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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP015510 Wolbachia endosymbiont of Folsomia candida strain Berlin, complete genome 6 crisprs DEDDh,cas3,PD-DExK,RT 3 0 10 0

Results visualization

1. CP015510
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP015510_2 289863-289955 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP015510_3 532442-532549 Unclear NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP015510_6 807342-807451 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP015510_7 952272-952463 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP015510_10 1394819-1394943 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP015510_11 1530538-1530627 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CP015510_11 11.1|1530565|36|CP015510|CRISPRCasFinder 1530565-1530600 36 CP015510.2 89013-89048 0 1.0
CP015510_11 11.1|1530565|36|CP015510|CRISPRCasFinder 1530565-1530600 36 CP015510.2 211286-211321 0 1.0
CP015510_11 11.1|1530565|36|CP015510|CRISPRCasFinder 1530565-1530600 36 CP015510.2 240522-240557 0 1.0
CP015510_11 11.1|1530565|36|CP015510|CRISPRCasFinder 1530565-1530600 36 CP015510.2 340839-340874 0 1.0
CP015510_11 11.1|1530565|36|CP015510|CRISPRCasFinder 1530565-1530600 36 CP015510.2 814968-815003 0 1.0
CP015510_11 11.1|1530565|36|CP015510|CRISPRCasFinder 1530565-1530600 36 CP015510.2 1536217-1536252 0 1.0
CP015510_11 11.1|1530565|36|CP015510|CRISPRCasFinder 1530565-1530600 36 CP015510.2 1696489-1696524 0 1.0
CP015510_11 11.1|1530565|36|CP015510|CRISPRCasFinder 1530565-1530600 36 CP015510.2 1792611-1792646 0 1.0
CP015510_6 6.1|807374|46|CP015510|CRISPRCasFinder 807374-807419 46 CP015510.2 86087-86132 1 0.978
CP015510_6 6.1|807374|46|CP015510|CRISPRCasFinder 807374-807419 46 CP015510.2 240369-240414 1 0.978
CP015510_6 6.1|807374|46|CP015510|CRISPRCasFinder 807374-807419 46 CP015510.2 946329-946374 1 0.978
CP015510_6 6.1|807374|46|CP015510|CRISPRCasFinder 807374-807419 46 CP015510.2 1529119-1529164 1 0.978
CP015510_6 6.1|807374|46|CP015510|CRISPRCasFinder 807374-807419 46 CP015510.2 1719639-1719684 1 0.978
CP015510_7 7.2|952401|42|CP015510|PILER-CR 952401-952442 42 CP015510.2 891951-891992 1 0.976
CP015510_11 11.1|1530565|36|CP015510|CRISPRCasFinder 1530565-1530600 36 CP015510.2 805028-805063 1 0.972
CP015510_11 11.1|1530565|36|CP015510|CRISPRCasFinder 1530565-1530600 36 CP015510.2 1721008-1721043 1 0.972
CP015510_7 7.2|952401|42|CP015510|PILER-CR 952401-952442 42 CP015510.2 151451-151492 2 0.952
CP015510_7 7.2|952401|42|CP015510|PILER-CR 952401-952442 42 CP015510.2 189950-189991 2 0.952
CP015510_7 7.2|952401|42|CP015510|PILER-CR 952401-952442 42 CP015510.2 409488-409529 2 0.952
CP015510_7 7.2|952401|42|CP015510|PILER-CR 952401-952442 42 CP015510.2 912387-912428 2 0.952
CP015510_11 11.1|1530565|36|CP015510|CRISPRCasFinder 1530565-1530600 36 CP015510.2 946483-946518 2 0.944

1. spacer 11.1|1530565|36|CP015510|CRISPRCasFinder matches to position: 89013-89048, mismatch: 0, identity: 1.0

aaggcgtgtagtatttttgagctatgcaacaaagcc	CRISPR spacer
aaggcgtgtagtatttttgagctatgcaacaaagcc	Protospacer
************************************

2. spacer 11.1|1530565|36|CP015510|CRISPRCasFinder matches to position: 211286-211321, mismatch: 0, identity: 1.0

aaggcgtgtagtatttttgagctatgcaacaaagcc	CRISPR spacer
aaggcgtgtagtatttttgagctatgcaacaaagcc	Protospacer
************************************

3. spacer 11.1|1530565|36|CP015510|CRISPRCasFinder matches to position: 240522-240557, mismatch: 0, identity: 1.0

aaggcgtgtagtatttttgagctatgcaacaaagcc	CRISPR spacer
aaggcgtgtagtatttttgagctatgcaacaaagcc	Protospacer
************************************

4. spacer 11.1|1530565|36|CP015510|CRISPRCasFinder matches to position: 340839-340874, mismatch: 0, identity: 1.0

aaggcgtgtagtatttttgagctatgcaacaaagcc	CRISPR spacer
aaggcgtgtagtatttttgagctatgcaacaaagcc	Protospacer
************************************

5. spacer 11.1|1530565|36|CP015510|CRISPRCasFinder matches to position: 814968-815003, mismatch: 0, identity: 1.0

aaggcgtgtagtatttttgagctatgcaacaaagcc	CRISPR spacer
aaggcgtgtagtatttttgagctatgcaacaaagcc	Protospacer
************************************

6. spacer 11.1|1530565|36|CP015510|CRISPRCasFinder matches to position: 1536217-1536252, mismatch: 0, identity: 1.0

aaggcgtgtagtatttttgagctatgcaacaaagcc	CRISPR spacer
aaggcgtgtagtatttttgagctatgcaacaaagcc	Protospacer
************************************

7. spacer 11.1|1530565|36|CP015510|CRISPRCasFinder matches to position: 1696489-1696524, mismatch: 0, identity: 1.0

aaggcgtgtagtatttttgagctatgcaacaaagcc	CRISPR spacer
aaggcgtgtagtatttttgagctatgcaacaaagcc	Protospacer
************************************

8. spacer 11.1|1530565|36|CP015510|CRISPRCasFinder matches to position: 1792611-1792646, mismatch: 0, identity: 1.0

aaggcgtgtagtatttttgagctatgcaacaaagcc	CRISPR spacer
aaggcgtgtagtatttttgagctatgcaacaaagcc	Protospacer
************************************

9. spacer 6.1|807374|46|CP015510|CRISPRCasFinder matches to position: 86087-86132, mismatch: 1, identity: 0.978

gaaaaaagggaaagttttattaataatttcaaatctttgcatagcg	CRISPR spacer
gaaaaaagggaaagttttattaataatttcaaatctttgcgtagcg	Protospacer
****************************************.*****

10. spacer 6.1|807374|46|CP015510|CRISPRCasFinder matches to position: 240369-240414, mismatch: 1, identity: 0.978

gaaaaaagggaaagttttattaataatttcaaatctttgcatagcg	CRISPR spacer
gaaaaaagggaaagttttattaataatttcaaatctttgcgtagcg	Protospacer
****************************************.*****

11. spacer 6.1|807374|46|CP015510|CRISPRCasFinder matches to position: 946329-946374, mismatch: 1, identity: 0.978

gaaaaaagggaaagttttattaataatttcaaatctttgcatagcg	CRISPR spacer
gaaaaaagggaaagttttattaataatttcaaatctttgcgtagcg	Protospacer
****************************************.*****

12. spacer 6.1|807374|46|CP015510|CRISPRCasFinder matches to position: 1529119-1529164, mismatch: 1, identity: 0.978

gaaaaaagggaaagttttattaataatttcaaatctttgcatagcg	CRISPR spacer
gaaaaaagggaaagttttattaataatttcaaatctttgcgtagcg	Protospacer
****************************************.*****

13. spacer 6.1|807374|46|CP015510|CRISPRCasFinder matches to position: 1719639-1719684, mismatch: 1, identity: 0.978

gaaaaaagggaaagttttattaataatttcaaatctttgcatagcg	CRISPR spacer
gaaaaaagggaaagttttattaataatttcaaatctttgcgtagcg	Protospacer
****************************************.*****

14. spacer 7.2|952401|42|CP015510|PILER-CR matches to position: 891951-891992, mismatch: 1, identity: 0.976

gaaagcaaactaaaagcatcaacctttggtgtcattccagtg	CRISPR spacer
gaaagcaaactaaaaacatcaacctttggtgtcattccagtg	Protospacer
***************.**************************

15. spacer 11.1|1530565|36|CP015510|CRISPRCasFinder matches to position: 805028-805063, mismatch: 1, identity: 0.972

aaggcgtgtagtatttttgagctatgcaacaaagcc	CRISPR spacer
aaggcgtgtagtatttttgagcgatgcaacaaagcc	Protospacer
********************** *************

16. spacer 11.1|1530565|36|CP015510|CRISPRCasFinder matches to position: 1721008-1721043, mismatch: 1, identity: 0.972

aaggcgtgtagtatttttgagctatgcaacaaagcc	CRISPR spacer
aaggcgtgtagtatttttgagcgatgcaacaaagcc	Protospacer
********************** *************

17. spacer 7.2|952401|42|CP015510|PILER-CR matches to position: 151451-151492, mismatch: 2, identity: 0.952

gaaagcaaactaaaagcatcaacctttggtgtcattccagtg	CRISPR spacer
gaaagtaaactaaaaacatcaacctttggtgtcattccagtg	Protospacer
*****.*********.**************************

18. spacer 7.2|952401|42|CP015510|PILER-CR matches to position: 189950-189991, mismatch: 2, identity: 0.952

gaaagcaaactaaaagcatcaacctttggtgtcattccagtg	CRISPR spacer
gaaaagaaactaaaagcatcaacctttggtgtcattccagtg	Protospacer
****. ************************************

19. spacer 7.2|952401|42|CP015510|PILER-CR matches to position: 409488-409529, mismatch: 2, identity: 0.952

gaaagcaaactaaaagcatcaacctttggtgtcattccagtg	CRISPR spacer
gaaagcaaactaaaaacatcaacctttggtgtcatcccagtg	Protospacer
***************.*******************.******

20. spacer 7.2|952401|42|CP015510|PILER-CR matches to position: 912387-912428, mismatch: 2, identity: 0.952

gaaagcaaactaaaagcatcaacctttggtgtcattccagtg	CRISPR spacer
gaaagtaaactaaaaacatcaacctttggtgtcattccagtg	Protospacer
*****.*********.**************************

21. spacer 11.1|1530565|36|CP015510|CRISPRCasFinder matches to position: 946483-946518, mismatch: 2, identity: 0.944

aaggcgtgtagtatttttgagctatgcaacaaagcc	CRISPR spacer
aaggcgtgtagtgtttttgagcgatgcaacaaagcc	Protospacer
************.********* *************

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 75679 : 132525 41 Wolbachia_phage(20.0%) protease,transposase NA
DBSCAN-SWA_2 184044 : 307311 104 Wolbachia_phage(13.33%) tRNA,transposase,capsid NA
DBSCAN-SWA_3 314534 : 326514 12 Wolbachia_phage(75.0%) NA NA
DBSCAN-SWA_4 338806 : 451121 81 Wolbachia_phage(71.88%) protease,transposase,tail NA
DBSCAN-SWA_5 605952 : 794170 173 Wolbachia_phage(74.44%) tRNA,head,capsid,transposase,plate,terminase,portal,tail NA
DBSCAN-SWA_6 805471 : 854199 41 uncultured_Mediterranean_phage(14.29%) tail,tRNA,transposase,head NA
DBSCAN-SWA_7 866082 : 945552 58 Wolbachia_phage(21.05%) protease,tRNA,transposase,head NA
DBSCAN-SWA_8 1013163 : 1209091 172 Wolbachia_phage(75.0%) tRNA,capsid,head,protease,transposase,plate,terminase,portal,tail NA
DBSCAN-SWA_9 1226516 : 1291229 44 Wolbachia_phage(67.74%) terminase,tail,transposase,plate NA
DBSCAN-SWA_10 1368398 : 1429283 60 uncultured_Mediterranean_phage(30.0%) protease,transposase,tRNA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage