CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Prophage number
CP028541	Klebsiella pneumoniae strain WCHKP2 plasmid pKPC2_020002, complete sequence	0 crisprs	RT	3
CP028542	Klebsiella pneumoniae strain WCHKP2 chromosome, complete genome	2 crisprs	cas3,DEDDh,WYL,DinG,RT,csa3	15
CP028539	Klebsiella pneumoniae strain WCHKP2 plasmid p1_020002, complete sequence	0 crisprs	NA	0
CP028540	Klebsiella pneumoniae strain WCHKP2 plasmid p2_020002, complete sequence	0 crisprs	NA	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1796 : 18519

Escherichia_phage(60.0%)

protease,transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVZ92763.1\|1796_2450_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
AVZ92764.1\|2669_3134_+	mRNA interferase PemK	NA	NA	NA	NA
AVZ92765.1\|3130_3235_+	hypothetical protein	NA	NA	NA	NA
AVZ92766.1\|4444_5149_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AVZ92767.1\|5659_6535_+	class A extended-spectrum beta-lactamase CTX-M-65	A0A1B0VBP7	Salmonella_phage	6.8e-152	98.9
AVZ92768.1\|6614_7538_+\|transposase	IS5 family transposase	Q9MCT5	Escherichia_phage	2.2e-177	99.7
AVZ92769.1\|9288_9993_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AVZ92770.1\|11103_11808_+\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AVZ92771.1\|11873_12392_+	hypothetical protein	NA	NA	NA	NA
AVZ92772.1\|12396_12813_-	fosfomycin resistance glutathione transferase FosA3	Q2LI91	Bacillus_phage	2.0e-08	35.6
AVZ92773.1\|13198_13903_+\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AVZ92774.1\|14580_14769_-	hypothetical protein	NA	NA	NA	NA
AVZ92958.1\|14860_15397_+	recombinase family protein	Q1MVP4	Enterobacteria_phage	2.8e-84	100.0
AVZ92775.1\|15579_16440_+	class A broad-spectrum beta-lactamase TEM-1	Q1MVP3	Enterobacteria_phage	4.6e-161	100.0
AVZ92776.1\|16609_17365_+	16S rRNA (guanine(1405)-N(7))-methyltransferase RmtB1	NA	NA	NA	NA
AVZ92777.1\|17814_18519_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0

DBSCAN-SWA_2

73209 : 117049

Escherichia_phage(34.78%)

integrase,transposase

attL 76398:76412|attR 106435:106449

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVZ92839.1\|73209_73914_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AVZ92840.1\|75182_76064_-	carbapenem-hydrolyzing class A beta-lactamase KPC-2	A0A1B0VBP7	Salmonella_phage	2.2e-73	52.2
AVZ92841.1\|76339_77320_-\|transposase	IS481-like element ISKpn27 family transposase	A8RHK4	Spiroplasma_virus	2.9e-10	27.4
76398:76412	attL	NA	NA	NA	NA
AVZ92842.1\|77442_77916_-	recombinase family protein	Q1MVP4	Enterobacteria_phage	3.3e-76	99.3
AVZ92843.1\|77955_78660_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AVZ92844.1\|79928_80810_-	carbapenem-hydrolyzing class A beta-lactamase KPC-2	A0A1B0VBP7	Salmonella_phage	2.2e-73	52.2
AVZ92845.1\|81085_82066_-\|transposase	IS481-like element ISKpn27 family transposase	A8RHK4	Spiroplasma_virus	2.9e-10	27.4
AVZ92846.1\|82188_82662_-	recombinase family protein	Q1MVP4	Enterobacteria_phage	3.3e-76	99.3
AVZ92847.1\|82701_83406_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AVZ92848.1\|84674_85556_-	carbapenem-hydrolyzing class A beta-lactamase KPC-2	A0A1B0VBP7	Salmonella_phage	2.2e-73	52.2
AVZ92849.1\|85831_86812_-\|transposase	IS481-like element ISKpn27 family transposase	A8RHK4	Spiroplasma_virus	2.9e-10	27.4
AVZ92850.1\|86934_87408_-	recombinase family protein	Q1MVP4	Enterobacteria_phage	3.3e-76	99.3
AVZ92851.1\|87447_88152_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AVZ92852.1\|89463_90171_-	EAL domain-containing protein	NA	NA	NA	NA
AVZ92853.1\|90167_90404_-	mercury resistance protein	NA	NA	NA	NA
AVZ92854.1\|90400_90763_-	transcriptional regulator	NA	NA	NA	NA
AVZ92855.1\|90780_92475_-	mercury(II) reductase	A0A2K5B2C5	Erysipelothrix_phage	8.8e-39	27.6
AVZ92964.1\|92526_92949_-	mercury transport protein MerC	NA	NA	NA	NA
AVZ92856.1\|92984_93260_-	mercury resistance system periplasmic binding protein MerP	NA	NA	NA	NA
AVZ92857.1\|93273_93624_-	mercuric ion transporter MerT	NA	NA	NA	NA
AVZ92858.1\|93695_94130_+	mercuric resistance operon regulatory protein	NA	NA	NA	NA
AVZ92859.1\|94208_95213_+\|transposase	IS110-like element IS5075 family transposase	NA	NA	NA	NA
AVZ92860.1\|96746_97769_-	DNA helicase UvrD	NA	NA	NA	NA
AVZ92861.1\|97753_99316_-	ATP-dependent endonuclease	NA	NA	NA	NA
AVZ92862.1\|99389_99806_-	PIN domain-containing protein	NA	NA	NA	NA
AVZ92863.1\|99802_100033_-	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA
AVZ92864.1\|100016_100451_+	hypothetical protein	NA	NA	NA	NA
AVZ92865.1\|100611_101556_+	hypothetical protein	NA	NA	NA	NA
AVZ92965.1\|101634_101985_+	hypothetical protein	NA	NA	NA	NA
AVZ92866.1\|102042_102564_+	hypothetical protein	NA	NA	NA	NA
AVZ92867.1\|102609_102813_+	hypothetical protein	NA	NA	NA	NA
AVZ92868.1\|102842_103847_+	hypothetical protein	NA	NA	NA	NA
AVZ92869.1\|104030_104810_+\|integrase	phage integrase family protein	I3WFA4	Macacine_betaherpesvirus	5.4e-52	92.0
AVZ92870.1\|104855_105113_-	hypothetical protein	NA	NA	NA	NA
AVZ92871.1\|105890_106757_+	RepB family plasmid replication initiator protein	A0A222YYK1	Escherichia_phage	1.5e-23	31.1
106435:106449	attR	NA	NA	NA	NA
AVZ92872.1\|107866_109072_+	ParA family protein	A0A077SL49	Escherichia_phage	5.3e-163	69.3
AVZ92873.1\|109068_110046_+	ParB/RepB/Spo0J family partition protein	Q38420	Escherichia_phage	1.4e-86	53.8
AVZ92874.1\|110127_111399_-	translesion error-prone DNA polymerase V subunit UmuC	F1C5A5	Cronobacter_phage	7.5e-152	63.7
AVZ92875.1\|111398_111830_-	peptidase	A0A1W6JNS2	Morganella_phage	2.1e-29	53.3
AWT57758.1\|111988_112240_+	hypothetical protein	NA	NA	NA	NA
AWT57759.1\|112239_113724_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5
AVZ92876.1\|113972_114944_+	StbA family protein	A0A222YXF2	Escherichia_phage	1.1e-73	46.8
AVZ92877.1\|114946_115618_+	Mediator of plasmid stability	NA	NA	NA	NA
AVZ92878.1\|115680_115911_+	hypothetical protein	NA	NA	NA	NA
AVZ92879.1\|116347_117049_+	DNA methylase	A0A2I7RE86	Vibrio_phage	1.6e-26	36.2

DBSCAN-SWA_3

140504 : 169032

Escherichia_phage(27.78%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVZ92916.1\|140504_141209_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AVZ92917.1\|141334_141709_-	hypothetical protein	A0A248SL90	Klebsiella_phage	2.2e-27	62.7
AVZ92918.1\|142334_142694_-	hypothetical protein	NA	NA	NA	NA
AVZ92919.1\|142755_143079_-	theronine dehydrogenase	I3UM57	Rhodobacter_phage	6.0e-13	38.1
AVZ92920.1\|143075_143804_-	plasmid SOS inhibition protein A	NA	NA	NA	NA
AVZ92921.1\|143800_144232_-	conjugation system SOS inhibitor PsiB	NA	NA	NA	NA
AVZ92922.1\|146354_146585_-	DUF905 domain-containing protein	NA	NA	NA	NA
AVZ92923.1\|147562_147823_-	DNA polymerase III subunit theta	H9C187	Pectobacterium_phage	4.1e-12	46.2
AVZ92924.1\|148009_148201_-	hypothetical protein	NA	NA	NA	NA
AVZ92925.1\|148243_148750_-	antirestriction protein ArdA	A0A1I9S7Y0	Rhodococcus_phage	4.8e-09	31.8
AVZ92926.1\|149154_149934_-	hypothetical protein	NA	NA	NA	NA
AVZ92927.1\|149987_150407_-	DUF1380 domain-containing protein	NA	NA	NA	NA
AVZ92928.1\|150417_150639_-	hypothetical protein	NA	NA	NA	NA
AVZ92929.1\|150638_151316_-	DNA methylase	A0A2I7RE86	Vibrio_phage	1.6e-28	36.9
AVZ92930.1\|151674_152346_+	DNA breaking-rejoining protein	A0A2H4J5W2	uncultured_Caudovirales_phage	5.1e-83	61.7
AVZ92931.1\|152525_152948_+	peptidase	A0A1W6JNS2	Morganella_phage	3.1e-30	51.5
AVZ92932.1\|152947_154219_+	translesion error-prone DNA polymerase V subunit UmuC	F1C5A5	Cronobacter_phage	6.1e-154	63.0
AVZ92933.1\|154354_155326_-	ParB/RepB/Spo0J family partition protein	Q1MVJ4	Enterobacteria_phage	1.4e-113	68.9
AVZ92934.1\|155322_156528_-	ParA family protein	Q1MVJ3	Enterobacteria_phage	1.1e-205	89.2
AVZ92935.1\|156890_157523_+	LacI family DNA-binding transcriptional regulator	A0A1V0E035	Clostridioides_phage	2.5e-07	31.9
AVZ92936.1\|157576_157777_+	hypothetical protein	NA	NA	NA	NA
AVZ92937.1\|157923_158874_+\|transposase	Rpn family recombination-promoting nuclease/putative transposase	Q2A0A7	Sodalis_phage	6.6e-76	55.6
AVZ92938.1\|158870_159482_-	DUF2913 family protein	NA	NA	NA	NA
AVZ92970.1\|159478_159874_-	hypothetical protein	NA	NA	NA	NA
AVZ92939.1\|160387_161368_+\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	1.0e-185	99.4
AVZ92971.1\|162019_162577_+	hypothetical protein	NA	NA	NA	NA
AVZ92940.1\|163045_163750_+\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AVZ92941.1\|163882_164524_-	type A-2 chloramphenicol O-acetyltransferase CatII	G3CFL0	Escherichia_phage	7.3e-55	45.9
AVZ92972.1\|164673_165174_-	hypothetical protein	NA	NA	NA	NA
AVZ92942.1\|165253_165958_+\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AVZ92943.1\|165991_166483_-	hypothetical protein	NA	NA	NA	NA
AVZ92944.1\|166589_167327_+	resolvase	NA	NA	NA	NA
AVZ92945.1\|167323_167548_+	hypothetical protein	NA	NA	NA	NA
AVZ92946.1\|167669_167846_+	DUF4102 domain-containing protein	T1S9J3	Salmonella_phage	1.0e-06	68.6
AVZ92947.1\|168027_169032_-\|transposase	IS110-like element IS5075 family transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. CP028542

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: CP028542_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP028542_1

1261427-1261504

Orphan

Consensus_repeat	Method
AAGGCGTCAGCCGCCGCCCGGCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP028542_1

>merge|CP028542|1|1261427-1261504|CRISPRCasFinder
AAGGCGTCAGCCGCCGCCCGGCAAAATAACCGCGCAATAGCACCGTAGGCCGGGCAAGGCGTCAGCCGCCGCCCGGCA

>CP028542|1|1|1261427-1261504|CRISPRCasFinder
AAGGCGTCAGCCGCCGCCCGGCA	AAATAACCGCGCAATAGCACCGTAGGCCGGGC
AAGGCGTCAGCCGCCGCCCGGCA

Protein	Signature genes	Signature genes Name	Protein_function
CP028542.2\|AVZ98098.1\|1268317_1268497_-\|hypothetical-protein	unknown	unknown	unknown
CP028542.2\|AVZ94115.1\|1261656_1262133_-\|kinase-inhibitor	unknown	unknown	gnl\|CDD\|182339
CP028542.2\|AVZ94114.1\|1261123_1261393_-\|hypothetical-protein	unknown	unknown	unknown
CP028542.2\|AVZ94110.1\|1255317_1256043_+\|histidine-utilization-repressor	unknown	unknown	gnl\|CDD\|184961
CP028542.2\|AVZ94117.1\|1264743_1265901_+\|8-amino-7-oxononanoate-synthase	unknown	unknown	gnl\|CDD\|235655
CP028542.2\|AVZ94118.1\|1265884_1266640_+\|malonyl-[acyl-carrier-protein]-O-methyltransferase-BioC	unknown	unknown	gnl\|CDD\|182340
CP028542.2\|AVZ94108.1\|1251545_1252829_-\|putative-acyl-CoA-thioester-hydrolase	unknown	unknown	gnl\|CDD\|236709
CP028542.2\|AVZ94116.1\|1263706_1264747_+\|biotin-synthase	unknown	unknown	gnl\|CDD\|185063
CP028542.2\|AVZ94107.1\|1249926_1250850_-\|acyltransferase	unknown	unknown	gnl\|CDD\|225813
CP028542.2\|AVZ94122.1\|1268729_1270751_+\|excinuclease-ABC-subunit-B	unknown	unknown	gnl\|CDD\|235395
CP028542.2\|AVZ94113.1\|1259495_1260878_+\|amino-acid-permease	unknown	unknown	gnl\|CDD\|182566
CP028542.2\|AVZ98096.1\|1253085_1254303_+\|imidazolonepropionase	unknown	unknown	gnl\|CDD\|236478
CP028542.2\|AVZ94120.1\|1267296_1268019_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|223487
CP028542.2\|AVZ94119.1\|1266632_1267355_+\|ATP-dependent-dethiobiotin-synthetase-BioD	unknown	unknown	gnl\|CDD\|234625
CP028542.2\|AVZ94111.1\|1256185_1257874_+\|urocanate-hydratase	unknown	unknown	gnl\|CDD\|235448
CP028542.2\|AVZ94106.1\|1249403_1249910_+\|hypothetical-protein	unknown	unknown	unknown
CP028542.2\|AVZ94112.1\|1257870_1259397_+\|histidine-ammonia-lyase	unknown	unknown	gnl\|CDD\|236484
CP028542.2\|AVZ94109.1\|1254299_1255256_+\|formimidoylglutamase	unknown	unknown	gnl\|CDD\|234974
CP028542.2\|AVZ98097.1\|1262203_1263493_-\|adenosylmethionine--8-amino-7-oxononanoate-transaminase	unknown	unknown	gnl\|CDD\|181189
CP028542.2\|AVZ94121.1\|1268105_1268318_-\|dTDP-4-dehydrorhamnose-reductase	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP028542.2\|AVZ94115.1\|1261656_1262133_-\|kinase-inhibitor	gnl\|CDD\|182339	PRK10257, PRK10257, putative kinase inhibitor protein; Provisional.	7.58373e-117
CP028542.2\|AVZ94110.1\|1255317_1256043_+\|histidine-utilization-repressor	gnl\|CDD\|184961	PRK14999, PRK14999, histidine utilization repressor; Provisional.	3.37417e-172
CP028542.2\|AVZ94117.1\|1264743_1265901_+\|8-amino-7-oxononanoate-synthase	gnl\|CDD\|235655	PRK05958, PRK05958, 8-amino-7-oxononanoate synthase; Reviewed.	0
CP028542.2\|AVZ94118.1\|1265884_1266640_+\|malonyl-[acyl-carrier-protein]-O-methyltransferase-BioC	gnl\|CDD\|182340	PRK10258, PRK10258, biotin biosynthesis protein BioC; Provisional.	1.7976e-160
CP028542.2\|AVZ94108.1\|1251545_1252829_-\|putative-acyl-CoA-thioester-hydrolase	gnl\|CDD\|236709	PRK10531, PRK10531, putative acyl-CoA thioester hydrolase.	0
CP028542.2\|AVZ94116.1\|1263706_1264747_+\|biotin-synthase	gnl\|CDD\|185063	PRK15108, PRK15108, biotin synthase; Provisional.	0
CP028542.2\|AVZ94107.1\|1249926_1250850_-\|acyltransferase	gnl\|CDD\|225813	COG3274, COG3274, Predicted O-acyltransferase [General function prediction only].	6.63632e-09
CP028542.2\|AVZ94122.1\|1268729_1270751_+\|excinuclease-ABC-subunit-B	gnl\|CDD\|235395	PRK05298, PRK05298, excinuclease ABC subunit UvrB.	0
CP028542.2\|AVZ94113.1\|1259495_1260878_+\|amino-acid-permease	gnl\|CDD\|182566	PRK10580, proY, putative proline-specific permease; Provisional.	0
CP028542.2\|AVZ98096.1\|1253085_1254303_+\|imidazolonepropionase	gnl\|CDD\|236478	PRK09356, PRK09356, imidazolonepropionase; Validated.	0
CP028542.2\|AVZ94120.1\|1267296_1268019_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|223487	COG0410, LivF, ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism].	3.17026e-74
CP028542.2\|AVZ94119.1\|1266632_1267355_+\|ATP-dependent-dethiobiotin-synthetase-BioD	gnl\|CDD\|234625	PRK00090, bioD, ATP-dependent dethiobiotin synthetase BioD.	4.52132e-105
CP028542.2\|AVZ94111.1\|1256185_1257874_+\|urocanate-hydratase	gnl\|CDD\|235448	PRK05414, PRK05414, urocanate hydratase; Provisional.	0
CP028542.2\|AVZ94112.1\|1257870_1259397_+\|histidine-ammonia-lyase	gnl\|CDD\|236484	PRK09367, PRK09367, histidine ammonia-lyase; Provisional.	0
CP028542.2\|AVZ94109.1\|1254299_1255256_+\|formimidoylglutamase	gnl\|CDD\|234974	PRK01722, PRK01722, formimidoylglutamase; Provisional.	8.10638e-178
CP028542.2\|AVZ98097.1\|1262203_1263493_-\|adenosylmethionine--8-amino-7-oxononanoate-transaminase	gnl\|CDD\|181189	PRK07986, PRK07986, adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated.	0

>CP028542.2|AVZ94114.1|1261123_1261393_-|hypothetical-protein
MAAKHGAAETAGAGGLNIAETFPEGRGSPHGCGLRAVFCKDAASARPEACRDKSKAPRSGDVAGRSPGVQGAAATGRPLCAPCSMRNIT
>CP028542.2|AVZ94113.1|1259495_1260878_+|amino-acid-permease
MQQQHKPHLLRGLNARHIRFIALGSAIGTGLFYGSASAIKAAGPAVLLAYLIGGAAVFIVMRALGEMAVRNPVSGSFGSYARQYLGPLAGFITGWTYTFEMVIVALADVTAFGIYMGLWYPDVPRWIWILSIIFFIGAMNLCNVRVFGEMEFWLSLVKVVAIIAMMLAGAGIIFFGFGHSFPATGLENLWSHGGFAPNGWQGVIASLGIVMFAFGGVEIIGVTAAEAKDPKKVIPQAINTIPLRIILFYVCTLAVLMAIFPWNSFGEQGSPFVLIFDGLGIPAAATILNIIVISASISAINSDIFGAGRMMYGMSKEGLAPKSFQRIASNGVPWMTVVVMGGALLAAVVLNYLIPEQVFVLIASLAAFATVWVWLMILLSHFAMRRGLSAEERSQIAFPIPFWPVAPLLTLLFMGLVIAVLGMFAETRMALIAGLVWLGLLTVVWYARVRKTALQVATEQ
>CP028542.2|AVZ94112.1|1257870_1259397_+|histidine-ammonia-lyase
MKSLTLIPGQLSLSQLRDVYSHPVNITLDSGAFAAIDESVACVNAILAEGRTAYGINTGFGLLAQTRISTEDLENLQRSLVLSHAAGVGEPLDDDLTRLIMVLKINSLSRGFSGIRLSVIQALIGLVNAGVTPWIPAKGSVGASGDLAPLAHMSLTLLGEGKARVRGGEWLPATEALRQVGLEPITLAAKEGLALLNGTQASTAFALRGLFEAEDLFASAVVCGALTTEAALGSRRPFDARIHEVRGQRGQIDAAALYRHLLTDDSAISQSHHNCSKVQDPYSLRCQPQVMGACLTQIRQAAEVLLAEANAVSDNPLVFAAENDVISGGNFHAEPVAMAADNIALAIAEIGSLSERRIALMMDSHMSQLPPFLVKNGGVNSGFMIAQVTAAALASENKALSHPHSVDSLPTSANQEDHVSMAPAAGRRLWAMAENTRGVLAVEWLAAAQGLDMREGLTTSPLLEEARHLLRERVPHYTQDRYFAPDIDNAIALLAARHLTRLLPAVLH
>CP028542.2|AVZ94111.1|1256185_1257874_+|urocanate-hydratase
MSQSKYRQLDVRAPRGTTLTAKSWLTEAPLRMLMNNLDPDVAENPHELVVYGGIGRAARNWECYDAIVKALKNLESDETLLVQSGKPVGVFKTHENSPRVLIANSNLVPHWATWEHFNELDAKGLAMYGQMTAGSWIYIGSQGIVQGTYETFVEAGRQHYQGSLKGRWVLTAGLGGMGGAQPLAATLAGACSLNIECQQSRIDFRLRTRYVDEQATSLDDALARIKKYTAEGRAISIALCGNAAEIVPELVKRGVRPDMVTDQTSAHDPLHGYLPKGWSWEEYQQKAESDPQGTILAAKRSMADHVQAMLAFHEMGVPTFDYGNNIRQMAQEVGVSNAFDFPGFVPAYIRPLFCRGIGPFRWVALSGDPQDIYKTDAKVKEIIKDDQHLHHWLDMARERISFQGLPARICWVGLEWRQKLGLAFNEMVRSGEVSAPIVIGRDHLDSGSVASPNRETEAMRDGSDAVSDWPLLNALLNTASGATWVSLHHGGGVGMGFSQHSGMVIVCDGTDEAAARIARVLHNDPATGVMRHADAGYEIAIECAAEQGLNLPMVAATQGNAK
>CP028542.2|AVZ94110.1|1255317_1256043_+|histidine-utilization-repressor
MFAQQPRSAPAPFYEKVKQAISEKIHSGVWRPHDRIPSEAELVAQFGFSRMTINRALRELTDEGLLVRLQGVGTFVAEPKGQSALFEVRSIAAEIVARHHQHRCEVLLLEETRADHIQATALSVPEGTRIFHSLMVHYENEVPVQIEDRCVNAAVVPDYLHQDYTATTPHDYLSLIAPLTEGEHIVEAVQATAEECALLHIHAHDPCLLIRRRTWSTTHIVSHARLLFPGSRYRLQGRFGS
>CP028542.2|AVZ94109.1|1254299_1255256_+|formimidoylglutamase
MMLWQATPASLWQGRDDSAEAPNALRLFQTIVRAERFAPQEMPGDIALLGFACDEGVRRNKGRTGAADGPATLRRALANMASHQGHDRCVDMGTISVDGEQLEAAHQALREAVADCQRVGKRTLVLGGGHETAFGHGAGVLDAFPGEKVGIINLDAHLDLRFADCASSGTPFRQLALECDAQQRGFHYTCIGVSRAANTQALWDEAARRQVAIVEDLEVLTAFETRVLPELERNIAQFDRLYLTIDLDVLPAREMPAVSAPAALGVPLATLLRIVEPLCRNGKLQAVDLVEFNPLFDIDGQGARAAARLAWQIAHWWR
>CP028542.2|AVZ98096.1|1253085_1254303_+|imidazolonepropionase
MTEATSELVIWRNGRLATLNPDHAQPYGLLERHALLVRDGRIAAIVAEDDVPSGRSIDLEGRLVTPGLIDCHTHLVFGGSRAQEWEQRLNGVSYQTISASGGGINSTVRATRDSSEAELLALAQPRLERLLREGVTTLEIKSGYGLDLPNERKMLRVARQLADHNGVELSATLLSAHATPPEYQGDADGYITLVCETILPTLWQEGLFESVDVFCENVGFSPQQTERVFQAAQALGIPVKGHVEQLSSLGGAQLVSRYHGLSADHIEYLTEEGVAAMRESGTVAALLPGAFYFLNETRKPPVELLRKYQVPMAVATDFNPGTSPFASLHLAMNMACVKFGLTPEEAWAGVTRHAARALGRQASHGQLAPGFVANFAIWDAEHPVEMVYEPGRSPLWHRVVQGELQ
>CP028542.2|AVZ94108.1|1251545_1252829_-|putative-acyl-CoA-thioester-hydrolase
MNTYSVSRLALALAFGVTLSACSSTPADQQPSTQTAPGTTARPILNAEEAKNFTPAAYFQSLAPNAAAWTPSAISLPAQPDFIVGPAGTQGVTHTTIQAAVDAAIARHSNRRLYIAIMPGEYPGTVYVPAAPGALTLYGTGDKPIDVKISEAIDSEMDRNTWRRLVNPGGKYMPGKPAWYMFDSCQSKSAATIGVMCSAVFWSQNNGLQLQNLTIANNLGDSVDAGTHQAVALRSDGDQVQINKVNILGRQNTFFVTNSGVQNRLQDNRQTRTLVTNSYIEGDVDIVSGRGAVVFDNTDFRVVNSRTQKEAYVFAPATLKSVTYGFLATNSRFTASGDNVAQLGRALDVDGNSNGQVVIRDSAINEGFNIAQPWAAAVGSGRPFSGNTGSADDKGNLQRNLNDNGFNRMWEYNNRGVGSTVVAEPKQ
>CP028542.2|AVZ94107.1|1249926_1250850_-|acyltransferase
MTAVTFFTIYNTWDRFDYDYHWILGLLTFISTIATPLFFVVAGYLDAQTRHDANWQIGKIKSVVIVFLFWVTVYYVWEPYQRGYLIQPWFIFALIVIYTFHPLIAWLSQRRGLFFAVLLTLLCCSYGYDLLSVIYPDRHLFSLPPQYRLWTWLLFYLTGQLFNDPKVAEWIRNPQVIKGSIIALPFVYLFTWFYERHFFFALFKADRNAFILTGSQIYILIVLLVIAANAVQFKKNREWKEAVLATVSKAMTGVYILHYSVFHLLVMLIPVHSLATKLGVIALTFVLSVLISLAALSSTLLRKVITL
>CP028542.2|AVZ94106.1|1249403_1249910_+|hypothetical-protein
MRGKSVMLLAGLASLAQANELNLYSVNTGSYVYHLTNNHGQYTENFENHFFSVERKFSADSKYSLLLGTMNNSFNDRCLALGVRRDWYHSGSGWTFKGVYGYTGEFFFDAFEHCGDHGSYKDFKDATGIGFSPYIYHAIQYNFTDYFAVESGIIIPSVFVISIQWSFR
>CP028542.2|AVZ94115.1|1261656_1262133_-|kinase-inhibitor
MKLISHDLQDGGKLPNRHVFNGMGYDGDNISPHLMWDDVPAGTKSFVVTCYDPDAPTGSGWWHWVVANLPADTRVLPQGAGSGQAELPEEAVQTRTDFGKAGYGGAAPPKGETHRYIFTVHALDVEKIEVDAEASGAMVGFNVHFHSLASASITALFS
>CP028542.2|AVZ98097.1|1262203_1263493_-|adenosylmethionine--8-amino-7-oxononanoate-transaminase
MTLDDLAFDRRHIWHPYTSMTSPLPVYPVVSAHGCELSLAGGEQLVDGMSSWWAAIHGYNHPRLNAALKGQIDQMSHVMFGGITHPPAVALCRQLVAMTPASLECVFLADSGSVAVEVAMKMALQYWQAKGEPRRRFLTFRNGYHGDTFGAMSVCDPQNSMHSLWQGYLPDNLFAPAPQSRFDGEWDEMDMVPFARLMAAHRHEIAAVILEPIVQGAGGMRMYHPEWLKRVRKMCDREGILLIADEIATGFGRTGKLFACEHAGITADILCLGKALTGGTMTLSAAITTRTVAETISNGEAGCFMHGPTFMGNPLACAVAGESLRLLESGEWQPQVTAIEAQLQAELAPARGSALVADVRVLGAIGVVETRRPVNMAALQRFFVEQGVWIRPFGRLIYLMPPYIITPEQLTRLTRAVNQAVQDETFFSE
>CP028542.2|AVZ94116.1|1263706_1264747_+|biotin-synthase
MAHQPRWTMSQVTELFNKPLIDLLFEAQQIHRQHFDPRQVQVSTLLSIKTGACPEDCKYCPQSARYKTGLEAERLMEVEQVLESARQAKNAGSTRFCMGAAWKNPNDRDMPYLEQMVKGVKALGLESCMTLGTLTDSQAQRLAEAGLDYYNHNLDTSPEFYGNIITTRTYQERLDTLDKVRDAGIKVCSGGIVGLGESVKDRAGLLLQLANLPTPPESVPINMLVKVKGTPLADNDDVDAFDFIRTIAIARIMMPTSYVRLSAGREQMNEQTQAMCFMAGANSIFYGCKLLTTPNPEEDKDLQLFRKLGINPQQTAVLEGDNEQQQRLEQALLTPDTEEYYNAAAL
>CP028542.2|AVZ94117.1|1264743_1265901_+|8-amino-7-oxononanoate-synthase
MSWQQRIDRALDERRAAEAFRRRLPVTHGAGRWLEREGERWLNFSSNDYLGLSQHPAIIAAWQQGATRYGVGAGGSGHVSGYSEAHRALEEALVDWLGYPRALLFISGFAANQALIAALVEKDDRIVADRLSHASLLEAASLSPAQLRRFTHNDPQQLAQLLAKPLAGEQLAVTEGIFSMDGDSAPLAAIHAATQAAGAVLLVDDAHGVGVVGDEGRGSCAAQAVRPELLVVTFGKAFGVSGAAVLCDEAMADYLLQFARHLIYSTAMPPAQAVALSAALGIIRSDEGRQRRDILAARIRQFREGMGKVSLGLTDSVSAIQPLIVGDNARALNLACRLRDAGCWATAIRPPTVPVGSARLRLTLTAAHHAEDINRLLEVLHGHSE
>CP028542.2|AVZ94118.1|1265884_1266640_+|malonyl-[acyl-carrier-protein]-O-methyltransferase-BioC
MATVNKQAVAAAFGRAASGYTQHDELQRRCADLLLRQLARRDFAQVLDAGCGPGSMSRYWREAGSVVTALDLSAGMLAQAQRNDAAQHYLLGDIEALPLPDACVDLAWSNLAVQWCDDLRAAIGELYRVARPGGRVAFSTLLADSLPELNQAWQAIDDRPHANRFLSEAAVRAALSGLRATGEVHQISLPFADALSAMRSLKGIGATHLHQGRTAAPLGRGKLRELQLAWPQRQGICPLTYSLFTGVIERD
>CP028542.2|AVZ94119.1|1266632_1267355_+|ATP-dependent-dethiobiotin-synthetase-BioD
MTKRFFVTGTDTEVGKTIASSALLQAANLLGFHTAGYKPVASGSELTGDGLRNEDALALQRHSRVALRYDQVNPYTFAEPTSPHIISADEGRPIAAARLSSGLRELEGLADWVLVEGAGGWFTPLSDSLTFADWAQAEQLPVILVVGVKLGCINHAMLTAQAVRQAGLPLAGWIANDVQPPGKRHAEYLATLKNRLAAPFLGEIPWLADIAQRDDLGQYLDLRALDPALSTAPAAAHPAP
>CP028542.2|AVZ94120.1|1267296_1268019_-|ATP-binding-cassette-domain-containing-protein
MLNLQAVNHFYGNQHSLWNVDLVLRPGECIGVLGREGMGKTTLVNCIAGHLPVASGRMTWHDIGAPPQDLTPLSAQSRSAIGIGYVPQDKRIFSQLSVEENLHIALAAGKPGANASGGEIYEHFPELYALRQRKGASLSDDDQYQLALARALIVQPRLLILDEPSRGRGPRCLQKLADLLLRLNRDIGLTVLLAEQHLPFIRRVADRFCVLHRGRNVAEGDIMALDEPLLAQWITPDPAP
>CP028542.2|AVZ94121.1|1268105_1268318_-|dTDP-4-dehydrorhamnose-reductase
MDNCPQPKTTAARRLSPFAVNRVAKNFYRTIFDNYPLKAARFLLLFAPPFSVGHRKSAAPALTRPDGIGV
>CP028542.2|AVZ98098.1|1268317_1268497_-|hypothetical-protein
MKLLWQQMTLFLHPLILSNKLIFKIFKEKTPFAPIQPQAAYALACRRFSNSNTQGYPQE
>CP028542.2|AVZ94122.1|1268729_1270751_+|excinuclease-ABC-subunit-B
MSKSFVLHSAFRPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPTMVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIEQMRLSATKALLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTVGMLIDQRAILRRLAELQYTRNDQAFQRGTFRVRGEVIDVFPAESDDIALRIELFDEEVERLSLFDPLTGHVEGTVPRYTIYPKTHYVTPRERIVQAMEEIKLELAERRKVLLANNKLLEEQRLTQRTQFDLEMMNELGYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGLLVIDESHVTVPQIGGMYRGDRARKETLVEYGFRLPSALDNRPMKFEEFEALAPQTIYVSATPGAYELDKSGGEVVDQVVRPTGLLDPIIEVRPVATQVDDLLSEIRLRTAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDIDTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAARNVNGKAILYGDKITPSMAKAIGETERRREKQQRYNEEHGIVPQGLNKKVVDILQLGQGLAKTKAKGRGKAKAVEPAGLSAVDMTPKALQQKIHELEGQMMQHAQNLEFEEAAQIRDQLHQLRELFIAAS

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Crispr_ID: CP028542_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP028542_2

4636748-4636842

Orphan

Consensus_repeat	Method
ACTATGGTTTTTATGGTTTTTATT	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP028542_2

>merge|CP028542|2|4636748-4636842|CRISPRCasFinder
TTAATGGTCACTATGGTTTTTATGGTTTTTATTCGCTGAACTGCCCGGGAGTGATATATCTCTGATTTATGACTGTGGTTTTTATGGTTTTTATT

>CP028542|2|2|4636748-4636842|CRISPRCasFinder
TTAATGGTCACTATGGTTTTTATG	GTTTTTATTCGCTGAACTGCCCGGGAGTGATATATCTCTGATTTATG
ACTGTGGTTTTTATGGTTTTTATT

Protein	Signature genes	Signature genes Name	Protein_function
CP028542.2\|AVZ97282.1\|4639329_4640157_-\|co-chaperone-DjlA	unknown	unknown	gnl\|CDD\|236512
CP028542.2\|AVZ97286.1\|4645081_4645903_+\|ribosomal-RNA-small-subunit-methyltransferase-A	unknown	unknown	gnl\|CDD\|234708
CP028542.2\|AVZ97274.1\|4627506_4628202_+\|L-ribulose-5-phosphate-4-epimerase	unknown	unknown	gnl\|CDD\|236181
CP028542.2\|AVZ97283.1\|4640400_4642749_+\|LPS-assembly-protein-LptD	unknown	unknown	gnl\|CDD\|235158
CP028542.2\|AVZ97281.1\|4638598_4639297_+\|response-regulator	unknown	unknown	gnl\|CDD\|226931
CP028542.2\|AVZ97276.1\|4630922_4633829_+\|RNA-polymerase-associated-protein-RapA	unknown	unknown	gnl\|CDD\|235319
CP028542.2\|AVZ97279.1\|4635294_4636659_-\|malate-permease	unknown	unknown	gnl\|CDD\|377030
CP028542.2\|AVZ97280.1\|4636983_4638609_+\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|225827
CP028542.2\|AVZ97275.1\|4628377_4630735_+\|DNA-polymerase-II	unknown	unknown	gnl\|CDD\|235595
CP028542.2\|AVZ98245.1\|4635077_4635266_+\|hypothetical-protein	unknown	unknown	unknown
CP028542.2\|AVZ97284.1\|4642803_4644090_+\|peptidylprolyl-isomerase-SurA	unknown	unknown	gnl\|CDD\|236758
CP028542.2\|AVZ97285.1\|4644095_4645085_+\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	unknown	unknown	gnl\|CDD\|234696
CP028542.2\|AVZ97277.1\|4633841_4634501_+\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	unknown	unknown	gnl\|CDD\|236659
CP028542.2\|AVZ97273.1\|4625866_4627369_+\|L-arabinose-isomerase	unknown	unknown	gnl\|CDD\|179503
CP028542.2\|AVZ97289.1\|4647088_4647292_-\|hypothetical-protein	unknown	unknown	unknown
CP028542.2\|AVZ97278.1\|4634575_4635115_-\|citrate-lyase-holo-[acyl-carrier-protein]-synthase	unknown	unknown	gnl\|CDD\|163145
CP028542.2\|AVZ97272.1\|4624146_4625856_+\|ribulokinase	unknown	unknown	gnl\|CDD\|235221
CP028542.2\|AVZ97271.1\|4622963_4623809_-\|arabinose-operon-transcriptional-regulator-AraC	unknown	unknown	gnl\|CDD\|236717
CP028542.2\|AVZ97288.1\|4646287_4647136_+\|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)	unknown	unknown	gnl\|CDD\|273208
CP028542.2\|AVZ97287.1\|4645905_4646283_+\|Co2+/Mg2+-efflux-protein-ApaG	unknown	unknown	gnl\|CDD\|180098

Protein	Function_ID	Function_description	E-value
CP028542.2\|AVZ97282.1\|4639329_4640157_-\|co-chaperone-DjlA	gnl\|CDD\|236512	PRK09430, djlA, co-chaperone DjlA.	2.63694e-164
CP028542.2\|AVZ97286.1\|4645081_4645903_+\|ribosomal-RNA-small-subunit-methyltransferase-A	gnl\|CDD\|234708	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA.	3.65731e-147
CP028542.2\|AVZ97274.1\|4627506_4628202_+\|L-ribulose-5-phosphate-4-epimerase	gnl\|CDD\|236181	PRK08193, araD, L-ribulose-5-phosphate 4-epimerase AraD.	0
CP028542.2\|AVZ97283.1\|4640400_4642749_+\|LPS-assembly-protein-LptD	gnl\|CDD\|235158	PRK03761, PRK03761, LPS assembly outer membrane complex protein LptD; Provisional.	0
CP028542.2\|AVZ97281.1\|4638598_4639297_+\|response-regulator	gnl\|CDD\|226931	COG4565, CitB, Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms].	5.03078e-66
CP028542.2\|AVZ97276.1\|4630922_4633829_+\|RNA-polymerase-associated-protein-RapA	gnl\|CDD\|235319	PRK04914, PRK04914, RNA polymerase-associated protein RapA.	0
CP028542.2\|AVZ97279.1\|4635294_4636659_-\|malate-permease	gnl\|CDD\|377030	pfam03390, 2HCT, 2-hydroxycarboxylate transporter family. The 2-hydroxycarboxylate transporter family is a family of secondary transporters found exclusively in the bacterial kingdom. They function in the metabolism of the di- and tricarboxylates malate and citrate, mostly in fermentative pathways involving decarboxylation of malate or oxaloacetate.	4.87969e-169
CP028542.2\|AVZ97280.1\|4636983_4638609_+\|sensor-histidine-kinase	gnl\|CDD\|225827	COG3290, CitA, Signal transduction histidine kinase regulating citrate/malate metabolism [Signal transduction mechanisms].	6.55037e-173
CP028542.2\|AVZ97275.1\|4628377_4630735_+\|DNA-polymerase-II	gnl\|CDD\|235595	PRK05762, PRK05762, DNA polymerase II; Reviewed.	0
CP028542.2\|AVZ97284.1\|4642803_4644090_+\|peptidylprolyl-isomerase-SurA	gnl\|CDD\|236758	PRK10770, PRK10770, peptidyl-prolyl cis-trans isomerase SurA; Provisional.	0
CP028542.2\|AVZ97285.1\|4644095_4645085_+\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	gnl\|CDD\|234696	PRK00232, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed.	0
CP028542.2\|AVZ97277.1\|4633841_4634501_+\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	gnl\|CDD\|236659	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA.	2.4454e-161
CP028542.2\|AVZ97273.1\|4625866_4627369_+\|L-arabinose-isomerase	gnl\|CDD\|179503	PRK02929, PRK02929, L-arabinose isomerase; Provisional.	0
CP028542.2\|AVZ97278.1\|4634575_4635115_-\|citrate-lyase-holo-[acyl-carrier-protein]-synthase	gnl\|CDD\|163145	TIGR03124, citrate_citX, holo-ACP synthase CitX. Members of this protein family are the CitX protein, or CitX domain of the CitXG bifunctional protein, of the citrate lyase system. CitX transfers the prosthetic group 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA to the citrate lyase gamma chain, an acyl carrier protein. This enzyme may be designated holo-ACP synthase, holo-citrate lyase synthase, or apo-citrate lyase phosphoribosyl-dephospho-CoA transferase. In a few genera, including Haemophilus, this protein occurs as a fusion protein with CitG (2.7.8.25), an enzyme involved in prosthetic group biosynthesis. This CitX family is easily separated from the holo-ACP synthases of other enzyme systems. [Energy metabolism, Fermentation, Protein fate, Protein modification and repair].	5.54697e-86
CP028542.2\|AVZ97272.1\|4624146_4625856_+\|ribulokinase	gnl\|CDD\|235221	PRK04123, PRK04123, ribulokinase; Provisional.	0
CP028542.2\|AVZ97271.1\|4622963_4623809_-\|arabinose-operon-transcriptional-regulator-AraC	gnl\|CDD\|236717	PRK10572, PRK10572, arabinose operon transcriptional regulator AraC.	0
CP028542.2\|AVZ97288.1\|4646287_4647136_+\|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)	gnl\|CDD\|273208	TIGR00668, Bis5'-nucleosyl-tetraphosphatase_symmetrical, bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Diadenosine 5',5"'-P1,P4-tetraphosphate (Ap4A) is a regulatory metabolite of stress conditions. It is hydrolyzed to two ADP by this enzyme. Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase. [Cellular processes, Adaptations to atypical conditions].	0
CP028542.2\|AVZ97287.1\|4645905_4646283_+\|Co2+/Mg2+-efflux-protein-ApaG	gnl\|CDD\|180098	PRK05461, apaG, CO2+/MG2+ efflux protein ApaG; Reviewed.	7.84855e-74

>CP028542.2|AVZ97279.1|4635294_4636659_-|malate-permease
MSTTDNAFSATLEPIDTPKTTLKQRWWHIMDNWKVGIVPLPLFLLAGGLIALDCLGGKLPSDIVVMVATLAFFGFACGEFGKRLPVLGKLGAAAICATFIPSALVHYGLLPDVVIESTTKFYKSTNILYLYICCIIVGSIMSMNRTTLIQGFLKIFFPMLCGEVVGMLVGIGVGTLLGMEPFQVFFFIVLPIMAGGVGEGAIPLSMGYAALMHMEQGVALGRVLPMVMLGSLTAIVISGCLNQLGKRFPHLTGEGQLMPNRSHETRSLSESEGVSGKTDVGTLASGALLAVLLYMMGMLGHKLIGLPAPVGMLFLAVLLKLANVVSPRLQEGSQMVYKFFRTAVTYPILFAVGVAITPWQELVNAFTLTNLLVIVSTVSALVATGFLVGKKIGMHPIDVAIVSCCQSGQGGTGDVAILTAGNRMSLMPFAQIATRIGGAINVSLGLLFLSHYLA
>CP028542.2|AVZ98245.1|4635077_4635266_+|hypothetical-protein
MLTPAWAGVSTDINSSPTYDKYDSAWTVMMMVAIADRALIVTLNAEHLGYRTQIFSAFCSGK
>CP028542.2|AVZ97278.1|4634575_4635115_-|citrate-lyase-holo-[acyl-carrier-protein]-synthase
MSVDTPAQAGVSIDALLAAKEQRAARQADWLAHYQQPVISLTLVTPGAVKDSIRYRNMMGVALQACDQLLWKHRWQTLDRQVLWLPTGPEALWCVAHPASEIKAMCSTLEQSHPLGRLWDIDVICPQNGLVGRQSLGESQRRCLLCDEPAHACARSRRHDTDLVVARVEQMIDAWFARD
>CP028542.2|AVZ97277.1|4633841_4634501_+|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA
MAMENYNPPQDPWLVILYQDEHIMVVNKPSGLLSVPGRLEEHKDSVMTRIQRDFPQAESVHRLDMATSGVIVVALNKAAERELKRQFREREPKKQYVARVWGHPQPAEGLVDLPLICDWPNRPKQKVCYETGKAAQTEYEVLEYAEDNTARVRLKPITGRSHQLRVHMLALGHPILGDRFYATPEALAMAPRLLLHAETLTITHPAYGNAMTFRAPIDF
>CP028542.2|AVZ97276.1|4630922_4633829_+|RNA-polymerase-associated-protein-RapA
MPFTLGQRWISDTESELGLGTVVALDARMVTLLFPAIGENRLYSRNDSPITRVMFNPGDTITSHEGWQLHVDKVNEENGLLSYTGTRLDTQEANVTLREVLLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKFQSEQYRMPWSGLRGQRTSLIPHQLHIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIVVPETLQHQWLVEMLRRFNLRFSLFDDERYAEAQHDAYNPFETEQLVICSLDFVRRSKQRLEHLCDAEWDLMVVDEAHHLVWSEEAPSREYQAIEQLAERVPGILLLTATPEQLGMESHFARLRLLDPNRFHDFEQFVEEQQNYRPVADAVALLLAGNKLSDSELNTLGDLIGEQDIEPLLQAANSDREDAQAARQELISMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIRLPLPTQYQTAIKVSGIMGARKTAEERARDMLYPEQIYQEFEGDTGTWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASNLVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTVYDSVHDELINYLAAPESIDGFDDLIKSCRQQHDALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTSLIAFSMNLFDIVGINQDDRGENLIVLTPSDHMLVPDFPGLPEDGCTITFERDVALSREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLLELIYVVEAQAPKQLQLNRFLPATPVRMLLDKNGNNLAAQVEFESFNRQLSAVNRHTGSKLVNAVQQDVHAILQQGEAQIAKAAQGLIDAARNEADEKLTAELSRLEALKAVNPNIRDDELAGIESNRQQVMDALAQAGWRLDALRLIVVTHQ
>CP028542.2|AVZ97275.1|4628377_4630735_+|DNA-polymerase-II
MTQPRAGFLLTRHWRDTPQGTELSFWLATDDGPLQVTLPPQESVAFIPEAQRAQAERLLQGEKGLRFAPLALKDFHRQPIVGLYCRAHRQLMRLEKMLRDSGVTVYEGDIRPPERYLMERFITAPVWVEGETRGSQLVNARMKPNPDYRPPLKWVSLDIETSRHGELYCIGLEGCGQRVVYMLGPEPETPPDVDFELVFIASRPLLLEKLNAWFAEHDPDVLIGWNVVQFDLRVLQKHAERYRIPLRLGRGNSELEWREHGFKNGVFFAQANGRLIIDGIDALKSAFWNFSSFSLEAVARELLGEGKAIDNPWDRMDEIDRRFHEDKPALAIYNLQDCELVTRIFHKTEIMPFLLERATVNGLPADRHGGSVAAFSHLYFPRMHRLGYVAPNLGDVPPQASPGGYVMDSRPGLYDSVLVLDYKSLYPSIIRTFLIDPVGLIEGLAQPDDQHSIEGFLGARFSRDKHCLPGIVSQIWHGRDEAKRQHNKPLSQALKIIMNAFYGVLGTSACRFFDPRLASSITMRGHAIMRQTKALIEAKGYDVIYGDTDSTFVWLKRPHSEAQAAEIGRELVSHVNAWWAQELSKSQLTSALELEYETHFCRFLMPTIRGADTGSKKRYAGMIQEGDAQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNQPYQDYVRETIARLMNGELDEQLVYRKRLRRPLAEYQRNVPPHVRAARLADEHNLKLGRAQQYQQRGTIKYVWTTSGPEPVDYQQSPLDYDHYLTKQLQPVAEGILPFVNDDFATIVTGQLGLF
>CP028542.2|AVZ97274.1|4627506_4628202_+|L-ribulose-5-phosphate-4-epimerase
MLEDLKRQVLEANLALPKHNLVTLTWGNVSAVDREKGVFVIKPSGVDYRVMTADDMVVVSLESGEVVEGNKKPSSDTPTHRLLYQAFPTLGGIVHTHSRHATIWAQAGQSIPATGTTHADYFYGPVPCTRLMTDAEINGDYEWETGNVIVETFRQQGIDPAQMPGVLVHSHGPFAWGKNAEDAVHNAIVLEEIAYMGIFCRQLAPQLPAMQQTLLDKHYLRKHGAKAYYGQ
>CP028542.2|AVZ97273.1|4625866_4627369_+|L-arabinose-isomerase
MTIFDNYEVWFVIGSQHLYGPEALRQVTKHAEHVVNSLNAEAKLPCKLVLKPLGTTPDEITHICRDANYDDKCAGLVVWLHTFSPAKMWINGLTILNKPLLQFHTQYNAALPWDSIDMDFMNLNQTAHGGREFGFIGARMRQQHSVVTGHWQDKEAHQRIGGWMRQAVSKQDTRHLKVCRFGDNMREVAVTDGDKVAAQIKFGFSVNTWAVGDLVQVVNSISDGDISALVDEYESSYRLTPAAQVHGEKRQNVLDAARIELGMKRFLEQGGFHAFTTTFEDLHGLKQLPGLAVQRLMQQGYGFAGEGDWKTAALLRIMKVMSTGLQGGTSFMEDYTYHFDNGNDLVLGSHMLEVCPTIATVEKPILDVQPLGIGGKADPARLIFNTQTGPAIVASLIDLGDRFRLLVNTIETVPTPHDLPKLPVANALWKAQPDLRTASEAWIIAGGAHHTVFSHALNLDDMRQFAELHDIELTVIDNDTRLPSFKDALRWNEVYYGSKR
>CP028542.2|AVZ97272.1|4624146_4625856_+|ribulokinase
MAIAIGLDFGSDSVRALAVECASGAELATSVEWYPRWREGQYCDGANNRFRHHPRDYIESMEAALKSVLASLSAEQRADVVGIGVDSTGSTPAPVDAEGNVLALREEFADNPNAMFVLWKDHTAVEEAEAITRLCHQPGKEDYSRYIGGIYSSEWFWAKILHVTREDSAVAQAAASWVELCDWVPALLSGTTRPQDLRRGRCSAGHKSLWHESWGGLPPASFFDELDPIINQHLAWPLFTDTWTADVPVGTLSAEWAQRLGLSQSVAISGGAFDCHMGAVGAGAQPNALVKVIGTSTCDILIADKESVGERTVKGICGQVDGSVVPHFIGMEAGQSAFGDIYAWFGRILGWPLEQLAQQQPALREQIKASQKQLLPALTEAWANNPSLEHLPVVLDWFNGRRTPNANQRLKGVITDLNLATDAPALFGGLIAATAFGARAIMECFTEQGIPVNNVMALGGIARKNQVIMQACCDVLNRPLQIVASDQCCALGAAIFAAVAAGVYDDIPAAQQRMASQVETTLQPRPAQAQRFEQLYQRYQQWSVSAEQHYLPSAAKAEKAPQSKAALTH
>CP028542.2|AVZ97271.1|4622963_4623809_-|arabinose-operon-transcriptional-regulator-AraC
MAETQNDPLLPGYSFNAHLVTGLTPIEAQGYLDFFIDRPLGMKGYILNLTIRGEGVINNHGEQFVCRPGDMLLFPPGEIHHYGRHPDASEWYHQWVYFRPRAYWHEWLNWPTIFAQTGFFRPDEQWQARFGELFGQIVDAGQGAGRYSELLAINLLEQLLLRRMEAINESLHPPLDNRVREACQYISDHLADSHFDIASVAQHVCLSPSRLSHLFRQQLGVSVLGWREDQRISQAKLLLSTTRMPIATVGRNVGFEDQLYFSRVFKKCTGASPSEFRAGCE
>CP028542.2|AVZ97280.1|4636983_4638609_+|sensor-histidine-kinase
MKLSFQYKLFISLVAFFSVLFIALGIYYYFDASRQLYQEMSARAKIQAEEIALMPNLRQQVSRHDPQAIQAFMQQIAAHSDASFIVIGDRQGVHLFHSVHPEWVGTRLVGGDNQAVLEGKSITTIRKGGLGVSLRSKTPIVDDAGRVIGIVSVGYLTSYLDSITLTKVINIFIAAVLLLIALFIFSWYFTRSIKKQIFSLEPREIGLLVRQQKAMMESIFEGVIVIDRQRRIEVINHAARSLLGLSQPARQLRGQSIDSVISPQPFFASGDMLERDTHDELCRFNQLTVLASRVRIMLENTLQGWVITFRDRNEINALTAQLSQVKRYVDNLRIMRHEQLNRMTTLSGLLHMGHYDEAIRYIQAQSEHAQELLDFISSHFHSPTLCGLLLGKATRAREKGVALSFDPACRIDRPLPSLMESELISIIGNLLDNAIEATQRAELPHEPVEVLIQLNARELIIEVADRGVGIRPDIRERIFERGVTTKTRGDHGIGLYLIEHYVTQAGGTIEVADNAPRGTIFTLFIPADAHACPQPEAHDAS
>CP028542.2|AVZ97281.1|4638598_4639297_+|response-regulator
MHHDLVDVLIIEDESELARLHAELVQKHPRLRLAGMAASLAQARQLLHATPPQLVLLDNYLPDGKGVTLMTDPALATSQCSVIFITAASDMETCSQAIRNGAFDYILKPVSWKRLSQSLERFIQFYDQQREWKIVDQQNVDSLYQLQAKNYRVDSGSKGIEEKTLALVQGLFSDREAHCFSVDEVVSAAGLSKTTARRYLEHGVETGFLEVEMLYGKIGHPRRLYRRAKVKS
>CP028542.2|AVZ97282.1|4639329_4640157_-|co-chaperone-DjlA
MQYLGKVIGVAVALLMGGGFWGVVLGFLVGHMFDRARSRRLNLFANQQERQSLFFSTTFEVMGHLTKSKGRVTEADIHVANVLMDRMNLHGASRTAAQQAFRDGKADNYPLREKMRQLRSVCFGRFDLIRMFLEIQLQAAFADGELHPNEREVLFVIADELGISRAQFDQFLRMMQGGAQFGGGSQQRSYGQHGGNAGWQQAQRGPTLEDACNVLGVKPTDDAATVKRAYRKLMNEHHPDKLVAKGLPPEMMEMAKQKAQEIQKAWELIKEQRGF
>CP028542.2|AVZ97283.1|4640400_4642749_+|LPS-assembly-protein-LptD
MKKRIPSLLATMIASALYSQQGLAADLATQCMLGVPSYDRPLVEGRPGDLPVTINADHAKGNYPDNAVFTGNVDINQGNSRLRADEVQLHQQQAAGQAQPVRTVDALGNVHYDDNQVILKGPKAWSNLNTKDTNVWQGDYQMVGRQGRGTADLMKQRGENRYTILENGSFTSCLPGSDTWSVVGSEVIHDREEQVAEIWNARFKLGSVPIFYSPYLQLPVGDKRRSGFLIPNAKYSTKNGVEFSLPYYWNIAPNFDATITPHYMNKRGGVMWENEFRYLTQLGSGLTEFDYLPSDKVYEDDHSSDSNSRRWLFYWNHSGVIDQVWRLNADYTKVSDPDYFNDFSSKYGSSTDGYATQKFSAGYVNQNFDATVSTKQFQVFDRESSNSYSAEPQLDVNYYQNDVGPFDTHLYGQVAHFVNSNNNMPEATRVHFEPTINLPLSNGWGSLNTEAKLLATHYQQSNLDKYNAANGTDYKESVSRVMPQFKVDGKMVFERDLQEGFTQTLEPRVQYLYVPYRDQSEIGNYDSTLLQSDYTGLFRDRTYSGLDRIASANQVTTGLTSRVYDAAAVERFNISVGQIYYFTESRTGDDNINWENNDTTGSLVWAGDTYWRIADEWGLRGGIQYDTRLDNVATGNGTIEYRRDENRLVQLNYRYASPEYIQATLPSYSTAAQYKQGISQVGMTASWPIVDRWSVVGAYYYDTNTRKAANQMLGVQYNSCCYAIRLGYERKVNGWNSNDNGGESKYDNTFGINIELRGLSSNYGLGTQQMLRSNILPYQSSL
>CP028542.2|AVZ97284.1|4642803_4644090_+|peptidylprolyl-isomerase-SurA
MKNWKTLLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAGQAGQQLPDDATLRHQILERLIMDQIVLQMGQKMGVKISDDQLDQAIANIAKQNNMTLDQMRSRLAYEGINYNTYRNQIRKEMLISEVRNNEVRRRITVLPQEVEALAKQIGDQNDASTELNLSHILIPLPENPTSDEVAAAQEQANSIVEQARNGANFGKLAITYSADQQALKGGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFHILKVNDLRGGTQNISVTEVHARHILLKPSPIMNDAQAQAKLEQIAAEIKSGKITFAQAAKTYSEDPGSANQGGDLGWATPDIFDPAFRDALMRLNKGQTSGPVHSSFGWHLIELLDSRQVDRTDAAQKDRAYRMLMNRKFSEEAATWMQEQRASAYVKILSN
>CP028542.2|AVZ97285.1|4644095_4645085_+|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA
MPETRKVVITPGEPAGIGPDLVVQLAQRDWPVELVICADGALLTDRAKRLGLPLSLLPYDPAQPPVPQRAGTLTLLNVPLNVPAEPGVLNVQNGAYVVETLARACDGCLSGEFAALVTGPVHKGNINDAGIAFTGHTEFFEERAKASKVVMMLATEELRVALVTTHLPLKAISEAITPELLREIITILDHDLRTKFGIAQPHVLVCGLNPHAGEGGHMGTEEIDTIIPVLEEMRAKGMNLSGPLPADTLFQPKYLDHADAVLAMYHDQGLPVLKYQGFGRGVNITLGLPFIRTSVDHGTALELAGQGKADVGSFITALNLAIKMIVNTQ
>CP028542.2|AVZ97286.1|4645081_4645903_+|ribosomal-RNA-small-subunit-methyltransferase-A
MNNRVHQGHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALTEPVGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTMNFGELAEKMGQPLRVFGNLPYNISTPLMFHLFSYTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYCQVIPVLEVPPSAFTPPPKVDSAVVRLVPHSTMPYPVKEIRVLSRITTEAFNQRRKTIRNSLGNLFSVEVLTELGIDPAMRAENISVAQYCLMANWLSDNLPTKES
>CP028542.2|AVZ97287.1|4645905_4646283_+|Co2+/Mg2+-efflux-protein-ApaG
MIHSPRVCVQVQSVYIESQSSPEEERYVFAYTVTIRNLGRSQVQLLGRYWLITNGHGRETEVQGEGVVGEQPHIPAGGEYQYTSGAVIETPLGTMQGHYEMIDIDGAPFRIEIPVFRLAVPTLIH
>CP028542.2|AVZ97288.1|4646287_4647136_+|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)
MSTYLIGDVHGCYDELIALLAQVEFDPRRDTLWLTGDLVARGPGSLEVLRYVKSLGDSVRLVLGNHDLHLLAVFAGISRNKPKDRLKPLLEAPDADELLNWLRRQPLLQVDEEKKLVMAHAGITPQWDLETAQQCARDVEAVLSSDSYPFFLDAMYGDMPNHWSNELSGLARLRFISNAFTRMRYCFPNGQLDMYSKEAPEDAPAPLKPWFAIPGPVSNAYSIAFGHWASLEGRGTPEGIYALDTGCCWGGELTCLRWEDKQYFTQPSNRQKSLDEGEAVAS
>CP028542.2|AVZ97289.1|4647088_4647292_-|hypothetical-protein
MFPVAGFVFFLKRSPGRQIAHKRRSGKALAATRQNDAAGSPDKAQRAAIREESGRDGFAFVEAFLPV

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

451769 : 533552

uncultured_Caudovirales_phage(55.0%)

tRNA,capsid,head,portal,protease,tail,terminase,transposase,integrase

attL 469377:469394|attR 485372:485389

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVZ93396.1\|451769_452717_-\|tRNA	methionyl-tRNA formyltransferase	E3SNR5	Prochlorococcus_phage	2.2e-07	37.2
AVZ93397.1\|452731_453241_-	peptide deformylase	E3SLL2	Synechococcus_phage	2.6e-18	40.3
AVZ93398.1\|453369_454494_+	DNA-protecting protein DprA	NA	NA	NA	NA
AVZ93399.1\|454465_454939_+	DUF494 domain-containing protein	NA	NA	NA	NA
AVZ93400.1\|454964_455507_+	hypothetical protein	NA	NA	NA	NA
AVZ93401.1\|455511_456084_+	L-threonylcarbamoyladenylate synthase type 1 TsaC	NA	NA	NA	NA
AVZ93402.1\|456087_456906_+	shikimate dehydrogenase	NA	NA	NA	NA
AVZ93403.1\|456902_457160_+	DUF1488 domain-containing protein	NA	NA	NA	NA
AVZ98055.1\|457135_457690_-	gamma carbonic anhydrase family protein	NA	NA	NA	NA
AVZ93404.1\|463485_463707_-	hypothetical protein	NA	NA	NA	NA
AVZ93405.1\|464000_467111_-	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA
AVZ93406.1\|467123_468263_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
AVZ93407.1\|468641_469292_+	acrEF/envCD operon transcriptional regulator	NA	NA	NA	NA
469377:469394	attL	NA	NA	NA	NA
AVZ93408.1\|469567_470794_+\|integrase	site-specific integrase	A0A2H4JB45	uncultured_Caudovirales_phage	1.8e-150	62.2
AVZ93409.1\|470886_471828_+	hypothetical protein	NA	NA	NA	NA
AVZ93410.1\|472009_472294_+	AlpA family phage regulatory protein	NA	NA	NA	NA
AVZ93411.1\|472304_473084_+	hypothetical protein	Q8HA02	Enterobacteria_phage	6.2e-40	51.5
AVZ93412.1\|473207_473402_-	toxin-antitoxin system HicB family antitoxin	NA	NA	NA	NA
AVZ98056.1\|473535_473805_+	host cell division inhibitor Icd-like protein	A0A2H4JGW3	uncultured_Caudovirales_phage	2.4e-44	94.4
AVZ93413.1\|473797_473986_+	hypothetical protein	NA	NA	NA	NA
AVZ93414.1\|473978_474293_+	hypothetical protein	NA	NA	NA	NA
AVZ93415.1\|474289_474658_+	hypothetical protein	A0A2H4JCX7	uncultured_Caudovirales_phage	3.7e-51	81.1
AVZ93416.1\|474654_475020_+	hypothetical protein	NA	NA	NA	NA
AVZ93417.1\|475019_477155_+	DUF927 domain-containing protein	A0A1W6JPG0	Morganella_phage	3.4e-205	62.4
AVZ93418.1\|477497_477833_+	hypothetical protein	NA	NA	NA	NA
AVZ93419.1\|477881_478394_-	hypothetical protein	NA	NA	NA	NA
AVZ93420.1\|478657_479824_+\|capsid	phage major capsid protein	A0A2H4JED2	uncultured_Caudovirales_phage	9.8e-207	95.9
AVZ93421.1\|479875_480436_+\|head,protease	HK97 family phage prohead protease	A0A2H4JB68	uncultured_Caudovirales_phage	1.2e-98	95.7
AVZ93422.1\|480437_481679_+\|portal	phage portal protein	A0A2H4JFJ9	uncultured_Caudovirales_phage	1.0e-230	96.5
AVZ93423.1\|481675_482011_+\|head,tail	head-tail adaptor	A0A2H4JHK5	uncultured_Caudovirales_phage	3.7e-26	57.8
AVZ93424.1\|482007_482307_+\|head,tail	phage gp6-like head-tail connector protein	A0A2H4JD08	uncultured_Caudovirales_phage	3.4e-39	80.8
AVZ93425.1\|482306_482750_+	HNH endonuclease	A0A2H4JAS8	uncultured_Caudovirales_phage	2.8e-77	91.8
AVZ93426.1\|482876_483068_+\|terminase	terminase	NA	NA	NA	NA
AVZ93427.1\|483025_483382_+\|terminase	phage terminase small subunit P27 family	A0A2H4JHS3	uncultured_Caudovirales_phage	5.5e-60	99.2
AVZ93428.1\|483365_485027_+\|terminase	terminase large subunit	A0A2H4JB64	uncultured_Caudovirales_phage	0.0e+00	98.0
AVZ93429.1\|485029_485221_+	hypothetical protein	NA	NA	NA	NA
AVZ93430.1\|485374_485671_-	Fis family transcriptional regulator	NA	NA	NA	NA
485372:485389	attR	NA	NA	NA	NA
AVZ93431.1\|485695_486661_-\|tRNA	tRNA dihydrouridine synthase DusB	NA	NA	NA	NA
AVZ93432.1\|486818_487013_-	hypothetical protein	NA	NA	NA	NA
AVZ93433.1\|487018_487900_-	50S ribosomal protein L11 methyltransferase	NA	NA	NA	NA
AVZ93434.1\|487911_489363_-	sodium/panthothenate symporter	NA	NA	NA	NA
AVZ93435.1\|489352_489595_-	DUF997 family protein	NA	NA	NA	NA
AVZ93436.1\|489705_491055_-	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA
AVZ93437.1\|491065_491533_-	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA
AVZ93438.1\|491555_492008_-	type II 3-dehydroquinate dehydratase	NA	NA	NA	NA
AVZ93439.1\|492231_492840_-	protein-methionine-sulfoxide reductase heme-binding subunit MsrQ	NA	NA	NA	NA
AVZ93440.1\|492839_493841_-	protein-methionine-sulfoxide reductase catalytic subunit MsrP	NA	NA	NA	NA
AVZ93441.1\|494069_494261_+	hypothetical protein	NA	NA	NA	NA
AVZ93442.1\|494340_496281_+	RNase E specificity factor CsrD	NA	NA	NA	NA
AVZ93443.1\|496402_496609_-	hypothetical protein	NA	NA	NA	NA
AVZ93444.1\|496586_497630_+	rod shape-determining protein	F2Y0P3	Organic_Lake_phycodnavirus	6.7e-05	22.3
AVZ93445.1\|497700_498693_+	rod shape-determining protein MreC	NA	NA	NA	NA
AVZ93446.1\|498692_499181_+	rod shape-determining protein MreD	NA	NA	NA	NA
AVZ93447.1\|499188_499770_+	septum formation inhibitor Maf	NA	NA	NA	NA
AVZ93448.1\|499772_501242_+	ribonuclease G	NA	NA	NA	NA
AVZ93449.1\|501279_505077_+	AsmA2 domain-containing protein	NA	NA	NA	NA
AVZ93450.1\|505165_506611_+\|protease	metalloprotease TldD	NA	NA	NA	NA
AVZ93451.1\|506646_507576_-	HTH-type transcriptional activator AaeR	NA	NA	NA	NA
AVZ93452.1\|507707_507911_+	protein AaeX	NA	NA	NA	NA
AVZ93453.1\|507918_508851_+	p-hydroxybenzoic acid efflux pump subunit AaeA	NA	NA	NA	NA
AVZ93454.1\|508856_510824_+	p-hydroxybenzoic acid efflux pump subunit AaeB	NA	NA	NA	NA
AVZ93455.1\|510903_511179_+	hypothetical protein	NA	NA	NA	NA
AVZ93456.1\|511229_511496_-	DUF1471 domain-containing protein	NA	NA	NA	NA
AVZ93457.1\|511594_511858_-	DUF1471 domain-containing protein	NA	NA	NA	NA
AVZ93458.1\|512233_512704_-	arginine repressor	NA	NA	NA	NA
AVZ93459.1\|513118_514057_+	malate dehydrogenase	NA	NA	NA	NA
AVZ93460.1\|514193_515252_-\|protease	serine endoprotease DegS	NA	NA	NA	NA
AVZ93461.1\|515339_516707_-\|protease	serine endoprotease DegQ	A0A1B1IT49	uncultured_Mediterranean_phage	6.0e-22	25.3
AVZ93462.1\|516880_517279_-	DUF1043 family protein	NA	NA	NA	NA
AVZ93463.1\|517469_518597_+	cell division protein ZapE	NA	NA	NA	NA
AVZ93464.1\|518862_519291_+	50S ribosomal protein L13	NA	NA	NA	NA
AVZ93465.1\|519306_519699_+	30S ribosomal protein S9	NA	NA	NA	NA
AVZ93466.1\|519808_520012_-	hypothetical protein	NA	NA	NA	NA
AVZ93467.1\|520010_520649_+	stringent starvation protein A	NA	NA	NA	NA
AVZ93468.1\|520652_521147_+\|protease	ClpXP protease specificity-enhancing factor	A0A1S5R3H3	Pseudomonas_phage	1.5e-26	54.8
AVZ93469.1\|521271_521976_+	N-acetylmannosamine-6-phosphate 2-epimerase	NA	NA	NA	NA
AVZ93470.1\|522030_523449_-	glutamate synthase small subunit	NA	NA	NA	NA
AVZ93471.1\|523458_527919_-	glutamate synthase large subunit	NA	NA	NA	NA
AVZ93472.1\|528592_529525_+	TIGR01212 family radical SAM protein	A0A2H4PQV5	Staphylococcus_phage	3.4e-16	33.8
AVZ93473.1\|529576_530860_-	MFS transporter	NA	NA	NA	NA
AVZ93474.1\|530945_531962_-	Zn-dependent oxidoreductase	NA	NA	NA	NA
AVZ93475.1\|532359_533552_-\|transposase	IS3-like element ISKpn18 family transposase	U5P429	Shigella_phage	3.5e-50	43.5

DBSCAN-SWA_2

691564 : 703217

Enterobacteria_phage(70.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVZ93608.1\|691564_693898_-	DNA primase	Q7M2A8	Enterobacteria_phage	0.0e+00	82.2
AVZ93609.1\|693909_694230_-	hypothetical protein	NA	NA	NA	NA
AVZ93610.1\|694226_694454_-	hypothetical protein	NA	NA	NA	NA
AVZ93611.1\|694450_695008_-	host cell division inhibitor Icd-like protein	Q7M2A7	Enterobacteria_phage	1.8e-33	70.4
AVZ93612.1\|695004_695271_-	AlpA family transcriptional regulator	Q7M299	Enterobacteria_phage	2.6e-30	71.6
AVZ93613.1\|695812_696550_+	glycoprotein 3	Q7M2A2	Enterobacteria_phage	1.9e-70	59.4
AVZ93614.1\|696546_696792_+	hypothetical protein	Q7M294	Enterobacteria_phage	5.5e-19	56.8
AVZ93615.1\|696809_697376_+	Polarity suppression protein	Q7M2A1	Enterobacteria_phage	9.7e-59	63.8
AVZ93616.1\|697943_698369_-	hypothetical protein	NA	NA	NA	NA
AVZ93617.1\|698368_699319_-	cobyrinic acid a,c-diamide synthase	A0A1X9IGI7	Lactococcus_phage	1.2e-13	27.1
AVZ93618.1\|699306_700497_-	DUF4102 domain-containing protein	Q7M297	Enterobacteria_phage	6.4e-145	62.7
AVZ93619.1\|700849_702103_-	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	8.9e-89	44.9
AVZ93620.1\|702113_703217_-	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	4.8e-62	40.5

DBSCAN-SWA_3

1355000 : 1393536

Salmonella_phage(82.5%)

capsid,head,portal,plate,lysis,tail,transposase,integrase

attL 1354908:1354926|attR 1393608:1393626

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1354908:1354926	attL	NA	NA	NA	NA
AVZ94202.1\|1355000_1356053_-\|integrase	site-specific integrase	A0A218M4I3	Erwinia_phage	1.0e-106	57.0
AVZ94203.1\|1356220_1356472_+	hypothetical protein	NA	NA	NA	NA
AVZ94204.1\|1356471_1357956_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5
AVZ94205.1\|1358054_1358999_-	hypothetical protein	NA	NA	NA	NA
AVZ94206.1\|1359010_1359889_-	Repressor protein CI	A0A1S6KZZ7	Salmonella_phage	1.7e-30	39.9
AVZ94207.1\|1360034_1360256_+	regulator	NA	NA	NA	NA
AVZ94208.1\|1360288_1360798_+	hypothetical protein	E5G6L3	Salmonella_phage	5.8e-87	98.8
AVZ98100.1\|1360805_1361006_+	DUF2724 domain-containing protein	E5G6L4	Salmonella_phage	1.6e-32	97.0
AVZ94209.1\|1360969_1361311_+	hypothetical protein	E5G6L5	Salmonella_phage	4.6e-56	99.1
AVZ94210.1\|1361378_1361612_+	DUF2732 family protein	E5G6L6	Salmonella_phage	4.1e-32	96.1
AVZ94211.1\|1361611_1361839_+	TraR/DksA family transcriptional regulator	E5G6L7	Salmonella_phage	6.0e-36	98.7
AVZ94212.1\|1361835_1362693_+	DNA adenine methylase	E5G6L8	Salmonella_phage	2.0e-156	95.4
AVZ94213.1\|1362689_1365104_+	replication endonuclease	E5G6L9	Salmonella_phage	0.0e+00	97.5
AVZ94214.1\|1365257_1365446_+	hypothetical protein	E5G6M0	Salmonella_phage	5.5e-27	98.4
AVZ94215.1\|1365384_1365690_+	DinI family protein	E5G6M1	Salmonella_phage	4.7e-36	100.0
AVZ94216.1\|1365804_1366482_+	hypothetical protein	NA	NA	NA	NA
AVZ98101.1\|1366468_1366591_+	ABC transporter	NA	NA	NA	NA
AVZ94217.1\|1366629_1367610_-\|transposase	IS5-like element ISKpn26 family transposase	Q38213	Escherichia_phage	8.9e-185	99.1
AVZ94218.1\|1367957_1369700_+	hypothetical protein	NA	NA	NA	NA
AVZ94219.1\|1369761_1370787_-\|portal	phage portal protein	A0A1S6KZW5	Salmonella_phage	7.6e-171	86.7
AVZ94220.1\|1370786_1372553_-	oxidoreductase	A0A1S6KZW3	Salmonella_phage	0.0e+00	99.0
AVZ94221.1\|1372695_1373529_+\|capsid	capsid protein	A0A1S6KZW9	Salmonella_phage	6.3e-123	88.8
AVZ94222.1\|1373545_1374604_+\|capsid	phage major capsid protein, P2 family	E5G6M6	Salmonella_phage	1.1e-180	93.1
AVZ94223.1\|1374607_1375258_+	hypothetical protein	E5G6M7	Salmonella_phage	8.7e-112	96.3
AVZ94224.1\|1375353_1375818_+\|head	head completion/stabilization protein	A0A1S6KZW8	Salmonella_phage	8.4e-77	89.0
AVZ94225.1\|1375817_1376021_+\|tail	phage tail protein	A0A1S6KZY4	Salmonella_phage	1.3e-29	88.1
AVZ94226.1\|1376024_1376240_+	hypothetical protein	E5G6N0	Salmonella_phage	3.6e-30	90.1
AVZ94227.1\|1376220_1376730_+	lysozyme	E5G6N1	Salmonella_phage	2.1e-81	83.4
AVZ94228.1\|1376734_1377118_+	hypothetical protein	A0A1S6KZZ2	Salmonella_phage	2.1e-17	42.0
AVZ94229.1\|1377114_1377543_+\|lysis	LysB family phage lysis regulatory protein	A0A1S6KZX8	Salmonella_phage	9.6e-51	77.9
AVZ94230.1\|1377638_1378070_+\|tail	phage tail protein	A0A1S6KZY0	Salmonella_phage	9.9e-64	82.5
AVZ94231.1\|1378062_1378509_+	phage virion morphogenesis protein	A0A1S6L001	Salmonella_phage	2.2e-50	71.2
AVZ94232.1\|1378505_1379198_-	hypothetical protein	NA	NA	NA	NA
AVZ94233.1\|1379292_1379865_+\|plate	phage baseplate assembly protein V	E5G6N6	Salmonella_phage	4.7e-77	72.3
AVZ94234.1\|1379861_1380224_+\|plate	baseplate assembly protein	A0A1S6KZZ4	Salmonella_phage	4.9e-48	83.9
AVZ94235.1\|1380210_1381119_+\|plate	baseplate assembly protein	E5G6N8	Salmonella_phage	7.6e-106	66.9
AVZ94236.1\|1381111_1381711_+\|tail	phage tail protein I	A0A1S6L000	Salmonella_phage	1.3e-58	60.5
AVZ94237.1\|1381712_1384664_+	hypothetical protein	A0A2H4N7A3	Pectobacterium_phage	1.2e-06	50.9
AVZ94238.1\|1384667_1385399_+	hypothetical protein	NA	NA	NA	NA
AVZ94239.1\|1385395_1385599_+	hypothetical protein	NA	NA	NA	NA
AVZ94240.1\|1385628_1386705_+\|tail	phage tail protein	Q37842	Escherichia_phage	1.2e-25	44.8
AVZ94241.1\|1386843_1388016_+\|tail	phage tail protein	A0A1S6KZY7	Salmonella_phage	1.9e-210	93.3
AVZ94242.1\|1388025_1388541_+\|tail	phage major tail tube protein	E5G6P8	Salmonella_phage	1.3e-81	85.4
AVZ94243.1\|1388593_1388893_+\|tail	phage tail assembly protein	E5G6P9	Salmonella_phage	3.7e-33	79.0
AVZ94244.1\|1388907_1389027_+\|tail	GpE family phage tail protein	E5G6Q0	Salmonella_phage	2.2e-13	87.2
AVZ94245.1\|1389019_1391647_+\|tail	phage tail tape measure protein	E5FFG5	Burkholderia_phage	5.6e-117	42.0
AVZ94246.1\|1391643_1392129_+\|tail	phage tail protein	E5G6Q2	Salmonella_phage	7.2e-63	75.6
AVZ94247.1\|1392125_1393226_+	phage late control D family protein	A0A1S6KZZ5	Salmonella_phage	4.9e-176	87.4
AVZ94248.1\|1393317_1393536_+	transcriptional regulator	Q53ZE7	Salmonella_virus	7.5e-20	69.0
1393608:1393626	attR	NA	NA	NA	NA

DBSCAN-SWA_4

1427952 : 1437416

Dickeya_phage(16.67%)

tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVZ94278.1\|1427952_1429068_+	macrolide transporter subunit MacA	A0A140XAI1	Dickeya_phage	1.3e-06	52.7
AVZ94279.1\|1429064_1431005_+	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	1.9e-37	40.5
AVZ94280.1\|1430944_1431127_+	hypothetical protein	NA	NA	NA	NA
AVZ94281.1\|1431081_1431303_-	cold shock domain protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	1.3e-16	61.2
AVZ94282.1\|1431628_1431946_+\|protease	ATP-dependent Clp protease adaptor ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	2.0e-13	45.7
AVZ94283.1\|1431976_1434256_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	1.6e-165	42.0
AVZ94284.1\|1434376_1434595_-	translation initiation factor IF-1	NA	NA	NA	NA
AVZ94285.1\|1434948_1435650_-\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
AVZ94286.1\|1435694_1437416_-	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	A0A2R8FG22	Brazilian_cedratvirus	1.5e-14	34.3

DBSCAN-SWA_5

1518781 : 1590079

Enterobacteria_phage(38.71%)

capsid,portal,plate,protease,tail,terminase,integrase

attL 1557376:1557396|attR 1591900:1591920

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVZ94347.1\|1518781_1520539_-\|protease	Lon protease family protein	NA	NA	NA	NA
AVZ94348.1\|1520724_1521177_+	macrodomain Ter protein	NA	NA	NA	NA
AVZ94349.1\|1521308_1522379_-	porin OmpA	NA	NA	NA	NA
AVZ94350.1\|1522731_1523241_-	cell division inhibitor SulA	NA	NA	NA	NA
AVZ94351.1\|1523259_1523499_-	hypothetical protein	NA	NA	NA	NA
AVZ94352.1\|1523589_1524186_+	competence protein	NA	NA	NA	NA
AVZ94353.1\|1524199_1526335_-	TIGR01666 family membrane protein	NA	NA	NA	NA
AVZ94354.1\|1526352_1526799_-	YccF domain-containing protein	NA	NA	NA	NA
AVZ94355.1\|1526923_1528978_+	DNA helicase IV	A7KV33	Bacillus_phage	1.8e-14	26.0
AVZ94356.1\|1528989_1529448_-	methylglyoxal synthase	NA	NA	NA	NA
AVZ94357.1\|1529602_1530016_+	CoA-binding protein	NA	NA	NA	NA
AVZ94358.1\|1530045_1530363_-	heat-shock protein HspQ	NA	NA	NA	NA
AVZ94359.1\|1530422_1531625_-	ribosomal RNA large subunit methyltransferase I	NA	NA	NA	NA
AVZ94360.1\|1531815_1532370_+	YbhB/YbcL family Raf kinase inhibitor-like protein	NA	NA	NA	NA
AVZ94361.1\|1532387_1533176_+	AraC family transcriptional regulator	NA	NA	NA	NA
AVZ94362.1\|1533224_1533506_+	acylphosphatase	NA	NA	NA	NA
AVZ94363.1\|1533502_1533832_-	sulfurtransferase TusE	NA	NA	NA	NA
AVZ94364.1\|1533920_1534580_-\|protease	FtsH protease modulator YccA	A0A2H4JFM9	uncultured_Caudovirales_phage	3.2e-37	46.6
AVZ94365.1\|1534849_1536502_+	oligopeptide ABC transporter substrate-binding protein OppA	NA	NA	NA	NA
AVZ94366.1\|1536858_1537479_-	EAL domain-containing protein	NA	NA	NA	NA
AVZ94367.1\|1537457_1537745_-	hypothetical protein	NA	NA	NA	NA
AVZ94368.1\|1537809_1537998_+	hypothetical protein	NA	NA	NA	NA
AVZ94369.1\|1538167_1539133_-	oxidoreductase	NA	NA	NA	NA
AVZ94370.1\|1539190_1540639_-	NAD-dependent succinate-semialdehyde dehydrogenase	NA	NA	NA	NA
AVZ94371.1\|1540657_1541782_-	ring-hydroxylating oxygenase subunit alpha	NA	NA	NA	NA
AVZ94372.1\|1541818_1543426_-	BCCT family transporter	NA	NA	NA	NA
AVZ94373.1\|1543930_1545016_-	tartrate dehydrogenase	NA	NA	NA	NA
AVZ94374.1\|1545119_1546061_+	LysR family transcriptional regulator	NA	NA	NA	NA
AVZ94375.1\|1546057_1547338_-	FAD-binding oxidoreductase	NA	NA	NA	NA
AVZ94376.1\|1547340_1548828_-	aldehyde dehydrogenase PuuC	NA	NA	NA	NA
AVZ94377.1\|1549148_1549706_-	HTH-type transcriptional regulator PuuR	NA	NA	NA	NA
AVZ94378.1\|1549731_1550496_-	gamma-glutamyl-gamma-aminobutyrate hydrolase	NA	NA	NA	NA
AVZ94379.1\|1550709_1552131_+	glutamine synthetase	NA	NA	NA	NA
AVZ94380.1\|1552303_1552495_+	hypothetical protein	NA	NA	NA	NA
AVZ94381.1\|1552484_1553876_+	APC family permease	NA	NA	NA	NA
AVZ94382.1\|1553994_1554117_-	hypothetical protein	NA	NA	NA	NA
AVZ94383.1\|1554373_1554595_+	hypothetical protein	NA	NA	NA	NA
AVZ94384.1\|1554615_1555404_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
AVZ94385.1\|1555519_1555969_-	transcriptional regulator	NA	NA	NA	NA
AVZ94386.1\|1556121_1557369_+	bifunctional glucose-1-phosphatase/inositol phosphatase	NA	NA	NA	NA
1557376:1557396	attL	NA	NA	NA	NA
AVZ94387.1\|1557465_1558473_-\|integrase	integrase	A0A0M4RTQ0	Salmonella_phage	7.6e-99	52.1
AVZ94388.1\|1558560_1558863_-	XRE family transcriptional regulator	Q1JS63	Enterobacteria_phage	2.6e-26	61.0
AVZ94389.1\|1558957_1559290_+	hypothetical protein	NA	NA	NA	NA
AVZ98110.1\|1559481_1559679_+	DUF4761 domain-containing protein	NA	NA	NA	NA
AVZ94390.1\|1559695_1560082_+	hypothetical protein	NA	NA	NA	NA
AVZ94391.1\|1560097_1560370_+	hypothetical protein	NA	NA	NA	NA
AVZ94392.1\|1560437_1560662_+	hypothetical protein	NA	NA	NA	NA
AVZ94393.1\|1560658_1561237_+	3'-5' exoribonuclease	A0A192Y6E0	Salmonella_phage	2.7e-32	39.5
AVZ94394.1\|1561245_1562214_+	DNA adenine methylase	A0A0M4QWR0	Salmonella_phage	3.1e-73	49.1
AVZ94395.1\|1562515_1563532_+	DNA cytosine methyltransferase	Q6J1P4	Burkholderia_virus	2.4e-92	54.8
AVZ94396.1\|1563524_1566119_+	replication endonuclease	A0A0M4RTM8	Salmonella_phage	1.1e-192	51.7
AVZ94397.1\|1566290_1566698_+	hypothetical protein	NA	NA	NA	NA
AVZ98111.1\|1566970_1567285_+	hypothetical protein	NA	NA	NA	NA
AVZ94398.1\|1567692_1568727_-\|portal	phage portal protein	A0A0A7NPT9	Enterobacteria_phage	2.0e-139	68.6
AVZ94399.1\|1568747_1570469_-	oxidoreductase	A0A0A7NV54	Enterobacteria_phage	4.3e-227	66.5
AVZ94400.1\|1570629_1571463_+\|capsid	phage capsid protein	A0A0A7NRY7	Enterobacteria_phage	6.5e-96	65.3
AVZ94401.1\|1571486_1572536_+\|capsid	phage major capsid protein, P2 family	A0A0M3ULA3	Salmonella_phage	2.3e-106	53.9
AVZ94402.1\|1572582_1573443_+\|terminase	terminase	B9A7B6	Serratia_phage	1.0e-83	68.4
AVZ94403.1\|1573545_1574043_+\|capsid	capsid assembly protein	B9A7B7	Serratia_phage	2.2e-59	69.7
AVZ94404.1\|1574042_1574243_+\|tail	phage tail protein	A0A0A7NV57	Enterobacteria_phage	3.0e-15	64.6
AVZ94405.1\|1574233_1574515_+	hypothetical protein	NA	NA	NA	NA
AVZ94406.1\|1574511_1575063_+	lysozyme	Q1I0Z1	Pasteurella_virus	6.8e-33	42.5
AVZ98112.1\|1575339_1575603_+	peptidase	NA	NA	NA	NA
AVZ94407.1\|1575599_1576058_+\|tail	phage tail protein	A0A0A7NPU6	Enterobacteria_phage	3.1e-31	46.8
AVZ94408.1\|1576054_1576696_+	phage virion morphogenesis protein	A0A0M4RCU1	Salmonella_phage	1.4e-45	49.8
AVZ94409.1\|1576695_1577280_+\|plate	phage baseplate assembly protein V	A0A0A7NRZ3	Enterobacteria_phage	8.7e-63	61.4
AVZ94410.1\|1577276_1577645_+\|plate	baseplate assembly protein	A0A0A7NQ90	Enterobacteria_phage	2.3e-29	57.4
AVZ94411.1\|1577631_1578531_+\|plate	baseplate assembly protein	A0A0A7NPY5	Enterobacteria_phage	6.2e-92	62.2
AVZ94412.1\|1578523_1579126_+\|tail	phage tail protein I	A0A1S6L000	Salmonella_phage	1.8e-42	44.8
AVZ94413.1\|1579127_1581392_+	hypothetical protein	B5TAB2	Burkholderia_phage	5.7e-102	39.7
AVZ94414.1\|1581397_1582141_+	hypothetical protein	NA	NA	NA	NA
AVZ94415.1\|1582152_1583229_+\|tail	phage tail protein	Q37842	Escherichia_phage	2.3e-32	48.3
AVZ94416.1\|1583326_1583815_-\|tail	phage tail protein	A0A0A7NV65	Enterobacteria_phage	2.9e-51	59.9
AVZ94417.1\|1583826_1586562_-\|tail	phage tail tape measure protein	B9A7B3	Serratia_phage	2.0e-242	80.6
AVZ94418.1\|1586551_1586704_-\|tail	GpE family phage tail protein	O80316	Escherichia_phage	1.5e-11	71.4
AVZ94419.1\|1586724_1587024_-\|tail	phage tail assembly protein	B9A7B2	Serratia_phage	2.9e-30	72.7
AVZ94420.1\|1587075_1587591_-\|tail	phage major tail tube protein	A0A0A7NPV8	Enterobacteria_phage	2.6e-63	70.0
AVZ94421.1\|1587591_1588773_-\|tail	phage tail protein	A0A0A7NV69	Enterobacteria_phage	8.0e-156	69.4
AVZ94422.1\|1588924_1590079_+	phage late control D family protein	B9A7A9	Serratia_phage	6.6e-171	77.2
1591900:1591920	attR	NA	NA	NA	NA

DBSCAN-SWA_6

1699654 : 1787533

Klebsiella_phage(45.45%)

tRNA,capsid,head,portal,holin,tail,terminase,integrase

attL 1695952:1695966|attR 1754072:1754086

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1695952:1695966	attL	NA	NA	NA	NA
AVZ98121.1\|1699654_1700761_-\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
AVZ94523.1\|1700817_1701276_-	NUDIX hydrolase	NA	NA	NA	NA
AVZ94524.1\|1701292_1701943_-	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA
AVZ94525.1\|1702183_1703434_+	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	1.1e-19	92.6
AVZ94526.1\|1703551_1704679_-\|integrase	integrase	O21925	Phage_21	4.4e-119	58.4
AVZ94527.1\|1704659_1704905_-	excisionase	NA	NA	NA	NA
AVZ94528.1\|1704957_1707096_-	exonuclease	S4TNL0	Salmonella_phage	5.6e-99	42.7
AVZ94529.1\|1707237_1707582_-	transcriptional regulator	NA	NA	NA	NA
AVZ94530.1\|1707624_1707819_-	DUF1482 family protein	NA	NA	NA	NA
AVZ94531.1\|1707828_1708047_-	hypothetical protein	NA	NA	NA	NA
AVZ94532.1\|1708209_1708524_+	hypothetical protein	NA	NA	NA	NA
AVZ94533.1\|1708845_1709283_-	helix-turn-helix domain-containing protein	H6WRX4	Salmonella_phage	1.3e-39	62.2
AVZ94534.1\|1709371_1709596_+	Cro/Cl family transcriptional regulator	H6WRX5	Salmonella_phage	1.3e-19	62.5
AVZ94535.1\|1709598_1710153_+	hypothetical protein	NA	NA	NA	NA
AVZ98122.1\|1710212_1711217_+	DNA-binding protein	A0A0U2RT81	Escherichia_phage	1.0e-31	40.0
AVZ94536.1\|1711209_1711674_+	replication protein	A0A0U2JGJ0	Escherichia_phage	4.1e-63	72.2
AVZ94537.1\|1711687_1712128_+	hypothetical protein	NA	NA	NA	NA
AVZ94538.1\|1712476_1713868_-	hypothetical protein	NA	NA	NA	NA
AVZ98123.1\|1713956_1714826_-	hypothetical protein	NA	NA	NA	NA
AVZ94539.1\|1715177_1715891_+	hypothetical protein	NA	NA	NA	NA
AVZ94540.1\|1716064_1717426_+	dNTP triphosphohydrolase	NA	NA	NA	NA
AVZ94541.1\|1718015_1718267_+	hypothetical protein	NA	NA	NA	NA
AVZ94542.1\|1718266_1719751_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5
AVZ94543.1\|1719829_1720063_+	DinI family protein	K7PM44	Enterobacteria_phage	3.7e-25	71.1
AVZ94544.1\|1720074_1720365_+	hypothetical protein	H6WRY6	Salmonella_phage	8.0e-17	56.9
AVZ94545.1\|1720405_1720798_+	DNA-binding protein	K7PHB4	Enterobacterial_phage	8.0e-12	36.6
AVZ94546.1\|1720794_1720998_+	hypothetical protein	NA	NA	NA	NA
AVZ94547.1\|1720997_1722029_+	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	4.7e-96	49.6
AVZ94548.1\|1722045_1722648_+	hypothetical protein	H9C175	Pectobacterium_phage	1.1e-76	68.6
AVZ94549.1\|1724899_1725115_+\|holin	holin	A5LH82	Enterobacteria_phage	2.7e-30	88.7
AVZ94550.1\|1725114_1725612_+	lysozyme	A0A1V0E5Q7	Salmonella_phage	1.1e-77	84.6
AVZ94551.1\|1725608_1725959_+	hypothetical protein	R9TPM9	Aeromonas_phage	7.9e-11	38.1
AVZ94552.1\|1726908_1727346_+	hypothetical protein	NA	NA	NA	NA
AVZ94553.1\|1727384_1727609_-	hypothetical protein	NA	NA	NA	NA
AVZ94554.1\|1727935_1728298_+	HNH endonuclease	Q6UAS2	Klebsiella_phage	1.2e-57	83.3
AVZ94555.1\|1728249_1728573_+	hypothetical protein	NA	NA	NA	NA
AVZ94556.1\|1728569_1729001_+	hypothetical protein	Q6UAS0	Klebsiella_phage	1.8e-41	61.6
AVZ94557.1\|1729249_1729684_+\|terminase	phage terminase small subunit P27 family	A0A1J0GV10	Halomonas_phage	9.4e-30	61.9
AVZ94558.1\|1729683_1731405_+\|terminase	terminase large subunit	Q7Y413	Yersinia_phage	1.5e-190	57.4
AVZ94559.1\|1731398_1731578_+	hypothetical protein	Q6UAX9	Klebsiella_phage	3.1e-11	57.6
AVZ94560.1\|1731577_1732837_+\|portal	phage portal protein	Q6UAX8	Klebsiella_phage	1.8e-222	89.8
AVZ94561.1\|1732873_1733794_+	S49 family peptidase	Q6UAX7	Klebsiella_phage	9.6e-149	88.2
AVZ94562.1\|1733871_1735158_+\|capsid	phage major capsid protein	Q6UAX6	Klebsiella_phage	9.8e-216	89.0
AVZ94563.1\|1735216_1735477_+	hypothetical protein	Q6UAX5	Klebsiella_phage	7.4e-22	60.5
AVZ94564.1\|1735457_1735775_+\|head,tail	phage gp6-like head-tail connector protein	Q6UAX4	Klebsiella_phage	1.5e-45	89.8
AVZ94565.1\|1735771_1736110_+\|head,tail	head-tail adaptor protein	Q6UAX3	Klebsiella_phage	2.8e-53	90.2
AVZ94566.1\|1736090_1736480_+	hypothetical protein	Q6UAX2	Klebsiella_phage	9.6e-58	86.0
AVZ94567.1\|1736476_1736878_+	hypothetical protein	Q6UAX1	Klebsiella_phage	2.3e-62	94.0
AVZ94568.1\|1736909_1737371_+\|tail	phage tail protein	Q6UAX0	Klebsiella_phage	7.8e-67	83.7
AVZ94569.1\|1737428_1737794_+\|tail	phage tail protein	Q6UAW8	Klebsiella_phage	1.6e-51	89.3
AVZ94570.1\|1737808_1738027_+	hypothetical protein	Q6UAW9	Klebsiella_phage	5.4e-34	90.5
AVZ94571.1\|1738026_1741362_+\|tail	phage tail tape measure protein	Q6UAW7	Klebsiella_phage	0.0e+00	88.3
AVZ94572.1\|1741361_1741700_+\|tail	phage tail protein	Q6UAW6	Klebsiella_phage	1.4e-57	88.4
AVZ94573.1\|1741696_1742452_+\|tail	phage minor tail protein L	Q6UAW5	Klebsiella_phage	4.6e-125	80.5
AVZ94574.1\|1742453_1743164_+	peptidase P60	Q6UAW4	Klebsiella_phage	1.9e-136	90.3
AVZ94575.1\|1743205_1743628_+	hypothetical protein	J9Q806	Salmonella_phage	5.9e-29	50.0
AVZ94576.1\|1743654_1744248_+\|tail	tail assembly protein	K7PHE5	Enterobacteria_phage	8.0e-80	76.6
AVZ94577.1\|1744310_1757015_+	DUF1983 domain-containing protein	Q6UAW1	Klebsiella_phage	0.0e+00	47.1
1754072:1754086	attR	NA	NA	NA	NA
AVZ94578.1\|1757083_1758580_+\|tail	tail fiber domain-containing protein	A0A0P0IDN1	Klebsiella_phage	1.4e-125	63.7
AVZ94579.1\|1758734_1758887_+	isocitrate dehydrogenase	Q77Z09	Phage_21	3.8e-18	92.0
AVZ94580.1\|1759159_1759873_-	ArsR family transcriptional regulator	NA	NA	NA	NA
AVZ94581.1\|1759869_1760262_-	amino acid-binding protein	NA	NA	NA	NA
AVZ94582.1\|1760254_1760578_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
AVZ94583.1\|1761014_1761242_-	DUF1272 domain-containing protein	NA	NA	NA	NA
AVZ94584.1\|1761354_1762548_-	glutathione-dependent formaldehyde dehydrogenase	NA	NA	NA	NA
AVZ94585.1\|1763169_1763355_+	stress-induced acidophilic repeat motif-containing protein	NA	NA	NA	NA
AVZ94586.1\|1763445_1763940_+	ferritin-like domain-containing protein	NA	NA	NA	NA
AVZ94587.1\|1763966_1764473_+	ferritin-like domain-containing protein	NA	NA	NA	NA
AVZ94588.1\|1764489_1765377_+	manganese catalase family protein	NA	NA	NA	NA
AVZ94589.1\|1765432_1766839_+	cytochrome ubiquinol oxidase subunit I	NA	NA	NA	NA
AVZ94590.1\|1766835_1767846_+	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA
AVZ94591.1\|1767961_1768159_-	hypothetical protein	NA	NA	NA	NA
AVZ94592.1\|1768725_1769358_+	DNA-binding protein	NA	NA	NA	NA
AVZ94593.1\|1769397_1769577_+	hypothetical protein	NA	NA	NA	NA
AVZ94594.1\|1769974_1770661_+	EAL domain-containing protein	NA	NA	NA	NA
AVZ94595.1\|1770971_1772480_-	UbiD family decarboxylase	NA	NA	NA	NA
AVZ94596.1\|1772600_1773491_+	LysR family transcriptional regulator	NA	NA	NA	NA
AVZ94597.1\|1773497_1775282_-	sensor domain-containing diguanylate cyclase	A0A127AWB9	Bacillus_phage	5.8e-17	36.1
AVZ94598.1\|1775355_1776564_-	HD domain-containing protein	NA	NA	NA	NA
AVZ94599.1\|1776866_1777910_+	type II asparaginase	NA	NA	NA	NA
AVZ94600.1\|1778164_1778356_-	hypothetical protein	NA	NA	NA	NA
AVZ94601.1\|1778571_1779486_+	kdo(2)-lipid IV(A) palmitoleoyltransferase	A0A1W6JP29	Morganella_phage	1.1e-72	50.4
AVZ94602.1\|1779575_1780214_+	leucine efflux protein	NA	NA	NA	NA
AVZ94603.1\|1780344_1780608_+	DUF2534 family protein	NA	NA	NA	NA
AVZ94604.1\|1780667_1780793_-	hypothetical protein	NA	NA	NA	NA
AVZ98124.1\|1780910_1780985_-	hypothetical protein	NA	NA	NA	NA
AVZ94605.1\|1780984_1781086_-	hypothetical protein	NA	NA	NA	NA
AVZ94606.1\|1781143_1782157_-	sensor domain-containing diguanylate cyclase	A0A127AWB9	Bacillus_phage	1.4e-12	29.0
AVZ94607.1\|1782457_1782697_+	DUF333 domain-containing protein	NA	NA	NA	NA
AVZ94608.1\|1782686_1783043_-	DUF488 domain-containing protein	NA	NA	NA	NA
AVZ94609.1\|1783029_1783539_-	DUF523 domain-containing protein	NA	NA	NA	NA
AVZ94610.1\|1783684_1784377_+	hypothetical protein	NA	NA	NA	NA
AVZ94611.1\|1784408_1785593_-	cyanate MFS transporter	NA	NA	NA	NA
AVZ98125.1\|1785694_1786486_+	AraC family transcriptional regulator	NA	NA	NA	NA
AVZ94612.1\|1786469_1786916_-	DUF441 domain-containing protein	NA	NA	NA	NA
AVZ94613.1\|1787032_1787533_-\|tRNA	YbaK/prolyl-tRNA synthetase associated domain-containing protein	NA	NA	NA	NA

DBSCAN-SWA_7

1915205 : 1928117

Enterobacteria_phage(50.0%)

integrase

attL 1907183:1907198|attR 1930799:1930814

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1907183:1907198	attL	NA	NA	NA	NA
AVZ94734.1\|1915205_1916015_-	peptide ABC transporter ATP-binding protein SapF	A0A2H4PQG7	Staphylococcus_phage	2.1e-14	28.9
AVZ94735.1\|1916016_1917009_-	peptide ABC transporter ATP-binding protein SapD	G9BWD6	Planktothrix_phage	3.0e-07	27.2
AVZ94736.1\|1917008_1917899_-	peptide ABC transporter permease SapC	NA	NA	NA	NA
AVZ98130.1\|1918075_1919263_+\|integrase	site-specific integrase	K7PGY1	Enterobacteria_phage	1.1e-120	52.4
AVZ94737.1\|1919159_1919474_-	hypothetical protein	K7PM28	Enterobacteria_phage	1.6e-10	50.8
AVZ94738.1\|1919470_1920133_-	DNA methyltransferase	G8C7S6	Escherichia_phage	2.7e-105	84.6
AVZ94739.1\|1920129_1920558_-	regulator	M9NYX4	Enterobacteria_phage	7.5e-64	80.3
AVZ94740.1\|1920554_1921235_-	exonuclease	A0A0M3ULE0	Salmonella_phage	8.2e-121	91.2
AVZ94741.1\|1921520_1922366_-	phage recombination protein Bet	A0A1I9KF88	Aeromonas_phage	1.8e-69	59.2
AVZ94742.1\|1922381_1922666_-	host nuclease inhibitor GamL	G8C7T1	Escherichia_phage	1.1e-39	79.8
AVZ94743.1\|1922754_1922949_-	hypothetical protein	NA	NA	NA	NA
AVZ94744.1\|1923377_1923581_+	hypothetical protein	A0A192Y6Q5	Salmonella_phage	3.9e-18	71.6
AVZ94745.1\|1923662_1924739_-	ParA family protein	H2BD62	Pseudomonas_phage	9.1e-58	37.9
AVZ94746.1\|1924884_1925004_-	hypothetical protein	NA	NA	NA	NA
AVZ98131.1\|1925026_1925725_-	helix-turn-helix transcriptional regulator	Q76H56	Enterobacteria_phage	3.7e-108	84.1
AVZ94747.1\|1925836_1926064_+	transcriptional regulator	Q76H55	Enterobacteria_phage	1.4e-24	77.1
AVZ94748.1\|1926104_1926326_+	transcriptional regulator	G8EYH8	Enterobacteria_phage	6.9e-05	41.7
AVZ94749.1\|1926411_1927272_+	replication protein	K7PGT1	Enterobacteria_phage	1.0e-59	53.3
AVZ94750.1\|1927268_1928117_+	AAA family ATPase	K7PLU3	Enterobacteria_phage	5.1e-88	60.1
1930799:1930814	attR	NA	NA	NA	NA

DBSCAN-SWA_8

1931250 : 1946846

Enterobacteria_phage(26.67%)

holin,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVZ94753.1\|1931250_1931718_+	recombination protein NinB	Q8VNP6	Enterobacteria_phage	3.4e-33	45.8
AVZ94754.1\|1931698_1931866_+	NinE family protein	K7P7K0	Enterobacteria_phage	4.6e-09	62.5
AVZ94755.1\|1931862_1932531_+	serine/threonine protein phosphatase	K7P6H8	Enterobacteria_phage	1.4e-104	78.7
AVZ94756.1\|1932523_1933162_+	hypothetical protein	H6WRY9	Salmonella_phage	3.2e-74	69.8
AVZ94757.1\|1933158_1933299_+	YlcG family protein	NA	NA	NA	NA
AVZ98132.1\|1933298_1933988_+	antiterminator	I6PDF8	Cronobacter_phage	2.1e-55	53.1
AVZ94758.1\|1934625_1934937_+\|holin	holin	A0A286N2Q5	Klebsiella_phage	3.8e-49	100.0
AVZ94759.1\|1934933_1935473_+	hypothetical protein	A0A286N2Q6	Klebsiella_phage	3.3e-101	98.9
AVZ94760.1\|1935613_1936318_+\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AVZ98133.1\|1937299_1938091_+	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA2	NA	NA	NA	NA
AVZ94761.1\|1938254_1938602_+	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
AVZ94762.1\|1939217_1939922_+\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AVZ94763.1\|1940514_1940937_+	hypothetical protein	K7P834	Enterobacteria_phage	3.6e-26	45.3
AVZ94764.1\|1941583_1941835_+	hypothetical protein	NA	NA	NA	NA
AVZ94765.1\|1941834_1943319_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5
AVZ94766.1\|1943398_1943818_+	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	1.4e-35	57.5
AVZ94767.1\|1943819_1945085_+	translesion error-prone DNA polymerase V subunit UmuC	I6RSM4	Salmonella_phage	9.6e-208	82.7
AVZ98134.1\|1945160_1945988_-	FRG domain-containing protein	A0A1S6KZX9	Salmonella_phage	8.4e-19	30.2
AVZ94768.1\|1946174_1946846_-	SOS response-associated peptidase	A0A2H4J5W2	uncultured_Caudovirales_phage	4.5e-79	59.6

DBSCAN-SWA_9

1979779 : 2051432

uncultured_Caudovirales_phage(33.33%)

head,plate,lysis,tail,terminase,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVZ94799.1\|1979779_1980541_+	SDR family NAD(P)-dependent oxidoreductase	Q06VL0	Trichoplusia_ni_ascovirus	2.4e-20	32.5
AVZ94800.1\|1980757_1982290_+	HD domain-containing protein	A0A1B1ISR1	uncultured_Mediterranean_phage	1.1e-21	30.0
AVZ94801.1\|1982488_1983037_-	DJ-1/PfpI family protein	NA	NA	NA	NA
AVZ94802.1\|1983233_1984415_+	DUF4102 domain-containing protein	A0A0M4QX09	Salmonella_phage	5.6e-202	84.2
AVZ94803.1\|1984395_1984638_-	AlpA family transcriptional regulator	A0A0M4RTZ2	Salmonella_phage	2.2e-20	73.8
AVZ94804.1\|1984816_1985296_-	hypothetical protein	NA	NA	NA	NA
AVZ94805.1\|1985292_1985505_-	hypothetical protein	A0A286S2B6	Klebsiella_phage	3.4e-33	98.6
AVZ94806.1\|1985501_1985726_-	hypothetical protein	A0A286S2B3	Klebsiella_phage	3.1e-29	89.2
AVZ94807.1\|1985715_1986426_-	DNA-binding protein	A0A286S260	Klebsiella_phage	2.1e-111	88.3
AVZ94808.1\|1986431_1986950_-	hypothetical protein	A0A286S1S7	Klebsiella_phage	1.7e-94	98.8
AVZ94809.1\|1987054_1987882_-	SPFH/Band 7/PHB domain protein	Q8W654	Enterobacteria_phage	5.5e-111	84.0
AVZ94810.1\|1987878_1988073_-	hypothetical protein	NA	NA	NA	NA
AVZ94811.1\|1988069_1988495_-	hypothetical protein	A0A286S1S2	Klebsiella_phage	3.5e-53	77.9
AVZ94812.1\|1988681_1988936_-	hypothetical protein	A0A286SGR4	Klebsiella_phage	3.1e-41	97.6
AVZ94813.1\|1988928_1989294_-	hypothetical protein	A0A286S1Q6	Klebsiella_phage	6.9e-58	99.2
AVZ94814.1\|1989463_1989652_-	hypothetical protein	A0A286S1P8	Klebsiella_phage	4.6e-26	100.0
AVZ94815.1\|1989644_1989959_-	hypothetical protein	A0A286S1T9	Klebsiella_phage	1.0e-49	100.0
AVZ94816.1\|1990129_1990798_-	LexA family transcriptional regulator	A0A286S2B2	Klebsiella_phage	2.4e-125	99.5
AVZ94817.1\|1990895_1991117_+	XRE family transcriptional regulator	A0A286S2C1	Klebsiella_phage	3.0e-32	100.0
AVZ94818.1\|1991091_1991385_+	hypothetical protein	A0A286S2B5	Klebsiella_phage	2.8e-38	97.6
AVZ94819.1\|1991693_1993352_+	ATP-dependent helicase	A0A286N2P9	Klebsiella_phage	0.0e+00	96.0
AVZ94820.1\|1993353_1994316_+	DNA primase	A0A286N2Q0	Klebsiella_phage	4.8e-183	99.4
AVZ94821.1\|1994312_1994789_+	hypothetical protein	A0A286N2Q1	Klebsiella_phage	1.8e-90	100.0
AVZ94822.1\|1994785_1995568_+	antitermination protein	F1C595	Cronobacter_phage	7.2e-113	76.8
AVZ94823.1\|1995973_1996222_+\|lysis	lysis protein	NA	NA	NA	NA
AVZ94824.1\|1996224_1996755_+	lysozyme	K7PLY1	Enterobacteria_phage	2.7e-79	77.1
AVZ94825.1\|1996751_1997141_+	lipase chaperone	A0A192Y6H8	Salmonella_phage	9.4e-21	49.2
AVZ94826.1\|1997375_1997696_+	negative regulator GrlR	NA	NA	NA	NA
AVZ94827.1\|1997797_1998550_+	hypothetical protein	A0A077KBY7	Edwardsiella_phage	4.0e-12	66.0
AVZ94828.1\|1998500_1999901_+\|terminase	PBSX family phage terminase large subunit	A0A077KAW0	Edwardsiella_phage	9.4e-188	69.0
AVZ94829.1\|2000138_2001590_+	DUF1073 domain-containing protein	A0A0M4S6U1	Salmonella_phage	3.8e-192	68.8
AVZ98137.1\|2001645_2002194_+	hypothetical protein	A0A0M4REK0	Salmonella_phage	3.0e-49	56.3
AVZ94830.1\|2002245_2003448_+	DUF2213 domain-containing protein	A0A0M4R5A6	Salmonella_phage	2.6e-106	54.1
AVZ94831.1\|2003451_2003946_+	hypothetical protein	A0A2H4JHM9	uncultured_Caudovirales_phage	4.2e-50	62.7
AVZ94832.1\|2003957_2004899_+	DUF2184 domain-containing protein	A0A2H4J191	uncultured_Caudovirales_phage	1.7e-137	77.1
AVZ94833.1\|2004938_2005220_+	hypothetical protein	NA	NA	NA	NA
AVZ94834.1\|2005188_2005608_+	DUF4054 domain-containing protein	A0A0M5M3S2	Salmonella_phage	3.3e-40	60.7
AVZ94835.1\|2005604_2006111_+	hypothetical protein	NA	NA	NA	NA
AVZ94836.1\|2006110_2006497_+\|head,tail	head-tail adaptor	A0A2H4J1A4	uncultured_Caudovirales_phage	1.1e-48	78.2
AVZ94837.1\|2006591_2007032_+	hypothetical protein	A0A2H4J1A0	uncultured_Caudovirales_phage	1.6e-40	51.7
AVZ94838.1\|2007035_2008181_+	DUF3383 domain-containing protein	A0A2H4J8G4	uncultured_Caudovirales_phage	6.3e-166	76.9
AVZ94839.1\|2008191_2008632_+	DUF3277 family protein	A0A0M5M1K6	Salmonella_phage	3.3e-62	80.1
AVZ94840.1\|2008635_2009061_+	hypothetical protein	A0A2H4J2V6	uncultured_Caudovirales_phage	2.6e-40	63.4
AVZ94841.1\|2009096_2009249_+	NTP pyrophosphohydrolase	A0A2H4J1A2	uncultured_Caudovirales_phage	7.6e-19	88.0
AVZ94842.1\|2009238_2011242_+	lytic transglycosylase domain-containing protein	A0A2H4J9N7	uncultured_Caudovirales_phage	1.2e-247	63.6
AVZ94843.1\|2011241_2011841_+	hypothetical protein	A0A2H4J1B3	uncultured_Caudovirales_phage	9.9e-54	57.6
AVZ94844.1\|2011841_2012144_+	hypothetical protein	A0A2H4J495	uncultured_Caudovirales_phage	2.0e-26	55.2
AVZ94845.1\|2012146_2013169_+	hypothetical protein	A0A2H4J1B2	uncultured_Caudovirales_phage	9.2e-100	54.2
AVZ94846.1\|2013168_2013510_+	hypothetical protein	A0A2H4J1A5	uncultured_Caudovirales_phage	1.8e-23	46.6
AVZ94847.1\|2013562_2013748_-	hypothetical protein	NA	NA	NA	NA
AVZ94848.1\|2013784_2014351_+	hypothetical protein	NA	NA	NA	NA
AVZ94849.1\|2014404_2015058_+	hypothetical protein	A0A2H4J8H6	uncultured_Caudovirales_phage	1.0e-59	63.5
AVZ94850.1\|2015059_2015413_+	hypothetical protein	A0A2H4J629	uncultured_Caudovirales_phage	2.3e-50	80.3
AVZ94851.1\|2015412_2016609_+	hypothetical protein	A0A0M4RD32	Salmonella_phage	3.9e-158	72.9
AVZ94852.1\|2016605_2017379_+	DUF2612 domain-containing protein	A0A2H4J1A9	uncultured_Caudovirales_phage	2.8e-77	54.4
AVZ94853.1\|2017378_2018245_+	hypothetical protein	A0A2H4IYR0	uncultured_Caudovirales_phage	1.9e-34	64.5
AVZ94854.1\|2018244_2018442_+	hypothetical protein	NA	NA	NA	NA
AVZ98138.1\|2020792_2021521_+	hypothetical protein	NA	NA	NA	NA
AVZ94855.1\|2021531_2022263_+	hypothetical protein	NA	NA	NA	NA
AVZ94856.1\|2022259_2022469_+	hypothetical protein	NA	NA	NA	NA
AVZ94857.1\|2022573_2022858_+	hypothetical protein	NA	NA	NA	NA
AVZ94858.1\|2023080_2023329_-	DinI family protein	S5MQI1	Escherichia_phage	1.4e-25	70.4
AVZ94859.1\|2023742_2023886_+	ABC transporter	NA	NA	NA	NA
AVZ94860.1\|2023924_2024905_-\|transposase	IS5-like element ISKpn26 family transposase	Q38213	Escherichia_phage	8.9e-185	99.1
AVZ94861.1\|2025913_2027458_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
AVZ98139.1\|2027470_2028811_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
AVZ94862.1\|2028807_2029497_+	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
AVZ94863.1\|2029493_2031200_+	OmpA family protein	NA	NA	NA	NA
AVZ94864.1\|2031204_2031696_+	type VI secretion system tube protein Hcp	NA	NA	NA	NA
AVZ94865.1\|2031960_2034615_+	type VI secretion system ATPase TssH	K4FB40	Cronobacter_phage	2.5e-96	33.4
AVZ94866.1\|2034607_2036986_+	type VI secretion system tip protein VgrG	A0A2H4JCD4	uncultured_Caudovirales_phage	9.2e-18	33.8
AVZ94867.1\|2036986_2037766_+	DUF4123 domain-containing protein	NA	NA	NA	NA
AVZ94868.1\|2037829_2038360_+	DUF3304 domain-containing protein	NA	NA	NA	NA
AVZ94869.1\|2038428_2038959_+	DUF3304 domain-containing protein	NA	NA	NA	NA
AVZ94870.1\|2039026_2039557_+	DUF3304 domain-containing protein	NA	NA	NA	NA
AVZ94871.1\|2039625_2040156_+	DUF3304 domain-containing protein	NA	NA	NA	NA
AVZ94872.1\|2040223_2040754_+	DUF3304 domain-containing protein	NA	NA	NA	NA
AVZ94873.1\|2040741_2043159_+	DUF2235 domain-containing protein	NA	NA	NA	NA
AVZ94874.1\|2043203_2043461_+	PAAR domain-containing protein	NA	NA	NA	NA
AVZ94875.1\|2043457_2044597_+	hypothetical protein	NA	NA	NA	NA
AVZ94876.1\|2044580_2048006_+	type VI secretion protein VasK	NA	NA	NA	NA
AVZ94877.1\|2048005_2048413_+	type VI secretion protein	NA	NA	NA	NA
AVZ94878.1\|2048464_2049598_+	type VI secretion system protein TssA	NA	NA	NA	NA
AVZ94879.1\|2049677_2051432_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA

DBSCAN-SWA_10

2235883 : 2246770

Escherichia_phage(87.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVZ95052.1\|2235883_2236504_-	aldolase	A0A077SK32	Escherichia_phage	8.0e-115	100.0
AVZ95053.1\|2236496_2237762_-	four-carbon acid sugar kinase family protein	A0A077SLJ7	Escherichia_phage	6.6e-233	99.5
AVZ95054.1\|2237773_2238676_-	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	7.7e-159	99.3
AVZ95055.1\|2238936_2239698_+	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	1.9e-134	100.0
AVZ95056.1\|2239718_2240579_-	class A broad-spectrum beta-lactamase SHV-11	A0A077SL40	Escherichia_phage	2.2e-155	99.3
AVZ95057.1\|2240876_2241137_+	hypothetical protein	A0A077SK33	Escherichia_phage	3.5e-40	97.7
AVZ95058.1\|2241223_2242312_+	chromosome segregation protein SMC	A0A077SLJ9	Escherichia_phage	8.0e-211	100.0
AVZ95059.1\|2242342_2243608_-	MFS transporter	NA	NA	NA	NA
AVZ95060.1\|2243662_2246770_-	beta-galactosidase	L0N6M2	Herpes_simplex_virus	0.0e+00	59.6

DBSCAN-SWA_11

3231768 : 3243443

Escherichia_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVZ95976.1\|3231768_3232749_-\|transposase	IS5-like element ISKpn26 family transposase	Q38213	Escherichia_phage	8.9e-185	99.1
AVZ95977.1\|3232789_3233701_-	acyltransferase	NA	NA	NA	NA
AVZ95978.1\|3234063_3235230_-	UDP-glucose 6-dehydrogenase	M1I798	Paramecium_bursaria_Chlorella_virus	9.1e-112	54.7
AVZ95979.1\|3235409_3235964_-	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A291LA62	Escherichia_phage	2.9e-52	58.2
AVZ95980.1\|3235978_3236869_-	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	2.8e-28	34.2
AVZ95981.1\|3236900_3237770_-	glucose-1-phosphate thymidylyltransferase	I7I009	Enterobacteria_phage	1.7e-110	66.7
AVZ98194.1\|3237783_3238848_-	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	9.8e-105	54.7
AVZ95982.1\|3239002_3240373_-	phosphomannomutase	A0A127AWJ1	Bacillus_phage	6.4e-32	25.9
AVZ95983.1\|3240394_3241810_-	mannose-1-phosphate guanylyltransferase	A0A1V0SH58	Hokovirus	1.4e-53	31.0
AVZ95984.1\|3242036_3243443_-	phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating)	M4QQM4	Ostreococcus_lucimarinus_virus	4.7e-38	28.7

DBSCAN-SWA_12

3286788 : 3293693

Bacillus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVZ96013.1\|3286788_3288267_+	two-component system sensor histidine kinase BaeS	W8CYF6	Bacillus_phage	1.9e-29	28.3
AVZ96014.1\|3288263_3288986_+	two-component system response regulator BaeR	W8CYM9	Bacillus_phage	8.3e-31	33.2
AVZ96015.1\|3289304_3290666_+	U32 family peptidase	Q6DW11	Phage_TP	1.8e-207	94.8
AVZ98197.1\|3290911_3291805_+	lipid kinase YegS	A0A1V0SBJ0	Catovirus	6.1e-15	29.8
AVZ96016.1\|3292045_3292819_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.9e-26	36.7
AVZ98198.1\|3292829_3293693_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	7.4e-10	27.5

DBSCAN-SWA_13

3597090 : 3678781

Salmonella_phage(36.21%)

tRNA,holin,tail,protease,terminase,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVZ96277.1\|3597090_3599094_-\|tRNA	tRNA(Met) cytidine acetyltransferase	NA	NA	NA	NA
AVZ96278.1\|3599103_3599979_-	neutral zinc metallopeptidase	NA	NA	NA	NA
AVZ96279.1\|3600098_3600812_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A127KMU1	Cyanophage	1.1e-38	35.7
AVZ96280.1\|3601027_3602062_-	outer membrane protein assembly factor BamC	NA	NA	NA	NA
AVZ96281.1\|3602078_3602957_-	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA
AVZ96282.1\|3603044_3603677_+	glycine cleavage system transcriptional repressor	NA	NA	NA	NA
AVZ96283.1\|3603680_3604151_+	thioredoxin-dependent thiol peroxidase	NA	NA	NA	NA
AVZ96284.1\|3604212_3605274_-	AI-2E family transporter	NA	NA	NA	NA
AVZ96285.1\|3605496_3606960_+\|protease	beta-barrel assembly-enhancing protease	NA	NA	NA	NA
AVZ96286.1\|3606969_3607329_+	arsenate reductase (glutaredoxin)	NA	NA	NA	NA
AVZ96287.1\|3607456_3608368_+\|transposase	Rpn family recombination-promoting nuclease/putative transposase	Q2A0A7	Sodalis_phage	3.5e-74	58.8
AVZ96288.1\|3608364_3609066_-	DnaA inactivator Hda	NA	NA	NA	NA
AVZ96289.1\|3609164_3610451_-	uracil permease	Q9KX94	Enterobacteria_phage	1.9e-65	38.1
AVZ96290.1\|3610546_3611173_-	uracil phosphoribosyltransferase	NA	NA	NA	NA
AVZ96291.1\|3611390_3612824_-	6-phospho-beta-glucosidase	NA	NA	NA	NA
AVZ96292.1\|3612833_3613727_-	beta-glucoside kinase	NA	NA	NA	NA
AVZ96293.1\|3613990_3615028_+	phosphoribosylformylglycinamidine cyclo-ligase	Q58MH8	Prochlorococcus_phage	8.2e-72	44.5
AVZ96294.1\|3615024_3615666_+	phosphoribosylglycinamide formyltransferase	E3SNR5	Prochlorococcus_phage	1.2e-28	41.1
AVZ96295.1\|3615846_3617907_+	polyphosphate kinase 1	NA	NA	NA	NA
AVZ96296.1\|3617910_3619443_+	exopolyphosphatase	NA	NA	NA	NA
AVZ96297.1\|3619496_3621725_-	sensor domain-containing phosphodiesterase	NA	NA	NA	NA
AVZ96298.1\|3622077_3622269_+	DUF2633 family protein	G9L6F2	Escherichia_phage	3.3e-19	79.3
AVZ96299.1\|3622365_3623253_-	LysR family transcriptional regulator	NA	NA	NA	NA
AVZ96300.1\|3623350_3624583_+	MFS transporter	NA	NA	NA	NA
AVZ96301.1\|3624876_3626055_+	anaerobic sulfatase maturase	NA	NA	NA	NA
AVZ96302.1\|3626038_3627907_+	phosphatase	A0A2P0VMN7	Tetraselmis_virus	2.6e-07	22.6
AVZ96303.1\|3628093_3628594_-	DUF2514 domain-containing protein	Q858E9	Salmonella_phage	1.3e-59	76.9
AVZ96304.1\|3628590_3629220_-	glycoside hydrolase family 19 protein	Q858F0	Salmonella_phage	1.8e-90	76.9
AVZ96305.1\|3629209_3629515_-\|holin	phage holin family protein	A0A193GYK3	Enterobacter_phage	2.7e-39	81.4
AVZ96306.1\|3629501_3629906_-	hypothetical protein	T1SA79	Salmonella_phage	8.7e-54	81.1
AVZ96307.1\|3629992_3631309_-	right-handed parallel beta-helix repeat-containing protein	A0A0K2FI18	Enterobacter_phage	2.3e-34	32.3
AVZ96308.1\|3631386_3631527_+	ABC transporter	NA	NA	NA	NA
AVZ96309.1\|3632417_3633680_+\|transposase	IS1380 family transposase ISEc9	A0A1B0VDR3	Salmonella_phage	1.3e-39	100.0
AVZ96310.1\|3634548_3635529_+\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	1.0e-185	99.4
AVZ98213.1\|3635567_3635654_-	ABC transporter	NA	NA	NA	NA
AVZ96311.1\|3635642_3636776_+	hypothetical protein	NA	NA	NA	NA
AVZ96312.1\|3636816_3637080_-	hypothetical protein	NA	NA	NA	NA
AVZ96313.1\|3639907_3640204_+	hypothetical protein	T1SA06	Salmonella_phage	6.9e-24	63.9
AVZ96314.1\|3640302_3640455_+	transmembrane anchored protein	G9L6D9	Escherichia_phage	2.5e-14	83.7
AVZ96315.1\|3640489_3640684_-	hypothetical protein	Q858F7	Salmonella_phage	6.5e-15	67.2
AVZ96316.1\|3640680_3643437_-	hypothetical protein	Q858F8	Salmonella_phage	0.0e+00	95.4
AVZ96317.1\|3643436_3645347_-	hypothetical protein	Q858F9	Salmonella_phage	5.4e-287	82.7
AVZ96318.1\|3645346_3647881_-	hypothetical protein	Q858G0	Salmonella_phage	0.0e+00	84.1
AVZ96319.1\|3647891_3648431_-	hypothetical protein	A0A0F6TJ56	Escherichia_coli_O157_typing_phage	8.0e-71	80.0
AVZ96320.1\|3648430_3648895_-	hypothetical protein	Q858G2	Salmonella_phage	1.5e-70	81.2
AVZ96321.1\|3648894_3651372_-	hypothetical protein	Q858G3	Salmonella_phage	0.0e+00	84.4
AVZ96322.1\|3651371_3651977_-	hypothetical protein	A0A0F6TJN5	Escherichia_coli_O157_typing_phage	4.0e-87	77.0
AVZ96323.1\|3651976_3652300_-	hypothetical protein	G9L6C8	Escherichia_phage	5.3e-46	85.0
AVZ96324.1\|3652350_3652692_-	hypothetical protein	G9L6C7	Escherichia_phage	2.4e-36	70.8
AVZ96325.1\|3652702_3653140_-	hypothetical protein	A0A193GYT9	Enterobacter_phage	1.3e-66	91.7
AVZ96326.1\|3653193_3654180_-	hypothetical protein	A0A193GZ49	Enterobacter_phage	2.5e-179	94.2
AVZ96327.1\|3654194_3654875_-	peptidase	G9L6C4	Escherichia_phage	6.1e-76	84.0
AVZ96328.1\|3654877_3655174_-	hypothetical protein	T1SBI9	Salmonella_phage	1.2e-33	70.4
AVZ96329.1\|3655170_3656853_-\|tail	phage tail protein	A0A0F6TJD8	Escherichia_coli_O157_typing_phage	1.5e-264	84.4
AVZ96330.1\|3656867_3657074_-	hypothetical protein	T1SA67	Salmonella_phage	4.8e-08	88.2
AVZ96331.1\|3657535_3657778_-	hypothetical protein	NA	NA	NA	NA
AVZ96332.1\|3657827_3658199_+	hypothetical protein	A0A0F6TJP2	Escherichia_coli_O157_typing_phage	3.7e-59	91.9
AVZ96333.1\|3658242_3659718_-\|terminase	terminase	Q858H3	Salmonella_phage	6.4e-280	93.1
AVZ96334.1\|3659714_3660299_-\|terminase	terminase small subunit	T1SBI8	Salmonella_phage	2.2e-90	88.6
AVZ98214.1\|3660376_3660634_-	lF-82	NA	NA	NA	NA
AVZ96335.1\|3660786_3661038_+	hypothetical protein	NA	NA	NA	NA
AVZ96336.1\|3661037_3662522_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5
AVZ96337.1\|3662618_3662957_-	hypothetical protein	A0A193GYX4	Enterobacter_phage	1.8e-44	80.0
AVZ98215.1\|3662949_3663153_-	hypothetical protein	NA	NA	NA	NA
AVZ96338.1\|3663152_3663773_-	hypothetical protein	Q1MVF7	Enterobacteria_phage	1.0e-29	40.7
AVZ96339.1\|3663769_3664063_-	hypothetical protein	Q6UAT9	Klebsiella_phage	2.7e-44	86.6
AVZ98216.1\|3664062_3664530_-	hypothetical protein	A0A2R2Z312	Escherichia_phage	1.3e-37	51.7
AVZ96340.1\|3664823_3665468_-	hypothetical protein	Q1MVG0	Enterobacteria_phage	8.0e-110	79.3
AVZ96341.1\|3665464_3665656_-	hypothetical protein	NA	NA	NA	NA
AVZ96342.1\|3665639_3666050_-	hypothetical protein	A0A2P1MXC5	Escherichia_phage	4.3e-16	45.1
AVZ96343.1\|3666242_3666590_-	DUF1064 domain-containing protein	A0A0F6R8N5	Escherichia_coli_O157_typing_phage	6.5e-50	82.6
AVZ96344.1\|3666709_3667495_-	replication protein	A0A193GYX1	Enterobacter_phage	3.7e-133	87.7
AVZ96345.1\|3667491_3668259_-	primosomal protein	A0A193GZ86	Enterobacter_phage	8.9e-140	91.4
AVZ96346.1\|3668258_3668468_-	hypothetical protein	A0A193GYW4	Enterobacter_phage	1.8e-26	78.3
AVZ96347.1\|3668614_3668848_-	hypothetical protein	T1SAR5	Salmonella_phage	9.2e-24	66.2
AVZ96348.1\|3669002_3669584_+	XRE family transcriptional regulator	Q858D7	Salmonella_phage	7.1e-65	64.3
AVZ96349.1\|3669950_3670250_+	hypothetical protein	A0A0F6R7M4	Escherichia_coli_O157_typing_phage	2.1e-20	54.5
AVZ96350.1\|3670246_3671068_+	exodeoxyribonuclease VIII	A0A193GYK2	Enterobacter_phage	1.8e-130	80.2
AVZ96351.1\|3671064_3671946_+	recombinase RecT	T1SBJ5	Salmonella_phage	8.9e-136	84.3
AVZ96352.1\|3671994_3672243_+	AlpA family phage regulatory protein	A0A0F6TJ45	Escherichia_coli_O157_typing_phage	4.9e-31	76.8
AVZ96353.1\|3672352_3672646_+	PerC family transcriptional regulator	T1S9J5	Salmonella_phage	4.0e-32	71.1
AVZ96354.1\|3672638_3672797_+	DUF1317 family protein	T1SAR0	Salmonella_phage	1.1e-17	78.8
AVZ96355.1\|3672793_3673456_+	hypothetical protein	A0A059VF56	Pseudomonas_phage	1.2e-47	46.6
AVZ96356.1\|3673452_3674046_+	adenine methylase	T1SA14	Salmonella_phage	6.3e-109	91.9
AVZ96357.1\|3674042_3674285_+	hypothetical protein	NA	NA	NA	NA
AVZ96358.1\|3674227_3675478_-	DUF4102 domain-containing protein	A0A1X9TCT6	Enterobacter_phage	5.8e-205	84.4
AVZ96359.1\|3675669_3677247_-	GMP synthase (glutamine-hydrolyzing)	NA	NA	NA	NA
AVZ96360.1\|3677314_3678781_-	IMP dehydrogenase	A0A1V0SHK8	Klosneuvirus	1.2e-87	38.7

DBSCAN-SWA_14

3750131 : 3832641

Salmonella_phage(69.23%)

tRNA,capsid,head,portal,plate,lysis,tail,coat,transposase,integrase

attL 3794826:3794872|attR 3833181:3833227

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVZ96423.1\|3750131_3750869_-\|tRNA	tRNA (adenosine(37)-N6)-methyltransferase TrmM	NA	NA	NA	NA
AVZ96424.1\|3751000_3752332_+	ATP-dependent RNA helicase SrmB	E3T5E1	Cafeteria_roenbergensis_virus	6.2e-48	31.9
AVZ96425.1\|3752377_3752761_-	autonomous glycyl radical cofactor GrcA	A0A193GZ98	Escherichia_phage	4.0e-32	79.3
AVZ96426.1\|3753074_3753764_+	uracil-DNA glycosylase	A0A077BCN4	Equid_alphaherpesvirus	1.3e-57	53.0
AVZ96427.1\|3753821_3754907_-\|tRNA	tRNA/rRNA methyltransferase	NA	NA	NA	NA
AVZ96428.1\|3755110_3755536_+	thioredoxin TrxC	A0A1J0GW78	Streptomyces_phage	6.0e-13	40.2
AVZ96429.1\|3755605_3756304_+	DTW domain-containing protein	NA	NA	NA	NA
AVZ96430.1\|3756338_3758990_+	protein lysine acetyltransferase	NA	NA	NA	NA
AVZ96431.1\|3759110_3760466_+	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA
AVZ96432.1\|3760507_3760831_+	YfiM family lipoprotein	NA	NA	NA	NA
AVZ96433.1\|3760834_3762133_-	MFS transporter	Q6JIH2	Burkholderia_virus	3.1e-44	31.5
AVZ96434.1\|3768098_3770672_-	ATP-dependent chaperone ClpB	H6X3M6	Enterobacteria_phage	6.9e-128	35.4
AVZ96435.1\|3770801_3771533_-	peptidoglycan editing factor PgeF	NA	NA	NA	NA
AVZ96436.1\|3771529_3772510_-	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	NA	NA	NA	NA
AVZ96437.1\|3772641_3773379_+	outer membrane protein assembly factor BamD	NA	NA	NA	NA
AVZ96438.1\|3773649_3773985_+	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA
AVZ98218.1\|3774091_3774139_+	hypothetical protein	NA	NA	NA	NA
AVZ96439.1\|3774239_3775400_+	bifunctional chorismate mutase/prephenate dehydratase	NA	NA	NA	NA
AVZ96440.1\|3775396_3776269_-	SMP-30/gluconolactonase/LRE family protein	NA	NA	NA	NA
AVZ96441.1\|3776331_3777453_-	bifunctional chorismate mutase/prephenate dehydrogenase	NA	NA	NA	NA
AVZ96442.1\|3777462_3778533_-	3-deoxy-7-phosphoheptulonate synthase AroF	A0A0F6R6T6	Escherichia_coli_O157_typing_phage	1.8e-90	51.5
AVZ96443.1\|3778875_3779385_+	YfiR family protein	NA	NA	NA	NA
AVZ96444.1\|3779377_3780601_+	diguanylate cyclase	NA	NA	NA	NA
AVZ96445.1\|3780614_3781097_+	OmpA family protein	NA	NA	NA	NA
AVZ96446.1\|3781105_3782476_-	PepSY domain-containing protein	NA	NA	NA	NA
AVZ96447.1\|3782532_3782991_-	DUF2946 domain-containing protein	NA	NA	NA	NA
AVZ96448.1\|3783110_3783458_-	50S ribosomal protein L19	NA	NA	NA	NA
AVZ96449.1\|3783497_3784265_-\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
AVZ96450.1\|3784296_3784845_-	ribosome maturation factor RimM	NA	NA	NA	NA
AVZ96451.1\|3784863_3785112_-	30S ribosomal protein S16	NA	NA	NA	NA
AVZ96452.1\|3785371_3786736_-	signal recognition particle protein	NA	NA	NA	NA
AVZ96453.1\|3786899_3787691_+	inner membrane protein YpjD	NA	NA	NA	NA
AVZ96454.1\|3787710_3788997_+	DUF21 domain-containing protein	NA	NA	NA	NA
AVZ96455.1\|3789116_3789707_-	nucleotide exchange factor GrpE	NA	NA	NA	NA
AVZ96456.1\|3789831_3790710_+	NAD(+) kinase	NA	NA	NA	NA
AVZ96457.1\|3790796_3792458_+	DNA repair protein RecN	NA	NA	NA	NA
AVZ96458.1\|3792605_3792947_+	outer membrane protein assembly factor BamE	NA	NA	NA	NA
AVZ96459.1\|3793013_3793304_-	RnfH family protein	NA	NA	NA	NA
AVZ96460.1\|3793293_3793770_-	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA
AVZ96461.1\|3793880_3794363_+	SsrA-binding protein	W5RAM5	Staphylococcus_phage	2.3e-29	47.4
3794826:3794872	attL	NA	NA	NA	NA
AVZ96462.1\|3794966_3795344_+	hypothetical protein	NA	NA	NA	NA
AVZ96463.1\|3795371_3795590_-	levansucrase regulator	Q53ZE7	Salmonella_virus	1.9e-26	72.2
AVZ96464.1\|3795656_3796751_-	phage late control D family protein	E5G6Q3	Salmonella_phage	2.4e-170	83.6
AVZ96465.1\|3796747_3797233_-\|tail	phage tail protein	E5G6Q2	Salmonella_phage	5.2e-61	80.1
AVZ96466.1\|3797229_3799860_-\|tail	phage tail tape measure protein	E5FFG5	Burkholderia_phage	8.9e-115	41.9
AVZ96467.1\|3799852_3799972_-\|tail	GpE family phage tail protein	E5G6Q0	Salmonella_phage	2.2e-13	87.2
AVZ96468.1\|3799986_3800286_-\|tail	phage tail assembly protein	E5G6P9	Salmonella_phage	8.2e-33	78.0
AVZ96469.1\|3800338_3800854_-\|tail	phage major tail tube protein	E5G6P8	Salmonella_phage	1.4e-80	84.2
AVZ96470.1\|3800863_3802036_-\|tail	phage tail protein	A0A1S6KZY7	Salmonella_phage	3.4e-207	91.5
AVZ96471.1\|3802184_3803258_-\|tail	phage tail protein	A0A1S6KZZ8	Salmonella_phage	6.6e-40	53.6
AVZ96472.1\|3803309_3804428_-	hypothetical protein	A0A248XD67	Klebsiella_phage	4.4e-55	38.0
AVZ96473.1\|3804437_3806387_-\|coat	spore coat protein CotH	Q6QI97	Burkholderia_phage	1.0e-06	38.9
AVZ96474.1\|3806388_3807060_-\|tail	phage tail protein I	A0A1S6L000	Salmonella_phage	3.2e-61	58.9
AVZ96475.1\|3807052_3807961_-\|plate	baseplate assembly protein	E5G6N8	Salmonella_phage	1.9e-109	68.9
AVZ96476.1\|3807947_3808310_-\|plate	baseplate assembly protein	A0A1S6KZZ4	Salmonella_phage	8.4e-48	85.6
AVZ96477.1\|3808306_3808879_-\|plate	phage baseplate assembly protein V	E5G6N6	Salmonella_phage	1.4e-76	70.8
AVZ96478.1\|3808973_3809840_+	hypothetical protein	NA	NA	NA	NA
AVZ96479.1\|3809862_3810309_-	phage virion morphogenesis protein	A0A1S6L001	Salmonella_phage	2.5e-54	72.3
AVZ96480.1\|3810301_3810724_-\|tail	phage tail protein	A0A1S6KZY0	Salmonella_phage	8.2e-63	83.2
AVZ96481.1\|3810686_3810890_-	hypothetical protein	A0A1S6KZX6	Salmonella_phage	3.0e-23	77.6
AVZ96482.1\|3810819_3811248_-\|lysis	LysB family phage lysis regulatory protein	A0A1S6KZX8	Salmonella_phage	7.1e-54	82.5
AVZ96483.1\|3811244_3811628_-	hypothetical protein	A0A1S6KZZ2	Salmonella_phage	1.9e-18	45.4
AVZ96484.1\|3811632_3812142_-	lysozyme	E5G6N1	Salmonella_phage	1.6e-81	85.2
AVZ98219.1\|3812122_3812338_-	hypothetical protein	E5G6N0	Salmonella_phage	6.1e-30	88.7
AVZ96485.1\|3812341_3812545_-\|tail	phage tail protein	E5G6M9	Salmonella_phage	9.8e-30	89.6
AVZ96486.1\|3812544_3813009_-\|head	head completion/stabilization protein	A0A1S6KZW8	Salmonella_phage	1.5e-73	85.7
AVZ96487.1\|3813104_3813758_-	hypothetical protein	A0A1S6KZX1	Salmonella_phage	1.9e-90	80.0
AVZ96488.1\|3813761_3814814_-\|capsid	phage major capsid protein, P2 family	A0A1S6KZZ3	Salmonella_phage	6.8e-175	91.0
AVZ96489.1\|3814830_3815664_-\|capsid	GPO family capsid scaffolding protein	A0A1S6KZW9	Salmonella_phage	4.4e-100	77.6
AVZ96490.1\|3815804_3817568_+	oxidoreductase	A0A1S6KZW3	Salmonella_phage	0.0e+00	91.8
AVZ96491.1\|3817567_3818611_+\|portal	phage portal protein	A0A1S6KZW5	Salmonella_phage	3.1e-172	85.6
AVZ96492.1\|3818667_3818937_-	hypothetical protein	D2IZW1	Enterococcus_phage	1.4e-15	41.3
AVZ96493.1\|3819458_3820460_+	hypothetical protein	NA	NA	NA	NA
AVZ96494.1\|3820459_3821539_+	hypothetical protein	NA	NA	NA	NA
AVZ96495.1\|3821525_3822209_+	hypothetical protein	NA	NA	NA	NA
AVZ96496.1\|3822304_3822538_-	DinI family protein	A0A0M4S6H1	Salmonella_phage	2.0e-34	96.1
AVZ96497.1\|3822549_3822738_-	hypothetical protein	A0A1S6L006	Salmonella_phage	2.2e-23	90.3
AVZ96498.1\|3822845_3824330_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5
AVZ96499.1\|3824329_3824581_-	hypothetical protein	NA	NA	NA	NA
AVZ96500.1\|3824810_3827195_-	replication endonuclease	A0A1S6L028	Salmonella_phage	0.0e+00	87.9
AVZ96501.1\|3827191_3828043_-	DNA adenine methylase	A0A1S6L011	Salmonella_phage	2.2e-115	75.4
AVZ96502.1\|3828039_3828267_-	TraR/DksA family transcriptional regulator	A0A1S6L007	Salmonella_phage	5.1e-35	92.0
AVZ96503.1\|3828266_3828500_-	DUF2732 family protein	A0A1S6L021	Salmonella_phage	6.0e-31	90.9
AVZ96504.1\|3828567_3828906_-	hypothetical protein	A0A218M4I7	Erwinia_phage	6.2e-29	58.0
AVZ96505.1\|3828869_3829070_-	DUF2724 domain-containing protein	A0A1S6L005	Salmonella_phage	4.5e-19	68.8
AVZ96506.1\|3829077_3829587_-	hypothetical protein	A0A1S6L008	Salmonella_phage	1.1e-77	85.8
AVZ96507.1\|3829619_3829862_-	Rha family transcriptional regulator	A0A1S6KZZ6	Salmonella_phage	4.0e-38	98.8
AVZ96508.1\|3829984_3830614_+	phage repressor protein	A0A1S6KZZ7	Salmonella_phage	1.4e-61	54.5
AVZ96509.1\|3830616_3831615_+\|integrase	site-specific integrase	A0A1S6L016	Salmonella_phage	2.2e-183	94.5
AVZ96510.1\|3831660_3832641_+\|transposase	IS5-like element ISKpn26 family transposase	Q38213	Escherichia_phage	8.9e-185	99.1
3833181:3833227	attR	NA	NA	NA	NA

DBSCAN-SWA_15

4853351 : 4862226

Enterobacteria_phage(83.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVZ97475.1\|4853351_4855685_-	DNA primase	Q7M2A8	Enterobacteria_phage	0.0e+00	83.9
AVZ97476.1\|4855699_4856020_-	hypothetical protein	NA	NA	NA	NA
AVZ97477.1\|4856016_4856244_-	hypothetical protein	NA	NA	NA	NA
AVZ97478.1\|4856240_4856789_-	Ash-like/host cell division inhibitor Icd-like protein	Q7M2A7	Enterobacteria_phage	1.1e-30	69.4
AVZ97479.1\|4857612_4858350_+	glycoprotein 3	Q7M2A2	Enterobacteria_phage	1.1e-70	59.4
AVZ97480.1\|4858346_4858592_+	hypothetical protein	Q7M294	Enterobacteria_phage	5.5e-19	56.8
AVZ97481.1\|4858609_4859176_+	Polarity suppression protein	Q7M2A1	Enterobacteria_phage	9.7e-59	63.8
AVZ97482.1\|4859916_4860996_+	hypothetical protein	NA	NA	NA	NA
AVZ97483.2\|4861245_4862226_+\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	1.0e-185	99.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP028541

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. CP028542

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection