.5e-18	33.9
AOR24299.1\|2492904_2495643_-\|tail	phage tail tape measure protein	A0A0U4IIN6	Exiguobacterium_phage	1.6e-26	28.3
AOR24300.1\|2495647_2495953_-	hypothetical protein	NA	NA	NA	NA
AOR24301.1\|2495955_2496255_-	hypothetical protein	NA	NA	NA	NA
AOR24302.1\|2496255_2496819_-	hypothetical protein	NA	NA	NA	NA
AOR24303.1\|2496818_2497172_-	hypothetical protein	NA	NA	NA	NA
AOR24304.1\|2497172_2497583_-	hypothetical protein	A0A0A7AQU9	Bacillus_phage	3.2e-11	42.2
AOR24305.1\|2497575_2497890_-\|head,tail	phage head-tail adapter protein	NA	NA	NA	NA
AOR24959.2\|2497894_2498212_-	hypothetical protein	NA	NA	NA	NA
AOR24306.1\|2498250_2499138_-	hypothetical protein	A0A0A7AQF5	Bacillus_phage	1.5e-74	52.4
AOR24307.1\|2499157_2499766_-	hypothetical protein	A0A0A8WEG1	Clostridium_phage	1.4e-23	38.5
AUO15633.1\|2500108_2501617_-	hypothetical protein	D2IYW4	Enterococcus_phage	3.6e-12	24.5
AOR24960.2\|2501606_2503073_-\|portal	phage portal protein	A0A1W6JPB8	Staphylococcus_phage	3.9e-75	37.5
AOR24308.1\|2503102_2504503_-\|terminase	terminase	A0A090EUA8	Clostridium_phage	3.8e-205	75.6
AOR24309.1\|2504495_2504975_-\|transposase	transposase	A0A0A7RTX1	Clostridium_phage	4.5e-49	60.9
AOR24310.1\|2505031_2505547_-	hypothetical protein	NA	NA	NA	NA
AOR24311.1\|2505965_2506181_-	hypothetical protein	NA	NA	NA	NA
AOR24312.1\|2506183_2506708_-	hypothetical protein	NA	NA	NA	NA
AOR24313.1\|2506892_2507210_-	hypothetical protein	NA	NA	NA	NA
AOR24314.1\|2507209_2507461_-	stage III sporulation protein D	NA	NA	NA	NA
AOR24315.1\|2507548_2507749_-	hypothetical protein	NA	NA	NA	NA
AOR24316.1\|2507761_2508163_-	single-stranded DNA-binding protein	Q8SBL5	Clostridium_phage	3.1e-19	41.4
AOR24317.1\|2508181_2508577_-	RusA family crossover junction endodeoxyribonuclease	A0A2K9V3I2	Faecalibacterium_phage	5.6e-13	38.5
AOR24318.1\|2508812_2509199_-\|transposase	transposase	NA	NA	NA	NA
AOR24319.2\|2509188_2511126_-\|transposase	transposase	NA	NA	NA	NA
AOR24320.1\|2511112_2512261_-\|transposase	transposase	A0A1S5S7K9	Streptococcus_phage	8.7e-06	25.8
AOR24321.1\|2512398_2512719_-	hypothetical protein	NA	NA	NA	NA
AOR24322.1\|2512932_2513436_-	hypothetical protein	NA	NA	NA	NA
AOR24323.1\|2513465_2514209_-	DNA replication protein DnaD	A0A0B5D175	Listeria_phage	4.4e-43	63.8
AUO15634.1\|2514219_2514798_-	recombinase	Q9B0G3	Staphylococcus_virus	2.4e-36	49.3
AOR24324.1\|2514810_2515323_-	hypothetical protein	A0A0A7S0G6	Clostridium_phage	1.8e-40	52.3
AOR24325.1\|2515336_2515528_-	hypothetical protein	NA	NA	NA	NA
AOR24326.1\|2515731_2515944_-	hypothetical protein	A0A0A7RTW4	Clostridium_phage	1.8e-05	37.9
2515889:2515907	attL	NA	NA	NA	NA
AOR24327.2\|2515961_2516816_-	hypothetical protein	X5JAW6	Clostridium_phage	6.6e-35	49.0
AOR24328.1\|2516816_2517059_-	excisionase	NA	NA	NA	NA
AOR24329.1\|2517058_2517271_-	XRE family transcriptional regulator	I3VYZ0	Thermoanaerobacterium_phage	2.4e-10	45.7
AUO15635.1\|2517495_2518008_+	helix-turn-helix domain-containing protein	I3VYZ1	Thermoanaerobacterium_phage	9.2e-08	38.8
AOR24330.1\|2518021_2518495_+	hypothetical protein	A0A2I7SC21	Paenibacillus_phage	2.6e-17	33.1
AOR24331.1\|2518509_2519682_+\|integrase	site-specific integrase	A0A0A8WIF9	Clostridium_phage	1.8e-30	28.2
2527931:2527949	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. CP017256

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: CP017256_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP017256_1

8343-8964

Orphan

II-B

Consensus_repeat	Method
ATTTAAATACATCTCATGTTAAGGTTAAAC	CRISPRCasFinder
ATTTAAATACATCTCATGTTAAGGTTAAAC	CRT
ATTTAAATACATCTCATGTTAAGGTTAAAC	PILER-CR

9 spacers

The CRISPR arrays of CP017256_1

>merge|CP017256|1|8343-8964|CRISPRCasFinder,CRT,PILER-CR
TTTATTATACATCTCATGTTAAGGTTAAACAGTCATACAACTTCTGTTGACTTGTCCCCTTTAATATTTAAATACATCTCATGTTAAGGTTAAACAGATTCTTGCTATTCATTACTTGAAGAAATAATAACATTTAAATACATCTCATGTTAAGGTTAAACGAAGAAGTGTGGTCAGATGGTTCTAGCACTTATAATGATTTAAATACATCTCATGTTAAGGTTAAACATGAAGATATGTCTTATTTATTATGTATTCTAAAATTTAAATACATCTCATGTTAAGGTTAAACTCTTAAAACTAAAATGGCTAATACTAAGAGTGAAGCATTTAAATACATCTCATGTTAAGGTTAAACAGTTTGTGAAAATGGAATATATAGAACCACAGAAGTATTTAAATACATCTCATGTTAAGGTTAAACAGTGTAACTCCCCATTGCCCCGTTACTAGGGCTTCCAATTTAAATACATCTCATGTTAAGGTTAAACAACCTATAAGTGCAAATGTTGTGGTGCTAGTGTACCATTTAAATACATCTCATGTTAAGGTTAAACATTGGTTTAATATTTTTACTTCCACAGTAAGGACAATTTAAATACATCTCATGTTAAGGTTAAAC

>CP017256|1|1|8343-8964|CRISPRCasFinder
TTTATTATACATCTCATGTTAAGGTTAAAC	AGTCATACAACTTCTGTTGACTTGTCCCCTTTAAT
ATTTAAATACATCTCATGTTAAGGTTAAAC	AGATTCTTGCTATTCATTACTTGAAGAAATAATAAC
ATTTAAATACATCTCATGTTAAGGTTAAAC	GAAGAAGTGTGGTCAGATGGTTCTAGCACTTATAATG
ATTTAAATACATCTCATGTTAAGGTTAAAC	ATGAAGATATGTCTTATTTATTATGTATTCTAAA
ATTTAAATACATCTCATGTTAAGGTTAAAC	TCTTAAAACTAAAATGGCTAATACTAAGAGTGAAGC
ATTTAAATACATCTCATGTTAAGGTTAAAC	AGTTTGTGAAAATGGAATATATAGAACCACAGAAGT
ATTTAAATACATCTCATGTTAAGGTTAAAC	AGTGTAACTCCCCATTGCCCCGTTACTAGGGCTTCCA
ATTTAAATACATCTCATGTTAAGGTTAAAC	AACCTATAAGTGCAAATGTTGTGGTGCTAGTGTACC
ATTTAAATACATCTCATGTTAAGGTTAAAC	ATTGGTTTAATATTTTTACTTCCACAGTAAGGACA
ATTTAAATACATCTCATGTTAAGGTTAAAC

>CP017256|1|1|8343-8964|CRT
TTTATTATACATCTCATGTTAAGGTTAAAC	AGTCATACAACTTCTGTTGACTTGTCCCCTTTAAT
ATTTAAATACATCTCATGTTAAGGTTAAAC	AGATTCTTGCTATTCATTACTTGAAGAAATAATAAC
ATTTAAATACATCTCATGTTAAGGTTAAAC	GAAGAAGTGTGGTCAGATGGTTCTAGCACTTATAATG
ATTTAAATACATCTCATGTTAAGGTTAAAC	ATGAAGATATGTCTTATTTATTATGTATTCTAAA
ATTTAAATACATCTCATGTTAAGGTTAAAC	TCTTAAAACTAAAATGGCTAATACTAAGAGTGAAGC
ATTTAAATACATCTCATGTTAAGGTTAAAC	AGTTTGTGAAAATGGAATATATAGAACCACAGAAGT
ATTTAAATACATCTCATGTTAAGGTTAAAC	AGTGTAACTCCCCATTGCCCCGTTACTAGGGCTTCCA
ATTTAAATACATCTCATGTTAAGGTTAAAC	AACCTATAAGTGCAAATGTTGTGGTGCTAGTGTACC
ATTTAAATACATCTCATGTTAAGGTTAAAC	ATTGGTTTAATATTTTTACTTCCACAGTAAGGACA
ATTTAAATACATCTCATGTTAAGGTTAAAC

>CP017256|1|1|8408-8964|PILER-CR
ATTTAAATACATCTCATGTTAAGGTTAAAC	AGATTCTTGCTATTCATTACTTGAAGAAATAATAAC
ATTTAAATACATCTCATGTTAAGGTTAAAC	GAAGAAGTGTGGTCAGATGGTTCTAGCACTTATAATG
ATTTAAATACATCTCATGTTAAGGTTAAAC	ATGAAGATATGTCTTATTTATTATGTATTCTAAA
ATTTAAATACATCTCATGTTAAGGTTAAAC	TCTTAAAACTAAAATGGCTAATACTAAGAGTGAAGC
ATTTAAATACATCTCATGTTAAGGTTAAAC	AGTTTGTGAAAATGGAATATATAGAACCACAGAAGT
ATTTAAATACATCTCATGTTAAGGTTAAAC	AGTGTAACTCCCCATTGCCCCGTTACTAGGGCTTCCA
ATTTAAATACATCTCATGTTAAGGTTAAAC	AACCTATAAGTGCAAATGTTGTGGTGCTAGTGTACC
ATTTAAATACATCTCATGTTAAGGTTAAAC	ATTGGTTTAATATTTTTACTTCCACAGTAAGGACA
ATTTAAATACATCTCATGTTAAGGTTAAAC

Protein	Signature genes	Signature genes Name	Protein_function
CP017256.2\|AOR25066.1\|21876_22401_+\|N-acetyltransferase	unknown	unknown	gnl\|CDD\|379112
CP017256.2\|AOR25061.1\|14490_15525_+\|exopolysaccharide-biosynthesis-protein	unknown	unknown	gnl\|CDD\|226979
CP017256.2\|AOR25058.1\|7063_7765_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|340890
CP017256.2\|AOR25065.1\|19839_20772_-\|DUF4163-domain-containing-protein	unknown	unknown	gnl\|CDD\|379356
CP017256.2\|AOR25062.1\|15542_16571_+\|dipeptidyl-peptidase-IV	unknown	unknown	unknown
CP017256.2\|AOR25055.1\|3693_5643_-\|site-specific-DNA-methyltransferase	unknown	unknown	gnl\|CDD\|225100
CP017256.2\|AOR25067.1\|22633_23023_-\|hypothetical-protein	unknown	unknown	unknown
CP017256.2\|AOR25060.1\|11556_12162_+\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|274357
CP017256.2\|AOR25190.2\|12196_13708_-\|clostripain	unknown	unknown	gnl\|CDD\|131853
CP017256.2\|AOR25056.1\|5733_5970_-\|hypothetical-protein	unknown	unknown	unknown
CP017256.2\|AOR25054.1\|507_3681_-\|restriction-endonuclease-subunit-R	unknown	unknown	gnl\|CDD\|226115
CP017256.2\|AOR25059.1\|9696_10341_-\|hypothetical-protein	unknown	unknown	unknown
CP017256.2\|AOR25057.1\|6734_6977_-\|hypothetical-protein	unknown	unknown	unknown
CP017256.2\|AOR25063.1\|17209_18130_-\|tyrosine-recombinase-XerC	unknown	unknown	gnl\|CDD\|234698
CP017256.2\|AOR25064.1\|18360_18897_+\|nitroreductase	unknown	unknown	gnl\|CDD\|380316

Protein	Function_ID	Function_description	E-value
CP017256.2\|AOR25060.1\|11556_12162_+\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|274357	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family. This model encompasses all varieties of the sigma-70 type sigma factors including the ECF subfamily. A number of sigma factors have names with a different number than 70 (i.e. sigma-38), but in fact, all except for the Sigma-54 family (TIGR02395) are included within this family. Several Pfam models hit segments of these sequences including Sigma-70 region 2 (pfam04542) and Sigma-70, region 4 (pfam04545), but not always above their respective trusted cutoffs.	3.1758e-20
CP017256.2\|AOR25190.2\|12196_13708_-\|clostripain	gnl\|CDD\|131853	TIGR02806, Contains:_Clostripain_light_chain, clostripain. Clostripain is a cysteine protease characterized from Clostridium histolyticum, and also known from Clostridium perfringens. It is a heterodimer processed from a single precursor polypeptide, specific for Arg-\|-Xaa peptide bonds. The older term alpha-clostripain refers to the most active, most reduced form, rather than to the product of one of several different genes. Clostripain belongs to the peptidase family C11, or clostripain family (see pfam03415). [Protein fate, Degradation of proteins, peptides, and glycopeptides, Cellular processes, Pathogenesis].	0
CP017256.2\|AOR25054.1\|507_3681_-\|restriction-endonuclease-subunit-R	gnl\|CDD\|226115	COG3587, COG3587, Restriction endonuclease [Defense mechanisms].	0
CP017256.2\|AOR25058.1\|7063_7765_-\|hypothetical-protein	gnl\|CDD\|340890	cd17332, MFS_MelB_like, Salmonella enterica Na+/melibiose symporter MelB and similar transporters of the Major Facilitator Superfamily. This family is composed of Salmonella enterica Na+/melibiose symporter MelB, Major Facilitator Superfamily domain-containing proteins, MFSD2 and MFSD12, and other sugar transporters. MelB catalyzes the electrogenic symport of galactosides with Na+, Li+ or H+. The MFSD2 subfamily is composed of two vertebrate members, MFSD2A and MFSD2B. MFSD2A is more commonly called sodium-dependent lysophosphatidylcholine symporter 1 (NLS1). It is an LPC symporter that plays an essential role for blood-brain barrier formation and function. Inactivating mutations in MFSD2A cause a lethal microcephaly syndrome. MFSD2B is a potential risk or protect factor in the prognosis of lung adenocarcinoma. MelB-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	0.00125323
CP017256.2\|AOR25064.1\|18360_18897_+\|nitroreductase	gnl\|CDD\|380316	cd02139, nitroreductase, nitroreductase family protein. A subfamily of the nitroreductase family containing uncharacterized proteins. Nitroreductase catalyzes the reduction of nitroaromatic compounds such as nitrotoluenes, nitrofurans and nitroimidazoles. This process requires NAD(P)H as electron donor in an obligatory two-electron transfer and uses FMN as cofactor. The enzyme is typically a homodimer.	3.86705e-73
CP017256.2\|AOR25065.1\|19839_20772_-\|DUF4163-domain-containing-protein	gnl\|CDD\|379356	pfam13739, DUF4163, Domain of unknown function (DUF4163). The structure of this domain is and alpha-beta-two layer sandwich, identified from a Fervidobacterium nodosum Rt17-B1 like protein. The function is not known except that it is found in association with Heat-shock cognate 70kd protein 44kd ATPase, pfam11738.	1.75746e-05
CP017256.2\|AOR25061.1\|14490_15525_+\|exopolysaccharide-biosynthesis-protein	gnl\|CDD\|226979	COG4632, EpsL, Exopolysaccharide biosynthesis protein related to N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase [Carbohydrate transport and metabolism].	5.96173e-62
CP017256.2\|AOR25063.1\|17209_18130_-\|tyrosine-recombinase-XerC	gnl\|CDD\|234698	PRK00236, xerC, site-specific tyrosine recombinase XerC; Reviewed.	3.28777e-104
CP017256.2\|AOR25055.1\|3693_5643_-\|site-specific-DNA-methyltransferase	gnl\|CDD\|225100	COG2189, COG2189, Adenine specific DNA methylase Mod [DNA replication, recombination, and repair].	5.48586e-40
CP017256.2\|AOR25066.1\|21876_22401_+\|N-acetyltransferase	gnl\|CDD\|379112	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	1.59672e-18

>CP017256.2|AOR25058.1|7063_7765_-|hypothetical-protein
MDSHKDRVKKYLITFTIIVVLDILCVLLLWISKGEDYKLYYSAIGCLSGGFVGGIGTLIAVVITTEETRKIQQENKKNIMDKDYFEDVKRNKPILILKEQDLGTDYAKEVRFNIGTIHNTDVNLKEIKNVGIGIAKDIKISLITKNNSNISDFYINLLEKDGIIREYSIKNSQGNRMEGNVEKIKIECKDIFDNLYCTIYDVEEFKIKYKVYLKITKIQHNKKIINSDNKLLN
>CP017256.2|AOR25057.1|6734_6977_-|hypothetical-protein
MIGLVLTKVTNIFSFEFFKLIIAVLILSILFVFLSYIFKRSFYSFWKDMDKYSMDIRIIEKTIKSKQKIYIKRIGKYYSI
>CP017256.2|AOR25056.1|5733_5970_-|hypothetical-protein
MLVKNFTTSELGYESKWNKEELKELPYCMNISELYKNLIFNLVNLKSRENKEVNCFLERFNNIEKLKKVNKYFREKSL
>CP017256.2|AOR25055.1|3693_5643_-|site-specific-DNA-methyltransferase
MEKLKMKTKNKVNINIDSIGRLFPNTVTETIKGHDENNKLIIEKAIDFDILKQELSKFIVEGREERYQMNWPGKKEAILRANSSINKTLRPCKKESVDFDKTKNLYIEGDNLEVLKLLQETYLNKVKMIYIDPPYNTGNDSFVYPDNFTMSSDEFSEVSGQYDEDGNINYDIRKNSESNGKFHTDWLNMMYPRLKLAKDLLSDDGVIFISIDDNEVDNLKKICNEIYGEGNFVSCFTWIKKKKGSHLSKTVRNMTEYILCYSKYINNIELFGEDAYSDKWQPLAKRTNSQKVLEIPPNKVETKLVDGVYNSGRYGNGTSSLNFITNFKVSNGIIITEFKVEGPFVWTQNKLKEELKLGTRIALSTKYGFNVLRSNQKEKVKRPTTILNSKLGIGTNEDAYSESMELFGKEAIMSYPKPITLIKYLINTLGFYDDKMIILDFFSGSATTAHAVMQLNAENGGNRKFIMVQLPEETDKKSEAFKAGYKNICEIGKERIKRAGKKIKEENPDKADTLDIGFRVLKLDSSNMKDVYYNPNDYNQDMIEQLESNIKENRSSKDLLFQVMLDLGELLSSDIKEIQIEGKKVFNVGDGNIIACFDNDITNKVLSEIAKIQPLYAIFRDSSLSNDSVATNFEQIFKTYSPNTIRKVL
>CP017256.2|AOR25054.1|507_3681_-|restriction-endonuclease-subunit-R
MKFKFKIQDYQTKAVENVINVFKGQPFNDHVKYTRDLGIREKKNIIKYKDAEGNEKVVEKGSLFNVIDSEIKSKEIIEDYYNDIENSDGFENADLLLDDGEILKNIKNIQSMNNINLSNKLVKHLGRCSLDVEMETGTGKTYVYIKTIFELNKKYGFSKFIIVVPSIAIREGVKKTFEITEEHFMDNYHKKARYFVYDSKHLNNLDNFSKDSNINVMIINAQAFNARGKDARRIYEKLDEFQSRKPIDVISANRPILIMDEPQKLSGKATQESLKLFKPLFCLNYSATHKDQHNLVYVLDALDAYNERLVKKIEVKGFEVKNFRGTEKYLYLDEIIVSAKKPPRAKVELEIKYNKSINRESRVFAEGDNLYVTSNNMEQYKENFVINEINPINGSVTFTNGLVITKGEIVGDISEKDLRRIQIRETIASHFEKEEVLFNKGIKTLSLFFIDEVAKYRVYDENGEEQNSEYAQIFEEEYTNILNEYITLLDTPYVKYLKNINVKNTHKGYFSIDKKTKRIVDSVVKGKSTESDDITAYDLILKNKERLLSFEEPTRFIFSHSALREGWDNPNVFQICTLKHSDSTTQKRQEVGRGLRLCVDKNGNRVDLNYPGIEKNNIHNINKLTVIASESYKIFAEGLQKDIKANLYDRPKKATIEYFEGKKILINDEIIEINKKQAKEIYRYLIKNDYIDNDENINENYRTDLENHCIAKLPEALSLIEDEVQKLIQSVFDETAINNMMENANSTKVKDNELNNNFYKKEFQTLWNYINHKYVYTVQFESEELIKKSIEHINKKMFVSQLQYTLSKSEQKDNIDINELERGESFKNASSSTKILNHSEVSRIKYDLVGKVAEGTTLTRKSIVKILKGIEPNIFSMFKNNPEEFITKCIRLIKEQKATMIVNHITYNQIQGTYDSDIFTADDKGKNYSKAFLAKKHIKDYVFTDGTAEKSIERKFAEDIDDAYEVSVYAKLPRTFQIPTPVGNYSPDWAISFKEGSVKHIFFIAETKGTMESMNLREIEKAKISCAKKLFNELSTSNVKYHEVDSYQELLNVMNSL
>CP017256.2|AOR25059.1|9696_10341_-|hypothetical-protein
MKRYILLASIVTVVLVVSGCTNNKISNENMNNKSIAFTETTTNKEKSDLKNDDIIEEEKKLEASYEEKNGLKKPDIEEARDFEASLKNGSVIMISRDNSKELEVYNITNLDNFIDSFNKGKEGYVRIIKGSIIHNKFLVNKLDEYETDGKIVKSISYDAYSNKDKFTAGSPIYSPKIVKTYPDNSIRYAILESKDTPDNMGATVISFDKSSIKN
>CP017256.2|AOR25060.1|11556_12162_+|sigma-70-family-RNA-polymerase-sigma-factor
MNYKEIENTVTKAKNGDEEALLKLMIQFKPFIFKTARGFNIKNYDTYDLVQIGYIALINAVEKYKEGSNSFSSYVYISIKNCMKCTARNNKKHKNTLSINAPINEDGSLTDFTELLESNIDLEDDFIKKEKAREIQSIISKLDPKDLELIFLVYYNGFSFKEYALKKGLTYFQVIRRKNSIFKYIKNELLKSSEYKKVAEI
>CP017256.2|AOR25190.2|12196_13708_-|clostripain
MMTSENIKDVINTDVTTKEAVKYEDKVKNEDKKLTIMFYCDADNNLEPNLLLDLQEMKEGYVDNPNLNLIALVDRNDGYVDDSSVLGEDFSDTRMYKIERNKAIRIDGGDEFPEITKTSNYEGNMGDAHTLKKFIDSCKDQYPADKYALIVSNHGGGARDDKKEGVKNPKAVCWDETDNNDCLYTAEISDVLTDDESVDVLAYDACLMGTAEVAYQYRPGNGSFSANTMVASAPVVWGYGFDYKKIFSRLKSGGGDNGRKDSTLGGREKYFDPSKVTDLQLGAIMVEAQRDSVEKANVNSQALSCFDLSEIESVKDSVDELSRALWKEDKKTDIENIRGRNRNVHLINYFNQNSSREWMAYPYFDLYDLCKSITESNKFSDNIKDLAKKVMKNVDNTTVYSYAGSKFKGFTEGKNGLSIFLPDGSRWYTDSFSYMSFPCWQGQSWYNSIDTTNIKRNYLYGKLSWCKDGETAKINDVGNWFELLDSWFDTSNDKTGGLNRYQW
>CP017256.2|AOR25061.1|14490_15525_+|exopolysaccharide-biosynthesis-protein
MNTKKRKIVKKKDKNSKSKSKKQKKTLSNTILFLLFQFIFTAITFPILLLYGPFENVKTMYVGAAMTSMHHQYLAKWFLSDEEISKILKKSSCEVGDETTNIDEVKISKNKDDTIELYDITDNPKFKGHYLLVNDPKRIKIGVSSKLKTEGETTSEIAENNDAVAAINGGAFVDKTSVKWTGTGAYPNGIVISDGNTVWNSLDPDGKTELFGITKDGIMIVGKYSENELKKLGVQQALSFGPELIINGKKTNIIGGGGAGLAPRTAIGQKKDGTIILMVIEGRSIGSLGATYKEIQEIMYKLGAINAINLDGGKSTTMYYSGEIVNHVSNSMGERPIPTAVIVK
>CP017256.2|AOR25062.1|15542_16571_+|dipeptidyl-peptidase-IV
MKKIVVWVMLSLILQTSVLYILNNYVCVNSSEFKSKKSNINKYTSKDIKGSIPSDVKNVNLSYDGKYMTYLREKTLNIEDTRTGKSNEFKTENNEVVMCYTWLNNRNIIAIVEKVKKDGREKIQLITYDVKNDSKTFVQVICRYKENLEVENITTSVLTGVFYIHINKNRIQSMIYRIDRNNDLSEIDINAEVVDNMKAIQHEDRLVYENKLNNKIFATTPNKQLKFNSNNKLKLLDIDKNDVIYVGEINGDDITSVTYGKINEDISTWKKLNIDSPTNKDQLYCNNENQILINNNLEGYVKNLVNGKKVDYDGKFIQIIKDFIVSIDGDGKLIYIPYKDVL
>CP017256.2|AOR25063.1|17209_18130_-|tyrosine-recombinase-XerC
MNCNIPKILKNYLDYLSTIQERANSTVKGYKLDLIMLFKFLKNEDNMDNNIDISDIDKEFIRNIELEDLYSFLAFTKINKHNNAFTRARKVATIKSFFKYCQTKIKILDENVSLELETPKLPKKQVAYLSLGESEKLLKSICGRNKERDFCIITLFLNCGLRLNELCNIKLEDIRNDILVVRGKGDKDRTIYLNESCIKAIKEYMPNRKNVKNTYLFISERGNPICKRSVQTIVKNNIKAAGLDAHKYSTHKLRHTSATLLYKYGKVDIRSLQQILGHENISTTTIYTHVDDESIRNAIKSNPLNK
>CP017256.2|AOR25064.1|18360_18897_+|nitroreductase
MKEIENRRSIRKYKDQVVEKDKIQKMLESAMLAPSGSNTQPWDFIVITSKETKEKLAKANHNQEWMTKAPVMIACIADISSRIKDTRGICLNEQSPEFELKQIIRDTAIAIEHMVLQAEHLGLGTCWTAWFTQDEIRPILNIPNDKFVVCILTVGYADENPKQRPRKSLDKIVHYEKW
>CP017256.2|AOR25065.1|19839_20772_-|DUF4163-domain-containing-protein
MKRIYALILILVLSFGLISCADKEVSSNDIKEDNEVSNEFNNDNKENNDELNENKNEVKEASSNSDTVKNSTSSIENETKTDDSKKVVDEIKEKETSKNSTTKINEYEITSKNYTKNNVKINYPQIKNLSDSEKLKTINKDLQEGALKILDDYSEDDPNLTALTLNVNYEVKLKNKNYISVVYKGESNVKGAAHPASIFYTTNIDVEKGSSVRLSDYANIDDILKKLKGSKNIKVLAENDELAEAQRNFILNIEDNELIYMLKNADFYKINGKIQSPKEGAYSYLDKDGIVISVQVNHAIGDHSEFKLIN
>CP017256.2|AOR25066.1|21876_22401_+|N-acetyltransferase
MNLKNIQTNRLILIPITLEITKSLINGSSKEIEKFGIKCDKKWPTEDTMDILPIINNSLEKSKLPTGFETWMIVEKGNKRIIGDIGFHGRPNEKGEVEVGFGLVEHERGKGFGFESLNAIMDWLKFQESVNVIKAQCLINNKSSTRILEKAGLKEVNRDNELIYWEFINQHTNN
>CP017256.2|AOR25067.1|22633_23023_-|hypothetical-protein
MVRKKNPIKPVVAKPLNDNGKRNLVTNFVTTNVNKNTTENNTDKVTKKDTKNVTKKLTITKSILIGKKEITAKFTSNKRLRPNYNLSEDTIEKIEKISAILGYKKAEFLDIYLNGTLEKLIKKLEKDMK

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: CP017256_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP017256_2

44021-44108

Orphan

Consensus_repeat	Method
ATTTTTCCACTTAGATACGTAGAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP017256_2

>merge|CP017256|2|44021-44108|CRISPRCasFinder
ATTTTTCCACTTAGATACGTAGATTCTGTGCAAGGTCTGACGAAGGAATGCGACCTAGAGGGTATTTTTCCACTTAGATACGTAAATC

>CP017256|2|2|44021-44108|CRISPRCasFinder
ATTTTTCCACTTAGATACGTAGAT	TCTGTGCAAGGTCTGACGAAGGAATGCGACCTAGAGGGT
ATTTTTCCACTTAGATACGTAAATC

Protein	Signature genes	Signature genes Name	Protein_function
CP017256.2\|AOR25192.1\|52435_52615_-\|hypothetical-protein	unknown	unknown	unknown
CP017256.2\|AOR25191.1\|34896_35703_-\|bifunctional-hydroxymethylpyrimidine-kinase/phosphomethylpyrimidine-kinase	unknown	unknown	gnl\|CDD\|180561
CP017256.2\|AOR25083.1\|39369_40365_+\|serine-protease	unknown	unknown	gnl\|CDD\|349398
CP017256.2\|AOR25091.1\|50214_50826_-\|hypothetical-protein	unknown	unknown	unknown
CP017256.2\|AOR25082.1\|38739_38967_+\|hypothetical-protein	unknown	unknown	unknown
CP017256.2\|AOR25086.2\|45304_46234_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|366234
CP017256.2\|AOR25081.1\|37660_38569_-\|hypothetical-protein	unknown	unknown	unknown
CP017256.2\|AOR25092.1\|50846_51215_-\|hypothetical-protein	unknown	unknown	unknown
CP017256.2\|AOR25087.1\|46844_47171_-\|hypothetical-protein	unknown	unknown	unknown
CP017256.2\|AOR25078.1\|33319_34636_-\|phosphomethylpyrimidine-synthase	unknown	unknown	gnl\|CDD\|376689
CP017256.2\|AOR25079.1\|35834_36353_-\|energy-coupling-factor-transporter-S-component-ThiW	unknown	unknown	gnl\|CDD\|370540
CP017256.2\|AOR25080.1\|37217_37514_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274982
CP017256.2\|AOR25095.1\|51911_52439_-\|hypothetical-protein	unknown	unknown	unknown
CP017256.2\|AOR25090.1\|49663_50155_-\|hypothetical-protein	unknown	unknown	unknown
CP017256.2\|AOR25084.1\|41212_41743_+\|signal-peptidase-I	unknown	unknown	gnl\|CDD\|274044
CP017256.2\|AOR25089.1\|49120_49648_-\|hypothetical-protein	unknown	unknown	unknown
CP017256.2\|AOR25077.1\|32486_33317_-\|hydroxyethylthiazole-kinase	unknown	unknown	gnl\|CDD\|236477
CP017256.2\|AOR25085.1\|42842_43943_-\|hypothetical-protein	unknown	unknown	unknown
CP017256.2\|AOR25096.1\|53562_55077_-\|late-control-protein-D	unknown	unknown	gnl\|CDD\|368682
CP017256.2\|AOR25094.1\|51477_51789_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP017256.2\|AOR25078.1\|33319_34636_-\|phosphomethylpyrimidine-synthase	gnl\|CDD\|376689	pfam01964, ThiC_Rad_SAM, Radical SAM ThiC family. ThiC is found within the thiamine biosynthesis operon. ThiC is involved in pyrimidine biosynthesis. ThiC participates in the formation of 4-Amino-5-hydroxymethyl-2-methylpyrimidine from AIR, an intermediate in the de novo pyrimidine biosynthesis. Thic is a member of the radical SAM superfamily.	0
CP017256.2\|AOR25079.1\|35834_36353_-\|energy-coupling-factor-transporter-S-component-ThiW	gnl\|CDD\|370540	pfam09512, ThiW, Thiamine-precursor transporter protein (ThiW). Levels of thiamine pyrophosphate (TPP) or thiamine regulate transcription or translation of a number of thiamine biosynthesis, salvage, or transport genes in a wide range of prokaryotes. The mechanism involves direct binding, with no protein involved, to a structural element called THI found in the untranslated upstream region of thiamine metabolism gene operons. This element is called a riboswitch and is seen also for other metabolites such as FMN and glycine. This protein family consists of proteins identified in operons controlled by the THI riboswitch and designated ThiW. The hydrophobic nature of this protein and reconstructed metabolic background suggests that this protein acts in transport of a thiazole precursor of thiamine.	3.60863e-52
CP017256.2\|AOR25080.1\|37217_37514_+\|hypothetical-protein	gnl\|CDD\|274982	TIGR04104, hypothetical_protein, cxxc_20_cxxc protein. This small, uncommon, poorly conserved protein is found primarily in the Firmicutes. It features are pair of CxxC motifs separated by about 20 amino acids, followed by a highly hydrophobic region of about 45 amino acids. It has no conserved gene neighborhood, and its function is unknown.	1.01468e-11
CP017256.2\|AOR25083.1\|39369_40365_+\|serine-protease	gnl\|CDD\|349398	cd05379, CAP_bacterial, Bacterial CAP (cysteine-rich secretory proteins, antigen 5, and pathogenesis-related 1 proteins) domain proteins. Little is known about bacterial and archaeal members of the CAP (cysteine-rich secretory proteins, antigen 5, and pathogenesis-related 1 proteins) domain family. The wider family of CAP domain containing proteins includes plant pathogenesis-related protein 1 (PR-1), cysteine-rich secretory proteins (CRISPs), and allergen 5 from vespid venom, among others. Studies of eukaryotic proteins show that CAP domains have several functions, including the binding of cholesterol, lipids and heparan sulfate. This group includes Borrelia burgdorferi outer surface protein BB0689, which does not bind to cholesterol, lipids, or heparan sulfate, and whose function is unknown.	2.63863e-35
CP017256.2\|AOR25086.2\|45304_46234_+\|hypothetical-protein	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	3.17446e-22
CP017256.2\|AOR25084.1\|41212_41743_+\|signal-peptidase-I	gnl\|CDD\|274044	TIGR02227, Inactive_signal_peptidase_IA., signal peptidase I, bacterial type. This model represents signal peptidase I from most bacteria. Eukaryotic sequences are likely organellar. Several bacteria have multiple paralogs, but these represent isozymes of signal peptidase I. Virtually all known bacteria may be presumed to A related model finds a simlar protein in many archaea and a few bacteria, as well as a microsomal (endoplasmic reticulum) protein in eukaryotes. [Protein fate, Protein and peptide secretion and trafficking].	3.32287e-40
CP017256.2\|AOR25077.1\|32486_33317_-\|hydroxyethylthiazole-kinase	gnl\|CDD\|236477	PRK09355, PRK09355, hydroxyethylthiazole kinase; Validated.	9.32439e-127
CP017256.2\|AOR25191.1\|34896_35703_-\|bifunctional-hydroxymethylpyrimidine-kinase/phosphomethylpyrimidine-kinase	gnl\|CDD\|180561	PRK06427, PRK06427, bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase; Reviewed.	1.46483e-136
CP017256.2\|AOR25096.1\|53562_55077_-\|late-control-protein-D	gnl\|CDD\|368682	pfam05954, Phage_GPD, Phage late control gene D protein (GPD). This family includes a number of phage late control gene D proteins and related bacterial sequences. This family also includes Bacteriophage Mu P proteins and related sequences.	2.63403e-05

>CP017256.2|AOR25085.1|42842_43943_-|hypothetical-protein
MATKLYNSHLSKIIFECNEYYILDTYISLAYISSEVNSKYLIQTFSDSKADLINLVRRNMNASYKTIFNCIDKLIDKCILSFDKELNSWVLVDMENMTKSKYDSNDESYMDLTGYTNIRNFFFTEEFRKMKAREKRIIIYMAQLCDSKASKFHDSFSMNLLKPNSSWMKVLKTKCKYYAKYTINKMLTKYEHIFKDNSQNMRVKDLSPKKITNFKFYFQCPAVDNKVLEDEYIELVKLSNPKEYDLVKEKIKFAGITLTKKLIMHLVRAISNLKEWFLKERVAQLIINKYRAIQIHKSRENIKSLPAYAAAVVKSVVNEYKKFKEIQKTNNIRKYEYGEHFIEYTNNKADYDDDITFDIKKALALL
>CP017256.2|AOR25084.1|41212_41743_+|signal-peptidase-I
MKGQVKKNKKSIIKEWTINISVVATIAFLVWHFVGYSAWITSKSMMPTLEVKDRLLVARVHNFENLREGDIVLFKNDEFPDEILIKRLIGLPGDKIEIKHGVVFRNGEEIKENYVKNNIEYNRTFNVPENKFFFLGDNRAHSYDSRCWHYPFVDKSYIQGKAVLKYYPITNFEMFK
>CP017256.2|AOR25083.1|39369_40365_+|serine-protease
MKKAFLRRIIGGVVAVATITSLNPLGVSAAGKNNNCNITKSWSKVYGTWFCLGSNGEIKLEDYLNNYIKNNKTSCNLQFGWVKRPTKLNDSVIANNDSADTTAPEVNNGSNDTTVVENNNGSNDTTIPNTSEDNKGKDDITVPNVTEDNNGSNDVTTPNTNVNEGTTAPEKPVDKEENVQPTSGDSVNVSGLSKLPEKYSISIQSNAENKILQLMNEKRVQAGLQPLTMDNTLLKVARYKSNHMIQYNYFDHTNPDGTKWTNWLQAIGYKYNTTGENIAYNTYDPVELFNQWWNSKGHRDNMMNPAYNKVGIGVIYDKDNNKYMGTQTFSN
>CP017256.2|AOR25082.1|38739_38967_+|hypothetical-protein
MDFFKKNLFFILLFFIGLILIHKSVDLGRSYFVNYISRNQLSDPSKFNVLLDKSILKYIVIGSILSLFSIFKIKK
>CP017256.2|AOR25081.1|37660_38569_-|hypothetical-protein
MKRKLLFSEFIVTIIVSVLMFIGYYNNINIKVNADIKENIYIMYTDKDFKSTYSIYSTYSKSVKNIFFRENKNYSDFSIDEINNTIYYSELGNKKYDIYKLDLSDKDKKAVGLLGSDYGGDVFDLNNDKIIFRTLTKDRRSYTLGVYYLKDNEIKSWPNEDKDRYIFNFYWDKYNHAVYTIERSVNEMETQEKILHKIFKYDENGENKQLLYSTDKDINNISVNNQGSNIIFDVTIVENRMPINRIYLLNLNDNTEQILVESNDKFEHTNFTLVKKPKFSLNGNGFYFLGTTPKSKIIAEVK
>CP017256.2|AOR25080.1|37217_37514_+|hypothetical-protein
MKNICPNCNTRFKYKDIIKSTWSLKIKDLKCKKCLKEYKLSLCSILIISTLVNMPILIIYKIMLLIGGKATILLYIIWVSFIIAITPIFCNYKEVKNK
>CP017256.2|AOR25079.1|35834_36353_-|energy-coupling-factor-transporter-S-component-ThiW
MNEKCKAQKIALSGVLIGIASIFGTFSIPIGVAKISPIQHFVNVVGAIVLGPIYALGNAFIASLIRNILGTGSLLAFPGSMIGAFLAGVLYRKFKKKLVAVIGEVIGTGILGALVAYPIATVLLGKESALFVYVMPFTFSCSVGAIIAYVFLKVQVIEKFLITNKNIKSQRI
>CP017256.2|AOR25191.1|34896_35703_-|bifunctional-hydroxymethylpyrimidine-kinase/phosphomethylpyrimidine-kinase
MFRALTIAGSDSCGGAGIQADLKAFSANGAYGMSVITAITAQNTMGVFGIQDISPEMIKSQINVIFEDIRVDAIKIGMVSKIESIKAISSSLRNIKNLPLVVLDPVMISKSGFKLLSIDAKDTLVKELFPLTTLLTPNLPEAEEILMTEIKSLEDMKEAAQKLREFGPKYVLIKGGHLENEATDLLFDGEKFVFLPEERINTKHTHGTGCTLSSAIAANLAKGMNIEEAVKEGKRYITCAIEHGFELGKGVGPTNHFYELYKRAGIIE
>CP017256.2|AOR25078.1|33319_34636_-|phosphomethylpyrimidine-synthase
MNYKTQMKAAKKGIVTKEMKIVACKENMLEQELIKLVAEGKVVIPANINHKSLNPEGIGDGLRTKVNVNLGISGDSIDYCREMQKVKLAIDFGAEAIMDLSNYGKTQEFRTKLIEKSPAMIGTVPMYDAIGYLEKDLLDIKAEDFLNVVRAHAKQGVDFVTIHAGINKRTISLFKEDKRRMNIVSRGGSLLFAWMEMTGNENPFYEYYDELLEILREYDVTISLGDAMRPGCLDDSTDAGQVSELIELGLLTKRAWEKDVQVMIEGPGHMAMNEIAANMQIEKRLCHGAPFYVLGPLVTDIAPGYDHITSAIGGAIAATNGANFLCYVTPAEHLRLPDLNDVKEGVIAAKIAAHSADIANGIKGARDRDNKMADARQKLDWEEMFKIAIDGEKAKEYFESVPPESKHSCSMCGKMCAVRTTNRILNGEKVELLQNEVK
>CP017256.2|AOR25077.1|32486_33317_-|hydroxyethylthiazole-kinase
MSKEIVKKVCELLDDVRNKKPLVHNITNYVTVNDCANILLAIGASPIMADDIKESADITKISNALVINIGTLNERTIKSMIVSGKKANELNIPVVFDPVGAGASEFRNSITKKILEEIKINILRGNMSEVKFISGLKSTTKGVDASESDMKSGNEEGINIAKNLANKLNCIVAITGITDIVSDGECTVMLENGTKMLSNVTGTGCMSSALIGGFCGAGNDYFIGAIAGIISMGIAGEVSFEKSEKIGLGSFRVGIIDAISNMNSDIIVNMAKVQEI
>CP017256.2|AOR25086.2|45304_46234_+|hypothetical-protein
MKEDKRKTCIRPVPKNKLSKEEYQSVLNTVSRPEFADLPPSQIVPKLADKGIYIASESTFYRILRAENMQHHRMHTKPPERVKLQTTFIADGPNQVWTWDITWLNTYTRGIYYKLYMVIDIFSRKIVAWEVWTEENGELASELVERAMLSEKVKIKNNQKPLVLHSDNGAPMKSYTLKAKLEVLGVISSYSRPRVSNDNPFSEAQFKTMKYRPGYPKDGFATIEDAREWVSSFVNWYNNEHYHSGLKFMTPNSRHNGETESIMNNRIKVYEAARALNPSRFNKGIRNWTPPEKVALNPTDEIKDKLKIV
>CP017256.2|AOR25087.1|46844_47171_-|hypothetical-protein
MNLEEWLLRHNIKDMTMKDYNNYIYYYKQEEPEEYSTIFGNKNEDKINIIFHSVAYVINSWQEYDTDDGTYKYISSKIRLEYSDEEFAEYEVIYGLDGEYHDDYFRCI
>CP017256.2|AOR25089.1|49120_49648_-|hypothetical-protein
MESLDFNNISIRGRFVFSVDCLLKVINKFQLVSGLDTFVLNLLEFTSSSKLELWEMKIKLLLPEELNNNTLSYDLDYDEDIDVEEQQFLTDVFLEVLSVGMANLYKEFENDITLNHINNIVNLLNKNNIDLPSIDKIKFSKVSENDGWGNTFDCEIGYDDNYEYEMHYIVDIVNS
>CP017256.2|AOR25090.1|49663_50155_-|hypothetical-protein
MHKKEDFKDLNMLEEVAYSIACLEKLCLEWNIKSKKLVACIEIFWGFTKKDIDCWEEDIYSIKRNSKNIERYELNNIDEEKKQSIANIIDKILKISLTNLYTRYSYKSAVEDILSIEKELEKSKIDCPDLNDYMRNEKLRQSDFINLRYDKYNLTNSISFKEK
>CP017256.2|AOR25091.1|50214_50826_-|hypothetical-protein
MDYFRKCRYGKLSAEELNNYINLKQKVKDYIVANSKKLSKSNTTMVSKVWDTSKQKVSDSYIGLSGKKNLNKFLDNLQSQKNSMYLHEDIIEGIRELVARKGVEINEEALMHANKGYLTNADREYLSTILKDISQRPWNVLNCGDVRAVNEALIKGANKSDLMGASYNVGKQIFEMRCNNCEITTKGTQWYLQQAEPYKQNMY
>CP017256.2|AOR25092.1|50846_51215_-|hypothetical-protein
MEIWHSSTKVRIFESVDTESIDTISILYIGGIFSTEDKNDILEIMNYLKNVQFSERSNCNAPNTTPDVIIGLSDRDDHNILLLQIYGDLARVTPAQEIDYTIPDGFYREIESLCKKYEKNNK
>CP017256.2|AOR25094.1|51477_51789_-|hypothetical-protein
MKKKSTGALNIKGGSKDPLSINFEDEIGVTLTSPTGLNLNAGGEIIIRTKNNINISAQSQILMTKRNTENGVSIEDEFHIKGNNVIKNGSCIETYAPFEEGDE
>CP017256.2|AOR25095.1|51911_52439_-|hypothetical-protein
MKEIIKIIILTLLSIIIFLILIGTFAMTATVKKVTKDIKIIEGTKEPLDINTSEIYCEYIPGGELGDWVVIGQDGVLFHHDNKKLEEIIVIGNVPKEINHYILRNIFIFEGKYLGVKKVKGCNYDFKTFKAENWFINYPIKRIPAEKYYPKDGLSLLDILGEEVMPVREIVEDEN
>CP017256.2|AOR25192.1|52435_52615_-|hypothetical-protein
MEDRFRRRLKNEEFTMNGCENYPIKSSAYGSEHSQWKIYKAGEEPKNIDESQIKGEVVE
>CP017256.2|AOR25096.1|53562_55077_-|late-control-protein-D
MGEINRLRVKSPYELMKIADIKIENKPNEHGYLYLKCLIDDSINFNSAIKASTEDEICIYEELVDIDNENKSTSSDENTININEVNERNSIRLFNGIVQNIRTTNVNGIYYLEIQALTSSFKLDIKEKSRSFQNVDMTYDALINEILKDYSGYTFTQNIGKGQKIDKPLFQYKETDWNFLKRIASELKSELYCDIINLNNMFYFGILHEHSYELNDNMDYEAFKDIKKFHEAGGYNAGYDDTDYFYYEIKRRYIFHIGSEIYYKQKKLYIREYEAYKDKEEIFYKYRLCRKNGVWQSIIYNNLLNGATLEGKVLAVKEELIKLHLNIDENQSEEEAFWFRYAPPSVNIMYSMPIIGERARLYFPNQDGGEPIVTGCIRKNGDTCEGTSDTTNRYFASDHGSEIAMLPGALNIKGGSKEPLSINFEDETGVTLTSPTGLNLNAGGEIIIRTKNNINISAQSQILMTKGNTENGVSIEGEFHIKGNNVIKNGSCRETYAPFPEGDE

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Crispr_ID: CP017256_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP017256_3

44208-44294

Orphan

Consensus_repeat	Method
ATTTTTCCACTTAGATACGTAGAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP017256_3

>merge|CP017256|3|44208-44294|CRISPRCasFinder
ATTTTTCCACTTAGATACGTAAATCCTATGCAAGAGAAAGGGAATTTAAAAGGAATGAAGATATTTTTCCACTTAGATACGTAGATT

>CP017256|3|3|44208-44294|CRISPRCasFinder
ATTTTTCCACTTAGATACGTAAAT	CCTATGCAAGAGAAAGGGAATTTAAAAGGAATGAAGAT
ATTTTTCCACTTAGATACGTAGATT

Protein	Signature genes	Signature genes Name	Protein_function
CP017256.2\|AOR25192.1\|52435_52615_-\|hypothetical-protein	unknown	unknown	unknown
CP017256.2\|AOR25191.1\|34896_35703_-\|bifunctional-hydroxymethylpyrimidine-kinase/phosphomethylpyrimidine-kinase	unknown	unknown	gnl\|CDD\|180561
CP017256.2\|AOR25083.1\|39369_40365_+\|serine-protease	unknown	unknown	gnl\|CDD\|349398
CP017256.2\|AOR25091.1\|50214_50826_-\|hypothetical-protein	unknown	unknown	unknown
CP017256.2\|AOR25082.1\|38739_38967_+\|hypothetical-protein	unknown	unknown	unknown
CP017256.2\|AOR25086.2\|45304_46234_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|366234
CP017256.2\|AOR25081.1\|37660_38569_-\|hypothetical-protein	unknown	unknown	unknown
CP017256.2\|AOR25092.1\|50846_51215_-\|hypothetical-protein	unknown	unknown	unknown
CP017256.2\|AOR25087.1\|46844_47171_-\|hypothetical-protein	unknown	unknown	unknown
CP017256.2\|AOR25078.1\|33319_34636_-\|phosphomethylpyrimidine-synthase	unknown	unknown	gnl\|CDD\|376689
CP017256.2\|AOR25079.1\|35834_36353_-\|energy-coupling-factor-transporter-S-component-ThiW	unknown	unknown	gnl\|CDD\|370540
CP017256.2\|AOR25080.1\|37217_37514_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274982
CP017256.2\|AOR25095.1\|51911_52439_-\|hypothetical-protein	unknown	unknown	unknown
CP017256.2\|AOR25090.1\|49663_50155_-\|hypothetical-protein	unknown	unknown	unknown
CP017256.2\|AOR25084.1\|41212_41743_+\|signal-peptidase-I	unknown	unknown	gnl\|CDD\|274044
CP017256.2\|AOR25089.1\|49120_49648_-\|hypothetical-protein	unknown	unknown	unknown
CP017256.2\|AOR25077.1\|32486_33317_-\|hydroxyethylthiazole-kinase	unknown	unknown	gnl\|CDD\|236477
CP017256.2\|AOR25085.1\|42842_43943_-\|hypothetical-protein	unknown	unknown	unknown
CP017256.2\|AOR25096.1\|53562_55077_-\|late-control-protein-D	unknown	unknown	gnl\|CDD\|368682
CP017256.2\|AOR25094.1\|51477_51789_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP017256.2\|AOR25078.1\|33319_34636_-\|phosphomethylpyrimidine-synthase	gnl\|CDD\|376689	pfam01964, ThiC_Rad_SAM, Radical SAM ThiC family. ThiC is found within the thiamine biosynthesis operon. ThiC is involved in pyrimidine biosynthesis. ThiC participates in the formation of 4-Amino-5-hydroxymethyl-2-methylpyrimidine from AIR, an intermediate in the de novo pyrimidine biosynthesis. Thic is a member of the radical SAM superfamily.	0
CP017256.2\|AOR25079.1\|35834_36353_-\|energy-coupling-factor-transporter-S-component-ThiW	gnl\|CDD\|370540	pfam09512, ThiW, Thiamine-precursor transporter protein (ThiW). Levels of thiamine pyrophosphate (TPP) or thiamine regulate transcription or translation of a number of thiamine biosynthesis, salvage, or transport genes in a wide range of prokaryotes. The mechanism involves direct binding, with no protein involved, to a structural element called THI found in the untranslated upstream region of thiamine metabolism gene operons. This element is called a riboswitch and is seen also for other metabolites such as FMN and glycine. This protein family consists of proteins identified in operons controlled by the THI riboswitch and designated ThiW. The hydrophobic nature of this protein and reconstructed metabolic background suggests that this protein acts in transport of a thiazole precursor of thiamine.	3.60863e-52
CP017256.2\|AOR25080.1\|37217_37514_+\|hypothetical-protein	gnl\|CDD\|274982	TIGR04104, hypothetical_protein, cxxc_20_cxxc protein. This small, uncommon, poorly conserved protein is found primarily in the Firmicutes. It features are pair of CxxC motifs separated by about 20 amino acids, followed by a highly hydrophobic region of about 45 amino acids. It has no conserved gene neighborhood, and its function is unknown.	1.01468e-11
CP017256.2\|AOR25083.1\|39369_40365_+\|serine-protease	gnl\|CDD\|349398	cd05379, CAP_bacterial, Bacterial CAP (cysteine-rich secretory proteins, antigen 5, and pathogenesis-related 1 proteins) domain proteins. Little is known about bacterial and archaeal members of the CAP (cysteine-rich secretory proteins, antigen 5, and pathogenesis-related 1 proteins) domain family. The wider family of CAP domain containing proteins includes plant pathogenesis-related protein 1 (PR-1), cysteine-rich secretory proteins (CRISPs), and allergen 5 from vespid venom, among others. Studies of eukaryotic proteins show that CAP domains have several functions, including the binding of cholesterol, lipids and heparan sulfate. This group includes Borrelia burgdorferi outer surface protein BB0689, which does not bind to cholesterol, lipids, or heparan sulfate, and whose function is unknown.	2.63863e-35
CP017256.2\|AOR25086.2\|45304_46234_+\|hypothetical-protein	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	3.17446e-22
CP017256.2\|AOR25084.1\|41212_41743_+\|signal-peptidase-I	gnl\|CDD\|274044	TIGR02227, Inactive_signal_peptidase_IA., signal peptidase I, bacterial type. This model represents signal peptidase I from most bacteria. Eukaryotic sequences are likely organellar. Several bacteria have multiple paralogs, but these represent isozymes of signal peptidase I. Virtually all known bacteria may be presumed to A related model finds a simlar protein in many archaea and a few bacteria, as well as a microsomal (endoplasmic reticulum) protein in eukaryotes. [Protein fate, Protein and peptide secretion and trafficking].	3.32287e-40
CP017256.2\|AOR25077.1\|32486_33317_-\|hydroxyethylthiazole-kinase	gnl\|CDD\|236477	PRK09355, PRK09355, hydroxyethylthiazole kinase; Validated.	9.32439e-127
CP017256.2\|AOR25191.1\|34896_35703_-\|bifunctional-hydroxymethylpyrimidine-kinase/phosphomethylpyrimidine-kinase	gnl\|CDD\|180561	PRK06427, PRK06427, bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase; Reviewed.	1.46483e-136
CP017256.2\|AOR25096.1\|53562_55077_-\|late-control-protein-D	gnl\|CDD\|368682	pfam05954, Phage_GPD, Phage late control gene D protein (GPD). This family includes a number of phage late control gene D proteins and related bacterial sequences. This family also includes Bacteriophage Mu P proteins and related sequences.	2.63403e-05

>CP017256.2|AOR25085.1|42842_43943_-|hypothetical-protein
MATKLYNSHLSKIIFECNEYYILDTYISLAYISSEVNSKYLIQTFSDSKADLINLVRRNMNASYKTIFNCIDKLIDKCILSFDKELNSWVLVDMENMTKSKYDSNDESYMDLTGYTNIRNFFFTEEFRKMKAREKRIIIYMAQLCDSKASKFHDSFSMNLLKPNSSWMKVLKTKCKYYAKYTINKMLTKYEHIFKDNSQNMRVKDLSPKKITNFKFYFQCPAVDNKVLEDEYIELVKLSNPKEYDLVKEKIKFAGITLTKKLIMHLVRAISNLKEWFLKERVAQLIINKYRAIQIHKSRENIKSLPAYAAAVVKSVVNEYKKFKEIQKTNNIRKYEYGEHFIEYTNNKADYDDDITFDIKKALALL
>CP017256.2|AOR25084.1|41212_41743_+|signal-peptidase-I
MKGQVKKNKKSIIKEWTINISVVATIAFLVWHFVGYSAWITSKSMMPTLEVKDRLLVARVHNFENLREGDIVLFKNDEFPDEILIKRLIGLPGDKIEIKHGVVFRNGEEIKENYVKNNIEYNRTFNVPENKFFFLGDNRAHSYDSRCWHYPFVDKSYIQGKAVLKYYPITNFEMFK
>CP017256.2|AOR25083.1|39369_40365_+|serine-protease
MKKAFLRRIIGGVVAVATITSLNPLGVSAAGKNNNCNITKSWSKVYGTWFCLGSNGEIKLEDYLNNYIKNNKTSCNLQFGWVKRPTKLNDSVIANNDSADTTAPEVNNGSNDTTVVENNNGSNDTTIPNTSEDNKGKDDITVPNVTEDNNGSNDVTTPNTNVNEGTTAPEKPVDKEENVQPTSGDSVNVSGLSKLPEKYSISIQSNAENKILQLMNEKRVQAGLQPLTMDNTLLKVARYKSNHMIQYNYFDHTNPDGTKWTNWLQAIGYKYNTTGENIAYNTYDPVELFNQWWNSKGHRDNMMNPAYNKVGIGVIYDKDNNKYMGTQTFSN
>CP017256.2|AOR25082.1|38739_38967_+|hypothetical-protein
MDFFKKNLFFILLFFIGLILIHKSVDLGRSYFVNYISRNQLSDPSKFNVLLDKSILKYIVIGSILSLFSIFKIKK
>CP017256.2|AOR25081.1|37660_38569_-|hypothetical-protein
MKRKLLFSEFIVTIIVSVLMFIGYYNNINIKVNADIKENIYIMYTDKDFKSTYSIYSTYSKSVKNIFFRENKNYSDFSIDEINNTIYYSELGNKKYDIYKLDLSDKDKKAVGLLGSDYGGDVFDLNNDKIIFRTLTKDRRSYTLGVYYLKDNEIKSWPNEDKDRYIFNFYWDKYNHAVYTIERSVNEMETQEKILHKIFKYDENGENKQLLYSTDKDINNISVNNQGSNIIFDVTIVENRMPINRIYLLNLNDNTEQILVESNDKFEHTNFTLVKKPKFSLNGNGFYFLGTTPKSKIIAEVK
>CP017256.2|AOR25080.1|37217_37514_+|hypothetical-protein
MKNICPNCNTRFKYKDIIKSTWSLKIKDLKCKKCLKEYKLSLCSILIISTLVNMPILIIYKIMLLIGGKATILLYIIWVSFIIAITPIFCNYKEVKNK
>CP017256.2|AOR25079.1|35834_36353_-|energy-coupling-factor-transporter-S-component-ThiW
MNEKCKAQKIALSGVLIGIASIFGTFSIPIGVAKISPIQHFVNVVGAIVLGPIYALGNAFIASLIRNILGTGSLLAFPGSMIGAFLAGVLYRKFKKKLVAVIGEVIGTGILGALVAYPIATVLLGKESALFVYVMPFTFSCSVGAIIAYVFLKVQVIEKFLITNKNIKSQRI
>CP017256.2|AOR25191.1|34896_35703_-|bifunctional-hydroxymethylpyrimidine-kinase/phosphomethylpyrimidine-kinase
MFRALTIAGSDSCGGAGIQADLKAFSANGAYGMSVITAITAQNTMGVFGIQDISPEMIKSQINVIFEDIRVDAIKIGMVSKIESIKAISSSLRNIKNLPLVVLDPVMISKSGFKLLSIDAKDTLVKELFPLTTLLTPNLPEAEEILMTEIKSLEDMKEAAQKLREFGPKYVLIKGGHLENEATDLLFDGEKFVFLPEERINTKHTHGTGCTLSSAIAANLAKGMNIEEAVKEGKRYITCAIEHGFELGKGVGPTNHFYELYKRAGIIE
>CP017256.2|AOR25078.1|33319_34636_-|phosphomethylpyrimidine-synthase
MNYKTQMKAAKKGIVTKEMKIVACKENMLEQELIKLVAEGKVVIPANINHKSLNPEGIGDGLRTKVNVNLGISGDSIDYCREMQKVKLAIDFGAEAIMDLSNYGKTQEFRTKLIEKSPAMIGTVPMYDAIGYLEKDLLDIKAEDFLNVVRAHAKQGVDFVTIHAGINKRTISLFKEDKRRMNIVSRGGSLLFAWMEMTGNENPFYEYYDELLEILREYDVTISLGDAMRPGCLDDSTDAGQVSELIELGLLTKRAWEKDVQVMIEGPGHMAMNEIAANMQIEKRLCHGAPFYVLGPLVTDIAPGYDHITSAIGGAIAATNGANFLCYVTPAEHLRLPDLNDVKEGVIAAKIAAHSADIANGIKGARDRDNKMADARQKLDWEEMFKIAIDGEKAKEYFESVPPESKHSCSMCGKMCAVRTTNRILNGEKVELLQNEVK
>CP017256.2|AOR25077.1|32486_33317_-|hydroxyethylthiazole-kinase
MSKEIVKKVCELLDDVRNKKPLVHNITNYVTVNDCANILLAIGASPIMADDIKESADITKISNALVINIGTLNERTIKSMIVSGKKANELNIPVVFDPVGAGASEFRNSITKKILEEIKINILRGNMSEVKFISGLKSTTKGVDASESDMKSGNEEGINIAKNLANKLNCIVAITGITDIVSDGECTVMLENGTKMLSNVTGTGCMSSALIGGFCGAGNDYFIGAIAGIISMGIAGEVSFEKSEKIGLGSFRVGIIDAISNMNSDIIVNMAKVQEI
>CP017256.2|AOR25086.2|45304_46234_+|hypothetical-protein
MKEDKRKTCIRPVPKNKLSKEEYQSVLNTVSRPEFADLPPSQIVPKLADKGIYIASESTFYRILRAENMQHHRMHTKPPERVKLQTTFIADGPNQVWTWDITWLNTYTRGIYYKLYMVIDIFSRKIVAWEVWTEENGELASELVERAMLSEKVKIKNNQKPLVLHSDNGAPMKSYTLKAKLEVLGVISSYSRPRVSNDNPFSEAQFKTMKYRPGYPKDGFATIEDAREWVSSFVNWYNNEHYHSGLKFMTPNSRHNGETESIMNNRIKVYEAARALNPSRFNKGIRNWTPPEKVALNPTDEIKDKLKIV
>CP017256.2|AOR25087.1|46844_47171_-|hypothetical-protein
MNLEEWLLRHNIKDMTMKDYNNYIYYYKQEEPEEYSTIFGNKNEDKINIIFHSVAYVINSWQEYDTDDGTYKYISSKIRLEYSDEEFAEYEVIYGLDGEYHDDYFRCI
>CP017256.2|AOR25089.1|49120_49648_-|hypothetical-protein
MESLDFNNISIRGRFVFSVDCLLKVINKFQLVSGLDTFVLNLLEFTSSSKLELWEMKIKLLLPEELNNNTLSYDLDYDEDIDVEEQQFLTDVFLEVLSVGMANLYKEFENDITLNHINNIVNLLNKNNIDLPSIDKIKFSKVSENDGWGNTFDCEIGYDDNYEYEMHYIVDIVNS
>CP017256.2|AOR25090.1|49663_50155_-|hypothetical-protein
MHKKEDFKDLNMLEEVAYSIACLEKLCLEWNIKSKKLVACIEIFWGFTKKDIDCWEEDIYSIKRNSKNIERYELNNIDEEKKQSIANIIDKILKISLTNLYTRYSYKSAVEDILSIEKELEKSKIDCPDLNDYMRNEKLRQSDFINLRYDKYNLTNSISFKEK
>CP017256.2|AOR25091.1|50214_50826_-|hypothetical-protein
MDYFRKCRYGKLSAEELNNYINLKQKVKDYIVANSKKLSKSNTTMVSKVWDTSKQKVSDSYIGLSGKKNLNKFLDNLQSQKNSMYLHEDIIEGIRELVARKGVEINEEALMHANKGYLTNADREYLSTILKDISQRPWNVLNCGDVRAVNEALIKGANKSDLMGASYNVGKQIFEMRCNNCEITTKGTQWYLQQAEPYKQNMY
>CP017256.2|AOR25092.1|50846_51215_-|hypothetical-protein
MEIWHSSTKVRIFESVDTESIDTISILYIGGIFSTEDKNDILEIMNYLKNVQFSERSNCNAPNTTPDVIIGLSDRDDHNILLLQIYGDLARVTPAQEIDYTIPDGFYREIESLCKKYEKNNK
>CP017256.2|AOR25094.1|51477_51789_-|hypothetical-protein
MKKKSTGALNIKGGSKDPLSINFEDEIGVTLTSPTGLNLNAGGEIIIRTKNNINISAQSQILMTKRNTENGVSIEDEFHIKGNNVIKNGSCIETYAPFEEGDE
>CP017256.2|AOR25095.1|51911_52439_-|hypothetical-protein
MKEIIKIIILTLLSIIIFLILIGTFAMTATVKKVTKDIKIIEGTKEPLDINTSEIYCEYIPGGELGDWVVIGQDGVLFHHDNKKLEEIIVIGNVPKEINHYILRNIFIFEGKYLGVKKVKGCNYDFKTFKAENWFINYPIKRIPAEKYYPKDGLSLLDILGEEVMPVREIVEDEN
>CP017256.2|AOR25192.1|52435_52615_-|hypothetical-protein
MEDRFRRRLKNEEFTMNGCENYPIKSSAYGSEHSQWKIYKAGEEPKNIDESQIKGEVVE
>CP017256.2|AOR25096.1|53562_55077_-|late-control-protein-D
MGEINRLRVKSPYELMKIADIKIENKPNEHGYLYLKCLIDDSINFNSAIKASTEDEICIYEELVDIDNENKSTSSDENTININEVNERNSIRLFNGIVQNIRTTNVNGIYYLEIQALTSSFKLDIKEKSRSFQNVDMTYDALINEILKDYSGYTFTQNIGKGQKIDKPLFQYKETDWNFLKRIASELKSELYCDIINLNNMFYFGILHEHSYELNDNMDYEAFKDIKKFHEAGGYNAGYDDTDYFYYEIKRRYIFHIGSEIYYKQKKLYIREYEAYKDKEEIFYKYRLCRKNGVWQSIIYNNLLNGATLEGKVLAVKEELIKLHLNIDENQSEEEAFWFRYAPPSVNIMYSMPIIGERARLYFPNQDGGEPIVTGCIRKNGDTCEGTSDTTNRYFASDHGSEIAMLPGALNIKGGSKEPLSINFEDETGVTLTSPTGLNLNAGGEIIIRTKNNINISAQSQILMTKGNTENGVSIEGEFHIKGNNVIKNGSCRETYAPFPEGDE

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Crispr_ID: CP017256_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP017256_4

44365-44450

Orphan

Consensus_repeat	Method
ATTTTTCCACTTAGATACGTAGAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP017256_4

>merge|CP017256|4|44365-44450|CRISPRCasFinder
AATTTTCCACTGAAATATGTAGATTTTCTGCAAAAAAAGGACAATTTCCAGTTAAGTAAGGAAAAATTCCACTCAGATACGTAAAT

>CP017256|4|4|44365-44450|CRISPRCasFinder
AATTTTCCACTGAAATATGTAGAT	TTTCTGCAAAAAAAGGACAATTTCCAGTTAAGTAAGGA
AAAATTCCACTCAGATACGTAAAT

Protein	Signature genes	Signature genes Name	Protein_function
CP017256.2\|AOR25192.1\|52435_52615_-\|hypothetical-protein	unknown	unknown	unknown
CP017256.2\|AOR25191.1\|34896_35703_-\|bifunctional-hydroxymethylpyrimidine-kinase/phosphomethylpyrimidine-kinase	unknown	unknown	gnl\|CDD\|180561
CP017256.2\|AOR25083.1\|39369_40365_+\|serine-protease	unknown	unknown	gnl\|CDD\|349398
CP017256.2\|AOR25091.1\|50214_50826_-\|hypothetical-protein	unknown	unknown	unknown
CP017256.2\|AOR25082.1\|38739_38967_+\|hypothetical-protein	unknown	unknown	unknown
CP017256.2\|AOR25086.2\|45304_46234_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|366234
CP017256.2\|AOR25081.1\|37660_38569_-\|hypothetical-protein	unknown	unknown	unknown
CP017256.2\|AOR25092.1\|50846_51215_-\|hypothetical-protein	unknown	unknown	unknown
CP017256.2\|AOR25087.1\|46844_47171_-\|hypothetical-protein	unknown	unknown	unknown
CP017256.2\|AOR25078.1\|33319_34636_-\|phosphomethylpyrimidine-synthase	unknown	unknown	gnl\|CDD\|376689
CP017256.2\|AOR25079.1\|35834_36353_-\|energy-coupling-factor-transporter-S-component-ThiW	unknown	unknown	gnl\|CDD\|370540
CP017256.2\|AOR25080.1\|37217_37514_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274982
CP017256.2\|AOR25095.1\|51911_52439_-\|hypothetical-protein	unknown	unknown	unknown
CP017256.2\|AOR25090.1\|49663_50155_-\|hypothetical-protein	unknown	unknown	unknown
CP017256.2\|AOR25084.1\|41212_41743_+\|signal-peptidase-I	unknown	unknown	gnl\|CDD\|274044
CP017256.2\|AOR25089.1\|49120_49648_-\|hypothetical-protein	unknown	unknown	unknown
CP017256.2\|AOR25077.1\|32486_33317_-\|hydroxyethylthiazole-kinase	unknown	unknown	gnl\|CDD\|236477
CP017256.2\|AOR25085.1\|42842_43943_-\|hypothetical-protein	unknown	unknown	unknown
CP017256.2\|AOR25096.1\|53562_55077_-\|late-control-protein-D	unknown	unknown	gnl\|CDD\|368682
CP017256.2\|AOR25094.1\|51477_51789_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP017256.2\|AOR25078.1\|33319_34636_-\|phosphomethylpyrimidine-synthase	gnl\|CDD\|376689	pfam01964, ThiC_Rad_SAM, Radical SAM ThiC family. ThiC is found within the thiamine biosynthesis operon. ThiC is involved in pyrimidine biosynthesis. ThiC participates in the formation of 4-Amino-5-hydroxymethyl-2-methylpyrimidine from AIR, an intermediate in the de novo pyrimidine biosynthesis. Thic is a member of the radical SAM superfamily.	0
CP017256.2\|AOR25079.1\|35834_36353_-\|energy-coupling-factor-transporter-S-component-ThiW	gnl\|CDD\|370540	pfam09512, ThiW, Thiamine-precursor transporter protein (ThiW). Levels of thiamine pyrophosphate (TPP) or thiamine regulate transcription or translation of a number of thiamine biosynthesis, salvage, or transport genes in a wide range of prokaryotes. The mechanism involves direct binding, with no protein involved, to a structural element called THI found in the untranslated upstream region of thiamine metabolism gene operons. This element is called a riboswitch and is seen also for other metabolites such as FMN and glycine. This protein family consists of proteins identified in operons controlled by the THI riboswitch and designated ThiW. The hydrophobic nature of this protein and reconstructed metabolic background suggests that this protein acts in transport of a thiazole precursor of thiamine.	3.60863e-52
CP017256.2\|AOR25080.1\|37217_37514_+\|hypothetical-protein	gnl\|CDD\|274982	TIGR04104, hypothetical_protein, cxxc_20_cxxc protein. This small, uncommon, poorly conserved protein is found primarily in the Firmicutes. It features are pair of CxxC motifs separated by about 20 amino acids, followed by a highly hydrophobic region of about 45 amino acids. It has no conserved gene neighborhood, and its function is unknown.	1.01468e-11
CP017256.2\|AOR25083.1\|39369_40365_+\|serine-protease	gnl\|CDD\|349398	cd05379, CAP_bacterial, Bacterial CAP (cysteine-rich secretory proteins, antigen 5, and pathogenesis-related 1 proteins) domain proteins. Little is known about bacterial and archaeal members of the CAP (cysteine-rich secretory proteins, antigen 5, and pathogenesis-related 1 proteins) domain family. The wider family of CAP domain containing proteins includes plant pathogenesis-related protein 1 (PR-1), cysteine-rich secretory proteins (CRISPs), and allergen 5 from vespid venom, among others. Studies of eukaryotic proteins show that CAP domains have several functions, including the binding of cholesterol, lipids and heparan sulfate. This group includes Borrelia burgdorferi outer surface protein BB0689, which does not bind to cholesterol, lipids, or heparan sulfate, and whose function is unknown.	2.63863e-35
CP017256.2\|AOR25086.2\|45304_46234_+\|hypothetical-protein	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	3.17446e-22
CP017256.2\|AOR25084.1\|41212_41743_+\|signal-peptidase-I	gnl\|CDD\|274044	TIGR02227, Inactive_signal_peptidase_IA., signal peptidase I, bacterial type. This model represents signal peptidase I from most bacteria. Eukaryotic sequences are likely organellar. Several bacteria have multiple paralogs, but these represent isozymes of signal peptidase I. Virtually all known bacteria may be presumed to A related model finds a simlar protein in many archaea and a few bacteria, as well as a microsomal (endoplasmic reticulum) protein in eukaryotes. [Protein fate, Protein and peptide secretion and trafficking].	3.32287e-40
CP017256.2\|AOR25077.1\|32486_33317_-\|hydroxyethylthiazole-kinase	gnl\|CDD\|236477	PRK09355, PRK09355, hydroxyethylthiazole kinase; Validated.	9.32439e-127
CP017256.2\|AOR25191.1\|34896_35703_-\|bifunctional-hydroxymethylpyrimidine-kinase/phosphomethylpyrimidine-kinase	gnl\|CDD\|180561	PRK06427, PRK06427, bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase; Reviewed.	1.46483e-136
CP017256.2\|AOR25096.1\|53562_55077_-\|late-control-protein-D	gnl\|CDD\|368682	pfam05954, Phage_GPD, Phage late control gene D protein (GPD). This family includes a number of phage late control gene D proteins and related bacterial sequences. This family also includes Bacteriophage Mu P proteins and related sequences.	2.63403e-05

>CP017256.2|AOR25085.1|42842_43943_-|hypothetical-protein
MATKLYNSHLSKIIFECNEYYILDTYISLAYISSEVNSKYLIQTFSDSKADLINLVRRNMNASYKTIFNCIDKLIDKCILSFDKELNSWVLVDMENMTKSKYDSNDESYMDLTGYTNIRNFFFTEEFRKMKAREKRIIIYMAQLCDSKASKFHDSFSMNLLKPNSSWMKVLKTKCKYYAKYTINKMLTKYEHIFKDNSQNMRVKDLSPKKITNFKFYFQCPAVDNKVLEDEYIELVKLSNPKEYDLVKEKIKFAGITLTKKLIMHLVRAISNLKEWFLKERVAQLIINKYRAIQIHKSRENIKSLPAYAAAVVKSVVNEYKKFKEIQKTNNIRKYEYGEHFIEYTNNKADYDDDITFDIKKALALL
>CP017256.2|AOR25084.1|41212_41743_+|signal-peptidase-I
MKGQVKKNKKSIIKEWTINISVVATIAFLVWHFVGYSAWITSKSMMPTLEVKDRLLVARVHNFENLREGDIVLFKNDEFPDEILIKRLIGLPGDKIEIKHGVVFRNGEEIKENYVKNNIEYNRTFNVPENKFFFLGDNRAHSYDSRCWHYPFVDKSYIQGKAVLKYYPITNFEMFK
>CP017256.2|AOR25083.1|39369_40365_+|serine-protease
MKKAFLRRIIGGVVAVATITSLNPLGVSAAGKNNNCNITKSWSKVYGTWFCLGSNGEIKLEDYLNNYIKNNKTSCNLQFGWVKRPTKLNDSVIANNDSADTTAPEVNNGSNDTTVVENNNGSNDTTIPNTSEDNKGKDDITVPNVTEDNNGSNDVTTPNTNVNEGTTAPEKPVDKEENVQPTSGDSVNVSGLSKLPEKYSISIQSNAENKILQLMNEKRVQAGLQPLTMDNTLLKVARYKSNHMIQYNYFDHTNPDGTKWTNWLQAIGYKYNTTGENIAYNTYDPVELFNQWWNSKGHRDNMMNPAYNKVGIGVIYDKDNNKYMGTQTFSN
>CP017256.2|AOR25082.1|38739_38967_+|hypothetical-protein
MDFFKKNLFFILLFFIGLILIHKSVDLGRSYFVNYISRNQLSDPSKFNVLLDKSILKYIVIGSILSLFSIFKIKK
>CP017256.2|AOR25081.1|37660_38569_-|hypothetical-protein
MKRKLLFSEFIVTIIVSVLMFIGYYNNINIKVNADIKENIYIMYTDKDFKSTYSIYSTYSKSVKNIFFRENKNYSDFSIDEINNTIYYSELGNKKYDIYKLDLSDKDKKAVGLLGSDYGGDVFDLNNDKIIFRTLTKDRRSYTLGVYYLKDNEIKSWPNEDKDRYIFNFYWDKYNHAVYTIERSVNEMETQEKILHKIFKYDENGENKQLLYSTDKDINNISVNNQGSNIIFDVTIVENRMPINRIYLLNLNDNTEQILVESNDKFEHTNFTLVKKPKFSLNGNGFYFLGTTPKSKIIAEVK
>CP017256.2|AOR25080.1|37217_37514_+|hypothetical-protein
MKNICPNCNTRFKYKDIIKSTWSLKIKDLKCKKCLKEYKLSLCSILIISTLVNMPILIIYKIMLLIGGKATILLYIIWVSFIIAITPIFCNYKEVKNK
>CP017256.2|AOR25079.1|35834_36353_-|energy-coupling-factor-transporter-S-component-ThiW
MNEKCKAQKIALSGVLIGIASIFGTFSIPIGVAKISPIQHFVNVVGAIVLGPIYALGNAFIASLIRNILGTGSLLAFPGSMIGAFLAGVLYRKFKKKLVAVIGEVIGTGILGALVAYPIATVLLGKESALFVYVMPFTFSCSVGAIIAYVFLKVQVIEKFLITNKNIKSQRI
>CP017256.2|AOR25191.1|34896_35703_-|bifunctional-hydroxymethylpyrimidine-kinase/phosphomethylpyrimidine-kinase
MFRALTIAGSDSCGGAGIQADLKAFSANGAYGMSVITAITAQNTMGVFGIQDISPEMIKSQINVIFEDIRVDAIKIGMVSKIESIKAISSSLRNIKNLPLVVLDPVMISKSGFKLLSIDAKDTLVKELFPLTTLLTPNLPEAEEILMTEIKSLEDMKEAAQKLREFGPKYVLIKGGHLENEATDLLFDGEKFVFLPEERINTKHTHGTGCTLSSAIAANLAKGMNIEEAVKEGKRYITCAIEHGFELGKGVGPTNHFYELYKRAGIIE
>CP017256.2|AOR25078.1|33319_34636_-|phosphomethylpyrimidine-synthase
MNYKTQMKAAKKGIVTKEMKIVACKENMLEQELIKLVAEGKVVIPANINHKSLNPEGIGDGLRTKVNVNLGISGDSIDYCREMQKVKLAIDFGAEAIMDLSNYGKTQEFRTKLIEKSPAMIGTVPMYDAIGYLEKDLLDIKAEDFLNVVRAHAKQGVDFVTIHAGINKRTISLFKEDKRRMNIVSRGGSLLFAWMEMTGNENPFYEYYDELLEILREYDVTISLGDAMRPGCLDDSTDAGQVSELIELGLLTKRAWEKDVQVMIEGPGHMAMNEIAANMQIEKRLCHGAPFYVLGPLVTDIAPGYDHITSAIGGAIAATNGANFLCYVTPAEHLRLPDLNDVKEGVIAAKIAAHSADIANGIKGARDRDNKMADARQKLDWEEMFKIAIDGEKAKEYFESVPPESKHSCSMCGKMCAVRTTNRILNGEKVELLQNEVK
>CP017256.2|AOR25077.1|32486_33317_-|hydroxyethylthiazole-kinase
MSKEIVKKVCELLDDVRNKKPLVHNITNYVTVNDCANILLAIGASPIMADDIKESADITKISNALVINIGTLNERTIKSMIVSGKKANELNIPVVFDPVGAGASEFRNSITKKILEEIKINILRGNMSEVKFISGLKSTTKGVDASESDMKSGNEEGINIAKNLANKLNCIVAITGITDIVSDGECTVMLENGTKMLSNVTGTGCMSSALIGGFCGAGNDYFIGAIAGIISMGIAGEVSFEKSEKIGLGSFRVGIIDAISNMNSDIIVNMAKVQEI
>CP017256.2|AOR25086.2|45304_46234_+|hypothetical-protein
MKEDKRKTCIRPVPKNKLSKEEYQSVLNTVSRPEFADLPPSQIVPKLADKGIYIASESTFYRILRAENMQHHRMHTKPPERVKLQTTFIADGPNQVWTWDITWLNTYTRGIYYKLYMVIDIFSRKIVAWEVWTEENGELASELVERAMLSEKVKIKNNQKPLVLHSDNGAPMKSYTLKAKLEVLGVISSYSRPRVSNDNPFSEAQFKTMKYRPGYPKDGFATIEDAREWVSSFVNWYNNEHYHSGLKFMTPNSRHNGETESIMNNRIKVYEAARALNPSRFNKGIRNWTPPEKVALNPTDEIKDKLKIV
>CP017256.2|AOR25087.1|46844_47171_-|hypothetical-protein
MNLEEWLLRHNIKDMTMKDYNNYIYYYKQEEPEEYSTIFGNKNEDKINIIFHSVAYVINSWQEYDTDDGTYKYISSKIRLEYSDEEFAEYEVIYGLDGEYHDDYFRCI
>CP017256.2|AOR25089.1|49120_49648_-|hypothetical-protein
MESLDFNNISIRGRFVFSVDCLLKVINKFQLVSGLDTFVLNLLEFTSSSKLELWEMKIKLLLPEELNNNTLSYDLDYDEDIDVEEQQFLTDVFLEVLSVGMANLYKEFENDITLNHINNIVNLLNKNNIDLPSIDKIKFSKVSENDGWGNTFDCEIGYDDNYEYEMHYIVDIVNS
>CP017256.2|AOR25090.1|49663_50155_-|hypothetical-protein
MHKKEDFKDLNMLEEVAYSIACLEKLCLEWNIKSKKLVACIEIFWGFTKKDIDCWEEDIYSIKRNSKNIERYELNNIDEEKKQSIANIIDKILKISLTNLYTRYSYKSAVEDILSIEKELEKSKIDCPDLNDYMRNEKLRQSDFINLRYDKYNLTNSISFKEK
>CP017256.2|AOR25091.1|50214_50826_-|hypothetical-protein
MDYFRKCRYGKLSAEELNNYINLKQKVKDYIVANSKKLSKSNTTMVSKVWDTSKQKVSDSYIGLSGKKNLNKFLDNLQSQKNSMYLHEDIIEGIRELVARKGVEINEEALMHANKGYLTNADREYLSTILKDISQRPWNVLNCGDVRAVNEALIKGANKSDLMGASYNVGKQIFEMRCNNCEITTKGTQWYLQQAEPYKQNMY
>CP017256.2|AOR25092.1|50846_51215_-|hypothetical-protein
MEIWHSSTKVRIFESVDTESIDTISILYIGGIFSTEDKNDILEIMNYLKNVQFSERSNCNAPNTTPDVIIGLSDRDDHNILLLQIYGDLARVTPAQEIDYTIPDGFYREIESLCKKYEKNNK
>CP017256.2|AOR25094.1|51477_51789_-|hypothetical-protein
MKKKSTGALNIKGGSKDPLSINFEDEIGVTLTSPTGLNLNAGGEIIIRTKNNINISAQSQILMTKRNTENGVSIEDEFHIKGNNVIKNGSCIETYAPFEEGDE
>CP017256.2|AOR25095.1|51911_52439_-|hypothetical-protein
MKEIIKIIILTLLSIIIFLILIGTFAMTATVKKVTKDIKIIEGTKEPLDINTSEIYCEYIPGGELGDWVVIGQDGVLFHHDNKKLEEIIVIGNVPKEINHYILRNIFIFEGKYLGVKKVKGCNYDFKTFKAENWFINYPIKRIPAEKYYPKDGLSLLDILGEEVMPVREIVEDEN
>CP017256.2|AOR25192.1|52435_52615_-|hypothetical-protein
MEDRFRRRLKNEEFTMNGCENYPIKSSAYGSEHSQWKIYKAGEEPKNIDESQIKGEVVE
>CP017256.2|AOR25096.1|53562_55077_-|late-control-protein-D
MGEINRLRVKSPYELMKIADIKIENKPNEHGYLYLKCLIDDSINFNSAIKASTEDEICIYEELVDIDNENKSTSSDENTININEVNERNSIRLFNGIVQNIRTTNVNGIYYLEIQALTSSFKLDIKEKSRSFQNVDMTYDALINEILKDYSGYTFTQNIGKGQKIDKPLFQYKETDWNFLKRIASELKSELYCDIINLNNMFYFGILHEHSYELNDNMDYEAFKDIKKFHEAGGYNAGYDDTDYFYYEIKRRYIFHIGSEIYYKQKKLYIREYEAYKDKEEIFYKYRLCRKNGVWQSIIYNNLLNGATLEGKVLAVKEELIKLHLNIDENQSEEEAFWFRYAPPSVNIMYSMPIIGERARLYFPNQDGGEPIVTGCIRKNGDTCEGTSDTTNRYFASDHGSEIAMLPGALNIKGGSKEPLSINFEDETGVTLTSPTGLNLNAGGEIIIRTKNNINISAQSQILMTKGNTENGVSIEGEFHIKGNNVIKNGSCRETYAPFPEGDE

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Crispr_ID: CP017256_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP017256_5

149943-150104

Orphan

II-B

Consensus_repeat	Method
ATTTAAATACATCTCATGTTAAGGTTAAAC	PILER-CR
ATTTAAATACATCTCATGTTAAGGTTAAAC	CRISPRCasFinder

2 spacers

WYL

The CRISPR arrays of CP017256_5

>merge|CP017256|5|149943-150104|PILER-CR,CRISPRCasFinder
ATTTACATACATCTCATGTTAAGGTTAAACGCCTTGGCTATTTGGATTAGTAAGGGAGGCATTTTAAATTTAAATACATCTCATGTTAAGGTTAAACTCTCTAACACATTATTCATTAACTTTATCTAGTGGATTTAAATACATCTCATATTAAGGTTAAAC

>CP017256|5|2|149943-150104|PILER-CR
ATTTACATACATCTCATGTTAAGGTTAAAC	GCCTTGGCTATTTGGATTAGTAAGGGAGGCATTTTAA
ATTTAAATACATCTCATGTTAAGGTTAAAC	TCTCTAACACATTATTCATTAACTTTATCTAGTGG
ATTTAAATACATCTCATATTAAGGTTAAAC

>CP017256|5|5|149943-150104|CRISPRCasFinder
ATTTACATACATCTCATGTTAAGGTTAAAC	GCCTTGGCTATTTGGATTAGTAAGGGAGGCATTTTAA
ATTTAAATACATCTCATGTTAAGGTTAAAC	TCTCTAACACATTATTCATTAACTTTATCTAGTGG
ATTTAAATACATCTCATATTAAGGTTAAAC

Protein	Signature genes	Signature genes Name	Protein_function
CP017256.2\|AOR25188.1\|162302_162653_-\|transposase	unknown	unknown	gnl\|CDD\|377551
CP017256.2\|AOR25184.1\|154445_155018_-\|ATPase	unknown	unknown	gnl\|CDD\|226648
CP017256.2\|AOR25179.1\|144881_145628_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
CP017256.2\|AOR25181.1\|147848_148652_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372574
CP017256.2\|AOR25175.1\|138754_140317_+\|AAA-family-ATPase	unknown	unknown	unknown
CP017256.2\|AUO15662.1\|155023_155197_-\|hypothetical-protein	unknown	unknown	unknown
CP017256.2\|AOR25180.1\|146689_147445_-\|N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
CP017256.2\|AOR25182.1\|150445_150670_-\|hypothetical-protein	unknown	unknown	unknown
CP017256.2\|AOR25198.2\|160581_162192_-\|IS66-family-transposase	unknown	unknown	gnl\|CDD\|376980
CP017256.2\|AOR25185.1\|157658_158132_-\|hypothetical-protein	unknown	unknown	unknown
CP017256.2\|AOR25186.1\|158428_159055_-\|glutamine-amidotransferase	unknown	unknown	gnl\|CDD\|153234
CP017256.2\|AOR25174.1\|137447_138248_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|213235
CP017256.2\|AOR25187.1\|159458_160373_-\|transcriptional-regulator	WYL	COG2378_WYL_CAS-I:CAS-III	gnl\|CDD\|225253
CP017256.2\|AOR25183.1\|151040_152054_+\|hypothetical-protein	unknown	unknown	unknown
CP017256.2\|AOR25177.1\|141656_142313_+\|DUF1311-domain-containing-protein	unknown	unknown	gnl\|CDD\|377758
CP017256.2\|AOR25178.1\|142416_143631_-\|serine/threonine-transporter-SstT	unknown	unknown	gnl\|CDD\|184190
CP017256.2\|AOR25196.1\|144506_144716_-\|hypothetical-protein	unknown	unknown	unknown
CP017256.2\|AOR25176.1\|140531_141179_-\|chloramphenicol-acetyltransferase-CAT	unknown	unknown	gnl\|CDD\|215002
CP017256.2\|AOR25197.1\|156517_157069_-\|hypothetical-protein	unknown	unknown	unknown
CP017256.2\|AUO15661.1\|146042_146237_+\|DUF2892-domain-containing-protein	unknown	unknown	gnl\|CDD\|378561

Protein	Function_ID	Function_description	E-value
CP017256.2\|AOR25188.1\|162302_162653_-\|transposase	gnl\|CDD\|377551	pfam05717, TnpB_IS66, IS66 Orf2 like protein. This protein is found in insertion sequences related to IS66. The function of these proteins is uncertain, but they are probably essential for transposition.	9.4425e-45
CP017256.2\|AOR25184.1\|154445_155018_-\|ATPase	gnl\|CDD\|226648	COG4185, COG4185, Uncharacterized protein conserved in bacteria [Function unknown].	2.84736e-65
CP017256.2\|AOR25179.1\|144881_145628_-\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	3.34711e-18
CP017256.2\|AOR25181.1\|147848_148652_-\|hypothetical-protein	gnl\|CDD\|372574	pfam13349, DUF4097, Putative adhesin. This has a putative all-beta structure with a twenty-residue repeat with a highly conserved repeating GD, gly-asp, motif. It may form part of a bacterial adhesin.	6.29687e-09
CP017256.2\|AOR25180.1\|146689_147445_-\|N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	7.24414e-08
CP017256.2\|AOR25186.1\|158428_159055_-\|glutamine-amidotransferase	gnl\|CDD\|153234	cd03140, GATase1_PfpI_3, Type 1 glutamine amidotransferase (GATase1)-like domain found in a subgroup of proteins similar to PfpI from Pyrococcus furiosus. Type 1 glutamine amidotransferase (GATase1)-like domain found in a subgroup of proteins similar to PfpI from Pyrococcus furiosus. PfpI is an ATP-independent intracellular proteases which may hydrolyze small peptides to provide a nutritional source. Only Cys of the catalytic triad typical of GATase1 domains is conserved in this group. This Cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow.	3.22085e-55
CP017256.2\|AOR25174.1\|137447_138248_-\|hypothetical-protein	gnl\|CDD\|213235	cd03268, ABC_BcrA_bacitracin_resist, ATP-binding cassette domain of the bacitracin-resistance transporter. The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multi-enzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.	6.09194e-77
CP017256.2\|AOR25187.1\|159458_160373_-\|transcriptional-regulator	gnl\|CDD\|225253	COG2378, COG2378, Predicted transcriptional regulator [Transcription].	2.69486e-39
CP017256.2\|AOR25198.2\|160581_162192_-\|IS66-family-transposase	gnl\|CDD\|376980	pfam03050, DDE_Tnp_IS66, Transposase IS66 family. Transposase proteins are necessary for efficient DNA transposition. This family includes IS66 from Agrobacterium tumefaciens.	6.90651e-108
CP017256.2\|AOR25177.1\|141656_142313_+\|DUF1311-domain-containing-protein	gnl\|CDD\|377758	pfam07007, LprI, Lysozyme inhibitor LprI. This family consists of several bacterial proteins of around 120 residues in length. Members of this family contain four highly conserved cysteine residues. Family members include lipoprotein LprI from Mycobacterium, which binds to and inhibits macrophage lysozyme, which may aid bacterial survival.	3.55617e-12
CP017256.2\|AOR25178.1\|142416_143631_-\|serine/threonine-transporter-SstT	gnl\|CDD\|184190	PRK13628, PRK13628, serine/threonine transporter SstT; Provisional.	0
CP017256.2\|AOR25176.1\|140531_141179_-\|chloramphenicol-acetyltransferase-CAT	gnl\|CDD\|215002	smart01059, CAT, Chloramphenicol acetyltransferase. Chloramphenicol acetyltransferase (CAT).catalyzes the acetyl-CoA dependent acetylation of chloramphenicol (Cm), an antibiotic which inhibits prokaryotic peptidyltransferase activity. Acetylation of Cm by CAT inactivates the antibiotic. A histidine residue, located in the C-terminal section of the enzyme, plays a central role in its catalytic mechanism. There is a second family of CAT. evolutionary unrelated to the main family described above. These CAT belong to the bacterial hexapeptide-repeat containing-transferases family (see ). The crystal structure of the type III enzyme from Escherichia coli with chloramphenicol bound has been determined. CAT is a trimer of identical subunits (monomer Mr 25,000) and the trimeric structure is stabilised by a number of hydrogen bonds, some of which result in the extension of a beta-sheet across the subunit interface. Chloramphenicol binds in a deep pocket located at the boundary between adjacent subunits of the trimer, such that the majority of residues forming the binding pocket belong to one subunit while the catalytically essential histidine belongs to the adjacent subunit. His195 is appropriately positioned to act as a general base catalyst in the reaction, and the required tautomeric stabilisation is provided by an unusual interaction with a main-chain carbonyl oxygen.	1.16503e-62
CP017256.2\|AUO15661.1\|146042_146237_+\|DUF2892-domain-containing-protein	gnl\|CDD\|378561	pfam11127, DUF2892, Protein of unknown function (DUF2892). This family is conserved in bacteria. The function is not known.	2.20778e-14

>CP017256.2|AOR25181.1|147848_148652_-|hypothetical-protein
MKKVLILAIVGIVLISSIGCNINSKTKNTISNQENETLNKNKVIDEKINLDNATDIDIEICAAKVSIKNYDGEEVKVTGELSEKSKDLDINKNGNKIQIIEKRDKLKGLDMDAESNGSKFDILVPSKFNGNFVFEQGAGTVDIEGIKVKNIDISGGSVKSKCEDIKFDKLNLDSGAGNFDLNLKEKCGDIKIKGGVGKLNLKMAEVGGNLKYEGGVGDIDITIPVNSPVKLLAEKGLGHCNIDAKTSGEETYTFDLEVGVGLINVRN
>CP017256.2|AOR25180.1|146689_147445_-|N-acetyltransferase
MYTKTEILEIAKSQLALDYNCQLSDFEKEKNTIVEKNMMDGRRIYGNDGCFLKILCFGGRAIISTAPRIIPWCKEKLLNRNAAWLFEYPKLRLIDKKLQEFGHEIADIHHYYLPNPNVMCIEPITNVKWYEYEDILQFNNDDRFREALGFDENNPDVLAVAAYDGDNIMGMAGASSDSKTMWQIGIDVLPEYRGRGIGTNLVTLLKNEIFKRGKIPFYGTVESHFHSQNIAINAGFFPAWAELYSKTKSNI
>CP017256.2|AUO15661.1|146042_146237_+|DUF2892-domain-containing-protein
MKCNVGRTEQIIRIVIGISIVLIGLYFRNWWGIIGLVPIITGSIRYCPISNILRISTCDIKEKQ
>CP017256.2|AOR25179.1|144881_145628_-|alpha/beta-hydrolase
MSYFKYKNFNIYYKVYGEGKPLVIIHGDTASSKMFIPELKFYSKNFKVILLDLVGQGKSQRVNDLPLNYWNFNAMLVIELCKYIGISDVNLLGTSGGAIIALNAVLEEPALFNKIIVDSFMGENLSYEFAKKILYDRKIAKSKLSSKLFWFMMHGFDWKNVIDQNTNLIINFSSNRGNFFDCNLSNIKNDTLITGSLKDDLIPNIESILKSINLKIENSKLIIFKNGNHPAMFSNKKEFRNLVLNFLN
>CP017256.2|AOR25196.1|144506_144716_-|hypothetical-protein
MFLIIINKKSNNKKIKKIAQILNTSSIIIAIFFAFEAIDGFNRKLKLIGLMMIIFSGFMKGILKKLKIT
>CP017256.2|AOR25178.1|142416_143631_-|serine/threonine-transporter-SstT
MKKLIEKWNNISLIKRIIFGLILGIIFALTIPDLGAPISIFGSLFVGALKAIAPILVFFLVIAALSQYKEGKKTNMKSVILLYLLGTLSAGVVGVIGSFLFPVKLVFTTSVDNLKPPSGVGEVLNNLLMNIVSNPVSALSNANYIGILFWAVILGLALKNANEGSKKVIANLSDAISQVVRWIINLAPFGIMGLVFDSISKQGVESLIKYGQLILVLVGCMAFFALVINPIITFILIHKNPYPLVIKCLKNSGITAFFTRSSAANIPVNMALCKELGLNEDTYSISIPLGATINMGGAALTISVLTLAATNTLGITVDIGTAIILVLLAAVSACGTSGVAGGSLLLVPLACSLFGIPNDIAMQVVGVGFIIGVIQDSCETALNSSTDVLYTAVAEFAQRRKLKP
>CP017256.2|AOR25177.1|141656_142313_+|DUF1311-domain-containing-protein
MKQKAILCLVLIGLTSFNFIGCTNSDKNITSKNEQQENISTEDSETKTDNNSDTETDKAKNNTDNNINKSSQNSNKEVNNKKTEKSVKENNNNAKKTQQSTKQIYKNKLNNIELGMKDLDEKDATGINMTMISAATERNKRWDDALNEIYGVLKEQLSSDDMKKLENEEIKWISYRDDKAKNDSSPYKGGSIYSYIYTSSLAETTKERCYKLVEKYMK
>CP017256.2|AOR25176.1|140531_141179_-|chloramphenicol-acetyltransferase-CAT
MGFNIINMDTWDRKDCFNHFFNNAKCTYSVTINIDITNLYNYIRTNKLRFYPTFTWVVSKAINNYQEFKMTFDKEGRLGFFDEIGPSYSVLNDRTKVMSDLYTSFNNVFLSFYENMVNALNSYKEDTNFTTQFQNNFFIVSCLPWFTYTSFNVNNEGSSPFLFPMVTWGKFFEEGNKIIMPVTIQVHHAVADGYHCSLFFSDVKEISLNPEQYLK
>CP017256.2|AOR25175.1|138754_140317_+|AAA-family-ATPase
MKRRFNSTGVCVPRKHYMVDISNKLIQIKELIDNEFYFNMHKPRQYGKTTTLNELKKFLNNEYLVISISFEGIGDSVFENEKSFCNKFLKIMSRSLSFSDNEESQRLLKLSEGIKDLEETSEVITKFISGAKKEVVLFIDEVDKSSNNQLFLSFIGMLRNKYLLRELEEDFTFKSVILSGLYDVKSLKLKLRKEEETKYNSPWNIAVDFDVDMSFSPKEISTMLNEYSNENNIAMDINAISEELYFFTNGYPYLVSRLCQIIDEKIKKNLKETWTKKDVQKAIKIINEDVNTLFESIVKNLENNNELYELTKKILIDGEQIVFNPLNPIINIGVTYGIFKKGNDRLEISNKIFEDVIYSYMISKIVTTANNMSLYNIKSKFIKENGELNIEKILKRFQQFMKEQYSSKDREFIEHHGRLLFLAFMKPIINGTGFDFKEVQISEEKRLDLVITYNSFKYIIEMKIWRGPKYHEEGINQLCDYLDIHGLNNGYLLVFNFNKNKEYKEEKIQINNKNIISVYV
>CP017256.2|AOR25174.1|137447_138248_-|hypothetical-protein
MIKLKHINKYYGDFHVTKDLNLHVKKGEIYGLIGKNGAGKTTIFKIILGLSDFSDGELSIKNSKNYSELLANRKKIGFFIGKNFFDYLDAKENLQYYRKLKGIKDKKEVERVLKIVGLNTTKAKYKSFSMGMKQRLGIANALLGNPEILILDEPTNGLDPQGIVDIRNLVKKLNHEYGMTIIVSSHILGELEHTANRFGIVHEGKVLREITLDDLKSESDTIEISVNDIDRAREILKSNNIEILAEKSSAKTLEDYYFELVGGKIK
>CP017256.2|AOR25182.1|150445_150670_-|hypothetical-protein
MCAFNIRSIKLRNYSCKGSLNKLNRFVKQYDNKSITNNVIINDTLKVTKIVTIKDIKFVTKKVTNNITIVKLLY
>CP017256.2|AOR25183.1|151040_152054_+|hypothetical-protein
MDLTKKGNTIGLFSGLTWGLYTIILYTVLNLYANAKGDLLSLKGIMLILITTVLISLVDLFFNIVFELILLSKKNLINEFKSVLFSKKGFGVIPAAILAGPFGLIPYAIASTISAPVAGAFSALYPVVGAVTSFLVFKEKLPKLKIIGGIMAVLGVMATYQLQTVSLIVYIIALIPAFGWGLEAIFGYKLIKDDINPIVTITIRHIYSIVILGICLLVFLLISGEYSYIVEFYSGIQYSDMFAYINKSLILPTFIIGSFIGGASYILWYVSMKYISVAPAMILNITYVLWIPIILMLPPFSQTISPNVLLGCTIIFFGTSLVIIGDTIKAKSRKKVN
>CP017256.2|AOR25184.1|154445_155018_-|ATPase
MKRYTLFAGVNGSGKTSIYKSVFFNEDYIGKRINTDEMVARIGSWQDNNLQIKVAREAVKMINYYINNEISFHQETTLSGKSILTNISKAKEKGFYVVMNYIGVKNSEIAKERVKIRVSKGGHGIPDDVIEKRYSNSLINLEEAIKICDEVNIYDNTHEFIELINIKSGKLIWKNNIMQEWAKTILEYLN
>CP017256.2|AUO15662.1|155023_155197_-|hypothetical-protein
MESNKENINLYNQFLKYSYSELKELFNQAKTKEEQDFYMSMANLVLQREQRRVINEM
>CP017256.2|AOR25197.1|156517_157069_-|hypothetical-protein
MNYIKIINALKNKGIIFEKGLSKQEFNMIENFYGVNFPPDLKEFLSLALPISNKFINWRDMSEDNIKKIQDKLEWPLEGIIFDIENNNFWYKNWGNKPDNFEEAIDICKKEMKKVPKLIPICSHRYIPSEPNESGNPIFSIYQTDIIYYGEDLLSYLQLEFNMKKYEDIDFDLIKEIKFWVDL
>CP017256.2|AOR25185.1|157658_158132_-|hypothetical-protein
MMNVFFEDEEITENDLYFMCYIIERIARTLHTRNKEVVNTIGYDELVKKISLANVLHCENPLKVVDDWIKEYDLKKGDFNILDVDKELVEKVPSETQMGKVYKRLILNTLEPNEDYIQGLIRVYNAKICDIIDDYNSSAYYEPLPTIVRSYYNSSFN
>CP017256.2|AOR25186.1|158428_159055_-|glutamine-amidotransferase
MKKIIYLYILESMAEWEVGYILQAISMESMLKKQNREFVIKTVGMSKNPIQTIGGLTITPDCLLDEIDENNIVALLLPGAETWNNEENNQILQKALSYIDKGILVGAICGATLPLADLKVLDKFKHTSNSLDYLTLFSKQYSGKKLYVNCPAVVDCNLITASSSGGLLWAKHIIQYLKVFPCEIIESWYNYYFTGDHIYYTELISQSI
>CP017256.2|AOR25187.1|159458_160373_-|transcriptional-regulator
MKIERLLGILFYLINRNNVSGNSLAEYFNVSRRTIIRDINTLTLAGVPIYSEMGSKGGYSINPDYKLNEKIIDNDNFGYILLALQSLKSVYGEKKVHETYEKVKHIYSDENNNHALNVDFSVVNENKSVISYISMLKEAVQHNKTVLFQYTNLNSNTRRVKCNIIHVFYKWYSWYAFGYDLEKSDFRMFKIVRMRKLEISEEYFDNNYDVAKLVDDYEEKRNKDNIYVTIEYSKEIDALINEYFRGDVINVLETSIVKKVAIKENDFIMFSIILGFGEKIKVLSPLSYQQRIKEHLKNTLIKNY
>CP017256.2|AOR25198.2|160581_162192_-|IS66-family-transposase
MDGLNLNNQLDEKTQLLISKMEREIELKDSEIQNLKTELAFLKGQILNKNRKIFGKSSEQVDSNQMSLFDDAENNCDFKMAEPTMEEIAYTRTKSSKHIGKKDNLANLERIIVEHKLEENEAICSKCNNSLVVIGRKSKEVLKYIPAKLYIEEHITYSYACKSCEAEAGVANIISTKLPNTIFYKSMASNELVAHVINMKYQHAMPLYRLETYFKMLGANLSRQTLSNWIMNSATELQVVYDIMKEQLLKKNYIQADETTVQVINDSGKDSKSKKYMWLYKSGALKDPIILYDYQNTRSSSCPKEFLKGFSGYLQTDGYTGYNRVENVKRLYCLAHIRRKYHEIIVNLDEEALKKSRAIIGFNYCEKLYKIEKDLRETYSKDEDYYKKRYKIRLKKSAPILNEFQEYVEREIKNALPKSPLGKALDYTRKLLSDMKTLLEDGSLEIDNNGAERAIKPFVIGRKNWLFSNTAKGAKSSALIYSIIETAKANGLIVEKYLVYLFDMLANTESKEKETLNNYMPWSKALPDVLRIKVGK
>CP017256.2|AOR25188.1|162302_162653_-|transposase
MLNIDKVDTVYLACGITDLRKSIDGLVMIVQTQLKLDPFEKALFVFCNRSMNRLKILHFDEGFWLYYHRLENNRLKWPMTKEEAMKVNKEELSWLLKGYEVRTTSKFKPIKEKNCY

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Crispr_ID: CP017256_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP017256_6

154046-154173

Orphan

II-B

Consensus_repeat	Method
ATTTAAATACATCCCATGTTAAGGTTAAAC	CRISPRCasFinder
CTAATACATCTCATGTTAAGGTTAAAC	PILER-CR

2 spacers

WYL

The CRISPR arrays of CP017256_6

>merge|CP017256|6|154046-154173|CRISPRCasFinder,PILER-CR
TTTTAAATACATCTCATGTTAAGGTTAAACAGTGTCTATGAACTTTATTATACAACTAATACATCTCATGTTAAGGTTAAACGTATCTTCTACGCTAGAACCTAATACAGCTCATGTTAAGGTTAAAC

>CP017256|6|6|154046-154128|CRISPRCasFinder
TTTTAAATACATCTCATGTTAAGGTTAAAC	AGTGTCTATGAACTTTATTATA
CAACTAATACATCTCATGTTAAGGTTAAACG

>CP017256|6|3|154051-154173|PILER-CR
AATACATCTCATGTTAAGGTTAAACAG	TGTCTATGAACTTTATTATACAACT
AATACATCTCATGTTAAGGTTAAACGT	ATCTTCTACGCTAGAACCT
AATACAGCTCATGTTAAGGTTAAAC

Protein	Signature genes	Signature genes Name	Protein_function
CP017256.2\|AOR25188.1\|162302_162653_-\|transposase	unknown	unknown	gnl\|CDD\|377551
CP017256.2\|AOR25184.1\|154445_155018_-\|ATPase	unknown	unknown	gnl\|CDD\|226648
CP017256.2\|AOR25179.1\|144881_145628_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
CP017256.2\|AOR25189.1\|162640_162973_-\|hypothetical-protein	unknown	unknown	unknown
CP017256.2\|AOR25181.1\|147848_148652_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372574
CP017256.2\|AUO15662.1\|155023_155197_-\|hypothetical-protein	unknown	unknown	unknown
CP017256.2\|AOR25180.1\|146689_147445_-\|N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
CP017256.2\|AOR25182.1\|150445_150670_-\|hypothetical-protein	unknown	unknown	unknown
CP017256.2\|AOR25198.2\|160581_162192_-\|IS66-family-transposase	unknown	unknown	gnl\|CDD\|376980
CP017256.2\|AOR25185.1\|157658_158132_-\|hypothetical-protein	unknown	unknown	unknown
CP017256.2\|AOR25186.1\|158428_159055_-\|glutamine-amidotransferase	unknown	unknown	gnl\|CDD\|153234
CP017256.2\|AOR25187.1\|159458_160373_-\|transcriptional-regulator	WYL	COG2378_WYL_CAS-I:CAS-III	gnl\|CDD\|225253
CP017256.2\|AOR25183.1\|151040_152054_+\|hypothetical-protein	unknown	unknown	unknown
CP017256.2\|AOR25177.1\|141656_142313_+\|DUF1311-domain-containing-protein	unknown	unknown	gnl\|CDD\|377758
CP017256.2\|AOR25178.1\|142416_143631_-\|serine/threonine-transporter-SstT	unknown	unknown	gnl\|CDD\|184190
CP017256.2\|AOR25196.1\|144506_144716_-\|hypothetical-protein	unknown	unknown	unknown
CP017256.2\|AOR25176.1\|140531_141179_-\|chloramphenicol-acetyltransferase-CAT	unknown	unknown	gnl\|CDD\|215002
CP017256.2\|AOR25197.1\|156517_157069_-\|hypothetical-protein	unknown	unknown	unknown
CP017256.2\|AUO15661.1\|146042_146237_+\|DUF2892-domain-containing-protein	unknown	unknown	gnl\|CDD\|378561

Protein	Function_ID	Function_description	E-value
CP017256.2\|AOR25188.1\|162302_162653_-\|transposase	gnl\|CDD\|377551	pfam05717, TnpB_IS66, IS66 Orf2 like protein. This protein is found in insertion sequences related to IS66. The function of these proteins is uncertain, but they are probably essential for transposition.	9.4425e-45
CP017256.2\|AOR25184.1\|154445_155018_-\|ATPase	gnl\|CDD\|226648	COG4185, COG4185, Uncharacterized protein conserved in bacteria [Function unknown].	2.84736e-65
CP017256.2\|AOR25179.1\|144881_145628_-\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	3.34711e-18
CP017256.2\|AOR25181.1\|147848_148652_-\|hypothetical-protein	gnl\|CDD\|372574	pfam13349, DUF4097, Putative adhesin. This has a putative all-beta structure with a twenty-residue repeat with a highly conserved repeating GD, gly-asp, motif. It may form part of a bacterial adhesin.	6.29687e-09
CP017256.2\|AOR25180.1\|146689_147445_-\|N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	7.24414e-08
CP017256.2\|AOR25186.1\|158428_159055_-\|glutamine-amidotransferase	gnl\|CDD\|153234	cd03140, GATase1_PfpI_3, Type 1 glutamine amidotransferase (GATase1)-like domain found in a subgroup of proteins similar to PfpI from Pyrococcus furiosus. Type 1 glutamine amidotransferase (GATase1)-like domain found in a subgroup of proteins similar to PfpI from Pyrococcus furiosus. PfpI is an ATP-independent intracellular proteases which may hydrolyze small peptides to provide a nutritional source. Only Cys of the catalytic triad typical of GATase1 domains is conserved in this group. This Cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow.	3.22085e-55
CP017256.2\|AOR25187.1\|159458_160373_-\|transcriptional-regulator	gnl\|CDD\|225253	COG2378, COG2378, Predicted transcriptional regulator [Transcription].	2.69486e-39
CP017256.2\|AOR25198.2\|160581_162192_-\|IS66-family-transposase	gnl\|CDD\|376980	pfam03050, DDE_Tnp_IS66, Transposase IS66 family. Transposase proteins are necessary for efficient DNA transposition. This family includes IS66 from Agrobacterium tumefaciens.	6.90651e-108
CP017256.2\|AOR25177.1\|141656_142313_+\|DUF1311-domain-containing-protein	gnl\|CDD\|377758	pfam07007, LprI, Lysozyme inhibitor LprI. This family consists of several bacterial proteins of around 120 residues in length. Members of this family contain four highly conserved cysteine residues. Family members include lipoprotein LprI from Mycobacterium, which binds to and inhibits macrophage lysozyme, which may aid bacterial survival.	3.55617e-12
CP017256.2\|AOR25178.1\|142416_143631_-\|serine/threonine-transporter-SstT	gnl\|CDD\|184190	PRK13628, PRK13628, serine/threonine transporter SstT; Provisional.	0
CP017256.2\|AOR25176.1\|140531_141179_-\|chloramphenicol-acetyltransferase-CAT	gnl\|CDD\|215002	smart01059, CAT, Chloramphenicol acetyltransferase. Chloramphenicol acetyltransferase (CAT).catalyzes the acetyl-CoA dependent acetylation of chloramphenicol (Cm), an antibiotic which inhibits prokaryotic peptidyltransferase activity. Acetylation of Cm by CAT inactivates the antibiotic. A histidine residue, located in the C-terminal section of the enzyme, plays a central role in its catalytic mechanism. There is a second family of CAT. evolutionary unrelated to the main family described above. These CAT belong to the bacterial hexapeptide-repeat containing-transferases family (see ). The crystal structure of the type III enzyme from Escherichia coli with chloramphenicol bound has been determined. CAT is a trimer of identical subunits (monomer Mr 25,000) and the trimeric structure is stabilised by a number of hydrogen bonds, some of which result in the extension of a beta-sheet across the subunit interface. Chloramphenicol binds in a deep pocket located at the boundary between adjacent subunits of the trimer, such that the majority of residues forming the binding pocket belong to one subunit while the catalytically essential histidine belongs to the adjacent subunit. His195 is appropriately positioned to act as a general base catalyst in the reaction, and the required tautomeric stabilisation is provided by an unusual interaction with a main-chain carbonyl oxygen.	1.16503e-62
CP017256.2\|AUO15661.1\|146042_146237_+\|DUF2892-domain-containing-protein	gnl\|CDD\|378561	pfam11127, DUF2892, Protein of unknown function (DUF2892). This family is conserved in bacteria. The function is not known.	2.20778e-14

>CP017256.2|AOR25183.1|151040_152054_+|hypothetical-protein
MDLTKKGNTIGLFSGLTWGLYTIILYTVLNLYANAKGDLLSLKGIMLILITTVLISLVDLFFNIVFELILLSKKNLINEFKSVLFSKKGFGVIPAAILAGPFGLIPYAIASTISAPVAGAFSALYPVVGAVTSFLVFKEKLPKLKIIGGIMAVLGVMATYQLQTVSLIVYIIALIPAFGWGLEAIFGYKLIKDDINPIVTITIRHIYSIVILGICLLVFLLISGEYSYIVEFYSGIQYSDMFAYINKSLILPTFIIGSFIGGASYILWYVSMKYISVAPAMILNITYVLWIPIILMLPPFSQTISPNVLLGCTIIFFGTSLVIIGDTIKAKSRKKVN
>CP017256.2|AOR25182.1|150445_150670_-|hypothetical-protein
MCAFNIRSIKLRNYSCKGSLNKLNRFVKQYDNKSITNNVIINDTLKVTKIVTIKDIKFVTKKVTNNITIVKLLY
>CP017256.2|AOR25181.1|147848_148652_-|hypothetical-protein
MKKVLILAIVGIVLISSIGCNINSKTKNTISNQENETLNKNKVIDEKINLDNATDIDIEICAAKVSIKNYDGEEVKVTGELSEKSKDLDINKNGNKIQIIEKRDKLKGLDMDAESNGSKFDILVPSKFNGNFVFEQGAGTVDIEGIKVKNIDISGGSVKSKCEDIKFDKLNLDSGAGNFDLNLKEKCGDIKIKGGVGKLNLKMAEVGGNLKYEGGVGDIDITIPVNSPVKLLAEKGLGHCNIDAKTSGEETYTFDLEVGVGLINVRN
>CP017256.2|AOR25180.1|146689_147445_-|N-acetyltransferase
MYTKTEILEIAKSQLALDYNCQLSDFEKEKNTIVEKNMMDGRRIYGNDGCFLKILCFGGRAIISTAPRIIPWCKEKLLNRNAAWLFEYPKLRLIDKKLQEFGHEIADIHHYYLPNPNVMCIEPITNVKWYEYEDILQFNNDDRFREALGFDENNPDVLAVAAYDGDNIMGMAGASSDSKTMWQIGIDVLPEYRGRGIGTNLVTLLKNEIFKRGKIPFYGTVESHFHSQNIAINAGFFPAWAELYSKTKSNI
>CP017256.2|AUO15661.1|146042_146237_+|DUF2892-domain-containing-protein
MKCNVGRTEQIIRIVIGISIVLIGLYFRNWWGIIGLVPIITGSIRYCPISNILRISTCDIKEKQ
>CP017256.2|AOR25179.1|144881_145628_-|alpha/beta-hydrolase
MSYFKYKNFNIYYKVYGEGKPLVIIHGDTASSKMFIPELKFYSKNFKVILLDLVGQGKSQRVNDLPLNYWNFNAMLVIELCKYIGISDVNLLGTSGGAIIALNAVLEEPALFNKIIVDSFMGENLSYEFAKKILYDRKIAKSKLSSKLFWFMMHGFDWKNVIDQNTNLIINFSSNRGNFFDCNLSNIKNDTLITGSLKDDLIPNIESILKSINLKIENSKLIIFKNGNHPAMFSNKKEFRNLVLNFLN
>CP017256.2|AOR25196.1|144506_144716_-|hypothetical-protein
MFLIIINKKSNNKKIKKIAQILNTSSIIIAIFFAFEAIDGFNRKLKLIGLMMIIFSGFMKGILKKLKIT
>CP017256.2|AOR25178.1|142416_143631_-|serine/threonine-transporter-SstT
MKKLIEKWNNISLIKRIIFGLILGIIFALTIPDLGAPISIFGSLFVGALKAIAPILVFFLVIAALSQYKEGKKTNMKSVILLYLLGTLSAGVVGVIGSFLFPVKLVFTTSVDNLKPPSGVGEVLNNLLMNIVSNPVSALSNANYIGILFWAVILGLALKNANEGSKKVIANLSDAISQVVRWIINLAPFGIMGLVFDSISKQGVESLIKYGQLILVLVGCMAFFALVINPIITFILIHKNPYPLVIKCLKNSGITAFFTRSSAANIPVNMALCKELGLNEDTYSISIPLGATINMGGAALTISVLTLAATNTLGITVDIGTAIILVLLAAVSACGTSGVAGGSLLLVPLACSLFGIPNDIAMQVVGVGFIIGVIQDSCETALNSSTDVLYTAVAEFAQRRKLKP
>CP017256.2|AOR25177.1|141656_142313_+|DUF1311-domain-containing-protein
MKQKAILCLVLIGLTSFNFIGCTNSDKNITSKNEQQENISTEDSETKTDNNSDTETDKAKNNTDNNINKSSQNSNKEVNNKKTEKSVKENNNNAKKTQQSTKQIYKNKLNNIELGMKDLDEKDATGINMTMISAATERNKRWDDALNEIYGVLKEQLSSDDMKKLENEEIKWISYRDDKAKNDSSPYKGGSIYSYIYTSSLAETTKERCYKLVEKYMK
>CP017256.2|AOR25176.1|140531_141179_-|chloramphenicol-acetyltransferase-CAT
MGFNIINMDTWDRKDCFNHFFNNAKCTYSVTINIDITNLYNYIRTNKLRFYPTFTWVVSKAINNYQEFKMTFDKEGRLGFFDEIGPSYSVLNDRTKVMSDLYTSFNNVFLSFYENMVNALNSYKEDTNFTTQFQNNFFIVSCLPWFTYTSFNVNNEGSSPFLFPMVTWGKFFEEGNKIIMPVTIQVHHAVADGYHCSLFFSDVKEISLNPEQYLK
>CP017256.2|AOR25184.1|154445_155018_-|ATPase
MKRYTLFAGVNGSGKTSIYKSVFFNEDYIGKRINTDEMVARIGSWQDNNLQIKVAREAVKMINYYINNEISFHQETTLSGKSILTNISKAKEKGFYVVMNYIGVKNSEIAKERVKIRVSKGGHGIPDDVIEKRYSNSLINLEEAIKICDEVNIYDNTHEFIELINIKSGKLIWKNNIMQEWAKTILEYLN
>CP017256.2|AUO15662.1|155023_155197_-|hypothetical-protein
MESNKENINLYNQFLKYSYSELKELFNQAKTKEEQDFYMSMANLVLQREQRRVINEM
>CP017256.2|AOR25197.1|156517_157069_-|hypothetical-protein
MNYIKIINALKNKGIIFEKGLSKQEFNMIENFYGVNFPPDLKEFLSLALPISNKFINWRDMSEDNIKKIQDKLEWPLEGIIFDIENNNFWYKNWGNKPDNFEEAIDICKKEMKKVPKLIPICSHRYIPSEPNESGNPIFSIYQTDIIYYGEDLLSYLQLEFNMKKYEDIDFDLIKEIKFWVDL
>CP017256.2|AOR25185.1|157658_158132_-|hypothetical-protein
MMNVFFEDEEITENDLYFMCYIIERIARTLHTRNKEVVNTIGYDELVKKISLANVLHCENPLKVVDDWIKEYDLKKGDFNILDVDKELVEKVPSETQMGKVYKRLILNTLEPNEDYIQGLIRVYNAKICDIIDDYNSSAYYEPLPTIVRSYYNSSFN
>CP017256.2|AOR25186.1|158428_159055_-|glutamine-amidotransferase
MKKIIYLYILESMAEWEVGYILQAISMESMLKKQNREFVIKTVGMSKNPIQTIGGLTITPDCLLDEIDENNIVALLLPGAETWNNEENNQILQKALSYIDKGILVGAICGATLPLADLKVLDKFKHTSNSLDYLTLFSKQYSGKKLYVNCPAVVDCNLITASSSGGLLWAKHIIQYLKVFPCEIIESWYNYYFTGDHIYYTELISQSI
>CP017256.2|AOR25187.1|159458_160373_-|transcriptional-regulator
MKIERLLGILFYLINRNNVSGNSLAEYFNVSRRTIIRDINTLTLAGVPIYSEMGSKGGYSINPDYKLNEKIIDNDNFGYILLALQSLKSVYGEKKVHETYEKVKHIYSDENNNHALNVDFSVVNENKSVISYISMLKEAVQHNKTVLFQYTNLNSNTRRVKCNIIHVFYKWYSWYAFGYDLEKSDFRMFKIVRMRKLEISEEYFDNNYDVAKLVDDYEEKRNKDNIYVTIEYSKEIDALINEYFRGDVINVLETSIVKKVAIKENDFIMFSIILGFGEKIKVLSPLSYQQRIKEHLKNTLIKNY
>CP017256.2|AOR25198.2|160581_162192_-|IS66-family-transposase
MDGLNLNNQLDEKTQLLISKMEREIELKDSEIQNLKTELAFLKGQILNKNRKIFGKSSEQVDSNQMSLFDDAENNCDFKMAEPTMEEIAYTRTKSSKHIGKKDNLANLERIIVEHKLEENEAICSKCNNSLVVIGRKSKEVLKYIPAKLYIEEHITYSYACKSCEAEAGVANIISTKLPNTIFYKSMASNELVAHVINMKYQHAMPLYRLETYFKMLGANLSRQTLSNWIMNSATELQVVYDIMKEQLLKKNYIQADETTVQVINDSGKDSKSKKYMWLYKSGALKDPIILYDYQNTRSSSCPKEFLKGFSGYLQTDGYTGYNRVENVKRLYCLAHIRRKYHEIIVNLDEEALKKSRAIIGFNYCEKLYKIEKDLRETYSKDEDYYKKRYKIRLKKSAPILNEFQEYVEREIKNALPKSPLGKALDYTRKLLSDMKTLLEDGSLEIDNNGAERAIKPFVIGRKNWLFSNTAKGAKSSALIYSIIETAKANGLIVEKYLVYLFDMLANTESKEKETLNNYMPWSKALPDVLRIKVGK
>CP017256.2|AOR25188.1|162302_162653_-|transposase
MLNIDKVDTVYLACGITDLRKSIDGLVMIVQTQLKLDPFEKALFVFCNRSMNRLKILHFDEGFWLYYHRLENNRLKWPMTKEEAMKVNKEELSWLLKGYEVRTTSKFKPIKEKNCY
>CP017256.2|AOR25189.1|162640_162973_-|hypothetical-protein
MVKKGTDVKWRELVEKFSSYEGTLDSFCKENSISRSQFYYYRKKFEKENNTTFQAIALENNNTNILTVTNNIKSATEIKIEIGKAKIFIPANEIALLSNILREFSKTCLI

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Crispr_ID: CP017256_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP017256_7

155321-156139

Orphan

II-B

Consensus_repeat	Method
ATTTAAATACATCCCATGTTAAGGTTAAAC	CRISPRCasFinder
ATTTAAATACATCCCATGTTAAGGTTAAAC	CRT
ATTTAAATACATCCCATGTTAAGGTTAAAC	PILER-CR

12 spacers

WYL

The CRISPR arrays of CP017256_7

>merge|CP017256|7|155321-156139|CRISPRCasFinder,CRT,PILER-CR
ATTTAAATACATCCCATGTTAAGGTTAAACTAGTGATGGGGTAATACTCTCTATGCATCAAATAGGATTTAAATACATCCCATGTTAAGGTTAAACAAGAGACAGCTAAGACAATAAGAAGTACATTAATATAATTTAAATACATCCCATGTTAAGGTTAAACAAGAATTAAAAAAACAAATTGAAACATTACAAAAATTTAAATACATCCCATGTTAAGGTTAAACATATCAGTAACGGATAAATAAAATTTTCTCATAGTTATTTAAATACATCCCATGTTAAGGTTAAACATTCATTCTAGGTTCTAATTCACTATCTATATTTATATTTAAATACATCCCATGTTAAGGTTAAACGACATGTATCGAAGTATATGAAATGGTTCTAAGAGAATTTAAATACATCCCATGTTAAGGTTAAACAAGAGACAGCTAAGACAATAAGAAGTACATTAATATAATTTAAATACATCCCATGTTAAGGTTAAACAAGAATTAAAAAAACAAATTGAAACATTACAAAAATTTAAATACATCCCATGTTAAGGTTAAACATATCAGTAACGGATAAATAAAATTTTCTCATAGTTATTTAAATACATCCCATGTTAAGGTTAAACATTCATTCTAGGTTCTAATTCACTATCTATATTTATATTTAAATACATCCCATGTTAAGGTTAAACGACATGTATCGAAGTATATGAAATGGTTCTAAGAGAATTTAAATACATCCCATGTTAAGGTTAAACTTTATTCTATAATTTTCCCCCATCTCAATACGCACATTTAAATACATCCCATGTTAAGGTTAAAC

>CP017256|7|7|155321-156139|CRISPRCasFinder
ATTTAAATACATCCCATGTTAAGGTTAAAC	TAGTGATGGGGTAATACTCTCTATGCATCAAATAGG
ATTTAAATACATCCCATGTTAAGGTTAAAC	AAGAGACAGCTAAGACAATAAGAAGTACATTAATATA
ATTTAAATACATCCCATGTTAAGGTTAAAC	AAGAATTAAAAAAACAAATTGAAACATTACAAAA
ATTTAAATACATCCCATGTTAAGGTTAAAC	ATATCAGTAACGGATAAATAAAATTTTCTCATAGTT
ATTTAAATACATCCCATGTTAAGGTTAAAC	ATTCATTCTAGGTTCTAATTCACTATCTATATTTAT
ATTTAAATACATCCCATGTTAAGGTTAAAC	GACATGTATCGAAGTATATGAAATGGTTCTAAGAGA
ATTTAAATACATCCCATGTTAAGGTTAAAC	AAGAGACAGCTAAGACAATAAGAAGTACATTAATATA
ATTTAAATACATCCCATGTTAAGGTTAAAC	AAGAATTAAAAAAACAAATTGAAACATTACAAAA
ATTTAAATACATCCCATGTTAAGGTTAAAC	ATATCAGTAACGGATAAATAAAATTTTCTCATAGTT
ATTTAAATACATCCCATGTTAAGGTTAAAC	ATTCATTCTAGGTTCTAATTCACTATCTATATTTAT
ATTTAAATACATCCCATGTTAAGGTTAAAC	GACATGTATCGAAGTATATGAAATGGTTCTAAGAGA
ATTTAAATACATCCCATGTTAAGGTTAAAC	TTTATTCTATAATTTTCCCCCATCTCAATACGCAC
ATTTAAATACATCCCATGTTAAGGTTAAAC

>CP017256|7|2|155321-156139|CRT
ATTTAAATACATCCCATGTTAAGGTTAAAC	TAGTGATGGGGTAATACTCTCTATGCATCAAATAGG
ATTTAAATACATCCCATGTTAAGGTTAAAC	AAGAGACAGCTAAGACAATAAGAAGTACATTAATATA
ATTTAAATACATCCCATGTTAAGGTTAAAC	AAGAATTAAAAAAACAAATTGAAACATTACAAAA
ATTTAAATACATCCCATGTTAAGGTTAAAC	ATATCAGTAACGGATAAATAAAATTTTCTCATAGTT
ATTTAAATACATCCCATGTTAAGGTTAAAC	ATTCATTCTAGGTTCTAATTCACTATCTATATTTAT
ATTTAAATACATCCCATGTTAAGGTTAAAC	GACATGTATCGAAGTATATGAAATGGTTCTAAGAGA
ATTTAAATACATCCCATGTTAAGGTTAAAC	AAGAGACAGCTAAGACAATAAGAAGTACATTAATATA
ATTTAAATACATCCCATGTTAAGGTTAAAC	AAGAATTAAAAAAACAAATTGAAACATTACAAAA
ATTTAAATACATCCCATGTTAAGGTTAAAC	ATATCAGTAACGGATAAATAAAATTTTCTCATAGTT
ATTTAAATACATCCCATGTTAAGGTTAAAC	ATTCATTCTAGGTTCTAATTCACTATCTATATTTAT
ATTTAAATACATCCCATGTTAAGGTTAAAC	GACATGTATCGAAGTATATGAAATGGTTCTAAGAGA
ATTTAAATACATCCCATGTTAAGGTTAAAC	TTTATTCTATAATTTTCCCCCATCTCAATACGCAC
ATTTAAATACATCCCATGTTAAGGTTAAAC

>CP017256|7|4|155518-156139|PILER-CR
ATTTAAATACATCCCATGTTAAGGTTAAAC	ATATCAGTAACGGATAAATAAAATTTTCTCATAGTT
ATTTAAATACATCCCATGTTAAGGTTAAAC	ATTCATTCTAGGTTCTAATTCACTATCTATATTTAT
ATTTAAATACATCCCATGTTAAGGTTAAAC	GACATGTATCGAAGTATATGAAATGGTTCTAAGAGA
ATTTAAATACATCCCATGTTAAGGTTAAAC	AAGAGACAGCTAAGACAATAAGAAGTACATTAATATA
ATTTAAATACATCCCATGTTAAGGTTAAAC	AAGAATTAAAAAAACAAATTGAAACATTACAAAA
ATTTAAATACATCCCATGTTAAGGTTAAAC	ATATCAGTAACGGATAAATAAAATTTTCTCATAGTT
ATTTAAATACATCCCATGTTAAGGTTAAAC	ATTCATTCTAGGTTCTAATTCACTATCTATATTTAT
ATTTAAATACATCCCATGTTAAGGTTAAAC	GACATGTATCGAAGTATATGAAATGGTTCTAAGAGA
ATTTAAATACATCCCATGTTAAGGTTAAAC	TTTATTCTATAATTTTCCCCCATCTCAATACGCAC
ATTTAAATACATCCCATGTTAAGGTTAAAC

Protein	Signature genes	Signature genes Name	Protein_function
CP017256.2\|AOR25188.1\|162302_162653_-\|transposase	unknown	unknown	gnl\|CDD\|377551
CP017256.2\|AOR25184.1\|154445_155018_-\|ATPase	unknown	unknown	gnl\|CDD\|226648
CP017256.2\|AOR25179.1\|144881_145628_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
CP017256.2\|AOR25189.1\|162640_162973_-\|hypothetical-protein	unknown	unknown	unknown
CP017256.2\|AOR25181.1\|147848_148652_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372574
CP017256.2\|AOR25180.1\|146689_147445_-\|N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
CP017256.2\|AOR25182.1\|150445_150670_-\|hypothetical-protein	unknown	unknown	unknown
CP017256.2\|AOR25198.2\|160581_162192_-\|IS66-family-transposase	unknown	unknown	gnl\|CDD\|376980
CP017256.2\|AOR25185.1\|157658_158132_-\|hypothetical-protein	unknown	unknown	unknown
CP017256.2\|AOR25186.1\|158428_159055_-\|glutamine-amidotransferase	unknown	unknown	gnl\|CDD\|153234
CP017256.2\|AOR25187.1\|159458_160373_-\|transcriptional-regulator	WYL	COG2378_WYL_CAS-I:CAS-III	gnl\|CDD\|225253
CP017256.2\|AOR25183.1\|151040_152054_+\|hypothetical-protein	unknown	unknown	unknown
CP017256.2\|AOR25178.1\|142416_143631_-\|serine/threonine-transporter-SstT	unknown	unknown	gnl\|CDD\|184190
CP017256.2\|AOR25196.1\|144506_144716_-\|hypothetical-protein	unknown	unknown	unknown
CP017256.2\|AUO15662.1\|155023_155197_-\|hypothetical-protein	unknown	unknown	unknown
CP017256.2\|AOR25197.1\|156517_157069_-\|hypothetical-protein	unknown	unknown	unknown
CP017256.2\|AUO15661.1\|146042_146237_+\|DUF2892-domain-containing-protein	unknown	unknown	gnl\|CDD\|378561

Protein	Function_ID	Function_description	E-value
CP017256.2\|AOR25188.1\|162302_162653_-\|transposase	gnl\|CDD\|377551	pfam05717, TnpB_IS66, IS66 Orf2 like protein. This protein is found in insertion sequences related to IS66. The function of these proteins is uncertain, but they are probably essential for transposition.	9.4425e-45
CP017256.2\|AOR25184.1\|154445_155018_-\|ATPase	gnl\|CDD\|226648	COG4185, COG4185, Uncharacterized protein conserved in bacteria [Function unknown].	2.84736e-65
CP017256.2\|AOR25179.1\|144881_145628_-\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	3.34711e-18
CP017256.2\|AOR25187.1\|159458_160373_-\|transcriptional-regulator	gnl\|CDD\|225253	COG2378, COG2378, Predicted transcriptional regulator [Transcription].	2.69486e-39
CP017256.2\|AOR25181.1\|147848_148652_-\|hypothetical-protein	gnl\|CDD\|372574	pfam13349, DUF4097, Putative adhesin. This has a putative all-beta structure with a twenty-residue repeat with a highly conserved repeating GD, gly-asp, motif. It may form part of a bacterial adhesin.	6.29687e-09
CP017256.2\|AOR25198.2\|160581_162192_-\|IS66-family-transposase	gnl\|CDD\|376980	pfam03050, DDE_Tnp_IS66, Transposase IS66 family. Transposase proteins are necessary for efficient DNA transposition. This family includes IS66 from Agrobacterium tumefaciens.	6.90651e-108
CP017256.2\|AOR25180.1\|146689_147445_-\|N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	7.24414e-08
CP017256.2\|AOR25178.1\|142416_143631_-\|serine/threonine-transporter-SstT	gnl\|CDD\|184190	PRK13628, PRK13628, serine/threonine transporter SstT; Provisional.	0
CP017256.2\|AOR25186.1\|158428_159055_-\|glutamine-amidotransferase	gnl\|CDD\|153234	cd03140, GATase1_PfpI_3, Type 1 glutamine amidotransferase (GATase1)-like domain found in a subgroup of proteins similar to PfpI from Pyrococcus furiosus. Type 1 glutamine amidotransferase (GATase1)-like domain found in a subgroup of proteins similar to PfpI from Pyrococcus furiosus. PfpI is an ATP-independent intracellular proteases which may hydrolyze small peptides to provide a nutritional source. Only Cys of the catalytic triad typical of GATase1 domains is conserved in this group. This Cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow.	3.22085e-55
CP017256.2\|AUO15661.1\|146042_146237_+\|DUF2892-domain-containing-protein	gnl\|CDD\|378561	pfam11127, DUF2892, Protein of unknown function (DUF2892). This family is conserved in bacteria. The function is not known.	2.20778e-14

>CP017256.2|AUO15662.1|155023_155197_-|hypothetical-protein
MESNKENINLYNQFLKYSYSELKELFNQAKTKEEQDFYMSMANLVLQREQRRVINEM
>CP017256.2|AOR25184.1|154445_155018_-|ATPase
MKRYTLFAGVNGSGKTSIYKSVFFNEDYIGKRINTDEMVARIGSWQDNNLQIKVAREAVKMINYYINNEISFHQETTLSGKSILTNISKAKEKGFYVVMNYIGVKNSEIAKERVKIRVSKGGHGIPDDVIEKRYSNSLINLEEAIKICDEVNIYDNTHEFIELINIKSGKLIWKNNIMQEWAKTILEYLN
>CP017256.2|AOR25183.1|151040_152054_+|hypothetical-protein
MDLTKKGNTIGLFSGLTWGLYTIILYTVLNLYANAKGDLLSLKGIMLILITTVLISLVDLFFNIVFELILLSKKNLINEFKSVLFSKKGFGVIPAAILAGPFGLIPYAIASTISAPVAGAFSALYPVVGAVTSFLVFKEKLPKLKIIGGIMAVLGVMATYQLQTVSLIVYIIALIPAFGWGLEAIFGYKLIKDDINPIVTITIRHIYSIVILGICLLVFLLISGEYSYIVEFYSGIQYSDMFAYINKSLILPTFIIGSFIGGASYILWYVSMKYISVAPAMILNITYVLWIPIILMLPPFSQTISPNVLLGCTIIFFGTSLVIIGDTIKAKSRKKVN
>CP017256.2|AOR25182.1|150445_150670_-|hypothetical-protein
MCAFNIRSIKLRNYSCKGSLNKLNRFVKQYDNKSITNNVIINDTLKVTKIVTIKDIKFVTKKVTNNITIVKLLY
>CP017256.2|AOR25181.1|147848_148652_-|hypothetical-protein
MKKVLILAIVGIVLISSIGCNINSKTKNTISNQENETLNKNKVIDEKINLDNATDIDIEICAAKVSIKNYDGEEVKVTGELSEKSKDLDINKNGNKIQIIEKRDKLKGLDMDAESNGSKFDILVPSKFNGNFVFEQGAGTVDIEGIKVKNIDISGGSVKSKCEDIKFDKLNLDSGAGNFDLNLKEKCGDIKIKGGVGKLNLKMAEVGGNLKYEGGVGDIDITIPVNSPVKLLAEKGLGHCNIDAKTSGEETYTFDLEVGVGLINVRN
>CP017256.2|AOR25180.1|146689_147445_-|N-acetyltransferase
MYTKTEILEIAKSQLALDYNCQLSDFEKEKNTIVEKNMMDGRRIYGNDGCFLKILCFGGRAIISTAPRIIPWCKEKLLNRNAAWLFEYPKLRLIDKKLQEFGHEIADIHHYYLPNPNVMCIEPITNVKWYEYEDILQFNNDDRFREALGFDENNPDVLAVAAYDGDNIMGMAGASSDSKTMWQIGIDVLPEYRGRGIGTNLVTLLKNEIFKRGKIPFYGTVESHFHSQNIAINAGFFPAWAELYSKTKSNI
>CP017256.2|AUO15661.1|146042_146237_+|DUF2892-domain-containing-protein
MKCNVGRTEQIIRIVIGISIVLIGLYFRNWWGIIGLVPIITGSIRYCPISNILRISTCDIKEKQ
>CP017256.2|AOR25179.1|144881_145628_-|alpha/beta-hydrolase
MSYFKYKNFNIYYKVYGEGKPLVIIHGDTASSKMFIPELKFYSKNFKVILLDLVGQGKSQRVNDLPLNYWNFNAMLVIELCKYIGISDVNLLGTSGGAIIALNAVLEEPALFNKIIVDSFMGENLSYEFAKKILYDRKIAKSKLSSKLFWFMMHGFDWKNVIDQNTNLIINFSSNRGNFFDCNLSNIKNDTLITGSLKDDLIPNIESILKSINLKIENSKLIIFKNGNHPAMFSNKKEFRNLVLNFLN
>CP017256.2|AOR25196.1|144506_144716_-|hypothetical-protein
MFLIIINKKSNNKKIKKIAQILNTSSIIIAIFFAFEAIDGFNRKLKLIGLMMIIFSGFMKGILKKLKIT
>CP017256.2|AOR25178.1|142416_143631_-|serine/threonine-transporter-SstT
MKKLIEKWNNISLIKRIIFGLILGIIFALTIPDLGAPISIFGSLFVGALKAIAPILVFFLVIAALSQYKEGKKTNMKSVILLYLLGTLSAGVVGVIGSFLFPVKLVFTTSVDNLKPPSGVGEVLNNLLMNIVSNPVSALSNANYIGILFWAVILGLALKNANEGSKKVIANLSDAISQVVRWIINLAPFGIMGLVFDSISKQGVESLIKYGQLILVLVGCMAFFALVINPIITFILIHKNPYPLVIKCLKNSGITAFFTRSSAANIPVNMALCKELGLNEDTYSISIPLGATINMGGAALTISVLTLAATNTLGITVDIGTAIILVLLAAVSACGTSGVAGGSLLLVPLACSLFGIPNDIAMQVVGVGFIIGVIQDSCETALNSSTDVLYTAVAEFAQRRKLKP
>CP017256.2|AOR25197.1|156517_157069_-|hypothetical-protein
MNYIKIINALKNKGIIFEKGLSKQEFNMIENFYGVNFPPDLKEFLSLALPISNKFINWRDMSEDNIKKIQDKLEWPLEGIIFDIENNNFWYKNWGNKPDNFEEAIDICKKEMKKVPKLIPICSHRYIPSEPNESGNPIFSIYQTDIIYYGEDLLSYLQLEFNMKKYEDIDFDLIKEIKFWVDL
>CP017256.2|AOR25185.1|157658_158132_-|hypothetical-protein
MMNVFFEDEEITENDLYFMCYIIERIARTLHTRNKEVVNTIGYDELVKKISLANVLHCENPLKVVDDWIKEYDLKKGDFNILDVDKELVEKVPSETQMGKVYKRLILNTLEPNEDYIQGLIRVYNAKICDIIDDYNSSAYYEPLPTIVRSYYNSSFN
>CP017256.2|AOR25186.1|158428_159055_-|glutamine-amidotransferase
MKKIIYLYILESMAEWEVGYILQAISMESMLKKQNREFVIKTVGMSKNPIQTIGGLTITPDCLLDEIDENNIVALLLPGAETWNNEENNQILQKALSYIDKGILVGAICGATLPLADLKVLDKFKHTSNSLDYLTLFSKQYSGKKLYVNCPAVVDCNLITASSSGGLLWAKHIIQYLKVFPCEIIESWYNYYFTGDHIYYTELISQSI
>CP017256.2|AOR25187.1|159458_160373_-|transcriptional-regulator
MKIERLLGILFYLINRNNVSGNSLAEYFNVSRRTIIRDINTLTLAGVPIYSEMGSKGGYSINPDYKLNEKIIDNDNFGYILLALQSLKSVYGEKKVHETYEKVKHIYSDENNNHALNVDFSVVNENKSVISYISMLKEAVQHNKTVLFQYTNLNSNTRRVKCNIIHVFYKWYSWYAFGYDLEKSDFRMFKIVRMRKLEISEEYFDNNYDVAKLVDDYEEKRNKDNIYVTIEYSKEIDALINEYFRGDVINVLETSIVKKVAIKENDFIMFSIILGFGEKIKVLSPLSYQQRIKEHLKNTLIKNY
>CP017256.2|AOR25198.2|160581_162192_-|IS66-family-transposase
MDGLNLNNQLDEKTQLLISKMEREIELKDSEIQNLKTELAFLKGQILNKNRKIFGKSSEQVDSNQMSLFDDAENNCDFKMAEPTMEEIAYTRTKSSKHIGKKDNLANLERIIVEHKLEENEAICSKCNNSLVVIGRKSKEVLKYIPAKLYIEEHITYSYACKSCEAEAGVANIISTKLPNTIFYKSMASNELVAHVINMKYQHAMPLYRLETYFKMLGANLSRQTLSNWIMNSATELQVVYDIMKEQLLKKNYIQADETTVQVINDSGKDSKSKKYMWLYKSGALKDPIILYDYQNTRSSSCPKEFLKGFSGYLQTDGYTGYNRVENVKRLYCLAHIRRKYHEIIVNLDEEALKKSRAIIGFNYCEKLYKIEKDLRETYSKDEDYYKKRYKIRLKKSAPILNEFQEYVEREIKNALPKSPLGKALDYTRKLLSDMKTLLEDGSLEIDNNGAERAIKPFVIGRKNWLFSNTAKGAKSSALIYSIIETAKANGLIVEKYLVYLFDMLANTESKEKETLNNYMPWSKALPDVLRIKVGK
>CP017256.2|AOR25188.1|162302_162653_-|transposase
MLNIDKVDTVYLACGITDLRKSIDGLVMIVQTQLKLDPFEKALFVFCNRSMNRLKILHFDEGFWLYYHRLENNRLKWPMTKEEAMKVNKEELSWLLKGYEVRTTSKFKPIKEKNCY
>CP017256.2|AOR25189.1|162640_162973_-|hypothetical-protein
MVKKGTDVKWRELVEKFSSYEGTLDSFCKENSISRSQFYYYRKKFEKENNTTFQAIALENNNTNILTVTNNIKSATEIKIEIGKAKIFIPANEIALLSNILREFSKTCLI

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP017256_1	1.1\|8373\|35\|CP017256\|CRISPRCasFinder,CRT	8373-8407	35	NZ_CP017256	Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence	8373-8407	0	1.0
CP017256_1	1.2\|8438\|36\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	8438-8473	36	NZ_CP017256	Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence	8438-8473	0	1.0
CP017256_1	1.3\|8504\|37\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	8504-8540	37	NZ_CP017256	Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence	8504-8540	0	1.0
CP017256_1	1.4\|8571\|34\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	8571-8604	34	NZ_CP017256	Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence	8571-8604	0	1.0
CP017256_1	1.5\|8635\|36\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	8635-8670	36	NZ_CP017256	Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence	8635-8670	0	1.0
CP017256_1	1.6\|8701\|36\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	8701-8736	36	NZ_CP017256	Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence	8701-8736	0	1.0
CP017256_1	1.7\|8767\|37\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	8767-8803	37	NZ_CP017256	Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence	8767-8803	0	1.0
CP017256_1	1.8\|8834\|36\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	8834-8869	36	NZ_CP017256	Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence	8834-8869	0	1.0
CP017256_1	1.9\|8900\|35\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	8900-8934	35	NZ_CP017256	Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence	8900-8934	0	1.0
CP017256_2	2.1\|44045\|39\|CP017256\|CRISPRCasFinder	44045-44083	39	NZ_CP017256	Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence	44045-44083	0	1.0
CP017256_3	3.1\|44232\|38\|CP017256\|CRISPRCasFinder	44232-44269	38	NZ_CP017256	Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence	44232-44269	0	1.0
CP017256_4	4.1\|44389\|38\|CP017256\|CRISPRCasFinder	44389-44426	38	NZ_CP017256	Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence	44389-44426	0	1.0
CP017256_5	5.1\|149973\|37\|CP017256\|PILER-CR,CRISPRCasFinder	149973-150009	37	NZ_CP017256	Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence	149973-150009	0	1.0
CP017256_5	5.2\|150040\|35\|CP017256\|PILER-CR,CRISPRCasFinder	150040-150074	35	NZ_CP017256	Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence	150040-150074	0	1.0
CP017256_6	6.1\|154076\|22\|CP017256\|CRISPRCasFinder	154076-154097	22	NZ_CP017256	Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence	154076-154097	0	1.0
CP017256_6	6.2\|154078\|25\|CP017256\|PILER-CR	154078-154102	25	NZ_CP017256	Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence	154076-154100	0	1.0
CP017256_6	6.3\|154130\|19\|CP017256\|PILER-CR	154130-154148	19	NZ_CP017256	Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence	154128-154146	0	1.0
CP017256_7	7.1\|155351\|36\|CP017256\|CRISPRCasFinder,CRT	155351-155386	36	NZ_CP017256	Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence	155351-155386	0	1.0
CP017256_7	7.2\|155417\|37\|CP017256\|CRISPRCasFinder,CRT	155417-155453	37	NZ_CP017256	Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence	155417-155453	0	1.0
CP017256_7	7.2\|155417\|37\|CP017256\|CRISPRCasFinder,CRT	155417-155453	37	NZ_CP017256	Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence	155746-155782	0	1.0
CP017256_7	7.3\|155484\|34\|CP017256\|CRISPRCasFinder,CRT	155484-155517	34	NZ_CP017256	Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence	155484-155517	0	1.0
CP017256_7	7.3\|155484\|34\|CP017256\|CRISPRCasFinder,CRT	155484-155517	34	NZ_CP017256	Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence	155813-155846	0	1.0
CP017256_7	7.4\|155548\|36\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	155548-155583	36	NZ_CP017256	Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence	155548-155583	0	1.0
CP017256_7	7.4\|155548\|36\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	155548-155583	36	NZ_CP017256	Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence	155877-155912	0	1.0
CP017256_7	7.5\|155614\|36\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	155614-155649	36	NZ_CP017256	Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence	155614-155649	0	1.0
CP017256_7	7.5\|155614\|36\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	155614-155649	36	NZ_CP017256	Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence	155943-155978	0	1.0
CP017256_7	7.6\|155680\|36\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	155680-155715	36	NZ_CP017256	Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence	155680-155715	0	1.0
CP017256_7	7.6\|155680\|36\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	155680-155715	36	NZ_CP017256	Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence	156009-156044	0	1.0
CP017256_7	7.7\|155746\|37\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	155746-155782	37	NZ_CP017256	Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence	155417-155453	0	1.0
CP017256_7	7.7\|155746\|37\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	155746-155782	37	NZ_CP017256	Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence	155746-155782	0	1.0
CP017256_7	7.8\|155813\|34\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	155813-155846	34	NZ_CP017256	Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence	155484-155517	0	1.0
CP017256_7	7.8\|155813\|34\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	155813-155846	34	NZ_CP017256	Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence	155813-155846	0	1.0
CP017256_7	7.9\|155877\|36\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	155877-155912	36	NZ_CP017256	Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence	155548-155583	0	1.0
CP017256_7	7.9\|155877\|36\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	155877-155912	36	NZ_CP017256	Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence	155877-155912	0	1.0
CP017256_7	7.10\|155943\|36\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	155943-155978	36	NZ_CP017256	Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence	155614-155649	0	1.0
CP017256_7	7.10\|155943\|36\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	155943-155978	36	NZ_CP017256	Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence	155943-155978	0	1.0
CP017256_7	7.11\|156009\|36\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	156009-156044	36	NZ_CP017256	Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence	155680-155715	0	1.0
CP017256_7	7.11\|156009\|36\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	156009-156044	36	NZ_CP017256	Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence	156009-156044	0	1.0
CP017256_7	7.12\|156075\|35\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	156075-156109	35	NZ_CP017256	Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence	156075-156109	0	1.0
CP017256_7	7.3\|155484\|34\|CP017256\|CRISPRCasFinder,CRT	155484-155517	34	MN694411	Marine virus AFVG_250M1188, complete genome	11062-11095	5	0.853
CP017256_7	7.3\|155484\|34\|CP017256\|CRISPRCasFinder,CRT	155484-155517	34	MN693004	Marine virus AFVG_117M22, complete genome	11059-11092	5	0.853
CP017256_7	7.3\|155484\|34\|CP017256\|CRISPRCasFinder,CRT	155484-155517	34	NZ_LR214986	Mycoplasma cynos strain NCTC10142 plasmid 13	122718-122751	5	0.853
CP017256_7	7.3\|155484\|34\|CP017256\|CRISPRCasFinder,CRT	155484-155517	34	NC_019005	Borrelia burgdorferi 297 plasmid 297_cp32-6, complete sequence	6855-6888	5	0.853
CP017256_7	7.3\|155484\|34\|CP017256\|CRISPRCasFinder,CRT	155484-155517	34	NZ_CP019918	Borreliella burgdorferi strain PAbe plasmid p_cp32-5-1, complete sequence	137-170	5	0.853
CP017256_7	7.3\|155484\|34\|CP017256\|CRISPRCasFinder,CRT	155484-155517	34	NZ_CP019918	Borreliella burgdorferi strain PAbe plasmid p_cp32-5-1, complete sequence	30811-30844	5	0.853
CP017256_7	7.3\|155484\|34\|CP017256\|CRISPRCasFinder,CRT	155484-155517	34	NZ_CP019921	Borreliella burgdorferi strain PAbe plasmid p_cp32-9-4, complete sequence	6868-6901	5	0.853
CP017256_7	7.3\|155484\|34\|CP017256\|CRISPRCasFinder,CRT	155484-155517	34	NZ_CP019921	Borreliella burgdorferi strain PAbe plasmid p_cp32-9-4, complete sequence	37520-37553	5	0.853
CP017256_7	7.3\|155484\|34\|CP017256\|CRISPRCasFinder,CRT	155484-155517	34	NC_018984	Borrelia burgdorferi 297 plasmid 297_cp32-4, complete sequence	6863-6896	5	0.853
CP017256_7	7.3\|155484\|34\|CP017256\|CRISPRCasFinder,CRT	155484-155517	34	NC_017428	Borreliella burgdorferi JD1 plasmid JD1 cp32-10, complete sequence	6859-6892	5	0.853
CP017256_7	7.3\|155484\|34\|CP017256\|CRISPRCasFinder,CRT	155484-155517	34	NC_017393	Borreliella burgdorferi JD1 plasmid JD1 cp32-11, complete sequence	6859-6892	5	0.853
CP017256_7	7.3\|155484\|34\|CP017256\|CRISPRCasFinder,CRT	155484-155517	34	NC_017396	Borreliella burgdorferi JD1 plasmid JD1 cp32-12, complete sequence	6852-6885	5	0.853
CP017256_7	7.3\|155484\|34\|CP017256\|CRISPRCasFinder,CRT	155484-155517	34	NC_017397	Borreliella burgdorferi JD1 plasmid JD1 cp32-9, complete sequence	6855-6888	5	0.853
CP017256_7	7.3\|155484\|34\|CP017256\|CRISPRCasFinder,CRT	155484-155517	34	NZ_CP031408	Borreliella burgdorferi strain MM1 plasmid plsm_cp32-1, complete sequence	26464-26497	5	0.853
CP017256_7	7.3\|155484\|34\|CP017256\|CRISPRCasFinder,CRT	155484-155517	34	NC_011722	Borreliella burgdorferi ZS7 plasmid ZS7_cp32-9, complete sequence	6865-6898	5	0.853
CP017256_7	7.3\|155484\|34\|CP017256\|CRISPRCasFinder,CRT	155484-155517	34	NC_000948	Borreliella burgdorferi B31 plasmid cp32-1, complete sequence	6852-6885	5	0.853
CP017256_7	7.3\|155484\|34\|CP017256\|CRISPRCasFinder,CRT	155484-155517	34	NC_000949	Borreliella burgdorferi B31 plasmid cp32-3, complete sequence	6852-6885	5	0.853
CP017256_7	7.3\|155484\|34\|CP017256\|CRISPRCasFinder,CRT	155484-155517	34	NC_000953	Borreliella burgdorferi B31 plasmid cp32-8, complete sequence	6852-6885	5	0.853
CP017256_7	7.3\|155484\|34\|CP017256\|CRISPRCasFinder,CRT	155484-155517	34	NC_000954	Borreliella burgdorferi B31 plasmid cp32-9, complete sequence	6868-6901	5	0.853
CP017256_7	7.3\|155484\|34\|CP017256\|CRISPRCasFinder,CRT	155484-155517	34	NZ_CP019846	Borreliella burgdorferi plasmid cp32-1, complete sequence	6836-6869	5	0.853
CP017256_7	7.3\|155484\|34\|CP017256\|CRISPRCasFinder,CRT	155484-155517	34	NZ_CP019847	Borreliella burgdorferi plasmid cp32-3, complete sequence	6852-6885	5	0.853
CP017256_7	7.3\|155484\|34\|CP017256\|CRISPRCasFinder,CRT	155484-155517	34	NZ_CP019848	Borreliella burgdorferi plasmid cp32-4, complete sequence	6862-6895	5	0.853
CP017256_7	7.3\|155484\|34\|CP017256\|CRISPRCasFinder,CRT	155484-155517	34	NZ_CP019849	Borreliella burgdorferi plasmid cp32-5, complete sequence	6848-6881	5	0.853
CP017256_7	7.3\|155484\|34\|CP017256\|CRISPRCasFinder,CRT	155484-155517	34	NZ_CP019850	Borreliella burgdorferi plasmid cp32-9, complete sequence	6868-6901	5	0.853
CP017256_7	7.3\|155484\|34\|CP017256\|CRISPRCasFinder,CRT	155484-155517	34	NZ_CP019756	Borreliella burgdorferi strain B31_NRZ isolate B31 plasmid p_cp32-1_1, complete sequence	6849-6882	5	0.853
CP017256_7	7.3\|155484\|34\|CP017256\|CRISPRCasFinder,CRT	155484-155517	34	NZ_CP019756	Borreliella burgdorferi strain B31_NRZ isolate B31 plasmid p_cp32-1_1, complete sequence	37527-37560	5	0.853
CP017256_7	7.3\|155484\|34\|CP017256\|CRISPRCasFinder,CRT	155484-155517	34	NZ_CP019758	Borreliella burgdorferi strain B31_NRZ isolate B31 plasmid p_cp32-3, complete sequence	6852-6885	5	0.853
CP017256_7	7.3\|155484\|34\|CP017256\|CRISPRCasFinder,CRT	155484-155517	34	NZ_CP019759	Borreliella burgdorferi strain B31_NRZ isolate B31 plasmid p_cp32-4, complete sequence	6862-6895	5	0.853
CP017256_7	7.3\|155484\|34\|CP017256\|CRISPRCasFinder,CRT	155484-155517	34	NZ_CP019760	Borreliella burgdorferi strain B31_NRZ isolate B31 plasmid p_cp32-9, complete sequence	6868-6901	5	0.853
CP017256_7	7.3\|155484\|34\|CP017256\|CRISPRCasFinder,CRT	155484-155517	34	NZ_CP015798	Borrelia mayonii strain MN14-1539 plasmid cp32-1, complete sequence	6856-6889	5	0.853
CP017256_7	7.3\|155484\|34\|CP017256\|CRISPRCasFinder,CRT	155484-155517	34	NC_011731	Borreliella burgdorferi ZS7 plasmid ZS7_cp32-1, complete sequence	6855-6888	5	0.853
CP017256_7	7.3\|155484\|34\|CP017256\|CRISPRCasFinder,CRT	155484-155517	34	NZ_CP017204	Borreliella burgdorferi strain B331 plasmid B331_cp32_10, complete sequence	6863-6896	5	0.853
CP017256_7	7.8\|155813\|34\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	155813-155846	34	MN694411	Marine virus AFVG_250M1188, complete genome	11062-11095	5	0.853
CP017256_7	7.8\|155813\|34\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	155813-155846	34	MN693004	Marine virus AFVG_117M22, complete genome	11059-11092	5	0.853
CP017256_7	7.8\|155813\|34\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	155813-155846	34	NZ_LR214986	Mycoplasma cynos strain NCTC10142 plasmid 13	122718-122751	5	0.853
CP017256_7	7.8\|155813\|34\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	155813-155846	34	NC_019005	Borrelia burgdorferi 297 plasmid 297_cp32-6, complete sequence	6855-6888	5	0.853
CP017256_7	7.8\|155813\|34\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	155813-155846	34	NZ_CP019918	Borreliella burgdorferi strain PAbe plasmid p_cp32-5-1, complete sequence	137-170	5	0.853
CP017256_7	7.8\|155813\|34\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	155813-155846	34	NZ_CP019918	Borreliella burgdorferi strain PAbe plasmid p_cp32-5-1, complete sequence	30811-30844	5	0.853
CP017256_7	7.8\|155813\|34\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	155813-155846	34	NZ_CP019921	Borreliella burgdorferi strain PAbe plasmid p_cp32-9-4, complete sequence	6868-6901	5	0.853
CP017256_7	7.8\|155813\|34\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	155813-155846	34	NZ_CP019921	Borreliella burgdorferi strain PAbe plasmid p_cp32-9-4, complete sequence	37520-37553	5	0.853
CP017256_7	7.8\|155813\|34\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	155813-155846	34	NC_018984	Borrelia burgdorferi 297 plasmid 297_cp32-4, complete sequence	6863-6896	5	0.853
CP017256_7	7.8\|155813\|34\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	155813-155846	34	NC_017428	Borreliella burgdorferi JD1 plasmid JD1 cp32-10, complete sequence	6859-6892	5	0.853
CP017256_7	7.8\|155813\|34\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	155813-155846	34	NC_017393	Borreliella burgdorferi JD1 plasmid JD1 cp32-11, complete sequence	6859-6892	5	0.853
CP017256_7	7.8\|155813\|34\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	155813-155846	34	NC_017396	Borreliella burgdorferi JD1 plasmid JD1 cp32-12, complete sequence	6852-6885	5	0.853
CP017256_7	7.8\|155813\|34\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	155813-155846	34	NC_017397	Borreliella burgdorferi JD1 plasmid JD1 cp32-9, complete sequence	6855-6888	5	0.853
CP017256_7	7.8\|155813\|34\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	155813-155846	34	NZ_CP031408	Borreliella burgdorferi strain MM1 plasmid plsm_cp32-1, complete sequence	26464-26497	5	0.853
CP017256_7	7.8\|155813\|34\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	155813-155846	34	NC_011722	Borreliella burgdorferi ZS7 plasmid ZS7_cp32-9, complete sequence	6865-6898	5	0.853
CP017256_7	7.8\|155813\|34\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	155813-155846	34	NC_000948	Borreliella burgdorferi B31 plasmid cp32-1, complete sequence	6852-6885	5	0.853
CP017256_7	7.8\|155813\|34\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	155813-155846	34	NC_000949	Borreliella burgdorferi B31 plasmid cp32-3, complete sequence	6852-6885	5	0.853
CP017256_7	7.8\|155813\|34\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	155813-155846	34	NC_000953	Borreliella burgdorferi B31 plasmid cp32-8, complete sequence	6852-6885	5	0.853
CP017256_7	7.8\|155813\|34\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	155813-155846	34	NC_000954	Borreliella burgdorferi B31 plasmid cp32-9, complete sequence	6868-6901	5	0.853
CP017256_7	7.8\|155813\|34\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	155813-155846	34	NZ_CP019846	Borreliella burgdorferi plasmid cp32-1, complete sequence	6836-6869	5	0.853
CP017256_7	7.8\|155813\|34\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	155813-155846	34	NZ_CP019847	Borreliella burgdorferi plasmid cp32-3, complete sequence	6852-6885	5	0.853
CP017256_7	7.8\|155813\|34\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	155813-155846	34	NZ_CP019848	Borreliella burgdorferi plasmid cp32-4, complete sequence	6862-6895	5	0.853
CP017256_7	7.8\|155813\|34\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	155813-155846	34	NZ_CP019849	Borreliella burgdorferi plasmid cp32-5, complete sequence	6848-6881	5	0.853
CP017256_7	7.8\|155813\|34\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	155813-155846	34	NZ_CP019850	Borreliella burgdorferi plasmid cp32-9, complete sequence	6868-6901	5	0.853
CP017256_7	7.8\|155813\|34\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	155813-155846	34	NZ_CP019756	Borreliella burgdorferi strain B31_NRZ isolate B31 plasmid p_cp32-1_1, complete sequence	6849-6882	5	0.853
CP017256_7	7.8\|155813\|34\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	155813-155846	34	NZ_CP019756	Borreliella burgdorferi strain B31_NRZ isolate B31 plasmid p_cp32-1_1, complete sequence	37527-37560	5	0.853
CP017256_7	7.8\|155813\|34\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	155813-155846	34	NZ_CP019758	Borreliella burgdorferi strain B31_NRZ isolate B31 plasmid p_cp32-3, complete sequence	6852-6885	5	0.853
CP017256_7	7.8\|155813\|34\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	155813-155846	34	NZ_CP019759	Borreliella burgdorferi strain B31_NRZ isolate B31 plasmid p_cp32-4, complete sequence	6862-6895	5	0.853
CP017256_7	7.8\|155813\|34\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	155813-155846	34	NZ_CP019760	Borreliella burgdorferi strain B31_NRZ isolate B31 plasmid p_cp32-9, complete sequence	6868-6901	5	0.853
CP017256_7	7.8\|155813\|34\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	155813-155846	34	NZ_CP015798	Borrelia mayonii strain MN14-1539 plasmid cp32-1, complete sequence	6856-6889	5	0.853
CP017256_7	7.8\|155813\|34\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	155813-155846	34	NC_011731	Borreliella burgdorferi ZS7 plasmid ZS7_cp32-1, complete sequence	6855-6888	5	0.853
CP017256_7	7.8\|155813\|34\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	155813-155846	34	NZ_CP017204	Borreliella burgdorferi strain B331 plasmid B331_cp32_10, complete sequence	6863-6896	5	0.853
CP017256_5	5.1\|149973\|37\|CP017256\|PILER-CR,CRISPRCasFinder	149973-150009	37	NZ_CP006904	Clostridium botulinum 202F plasmid pCBI, complete sequence	31059-31095	6	0.838
CP017256_7	7.3\|155484\|34\|CP017256\|CRISPRCasFinder,CRT	155484-155517	34	NZ_LR214986	Mycoplasma cynos strain NCTC10142 plasmid 13	126696-126729	6	0.824
CP017256_7	7.3\|155484\|34\|CP017256\|CRISPRCasFinder,CRT	155484-155517	34	NZ_LR214986	Mycoplasma cynos strain NCTC10142 plasmid 13	131994-132027	6	0.824
CP017256_7	7.3\|155484\|34\|CP017256\|CRISPRCasFinder,CRT	155484-155517	34	NZ_LR214986	Mycoplasma cynos strain NCTC10142 plasmid 13	130268-130301	6	0.824
CP017256_7	7.8\|155813\|34\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	155813-155846	34	NZ_LR214986	Mycoplasma cynos strain NCTC10142 plasmid 13	126696-126729	6	0.824
CP017256_7	7.8\|155813\|34\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	155813-155846	34	NZ_LR214986	Mycoplasma cynos strain NCTC10142 plasmid 13	131994-132027	6	0.824
CP017256_7	7.8\|155813\|34\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	155813-155846	34	NZ_LR214986	Mycoplasma cynos strain NCTC10142 plasmid 13	130268-130301	6	0.824
CP017256_7	7.3\|155484\|34\|CP017256\|CRISPRCasFinder,CRT	155484-155517	34	NZ_CP033050	Virgibacillus halodenitrificans strain Bac324 plasmid unnamed, complete sequence	91976-92009	7	0.794
CP017256_7	7.3\|155484\|34\|CP017256\|CRISPRCasFinder,CRT	155484-155517	34	NZ_MG205641	Paeniclostridium sordellii strain 7508-A plasmid pCS1-7, complete sequence	524-557	7	0.794
CP017256_7	7.3\|155484\|34\|CP017256\|CRISPRCasFinder,CRT	155484-155517	34	NZ_MG205643	Paeniclostridium sordellii strain S0804018 plasmid pCS1-5, complete sequence	524-557	7	0.794
CP017256_7	7.3\|155484\|34\|CP017256\|CRISPRCasFinder,CRT	155484-155517	34	NZ_MG205642	Paeniclostridium sordellii strain 7543-A plasmid pCS1-6, complete sequence	524-557	7	0.794
CP017256_7	7.3\|155484\|34\|CP017256\|CRISPRCasFinder,CRT	155484-155517	34	MN693558	Marine virus AFVG_25M213, complete genome	47160-47193	7	0.794
CP017256_7	7.8\|155813\|34\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	155813-155846	34	NZ_CP033050	Virgibacillus halodenitrificans strain Bac324 plasmid unnamed, complete sequence	91976-92009	7	0.794
CP017256_7	7.8\|155813\|34\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	155813-155846	34	NZ_MG205641	Paeniclostridium sordellii strain 7508-A plasmid pCS1-7, complete sequence	524-557	7	0.794
CP017256_7	7.8\|155813\|34\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	155813-155846	34	NZ_MG205643	Paeniclostridium sordellii strain S0804018 plasmid pCS1-5, complete sequence	524-557	7	0.794
CP017256_7	7.8\|155813\|34\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	155813-155846	34	NZ_MG205642	Paeniclostridium sordellii strain 7543-A plasmid pCS1-6, complete sequence	524-557	7	0.794
CP017256_7	7.8\|155813\|34\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	155813-155846	34	MN693558	Marine virus AFVG_25M213, complete genome	47160-47193	7	0.794
CP017256_7	7.3\|155484\|34\|CP017256\|CRISPRCasFinder,CRT	155484-155517	34	MF417890	Uncultured Caudovirales phage clone 7F_15, partial genome	1458-1491	8	0.765
CP017256_7	7.3\|155484\|34\|CP017256\|CRISPRCasFinder,CRT	155484-155517	34	NC_017398	Borreliella burgdorferi N40 plasmid N40_cp32-5, complete sequence	11815-11848	8	0.765
CP017256_7	7.3\|155484\|34\|CP017256\|CRISPRCasFinder,CRT	155484-155517	34	NZ_CP019919	Borreliella burgdorferi strain PAbe plasmid p_cp32-2, complete sequence	6859-6892	8	0.765
CP017256_7	7.3\|155484\|34\|CP017256\|CRISPRCasFinder,CRT	155484-155517	34	NZ_CP019926	Borreliella burgdorferi strain PAbe plasmid p_lp56, complete sequence	10322-10355	8	0.765
CP017256_7	7.3\|155484\|34\|CP017256\|CRISPRCasFinder,CRT	155484-155517	34	NC_017402	Borreliella burgdorferi N40 plasmid N40_cp32-9, complete sequence	6858-6891	8	0.765
CP017256_7	7.3\|155484\|34\|CP017256\|CRISPRCasFinder,CRT	155484-155517	34	NC_017394	Borreliella burgdorferi JD1 plasmid JD1 cp32-1+5, complete sequence	6832-6865	8	0.765
CP017256_7	7.3\|155484\|34\|CP017256\|CRISPRCasFinder,CRT	155484-155517	34	NC_017394	Borreliella burgdorferi JD1 plasmid JD1 cp32-1+5, complete sequence	37498-37531	8	0.765
CP017256_7	7.3\|155484\|34\|CP017256\|CRISPRCasFinder,CRT	155484-155517	34	NZ_CP013684	Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence	162739-162772	8	0.765
CP017256_7	7.3\|155484\|34\|CP017256\|CRISPRCasFinder,CRT	155484-155517	34	NZ_CP028881	Borreliella bavariensis PBi plasmid cp32-7, complete sequence	26574-26607	8	0.765
CP017256_7	7.3\|155484\|34\|CP017256\|CRISPRCasFinder,CRT	155484-155517	34	NC_000951	Borreliella burgdorferi B31 plasmid cp32-6, complete sequence	6862-6895	8	0.765
CP017256_7	7.3\|155484\|34\|CP017256\|CRISPRCasFinder,CRT	155484-155517	34	NC_000952	Borreliella burgdorferi B31 plasmid cp32-7, complete sequence	6854-6887	8	0.765
CP017256_7	7.3\|155484\|34\|CP017256\|CRISPRCasFinder,CRT	155484-155517	34	NC_000956	Borreliella burgdorferi B31 plasmid lp56, complete sequence	10322-10355	8	0.765
CP017256_7	7.3\|155484\|34\|CP017256\|CRISPRCasFinder,CRT	155484-155517	34	NZ_CP019855	Borreliella burgdorferi plasmid lp56, complete sequence	10322-10355	8	0.765
CP017256_7	7.3\|155484\|34\|CP017256\|CRISPRCasFinder,CRT	155484-155517	34	NZ_CP019757	Borreliella burgdorferi strain B31_NRZ isolate B31 plasmid p_cp32-2, complete sequence	6859-6892	8	0.765
CP017256_7	7.3\|155484\|34\|CP017256\|CRISPRCasFinder,CRT	155484-155517	34	NZ_CP019766	Borreliella burgdorferi strain B31_NRZ isolate B31 plasmid p_lp56, complete sequence	10302-10335	8	0.765
CP017256_7	7.3\|155484\|34\|CP017256\|CRISPRCasFinder,CRT	155484-155517	34	NC_011735	Borreliella burgdorferi ZS7 plasmid ZS7_cp32-12, complete sequence	6855-6888	8	0.765
CP017256_7	7.3\|155484\|34\|CP017256\|CRISPRCasFinder,CRT	155484-155517	34	NC_011736	Borreliella burgdorferi ZS7 plasmid ZS7_cp32-4, complete sequence	6855-6888	8	0.765
CP017256_7	7.3\|155484\|34\|CP017256\|CRISPRCasFinder,CRT	155484-155517	34	NZ_CP017203	Borreliella burgdorferi strain B331 plasmid B331_cp32_1, complete sequence	6859-6892	8	0.765
CP017256_7	7.3\|155484\|34\|CP017256\|CRISPRCasFinder,CRT	155484-155517	34	NZ_CP017206	Borreliella burgdorferi strain B331 plasmid B331_cp32_4, complete sequence	6857-6890	8	0.765
CP017256_7	7.3\|155484\|34\|CP017256\|CRISPRCasFinder,CRT	155484-155517	34	NZ_CP017208	Borreliella burgdorferi strain B331 plasmid B331_cp32_6, complete sequence	6861-6894	8	0.765
CP017256_7	7.3\|155484\|34\|CP017256\|CRISPRCasFinder,CRT	155484-155517	34	NZ_CP017209	Borreliella burgdorferi strain B331 plasmid B331_cp32_7, complete sequence	6865-6898	8	0.765
CP017256_7	7.3\|155484\|34\|CP017256\|CRISPRCasFinder,CRT	155484-155517	34	MN694561	Marine virus AFVG_250M845, complete genome	3880-3913	8	0.765
CP017256_7	7.3\|155484\|34\|CP017256\|CRISPRCasFinder,CRT	155484-155517	34	MT939242	Enterococcus phage 9184, partial genome	40392-40425	8	0.765
CP017256_7	7.3\|155484\|34\|CP017256\|CRISPRCasFinder,CRT	155484-155517	34	MT080596	UNVERIFIED: Staphylococcus phage vB_SauM_EW42, complete genome	58669-58702	8	0.765
CP017256_7	7.3\|155484\|34\|CP017256\|CRISPRCasFinder,CRT	155484-155517	34	MT080593	UNVERIFIED: Staphylococcus phage vB_SauM_EW36, complete genome	126757-126790	8	0.765
CP017256_7	7.3\|155484\|34\|CP017256\|CRISPRCasFinder,CRT	155484-155517	34	NZ_CP054832	Staphylococcus saprophyticus strain UTI-045 plasmid pUTI-045-1, complete sequence	9690-9723	8	0.765
CP017256_7	7.8\|155813\|34\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	155813-155846	34	MF417890	Uncultured Caudovirales phage clone 7F_15, partial genome	1458-1491	8	0.765
CP017256_7	7.8\|155813\|34\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	155813-155846	34	NC_017398	Borreliella burgdorferi N40 plasmid N40_cp32-5, complete sequence	11815-11848	8	0.765
CP017256_7	7.8\|155813\|34\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	155813-155846	34	NZ_CP019919	Borreliella burgdorferi strain PAbe plasmid p_cp32-2, complete sequence	6859-6892	8	0.765
CP017256_7	7.8\|155813\|34\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	155813-155846	34	NZ_CP019926	Borreliella burgdorferi strain PAbe plasmid p_lp56, complete sequence	10322-10355	8	0.765
CP017256_7	7.8\|155813\|34\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	155813-155846	34	NC_017402	Borreliella burgdorferi N40 plasmid N40_cp32-9, complete sequence	6858-6891	8	0.765
CP017256_7	7.8\|155813\|34\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	155813-155846	34	NC_017394	Borreliella burgdorferi JD1 plasmid JD1 cp32-1+5, complete sequence	6832-6865	8	0.765
CP017256_7	7.8\|155813\|34\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	155813-155846	34	NC_017394	Borreliella burgdorferi JD1 plasmid JD1 cp32-1+5, complete sequence	37498-37531	8	0.765
CP017256_7	7.8\|155813\|34\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	155813-155846	34	NZ_CP013684	Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence	162739-162772	8	0.765
CP017256_7	7.8\|155813\|34\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	155813-155846	34	NZ_CP028881	Borreliella bavariensis PBi plasmid cp32-7, complete sequence	26574-26607	8	0.765
CP017256_7	7.8\|155813\|34\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	155813-155846	34	NC_000951	Borreliella burgdorferi B31 plasmid cp32-6, complete sequence	6862-6895	8	0.765
CP017256_7	7.8\|155813\|34\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	155813-155846	34	NC_000952	Borreliella burgdorferi B31 plasmid cp32-7, complete sequence	6854-6887	8	0.765
CP017256_7	7.8\|155813\|34\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	155813-155846	34	NC_000956	Borreliella burgdorferi B31 plasmid lp56, complete sequence	10322-10355	8	0.765
CP017256_7	7.8\|155813\|34\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	155813-155846	34	NZ_CP019855	Borreliella burgdorferi plasmid lp56, complete sequence	10322-10355	8	0.765
CP017256_7	7.8\|155813\|34\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	155813-155846	34	NZ_CP019757	Borreliella burgdorferi strain B31_NRZ isolate B31 plasmid p_cp32-2, complete sequence	6859-6892	8	0.765
CP017256_7	7.8\|155813\|34\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	155813-155846	34	NZ_CP019766	Borreliella burgdorferi strain B31_NRZ isolate B31 plasmid p_lp56, complete sequence	10302-10335	8	0.765
CP017256_7	7.8\|155813\|34\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	155813-155846	34	NC_011735	Borreliella burgdorferi ZS7 plasmid ZS7_cp32-12, complete sequence	6855-6888	8	0.765
CP017256_7	7.8\|155813\|34\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	155813-155846	34	NC_011736	Borreliella burgdorferi ZS7 plasmid ZS7_cp32-4, complete sequence	6855-6888	8	0.765
CP017256_7	7.8\|155813\|34\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	155813-155846	34	NZ_CP017203	Borreliella burgdorferi strain B331 plasmid B331_cp32_1, complete sequence	6859-6892	8	0.765
CP017256_7	7.8\|155813\|34\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	155813-155846	34	NZ_CP017206	Borreliella burgdorferi strain B331 plasmid B331_cp32_4, complete sequence	6857-6890	8	0.765
CP017256_7	7.8\|155813\|34\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	155813-155846	34	NZ_CP017208	Borreliella burgdorferi strain B331 plasmid B331_cp32_6, complete sequence	6861-6894	8	0.765
CP017256_7	7.8\|155813\|34\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	155813-155846	34	NZ_CP017209	Borreliella burgdorferi strain B331 plasmid B331_cp32_7, complete sequence	6865-6898	8	0.765
CP017256_7	7.8\|155813\|34\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	155813-155846	34	MN694561	Marine virus AFVG_250M845, complete genome	3880-3913	8	0.765
CP017256_7	7.8\|155813\|34\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	155813-155846	34	MT939242	Enterococcus phage 9184, partial genome	40392-40425	8	0.765
CP017256_7	7.8\|155813\|34\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	155813-155846	34	MT080596	UNVERIFIED: Staphylococcus phage vB_SauM_EW42, complete genome	58669-58702	8	0.765
CP017256_7	7.8\|155813\|34\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	155813-155846	34	MT080593	UNVERIFIED: Staphylococcus phage vB_SauM_EW36, complete genome	126757-126790	8	0.765
CP017256_7	7.8\|155813\|34\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	155813-155846	34	NZ_CP054832	Staphylococcus saprophyticus strain UTI-045 plasmid pUTI-045-1, complete sequence	9690-9723	8	0.765
CP017256_7	7.3\|155484\|34\|CP017256\|CRISPRCasFinder,CRT	155484-155517	34	HQ316580	Vibrio phage douglas 12A4 genomic sequence	54573-54606	9	0.735
CP017256_7	7.3\|155484\|34\|CP017256\|CRISPRCasFinder,CRT	155484-155517	34	AP014363	Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S41-C2, * SEQUENCING IN PROGRESS *	36506-36539	9	0.735
CP017256_7	7.8\|155813\|34\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	155813-155846	34	HQ316580	Vibrio phage douglas 12A4 genomic sequence	54573-54606	9	0.735
CP017256_7	7.8\|155813\|34\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	155813-155846	34	AP014363	Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S41-C2, * SEQUENCING IN PROGRESS *	36506-36539	9	0.735
CP017256_7	7.3\|155484\|34\|CP017256\|CRISPRCasFinder,CRT	155484-155517	34	NZ_CP032533	Bacillus megaterium NCT-2 plasmid pNCT2_5, complete sequence	12539-12572	10	0.706
CP017256_7	7.8\|155813\|34\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	155813-155846	34	NZ_CP032533	Bacillus megaterium NCT-2 plasmid pNCT2_5, complete sequence	12539-12572	10	0.706
CP017256_7	7.3\|155484\|34\|CP017256\|CRISPRCasFinder,CRT	155484-155517	34	NZ_CP035096	Bacillus megaterium NBRC 15308 = ATCC 14581 plasmid unnamed2, complete sequence	6817-6850	11	0.676
CP017256_7	7.3\|155484\|34\|CP017256\|CRISPRCasFinder,CRT	155484-155517	34	NZ_CP009919	Bacillus megaterium NBRC 15308 = ATCC 14581 plasmid pBMV_1, complete sequence	27501-27534	11	0.676
CP017256_7	7.8\|155813\|34\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	155813-155846	34	NZ_CP035096	Bacillus megaterium NBRC 15308 = ATCC 14581 plasmid unnamed2, complete sequence	6817-6850	11	0.676
CP017256_7	7.8\|155813\|34\|CP017256\|CRISPRCasFinder,CRT,PILER-CR	155813-155846	34	NZ_CP009919	Bacillus megaterium NBRC 15308 = ATCC 14581 plasmid pBMV_1, complete sequence	27501-27534	11	0.676

1. spacer 1.1|8373|35|CP017256|CRISPRCasFinder,CRT matches to NZ_CP017256 (Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence) position: , mismatch: 0, identity: 1.0

agtcatacaacttctgttgacttgtcccctttaat	CRISPR spacer
agtcatacaacttctgttgacttgtcccctttaat	Protospacer
***********************************

2. spacer 1.2|8438|36|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017256 (Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence) position: , mismatch: 0, identity: 1.0

agattcttgctattcattacttgaagaaataataac	CRISPR spacer
agattcttgctattcattacttgaagaaataataac	Protospacer
************************************

3. spacer 1.3|8504|37|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017256 (Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence) position: , mismatch: 0, identity: 1.0

gaagaagtgtggtcagatggttctagcacttataatg	CRISPR spacer
gaagaagtgtggtcagatggttctagcacttataatg	Protospacer
*************************************

4. spacer 1.4|8571|34|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017256 (Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence) position: , mismatch: 0, identity: 1.0

atgaagatatgtcttatttattatgtattctaaa	CRISPR spacer
atgaagatatgtcttatttattatgtattctaaa	Protospacer
**********************************

5. spacer 1.5|8635|36|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017256 (Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence) position: , mismatch: 0, identity: 1.0

tcttaaaactaaaatggctaatactaagagtgaagc	CRISPR spacer
tcttaaaactaaaatggctaatactaagagtgaagc	Protospacer
************************************

6. spacer 1.6|8701|36|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017256 (Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence) position: , mismatch: 0, identity: 1.0

agtttgtgaaaatggaatatatagaaccacagaagt	CRISPR spacer
agtttgtgaaaatggaatatatagaaccacagaagt	Protospacer
************************************

7. spacer 1.7|8767|37|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017256 (Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence) position: , mismatch: 0, identity: 1.0

agtgtaactccccattgccccgttactagggcttcca	CRISPR spacer
agtgtaactccccattgccccgttactagggcttcca	Protospacer
*************************************

8. spacer 1.8|8834|36|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017256 (Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence) position: , mismatch: 0, identity: 1.0

aacctataagtgcaaatgttgtggtgctagtgtacc	CRISPR spacer
aacctataagtgcaaatgttgtggtgctagtgtacc	Protospacer
************************************

9. spacer 1.9|8900|35|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017256 (Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence) position: , mismatch: 0, identity: 1.0

attggtttaatatttttacttccacagtaaggaca	CRISPR spacer
attggtttaatatttttacttccacagtaaggaca	Protospacer
***********************************

10. spacer 2.1|44045|39|CP017256|CRISPRCasFinder matches to NZ_CP017256 (Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence) position: , mismatch: 0, identity: 1.0

tctgtgcaaggtctgacgaaggaatgcgacctagagggt	CRISPR spacer
tctgtgcaaggtctgacgaaggaatgcgacctagagggt	Protospacer
***************************************

11. spacer 3.1|44232|38|CP017256|CRISPRCasFinder matches to NZ_CP017256 (Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence) position: , mismatch: 0, identity: 1.0

cctatgcaagagaaagggaatttaaaaggaatgaagat	CRISPR spacer
cctatgcaagagaaagggaatttaaaaggaatgaagat	Protospacer
**************************************

12. spacer 4.1|44389|38|CP017256|CRISPRCasFinder matches to NZ_CP017256 (Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence) position: , mismatch: 0, identity: 1.0

tttctgcaaaaaaaggacaatttccagttaagtaagga	CRISPR spacer
tttctgcaaaaaaaggacaatttccagttaagtaagga	Protospacer
**************************************

13. spacer 5.1|149973|37|CP017256|PILER-CR,CRISPRCasFinder matches to NZ_CP017256 (Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence) position: , mismatch: 0, identity: 1.0

gccttggctatttggattagtaagggaggcattttaa	CRISPR spacer
gccttggctatttggattagtaagggaggcattttaa	Protospacer
*************************************

14. spacer 5.2|150040|35|CP017256|PILER-CR,CRISPRCasFinder matches to NZ_CP017256 (Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence) position: , mismatch: 0, identity: 1.0

tctctaacacattattcattaactttatctagtgg	CRISPR spacer
tctctaacacattattcattaactttatctagtgg	Protospacer
***********************************

15. spacer 6.1|154076|22|CP017256|CRISPRCasFinder matches to NZ_CP017256 (Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence) position: , mismatch: 0, identity: 1.0

agtgtctatgaactttattata	CRISPR spacer
agtgtctatgaactttattata	Protospacer
**********************

16. spacer 6.2|154078|25|CP017256|PILER-CR matches to NZ_CP017256 (Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence) position: , mismatch: 0, identity: 1.0

agtgtctatgaactttattatacaa	CRISPR spacer
agtgtctatgaactttattatacaa	Protospacer
*************************

17. spacer 6.3|154130|19|CP017256|PILER-CR matches to NZ_CP017256 (Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence) position: , mismatch: 0, identity: 1.0

gtatcttctacgctagaac	CRISPR spacer
gtatcttctacgctagaac	Protospacer
*******************

18. spacer 7.1|155351|36|CP017256|CRISPRCasFinder,CRT matches to NZ_CP017256 (Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence) position: , mismatch: 0, identity: 1.0

tagtgatggggtaatactctctatgcatcaaatagg	CRISPR spacer
tagtgatggggtaatactctctatgcatcaaatagg	Protospacer
************************************

19. spacer 7.2|155417|37|CP017256|CRISPRCasFinder,CRT matches to NZ_CP017256 (Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence) position: , mismatch: 0, identity: 1.0

aagagacagctaagacaataagaagtacattaatata	CRISPR spacer
aagagacagctaagacaataagaagtacattaatata	Protospacer
*************************************

20. spacer 7.2|155417|37|CP017256|CRISPRCasFinder,CRT matches to NZ_CP017256 (Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence) position: , mismatch: 0, identity: 1.0

aagagacagctaagacaataagaagtacattaatata	CRISPR spacer
aagagacagctaagacaataagaagtacattaatata	Protospacer
*************************************

21. spacer 7.3|155484|34|CP017256|CRISPRCasFinder,CRT matches to NZ_CP017256 (Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence) position: , mismatch: 0, identity: 1.0

aagaattaaaaaaacaaattgaaacattacaaaa	CRISPR spacer
aagaattaaaaaaacaaattgaaacattacaaaa	Protospacer
**********************************

22. spacer 7.3|155484|34|CP017256|CRISPRCasFinder,CRT matches to NZ_CP017256 (Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence) position: , mismatch: 0, identity: 1.0

aagaattaaaaaaacaaattgaaacattacaaaa	CRISPR spacer
aagaattaaaaaaacaaattgaaacattacaaaa	Protospacer
**********************************

23. spacer 7.4|155548|36|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017256 (Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence) position: , mismatch: 0, identity: 1.0

atatcagtaacggataaataaaattttctcatagtt	CRISPR spacer
atatcagtaacggataaataaaattttctcatagtt	Protospacer
************************************

24. spacer 7.4|155548|36|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017256 (Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence) position: , mismatch: 0, identity: 1.0

atatcagtaacggataaataaaattttctcatagtt	CRISPR spacer
atatcagtaacggataaataaaattttctcatagtt	Protospacer
************************************

25. spacer 7.5|155614|36|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017256 (Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence) position: , mismatch: 0, identity: 1.0

attcattctaggttctaattcactatctatatttat	CRISPR spacer
attcattctaggttctaattcactatctatatttat	Protospacer
************************************

26. spacer 7.5|155614|36|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017256 (Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence) position: , mismatch: 0, identity: 1.0

attcattctaggttctaattcactatctatatttat	CRISPR spacer
attcattctaggttctaattcactatctatatttat	Protospacer
************************************

27. spacer 7.6|155680|36|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017256 (Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence) position: , mismatch: 0, identity: 1.0

gacatgtatcgaagtatatgaaatggttctaagaga	CRISPR spacer
gacatgtatcgaagtatatgaaatggttctaagaga	Protospacer
************************************

28. spacer 7.6|155680|36|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017256 (Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence) position: , mismatch: 0, identity: 1.0

gacatgtatcgaagtatatgaaatggttctaagaga	CRISPR spacer
gacatgtatcgaagtatatgaaatggttctaagaga	Protospacer
************************************

29. spacer 7.7|155746|37|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017256 (Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence) position: , mismatch: 0, identity: 1.0

aagagacagctaagacaataagaagtacattaatata	CRISPR spacer
aagagacagctaagacaataagaagtacattaatata	Protospacer
*************************************

30. spacer 7.7|155746|37|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017256 (Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence) position: , mismatch: 0, identity: 1.0

aagagacagctaagacaataagaagtacattaatata	CRISPR spacer
aagagacagctaagacaataagaagtacattaatata	Protospacer
*************************************

31. spacer 7.8|155813|34|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017256 (Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence) position: , mismatch: 0, identity: 1.0

aagaattaaaaaaacaaattgaaacattacaaaa	CRISPR spacer
aagaattaaaaaaacaaattgaaacattacaaaa	Protospacer
**********************************

32. spacer 7.8|155813|34|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017256 (Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence) position: , mismatch: 0, identity: 1.0

aagaattaaaaaaacaaattgaaacattacaaaa	CRISPR spacer
aagaattaaaaaaacaaattgaaacattacaaaa	Protospacer
**********************************

33. spacer 7.9|155877|36|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017256 (Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence) position: , mismatch: 0, identity: 1.0

atatcagtaacggataaataaaattttctcatagtt	CRISPR spacer
atatcagtaacggataaataaaattttctcatagtt	Protospacer
************************************

34. spacer 7.9|155877|36|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017256 (Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence) position: , mismatch: 0, identity: 1.0

atatcagtaacggataaataaaattttctcatagtt	CRISPR spacer
atatcagtaacggataaataaaattttctcatagtt	Protospacer
************************************

35. spacer 7.10|155943|36|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017256 (Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence) position: , mismatch: 0, identity: 1.0

attcattctaggttctaattcactatctatatttat	CRISPR spacer
attcattctaggttctaattcactatctatatttat	Protospacer
************************************

36. spacer 7.10|155943|36|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017256 (Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence) position: , mismatch: 0, identity: 1.0

attcattctaggttctaattcactatctatatttat	CRISPR spacer
attcattctaggttctaattcactatctatatttat	Protospacer
************************************

37. spacer 7.11|156009|36|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017256 (Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence) position: , mismatch: 0, identity: 1.0

gacatgtatcgaagtatatgaaatggttctaagaga	CRISPR spacer
gacatgtatcgaagtatatgaaatggttctaagaga	Protospacer
************************************

38. spacer 7.11|156009|36|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017256 (Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence) position: , mismatch: 0, identity: 1.0

gacatgtatcgaagtatatgaaatggttctaagaga	CRISPR spacer
gacatgtatcgaagtatatgaaatggttctaagaga	Protospacer
************************************

39. spacer 7.12|156075|35|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017256 (Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence) position: , mismatch: 0, identity: 1.0

tttattctataattttcccccatctcaatacgcac	CRISPR spacer
tttattctataattttcccccatctcaatacgcac	Protospacer
***********************************

40. spacer 7.3|155484|34|CP017256|CRISPRCasFinder,CRT matches to MN694411 (Marine virus AFVG_250M1188, complete genome) position: , mismatch: 5, identity: 0.853

aagaattaaaaaaacaaattgaaacattacaaaa	CRISPR spacer
aagaattattaaaacaaattgaaacattaaatac	Protospacer
********  ******************* * *

41. spacer 7.3|155484|34|CP017256|CRISPRCasFinder,CRT matches to MN693004 (Marine virus AFVG_117M22, complete genome) position: , mismatch: 5, identity: 0.853

aagaattaaaaaaacaaattgaaacattacaaaa	CRISPR spacer
aagaattattaaaacaaattgaaacattaaatac	Protospacer
********  ******************* * *

42. spacer 7.3|155484|34|CP017256|CRISPRCasFinder,CRT matches to NZ_LR214986 (Mycoplasma cynos strain NCTC10142 plasmid 13) position: , mismatch: 5, identity: 0.853

aagaattaaaaaaacaaattgaaacattacaaaa--	CRISPR spacer
aagaattaaaaaaagaaattgaaac--tgcaaattc	Protospacer
************** **********  *.****

43. spacer 7.3|155484|34|CP017256|CRISPRCasFinder,CRT matches to NC_019005 (Borrelia burgdorferi 297 plasmid 297_cp32-6, complete sequence) position: , mismatch: 5, identity: 0.853

aagaatta-aaaaaacaaattgaaacattacaaaa	CRISPR spacer
-ataattatgaaaaacaaattgaaactttagaaaa	Protospacer
 * ***** .**************** *** ****

44. spacer 7.3|155484|34|CP017256|CRISPRCasFinder,CRT matches to NZ_CP019918 (Borreliella burgdorferi strain PAbe plasmid p_cp32-5-1, complete sequence) position: , mismatch: 5, identity: 0.853

aagaatta-aaaaaacaaattgaaacattacaaaa	CRISPR spacer
-ataattatgaaaaacaaattgaaactttagaaaa	Protospacer
 * ***** .**************** *** ****

45. spacer 7.3|155484|34|CP017256|CRISPRCasFinder,CRT matches to NZ_CP019918 (Borreliella burgdorferi strain PAbe plasmid p_cp32-5-1, complete sequence) position: , mismatch: 5, identity: 0.853

aagaatta-aaaaaacaaattgaaacattacaaaa	CRISPR spacer
-ataattatgaaaaacaaattgaaactttagaaaa	Protospacer
 * ***** .**************** *** ****

46. spacer 7.3|155484|34|CP017256|CRISPRCasFinder,CRT matches to NZ_CP019921 (Borreliella burgdorferi strain PAbe plasmid p_cp32-9-4, complete sequence) position: , mismatch: 5, identity: 0.853

aagaatta-aaaaaacaaattgaaacattacaaaa	CRISPR spacer
-ataattatgaaaaacaaattgaaactttagaaaa	Protospacer
 * ***** .**************** *** ****

47. spacer 7.3|155484|34|CP017256|CRISPRCasFinder,CRT matches to NZ_CP019921 (Borreliella burgdorferi strain PAbe plasmid p_cp32-9-4, complete sequence) position: , mismatch: 5, identity: 0.853

aagaatta-aaaaaacaaattgaaacattacaaaa	CRISPR spacer
-ataattatgaaaaacaaattgaaactttagaaaa	Protospacer
 * ***** .**************** *** ****

48. spacer 7.3|155484|34|CP017256|CRISPRCasFinder,CRT matches to NC_018984 (Borrelia burgdorferi 297 plasmid 297_cp32-4, complete sequence) position: , mismatch: 5, identity: 0.853

aagaatta-aaaaaacaaattgaaacattacaaaa	CRISPR spacer
-ataattatgaaaaacaaattgaaactttagaaaa	Protospacer
 * ***** .**************** *** ****

49. spacer 7.3|155484|34|CP017256|CRISPRCasFinder,CRT matches to NC_017428 (Borreliella burgdorferi JD1 plasmid JD1 cp32-10, complete sequence) position: , mismatch: 5, identity: 0.853

aagaatta-aaaaaacaaattgaaacattacaaaa	CRISPR spacer
-ataattatgaaaaacaaattgaaactttagaaaa	Protospacer
 * ***** .**************** *** ****

50. spacer 7.3|155484|34|CP017256|CRISPRCasFinder,CRT matches to NC_017393 (Borreliella burgdorferi JD1 plasmid JD1 cp32-11, complete sequence) position: , mismatch: 5, identity: 0.853

aagaatta-aaaaaacaaattgaaacattacaaaa	CRISPR spacer
-ataattatgaaaaacaaattgaaactttagaaaa	Protospacer
 * ***** .**************** *** ****

51. spacer 7.3|155484|34|CP017256|CRISPRCasFinder,CRT matches to NC_017396 (Borreliella burgdorferi JD1 plasmid JD1 cp32-12, complete sequence) position: , mismatch: 5, identity: 0.853

aagaatta-aaaaaacaaattgaaacattacaaaa	CRISPR spacer
-ataattatgaaaaacaaattgaaactttagaaaa	Protospacer
 * ***** .**************** *** ****

52. spacer 7.3|155484|34|CP017256|CRISPRCasFinder,CRT matches to NC_017397 (Borreliella burgdorferi JD1 plasmid JD1 cp32-9, complete sequence) position: , mismatch: 5, identity: 0.853

aagaatta-aaaaaacaaattgaaacattacaaaa	CRISPR spacer
-ataattatgaaaaacaaattgaaactttagaaaa	Protospacer
 * ***** .**************** *** ****

53. spacer 7.3|155484|34|CP017256|CRISPRCasFinder,CRT matches to NZ_CP031408 (Borreliella burgdorferi strain MM1 plasmid plsm_cp32-1, complete sequence) position: , mismatch: 5, identity: 0.853

aagaatta-aaaaaacaaattgaaacattacaaaa	CRISPR spacer
-ataattatgaaaaacaaattgaaactttagaaaa	Protospacer
 * ***** .**************** *** ****

54. spacer 7.3|155484|34|CP017256|CRISPRCasFinder,CRT matches to NC_011722 (Borreliella burgdorferi ZS7 plasmid ZS7_cp32-9, complete sequence) position: , mismatch: 5, identity: 0.853

aagaatta-aaaaaacaaattgaaacattacaaaa	CRISPR spacer
-ataattatgaaaaacaaattgaaactttagaaaa	Protospacer
 * ***** .**************** *** ****

55. spacer 7.3|155484|34|CP017256|CRISPRCasFinder,CRT matches to NC_000948 (Borreliella burgdorferi B31 plasmid cp32-1, complete sequence) position: , mismatch: 5, identity: 0.853

aagaatta-aaaaaacaaattgaaacattacaaaa	CRISPR spacer
-ataattatgaaaaacaaattgaaactttagaaaa	Protospacer
 * ***** .**************** *** ****

56. spacer 7.3|155484|34|CP017256|CRISPRCasFinder,CRT matches to NC_000949 (Borreliella burgdorferi B31 plasmid cp32-3, complete sequence) position: , mismatch: 5, identity: 0.853

aagaatta-aaaaaacaaattgaaacattacaaaa	CRISPR spacer
-ataattatgaaaaacaaattgaaactttagaaaa	Protospacer
 * ***** .**************** *** ****

57. spacer 7.3|155484|34|CP017256|CRISPRCasFinder,CRT matches to NC_000953 (Borreliella burgdorferi B31 plasmid cp32-8, complete sequence) position: , mismatch: 5, identity: 0.853

aagaatta-aaaaaacaaattgaaacattacaaaa	CRISPR spacer
-ataattatgaaaaacaaattgaaactttagaaaa	Protospacer
 * ***** .**************** *** ****

58. spacer 7.3|155484|34|CP017256|CRISPRCasFinder,CRT matches to NC_000954 (Borreliella burgdorferi B31 plasmid cp32-9, complete sequence) position: , mismatch: 5, identity: 0.853

aagaatta-aaaaaacaaattgaaacattacaaaa	CRISPR spacer
-ataattatgaaaaacaaattgaaactttagaaaa	Protospacer
 * ***** .**************** *** ****

59. spacer 7.3|155484|34|CP017256|CRISPRCasFinder,CRT matches to NZ_CP019846 (Borreliella burgdorferi plasmid cp32-1, complete sequence) position: , mismatch: 5, identity: 0.853

aagaatta-aaaaaacaaattgaaacattacaaaa	CRISPR spacer
-ataattatgaaaaacaaattgaaactttagaaaa	Protospacer
 * ***** .**************** *** ****

60. spacer 7.3|155484|34|CP017256|CRISPRCasFinder,CRT matches to NZ_CP019847 (Borreliella burgdorferi plasmid cp32-3, complete sequence) position: , mismatch: 5, identity: 0.853

aagaatta-aaaaaacaaattgaaacattacaaaa	CRISPR spacer
-ataattatgaaaaacaaattgaaactttagaaaa	Protospacer
 * ***** .**************** *** ****

61. spacer 7.3|155484|34|CP017256|CRISPRCasFinder,CRT matches to NZ_CP019848 (Borreliella burgdorferi plasmid cp32-4, complete sequence) position: , mismatch: 5, identity: 0.853

aagaatta-aaaaaacaaattgaaacattacaaaa	CRISPR spacer
-ataattatgaaaaacaaattgaaactttagaaaa	Protospacer
 * ***** .**************** *** ****

62. spacer 7.3|155484|34|CP017256|CRISPRCasFinder,CRT matches to NZ_CP019849 (Borreliella burgdorferi plasmid cp32-5, complete sequence) position: , mismatch: 5, identity: 0.853

aagaatta-aaaaaacaaattgaaacattacaaaa	CRISPR spacer
-ataattatgaaaaacaaattgaaactttagaaaa	Protospacer
 * ***** .**************** *** ****

63. spacer 7.3|155484|34|CP017256|CRISPRCasFinder,CRT matches to NZ_CP019850 (Borreliella burgdorferi plasmid cp32-9, complete sequence) position: , mismatch: 5, identity: 0.853

aagaatta-aaaaaacaaattgaaacattacaaaa	CRISPR spacer
-ataattatgaaaaacaaattgaaactttagaaaa	Protospacer
 * ***** .**************** *** ****

64. spacer 7.3|155484|34|CP017256|CRISPRCasFinder,CRT matches to NZ_CP019756 (Borreliella burgdorferi strain B31_NRZ isolate B31 plasmid p_cp32-1_1, complete sequence) position: , mismatch: 5, identity: 0.853

aagaatta-aaaaaacaaattgaaacattacaaaa	CRISPR spacer
-ataattatgaaaaacaaattgaaactttagaaaa	Protospacer
 * ***** .**************** *** ****

65. spacer 7.3|155484|34|CP017256|CRISPRCasFinder,CRT matches to NZ_CP019756 (Borreliella burgdorferi strain B31_NRZ isolate B31 plasmid p_cp32-1_1, complete sequence) position: , mismatch: 5, identity: 0.853

aagaatta-aaaaaacaaattgaaacattacaaaa	CRISPR spacer
-ataattatgaaaaacaaattgaaactttagaaaa	Protospacer
 * ***** .**************** *** ****

66. spacer 7.3|155484|34|CP017256|CRISPRCasFinder,CRT matches to NZ_CP019758 (Borreliella burgdorferi strain B31_NRZ isolate B31 plasmid p_cp32-3, complete sequence) position: , mismatch: 5, identity: 0.853

aagaatta-aaaaaacaaattgaaacattacaaaa	CRISPR spacer
-ataattatgaaaaacaaattgaaactttagaaaa	Protospacer
 * ***** .**************** *** ****

67. spacer 7.3|155484|34|CP017256|CRISPRCasFinder,CRT matches to NZ_CP019759 (Borreliella burgdorferi strain B31_NRZ isolate B31 plasmid p_cp32-4, complete sequence) position: , mismatch: 5, identity: 0.853

aagaatta-aaaaaacaaattgaaacattacaaaa	CRISPR spacer
-ataattatgaaaaacaaattgaaactttagaaaa	Protospacer
 * ***** .**************** *** ****

68. spacer 7.3|155484|34|CP017256|CRISPRCasFinder,CRT matches to NZ_CP019760 (Borreliella burgdorferi strain B31_NRZ isolate B31 plasmid p_cp32-9, complete sequence) position: , mismatch: 5, identity: 0.853

aagaatta-aaaaaacaaattgaaacattacaaaa	CRISPR spacer
-ataattatgaaaaacaaattgaaactttagaaaa	Protospacer
 * ***** .**************** *** ****

69. spacer 7.3|155484|34|CP017256|CRISPRCasFinder,CRT matches to NZ_CP015798 (Borrelia mayonii strain MN14-1539 plasmid cp32-1, complete sequence) position: , mismatch: 5, identity: 0.853

aagaatta-aaaaaacaaattgaaacattacaaaa	CRISPR spacer
-ataattatgaaaaacaaattgaaactttagaaaa	Protospacer
 * ***** .**************** *** ****

70. spacer 7.3|155484|34|CP017256|CRISPRCasFinder,CRT matches to NC_011731 (Borreliella burgdorferi ZS7 plasmid ZS7_cp32-1, complete sequence) position: , mismatch: 5, identity: 0.853

aagaatta-aaaaaacaaattgaaacattacaaaa	CRISPR spacer
-ataattatgaaaaacaaattgaaactttagaaaa	Protospacer
 * ***** .**************** *** ****

71. spacer 7.3|155484|34|CP017256|CRISPRCasFinder,CRT matches to NZ_CP017204 (Borreliella burgdorferi strain B331 plasmid B331_cp32_10, complete sequence) position: , mismatch: 5, identity: 0.853

aagaatta-aaaaaacaaattgaaacattacaaaa	CRISPR spacer
-ataattatgaaaaacaaattgaaactttagaaaa	Protospacer
 * ***** .**************** *** ****

72. spacer 7.8|155813|34|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to MN694411 (Marine virus AFVG_250M1188, complete genome) position: , mismatch: 5, identity: 0.853

aagaattaaaaaaacaaattgaaacattacaaaa	CRISPR spacer
aagaattattaaaacaaattgaaacattaaatac	Protospacer
********  ******************* * *

73. spacer 7.8|155813|34|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to MN693004 (Marine virus AFVG_117M22, complete genome) position: , mismatch: 5, identity: 0.853

aagaattaaaaaaacaaattgaaacattacaaaa	CRISPR spacer
aagaattattaaaacaaattgaaacattaaatac	Protospacer
********  ******************* * *

74. spacer 7.8|155813|34|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR214986 (Mycoplasma cynos strain NCTC10142 plasmid 13) position: , mismatch: 5, identity: 0.853

aagaattaaaaaaacaaattgaaacattacaaaa--	CRISPR spacer
aagaattaaaaaaagaaattgaaac--tgcaaattc	Protospacer
************** **********  *.****

75. spacer 7.8|155813|34|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to NC_019005 (Borrelia burgdorferi 297 plasmid 297_cp32-6, complete sequence) position: , mismatch: 5, identity: 0.853

aagaatta-aaaaaacaaattgaaacattacaaaa	CRISPR spacer
-ataattatgaaaaacaaattgaaactttagaaaa	Protospacer
 * ***** .**************** *** ****

76. spacer 7.8|155813|34|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019918 (Borreliella burgdorferi strain PAbe plasmid p_cp32-5-1, complete sequence) position: , mismatch: 5, identity: 0.853

aagaatta-aaaaaacaaattgaaacattacaaaa	CRISPR spacer
-ataattatgaaaaacaaattgaaactttagaaaa	Protospacer
 * ***** .**************** *** ****

77. spacer 7.8|155813|34|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019918 (Borreliella burgdorferi strain PAbe plasmid p_cp32-5-1, complete sequence) position: , mismatch: 5, identity: 0.853

aagaatta-aaaaaacaaattgaaacattacaaaa	CRISPR spacer
-ataattatgaaaaacaaattgaaactttagaaaa	Protospacer
 * ***** .**************** *** ****

78. spacer 7.8|155813|34|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019921 (Borreliella burgdorferi strain PAbe plasmid p_cp32-9-4, complete sequence) position: , mismatch: 5, identity: 0.853

aagaatta-aaaaaacaaattgaaacattacaaaa	CRISPR spacer
-ataattatgaaaaacaaattgaaactttagaaaa	Protospacer
 * ***** .**************** *** ****

79. spacer 7.8|155813|34|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019921 (Borreliella burgdorferi strain PAbe plasmid p_cp32-9-4, complete sequence) position: , mismatch: 5, identity: 0.853

aagaatta-aaaaaacaaattgaaacattacaaaa	CRISPR spacer
-ataattatgaaaaacaaattgaaactttagaaaa	Protospacer
 * ***** .**************** *** ****

80. spacer 7.8|155813|34|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to NC_018984 (Borrelia burgdorferi 297 plasmid 297_cp32-4, complete sequence) position: , mismatch: 5, identity: 0.853

aagaatta-aaaaaacaaattgaaacattacaaaa	CRISPR spacer
-ataattatgaaaaacaaattgaaactttagaaaa	Protospacer
 * ***** .**************** *** ****

81. spacer 7.8|155813|34|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to NC_017428 (Borreliella burgdorferi JD1 plasmid JD1 cp32-10, complete sequence) position: , mismatch: 5, identity: 0.853

aagaatta-aaaaaacaaattgaaacattacaaaa	CRISPR spacer
-ataattatgaaaaacaaattgaaactttagaaaa	Protospacer
 * ***** .**************** *** ****

82. spacer 7.8|155813|34|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to NC_017393 (Borreliella burgdorferi JD1 plasmid JD1 cp32-11, complete sequence) position: , mismatch: 5, identity: 0.853

aagaatta-aaaaaacaaattgaaacattacaaaa	CRISPR spacer
-ataattatgaaaaacaaattgaaactttagaaaa	Protospacer
 * ***** .**************** *** ****

83. spacer 7.8|155813|34|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to NC_017396 (Borreliella burgdorferi JD1 plasmid JD1 cp32-12, complete sequence) position: , mismatch: 5, identity: 0.853

aagaatta-aaaaaacaaattgaaacattacaaaa	CRISPR spacer
-ataattatgaaaaacaaattgaaactttagaaaa	Protospacer
 * ***** .**************** *** ****

84. spacer 7.8|155813|34|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to NC_017397 (Borreliella burgdorferi JD1 plasmid JD1 cp32-9, complete sequence) position: , mismatch: 5, identity: 0.853

aagaatta-aaaaaacaaattgaaacattacaaaa	CRISPR spacer
-ataattatgaaaaacaaattgaaactttagaaaa	Protospacer
 * ***** .**************** *** ****

85. spacer 7.8|155813|34|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP031408 (Borreliella burgdorferi strain MM1 plasmid plsm_cp32-1, complete sequence) position: , mismatch: 5, identity: 0.853

aagaatta-aaaaaacaaattgaaacattacaaaa	CRISPR spacer
-ataattatgaaaaacaaattgaaactttagaaaa	Protospacer
 * ***** .**************** *** ****

86. spacer 7.8|155813|34|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to NC_011722 (Borreliella burgdorferi ZS7 plasmid ZS7_cp32-9, complete sequence) position: , mismatch: 5, identity: 0.853

aagaatta-aaaaaacaaattgaaacattacaaaa	CRISPR spacer
-ataattatgaaaaacaaattgaaactttagaaaa	Protospacer
 * ***** .**************** *** ****

87. spacer 7.8|155813|34|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to NC_000948 (Borreliella burgdorferi B31 plasmid cp32-1, complete sequence) position: , mismatch: 5, identity: 0.853

aagaatta-aaaaaacaaattgaaacattacaaaa	CRISPR spacer
-ataattatgaaaaacaaattgaaactttagaaaa	Protospacer
 * ***** .**************** *** ****

88. spacer 7.8|155813|34|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to NC_000949 (Borreliella burgdorferi B31 plasmid cp32-3, complete sequence) position: , mismatch: 5, identity: 0.853

aagaatta-aaaaaacaaattgaaacattacaaaa	CRISPR spacer
-ataattatgaaaaacaaattgaaactttagaaaa	Protospacer
 * ***** .**************** *** ****

89. spacer 7.8|155813|34|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to NC_000953 (Borreliella burgdorferi B31 plasmid cp32-8, complete sequence) position: , mismatch: 5, identity: 0.853

aagaatta-aaaaaacaaattgaaacattacaaaa	CRISPR spacer
-ataattatgaaaaacaaattgaaactttagaaaa	Protospacer
 * ***** .**************** *** ****

90. spacer 7.8|155813|34|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to NC_000954 (Borreliella burgdorferi B31 plasmid cp32-9, complete sequence) position: , mismatch: 5, identity: 0.853

aagaatta-aaaaaacaaattgaaacattacaaaa	CRISPR spacer
-ataattatgaaaaacaaattgaaactttagaaaa	Protospacer
 * ***** .**************** *** ****

91. spacer 7.8|155813|34|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019846 (Borreliella burgdorferi plasmid cp32-1, complete sequence) position: , mismatch: 5, identity: 0.853

aagaatta-aaaaaacaaattgaaacattacaaaa	CRISPR spacer
-ataattatgaaaaacaaattgaaactttagaaaa	Protospacer
 * ***** .**************** *** ****

92. spacer 7.8|155813|34|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019847 (Borreliella burgdorferi plasmid cp32-3, complete sequence) position: , mismatch: 5, identity: 0.853

aagaatta-aaaaaacaaattgaaacattacaaaa	CRISPR spacer
-ataattatgaaaaacaaattgaaactttagaaaa	Protospacer
 * ***** .**************** *** ****

93. spacer 7.8|155813|34|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019848 (Borreliella burgdorferi plasmid cp32-4, complete sequence) position: , mismatch: 5, identity: 0.853

aagaatta-aaaaaacaaattgaaacattacaaaa	CRISPR spacer
-ataattatgaaaaacaaattgaaactttagaaaa	Protospacer
 * ***** .**************** *** ****

94. spacer 7.8|155813|34|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019849 (Borreliella burgdorferi plasmid cp32-5, complete sequence) position: , mismatch: 5, identity: 0.853

aagaatta-aaaaaacaaattgaaacattacaaaa	CRISPR spacer
-ataattatgaaaaacaaattgaaactttagaaaa	Protospacer
 * ***** .**************** *** ****

95. spacer 7.8|155813|34|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019850 (Borreliella burgdorferi plasmid cp32-9, complete sequence) position: , mismatch: 5, identity: 0.853

aagaatta-aaaaaacaaattgaaacattacaaaa	CRISPR spacer
-ataattatgaaaaacaaattgaaactttagaaaa	Protospacer
 * ***** .**************** *** ****

96. spacer 7.8|155813|34|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019756 (Borreliella burgdorferi strain B31_NRZ isolate B31 plasmid p_cp32-1_1, complete sequence) position: , mismatch: 5, identity: 0.853

aagaatta-aaaaaacaaattgaaacattacaaaa	CRISPR spacer
-ataattatgaaaaacaaattgaaactttagaaaa	Protospacer
 * ***** .**************** *** ****

97. spacer 7.8|155813|34|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019756 (Borreliella burgdorferi strain B31_NRZ isolate B31 plasmid p_cp32-1_1, complete sequence) position: , mismatch: 5, identity: 0.853

aagaatta-aaaaaacaaattgaaacattacaaaa	CRISPR spacer
-ataattatgaaaaacaaattgaaactttagaaaa	Protospacer
 * ***** .**************** *** ****

98. spacer 7.8|155813|34|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019758 (Borreliella burgdorferi strain B31_NRZ isolate B31 plasmid p_cp32-3, complete sequence) position: , mismatch: 5, identity: 0.853

aagaatta-aaaaaacaaattgaaacattacaaaa	CRISPR spacer
-ataattatgaaaaacaaattgaaactttagaaaa	Protospacer
 * ***** .**************** *** ****

99. spacer 7.8|155813|34|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019759 (Borreliella burgdorferi strain B31_NRZ isolate B31 plasmid p_cp32-4, complete sequence) position: , mismatch: 5, identity: 0.853

aagaatta-aaaaaacaaattgaaacattacaaaa	CRISPR spacer
-ataattatgaaaaacaaattgaaactttagaaaa	Protospacer
 * ***** .**************** *** ****

100. spacer 7.8|155813|34|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019760 (Borreliella burgdorferi strain B31_NRZ isolate B31 plasmid p_cp32-9, complete sequence) position: , mismatch: 5, identity: 0.853

aagaatta-aaaaaacaaattgaaacattacaaaa	CRISPR spacer
-ataattatgaaaaacaaattgaaactttagaaaa	Protospacer
 * ***** .**************** *** ****

101. spacer 7.8|155813|34|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015798 (Borrelia mayonii strain MN14-1539 plasmid cp32-1, complete sequence) position: , mismatch: 5, identity: 0.853

aagaatta-aaaaaacaaattgaaacattacaaaa	CRISPR spacer
-ataattatgaaaaacaaattgaaactttagaaaa	Protospacer
 * ***** .**************** *** ****

102. spacer 7.8|155813|34|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to NC_011731 (Borreliella burgdorferi ZS7 plasmid ZS7_cp32-1, complete sequence) position: , mismatch: 5, identity: 0.853

aagaatta-aaaaaacaaattgaaacattacaaaa	CRISPR spacer
-ataattatgaaaaacaaattgaaactttagaaaa	Protospacer
 * ***** .**************** *** ****

103. spacer 7.8|155813|34|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017204 (Borreliella burgdorferi strain B331 plasmid B331_cp32_10, complete sequence) position: , mismatch: 5, identity: 0.853

aagaatta-aaaaaacaaattgaaacattacaaaa	CRISPR spacer
-ataattatgaaaaacaaattgaaactttagaaaa	Protospacer
 * ***** .**************** *** ****

104. spacer 5.1|149973|37|CP017256|PILER-CR,CRISPRCasFinder matches to NZ_CP006904 (Clostridium botulinum 202F plasmid pCBI, complete sequence) position: , mismatch: 6, identity: 0.838

gccttggctatttggattagtaagggaggcattttaa	CRISPR spacer
gccatatatgtttggattggtaagggaggcattttaa	Protospacer
*** *.  *.********.******************

105. spacer 7.3|155484|34|CP017256|CRISPRCasFinder,CRT matches to NZ_LR214986 (Mycoplasma cynos strain NCTC10142 plasmid 13) position: , mismatch: 6, identity: 0.824

aagaattaaaaaaacaaattgaaacattacaaaa--	CRISPR spacer
aagaattaaaaaaagaaattgaaac--cgcaaattc	Protospacer
************** **********  ..****

106. spacer 7.3|155484|34|CP017256|CRISPRCasFinder,CRT matches to NZ_LR214986 (Mycoplasma cynos strain NCTC10142 plasmid 13) position: , mismatch: 6, identity: 0.824

aagaattaaaaaaacaaattgaaacattacaaaa--	CRISPR spacer
aagaattaaaaaaagaaattgaaac--cgcaaattc	Protospacer
************** **********  ..****

107. spacer 7.3|155484|34|CP017256|CRISPRCasFinder,CRT matches to NZ_LR214986 (Mycoplasma cynos strain NCTC10142 plasmid 13) position: , mismatch: 6, identity: 0.824

aagaattaaaaaaacaaattgaaacattacaaaa--	CRISPR spacer
aagaattgaaaaaagaaattgaaac--tgcaaattc	Protospacer
*******.****** **********  *.****

108. spacer 7.8|155813|34|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR214986 (Mycoplasma cynos strain NCTC10142 plasmid 13) position: , mismatch: 6, identity: 0.824

aagaattaaaaaaacaaattgaaacattacaaaa--	CRISPR spacer
aagaattaaaaaaagaaattgaaac--cgcaaattc	Protospacer
************** **********  ..****

109. spacer 7.8|155813|34|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR214986 (Mycoplasma cynos strain NCTC10142 plasmid 13) position: , mismatch: 6, identity: 0.824

aagaattaaaaaaacaaattgaaacattacaaaa--	CRISPR spacer
aagaattaaaaaaagaaattgaaac--cgcaaattc	Protospacer
************** **********  ..****

110. spacer 7.8|155813|34|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR214986 (Mycoplasma cynos strain NCTC10142 plasmid 13) position: , mismatch: 6, identity: 0.824

aagaattaaaaaaacaaattgaaacattacaaaa--	CRISPR spacer
aagaattgaaaaaagaaattgaaac--tgcaaattc	Protospacer
*******.****** **********  *.****

111. spacer 7.3|155484|34|CP017256|CRISPRCasFinder,CRT matches to NZ_CP033050 (Virgibacillus halodenitrificans strain Bac324 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.794

--aagaattaaaaaaacaaattgaaacattacaaaa	CRISPR spacer
atatgaac--aaaaaacaaattgaaaaatttcaaga	Protospacer
  * ***.  **************** *** ***.*

112. spacer 7.3|155484|34|CP017256|CRISPRCasFinder,CRT matches to NZ_MG205641 (Paeniclostridium sordellii strain 7508-A plasmid pCS1-7, complete sequence) position: , mismatch: 7, identity: 0.794

aagaattaaaaaaacaaattgaaacattacaaaa	CRISPR spacer
aagaattaaaaaaagaacttgaaagtataaaaca	Protospacer
************** ** ******   ** ** *

113. spacer 7.3|155484|34|CP017256|CRISPRCasFinder,CRT matches to NZ_MG205643 (Paeniclostridium sordellii strain S0804018 plasmid pCS1-5, complete sequence) position: , mismatch: 7, identity: 0.794

aagaattaaaaaaacaaattgaaacattacaaaa	CRISPR spacer
aagaattaaaaaaagaacttgaaagtataaaaca	Protospacer
************** ** ******   ** ** *

114. spacer 7.3|155484|34|CP017256|CRISPRCasFinder,CRT matches to NZ_MG205642 (Paeniclostridium sordellii strain 7543-A plasmid pCS1-6, complete sequence) position: , mismatch: 7, identity: 0.794

aagaattaaaaaaacaaattgaaacattacaaaa	CRISPR spacer
aagaattaaaaaaagaacttgaaagtataaaaca	Protospacer
************** ** ******   ** ** *

115. spacer 7.3|155484|34|CP017256|CRISPRCasFinder,CRT matches to MN693558 (Marine virus AFVG_25M213, complete genome) position: , mismatch: 7, identity: 0.794

aagaattaa--aaaaacaaattgaaacattacaaaa	CRISPR spacer
--aatttaattaaaaacaaattgaaaaattagaaat	Protospacer
  .* ****  *************** **** ***

116. spacer 7.8|155813|34|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP033050 (Virgibacillus halodenitrificans strain Bac324 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.794

--aagaattaaaaaaacaaattgaaacattacaaaa	CRISPR spacer
atatgaac--aaaaaacaaattgaaaaatttcaaga	Protospacer
  * ***.  **************** *** ***.*

117. spacer 7.8|155813|34|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MG205641 (Paeniclostridium sordellii strain 7508-A plasmid pCS1-7, complete sequence) position: , mismatch: 7, identity: 0.794

aagaattaaaaaaacaaattgaaacattacaaaa	CRISPR spacer
aagaattaaaaaaagaacttgaaagtataaaaca	Protospacer
************** ** ******   ** ** *

118. spacer 7.8|155813|34|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MG205643 (Paeniclostridium sordellii strain S0804018 plasmid pCS1-5, complete sequence) position: , mismatch: 7, identity: 0.794

aagaattaaaaaaacaaattgaaacattacaaaa	CRISPR spacer
aagaattaaaaaaagaacttgaaagtataaaaca	Protospacer
************** ** ******   ** ** *

119. spacer 7.8|155813|34|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MG205642 (Paeniclostridium sordellii strain 7543-A plasmid pCS1-6, complete sequence) position: , mismatch: 7, identity: 0.794

aagaattaaaaaaacaaattgaaacattacaaaa	CRISPR spacer
aagaattaaaaaaagaacttgaaagtataaaaca	Protospacer
************** ** ******   ** ** *

120. spacer 7.8|155813|34|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to MN693558 (Marine virus AFVG_25M213, complete genome) position: , mismatch: 7, identity: 0.794

aagaattaa--aaaaacaaattgaaacattacaaaa	CRISPR spacer
--aatttaattaaaaacaaattgaaaaattagaaat	Protospacer
  .* ****  *************** **** ***

121. spacer 7.3|155484|34|CP017256|CRISPRCasFinder,CRT matches to MF417890 (Uncultured Caudovirales phage clone 7F_15, partial genome) position: , mismatch: 8, identity: 0.765

aagaattaaaaaaacaaattgaaacattacaaaa	CRISPR spacer
acgaattaaaagaacaaattgaaactttcttgca	Protospacer
* *********.************* ** . . *

122. spacer 7.3|155484|34|CP017256|CRISPRCasFinder,CRT matches to NC_017398 (Borreliella burgdorferi N40 plasmid N40_cp32-5, complete sequence) position: , mismatch: 8, identity: 0.765

aagaattaaaaaaacaaattgaaacattacaaaa	CRISPR spacer
ataactatgaaaaacaaattgaaactttagaaaa	Protospacer
* .* *  .**************** *** ****

123. spacer 7.3|155484|34|CP017256|CRISPRCasFinder,CRT matches to NZ_CP019919 (Borreliella burgdorferi strain PAbe plasmid p_cp32-2, complete sequence) position: , mismatch: 8, identity: 0.765

aagaattaaaaaaacaaattgaaacattacaaaa	CRISPR spacer
ataactatgaaaaacaaattgaaactttagaaaa	Protospacer
* .* *  .**************** *** ****

124. spacer 7.3|155484|34|CP017256|CRISPRCasFinder,CRT matches to NZ_CP019926 (Borreliella burgdorferi strain PAbe plasmid p_lp56, complete sequence) position: , mismatch: 8, identity: 0.765

aagaattaaaaaaacaaattgaaacattacaaaa	CRISPR spacer
ataactatgaaaaacaaattgaaactttagaaaa	Protospacer
* .* *  .**************** *** ****

125. spacer 7.3|155484|34|CP017256|CRISPRCasFinder,CRT matches to NC_017402 (Borreliella burgdorferi N40 plasmid N40_cp32-9, complete sequence) position: , mismatch: 8, identity: 0.765

aagaattaaaaaaacaaattgaaacattacaaaa	CRISPR spacer
ataactatgaaaaacaaattgaaactttagaaaa	Protospacer
* .* *  .**************** *** ****

126. spacer 7.3|155484|34|CP017256|CRISPRCasFinder,CRT matches to NC_017394 (Borreliella burgdorferi JD1 plasmid JD1 cp32-1+5, complete sequence) position: , mismatch: 8, identity: 0.765

aagaattaaaaaaacaaattgaaacattacaaaa	CRISPR spacer
ataactatgaaaaacaaattgaaactttagaaaa	Protospacer
* .* *  .**************** *** ****

127. spacer 7.3|155484|34|CP017256|CRISPRCasFinder,CRT matches to NC_017394 (Borreliella burgdorferi JD1 plasmid JD1 cp32-1+5, complete sequence) position: , mismatch: 8, identity: 0.765

aagaattaaaaaaacaaattgaaacattacaaaa	CRISPR spacer
ataactatgaaaaacaaattgaaactttagaaaa	Protospacer
* .* *  .**************** *** ****

128. spacer 7.3|155484|34|CP017256|CRISPRCasFinder,CRT matches to NZ_CP013684 (Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence) position: , mismatch: 8, identity: 0.765

aagaattaaaaaaacaaattgaaacattacaaaa	CRISPR spacer
aagaattaaaaaaagaaatagaaaaaatggaacc	Protospacer
************** **** **** * *. **

129. spacer 7.3|155484|34|CP017256|CRISPRCasFinder,CRT matches to NZ_CP028881 (Borreliella bavariensis PBi plasmid cp32-7, complete sequence) position: , mismatch: 8, identity: 0.765

aagaattaaaaaaacaaattgaaacattacaaaa	CRISPR spacer
ataactatgaaaaacaaattgaaactttagaaaa	Protospacer
* .* *  .**************** *** ****

130. spacer 7.3|155484|34|CP017256|CRISPRCasFinder,CRT matches to NC_000951 (Borreliella burgdorferi B31 plasmid cp32-6, complete sequence) position: , mismatch: 8, identity: 0.765

aagaattaaaaaaacaaattgaaacattacaaaa	CRISPR spacer
ataactatgaaaaacaaattgaaactttagaaaa	Protospacer
* .* *  .**************** *** ****

131. spacer 7.3|155484|34|CP017256|CRISPRCasFinder,CRT matches to NC_000952 (Borreliella burgdorferi B31 plasmid cp32-7, complete sequence) position: , mismatch: 8, identity: 0.765

aagaattaaaaaaacaaattgaaacattacaaaa	CRISPR spacer
ataactatgaaaaacaaattgaaactttagaaaa	Protospacer
* .* *  .**************** *** ****

132. spacer 7.3|155484|34|CP017256|CRISPRCasFinder,CRT matches to NC_000956 (Borreliella burgdorferi B31 plasmid lp56, complete sequence) position: , mismatch: 8, identity: 0.765

aagaattaaaaaaacaaattgaaacattacaaaa	CRISPR spacer
ataactatgaaaaacaaattgaaactttagaaaa	Protospacer
* .* *  .**************** *** ****

133. spacer 7.3|155484|34|CP017256|CRISPRCasFinder,CRT matches to NZ_CP019855 (Borreliella burgdorferi plasmid lp56, complete sequence) position: , mismatch: 8, identity: 0.765

aagaattaaaaaaacaaattgaaacattacaaaa	CRISPR spacer
ataactatgaaaaacaaattgaaactttagaaaa	Protospacer
* .* *  .**************** *** ****

134. spacer 7.3|155484|34|CP017256|CRISPRCasFinder,CRT matches to NZ_CP019757 (Borreliella burgdorferi strain B31_NRZ isolate B31 plasmid p_cp32-2, complete sequence) position: , mismatch: 8, identity: 0.765

aagaattaaaaaaacaaattgaaacattacaaaa	CRISPR spacer
ataactatgaaaaacaaattgaaactttagaaaa	Protospacer
* .* *  .**************** *** ****

135. spacer 7.3|155484|34|CP017256|CRISPRCasFinder,CRT matches to NZ_CP019766 (Borreliella burgdorferi strain B31_NRZ isolate B31 plasmid p_lp56, complete sequence) position: , mismatch: 8, identity: 0.765

aagaattaaaaaaacaaattgaaacattacaaaa	CRISPR spacer
ataactatgaaaaacaaattgaaactttagaaaa	Protospacer
* .* *  .**************** *** ****

136. spacer 7.3|155484|34|CP017256|CRISPRCasFinder,CRT matches to NC_011735 (Borreliella burgdorferi ZS7 plasmid ZS7_cp32-12, complete sequence) position: , mismatch: 8, identity: 0.765

aagaattaaaaaaacaaattgaaacattacaaaa	CRISPR spacer
ataactatgaaaaacaaattgaaactttagaaaa	Protospacer
* .* *  .**************** *** ****

137. spacer 7.3|155484|34|CP017256|CRISPRCasFinder,CRT matches to NC_011736 (Borreliella burgdorferi ZS7 plasmid ZS7_cp32-4, complete sequence) position: , mismatch: 8, identity: 0.765

aagaattaaaaaaacaaattgaaacattacaaaa	CRISPR spacer
ataactatgaaaaacaaattgaaactttagaaaa	Protospacer
* .* *  .**************** *** ****

138. spacer 7.3|155484|34|CP017256|CRISPRCasFinder,CRT matches to NZ_CP017203 (Borreliella burgdorferi strain B331 plasmid B331_cp32_1, complete sequence) position: , mismatch: 8, identity: 0.765

aagaattaaaaaaacaaattgaaacattacaaaa	CRISPR spacer
ataactatgaaaaacaaattgaaactttagaaaa	Protospacer
* .* *  .**************** *** ****

139. spacer 7.3|155484|34|CP017256|CRISPRCasFinder,CRT matches to NZ_CP017206 (Borreliella burgdorferi strain B331 plasmid B331_cp32_4, complete sequence) position: , mismatch: 8, identity: 0.765

aagaattaaaaaaacaaattgaaacattacaaaa	CRISPR spacer
ataactatgaaaaacaaattgaaactttagaaaa	Protospacer
* .* *  .**************** *** ****

140. spacer 7.3|155484|34|CP017256|CRISPRCasFinder,CRT matches to NZ_CP017208 (Borreliella burgdorferi strain B331 plasmid B331_cp32_6, complete sequence) position: , mismatch: 8, identity: 0.765

aagaattaaaaaaacaaattgaaacattacaaaa	CRISPR spacer
ataactatgaaaaacaaattgaaactttagaaaa	Protospacer
* .* *  .**************** *** ****

141. spacer 7.3|155484|34|CP017256|CRISPRCasFinder,CRT matches to NZ_CP017209 (Borreliella burgdorferi strain B331 plasmid B331_cp32_7, complete sequence) position: , mismatch: 8, identity: 0.765

aagaattaaaaaaacaaattgaaacattacaaaa	CRISPR spacer
ataactatgaaaaacaaattgaaactttagaaaa	Protospacer
* .* *  .**************** *** ****

142. spacer 7.3|155484|34|CP017256|CRISPRCasFinder,CRT matches to MN694561 (Marine virus AFVG_250M845, complete genome) position: , mismatch: 8, identity: 0.765

aagaattaaaaaaacaaattgaaacattacaaaa	CRISPR spacer
taggttaccaaaaaccaatagaaacattacaaaa	Protospacer
 **. *   ****** *** **************

143. spacer 7.3|155484|34|CP017256|CRISPRCasFinder,CRT matches to MT939242 (Enterococcus phage 9184, partial genome) position: , mismatch: 8, identity: 0.765

aagaattaaaaaaacaaattgaaacattacaaaa	CRISPR spacer
aagaattgaaaaaacaacttgaaaaacaaagtaa	Protospacer
*******.********* ****** *. * . **

144. spacer 7.3|155484|34|CP017256|CRISPRCasFinder,CRT matches to MT080596 (UNVERIFIED: Staphylococcus phage vB_SauM_EW42, complete genome) position: , mismatch: 8, identity: 0.765

aagaattaaaaaaacaaattg-aaacattacaaaa	CRISPR spacer
aagaattaataaaagaaattgaaaatacttttaa-	Protospacer
********* **** ****** ***.*.* . **

145. spacer 7.3|155484|34|CP017256|CRISPRCasFinder,CRT matches to MT080593 (UNVERIFIED: Staphylococcus phage vB_SauM_EW36, complete genome) position: , mismatch: 8, identity: 0.765

aagaattaaaaaaacaaattg-aaacattacaaaa	CRISPR spacer
aagaattaataaaagaaattgaaaatacttttaa-	Protospacer
********* **** ****** ***.*.* . **

146. spacer 7.3|155484|34|CP017256|CRISPRCasFinder,CRT matches to NZ_CP054832 (Staphylococcus saprophyticus strain UTI-045 plasmid pUTI-045-1, complete sequence) position: , mismatch: 8, identity: 0.765

aagaattaaaaaaacaaattgaaacattacaaaa	CRISPR spacer
atgaattaaaaaaagagattgaaacaaatgaaga	Protospacer
* ************ *.*********    **.*

147. spacer 7.8|155813|34|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to MF417890 (Uncultured Caudovirales phage clone 7F_15, partial genome) position: , mismatch: 8, identity: 0.765

aagaattaaaaaaacaaattgaaacattacaaaa	CRISPR spacer
acgaattaaaagaacaaattgaaactttcttgca	Protospacer
* *********.************* ** . . *

148. spacer 7.8|155813|34|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to NC_017398 (Borreliella burgdorferi N40 plasmid N40_cp32-5, complete sequence) position: , mismatch: 8, identity: 0.765

aagaattaaaaaaacaaattgaaacattacaaaa	CRISPR spacer
ataactatgaaaaacaaattgaaactttagaaaa	Protospacer
* .* *  .**************** *** ****

149. spacer 7.8|155813|34|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019919 (Borreliella burgdorferi strain PAbe plasmid p_cp32-2, complete sequence) position: , mismatch: 8, identity: 0.765

aagaattaaaaaaacaaattgaaacattacaaaa	CRISPR spacer
ataactatgaaaaacaaattgaaactttagaaaa	Protospacer
* .* *  .**************** *** ****

150. spacer 7.8|155813|34|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019926 (Borreliella burgdorferi strain PAbe plasmid p_lp56, complete sequence) position: , mismatch: 8, identity: 0.765

aagaattaaaaaaacaaattgaaacattacaaaa	CRISPR spacer
ataactatgaaaaacaaattgaaactttagaaaa	Protospacer
* .* *  .**************** *** ****

151. spacer 7.8|155813|34|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to NC_017402 (Borreliella burgdorferi N40 plasmid N40_cp32-9, complete sequence) position: , mismatch: 8, identity: 0.765

aagaattaaaaaaacaaattgaaacattacaaaa	CRISPR spacer
ataactatgaaaaacaaattgaaactttagaaaa	Protospacer
* .* *  .**************** *** ****

152. spacer 7.8|155813|34|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to NC_017394 (Borreliella burgdorferi JD1 plasmid JD1 cp32-1+5, complete sequence) position: , mismatch: 8, identity: 0.765

aagaattaaaaaaacaaattgaaacattacaaaa	CRISPR spacer
ataactatgaaaaacaaattgaaactttagaaaa	Protospacer
* .* *  .**************** *** ****

153. spacer 7.8|155813|34|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to NC_017394 (Borreliella burgdorferi JD1 plasmid JD1 cp32-1+5, complete sequence) position: , mismatch: 8, identity: 0.765

aagaattaaaaaaacaaattgaaacattacaaaa	CRISPR spacer
ataactatgaaaaacaaattgaaactttagaaaa	Protospacer
* .* *  .**************** *** ****

154. spacer 7.8|155813|34|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013684 (Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence) position: , mismatch: 8, identity: 0.765

aagaattaaaaaaacaaattgaaacattacaaaa	CRISPR spacer
aagaattaaaaaaagaaatagaaaaaatggaacc	Protospacer
************** **** **** * *. **

155. spacer 7.8|155813|34|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP028881 (Borreliella bavariensis PBi plasmid cp32-7, complete sequence) position: , mismatch: 8, identity: 0.765

aagaattaaaaaaacaaattgaaacattacaaaa	CRISPR spacer
ataactatgaaaaacaaattgaaactttagaaaa	Protospacer
* .* *  .**************** *** ****

156. spacer 7.8|155813|34|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to NC_000951 (Borreliella burgdorferi B31 plasmid cp32-6, complete sequence) position: , mismatch: 8, identity: 0.765

aagaattaaaaaaacaaattgaaacattacaaaa	CRISPR spacer
ataactatgaaaaacaaattgaaactttagaaaa	Protospacer
* .* *  .**************** *** ****

157. spacer 7.8|155813|34|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to NC_000952 (Borreliella burgdorferi B31 plasmid cp32-7, complete sequence) position: , mismatch: 8, identity: 0.765

aagaattaaaaaaacaaattgaaacattacaaaa	CRISPR spacer
ataactatgaaaaacaaattgaaactttagaaaa	Protospacer
* .* *  .**************** *** ****

158. spacer 7.8|155813|34|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to NC_000956 (Borreliella burgdorferi B31 plasmid lp56, complete sequence) position: , mismatch: 8, identity: 0.765

aagaattaaaaaaacaaattgaaacattacaaaa	CRISPR spacer
ataactatgaaaaacaaattgaaactttagaaaa	Protospacer
* .* *  .**************** *** ****

159. spacer 7.8|155813|34|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019855 (Borreliella burgdorferi plasmid lp56, complete sequence) position: , mismatch: 8, identity: 0.765

aagaattaaaaaaacaaattgaaacattacaaaa	CRISPR spacer
ataactatgaaaaacaaattgaaactttagaaaa	Protospacer
* .* *  .**************** *** ****

160. spacer 7.8|155813|34|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019757 (Borreliella burgdorferi strain B31_NRZ isolate B31 plasmid p_cp32-2, complete sequence) position: , mismatch: 8, identity: 0.765

aagaattaaaaaaacaaattgaaacattacaaaa	CRISPR spacer
ataactatgaaaaacaaattgaaactttagaaaa	Protospacer
* .* *  .**************** *** ****

161. spacer 7.8|155813|34|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019766 (Borreliella burgdorferi strain B31_NRZ isolate B31 plasmid p_lp56, complete sequence) position: , mismatch: 8, identity: 0.765

aagaattaaaaaaacaaattgaaacattacaaaa	CRISPR spacer
ataactatgaaaaacaaattgaaactttagaaaa	Protospacer
* .* *  .**************** *** ****

162. spacer 7.8|155813|34|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to NC_011735 (Borreliella burgdorferi ZS7 plasmid ZS7_cp32-12, complete sequence) position: , mismatch: 8, identity: 0.765

aagaattaaaaaaacaaattgaaacattacaaaa	CRISPR spacer
ataactatgaaaaacaaattgaaactttagaaaa	Protospacer
* .* *  .**************** *** ****

163. spacer 7.8|155813|34|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to NC_011736 (Borreliella burgdorferi ZS7 plasmid ZS7_cp32-4, complete sequence) position: , mismatch: 8, identity: 0.765

aagaattaaaaaaacaaattgaaacattacaaaa	CRISPR spacer
ataactatgaaaaacaaattgaaactttagaaaa	Protospacer
* .* *  .**************** *** ****

164. spacer 7.8|155813|34|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017203 (Borreliella burgdorferi strain B331 plasmid B331_cp32_1, complete sequence) position: , mismatch: 8, identity: 0.765

aagaattaaaaaaacaaattgaaacattacaaaa	CRISPR spacer
ataactatgaaaaacaaattgaaactttagaaaa	Protospacer
* .* *  .**************** *** ****

165. spacer 7.8|155813|34|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017206 (Borreliella burgdorferi strain B331 plasmid B331_cp32_4, complete sequence) position: , mismatch: 8, identity: 0.765

aagaattaaaaaaacaaattgaaacattacaaaa	CRISPR spacer
ataactatgaaaaacaaattgaaactttagaaaa	Protospacer
* .* *  .**************** *** ****

166. spacer 7.8|155813|34|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017208 (Borreliella burgdorferi strain B331 plasmid B331_cp32_6, complete sequence) position: , mismatch: 8, identity: 0.765

aagaattaaaaaaacaaattgaaacattacaaaa	CRISPR spacer
ataactatgaaaaacaaattgaaactttagaaaa	Protospacer
* .* *  .**************** *** ****

167. spacer 7.8|155813|34|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017209 (Borreliella burgdorferi strain B331 plasmid B331_cp32_7, complete sequence) position: , mismatch: 8, identity: 0.765

aagaattaaaaaaacaaattgaaacattacaaaa	CRISPR spacer
ataactatgaaaaacaaattgaaactttagaaaa	Protospacer
* .* *  .**************** *** ****

168. spacer 7.8|155813|34|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to MN694561 (Marine virus AFVG_250M845, complete genome) position: , mismatch: 8, identity: 0.765

aagaattaaaaaaacaaattgaaacattacaaaa	CRISPR spacer
taggttaccaaaaaccaatagaaacattacaaaa	Protospacer
 **. *   ****** *** **************

169. spacer 7.8|155813|34|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to MT939242 (Enterococcus phage 9184, partial genome) position: , mismatch: 8, identity: 0.765

aagaattaaaaaaacaaattgaaacattacaaaa	CRISPR spacer
aagaattgaaaaaacaacttgaaaaacaaagtaa	Protospacer
*******.********* ****** *. * . **

170. spacer 7.8|155813|34|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to MT080596 (UNVERIFIED: Staphylococcus phage vB_SauM_EW42, complete genome) position: , mismatch: 8, identity: 0.765

aagaattaaaaaaacaaattg-aaacattacaaaa	CRISPR spacer
aagaattaataaaagaaattgaaaatacttttaa-	Protospacer
********* **** ****** ***.*.* . **

171. spacer 7.8|155813|34|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to MT080593 (UNVERIFIED: Staphylococcus phage vB_SauM_EW36, complete genome) position: , mismatch: 8, identity: 0.765

aagaattaaaaaaacaaattg-aaacattacaaaa	CRISPR spacer
aagaattaataaaagaaattgaaaatacttttaa-	Protospacer
********* **** ****** ***.*.* . **

172. spacer 7.8|155813|34|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP054832 (Staphylococcus saprophyticus strain UTI-045 plasmid pUTI-045-1, complete sequence) position: , mismatch: 8, identity: 0.765

aagaattaaaaaaacaaattgaaacattacaaaa	CRISPR spacer
atgaattaaaaaaagagattgaaacaaatgaaga	Protospacer
* ************ *.*********    **.*

173. spacer 7.3|155484|34|CP017256|CRISPRCasFinder,CRT matches to HQ316580 (Vibrio phage douglas 12A4 genomic sequence) position: , mismatch: 9, identity: 0.735

aagaattaaaaaaacaaattgaaacattacaaaa	CRISPR spacer
caaacttaaaaaaacaatttggaacattaagcca	Protospacer
 *.* ************ ***.******* .  *

174. spacer 7.3|155484|34|CP017256|CRISPRCasFinder,CRT matches to AP014363 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S41-C2, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 9, identity: 0.735

aagaattaaaaaaacaaattgaaacattacaaaa------	CRISPR spacer
aagaaataaaaaaacaatttgaaa------aagatgtcga	Protospacer
***** *********** ******      **.*

175. spacer 7.8|155813|34|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to HQ316580 (Vibrio phage douglas 12A4 genomic sequence) position: , mismatch: 9, identity: 0.735

aagaattaaaaaaacaaattgaaacattacaaaa	CRISPR spacer
caaacttaaaaaaacaatttggaacattaagcca	Protospacer
 *.* ************ ***.******* .  *

176. spacer 7.8|155813|34|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to AP014363 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S41-C2, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 9, identity: 0.735

aagaattaaaaaaacaaattgaaacattacaaaa------	CRISPR spacer
aagaaataaaaaaacaatttgaaa------aagatgtcga	Protospacer
***** *********** ******      **.*

177. spacer 7.3|155484|34|CP017256|CRISPRCasFinder,CRT matches to NZ_CP032533 (Bacillus megaterium NCT-2 plasmid pNCT2_5, complete sequence) position: , mismatch: 10, identity: 0.706

aagaattaaaaaaacaaattgaaacattacaaaa	CRISPR spacer
aatttttgaaaagacaaattgaaacattagtttt	Protospacer
**   **.****.****************

178. spacer 7.8|155813|34|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032533 (Bacillus megaterium NCT-2 plasmid pNCT2_5, complete sequence) position: , mismatch: 10, identity: 0.706

aagaattaaaaaaacaaattgaaacattacaaaa	CRISPR spacer
aatttttgaaaagacaaattgaaacattagtttt	Protospacer
**   **.****.****************

179. spacer 7.3|155484|34|CP017256|CRISPRCasFinder,CRT matches to NZ_CP035096 (Bacillus megaterium NBRC 15308 = ATCC 14581 plasmid unnamed2, complete sequence) position: , mismatch: 11, identity: 0.676

aagaattaaaaaaacaaattgaaacattacaaaa	CRISPR spacer
cttttttgaaagaacaaattgaaacattatctat	Protospacer
     **.***.*****************.  *

180. spacer 7.3|155484|34|CP017256|CRISPRCasFinder,CRT matches to NZ_CP009919 (Bacillus megaterium NBRC 15308 = ATCC 14581 plasmid pBMV_1, complete sequence) position: , mismatch: 11, identity: 0.676

aagaattaaaaaaacaaattgaaacattacaaaa	CRISPR spacer
cttttttgaaagaacaaattgaaacattatctat	Protospacer
     **.***.*****************.  *

181. spacer 7.8|155813|34|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP035096 (Bacillus megaterium NBRC 15308 = ATCC 14581 plasmid unnamed2, complete sequence) position: , mismatch: 11, identity: 0.676

aagaattaaaaaaacaaattgaaacattacaaaa	CRISPR spacer
cttttttgaaagaacaaattgaaacattatctat	Protospacer
     **.***.*****************.  *

182. spacer 7.8|155813|34|CP017256|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009919 (Bacillus megaterium NBRC 15308 = ATCC 14581 plasmid pBMV_1, complete sequence) position: , mismatch: 11, identity: 0.676

aagaattaaaaaaacaaattgaaacattacaaaa	CRISPR spacer
cttttttgaaagaacaaattgaaacattatctat	Protospacer
     **.***.*****************.  *

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP017253

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. CP017256

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection