CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Prophage number
CP020442	Paracoccus yeei strain FDAARGOS_252 chromosome, complete genome	0 crisprs	csa3,cas3,cas3HD,DEDDh,WYL	12
CP020443	Paracoccus yeei strain FDAARGOS_252 plasmid unnamed3, complete sequence	0 crisprs	NA	0
CP020445	Paracoccus yeei strain FDAARGOS_252 plasmid unnamed5, complete sequence	0 crisprs	NA	0
CP020446	Paracoccus yeei strain FDAARGOS_252 plasmid unnamed6, complete sequence	0 crisprs	NA	1
CP020444	Paracoccus yeei strain FDAARGOS_252 plasmid unnamed4, complete sequence	0 crisprs	NA	2
CP020441	Paracoccus yeei strain FDAARGOS_252 plasmid unnamed1, complete sequence	0 crisprs	DEDDh	1
CP020440	Paracoccus yeei strain FDAARGOS_252 plasmid unnamed2, complete sequence	0 crisprs	NA	0
CP020447	Paracoccus yeei strain FDAARGOS_252 plasmid unnamed7, complete sequence	0 crisprs	PrimPol	1

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

10958 : 20857

Enterobacteria_phage(57.14%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
ARC39080.1\|10958_14897_+	hypothetical protein	I7HJE4	Enterobacteria_phage	2.3e-10	27.4
ARC39081.1\|15103_15664_+	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	3.4e-40	48.9
ARC39082.1\|15660_16701_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	7.4e-97	52.9
ARC39083.1\|16697_17459_+	NAD(P)-dependent oxidoreductase	A0A291LA50	Escherichia_phage	3.3e-22	33.2
ARC39084.1\|17455_18334_+	glucose-1-phosphate thymidylyltransferase	I7I009	Enterobacteria_phage	2.5e-93	55.7
ARC39085.1\|18447_19617_-	nucleotide sugar dehydrogenase	M1HIV9	Acanthocystis_turfacea_Chlorella_virus	8.8e-107	53.9
ARC39086.1\|19988_20249_-	CopG family transcriptional regulator	NA	NA	NA	NA
ARC39087.1\|20248_20857_-	ParA family protein	K7R2R7	Vibrio_phage	1.9e-15	34.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. CP020444

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

16968 : 59231

Enterobacteria_phage(20.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
ARC38792.1\|16968_17802_-\|transposase	IS5/IS1182 family transposase	NA	NA	NA	NA
ARC38793.1\|18138_18582_-	PIN domain-containing protein	NA	NA	NA	NA
ARC38794.1\|18578_18839_-	antitoxin	NA	NA	NA	NA
ARC38795.1\|19848_21126_-	cytochrome P450	S4VQU1	Pandoravirus	8.1e-05	24.2
ARC38796.1\|21125_21635_-	signal peptidase II	NA	NA	NA	NA
ARC38930.1\|21631_22459_-	cation transporter	NA	NA	NA	NA
ARC38797.1\|22569_23052_+	MerR family DNA-binding transcriptional regulator	NA	NA	NA	NA
ARC38798.1\|23011_23785_-	hypothetical protein	NA	NA	NA	NA
ARC38799.1\|24264_24537_+	hypothetical protein	NA	NA	NA	NA
ARC38800.1\|24537_26139_-	VPLPA-CTERM-specific exosortase XrtD	NA	NA	NA	NA
ARC38801.1\|26327_27017_+	transporter	NA	NA	NA	NA
ARC38802.1\|27050_28001_+	cation transporter	NA	NA	NA	NA
ARC38803.1\|28022_28580_+	DUF1295 domain-containing protein	NA	NA	NA	NA
ARC38804.1\|29343_30009_+	L,D-transpeptidase	NA	NA	NA	NA
ARC38805.1\|30541_31201_+	hypothetical protein	NA	NA	NA	NA
ARC38806.1\|31306_31831_-	hypothetical protein	NA	NA	NA	NA
ARC38807.1\|31864_32329_-	DUF411 domain-containing protein	NA	NA	NA	NA
ARC38808.1\|32325_32940_-	SCO family protein	NA	NA	NA	NA
ARC38809.1\|32921_33398_-	copper chaperone PCu(A)C	NA	NA	NA	NA
AVI58418.1\|33394_33982_-	electron transport protein SCO1/SenC	NA	NA	NA	NA
ARC38810.1\|33994_34657_-	disulfide bond formation protein DsbA	NA	NA	NA	NA
ARC38931.1\|34653_35085_-	disulfide bond formation protein B	NA	NA	NA	NA
ARC38811.1\|35163_36345_-	M23 family peptidase	A0A292GJG6	Xanthomonas_phage	7.5e-21	43.3
ARC38812.1\|36854_37289_-	MerR family DNA-binding transcriptional regulator	NA	NA	NA	NA
ARC38813.1\|37375_39634_+	cadmium-translocating P-type ATPase	E4ZFI9	Streptococcus_phage	5.9e-123	41.8
ARC38814.1\|39638_40262_+	isoprenylcysteine carboxylmethyltransferase family protein	NA	NA	NA	NA
ARC38815.1\|40258_40735_+	signal peptidase II	NA	NA	NA	NA
ARC38816.1\|40780_41233_-	transcriptional regulator MntR	NA	NA	NA	NA
ARC38817.1\|41331_42654_+	divalent metal cation transporter	NA	NA	NA	NA
ARC38818.1\|42819_43905_-	DUF475 domain-containing protein	K4JUR1	Caulobacter_phage	2.1e-62	40.1
ARC38819.1\|44234_44528_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
ARC38820.1\|44515_44797_-	ribbon-helix-helix protein, CopG family	NA	NA	NA	NA
ARC38932.1\|45225_46659_-\|transposase	IS1182 family transposase	NA	NA	NA	NA
ARC38933.2\|46886_47345_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
ARC38821.1\|47344_47698_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
ARC38822.1\|47766_49332_+\|transposase	IS66 family transposase	S5VTD3	Leptospira_phage	6.0e-58	31.4
ARC38823.1\|49519_49993_+	molecular chaperone Hsp20	A0A2L0V0Y9	Agrobacterium_phage	2.4e-18	45.6
ARC38824.1\|50084_50591_+	Hsp20/alpha crystallin family protein	A0A1B2LRT2	Wolbachia_phage	5.3e-16	37.7
ARC38825.1\|51061_51634_+	recombinase family protein	A0A0A7NPV4	Enterobacteria_phage	1.6e-40	49.2
ARC38826.1\|51691_52276_-	hypothetical protein	NA	NA	NA	NA
ARC38934.1\|52256_53582_-	nucleotidyltransferase	NA	NA	NA	NA
ARC38827.1\|54059_54638_+	recombinase family protein	A0A0A7NPV4	Enterobacteria_phage	1.0e-26	39.2
ARC38828.1\|54637_54946_+	hypothetical protein	V5YUP3	Pseudomonas_phage	2.4e-11	54.8
ARC38829.1\|55041_56172_+\|transposase	IS110 family transposase	NA	NA	NA	NA
ARC38830.1\|56533_57715_+\|transposase	IS5/IS1182 family transposase	NA	NA	NA	NA
ARC38831.1\|58100_59231_-\|transposase	IS110 family transposase	NA	NA	NA	NA

DBSCAN-SWA_2

72728 : 135750

Ochrobactrum_phage(14.29%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
ARC38841.1\|72728_73757_+\|transposase	IS110 family transposase	NA	NA	NA	NA
ARC38842.1\|73992_75033_+\|transposase	IS110 family transposase	NA	NA	NA	NA
ARC38843.1\|75420_76353_-\|transposase	IS5/IS1182 family transposase	A0A1V0E8E1	Vibrio_phage	2.6e-53	37.9
ARC38844.1\|76750_77791_-\|transposase	IS110 family transposase	NA	NA	NA	NA
ARC38845.1\|78026_79055_-\|transposase	IS110 family transposase	NA	NA	NA	NA
ARC38846.2\|79821_80667_+	hypothetical protein	NA	NA	NA	NA
ARC38847.1\|80932_82804_+	hypothetical protein	G8DH78	Emiliania_huxleyi_virus	8.1e-86	36.9
ARC38848.1\|82880_83087_+	hypothetical protein	NA	NA	NA	NA
ARC38849.1\|83257_83854_-	thermonuclease family protein	A0A0R6PHV6	Moraxella_phage	7.7e-06	33.3
ARC38850.1\|83871_84312_-	PIN domain-containing protein	NA	NA	NA	NA
AVI58419.1\|84296_84551_-	histidinol dehydrogenase	NA	NA	NA	NA
ARC38852.1\|84732_84915_+	DUF3606 domain-containing protein	NA	NA	NA	NA
ARC38853.1\|84919_85177_+	DUF982 domain-containing protein	NA	NA	NA	NA
ARC38854.1\|85968_86910_+\|transposase	IS110 family transposase	A0A1S7J231	Thermus_phage	1.5e-16	30.5
ARC38855.1\|87449_89129_+	hypothetical protein	NA	NA	NA	NA
ARC38856.1\|89460_89880_-	hypothetical protein	Q6J1X2	Lactobacillus_phage	1.4e-17	40.4
ARC38935.1\|91269_92301_+\|transposase	IS110 family transposase	NA	NA	NA	NA
ARC38857.1\|93349_93709_-	hypothetical protein	NA	NA	NA	NA
ARC38858.1\|93721_94273_+	cysteine hydrolase	NA	NA	NA	NA
ARC38859.2\|94834_95290_+	hypothetical protein	NA	NA	NA	NA
ARC38860.1\|95403_96639_-	hypothetical protein	NA	NA	NA	NA
ARC38861.1\|96877_97759_+	recombinase family protein	A0A0C4UR34	Shigella_phage	1.1e-32	55.4
ARC38862.1\|98125_99325_+	plasmid partitioning protein RepA	A0A240F4U1	Ochrobactrum_phage	2.5e-88	47.4
ARC38863.1\|99309_100293_+	plasmid partitioning protein RepB	A0A240F4U0	Ochrobactrum_phage	5.5e-25	26.8
ARC38864.1\|100533_101589_+	replication initiator RepC	NA	NA	NA	NA
AVI58420.1\|103335_105978_-	hypothetical protein	NA	NA	NA	NA
ARC38867.1\|106114_107851_-	sorbosone dehydrogenase	A0A1V0SI18	Klosneuvirus	6.4e-45	27.9
ARC38868.2\|107850_109011_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
ARC38869.1\|109083_110019_-	ABC transporter permease	NA	NA	NA	NA
ARC38870.1\|110015_111014_-	ABC transporter permease	NA	NA	NA	NA
ARC38871.1\|111010_112537_-	sugar ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.7e-12	31.4
ARC38872.1\|112636_113998_-	NAD-dependent succinate-semialdehyde dehydrogenase	NA	NA	NA	NA
ARC38873.2\|114245_116168_+	hypothetical protein	NA	NA	NA	NA
AVI58421.1\|116151_116796_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
ARC38874.1\|116887_118204_-	glycerate kinase	NA	NA	NA	NA
ARC38936.2\|118194_119064_-	endonuclease	NA	NA	NA	NA
ARC38875.2\|119065_120211_-	dihydrodipicolinate synthase family protein	NA	NA	NA	NA
ARC38876.1\|120237_121398_-	gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
AVI58422.1\|121677_122803_+\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	9.6e-34	35.6
ARC38877.1\|122698_123493_+	LuxR family transcriptional regulator	NA	NA	NA	NA
ARC38878.2\|123965_124313_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
ARC38879.1\|124735_126325_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	1.8e-73	34.2
ARC38880.1\|126373_126694_+	recombinase family protein	E5FFF9	Burkholderia_phage	4.8e-15	48.2
ARC38881.1\|126744_127536_+	AraC family transcriptional regulator	NA	NA	NA	NA
ARC38882.1\|127889_128537_-	flavin-nucleotide-binding protein	NA	NA	NA	NA
ARC38883.2\|128529_128961_-	RidA family protein	NA	NA	NA	NA
ARC38884.1\|129016_130327_-	C4-dicarboxylate ABC transporter permease	NA	NA	NA	NA
ARC38885.1\|130339_130942_-	TRAP transporter small permease	NA	NA	NA	NA
ARC38886.1\|130938_131946_-	C4-dicarboxylate ABC transporter substrate-binding protein	NA	NA	NA	NA
ARC38887.1\|132044_132938_-	alpha/beta hydrolase	A0A088FQA2	Mycobacterium_phage	2.0e-10	27.3
ARC38937.1\|134718_135750_+\|transposase	IS110 family transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. CP020442

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

12030 : 130351

110

uncultured_virus(12.5%)

integrase,protease,head,capsid,portal,transposase,terminase

attL 22903:22920|attR 130474:130491

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
ARC35401.1\|12030_13575_-\|protease	DegQ family serine endoprotease	A0A1B1IT49	uncultured_Mediterranean_phage	5.9e-26	29.2
ARC35402.1\|13786_14377_+	DsbA family protein	NA	NA	NA	NA
ARC35403.1\|14373_15606_-	tryptophan synthase subunit beta	NA	NA	NA	NA
ARC35404.1\|15697_16345_-	phosphoribosylanthranilate isomerase	NA	NA	NA	NA
ARC35405.1\|16344_16728_-	DUF1049 domain-containing protein	NA	NA	NA	NA
ARC35406.1\|16762_17050_-	integration host factor subunit beta	A3E2K9	Sodalis_phage	7.1e-10	39.8
ARC35407.1\|17235_18915_-	30S ribosomal protein S1	NA	NA	NA	NA
ARC35408.1\|19143_19740_-	(d)CMP kinase	NA	NA	NA	NA
ARC35409.1\|19896_20820_+	histidine kinase	NA	NA	NA	NA
ARC35410.1\|20898_21810_-	elongation factor Ts	NA	NA	NA	NA
ARC35411.1\|21912_22692_-	30S ribosomal protein S2	NA	NA	NA	NA
22903:22920	attL	NA	NA	NA	NA
ARC35412.1\|23312_24146_+\|transposase	IS5/IS1182 family transposase	NA	NA	NA	NA
ARC35413.1\|24166_25468_-	MFS transporter	NA	NA	NA	NA
ARC35414.1\|25724_27194_+	MATE family efflux transporter	NA	NA	NA	NA
AVI58263.1\|27250_28498_+	hsp70 family protein	NA	NA	NA	NA
ARC35415.1\|28479_29127_-	TenA family transcriptional regulator	NA	NA	NA	NA
ARC35416.1\|29441_30614_+	AI-2E family transporter	NA	NA	NA	NA
ARC35417.1\|30768_34095_+	IMP dehydrogenase	NA	NA	NA	NA
ARC35418.1\|34103_36509_+	hypothetical protein	NA	NA	NA	NA
ARC38389.1\|36520_37492_+	transglutaminase family protein	NA	NA	NA	NA
ARC35419.1\|37700_38900_-\|transposase	IS701 family transposase	NA	NA	NA	NA
ARC35420.1\|38967_40065_-\|protease	protease modulator HflC	NA	NA	NA	NA
AVI58264.1\|40064_41270_-\|protease	FtsH protease activity modulator HflK	NA	NA	NA	NA
ARC35421.1\|41338_42739_-	glutathione-disulfide reductase	NA	NA	NA	NA
ARC35422.1\|42735_43458_-	ribose-5-phosphate isomerase RpiA	NA	NA	NA	NA
ARC35423.1\|43595_44738_+	bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	NA	NA	NA	NA
ARC35424.1\|44739_45237_+	phosphatidylglycerophosphatase A	NA	NA	NA	NA
ARC35425.1\|45233_45704_+	CinA family protein	NA	NA	NA	NA
ARC35426.1\|45700_46732_-	low specificity L-threonine aldolase	NA	NA	NA	NA
ARC38390.1\|46728_47169_-	YcgN family cysteine cluster protein	NA	NA	NA	NA
ARC35427.1\|47168_48098_-	bifunctional riboflavin kinase/FAD synthetase	NA	NA	NA	NA
ARC38391.1\|48130_48574_-	(R)-hydratase	NA	NA	NA	NA
ARC35428.1\|48673_49543_-	TIGR01459 family HAD-type hydrolase	NA	NA	NA	NA
ARC35429.1\|49559_50480_-	manganese-dependent inorganic pyrophosphatase	NA	NA	NA	NA
ARC35430.1\|50544_51189_-	DUF1345 domain-containing protein	NA	NA	NA	NA
ARC35431.1\|51229_51574_-	nuclear transport factor 2 family protein	NA	NA	NA	NA
ARC35432.1\|51563_52619_-	TraB/GumN family protein	NA	NA	NA	NA
ARC35433.1\|52668_53985_-	glycosyl transferase family 1	NA	NA	NA	NA
ARC35434.1\|54172_54460_+	co-chaperone GroES	A0A221S4G8	uncultured_virus	2.2e-19	52.2
ARC35435.1\|54498_56136_+	chaperonin GroEL	A0A240F779	uncultured_virus	5.3e-174	60.3
ARC35436.1\|56241_59712_-	DNA polymerase III subunit alpha	R4TPF1	Streptomyces_phage	2.3e-166	34.6
ARC35437.1\|59670_61305_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	7.7e-16	28.5
ARC35438.1\|61291_62365_+	ABC transporter permease	NA	NA	NA	NA
ARC35439.1\|62361_63249_+	ABC transporter permease	NA	NA	NA	NA
ARC35440.1\|63269_64346_+	BMP family ABC transporter substrate-binding protein	NA	NA	NA	NA
ARC35441.1\|64407_64881_-	DNA starvation/stationary phase protection protein Dps	NA	NA	NA	NA
ARC35442.1\|65023_65257_-	acyl carrier protein	A0A2I7RIC8	Vibrio_phage	3.9e-06	40.8
ARC35443.1\|65394_66132_-	3-oxoacyl-[acyl-carrier-protein] reductase	NA	NA	NA	NA
ARC35444.1\|66195_67122_-	[acyl-carrier-protein] S-malonyltransferase	NA	NA	NA	NA
AVI58265.1\|67194_68538_-	two-component sensor histidine kinase	NA	NA	NA	NA
ARC35445.2\|68583_69450_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
ARC35446.2\|70466_70967_-	hypothetical protein	NA	NA	NA	NA
ARC35447.1\|70972_72043_-\|portal	phage portal protein	NA	NA	NA	NA
ARC35448.1\|72042_72612_-\|head,protease	HK97 family phage prohead protease	NA	NA	NA	NA
ARC35449.1\|72611_73847_-\|capsid	phage major capsid protein	NA	NA	NA	NA
ARC35450.1\|73849_74194_-	endonuclease	NA	NA	NA	NA
ARC38392.1\|74184_75651_-\|terminase	terminase	NA	NA	NA	NA
ARC35451.1\|75860_76424_-	hypothetical protein	NA	NA	NA	NA
ARC35452.1\|76737_77508_-	hypothetical protein	NA	NA	NA	NA
ARC35453.1\|77595_78621_+	DNA-binding protein	NA	NA	NA	NA
ARC35454.1\|78997_79636_+	GntR family transcriptional regulator	NA	NA	NA	NA
ARC35455.1\|79734_80286_+	biotin transporter BioY	NA	NA	NA	NA
ARC35456.1\|80282_81263_+	biotin synthase BioB	NA	NA	NA	NA
ARC35457.1\|81613_82993_-	hypothetical protein	NA	NA	NA	NA
ARC35458.1\|83072_83549_-	hypothetical protein	NA	NA	NA	NA
ARC35459.1\|83597_83903_-	hypothetical protein	NA	NA	NA	NA
ARC35460.1\|83991_84234_+	XRE family transcriptional regulator	NA	NA	NA	NA
ARC35461.1\|85201_85402_+	hypothetical protein	NA	NA	NA	NA
ARC35462.1\|86032_86488_-	MOSC domain-containing protein	NA	NA	NA	NA
ARC35463.1\|87925_88489_+	hypothetical protein	NA	NA	NA	NA
ARC35465.1\|89713_91777_+	AAA family ATPase	E5EQ50	Micromonas_sp._RCC1109_virus	8.8e-25	31.4
AVI58266.1\|91691_91877_-	hypothetical protein	NA	NA	NA	NA
ARC35466.1\|92796_93225_-	PIN domain-containing protein	NA	NA	NA	NA
ARC35467.1\|93228_93480_-	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA
ARC35468.1\|95126_96296_-	sodium:proton exchanger	NA	NA	NA	NA
ARC35469.1\|96344_96767_-	thioredoxin TrxC	V5L6J2	Insectomime_virus	3.6e-10	32.4
ARC35470.1\|96818_97661_-	hypothetical protein	A0A1V0SAV4	Catovirus	5.5e-10	26.9
ARC35471.1\|97651_98401_-\|protease	rhomboid family intramembrane serine protease	NA	NA	NA	NA
ARC35472.1\|98434_98995_-	ETC complex I subunit	NA	NA	NA	NA
ARC35473.1\|98996_99617_-	hypothetical protein	NA	NA	NA	NA
ARC38393.1\|99616_99817_-	hypothetical protein	NA	NA	NA	NA
ARC35474.1\|99825_100473_-	HdeD family acid-resistance protein	NA	NA	NA	NA
ARC35475.1\|100469_101642_-	flagellar biosynthesis protein FliA	NA	NA	NA	NA
ARC35476.1\|101719_104614_-\|protease	ATP-dependent Clp protease ATP-binding subunit	K4FB40	Cronobacter_phage	6.8e-124	40.3
ARC35477.1\|104678_106511_-	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	M4QMW8	Micromonas_pusilla_virus	9.0e-106	43.8
ARC35478.1\|107162_107591_+	Hsp20/alpha crystallin family protein	NA	NA	NA	NA
ARC35479.1\|107605_108004_+	Hsp20/alpha crystallin family protein	NA	NA	NA	NA
ARC35480.1\|108024_108516_+	Hsp20/alpha crystallin family protein	NA	NA	NA	NA
ARC38394.1\|108630_109116_+	protein PsiE	NA	NA	NA	NA
ARC35481.1\|109162_109507_+	hypothetical protein	NA	NA	NA	NA
ARC38395.1\|110030_110330_+	nucleotidyltransferase	NA	NA	NA	NA
ARC38396.1\|110365_110668_+	DUF86 domain-containing protein	NA	NA	NA	NA
ARC35482.1\|111082_111847_-	ATP-binding protein	A0A059NT77	Lactococcus_phage	2.6e-43	40.1
ARC35483.1\|112113_113190_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
ARC35484.1\|113375_114080_+	FadR family transcriptional regulator	NA	NA	NA	NA
ARC35485.2\|114167_115487_-	MFS transporter	Q6JIH2	Burkholderia_virus	4.5e-67	36.0
ARC35486.1\|115627_116860_-	creatininase	NA	NA	NA	NA
ARC35487.1\|116965_117865_+	LysR family transcriptional regulator	NA	NA	NA	NA
ARC35488.1\|118404_118587_+	hypothetical protein	NA	NA	NA	NA
ARC35489.1\|118932_120432_-	nitrate reductase	NA	NA	NA	NA
ARC35490.1\|120539_122321_-	hydantoinase B/oxoprolinase family protein	NA	NA	NA	NA
ARC35491.1\|122322_124398_-	hydantoinase/oxoprolinase family protein	NA	NA	NA	NA
ARC35492.1\|124487_125210_-	N-carbamoylsarcosine amidase	NA	NA	NA	NA
ARC35493.1\|125383_126280_+	LysR family transcriptional regulator	A0A2P0ZL89	Lactobacillus_phage	6.5e-09	23.8
ARC35495.1\|126888_127188_+	hypothetical protein	NA	NA	NA	NA
ARC35496.1\|127180_127567_+	hypothetical protein	NA	NA	NA	NA
ARC35497.1\|127559_128597_+	hypothetical protein	NA	NA	NA	NA
ARC35498.1\|128593_128842_+	hypothetical protein	NA	NA	NA	NA
ARC35499.1\|128838_129093_+	hypothetical protein	NA	NA	NA	NA
ARC35500.2\|129340_130351_+\|integrase	integrase	H2BDD9	Pseudomonas_virus	7.3e-17	32.6
130474:130491	attR	NA	NA	NA	NA

DBSCAN-SWA_2

165194 : 174123

Cronobacter_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
ARC38400.1\|165194_165662_+	ATP-binding protein	K4FBE0	Cronobacter_phage	7.8e-06	28.8
ARC35525.1\|165763_166717_+	DUF1738 domain-containing protein	A0A1B1IWW8	uncultured_Mediterranean_phage	3.2e-38	34.8
ARC38401.1\|166716_167664_+	hypothetical protein	A0A0S2SXP3	Bacillus_phage	1.3e-60	45.0
ARC35526.1\|167819_168206_+	hypothetical protein	NA	NA	NA	NA
ARC38402.1\|168343_170497_+	chromosome partitioning protein ParB	G8DH78	Emiliania_huxleyi_virus	2.0e-27	28.9
ARC35527.1\|170591_170921_+	hypothetical protein	NA	NA	NA	NA
ARC35528.1\|170917_171217_+	hypothetical protein	NA	NA	NA	NA
ARC35529.1\|171205_171403_-	hypothetical protein	NA	NA	NA	NA
AVI58271.1\|171608_171809_+	hypothetical protein	NA	NA	NA	NA
ARC35530.1\|171984_172353_+	thermonuclease family protein	F2Y1F1	Organic_Lake_phycodnavirus	1.8e-05	28.2
ARC35531.1\|172451_173009_+	hypothetical protein	NA	NA	NA	NA
ARC35532.1\|173069_173486_+	hypothetical protein	NA	NA	NA	NA
ARC35533.1\|173478_174123_+	antitoxin of toxin-antitoxin stability system	A0A2I6PI07	Pseudomonas_phage	1.7e-35	38.4

DBSCAN-SWA_3

511389 : 522761

Rhodobacter_phage(25.0%)

head,tail,protease,capsid

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
ARC35824.1\|511389_512103_-	DUF2793 domain-containing protein	A0A0K1Y6G9	Rhodobacter_phage	8.8e-17	40.0
AVI58281.1\|512095_515989_-	host specificity protein	A0A0K1Y6G6	Rhodobacter_phage	3.3e-222	38.8
ARC35825.1\|516004_516433_-	peptidase	A0A1V0DYB6	Dinoroseobacter_phage	1.5e-32	53.3
ARC35826.1\|516429_517251_-	DUF2163 domain-containing protein	A0A0K0PVK1	Roseobacter_phage	2.3e-45	37.8
ARC35827.1\|517247_517880_-	TIGR02217 family protein	A0A0B5A2K3	Paracoccus_phage	5.5e-55	48.8
ARC35828.1\|517886_518555_-\|tail	phage tail protein	C0LP53	Escherichia_virus	2.8e-09	37.3
ARC35829.1\|518577_518799_-\|tail	phage tail assembly chaperone	NA	NA	NA	NA
ARC35830.1\|518795_519113_-	gene transfer agent family protein	NA	NA	NA	NA
ARC35831.1\|519114_519528_-\|tail	phage major tail protein, TP901-1 family	NA	NA	NA	NA
ARC35832.1\|519539_519959_-	DUF3168 domain-containing protein	NA	NA	NA	NA
ARC35833.1\|519955_520306_-\|head,tail	head-tail adaptor protein	NA	NA	NA	NA
ARC38423.1\|521056_522223_-\|capsid	phage major capsid protein	B0VK33	Azospirillum_phage	2.1e-60	41.3
ARC35834.2\|522245_522761_-\|head,protease	HK97 family phage prohead protease	A0A0U2BX10	Paracoccus_phage	9.2e-32	49.1

DBSCAN-SWA_4

609747 : 727127

103

Paracoccus_phage(11.11%)

tail,protease,head,capsid,tRNA,portal,transposase,terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
ARC38432.1\|609747_611493_-\|tRNA	arginine--tRNA ligase	NA	NA	NA	NA
ARC35906.1\|611784_613905_+	ATP-dependent helicase	A0A0N9Q9J4	Chrysochromulina_ericina_virus	8.7e-52	34.5
ARC35907.1\|613914_615456_+	apolipoprotein N-acyltransferase	NA	NA	NA	NA
ARC35908.1\|615524_616691_+	methionine adenosyltransferase	A0A2H4PQS6	Staphylococcus_phage	2.4e-96	48.8
ARC35909.1\|616841_617468_-	molecular chaperone DnaJ	NA	NA	NA	NA
ARC35910.1\|617536_617788_+	BolA family transcriptional regulator	NA	NA	NA	NA
ARC35911.1\|617866_618832_+	fructose-bisphosphatase class II	NA	NA	NA	NA
ARC35912.1\|618879_620619_+	single-stranded-DNA-specific exonuclease RecJ	NA	NA	NA	NA
ARC35913.1\|621070_621595_-	N-acetyltransferase	NA	NA	NA	NA
ARC35914.2\|621599_622814_-	multidrug MFS transporter	NA	NA	NA	NA
ARC35915.1\|622914_623337_+	DUF1489 domain-containing protein	NA	NA	NA	NA
ARC35916.1\|623631_625002_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
AVI58284.1\|625036_628162_+	hydrophobe/amphiphile efflux-1 family RND transporter	NA	NA	NA	NA
ARC35917.1\|628323_629628_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
ARC35918.1\|629630_629891_+	hypothetical protein	NA	NA	NA	NA
AVI58285.1\|629880_632559_+	sodium:solute symporter	W8CYF6	Bacillus_phage	1.2e-18	27.3
ARC35919.1\|632619_633714_+	flagellar motor switch protein FliM	NA	NA	NA	NA
ARC35920.1\|633894_634113_+	translation initiation factor IF-1	NA	NA	NA	NA
ARC35921.1\|634164_634797_+	septum formation inhibitor Maf	NA	NA	NA	NA
AVI58286.1\|634793_635849_+	ribonuclease G	NA	NA	NA	NA
ARC35922.1\|635845_635995_+	DNA gyrase inhibitor YacG	NA	NA	NA	NA
ARC35923.1\|636565_636901_-	hypothetical protein	NA	NA	NA	NA
ARC35924.1\|636897_638406_-	hypothetical protein	NA	NA	NA	NA
ARC35925.1\|638405_638642_-	hypothetical protein	NA	NA	NA	NA
ARC35926.1\|638662_639244_-	hypothetical protein	NA	NA	NA	NA
ARC35927.1\|639240_641256_-	hypothetical protein	L7TND7	Rhizobium_phage	4.7e-31	40.6
ARC35928.1\|641475_642660_+\|transposase	IS110 family transposase	NA	NA	NA	NA
ARC35929.2\|642602_646943_-	hypothetical protein	G8DH58	Emiliania_huxleyi_virus	1.2e-119	42.1
AVI58287.1\|646944_647190_+	hypothetical protein	NA	NA	NA	NA
ARC35930.1\|647176_647596_-	hypothetical protein	A0A0U2C0Z1	Paracoccus_phage	1.0e-28	52.2
ARC35931.1\|647583_648180_-	hypothetical protein	A0A0U2C133	Paracoccus_phage	4.3e-33	40.6
ARC35932.1\|648185_648842_-	hypothetical protein	G8DH55	Emiliania_huxleyi_virus	1.9e-37	37.4
ARC35933.1\|648843_649374_-	hypothetical protein	A0A1B0T6I6	Pelagibaca_phage	8.3e-12	48.2
ARC35934.1\|649545_651045_+\|transposase	IS21 family transposase	NA	NA	NA	NA
ARC35935.1\|651550_652174_+	hypothetical protein	NA	NA	NA	NA
ARC35936.1\|652179_652767_+	tunicamycin resistance protein	NA	NA	NA	NA
ARC35937.1\|652918_654298_-	peroxidase	NA	NA	NA	NA
ARC35938.2\|654297_654966_-	hypothetical protein	NA	NA	NA	NA
AVI58399.1\|655083_656142_-	catalase	NA	NA	NA	NA
ARC38434.1\|656582_657578_+	secretion protein HylD	NA	NA	NA	NA
ARC35939.1\|657574_658762_+	ABC transporter permease	NA	NA	NA	NA
ARC35940.1\|658758_659931_+	ABC transporter permease	NA	NA	NA	NA
ARC35941.1\|660324_660645_-\|head,tail	head-tail adaptor protein	NA	NA	NA	NA
ARC35942.1\|660647_661175_-	hypothetical protein	NA	NA	NA	NA
ARC35943.1\|661174_661492_-	hypothetical protein	NA	NA	NA	NA
ARC35944.1\|661536_662778_-\|capsid	phage major capsid protein	Q3HQT0	Burkholderia_phage	5.9e-125	56.1
ARC35945.1\|662789_663623_-\|protease	Clp protease ClpP	A0A141GEW1	Brucella_phage	2.0e-73	59.1
ARC35946.1\|663807_664197_+	hypothetical protein	NA	NA	NA	NA
ARC35947.1\|664186_665533_-\|portal	phage portal protein	A0A2D1GNU4	Pseudomonas_phage	2.2e-69	40.9
ARC35948.1\|665609_666062_+	hypothetical protein	NA	NA	NA	NA
ARC35949.1\|666062_667835_-\|terminase	terminase large subunit	A0A2K5B285	Erysipelothrix_phage	7.6e-118	42.2
ARC35950.1\|667818_668289_-\|terminase	phage terminase small subunit P27 family	M1PSN0	Streptococcus_phage	3.8e-16	33.6
ARC35951.1\|669216_670563_+\|transposase	IS5/IS1182 family transposase	K4ICS3	Acidithiobacillus_phage	1.1e-52	46.9
ARC35952.1\|671047_671254_-	hypothetical protein	K4I1E3	Acidithiobacillus_phage	5.3e-15	61.8
ARC35954.2\|673398_674451_-\|transposase	IS110 family transposase	NA	NA	NA	NA
ARC35955.1\|675957_676539_-	polyhydroxyalkanoate synthesis repressor PhaR	NA	NA	NA	NA
ARC35956.1\|676688_677153_-	Phasin	NA	NA	NA	NA
ARC35957.2\|677273_679007_-	class I poly(R)-hydroxyalkanoic acid synthase	NA	NA	NA	NA
ARC38436.1\|679712_681041_+	polyhydroxyalkanoate depolymerase	NA	NA	NA	NA
ARC35958.1\|681065_681806_-	alpha/beta hydrolase	NA	NA	NA	NA
ARC35959.1\|681971_683918_+\|tRNA	threonine--tRNA ligase	A0A2K9L6B6	Tupanvirus	3.1e-120	36.6
ARC35960.1\|684152_684359_+	cold-shock protein	A0A1W6JNX5	Morganella_phage	3.0e-10	45.9
ARC35961.1\|684516_685968_+	long-chain fatty acid--CoA ligase	A0A2K9L3I8	Tupanvirus	7.1e-13	23.3
ARC35962.1\|685969_686620_+	DsbA family oxidoreductase	NA	NA	NA	NA
ARC35963.1\|686663_687866_-	colanic acid biosynthesis glycosyltransferase WcaL	NA	NA	NA	NA
ARC35964.1\|687976_689836_-	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA
ARC35965.1\|690113_691913_+	FAD-dependent oxidoreductase	NA	NA	NA	NA
ARC35966.1\|692230_693028_+	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	NA	NA	NA	NA
ARC35967.1\|693129_693543_+	hypothetical protein	NA	NA	NA	NA
ARC35968.1\|693728_694181_+	CoA-binding protein	NA	NA	NA	NA
ARC35969.1\|694195_695215_-	ribose-phosphate pyrophosphokinase	A0A2K9L2G2	Tupanvirus	1.3e-45	38.8
ARC35970.1\|695300_695900_+	2-hydroxychromene-2-carboxylate isomerase	NA	NA	NA	NA
ARC35971.1\|695896_696667_+	alpha/beta hydrolase	NA	NA	NA	NA
ARC35972.1\|696701_697049_-	hypothetical protein	NA	NA	NA	NA
ARC35973.1\|697145_697592_-	ATP synthase F1 subunit epsilon	NA	NA	NA	NA
ARC35974.1\|697601_699026_-	F0F1 ATP synthase subunit beta	NA	NA	NA	NA
ARC35975.1\|699045_699921_-	F0F1 ATP synthase subunit gamma	NA	NA	NA	NA
ARC35976.1\|699935_701471_-	F0F1 ATP synthase subunit alpha	NA	NA	NA	NA
ARC35977.1\|701470_702037_-	F0F1 ATP synthase subunit delta	NA	NA	NA	NA
ARC35978.1\|702335_703133_-	methyltransferase domain-containing protein	NA	NA	NA	NA
ARC35979.1\|703184_703931_+	hydroxyacylglutathione hydrolase	NA	NA	NA	NA
AVI58288.1\|704195_706517_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	2.3e-170	44.0
AVI58289.1\|706617_710073_-	transcription-repair coupling factor	NA	NA	NA	NA
ARC35980.1\|710118_710667_-	hypothetical protein	NA	NA	NA	NA
ARC35981.1\|710840_711839_+	porphobilinogen synthase	NA	NA	NA	NA
ARC35982.2\|711922_712477_+	twin-arginine translocation pathway signal	NA	NA	NA	NA
ARC35983.1\|712508_713147_-	lytic transglycosylase domain-containing protein	A0A0S2SXL7	Bacillus_phage	1.0e-24	48.0
ARC35984.1\|713369_713858_+	single-stranded DNA-binding protein	A0A0U2C0X4	Paracoccus_phage	1.0e-48	80.2
ARC35985.1\|714107_714524_+	hypothetical protein	NA	NA	NA	NA
ARC35986.1\|714520_715852_+	relaxase	NA	NA	NA	NA
ARC35987.1\|715928_716192_+	type II toxin-antitoxin system ParD family antitoxin	NA	NA	NA	NA
ARC35988.1\|716142_716481_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
ARC35989.1\|716535_717285_+	hypothetical protein	NA	NA	NA	NA
ARC35990.2\|717281_717482_-	hypothetical protein	NA	NA	NA	NA
ARC35991.1\|717569_718916_-\|transposase	IS5/IS1182 family transposase	K4ICS3	Acidithiobacillus_phage	1.1e-52	46.9
ARC35992.1\|719272_719863_+	recombinase family protein	A0A1S6L009	Salmonella_phage	3.9e-34	50.0
ARC35993.1\|719890_720166_+	hypothetical protein	NA	NA	NA	NA
AVI58400.1\|720231_721318_+\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	7.3e-47	39.5
ARC35994.1\|723488_724823_+	trigger factor	NA	NA	NA	NA
ARC35995.1\|725193_726069_+	hypothetical protein	NA	NA	NA	NA
ARC35996.1\|726106_726358_-	DUF2312 domain-containing protein	A0A1X9HX62	Ruegeria_phage	5.1e-28	81.2
ARC35997.1\|726434_726674_+	hypothetical protein	NA	NA	NA	NA
ARC35998.1\|726677_727127_+\|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	NA	NA	NA	NA

DBSCAN-SWA_5

1481159 : 1489997

Azospirillum_phage(16.67%)

integrase

attL 1481041:1481084|attR 1487986:1488029

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1481041:1481084	attL	NA	NA	NA	NA
ARC36625.1\|1481159_1482167_-\|integrase	integrase	B0VK72	Azospirillum_phage	8.1e-24	31.3
ARC36626.1\|1482336_1482555_-	hypothetical protein	NA	NA	NA	NA
ARC36627.1\|1482798_1483134_-	hypothetical protein	NA	NA	NA	NA
ARC36628.1\|1483232_1483415_-	hypothetical protein	NA	NA	NA	NA
ARC36629.1\|1483411_1483765_-	hypothetical protein	NA	NA	NA	NA
ARC36630.1\|1483761_1483965_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
ARC36631.1\|1483961_1484147_-	hypothetical protein	NA	NA	NA	NA
ARC36632.1\|1484471_1485020_+	hypothetical protein	NA	NA	NA	NA
ARC36633.1\|1485080_1485353_+	BrnT family toxin	K4NX81	Burkholderia_phage	3.6e-19	58.4
ARC36634.1\|1485336_1485558_+	hypothetical protein	A0A2H4J5Y5	uncultured_Caudovirales_phage	2.2e-06	38.5
ARC36635.1\|1485694_1486294_-	hypothetical protein	A0A193GYC6	Enterobacter_phage	2.8e-32	43.1
ARC36636.1\|1486807_1487797_-	helix-turn-helix domain-containing protein	F8TUQ7	EBPR_podovirus	1.5e-09	44.0
AVI58307.1\|1488083_1489997_-	selenocysteine-specific translation elongation factor	A0A2K9KZ60	Tupanvirus	1.3e-17	29.5
1487986:1488029	attR	NA	NA	NA	NA

DBSCAN-SWA_6

1666110 : 1710919

Acidithiobacillus_phage(28.57%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVI58318.1\|1666110_1666913_-\|transposase	IS5/IS1182 family transposase	NA	NA	NA	NA
ARC36774.1\|1666890_1667553_-	DNA cytosine methyltransferase	A0A1S5S9X2	Streptococcus_phage	1.5e-18	37.3
ARC36775.1\|1667558_1668557_-	hypothetical protein	NA	NA	NA	NA
ARC36776.1\|1668549_1669131_-	hypothetical protein	NA	NA	NA	NA
ARC36777.1\|1669923_1670103_+	hypothetical protein	NA	NA	NA	NA
ARC36778.1\|1670240_1671173_+\|transposase	IS5/IS1182 family transposase	Q9MCT5	Escherichia_phage	2.7e-58	41.6
ARC36779.1\|1671395_1672457_-	hypothetical protein	NA	NA	NA	NA
ARC36780.1\|1673081_1673543_+	AAC(3)-I family aminoglycoside N-acetyltransferase	NA	NA	NA	NA
ARC36781.1\|1673778_1674195_+	hypothetical protein	NA	NA	NA	NA
ARC36782.1\|1674635_1675313_+	DNA methylase	A0A2K9VH43	Faecalibacterium_phage	3.9e-30	36.8
ARC36783.1\|1675384_1675675_+	hypothetical protein	NA	NA	NA	NA
ARC36784.1\|1677578_1677989_+	single-stranded DNA-binding protein	NA	NA	NA	NA
ARC36785.1\|1678310_1678685_+	hypothetical protein	NA	NA	NA	NA
ARC36786.1\|1679254_1679458_+	hypothetical protein	NA	NA	NA	NA
ARC36787.1\|1679513_1679723_+	hypothetical protein	NA	NA	NA	NA
ARC36788.1\|1679759_1679960_+	hypothetical protein	NA	NA	NA	NA
ARC36789.1\|1680065_1680278_+	hypothetical protein	NA	NA	NA	NA
ARC38505.1\|1680298_1680748_-	DUF2285 domain-containing protein	NA	NA	NA	NA
ARC36790.1\|1680842_1681109_-	hypothetical protein	NA	NA	NA	NA
ARC36791.1\|1681255_1681519_-	DUF2285 domain-containing protein	NA	NA	NA	NA
ARC38506.1\|1681704_1681920_-	XRE family transcriptional regulator	NA	NA	NA	NA
ARC36792.1\|1682132_1682402_+	DNA-binding protein	NA	NA	NA	NA
ARC38507.1\|1682410_1683268_+	RepA replication protein	NA	NA	NA	NA
ARC36793.1\|1683523_1684024_+	DUF2840 domain-containing protein	NA	NA	NA	NA
AVI58319.1\|1684026_1685382_+	DNA methyltransferase	A0A1C9LW16	Vibrio_phage	2.1e-19	37.0
ARC36794.1\|1685378_1685945_+	S26 family signal peptidase	NA	NA	NA	NA
ARC36795.1\|1685981_1686317_+	DUF736 domain-containing protein	NA	NA	NA	NA
ARC36796.1\|1686320_1687139_+	lytic transglycosylase domain-containing protein	Q6J1R1	Burkholderia_virus	3.2e-10	32.7
ARC36797.1\|1687188_1687770_+	hypothetical protein	NA	NA	NA	NA
ARC36798.1\|1687886_1688291_-	DUF1801 domain-containing protein	NA	NA	NA	NA
ARC36799.1\|1688662_1690402_+	DUF3363 domain-containing protein	NA	NA	NA	NA
ARC36800.1\|1690407_1690737_-	hypothetical protein	NA	NA	NA	NA
ARC36801.1\|1690753_1691125_-	VapC toxin family PIN domain ribonuclease	NA	NA	NA	NA
ARC36802.1\|1691121_1691316_-	antitoxin VapB	NA	NA	NA	NA
ARC36803.1\|1691521_1693546_+	conjugal transfer protein TraG	NA	NA	NA	NA
ARC36804.1\|1693549_1693975_+	CopG family transcriptional regulator	NA	NA	NA	NA
ARC36805.1\|1694006_1694261_-	DUF2274 domain-containing protein	NA	NA	NA	NA
ARC36806.1\|1694265_1695438_-	conjugal transfer protein TraI	NA	NA	NA	NA
ARC36807.2\|1695437_1696418_-	P-type conjugative transfer protein TrbG	NA	NA	NA	NA
ARC36808.1\|1696474_1697164_-	conjugal transfer protein TrbF	NA	NA	NA	NA
ARC36809.1\|1697160_1698486_-	P-type conjugative transfer protein TrbL	NA	NA	NA	NA
ARC36810.1\|1698489_1698780_-	conjugal transfer protein TrbK	NA	NA	NA	NA
ARC36811.1\|1698800_1699598_-	P-type conjugative transfer protein TrbJ	NA	NA	NA	NA
ARC36812.1\|1699594_1702228_-	conjugal transfer protein TrbE	NA	NA	NA	NA
ARC36813.1\|1702240_1702522_-	conjugal transfer protein	NA	NA	NA	NA
ARC36814.1\|1702791_1704138_+\|transposase	IS5/IS1182 family transposase	K4ICS3	Acidithiobacillus_phage	1.1e-52	46.9
ARC36815.1\|1704146_1704344_-	hypothetical protein	NA	NA	NA	NA
ARC36816.1\|1704340_1705315_-	P-type conjugative transfer ATPase TrbB	NA	NA	NA	NA
ARC36817.1\|1705446_1706793_+\|transposase	IS5/IS1182 family transposase	K4ICS3	Acidithiobacillus_phage	1.1e-52	46.9
AVI58320.1\|1706900_1707703_-\|transposase	IS5/IS1182 family transposase	NA	NA	NA	NA
ARC38508.1\|1707884_1708772_-	LysR family transcriptional regulator	NA	NA	NA	NA
ARC36818.1\|1709076_1710018_-	LysR family transcriptional regulator	NA	NA	NA	NA
AVI58321.1\|1710117_1710919_+\|transposase	IS5/IS1182 family transposase	NA	NA	NA	NA

DBSCAN-SWA_7

2590790 : 2597588

Acinetobacter_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
ARC37526.1\|2590790_2591948_-	D-alanyl-D-alanine carboxypeptidase	B6DZZ7	Stx2-converting_phage	3.3e-45	32.9
ARC37527.1\|2592068_2592764_-	transcriptional repressor LexA	E5DV74	Deep-sea_thermophilic_phage	4.0e-14	37.8
ARC37528.1\|2592867_2594049_-	molybdopterin molybdenumtransferase MoeA	NA	NA	NA	NA
ARC37529.1\|2594058_2594529_-	cyclic pyranopterin monophosphate synthase MoaC	NA	NA	NA	NA
ARC37530.1\|2594525_2595317_-	indole-3-glycerol phosphate synthase TrpC	A0A0P0IR83	Acinetobacter_phage	1.1e-57	51.4
ARC37531.1\|2595313_2595976_-	uracil-DNA glycosylase	G0ZLG1	Human_herpesvirus	5.5e-37	48.1
ARC37532.1\|2595972_2597001_-	anthranilate phosphoribosyltransferase	A0A0N7IRD9	Acinetobacter_phage	1.8e-58	39.5
ARC37533.1\|2596997_2597588_-	type 1 glutamine amidotransferase	A0A0P0IKJ1	Acinetobacter_phage	3.0e-55	53.4

DBSCAN-SWA_8

2788942 : 2832417

Acidithiobacillus_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVI58354.1\|2788942_2789745_-\|transposase	IS5/IS1182 family transposase	NA	NA	NA	NA
ARC37689.1\|2789786_2790575_+	hypothetical protein	NA	NA	NA	NA
ARC37690.1\|2790692_2792039_+\|transposase	IS5/IS1182 family transposase	K4ICS3	Acidithiobacillus_phage	1.1e-52	46.9
ARC37691.1\|2792407_2793796_-\|transposase	transposase	NA	NA	NA	NA
ARC37692.2\|2794070_2794649_-	hypothetical protein	NA	NA	NA	NA
ARC37693.1\|2794641_2795529_-	nucleotidyltransferase	NA	NA	NA	NA
ARC37694.2\|2796042_2796723_+	hypothetical protein	E3SK99	Synechococcus_phage	2.3e-38	48.4
AVI58355.1\|2796753_2798604_-	hypothetical protein	NA	NA	NA	NA
ARC37696.1\|2798603_2799176_-	plasmid mobilization relaxosome protein MobC	NA	NA	NA	NA
ARC37697.1\|2799243_2799426_+	hypothetical protein	NA	NA	NA	NA
ARC37698.1\|2799479_2799791_-	hypothetical protein	NA	NA	NA	NA
ARC37699.1\|2800052_2800472_+	hypothetical protein	NA	NA	NA	NA
ARC37700.1\|2800497_2801061_+	metallophosphoesterase	A0A023NI32	Nitrincola_phage	3.1e-09	24.8
ARC37701.1\|2801057_2802080_+	WYL domain-containing protein	NA	NA	NA	NA
ARC37702.1\|2802052_2803408_-	hypothetical protein	NA	NA	NA	NA
ARC37703.1\|2803606_2804038_+	hypothetical protein	NA	NA	NA	NA
ARC37704.1\|2804220_2807940_-	hypothetical protein	NA	NA	NA	NA
ARC37705.1\|2807956_2809177_-	exonuclease sbcCD subunit D	NA	NA	NA	NA
ARC37706.1\|2809285_2810170_+	WYL domain-containing protein	NA	NA	NA	NA
ARC37707.1\|2810174_2813678_+	DUF3883 domain-containing protein	A0A1B1IUI1	uncultured_Mediterranean_phage	1.6e-55	27.5
ARC37708.1\|2814970_2815198_-	hypothetical protein	NA	NA	NA	NA
AVI58356.1\|2815327_2818168_+	hypothetical protein	K9MDJ7	Sulfolobus_virus	6.4e-26	22.8
AVI58357.1\|2818180_2821486_+	AAA family ATPase	NA	NA	NA	NA
ARC37709.1\|2821619_2824280_+	hypothetical protein	NA	NA	NA	NA
ARC37710.1\|2824340_2824607_+	hypothetical protein	NA	NA	NA	NA
ARC37711.1\|2824603_2824918_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
ARC37713.1\|2828187_2829021_-\|transposase	IS5/IS1182 family transposase	NA	NA	NA	NA
ARC37714.1\|2829206_2830337_-\|transposase	IS110 family transposase	NA	NA	NA	NA
ARC37715.1\|2830579_2830879_+	hypothetical protein	NA	NA	NA	NA
ARC37716.1\|2831070_2832417_-\|transposase	IS5/IS1182 family transposase	K4ICS3	Acidithiobacillus_phage	1.1e-52	46.9

DBSCAN-SWA_9

2848263 : 2908428

Klosneuvirus(22.22%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
ARC37732.2\|2848263_2849316_+\|transposase	IS110 family transposase	NA	NA	NA	NA
ARC37734.1\|2850500_2851418_-	LysR family transcriptional regulator	NA	NA	NA	NA
ARC37735.1\|2851529_2852558_+	D-cysteine desulfhydrase	NA	NA	NA	NA
ARC38605.1\|2852567_2853770_+	aminotransferase	NA	NA	NA	NA
ARC37736.1\|2853766_2854510_+	aspartate/glutamate racemase family protein	NA	NA	NA	NA
ARC37737.1\|2854550_2855540_+	taurine ABC transporter substrate-binding protein	NA	NA	NA	NA
ARC37738.1\|2855598_2856384_+	nitrate ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	7.2e-36	42.1
ARC37739.1\|2856380_2857259_+	taurine ABC transporter permease	NA	NA	NA	NA
ARC37740.1\|2857306_2858620_+	histidinol dehydrogenase	NA	NA	NA	NA
ARC37741.1\|2858623_2859400_+	alpha/beta hydrolase	NA	NA	NA	NA
ARC37742.2\|2859417_2860431_+	putative sulfate exporter family transporter	NA	NA	NA	NA
ARC37743.1\|2860711_2861071_-	RidA family protein	NA	NA	NA	NA
ARC37744.1\|2861087_2861816_-	DUF3726 domain-containing protein	NA	NA	NA	NA
ARC37745.1\|2861812_2863489_-	hypothetical protein	NA	NA	NA	NA
AVI58358.1\|2863561_2865106_-	BCCT transporter	A0A2I7QNT1	Vibrio_phage	7.3e-08	22.9
ARC37746.1\|2865143_2866157_-	peptidase M19	NA	NA	NA	NA
ARC37747.1\|2866153_2867605_-	aldehyde dehydrogenase family protein	NA	NA	NA	NA
ARC37748.1\|2867694_2868351_+	LysR family transcriptional regulator	NA	NA	NA	NA
ARC37749.1\|2868304_2869651_-\|transposase	IS5/IS1182 family transposase	K4ICS3	Acidithiobacillus_phage	1.1e-52	46.9
ARC37750.1\|2869812_2870055_+	hypothetical protein	NA	NA	NA	NA
ARC37751.1\|2870120_2870546_-	MerR family DNA-binding transcriptional regulator	NA	NA	NA	NA
ARC37752.1\|2870626_2872879_+	heavy metal translocating P-type ATPase	E4ZFI9	Streptococcus_phage	1.9e-121	37.6
ARC37753.2\|2874069_2875191_-	LysR family transcriptional regulator	NA	NA	NA	NA
ARC37754.1\|2875072_2876179_+	FAD-binding oxidoreductase	NA	NA	NA	NA
ARC37755.1\|2876153_2876471_+	hypothetical protein	NA	NA	NA	NA
ARC37756.1\|2876467_2877847_+	FAD-dependent oxidoreductase	NA	NA	NA	NA
ARC37757.1\|2877843_2878608_+	histidine/lysine/arginine/ornithine ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.7e-29	36.1
ARC38606.1\|2878630_2879413_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
ARC37758.1\|2879461_2880151_+	amino acid ABC transporter permease	NA	NA	NA	NA
ARC37759.1\|2880153_2880915_+	amino acid ABC transporter permease	NA	NA	NA	NA
ARC37760.1\|2880911_2881256_+	RidA family protein	NA	NA	NA	NA
ARC37761.1\|2881252_2882179_+	arginase	A0A1V0SJM8	Klosneuvirus	2.9e-20	30.9
ARC37762.1\|2882188_2883277_+	ornithine cyclodeaminase	A0A1V0SL93	Klosneuvirus	9.8e-92	49.9
ARC37763.1\|2883700_2884891_+\|transposase	IS5/IS1182 family transposase	NA	NA	NA	NA
ARC37764.1\|2886231_2888304_-	serine recombinase	NA	NA	NA	NA
ARC37765.1\|2889075_2890260_+\|transposase	IS110 family transposase	NA	NA	NA	NA
ARC37766.1\|2890202_2891555_-\|transposase	IS66 family transposase	A0A0P0ZBS5	Stx2-converting_phage	3.9e-90	43.1
AVI58359.1\|2891614_2891806_-	hypothetical protein	A0A0P0ZBY2	Stx2-converting_phage	2.9e-15	66.7
ARC38607.1\|2891841_2893932_-	serine recombinase	NA	NA	NA	NA
ARC37767.1\|2894579_2894987_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
ARC37768.1\|2895156_2895891_+	hypothetical protein	NA	NA	NA	NA
AVI58360.1\|2895894_2896929_-	hypothetical protein	NA	NA	NA	NA
ARC37771.1\|2896932_2898030_-	hypothetical protein	NA	NA	NA	NA
ARC37772.1\|2898041_2898590_-	hypothetical protein	NA	NA	NA	NA
ARC37773.1\|2899066_2899582_+	RNA polymerase sigma factor	NA	NA	NA	NA
ARC37774.1\|2899578_2900340_+	hypothetical protein	NA	NA	NA	NA
ARC37775.1\|2900406_2900793_+	hypothetical protein	NA	NA	NA	NA
ARC37776.1\|2900789_2901752_+	hypothetical protein	NA	NA	NA	NA
ARC37777.2\|2901748_2902624_+	hypothetical protein	NA	NA	NA	NA
ARC37778.1\|2902651_2904235_-	hypothetical protein	NA	NA	NA	NA
ARC37779.1\|2904260_2904611_-	hypothetical protein	NA	NA	NA	NA
ARC37780.1\|2904769_2905369_-	hypothetical protein	NA	NA	NA	NA
ARC37781.1\|2905395_2905917_-	hypothetical protein	NA	NA	NA	NA
ARC37782.1\|2905978_2906677_-	hypothetical protein	NA	NA	NA	NA
AVI58361.1\|2907625_2908428_-\|transposase	IS5/IS1182 family transposase	NA	NA	NA	NA

DBSCAN-SWA_10

2921014 : 2936188

Acidithiobacillus_phage(54.55%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVI58363.1\|2921014_2921692_-	transcriptional regulator	A0A0M3LPF9	Mannheimia_phage	7.3e-21	31.4
AVI58364.1\|2921800_2922484_+	hypothetical protein	NA	NA	NA	NA
ARC37790.1\|2922686_2922890_+	DNA-binding protein	NA	NA	NA	NA
ARC38608.1\|2922889_2923252_+	hypothetical protein	NA	NA	NA	NA
ARC37791.1\|2923279_2923768_+	hypothetical protein	NA	NA	NA	NA
ARC37792.1\|2923764_2924634_+	hypothetical protein	K4HZX9	Acidithiobacillus_phage	1.3e-99	61.7
ARC37793.1\|2924653_2925253_+	hypothetical protein	K4ICM8	Acidithiobacillus_phage	6.4e-53	62.5
ARC37794.1\|2925264_2926956_+	helicase	G8EY40	Synechococcus_phage	4.6e-40	32.0
ARC38610.1\|2927168_2927369_+	hypothetical protein	NA	NA	NA	NA
ARC37795.1\|2927368_2928136_+	hypothetical protein	K4HZA0	Acidithiobacillus_phage	1.8e-76	57.1
ARC38609.1\|2928132_2930445_+	hypothetical protein	A0A1B2LRS1	Wolbachia_phage	1.2e-70	49.2
ARC37796.1\|2930912_2931449_+	hypothetical protein	K4ICN3	Acidithiobacillus_phage	7.5e-53	66.0
ARC37797.1\|2931445_2931652_+	hypothetical protein	NA	NA	NA	NA
ARC37798.1\|2931648_2932077_+	hypothetical protein	NA	NA	NA	NA
ARC37799.1\|2932488_2933826_+	DNA methylase	A0A2H4JGF1	uncultured_Caudovirales_phage	1.4e-76	39.3
ARC37800.1\|2933822_2934089_+	hypothetical protein	K4I1E3	Acidithiobacillus_phage	7.8e-19	64.5
ARC37801.1\|2934024_2934318_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
ARC37802.1\|2934332_2934608_-	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA
ARC37803.1\|2934683_2935196_-	DUF3489 domain-containing protein	K4HZZ2	Acidithiobacillus_phage	2.8e-12	36.0
ARC37804.1\|2935291_2935516_-	hypothetical protein	NA	NA	NA	NA
ARC37805.1\|2935627_2936188_+	hypothetical protein	A0A2H4JCL4	uncultured_Caudovirales_phage	1.2e-29	45.9

DBSCAN-SWA_11

3006747 : 3044326

Brucella_phage(16.67%)

tail,head,capsid,portal,transposase,terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
ARC37855.1\|3006747_3007134_-	hypothetical protein	A0A2H4JA22	uncultured_Caudovirales_phage	2.2e-06	34.3
ARC37856.1\|3007306_3007918_-	hypothetical protein	A0A1B1IR73	uncultured_Mediterranean_phage	1.3e-24	36.9
ARC37857.1\|3008258_3008621_-	hypothetical protein	NA	NA	NA	NA
ARC38619.1\|3008620_3009124_-	HNH endonuclease	A0A2I7S0H7	Vibrio_phage	6.4e-30	47.3
ARC37858.1\|3009201_3009501_-	hypothetical protein	NA	NA	NA	NA
ARC37859.1\|3009522_3010869_-\|transposase	IS5/IS1182 family transposase	K4ICS3	Acidithiobacillus_phage	1.1e-52	46.9
ARC37860.1\|3011012_3012359_-\|transposase	IS5/IS1182 family transposase	K4ICS3	Acidithiobacillus_phage	1.1e-52	46.9
ARC37861.2\|3012724_3013048_-	hypothetical protein	NA	NA	NA	NA
ARC37862.1\|3013220_3014318_+	hypothetical protein	A0A1B0VBT5	Salmonella_phage	9.4e-18	28.1
ARC37863.1\|3014466_3014655_+	hypothetical protein	NA	NA	NA	NA
ARC37864.1\|3015173_3015404_-	hypothetical protein	NA	NA	NA	NA
ARC37865.1\|3015446_3015803_-	hypothetical protein	NA	NA	NA	NA
ARC37866.1\|3015806_3016337_-	DUF4065 domain-containing protein	NA	NA	NA	NA
ARC37867.1\|3016475_3016709_-	hypothetical protein	NA	NA	NA	NA
ARC37868.1\|3016766_3017045_-	hypothetical protein	NA	NA	NA	NA
ARC37869.2\|3017204_3017483_-	hypothetical protein	NA	NA	NA	NA
ARC37870.1\|3017626_3017836_+	hypothetical protein	NA	NA	NA	NA
ARC38620.1\|3018503_3018854_+	hypothetical protein	NA	NA	NA	NA
ARC37871.1\|3018850_3019600_+	DUF1376 domain-containing protein	NA	NA	NA	NA
ARC37872.1\|3019599_3020244_+	hypothetical protein	NA	NA	NA	NA
ARC37873.1\|3020240_3020453_+	hypothetical protein	NA	NA	NA	NA
ARC37874.1\|3020449_3020920_+	hypothetical protein	NA	NA	NA	NA
ARC37875.1\|3020916_3021291_+	hypothetical protein	NA	NA	NA	NA
ARC37876.1\|3021658_3022294_+	hypothetical protein	NA	NA	NA	NA
ARC37877.1\|3022531_3022750_-	amino acid transporter	NA	NA	NA	NA
ARC37878.1\|3022753_3023164_-	Arc family DNA-binding protein	NA	NA	NA	NA
ARC37879.1\|3023292_3023400_+	hypothetical protein	NA	NA	NA	NA
ARC37881.1\|3024225_3024456_+	hypothetical protein	NA	NA	NA	NA
ARC37882.1\|3024598_3024799_+	hypothetical protein	NA	NA	NA	NA
ARC37883.1\|3024795_3025167_+	hypothetical protein	NA	NA	NA	NA
ARC37884.2\|3025261_3025723_-	hypothetical protein	NA	NA	NA	NA
ARC37885.1\|3026664_3027015_+	hypothetical protein	NA	NA	NA	NA
ARC37886.1\|3027051_3027483_+	HNH endonuclease	Q38456	Bacillus_phage	4.7e-05	40.9
AVI58369.1\|3027862_3028237_+	hypothetical protein	NA	NA	NA	NA
ARC37887.1\|3028236_3029910_+\|terminase	terminase large subunit	Q3HQS7	Burkholderia_phage	4.0e-177	56.5
ARC37888.1\|3029919_3030573_+	hypothetical protein	H9YSG6	environmental_Halophage	1.4e-13	32.7
ARC37889.1\|3030625_3032029_+\|capsid	phage major capsid protein	S4TNE3	Salmonella_phage	3.3e-116	52.9
ARC37890.1\|3032082_3032325_+	hypothetical protein	NA	NA	NA	NA
ARC37891.1\|3032336_3033689_+\|portal	phage portal protein	F8TVA0	EBPR_siphovirus	8.3e-149	62.3
ARC37892.1\|3033685_3034588_+	hypothetical protein	F8TVA1	EBPR_siphovirus	1.6e-18	38.1
ARC37893.1\|3034587_3034917_+\|head,tail	phage gp6-like head-tail connector protein	NA	NA	NA	NA
ARC37894.2\|3034900_3035257_+\|head,tail	head-tail adaptor protein	B4UTP9	Rhizobium_phage	6.1e-11	38.7
ARC37895.1\|3035253_3035640_+	DUF3168 domain-containing protein	A0A141GEW7	Brucella_phage	2.9e-14	39.0
ARC37896.1\|3036020_3036452_+	hypothetical protein	NA	NA	NA	NA
ARC37897.1\|3036444_3036645_+	hypothetical protein	NA	NA	NA	NA
ARC37898.1\|3036713_3037157_+	hypothetical protein	A0A141GEW9	Brucella_phage	3.0e-31	46.9
ARC37899.1\|3037156_3037555_+	gene transfer agent family protein	A0A141GEX0	Brucella_phage	5.8e-18	42.3
ARC37900.1\|3037720_3040639_+	hypothetical protein	M4QSY8	Loktanella_phage	3.7e-37	42.9
ARC37901.1\|3040638_3041307_+	hypothetical protein	NA	NA	NA	NA
ARC37902.1\|3041306_3041921_+	hypothetical protein	NA	NA	NA	NA
ARC37903.1\|3041917_3042304_+	hypothetical protein	NA	NA	NA	NA
ARC37904.1\|3042304_3044326_+	hypothetical protein	A0A291AUU6	Sinorhizobium_phage	2.5e-24	26.1

DBSCAN-SWA_12

3055060 : 3060479

EBPR_siphovirus(33.33%)

integrase,transposase

attL 3049133:3049147|attR 3060663:3060677

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3049133:3049147	attL	NA	NA	NA	NA
ARC37917.1\|3055060_3055633_+	HNH endonuclease	K4F9R1	Cronobacter_phage	1.8e-20	34.3
ARC37918.1\|3055715_3057281_-\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	3.5e-82	36.9
ARC37919.1\|3057349_3057703_-	IS66 family insertion sequence hypothetical protein	S5WJH4	Leptospira_phage	8.2e-08	38.8
ARC38622.2\|3057702_3058161_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
ARC37920.1\|3058238_3059021_+	lysozyme	F8TV87	EBPR_siphovirus	2.1e-32	37.1
ARC37921.1\|3059022_3059361_+	hypothetical protein	F8TVB7	EBPR_siphovirus	1.0e-10	45.6
ARC37922.1\|3059363_3060479_-\|integrase	site-specific integrase	I6NSG1	Burkholderia_phage	1.8e-96	50.7
3060663:3060677	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

4. CP020441

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

39725 : 46688

Enterobacteria_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVI58251.1\|39725_40502_+	iron ABC transporter substrate-binding protein	G3M9Y6	Bacillus_virus	4.2e-12	23.4
ARC35182.1\|40517_42218_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	5.3e-60	31.1
ARC35183.1\|42196_43186_-	siderophore-interacting protein	NA	NA	NA	NA
ARC35184.1\|43337_43919_+	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	2.1e-37	47.0
ARC35185.1\|43915_44953_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	7.4e-97	53.9
ARC35186.1\|44949_45801_+	dTDP-4-dehydrorhamnose reductase	A0A1D7XFA3	Escherichia_phage	8.3e-30	37.5
ARC35187.1\|45797_46688_+	glucose-1-phosphate thymidylyltransferase	I7I009	Enterobacteria_phage	3.6e-92	56.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

5. CP020447

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

56 : 59065

Staphylococcus_phage(20.0%)

protease,transposase,integrase

attL 13113:13132|attR 65481:65500

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
ARC39106.1\|56_767_-\|transposase	IS6 family transposase ISPpa9	A0A0N9SKD3	Staphylococcus_phage	2.2e-23	35.3
ARC39107.1\|763_1231_-	hypothetical protein	NA	NA	NA	NA
ARC39108.1\|1227_1773_-	hypothetical protein	NA	NA	NA	NA
ARC39109.1\|1769_2072_-	hypothetical protein	NA	NA	NA	NA
ARC39110.1\|2096_2285_-	hypothetical protein	NA	NA	NA	NA
ARC39220.1\|5305_6517_-	replication initiation protein	L7TKN6	Rhizobium_phage	1.3e-23	28.7
ARC39111.1\|6731_7661_-	plasmid partitioning protein RepB	A0A240F4U0	Ochrobactrum_phage	4.0e-17	29.0
ARC39112.1\|7644_8838_-	plasmid partitioning protein RepA	A0A240F4U1	Ochrobactrum_phage	1.6e-116	53.8
ARC39113.1\|8973_9855_-	recombinase family protein	A0A0C4UR34	Shigella_phage	3.4e-34	56.8
ARC39114.1\|10117_11329_+	hypothetical protein	NA	NA	NA	NA
ARC39115.1\|11804_12239_+	pseudoazurin	M4SLM5	Cyanophage	4.7e-05	31.9
13113:13132	attL	NA	NA	NA	NA
ARC39116.1\|13526_14027_-	DUF2249 domain-containing protein	NA	NA	NA	NA
ARC39117.1\|14060_14990_-	FAD:protein FMN transferase	NA	NA	NA	NA
ARC39118.1\|14979_15507_-	copper resistance protein CopZ	NA	NA	NA	NA
ARC39119.1\|15507_16326_-	hypothetical protein	NA	NA	NA	NA
ARC39120.1\|16325_17159_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.1e-21	29.8
ARC39121.1\|17159_18485_-	nitrous oxide reductase family maturation protein NosD	NA	NA	NA	NA
ARC39221.1\|18484_20413_-	nitrous-oxide reductase	NA	NA	NA	NA
AVI58437.1\|20414_22730_-	4Fe-4S binding protein	NA	NA	NA	NA
ARC39122.1\|23011_23206_+	hypothetical protein	NA	NA	NA	NA
ARC39125.1\|25186_26101_-	PhnA-like protein	NA	NA	NA	NA
ARC39126.2\|26279_27599_-	cation transporter	NA	NA	NA	NA
ARC39222.1\|29713_30283_+	plasmid pRiA4b ORF-3 family protein	NA	NA	NA	NA
ARC39223.1\|30435_30927_-	protein PsiE	NA	NA	NA	NA
ARC39129.1\|31148_32120_-	hypothetical protein	NA	NA	NA	NA
ARC39130.1\|32192_32684_-	Hsp20/alpha crystallin family protein	NA	NA	NA	NA
ARC39131.1\|32704_33103_-	Hsp20/alpha crystallin family protein	A0A1B2LRT2	Wolbachia_phage	2.5e-05	28.1
ARC39132.1\|33117_33546_-	Hsp20/alpha crystallin family protein	NA	NA	NA	NA
ARC39133.1\|33748_34180_+	MarR family transcriptional regulator	NA	NA	NA	NA
ARC39134.1\|34194_36027_+	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	M4QMW8	Micromonas_pusilla_virus	5.8e-105	43.4
ARC39135.1\|36091_38986_+\|protease	ATP-dependent Clp protease ATP-binding subunit	K4FB40	Cronobacter_phage	6.8e-124	40.3
ARC39136.1\|39063_40236_+	flagellar biosynthesis protein FliA	NA	NA	NA	NA
ARC39137.1\|40232_40880_+	HdeD family acid-resistance protein	NA	NA	NA	NA
ARC39224.1\|40888_41089_+	hypothetical protein	NA	NA	NA	NA
ARC39138.1\|41088_41709_+	hypothetical protein	NA	NA	NA	NA
ARC39139.1\|41710_42271_+	ETC complex I subunit	NA	NA	NA	NA
ARC39140.1\|43043_43973_+	hypothetical protein	A0A1V0SCZ1	Indivirus	6.1e-10	24.9
ARC39141.1\|43936_44359_+	thioredoxin TrxC	A0A0K2FIM3	Achromobacter_phage	9.5e-11	38.8
ARC39142.1\|44407_45577_+	sodium:proton exchanger	NA	NA	NA	NA
ARC39143.1\|45702_46077_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
ARC39144.1\|46073_46241_+	hypothetical protein	NA	NA	NA	NA
ARC39225.1\|46254_48345_-	serine recombinase	A0A0U4IB69	Exiguobacterium_phage	2.7e-05	20.4
ARC39146.1\|49127_50510_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	6.0e-78	39.6
ARC39147.1\|50452_51637_-\|transposase	IS110 family transposase	NA	NA	NA	NA
ARC39148.1\|53655_54708_+\|transposase	IS110 family transposase	NA	NA	NA	NA
ARC39150.1\|56675_56921_+	prevent-host-death family protein	NA	NA	NA	NA
ARC39151.1\|57082_57793_-\|transposase	IS6 family transposase ISPpa9	A0A0N9SKD3	Staphylococcus_phage	2.2e-23	35.3
ARC39152.1\|57842_58028_-	hypothetical protein	NA	NA	NA	NA
ARC39153.2\|58024_59065_-\|integrase	integrase	NA	NA	NA	NA
65481:65500	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP020446

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. CP020444

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. CP020442

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

4. CP020441

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

5. CP020447

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection