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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP019594 Staphylococcus aureus strain GD1539 chromosome, complete genome 11 crisprs cas3,DEDDh,DinG,csa3,TnsE_C,WYL 6 4 11 4

Results visualization

1. CP019594
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP019594_1 260647-260846 Orphan NA
3 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP019594_2 611748-611856 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP019594_3 774857-774939 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP019594_4 824221-824301 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP019594_5 1766473-1766606 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP019594_6 1768937-1769019 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP019594_7 1857290-1857383 Orphan NA
1 spacers
csa3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP019594_8 2132857-2133069 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP019594_9 2188490-2188640 Orphan NA
2 spacers
csa3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP019594_10 2352069-2352154 Orphan NA
1 spacers
WYL

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP019594_11 2528285-2528379 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CP019594_3 3.1|774883|31|CP019594|CRISPRCasFinder 774883-774913 31 CP019594.2 911960-911990 0 1.0
CP019594_3 3.1|774883|31|CP019594|CRISPRCasFinder 774883-774913 31 CP019594.2 932752-932782 0 1.0
CP019594_3 3.1|774883|31|CP019594|CRISPRCasFinder 774883-774913 31 CP019594.2 1954883-1954913 0 1.0
CP019594_3 3.1|774883|31|CP019594|CRISPRCasFinder 774883-774913 31 CP019594.2 2058372-2058402 0 1.0
CP019594_5 5.1|1766505|25|CP019594|PILER-CR 1766505-1766529 25 CP019594.2 728558-728582 0 1.0
CP019594_5 5.1|1766505|25|CP019594|PILER-CR 1766505-1766529 25 CP019594.2 2058360-2058384 0 1.0
CP019594_10 10.1|2352099|26|CP019594|CRISPRCasFinder 2352099-2352124 26 CP019594.2 1646481-1646506 0 1.0
CP019594_3 3.1|774883|31|CP019594|CRISPRCasFinder 774883-774913 31 CP019594.2 242740-242770 1 0.968
CP019594_3 3.1|774883|31|CP019594|CRISPRCasFinder 774883-774913 31 CP019594.2 242798-242828 1 0.968
CP019594_3 3.1|774883|31|CP019594|CRISPRCasFinder 774883-774913 31 CP019594.2 334357-334387 1 0.968
CP019594_3 3.1|774883|31|CP019594|CRISPRCasFinder 774883-774913 31 CP019594.2 603215-603245 1 0.968
CP019594_3 3.1|774883|31|CP019594|CRISPRCasFinder 774883-774913 31 CP019594.2 728540-728570 1 0.968
CP019594_3 3.1|774883|31|CP019594|CRISPRCasFinder 774883-774913 31 CP019594.2 819814-819844 1 0.968
CP019594_3 3.1|774883|31|CP019594|CRISPRCasFinder 774883-774913 31 CP019594.2 1025820-1025850 1 0.968
CP019594_3 3.1|774883|31|CP019594|CRISPRCasFinder 774883-774913 31 CP019594.2 1127193-1127223 1 0.968
CP019594_3 3.1|774883|31|CP019594|CRISPRCasFinder 774883-774913 31 CP019594.2 1127247-1127277 1 0.968
CP019594_3 3.1|774883|31|CP019594|CRISPRCasFinder 774883-774913 31 CP019594.2 1857251-1857281 1 0.968
CP019594_3 3.1|774883|31|CP019594|CRISPRCasFinder 774883-774913 31 CP019594.2 2306893-2306923 1 0.968
CP019594_3 3.1|774883|31|CP019594|CRISPRCasFinder 774883-774913 31 CP019594.2 2351987-2352017 1 0.968
CP019594_5 5.1|1766505|25|CP019594|PILER-CR 1766505-1766529 25 CP019594.2 728349-728373 1 0.96
CP019594_5 5.1|1766505|25|CP019594|PILER-CR 1766505-1766529 25 CP019594.2 819802-819826 1 0.96
CP019594_5 5.1|1766505|25|CP019594|PILER-CR 1766505-1766529 25 CP019594.2 932740-932764 1 0.96
CP019594_5 5.1|1766505|25|CP019594|PILER-CR 1766505-1766529 25 CP019594.2 1768885-1768909 1 0.96
CP019594_10 10.1|2352099|26|CP019594|CRISPRCasFinder 2352099-2352124 26 CP019594.2 819878-819903 1 0.962
CP019594_1 1.1|260678|25|CP019594|CRISPRCasFinder 260678-260702 25 CP019594.2 260847-260871 2 0.92
CP019594_1 1.2|260734|25|CP019594|CRISPRCasFinder 260734-260758 25 CP019594.2 2143931-2143955 2 0.92
CP019594_3 3.1|774883|31|CP019594|CRISPRCasFinder 774883-774913 31 CP019594.2 783864-783894 2 0.935
CP019594_3 3.1|774883|31|CP019594|CRISPRCasFinder 774883-774913 31 CP019594.2 823922-823952 2 0.935
CP019594_3 3.1|774883|31|CP019594|CRISPRCasFinder 774883-774913 31 CP019594.2 1336165-1336195 2 0.935
CP019594_3 3.1|774883|31|CP019594|CRISPRCasFinder 774883-774913 31 CP019594.2 1382254-1382284 2 0.935
CP019594_3 3.1|774883|31|CP019594|CRISPRCasFinder 774883-774913 31 CP019594.2 2317641-2317671 2 0.935
CP019594_3 3.1|774883|31|CP019594|CRISPRCasFinder 774883-774913 31 CP019594.2 2317696-2317726 2 0.935
CP019594_3 3.1|774883|31|CP019594|CRISPRCasFinder 774883-774913 31 CP019594.2 2754287-2754317 2 0.935
CP019594_4 4.1|824246|31|CP019594|CRISPRCasFinder 824246-824276 31 CP019594.2 769280-769310 2 0.935
CP019594_5 5.1|1766505|25|CP019594|PILER-CR 1766505-1766529 25 CP019594.2 242728-242752 2 0.92
CP019594_5 5.1|1766505|25|CP019594|PILER-CR 1766505-1766529 25 CP019594.2 242786-242810 2 0.92
CP019594_5 5.1|1766505|25|CP019594|PILER-CR 1766505-1766529 25 CP019594.2 334375-334399 2 0.92
CP019594_5 5.1|1766505|25|CP019594|PILER-CR 1766505-1766529 25 CP019594.2 603233-603257 2 0.92
CP019594_5 5.1|1766505|25|CP019594|PILER-CR 1766505-1766529 25 CP019594.2 911978-912002 2 0.92
CP019594_5 5.1|1766505|25|CP019594|PILER-CR 1766505-1766529 25 CP019594.2 1025808-1025832 2 0.92
CP019594_5 5.1|1766505|25|CP019594|PILER-CR 1766505-1766529 25 CP019594.2 1127100-1127124 2 0.92
CP019594_5 5.1|1766505|25|CP019594|PILER-CR 1766505-1766529 25 CP019594.2 1127211-1127235 2 0.92
CP019594_5 5.1|1766505|25|CP019594|PILER-CR 1766505-1766529 25 CP019594.2 1127265-1127289 2 0.92
CP019594_5 5.1|1766505|25|CP019594|PILER-CR 1766505-1766529 25 CP019594.2 1857269-1857293 2 0.92
CP019594_5 5.1|1766505|25|CP019594|PILER-CR 1766505-1766529 25 CP019594.2 1954871-1954895 2 0.92
CP019594_5 5.1|1766505|25|CP019594|PILER-CR 1766505-1766529 25 CP019594.2 2306881-2306905 2 0.92
CP019594_5 5.1|1766505|25|CP019594|PILER-CR 1766505-1766529 25 CP019594.2 2317629-2317653 2 0.92
CP019594_5 5.1|1766505|25|CP019594|PILER-CR 1766505-1766529 25 CP019594.2 2317684-2317708 2 0.92
CP019594_5 5.1|1766505|25|CP019594|PILER-CR 1766505-1766529 25 CP019594.2 2317739-2317763 2 0.92
CP019594_5 5.1|1766505|25|CP019594|PILER-CR 1766505-1766529 25 CP019594.2 2455801-2455825 2 0.92
CP019594_5 5.1|1766505|25|CP019594|PILER-CR 1766505-1766529 25 CP019594.2 2754275-2754299 2 0.92
CP019594_10 10.1|2352099|26|CP019594|CRISPRCasFinder 2352099-2352124 26 CP019594.2 824023-824048 2 0.923
CP019594_10 10.1|2352099|26|CP019594|CRISPRCasFinder 2352099-2352124 26 CP019594.2 911765-911790 2 0.923
CP019594_10 10.1|2352099|26|CP019594|CRISPRCasFinder 2352099-2352124 26 CP019594.2 1331836-1331861 2 0.923
CP019594_10 10.1|2352099|26|CP019594|CRISPRCasFinder 2352099-2352124 26 CP019594.2 2143969-2143994 2 0.923
CP019594_10 10.1|2352099|26|CP019594|CRISPRCasFinder 2352099-2352124 26 CP019594.2 2483997-2484022 2 0.923

1. spacer 3.1|774883|31|CP019594|CRISPRCasFinder matches to position: 911960-911990, mismatch: 0, identity: 1.0

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttcttttcgaaattctctgtgttggggccc	Protospacer
*******************************

2. spacer 3.1|774883|31|CP019594|CRISPRCasFinder matches to position: 932752-932782, mismatch: 0, identity: 1.0

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttcttttcgaaattctctgtgttggggccc	Protospacer
*******************************

3. spacer 3.1|774883|31|CP019594|CRISPRCasFinder matches to position: 1954883-1954913, mismatch: 0, identity: 1.0

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttcttttcgaaattctctgtgttggggccc	Protospacer
*******************************

4. spacer 3.1|774883|31|CP019594|CRISPRCasFinder matches to position: 2058372-2058402, mismatch: 0, identity: 1.0

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttcttttcgaaattctctgtgttggggccc	Protospacer
*******************************

5. spacer 5.1|1766505|25|CP019594|PILER-CR matches to position: 728558-728582, mismatch: 0, identity: 1.0

tttcgaaaagaaattctacaaacaa	CRISPR spacer
tttcgaaaagaaattctacaaacaa	Protospacer
*************************

6. spacer 5.1|1766505|25|CP019594|PILER-CR matches to position: 2058360-2058384, mismatch: 0, identity: 1.0

tttcgaaaagaaattctacaaacaa	CRISPR spacer
tttcgaaaagaaattctacaaacaa	Protospacer
*************************

7. spacer 10.1|2352099|26|CP019594|CRISPRCasFinder matches to position: 1646481-1646506, mismatch: 0, identity: 1.0

cggggccccaacatagaagctggcgg	CRISPR spacer
cggggccccaacatagaagctggcgg	Protospacer
**************************

8. spacer 3.1|774883|31|CP019594|CRISPRCasFinder matches to position: 242740-242770, mismatch: 1, identity: 0.968

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttcttttcgaaattctctttgttggggccc	Protospacer
******************* ***********

9. spacer 3.1|774883|31|CP019594|CRISPRCasFinder matches to position: 242798-242828, mismatch: 1, identity: 0.968

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttcttttcgaaattctctttgttggggccc	Protospacer
******************* ***********

10. spacer 3.1|774883|31|CP019594|CRISPRCasFinder matches to position: 334357-334387, mismatch: 1, identity: 0.968

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttcttttcgaaattctctatgttggggccc	Protospacer
*******************.***********

11. spacer 3.1|774883|31|CP019594|CRISPRCasFinder matches to position: 603215-603245, mismatch: 1, identity: 0.968

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttcttttcgaaattctctgtgttgggcccc	Protospacer
*************************** ***

12. spacer 3.1|774883|31|CP019594|CRISPRCasFinder matches to position: 728540-728570, mismatch: 1, identity: 0.968

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttcttttcgaaattctctttgttggggccc	Protospacer
******************* ***********

13. spacer 3.1|774883|31|CP019594|CRISPRCasFinder matches to position: 819814-819844, mismatch: 1, identity: 0.968

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttcttttcgaaattctctatgttggggccc	Protospacer
*******************.***********

14. spacer 3.1|774883|31|CP019594|CRISPRCasFinder matches to position: 1025820-1025850, mismatch: 1, identity: 0.968

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttcttttcgaaattctctttgttggggccc	Protospacer
******************* ***********

15. spacer 3.1|774883|31|CP019594|CRISPRCasFinder matches to position: 1127193-1127223, mismatch: 1, identity: 0.968

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttctattcgaaattctctgtgttggggccc	Protospacer
***** *************************

16. spacer 3.1|774883|31|CP019594|CRISPRCasFinder matches to position: 1127247-1127277, mismatch: 1, identity: 0.968

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttctattcgaaattctctgtgttggggccc	Protospacer
***** *************************

17. spacer 3.1|774883|31|CP019594|CRISPRCasFinder matches to position: 1857251-1857281, mismatch: 1, identity: 0.968

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttcttgtcgaaattctctgtgttggggccc	Protospacer
****** ************************

18. spacer 3.1|774883|31|CP019594|CRISPRCasFinder matches to position: 2306893-2306923, mismatch: 1, identity: 0.968

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttcttttcgaaattctctttgttggggccc	Protospacer
******************* ***********

19. spacer 3.1|774883|31|CP019594|CRISPRCasFinder matches to position: 2351987-2352017, mismatch: 1, identity: 0.968

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttctttttgaaattctctgtgttggggccc	Protospacer
********.**********************

20. spacer 5.1|1766505|25|CP019594|PILER-CR matches to position: 728349-728373, mismatch: 1, identity: 0.96

tttcgaaaagaaattctacaaacaa	CRISPR spacer
ttttgaaaagaaattctacaaacaa	Protospacer
***.*********************

21. spacer 5.1|1766505|25|CP019594|PILER-CR matches to position: 819802-819826, mismatch: 1, identity: 0.96

tttcgaaaagaaattctacaaacaa	CRISPR spacer
tttcgaaaagaaattctacagacaa	Protospacer
********************.****

22. spacer 5.1|1766505|25|CP019594|PILER-CR matches to position: 932740-932764, mismatch: 1, identity: 0.96

tttcgaaaagaaattctacaaacaa	CRISPR spacer
tttcgaaaagaaattctacaagcaa	Protospacer
*********************.***

23. spacer 5.1|1766505|25|CP019594|PILER-CR matches to position: 1768885-1768909, mismatch: 1, identity: 0.96

tttcgaaaagaaattctacaaacaa	CRISPR spacer
tttcgaaaagaaattctacagacaa	Protospacer
********************.****

24. spacer 10.1|2352099|26|CP019594|CRISPRCasFinder matches to position: 819878-819903, mismatch: 1, identity: 0.962

cggggccccaacatagaagctggcgg	CRISPR spacer
cggggccccaacatagaagctgacgg	Protospacer
**********************.***

25. spacer 1.1|260678|25|CP019594|CRISPRCasFinder matches to position: 260847-260871, mismatch: 2, identity: 0.92

ggcgaaaatacagcttacaataatg	CRISPR spacer
ggcgaaaagtcagcttacaataatg	Protospacer
********  ***************

26. spacer 1.2|260734|25|CP019594|CRISPRCasFinder matches to position: 2143931-2143955, mismatch: 2, identity: 0.92

ttggaacagcaatttctacagacaa	CRISPR spacer
ttggaacaccaattcctacagacaa	Protospacer
******** *****.**********

27. spacer 3.1|774883|31|CP019594|CRISPRCasFinder matches to position: 783864-783894, mismatch: 2, identity: 0.935

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttcatttcgaaattctctatgttggggccc	Protospacer
**** **************.***********

28. spacer 3.1|774883|31|CP019594|CRISPRCasFinder matches to position: 823922-823952, mismatch: 2, identity: 0.935

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttcttttcgaaatcctctgtgttggggacc	Protospacer
**************.************* **

29. spacer 3.1|774883|31|CP019594|CRISPRCasFinder matches to position: 1336165-1336195, mismatch: 2, identity: 0.935

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttcttttcggaattctctgtgttggagccc	Protospacer
**********.***************.****

30. spacer 3.1|774883|31|CP019594|CRISPRCasFinder matches to position: 1382254-1382284, mismatch: 2, identity: 0.935

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttcttttcgaaaatctctgtgttgaggccc	Protospacer
************* ***********.*****

31. spacer 3.1|774883|31|CP019594|CRISPRCasFinder matches to position: 2317641-2317671, mismatch: 2, identity: 0.935

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttctttttgaaattctctatgttggggccc	Protospacer
********.**********.***********

32. spacer 3.1|774883|31|CP019594|CRISPRCasFinder matches to position: 2317696-2317726, mismatch: 2, identity: 0.935

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttctttttgaaattctctatgttggggccc	Protospacer
********.**********.***********

33. spacer 3.1|774883|31|CP019594|CRISPRCasFinder matches to position: 2754287-2754317, mismatch: 2, identity: 0.935

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttcttttcgaaattctctgtattgggggcc	Protospacer
*********************.****** **

34. spacer 4.1|824246|31|CP019594|CRISPRCasFinder matches to position: 769280-769310, mismatch: 2, identity: 0.935

aagaaccaatacataataaagcataagtgat	CRISPR spacer
aagaaccaatacataataaatcattagtgat	Protospacer
******************** *** ******

35. spacer 5.1|1766505|25|CP019594|PILER-CR matches to position: 242728-242752, mismatch: 2, identity: 0.92

tttcgaaaagaaattctacaaacaa	CRISPR spacer
tttcgaaaagaaattctacaggcaa	Protospacer
********************..***

36. spacer 5.1|1766505|25|CP019594|PILER-CR matches to position: 242786-242810, mismatch: 2, identity: 0.92

tttcgaaaagaaattctacaaacaa	CRISPR spacer
tttcgaaaagaaattctacaggcaa	Protospacer
********************..***

37. spacer 5.1|1766505|25|CP019594|PILER-CR matches to position: 334375-334399, mismatch: 2, identity: 0.92

tttcgaaaagaaattctacaaacaa	CRISPR spacer
tttcgaaaagaaattctacaggcaa	Protospacer
********************..***

38. spacer 5.1|1766505|25|CP019594|PILER-CR matches to position: 603233-603257, mismatch: 2, identity: 0.92

tttcgaaaagaaattctacaaacaa	CRISPR spacer
tttcgaaaagaaattctacaggcaa	Protospacer
********************..***

39. spacer 5.1|1766505|25|CP019594|PILER-CR matches to position: 911978-912002, mismatch: 2, identity: 0.92

tttcgaaaagaaattctacaaacaa	CRISPR spacer
tttcgaaaagaaattctacaggcaa	Protospacer
********************..***

40. spacer 5.1|1766505|25|CP019594|PILER-CR matches to position: 1025808-1025832, mismatch: 2, identity: 0.92

tttcgaaaagaaattctacaaacaa	CRISPR spacer
tttcgaaaagaaattctacaggcaa	Protospacer
********************..***

41. spacer 5.1|1766505|25|CP019594|PILER-CR matches to position: 1127100-1127124, mismatch: 2, identity: 0.92

tttcgaaaagaaattctacaaacaa	CRISPR spacer
tttcgaatagaaattctacagacaa	Protospacer
******* ************.****

42. spacer 5.1|1766505|25|CP019594|PILER-CR matches to position: 1127211-1127235, mismatch: 2, identity: 0.92

tttcgaaaagaaattctacaaacaa	CRISPR spacer
tttcgaatagaaattctacaagcaa	Protospacer
******* *************.***

43. spacer 5.1|1766505|25|CP019594|PILER-CR matches to position: 1127265-1127289, mismatch: 2, identity: 0.92

tttcgaaaagaaattctacaaacaa	CRISPR spacer
tttcgaatagaaattctacaagcaa	Protospacer
******* *************.***

44. spacer 5.1|1766505|25|CP019594|PILER-CR matches to position: 1857269-1857293, mismatch: 2, identity: 0.92

tttcgaaaagaaattctacaaacaa	CRISPR spacer
tttcgacaagaaattctacaagcaa	Protospacer
****** **************.***

45. spacer 5.1|1766505|25|CP019594|PILER-CR matches to position: 1954871-1954895, mismatch: 2, identity: 0.92

tttcgaaaagaaattctacaaacaa	CRISPR spacer
tttcgaaaagaaattctacaggcaa	Protospacer
********************..***

46. spacer 5.1|1766505|25|CP019594|PILER-CR matches to position: 2306881-2306905, mismatch: 2, identity: 0.92

tttcgaaaagaaattctacaaacaa	CRISPR spacer
tttcgaaaagaaattctacaggcaa	Protospacer
********************..***

47. spacer 5.1|1766505|25|CP019594|PILER-CR matches to position: 2317629-2317653, mismatch: 2, identity: 0.92

tttcgaaaagaaattctacaaacaa	CRISPR spacer
tttcaaaaagaaattctacagacaa	Protospacer
****.***************.****

48. spacer 5.1|1766505|25|CP019594|PILER-CR matches to position: 2317684-2317708, mismatch: 2, identity: 0.92

tttcgaaaagaaattctacaaacaa	CRISPR spacer
tttcaaaaagaaattctacagacaa	Protospacer
****.***************.****

49. spacer 5.1|1766505|25|CP019594|PILER-CR matches to position: 2317739-2317763, mismatch: 2, identity: 0.92

tttcgaaaagaaattctacaaacaa	CRISPR spacer
tttcaaaaagaaattctacagacaa	Protospacer
****.***************.****

50. spacer 5.1|1766505|25|CP019594|PILER-CR matches to position: 2455801-2455825, mismatch: 2, identity: 0.92

tttcgaaaagaaattctacaaacaa	CRISPR spacer
tttcaaaaagaaattctacagacaa	Protospacer
****.***************.****

51. spacer 5.1|1766505|25|CP019594|PILER-CR matches to position: 2754275-2754299, mismatch: 2, identity: 0.92

tttcgaaaagaaattctacaaacaa	CRISPR spacer
tttcgaaaagaaattctacaggcaa	Protospacer
********************..***

52. spacer 10.1|2352099|26|CP019594|CRISPRCasFinder matches to position: 824023-824048, mismatch: 2, identity: 0.923

cggggccccaacatagaagctggcgg	CRISPR spacer
cggggccccaacatagtagcaggcgg	Protospacer
**************** *** *****

53. spacer 10.1|2352099|26|CP019594|CRISPRCasFinder matches to position: 911765-911790, mismatch: 2, identity: 0.923

cggggccccaacatagaagctggcgg	CRISPR spacer
cggggccccaacacagaagctggtgg	Protospacer
*************.*********.**

54. spacer 10.1|2352099|26|CP019594|CRISPRCasFinder matches to position: 1331836-1331861, mismatch: 2, identity: 0.923

cggggccccaacatagaagctggcgg	CRISPR spacer
cggggccccaacacagaaactggcgg	Protospacer
*************.****.*******

55. spacer 10.1|2352099|26|CP019594|CRISPRCasFinder matches to position: 2143969-2143994, mismatch: 2, identity: 0.923

cggggccccaacatagaagctggcgg	CRISPR spacer
cggggccccaacacaaaagctggcgg	Protospacer
*************.*.**********

56. spacer 10.1|2352099|26|CP019594|CRISPRCasFinder matches to position: 2483997-2484022, mismatch: 2, identity: 0.923

cggggccccaacatagaagctggcgg	CRISPR spacer
cggggccccaacacagtagctggcgg	Protospacer
*************.** *********

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
CP019594_1 1.1|260678|25|CP019594|CRISPRCasFinder 260678-260702 25 NC_014792 Enterobacteria phage vB_EcoM-VR7, complete genome 154175-154199 3 0.88
CP019594_1 1.2|260734|25|CP019594|CRISPRCasFinder 260734-260758 25 MW117966 Synechococcus phage S-H9-1, complete genome 42366-42390 4 0.84
CP019594_7 7.1|1857324|26|CP019594|CRISPRCasFinder 1857324-1857349 26 NZ_CP053838 Aliiarcobacter faecis strain CCUG 66484 plasmid pAFAEC, complete sequence 17379-17404 4 0.846
CP019594_7 7.1|1857324|26|CP019594|CRISPRCasFinder 1857324-1857349 26 NZ_CP017210 Borreliella burgdorferi strain B331 plasmid B331_cp9, complete sequence 2023-2048 4 0.846
CP019594_1 1.2|260734|25|CP019594|CRISPRCasFinder 260734-260758 25 NZ_CP038259 Acinetobacter baumannii strain 39741 plasmid pEH_gr13, complete sequence 11151-11175 5 0.8
CP019594_7 7.1|1857324|26|CP019594|CRISPRCasFinder 1857324-1857349 26 NC_008443 Borrelia burgdorferi strain Ip21 plasmid, complete sequence 5652-5677 5 0.808
CP019594_7 7.1|1857324|26|CP019594|CRISPRCasFinder 1857324-1857349 26 NC_010631 Nostoc punctiforme PCC 73102 plasmid pNPUN01, complete sequence 3460-3485 5 0.808
CP019594_7 7.1|1857324|26|CP019594|CRISPRCasFinder 1857324-1857349 26 NC_010632 Nostoc punctiforme PCC 73102 plasmid pNPUN02, complete sequence 13739-13764 5 0.808
CP019594_1 1.2|260734|25|CP019594|CRISPRCasFinder 260734-260758 25 NZ_CP047617 Lactococcus raffinolactis strain Lr_19_5 plasmid pLraf_19_5_1, complete sequence 79395-79419 6 0.76
CP019594_7 7.1|1857324|26|CP019594|CRISPRCasFinder 1857324-1857349 26 MK448662 Streptococcus satellite phage Javan97, complete genome 6198-6223 6 0.769
CP019594_8 8.1|2132904|34|CP019594|CRISPRCasFinder 2132904-2132937 34 NC_027332 Acinetobacter phage YMC13/03/R2096, complete genome 68639-68672 11 0.676
CP019594_8 8.1|2132904|34|CP019594|CRISPRCasFinder 2132904-2132937 34 KY000079 Acinetobacter phage AM24, complete genome 74925-74958 11 0.676

1. spacer 1.1|260678|25|CP019594|CRISPRCasFinder matches to NC_014792 (Enterobacteria phage vB_EcoM-VR7, complete genome) position: , mismatch: 3, identity: 0.88

ggcgaaaatacagcttacaataatg	CRISPR spacer
gacgaaaatacatattacaataatg	Protospacer
*.**********  ***********

2. spacer 1.2|260734|25|CP019594|CRISPRCasFinder matches to MW117966 (Synechococcus phage S-H9-1, complete genome) position: , mismatch: 4, identity: 0.84

ttggaacagcaatttctacagacaa	CRISPR spacer
ttggaacagcaatttctactggtat	Protospacer
******************* *..* 

3. spacer 7.1|1857324|26|CP019594|CRISPRCasFinder matches to NZ_CP053838 (Aliiarcobacter faecis strain CCUG 66484 plasmid pAFAEC, complete sequence) position: , mismatch: 4, identity: 0.846

agaatttcaaaaaagaaattctacag	CRISPR spacer
agaatttcaaaaaataaaatctattg	Protospacer
************** *** ****. *

4. spacer 7.1|1857324|26|CP019594|CRISPRCasFinder matches to NZ_CP017210 (Borreliella burgdorferi strain B331 plasmid B331_cp9, complete sequence) position: , mismatch: 4, identity: 0.846

agaatttcaaaaaagaaattctacag	CRISPR spacer
acaatttcaaaaaagaaatattacac	Protospacer
* ***************** .**** 

5. spacer 1.2|260734|25|CP019594|CRISPRCasFinder matches to NZ_CP038259 (Acinetobacter baumannii strain 39741 plasmid pEH_gr13, complete sequence) position: , mismatch: 5, identity: 0.8

ttggaacagcaatttctacagacaa	CRISPR spacer
ctggaacagcaatttctccagaggt	Protospacer
.**************** **** . 

6. spacer 7.1|1857324|26|CP019594|CRISPRCasFinder matches to NC_008443 (Borrelia burgdorferi strain Ip21 plasmid, complete sequence) position: , mismatch: 5, identity: 0.808

agaatttcaaaaaagaaattctacag	CRISPR spacer
ccaatttcaaaaaagaaattttccac	Protospacer
  ******************.* ** 

7. spacer 7.1|1857324|26|CP019594|CRISPRCasFinder matches to NC_010631 (Nostoc punctiforme PCC 73102 plasmid pNPUN01, complete sequence) position: , mismatch: 5, identity: 0.808

agaatttcaaaaaagaaattctacag	CRISPR spacer
tgaatgtcaaaaaagaaattcttgaa	Protospacer
 **** ****************  *.

8. spacer 7.1|1857324|26|CP019594|CRISPRCasFinder matches to NC_010632 (Nostoc punctiforme PCC 73102 plasmid pNPUN02, complete sequence) position: , mismatch: 5, identity: 0.808

agaatttcaaaaaagaaattctacag	CRISPR spacer
tgaatgtcaaaaaagaaattcttgaa	Protospacer
 **** ****************  *.

9. spacer 1.2|260734|25|CP019594|CRISPRCasFinder matches to NZ_CP047617 (Lactococcus raffinolactis strain Lr_19_5 plasmid pLraf_19_5_1, complete sequence) position: , mismatch: 6, identity: 0.76

ttggaacagcaatttctacagacaa	CRISPR spacer
ctggaacagcaatttctacattatc	Protospacer
.*******************     

10. spacer 7.1|1857324|26|CP019594|CRISPRCasFinder matches to MK448662 (Streptococcus satellite phage Javan97, complete genome) position: , mismatch: 6, identity: 0.769

agaatttcaaaaaagaaattctacag	CRISPR spacer
gctttttcaaaaaagaaattctagac	Protospacer
.   ******************* * 

11. spacer 8.1|2132904|34|CP019594|CRISPRCasFinder matches to NC_027332 (Acinetobacter phage YMC13/03/R2096, complete genome) position: , mismatch: 11, identity: 0.676

tgctggtaccacgatgcgtcttgatgtagtgcta	CRISPR spacer
gatcaataccacgatgcgtcttgaagtggtagaa	Protospacer
 .....****************** **.**.  *

12. spacer 8.1|2132904|34|CP019594|CRISPRCasFinder matches to KY000079 (Acinetobacter phage AM24, complete genome) position: , mismatch: 11, identity: 0.676

tgctggtaccacgatgcgtcttgatgtagtgcta	CRISPR spacer
gatcaataccacgatgcgtcttgaagtggtagaa	Protospacer
 .....****************** **.**.  *

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 706731 : 714551 10 Hokovirus(16.67%) NA NA
DBSCAN-SWA_2 726521 : 740837 17 uncultured_Caudovirales_phage(50.0%) NA NA
DBSCAN-SWA_3 828332 : 873885 67 Staphylococcus_phage(76.56%) head,plate,tail,holin,terminase,portal,capsid,integrase attL 823184:823199|attR 880822:880837
DBSCAN-SWA_4 955518 : 1008642 54 Streptococcus_phage(33.33%) protease,tRNA,bacteriocin,holin NA
DBSCAN-SWA_5 1027315 : 1035788 9 Synechococcus_phage(33.33%) NA NA
DBSCAN-SWA_6 1293213 : 1299968 9 Staphylococcus_phage(83.33%) head NA
DBSCAN-SWA_7 1475049 : 1557328 104 Staphylococcus_phage(85.53%) protease,head,tail,holin,portal,terminase,tRNA,capsid,integrase attL 1511440:1511460|attR 1557333:1557353
DBSCAN-SWA_8 1618079 : 1626391 7 Staphylococcus_phage(16.67%) tRNA NA
DBSCAN-SWA_9 1695815 : 1704858 7 uncultured_Mediterranean_phage(50.0%) tRNA NA
DBSCAN-SWA_10 1839793 : 1876438 44 Staphylococcus_phage(90.91%) protease,transposase NA
DBSCAN-SWA_11 1979997 : 2064587 108 Staphylococcus_phage(84.62%) transposase,protease,head,tail,holin,terminase,portal,capsid,integrase attL 2028261:2028278|attR 2054450:2054467
Click the colored protein region to show detailed information
Click the colored protein region to show detailed information
Click the colored protein region to show detailed information
Click the colored protein region to show detailed information
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
CP019594.2|ARH75280.1|1853383_1853608_-|hypothetical-protein 1853383_1853608_- 74 aa aa NA LuxR_C_like NA 1839793-1876438 yes
CP019594.2|ARH75426.1|2004105_2004282_-|hypothetical-protein 2004105_2004282_- 58 aa aa NA WHTH_GntR NA 1979997-2064587 yes
CP019594.2|ARH75427.1|2004523_2004622_-|hypothetical-protein 2004523_2004622_- 32 aa aa NA WHTH_GntR NA 1979997-2064587 yes
CP019594.2|ARH75490.1|2048002_2048263_-|transcriptional-regulator 2048002_2048263_- 86 aa aa NA HTH_38 NA 1979997-2064587 yes