CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP032129	Acinetobacter sp. WCHAc010005 plasmid p3_010005, complete sequence	0 crisprs	NA	0	0	0	0
CP032133	Acinetobacter sp. WCHAc010005 plasmid pOXA58_010005, complete sequence	0 crisprs	PD-DExK	0	0	1	0
CP032134	Acinetobacter sp. WCHAc010005 chromosome, complete genome	2 crisprs	TnsE_C,csa3,RT,DEDDh,cas3,WYL,cas6f,cas7f,cas8f,cas3f,cas1	3	6	5	1
CP032132	Acinetobacter sp. WCHAc010005 plasmid pNDM1_010005, complete sequence	0 crisprs	NA	0	0	0	0
CP032131	Acinetobacter sp. WCHAc010005 plasmid p5_010005, complete sequence	0 crisprs	NA	0	0	0	0
CP032128	Acinetobacter sp. WCHAc010005 plasmid p2_010005, complete sequence	0 crisprs	NA	0	0	0	0
CP032127	Acinetobacter sp. WCHAc010005 plasmid p1_010005, complete sequence	0 crisprs	NA	0	0	0	0
CP032130	Acinetobacter sp. WCHAc010005 plasmid p4_010005, complete sequence	0 crisprs	NA	0	0	0	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

20732 : 29061

Burkholderia_virus(33.33%)

transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXY55221.1\|20732_21029_+	type II toxin-antitoxin system RelE/ParE family toxin	A4JWV2	Burkholderia_virus	1.2e-15	38.8
AXY55222.1\|21030_21321_+	putative addiction module antidote protein	A4JWV1	Burkholderia_virus	4.4e-15	48.9
AXY55255.1\|21350_21542_-	hypothetical protein	NA	NA	NA	NA
AXY55223.1\|21476_22802_+\|transposase	ISNCY family transposase	NA	NA	NA	NA
AXY55224.1\|22878_23193_-	cytoplasmic protein	NA	NA	NA	NA
AXY55225.1\|23155_23467_-	hypothetical protein	NA	NA	NA	NA
AXY55226.1\|23956_24982_+\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	2.1e-51	37.8
AXY55227.1\|25082_25862_+	aminoglycoside O-phosphotransferase APH(3')-VIa	E4ZFP6	Streptococcus_phage	1.5e-30	35.1
AXY55228.1\|25941_26967_+\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	1.2e-51	38.1
AXY55229.1\|27072_27372_-	lysine transporter LysE	NA	NA	NA	NA
AXY55230.1\|27916_29061_-\|transposase	IS3-like element ISAba14 family transposase	S5WIU1	Leptospira_phage	2.3e-14	28.1

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. CP032134

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CRISPR-Cas detection and classification

Crispr_ID: CP032134_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP032134_1

2038149-2038355

Orphan

I-F

Consensus_repeat	Method
TCTAAGCTGCCTACATGGCAGTGAAC	CRISPRCasFinder
TTTCTAAGCTGCCTATATGGCAGTGAACA	PILER-CR

3 spacers

The CRISPR arrays of CP032134_1

>merge|CP032134|1|2038149-2038355|CRISPRCasFinder,PILER-CR
TCTAAGCTGCCTACATGGCAGTGAACTAAATCATTGGTATCTGCCGATGGGTTGGGTTTTTCTAAGCTGCCTACATGGCAGTGAACAACGTGTAGCGATGACAACAGGTGTTGTTTTGTTTCTAAGCTGCCTATATGGCAGTGAACATTTCGGGAACGCAACTCATTGTCTGATAGTATTTCTAAGCTGCCTATATGGCAGTGAACA

>CP032134|1|1|2038149-2038354|CRISPRCasFinder
TCTAAGCTGCCTACATGGCAGTGAAC	TAAATCATTGGTATCTGCCGATGGGTTGGGTTTT
TCTAAGCTGCCTACATGGCAGTGAAC	AACGTGTAGCGATGACAACAGGTGTTGTTTTGTT
TCTAAGCTGCCTATATGGCAGTGAAC	ATTTCGGGAACGCAACTCATTGTCTGATAGTATT
TCTAAGCTGCCTATATGGCAGTGAAC

>CP032134|1|1|2038207-2038355|PILER-CR
TTTCTAAGCTGCCTACATGGCAGTGAACA	ACGTGTAGCGATGACAACAGGTGTTGTTTTG
TTTCTAAGCTGCCTATATGGCAGTGAACA	TTTCGGGAACGCAACTCATTGTCTGATAGTA
TTTCTAAGCTGCCTATATGGCAGTGAACA

Protein	Signature genes	Signature genes Name	Protein_function
CP032134.1\|AXY56994.1\|2041787_2042552_-\|glutathione-S-transferase-family-protein	unknown	unknown	gnl\|CDD\|379176
CP032134.1\|AXY58450.1\|2030854_2031949_+\|tRNA-epoxyqueuosine(34)-reductase-QueG	unknown	unknown	gnl\|CDD\|272993
CP032134.1\|AXY56987.1\|2035001_2036624_+\|long-chain-fatty-acid--CoA-ligase	unknown	unknown	gnl\|CDD\|341284
CP032134.1\|AXY56992.1\|2040260_2041010_+\|YebC/PmpR-family-DNA-binding-transcriptional-regulator	unknown	unknown	gnl\|CDD\|234640
CP032134.1\|AXY56997.1\|2044651_2045356_+\|Crp/Fnr-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223736
CP032134.1\|AXY56983.1\|2029304_2030822_-\|NAD(P)H-hydrate-dehydratase	unknown	unknown	gnl\|CDD\|182554
CP032134.1\|AXY57000.1\|2047174_2047516_+\|L-valine-transporter-subunit-YgaH	unknown	unknown	gnl\|CDD\|182434
CP032134.1\|AXY56999.1\|2046432_2047173_+\|branched-chain-amino-acid-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224215
CP032134.1\|AXY56996.1\|2043993_2044536_-\|DUF962-domain-containing-protein	unknown	unknown	gnl\|CDD\|226914
CP032134.1\|AXY56995.1\|2042826_2043918_+\|redox-regulated-ATPase-YchF	unknown	unknown	gnl\|CDD\|236583
CP032134.1\|AXY56989.1\|2037244_2037472_-\|hypothetical-protein	unknown	unknown	unknown
CP032134.1\|AXY56986.1\|2034476_2034767_+\|hypothetical-protein	unknown	unknown	unknown
CP032134.1\|AXY56984.1\|2032252_2033242_+\|biotin-synthase-BioB	unknown	unknown	gnl\|CDD\|185063
CP032134.1\|AXY56985.1\|2033420_2033630_-\|hypothetical-protein	unknown	unknown	unknown
CP032134.1\|AXY56998.1\|2045846_2046329_-\|hypothetical-protein	unknown	unknown	unknown
CP032134.1\|AXY56982.1\|2029007_2029280_-\|acylphosphatase	unknown	unknown	gnl\|CDD\|376373
CP032134.1\|AXY56991.1\|2039584_2040148_+\|acyltransferase	unknown	unknown	gnl\|CDD\|153250
CP032134.1\|AXY56988.1\|2036748_2036970_-\|hypothetical-protein	unknown	unknown	unknown
CP032134.1\|AXY56990.1\|2037645_2037861_-\|cold-shock-protein	unknown	unknown	gnl\|CDD\|224197
CP032134.1\|AXY56993.1\|2041091_2041565_-\|Lrp/AsnC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224439

Protein	Function_ID	Function_description	E-value
CP032134.1\|AXY56994.1\|2041787_2042552_-\|glutathione-S-transferase-family-protein	gnl\|CDD\|379176	pfam13417, GST_N_3, Glutathione S-transferase, N-terminal domain.	1.29658e-15
CP032134.1\|AXY56990.1\|2037645_2037861_-\|cold-shock-protein	gnl\|CDD\|224197	COG1278, CspC, Cold shock proteins [Transcription].	3.8517e-33
CP032134.1\|AXY56987.1\|2035001_2036624_+\|long-chain-fatty-acid--CoA-ligase	gnl\|CDD\|341284	cd12119, ttLC_FACS_AlkK_like, Fatty acyl-CoA synthetases similar to LC-FACS from Thermus thermophiles. This family includes fatty acyl-CoA synthetases that can activate medium-chain to long-chain fatty acids. They catalyze the ATP-dependent acylation of fatty acids in a two-step reaction. The carboxylate substrate first reacts with ATP to form an acyl-adenylate intermediate, which then reacts with CoA to produce an acyl-CoA ester. The fatty acyl-CoA synthetases are responsible for fatty acid degradation as well as physiological regulation of cellular functions via the production of fatty acyl-CoA esters. The fatty acyl-CoA synthetase from Thermus thermophiles in this family catalyzes the long-chain fatty acid, myristoyl acid, while another member in this family, the AlkK protein identified from Pseudomonas oleovorans, targets medium chain fatty acids. This family also includes uncharacterized FACS proteins.	0
CP032134.1\|AXY56992.1\|2040260_2041010_+\|YebC/PmpR-family-DNA-binding-transcriptional-regulator	gnl\|CDD\|234640	PRK00110, PRK00110, YebC/PmpR family DNA-binding transcriptional regulator.	5.22686e-145
CP032134.1\|AXY56983.1\|2029304_2030822_-\|NAD(P)H-hydrate-dehydratase	gnl\|CDD\|182554	PRK10565, PRK10565, putative carbohydrate kinase; Provisional.	2.47659e-87
CP032134.1\|AXY57000.1\|2047174_2047516_+\|L-valine-transporter-subunit-YgaH	gnl\|CDD\|182434	PRK10408, PRK10408, L-valine transporter subunit YgaH.	4.20622e-43
CP032134.1\|AXY56996.1\|2043993_2044536_-\|DUF962-domain-containing-protein	gnl\|CDD\|226914	COG4539, COG4539, Predicted membrane protein [Function unknown].	1.62262e-48
CP032134.1\|AXY56991.1\|2039584_2040148_+\|acyltransferase	gnl\|CDD\|153250	cd07988, LPLAT_ABO13168-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown ABO13168. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are uncharacterized phospholipid/glycerol acyltransferases such as the Acinetobacter baumannii ATCC 17978 locus ABO13168 putative acyltransferase, and similar proteins.	5.21862e-57
CP032134.1\|AXY56995.1\|2042826_2043918_+\|redox-regulated-ATPase-YchF	gnl\|CDD\|236583	PRK09601, PRK09601, redox-regulated ATPase YchF.	0
CP032134.1\|AXY56984.1\|2032252_2033242_+\|biotin-synthase-BioB	gnl\|CDD\|185063	PRK15108, PRK15108, biotin synthase; Provisional.	0
CP032134.1\|AXY56999.1\|2046432_2047173_+\|branched-chain-amino-acid-ABC-transporter-permease	gnl\|CDD\|224215	COG1296, AzlC, Predicted branched-chain amino acid permease (azaleucine resistance) [Amino acid transport and metabolism].	9.54049e-41
CP032134.1\|AXY56982.1\|2029007_2029280_-\|acylphosphatase	gnl\|CDD\|376373	pfam00708, Acylphosphatase, Acylphosphatase.	4.35997e-24
CP032134.1\|AXY58450.1\|2030854_2031949_+\|tRNA-epoxyqueuosine(34)-reductase-QueG	gnl\|CDD\|272993	TIGR00276, iron-sulfur_cluster-binding_protein, epoxyqueuosine reductase. This model was rebuilt to exclude archaeal homologs, now that there is new information that bacterial members are epoxyqueuosine reductase, QueG, involved in queuosine biosynthesis for tRNA maturation. [Protein synthesis, tRNA and rRNA base modification].	0
CP032134.1\|AXY56997.1\|2044651_2045356_+\|Crp/Fnr-family-transcriptional-regulator	gnl\|CDD\|223736	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms].	3.55111e-36
CP032134.1\|AXY56993.1\|2041091_2041565_-\|Lrp/AsnC-family-transcriptional-regulator	gnl\|CDD\|224439	COG1522, Lrp, Transcriptional regulators [Transcription].	5.36307e-28

>CP032134.1|AXY56990.1|2037645_2037861_-|cold-shock-protein
MSNSNVVKGTVKWFNETKGFGFIQPESGPDVFAHFSEITGSGFKTLTEGQKVEFSVAQGQKGPTAVNIVAL
>CP032134.1|AXY56989.1|2037244_2037472_-|hypothetical-protein
MLKTNNLIAKSNNGTEIVVSLIPLIKMQNTCQGSKKIEVGKRVLLQSGTVVDLNLDGRSFYTSLHQLFKLSQKVI
>CP032134.1|AXY56988.1|2036748_2036970_-|hypothetical-protein
MKNLKTALIVLISAASLTLVACGKKQEEQAPAQEQATSEVNETAVSSVEVNPDEIDAAPMPEEYNTPAASEAK
>CP032134.1|AXY56987.1|2035001_2036624_+|long-chain-fatty-acid--CoA-ligase
MHGRMMFQPLLISNLLDHAARYHGDTAIISKNTDGSISKTDWTHVSENSKRFANALKNLGVQMHDRVATIAWNNHRHLESWYAISGSGFVCHTINPRLFPEQLIFIINDAKDRVVLFDKTFLPLITGVKAHIPQVEHFICLGAFDQDVADALPEVKFYDVLIAENSDQFEWPEFDENTASSLCYTSGTTGNPKGALYSHRSTVLHTYAICLPDSLNLSASDVMLPVVPMFHVNAWGTPYAAAMVGCTVVLPGPGLDGASLVQMIDEYKVTVALGVPTIWQGLLAAAKQAGSVLPSLQRNVVGGSACPPAMMKAFRDLFNCETIHAWGMTEMSPLGTSNQLKAKHRNLSEDEQFKIRLSQGRPPFGVDLRITTEEKGTTEVTRDGHNTGNLQVKGHWIISTYFGKDESALTSDGWFDTGDIASLNEDGYLYLSDRAKDLIKSGGEWISSVELENIAMGHPEIAMAAVIAAKHSKWDERPIVIAIKHKDAQITEEGLLEYFADKVAKWQIPDKAIFVEAIPLSGTGKMLKKDLREKYDSVLL
>CP032134.1|AXY56986.1|2034476_2034767_+|hypothetical-protein
MTTYMIQYEMFKKRDSAPLKQRIEKLGIEAKITPMSHLWLIRSQLDSSEIRDQLLPFIDAKDKLFVVRVDTDDWASWNLNDKEVSWLNQHISVSES
>CP032134.1|AXY56985.1|2033420_2033630_-|hypothetical-protein
MNKDFSALTYIVDESLADTLCWLVRHQDCFDAFEFDVEHQELKVHHANGTDIIRKGMYLNAGYGLLVTS
>CP032134.1|AXY56984.1|2032252_2033242_+|biotin-synthase-BioB
MTVRNDWTREEIQRLYEQPFMDLVFQAQQIHREHFDANTIQVSTLLSIKTGKCPEDCKYCSQSARYDSKLEAEKRIAVDKVISEAKEALASGSSRFCMGAAWRNPHERDMPYVLEMVREVKSLGLETCMTLGMLNQSQAERLHEAGLDYYNHNLDTSREYYSHIISTRTFDDRLDTLDHVRNAGMKVCSGGIVGLGEDRKDRIGLLHELSTLPVHPESVPINMLVPIEGTPLADVEKLDVTEWIRTIAVARITMPESYIRLSAGRESLSDSDQALAFLAGANSLFSGEKLLTTPNAGDGRDKQLFQKLGLQAEKAKPGLAELTVDAMAV
>CP032134.1|AXY58450.1|2030854_2031949_+|tRNA-epoxyqueuosine(34)-reductase-QueG
MSASTSKPQISLQEIDPHELKVWIKAQALQLGFADCVIARPDAQAELPRFKEYLKRGYHGDMKFLEENLEKRANPALLVPGTRSIICVRMNYLVETPKPRYVPDEPNNAIIARYARGRDYHKVMRGRLKTLAGLIKDRTGEFESRPFADSAPVFEKSLAENAGMGWTGKHTLLIHKKSGSFFVLGELFTSLDLPFDEPATAHCGSCTACIDICPTQAIVEPYMLDARKCIAYLTIEYKGIIPEELRRGIGNRVFGCDDCQLICPWNSFAKKASIDDFNPRHDLDRLTLLDLWHWDETTFLNCTEGSPIRRTGYQSFMRNIAIGLGNAPYSQQIIDALQHNRALHDDIVQIHIDWAIAEQLSKRT
>CP032134.1|AXY56983.1|2029304_2030822_-|NAD(P)H-hydrate-dehydratase
MSQQVYHSHDIQAWEQRWFAQQNSSFGLMQQVAWSIAQRLDIWFQQTASSESVSHAGYGVRSIAVWCGAGNNAGDGYCLAAYLKNMGYQVEIFAVPPGASADLNQAVEVASNHQVQIHSHFEISKDFDCHIDALFGIGLNRELDLSWQQLIQLFNAQSGLKVAVDIPSGLNVNSGQPLPCAVKADRTFTVLGLKAGLFTGQGKEFSGQIEVISAIPVDNRLKPLARLSSTQIQLPVRQAFGHKGSYGHVLVVGGHAEMGGAVMMAAESAFSAGAGKVTIVCHAKHHTAILSRSPNIMLRDIDALSVSEIQALTEHVDAVCFGMGLGRDEWAAQQFAQWFQVIHQSSHLQVVLDADALWFLAEQPVRLKAQCYATPHPGEAAKLLNCRVAEIENDRIEAIQQLQQKYSGQWVLKGAGSLTLQNPDDLWICTAGNAGMGTGGMGDVLAGMIASLKAQFAERIQLHEIVTLHALAGDHLALKGQRGLQAQHMNEAVYYVVNHDHKNHQ
>CP032134.1|AXY56982.1|2029007_2029280_-|acylphosphatase
MQAVKLLIHGKVQGVGYRRWFEKEAIALNLKGYVKNLENGDVEAVIIGTEQSVATIIRHAYVGPLRASVSSIQQEQLAEDAPFTDFKMLR
>CP032134.1|AXY56991.1|2039584_2040148_+|acyltransferase
MLKKLIGNATFKLSGWSYHVEPDVLENKQVIVGFEHTSMMDAVLSLALFQIYDIKIHTLIKKELFKGPFKPVLEAIGGIAVDRNSSKDIVSQMVEHFEKNEKFNLVIAPEATRAKKDEVRKPIRTGFWHIAKAANVPIVLMYANSRTQKGGIFGKIYPTELEHDLVLMKKLYKEHTGLDIIIPDTKK
>CP032134.1|AXY56992.1|2040260_2041010_+|YebC/PmpR-family-DNA-binding-transcriptional-regulator
MAGHSKWANIKHRKAKQDASRGKVFTKYIRELVTAAKLGGPDAASNPRLRAVVEKALSVNMTRDVINRAIQRGAGGEDNDDLKEVTYEGYGVGGVAVIVETMTDNLNRTVPDVRHCFSKTDGNLGTNGSVAFLFTKRGEITFEDVSLEDQIMDIALEAGAEDIEVDEDEILVITTPETFGVVQDALTAAGLKSDNAEVVMSPSTKAEITDIDQAKKIMKMIDMLEDLDDVQNVYTNVEFSDAVLAELEA
>CP032134.1|AXY56993.1|2041091_2041565_-|Lrp/AsnC-family-transcriptional-regulator
MELDRYDKQILEILTHEDINLNELSERISLSVSSVHRRIKHLIETNVMTHLKRDINYEKLGFKLHVILQVSLSKHDTDTFAKFLEELENIPEVINAFLVTGQTADFLVEVVAKDMENYSEILLKRIGKIEHVVALHSSFVIKEYNHVFNCTGLLSKV
>CP032134.1|AXY56994.1|2041787_2042552_-|glutathione-S-transferase-family-protein
MRILYQFPLSHFCEKARWLLDYKELDFVAQNLIPGVHRAFAQLKTGQNTLPILKDQEKWISDSTQIALYLDELYPEHTLLRSDPELRESALEVNAIATELGQHVRRWGLSHALSDGGESLEILIGEKGYLRQFEKYSKPLIKALMAKGYKVDSEKVIQSREKMDILVAELNQRLNNNGGRYFVGDRLGLADIAVCSMLAPLLEIEGTPWEKEHGENQSEEFRNYKNFLAELPLGQYVQRIYMTERRARVDWRGI
>CP032134.1|AXY56995.1|2042826_2043918_+|redox-regulated-ATPase-YchF
MGFNCGIVGLPNVGKSTLFNALTKAAIAAENFPFCTIEPNTGIVPVPDPRLDKLTEIVKPQRVIPTTMEFVDIAGLVAGASKGEGLGNQFLANIRETDAIAHVVRCFEDENVIHVNGKIDPLDDIATINTELALADLDTVAKALLRLTKAAKGGDKEAIATKAVLEKIQPLLDEGKPARAADLDDDERKAVRGFGLMTLKPTMYIANVAEDGFENNPHLEAVKKLAAEENAIVVPLCNQIEAEISLLEDEDRAEFLEALGMEEPGLNVVIRAGYSLLGLQTYFTAGVQEVRAWTVKVGATAPQAAGVIHTDFEKGFIRAECVAYDDFVQYNGENGAKEAGKWRLEGKTYVVQDGDVLHFRFNV
>CP032134.1|AXY56996.1|2043993_2044536_-|DUF962-domain-containing-protein
MTKLEKLLSQYAAYHLDHKNIYTHFVGIPMIVFSIICLTARAGVMVYGFELTLALLLIVLSVIYYLSLDRIFGVIMLVLFSVAYPFAYKIAQWDTVTWLSSSVGIFVVGWVFQFVGHYYEKKKPAFVDDLIGLAIGPLFVLAEFVFLLGFRKDIQQRMLVEARKQRAEMDLKTMHTASGQ
>CP032134.1|AXY56997.1|2044651_2045356_+|Crp/Fnr-family-transcriptional-regulator
MFSQNNTDQLSNNLWFSNLDLNLQQYILKNAVIQHYEKDQTIFQMGNLFDGIYAVLTGSVRLGYIDIEGNESVAAYVEPIMWFGEISLVDKLPRSHNAVATQKCEILYLSDTAIQTLLQQNPGFWFHIAQLTSQKLRHAFLELISIQTQTISQRLAQRLLFILQGYGNHAQIEQKEIHFSQEQLAQMLMCSRQTINQELQQLERKGIIRIAFKKIEIINFAELHQIAHSHHEKS
>CP032134.1|AXY56998.1|2045846_2046329_-|hypothetical-protein
MLTFNSKSVLFTSLVGVILLLQACSKPAQEPAEQVEIKAAPKLSNDATTYANEAWKFINEVDAVVYAKKINEIDEKVRKPARKLSTDWRINVKMTDSVTEGKYALCRKALTSLDTWARETVENTGSVAHKQADYERDKAQCKDAIANPALGNTKPHTNLF
>CP032134.1|AXY56999.1|2046432_2047173_+|branched-chain-amino-acid-ABC-transporter-permease
MSEHKISSVQPAGFWQGAKDSQAIIFTYLPVSFAFGVSATQFGFTAWEALFLSCSMYAGASQFLVVALLGSGTSIWMTALTVIALDIRHLLYGPALQNLIQDKLNLKKTAIWSWGLTDEVFASGMIKLSQRRQEWSESWMLGLSLFSWLSWALGSFLGGLFADQVTQLPQFLQAALDFLLPALFLSFLLAAFEKKHTFVVAVSLIVSAFACYFISMSAAIFIGITSGIFAGLFKHYVLKQHDETGI
>CP032134.1|AXY57000.1|2047174_2047516_+|L-valine-transporter-subunit-YgaH
MDLHIIAVGILVGIANFASRFGPFYVIQKSQQNTQARGSTWLKVALGSIGIAAISSMLVVATLPPLIETPDKSFAMLVGFIVLAGLYFKFKRIVLATLTAALAYGLVYTYFPI

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Click the colored protein region to show detailed information

Crispr_ID: CP032134_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP032134_2

2202299-2203108

TypeI-F

I-F:NA

Consensus_repeat	Method
TTTCTAAGCTGCCTANANNTGGCAGTGAAC	CRT
TTTCTAAGCTGCCTACATGGCAGTGAAC	PILER-CR
TTTCTAAGCTGCCTACATGGCAGTGAAC	CRISPRCasFinder

13 spacers

cas6f,cas7f,cas8f,cas3f,cas1

The CRISPR arrays of CP032134_2

>merge|CP032134|2|2202299-2203108|CRT,PILER-CR,CRISPRCasFinder
TGTCTAAGCTGCCTATATATGGCAGTGAACTAAAGCCGGTCTGTTGAATCATTCAAAATTCTTTTCTAAGCTGCCTACATGGCAGTGAACCACCGAGATAAGACAAGAAATAAGCACCAAGATTTCTAAGCTGCCTACATGGCAGTGAACCGTGAAGATGTATTCAGATTACGAAGATCGAATTTCTAAGCTACCTATATGGCAGTGAACTTAATATTGAACGGCACCTGACGCATACGCGGTTTCTAAGCTGCCTATATGGCAGTGAACAAGAAAAATTCAAAGGATGTATTGGTTTTGGTTTTCTAAGCTGCCTATATGGCAGTGAACTTGAAACTGAATTTACATTTACTTATGAAATATTTCTAAGCTGCCTATATGGCAGTGAACCTTGGGGGCTTTCTCAGCTTAATTCGTTTCACTTTCTAAGCTGCCTACATGGCAGTGAACCTCGACCTGACATCACTGCTCATCACTGTACTTTTCTAAGCTGCCTACATGGCAGTGAACGCAGACATGTACAGGTTAAATGTGCTCAAAAATTTCTAAGCTGCCTACATGGCAGTGAACTTATATACGTGCCTGTTCATATTTCTTTACCGTTTCTAAGCTGCCTACATGGCAGTGAACATAAGATCTGCATCTTGCAGACGGGAGTGCATTTTCTAAGCTGCCTACATGGCAGTGAACATCCAATTATCTGCAGGGTTATAAAAATCACATTTCTAAGCTGCCTACATGGCAGTGAACCTTTCATACGTTCCTGCTCGAAACTGGTTTCATTTCTAAGCTGCCTACATGGCAGTGAAC

>CP032134|2|1|2202299-2203108|CRT
TGTCTAAGCTGCCTATATATGGCAGTGA	ACTAAAGCCGGTCTGTTGAATCATTCAAAATTCT
TTTCTAAGCTGCCTACATGGCAGTGAAC	CACCGAGATAAGACAAGAAATAAGCACCAAGA
TTTCTAAGCTGCCTACATGGCAGTGAAC	CGTGAAGATGTATTCAGATTACGAAGATCGAA
TTTCTAAGCTACCTATATGGCAGTGAAC	TTAATATTGAACGGCACCTGACGCATACGCGG
TTTCTAAGCTGCCTATATGGCAGTGAAC	AAGAAAAATTCAAAGGATGTATTGGTTTTGGT
TTTCTAAGCTGCCTATATGGCAGTGAAC	TTGAAACTGAATTTACATTTACTTATGAAATA
TTTCTAAGCTGCCTATATGGCAGTGAAC	CTTGGGGGCTTTCTCAGCTTAATTCGTTTCAC
TTTCTAAGCTGCCTACATGGCAGTGAAC	CTCGACCTGACATCACTGCTCATCACTGTACT
TTTCTAAGCTGCCTACATGGCAGTGAAC	GCAGACATGTACAGGTTAAATGTGCTCAAAAA
TTTCTAAGCTGCCTACATGGCAGTGAAC	TTATATACGTGCCTGTTCATATTTCTTTACCG
TTTCTAAGCTGCCTACATGGCAGTGAAC	ATAAGATCTGCATCTTGCAGACGGGAGTGCAT
TTTCTAAGCTGCCTACATGGCAGTGAAC	ATCCAATTATCTGCAGGGTTATAAAAATCACA
TTTCTAAGCTGCCTACATGGCAGTGAAC	CTTTCATACGTTCCTGCTCGAAACTGGTTTCA
TTTCTAAGCTGCCTACATGGCAGTGAAC

>CP032134|2|2|2202361-2203108|PILER-CR
TTTCTAAGCTGCCTACATGGCAGTGAAC	CACCGAGATAAGACAAGAAATAAGCACCAAGA
TTTCTAAGCTGCCTACATGGCAGTGAAC	CGTGAAGATGTATTCAGATTACGAAGATCGAA
TTTCTAAGCTACCTATATGGCAGTGAAC	TTAATATTGAACGGCACCTGACGCATACGCGG
TTTCTAAGCTGCCTATATGGCAGTGAAC	AAGAAAAATTCAAAGGATGTATTGGTTTTGGT
TTTCTAAGCTGCCTATATGGCAGTGAAC	TTGAAACTGAATTTACATTTACTTATGAAATA
TTTCTAAGCTGCCTATATGGCAGTGAAC	CTTGGGGGCTTTCTCAGCTTAATTCGTTTCAC
TTTCTAAGCTGCCTACATGGCAGTGAAC	CTCGACCTGACATCACTGCTCATCACTGTACT
TTTCTAAGCTGCCTACATGGCAGTGAAC	GCAGACATGTACAGGTTAAATGTGCTCAAAAA
TTTCTAAGCTGCCTACATGGCAGTGAAC	TTATATACGTGCCTGTTCATATTTCTTTACCG
TTTCTAAGCTGCCTACATGGCAGTGAAC	ATAAGATCTGCATCTTGCAGACGGGAGTGCAT
TTTCTAAGCTGCCTACATGGCAGTGAAC	ATCCAATTATCTGCAGGGTTATAAAAATCACA
TTTCTAAGCTGCCTACATGGCAGTGAAC	CTTTCATACGTTCCTGCTCGAAACTGGTTTCA
TTTCTAAGCTGCCTACATGGCAGTGAAC

>CP032134|2|2|2202361-2203108|CRISPRCasFinder
TTTCTAAGCTGCCTACATGGCAGTGAAC	CACCGAGATAAGACAAGAAATAAGCACCAAGA
TTTCTAAGCTGCCTACATGGCAGTGAAC	CGTGAAGATGTATTCAGATTACGAAGATCGAA
TTTCTAAGCTACCTATATGGCAGTGAAC	TTAATATTGAACGGCACCTGACGCATACGCGG
TTTCTAAGCTGCCTATATGGCAGTGAAC	AAGAAAAATTCAAAGGATGTATTGGTTTTGGT
TTTCTAAGCTGCCTATATGGCAGTGAAC	TTGAAACTGAATTTACATTTACTTATGAAATA
TTTCTAAGCTGCCTATATGGCAGTGAAC	CTTGGGGGCTTTCTCAGCTTAATTCGTTTCAC
TTTCTAAGCTGCCTACATGGCAGTGAAC	CTCGACCTGACATCACTGCTCATCACTGTACT
TTTCTAAGCTGCCTACATGGCAGTGAAC	GCAGACATGTACAGGTTAAATGTGCTCAAAAA
TTTCTAAGCTGCCTACATGGCAGTGAAC	TTATATACGTGCCTGTTCATATTTCTTTACCG
TTTCTAAGCTGCCTACATGGCAGTGAAC	ATAAGATCTGCATCTTGCAGACGGGAGTGCAT
TTTCTAAGCTGCCTACATGGCAGTGAAC	ATCCAATTATCTGCAGGGTTATAAAAATCACA
TTTCTAAGCTGCCTACATGGCAGTGAAC	CTTTCATACGTTCCTGCTCGAAACTGGTTTCA
TTTCTAAGCTGCCTACATGGCAGTGAAC

Protein	Signature genes	Signature genes Name	Protein_function
CP032134.1\|AXY57121.1\|2200572_2201994_+\|cysteine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234705
CP032134.1\|AXY57120.1\|2197613_2198153_-\|HAD-IIIA-family-hydrolase	unknown	unknown	gnl\|CDD\|224692
CP032134.1\|AXY57113.1\|2190017_2190614_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224653
CP032134.1\|AXY57116.1\|2194049_2195582_-\|RND-transporter	unknown	unknown	gnl\|CDD\|273829
CP032134.1\|AXY57124.1\|2205768_2207049_-\|type-I-F-CRISPR-associated-protein-Csy1	cas8f	cd09735_cas8f_CAS-I-F	gnl\|CDD\|378220
CP032134.1\|AXY57123.1\|2203844_2204858_-\|type-I-F-CRISPR-associated-protein-Csy3	cas7f	pfam09615_cas7f_CAS-I-F	gnl\|CDD\|378222
CP032134.1\|AXY57125.1\|2210435_2211401_-\|type-I-F-CRISPR-associated-endonuclease-Cas1	cas1	cd09718_cas1_CAS-I-F	gnl\|CDD\|132676
CP032134.1\|AXY57122.1\|2203239_2203842_-\|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4	cas6f	cd09739_cas6f_CAS-I-F:CAS-IV	gnl\|CDD\|378224
CP032134.1\|AXY57117.1\|2195729_2196476_-\|LPS-export-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|275199
CP032134.1\|AXY58462.1\|2198156_2199134_-\|KpsF/GutQ-family-sugar-phosphate-isomerase	unknown	unknown	gnl\|CDD\|182814
CP032134.1\|AXY57114.1\|2190727_2191918_-\|HlyD-family-type-I-secretion-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|130902
CP032134.1\|AXY57118.1\|2196475_2197042_-\|lipopolysaccharide-transport-periplasmic-protein-LptA	unknown	unknown	gnl\|CDD\|274384
CP032134.1\|AXY57128.1\|2213638_2215192_-\|DUF2271-domain-containing-protein	unknown	unknown	gnl\|CDD\|224394
CP032134.1\|AXY57115.1\|2191914_2194053_-\|type-I-secretion-system-permease/ATPase	unknown	unknown	gnl\|CDD\|274550
CP032134.1\|AXY58463.1\|2207061_2210436_-\|type-I-F-CRISPR-associated-helicase-Cas3	cas3f	cd09673_cas3f_CAS-I-F	gnl\|CDD\|187804
CP032134.1\|AXY57127.1\|2213016_2213610_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|374499
CP032134.1\|AXY57130.1\|2216257_2217757_-\|succinate-CoA-transferase	unknown	unknown	gnl\|CDD\|274588
CP032134.1\|AXY57126.1\|2211538_2213011_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|99797
CP032134.1\|AXY57119.1\|2197028_2197574_-\|LPS-export-ABC-transporter-periplasmic-protein-LptC	unknown	unknown	gnl\|CDD\|369103
CP032134.1\|AXY57129.1\|2215297_2216185_+\|DUF4198-domain-containing-protein	unknown	unknown	gnl\|CDD\|378467

Protein	Function_ID	Function_description	E-value
CP032134.1\|AXY57121.1\|2200572_2201994_+\|cysteine--tRNA-ligase	gnl\|CDD\|234705	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated.	0
CP032134.1\|AXY57120.1\|2197613_2198153_-\|HAD-IIIA-family-hydrolase	gnl\|CDD\|224692	COG1778, COG1778, Low specificity phosphatase (HAD superfamily) [General function prediction only].	9.61178e-68
CP032134.1\|AXY57113.1\|2190017_2190614_-\|hypothetical-protein	gnl\|CDD\|224653	COG1739, COG1739, Uncharacterized conserved protein [Function unknown].	1.97036e-53
CP032134.1\|AXY57116.1\|2194049_2195582_-\|RND-transporter	gnl\|CDD\|273829	TIGR01844, Proteases_secretion_protein_PrtF, type I secretion outer membrane protein, TolC family. Members of this model are outer membrane proteins from the TolC subfamily within the RND (Resistance-Nodulation-cell Division) efflux systems. These proteins, unlike the NodT subfamily, appear not to be lipoproteins. All are believed to participate in type I protein secretion, an ABC transporter system for protein secretion without cleavage of a signal sequence, although they may, like TolC, participate also in the efflux of smaller molecules as well. This family includes the well-documented examples TolC (E. coli), PrtF (Erwinia), and AprF (Pseudomonas aeruginosa). [Protein fate, Protein and peptide secretion and trafficking, Transport and binding proteins, Porins].	6.02838e-55
CP032134.1\|AXY57124.1\|2205768_2207049_-\|type-I-F-CRISPR-associated-protein-Csy1	gnl\|CDD\|378220	pfam09611, Cas_Csy1, CRISPR-associated protein (Cas_Csy1). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2465 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy1, for CRISPR/Cas Subtype Ypest protein 1.	3.50141e-115
CP032134.1\|AXY57123.1\|2203844_2204858_-\|type-I-F-CRISPR-associated-protein-Csy3	gnl\|CDD\|378222	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2463 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy3, for CRISPR/Cas Subtype Ypest protein 3.	0
CP032134.1\|AXY57125.1\|2210435_2211401_-\|type-I-F-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|132676	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the YPEST subtype of CRISPR/Cas system.	2.54844e-174
CP032134.1\|AXY57122.1\|2203239_2203842_-\|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4	gnl\|CDD\|378224	pfam09618, Cas_Csy4, CRISPR-associated protein (Cas_Csy4). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This protein family, typified by YPO2462 of Yersinia pestis, is a CRISPR-associated (Cas) family strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy4, for CRISPR/Cas Subtype Ypest protein 4.	2.73039e-73
CP032134.1\|AXY57117.1\|2195729_2196476_-\|LPS-export-ABC-transporter-ATP-binding-protein	gnl\|CDD\|275199	TIGR04406, LPS_export_lptB, LPS export ABC transporter ATP-binding protein. Members of this fmaily are LptB, the ATP-binding cassette protein of an ABC transporter involved in lipopolysaccharide export. [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides, Transport and binding proteins, Other].	1.91377e-150
CP032134.1\|AXY58462.1\|2198156_2199134_-\|KpsF/GutQ-family-sugar-phosphate-isomerase	gnl\|CDD\|182814	PRK10892, PRK10892, arabinose-5-phosphate isomerase KdsD.	8.09547e-142
CP032134.1\|AXY57114.1\|2190727_2191918_-\|HlyD-family-type-I-secretion-periplasmic-adaptor-subunit	gnl\|CDD\|130902	TIGR01843, Hemolysin_secretion_protein_D_plasmid, type I secretion membrane fusion protein, HlyD family. Type I secretion is an ABC transport process that exports proteins, without cleavage of any signal sequence, from the cytosol to extracellular medium across both inner and outer membranes. The secretion signal is found in the C-terminus of the transported protein. This model represents the adaptor protein between the ATP-binding cassette (ABC) protein of the inner membrane and the outer membrane protein, and is called the membrane fusion protein. This model selects a subfamily closely related to HlyD; it is defined narrowly and excludes, for example, colicin V secretion protein CvaA and multidrug efflux proteins. [Protein fate, Protein and peptide secretion and trafficking].	4.0049e-98
CP032134.1\|AXY57118.1\|2196475_2197042_-\|lipopolysaccharide-transport-periplasmic-protein-LptA	gnl\|CDD\|274384	TIGR03002, outer_YhbN_LptA, lipopolysaccharide transport periplasmic protein LptA. Members of this protein family include LptA (previously called YhbN). It was shown to be an essential protein in E. coli, implicated in cell envelope integrity, and to play a role in the delivery of LPS to the outer leaflet of the outer membrane. It works with LptB (formerly yhbG), a homolog of ABC transporter ATP-binding proteins, encoded by an adjacent gene. Numerous homologs in other Proteobacteria are found in a conserved location near lipopolysaccharide inner core biosynthesis genes. This family is related to organic solvent tolerance protein (OstA), though distantly. [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides, Transport and binding proteins, Other].	3.85523e-45
CP032134.1\|AXY57128.1\|2213638_2215192_-\|DUF2271-domain-containing-protein	gnl\|CDD\|224394	COG1477, ApbE, Membrane-associated lipoprotein involved in thiamine biosynthesis [Coenzyme metabolism].	4.51638e-50
CP032134.1\|AXY57115.1\|2191914_2194053_-\|type-I-secretion-system-permease/ATPase	gnl\|CDD\|274550	TIGR03375, type_I_sec_LssB, type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis].	0
CP032134.1\|AXY58463.1\|2207061_2210436_-\|type-I-F-CRISPR-associated-helicase-Cas3	gnl\|CDD\|187804	cd09673, Cas3_Cas2_I-F, CRISPR/Cas system-associated protein Cas3/Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas3/Cas2 fusion; This protein includes both DEAH and HD motifs for helicase and N-terminal domain corresponding to Cas2 RNAse; signature gene for Type I and subtype I-F.	0
CP032134.1\|AXY57127.1\|2213016_2213610_-\|hypothetical-protein	gnl\|CDD\|374499	pfam16357, PepSY_TM_like_2, Putative PepSY_TM-like. This is a family of bacterial proteins with three PepSY-like TM regions.	1.43073e-36
CP032134.1\|AXY57130.1\|2216257_2217757_-\|succinate-CoA-transferase	gnl\|CDD\|274588	TIGR03458, Propionyl-CoA:succinate_CoA_transferase, succinate CoA transferase. This family of CoA transferases includes enzymes catalyzing at least two related but distinct activities. The E. coli YgfH protein has been characterized as a propionyl-CoA:succinate CoA transferase where it appears to be involved in a pathway for the decarboxylation of succinate to propionate. The Clostridium kluyveri CAT1 protein has been characterized as a acetyl-CoA:succinate CoA transferase and is believed to be involved in anaerobic succinate degradation. The propionate:succinate transferase activity has been reported in the propionic acid fermentation of propionibacterium species, where it is distinct from the coupled activities of distinct nucleotide-triphosphate dependent succinate and propionate/acetate CoA transferases (as inferred from activity in the absence of NTPs). The family represented by this model includes a member from Propionibacterium acnes KPA171202 which is likely to be responsible for this activity. A closely related clade not included in this family are the Ach1p proteins of fungi which are acetyl-CoA hydrolases. This name has been applied to many of the proteins represented by this model, possibly erroneously.	0
CP032134.1\|AXY57126.1\|2211538_2213011_-\|hypothetical-protein	gnl\|CDD\|99797	cd06200, SiR_like1, Cytochrome p450- like alpha subunits of E. coli sulfite reductase (SiR) multimerize with beta subunits to catalyze the NADPH dependent reduction of sulfite to sulfide. Beta subunits have an Fe4S4 cluster and a siroheme, while the alpha subunits (cysJ gene) are of the cytochrome p450 (CyPor) family having FAD and FMN as prosthetic groups and utilizing NADPH. Cypor (including cyt -450 reductase, nitric oxide synthase, and methionine synthase reductase) are ferredoxin reductase (FNR)-like proteins with an additional N-terminal FMN domain and a connecting sub-domain inserted within the flavin binding portion of the FNR-like domain. The connecting domain orients the N-terminal FMN domain with the C-terminal FNR domain. NADPH cytochrome p450 reductase (CYPOR) serves as an electron donor in several oxygenase systems and is a component of nitric oxide synthases and methionine synthase reductases. CYPOR transfers two electrons from NADPH to the heme of cytochrome p450 via FAD and FMN. Ferredoxin-NADP+ (oxido)reductase is an FAD-containing enzyme that catalyzes the reversible electron transfer between NADP(H) and electron carrier proteins such as ferredoxin and flavodoxin. Isoforms of these flavoproteins (i.e. having a non-covalently bound FAD as a prosthetic group) are present in chloroplasts, mitochondria, and bacteria in which they participate in a wide variety of redox metabolic pathways. The C-terminal domain contains most of the NADP(H) binding residues, and the N-terminal domain interacts non-covalently with the isoalloxazine rings of the flavin molecule, which lies largely in a large gap betweed the two domains. Ferredoxin-NADP+ reductase first accepts one electron from reduced ferredoxin to form a flavin semiquinone intermediate. The enzyme then accepts a second electron to form FADH2 which then transfers two electrons and a proton to NADP+ to form NADPH.	6.49328e-93
CP032134.1\|AXY57119.1\|2197028_2197574_-\|LPS-export-ABC-transporter-periplasmic-protein-LptC	gnl\|CDD\|369103	pfam06835, LptC, Lipopolysaccharide-assembly, LptC-related. This family consists of several related groups of proteins one of which is the LptC family. LptC is involved in lipopolysaccharide-assembly on the outer membrane of Gram-negative organisms. The lipopolysaccharide component of the outer bacterial membrane is transported form its source of origin to the outer membrane by a set of proteins constituting a transport machinery that is made up of LptA, LptB, LptC, LptD, LptE. LptC is located on the inner membrane side of the intermembrane space.	1.67638e-35
CP032134.1\|AXY57129.1\|2215297_2216185_+\|DUF4198-domain-containing-protein	gnl\|CDD\|378467	pfam10670, DUF4198, Domain of unknown function (DUF4198). This family was previously missannotated in Pfam as NikM.	1.27038e-21

>CP032134.1|AXY57121.1|2200572_2201994_+|cysteine--tRNA-ligase
MQPFVLYNSEQRKKVEFVPRKEGQIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWNVRYVRNITDIDDKIIARANENGETITALTDRFIKAMNDDAARLGCAEPDEAPRATDYIDQMQDMIGNLVNKGTAYPSTNGDVYFEVEKFAKYGRLSGRKLEDMQAGASERVDVEVEKKHPFDFVLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLTFPHHENEIAQSEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSPVNFSDVALKEAKNALTRFYHAFKAYEQVYGTQTAETVDETLVERFNTVMRDDFNTSEALAVLFEVIKELNRAVKEENAEQSAIYYSTLRYLSNILGLGQHHVDDFLKSDIGQEALGLTEEQIADLIQQRVDAKKAKDFAQADNIRQSLLDQGVVLEDTRQGTIWRRAD
>CP032134.1|AXY58462.1|2198156_2199134_-|KpsF/GutQ-family-sugar-phosphate-isomerase
MPNQIDFQKVAIETLSIEQHALEVLAHQIDERFTKACEIILQCKGRLVVTGMGKSGHIGRKMAATFASTGTPSFFMHPGEAGHGDLGMLVRGDVLIAISNSGKSDEIMMLMPLIKHLEVPLITISGDDKGPMPQNADVALTLGNIQEACPLGLAPTSSTTATLALGDALAVALLEARGFTADDFAMSHPAGALGKRLLLHVKHLMHTGDELPKVSPDTPMNKVLYEISNKRLGLTTIVDKNDTLQGIFTDGDLRRLIDRQQGFDVNLPVSEVMVKNPSTISQEARAVEALEKMNEKKINQFIVVDDANKVIGVISMHDLIQAGVN
>CP032134.1|AXY57120.1|2197613_2198153_-|HAD-IIIA-family-hydrolase
MASYVLLEQARHIEALVLDVDGILSDGFVTLTNSGDEIKSFDIRDGLGMKLVQQAGVKVIIITGRSSKIVEKRMSDLGVDLVFQGREDKGTALREACAQLGLKPEDCLYMGDDWPDLSAFAVAGMKVTVPNGHVEVRRRADLVTQAYGGRGAVREICDMILKSKGVYEELLEKYIAIPH
>CP032134.1|AXY57119.1|2197028_2197574_-|LPS-export-ABC-transporter-periplasmic-protein-LptC
MDTKIIYVTAIAIAAVSGGYYYYSGKGKKLDVDSARNMTYSAEKINLTQTDENGDLHVRAQVDKLEQDMQQKTSSLKNLNASMYKDGAVDSTFFARTAKGFNDNEKVILSDQVVVVRLMQQGKMEFLTDELTVLPKTRELETESQVTVHSPQAEFVSQGLKASLNDGQYEFFNIRGKYEPK
>CP032134.1|AXY57118.1|2196475_2197042_-|lipopolysaccharide-transport-periplasmic-protein-LptA
MNLNNQQSFARTFLKQIMLTGLTALTASMAFAVPSDRNEPVSLVADRATFNEKTGITTYTGNVIIEQGTMKLQANSIVANLNSNKEISVITATGSPARFQQKTDQAKGLAKGQAQKIVYNAETGILTLVGNALLQQDGASIQGNSLRYSMNKGDIEATGTPNSTGSSAGRVKIVIPPSSKKSFPGARD
>CP032134.1|AXY57117.1|2195729_2196476_-|LPS-export-ABC-transporter-ATP-binding-protein
MEQTQKQVQTLCIRHLAKNYSKRWVVKDVSFKMQSGQIVGLLGPNGAGKTTSFYMVVGLVRMDKGEIHLDDLDLSDLAMHERARKGIGYLPQEASIFRKLTIADNIMSILETRKDLNKQQRQQRLEELLADFKITHIKDSLGMSVSGGERRRAEIARALAADPKFMLLDEPFAGVDPISVGDIKDIIRTLKDRGIGVLITDHNVRETLAICEHAYIVSEGAVIAEGAPQEILENETVRQVYLGEDFTV
>CP032134.1|AXY57116.1|2194049_2195582_-|RND-transporter
MQKKYQIRELRFSVTKGIQCLICIVPLQMLHAETTKGIVDSIKTGASQLLAPKPVKNVNQANIQKLSNFQVDTSRVDDLPVLTGNFPVLDQNSRTVNVQRAPQLSFNESILRALQRSPDVTRSLSTLAAQGANIDVAKAGYYPQISGGVSTADLTRGERGRQLFNITATQMVYDFGKIRSAVDVQEAKLASEQALVLVSLDDVALQTASAIVNTERYKKITQIAQQQIEGISRIAEIANLRAKAGISTQADPVQAQSNLEAAQSNLIVQQNLLNQYKQKLKTLLGYDVSNVGWNIPDRIVQQSALYQDPEFNRIPKMIAAQASVEVAKFQKKQVKLSSYPTLNLKGSLSQAVNGVNPNNNEDDGFYSSIMLEASSSFYQGGAVSSQTRAASYAEEAAKAEVNAVYLDVQDEVRLLREEIENKQRQMSVLVARKQTAIRTKELYQEQYKLGTRSAVDLLTAEQTIHSSASEIENARYDMYAAIIKYIAVTGRSRDVYDLNNISIQGFEIQP
>CP032134.1|AXY57115.1|2191914_2194053_-|type-I-secretion-system-permease/ATPase
MNNTINYQPWLQAVLTIAKHYRIEASEERIRLQLDWNPNQSTDDIMSLMTRQMGMSARKVDFSVDQVNPWRLPIVAEFKDGQVAVVDKLDIDGNVSLQFSGDQGLNQTLTLDELSRNVSSVYIIRPEKSVPDARVDEYIKPYESSWFWDIVLKDWRRYIDIMFASMLANILALATIVFSMNVYDRVIPAQSIPTLWVLFSGVLIAAIFEFSLRVARIYLSDIIGKRADLRISDRVFGHALRIKNSERSKSTGTFISQIRELEGVRELVTSTTITALADLPFFLLFLAIFWVIGGHVFWVVVAVVPLMIIPGILVQKTLARLANEGMRESSIRNAMLVESVQGIEDIKLLRAEAKFQNQWNHMNEVSADIAMRQRKIVGVLTAWTQKLQGLTFAVVVLVGSYAVMKGEMSTGALVACSILSSRMLGPISQLAGVLGRIQQAKVAKMSLDELMKRPVDQPDRAHLIHKPVLNGEYELTSVAFKYSEDDSRYGIAIGKLMIKPGEKIAILGRNGAGKSTLLQLLSGMQFPTQGKVKLDGVDLSLIDPSDVRRDMGLLNQNAYLFYGTVRENLTLGAPLATDEEILKVLSITGALSFVQEKKEGLDHIILEGGIGFSGGQRQALILSRLLLRQPNILLLDEPTAAIDDVSEQQLIQHLKTWLGNRTLIVATHRRAVLELVDRILVVNDGKIVMDGPKEQILNQNQPQQQKDSGASS
>CP032134.1|AXY57114.1|2190727_2191918_-|HlyD-family-type-I-secretion-periplasmic-adaptor-subunit
MSKQKKEISRGMKVTELEPPLPRSSMFIWIIGIGLVALLTWAWLFKLEEVSKGTGKVVPTSKEQVVQSFDGGILTKLNVREGEIVQKGQVLAQLDPTRFESNVGETESLLIASKATSARLRAEVNGTALSFPPEVMADKKLVQEETALYNSRRANLDQSTAGLQQALSLVEQELKMTEPLVAKGAASEVEVLRLKRQANELRNQMNDIRNQYYVKSREELSKANTDVETNQQVVRGKSDTLSRTVFKSPVRGVVKEVDVMTIGGVVPQNGKLMTIVPLDDQLLIEARISPRDIAFIRPGQKALVKITAYDYSIFGGLRGHVTVISPDTIRDEVKQDQFYYRVYIRTDSDKLVNKAGKHFSITPGMVATVDIRTGEKTVLDYLIKPFNKAREALRER
>CP032134.1|AXY57113.1|2190017_2190614_-|hypothetical-protein
MPYTISSLVSFEEDIKKSRFQAFAVPVENEEAVREFLDQYRDISTTHQCWAWKIGHNVRFNDDGEPSGTAGRPILATIEGNELTNVLVLVNRWYGGIKLGTGGLVRAYGGCAGQCLLLAEKIELIEKKKIWFQCLFSEWSIFQYELNSQQIEFSEEYTADGVNVTALVQLHQIEALAVKIQDISRGRAQLKIVEEENV
>CP032134.1|AXY57122.1|2203239_2203842_-|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4
MKFFQEITLIDQAEISPYFIWSKLYTQLHIGLAEIKDANEKVNIGLSFPKYIYEQGDEAKKLKVHLGDKLRIFAETQAELEKLNISKWLERLMDYLHITSIREVPEAKISGYATYSRKQVKTNAERLARHRAKRGDIGFDEALARYSNVVTTTDLPYIQMKSLTSDKSFKLFIEKKSATKSETQVFSTYGLSSVSTVPEF
>CP032134.1|AXY57123.1|2203844_2204858_-|type-I-F-CRISPR-associated-protein-Csy3
MAKNEKAVASVLAFEKKLVPSDGYFYGTTWANRTEQAALKLIEKSVRGTISNRLKPAVAGDPLKLNAEVEKANLQKVDACALGENQDTLKVAFTLKVLGGIEQPSACNNETFFNSYQTVAKNYIAQYGFSELSKRYASNIANARFLWRNRVGAEKVEVVVTVNEQEAVTFNAFDYPLHDFDNVDAKVQQLADQIAQALKGEVPYLLIKIEAYALVGKAQEVYPSEELVLDKGKGDKSKILYQVNDVAAMHSQKVGNALRTIDTWYPEFEDKQTAIAIEPYGAVTNLGKAYRTPKAKQDFFSLFDKYALGESLENTEQEHYVMAVLVRGGVFGQSSKD
>CP032134.1|AXY57124.1|2205768_2207049_-|type-I-F-CRISPR-associated-protein-Csy1
MTESIQTFLNERKELWLKDRVKKAENDTEVAELQQQADDKFSLQEWLPDAAKRVSQLSMMVSHPSKFSHPSAKTSSVIAQVKSAQDGYLRSGNVHYPLDVFGNAAAMDVYKFLSLSLTEDSTVLMGFEKDDQDLKSLIEKSSLDFASLKQAFLVIKNDDASSKTDHLVKQVYFPLENNEYHLLSILTPSGLITRLKQSIDQLRFSDATKEAKEKRKKNEHDAEGYADIFDLTVTAYGGTQPQNVSVLNSQNAGRAYLLSSCPPSFEERKIRLPTRDFFEQCLYSKGYKQSFKELQVLIRKDLDGETGKRKNTYLIRKDIDKTLRKIIEQILFKAFCIRKYKKEWSINDSYKTLPLYQRIWLDDFYEEQRKDDDEWFEEISLRISKWIINVYEDKEIIENSYMLGSGEILAVKEIVKELLDEDKEFF
>CP032134.1|AXY58463.1|2207061_2210436_-|type-I-F-CRISPR-associated-helicase-Cas3
MIVTFISQCEKKAIPRTRRVLDAFADRIGDNTWQTVITEDGLIAVKKLLRKTVTKSTAVSCHWIRGRRRSELLWVVGNRNKFNSEGIVPVNRTKKKLDQNKWENDWHYLPLIKSLVAISALLHDWGKATVLFQSKLTDKNGTFKGDPLRHEWISCLLLNALVHSSDNPKSDDAWLNLLLNKSWSEQQLKDVVAQNLDKTKALDNLPPLAQFVAWLIVSHHRLPNLKDDDELKSFSAEPAENITDLFEFIEVDWGYQNKFDEQEYQQRLLQCFQFEQGLLSQSVEWTKQIKKWSARLLQEKDNIEQVLSDGSWRVVLHHARLCLMMGDHYYSSCEADKTWKTDLSLIANTDYETKQPKQFLDEHLVRVSDNAMRVAQSLSRLADEMEPAYDIQKLKKKSPQGFEWQDNAVKEIKQFKQKHEDAPEQGWFIVNMASTGKGKTIANAKIMQALSKDGQSLRYVLALGLRTLTLQTGDSYRTDIGLSNDELAVLIGSKAIQELHHKQQNTAEQIAENYDEIGSESLEKLLDNELDYGDMPQADFMNVLFPANQAERNKAFLYKPVLACTIDHIMSATETKRGGKYILPSLRLSSSDLVIDEVDDFNGQDLIAIARLIHLTAMLGRKVMISSATIPPALAEGFFNVYQQGWKLYCAFKKLKQTQVMGMWVDEFKAQTQTVDLTESDNIIKHYKQGHDAFVAIRAKSLAEQIIKHKAYIIECDDLVAQKEQKQLDESIQQQYFDRIRQNIEQLHQHHHTIDSQTGKKVSFGVVRVANIPPCVALTQFLLNAEWSDNIAPRSMAYHSRQVLLLRSEQERHLDTVLKRKEKQGEQPASFSNDVIRQHLDCTDAEHVIFILVATPVEEVGRDHDFDWAIVEPSSYRSIIQLAGRVLRHRRLEQDIQEPNIALLQYNLKGLRGAKVAFEKPGFEVNNNQFKLKTKNLSELIDLDEHAEINAIPRIQAQTPLKATEKLADLEHAVLVHSLTNYKQVGAKPLNAWLTQYWFLTALPQRFTPFRQSTPNIQFFAVYKDQKLVFSEKDDLGRYIDRNGFYKIKPYELNELEQQRLWLNRNYYDILCRMAVEKISENQHIDDEIEELSRRYGEIMLPQYDEDKTLLYSDQFGLVVQYSK
>CP032134.1|AXY57125.1|2210435_2211401_-|type-I-F-CRISPR-associated-endonuclease-Cas1
MEQLNPSDLKAILHSKRANIYYLEHARVMQKDGRVLYLTEAKNENQYWNIPIANTTVVMLGTGTSITQAAMRMLASAGVLVGFCGGGGTPLFMGCEIEWMTPQSEYRPTEYMQGWMQFWFDDQKRLEVAKQFQLSRIEFIRKIWDKDRDLKAEGFYLDDLDIQNALNGFEKKIPNLNKVGDLLLAEAATTKQLYKIAATRTGSKDFSRNPEQGDLANDFLNHGNYLAYGLAATTLWVLGIPHGFAVMHGKTRRGALVFDVADLIKDAVVLPYAFICAKERMSEQEFRSQLLQKFIEHKCLDWMFDQVKLQACRTHDVDGDA
>CP032134.1|AXY57126.1|2211538_2213011_-|hypothetical-protein
MTQAVVIVLVCLAILLCIFLIIIFLLIFQNKRKAVQTEQDSAEYLIVYASQSGNTENFAQQTAQQLQSVGEQVQCMDIQFLTESHLHTAHKVLWMVSTYGEGDAPDTAQNFVQTFMSQKYDLAHLSYAVLASGDSRYPDFCRFGQRLNSWLQDQKAQPLFDMICVDQQAQTTLNVWTHCLEQQTRHELGNLNKEKEWTSVQLQKRELLNAGSQGNPLYHLEFSFEELQWQAGDILELRCANTVTEIEKFLNRHEQPASIDSVHKLQFKNLRQHPEQYRNESFLNWTERFENLSSRDYSIASIPEQKKIELVVRQEITETGLGLGSGWLTQGIEQGQFADVRIRINPSFQAESDQKPCILIGNGSGIAGLMAHLHQQQRSLSFGNWLIFGERNKLTDSLFQTQLQQWQSNGVLAEQDLVFSRDGNSLKYVQDVLNTRSELLKQMVEQGACIYVCGSIKGMGQAVDDTLTSILGADLLNDLKQQRRYKRDVY
>CP032134.1|AXY57127.1|2213016_2213610_-|hypothetical-protein
MYQRRDFYRHARYVHGWLSAFAFIVLIFFSLTGLFLNHPEWFEPAKEENTQTIQIPETALAQLKAEENPSSELLKIVRQKATLTGRYLSSEVMDNEVMIRLESPAGSTDIWAMMDTGEVEITTKPASTVSLINDLHRGKNSGTAWSWLIDLSAVLIIALSLAGYILFISIKTRLVTHLTLTSASLAVLMLLVWLAIG
>CP032134.1|AXY57128.1|2213638_2215192_-|DUF2271-domain-containing-protein
MSSNPPKFYPIRSAFRLTPLMMALTLIAPFSLNAASVNAPESTELQKQLTHHFHQDHILGTSLDVVVNGVSRQEAKQAMDAIRAEIAQLDQKLSVWREDSEISALNSSRGKQVSPELFEVIAACENWRDKTCGAFDARLGQLIAVWEKTQGVVEPDAATRDQIVQHLKNNTLQLNAENRTVNMQEGLKLAPDAYAKGYIIDRALVAARQKVPALQGLLVDIGGDIRVWGNAPQKSGWSIGVQDAFNHHDLAVPTQVLSLNDQAVAFSGKGYRTLAGQSHLMNPQTGLPLQQVEQCVVVGTCAADADALATALAAMTPAEGLELIESLIGYEAQLTMSNGQTHQSSGWNSLLQRTDQAEMLTVASAASAKWPAGYQAIVELVIPKLDVEKYRAPYVSVWVTDSSKKLVRTLAVWGKDEKWINSNYVWWRRYGRQMAQLDAVAKPSRQPGQYKLAWDGKDDTGKAVAAGHYQIHVETSREHGDHSYQTIDLDVKAKGASQVLPAQTEIGTVKMNFQKVN
>CP032134.1|AXY57129.1|2215297_2216185_+|DUF4198-domain-containing-protein
MNNWLKIALLTSLPVLSHAHTMSPYLLPEVFDTASAQNISFQSAITIEKFFVPGNNFKTTYIVTEPNGAQKAVSPAASLKRFSIAEFDLPAEGTYRIRTQDAVGNSGKYALVDGRWLRVRPARPPMPQNTAAAKSAETAPKAPATSQPPRVIAADQVPANAQTMEVKNTFIAESFVTKGKPSPVPAPTGKGLEFKLLTHPNELYAGESLKIQALMNGKAISGLEVDVFKGASSYEPNAKREQPHVKTNAKGETEIKFEQSGIYLITAAYPEASADNTKKPQPEVFTYGLTVEVSE
>CP032134.1|AXY57130.1|2216257_2217757_-|succinate-CoA-transferase
MINGLERIRCAALHEKVMSVEKAIELIQDGDVVGMSGFGGAGEAKTVPLALVDYAQNHPMKITLATGASLGNRIDGRLSDAHALERRYPYQADPTLRKAINNGEVMYIDQHLSELADNIRHKNLPKINVAVIAATAITEDGQIIPTGSCGNTANFVEMADHVIVEIDNTISPVLEGVHDIYVPKARPNREPIPLTQAGDRIGTIGIQVDSSKISAIVINDLPDTSFKMDEADDETLAIAKHLVHFFENEVAVGRLPENLGPLQSGVGSIANAVFAGFEHSDFHDLEMYSEVLQDCTFQLIDSGKMKFASGSSMTLSDDCAKRVMNNFEQYKDKIVMRPQELSNNPEIIRRLGIIAINTALEFDIYGNVNSTHVTGTKMMNGIGGSGDFTRHAHLAIFVTKSIAKGGAISSVVPMVSHCDHAEHDIDVLVTEQGLADLRGLAPRERALKIIEKCAHPSYKADLLSYFNRACALGGQTPHVLREALSWHAQFEEMGSMKSA

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
CP032134_2	2.12\|2202989\|32\|CP032134\|CRT,PILER-CR,CRISPRCasFinder	2202989-2203020	32	CP032134.1	2381205-2381236	1	0.969
CP032134_2	2.4\|2202509\|32\|CP032134\|CRT,PILER-CR,CRISPRCasFinder	2202509-2202540	32	CP032134.1	2384101-2384132	2	0.938
CP032134_2	2.13\|2203049\|32\|CP032134\|CRT,PILER-CR,CRISPRCasFinder	2203049-2203080	32	CP032134.1	2376435-2376466	2	0.938

1. spacer 2.12|2202989|32|CP032134|CRT,PILER-CR,CRISPRCasFinder matches to position: 2381205-2381236, mismatch: 1, identity: 0.969

atccaattatctgcagggttataaaaatcaca	CRISPR spacer
atccaattatctgaagggttataaaaatcaca	Protospacer
************* ******************

2. spacer 2.4|2202509|32|CP032134|CRT,PILER-CR,CRISPRCasFinder matches to position: 2384101-2384132, mismatch: 2, identity: 0.938

ttaatattgaacggcacctgacgcatacgcgg	CRISPR spacer
ttgatattgaacggcacctggcgcatacgcgg	Protospacer
**.*****************.***********

3. spacer 2.13|2203049|32|CP032134|CRT,PILER-CR,CRISPRCasFinder matches to position: 2376435-2376466, mismatch: 2, identity: 0.938

ctttcatacgttcctgctcgaaactggtttca	CRISPR spacer
cttttaaacgttcctgctcgaaactggtttca	Protospacer
****.* *************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP032134_1	1.5\|2038296\|31\|CP032134\|PILER-CR	2038296-2038326	31	MH319765	Marine virus AG-345-P14 Ga0172274_12 genomic sequence	51481-51511	7	0.774
CP032134_2	2.3\|2202449\|32\|CP032134\|CRT,PILER-CR,CRISPRCasFinder	2202449-2202480	32	MN276049	Acinetobacter phage BS46, complete genome	10649-10680	7	0.781
CP032134_2	2.5\|2202569\|32\|CP032134\|CRT,PILER-CR,CRISPRCasFinder	2202569-2202600	32	NZ_CP013715	Staphylococcus equorum strain C2014 plasmid pC2014-1, complete sequence	36152-36183	7	0.781
CP032134_2	2.6\|2202629\|32\|CP032134\|CRT,PILER-CR,CRISPRCasFinder	2202629-2202660	32	NZ_KT290268	Enterococcus faecalis strain CK135 plasmid pPD1, complete sequence	1171-1202	7	0.781
CP032134_2	2.6\|2202629\|32\|CP032134\|CRT,PILER-CR,CRISPRCasFinder	2202629-2202660	32	NC_025151	Leptospira interrogans serovar Lai str. 56601 plasmid Laicp, complete sequence	22334-22365	7	0.781
CP032134_2	2.6\|2202629\|32\|CP032134\|CRT,PILER-CR,CRISPRCasFinder	2202629-2202660	32	MF189171	Arthrobacter phage Correa, complete genome	27264-27295	8	0.75
CP032134_2	2.6\|2202629\|32\|CP032134\|CRT,PILER-CR,CRISPRCasFinder	2202629-2202660	32	MK967398	Arthrobacter phage JEGGS, complete genome	28123-28154	8	0.75
CP032134_2	2.6\|2202629\|32\|CP032134\|CRT,PILER-CR,CRISPRCasFinder	2202629-2202660	32	MF189173	Arthrobacter phage Heisenberger, complete genome	28069-28100	8	0.75
CP032134_2	2.6\|2202629\|32\|CP032134\|CRT,PILER-CR,CRISPRCasFinder	2202629-2202660	32	MF324906	Arthrobacter phage Cheesy, complete genome	28076-28107	8	0.75
CP032134_2	2.6\|2202629\|32\|CP032134\|CRT,PILER-CR,CRISPRCasFinder	2202629-2202660	32	MF189175	Arthrobacter phage Tribby, complete genome	28097-28128	8	0.75
CP032134_2	2.6\|2202629\|32\|CP032134\|CRT,PILER-CR,CRISPRCasFinder	2202629-2202660	32	KU160642	Arthrobacter phage Circum, complete genome	28736-28767	8	0.75
CP032134_2	2.10\|2202869\|32\|CP032134\|CRT,PILER-CR,CRISPRCasFinder	2202869-2202900	32	MH697582	Mycobacterium phage Ejimix, complete genome	48809-48840	8	0.75
CP032134_2	2.10\|2202869\|32\|CP032134\|CRT,PILER-CR,CRISPRCasFinder	2202869-2202900	32	MK967402	Mycobacterium phage NihilNomen, complete genome	48110-48141	8	0.75
CP032134_2	2.10\|2202869\|32\|CP032134\|CRT,PILER-CR,CRISPRCasFinder	2202869-2202900	32	MN586029	Mycobacterium phage Hannaconda, complete genome	43215-43246	8	0.75
CP032134_2	2.10\|2202869\|32\|CP032134\|CRT,PILER-CR,CRISPRCasFinder	2202869-2202900	32	MH697583	Mycobacterium phage EricMillard, complete genome	48310-48341	8	0.75
CP032134_2	2.10\|2202869\|32\|CP032134\|CRT,PILER-CR,CRISPRCasFinder	2202869-2202900	32	MH727551	Mycobacterium phage Kalah2, complete genome	47566-47597	8	0.75
CP032134_2	2.10\|2202869\|32\|CP032134\|CRT,PILER-CR,CRISPRCasFinder	2202869-2202900	32	MF919504	Mycobacterium phage DmpstrDiver, complete genome	47371-47402	8	0.75
CP032134_2	2.10\|2202869\|32\|CP032134\|CRT,PILER-CR,CRISPRCasFinder	2202869-2202900	32	MH399772	Mycobacterium phage Constella, complete genome	42961-42992	8	0.75
CP032134_2	2.10\|2202869\|32\|CP032134\|CRT,PILER-CR,CRISPRCasFinder	2202869-2202900	32	MH077579	Mycobacterium phage Halley, complete genome	48023-48054	8	0.75
CP032134_2	2.10\|2202869\|32\|CP032134\|CRT,PILER-CR,CRISPRCasFinder	2202869-2202900	32	JF937090	Mycobacterium virus BAKA, complete genome	48125-48156	8	0.75
CP032134_2	2.10\|2202869\|32\|CP032134\|CRT,PILER-CR,CRISPRCasFinder	2202869-2202900	32	MH669017	Mycobacterium phage Zelink, complete genome	48499-48530	8	0.75
CP032134_2	2.10\|2202869\|32\|CP032134\|CRT,PILER-CR,CRISPRCasFinder	2202869-2202900	32	MK524521	Mycobacterium phage Schatzie, complete genome	46900-46931	8	0.75
CP032134_2	2.10\|2202869\|32\|CP032134\|CRT,PILER-CR,CRISPRCasFinder	2202869-2202900	32	MF133445	Mycobacterium phage Lucky2013, complete genome	43762-43793	8	0.75
CP032134_2	2.10\|2202869\|32\|CP032134\|CRT,PILER-CR,CRISPRCasFinder	2202869-2202900	32	MK524516	Mycobacterium phage Bobby, complete genome	47384-47415	8	0.75
CP032134_2	2.10\|2202869\|32\|CP032134\|CRT,PILER-CR,CRISPRCasFinder	2202869-2202900	32	MF072690	Mycobacterium phage Porcelain, complete genome	43437-43468	8	0.75
CP032134_2	2.10\|2202869\|32\|CP032134\|CRT,PILER-CR,CRISPRCasFinder	2202869-2202900	32	MN062701	Mycobacterium phage Dallas, complete genome	46944-46975	8	0.75
CP032134_2	2.10\|2202869\|32\|CP032134\|CRT,PILER-CR,CRISPRCasFinder	2202869-2202900	32	NC_041844	Mycobacterium phage Optimus, complete genome	49025-49056	8	0.75
CP032134_2	2.10\|2202869\|32\|CP032134\|CRT,PILER-CR,CRISPRCasFinder	2202869-2202900	32	MK524527	Mycobacterium phage ThreeRngTarjay, complete genome	48186-48217	8	0.75
CP032134_2	2.10\|2202869\|32\|CP032134\|CRT,PILER-CR,CRISPRCasFinder	2202869-2202900	32	MK279849	Mycobacterium phage Duke13, complete genome	47891-47922	8	0.75
CP032134_2	2.10\|2202869\|32\|CP032134\|CRT,PILER-CR,CRISPRCasFinder	2202869-2202900	32	MN183286	Mycobacteriophage Yeet, complete genome	47011-47042	8	0.75
CP032134_2	2.10\|2202869\|32\|CP032134\|CRT,PILER-CR,CRISPRCasFinder	2202869-2202900	32	MK524529	Mycobacterium phage Phoebus, complete genome	48311-48342	8	0.75
CP032134_2	2.10\|2202869\|32\|CP032134\|CRT,PILER-CR,CRISPRCasFinder	2202869-2202900	32	KM400683	Mycobacterium phage Ariel, complete genome	43222-43253	8	0.75
CP032134_2	2.10\|2202869\|32\|CP032134\|CRT,PILER-CR,CRISPRCasFinder	2202869-2202900	32	JN201525	Mycobacterium phage Thibault, complete genome	44615-44646	8	0.75
CP032134_2	2.10\|2202869\|32\|CP032134\|CRT,PILER-CR,CRISPRCasFinder	2202869-2202900	32	MF919512	Mycobacterium phage Klein, complete genome	47589-47620	8	0.75
CP032134_2	2.10\|2202869\|32\|CP032134\|CRT,PILER-CR,CRISPRCasFinder	2202869-2202900	32	NC_026584	Mycobacterium phage Minerva, complete genome	49439-49470	8	0.75
CP032134_2	2.10\|2202869\|32\|CP032134\|CRT,PILER-CR,CRISPRCasFinder	2202869-2202900	32	MF919534	Mycobacterium phage Superphikiman, complete genome	43628-43659	8	0.75
CP032134_2	2.10\|2202869\|32\|CP032134\|CRT,PILER-CR,CRISPRCasFinder	2202869-2202900	32	NC_023690	Mycobacterium phage Courthouse, complete genome	43626-43657	8	0.75
CP032134_2	2.10\|2202869\|32\|CP032134\|CRT,PILER-CR,CRISPRCasFinder	2202869-2202900	32	KF114875	Mycobacterium phage Redno2, complete genome	44906-44937	8	0.75
CP032134_2	2.10\|2202869\|32\|CP032134\|CRT,PILER-CR,CRISPRCasFinder	2202869-2202900	32	NC_022067	Mycobacterium phage Wanda, complete genome	47898-47929	8	0.75
CP032134_2	2.10\|2202869\|32\|CP032134\|CRT,PILER-CR,CRISPRCasFinder	2202869-2202900	32	MK524504	Mycobacterium phage Hughesyang, complete genome	47952-47983	8	0.75
CP032134_2	2.10\|2202869\|32\|CP032134\|CRT,PILER-CR,CRISPRCasFinder	2202869-2202900	32	MK967379	Mycobacterium phage HokkenD, complete genome	46292-46323	8	0.75
CP032134_2	2.10\|2202869\|32\|CP032134\|CRT,PILER-CR,CRISPRCasFinder	2202869-2202900	32	NC_028953	Mycobacterium phage MiaZeal, complete genome	43437-43468	8	0.75
CP032134_2	2.10\|2202869\|32\|CP032134\|CRT,PILER-CR,CRISPRCasFinder	2202869-2202900	32	MF668284	Mycobacterium phage Squint, complete genome	43556-43587	8	0.75
CP032134_2	2.13\|2203049\|32\|CP032134\|CRT,PILER-CR,CRISPRCasFinder	2203049-2203080	32	MG592553	Vibrio phage 1.187.O._10N.286.49.F1, partial genome	43941-43972	8	0.75
CP032134_2	2.5\|2202569\|32\|CP032134\|CRT,PILER-CR,CRISPRCasFinder	2202569-2202600	32	NZ_CP011933	Leptospira interrogans serovar Manilae strain UP-MMC-NIID LP plasmid pLIMLP1, complete sequence	31967-31998	9	0.719
CP032134_2	2.6\|2202629\|32\|CP032134\|CRT,PILER-CR,CRISPRCasFinder	2202629-2202660	32	MH450120	Arthrobacter phage KeaneyLin, complete genome	28214-28245	9	0.719
CP032134_2	2.5\|2202569\|32\|CP032134\|CRT,PILER-CR,CRISPRCasFinder	2202569-2202600	32	AP014315	Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S31-C66, * SEQUENCING IN PROGRESS *	10006-10037	10	0.688
CP032134_2	2.13\|2203049\|32\|CP032134\|CRT,PILER-CR,CRISPRCasFinder	2203049-2203080	32	NC_007974	Cupriavidus metallidurans CH34 megaplasmid, complete sequence	176955-176986	10	0.688
CP032134_2	2.13\|2203049\|32\|CP032134\|CRT,PILER-CR,CRISPRCasFinder	2203049-2203080	32	NZ_CP046333	Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed3	870265-870296	10	0.688

1. spacer 1.5|2038296|31|CP032134|PILER-CR matches to MH319765 (Marine virus AG-345-P14 Ga0172274_12 genomic sequence) position: , mismatch: 7, identity: 0.774

tttcgggaacgcaactcattgtctgatagta	CRISPR spacer
gtaaggatacgcaattcattctctgatagta	Protospacer
 *  **. ******.***** **********

2. spacer 2.3|2202449|32|CP032134|CRT,PILER-CR,CRISPRCasFinder matches to MN276049 (Acinetobacter phage BS46, complete genome) position: , mismatch: 7, identity: 0.781

cgtgaagatgtattcagattacgaagatcgaa	CRISPR spacer
cacgagaaggtattcagagtacgaagattgaa	Protospacer
*..**..* ********* *********.***

3. spacer 2.5|2202569|32|CP032134|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP013715 (Staphylococcus equorum strain C2014 plasmid pC2014-1, complete sequence) position: , mismatch: 7, identity: 0.781

aagaaaaattcaaaggatgtattggttttggt	CRISPR spacer
aagaaaaattcaaagaatatattgataaagat	Protospacer
***************.**.*****.*   *.*

4. spacer 2.6|2202629|32|CP032134|CRT,PILER-CR,CRISPRCasFinder matches to NZ_KT290268 (Enterococcus faecalis strain CK135 plasmid pPD1, complete sequence) position: , mismatch: 7, identity: 0.781

ttgaaac---tgaatttacatttacttatgaaata	CRISPR spacer
---aaatacatgaatttatatttacttataaaatt	Protospacer
   ***.   ********.**********.****

5. spacer 2.6|2202629|32|CP032134|CRT,PILER-CR,CRISPRCasFinder matches to NC_025151 (Leptospira interrogans serovar Lai str. 56601 plasmid Laicp, complete sequence) position: , mismatch: 7, identity: 0.781

---ttgaaactgaatttacatttacttatgaaata	CRISPR spacer
acgttga---tgaatttacgcttacttatgaaaat	Protospacer
   ****   *********..************

6. spacer 2.6|2202629|32|CP032134|CRT,PILER-CR,CRISPRCasFinder matches to MF189171 (Arthrobacter phage Correa, complete genome) position: , mismatch: 8, identity: 0.75

ttgaaactgaatttacatttacttatgaaata	CRISPR spacer
tatcacatgaatttacatattcttatgaaatc	Protospacer
*   *  *********** * **********

7. spacer 2.6|2202629|32|CP032134|CRT,PILER-CR,CRISPRCasFinder matches to MK967398 (Arthrobacter phage JEGGS, complete genome) position: , mismatch: 8, identity: 0.75

ttgaaactgaatttacatttacttatgaaata	CRISPR spacer
tatcacatgaatttacatattcttatgaaatc	Protospacer
*   *  *********** * **********

8. spacer 2.6|2202629|32|CP032134|CRT,PILER-CR,CRISPRCasFinder matches to MF189173 (Arthrobacter phage Heisenberger, complete genome) position: , mismatch: 8, identity: 0.75

ttgaaactgaatttacatttacttatgaaata	CRISPR spacer
tatcacatgaatttacatattcttatgaaatc	Protospacer
*   *  *********** * **********

9. spacer 2.6|2202629|32|CP032134|CRT,PILER-CR,CRISPRCasFinder matches to MF324906 (Arthrobacter phage Cheesy, complete genome) position: , mismatch: 8, identity: 0.75

ttgaaactgaatttacatttacttatgaaata	CRISPR spacer
tatcacatgaatttacatattcttatgaaatc	Protospacer
*   *  *********** * **********

10. spacer 2.6|2202629|32|CP032134|CRT,PILER-CR,CRISPRCasFinder matches to MF189175 (Arthrobacter phage Tribby, complete genome) position: , mismatch: 8, identity: 0.75

ttgaaactgaatttacatttacttatgaaata	CRISPR spacer
tatcacatgaatttacatattcttatgaaatc	Protospacer
*   *  *********** * **********

11. spacer 2.6|2202629|32|CP032134|CRT,PILER-CR,CRISPRCasFinder matches to KU160642 (Arthrobacter phage Circum, complete genome) position: , mismatch: 8, identity: 0.75

ttgaaactgaatttacatttacttatgaaata	CRISPR spacer
tatcacatgaatttacatattcttatgaaatc	Protospacer
*   *  *********** * **********

12. spacer 2.10|2202869|32|CP032134|CRT,PILER-CR,CRISPRCasFinder matches to MH697582 (Mycobacterium phage Ejimix, complete genome) position: , mismatch: 8, identity: 0.75

ttatatacgtgcctgttcatatttctttaccg	CRISPR spacer
ttgaatacgtgcctgttcacagttcttgctcc	Protospacer
**. ***************.* *****  .*

13. spacer 2.10|2202869|32|CP032134|CRT,PILER-CR,CRISPRCasFinder matches to MK967402 (Mycobacterium phage NihilNomen, complete genome) position: , mismatch: 8, identity: 0.75

ttatatacgtgcctgttcatatttctttaccg	CRISPR spacer
ttgaatacgtgcctgttcacagttcttgctcc	Protospacer
**. ***************.* *****  .*

14. spacer 2.10|2202869|32|CP032134|CRT,PILER-CR,CRISPRCasFinder matches to MN586029 (Mycobacterium phage Hannaconda, complete genome) position: , mismatch: 8, identity: 0.75

ttatatacgtgcctgttcatatttctttaccg	CRISPR spacer
ttgaatacgtgcctgttcacagttcttgctcc	Protospacer
**. ***************.* *****  .*

15. spacer 2.10|2202869|32|CP032134|CRT,PILER-CR,CRISPRCasFinder matches to MH697583 (Mycobacterium phage EricMillard, complete genome) position: , mismatch: 8, identity: 0.75

ttatatacgtgcctgttcatatttctttaccg	CRISPR spacer
ttgaatacgtgcctgttcacagttcttgctcc	Protospacer
**. ***************.* *****  .*

16. spacer 2.10|2202869|32|CP032134|CRT,PILER-CR,CRISPRCasFinder matches to MH727551 (Mycobacterium phage Kalah2, complete genome) position: , mismatch: 8, identity: 0.75

ttatatacgtgcctgttcatatttctttaccg	CRISPR spacer
ttgaatacgtgcctgttcacagttcttgctcc	Protospacer
**. ***************.* *****  .*

17. spacer 2.10|2202869|32|CP032134|CRT,PILER-CR,CRISPRCasFinder matches to MF919504 (Mycobacterium phage DmpstrDiver, complete genome) position: , mismatch: 8, identity: 0.75

ttatatacgtgcctgttcatatttctttaccg	CRISPR spacer
ttgaatacgtgcctgttcacagttcttgctcc	Protospacer
**. ***************.* *****  .*

18. spacer 2.10|2202869|32|CP032134|CRT,PILER-CR,CRISPRCasFinder matches to MH399772 (Mycobacterium phage Constella, complete genome) position: , mismatch: 8, identity: 0.75

ttatatacgtgcctgttcatatttctttaccg	CRISPR spacer
ttgaatacgtgcctgttcacagttcttgctcc	Protospacer
**. ***************.* *****  .*

19. spacer 2.10|2202869|32|CP032134|CRT,PILER-CR,CRISPRCasFinder matches to MH077579 (Mycobacterium phage Halley, complete genome) position: , mismatch: 8, identity: 0.75

ttatatacgtgcctgttcatatttctttaccg	CRISPR spacer
ttgaatacgtgcctgttcacagttcttgctcc	Protospacer
**. ***************.* *****  .*

20. spacer 2.10|2202869|32|CP032134|CRT,PILER-CR,CRISPRCasFinder matches to JF937090 (Mycobacterium virus BAKA, complete genome) position: , mismatch: 8, identity: 0.75

ttatatacgtgcctgttcatatttctttaccg	CRISPR spacer
ttgaatacgtgcctgttcacagttcttgctcc	Protospacer
**. ***************.* *****  .*

21. spacer 2.10|2202869|32|CP032134|CRT,PILER-CR,CRISPRCasFinder matches to MH669017 (Mycobacterium phage Zelink, complete genome) position: , mismatch: 8, identity: 0.75

ttatatacgtgcctgttcatatttctttaccg	CRISPR spacer
ttgaatacgtgcctgttcacagttcttgctcc	Protospacer
**. ***************.* *****  .*

22. spacer 2.10|2202869|32|CP032134|CRT,PILER-CR,CRISPRCasFinder matches to MK524521 (Mycobacterium phage Schatzie, complete genome) position: , mismatch: 8, identity: 0.75

ttatatacgtgcctgttcatatttctttaccg	CRISPR spacer
ttgaatacgtgcctgttcacagttcttgctcc	Protospacer
**. ***************.* *****  .*

23. spacer 2.10|2202869|32|CP032134|CRT,PILER-CR,CRISPRCasFinder matches to MF133445 (Mycobacterium phage Lucky2013, complete genome) position: , mismatch: 8, identity: 0.75

ttatatacgtgcctgttcatatttctttaccg	CRISPR spacer
ttgaatacgtgcctgttcacagttcttgctcc	Protospacer
**. ***************.* *****  .*

24. spacer 2.10|2202869|32|CP032134|CRT,PILER-CR,CRISPRCasFinder matches to MK524516 (Mycobacterium phage Bobby, complete genome) position: , mismatch: 8, identity: 0.75

ttatatacgtgcctgttcatatttctttaccg	CRISPR spacer
ttgaatacgtgcctgttcacagttcttgctcc	Protospacer
**. ***************.* *****  .*

25. spacer 2.10|2202869|32|CP032134|CRT,PILER-CR,CRISPRCasFinder matches to MF072690 (Mycobacterium phage Porcelain, complete genome) position: , mismatch: 8, identity: 0.75

ttatatacgtgcctgttcatatttctttaccg	CRISPR spacer
ttgaatacgtgcctgttcacagttcttgctcc	Protospacer
**. ***************.* *****  .*

26. spacer 2.10|2202869|32|CP032134|CRT,PILER-CR,CRISPRCasFinder matches to MN062701 (Mycobacterium phage Dallas, complete genome) position: , mismatch: 8, identity: 0.75

ttatatacgtgcctgttcatatttctttaccg	CRISPR spacer
ttgaatacgtgcctgttcacagttcttgctcc	Protospacer
**. ***************.* *****  .*

27. spacer 2.10|2202869|32|CP032134|CRT,PILER-CR,CRISPRCasFinder matches to NC_041844 (Mycobacterium phage Optimus, complete genome) position: , mismatch: 8, identity: 0.75

ttatatacgtgcctgttcatatttctttaccg	CRISPR spacer
ttgaatacgtgcctgttcacagttcttgctcc	Protospacer
**. ***************.* *****  .*

28. spacer 2.10|2202869|32|CP032134|CRT,PILER-CR,CRISPRCasFinder matches to MK524527 (Mycobacterium phage ThreeRngTarjay, complete genome) position: , mismatch: 8, identity: 0.75

ttatatacgtgcctgttcatatttctttaccg	CRISPR spacer
ttgaatacgtgcctgttcacagttcttgctcc	Protospacer
**. ***************.* *****  .*

29. spacer 2.10|2202869|32|CP032134|CRT,PILER-CR,CRISPRCasFinder matches to MK279849 (Mycobacterium phage Duke13, complete genome) position: , mismatch: 8, identity: 0.75

ttatatacgtgcctgttcatatttctttaccg	CRISPR spacer
ttgaatacgtgcctgttcacagttcttgctcc	Protospacer
**. ***************.* *****  .*

30. spacer 2.10|2202869|32|CP032134|CRT,PILER-CR,CRISPRCasFinder matches to MN183286 (Mycobacteriophage Yeet, complete genome) position: , mismatch: 8, identity: 0.75

ttatatacgtgcctgttcatatttctttaccg	CRISPR spacer
ttgaatacgtgcctgttcacagttcttgctcc	Protospacer
**. ***************.* *****  .*

31. spacer 2.10|2202869|32|CP032134|CRT,PILER-CR,CRISPRCasFinder matches to MK524529 (Mycobacterium phage Phoebus, complete genome) position: , mismatch: 8, identity: 0.75

ttatatacgtgcctgttcatatttctttaccg	CRISPR spacer
ttgaatacgtgcctgttcacagttcttgctcc	Protospacer
**. ***************.* *****  .*

32. spacer 2.10|2202869|32|CP032134|CRT,PILER-CR,CRISPRCasFinder matches to KM400683 (Mycobacterium phage Ariel, complete genome) position: , mismatch: 8, identity: 0.75

ttatatacgtgcctgttcatatttctttaccg	CRISPR spacer
ttgaatacgtgcctgttcacagttcttgctcc	Protospacer
**. ***************.* *****  .*

33. spacer 2.10|2202869|32|CP032134|CRT,PILER-CR,CRISPRCasFinder matches to JN201525 (Mycobacterium phage Thibault, complete genome) position: , mismatch: 8, identity: 0.75

ttatatacgtgcctgttcatatttctttaccg	CRISPR spacer
ttgaatacgtgcctgttcacagttcttgctcc	Protospacer
**. ***************.* *****  .*

34. spacer 2.10|2202869|32|CP032134|CRT,PILER-CR,CRISPRCasFinder matches to MF919512 (Mycobacterium phage Klein, complete genome) position: , mismatch: 8, identity: 0.75

ttatatacgtgcctgttcatatttctttaccg	CRISPR spacer
ttgaatacgtgcctgttcacagttcttgctcc	Protospacer
**. ***************.* *****  .*

35. spacer 2.10|2202869|32|CP032134|CRT,PILER-CR,CRISPRCasFinder matches to NC_026584 (Mycobacterium phage Minerva, complete genome) position: , mismatch: 8, identity: 0.75

ttatatacgtgcctgttcatatttctttaccg	CRISPR spacer
ttgaatacgtgcctgttcacagttcttgctcc	Protospacer
**. ***************.* *****  .*

36. spacer 2.10|2202869|32|CP032134|CRT,PILER-CR,CRISPRCasFinder matches to MF919534 (Mycobacterium phage Superphikiman, complete genome) position: , mismatch: 8, identity: 0.75

ttatatacgtgcctgttcatatttctttaccg	CRISPR spacer
ttgaatacgtgcctgttcacagttcttgctcc	Protospacer
**. ***************.* *****  .*

37. spacer 2.10|2202869|32|CP032134|CRT,PILER-CR,CRISPRCasFinder matches to NC_023690 (Mycobacterium phage Courthouse, complete genome) position: , mismatch: 8, identity: 0.75

ttatatacgtgcctgttcatatttctttaccg	CRISPR spacer
ttgaatacgtgcctgttcacagttcttgctcc	Protospacer
**. ***************.* *****  .*

38. spacer 2.10|2202869|32|CP032134|CRT,PILER-CR,CRISPRCasFinder matches to KF114875 (Mycobacterium phage Redno2, complete genome) position: , mismatch: 8, identity: 0.75

ttatatacgtgcctgttcatatttctttaccg	CRISPR spacer
ttgaatacgtgcctgttcacagttcttgctcc	Protospacer
**. ***************.* *****  .*

39. spacer 2.10|2202869|32|CP032134|CRT,PILER-CR,CRISPRCasFinder matches to NC_022067 (Mycobacterium phage Wanda, complete genome) position: , mismatch: 8, identity: 0.75

ttatatacgtgcctgttcatatttctttaccg	CRISPR spacer
ttgaatacgtgcctgttcacagttcttgctcc	Protospacer
**. ***************.* *****  .*

40. spacer 2.10|2202869|32|CP032134|CRT,PILER-CR,CRISPRCasFinder matches to MK524504 (Mycobacterium phage Hughesyang, complete genome) position: , mismatch: 8, identity: 0.75

ttatatacgtgcctgttcatatttctttaccg	CRISPR spacer
ttgaatacgtgcctgttcacagttcttgctcc	Protospacer
**. ***************.* *****  .*

41. spacer 2.10|2202869|32|CP032134|CRT,PILER-CR,CRISPRCasFinder matches to MK967379 (Mycobacterium phage HokkenD, complete genome) position: , mismatch: 8, identity: 0.75

ttatatacgtgcctgttcatatttctttaccg	CRISPR spacer
ttgaatacgtgcctgttcacagttcttgctcc	Protospacer
**. ***************.* *****  .*

42. spacer 2.10|2202869|32|CP032134|CRT,PILER-CR,CRISPRCasFinder matches to NC_028953 (Mycobacterium phage MiaZeal, complete genome) position: , mismatch: 8, identity: 0.75

ttatatacgtgcctgttcatatttctttaccg	CRISPR spacer
ttgaatacgtgcctgttcacagttcttgctcc	Protospacer
**. ***************.* *****  .*

43. spacer 2.10|2202869|32|CP032134|CRT,PILER-CR,CRISPRCasFinder matches to MF668284 (Mycobacterium phage Squint, complete genome) position: , mismatch: 8, identity: 0.75

ttatatacgtgcctgttcatatttctttaccg	CRISPR spacer
ttgaatacgtgcctgttcacagttcttgctcc	Protospacer
**. ***************.* *****  .*

44. spacer 2.13|2203049|32|CP032134|CRT,PILER-CR,CRISPRCasFinder matches to MG592553 (Vibrio phage 1.187.O._10N.286.49.F1, partial genome) position: , mismatch: 8, identity: 0.75

ctttcatacgttcctgctcgaaactggtttca---	CRISPR spacer
ctttcataccttcatgctcgaaatga---tcaatc	Protospacer
********* *** *********. .   ***

45. spacer 2.5|2202569|32|CP032134|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP011933 (Leptospira interrogans serovar Manilae strain UP-MMC-NIID LP plasmid pLIMLP1, complete sequence) position: , mismatch: 9, identity: 0.719

aagaaaaattcaaaggatgtattggttttggt	CRISPR spacer
ttcatggattcaaaggatatattgtttttgga	Protospacer
   * ..***********.***** ******

46. spacer 2.6|2202629|32|CP032134|CRT,PILER-CR,CRISPRCasFinder matches to MH450120 (Arthrobacter phage KeaneyLin, complete genome) position: , mismatch: 9, identity: 0.719

ttgaaactgaatttacatttacttatgaaata	CRISPR spacer
tatcgcatgaatttacatattcttatgaaatc	Protospacer
*   .  *********** * **********

47. spacer 2.5|2202569|32|CP032134|CRT,PILER-CR,CRISPRCasFinder matches to AP014315 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S31-C66, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 10, identity: 0.688

aagaaaaattcaaaggatgtattggttttggt	CRISPR spacer
ttcaggaattcaaagaatttattggttttaag	Protospacer
   *..*********.** **********..

48. spacer 2.13|2203049|32|CP032134|CRT,PILER-CR,CRISPRCasFinder matches to NC_007974 (Cupriavidus metallidurans CH34 megaplasmid, complete sequence) position: , mismatch: 10, identity: 0.688

ctttcatacgttcctgctcgaaactggtttca	CRISPR spacer
aatcatcctgttcctgctcgatactgttttca	Protospacer
  *.  . .************ **** *****

49. spacer 2.13|2203049|32|CP032134|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP046333 (Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed3) position: , mismatch: 10, identity: 0.688

ctttcatacgttcctgctcgaaactggtttca	CRISPR spacer
aatcatcctgttcctgctcgatactgttttca	Protospacer
  *.  . .************ **** *****

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1611276 : 1633620

Acinetobacter_phage(38.46%)

transposase,integrase,protease

attL 1610778:1610794|attR 1624736:1624752

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1610778:1610794	attL	NA	NA	NA	NA
AXY56592.1\|1611276_1611690_+\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	3.4e-13	45.2
AXY56593.1\|1611699_1613976_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	2.4e-164	43.0
AXY56594.1\|1614063_1614417_+	YnfA family protein	A0A218MNG8	uncultured_virus	2.9e-29	57.4
AXY56595.1\|1614462_1614936_-	hypothetical protein	NA	NA	NA	NA
AXY58418.1\|1614982_1615750_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
AXY56596.1\|1615810_1616731_-	ornithine carbamoyltransferase	NA	NA	NA	NA
AXY56597.1\|1616851_1617265_-	hypothetical protein	NA	NA	NA	NA
AXY56598.1\|1617271_1618415_+\|transposase	IS3-like element ISAba14 family transposase	NA	NA	NA	NA
AXY56599.1\|1619036_1619921_+	methylisocitrate lyase	NA	NA	NA	NA
AXY56600.1\|1619923_1621060_+	2-methylcitrate synthase	NA	NA	NA	NA
AXY56601.1\|1621523_1622006_+	transcriptional regulator	NA	NA	NA	NA
AXY56602.1\|1622023_1622335_-	TusE/DsrC/DsvC family sulfur relay protein	A0A2H4J8B6	uncultured_Caudovirales_phage	1.2e-18	47.5
AXY56603.1\|1622344_1622629_-	hypothetical protein	NA	NA	NA	NA
AXY56604.1\|1622646_1622997_-	hypothetical protein	NA	NA	NA	NA
AXY56605.1\|1623041_1623410_-	sulfurtransferase complex subunit TusD	A0A2H4JA39	uncultured_Caudovirales_phage	2.8e-14	40.4
AXY56606.1\|1623687_1624707_+\|integrase	site-specific integrase	A0A0R6PHH4	Moraxella_phage	2.6e-70	43.1
AXY56607.1\|1624703_1624991_-	DNA-binding protein	NA	NA	NA	NA
1624736:1624752	attR	NA	NA	NA	NA
AXY56608.1\|1625197_1625482_-	hypothetical protein	NA	NA	NA	NA
AXY56609.1\|1625478_1625721_-	hypothetical protein	NA	NA	NA	NA
AXY56610.1\|1625917_1626316_+	hypothetical protein	NA	NA	NA	NA
AXY56611.1\|1626764_1627442_-	helix-turn-helix domain-containing protein	A0A0P0IYD9	Acinetobacter_phage	4.1e-72	62.4
AXY56612.1\|1627517_1627697_+	hypothetical protein	J7HXD2	Acinetobacter_phage	1.4e-19	85.5
AXY56613.1\|1627755_1628256_+	XRE family transcriptional regulator	NA	NA	NA	NA
AXY56614.1\|1628303_1628561_+	hypothetical protein	A0A0D4DCC3	Acinetobacter_phage	2.7e-08	46.7
AXY56615.1\|1628557_1628854_+	hypothetical protein	A0A0D4DCL5	Acinetobacter_phage	9.0e-24	60.2
AXY56616.1\|1628850_1629804_+	helix-turn-helix domain-containing protein	A0A1V0E8B1	Vibrio_phage	1.3e-20	47.0
AXY56617.1\|1629800_1630214_+	hypothetical protein	A0A0P0HSP6	Acinetobacter_phage	5.6e-48	70.8
AXY56618.1\|1630224_1630638_+	antitermination protein	NA	NA	NA	NA
AXY56619.1\|1630789_1631044_+	hypothetical protein	NA	NA	NA	NA
AXY56620.1\|1631321_1631615_+	hypothetical protein	NA	NA	NA	NA
AXY56621.1\|1631901_1632927_-\|transposase	IS30 family transposase	A0A2K9V2S9	Faecalibacterium_phage	8.8e-26	30.7
AXY56622.1\|1633398_1633620_+\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_2

1637002 : 1672049

uncultured_Caudovirales_phage(30.43%)

protease,transposase,terminase,holin,tRNA,capsid,portal,head,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXY56631.1\|1637002_1637371_+	HNH endonuclease	G3EN93	Psychrobacter_phage	1.7e-32	58.6
AXY56632.1\|1637446_1637893_+\|terminase	phage terminase small subunit P27 family	G3EN95	Psychrobacter_phage	3.7e-37	53.2
AXY56633.1\|1637905_1639627_+\|terminase	terminase large subunit	G3EN96	Psychrobacter_phage	1.0e-252	72.2
AXY56634.1\|1639626_1640853_+\|portal	phage portal protein	A0A2D1GNU4	Pseudomonas_phage	2.3e-166	70.4
AXY56635.1\|1640833_1641499_+\|head,protease	HK97 family phage prohead protease	Q8W628	Enterobacteria_phage	2.0e-71	63.0
AXY56636.1\|1641505_1642705_+\|capsid	phage major capsid protein	A0A2D1GNH4	Pseudomonas_phage	8.4e-137	59.6
AXY56637.1\|1642758_1642962_+	hypothetical protein	NA	NA	NA	NA
AXY56638.1\|1642918_1643239_+\|head,tail	phage gp6-like head-tail connector protein	A0A2H4J8C5	uncultured_Caudovirales_phage	2.2e-07	36.1
AXY56639.1\|1643242_1643575_+\|head,tail	head-tail adaptor protein	A0A2H4J334	uncultured_Caudovirales_phage	1.8e-25	52.3
AXY56640.1\|1643578_1644034_+	hypothetical protein	A0A2H4JB20	uncultured_Caudovirales_phage	1.2e-46	56.4
AXY56641.1\|1644030_1644390_+	DUF3168 domain-containing protein	A0A2H4J570	uncultured_Caudovirales_phage	5.6e-36	56.1
AXY56642.1\|1644468_1644948_+	hypothetical protein	A0A2H4JBZ0	uncultured_Caudovirales_phage	2.5e-15	34.4
AXY56643.1\|1644949_1645387_+	hypothetical protein	NA	NA	NA	NA
AXY56644.1\|1645383_1645620_+	hypothetical protein	NA	NA	NA	NA
AXY56645.1\|1645674_1648602_+	hypothetical protein	A0A125SA53	Pseudomonas_phage	8.8e-79	43.2
AXY56646.1\|1648880_1649351_+	hypothetical protein	NA	NA	NA	NA
AXY56647.1\|1649420_1649909_+	hypothetical protein	NA	NA	NA	NA
AXY56648.1\|1649896_1650394_+	DUF1833 domain-containing protein	A0A1B1P9F1	Acinetobacter_phage	6.7e-48	53.9
AXY56649.1\|1650393_1650786_+	hypothetical protein	A0A1B1P9H4	Acinetobacter_phage	1.2e-44	67.7
AXY56650.1\|1650742_1653550_+	hypothetical protein	A0A1B1P9G8	Acinetobacter_phage	7.3e-240	48.3
AXY58419.1\|1653751_1655338_+	SGNH/GDSL hydrolase family protein	NA	NA	NA	NA
AXY56651.1\|1655338_1656082_+	hypothetical protein	NA	NA	NA	NA
AXY56652.1\|1656146_1656428_+\|holin	holin	C7BGD7	Burkholderia_phage	1.7e-19	55.2
AXY58420.1\|1656665_1657250_+	DUF3380 domain-containing protein	U5PZP0	Acinetobacter_phage	3.0e-55	58.1
AXY56653.1\|1658839_1659999_-\|transposase	IS3 family transposase	U5P429	Shigella_phage	1.9e-48	38.1
AXY56654.1\|1660912_1661467_-	hypothetical protein	A0A1E1EXN3	Acanthamoeba_castellanii_mimivirus	1.4e-17	35.3
AXY56655.1\|1661545_1661755_-	acyl-CoA thioesterase	NA	NA	NA	NA
AXY56656.1\|1661768_1663064_-	Y-family DNA polymerase	A0A2H4JBL5	uncultured_Caudovirales_phage	2.2e-154	60.0
AXY56657.1\|1663060_1663693_-	DNA polymerase V	A0A2H4J538	uncultured_Caudovirales_phage	2.3e-45	50.7
AXY58421.1\|1664006_1664201_+	hypothetical protein	NA	NA	NA	NA
AXY58422.1\|1664209_1664848_-	SOS response-associated peptidase	A0A218MNF5	uncultured_virus	8.1e-54	51.7
AXY56658.1\|1664955_1665621_-	DUF421 domain-containing protein	NA	NA	NA	NA
AXY56659.1\|1665688_1665985_-	hypothetical protein	NA	NA	NA	NA
AXY56660.1\|1666624_1668025_+	iron-containing redox enzyme family protein	NA	NA	NA	NA
AXY56661.1\|1668110_1669343_-	DUF4102 domain-containing protein	A0A0P0IRB7	Acinetobacter_phage	1.4e-126	57.0
AXY56662.1\|1669515_1669839_+\|tRNA	aminoacyl-tRNA deacylase	NA	NA	NA	NA
AXY56663.1\|1670475_1670736_+	hypothetical protein	NA	NA	NA	NA
AXY56664.1\|1670904_1672049_-\|transposase	IS3-like element ISAba14 family transposase	NA	NA	NA	NA

DBSCAN-SWA_3

1838364 : 1874860

Acinetobacter_phage(87.1%)

terminase,head

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXY56800.1\|1838364_1842087_-	hypothetical protein	A0A1B1P9G8	Acinetobacter_phage	1.4e-235	46.9
AXY56801.1\|1842043_1842436_-	hypothetical protein	A0A1B1P9H4	Acinetobacter_phage	5.0e-46	70.4
AXY56802.1\|1842435_1842933_-	DUF1833 domain-containing protein	A0A1B1P9F1	Acinetobacter_phage	1.3e-46	52.7
AXY56803.1\|1842920_1843397_-	hypothetical protein	NA	NA	NA	NA
AXY56804.1\|1843441_1847521_-	hypothetical protein	A0A0D4DC37	Acinetobacter_phage	5.8e-97	27.0
AXY56805.1\|1847991_1848198_-	hypothetical protein	NA	NA	NA	NA
AXY56806.1\|1848426_1848681_-	hypothetical protein	A0A1B1P9F7	Acinetobacter_phage	5.2e-20	56.1
AXY56807.1\|1848698_1849169_-	hypothetical protein	A0A0N7IRG3	Acinetobacter_phage	5.2e-42	61.2
AXY56808.1\|1849208_1850144_-	hypothetical protein	A0A0P0IKN0	Acinetobacter_phage	1.6e-42	33.9
AXY58435.1\|1850776_1851220_-	SH3 domain-containing protein	NA	NA	NA	NA
AXY56809.1\|1851391_1851826_-	hypothetical protein	NA	NA	NA	NA
AXY56810.1\|1851822_1852215_-	hypothetical protein	A0A0P0IDX0	Acinetobacter_phage	1.6e-15	40.4
AXY56811.1\|1852256_1852913_-	hypothetical protein	NA	NA	NA	NA
AXY58436.1\|1852944_1853313_-	glutamate 5-kinase	A0A1B1P9E3	Acinetobacter_phage	2.4e-26	50.4
AXY56812.1\|1853312_1853687_-	hypothetical protein	A0A0D4DC24	Acinetobacter_phage	1.0e-32	57.8
AXY56813.1\|1854196_1855144_-	Ig domain-containing protein	A0A0D4DBM4	Acinetobacter_phage	8.6e-153	84.4
AXY56814.1\|1855153_1855918_-	hypothetical protein	A0A0D4DCP5	Acinetobacter_phage	2.5e-78	66.9
AXY56815.1\|1856027_1856300_-	hypothetical protein	NA	NA	NA	NA
AXY56816.1\|1856364_1856985_-	hypothetical protein	NA	NA	NA	NA
AXY56817.1\|1857032_1858157_-\|head	phage head morphogenesis protein	A0A0P0IR98	Acinetobacter_phage	4.0e-96	49.2
AXY56818.1\|1858159_1859587_-	DUF4055 domain-containing protein	A0A0D4DCP1	Acinetobacter_phage	6.3e-115	45.2
AXY56819.1\|1859588_1860992_-\|terminase	terminase	J7I460	Acinetobacter_phage	3.2e-196	72.0
AXY56820.1\|1860981_1861446_-	DUF2280 domain-containing protein	A0A0D4DC15	Acinetobacter_phage	2.7e-35	53.5
AXY56821.1\|1861504_1862146_-	hypothetical protein	A0A2H4JE07	uncultured_Caudovirales_phage	6.3e-107	85.4
AXY56822.1\|1862105_1862543_-	hypothetical protein	A0A0P0IVP9	Acinetobacter_phage	2.6e-35	53.1
AXY56823.1\|1863803_1863983_-	hypothetical protein	NA	NA	NA	NA
AXY56824.1\|1864308_1864602_-	hypothetical protein	NA	NA	NA	NA
AXY56825.1\|1864739_1864994_-	hypothetical protein	NA	NA	NA	NA
AXY56826.1\|1864997_1865438_-	hypothetical protein	A0A2H4J548	uncultured_Caudovirales_phage	4.6e-24	39.6
AXY56827.1\|1865442_1865838_-	DUF559 domain-containing protein	A0A0P0I8E8	Acinetobacter_phage	2.3e-35	56.2
AXY56828.1\|1865834_1866254_-	hypothetical protein	NA	NA	NA	NA
AXY56829.1\|1866253_1866460_-	hypothetical protein	NA	NA	NA	NA
AXY56830.1\|1866456_1867245_-	hypothetical protein	A0A0P0IDV1	Acinetobacter_phage	7.1e-68	49.6
AXY56831.1\|1867241_1868126_-	MarR family transcriptional regulator	A0A0P0IKQ2	Acinetobacter_phage	8.2e-89	64.8
AXY56832.1\|1868122_1868419_-	hypothetical protein	A0A0D4DCL5	Acinetobacter_phage	1.9e-26	63.9
AXY56833.1\|1868415_1868670_-	hypothetical protein	A0A0D4DCC3	Acinetobacter_phage	4.5e-08	45.6
AXY56834.1\|1868729_1869050_-	XRE family transcriptional regulator	A0A0P0HSE9	Acinetobacter_phage	1.2e-34	70.8
AXY58437.1\|1869058_1869247_-	hypothetical protein	A0A2H4JCB6	uncultured_Caudovirales_phage	1.7e-12	66.7
AXY58438.1\|1869380_1870079_+	helix-turn-helix transcriptional regulator	A0A2H4J597	uncultured_Caudovirales_phage	9.3e-96	76.9
AXY56835.1\|1870275_1870701_+	hypothetical protein	A0A0N7IRF7	Acinetobacter_phage	3.6e-18	40.0
AXY56836.1\|1870700_1871249_+	hypothetical protein	NA	NA	NA	NA
AXY56837.1\|1871260_1872388_+	ATP-binding protein	A0A0P0HSM9	Acinetobacter_phage	1.5e-172	80.4
AXY56838.1\|1873818_1874076_+	hypothetical protein	NA	NA	NA	NA
AXY56839.1\|1874075_1874447_+	hypothetical protein	A0A0P0HSE1	Acinetobacter_phage	5.6e-15	45.1
AXY58439.1\|1874614_1874860_+	hypothetical protein	A0A0P0J067	Acinetobacter_phage	4.7e-18	70.3

DBSCAN-SWA_4

2183355 : 2194053

Indivirus(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXY57107.1\|2183355_2185986_+	DNA mismatch repair protein MutS	A0A1V0SDQ0	Indivirus	1.8e-35	24.1
AXY57108.1\|2186312_2186636_+	ferredoxin family protein	NA	NA	NA	NA
AXY57109.1\|2186766_2187486_+	peptidase M15	NA	NA	NA	NA
AXY57110.1\|2187619_2188285_+	O-methyltransferase	S5YRC3	Mycobacterium_phage	1.4e-29	37.7
AXY57111.1\|2188444_2189287_-	universal stress protein	A0A2H4J154	uncultured_Caudovirales_phage	1.9e-34	35.0
AXY57112.1\|2189407_2190025_-	acyltransferase	M1HKK6	Paramecium_bursaria_Chlorella_virus	3.7e-11	38.7
AXY57113.1\|2190017_2190614_-	hypothetical protein	A0A1X9I5T8	Streptococcus_phage	1.5e-22	35.6
AXY57114.1\|2190727_2191918_-	HlyD family type I secretion periplasmic adaptor subunit	NA	NA	NA	NA
AXY57115.1\|2191914_2194053_-	type I secretion system permease/ATPase	W8CYL7	Bacillus_phage	2.2e-26	25.0

DBSCAN-SWA_5

2361546 : 2389045

uncultured_Caudovirales_phage(40.91%)

transposase,terminase,capsid,portal,head,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXY57249.1\|2361546_2362691_-\|transposase	IS3-like element ISAba14 family transposase	NA	NA	NA	NA
AXY57250.1\|2363889_2364312_-	hypothetical protein	A0A1V0E842	Vibrio_phage	6.3e-31	52.5
AXY57251.1\|2364477_2364954_-	hypothetical protein	NA	NA	NA	NA
AXY57252.1\|2364979_2365276_-	hypothetical protein	NA	NA	NA	NA
AXY57253.1\|2365426_2365618_-	hypothetical protein	NA	NA	NA	NA
AXY57254.1\|2365556_2365934_-	hypothetical protein	NA	NA	NA	NA
AXY57255.1\|2365934_2366486_-	lysozyme	L7TJR2	Pseudomonas_virus	7.7e-37	42.4
AXY57256.1\|2366475_2366706_-	hypothetical protein	NA	NA	NA	NA
AXY57257.1\|2366752_2369539_-	hypothetical protein	A0A1B1P9G8	Acinetobacter_phage	4.3e-200	42.0
AXY57258.1\|2369516_2369882_-	hypothetical protein	A0A1B1P9H4	Acinetobacter_phage	1.7e-32	55.6
AXY57259.1\|2369881_2370376_-	hypothetical protein	A0A1B1P9F1	Acinetobacter_phage	1.3e-35	50.9
AXY57260.1\|2370368_2371379_-	hypothetical protein	K7ZJS7	Xanthomonas_citri_phage	3.1e-31	39.9
AXY57261.1\|2371381_2372320_-	hypothetical protein	V5Q8S0	Xylella_phage	7.3e-19	29.0
AXY57262.1\|2372319_2373078_-	hypothetical protein	NA	NA	NA	NA
AXY57263.1\|2373074_2375627_-	hypothetical protein	A0A2H4J326	uncultured_Caudovirales_phage	8.7e-99	32.6
AXY58475.1\|2375690_2376287_-	hypothetical protein	NA	NA	NA	NA
AXY57264.1\|2376411_2376642_-	hypothetical protein	NA	NA	NA	NA
AXY57265.1\|2376638_2377076_-	hypothetical protein	A0A2H4J335	uncultured_Caudovirales_phage	2.6e-11	36.0
AXY57266.1\|2377077_2377557_-	hypothetical protein	A0A2H4J511	uncultured_Caudovirales_phage	5.0e-16	38.5
AXY57267.1\|2377631_2378279_-	ORF6N domain-containing protein	A0A2R2Z302	Escherichia_phage	6.3e-30	50.4
AXY57268.1\|2378680_2379058_-	hypothetical protein	NA	NA	NA	NA
AXY57269.1\|2379047_2379239_-	hypothetical protein	NA	NA	NA	NA
AXY57270.1\|2379557_2379920_-	DUF3168 domain-containing protein	A0A2H4J570	uncultured_Caudovirales_phage	1.9e-36	57.7
AXY57271.1\|2379916_2380444_-	hypothetical protein	A0A2H4JB20	uncultured_Caudovirales_phage	1.9e-32	45.3
AXY57272.1\|2380455_2380788_-\|head,tail	head-tail adaptor protein	A0A2H4J8R2	uncultured_Caudovirales_phage	1.2e-21	54.5
AXY57273.1\|2381185_2381440_-	hypothetical protein	NA	NA	NA	NA
AXY57274.1\|2381447_2381735_-\|head,tail	phage gp6-like head-tail connector protein	NA	NA	NA	NA
AXY57275.1\|2381715_2382990_-\|portal	phage portal protein	A0A2H4JB65	uncultured_Caudovirales_phage	9.9e-128	53.2
AXY57276.1\|2382998_2383313_-	hypothetical protein	NA	NA	NA	NA
AXY57277.1\|2383361_2384690_-\|capsid	phage major capsid protein	A0A0R6PCM7	Moraxella_phage	9.3e-129	55.8
AXY57278.1\|2384686_2385322_-	peptidase U35	A0A0R6PGX0	Moraxella_phage	6.0e-41	46.3
AXY57279.1\|2385334_2385517_-	hypothetical protein	J7I0V8	Acinetobacter_phage	1.2e-05	49.1
AXY57280.1\|2385513_2387196_-\|terminase	terminase large subunit	A0A2H4J6B3	uncultured_Caudovirales_phage	3.1e-193	59.6
AXY57281.1\|2387197_2387656_-	hypothetical protein	A0A2H4J8R0	uncultured_Caudovirales_phage	1.8e-18	42.5
AXY57282.1\|2388144_2388381_-	hypothetical protein	NA	NA	NA	NA
AXY57283.1\|2388377_2388692_-	HNH endonuclease	A0A0R6PHK1	Moraxella_phage	1.3e-20	51.6
AXY57284.1\|2388691_2389045_-	hypothetical protein	A0A218MNA6	uncultured_virus	7.5e-09	36.0

Anti-CRISPR protein detection

Acr_ID: CP032134.1|AXY57279.1|2385334_2385517_-|hypothetical-protein

Click the colored protein region to show detailed information

Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

CP032134.1|AXY57279.1|2385334_2385517_-|hypothetical-protein

2385334_2385517_-

60 aa aa

2361546-2389045

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
CP032134_2	TypeI-F	2.4\|2202509\|32\|CP032134\|CRT,PILER-CR,CRISPRCasFinder	2202509-2202540	32	2384101-2384132	2
CP032134_2	TypeI-F	2.12\|2202989\|32\|CP032134\|CRT,PILER-CR,CRISPRCasFinder	2202989-2203020	32	2381205-2381236	1
CP032134_2	TypeI-F	2.13\|2203049\|32\|CP032134\|CRT,PILER-CR,CRISPRCasFinder	2203049-2203080	32	2376435-2376466	2

1. spacer 2.4|2202509|32|CP032134|CRT,PILER-CR,CRISPRCasFinder matches to CP032134 position: 2384101-2384132, mismatch: 2

ttaatattgaacggcacctgacgcatacgcgg	CRISPR spacer
ttgatattgaacggcacctggcgcatacgcgg	Protospacer
**.*****************.***********

2. spacer 2.12|2202989|32|CP032134|CRT,PILER-CR,CRISPRCasFinder matches to CP032134 position: 2381205-2381236, mismatch: 1

atccaattatctgcagggttataaaaatcaca	CRISPR spacer
atccaattatctgaagggttataaaaatcaca	Protospacer
************* ******************

3. spacer 2.13|2203049|32|CP032134|CRT,PILER-CR,CRISPRCasFinder matches to CP032134 position: 2376435-2376466, mismatch: 2

ctttcatacgttcctgctcgaaactggtttca	CRISPR spacer
cttttaaacgttcctgctcgaaactggtttca	Protospacer
****.* *************************

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP032133

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. CP032134

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

Click the colored protein region to show detailed information