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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
AP018690 Vibrio aphrogenes CA-1004 DNA, chromosome 2, complete geome 3 crisprs NA 0 19 0 0
AP018689 Vibrio aphrogenes CA-1004 DNA, chromosome 1, complete geome 2 crisprs NA 0 0 0 0

Results visualization

1. AP018690
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
AP018690_1 70029-72641 Orphan I-F
43 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
AP018690_2 219108-219334 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
AP018690_3 494054-494132 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
AP018690_3 3.1|494078|31|AP018690|CRISPRCasFinder 494078-494108 31 NZ_CP053956 Bacillus tropicus strain FDAARGOS_782 plasmid unnamed1 26509-26539 6 0.806
AP018690_3 3.1|494078|31|AP018690|CRISPRCasFinder 494078-494108 31 NZ_CP053956 Bacillus tropicus strain FDAARGOS_782 plasmid unnamed1 27019-27049 6 0.806
AP018690_3 3.1|494078|31|AP018690|CRISPRCasFinder 494078-494108 31 NZ_CP053956 Bacillus tropicus strain FDAARGOS_782 plasmid unnamed1 27529-27559 6 0.806
AP018690_3 3.1|494078|31|AP018690|CRISPRCasFinder 494078-494108 31 NZ_CP015591 Bacillus cereus strain AR156 plasmid pAR41, complete sequence 274-304 6 0.806
AP018690_3 3.1|494078|31|AP018690|CRISPRCasFinder 494078-494108 31 NZ_CP009627 Bacillus cereus ATCC 4342 plasmid pBGM, complete sequence 26847-26877 6 0.806
AP018690_3 3.1|494078|31|AP018690|CRISPRCasFinder 494078-494108 31 NZ_CP009627 Bacillus cereus ATCC 4342 plasmid pBGM, complete sequence 27357-27387 6 0.806
AP018690_3 3.1|494078|31|AP018690|CRISPRCasFinder 494078-494108 31 NZ_CP009627 Bacillus cereus ATCC 4342 plasmid pBGM, complete sequence 27867-27897 6 0.806
AP018690_1 1.5|70297|32|AP018690|CRISPRCasFinder,CRT 70297-70328 32 NZ_CP036355 Bacillus sp. SYJ plasmid unnamed1, complete sequence 35347-35378 7 0.781
AP018690_1 1.5|70297|32|AP018690|CRISPRCasFinder,CRT 70297-70328 32 NZ_CP016317 Bacillus cereus strain M3 plasmid pBCM301, complete sequence 100987-101018 7 0.781
AP018690_1 1.5|70297|32|AP018690|CRISPRCasFinder,CRT 70297-70328 32 NC_005707 Bacillus cereus ATCC 10987 plasmid pBc10987, complete sequence 102226-102257 7 0.781
AP018690_1 1.10|70597|32|AP018690|CRISPRCasFinder,CRT 70597-70628 32 MN270892 Pectobacterium phage Wc4-1, complete genome 81941-81972 7 0.781
AP018690_1 1.10|70597|32|AP018690|CRISPRCasFinder,CRT 70597-70628 32 MN270891 Pectobacterium phage Wc4, complete genome 81941-81972 7 0.781
AP018690_1 1.10|70597|32|AP018690|CRISPRCasFinder,CRT 70597-70628 32 MK290738 Pectobacterium phage Arno18, complete genome 27224-27255 8 0.75
AP018690_1 1.10|70597|32|AP018690|CRISPRCasFinder,CRT 70597-70628 32 MK290737 Pectobacterium phage Arno162, complete genome 27754-27785 8 0.75
AP018690_1 1.11|70657|32|AP018690|CRISPRCasFinder,CRT 70657-70688 32 MN693224 Marine virus AFVG_25M317, complete genome 9151-9182 8 0.75
AP018690_1 1.11|70657|32|AP018690|CRISPRCasFinder,CRT 70657-70688 32 MN693583 Marine virus AFVG_25M274, complete genome 9133-9164 8 0.75
AP018690_1 1.38|72277|32|AP018690|CRISPRCasFinder,CRT,PILER-CR 72277-72308 32 JN377903 Aeromonas phage Aes512 DNA polymerase subunit, putative GIY-YIG homing endonuclease, DNA polymerase subunit, putative VSR endonuclease, DNA polymerase subunit, dCMP hydroxymethylase, initiator of head vertex, and DNA primase-helicase subunit genes, complete cds 2688-2719 8 0.75
AP018690_1 1.38|72277|32|AP018690|CRISPRCasFinder,CRT,PILER-CR 72277-72308 32 AP014129 Uncultured Mediterranean phage uvMED isolate uvMED-GF-C44-MedDCM-OCT-S34-C46, *** SEQUENCING IN PROGRESS *** 3557-3588 8 0.75
AP018690_1 1.38|72277|32|AP018690|CRISPRCasFinder,CRT,PILER-CR 72277-72308 32 NC_014635 Aeromonas phage phiAS4, complete genome 150588-150619 8 0.75
AP018690_1 1.38|72277|32|AP018690|CRISPRCasFinder,CRT,PILER-CR 72277-72308 32 JN377904 Aeromonas phage Aes517 DNA polymerase subunit, truncated putative GIY-YIG homing endonuclease, hypothetical protein, DNA polymerase subunit, putative VSR endonuclease, DNA polymerase subunit, dCMP hydroxymethylase, and initiator of head vertex genes, complete cds 2679-2710 8 0.75
AP018690_1 1.38|72277|32|AP018690|CRISPRCasFinder,CRT,PILER-CR 72277-72308 32 NC_019543 Aeromonas phage Aes508, complete genome 21061-21092 8 0.75
AP018690_1 1.43|72577|32|AP018690|CRISPRCasFinder,CRT 72577-72608 32 MK765584 Tortoise microvirus 34 isolate 34_SP_129, complete genome 2422-2453 8 0.75
AP018690_3 3.1|494078|31|AP018690|CRISPRCasFinder 494078-494108 31 MN693450 Marine virus AFVG_25M486, complete genome 25629-25659 8 0.742
AP018690_1 1.5|70297|32|AP018690|CRISPRCasFinder,CRT 70297-70328 32 NZ_CP033968 Cupriavidus pauculus strain FDAARGOS_614 plasmid unnamed1, complete sequence 97552-97583 9 0.719
AP018690_1 1.5|70297|32|AP018690|CRISPRCasFinder,CRT 70297-70328 32 NZ_CP037902 Cupriavidus metallidurans strain BS1 plasmid p1, complete sequence 244377-244408 9 0.719
AP018690_1 1.5|70297|32|AP018690|CRISPRCasFinder,CRT 70297-70328 32 NZ_CP043439 Cupriavidus campinensis strain MJ1 plasmid unnamed2, complete sequence 8833-8864 9 0.719
AP018690_1 1.10|70597|32|AP018690|CRISPRCasFinder,CRT 70597-70628 32 KX017520 Salmonella phage 64795_sal3, complete genome 14173-14204 9 0.719
AP018690_1 1.14|70837|32|AP018690|CRISPRCasFinder,CRT 70837-70868 32 NZ_CP049157 Caballeronia sp. SBC1 plasmid pSBC1_1, complete sequence 1913928-1913959 9 0.719
AP018690_1 1.14|70837|32|AP018690|CRISPRCasFinder,CRT 70837-70868 32 NZ_CP049317 Caballeronia sp. SBC2 plasmid pSBC2-1, complete sequence 1725403-1725434 9 0.719
AP018690_1 1.29|71737|32|AP018690|CRISPRCasFinder,CRT,PILER-CR 71737-71768 32 NC_020062 Rhizobium tropici CIAT 899 plasmid pRtrCIAT899c, complete sequence 1622275-1622306 9 0.719
AP018690_1 1.31|71857|32|AP018690|CRISPRCasFinder,CRT,PILER-CR 71857-71888 32 NZ_CP040803 Streptococcus salivarius strain LAB813 plasmid pSAL813, complete sequence 161498-161529 9 0.719
AP018690_1 1.35|72097|32|AP018690|CRISPRCasFinder,CRT,PILER-CR 72097-72128 32 MN694387 Marine virus AFVG_250M329, complete genome 34453-34484 9 0.719
AP018690_1 1.35|72097|32|AP018690|CRISPRCasFinder,CRT,PILER-CR 72097-72128 32 MN940411 Staphylococcus phage f2b1, partial genome 5441-5472 9 0.719
AP018690_1 1.35|72097|32|AP018690|CRISPRCasFinder,CRT,PILER-CR 72097-72128 32 MN693994 Marine virus AFVG_250M330, complete genome 34320-34351 9 0.719
AP018690_1 1.35|72097|32|AP018690|CRISPRCasFinder,CRT,PILER-CR 72097-72128 32 MN694767 Marine virus AFVG_250M328, complete genome 34467-34498 9 0.719
AP018690_1 1.41|72457|32|AP018690|CRISPRCasFinder,CRT 72457-72488 32 MK620899 Gordonia phage GodonK, complete genome 73785-73816 9 0.719
AP018690_1 1.3|70177|32|AP018690|CRISPRCasFinder,CRT 70177-70208 32 MK504442 Lactobacillus phage 3-SAC12, complete genome 10021-10052 10 0.688
AP018690_1 1.7|70417|32|AP018690|CRISPRCasFinder,CRT 70417-70448 32 MK448779 Streptococcus phage Javan497, complete genome 20018-20049 10 0.688
AP018690_1 1.7|70417|32|AP018690|CRISPRCasFinder,CRT 70417-70448 32 MK448976 Streptococcus phage Javan528, complete genome 20203-20234 10 0.688
AP018690_1 1.7|70417|32|AP018690|CRISPRCasFinder,CRT 70417-70448 32 MK448968 Streptococcus phage Javan512, complete genome 20018-20049 10 0.688
AP018690_1 1.7|70417|32|AP018690|CRISPRCasFinder,CRT 70417-70448 32 MK448797 Streptococcus phage Javan531, complete genome 20018-20049 10 0.688
AP018690_1 1.7|70417|32|AP018690|CRISPRCasFinder,CRT 70417-70448 32 NC_004589 Streptococcus prophage 315.6, complete genome 20115-20146 10 0.688
AP018690_1 1.11|70657|32|AP018690|CRISPRCasFinder,CRT 70657-70688 32 MN013077 Klebsiella phage vB_KaeM_KaOmega, complete genome 67929-67960 10 0.688
AP018690_1 1.14|70837|32|AP018690|CRISPRCasFinder,CRT 70837-70868 32 NZ_CP049160 Caballeronia sp. SBC1 plasmid pSBC1_4, complete sequence 59565-59596 10 0.688
AP018690_1 1.20|71197|32|AP018690|CRISPRCasFinder,CRT,PILER-CR 71197-71228 32 NZ_CP053574 Citrobacter sp. TSA-1 plasmid unnamed1, complete sequence 149810-149841 10 0.688
AP018690_1 1.22|71317|32|AP018690|CRISPRCasFinder,CRT,PILER-CR 71317-71348 32 MT684590 Streptomyces phage LilMartin, complete genome 20262-20293 10 0.688
AP018690_1 1.22|71317|32|AP018690|CRISPRCasFinder,CRT,PILER-CR 71317-71348 32 MT897905 Streptomyces phage MulchMansion, complete genome 20262-20293 10 0.688
AP018690_1 1.23|71377|32|AP018690|CRISPRCasFinder,CRT,PILER-CR 71377-71408 32 NZ_CP015322 Mesorhizobium amorphae CCNWGS0123 plasmid pM0123d, complete sequence 736352-736383 10 0.688
AP018690_1 1.34|72037|32|AP018690|CRISPRCasFinder,CRT 72037-72068 32 KM983334 Clostridium phage phiCTC2B, complete genome 25674-25705 10 0.688
AP018690_1 1.34|72037|32|AP018690|CRISPRCasFinder,CRT 72037-72068 32 KM983331 Clostridium phage phiCT19406B, complete genome 25674-25705 10 0.688
AP018690_1 1.35|72097|32|AP018690|CRISPRCasFinder,CRT,PILER-CR 72097-72128 32 CP033552 Acinetobacter nosocomialis strain 2014S01-097 plasmid p2014S01-097-2, complete sequence 15464-15495 10 0.688
AP018690_1 1.38|72277|32|AP018690|CRISPRCasFinder,CRT,PILER-CR 72277-72308 32 NZ_LR215005 Mycoplasma conjunctivae strain NCTC10147 plasmid 9 46174-46205 10 0.688
AP018690_1 1.38|72277|32|AP018690|CRISPRCasFinder,CRT,PILER-CR 72277-72308 32 NZ_CP028898 Gammaproteobacteria bacterium DM2 plasmid unnamed, complete sequence 21663-21694 10 0.688
AP018690_1 1.4|70237|32|AP018690|CRISPRCasFinder,CRT 70237-70268 32 NZ_CP021373 Rhizobium sp. ACO-34A plasmid pRACO34Ac, complete sequence 175084-175115 11 0.656
AP018690_1 1.40|72397|32|AP018690|CRISPRCasFinder,CRT,PILER-CR 72397-72428 32 MG592603 Vibrio phage 1.238.A._10N.261.52.F10, partial genome 24060-24091 11 0.656
AP018690_1 1.40|72397|32|AP018690|CRISPRCasFinder,CRT,PILER-CR 72397-72428 32 MG592610 Vibrio phage 1.245.O._10N.261.54.C7, partial genome 24507-24538 11 0.656
AP018690_1 1.40|72397|32|AP018690|CRISPRCasFinder,CRT,PILER-CR 72397-72428 32 MG592604 Vibrio phage 1.238.B._10N.261.52.F10, partial genome 24052-24083 11 0.656

1. spacer 3.1|494078|31|AP018690|CRISPRCasFinder matches to NZ_CP053956 (Bacillus tropicus strain FDAARGOS_782 plasmid unnamed1) position: , mismatch: 6, identity: 0.806

ttaaccatgagtatttaaattaaccatagct-	CRISPR spacer
atatccattagtatttaaattaa-caaagcaa	Protospacer
 ** **** ************** ** ***  

2. spacer 3.1|494078|31|AP018690|CRISPRCasFinder matches to NZ_CP053956 (Bacillus tropicus strain FDAARGOS_782 plasmid unnamed1) position: , mismatch: 6, identity: 0.806

ttaaccatgagtatttaaattaaccatagct-	CRISPR spacer
atatccattagtatttaaattaa-caaagcaa	Protospacer
 ** **** ************** ** ***  

3. spacer 3.1|494078|31|AP018690|CRISPRCasFinder matches to NZ_CP053956 (Bacillus tropicus strain FDAARGOS_782 plasmid unnamed1) position: , mismatch: 6, identity: 0.806

ttaaccatgagtatttaaattaaccatagct-	CRISPR spacer
atatccattagtatttaaattaa-caaagcaa	Protospacer
 ** **** ************** ** ***  

4. spacer 3.1|494078|31|AP018690|CRISPRCasFinder matches to NZ_CP015591 (Bacillus cereus strain AR156 plasmid pAR41, complete sequence) position: , mismatch: 6, identity: 0.806

ttaaccatgagtatttaaattaaccatagct-	CRISPR spacer
atatccattagtatttaaattaa-caaagcaa	Protospacer
 ** **** ************** ** ***  

5. spacer 3.1|494078|31|AP018690|CRISPRCasFinder matches to NZ_CP009627 (Bacillus cereus ATCC 4342 plasmid pBGM, complete sequence) position: , mismatch: 6, identity: 0.806

ttaaccatgagtatttaaattaaccatagct-	CRISPR spacer
atatccattagtatttaaattaa-caaagcaa	Protospacer
 ** **** ************** ** ***  

6. spacer 3.1|494078|31|AP018690|CRISPRCasFinder matches to NZ_CP009627 (Bacillus cereus ATCC 4342 plasmid pBGM, complete sequence) position: , mismatch: 6, identity: 0.806

ttaaccatgagtatttaaattaaccatagct-	CRISPR spacer
atatccattagtatttaaattaa-caaagcaa	Protospacer
 ** **** ************** ** ***  

7. spacer 3.1|494078|31|AP018690|CRISPRCasFinder matches to NZ_CP009627 (Bacillus cereus ATCC 4342 plasmid pBGM, complete sequence) position: , mismatch: 6, identity: 0.806

ttaaccatgagtatttaaattaaccatagct-	CRISPR spacer
atatccattagtatttaaattaa-caaagcaa	Protospacer
 ** **** ************** ** ***  

8. spacer 1.5|70297|32|AP018690|CRISPRCasFinder,CRT matches to NZ_CP036355 (Bacillus sp. SYJ plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

tttttcaccaagtgcaaacaatgcgcctaatt	CRISPR spacer
tttttcagcaagtgcagacaatgcgcgacgtg	Protospacer
******* ********.*********   .* 

9. spacer 1.5|70297|32|AP018690|CRISPRCasFinder,CRT matches to NZ_CP016317 (Bacillus cereus strain M3 plasmid pBCM301, complete sequence) position: , mismatch: 7, identity: 0.781

tttttcaccaagtgcaaacaatgcgcctaatt	CRISPR spacer
tttttcagcaagtgcagacaatgcgcgacgtg	Protospacer
******* ********.*********   .* 

10. spacer 1.5|70297|32|AP018690|CRISPRCasFinder,CRT matches to NC_005707 (Bacillus cereus ATCC 10987 plasmid pBc10987, complete sequence) position: , mismatch: 7, identity: 0.781

tttttcaccaagtgcaaacaatgcgcctaatt	CRISPR spacer
tttttcagcaagtgcagacaatgcgcgacgtg	Protospacer
******* ********.*********   .* 

11. spacer 1.10|70597|32|AP018690|CRISPRCasFinder,CRT matches to MN270892 (Pectobacterium phage Wc4-1, complete genome) position: , mismatch: 7, identity: 0.781

gttctttaggggagctaatacctccccttttt	CRISPR spacer
gtgtctatggggagttaacacctccccttttt	Protospacer
** ..*  ******.***.*************

12. spacer 1.10|70597|32|AP018690|CRISPRCasFinder,CRT matches to MN270891 (Pectobacterium phage Wc4, complete genome) position: , mismatch: 7, identity: 0.781

gttctttaggggagctaatacctccccttttt	CRISPR spacer
gtgtctatggggagttaacacctccccttttt	Protospacer
** ..*  ******.***.*************

13. spacer 1.10|70597|32|AP018690|CRISPRCasFinder,CRT matches to MK290738 (Pectobacterium phage Arno18, complete genome) position: , mismatch: 8, identity: 0.75

gttctttaggggagctaatacctccccttttt	CRISPR spacer
gtatcgatggggagttaacacctccccttttt	Protospacer
** ..   ******.***.*************

14. spacer 1.10|70597|32|AP018690|CRISPRCasFinder,CRT matches to MK290737 (Pectobacterium phage Arno162, complete genome) position: , mismatch: 8, identity: 0.75

gttctttaggggagctaatacctccccttttt	CRISPR spacer
gtatcgatggggagttaacacctccccttttt	Protospacer
** ..   ******.***.*************

15. spacer 1.11|70657|32|AP018690|CRISPRCasFinder,CRT matches to MN693224 (Marine virus AFVG_25M317, complete genome) position: , mismatch: 8, identity: 0.75

taatatgcttgttatggatagggagcgcggat	CRISPR spacer
taatatgcgtgttatggataaggtagaagcat	Protospacer
******** ***********.** . . * **

16. spacer 1.11|70657|32|AP018690|CRISPRCasFinder,CRT matches to MN693583 (Marine virus AFVG_25M274, complete genome) position: , mismatch: 8, identity: 0.75

taatatgcttgttatggatagggagcgcggat	CRISPR spacer
taatatgcgtgttatggataaggtagaagcat	Protospacer
******** ***********.** . . * **

17. spacer 1.38|72277|32|AP018690|CRISPRCasFinder,CRT,PILER-CR matches to JN377903 (Aeromonas phage Aes512 DNA polymerase subunit, putative GIY-YIG homing endonuclease, DNA polymerase subunit, putative VSR endonuclease, DNA polymerase subunit, dCMP hydroxymethylase, initiator of head vertex, and DNA primase-helicase subunit genes, complete cds) position: , mismatch: 8, identity: 0.75

ttgtggaacagaagaacaaaaac----cgcctttaa	CRISPR spacer
ttgtgaaaaagaagaacaaaaacgcaacacca----	Protospacer
*****.** **************    *.**     

18. spacer 1.38|72277|32|AP018690|CRISPRCasFinder,CRT,PILER-CR matches to AP014129 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C44-MedDCM-OCT-S34-C46, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 8, identity: 0.75

ttgtggaacagaagaacaaaaaccgcctttaa	CRISPR spacer
ttttggaacagaagaacaagaactaattaaaa	Protospacer
** ****************.***.. .*  **

19. spacer 1.38|72277|32|AP018690|CRISPRCasFinder,CRT,PILER-CR matches to NC_014635 (Aeromonas phage phiAS4, complete genome) position: , mismatch: 8, identity: 0.75

ttgtggaacagaagaacaaaaac----cgcctttaa	CRISPR spacer
ttgtgaaaaagaagaacaaaaacgcaacacca----	Protospacer
*****.** **************    *.**     

20. spacer 1.38|72277|32|AP018690|CRISPRCasFinder,CRT,PILER-CR matches to JN377904 (Aeromonas phage Aes517 DNA polymerase subunit, truncated putative GIY-YIG homing endonuclease, hypothetical protein, DNA polymerase subunit, putative VSR endonuclease, DNA polymerase subunit, dCMP hydroxymethylase, and initiator of head vertex genes, complete cds) position: , mismatch: 8, identity: 0.75

ttgtggaacagaagaacaaaaac----cgcctttaa	CRISPR spacer
ttgtgaaaaagaagaacaaaaacgcaacacca----	Protospacer
*****.** **************    *.**     

21. spacer 1.38|72277|32|AP018690|CRISPRCasFinder,CRT,PILER-CR matches to NC_019543 (Aeromonas phage Aes508, complete genome) position: , mismatch: 8, identity: 0.75

ttgtggaacagaagaacaaaaac----cgcctttaa	CRISPR spacer
ttgtgaaaaagaagaacaaaaacgcaacacca----	Protospacer
*****.** **************    *.**     

22. spacer 1.43|72577|32|AP018690|CRISPRCasFinder,CRT matches to MK765584 (Tortoise microvirus 34 isolate 34_SP_129, complete genome) position: , mismatch: 8, identity: 0.75

gaagaacgtggcgatgacgaata-----catcaaacg	CRISPR spacer
gaagaacgtggcggagacgaataagaatcttc-----	Protospacer
*************. ********     * **     

23. spacer 3.1|494078|31|AP018690|CRISPRCasFinder matches to MN693450 (Marine virus AFVG_25M486, complete genome) position: , mismatch: 8, identity: 0.742

ttaaccatgagtatttaaattaaccatagct	CRISPR spacer
ttgttgctgattatttaaattagccatagca	Protospacer
**. .  *** ***********.******* 

24. spacer 1.5|70297|32|AP018690|CRISPRCasFinder,CRT matches to NZ_CP033968 (Cupriavidus pauculus strain FDAARGOS_614 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

tttttcaccaagtgcaaacaatgcgcctaatt	CRISPR spacer
cttttcaccaggtgccaacaatgcaatgagtg	Protospacer
.*********.**** ********. . *.* 

25. spacer 1.5|70297|32|AP018690|CRISPRCasFinder,CRT matches to NZ_CP037902 (Cupriavidus metallidurans strain BS1 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.719

tttttcaccaagtgcaaacaatgcgcctaatt	CRISPR spacer
cttttcaccaggtgccaacaatgcaatgagtg	Protospacer
.*********.**** ********. . *.* 

26. spacer 1.5|70297|32|AP018690|CRISPRCasFinder,CRT matches to NZ_CP043439 (Cupriavidus campinensis strain MJ1 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

tttttcaccaagtgcaaacaatgcgcctaatt	CRISPR spacer
cttttcaccaggtgccaacaatgcaatgagtg	Protospacer
.*********.**** ********. . *.* 

27. spacer 1.10|70597|32|AP018690|CRISPRCasFinder,CRT matches to KX017520 (Salmonella phage 64795_sal3, complete genome) position: , mismatch: 9, identity: 0.719

gttctttaggggagctaatacctccccttttt	CRISPR spacer
tataaagaagggggctaatacccccccttttt	Protospacer
  *    *.***.*********.*********

28. spacer 1.14|70837|32|AP018690|CRISPRCasFinder,CRT matches to NZ_CP049157 (Caballeronia sp. SBC1 plasmid pSBC1_1, complete sequence) position: , mismatch: 9, identity: 0.719

tataccgtagcgttgagcatcggaaacaacag	CRISPR spacer
ttccacgtggccttgagcatcggaaacaccgc	Protospacer
* .  ***.** **************** *. 

29. spacer 1.14|70837|32|AP018690|CRISPRCasFinder,CRT matches to NZ_CP049317 (Caballeronia sp. SBC2 plasmid pSBC2-1, complete sequence) position: , mismatch: 9, identity: 0.719

tataccgtagcgttgagcatcggaaacaacag	CRISPR spacer
ttccacgtggccttgagcatcggaaacaccgc	Protospacer
* .  ***.** **************** *. 

30. spacer 1.29|71737|32|AP018690|CRISPRCasFinder,CRT,PILER-CR matches to NC_020062 (Rhizobium tropici CIAT 899 plasmid pRtrCIAT899c, complete sequence) position: , mismatch: 9, identity: 0.719

cacacgcaccggaatgccaaacacttccgcaa	CRISPR spacer
ctgatcgaccggaatgccgaagacttccgcgg	Protospacer
*  *.  ***********.** ********..

31. spacer 1.31|71857|32|AP018690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP040803 (Streptococcus salivarius strain LAB813 plasmid pSAL813, complete sequence) position: , mismatch: 9, identity: 0.719

caccctgaaaactggcaaacctcagctttcac	CRISPR spacer
ccttttctaaactgacaaacctcatctttcat	Protospacer
* ...*  ******.********* ******.

32. spacer 1.35|72097|32|AP018690|CRISPRCasFinder,CRT,PILER-CR matches to MN694387 (Marine virus AFVG_250M329, complete genome) position: , mismatch: 9, identity: 0.719

gtgcaagcattccaagaagttaagtataaaaa	CRISPR spacer
ggaagagcattccaagatggtaagtatactac	Protospacer
* . .************ * ********  * 

33. spacer 1.35|72097|32|AP018690|CRISPRCasFinder,CRT,PILER-CR matches to MN940411 (Staphylococcus phage f2b1, partial genome) position: , mismatch: 9, identity: 0.719

gtgcaagcattccaagaagttaagtataaaaa	CRISPR spacer
gaagatcgtttgcaagaagttaagaataaaaa	Protospacer
* . *    ** ************ *******

34. spacer 1.35|72097|32|AP018690|CRISPRCasFinder,CRT,PILER-CR matches to MN693994 (Marine virus AFVG_250M330, complete genome) position: , mismatch: 9, identity: 0.719

gtgcaagcattccaagaagttaagtataaaaa	CRISPR spacer
ggaagagcattccaagatggtaagtatactac	Protospacer
* . .************ * ********  * 

35. spacer 1.35|72097|32|AP018690|CRISPRCasFinder,CRT,PILER-CR matches to MN694767 (Marine virus AFVG_250M328, complete genome) position: , mismatch: 9, identity: 0.719

gtgcaagcattccaagaagttaagtataaaaa	CRISPR spacer
ggaagagcattccaagatggtaagtatactac	Protospacer
* . .************ * ********  * 

36. spacer 1.41|72457|32|AP018690|CRISPRCasFinder,CRT matches to MK620899 (Gordonia phage GodonK, complete genome) position: , mismatch: 9, identity: 0.719

accaaatcggtgcagctatgtgtgaactgatc	CRISPR spacer
agatacgtcgtgcaggtatgtgcgaactgatc	Protospacer
*   *  . ****** ******.*********

37. spacer 1.3|70177|32|AP018690|CRISPRCasFinder,CRT matches to MK504442 (Lactobacillus phage 3-SAC12, complete genome) position: , mismatch: 10, identity: 0.688

tttgaagatattgaacccatgaacatttcatg	CRISPR spacer
tttgaagatattgaaaacatgaacggcaacga	Protospacer
***************  *******. .    .

38. spacer 1.7|70417|32|AP018690|CRISPRCasFinder,CRT matches to MK448779 (Streptococcus phage Javan497, complete genome) position: , mismatch: 10, identity: 0.688

ttacttggcagttgaatattctaagcatgatc	CRISPR spacer
aaaagaagctgttgaatatcctaagcatgaat	Protospacer
  *   .** *********.********** .

39. spacer 1.7|70417|32|AP018690|CRISPRCasFinder,CRT matches to MK448976 (Streptococcus phage Javan528, complete genome) position: , mismatch: 10, identity: 0.688

ttacttggcagttgaatattctaagcatgatc	CRISPR spacer
aaaagaagctgttgaatatcctaagcatgaat	Protospacer
  *   .** *********.********** .

40. spacer 1.7|70417|32|AP018690|CRISPRCasFinder,CRT matches to MK448968 (Streptococcus phage Javan512, complete genome) position: , mismatch: 10, identity: 0.688

ttacttggcagttgaatattctaagcatgatc	CRISPR spacer
aaaagaagctgttgaatatcctaagcatgaat	Protospacer
  *   .** *********.********** .

41. spacer 1.7|70417|32|AP018690|CRISPRCasFinder,CRT matches to MK448797 (Streptococcus phage Javan531, complete genome) position: , mismatch: 10, identity: 0.688

ttacttggcagttgaatattctaagcatgatc	CRISPR spacer
aaaagaagctgttgaatatcctaagcatgaat	Protospacer
  *   .** *********.********** .

42. spacer 1.7|70417|32|AP018690|CRISPRCasFinder,CRT matches to NC_004589 (Streptococcus prophage 315.6, complete genome) position: , mismatch: 10, identity: 0.688

ttacttggcagttgaatattctaagcatgatc	CRISPR spacer
aaaagaagctgttgaatatcctaagcatgaat	Protospacer
  *   .** *********.********** .

43. spacer 1.11|70657|32|AP018690|CRISPRCasFinder,CRT matches to MN013077 (Klebsiella phage vB_KaeM_KaOmega, complete genome) position: , mismatch: 10, identity: 0.688

taatatgcttgttatggatagggagcgcggat	CRISPR spacer
tgtactgcttcttctggatagggagcgcccgg	Protospacer
*.   ***** ** **************  . 

44. spacer 1.14|70837|32|AP018690|CRISPRCasFinder,CRT matches to NZ_CP049160 (Caballeronia sp. SBC1 plasmid pSBC1_4, complete sequence) position: , mismatch: 10, identity: 0.688

tataccgtagcgttgagcatcggaaacaacag	CRISPR spacer
ccgaccgtagcgtcgagcttcggaaaggaact	Protospacer
.  **********.**** ******* .*   

45. spacer 1.20|71197|32|AP018690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP053574 (Citrobacter sp. TSA-1 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

gtcaaagctcatatattgcttgccgtctttaa	CRISPR spacer
cattccgctcatatattccttgccggcttcag	Protospacer
  .   *********** ******* ***.*.

46. spacer 1.22|71317|32|AP018690|CRISPRCasFinder,CRT,PILER-CR matches to MT684590 (Streptomyces phage LilMartin, complete genome) position: , mismatch: 10, identity: 0.688

ttgcgaatgttcgcaaccaataacaactactt	CRISPR spacer
gccgggcctttctcaaccaatatcaactactt	Protospacer
 .  *. . *** ********* *********

47. spacer 1.22|71317|32|AP018690|CRISPRCasFinder,CRT,PILER-CR matches to MT897905 (Streptomyces phage MulchMansion, complete genome) position: , mismatch: 10, identity: 0.688

ttgcgaatgttcgcaaccaataacaactactt	CRISPR spacer
gccgggcctttctcaaccaatatcaactactt	Protospacer
 .  *. . *** ********* *********

48. spacer 1.23|71377|32|AP018690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015322 (Mesorhizobium amorphae CCNWGS0123 plasmid pM0123d, complete sequence) position: , mismatch: 10, identity: 0.688

tatgttgtcggcaacatcgagcatcacatcac	CRISPR spacer
gggcttgtcgccagcatcgagcatcactttga	Protospacer
 .  ****** **.************* *.. 

49. spacer 1.34|72037|32|AP018690|CRISPRCasFinder,CRT matches to KM983334 (Clostridium phage phiCTC2B, complete genome) position: , mismatch: 10, identity: 0.688

ttgcaaagctggaataagtatagctggcataa	CRISPR spacer
agttaaagctggaataaaaatagctggtagtt	Protospacer
   .*************. ********.*   

50. spacer 1.34|72037|32|AP018690|CRISPRCasFinder,CRT matches to KM983331 (Clostridium phage phiCT19406B, complete genome) position: , mismatch: 10, identity: 0.688

ttgcaaagctggaataagtatagctggcataa	CRISPR spacer
agttaaagctggaataaaaatagctggtagtt	Protospacer
   .*************. ********.*   

51. spacer 1.35|72097|32|AP018690|CRISPRCasFinder,CRT,PILER-CR matches to CP033552 (Acinetobacter nosocomialis strain 2014S01-097 plasmid p2014S01-097-2, complete sequence) position: , mismatch: 10, identity: 0.688

gtgcaagcattccaagaagttaagtataaaaa	CRISPR spacer
tgattagctttccaagaagttcagtatattca	Protospacer
  .. *** ************ ******   *

52. spacer 1.38|72277|32|AP018690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR215005 (Mycoplasma conjunctivae strain NCTC10147 plasmid 9) position: , mismatch: 10, identity: 0.688

ttgtggaacagaagaacaaaaaccgcctttaa	CRISPR spacer
ttttggaaaagaagaacaaaaacgattatccg	Protospacer
** ***** ************** ... *. .

53. spacer 1.38|72277|32|AP018690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP028898 (Gammaproteobacteria bacterium DM2 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

ttgtggaacagaagaacaaaaaccgcctttaa	CRISPR spacer
ttggggaacagaagatcaaaaacacgggacat	Protospacer
*** *********** *******      .* 

54. spacer 1.4|70237|32|AP018690|CRISPRCasFinder,CRT matches to NZ_CP021373 (Rhizobium sp. ACO-34A plasmid pRACO34Ac, complete sequence) position: , mismatch: 11, identity: 0.656

tgattggtatccggatttttatcaacgaattt	CRISPR spacer
gacgaagtatccggatttctatcaaggaaggg	Protospacer
 .   .************.****** ***   

55. spacer 1.40|72397|32|AP018690|CRISPRCasFinder,CRT,PILER-CR matches to MG592603 (Vibrio phage 1.238.A._10N.261.52.F10, partial genome) position: , mismatch: 11, identity: 0.656

atcgcctgttgtgtgtttttagtgtgttacca	CRISPR spacer
gctatctgttgtgggtttttagtgagttcttc	Protospacer
.....******** ********** *** .. 

56. spacer 1.40|72397|32|AP018690|CRISPRCasFinder,CRT,PILER-CR matches to MG592610 (Vibrio phage 1.245.O._10N.261.54.C7, partial genome) position: , mismatch: 11, identity: 0.656

atcgcctgttgtgtgtttttagtgtgttacca	CRISPR spacer
gctatctgttgtgggtttttagtgagttcttc	Protospacer
.....******** ********** *** .. 

57. spacer 1.40|72397|32|AP018690|CRISPRCasFinder,CRT,PILER-CR matches to MG592604 (Vibrio phage 1.238.B._10N.261.52.F10, partial genome) position: , mismatch: 11, identity: 0.656

atcgcctgttgtgtgtttttagtgtgttacca	CRISPR spacer
gctatctgttgtgggtttttagtgagttcttc	Protospacer
.....******** ********** *** .. 

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. AP018689
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
AP018689_1 595173-595333 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
AP018689_2 2280758-2280831 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage