CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Prophage number
CP026585	Klebsiella pneumoniae strain WCHKP649 chromosome, complete genome	1 crisprs	csa3,RT,cas3,DEDDh,DinG,WYL	12
CP026584	Klebsiella pneumoniae strain WCHKP649 plasmid pKPC2_095649, complete sequence	0 crisprs	RT	3
CP026582	Klebsiella pneumoniae strain WCHKP649 plasmid p1_095649, complete sequence	0 crisprs	NA	0
CP026583	Klebsiella pneumoniae strain WCHKP649 plasmid p2_095649, complete sequence	0 crisprs	NA	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP026585_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP026585_1

4615053-4615147

Orphan

Consensus_repeat	Method
ACTATGGTTTTTATGGTTTTTATT	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP026585_1

>merge|CP026585|1|4615053-4615147|CRISPRCasFinder
TTAATGGTCACTATGGTTTTTATGGTTTTTATTCGCTGAACTGCCCGGGAGTGATATATCTCTGATTTATGACTGTGGTTTTTATGGTTTTTATT

>CP026585|1|1|4615053-4615147|CRISPRCasFinder
TTAATGGTCACTATGGTTTTTATG	GTTTTTATTCGCTGAACTGCCCGGGAGTGATATATCTCTGATTTATG
ACTGTGGTTTTTATGGTTTTTATT

Protein	Signature genes	Signature genes Name	Protein_function
CP026585.2\|AVE13070.1\|4617634_4618462_-\|co-chaperone-DjlA	unknown	unknown	gnl\|CDD\|236512
CP026585.2\|AVE13061.1\|4604171_4605674_+\|L-arabinose-isomerase	unknown	unknown	gnl\|CDD\|179503
CP026585.2\|AVE13062.1\|4605811_4606507_+\|L-ribulose-5-phosphate-4-epimerase	unknown	unknown	gnl\|CDD\|236181
CP026585.2\|AVE13071.1\|4618705_4621054_+\|LPS-assembly-protein-LptD	unknown	unknown	gnl\|CDD\|235158
CP026585.2\|AVE13075.1\|4624210_4624588_+\|Co2+/Mg2+-efflux-protein-ApaG	unknown	unknown	gnl\|CDD\|180098
CP026585.2\|AVE13059.1\|4601268_4602114_-\|arabinose-operon-transcriptional-regulator-AraC	unknown	unknown	gnl\|CDD\|236717
CP026585.2\|AVE13063.1\|4606682_4609040_+\|DNA-polymerase-II	unknown	unknown	gnl\|CDD\|235595
CP026585.2\|AVE13068.1\|4615288_4616914_+\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|225827
CP026585.2\|AVE14024.1\|4613382_4613571_+\|hypothetical-protein	unknown	unknown	unknown
CP026585.2\|AVE13076.1\|4624592_4625441_+\|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)	unknown	unknown	gnl\|CDD\|273208
CP026585.2\|AVE13064.1\|4609227_4612134_+\|RNA-polymerase-associated-protein-RapA	unknown	unknown	gnl\|CDD\|235319
CP026585.2\|AVE13069.1\|4616903_4617602_+\|response-regulator	unknown	unknown	gnl\|CDD\|226931
CP026585.2\|AVE13065.1\|4612146_4612806_+\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	unknown	unknown	gnl\|CDD\|236659
CP026585.2\|AVE13067.1\|4613599_4614964_-\|malate-permease	unknown	unknown	gnl\|CDD\|377030
CP026585.2\|AVE13066.1\|4612880_4613420_-\|citrate-lyase-holo-[acyl-carrier-protein]-synthase	unknown	unknown	gnl\|CDD\|163145
CP026585.2\|AVE13060.1\|4602451_4604161_+\|ribulokinase	unknown	unknown	gnl\|CDD\|235221
CP026585.2\|AVE13073.1\|4622400_4623390_+\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	unknown	unknown	gnl\|CDD\|234696
CP026585.2\|AVE13077.1\|4625393_4625597_-\|hypothetical-protein	unknown	unknown	unknown
CP026585.2\|AVE13072.1\|4621108_4622395_+\|peptidylprolyl-isomerase-SurA	unknown	unknown	gnl\|CDD\|236758
CP026585.2\|AVE13074.1\|4623386_4624208_+\|ribosomal-RNA-small-subunit-methyltransferase-A	unknown	unknown	gnl\|CDD\|234708

Protein	Function_ID	Function_description	E-value
CP026585.2\|AVE13070.1\|4617634_4618462_-\|co-chaperone-DjlA	gnl\|CDD\|236512	PRK09430, djlA, co-chaperone DjlA.	2.63694e-164
CP026585.2\|AVE13061.1\|4604171_4605674_+\|L-arabinose-isomerase	gnl\|CDD\|179503	PRK02929, PRK02929, L-arabinose isomerase; Provisional.	0
CP026585.2\|AVE13062.1\|4605811_4606507_+\|L-ribulose-5-phosphate-4-epimerase	gnl\|CDD\|236181	PRK08193, araD, L-ribulose-5-phosphate 4-epimerase AraD.	0
CP026585.2\|AVE13071.1\|4618705_4621054_+\|LPS-assembly-protein-LptD	gnl\|CDD\|235158	PRK03761, PRK03761, LPS assembly outer membrane complex protein LptD; Provisional.	0
CP026585.2\|AVE13075.1\|4624210_4624588_+\|Co2+/Mg2+-efflux-protein-ApaG	gnl\|CDD\|180098	PRK05461, apaG, CO2+/MG2+ efflux protein ApaG; Reviewed.	7.84855e-74
CP026585.2\|AVE13059.1\|4601268_4602114_-\|arabinose-operon-transcriptional-regulator-AraC	gnl\|CDD\|236717	PRK10572, PRK10572, arabinose operon transcriptional regulator AraC.	0
CP026585.2\|AVE13063.1\|4606682_4609040_+\|DNA-polymerase-II	gnl\|CDD\|235595	PRK05762, PRK05762, DNA polymerase II; Reviewed.	0
CP026585.2\|AVE13068.1\|4615288_4616914_+\|sensor-histidine-kinase	gnl\|CDD\|225827	COG3290, CitA, Signal transduction histidine kinase regulating citrate/malate metabolism [Signal transduction mechanisms].	6.55037e-173
CP026585.2\|AVE13067.1\|4613599_4614964_-\|malate-permease	gnl\|CDD\|377030	pfam03390, 2HCT, 2-hydroxycarboxylate transporter family. The 2-hydroxycarboxylate transporter family is a family of secondary transporters found exclusively in the bacterial kingdom. They function in the metabolism of the di- and tricarboxylates malate and citrate, mostly in fermentative pathways involving decarboxylation of malate or oxaloacetate.	4.87969e-169
CP026585.2\|AVE13064.1\|4609227_4612134_+\|RNA-polymerase-associated-protein-RapA	gnl\|CDD\|235319	PRK04914, PRK04914, RNA polymerase-associated protein RapA.	0
CP026585.2\|AVE13076.1\|4624592_4625441_+\|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)	gnl\|CDD\|273208	TIGR00668, Bis5'-nucleosyl-tetraphosphatase_symmetrical, bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Diadenosine 5',5"'-P1,P4-tetraphosphate (Ap4A) is a regulatory metabolite of stress conditions. It is hydrolyzed to two ADP by this enzyme. Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase. [Cellular processes, Adaptations to atypical conditions].	0
CP026585.2\|AVE13065.1\|4612146_4612806_+\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	gnl\|CDD\|236659	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA.	2.4454e-161
CP026585.2\|AVE13066.1\|4612880_4613420_-\|citrate-lyase-holo-[acyl-carrier-protein]-synthase	gnl\|CDD\|163145	TIGR03124, citrate_citX, holo-ACP synthase CitX. Members of this protein family are the CitX protein, or CitX domain of the CitXG bifunctional protein, of the citrate lyase system. CitX transfers the prosthetic group 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA to the citrate lyase gamma chain, an acyl carrier protein. This enzyme may be designated holo-ACP synthase, holo-citrate lyase synthase, or apo-citrate lyase phosphoribosyl-dephospho-CoA transferase. In a few genera, including Haemophilus, this protein occurs as a fusion protein with CitG (2.7.8.25), an enzyme involved in prosthetic group biosynthesis. This CitX family is easily separated from the holo-ACP synthases of other enzyme systems. [Energy metabolism, Fermentation, Protein fate, Protein modification and repair].	5.54697e-86
CP026585.2\|AVE13069.1\|4616903_4617602_+\|response-regulator	gnl\|CDD\|226931	COG4565, CitB, Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms].	5.03078e-66
CP026585.2\|AVE13060.1\|4602451_4604161_+\|ribulokinase	gnl\|CDD\|235221	PRK04123, PRK04123, ribulokinase; Provisional.	0
CP026585.2\|AVE13073.1\|4622400_4623390_+\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	gnl\|CDD\|234696	PRK00232, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed.	0
CP026585.2\|AVE13072.1\|4621108_4622395_+\|peptidylprolyl-isomerase-SurA	gnl\|CDD\|236758	PRK10770, PRK10770, peptidyl-prolyl cis-trans isomerase SurA; Provisional.	0
CP026585.2\|AVE13074.1\|4623386_4624208_+\|ribosomal-RNA-small-subunit-methyltransferase-A	gnl\|CDD\|234708	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA.	3.65731e-147

>CP026585.2|AVE13067.1|4613599_4614964_-|malate-permease
MSTTDNAFSATLEPIDTPKTTLKQRWWHIMDNWKVGIVPLPLFLLAGGLIALDCLGGKLPSDIVVMVATLAFFGFACGEFGKRLPVLGKLGAAAICATFIPSALVHYGLLPDVVIESTTKFYKSTNILYLYICCIIVGSIMSMNRTTLIQGFLKIFFPMLCGEVVGMLVGIGVGTLLGMEPFQVFFFIVLPIMAGGVGEGAIPLSMGYAALMHMEQGVALGRVLPMVMLGSLTAIVISGCLNQLGKRFPHLTGEGQLMPNRSHETRSLSESEGVSGKTDVGTLASGALLAVLLYMMGMLGHKLIGLPAPVGMLFLAVLLKLANVVSPRLQEGSQMVYKFFRTAVTYPILFAVGVAITPWQELVNAFTLTNLLVIVSTVSALVATGFLVGKKIGMHPIDVAIVSCCQSGQGGTGDVAILTAGNRMSLMPFAQIATRIGGAINVSLGLLFLSHYLA
>CP026585.2|AVE14024.1|4613382_4613571_+|hypothetical-protein
MLTPAWAGVSTDINSSPTYDKYDSAWTVMMMVAIADRALIVTLNAEHLGYRTQIFSAFCSGK
>CP026585.2|AVE13066.1|4612880_4613420_-|citrate-lyase-holo-[acyl-carrier-protein]-synthase
MSVDTPAQAGVSIDALLAAKEQRAARQADWLAHYQQPVISLTLVTPGAVKDSIRYRNMMGVALQACDQLLWKHRWQTLDRQVLWLPTGPEALWCVAHPASEIKAMCSTLEQSHPLGRLWDIDVICPQNGLVGRQSLGESQRRCLLCDEPAHACARSRRHDTDLVVARVEQMIDAWFARD
>CP026585.2|AVE13065.1|4612146_4612806_+|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA
MAMENYNPPQDPWLVILYQDEHIMVVNKPSGLLSVPGRLEEHKDSVMTRIQRDFPQAESVHRLDMATSGVIVVALNKAAERELKRQFREREPKKQYVARVWGHPQPAEGLVDLPLICDWPNRPKQKVCYETGKAAQTEYEVLEYAEDNTARVRLKPITGRSHQLRVHMLALGHPILGDRFYATPEALAMAPRLLLHAETLTITHPAYGNAMTFRAPIDF
>CP026585.2|AVE13064.1|4609227_4612134_+|RNA-polymerase-associated-protein-RapA
MPFTLGQRWISDTESELGLGTVVALDARMVTLLFPAIGENRLYSRNDSPITRVMFNPGDTITSHEGWQLHVDKVNEENGLLSYTGTRLDTQEANVTLREVLLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKFQSEQYRMPWSGLRGQRTSLIPHQLHIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIVVPETLQHQWLVEMLRRFNLRFSLFDDERYAEAQHDAYNPFETEQLVICSLDFVRRSKQRLEHLCDAEWDLMVVDEAHHLVWSEEAPSREYQAIEQLAERVPGILLLTATPEQLGMESHFARLRLLDPNRFHDFEQFVEEQQNYRPVADAVALLLAGNKLSDSELNTLGDLIGEQDIEPLLQAANSDREDAQAARQELISMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIRLPLPTQYQTAIKVSGIMGARKTAEERARDMLYPEQIYQEFEGDTGTWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASNLVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTVYDSVHDELINYLAAPESIDGFDDLIKSCRQQHDALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTSLIAFSMNLFDIVGINQDDRGENLIVLTPSDHMLVPDFPGLPEDGCTITFERDVALSREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLLELIYVVEAQAPKQLQLNRFLPATPVRMLLDKNGNNLAAQVEFESFNRQLSAVNRHTGSKLVNAVQQDVHAILQQGEAQIAKAAQGLIDAARNEADEKLTAELSRLEALKAVNPNIRDDELAGIESNRQQVMDALAQAGWRLDALRLIVVTHQ
>CP026585.2|AVE13063.1|4606682_4609040_+|DNA-polymerase-II
MTQPRAGFLLTRHWRDTPQGTELSFWLATDDGPLQVTLPPQESVAFIPEAQRAQAERLLQGEKGLRFAPLALKDFHRQPIVGLYCRAHRQLMRLEKMLRDSGVTVYEGDIRPPERYLMERFITAPVWVEGETRGSQLVNARMKPNPDYRPPLKWVSLDIETSRHGELYCIGLEGCGQRVVYMLGPEPETPPDVDFELVFIASRPLLLEKLNAWFAEHDPDVLIGWNVVQFDLRVLQKHAERYRIPLRLGRGNSELEWREHGFKNGVFFAQANGRLIIDGIDALKSAFWNFSSFSLEAVARELLGEGKAIDNPWDRMDEIDRRFHEDKPALAIYNLQDCELVTRIFHKTEIMPFLLERATVNGLPADRHGGSVAAFSHLYFPRMHRLGYVAPNLGDVPPQASPGGYVMDSRPGLYDSVLVLDYKSLYPSIIRTFLIDPVGLIEGLAQPDDQHSIEGFLGARFSRDKHCLPGIVSQIWHGRDEAKRQHNKPLSQALKIIMNAFYGVLGTSACRFFDPRLASSITMRGHAIMRQTKALIEAKGYDVIYGDTDSTFVWLKRPHSEAQAAEIGRELVSHVNAWWAQELSKSQLTSALELEYETHFCRFLMPTIRGADTGSKKRYAGMIQEGDAQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNQPYQDYVRETIARLMNGELDEQLVYRKRLRRPLAEYQRNVPPHVRAARLADEHNLKLGRAQQYQQRGTIKYVWTTSGPEPVDYQQSPLDYDHYLTKQLQPVAEGILPFVNDDFATIVTGQLGLF
>CP026585.2|AVE13062.1|4605811_4606507_+|L-ribulose-5-phosphate-4-epimerase
MLEDLKRQVLEANLALPKHNLVTLTWGNVSAVDREKGVFVIKPSGVDYRVMTADDMVVVSLESGEVVEGNKKPSSDTPTHRLLYQAFPTLGGIVHTHSRHATIWAQAGQSIPATGTTHADYFYGPVPCTRLMTDAEINGDYEWETGNVIVETFRQQGIDPAQMPGVLVHSHGPFAWGKNAEDAVHNAIVLEEIAYMGIFCRQLAPQLPAMQQTLLDKHYLRKHGAKAYYGQ
>CP026585.2|AVE13061.1|4604171_4605674_+|L-arabinose-isomerase
MTIFDNYEVWFVIGSQHLYGPEALRQVTKHAEHVVNSLNAEAKLPCKLVLKPLGTTPDEITHICRDANYDDKCAGLVVWLHTFSPAKMWINGLTILNKPLLQFHTQYNAALPWDSIDMDFMNLNQTAHGGREFGFIGARMRQQHSVVTGHWQDKEAHQRIGGWMRQAVSKQDTRHLKVCRFGDNMREVAVTDGDKVAAQIKFGFSVNTWAVGDLVQVVNSISDGDISALVDEYESSYRLTPAAQVHGEKRQNVLDAARIELGMKRFLEQGGFHAFTTTFEDLHGLKQLPGLAVQRLMQQGYGFAGEGDWKTAALLRIMKVMSTGLQGGTSFMEDYTYHFDNGNDLVLGSHMLEVCPTIATVEKPILDVQPLGIGGKADPARLIFNTQTGPAIVASLIDLGDRFRLLVNTIETVPTPHDLPKLPVANALWKAQPDLRTASEAWIIAGGAHHTVFSHALNLDDMRQFAELHDIELTVIDNDTRLPSFKDALRWNEVYYGSKR
>CP026585.2|AVE13060.1|4602451_4604161_+|ribulokinase
MAIAIGLDFGSDSVRALAVECASGAELATSVEWYPRWREGQYCDGANNRFRHHPRDYIESMEAALKSVLASLSAEQRADVVGIGVDSTGSTPAPVDAEGNVLALREEFADNPNAMFVLWKDHTAVEEAEAITRLCHQPGKEDYSRYIGGIYSSEWFWAKILHVTREDSAVAQAAASWVELCDWVPALLSGTTRPQDLRRGRCSAGHKSLWHESWGGLPPASFFDELDPIINQHLAWPLFTDTWTADVPVGTLSAEWAQRLGLSQSVAISGGAFDCHMGAVGAGAQPNALVKVIGTSTCDILIADKESVGERTVKGICGQVDGSVVPHFIGMEAGQSAFGDIYAWFGRILGWPLEQLAQQQPALREQIKASQKQLLPALTEAWANNPSLEHLPVVLDWFNGRRTPNANQRLKGVITDLNLATDAPALFGGLIAATAFGARAIMECFTEQGIPVNNVMALGGIARKNQVIMQACCDVLNRPLQIVASDQCCALGAAIFAAVAAGVYDDIPAAQQRMASQVETTLQPRPAQAQRFEQLYQRYQQWSVSAEQHYLPSAAKAEKAPQSKAALTH
>CP026585.2|AVE13059.1|4601268_4602114_-|arabinose-operon-transcriptional-regulator-AraC
MAETQNDPLLPGYSFNAHLVTGLTPIEAQGYLDFFIDRPLGMKGYILNLTIRGEGVINNHGEQFVCRPGDMLLFPPGEIHHYGRHPDASEWYHQWVYFRPRAYWHEWLNWPTIFAQTGFFRPDEQWQARFGELFGQIVDAGQGAGRYSELLAINLLEQLLLRRMEAINESLHPPLDNRVREACQYISDHLADSHFDIASVAQHVCLSPSRLSHLFRQQLGVSVLGWREDQRISQAKLLLSTTRMPIATVGRNVGFEDQLYFSRVFKKCTGASPSEFRAGCE
>CP026585.2|AVE13068.1|4615288_4616914_+|sensor-histidine-kinase
MKLSFQYKLFISLVAFFSVLFIALGIYYYFDASRQLYQEMSARAKIQAEEIALMPNLRQQVSRHDPQAIQAFMQQIAAHSDASFIVIGDRQGVHLFHSVHPEWVGTRLVGGDNQAVLEGKSITTIRKGGLGVSLRSKTPIVDDAGRVIGIVSVGYLTSYLDSITLTKVINIFIAAVLLLIALFIFSWYFTRSIKKQIFSLEPREIGLLVRQQKAMMESIFEGVIVIDRQRRIEVINHAARSLLGLSQPARQLRGQSIDSVISPQPFFASGDMLERDTHDELCRFNQLTVLASRVRIMLENTLQGWVITFRDRNEINALTAQLSQVKRYVDNLRIMRHEQLNRMTTLSGLLHMGHYDEAIRYIQAQSEHAQELLDFISSHFHSPTLCGLLLGKATRAREKGVALSFDPACRIDRPLPSLMESELISIIGNLLDNAIEATQRAELPHEPVEVLIQLNARELIIEVADRGVGIRPDIRERIFERGVTTKTRGDHGIGLYLIEHYVTQAGGTIEVADNAPRGTIFTLFIPADAHACPQPEAHDAS
>CP026585.2|AVE13069.1|4616903_4617602_+|response-regulator
MHHDLVDVLIIEDESELARLHAELVQKHPRLRLAGMAASLAQARQLLHATPPQLVLLDNYLPDGKGVTLMTDPALATSQCSVIFITAASDMETCSQAIRNGAFDYILKPVSWKRLSQSLERFIQFYDQQREWKIVDQQNVDSLYQLQAKNYRVDSGSKGIEEKTLALVQGLFSDREAHCFSVDEVVSAAGLSKTTARRYLEHGVETGFLEVEMLYGKIGHPRRLYRRAKVKS
>CP026585.2|AVE13070.1|4617634_4618462_-|co-chaperone-DjlA
MQYLGKVIGVAVALLMGGGFWGVVLGFLVGHMFDRARSRRLNLFANQQERQSLFFSTTFEVMGHLTKSKGRVTEADIHVANVLMDRMNLHGASRTAAQQAFRDGKADNYPLREKMRQLRSVCFGRFDLIRMFLEIQLQAAFADGELHPNEREVLFVIADELGISRAQFDQFLRMMQGGAQFGGGSQQRSYGQHGGNAGWQQAQRGPTLEDACNVLGVKPTDDAATVKRAYRKLMNEHHPDKLVAKGLPPEMMEMAKQKAQEIQKAWELIKEQRGF
>CP026585.2|AVE13071.1|4618705_4621054_+|LPS-assembly-protein-LptD
MKKRIPSLLATMIASALYSQQGLAADLATQCMLGVPSYDRPLVEGRPGDLPVTINADHAKGNYPDNAVFTGNVDINQGNSRLRADEVQLHQQQAAGQAQPVRTVDALGNVHYDDNQVILKGPKAWSNLNTKDTNVWQGDYQMVGRQGRGTADLMKQRGENRYTILENGSFTSCLPGSDTWSVVGSEVIHDREEQVAEIWNARFKLGSVPIFYSPYLQLPVGDKRRSGFLIPNAKYSTKNGVEFSLPYYWNIAPNFDATITPHYMNKRGGVMWENEFRYLTQLGSGLTEFDYLPSDKVYEDDHSSDSNSRRWLFYWNHSGVIDQVWRLNADYTKVSDPDYFNDFSSKYGSSTDGYATQKFSAGYVNQNFDATVSTKQFQVFDRESSNSYSAEPQLDVNYYQNDVGPFDTHLYGQVAHFVNSNNNMPEATRVHFEPTINLPLSNGWGSLNTEAKLLATHYQQSNLDKYNAANGTDYKESVSRVMPQFKVDGKMVFERDLQEGFTQTLEPRVQYLYVPYRDQSEIGNYDSTLLQSDYTGLFRDRTYSGLDRIASANQVTTGLTSRVYDAAAVERFNISVGQIYYFTESRTGDDNINWENNDTTGSLVWAGDTYWRIADEWGLRGGIQYDTRLDNVATGNGTIEYRRDENRLVQLNYRYASPEYIQATLPSYSTAAQYKQGISQVGMTASWPIVDRWSVVGAYYYDTNTRKAANQMLGVQYNSCCYAIRLGYERKVNGWNSNDNGGESKYDNTFGINIELRGLSSNYGLGTQQMLRSNILPYQSSL
>CP026585.2|AVE13072.1|4621108_4622395_+|peptidylprolyl-isomerase-SurA
MKNWKTLLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAGQAGQQLPDDATLRHQILERLIMDQIVLQMGQKMGVKISDDQLDQAIANIAKQNNMTLDQMRSRLAYEGINYNTYRNQIRKEMLISEVRNNEVRRRITVLPQEVEALAKQIGDQNDASTELNLSHILIPLPENPTSDEVAAAQEQANSIVEQARNGANFGKLAITYSADQQALKGGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFHILKVNDLRGGTQNISVTEVHARHILLKPSPIMNDAQAQAKLEQIAAEIKSGKITFAQAAKTYSEDPGSANQGGDLGWATPDIFDPAFRDALMRLNKGQTSGPVHSSFGWHLIELLDSRQVDRTDAAQKDRAYRMLMNRKFSEEAATWMQEQRASAYVKILSN
>CP026585.2|AVE13073.1|4622400_4623390_+|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA
MPETRKVVITPGEPAGIGPDLVVQLAQRDWPVELVICADGALLTDRAKRLGLPLSLLPYDPAQPPVPQRAGTLTLLNVPLNVPAEPGVLNVQNGAYVVETLARACDGCLSGEFAALVTGPVHKGNINDAGIAFTGHTEFFEERAKASKVVMMLATEELRVALVTTHLPLKAISEAITPELLREIITILDHDLRTKFGIAQPHVLVCGLNPHAGEGGHMGTEEIDTIIPVLEEMRAKGMNLSGPLPADTLFQPKYLDHADAVLAMYHDQGLPVLKYQGFGRGVNITLGLPFIRTSVDHGTALELAGQGKADVGSFITALNLAIKMIVNTQ
>CP026585.2|AVE13074.1|4623386_4624208_+|ribosomal-RNA-small-subunit-methyltransferase-A
MNNRVHQGHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALTEPVGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTMNFGELAEKMGQPLRVFGNLPYNISTPLMFHLFSYTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYCQVIPVLEVPPSAFTPPPKVDSAVVRLVPHSTMPYPVKEIRVLSRITTEAFNQRRKTIRNSLGNLFSVEVLTELGIDPAMRAENISVAQYCLMANWLSDNLPTKES
>CP026585.2|AVE13075.1|4624210_4624588_+|Co2+/Mg2+-efflux-protein-ApaG
MIHSPRVCVQVQSVYIESQSSPEEERYVFAYTVTIRNLGRSQVQLLGRYWLITNGHGRETEVQGEGVVGEQPHIPAGGEYQYTSGAVIETPLGTMQGHYEMIDIDGAPFRIEIPVFRLAVPTLIH
>CP026585.2|AVE13076.1|4624592_4625441_+|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)
MSTYLIGDVHGCYDELIALLAQVEFDPRRDTLWLTGDLVARGPGSLEVLRYVKSLGDSVRLVLGNHDLHLLAVFAGISRNKPKDRLKPLLEAPDADELLNWLRRQPLLQVDEEKKLVMAHAGITPQWDLETAQQCARDVEAVLSSDSYPFFLDAMYGDMPNHWSNELSGLARLRFISNAFTRMRYCFPNGQLDMYSKEAPEDAPAPLKPWFAIPGPVSNAYSIAFGHWASLEGRGTPEGIYALDTGCCWGGELTCLRWEDKQYFTQPSNRQKSLDEGEAVAS
>CP026585.2|AVE13077.1|4625393_4625597_-|hypothetical-protein
MFPVAGFVFFLKRSPGRQIAHKRRSGKALAATRQNDAAGSPDKAQRAAIREESGRDGFAFVEAFLPV

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Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

448578 : 517956

uncultured_Caudovirales_phage(61.11%)

integrase,tail,head,portal,protease,tRNA,terminase,capsid

attL 466186:466203|attR 482181:482198

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVE09206.1\|448578_449526_-\|tRNA	methionyl-tRNA formyltransferase	E3SNR5	Prochlorococcus_phage	2.2e-07	37.2
AVE09207.1\|449540_450050_-	peptide deformylase	E3SLL2	Synechococcus_phage	2.6e-18	40.3
AVE09208.1\|450178_451303_+	DNA-protecting protein DprA	NA	NA	NA	NA
AVE09209.1\|451274_451748_+	DUF494 domain-containing protein	NA	NA	NA	NA
AVE09210.1\|451773_452316_+	hypothetical protein	NA	NA	NA	NA
AVE09211.1\|452320_452893_+	L-threonylcarbamoyladenylate synthase type 1 TsaC	NA	NA	NA	NA
AVE09212.1\|452896_453715_+	shikimate dehydrogenase	NA	NA	NA	NA
AVE09213.1\|453711_453969_+	DUF1488 domain-containing protein	NA	NA	NA	NA
AVE13844.1\|453944_454499_-	gamma carbonic anhydrase family protein	NA	NA	NA	NA
AVE09214.1\|460294_460516_-	hypothetical protein	NA	NA	NA	NA
AVE09215.1\|460809_463920_-	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA
AVE09216.1\|463932_465072_-	MexX family efflux pump subunit	NA	NA	NA	NA
AVE09217.1\|465450_466101_+	acrEF/envCD operon transcriptional regulator	NA	NA	NA	NA
466186:466203	attL	NA	NA	NA	NA
AVE09218.1\|466376_467603_+\|integrase	site-specific integrase	A0A2H4JB45	uncultured_Caudovirales_phage	1.8e-150	62.2
AVE09219.1\|467695_468637_+	hypothetical protein	NA	NA	NA	NA
AVE09220.1\|468818_469103_+	transcriptional regulator	NA	NA	NA	NA
AVE09221.1\|469113_469893_+	hypothetical protein	Q8HA02	Enterobacteria_phage	6.2e-40	51.5
AVE09222.1\|470016_470211_-	toxin-antitoxin system HicB family antitoxin	NA	NA	NA	NA
AVE13845.1\|470434_470614_+	host cell division inhibitor Icd-like protein	A0A2H4JGW3	uncultured_Caudovirales_phage	2.6e-26	94.9
AVE09223.1\|470606_470795_+	hypothetical protein	NA	NA	NA	NA
AVE09224.1\|470787_471102_+	hypothetical protein	NA	NA	NA	NA
AVE09225.1\|471098_471467_+	hypothetical protein	A0A2H4JCX7	uncultured_Caudovirales_phage	3.7e-51	81.1
AVE09226.1\|471463_471829_+	hypothetical protein	NA	NA	NA	NA
AVE09227.1\|471828_473964_+	DNA primase	A0A1W6JPG0	Morganella_phage	3.4e-205	62.4
AVE09228.1\|474306_474642_+	hypothetical protein	NA	NA	NA	NA
AVE09229.1\|474690_475203_-	hypothetical protein	NA	NA	NA	NA
AVE09230.1\|475466_476633_+\|capsid	phage major capsid protein	A0A2H4JED2	uncultured_Caudovirales_phage	9.8e-207	95.9
AVE09231.1\|476684_477245_+\|head,protease	HK97 family phage prohead protease	A0A2H4JB68	uncultured_Caudovirales_phage	1.2e-98	95.7
AVE09232.1\|477246_478488_+\|portal	phage portal protein	A0A2H4JFJ9	uncultured_Caudovirales_phage	1.0e-230	96.5
AVE09233.1\|478484_478820_+\|head,tail	head-tail adaptor	A0A2H4JHK5	uncultured_Caudovirales_phage	3.7e-26	57.8
AVE09234.1\|478816_479116_+\|head,tail	phage gp6-like head-tail connector protein	A0A2H4JD08	uncultured_Caudovirales_phage	3.4e-39	80.8
AVE09235.1\|479115_479559_+	HNH endonuclease	A0A2H4JAS8	uncultured_Caudovirales_phage	2.8e-77	91.8
AVE09236.1\|479685_479877_+\|terminase	terminase	NA	NA	NA	NA
AVE09237.1\|479834_480191_+\|terminase	phage terminase small subunit P27 family	A0A2H4JHS3	uncultured_Caudovirales_phage	5.5e-60	99.2
AVE09238.1\|480174_481836_+\|terminase	terminase large subunit	A0A2H4JB64	uncultured_Caudovirales_phage	0.0e+00	98.0
AVE09239.1\|481838_482030_+	hypothetical protein	NA	NA	NA	NA
AVE09240.1\|482183_482480_-	Fis family transcriptional regulator	NA	NA	NA	NA
482181:482198	attR	NA	NA	NA	NA
AVE09241.1\|482504_483470_-\|tRNA	tRNA dihydrouridine synthase DusB	NA	NA	NA	NA
AVE09242.1\|483627_483822_-	hypothetical protein	NA	NA	NA	NA
AVE09243.1\|483827_484709_-	50S ribosomal protein L11 methyltransferase	NA	NA	NA	NA
AVE09244.1\|484720_486172_-	sodium/panthothenate symporter	NA	NA	NA	NA
AVE09245.1\|486161_486404_-	hypothetical protein	NA	NA	NA	NA
AVE09246.1\|486514_487864_-	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA
AVE09247.1\|487874_488342_-	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA
AVE09248.1\|488364_488817_-	type II 3-dehydroquinate dehydratase	NA	NA	NA	NA
AVE09249.1\|489040_489649_-	protein-methionine-sulfoxide reductase heme-binding subunit MsrQ	NA	NA	NA	NA
AVE09250.1\|489648_490650_-	protein-methionine-sulfoxide reductase catalytic subunit MsrP	NA	NA	NA	NA
AVE09251.1\|490878_491070_+	hypothetical protein	NA	NA	NA	NA
AVE09252.1\|491149_493090_+	RNase E specificity factor CsrD	NA	NA	NA	NA
AVE09253.1\|493211_493418_-	hypothetical protein	NA	NA	NA	NA
AVE09254.1\|493395_494439_+	rod shape-determining protein	F2Y0P3	Organic_Lake_phycodnavirus	6.7e-05	22.3
AVE09255.1\|494509_495502_+	rod shape-determining protein MreC	NA	NA	NA	NA
AVE09256.1\|495501_495990_+	rod shape-determining protein MreD	NA	NA	NA	NA
AVE09257.1\|495997_496579_+	septum formation inhibitor Maf	NA	NA	NA	NA
AVE09258.1\|496581_498051_+	ribonuclease G	NA	NA	NA	NA
AVE09259.1\|498088_501886_+	AsmA2 domain-containing protein	NA	NA	NA	NA
AVE09260.1\|501974_503420_+\|protease	metalloprotease TldD	NA	NA	NA	NA
AVE09261.1\|503455_504385_-	HTH-type transcriptional activator AaeR	NA	NA	NA	NA
AVE09262.1\|504516_504720_+	protein AaeX	NA	NA	NA	NA
AVE09263.1\|504727_505660_+	p-hydroxybenzoic acid efflux pump subunit AaeA	NA	NA	NA	NA
AVE09264.1\|505665_507633_+	p-hydroxybenzoic acid efflux pump subunit AaeB	NA	NA	NA	NA
AVE09265.1\|507712_507988_+	hypothetical protein	NA	NA	NA	NA
AVE09266.1\|508038_508305_-	DUF1471 domain-containing protein	NA	NA	NA	NA
AVE09267.1\|508403_508667_-	DUF1471 domain-containing protein	NA	NA	NA	NA
AVE09268.1\|509042_509513_-	arginine repressor	NA	NA	NA	NA
AVE09269.1\|509927_510866_+	malate dehydrogenase	NA	NA	NA	NA
AVE09270.1\|511002_512061_-\|protease	serine endoprotease DegS	NA	NA	NA	NA
AVE09271.1\|512148_513516_-\|protease	serine endoprotease DegQ	A0A1B1IT49	uncultured_Mediterranean_phage	6.0e-22	25.3
AVE09272.1\|513689_514088_-	hypothetical protein	NA	NA	NA	NA
AVE09273.1\|514278_515406_+	cell division protein ZapE	NA	NA	NA	NA
AVE09274.1\|515671_516100_+	50S ribosomal protein L13	NA	NA	NA	NA
AVE09275.1\|516115_516508_+	30S ribosomal protein S9	NA	NA	NA	NA
AVE09276.1\|516617_516821_-	hypothetical protein	NA	NA	NA	NA
AVE09277.1\|516819_517458_+	stringent starvation protein A	NA	NA	NA	NA
AVE09278.1\|517461_517956_+\|protease	ClpXP protease specificity-enhancing factor	A0A1S5R3H3	Pseudomonas_phage	1.5e-26	54.8

DBSCAN-SWA_2

1241256 : 1290400

Salmonella_phage(80.0%)

transposase,integrase,tail,plate,head,portal,tRNA,coat,capsid

attL 1240671:1240717|attR 1279026:1279072

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1240671:1240717	attL	NA	NA	NA	NA
AVE09977.1\|1241256_1242237_-\|transposase	IS5-like element ISKpn26 family transposase	Q38213	Escherichia_phage	8.9e-185	99.1
AVE09978.1\|1242282_1243281_-\|integrase	site-specific integrase	A0A1S6L016	Salmonella_phage	2.2e-183	94.5
AVE09979.1\|1243283_1243913_-	phage repressor protein	A0A1S6KZZ7	Salmonella_phage	1.4e-61	54.5
AVE09980.1\|1244035_1244278_+	Rha family transcriptional regulator	A0A1S6KZZ6	Salmonella_phage	4.0e-38	98.8
AVE09981.1\|1244310_1244820_+	hypothetical protein	A0A1S6L008	Salmonella_phage	1.1e-77	85.8
AVE09982.1\|1244827_1245028_+	DUF2724 domain-containing protein	A0A1S6L005	Salmonella_phage	4.5e-19	68.8
AVE09983.1\|1244991_1245330_+	hypothetical protein	A0A218M4I7	Erwinia_phage	6.2e-29	58.0
AVE09984.1\|1245397_1245631_+	DUF2732 domain-containing protein	A0A1S6L021	Salmonella_phage	6.0e-31	90.9
AVE09985.1\|1245630_1245858_+	hypothetical protein	A0A1S6L007	Salmonella_phage	5.1e-35	92.0
AVE09986.1\|1245854_1246706_+	DNA adenine methylase	A0A1S6L011	Salmonella_phage	2.2e-115	75.4
AVE09987.1\|1246702_1249087_+	replication endonuclease	A0A1S6L028	Salmonella_phage	0.0e+00	87.9
AVE09988.1\|1249316_1249568_+	hypothetical protein	NA	NA	NA	NA
AVE09989.1\|1249567_1251052_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5
AVE09990.1\|1251159_1251348_+	hypothetical protein	A0A1S6L006	Salmonella_phage	2.2e-23	90.3
AVE09991.1\|1251359_1251593_+	DinI family protein	A0A0M4S6H1	Salmonella_phage	2.0e-34	96.1
AVE09992.1\|1251688_1252372_-	hypothetical protein	NA	NA	NA	NA
AVE09993.1\|1252358_1253438_-	hypothetical protein	NA	NA	NA	NA
AVE09994.1\|1253437_1254439_-	hypothetical protein	NA	NA	NA	NA
AVE13869.1\|1254960_1255230_+	hypothetical protein	D2IZW1	Enterococcus_phage	1.4e-15	41.3
AVE09995.1\|1255286_1256330_-\|portal	phage portal protein	A0A1S6KZW5	Salmonella_phage	3.1e-172	85.6
AVE09996.1\|1256329_1258093_-	oxidoreductase	A0A1S6KZW3	Salmonella_phage	0.0e+00	91.8
AVE09997.1\|1258233_1259067_+\|capsid	GPO family capsid scaffolding protein	A0A1S6KZW9	Salmonella_phage	4.4e-100	77.6
AVE09998.1\|1259083_1260136_+\|capsid	phage major capsid protein, P2 family	A0A1S6KZZ3	Salmonella_phage	6.8e-175	91.0
AVE09999.1\|1260139_1260793_+	hypothetical protein	A0A1S6KZX1	Salmonella_phage	1.9e-90	80.0
AVE10000.1\|1260888_1261353_+\|head	head completion/stabilization protein	A0A1S6KZW8	Salmonella_phage	1.5e-73	85.7
AVE10001.1\|1261352_1261556_+\|tail	phage tail protein	E5G6M9	Salmonella_phage	9.8e-30	89.6
AVE13870.1\|1261559_1261775_+	hypothetical protein	E5G6N0	Salmonella_phage	6.1e-30	88.7
AVE10002.1\|1261755_1262265_+	lysozyme	E5G6N1	Salmonella_phage	1.6e-81	85.2
AVE10003.1\|1262269_1262653_+	hypothetical protein	A0A1S6KZZ2	Salmonella_phage	1.9e-18	45.4
AVE10004.1\|1262649_1263078_+	hypothetical protein	A0A1S6KZX8	Salmonella_phage	7.1e-54	82.5
AVE10005.1\|1263007_1263211_+	hypothetical protein	A0A1S6KZX6	Salmonella_phage	3.0e-23	77.6
AVE10006.1\|1263173_1263596_+\|tail	phage tail protein	A0A1S6KZY0	Salmonella_phage	8.2e-63	83.2
AVE10007.1\|1263588_1264035_+	phage virion morphogenesis protein	A0A1S6L001	Salmonella_phage	2.5e-54	72.3
AVE10008.1\|1264057_1264924_-	hypothetical protein	NA	NA	NA	NA
AVE10009.1\|1265018_1265591_+\|plate	phage baseplate assembly protein V	E5G6N6	Salmonella_phage	1.4e-76	70.8
AVE10010.1\|1265587_1265950_+\|plate	baseplate assembly protein	A0A1S6KZZ4	Salmonella_phage	8.4e-48	85.6
AVE10011.1\|1265936_1266845_+\|plate	baseplate assembly protein	E5G6N8	Salmonella_phage	1.9e-109	68.9
AVE13871.1\|1266837_1267509_+\|tail	phage tail protein I	A0A1S6L000	Salmonella_phage	3.2e-61	58.9
AVE10012.1\|1267510_1269460_+\|coat	spore coat protein CotH	Q6QI97	Burkholderia_phage	1.0e-06	38.9
AVE10013.1\|1269469_1270588_+	hypothetical protein	A0A248XD67	Klebsiella_phage	4.4e-55	38.0
AVE10014.1\|1270639_1271713_+\|tail	phage tail protein	A0A1S6KZZ8	Salmonella_phage	6.6e-40	53.6
AVE10015.1\|1271861_1273034_+\|tail	phage tail protein	A0A1S6KZY7	Salmonella_phage	3.4e-207	91.5
AVE10016.1\|1273043_1273559_+\|tail	phage major tail tube protein	E5G6P8	Salmonella_phage	1.4e-80	84.2
AVE10017.1\|1273611_1273911_+\|tail	phage tail assembly protein	E5G6P9	Salmonella_phage	8.2e-33	78.0
AVE10018.1\|1273925_1274045_+\|tail	GpE family phage tail protein	E5G6Q0	Salmonella_phage	2.2e-13	87.2
AVE10019.1\|1274037_1276668_+\|tail	phage tail tape measure protein	E5FFG5	Burkholderia_phage	8.9e-115	41.9
AVE10020.1\|1276664_1277150_+\|tail	phage tail protein	E5G6Q2	Salmonella_phage	5.2e-61	80.1
AVE10021.1\|1277146_1278241_+	late control protein D	E5G6Q3	Salmonella_phage	2.4e-170	83.6
AVE10022.1\|1278307_1278526_+	levansucrase regulator	Q53ZE7	Salmonella_virus	1.9e-26	72.2
AVE10023.1\|1278553_1278931_-	hypothetical protein	NA	NA	NA	NA
AVE10024.1\|1279534_1280017_-	SsrA-binding protein	W5RAM5	Staphylococcus_phage	2.3e-29	47.4
1279026:1279072	attR	NA	NA	NA	NA
AVE10025.1\|1280127_1280604_+	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA
AVE10026.1\|1280593_1280884_+	RnfH family protein	NA	NA	NA	NA
AVE10027.1\|1280950_1281292_-	outer membrane protein assembly factor BamE	NA	NA	NA	NA
AVE10028.1\|1281439_1283101_-	DNA repair protein RecN	NA	NA	NA	NA
AVE10029.1\|1283187_1284066_-	NAD(+) kinase	NA	NA	NA	NA
AVE10030.1\|1284190_1284781_+	nucleotide exchange factor GrpE	NA	NA	NA	NA
AVE10031.1\|1284900_1286187_-	DUF21 domain-containing protein	NA	NA	NA	NA
AVE10032.1\|1286206_1286998_-	inner membrane protein YpjD	NA	NA	NA	NA
AVE10033.1\|1287161_1288526_+	signal recognition particle protein	NA	NA	NA	NA
AVE10034.1\|1288785_1289034_+	30S ribosomal protein S16	NA	NA	NA	NA
AVE10035.1\|1289052_1289601_+	ribosome maturation factor RimM	NA	NA	NA	NA
AVE10036.1\|1289632_1290400_+\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA

DBSCAN-SWA_3

1395116 : 1447859

Salmonella_phage(40.38%)

transposase,tail,terminase,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVE10125.1\|1395116_1396583_+	IMP dehydrogenase	A0A1V0SHK8	Klosneuvirus	1.2e-87	38.7
AVE10126.1\|1396650_1398228_+	GMP synthase (glutamine-hydrolyzing)	NA	NA	NA	NA
AVE10127.1\|1398419_1399670_+	DUF4102 domain-containing protein	A0A1X9TCT6	Enterobacter_phage	5.8e-205	84.4
AVE10128.1\|1399612_1399855_-	hypothetical protein	NA	NA	NA	NA
AVE10129.1\|1399851_1400445_-	adenine methylase	T1SA14	Salmonella_phage	6.3e-109	91.9
AVE10130.1\|1400441_1401104_-	hypothetical protein	A0A059VF56	Pseudomonas_phage	1.2e-47	46.6
AVE10131.1\|1401100_1401259_-	DUF1317 domain-containing protein	T1SAR0	Salmonella_phage	1.1e-17	78.8
AVE10132.1\|1401251_1401545_-	PerC family transcriptional regulator	T1S9J5	Salmonella_phage	4.0e-32	71.1
AVE10133.1\|1401654_1401903_-	AlpA family phage regulatory protein	A0A0F6TJ45	Escherichia_coli_O157_typing_phage	4.9e-31	76.8
AVE10134.1\|1401951_1402833_-	recombinase RecT	T1SBJ5	Salmonella_phage	8.9e-136	84.3
AVE10135.1\|1402829_1403651_-	exodeoxyribonuclease VIII	A0A193GYK2	Enterobacter_phage	1.8e-130	80.2
AVE10136.1\|1403647_1403947_-	hypothetical protein	A0A0F6R7M4	Escherichia_coli_O157_typing_phage	2.1e-20	54.5
AVE10137.1\|1404313_1404895_-	XRE family transcriptional regulator	Q858D7	Salmonella_phage	7.1e-65	64.3
AVE10138.1\|1405049_1405283_+	hypothetical protein	T1SAR5	Salmonella_phage	9.2e-24	66.2
AVE10139.1\|1405429_1405639_+	hypothetical protein	A0A193GYW4	Enterobacter_phage	1.8e-26	78.3
AVE10140.1\|1405638_1406406_+	primosomal protein	A0A193GZ86	Enterobacter_phage	8.9e-140	91.4
AVE10141.1\|1406402_1407188_+	replication protein	A0A193GYX1	Enterobacter_phage	3.7e-133	87.7
AVE10142.1\|1407307_1407655_+	DUF1064 domain-containing protein	A0A0F6R8N5	Escherichia_coli_O157_typing_phage	6.5e-50	82.6
AVE10143.1\|1407847_1408258_+	hypothetical protein	A0A2P1MXC5	Escherichia_phage	4.3e-16	45.1
AVE10144.1\|1408241_1408433_+	hypothetical protein	NA	NA	NA	NA
AVE10145.1\|1408429_1409074_+	hypothetical protein	Q1MVG0	Enterobacteria_phage	8.0e-110	79.3
AVE13874.1\|1409367_1409835_+	hypothetical protein	A0A2R2Z312	Escherichia_phage	1.3e-37	51.7
AVE10146.1\|1409834_1410128_+	hypothetical protein	Q6UAT9	Klebsiella_phage	2.7e-44	86.6
AVE10147.1\|1410124_1410745_+	hypothetical protein	Q1MVF7	Enterobacteria_phage	1.0e-29	40.7
AVE13876.1\|1410744_1410948_+	hypothetical protein	NA	NA	NA	NA
AVE10148.1\|1410940_1411279_+	hypothetical protein	A0A193GYX4	Enterobacter_phage	1.8e-44	80.0
AVE10149.1\|1411375_1412860_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5
AVE10150.1\|1412859_1413111_-	hypothetical protein	NA	NA	NA	NA
AVE13875.1\|1413263_1413521_+	lF-82	NA	NA	NA	NA
AVE10151.1\|1413598_1414183_+\|terminase	terminase small subunit	T1SBI8	Salmonella_phage	2.2e-90	88.6
AVE10152.1\|1414179_1415655_+\|terminase	terminase	Q858H3	Salmonella_phage	6.4e-280	93.1
AVE10153.1\|1415698_1416070_-	hypothetical protein	A0A0F6TJP2	Escherichia_coli_O157_typing_phage	3.7e-59	91.9
AVE10154.1\|1416119_1416362_+	hypothetical protein	NA	NA	NA	NA
AVE10155.1\|1416823_1417030_+	hypothetical protein	T1SA67	Salmonella_phage	4.8e-08	88.2
AVE10156.1\|1417044_1418727_+\|tail	phage tail protein	A0A0F6TJD8	Escherichia_coli_O157_typing_phage	1.5e-264	84.4
AVE10157.1\|1418723_1419020_+	hypothetical protein	T1SBI9	Salmonella_phage	1.2e-33	70.4
AVE10158.1\|1419022_1419703_+	peptidase	G9L6C4	Escherichia_phage	6.1e-76	84.0
AVE10159.1\|1419717_1420704_+	hypothetical protein	A0A193GZ49	Enterobacter_phage	2.5e-179	94.2
AVE10160.1\|1420757_1421195_+	hypothetical protein	A0A193GYT9	Enterobacter_phage	1.3e-66	91.7
AVE10161.1\|1421205_1421547_+	hypothetical protein	G9L6C7	Escherichia_phage	2.4e-36	70.8
AVE10162.1\|1421597_1421921_+	hypothetical protein	G9L6C8	Escherichia_phage	5.3e-46	85.0
AVE10163.1\|1421920_1422526_+	hypothetical protein	A0A0F6TJN5	Escherichia_coli_O157_typing_phage	4.0e-87	77.0
AVE10164.1\|1422525_1425003_+	hypothetical protein	Q858G3	Salmonella_phage	0.0e+00	84.4
AVE10165.1\|1425002_1425467_+	hypothetical protein	Q858G2	Salmonella_phage	1.5e-70	81.2
AVE10166.1\|1425466_1426006_+	hypothetical protein	A0A0F6TJ56	Escherichia_coli_O157_typing_phage	8.0e-71	80.0
AVE10167.1\|1426016_1428551_+	hypothetical protein	Q858G0	Salmonella_phage	0.0e+00	84.1
AVE10168.1\|1428550_1430461_+	hypothetical protein	Q858F9	Salmonella_phage	5.4e-287	82.7
AVE10169.1\|1430460_1433217_+	hypothetical protein	Q858F8	Salmonella_phage	0.0e+00	95.4
AVE10170.1\|1433213_1433408_+	hypothetical protein	Q858F7	Salmonella_phage	6.5e-15	67.2
AVE10171.1\|1433442_1433595_-	transmembrane anchored protein	G9L6D9	Escherichia_phage	2.5e-14	83.7
AVE10172.1\|1433693_1433990_-	hypothetical protein	T1SA06	Salmonella_phage	6.9e-24	63.9
AVE10173.1\|1436817_1437081_+	hypothetical protein	NA	NA	NA	NA
AVE10174.1\|1437121_1438255_-	hypothetical protein	NA	NA	NA	NA
AVE13877.1\|1438243_1438330_+	ABC transporter	NA	NA	NA	NA
AVE10175.1\|1438368_1439349_-\|transposase	IS5 family transposase ISKpn26	A0A077SK28	Escherichia_phage	1.0e-185	99.4
AVE10176.1\|1440217_1441480_-\|transposase	IS1380 family transposase ISEc9	A0A1B0VDR3	Salmonella_phage	1.3e-39	100.0
AVE10177.1\|1442370_1442511_-	ABC transporter	NA	NA	NA	NA
AVE10178.1\|1442588_1443905_+	right-handed parallel beta-helix repeat-containing protein	A0A0K2FI18	Enterobacter_phage	2.3e-34	32.3
AVE10179.1\|1443991_1444396_+	hypothetical protein	T1SA79	Salmonella_phage	8.7e-54	81.1
AVE10180.1\|1444382_1444688_+\|holin	phage holin family protein	A0A193GYK3	Enterobacter_phage	2.7e-39	81.4
AVE10181.1\|1444677_1445307_+	endolysin	Q858F0	Salmonella_phage	1.8e-90	76.9
AVE10182.1\|1445303_1445804_+	DUF2514 domain-containing protein	Q858E9	Salmonella_phage	1.3e-59	76.9
AVE10183.1\|1445990_1447859_-	phosphatase	A0A2P0VMN7	Tetraselmis_virus	2.6e-07	22.6

DBSCAN-SWA_4

1780210 : 1787115

Planktothrix_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVE13892.1\|1780210_1781074_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	7.4e-10	27.5
AVE10470.1\|1781084_1781858_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.9e-26	36.7
AVE13893.1\|1782098_1782992_-	lipid kinase YegS	A0A1V0SBJ0	Catovirus	6.1e-15	29.8
AVE10471.1\|1783237_1784599_-	U32 family peptidase	Q6DW11	Phage_TP	1.8e-207	94.8
AVE10472.1\|1784917_1785640_-	two-component system response regulator BaeR	W8CYM9	Bacillus_phage	8.3e-31	33.2
AVE10473.1\|1785636_1787115_-	two-component system sensor histidine kinase BaeS	W8CYF6	Bacillus_phage	1.9e-29	28.3

DBSCAN-SWA_5

1830460 : 1842135

Escherichia_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVE10502.1\|1830460_1831867_+	phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating)	M4QQM4	Ostreococcus_lucimarinus_virus	4.7e-38	28.7
AVE10503.1\|1832093_1833509_+	mannose-1-phosphate guanylyltransferase	A0A1V0SH58	Hokovirus	1.4e-53	31.0
AVE10504.1\|1833530_1834901_+	phosphomannomutase	A0A127AWJ1	Bacillus_phage	6.4e-32	25.9
AVE13896.1\|1835055_1836120_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	9.8e-105	54.7
AVE10505.1\|1836133_1837003_+	glucose-1-phosphate thymidylyltransferase	I7I009	Enterobacteria_phage	1.7e-110	66.7
AVE10506.1\|1837034_1837925_+	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	2.8e-28	34.2
AVE10507.1\|1837939_1838494_+	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A291LA62	Escherichia_phage	2.9e-52	58.2
AVE10508.1\|1838673_1839840_+	UDP-glucose 6-dehydrogenase	M1I798	Paramecium_bursaria_Chlorella_virus	9.1e-112	54.7
AVE10509.1\|1840202_1841114_+	acyltransferase	NA	NA	NA	NA
AVE10510.1\|1841154_1842135_+\|transposase	IS5-like element ISKpn26 family transposase	Q38213	Escherichia_phage	8.9e-185	99.1

DBSCAN-SWA_6

2835473 : 2846360

Escherichia_phage(87.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVE11437.1\|2835473_2838581_+	beta-galactosidase	L0N6M2	Herpes_simplex_virus	0.0e+00	59.6
AVE11438.1\|2838635_2839901_+	MFS transporter	NA	NA	NA	NA
AVE11439.1\|2839931_2841020_-	chromosome segregation protein SMC	A0A077SLJ9	Escherichia_phage	8.0e-211	100.0
AVE11440.1\|2841106_2841367_-	hypothetical protein	A0A077SK33	Escherichia_phage	3.5e-40	97.7
AVE11441.1\|2841664_2842525_+	class A broad-spectrum beta-lactamase SHV-11	A0A077SL40	Escherichia_phage	2.2e-155	99.3
AVE11442.1\|2842545_2843307_-	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	1.9e-134	100.0
AVE11443.1\|2843567_2844470_+	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	7.7e-159	99.3
AVE11444.1\|2844481_2845747_+	four-carbon acid sugar kinase family protein	A0A077SLJ7	Escherichia_phage	6.6e-233	99.5
AVE11445.1\|2845739_2846360_+	aldolase	A0A077SK32	Escherichia_phage	8.0e-115	100.0

DBSCAN-SWA_7

3029762 : 3102459

uncultured_Caudovirales_phage(33.33%)

transposase,plate,tail,head,protease,terminase,lysis

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVE11616.1\|3029762_3030848_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
AVE11617.1\|3030811_3032566_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
AVE11618.1\|3034237_3037663_-	type VI secretion protein VasK	NA	NA	NA	NA
AVE11619.1\|3037646_3038786_-	hypothetical protein	NA	NA	NA	NA
AVE11620.1\|3038782_3039040_-	PAAR domain-containing protein	NA	NA	NA	NA
AVE11621.1\|3039084_3041502_-	DUF2235 domain-containing protein	NA	NA	NA	NA
AVE11622.1\|3041489_3042020_-	DUF3304 domain-containing protein	NA	NA	NA	NA
AVE11623.1\|3042087_3042618_-	DUF3304 domain-containing protein	NA	NA	NA	NA
AVE11624.1\|3042686_3043217_-	DUF3304 domain-containing protein	NA	NA	NA	NA
AVE11625.1\|3043284_3043815_-	DUF3304 domain-containing protein	NA	NA	NA	NA
AVE11626.1\|3043883_3044414_-	DUF3304 domain-containing protein	NA	NA	NA	NA
AVE11627.1\|3044477_3045257_-	DUF4123 domain-containing protein	NA	NA	NA	NA
AVE11628.1\|3045257_3047636_-	type VI secretion system tip protein VgrG	A0A2H4JCD4	uncultured_Caudovirales_phage	9.2e-18	33.8
AVE11629.1\|3047628_3050283_-	type VI secretion system ATPase TssH	K4FB40	Cronobacter_phage	2.5e-96	33.4
AVE11630.1\|3050547_3051039_-	type VI secretion system tube protein Hcp	NA	NA	NA	NA
AVE11631.1\|3051043_3052750_-	OmpA family protein	NA	NA	NA	NA
AVE11632.1\|3052746_3053436_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
AVE13947.1\|3053432_3054773_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
AVE11633.1\|3054785_3056330_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
AVE11634.1\|3056372_3056864_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
AVE11635.1\|3057333_3058314_+\|transposase	IS5-like element ISKpn26 family transposase	Q38213	Escherichia_phage	8.9e-185	99.1
AVE11636.1\|3058352_3058496_-	ABC transporter	NA	NA	NA	NA
AVE11637.1\|3058909_3059158_+	damage-inducible protein DinI	S5MQI1	Escherichia_phage	1.4e-25	70.4
AVE11638.1\|3059380_3059665_-	hypothetical protein	NA	NA	NA	NA
AVE11639.1\|3059769_3059979_-	hypothetical protein	NA	NA	NA	NA
AVE11640.1\|3059975_3060707_-	hypothetical protein	NA	NA	NA	NA
AVE13948.1\|3060717_3061446_-	hypothetical protein	NA	NA	NA	NA
AVE11641.1\|3063796_3063994_-	hypothetical protein	NA	NA	NA	NA
AVE11642.1\|3063993_3064860_-	hypothetical protein	A0A2H4IYR0	uncultured_Caudovirales_phage	1.9e-34	64.5
AVE11643.1\|3064859_3065633_-	DUF2612 domain-containing protein	A0A2H4J1A9	uncultured_Caudovirales_phage	2.8e-77	54.4
AVE11644.1\|3065629_3066826_-	hypothetical protein	A0A0M4RD32	Salmonella_phage	3.9e-158	72.9
AVE11645.1\|3066825_3067179_-	hypothetical protein	A0A2H4J629	uncultured_Caudovirales_phage	2.3e-50	80.3
AVE11646.1\|3067180_3067834_-	hypothetical protein	A0A2H4J8H6	uncultured_Caudovirales_phage	1.0e-59	63.5
AVE11647.1\|3067887_3068454_-	hypothetical protein	NA	NA	NA	NA
AVE11648.1\|3068490_3068676_+	hypothetical protein	NA	NA	NA	NA
AVE11649.1\|3068728_3069070_-	hypothetical protein	A0A2H4J1A5	uncultured_Caudovirales_phage	1.8e-23	46.6
AVE11650.1\|3069069_3070092_-	hypothetical protein	A0A2H4J1B2	uncultured_Caudovirales_phage	9.2e-100	54.2
AVE11651.1\|3070094_3070397_-	hypothetical protein	A0A2H4J495	uncultured_Caudovirales_phage	2.0e-26	55.2
AVE11652.1\|3070397_3070997_-	hypothetical protein	A0A2H4J1B3	uncultured_Caudovirales_phage	9.9e-54	57.6
AVE11653.1\|3070996_3073000_-	lytic transglycosylase domain-containing protein	A0A2H4J9N7	uncultured_Caudovirales_phage	1.2e-247	63.6
AVE11654.1\|3072989_3073142_-	NTP pyrophosphohydrolase	A0A2H4J1A2	uncultured_Caudovirales_phage	7.6e-19	88.0
AVE11655.1\|3073177_3073603_-	hypothetical protein	A0A2H4J2V6	uncultured_Caudovirales_phage	2.6e-40	63.4
AVE11656.1\|3073606_3074047_-	DUF3277 domain-containing protein	A0A0M5M1K6	Salmonella_phage	3.3e-62	80.1
AVE11657.1\|3074057_3075203_-	DUF3383 domain-containing protein	A0A2H4J8G4	uncultured_Caudovirales_phage	6.3e-166	76.9
AVE11658.1\|3075206_3075647_-	hypothetical protein	A0A2H4J1A0	uncultured_Caudovirales_phage	1.6e-40	51.7
AVE11659.1\|3075741_3076128_-\|head,tail	head-tail adaptor	A0A2H4J1A4	uncultured_Caudovirales_phage	1.1e-48	78.2
AVE11660.1\|3076127_3076634_-	hypothetical protein	NA	NA	NA	NA
AVE11661.1\|3076630_3077050_-	DUF4054 domain-containing protein	A0A0M5M3S2	Salmonella_phage	3.3e-40	60.7
AVE11662.1\|3077018_3077300_-	hypothetical protein	NA	NA	NA	NA
AVE11663.1\|3077339_3078281_-	DUF2184 domain-containing protein	A0A2H4J191	uncultured_Caudovirales_phage	1.7e-137	77.1
AVE11664.1\|3078292_3078787_-	hypothetical protein	A0A2H4JHM9	uncultured_Caudovirales_phage	4.2e-50	62.7
AVE11665.1\|3078790_3079993_-	DUF2213 domain-containing protein	A0A0M4R5A6	Salmonella_phage	2.6e-106	54.1
AVE11666.1\|3080044_3080593_-	hypothetical protein	A0A0M4REK0	Salmonella_phage	3.0e-49	56.3
AVE11667.1\|3080648_3082100_-	hypothetical protein	A0A0M4S6U1	Salmonella_phage	3.8e-192	68.8
AVE11668.1\|3082337_3083738_-\|terminase	PBSX family phage terminase large subunit	A0A077KAW0	Edwardsiella_phage	9.4e-188	69.0
AVE11669.1\|3083688_3084441_-	hypothetical protein	A0A077KBY7	Edwardsiella_phage	4.0e-12	66.0
AVE11670.1\|3084542_3084863_-	negative regulator GrlR	NA	NA	NA	NA
AVE11671.1\|3085097_3085487_-	lipase chaperone	A0A192Y6H8	Salmonella_phage	9.4e-21	49.2
AVE11672.1\|3085483_3086014_-	lysozyme	K7PLY1	Enterobacteria_phage	2.7e-79	77.1
AVE11673.1\|3086016_3086265_-\|lysis	lysis protein	NA	NA	NA	NA
AVE11674.1\|3086670_3087453_-	antitermination protein	F1C595	Cronobacter_phage	7.2e-113	76.8
AVE11675.1\|3087449_3087926_-	hypothetical protein	A0A286N2Q1	Klebsiella_phage	1.8e-90	100.0
AVE11676.1\|3087922_3088885_-	DNA primase	A0A286N2Q0	Klebsiella_phage	4.8e-183	99.4
AVE11677.1\|3088886_3090545_-	helicase	A0A286N2P9	Klebsiella_phage	0.0e+00	96.0
AVE11678.1\|3090853_3091147_-	hypothetical protein	A0A286S2B5	Klebsiella_phage	2.8e-38	97.6
AVE11679.1\|3091121_3091343_-	XRE family transcriptional regulator	A0A286S2C1	Klebsiella_phage	3.0e-32	100.0
AVE11680.1\|3091440_3092109_+	LexA family transcriptional repressor	A0A286S2B2	Klebsiella_phage	2.4e-125	99.5
AVE11681.1\|3092279_3092594_+	hypothetical protein	A0A286S1T9	Klebsiella_phage	1.0e-49	100.0
AVE11682.1\|3092586_3092775_+	hypothetical protein	A0A286S1P8	Klebsiella_phage	4.6e-26	100.0
AVE11683.1\|3092944_3093310_+	hypothetical protein	A0A286S1Q6	Klebsiella_phage	6.9e-58	99.2
AVE11684.1\|3093302_3093557_+	hypothetical protein	A0A286SGR4	Klebsiella_phage	3.1e-41	97.6
AVE11685.1\|3093743_3094169_+	hypothetical protein	A0A286S1S2	Klebsiella_phage	3.5e-53	77.9
AVE11686.1\|3094165_3094360_+	hypothetical protein	NA	NA	NA	NA
AVE11687.1\|3094356_3095184_+\|protease	serine protease	Q8W654	Enterobacteria_phage	5.5e-111	84.0
AVE11688.1\|3095288_3095807_+	hypothetical protein	A0A286S1S7	Klebsiella_phage	1.7e-94	98.8
AVE11689.1\|3095812_3096523_+	DNA-binding protein	A0A286S260	Klebsiella_phage	2.1e-111	88.3
AVE11690.1\|3096512_3096737_+	hypothetical protein	A0A286S2B3	Klebsiella_phage	3.1e-29	89.2
AVE11691.1\|3096733_3096946_+	hypothetical protein	A0A286S2B6	Klebsiella_phage	3.4e-33	98.6
AVE11692.1\|3096942_3097422_+	hypothetical protein	NA	NA	NA	NA
AVE11693.1\|3097600_3097843_+	AlpA family transcriptional regulator	A0A0M4RTZ2	Salmonella_phage	2.2e-20	73.8
AVE11694.1\|3097823_3099005_-	DUF4102 domain-containing protein	A0A0M4QX09	Salmonella_phage	5.6e-202	84.2
AVE11695.1\|3099201_3099750_+\|protease	protease	NA	NA	NA	NA
AVE11696.1\|3099948_3101481_-	HD domain-containing protein	A0A1B1ISR1	uncultured_Mediterranean_phage	1.1e-21	30.0
AVE11697.1\|3101697_3102459_-	3-oxoacyl-ACP reductase	Q06VL0	Trichoplusia_ni_ascovirus	2.4e-20	32.5

DBSCAN-SWA_8

3265540 : 3353419

Klebsiella_phage(45.45%)

tail,integrase,holin,head,portal,tRNA,terminase,capsid

attL 3292343:3292357|attR 3351230:3351244

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVE11850.1\|3265540_3266041_+\|tRNA	YbaK/prolyl-tRNA synthetase associated domain-containing protein	NA	NA	NA	NA
AVE11851.1\|3266157_3266604_+	DUF441 domain-containing protein	NA	NA	NA	NA
AVE13955.1\|3266587_3267379_-	AraC family transcriptional regulator	NA	NA	NA	NA
AVE11852.1\|3267480_3268665_+	cyanate MFS transporter	NA	NA	NA	NA
AVE11853.1\|3268696_3269389_-	hypothetical protein	NA	NA	NA	NA
AVE11854.1\|3269534_3270044_+	DUF523 domain-containing protein	NA	NA	NA	NA
AVE11855.1\|3270030_3270387_+	DUF488 domain-containing protein	NA	NA	NA	NA
AVE11856.1\|3270376_3270616_-	DUF333 domain-containing protein	NA	NA	NA	NA
AVE11857.1\|3270916_3271930_+	sensor domain-containing diguanylate cyclase	A0A127AWB9	Bacillus_phage	1.4e-12	29.0
AVE11858.1\|3271987_3272089_+	hypothetical protein	NA	NA	NA	NA
AVE13956.1\|3272088_3272163_+	hypothetical protein	NA	NA	NA	NA
AVE11859.1\|3272280_3272406_+	hypothetical protein	NA	NA	NA	NA
AVE11860.1\|3272465_3272729_-	DUF2534 domain-containing protein	NA	NA	NA	NA
AVE11861.1\|3272859_3273498_-	leucine efflux protein	NA	NA	NA	NA
AVE11862.1\|3273587_3274502_-	kdo(2)-lipid IV(A) palmitoleoyltransferase	A0A1W6JP29	Morganella_phage	1.1e-72	50.4
AVE11863.1\|3274717_3274909_+	hypothetical protein	NA	NA	NA	NA
AVE11864.1\|3275163_3276207_-	type II asparaginase	NA	NA	NA	NA
AVE11865.1\|3276509_3277718_+	phosphodiesterase	NA	NA	NA	NA
AVE11866.1\|3277791_3279576_+	sensor domain-containing diguanylate cyclase	A0A127AWB9	Bacillus_phage	5.8e-17	36.1
AVE11867.1\|3279582_3280473_-	LysR family transcriptional regulator	NA	NA	NA	NA
AVE11868.1\|3280593_3282102_+	3,4-dihydroxybenzoate decarboxylase	NA	NA	NA	NA
AVE11869.1\|3282412_3283099_-	diguanylate phosphodiesterase	NA	NA	NA	NA
AVE11870.1\|3283496_3283676_-	hypothetical protein	NA	NA	NA	NA
AVE11871.1\|3283715_3284348_-	DNA-binding protein	NA	NA	NA	NA
AVE11872.1\|3284914_3285112_+	hypothetical protein	NA	NA	NA	NA
AVE11873.1\|3285227_3286238_-	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA
AVE11874.1\|3286234_3287641_-	cytochrome ubiquinol oxidase subunit I	NA	NA	NA	NA
AVE11875.1\|3287696_3288584_-	Mn-containing catalase	NA	NA	NA	NA
AVE11876.1\|3288600_3289107_-	ferritin-like domain-containing protein	NA	NA	NA	NA
AVE11877.1\|3289133_3289628_-	ferritin-like domain-containing protein	NA	NA	NA	NA
AVE11878.1\|3289718_3289904_-	stress-induced acidophilic repeat motif-containing protein	NA	NA	NA	NA
AVE11879.1\|3290525_3291719_+	glutathione-dependent formaldehyde dehydrogenase	NA	NA	NA	NA
AVE11880.1\|3291831_3292059_+	DUF1272 domain-containing protein	NA	NA	NA	NA
3292343:3292357	attL	NA	NA	NA	NA
AVE11881.1\|3292495_3292819_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
AVE11882.1\|3292811_3293204_+	amino acid-binding protein	NA	NA	NA	NA
AVE11883.1\|3293200_3293914_+	ArsR family transcriptional regulator	NA	NA	NA	NA
AVE11884.1\|3294186_3294339_-	isocitrate dehydrogenase	Q77Z09	Phage_21	3.8e-18	92.0
AVE11885.1\|3294493_3295990_-\|tail	phage tail protein	A0A0P0IDN1	Klebsiella_phage	1.4e-125	63.7
AVE11886.1\|3296058_3308763_-	DUF1983 domain-containing protein	Q6UAW1	Klebsiella_phage	0.0e+00	47.1
AVE11887.1\|3308825_3309419_-\|tail	tail assembly protein	K7PHE5	Enterobacteria_phage	8.0e-80	76.6
AVE11888.1\|3309445_3309868_-	hypothetical protein	J9Q806	Salmonella_phage	5.9e-29	50.0
AVE11889.1\|3309909_3310620_-	peptidase P60	Q6UAW4	Klebsiella_phage	1.9e-136	90.3
AVE11890.1\|3310621_3311377_-\|tail	phage minor tail protein L	Q6UAW5	Klebsiella_phage	4.6e-125	80.5
AVE11891.1\|3311373_3311712_-\|tail	phage tail protein	Q6UAW6	Klebsiella_phage	1.4e-57	88.4
AVE11892.1\|3311711_3315047_-\|tail	phage tail tape measure protein	Q6UAW7	Klebsiella_phage	0.0e+00	88.3
AVE11893.1\|3315046_3315265_-	hypothetical protein	Q6UAW9	Klebsiella_phage	5.4e-34	90.5
AVE11894.1\|3315279_3315645_-\|tail	phage tail protein	Q6UAW8	Klebsiella_phage	1.6e-51	89.3
AVE11895.1\|3315702_3316164_-\|tail	phage tail protein	Q6UAX0	Klebsiella_phage	7.8e-67	83.7
AVE11896.1\|3316195_3316597_-	hypothetical protein	Q6UAX1	Klebsiella_phage	2.3e-62	94.0
AVE11897.1\|3316593_3316983_-	hypothetical protein	Q6UAX2	Klebsiella_phage	9.6e-58	86.0
AVE11898.1\|3316963_3317302_-\|head,tail	head-tail adaptor protein	Q6UAX3	Klebsiella_phage	2.8e-53	90.2
AVE11899.1\|3317298_3317616_-\|head,tail	phage gp6-like head-tail connector protein	Q6UAX4	Klebsiella_phage	1.5e-45	89.8
AVE11900.1\|3317596_3317857_-	hypothetical protein	Q6UAX5	Klebsiella_phage	7.4e-22	60.5
AVE11901.1\|3317915_3319202_-\|capsid	phage major capsid protein	Q6UAX6	Klebsiella_phage	9.8e-216	89.0
AVE11902.1\|3319279_3320200_-	S49 family peptidase	Q6UAX7	Klebsiella_phage	9.6e-149	88.2
AVE11903.1\|3320236_3321496_-\|portal	phage portal protein	Q6UAX8	Klebsiella_phage	1.8e-222	89.8
AVE11904.1\|3321495_3321675_-	hypothetical protein	Q6UAX9	Klebsiella_phage	3.1e-11	57.6
AVE11905.1\|3321668_3323390_-\|terminase	terminase large subunit	Q7Y413	Yersinia_phage	1.5e-190	57.4
AVE11906.1\|3323389_3323824_-\|terminase	phage terminase small subunit P27 family	A0A1J0GV10	Halomonas_phage	9.4e-30	61.9
AVE11907.1\|3324072_3324504_-	hypothetical protein	Q6UAS0	Klebsiella_phage	1.8e-41	61.6
AVE11908.1\|3324500_3324824_-	hypothetical protein	NA	NA	NA	NA
AVE11909.1\|3324775_3325138_-	HNH endonuclease	Q6UAS2	Klebsiella_phage	1.2e-57	83.3
AVE11910.1\|3325464_3325689_+	hypothetical protein	NA	NA	NA	NA
AVE11911.1\|3325727_3326180_-	hypothetical protein	NA	NA	NA	NA
AVE11912.1\|3327114_3327465_-	hypothetical protein	R9TPM9	Aeromonas_phage	7.9e-11	38.1
AVE11913.1\|3327461_3327959_-	lysozyme	A0A1V0E5Q7	Salmonella_phage	1.1e-77	84.6
AVE11914.1\|3327958_3328174_-\|holin	holin	A5LH82	Enterobacteria_phage	2.7e-30	88.7
AVE11915.1\|3330425_3331028_-	hypothetical protein	H9C175	Pectobacterium_phage	1.1e-76	68.6
AVE11916.1\|3331044_3332076_-	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	4.7e-96	49.6
AVE11917.1\|3332075_3332279_-	hypothetical protein	NA	NA	NA	NA
AVE11918.1\|3332275_3332668_-	DNA-binding protein	K7PHB4	Enterobacterial_phage	8.0e-12	36.6
AVE11919.1\|3332708_3332999_-	hypothetical protein	H6WRY6	Salmonella_phage	8.0e-17	56.9
AVE11920.1\|3333010_3333244_-	DinI family protein	K7PM44	Enterobacteria_phage	3.7e-25	71.1
AVE11921.1\|3333322_3334807_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5
AVE11922.1\|3334806_3335058_-	hypothetical protein	NA	NA	NA	NA
AVE11923.1\|3335647_3337009_-	dGTPase	NA	NA	NA	NA
AVE11924.1\|3337182_3337896_-	hypothetical protein	NA	NA	NA	NA
AVE13957.1\|3338247_3339117_+	hypothetical protein	NA	NA	NA	NA
AVE11925.1\|3339205_3340597_+	hypothetical protein	NA	NA	NA	NA
AVE11926.1\|3340945_3341386_-	hypothetical protein	NA	NA	NA	NA
AVE11927.1\|3341399_3341864_-	replication protein	A0A0U2JGJ0	Escherichia_phage	4.1e-63	72.2
AVE13958.1\|3341856_3342861_-	DNA-binding protein	A0A0U2RT81	Escherichia_phage	1.0e-31	40.0
AVE11928.1\|3342920_3343475_-	hypothetical protein	NA	NA	NA	NA
AVE11929.1\|3343477_3343702_-	Cro/Cl family transcriptional regulator	H6WRX5	Salmonella_phage	1.3e-19	62.5
AVE11930.1\|3343790_3344228_+	helix-turn-helix domain-containing protein	H6WRX4	Salmonella_phage	1.3e-39	62.2
AVE11931.1\|3344549_3344864_-	hypothetical protein	NA	NA	NA	NA
AVE11932.1\|3345026_3345245_+	hypothetical protein	NA	NA	NA	NA
AVE11933.1\|3345254_3345449_+	DUF1482 domain-containing protein	NA	NA	NA	NA
AVE11934.1\|3345491_3345836_+	transcriptional regulator	NA	NA	NA	NA
AVE11935.1\|3345977_3348116_+	exonuclease	S4TNL0	Salmonella_phage	5.6e-99	42.7
AVE11936.1\|3348168_3348414_+	excisionase	NA	NA	NA	NA
AVE11937.1\|3348394_3349522_+\|integrase	integrase	O21925	Phage_21	4.4e-119	58.4
AVE11938.1\|3349639_3350890_-	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	1.1e-19	92.6
AVE11939.1\|3351130_3351781_+	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA
3351230:3351244	attR	NA	NA	NA	NA
AVE11940.1\|3351797_3352256_+	NUDIX hydrolase	NA	NA	NA	NA
AVE13959.1\|3352312_3353419_+\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA

DBSCAN-SWA_9

3462994 : 3495608

Enterobacteria_phage(41.38%)

plate,tail,integrase,portal,terminase,capsid

attL 3461154:3461174|attR 3495678:3495698

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3461154:3461174	attL	NA	NA	NA	NA
AVE12043.1\|3462994_3464149_-	hypothetical protein	B9A7A9	Serratia_phage	6.6e-171	77.2
AVE12044.1\|3464300_3465482_+\|tail	phage tail protein	A0A0A7NV69	Enterobacteria_phage	8.0e-156	69.4
AVE12045.1\|3465482_3465998_+\|tail	phage major tail tube protein	A0A0A7NPV8	Enterobacteria_phage	2.6e-63	70.0
AVE12046.1\|3466049_3466349_+\|tail	phage tail protein	B9A7B2	Serratia_phage	2.9e-30	72.7
AVE12047.1\|3466369_3466522_+\|tail	GpE family phage tail protein	O80316	Escherichia_phage	1.5e-11	71.4
AVE12048.1\|3466511_3469247_+\|tail	phage tail tape measure protein	B9A7B3	Serratia_phage	2.0e-242	80.6
AVE12049.1\|3469258_3469747_+\|tail	phage tail protein	A0A0A7NV65	Enterobacteria_phage	2.9e-51	59.9
AVE12050.1\|3469844_3470921_-\|tail	phage tail protein	Q37842	Escherichia_phage	2.3e-32	48.3
AVE12051.1\|3470932_3471676_-	hypothetical protein	NA	NA	NA	NA
AVE12052.1\|3471681_3473946_-	hypothetical protein	B5TAB2	Burkholderia_phage	5.7e-102	39.7
AVE12053.1\|3473947_3474550_-\|tail	phage tail protein I	A0A1S6L000	Salmonella_phage	1.8e-42	44.8
AVE12054.1\|3474542_3475442_-\|plate	baseplate assembly protein	A0A0A7NPY5	Enterobacteria_phage	6.2e-92	62.2
AVE12055.1\|3475428_3475797_-\|plate	baseplate assembly protein	A0A0A7NQ90	Enterobacteria_phage	2.3e-29	57.4
AVE12056.1\|3475793_3476378_-\|plate	phage baseplate assembly protein V	A0A0A7NRZ3	Enterobacteria_phage	8.7e-63	61.4
AVE12057.1\|3476377_3477019_-	phage virion morphogenesis protein	A0A0M4RCU1	Salmonella_phage	1.4e-45	49.8
AVE12058.1\|3477015_3477474_-\|tail	phage tail protein	A0A0A7NPU6	Enterobacteria_phage	3.1e-31	46.8
AVE13965.1\|3477470_3477734_-	peptidase	NA	NA	NA	NA
AVE12059.1\|3478010_3478562_-	lysozyme	Q1I0Z1	Pasteurella_virus	6.8e-33	42.5
AVE12060.1\|3478558_3478840_-	hypothetical protein	NA	NA	NA	NA
AVE12061.1\|3478830_3479031_-\|tail	phage tail protein	A0A0A7NV57	Enterobacteria_phage	3.0e-15	64.6
AVE12062.1\|3479030_3479528_-\|capsid	capsid assembly protein	B9A7B7	Serratia_phage	2.2e-59	69.7
AVE12063.1\|3479630_3480491_-\|terminase	terminase	B9A7B6	Serratia_phage	1.0e-83	68.4
AVE12064.1\|3480537_3481587_-\|capsid	phage major capsid protein, P2 family	A0A0M3ULA3	Salmonella_phage	2.3e-106	53.9
AVE12065.1\|3481610_3482444_-\|capsid	phage capsid protein	A0A0A7NRY7	Enterobacteria_phage	6.5e-96	65.3
AVE12066.1\|3482604_3484326_+	oxidoreductase	A0A0A7NV54	Enterobacteria_phage	4.3e-227	66.5
AVE12067.1\|3484346_3485381_+\|portal	phage portal protein	A0A0A7NPT9	Enterobacteria_phage	2.0e-139	68.6
AVE13966.1\|3485788_3486103_-	hypothetical protein	NA	NA	NA	NA
AVE12068.1\|3486375_3486783_-	hypothetical protein	NA	NA	NA	NA
AVE12069.1\|3486954_3489549_-	replication endonuclease	A0A0M4RTM8	Salmonella_phage	1.1e-192	51.7
AVE12070.1\|3489541_3490558_-	DNA cytosine methyltransferase	Q6J1P4	Burkholderia_virus	2.4e-92	54.8
AVE12071.1\|3490859_3491828_-	adenine methylase	A0A0M4QWR0	Salmonella_phage	3.1e-73	49.1
AVE12072.1\|3491836_3492415_-	3'-5' exoribonuclease	A0A192Y6E0	Salmonella_phage	2.7e-32	39.5
AVE12073.1\|3492411_3492636_-	hypothetical protein	NA	NA	NA	NA
AVE12074.1\|3492703_3492976_-	hypothetical protein	NA	NA	NA	NA
AVE12075.1\|3492991_3493378_-	hypothetical protein	NA	NA	NA	NA
AVE13967.1\|3493394_3493592_-	DUF4761 domain-containing protein	NA	NA	NA	NA
AVE12076.1\|3493783_3494116_-	hypothetical protein	NA	NA	NA	NA
AVE12077.1\|3494210_3494513_+	XRE family transcriptional regulator	Q1JS63	Enterobacteria_phage	2.6e-26	61.0
AVE12078.1\|3494600_3495608_+\|integrase	integrase	A0A0M4RTQ0	Salmonella_phage	7.6e-99	52.1
3495678:3495698	attR	NA	NA	NA	NA

DBSCAN-SWA_10

3603922 : 3699983

101

Salmonella_phage(55.0%)

transposase,plate,tail,integrase,head,portal,protease,tRNA,capsid

attL 3659448:3659466|attR 3700058:3700076

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVE12171.1\|3603922_3605215_-\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	7.3e-94	44.7
AVE12172.1\|3605305_3606649_-	replication-associated recombination protein A	G3MBE0	Bacillus_virus	7.3e-81	40.8
AVE12173.1\|3606657_3607269_-	outer membrane lipoprotein carrier protein LolA	NA	NA	NA	NA
AVE12174.1\|3607391_3611645_-	DNA translocase FtsK	S5VNE3	Mycobacterium_phage	5.2e-88	49.2
AVE12175.1\|3611780_3612275_-	leucine-responsive regulatory protein	NA	NA	NA	NA
AVE12176.1\|3612807_3613776_+	thioredoxin-disulfide reductase	A0A2I2L5E1	Orpheovirus	3.2e-62	44.0
AVE12177.1\|3613890_3615657_+	thiol reductant ABC exporter subunit CydD	W8CYL7	Bacillus_phage	2.3e-21	25.9
AVE12178.1\|3615657_3617379_+	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	A0A2R8FG22	Brazilian_cedratvirus	1.5e-14	34.3
AVE12179.1\|3617423_3618125_+\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
AVE12180.1\|3618478_3618697_+	translation initiation factor IF-1	NA	NA	NA	NA
AVE12181.1\|3618817_3621097_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	1.6e-165	42.0
AVE12182.1\|3621127_3621445_-\|protease	ATP-dependent Clp protease adaptor ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	2.0e-13	45.7
AVE12183.1\|3621770_3621992_+	cold shock domain protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	1.3e-16	61.2
AVE12184.1\|3621946_3622129_-	hypothetical protein	NA	NA	NA	NA
AVE12185.1\|3622068_3624009_-	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	1.9e-37	40.5
AVE12186.1\|3624005_3625121_-	macrolide transporter subunit MacA	A0A140XAI1	Dickeya_phage	1.3e-06	52.7
AVE12187.1\|3625267_3626926_-	ATP-dependent endonuclease	NA	NA	NA	NA
AVE12188.1\|3627345_3628041_+	aquaporin Z	NA	NA	NA	NA
AVE12189.1\|3628156_3629056_+	lysine exporter LysO family protein	NA	NA	NA	NA
AVE13972.1\|3629199_3630852_+	hydroxylamine reductase	NA	NA	NA	NA
AVE12190.1\|3630862_3631831_+	NADH oxidoreductase	NA	NA	NA	NA
AVE12191.1\|3631781_3631985_+	hypothetical protein	NA	NA	NA	NA
AVE12192.1\|3632042_3632477_-	DoxX family protein	NA	NA	NA	NA
AVE13973.1\|3632628_3634347_+	ubiquinone-dependent pyruvate dehydrogenase	NA	NA	NA	NA
AVE12193.1\|3634385_3635387_+	low-specificity L-threonine aldolase	NA	NA	NA	NA
AVE12194.1\|3635397_3636840_+	DUF2867 domain-containing protein	NA	NA	NA	NA
AVE12195.1\|3636927_3637941_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
AVE12196.1\|3637937_3638768_-	N-acetylmuramoyl-L-alanine amidase	A0A1B0UZW5	Roseobacter_phage	4.1e-05	31.6
AVE12197.1\|3638799_3639939_-	GGDEF domain-containing protein	NA	NA	NA	NA
AVE12198.1\|3639991_3640171_+	hypothetical protein	NA	NA	NA	NA
AVE12199.1\|3640816_3641332_+	lipoprotein	NA	NA	NA	NA
AVE12200.1\|3641558_3642287_+	arginine ABC transporter ATP-binding protein ArtP	G9BWD6	Planktothrix_phage	1.2e-29	37.1
AVE13974.1\|3642307_3643039_+	arginine ABC transporter substrate-binding protein	NA	NA	NA	NA
AVE12201.1\|3643045_3643762_+	arginine ABC transporter permease ArtQ	NA	NA	NA	NA
AVE12202.1\|3643761_3644430_+	arginine ABC transporter permease ArtM	NA	NA	NA	NA
AVE12203.1\|3644613_3645345_+	arginine ABC transporter substrate-binding protein	NA	NA	NA	NA
AVE12204.1\|3645387_3646860_-	two-component sensor histidine kinase	W8CYF6	Bacillus_phage	7.9e-28	31.8
AVE12205.1\|3646856_3647573_-	DNA-binding response regulator	W8CYM9	Bacillus_phage	2.1e-34	36.9
AVE12206.1\|3647651_3648779_-	23S rRNA (uracil(747)-C(5))-methyltransferase RlmC	A0A2K5B251	Erysipelothrix_phage	1.3e-19	25.6
AVE12207.1\|3648820_3649309_-	DUF2593 domain-containing protein	NA	NA	NA	NA
AVE12208.1\|3649366_3650212_-	putrescine ABC transporter permease PotI	NA	NA	NA	NA
AVE12209.1\|3650208_3651162_-	putrescine ABC transporter permease	NA	NA	NA	NA
AVE13975.1\|3651172_3652306_-	polyamine ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	2.2e-30	34.9
AVE12210.1\|3652469_3653582_-	spermidine/putrescine ABC transporter substrate-binding protein PotF	NA	NA	NA	NA
AVE12211.1\|3653930_3654410_-	YbjN domain-containing protein	NA	NA	NA	NA
AVE12212.1\|3654498_3655401_-	30S ribosomal protein S6--L-glutamate ligase	A0A1D7SR78	Cyanophage	2.0e-34	35.3
AVE12213.1\|3656222_3656510_-	hypothetical protein	NA	NA	NA	NA
AVE12214.1\|3656712_3656976_+	GrxA family glutaredoxin	A0A2I7SAE2	Vibrio_phage	1.6e-27	73.1
AVE12215.1\|3656982_3657366_-	hypothetical protein	NA	NA	NA	NA
AVE13976.1\|3657632_3659318_+	transporter	NA	NA	NA	NA
3659448:3659466	attL	NA	NA	NA	NA
AVE12216.1\|3659537_3659756_-	transcriptional regulator	Q53ZE7	Salmonella_virus	7.5e-20	69.0
AVE12217.1\|3659847_3660948_-	late control protein D	A0A1S6KZZ5	Salmonella_phage	4.9e-176	87.4
AVE12218.1\|3660944_3661430_-\|tail	phage tail protein	E5G6Q2	Salmonella_phage	7.2e-63	75.6
AVE12219.1\|3661426_3664054_-\|tail	phage tail tape measure protein	E5FFG5	Burkholderia_phage	5.6e-117	42.0
AVE12220.1\|3664046_3664166_-\|tail	GpE family phage tail protein	E5G6Q0	Salmonella_phage	2.2e-13	87.2
AVE12221.1\|3664180_3664480_-\|tail	phage tail assembly protein	E5G6P9	Salmonella_phage	3.7e-33	79.0
AVE12222.1\|3664532_3665048_-\|tail	phage major tail tube protein	E5G6P8	Salmonella_phage	1.3e-81	85.4
AVE12223.1\|3665057_3666230_-\|tail	phage tail protein	A0A1S6KZY7	Salmonella_phage	1.9e-210	93.3
AVE12224.1\|3666368_3667445_-\|tail	phage tail protein	Q37842	Escherichia_phage	1.2e-25	44.8
AVE12225.1\|3667474_3667678_-	hypothetical protein	NA	NA	NA	NA
AVE12226.1\|3667674_3668406_-	hypothetical protein	NA	NA	NA	NA
AVE12227.1\|3668409_3671361_-	hypothetical protein	A0A2H4N7A3	Pectobacterium_phage	1.2e-06	50.9
AVE13977.1\|3671362_3671962_-\|tail	phage tail protein I	A0A1S6L000	Salmonella_phage	1.3e-58	60.5
AVE12228.1\|3671954_3672863_-\|plate	baseplate assembly protein	E5G6N8	Salmonella_phage	7.6e-106	66.9
AVE12229.1\|3672849_3673212_-\|plate	baseplate assembly protein	A0A1S6KZZ4	Salmonella_phage	4.9e-48	83.9
AVE12230.1\|3673208_3673781_-\|plate	phage baseplate assembly protein V	E5G6N6	Salmonella_phage	4.7e-77	72.3
AVE13978.1\|3673964_3674102_+	ABC transporter	NA	NA	NA	NA
AVE12231.1\|3674140_3675121_-\|transposase	IS5 family transposase ISKpn26	A0A077SK28	Escherichia_phage	1.0e-185	99.4
AVE12232.1\|3675258_3675768_+	hypothetical protein	NA	NA	NA	NA
AVE12233.1\|3675764_3676211_-	phage virion morphogenesis protein	A0A1S6L001	Salmonella_phage	2.2e-50	71.2
AVE12234.1\|3676203_3676635_-\|tail	phage tail protein	A0A1S6KZY0	Salmonella_phage	9.9e-64	82.5
AVE12235.1\|3676730_3677159_-	hypothetical protein	A0A1S6KZX8	Salmonella_phage	9.6e-51	77.9
AVE12236.1\|3677155_3677539_-	hypothetical protein	A0A1S6KZZ2	Salmonella_phage	2.1e-17	42.0
AVE12237.1\|3677543_3678053_-	lysozyme	E5G6N1	Salmonella_phage	2.1e-81	83.4
AVE12238.1\|3678033_3678249_-	hypothetical protein	E5G6N0	Salmonella_phage	3.6e-30	90.1
AVE12239.1\|3678252_3678456_-\|tail	phage tail protein	A0A1S6KZY4	Salmonella_phage	1.3e-29	88.1
AVE12240.1\|3678455_3678920_-\|head	head completion/stabilization protein	A0A1S6KZW8	Salmonella_phage	8.4e-77	89.0
AVE12241.1\|3679015_3679666_-	hypothetical protein	E5G6M7	Salmonella_phage	8.7e-112	96.3
AVE12242.1\|3679669_3680728_-\|capsid	phage major capsid protein, P2 family	E5G6M6	Salmonella_phage	1.1e-180	93.1
AVE12243.1\|3680744_3681578_-\|capsid	capsid protein	A0A1S6KZW9	Salmonella_phage	6.3e-123	88.8
AVE12244.1\|3681720_3683487_+	oxidoreductase	A0A1S6KZW3	Salmonella_phage	0.0e+00	99.0
AVE12245.1\|3683486_3684512_+\|portal	phage portal protein	A0A1S6KZW5	Salmonella_phage	7.6e-171	86.7
AVE12246.1\|3684573_3686316_-	hypothetical protein	NA	NA	NA	NA
AVE12247.1\|3686591_3687269_-	hypothetical protein	NA	NA	NA	NA
AVE12248.1\|3687383_3687689_-	DinI family protein	E5G6M1	Salmonella_phage	4.7e-36	100.0
AVE13979.1\|3687627_3687816_-	hypothetical protein	E5G6M0	Salmonella_phage	5.5e-27	98.4
AVE12249.1\|3687916_3689401_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5
AVE12250.1\|3689400_3689652_-	hypothetical protein	NA	NA	NA	NA
AVE12251.1\|3689879_3692294_-	replication endonuclease	E5G6L9	Salmonella_phage	0.0e+00	97.5
AVE12252.1\|3692290_3693148_-	DNA adenine methylase	E5G6L8	Salmonella_phage	2.0e-156	95.4
AVE12253.1\|3693144_3693372_-	hypothetical protein	E5G6L7	Salmonella_phage	6.0e-36	98.7
AVE12254.1\|3693371_3693605_-	DUF2732 domain-containing protein	E5G6L6	Salmonella_phage	4.1e-32	96.1
AVE12255.1\|3693672_3694014_-	hypothetical protein	E5G6L5	Salmonella_phage	4.6e-56	99.1
AVE12256.1\|3693977_3694178_-	DUF2724 domain-containing protein	E5G6L4	Salmonella_phage	1.6e-32	97.0
AVE12257.1\|3694185_3694695_-	hypothetical protein	E5G6L3	Salmonella_phage	5.8e-87	98.8
AVE12258.1\|3694727_3694949_-	regulator	NA	NA	NA	NA
AVE12259.1\|3695094_3695973_+	Repressor protein CI	A0A1S6KZZ7	Salmonella_phage	1.7e-30	39.9
AVE12260.1\|3695984_3696929_+	hypothetical protein	NA	NA	NA	NA
AVE12261.1\|3697027_3698512_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5
AVE12262.1\|3698511_3698763_-	hypothetical protein	NA	NA	NA	NA
AVE12263.1\|3698930_3699983_+\|integrase	integrase	A0A218M4I3	Erwinia_phage	1.0e-106	57.0
3700058:3700076	attR	NA	NA	NA	NA

DBSCAN-SWA_11

4351766 : 4363419

Enterobacteria_phage(70.0%)

integrase

attL 4352216:4352230|attR 4375272:4375286

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVE12846.1\|4351766_4352870_+	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	4.8e-62	40.5
4352216:4352230	attL	NA	NA	NA	NA
AVE12847.1\|4352880_4354134_+	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	8.9e-89	44.9
AVE12848.1\|4354486_4355677_+\|integrase	integrase	Q7M297	Enterobacteria_phage	6.4e-145	62.7
AVE12849.1\|4355664_4356615_+	cobyrinic acid a,c-diamide synthase	A0A1X9IGI7	Lactococcus_phage	1.2e-13	27.1
AVE12850.1\|4356614_4357040_+	hypothetical protein	NA	NA	NA	NA
AVE12851.1\|4357607_4358174_-	Polarity suppression protein	Q7M2A1	Enterobacteria_phage	9.7e-59	63.8
AVE12852.1\|4358191_4358437_-	hypothetical protein	Q7M294	Enterobacteria_phage	5.5e-19	56.8
AVE12853.1\|4358433_4359171_-	glycoprotein 3	Q7M2A2	Enterobacteria_phage	1.9e-70	59.4
AVE12854.1\|4359712_4359979_+	AlpA family transcriptional regulator	Q7M299	Enterobacteria_phage	2.6e-30	71.6
AVE12855.1\|4359975_4360533_+	Ash-like/host cell division inhibitor Icd-like protein	Q7M2A7	Enterobacteria_phage	1.8e-33	70.4
AVE12856.1\|4360529_4360757_+	hypothetical protein	NA	NA	NA	NA
AVE12857.1\|4360753_4361074_+	hypothetical protein	NA	NA	NA	NA
AVE12858.1\|4361085_4363419_+	DNA primase	Q7M2A8	Enterobacteria_phage	0.0e+00	82.2
4375272:4375286	attR	NA	NA	NA	NA

DBSCAN-SWA_12

4831656 : 4841181

Enterobacteria_phage(83.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVE13262.1\|4831656_4833990_-	DNA primase	Q7M2A8	Enterobacteria_phage	0.0e+00	83.9
AVE13263.1\|4834004_4834325_-	hypothetical protein	NA	NA	NA	NA
AVE13264.1\|4834321_4834549_-	hypothetical protein	NA	NA	NA	NA
AVE13265.1\|4834545_4835094_-	Ash-like/host cell division inhibitor Icd-like protein	Q7M2A7	Enterobacteria_phage	1.1e-30	69.4
AVE13266.1\|4835917_4836655_+	glycoprotein 3	Q7M2A2	Enterobacteria_phage	1.1e-70	59.4
AVE13267.1\|4836651_4836897_+	hypothetical protein	Q7M294	Enterobacteria_phage	5.5e-19	56.8
AVE13268.1\|4836914_4837481_+	Polarity suppression protein	Q7M2A1	Enterobacteria_phage	9.7e-59	63.8
AVE13269.1\|4838221_4839301_+	hypothetical protein	NA	NA	NA	NA
AVE13270.1\|4839301_4839838_+	hypothetical protein	NA	NA	NA	NA
AVE13271.1\|4840200_4841181_+\|transposase	IS5 family transposase ISKpn26	A0A077SK28	Escherichia_phage	1.0e-185	99.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. CP026584

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1796 : 21170

Escherichia_phage(50.0%)

transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVE08598.1\|1796_2450_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
AVE08599.1\|2669_3134_+	mRNA interferase PemK	NA	NA	NA	NA
AVE08600.1\|3130_3235_+	hypothetical protein	NA	NA	NA	NA
AVE08601.1\|4444_5149_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AVE08602.1\|6417_7299_-	carbapenem-hydrolyzing class A beta-lactamase KPC-2	A0A1B0VBP7	Salmonella_phage	2.2e-73	52.2
AVE08603.1\|7574_8555_-\|transposase	IS481 family transposase ISKpn27	A8RHK4	Spiroplasma_virus	2.9e-10	27.4
AVE08604.1\|8677_9151_-	recombinase	Q1MVP4	Enterobacteria_phage	3.3e-76	99.3
AVE08605.1\|9190_9895_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AVE08606.1\|10405_11281_+	class A extended-spectrum beta-lactamase CTX-M-65	A0A1B0VBP7	Salmonella_phage	6.8e-152	98.9
AVE08607.1\|11360_12284_+\|transposase	IS5/IS1182 family transposase	Q9MCT5	Escherichia_phage	2.2e-177	99.7
AVE08608.1\|14034_14739_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AVE08609.1\|15849_16554_+\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AVE08610.1\|17231_17420_-	hypothetical protein	NA	NA	NA	NA
AVE08773.1\|17511_18048_+	recombinase	Q1MVP4	Enterobacteria_phage	2.8e-84	100.0
AVE08611.1\|18230_19091_+	class A broad-spectrum beta-lactamase TEM-1	Q1MVP3	Enterobacteria_phage	4.6e-161	100.0
AVE08612.1\|19260_20016_+	16S rRNA (guanine(1405)-N(7))-methyltransferase RmtB1	NA	NA	NA	NA
AVE08613.1\|20465_21170_-\|transposase	IS6 family transposase IS15DI	A0A077SL39	Escherichia_phage	1.2e-138	99.6

DBSCAN-SWA_2

85132 : 98938

Enterobacteria_phage(18.18%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVE08686.1\|85132_85393_-	DNA polymerase III subunit theta	H9C187	Pectobacterium_phage	4.1e-12	46.2
AVE08687.1\|85579_85771_-	hypothetical protein	NA	NA	NA	NA
AVE08688.1\|85813_86320_-	antirestriction protein	A0A1I9S7Y0	Rhodococcus_phage	4.8e-09	31.8
AVE08689.1\|86724_87504_-	hypothetical protein	NA	NA	NA	NA
AVE08690.1\|87557_87977_-	DUF1380 domain-containing protein	NA	NA	NA	NA
AVE08691.1\|87987_88209_-	hypothetical protein	NA	NA	NA	NA
AVE08692.1\|88208_88886_-	DNA methylase	A0A2I7RE86	Vibrio_phage	1.6e-28	36.9
AVE08693.1\|89244_89916_+	DNA breaking-rejoining protein	A0A2H4J5W2	uncultured_Caudovirales_phage	5.1e-83	61.7
AVE08694.1\|90095_90518_+	peptidase	A0A1W6JNS2	Morganella_phage	3.1e-30	51.5
AVE08695.1\|90517_91789_+	translesion error-prone DNA polymerase V subunit UmuC	F1C5A5	Cronobacter_phage	6.1e-154	63.0
AVE08696.1\|91924_92896_-	ParB/RepB/Spo0J family partition protein	Q1MVJ4	Enterobacteria_phage	1.4e-113	68.9
AVE08697.1\|92892_94098_-	ParA family protein	Q1MVJ3	Enterobacteria_phage	1.1e-205	89.2
AVE08698.1\|94460_95093_+	LacI family DNA-binding transcriptional regulator	A0A1V0E035	Clostridioides_phage	2.5e-07	31.9
AVE08699.1\|95146_95347_+	hypothetical protein	NA	NA	NA	NA
AVE08700.1\|95493_96444_+\|transposase	ISNCY family transposase	Q2A0A7	Sodalis_phage	6.6e-76	55.6
AVE08701.1\|96440_97052_-	DUF2913 domain-containing protein	NA	NA	NA	NA
AVE08778.1\|97048_97444_-	hypothetical protein	NA	NA	NA	NA
AVE08702.1\|97957_98938_+\|transposase	IS5 family transposase ISKpn26	A0A077SK28	Escherichia_phage	1.0e-185	99.4

DBSCAN-SWA_3

124774 : 135933

Escherichia_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVE08741.1\|124774_125476_-	DNA methylase	A0A2I7RE86	Vibrio_phage	1.6e-26	36.2
AVE08742.1\|125912_126143_-	hypothetical protein	NA	NA	NA	NA
AVE08743.1\|126205_126877_-	Mediator of plasmid stability	NA	NA	NA	NA
AVE08744.1\|126879_127851_-	StbA family protein	A0A222YXF2	Escherichia_phage	1.1e-73	46.8
AVE08745.1\|128099_129584_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5
AVE08746.1\|129583_129835_-	hypothetical protein	NA	NA	NA	NA
AVE08747.1\|129993_130425_+	peptidase	A0A1W6JNS2	Morganella_phage	2.1e-29	53.3
AVE08748.1\|130424_131696_+	DNA polymerase V subunit UmuC	F1C5A5	Cronobacter_phage	7.5e-152	63.7
AVE08749.1\|131777_132755_-	ParB/RepB/Spo0J family partition protein	Q38420	Escherichia_phage	1.4e-86	53.8
AVE08750.1\|132751_133957_-	ParA family protein	A0A077SL49	Escherichia_phage	5.3e-163	69.3
AVE08751.1\|135066_135933_-	RepB family plasmid replication initiator protein	A0A222YYK1	Escherichia_phage	1.5e-23	31.1

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP026585

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. CP026584

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection