CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Prophage number
CP022086	Escherichia coli O104:H4 strain FDAARGOS_348 chromosome, complete genome	0 crisprs	PrimPol,cas3,c2c9_V-U4,DEDDh,DinG,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,RT	13
CP022087	Escherichia coli O104:H4 strain FDAARGOS_348 plasmid unnamed2, complete sequence	0 crisprs	NA	2
CP022085	Escherichia coli O104:H4 strain FDAARGOS_348 plasmid unnamed1, complete sequence	0 crisprs	DEDDh	1

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

345172 : 387606

Enterobacteria_phage(57.69%)

head,portal,terminase,lysis,capsid,tail,integrase

attL 343450:343465|attR 366601:366616

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
343450:343465	attL	NA	NA	NA	NA
ASF01262.1\|345172_346243_-\|integrase	integrase	Q9MCR4	Enterobacteria_phage	5.1e-202	100.0
ASF01263.1\|346220_346439_-	excisionase	Q77WA4	Escherichia_phage	3.7e-35	100.0
ASF01264.1\|346478_346646_-	hypothetical protein	A5VWB7	Enterobacteria_phage	2.9e-27	98.2
ASF05753.1\|346578_346764_+	hypothetical protein	NA	NA	NA	NA
ASF01265.1\|346818_347070_+	hypothetical protein	NA	NA	NA	NA
ASF01266.1\|346960_347491_+	hypothetical protein	NA	NA	NA	NA
ASF01267.1\|347701_347923_-	conjugal transfer protein TraR	A0A0K2FI84	Escherichia_phage	2.9e-35	100.0
ASF01268.2\|348021_348303_-	cell division protein ZapA	A0A0P0ZE02	Stx2-converting_phage	5.5e-47	98.9
ASF01269.1\|348313_348505_-	DUF1382 domain-containing protein	A0A0P0ZC67	Stx2-converting_phage	4.7e-26	98.4
ASF01270.1\|348477_348660_-	DUF1317 domain-containing protein	A0A0N7CHV0	Escherichia_phage	1.3e-28	98.3
ASF01271.1\|348656_349337_-	exonuclease	B6DZ61	Enterobacteria_phage	5.1e-131	98.2
ASF01272.1\|349333_350119_-	phage recombination protein Bet	A0A1I9LJN0	Stx_converting_phage	6.3e-149	100.0
ASF01273.1\|350124_350421_-	host-nuclease inhibitor protein Gam	A0A1I9LJN1	Stx_converting_phage	6.2e-49	99.0
ASF01274.1\|350496_350703_-	cell division inhibitor protein	K7P6H3	Enterobacteria_phage	3.2e-28	85.3
ASF01275.1\|351300_352053_-	helix-turn-helix transcriptional regulator	Q76H56	Enterobacteria_phage	1.4e-92	75.0
ASF01276.1\|352095_352326_+	transcriptional regulator	A0A2H4FNF3	Salmonella_phage	1.5e-21	68.0
ASF01277.1\|352395_352935_+	regulator	M9NZI6	Enterobacteria_phage	1.2e-61	66.1
ASF01278.1\|352931_353951_+	Replication protein O	A0A0M5M7Y1	Salmonella_phage	9.7e-110	63.4
ASF01279.1\|353947_354649_+	Replication protein P	M1FJ72	Enterobacteria_phage	1.4e-128	98.7
ASF01280.1\|354645_354948_+	protein ren	M1FPD5	Enterobacteria_phage	6.1e-44	97.8
ASF01282.1\|355193_355988_+	recombinase	A0A2K9V406	Faecalibacterium_phage	7.5e-09	28.9
ASF01283.1\|356099_356339_+	hypothetical protein	NA	NA	NA	NA
ASF01284.1\|356657_357167_+	hypothetical protein	NA	NA	NA	NA
ASF01285.1\|357263_357365_+	hypothetical protein	NA	NA	NA	NA
ASF01286.1\|357361_357817_+	hypothetical protein	I6PD71	Cronobacter_phage	4.9e-61	67.5
ASF01287.1\|357816_357987_+	hypothetical protein	K7P7K0	Enterobacteria_phage	1.4e-13	69.8
ASF01288.1\|357979_358270_+	DUF1364 domain-containing protein	K7PGZ6	Enterobacteria_phage	2.8e-46	92.7
ASF01289.1\|358624_358765_+	YlcG family protein	K7PHH3	Enterobacteria_phage	6.5e-09	69.8
ASF01290.1\|358850_359234_+	antitermination protein Q	A0A088CD47	Shigella_phage	4.4e-55	83.3
ASF01291.1\|359422_360505_-	porin OmpD	Q1MVN1	Enterobacteria_phage	4.4e-161	78.7
ASF01292.1\|361093_361309_+\|lysis	lysis protein S	A5LH82	Enterobacteria_phage	9.0e-34	100.0
ASF01293.1\|361308_361806_+	lysozyme	M1FJA0	Enterobacteria_phage	3.2e-90	97.6
ASF01294.1\|361802_362240_+\|lysis	lysis protein	K7P710	Enterobacteria_phage	3.0e-68	94.5
ASF01295.1\|362444_362966_+	DNA-binding protein	K7P7K9	Enterobacteria_phage	1.5e-93	100.0
ASF01296.1\|363105_363270_-	hypothetical protein	NA	NA	NA	NA
ASF01297.2\|363315_363726_-	hypothetical protein	C6ZCX4	Enterobacteria_phage	1.3e-52	76.3
ASF01298.1\|363782_364016_-	DUF3950 domain-containing protein	A0A0K2FIR8	Escherichia_phage	7.3e-21	94.4
ASF01299.1\|364121_364265_+	DNA-packaging protein	NA	NA	NA	NA
ASF01300.1\|364404_364950_+\|terminase	terminase small subunit	A0A0K2FIG2	Enterobacteria_phage	2.8e-95	100.0
ASF01302.1\|366845_367052_+\|head,tail	Lambda prophage-derived head-to-tail joining protein W	A0A2R9YJL2	Escherichia_phage	5.8e-30	100.0
366601:366616	attR	NA	NA	NA	NA
ASF01303.1\|367048_368650_+\|portal	phage portal protein	A0A0K2FJC0	Enterobacteria_phage	1.2e-311	99.8
ASF01304.1\|368630_369950_+	S49 family peptidase	A0A2I6TC87	Escherichia_phage	1.4e-230	97.7
ASF01305.1\|369959_370292_+\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	1.7e-55	100.0
ASF01306.1\|370347_371373_+\|capsid	minor capsid protein E	C6ZCY2	Enterobacteria_phage	4.7e-189	97.9
ASF01307.1\|371414_371810_+	DNA-packaging protein FI	A0A2R9YJP4	Escherichia_phage	1.1e-58	95.5
ASF01308.1\|371821_372175_+\|tail	phage tail protein	A0A2R9YJJ5	Escherichia_phage	6.4e-61	97.4
AVL26729.1\|372186_372765_+\|tail	phage tail protein	A0A2R9YJK4	Escherichia_phage	5.9e-80	99.5
ASF01309.1\|372761_373157_+\|tail	phage tail protein	A0A2R9YJI2	Escherichia_phage	8.5e-70	98.5
ASF01310.2\|373164_373905_+\|tail	phage tail protein	A0A0K2FJ05	Enterobacteria_phage	6.8e-129	97.2
ASF01311.1\|373920_374343_+\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	1.4e-59	85.0
ASF01312.1\|374324_374759_+\|tail	phage tail assembly protein T	A0A0K2FJB3	Enterobacteria_phage	6.9e-65	100.0
ASF01313.1\|374751_377313_+\|tail	phage tail tape measure protein	A0A0K2FI43	Enterobacteria_phage	0.0e+00	97.8
ASF01314.1\|377309_377639_+\|tail	phage tail protein	A0A0K2FIE9	Enterobacteria_phage	9.6e-59	100.0
ASF01315.1\|377638_378337_+\|tail	phage minor tail protein L	A0A0K2FJ01	Enterobacteria_phage	4.7e-132	98.3
ASF01316.1\|378342_379086_+\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	2.1e-146	96.8
ASF01317.1\|378983_379655_+\|tail	tail assembly protein	A0A2R9YJH6	Escherichia_phage	8.1e-105	100.0
ASF01318.1\|379715_383213_+	host specificity protein J	A0A291AWT4	Escherichia_phage	0.0e+00	97.6
ASF01319.1\|383283_383883_+	Ail/Lom family protein	A5LH44	Enterobacteria_phage	8.2e-109	97.5
ASF05754.1\|383947_387022_+\|tail	phage tail protein	U5N099	Enterobacteria_phage	2.5e-68	82.1
ASF01320.1\|387021_387606_+\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	9.2e-105	95.4

DBSCAN-SWA_2

652531 : 716579

Escherichia_phage(90.79%)

bacteriocin,portal,terminase,lysis,capsid,tail,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
ASF01550.1\|652531_653842_-	DUF3596 domain-containing protein	A0A0P0ZGT7	Escherichia_phage	2.4e-254	100.0
ASF01551.1\|653894_654179_-	DNA-binding protein	A0A0P0ZGY2	Escherichia_phage	7.0e-50	100.0
ASF01552.1\|654224_654476_-	DUF4222 domain-containing protein	G3CFG8	Escherichia_phage	2.9e-39	100.0
ASF01553.1\|654839_655220_-	DUF1627 domain-containing protein	A0A0P0ZFT6	Escherichia_phage	1.2e-52	100.0
ASF01554.1\|655255_655468_-	DUF1382 domain-containing protein	A0A0P0ZGA1	Escherichia_phage	7.1e-31	100.0
ASF01555.1\|655427_656054_-	adenine methylase	G9L6F9	Escherichia_phage	1.8e-122	100.0
ASF01556.1\|656050_656482_-	regulator	A0A2R2Z303	Escherichia_phage	7.3e-75	100.0
ASF01557.1\|656537_657167_-	phage antirepressor Ant	G9L6G1	Escherichia_phage	2.3e-117	100.0
ASF01558.1\|657416_657701_-	phage antirepressor Ant	G9L6G2	Escherichia_phage	4.1e-50	100.0
ASF01559.1\|658056_658953_-	DUF551 domain-containing protein	A0A0N7KZV3	Escherichia_phage	5.4e-173	100.0
ASF01560.1\|658955_659147_-	hypothetical protein	A0A0P0ZG45	Escherichia_phage	3.3e-27	100.0
ASF01561.1\|659148_659556_-	hypothetical protein	A0A125RPT9	Escherichia_phage	1.3e-70	100.0
ASF01562.1\|659552_660278_-	hypothetical protein	A0A0P0ZFU9	Escherichia_phage	3.3e-128	100.0
ASF01563.1\|660428_660824_-	hypothetical protein	A0A0P0ZG44	Escherichia_phage	1.1e-69	100.0
ASF01564.1\|660900_661722_-	DUF2303 domain-containing protein	A0A2R2Z323	Escherichia_phage	2.3e-149	100.0
ASF01565.1\|661785_662133_-	hypothetical protein	A0A0P0ZGH3	Escherichia_phage	5.9e-59	100.0
ASF01566.1\|662207_662795_-	DUF669 domain-containing protein	A0A0N7KZV4	Escherichia_phage	1.2e-107	100.0
ASF01567.1\|662794_663484_-	exonuclease	A0A0P0ZFI7	Escherichia_phage	3.5e-135	100.0
ASF01568.1\|663480_664431_-	recombinase RecT	A0A0P0ZFY9	Escherichia_phage	1.1e-179	100.0
ASF01569.1\|664447_664729_-	host nuclease inhibitor GamL	A0A0P0ZFG3	Escherichia_phage	1.1e-47	100.0
ASF01570.1\|664749_665031_-	AbrB family transcriptional regulator	A0A0P0ZGC3	Escherichia_phage	3.0e-45	100.0
ASF01571.1\|665042_665255_-	cell division inhibitor protein	A0A0P0ZGD1	Escherichia_phage	5.8e-33	100.0
ASF01572.1\|665325_666000_-	hypothetical protein	A0A0P0ZGP9	Escherichia_phage	1.3e-123	100.0
ASF01573.1\|666155_666350_+	hypothetical protein	A0A0N7KZV5	Escherichia_phage	1.3e-31	100.0
ASF05764.1\|666255_666903_-	hypothetical protein	A0A0P0ZGC2	Escherichia_phage	9.5e-119	100.0
ASF01574.1\|667658_668612_-	restriction endonuclease	A0A0P0ZG22	Escherichia_phage	7.0e-187	100.0
ASF01575.1\|668608_670078_-	SAM-dependent methyltransferase	A0A2R2Z316	Escherichia_phage	3.5e-286	100.0
ASF01576.1\|670172_670886_-	LexA family transcriptional repressor	A0A2R2X2B0	Escherichia_phage	6.3e-132	100.0
ASF01577.1\|670981_671185_+	Cro/Cl family transcriptional regulator	A0A2R2Z333	Escherichia_phage	2.0e-30	100.0
ASF01578.1\|671355_671550_+	hypothetical protein	NA	NA	NA	NA
ASF01579.1\|671716_672094_+	hypothetical protein	A0A2R2Z329	Escherichia_phage	4.0e-61	100.0
AVL26735.1\|672087_673608_+	ATP-dependent helicase	A0A0N7KZV6	Escherichia_phage	1.4e-306	100.0
ASF01580.1\|673597_674569_+	DNA primase	A0A0P0ZFY3	Escherichia_phage	6.5e-196	100.0
ASF01581.1\|674568_675018_+	DUF1367 domain-containing protein	A0A0P0ZFW0	Escherichia_phage	7.6e-83	100.0
ASF01582.1\|675025_675589_+	recombination protein NinG	A0A0P0ZG59	Escherichia_phage	8.9e-105	100.0
ASF01583.1\|675585_675780_+	protein ninH	A0A0P0ZGE1	Escherichia_phage	8.4e-31	100.0
AVL26736.1\|675772_676207_+	antitermination protein	A0A0P0ZGJ3	Escherichia_phage	4.8e-82	100.0
ASF01584.1\|676195_676441_-	hypothetical protein	A0A0P0ZGS0	Escherichia_phage	5.0e-36	100.0
ASF01585.1\|676455_676608_+	DNA methylase	A0A2R2Z327	Escherichia_phage	4.0e-20	100.0
ASF01586.1\|676990_677950_+	Shiga toxin Stx2 subunit A	Q776Q3	Enterobacteria_phage	5.6e-176	100.0
ASF01587.1\|677961_678231_+	Shiga toxin Stx2 subunit B	A0A2R2Z326	Escherichia_phage	1.2e-43	100.0
ASF01588.1\|678716_680654_+	DUF1737 domain-containing protein	A0A0P0ZGW7	Escherichia_phage	0.0e+00	100.0
ASF01589.1\|680790_680970_+	DUF1378 domain-containing protein	A0A2R2Z345	Escherichia_phage	2.2e-25	100.0
ASF01590.1\|681010_681256_+	DUF826 domain-containing protein	A0A0P0ZGR2	Escherichia_phage	8.8e-17	100.0
ASF01591.1\|681333_681549_+\|holin	holin	A0A0P0ZFW5	Escherichia_phage	9.0e-34	100.0
ASF01592.1\|681553_682087_+	lysozyme	V5USG4	Shigella_phage	7.9e-103	100.0
ASF01593.1\|682361_682931_+	hypothetical protein	A0A2R2Z339	Escherichia_phage	1.8e-105	100.0
ASF01594.1\|683087_683552_+\|lysis	lysis protein	A0A2R2Z341	Escherichia_phage	5.8e-78	100.0
ASF01595.1\|683583_683877_-	lipoprotein bor	A0A2R2X2B2	Escherichia_phage	6.8e-48	100.0
ASF01596.1\|683984_684230_+	hypothetical protein	A0A2R2Z338	Escherichia_phage	8.4e-44	100.0
ASF01597.1\|684285_685092_+\|terminase	terminase	A0A2R2Z334	Escherichia_phage	7.6e-134	100.0
ASF01598.1\|685072_686779_+\|terminase	terminase	A0A2R2Z350	Escherichia_phage	0.0e+00	100.0
ASF01599.1\|686778_688923_+\|portal	portal protein	A0A0P0ZGR1	Escherichia_phage	0.0e+00	100.0
ASF01600.1\|689080_690088_+	hypothetical protein	A0A0P0ZGF7	Escherichia_phage	2.3e-180	100.0
ASF01601.1\|690111_691326_+\|capsid	N4-gp56 family major capsid protein	A0A0N7KZY1	Escherichia_phage	1.7e-233	100.0
ASF01602.1\|691380_691770_+	hypothetical protein	A0A0P0ZFT7	Escherichia_phage	3.8e-62	100.0
ASF01603.1\|691820_692282_+	hypothetical protein	A0A2R2Z354	Escherichia_phage	7.8e-75	100.0
ASF01604.1\|692265_692829_+	hypothetical protein	A0A0P0ZGG2	Escherichia_phage	4.1e-102	100.0
ASF01605.1\|692828_693479_+	hypothetical protein	A0A0P0ZG46	Escherichia_phage	4.6e-121	100.0
ASF01606.1\|693475_696067_+\|tail	phage tail protein	A0A0P0ZGL7	Escherichia_phage	6.1e-209	100.0
AVL26737.1\|696153_696666_+	hypothetical protein	A0A0P0ZFL3	Escherichia_phage	1.2e-92	100.0
ASF05765.1\|696899_698525_+	hypothetical protein	A0A0P0ZG99	Escherichia_phage	0.0e+00	100.0
ASF01607.1\|698521_699790_+	host specificity protein J	A0A2R2Z364	Escherichia_phage	4.9e-220	100.0
ASF01608.1\|699804_700083_+	hypothetical protein	A0A088CD71	Shigella_phage	1.1e-50	100.0
AVL26738.1\|700088_700706_+	hypothetical protein	A0A2R2Z362	Escherichia_phage	1.1e-121	100.0
ASF01609.1\|700796_701531_+	hypothetical protein	A0A0P0ZH34	Escherichia_phage	9.7e-136	100.0
ASF01610.1\|701761_701902_+	Hok/Gef family protein	A0A2R2X2B4	Escherichia_phage	3.1e-19	100.0
ASF01611.1\|701958_702360_+	hypothetical protein	A0A088CC37	Shigella_phage	1.2e-71	100.0
ASF01612.1\|702454_703111_+	hypothetical protein	A0A0P0ZGF6	Escherichia_phage	5.1e-104	100.0
ASF01613.1\|703113_703560_+	hypothetical protein	A0A2R2Z357	Escherichia_phage	6.2e-77	100.0
ASF01614.1\|703569_703821_+\|bacteriocin	bacteriocin	A0A2R2Z351	Escherichia_phage	7.9e-13	100.0
ASF01615.1\|703831_705097_+	hypothetical protein	A0A0P0ZFI5	Escherichia_phage	2.4e-206	100.0
AVL26739.1\|705166_713548_+	hypothetical protein	A0A0P0ZGX9	Escherichia_phage	0.0e+00	100.0
ASF01617.1\|713885_714113_+	hypothetical protein	Q7Y2P9	Escherichia_phage	2.0e-23	92.7
ASF01618.1\|714316_714547_+	hypothetical protein	NA	NA	NA	NA
ASF01619.1\|714479_714653_+	stress-induced protein	Q9KX95	Enterobacteria_phage	4.9e-06	96.3
ASF01620.1\|714735_716064_-	transporter	Q9KX94	Enterobacteria_phage	3.7e-234	99.1
ASF01621.1\|716084_716579_-	FMN reductase	Q9KX93	Enterobacteria_phage	1.1e-50	96.9

DBSCAN-SWA_3

1031492 : 1092962

Enterobacteria_phage(42.31%)

protease,head,portal,terminase,lysis,capsid,tail,integrase,holin

attL 1027308:1027322|attR 1048247:1048261

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1027308:1027322	attL	NA	NA	NA	NA
ASF01916.1\|1031492_1032623_-\|integrase	integrase	O21940	Phage_21	4.4e-103	51.4
ASF01917.1\|1032600_1032849_-	excisionase	NA	NA	NA	NA
ASF01918.1\|1032913_1035385_-	exonuclease	K7PLW7	Enterobacteria_phage	1.8e-56	59.2
ASF01919.1\|1035477_1035669_-	DUF1482 domain-containing protein	NA	NA	NA	NA
ASF01920.1\|1035665_1035854_-	cell division inhibition protein DicB	NA	NA	NA	NA
ASF05788.1\|1036203_1036419_+	hypothetical protein	NA	NA	NA	NA
ASF01921.2\|1036348_1036615_+	hypothetical protein	NA	NA	NA	NA
ASF01922.1\|1036603_1036942_-	hypothetical protein	A0A2R2Z306	Escherichia_phage	2.5e-06	51.0
ASF05789.1\|1036953_1037106_-	DUF1391 domain-containing protein	M4QQ57	Salicola_phage	6.0e-08	55.3
ASF01923.1\|1037402_1037822_-	transcriptional regulator	A0A2I6PIE7	Escherichia_phage	4.2e-19	47.5
ASF01924.1\|1037901_1038156_+	hypothetical protein	A0A2I6PIE5	Escherichia_phage	2.8e-18	60.3
ASF01925.1\|1038152_1038578_+	Rha family transcriptional regulator	NA	NA	NA	NA
ASF05790.1\|1038600_1039563_+	DNA-binding protein	U5P0A0	Shigella_phage	2.1e-69	51.2
ASF01926.1\|1039603_1040029_+	hypothetical protein	A0A0U2QQN3	Escherichia_phage	1.3e-63	94.0
ASF01927.1\|1040203_1040869_+	hypothetical protein	NA	NA	NA	NA
ASF01928.1\|1041049_1041262_+	Hok/Gef family protein	A0A0U2QV81	Escherichia_phage	5.2e-26	90.0
ASF01929.1\|1041303_1041483_-	hypothetical protein	NA	NA	NA	NA
ASF01930.1\|1041429_1041702_+	hypothetical protein	I6PCV7	Cronobacter_phage	5.5e-12	49.2
ASF01931.1\|1041703_1042750_+	DUF968 domain-containing protein	U5P0K4	Shigella_phage	5.9e-110	55.0
ASF01932.1\|1042762_1043137_+	hypothetical protein	V5URS4	Shigella_phage	5.8e-36	63.6
ASF01933.1\|1043133_1043955_+	antitermination protein	K7P7B9	Enterobacteria_phage	8.5e-80	60.1
ASF01934.1\|1044181_1044379_+	TrmB family transcriptional regulator	Q9MC00	Enterobacteria_phage	1.4e-28	96.9
ASF01935.1\|1044529_1045579_+	site-specific DNA-methyltransferase	A0A0N7KZF8	Stx2-converting_phage	8.8e-199	95.7
ASF01936.1\|1046015_1046342_+	hypothetical protein	NA	NA	NA	NA
AVL26749.1\|1046377_1046509_+	DUF3927 domain-containing protein	H6WZJ7	Escherichia_phage	1.1e-05	96.4
ASF01937.1\|1046789_1047125_-	anti-adapter protein IraM	Q8HAJ1	Enterobacteria_phage	5.2e-44	74.8
ASF01938.1\|1047385_1049239_+	9-O-acetyl-N-acetylneuraminic acid deacetylase	Q08JA2	Stx2-converting_phage	0.0e+00	90.5
1048247:1048261	attR	NA	NA	NA	NA
AVL26750.1\|1049389_1049605_+\|holin	holin	G9L6J5	Escherichia_phage	9.0e-34	100.0
ASF05791.1\|1049609_1050416_+	hypothetical protein	Q08JA0	Stx2-converting_phage	3.3e-145	94.8
ASF01939.1\|1050458_1050992_+	lysozyme	Q6H9V6	Enterobacteria_phage	8.7e-102	97.2
ASF01940.1\|1051069_1051282_+	hypothetical protein	A0A0M4S639	Salmonella_phage	2.7e-06	60.5
ASF05792.1\|1051546_1051633_+	hypothetical protein	NA	NA	NA	NA
ASF01941.1\|1051634_1052102_+\|lysis	lysis protein	Q9AZ06	Salmonella_phage	2.6e-62	81.5
ASF01942.1\|1052089_1052242_+	hypothetical protein	K7PKL2	Enterobacteria_phage	2.8e-21	98.0
ASF01943.1\|1052320_1052608_+	hypothetical protein	A0A1P8DTP0	Salmonella_phage	4.0e-29	58.9
ASF01944.1\|1052701_1052926_+	hypothetical protein	NA	NA	NA	NA
AVL26751.1\|1053061_1053466_+	hypothetical protein	NA	NA	NA	NA
ASF05793.1\|1053593_1053785_+	DNA-packaging protein	NA	NA	NA	NA
ASF01945.1\|1053866_1054415_+\|terminase	terminase small subunit	A0A0U2S671	Escherichia_phage	1.0e-57	84.2
AVL26752.1\|1054344_1056315_+\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	1.6e-262	67.5
ASF01946.1\|1056298_1056505_+\|tail	phage tail protein	K7PM10	Enterobacteria_phage	7.9e-11	56.9
ASF01947.1\|1056501_1058094_+\|portal	phage portal protein	K7P6U7	Enterobacteria_phage	3.8e-185	61.1
ASF01948.1\|1058083_1059589_+	S49 family peptidase	A0A2I6TC87	Escherichia_phage	3.0e-99	52.8
ASF01949.1\|1059625_1059973_+\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	8.9e-23	58.1
ASF01950.1\|1060030_1061059_+\|capsid	minor capsid protein E	C6ZCY2	Enterobacteria_phage	2.8e-112	60.4
ASF01951.1\|1061110_1061479_+	hypothetical protein	NA	NA	NA	NA
AVL26753.1\|1061471_1061825_+\|tail	phage tail protein	A0A0K2FJB7	Enterobacteria_phage	3.0e-42	70.1
ASF01952.1\|1061839_1062415_+\|tail	phage tail protein	A0A2R9YJK4	Escherichia_phage	9.2e-49	57.3
ASF01953.1\|1062411_1062807_+\|tail	phage tail protein	A0A2R9YJI2	Escherichia_phage	1.5e-58	82.4
ASF01954.1\|1062814_1063567_+\|tail	phage tail protein	Q687F6	Enterobacteria_phage	6.7e-132	97.6
ASF01955.1\|1063580_1064012_+\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	6.2e-42	68.8
ASF01956.1\|1064038_1064452_+\|tail	phage tail assembly protein T	S5MDP5	Escherichia_phage	1.6e-42	82.2
ASF01957.1\|1064432_1067006_+\|tail	phage tail tape measure protein	A0A2R9YJM8	Escherichia_phage	0.0e+00	83.9
ASF01958.1\|1067002_1067332_+\|tail	phage tail protein	A0A0K2FIE9	Enterobacteria_phage	9.6e-59	100.0
ASF01959.1\|1067331_1068030_+\|tail	phage minor tail protein L	A0A0K2FJ01	Enterobacteria_phage	3.4e-130	97.4
ASF01960.1\|1068034_1068778_+\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	1.8e-145	94.7
ASF01961.1\|1068675_1069317_+\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	8.6e-96	86.0
AVL26754.1\|1069449_1069635_-	hypothetical protein	NA	NA	NA	NA
ASF01962.1\|1069795_1073275_+	host specificity protein J	A5LH43	Enterobacteria_phage	0.0e+00	89.6
ASF01963.1\|1073342_1073942_+	Ail/Lom family protein	Q9EV15	Enterobacteria_phage	9.1e-108	97.0
ASF01964.1\|1074093_1076928_+\|tail	phage tail protein	X2KTY7	Enterobacteria_phage	5.7e-83	59.1
ASF01965.1\|1076927_1077512_+\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	1.7e-103	95.4
ASF01966.1\|1077484_1077622_+\|capsid	nucleocapsid protein	NA	NA	NA	NA
ASF05794.2\|1077566_1078193_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
ASF01967.1\|1078291_1078561_+\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	2.7e-19	77.8
ASF01969.1\|1079334_1079841_-	ferritin-like domain-containing protein	NA	NA	NA	NA
ASF01970.1\|1079886_1080387_-	YciE/YciF family protein	NA	NA	NA	NA
ASF01971.1\|1080472_1080652_-	hypothetical protein	NA	NA	NA	NA
ASF01972.1\|1081032_1081839_-	tryptophan synthase subunit alpha	NA	NA	NA	NA
ASF01973.1\|1081838_1083032_-	tryptophan synthase subunit beta	NA	NA	NA	NA
ASF05795.1\|1083043_1084402_-	bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF	A0A0P0IR83	Acinetobacter_phage	8.6e-37	40.7
ASF01974.1\|1084405_1086001_-	bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase	A0A0N7IRD9	Acinetobacter_phage	3.8e-52	38.5
ASF01975.1\|1086000_1087563_-	anthranilate synthase component I	NA	NA	NA	NA
AVL26901.1\|1087654_1087699_-	trp operon leader peptide	NA	NA	NA	NA
ASF01976.1\|1087836_1088718_+	phosphatase	NA	NA	NA	NA
ASF01977.1\|1088714_1089335_+	threonylcarbamoyl-AMP synthase	NA	NA	NA	NA
ASF01978.1\|1089435_1090308_+	23S rRNA pseudouridylate synthase B	NA	NA	NA	NA
ASF01979.1\|1090347_1090938_-	cob(I)yrinic acid a,c-diamide adenosyltransferase	NA	NA	NA	NA
ASF01980.1\|1090934_1091693_-	YciK family oxidoreductase	A0A0N9R355	Chrysochromulina_ericina_virus	8.8e-07	23.4
ASF01981.1\|1091912_1092962_+\|protease	protease	A0A2H4UUF9	Bodo_saltans_virus	1.3e-21	31.5

DBSCAN-SWA_4

1382785 : 1449757

Escherichia_phage(43.42%)

bacteriocin,portal,terminase,capsid,lysis,tail,integrase,holin

attL 1425248:1425265|attR 1453298:1453315

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
ASF02234.1\|1382785_1385212_+	dimethyl sulfoxide reductase subunit A	A0A077SK27	Escherichia_phage	2.3e-213	49.1
ASF05805.1\|1385272_1387696_+	dimethyl sulfoxide reductase subunit A	A0A077SK27	Escherichia_phage	9.8e-209	48.6
ASF02235.1\|1387706_1387820_+	dimethylsulfoxide reductase	A0A077SL61	Escherichia_phage	2.1e-05	72.0
ASF02236.1\|1388227_1388863_+	phage antirepressor Ant	A0A088CBR4	Shigella_phage	2.8e-91	81.0
ASF02237.1\|1388910_1389132_+	conjugal transfer protein TraR	V5USD3	Shigella_phage	2.9e-35	98.6
ASF02238.1\|1389128_1389413_+	DUF4752 domain-containing protein	A0A088CD82	Shigella_phage	6.1e-46	98.9
ASF02239.1\|1389399_1390236_+	hypothetical protein	A0A2I6TD51	Escherichia_phage	6.1e-126	87.7
ASF05806.1\|1390465_1390753_+	hypothetical protein	A0A0P0ZBM8	Stx2-converting_phage	9.5e-55	100.0
ASF02240.1\|1390749_1391253_+	DUF551 domain-containing protein	V5UT79	Shigella_phage	2.6e-95	98.2
ASF02241.1\|1391254_1391530_-	hypothetical protein	A0A088CD78	Shigella_phage	4.0e-18	89.3
ASF02242.1\|1391653_1400005_-	hypothetical protein	Q08J70	Stx2-converting_phage	0.0e+00	95.8
ASF02243.1\|1400073_1401339_-	hypothetical protein	A0A2L1IV65	Escherichia_phage	1.5e-192	95.0
ASF02244.1\|1401349_1401601_-\|bacteriocin	bacteriocin	A0A0P0ZDW9	Stx2-converting_phage	7.9e-13	97.5
ASF02245.1\|1401610_1402057_-	hypothetical protein	A0A2L1IV89	Escherichia_phage	4.0e-76	100.0
ASF02246.1\|1402059_1402716_-	hypothetical protein	A0A0H4IPM7	Shigella_phage	7.4e-103	99.1
ASF02247.1\|1402807_1403209_-	hypothetical protein	Q08J75	Stx2-converting_phage	5.0e-70	98.5
ASF02248.1\|1403265_1403406_-	Hok/Gef family protein	A0A2R2X2B4	Escherichia_phage	2.0e-18	97.8
ASF02249.1\|1403485_1403710_+	hypothetical protein	Q7Y2U2	Escherichia_phage	5.4e-21	78.8
AVL26761.1\|1403640_1404378_-	hypothetical protein	A0A2L1IV31	Escherichia_phage	1.2e-109	80.8
ASF02250.1\|1404457_1405075_-	hypothetical protein	A0A2L1IV83	Escherichia_phage	6.3e-120	98.0
ASF02251.1\|1405080_1405359_-	outer membrane protein	A0A2L1IV69	Escherichia_phage	2.6e-49	100.0
ASF02252.1\|1405373_1406642_-	host specificity protein J	A0A0N7C124	Escherichia_phage	1.6e-218	94.3
AVL26762.1\|1406638_1408264_-	hypothetical protein	A0A1I9LJT3	Stx_converting_phage	0.0e+00	96.7
ASF02253.1\|1408604_1408832_-	hypothetical protein	A0A088CBQ7	Shigella_phage	2.6e-39	98.7
ASF02254.1\|1408844_1409390_-	hypothetical protein	A0A088CD67	Shigella_phage	2.0e-93	99.4
ASF02255.1\|1409472_1411380_-\|tail	phage tail protein	V5USF3	Shigella_phage	4.2e-82	66.0
ASF02256.1\|1411376_1412027_-	hypothetical protein	A0A2L1IV63	Escherichia_phage	1.5e-119	99.1
ASF02257.1\|1412026_1412590_-	hypothetical protein	A0A2L1IV64	Escherichia_phage	8.3e-103	99.5
ASF02258.1\|1412573_1413035_-	hypothetical protein	A0A2L1IV43	Escherichia_phage	6.9e-71	99.3
ASF02259.1\|1413085_1413475_-	hypothetical protein	V5UT93	Shigella_phage	1.9e-61	97.7
AVL26763.1\|1413529_1414744_-\|capsid	N4-gp56 family major capsid protein	A0A2L1IV46	Escherichia_phage	1.8e-232	99.0
AVL26764.1\|1414766_1415774_-	hypothetical protein	A0A2L1IV47	Escherichia_phage	1.2e-168	93.4
ASF02260.1\|1415931_1418076_-\|portal	portal protein	A0A088CE71	Shigella_phage	0.0e+00	99.6
ASF02261.1\|1418075_1419782_-\|terminase	terminase	A0A2L1IV76	Escherichia_phage	0.0e+00	99.1
ASF02262.1\|1419762_1420578_-\|terminase	terminase	A0A2L1IV66	Escherichia_phage	6.6e-125	99.6
ASF02263.2\|1421180_1421762_+	histidine phosphatase family protein	A0A2L1IV13	Escherichia_phage	6.7e-47	100.0
ASF05808.1\|1421895_1422081_-\|lysis	lysis protein	A0A0P0ZDR7	Stx2-converting_phage	2.8e-23	96.7
ASF02264.1\|1422302_1422416_-	hypothetical protein	A0A2L1IV24	Escherichia_phage	6.6e-12	100.0
ASF02265.1\|1422636_1423170_-	lysozyme	A0A088CC28	Shigella_phage	5.6e-93	91.5
ASF02266.1\|1423174_1423390_-\|holin	holin	Q9ZWW2	Enterobacteria_phage	6.9e-34	100.0
ASF02267.1\|1423466_1423712_-	DUF826 domain-containing protein	S5MW40	Escherichia_phage	1.1e-14	87.7
ASF02268.1\|1423737_1423920_-	DUF1378 domain-containing protein	S5MBZ5	Escherichia_phage	1.6e-23	91.7
ASF02269.1\|1424058_1425969_-	DUF1737 domain-containing protein	A0A0N7CGH9	Escherichia_phage	6.4e-280	74.8
1425248:1425265	attL	NA	NA	NA	NA
ASF02270.1\|1426500_1426746_+	hypothetical protein	Q7Y2J1	Escherichia_phage	1.3e-31	93.8
AVL26765.1\|1426734_1427169_-	antitermination protein	G9L695	Escherichia_phage	2.4e-81	98.6
ASF02271.1\|1427161_1427356_-	protein ninH	A0A088CC23	Shigella_phage	1.4e-30	100.0
ASF02272.1\|1427355_1427718_-	hypothetical protein	A0A088CBJ1	Shigella_phage	9.2e-63	98.3
ASF02273.1\|1427714_1428005_-	DUF1364 domain-containing protein	A0A088CE53	Shigella_phage	9.3e-50	96.9
ASF02274.1\|1428028_1428220_-	NinE family protein	A0A0P0ZDL7	Stx2-converting_phage	8.9e-25	87.7
ASF02275.1\|1428216_1428627_-	recombination protein NinB	A0A088CBP6	Shigella_phage	3.9e-70	98.5
ASF02276.1\|1428681_1429353_-	hypothetical protein	A0A088CD42	Shigella_phage	9.0e-96	82.6
ASF02277.1\|1430059_1430377_+	transcriptional regulator	NA	NA	NA	NA
ASF02278.1\|1430427_1430913_-	type II toxin-antitoxin system death-on-curing family toxin	NA	NA	NA	NA
ASF02279.1\|1430931_1431111_-	hypothetical protein	NA	NA	NA	NA
ASF02280.1\|1431320_1431533_-	Hok/Gef family protein	A0A0U2QV81	Escherichia_phage	8.4e-16	62.9
ASF02281.1\|1431577_1431733_+	hypothetical protein	Q7Y2Q9	Escherichia_phage	4.2e-09	81.1
ASF02282.1\|1431721_1431826_-	hypothetical protein	NA	NA	NA	NA
ASF02283.1\|1431941_1432526_-	DUF551 domain-containing protein	A0A0P0ZD75	Stx2-converting_phage	5.5e-33	83.5
ASF02284.1\|1432582_1432978_-	DUF977 domain-containing protein	A0A0U2QQN3	Escherichia_phage	2.0e-31	52.9
ASF02285.1\|1432993_1433764_-	DUF1627 domain-containing protein	A0A088CE47	Shigella_phage	8.1e-109	82.4
ASF02286.1\|1433789_1434530_-	DNA replication protein DnaC	A0A088CBP4	Shigella_phage	2.3e-121	87.4
ASF02287.1\|1434536_1435619_-	DNA-binding protein	V5URT9	Shigella_phage	2.8e-200	96.4
ASF02288.1\|1435639_1435858_-	hypothetical protein	A0A088CC17	Shigella_phage	1.1e-21	100.0
ASF02289.1\|1435872_1436169_-	hypothetical protein	A0A088CBI6	Shigella_phage	3.4e-47	98.0
ASF02290.1\|1436307_1436508_-	hypothetical protein	A4KWT7	Enterobacteria_phage	1.3e-29	97.0
ASF02291.1\|1436608_1437322_+	LexA family transcriptional repressor	A4KWV9	Enterobacteria_phage	4.1e-131	99.6
ASF02292.1\|1437368_1437911_+	hypothetical protein	NA	NA	NA	NA
ASF02293.1\|1437898_1438675_+	DUF1828 domain-containing protein	NA	NA	NA	NA
ASF02294.1\|1439169_1439553_+	antitermination protein	G9L671	Escherichia_phage	6.7e-64	99.2
AVL26766.1\|1439964_1440270_+	hypothetical protein	A0A088CC14	Shigella_phage	2.5e-45	98.0
ASF02296.1\|1440301_1440661_+	hypothetical protein	A0A088CBI5	Shigella_phage	2.3e-37	72.6
ASF02297.1\|1440629_1440839_-	hypothetical protein	NA	NA	NA	NA
ASF02298.1\|1441295_1441517_+	cell division protein FtsZ	A0A0U2RTC4	Escherichia_phage	1.1e-34	94.4
ASF02299.1\|1441600_1441987_+	hypothetical protein	V5USC5	Shigella_phage	9.5e-50	78.9
ASF02300.1\|1442094_1444167_+	exodeoxyribonuclease VIII	V5UQJ3	Shigella_phage	0.0e+00	87.4
ASF02301.1\|1444163_1444460_+	host-nuclease inhibitor protein Gam	V5URU8	Shigella_phage	5.8e-47	93.9
ASF02302.1\|1444465_1445251_+	phage recombination protein Bet	A0A088CBI3	Shigella_phage	9.4e-145	97.3
ASF02303.1\|1445247_1445928_+	exonuclease	A0A0P0ZBV6	Stx2-converting_phage	1.5e-130	98.2
ASF02304.1\|1445975_1446227_+	DUF4222 domain-containing protein	A0A088CBN9	Shigella_phage	1.3e-39	100.0
ASF02305.1\|1446261_1446633_+	DNA-binding protein	B9UDM0	Salmonella_phage	7.8e-41	74.8
ASF02306.1\|1446488_1447652_+\|integrase	site-specific integrase	A0A088CD23	Shigella_phage	3.8e-227	99.7
ASF02307.1\|1447689_1448244_+	dimethylsulfoxide reductase, chain B	A0A077SL61	Escherichia_phage	1.4e-62	57.7
ASF02308.1\|1448245_1449100_+	dimethyl sulfoxide reductase anchor subunit	NA	NA	NA	NA
ASF02309.1\|1449142_1449757_+	Tat proofreading chaperone DmsD	A0A077SLS7	Escherichia_phage	8.7e-29	36.3
1453298:1453315	attR	NA	NA	NA	NA

DBSCAN-SWA_5

1577162 : 1623539

Enterobacteria_phage(82.61%)

portal,terminase,capsid,tail,plate,integrase,tRNA,holin

attL 1573155:1573171|attR 1624163:1624179

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1573155:1573171	attL	NA	NA	NA	NA
ASF02425.1\|1577162_1577912_-	vitamin B12 import ATP-binding protein BtuD	A0A2R8FG22	Brazilian_cedratvirus	9.3e-09	28.2
ASF02426.1\|1577911_1578463_-	glutathione peroxidase	NA	NA	NA	NA
ASF02427.1\|1578525_1579506_-	vitamin B12 import system permease BtuC	NA	NA	NA	NA
ASF02428.1\|1579695_1580091_-	hypothetical protein	NA	NA	NA	NA
ASF02429.1\|1580101_1581037_-\|integrase	integrase	A0A0M4RTQ0	Salmonella_phage	4.8e-79	50.5
ASF02430.1\|1581125_1581437_-	XRE family transcriptional regulator	Q1JS45	Enterobacteria_phage	8.8e-22	55.9
ASF02431.1\|1581528_1581807_+	DNA-binding protein	NA	NA	NA	NA
ASF02432.1\|1581821_1582160_+	DUF4761 domain-containing protein	A0A0A7NV42	Enterobacteria_phage	2.2e-50	85.3
ASF02433.1\|1582170_1582458_+	hypothetical protein	A0A0A7NRX5	Enterobacteria_phage	2.7e-33	77.9
ASF02434.1\|1582469_1582712_+	DUF4754 domain-containing protein	A0A0A7NQ71	Enterobacteria_phage	2.3e-38	100.0
ASF02435.1\|1582910_1583231_+	hypothetical protein	NA	NA	NA	NA
ASF02436.1\|1583220_1583424_+	hypothetical protein	A0A0A7NPS8	Enterobacteria_phage	3.4e-30	94.0
ASF02437.1\|1583420_1583666_+	MarR family transcriptional regulator	A0A0A7NV47	Enterobacteria_phage	8.4e-36	87.7
ASF02438.1\|1583662_1583962_+	hypothetical protein	A0A0A7NRX6	Enterobacteria_phage	6.2e-41	88.9
ASF02439.1\|1584284_1584515_+	derepression protein	A0A0A7NV48	Enterobacteria_phage	5.0e-30	93.4
ASF02440.1\|1584587_1584977_+	inositol monophosphatase	NA	NA	NA	NA
ASF02441.1\|1584973_1587814_+	replication endonuclease	A0A0A7NQ77	Enterobacteria_phage	0.0e+00	89.4
ASF02442.1\|1587890_1588850_+	recombinase	A0A0A7NPX4	Enterobacteria_phage	1.3e-180	99.4
ASF02443.1\|1588854_1589169_+	peptide transporter	A0A0A7NPT5	Enterobacteria_phage	3.5e-18	51.9
ASF02444.1\|1589188_1589620_+	hypothetical protein	A0A0A7NRY2	Enterobacteria_phage	4.7e-21	43.3
ASF02445.1\|1589621_1589885_+	hypothetical protein	A0A2P0P958	Salmonella_phage	1.1e-30	72.4
AVL26902.1\|1589907_1590252_-	hypothetical protein	NA	NA	NA	NA
ASF02446.1\|1590396_1591443_-\|portal	phage portal protein	A0A0A7NPT9	Enterobacteria_phage	1.5e-206	100.0
AVL26773.1\|1591442_1593194_-	oxidoreductase	A0A0A7NV54	Enterobacteria_phage	0.0e+00	97.6
ASF02447.1\|1593348_1594185_+\|capsid	phage capsid protein	A0A0A7NRY7	Enterobacteria_phage	1.8e-149	99.3
ASF02448.1\|1594208_1595261_+\|capsid	phage major capsid protein, P2 family	A0A0A7NQ82	Enterobacteria_phage	3.2e-188	94.3
ASF02449.1\|1595306_1596107_+\|terminase	terminase	A0A0A7NPX9	Enterobacteria_phage	6.6e-130	91.4
ASF02450.1\|1596208_1596703_+\|capsid	capsid assembly protein	A0A0A7NPU2	Enterobacteria_phage	1.2e-89	99.4
ASF02451.1\|1596702_1596903_+\|tail	phage tail protein	A0A0A7NV57	Enterobacteria_phage	6.0e-32	98.5
ASF02452.1\|1596905_1597229_+\|holin	holin	A0A0A7NRY9	Enterobacteria_phage	1.6e-50	99.1
ASF02453.1\|1597225_1597618_+	peptidase M15	A0A0A7NQ86	Enterobacteria_phage	6.4e-70	97.7
ASF02454.1\|1597614_1598022_+	DUF2570 domain-containing protein	A0A0A7NPY2	Enterobacteria_phage	1.2e-63	95.6
AVL26774.1\|1598160_1600041_+	DUF1737 domain-containing protein	H6WZJ9	Escherichia_phage	3.8e-301	81.0
ASF02455.1\|1600064_1600532_+\|tail	phage tail protein	A0A0A7NPU6	Enterobacteria_phage	2.1e-83	96.1
ASF02456.1\|1600524_1601160_+	phage virion morphogenesis protein	A0A0A7NV60	Enterobacteria_phage	5.3e-114	99.5
ASF02457.1\|1601156_1601738_+\|plate	phage baseplate assembly protein V	A0A0A7NRZ3	Enterobacteria_phage	1.2e-101	97.4
ASF02458.1\|1601734_1602085_+\|plate	baseplate assembly protein	A0A0A7NQ90	Enterobacteria_phage	9.2e-60	100.0
ASF02459.1\|1602088_1602985_+\|plate	baseplate assembly protein	A0A0A7NPY5	Enterobacteria_phage	5.7e-154	97.3
ASF02460.1\|1602977_1603508_+\|tail	phage tail protein I	A0A0A7NPV1	Enterobacteria_phage	1.1e-93	99.4
ASF02461.1\|1603510_1605643_+\|tail	phage tail protein	U5N099	Enterobacteria_phage	1.2e-130	66.4
ASF02462.1\|1605642_1606221_+\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	7.7e-96	89.0
ASF05813.1\|1606264_1606741_-	serine acetyltransferase	NA	NA	NA	NA
ASF02463.1\|1606993_1607488_-\|tail	phage tail protein	A0A0A7NV65	Enterobacteria_phage	5.2e-85	98.8
ASF02464.1\|1607494_1610302_-\|tail	phage tail tape measure protein	A0A0A7NRZ9	Enterobacteria_phage	0.0e+00	92.5
ASF02465.1\|1610288_1610525_-\|tail	GpE family phage tail protein	A0A0A7NQ96	Enterobacteria_phage	1.9e-21	96.1
ASF02466.1\|1610452_1610818_-\|tail	phage tail protein	A0A0A7NPZ0	Enterobacteria_phage	1.4e-55	96.7
AVL26775.1\|1610872_1611385_-\|tail	phage major tail tube protein	A0A0A7NPV8	Enterobacteria_phage	2.7e-92	98.8
ASF02467.1\|1611384_1612569_-\|tail	phage tail sheath family protein	A0A0A7NV69	Enterobacteria_phage	3.8e-222	98.0
ASF02468.1\|1612726_1613836_+	late control protein	A0A0A7NQ97	Enterobacteria_phage	3.7e-195	94.8
ASF05814.1\|1613927_1615010_-	hypothetical protein	NA	NA	NA	NA
ASF02469.1\|1615329_1615590_+	hypothetical protein	NA	NA	NA	NA
ASF02470.1\|1615780_1615921_+	Hok/Gef family protein	A0A0A7NPZ4	Enterobacteria_phage	1.5e-18	97.8
ASF02471.1\|1616222_1616522_-	integration host factor subunit alpha	A0A0H3UZA0	Geobacillus_virus	7.2e-13	40.0
ASF02472.1\|1616526_1618914_-\|tRNA	phenylalanine--tRNA ligase subunit beta	NA	NA	NA	NA
ASF02473.1\|1618928_1619912_-\|tRNA	phenylalanine--tRNA ligase subunit alpha	A0A2K9L3A8	Tupanvirus	1.1e-33	38.5
AVL26903.1\|1620194_1620239_-\|tRNA	phenylalanyl--tRNA ligase operon leader peptide	NA	NA	NA	NA
ASF02474.1\|1620361_1620718_-	50S ribosomal protein L20	NA	NA	NA	NA
ASF02475.1\|1620770_1620968_-	50S ribosomal protein L35	NA	NA	NA	NA
ASF02476.1\|1621064_1621607_-	translation initiation factor IF-3	A0A2L0UZ54	Agrobacterium_phage	6.3e-15	32.9
ASF02477.1\|1621610_1623539_-\|tRNA	threonine--tRNA ligase	A0A2K9L297	Tupanvirus	5.5e-130	37.3
1624163:1624179	attR	NA	NA	NA	NA

DBSCAN-SWA_6

1735642 : 1827005

112

Enterobacteria_phage(44.44%)

protease,head,portal,terminase,capsid,lysis,tail,integrase,tRNA,holin

attL 1755515:1755530|attR 1832325:1832340

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
ASF02591.1\|1735642_1736524_-\|protease	protease HtpX	NA	NA	NA	NA
ASF02592.1\|1736715_1738764_-	carboxy terminal-processing peptidase	A0A0R6PIZ1	Moraxella_phage	6.8e-86	33.5
ASF02593.1\|1738783_1739482_-	RNA chaperone ProQ	NA	NA	NA	NA
ASF02594.1\|1739578_1740076_-	GAF domain-containing protein	NA	NA	NA	NA
ASF02595.1\|1740205_1741489_+	paraquat-inducible membrane protein A	NA	NA	NA	NA
ASF02596.1\|1741457_1744091_+	MCE family protein	NA	NA	NA	NA
ASF05820.1\|1744170_1745610_+	16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF	NA	NA	NA	NA
ASF02597.1\|1745727_1745964_+	DUF1480 domain-containing protein	NA	NA	NA	NA
ASF05821.1\|1746068_1746260_+	DUF1482 domain-containing protein	NA	NA	NA	NA
ASF02598.1\|1746260_1746917_-	protein-serine/threonine phosphatase	A0A222YWF0	Escherichia_phage	3.6e-57	50.7
ASF02599.1\|1747312_1747654_-	DUF2511 domain-containing protein	NA	NA	NA	NA
ASF02600.1\|1747666_1748539_-	copper resistance protein D	NA	NA	NA	NA
ASF02601.1\|1748542_1748917_-	CopC domain-containing protein YobA	NA	NA	NA	NA
ASF02602.1\|1749055_1749286_+	DNA polymerase III subunit theta	H9C187	Pectobacterium_phage	1.3e-14	61.8
ASF02603.1\|1749387_1750044_+	carbon-nitrogen hydrolase family protein	NA	NA	NA	NA
ASF02604.1\|1750067_1750730_+	DNA polymerase III subunit epsilon	Q6UAU3	Klebsiella_phage	2.0e-07	41.6
ASF02605.1\|1750726_1752787_-	oligopeptidase B	NA	NA	NA	NA
ASF02607.1\|1752995_1753655_-	DUF533 domain-containing protein	NA	NA	NA	NA
ASF02608.1\|1753981_1754338_-	protein YebF	NA	NA	NA	NA
ASF02609.1\|1754404_1754695_-	damage-inducible protein YebG	NA	NA	NA	NA
ASF02610.1\|1754828_1756007_+	phosphoribosylglycinamide formyltransferase 2	NA	NA	NA	NA
1755515:1755530	attL	NA	NA	NA	NA
ASF02611.1\|1756062_1756704_-	KHG/KDPG aldolase	NA	NA	NA	NA
ASF02612.1\|1756740_1758552_-	phosphogluconate dehydratase	NA	NA	NA	NA
ASF02613.1\|1758786_1760262_-	glucose-6-phosphate dehydrogenase	H6WFS4	Cyanophage	9.9e-79	37.3
ASF02614.1\|1760599_1761469_+	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
ASF02615.1\|1761596_1763039_+	pyruvate kinase	NA	NA	NA	NA
ASF05822.2\|1763169_1764141_-	lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase	NA	NA	NA	NA
ASF02616.1\|1764260_1765583_-	murein DD-endopeptidase MepM	A8ATH6	Listeria_phage	1.2e-14	40.9
ASF05823.1\|1765598_1766531_-	zinc ABC transporter substrate-binding protein ZnuA	NA	NA	NA	NA
ASF02617.1\|1766609_1767365_+	Mn2+/Zn2+ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.3e-18	28.3
ASF02618.1\|1767361_1768147_+	zinc ABC transporter permease subunit ZnuB	NA	NA	NA	NA
ASF02619.1\|1768293_1769304_-	Holliday junction branch migration DNA helicase RuvB	A0A127AWE7	Bacillus_phage	5.6e-09	25.5
ASF02620.1\|1769312_1769924_-	Holliday junction branch migration protein RuvA	NA	NA	NA	NA
ASF05824.1\|1770062_1770128_-	hypothetical protein	NA	NA	NA	NA
ASF02621.1\|1770198_1770801_+	hypothetical protein	NA	NA	NA	NA
ASF02622.1\|1770802_1771324_-	crossover junction endodeoxyribonuclease RuvC	G3MA90	Bacillus_virus	2.0e-10	35.1
ASF02623.1\|1771358_1772099_-	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA
ASF02624.1\|1772127_1772580_-	dihydroneopterin triphosphate diphosphatase	NA	NA	NA	NA
ASF02625.1\|1772572_1774345_-\|tRNA	aspartate--tRNA ligase	NA	NA	NA	NA
ASF02626.1\|1774654_1775221_+	hydrolase	NA	NA	NA	NA
ASF05825.1\|1775302_1775419_-	preprotein translocase subunit SecY	NA	NA	NA	NA
ASF02627.1\|1775575_1775824_+	damage-inducible protein DinI	K7PLW4	Enterobacteria_phage	1.8e-38	100.0
ASF02628.2\|1775820_1775967_-\|capsid	nucleocapsid protein	NA	NA	NA	NA
ASF02629.1\|1775939_1776524_-\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	4.3e-102	94.3
ASF02630.1\|1776523_1779694_-\|tail	phage tail protein	X2KTY7	Enterobacteria_phage	1.3e-83	59.1
ASF02631.1\|1779845_1780445_-	Ail/Lom family protein	Q9EV15	Enterobacteria_phage	1.0e-106	95.5
AVL26779.1\|1780512_1783992_-	host specificity protein J	A0A291AWT4	Escherichia_phage	0.0e+00	90.0
ASF02632.1\|1784052_1784724_-\|tail	tail assembly protein	A0A2R9YJH6	Escherichia_phage	3.1e-104	99.6
ASF02633.1\|1784621_1785365_-\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	2.5e-147	96.8
ASF02634.1\|1785369_1786068_-\|tail	phage minor tail protein L	A0A0K2FJ01	Enterobacteria_phage	2.8e-132	98.7
ASF02635.1\|1786067_1786397_-\|tail	phage tail protein	A0A0K2FIE9	Enterobacteria_phage	9.6e-59	100.0
ASF02636.1\|1786393_1788955_-\|tail	phage tail tape measure protein	A0A0K2FI43	Enterobacteria_phage	0.0e+00	99.6
ASF02637.1\|1788947_1789382_-\|tail	phage tail assembly protein T	A0A0K2FJB3	Enterobacteria_phage	1.7e-63	98.3
ASF02638.1\|1789363_1789786_-\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	6.7e-73	100.0
ASF05826.1\|1789801_1790542_-\|tail	phage tail protein	A0A0K2FJ05	Enterobacteria_phage	5.0e-132	99.2
ASF02639.1\|1790549_1790945_-\|tail	phage tail protein	A0A0K2FIF4	Enterobacteria_phage	2.2e-70	99.2
AVL26780.1\|1790941_1791520_-\|tail	phage tail protein	A0A2R9YJK4	Escherichia_phage	4.9e-74	90.6
ASF02640.1\|1791535_1791889_-\|tail	phage tail protein	A0A0K2FJB7	Enterobacteria_phage	1.9e-41	70.1
AVL26781.1\|1791881_1792250_-	hypothetical protein	NA	NA	NA	NA
ASF02641.1\|1792302_1793331_-\|capsid	minor capsid protein E	C6ZCY2	Enterobacteria_phage	1.1e-113	61.0
ASF02642.1\|1793388_1793736_-\|head	head decoration protein	C6ZCY1	Enterobacteria_phage	4.4e-22	57.0
ASF02643.1\|1793772_1795278_-	S49 family peptidase	A0A2I6TC87	Escherichia_phage	1.2e-100	54.0
ASF02644.1\|1795267_1796860_-\|portal	phage portal protein	K7P6U7	Enterobacteria_phage	4.2e-184	60.5
ASF02645.1\|1796856_1797063_-\|tail	phage tail protein	K7PM10	Enterobacteria_phage	7.9e-11	56.9
AVL26782.1\|1797046_1798975_-\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	7.4e-260	66.6
ASF02646.1\|1798946_1799495_-\|terminase	phage terminase small subunit	A0A0U2S671	Escherichia_phage	1.0e-57	84.2
ASF02647.1\|1799889_1800075_+	DUF3950 domain-containing protein	A0A0K2FIR8	Escherichia_phage	4.1e-19	81.4
ASF02648.1\|1800207_1800348_-	hypothetical protein	NA	NA	NA	NA
ASF02649.1\|1800698_1801166_-\|lysis	lysis protein	Q9ZXB6	Enterobacteria_phage	3.4e-78	99.4
ASF02650.1\|1801464_1801998_-	lysozyme	Q6H9V6	Enterobacteria_phage	4.8e-100	95.5
ASF02651.1\|1802048_1802393_-	DUF1327 domain-containing protein	A0A0P0ZD64	Stx2-converting_phage	7.2e-57	97.4
ASF02652.1\|1802397_1802613_-\|holin	holin	G9L6J5	Escherichia_phage	9.0e-34	100.0
ASF02653.1\|1802688_1802958_-	DUF826 domain-containing protein	A0A2R2Z348	Escherichia_phage	8.2e-08	74.2
ASF02654.1\|1802983_1803178_-	DUF1378 domain-containing protein	S5MBZ5	Escherichia_phage	9.4e-22	86.7
ASF02655.1\|1803313_1805275_-	DUF1737 domain-containing protein	A0A0P0ZBH7	Stx2-converting_phage	3.9e-240	64.2
ASF02656.1\|1805392_1805596_+	hypothetical protein	Q8VNP0	Enterobacteria_phage	1.8e-28	96.7
ASF02657.2\|1806041_1806755_-	AraC family transcriptional regulator	NA	NA	NA	NA
ASF02658.1\|1806889_1807087_-	TrmB family transcriptional regulator	S5MQK8	Escherichia_phage	3.4e-27	95.4
AVL26783.1\|1807353_1808529_+	hypothetical protein	NA	NA	NA	NA
ASF02660.1\|1808531_1809746_+	hypothetical protein	NA	NA	NA	NA
ASF02661.1\|1809725_1810082_-	antitermination protein	A0A0P0ZCW0	Stx2-converting_phage	2.3e-58	92.0
ASF02662.2\|1810099_1811089_-	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	4.7e-194	99.4
ASF02663.1\|1811096_1811912_-	KilA-N domain-containing protein	U5P4K5	Shigella_phage	8.5e-149	99.3
ASF02664.1\|1812074_1812470_-	hypothetical protein	A0A0P0ZD39	Stx2-converting_phage	5.7e-66	98.4
ASF02665.1\|1812466_1812793_-	LexA family transcriptional regulator	A0A291AWY9	Escherichia_phage	2.7e-53	98.1
ASF02666.1\|1812789_1813443_-	phage N-6-adenine-methyltransferase	A5LH72	Enterobacteria_phage	1.9e-127	99.5
ASF02667.1\|1813442_1813937_-	PerC family transcriptional regulator	A0A291AWV6	Escherichia_phage	1.5e-84	96.3
ASF02668.1\|1813933_1814752_-	helix-turn-helix domain-containing protein	A5LH71	Enterobacteria_phage	2.8e-123	88.1
ASF02669.1\|1814748_1814973_-	hypothetical protein	A5LH70	Enterobacteria_phage	2.4e-37	95.9
ASF02670.1\|1814969_1816115_-	peptidase	A5LH69	Enterobacteria_phage	3.1e-173	83.5
ASF02671.1\|1816111_1816669_-	hypothetical protein	Q8SBF4	Shigella_phage	5.3e-94	94.1
ASF02672.1\|1816661_1816922_-	XRE family transcriptional regulator	K7PJQ8	Enterobacteria_phage	5.4e-41	100.0
ASF02673.1\|1816893_1817046_-	amino acid permease	NA	NA	NA	NA
ASF02674.1\|1817019_1817712_+	XRE family transcriptional regulator	S5FUZ3	Shigella_phage	6.4e-121	96.1
ASF02675.1\|1817791_1818046_+	hypothetical protein	A0A291AWY6	Escherichia_phage	2.7e-13	97.4
AVL26784.1\|1818147_1818342_-	hypothetical protein	A0A291AWX8	Escherichia_phage	7.1e-30	96.9
ASF02676.1\|1818414_1818777_+	hypothetical protein	Q8SBF8	Shigella_phage	7.5e-57	94.2
ASF02677.1\|1818842_1819667_+	hypothetical protein	K7PJQ6	Enterobacteria_phage	1.1e-148	98.9
ASF02678.1\|1819794_1820331_+	HD family hydrolase	A0A0P0ZCH9	Stx2-converting_phage	2.2e-100	99.4
ASF02679.1\|1820321_1820684_+	hypothetical protein	K7PH61	Enterobacteria_phage	6.8e-66	97.5
ASF02680.1\|1820680_1820884_+	hypothetical protein	K7PLX1	Enterobacteria_phage	1.0e-31	98.5
ASF02681.1\|1820876_1821116_+	hypothetical protein	S5MQM0	Escherichia_phage	9.1e-35	96.2
ASF02682.1\|1821112_1821661_+	hypothetical protein	A0A1I9LJM5	Stx_converting_phage	1.4e-59	97.5
ASF05827.1\|1821890_1822178_+	hypothetical protein	G9L6B3	Escherichia_phage	1.4e-53	97.9
ASF02683.1\|1822174_1822933_+	dTDP-6-deoxy-L-hexose 3-O-methyltransferase	A0A1U9AJ59	Stx1_converting_phage	2.7e-109	82.0
ASF02684.1\|1823017_1823260_+	DUF4222 domain-containing protein	Q6H9Z8	Enterobacteria_phage	4.3e-32	87.5
ASF02685.1\|1823263_1823410_+	hypothetical protein	A0A1B5FPC2	Escherichia_phage	1.6e-21	93.8
ASF02686.1\|1823418_1823655_+	excisionase	Q8W657	Enterobacteria_phage	6.4e-41	100.0
ASF02687.1\|1823710_1825021_+\|integrase	integrase	Q8W658	Enterobacteria_phage	3.0e-244	95.4
ASF02688.2\|1825002_1825773_+	DUF72 domain-containing protein	Q859D1	Escherichia_coli_phage	6.1e-72	99.2
ASF02689.1\|1825825_1826221_+	hypothetical protein	NA	NA	NA	NA
ASF02690.1\|1826261_1827005_+	carboxy-S-adenosyl-L-methionine synthase CmoA	F5B419	Synechococcus_phage	4.6e-24	30.0
1832325:1832340	attR	NA	NA	NA	NA

DBSCAN-SWA_7

2127990 : 2137432

Enterobacteria_phage(85.71%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
ASF02950.1\|2127990_2129127_+	VWA domain-containing protein	Q9EYF7	Enterobacteria_phage	4.6e-161	97.1
ASF02951.1\|2129123_2131124_+	hypothetical protein	Q9EYF6	Enterobacteria_phage	0.0e+00	96.3
ASF02952.1\|2131248_2131710_+	hypothetical protein	Q9EYF5	Enterobacteria_phage	1.9e-76	100.0
ASF02953.1\|2131750_2132221_-	DUF1456 domain-containing protein	Q9EYF4	Enterobacteria_phage	1.8e-82	100.0
ASF02954.1\|2132267_2132987_-	DNA-binding response regulator	NA	NA	NA	NA
ASF02955.1\|2132983_2134669_-	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	2.5e-304	99.6
ASF02956.1\|2134890_2135622_+	transcriptional regulator	Q9EYF2	Enterobacteria_phage	9.7e-112	99.5
ASF02957.1\|2135681_2135789_+	hypothetical protein	NA	NA	NA	NA
ASF02958.1\|2135769_2136501_-	osmoprotectant uptake system permease	NA	NA	NA	NA
ASF02959.1\|2136505_2137432_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	2.8e-23	30.8

DBSCAN-SWA_8

2372620 : 2386443

Enterobacteria_phage(60.0%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
ASF03172.1\|2372620_2374531_+	acyltransferase	C6ZR20	Salmonella_phage	4.7e-57	32.6
ASF03174.1\|2377258_2377390_+\|protease	protease FtsH-inhibitory lysogeny factor CIII	A5VWA4	Enterobacteria_phage	1.4e-16	100.0
ASF03175.1\|2377374_2377527_+	host cell division inhibitory peptide Kil	A5VWA5	Enterobacteria_phage	4.7e-21	100.0
ASF03176.1\|2377783_2378389_+	recombinase	K7P6W7	Enterobacteria_phage	4.1e-108	100.0
ASF03177.1\|2378388_2378772_+	hypothetical protein	K7P7R8	Enterobacteria_phage	1.2e-65	97.6
ASF03178.1\|2378795_2379092_+	RecBCD nuclease inhibitor	A5VWB0	Enterobacteria_phage	1.9e-50	98.0
ASF03179.1\|2379102_2379393_+	hypothetical protein	K7P7M4	Enterobacteria_phage	2.4e-45	99.0
ASF03180.1\|2379389_2379557_+	DUF2737 domain-containing protein	Q716F2	Shigella_phage	8.6e-24	98.2
ASF03181.1\|2379553_2380225_+	hypothetical protein	A0A0F6R7P8	Escherichia_coli_O157_typing_phage	3.0e-83	73.2
ASF03182.1\|2380397_2380586_+	hypothetical protein	Q286W7	Escherichia_phage	6.3e-23	92.6
ASF03183.1\|2380587_2380797_+	hypothetical protein	A0A0F6TJE4	Escherichia_coli_O157_typing_phage	1.3e-32	91.2
ASF03184.1\|2380793_2381423_+	DUF550 domain-containing protein	K7P7E3	Enterobacteria_phage	1.1e-55	58.6
ASF03185.1\|2381519_2381699_+	Eag protein	K7PL40	Enterobacteria_phage	2.5e-29	100.0
ASF03186.1\|2381830_2382031_+	transcriptional regulator	K7P7V0	Enterobacteria_phage	2.4e-33	100.0
ASF03187.1\|2382560_2383808_-	MFS transporter	NA	NA	NA	NA
ASF03188.1\|2383879_2384794_-	aminoimidazole riboside kinase	NA	NA	NA	NA
ASF03189.2\|2385009_2386443_+	glycoside hydrolase family 32 protein	F8WPR5	Bacillus_phage	7.0e-29	25.4

DBSCAN-SWA_9

2747045 : 2754185

Escherichia_phage(83.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
ASF03509.1\|2747045_2749607_+	DNA mismatch repair protein MutS	E3T5Q7	Cafeteria_roenbergensis_virus	1.7e-30	20.6
ASF03510.1\|2749712_2750369_+	serine/threonine protein phosphatase	A0A077SLQ6	Escherichia_phage	1.5e-50	46.8
ASF03511.1\|2750419_2751187_-	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	3.3e-70	56.7
ASF03512.1\|2751382_2752291_+	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	3.0e-118	76.9
ASF03513.1\|2752287_2753550_+	3-oxo-tetronate kinase	A0A077SLJ7	Escherichia_phage	1.3e-135	61.4
ASF03514.1\|2753546_2754185_+	aldolase	A0A077SK32	Escherichia_phage	1.4e-82	75.0

DBSCAN-SWA_10

3007109 : 3045303

Pseudomonas_phage(15.38%)

tRNA,transposase,protease,integrase

attL 2999217:2999231|attR 3021537:3021551

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2999217:2999231	attL	NA	NA	NA	NA
ASF03736.1\|3007109_3007829_-\|tRNA	tRNA (guanosine(46)-N7)-methyltransferase TrmB	NA	NA	NA	NA
ASF03737.1\|3007898_3008036_+	adenine glycosylase	NA	NA	NA	NA
ASF03738.1\|3007989_3009042_+	adenine DNA glycosylase	NA	NA	NA	NA
ASF03739.1\|3009069_3009345_+	Fe(2+)-trafficking protein	NA	NA	NA	NA
ASF03740.1\|3009409_3010489_+	lytic murein transglycosylase	NA	NA	NA	NA
ASF03741.1\|3010690_3011947_+	nucleoside permease NupG	NA	NA	NA	NA
ASF03742.1\|3011996_3014132_-	ornithine decarboxylase	NA	NA	NA	NA
ASF03743.1\|3014211_3014415_-	hypothetical protein	NA	NA	NA	NA
ASF03744.1\|3014529_3015237_+	hypothetical protein	NA	NA	NA	NA
ASF03745.1\|3015615_3016878_+\|integrase	integrase	A0A1B0VMI6	Pseudomonas_phage	6.9e-81	43.1
AVL26821.1\|3018012_3018222_+	hypothetical protein	NA	NA	NA	NA
ASF03746.1\|3018375_3018591_-	hypothetical protein	NA	NA	NA	NA
AVL26822.1\|3018857_3019376_-	DUF2931 domain-containing protein	NA	NA	NA	NA
ASF05861.1\|3019378_3019561_-	hypothetical protein	NA	NA	NA	NA
ASF03747.1\|3019861_3022711_+	helicase SNF2	A0A2H4J643	uncultured_Caudovirales_phage	2.2e-183	39.6
3021537:3021551	attR	NA	NA	NA	NA
ASF03748.1\|3022736_3023717_+	ATP-binding protein	A0A1B2RW50	Lymphocystis_disease_virus	4.2e-17	30.2
ASF03749.1\|3023726_3026114_+\|protease	serine protease	NA	NA	NA	NA
ASF03750.1\|3026123_3027752_+	site-specific DNA-methyltransferase	A0A0K1LNZ9	Escherichia_phage	4.6e-85	42.6
ASF03751.1\|3027754_3030625_+	restriction endonuclease subunit R	NA	NA	NA	NA
ASF03752.1\|3030713_3031007_+	hypothetical protein	NA	NA	NA	NA
ASF03753.2\|3031076_3031427_+	hypothetical protein	Q716C1	Shigella_phage	1.8e-39	98.9
ASF03754.1\|3031346_3032498_-\|transposase	IS30-like element IS30 family transposase	W5R8L2	Staphylococcus_phage	3.4e-42	35.6
ASF03755.1\|3032920_3033352_-	hypothetical protein	NA	NA	NA	NA
ASF03757.1\|3033645_3035169_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	6.2e-44	31.8
ASF03758.1\|3040980_3041418_+	IS66 family insertion sequence hypothetical protein	Q6H9S5	Enterobacteria_phage	1.5e-19	60.3
ASF03759.1\|3041414_3041765_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZBY2	Stx2-converting_phage	6.2e-40	63.8
ASF03760.1\|3041795_3043409_+\|transposase	IS66 family transposase ISEc43	A0A0P0ZEB3	Stx2-converting_phage	8.3e-172	61.4
ASF03761.1\|3043592_3044573_+\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	6.8e-185	99.1
AVL26823.1\|3044610_3044727_-	sugar kinase	Q6QLL3	Human_immunodeficiency_virus	4.7e-13	100.0
ASF03762.1\|3044940_3045303_-\|transposase	IS3 family transposase	A0A2I6AZV9	Macacine_betaherpesvirus	6.4e-40	62.5

DBSCAN-SWA_11

3856883 : 3882602

Escherichia_phage(30.0%)

tRNA,transposase,integrase

attL 3874691:3874750|attR 3879944:3880764

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
ASF04516.1\|3856883_3857573_+\|tRNA	tRNA (guanosine(18)-2'-O)-methyltransferase TrmH	NA	NA	NA	NA
ASF04517.1\|3857578_3859660_+	DNA helicase RecG	NA	NA	NA	NA
ASF04518.1\|3859825_3861031_-	sodium/glutamate symport carrier protein	NA	NA	NA	NA
ASF04519.1\|3861310_3862702_+	xanthine permease XanP	H9YQ34	environmental_Halophage	1.4e-71	100.0
ASF04520.1\|3862822_3864532_+	AsmA family protein	NA	NA	NA	NA
ASF04521.1\|3864584_3866903_-	alpha-xylosidase	NA	NA	NA	NA
ASF04522.1\|3866912_3868295_-	inner membrane symporter YicJ	NA	NA	NA	NA
ASF04523.1\|3868981_3870166_+	DUF4102 domain-containing protein	Q7M297	Enterobacteria_phage	3.4e-162	69.9
ASF04524.1\|3871015_3871105_-	acetyltransferase	NA	NA	NA	NA
ASF04525.1\|3871171_3874138_-\|transposase	Tn3-like element TnAs3 family transposase	A0A1B0V7H9	Salmonella_phage	0.0e+00	73.6
ASF04526.1\|3874140_3874695_-	recombinase family protein	A0A1B0V7I5	Salmonella_phage	4.0e-49	86.2
3874691:3874750	attL	NA	NA	NA	NA
ASF04527.1\|3874753_3875458_+\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
ASF04528.1\|3875491_3876271_-	dihydropteroate synthase	NA	NA	NA	NA
ASF04529.1\|3876264_3876612_-	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
ASF05890.1\|3876841_3877315_-	trimethoprim-resistant dihydrofolate reductase DfrA7	A0A1B2IBQ4	Erwinia_phage	8.4e-16	32.0
ASF04530.1\|3877472_3878486_+\|integrase	integron integrase	A0A1P8DJJ6	Virus_Rctr41k	1.0e-71	45.5
ASF04531.1\|3878424_3879039_+	DUF3330 domain-containing protein	NA	NA	NA	NA
ASF04532.1\|3879235_3879940_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
ASF04533.1\|3879986_3880388_-\|transposase	IS91 family transposase	NA	NA	NA	NA
ASF04534.1\|3880537_3881398_-	class A broad-spectrum beta-lactamase TEM-1	Q1MVP3	Enterobacteria_phage	4.6e-161	100.0
3879944:3880764	attR	NA	NA	NA	NA
ASF04535.1\|3881897_3882602_+\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0

DBSCAN-SWA_12

4443223 : 4502860

Enterobacteria_phage(28.57%)

tRNA,transposase,protease,integrase

attL 4445390:4445404|attR 4504142:4504156

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVL26867.1\|4443223_4444741_-\|tRNA	lysine--tRNA ligase heat inducible	A0A1V0SAC0	Catovirus	2.7e-87	38.0
ASF05033.1\|4444977_4446435_-	MFS transporter	A0A0P0IY73	Acinetobacter_phage	5.2e-48	29.4
4445390:4445404	attL	NA	NA	NA	NA
ASF05034.1\|4446493_4448641_-	lysine decarboxylase CadA	NA	NA	NA	NA
ASF05035.1\|4448720_4450055_-	cadaverine/lysine antiporter	NA	NA	NA	NA
ASF05036.1\|4450284_4450530_+	hypothetical protein	NA	NA	NA	NA
ASF05037.1\|4450420_4451959_-	transcriptional regulator	NA	NA	NA	NA
ASF05038.1\|4452245_4452464_+	hypothetical protein	NA	NA	NA	NA
ASF05039.1\|4452707_4453550_-	DUF4942 domain-containing protein	NA	NA	NA	NA
ASF05040.1\|4453634_4453832_-	DUF957 domain-containing protein	NA	NA	NA	NA
ASF05041.1\|4453851_4454340_-	hypothetical protein	NA	NA	NA	NA
ASF05042.1\|4454336_4454714_-	toxin	NA	NA	NA	NA
ASF05043.1\|4454760_4455138_-	type IV toxin-antitoxin system YeeU family antitoxin	NA	NA	NA	NA
ASF05044.1\|4455217_4455439_-	DUF987 domain-containing protein	A0A142F0X9	Klebsiella_phage	1.9e-10	45.8
ASF05045.1\|4456016_4456490_-	antirestriction protein	A9J566	Pseudomonas_phage	1.1e-12	30.3
AVL26868.1\|4456863_4457052_-	hypothetical protein	NA	NA	NA	NA
ASF05046.1\|4457745_4458117_-	hypothetical protein	NA	NA	NA	NA
ASF05048.1\|4458410_4459934_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	6.2e-44	31.8
ASF05049.1\|4465940_4467065_+\|transposase	IS21-like element IS100 family transposase	A0A2L1IVA1	Escherichia_phage	3.3e-199	99.7
ASF05050.1\|4467642_4468855_+\|transposase	IS3 family transposase	Q6H9S3	Enterobacteria_phage	6.0e-167	98.3
ASF05051.1\|4468895_4470038_-\|transposase	IS110 family transposase	NA	NA	NA	NA
ASF05053.1\|4470777_4471704_+	shiE	NA	NA	NA	NA
ASF05054.1\|4471653_4472847_-	MFS transporter	NA	NA	NA	NA
AVL26869.1\|4472919_4474707_+	aerobactin synthase IucA	NA	NA	NA	NA
ASF05055.1\|4474707_4475655_+	N-acetyltransferase	NA	NA	NA	NA
ASF05056.1\|4475654_4477397_+	IucA/IucC family siderophore biosynthesis protein	NA	NA	NA	NA
ASF05057.1\|4477393_4478731_+	lysine 6-monooxygenase	NA	NA	NA	NA
ASF05058.1\|4478652_4480932_+	TonB-dependent receptor	NA	NA	NA	NA
ASF05059.1\|4481896_4483420_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	6.2e-44	31.8
ASF05916.1\|4483713_4484085_+	hypothetical protein	NA	NA	NA	NA
ASF05062.1\|4485090_4485516_-	IS66 family insertion sequence hypothetical protein	Q6H9S5	Enterobacteria_phage	4.4e-48	97.9
AVL26870.1\|4487754_4487946_-	hypothetical protein	NA	NA	NA	NA
ASF05063.1\|4488052_4488490_+	IS66 family insertion sequence hypothetical protein	Q6H9S5	Enterobacteria_phage	1.5e-19	60.3
ASF05064.1\|4488486_4488837_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZBY2	Stx2-converting_phage	6.2e-40	63.8
ASF05065.1\|4488867_4490481_+\|transposase	IS66 family transposase ISEc43	A0A0P0ZEB3	Stx2-converting_phage	8.3e-172	61.4
ASF05066.1\|4490672_4491254_-	hypothetical protein	NA	NA	NA	NA
ASF05067.1\|4491300_4495158_-\|protease	serine protease	Q9LA58	Enterobacterial_phage	2.4e-225	38.3
ASF05068.1\|4495337_4495529_+	hypothetical protein	NA	NA	NA	NA
AVL26871.1\|4495518_4496556_-	type IX secretion system membrane protein PorP/SprF	NA	NA	NA	NA
ASF05070.1\|4501233_4501497_+	hypothetical protein	NA	NA	NA	NA
ASF05071.1\|4501597_4502860_-\|integrase	integrase	Q7M297	Enterobacteria_phage	9.3e-78	38.3
4504142:4504156	attR	NA	NA	NA	NA

DBSCAN-SWA_13

4985241 : 5047567

Emiliania_huxleyi_virus(12.5%)

protease,transposase,plate,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
ASF05511.1\|4985241_4986594_+\|protease	sigma E protease regulator RseP	NA	NA	NA	NA
ASF05512.1\|4986623_4989056_+	outer membrane protein assembly factor BamA	NA	NA	NA	NA
ASF05513.1\|4989177_4989663_+	chaperone protein Skp	NA	NA	NA	NA
ASF05514.1\|4989666_4990692_+	UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase	NA	NA	NA	NA
ASF05515.1\|4990796_4991252_+	beta-hydroxyacyl-ACP dehydratase	NA	NA	NA	NA
ASF05516.1\|4991255_4992044_+	acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase	NA	NA	NA	NA
ASF05517.1\|4992043_4993192_+	lipid-A-disaccharide synthase	NA	NA	NA	NA
ASF05518.1\|4993188_4993785_+	ribonuclease HII	V5LS49	Emiliania_huxleyi_virus	1.0e-26	40.0
ASF05519.1\|4993821_4997304_+	DNA polymerase III subunit alpha	Q8W6C3	Saccharomonospora_phage	2.2e-209	36.9
ASF05520.1\|4997316_4998276_+	acetyl-CoA carboxylase carboxyl transferase subunit alpha	NA	NA	NA	NA
ASF05521.1\|4998374_5000516_+	lysine decarboxylase LdcC	NA	NA	NA	NA
ASF05522.1\|5000572_5000962_+	VOC family protein	NA	NA	NA	NA
ASF05523.1\|5001026_5002325_+\|tRNA	tRNA(Ile)-lysidine synthetase	NA	NA	NA	NA
ASF05936.1\|5002373_5002628_-	protein rof	NA	NA	NA	NA
ASF05524.1\|5002620_5002821_-	hypothetical protein	NA	NA	NA	NA
ASF05525.1\|5002986_5003532_+	hypothetical protein	NA	NA	NA	NA
ASF05526.1\|5003528_5003951_+\|tRNA	aminoacyl-tRNA hydrolase	NA	NA	NA	NA
ASF05527.1\|5003964_5004675_+	copper homeostasis/adhesion lipoprotein NlpE	NA	NA	NA	NA
ASF05528.1\|5004681_5004933_-	hypothetical protein	NA	NA	NA	NA
ASF05529.1\|5004924_5005905_+\|transposase	IS110 family transposase IS621	NA	NA	NA	NA
ASF05530.1\|5006984_5008703_-\|tRNA	proline--tRNA ligase	NA	NA	NA	NA
ASF05531.1\|5008814_5009522_-\|tRNA	tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO	NA	NA	NA	NA
ASF05532.1\|5009518_5009923_-	Rcs stress response system protein RcsF	NA	NA	NA	NA
ASF05533.1\|5010040_5010856_-	methionine ABC transporter substrate-binding protein MetQ	NA	NA	NA	NA
ASF05534.1\|5010895_5011549_-	methionine ABC transporter	NA	NA	NA	NA
ASF05535.1\|5011541_5012573_-	methionine import ATP-binding protein MetN	G9BWD6	Planktothrix_phage	7.2e-36	40.2
ASF05536.1\|5012760_5013333_+	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	NA	NA	NA	NA
ASF05537.1\|5019230_5020034_+	2,5-didehydrogluconate reductase DkgB	A0A1V0SDE7	Indivirus	3.2e-39	36.6
ASF05538.1\|5020030_5020945_-	LysR family transcriptional regulator	NA	NA	NA	NA
ASF05539.1\|5021185_5021986_+	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA
ASF05540.1\|5022063_5022834_+	SAM-dependent methyltransferase	NA	NA	NA	NA
ASF05541.1\|5022881_5024240_-	lytic transglycosylase	A0A2H4J9N7	uncultured_Caudovirales_phage	5.8e-09	36.0
ASF05542.1\|5024311_5025067_-	hydroxyacylglutathione hydrolase	NA	NA	NA	NA
ASF05543.1\|5025100_5025823_+	SAM-dependent methyltransferase	NA	NA	NA	NA
ASF05544.1\|5025819_5026287_-	ribonuclease HI	J9Q745	Salmonella_phage	1.0e-50	58.7
ASF05937.1\|5026351_5027083_+	DNA polymerase III subunit epsilon	A0A1X9SH08	Bradyrhizobium_phage	3.4e-40	39.0
AVL26888.1\|5027022_5027202_-	hypothetical protein	NA	NA	NA	NA
ASF05545.1\|5027618_5028404_+	aminopeptidase	NA	NA	NA	NA
ASF05546.1\|5028540_5029020_-	hypothetical protein	NA	NA	NA	NA
ASF05547.2\|5029029_5029944_-	hypothetical protein	NA	NA	NA	NA
ASF05548.1\|5029987_5030470_-	type VI secretion system tube protein Hcp	NA	NA	NA	NA
ASF05549.1\|5030493_5031846_-	hypothetical protein	NA	NA	NA	NA
ASF05938.1\|5031856_5035321_-	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
ASF05550.1\|5035399_5036815_-	type VI secretion system protein TssA	NA	NA	NA	NA
ASF05551.1\|5036819_5037563_-	type VI secretion system-associated protein TagO	NA	NA	NA	NA
ASF05552.1\|5037559_5040319_-	type VI secretion system ATPase TssH	K4FB40	Cronobacter_phage	9.4e-83	30.6
ASF05553.1\|5040327_5041089_-	hypothetical protein	NA	NA	NA	NA
ASF05554.1\|5041093_5042425_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
ASF05555.1\|5042427_5042952_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
ASF05556.1\|5042948_5044229_-	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA
ASF05557.1\|5044253_5045336_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
ASF05558.1\|5045299_5047150_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
ASF05559.1\|5047153_5047567_-\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. CP022087

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

14901 : 63791

Stx2-converting_phage(21.05%)

transposase,integrase,protease

attL 29582:29599|attR 67999:68016

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
ASF05955.1\|14901_16470_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	5.6e-141	59.9
ASF05956.1\|16579_17713_-\|transposase	IS110 family transposase ISEc45	NA	NA	NA	NA
ASF05957.1\|18687_19899_-	acyltransferase	NA	NA	NA	NA
ASF05958.1\|19915_20545_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.2e-20	35.4
ASF05959.1\|20537_21176_-	hypothetical protein	NA	NA	NA	NA
ASF05960.1\|21255_22494_-	hypothetical protein	NA	NA	NA	NA
ASF05961.1\|22490_23621_-	permease	NA	NA	NA	NA
ASF05962.1\|24000_24249_+\|transposase	IS3 family transposase	A0A0N7BVE9	Escherichia_phage	1.2e-24	82.4
ASF05963.1\|24242_24335_+\|transposase	IS66 family transposase	NA	NA	NA	NA
ASF05964.1\|24391_24628_+	IS66 family insertion sequence hypothetical protein	Q6H9S5	Enterobacteria_phage	2.0e-18	63.8
ASF05965.2\|24599_25775_-\|protease	serine protease	Q9LA58	Enterobacterial_phage	4.2e-72	46.8
AVL26920.1\|25746_26394_-\|protease	serine protease	Q9LA58	Enterobacterial_phage	6.1e-33	43.1
ASF05966.1\|27915_28116_-	hypothetical protein	NA	NA	NA	NA
ASF05967.1\|28708_29689_-\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	6.8e-185	99.1
29582:29599	attL	NA	NA	NA	NA
ASF05969.1\|30409_30634_-	hypothetical protein	A0A0N7BTS3	Escherichia_phage	6.4e-06	96.0
ASF05970.1\|33878_34034_-	reverse transcriptase	NA	NA	NA	NA
ASF06012.1\|34327_34699_+	hypothetical protein	NA	NA	NA	NA
ASF05972.1\|36164_36962_+	transcriptional activator AggR	NA	NA	NA	NA
ASF05973.1\|38895_39876_-\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	3.4e-184	98.8
ASF05974.1\|40690_41230_-	isopentenyl-diphosphate Delta-isomerase	NA	NA	NA	NA
ASF05975.2\|41233_42262_-	hypothetical protein	NA	NA	NA	NA
ASF05977.1\|42697_43198_+\|transposase	transposase	A0A1B1P776	Bacillus_phage	2.4e-08	28.2
ASF05980.1\|44213_45752_-\|transposase	IS66 family transposase	A0A0P0ZBS5	Stx2-converting_phage	1.2e-281	93.9
ASF05981.1\|45801_46149_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZBY2	Stx2-converting_phage	2.2e-61	100.0
ASF06013.1\|46145_46526_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZBP6	Stx2-converting_phage	2.7e-65	98.4
ASF05982.1\|47319_47823_-	AAF/I fimbrial subunit	NA	NA	NA	NA
AVL26921.1\|48374_50903_-	pilin outer membrane usher protein SafC	NA	NA	NA	NA
AVL26922.1\|50916_51675_-	molecular chaperone	NA	NA	NA	NA
ASF05983.1\|51815_52019_-	hypothetical protein	NA	NA	NA	NA
ASF05984.1\|51988_52099_-	invasion protein	NA	NA	NA	NA
ASF05985.1\|52331_52511_+	hypothetical protein	NA	NA	NA	NA
ASF06015.1\|52517_53084_-	recombinase family protein	Q1MVP4	Enterobacteria_phage	4.8e-34	45.6
ASF05986.1\|53215_53593_+	peptidase	A0A1W6JNS2	Morganella_phage	6.1e-25	47.2
ASF06014.1\|54794_54866_+	DUF4113 domain-containing protein	NA	NA	NA	NA
ASF05987.1\|54867_55284_-	recombinase	NA	NA	NA	NA
ASF05988.1\|55276_56257_-	recombinase	A0A0A7NPX4	Enterobacteria_phage	2.2e-79	51.4
ASF05989.1\|56670_56979_-	molecular chaperone GroEL	NA	NA	NA	NA
ASF05990.1\|57065_57710_-	ParA family protein	NA	NA	NA	NA
ASF05991.1\|57888_58695_-\|integrase	phage integrase family protein	I3WFA4	Macacine_betaherpesvirus	2.7e-54	93.9
ASF05992.1\|58695_59001_-	plasmid maintenance protein CcdB	NA	NA	NA	NA
ASF05993.1\|59002_59221_-	plasmid maintenance protein CcdA	NA	NA	NA	NA
AVL26923.1\|59815_60046_+	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA
ASF06016.1\|60069_60471_+	PIN domain-containing protein	NA	NA	NA	NA
ASF05994.2\|60996_61485_+	hypothetical protein	NA	NA	NA	NA
AVL26924.1\|61794_62772_+	replication initiation protein	J9Q7H0	Salmonella_phage	8.8e-100	59.2
ASF05995.1\|63050_63791_-\|integrase	site-specific integrase	I3WFA4	Macacine_betaherpesvirus	1.6e-24	57.6
67999:68016	attR	NA	NA	NA	NA

DBSCAN-SWA_2

67908 : 74862

Stx2-converting_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
ASF06002.1\|67908_68889_+\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	3.4e-184	98.8
AVL26926.1\|68926_69049_-	sugar kinase	Q6QLL3	Human_immunodeficiency_virus	9.0e-15	92.5
ASF06003.1\|69616_70294_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZCV4	Stx2-converting_phage	3.3e-21	46.0
ASF06004.1\|70293_70641_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZDM8	Stx2-converting_phage	2.6e-46	76.6
ASF06005.1\|70660_72232_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	2.2e-169	58.5
ASF06006.1\|72544_72841_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZDM8	Stx2-converting_phage	3.4e-31	64.4
ASF06007.1\|72837_73275_-	IS66 family insertion sequence hypothetical protein	Q6H9S5	Enterobacteria_phage	3.4e-19	60.3
ASF06008.1\|73500_74061_-	conjugal transfer protein	NA	NA	NA	NA
ASF06009.1\|74115_74862_-	conjugal transfer pilus acetylase TraX	A0A077JBM8	Xanthomonas_phage	3.2e-09	30.9

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. CP022085

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 109693

130

Salmonella_phage(80.17%)

integrase,tRNA,capsid,tail,protease,terminase

attL 2177:2191|attR 30254:30268

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
ASF00832.1\|1081_3190_-	cobalamin biosynthesis protein CobT	J9Q7G6	Salmonella_phage	1.5e-226	65.9
2177:2191	attL	NA	NA	NA	NA
ASF00833.1\|3290_3503_-	hypothetical protein	NA	NA	NA	NA
ASF00834.1\|3750_4137_+	XRE family transcriptional regulator	NA	NA	NA	NA
ASF00952.2\|4131_5235_-\|integrase	integrase	A0A1P8DTG6	Proteus_phage	2.9e-27	33.8
ASF00835.1\|5442_7356_-	DUF1737 domain-containing protein	B6DZ89	Enterobacteria_phage	3.3e-175	49.9
ASF00836.1\|7469_8036_+	hypothetical protein	Q71T98	Escherichia_phage	1.7e-18	81.0
ASF00837.1\|9181_9472_-	C-type natriuretic protein	J9Q7S1	Salmonella_phage	6.9e-37	78.1
ASF00839.1\|9617_9833_-	hypothetical protein	J9Q6I3	Salmonella_phage	5.7e-20	72.5
ASF00840.1\|9816_9996_-	hypothetical protein	J9Q729	Salmonella_phage	5.4e-16	70.7
ASF00841.1\|9992_11315_-	DNA ligase	J9Q7G5	Salmonella_phage	1.5e-240	91.1
ASF00842.1\|11311_11569_-	hypothetical protein	J9Q7R9	Salmonella_phage	3.9e-15	59.0
ASF00843.1\|11849_12632_-	hypothetical protein	J9Q7Z0	Salmonella_phage	1.7e-53	41.1
ASF00844.1\|12707_13889_-	DNA primase	J9Q720	Salmonella_phage	2.0e-207	93.0
ASF00845.1\|13970_15311_-	DNA helicase	J9Q7G4	Salmonella_phage	5.7e-235	93.5
ASF00846.1\|15354_16095_-	hypothetical protein	J9Q7R8	Salmonella_phage	1.4e-126	88.8
AVL26712.1\|16275_17970_-	hypothetical protein	X2KLG0	Campylobacter_phage	4.1e-12	24.7
ASF00847.1\|18021_18381_-	hypothetical protein	J9Q7G3	Salmonella_phage	1.5e-44	97.9
ASF00848.1\|18380_19049_-	plasmid stability protein	J9Q7R7	Salmonella_phage	1.7e-110	91.4
ASF00849.1\|19367_19637_+	DUF1778 domain-containing protein	NA	NA	NA	NA
ASF00850.1\|19644_20166_+	N-acetyltransferase	NA	NA	NA	NA
ASF00851.1\|20197_20383_-	hypothetical protein	J9Q7G2	Salmonella_phage	4.9e-20	75.0
ASF00852.1\|20333_20585_-	hypothetical protein	J9Q7R6	Salmonella_phage	1.1e-25	78.0
ASF00853.1\|20586_21279_-	hypothetical protein	J9Q7Y7	Salmonella_phage	1.4e-123	93.9
ASF00854.1\|21292_21616_-	hypothetical protein	J9Q6E7	Salmonella_phage	3.2e-43	84.1
ASF00855.1\|21713_22226_-	hypothetical protein	A0A0P0ZFL3	Escherichia_phage	8.2e-65	68.2
AVL26713.1\|22311_25683_-	hypothetical protein	A0A077SK37	Escherichia_phage	8.5e-86	42.8
ASF00856.1\|25777_30484_-	DUF1983 domain-containing protein	J9Q713	Salmonella_phage	0.0e+00	73.7
30254:30268	attR	NA	NA	NA	NA
ASF00857.1\|30500_31091_-\|tail	tail assembly protein	J9Q7F8	Salmonella_phage	2.9e-106	95.9
ASF00858.1\|31078_31876_-\|tail	phage tail protein	J9Q7R4	Salmonella_phage	3.9e-154	93.6
ASF00859.1\|31868_32600_-\|tail	phage minor tail protein L	J9Q7Y5	Salmonella_phage	1.5e-133	96.6
ASF00860.1\|32649_32985_-\|tail	phage tail protein	J9Q6E1	Salmonella_phage	3.0e-52	86.4
ASF00861.1\|33027_37590_-\|tail	phage tail tape measure protein	J9Q712	Salmonella_phage	0.0e+00	82.6
ASF00862.1\|37597_37867_-	hypothetical protein	J9Q7F7	Salmonella_phage	8.7e-34	93.5
ASF00863.1\|37947_38265_-	hypothetical protein	J9Q7R3	Salmonella_phage	1.5e-48	95.2
ASF00864.1\|38332_39070_-	hypothetical protein	J9Q7Y4	Salmonella_phage	1.0e-113	88.6
ASF00865.1\|39143_39527_-	hypothetical protein	J9Q6D8	Salmonella_phage	1.5e-55	79.5
ASF00866.1\|39528_40002_-	hypothetical protein	J9Q711	Salmonella_phage	2.8e-75	89.2
ASF00867.1\|39992_40337_-	hypothetical protein	J9Q7F6	Salmonella_phage	5.1e-55	94.7
ASF00868.1\|40408_41242_-	hypothetical protein	J9Q7R2	Salmonella_phage	1.8e-138	88.8
ASF00869.1\|41241_41676_-	hypothetical protein	J9Q7Y3	Salmonella_phage	1.0e-60	81.2
ASF00870.1\|41773_42694_-\|capsid	phage major capsid protein	J9Q710	Salmonella_phage	8.7e-150	87.9
ASF00871.1\|42719_43607_-	hypothetical protein	J9Q7F4	Salmonella_phage	2.4e-133	88.3
ASF00872.1\|43628_45203_-	hypothetical protein	J9Q7R1	Salmonella_phage	2.2e-286	93.1
ASF00873.1\|45229_46486_-\|terminase	terminase	J9Q7Y2	Salmonella_phage	3.4e-245	96.9
ASF00874.1\|46485_47118_-	DNA-binding protein	J9Q6D4	Salmonella_phage	8.2e-91	84.6
ASF00875.1\|47313_47580_-	hypothetical protein	J9Q757	Salmonella_phage	1.4e-36	88.6
ASF00876.1\|47589_48480_-	hypothetical protein	J9Q7I6	Salmonella_phage	2.9e-166	98.3
ASF00877.1\|48476_49142_-	adenylyl-sulfate kinase	J9Q807	Salmonella_phage	2.8e-110	98.6
ASF00878.1\|49138_49807_-	chromosome partitioning protein ParB	J9Q6L1	Salmonella_phage	5.6e-106	89.6
ASF00879.1\|49806_50505_-	chromosome partitioning protein ParB	J9Q756	Salmonella_phage	8.7e-110	86.6
ASF00880.1\|50569_52129_+	ATP-dependent helicase	J9Q7I4	Salmonella_phage	5.8e-279	93.1
ASF00881.1\|52131_52410_+	hypothetical protein	J9Q7T9	Salmonella_phage	4.6e-22	58.2
ASF00882.1\|52442_53042_+	hypothetical protein	NA	NA	NA	NA
ASF00883.1\|53187_53676_+	hypothetical protein	NA	NA	NA	NA
ASF00884.1\|53691_54291_+	hypothetical protein	NA	NA	NA	NA
ASF00885.1\|54287_54812_+	transcriptional regulator	J9Q6L0	Salmonella_phage	1.5e-66	79.1
ASF00886.1\|55100_55751_+	hypothetical protein	J9Q754	Salmonella_phage	1.1e-98	84.7
ASF00887.1\|55799_56003_+	hypothetical protein	J9Q7I3	Salmonella_phage	5.9e-27	91.0
ASF00888.1\|56024_56255_+	hypothetical protein	NA	NA	NA	NA
ASF00889.1\|56870_57353_-	hypothetical protein	J9Q805	Salmonella_phage	3.0e-61	69.2
ASF00890.1\|57703_58078_-	hypothetical protein	NA	NA	NA	NA
ASF00891.1\|58196_58592_-	hypothetical protein	J9Q7I1	Salmonella_phage	1.8e-32	54.6
ASF00892.1\|58718_59030_-	hypothetical protein	J9Q7T7	Salmonella_phage	3.3e-29	64.1
ASF00954.1\|59184_59514_-	hypothetical protein	NA	NA	NA	NA
ASF00893.1\|59652_59871_-	hypothetical protein	J9Q804	Salmonella_phage	2.3e-32	91.7
ASF00894.1\|61411_61597_-	hypothetical protein	NA	NA	NA	NA
ASF00955.1\|61633_61855_-	hypothetical protein	J9Q750	Salmonella_phage	1.6e-17	55.2
ASF00895.1\|62094_64128_-\|tRNA	methionine--tRNA ligase	A0A1V0SEZ7	Hokovirus	1.7e-44	24.1
ASF00896.1\|64285_65386_+	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA
ASF00897.1\|65423_65813_-	DNA repair protein	A0A077SK24	Escherichia_phage	1.2e-65	92.2
ASF00957.1\|65985_66510_-	hypothetical protein	A0A2D2W4T4	Escherichia_phage	3.8e-33	48.5
ASF00956.2\|66523_67378_-	hypothetical protein	A0A0F6TJ66	Escherichia_coli_O157_typing_phage	1.5e-23	94.8
ASF00898.1\|67374_67596_-	hypothetical protein	G8C7S3	Escherichia_phage	3.6e-09	52.1
ASF00899.1\|67588_68164_-	DUF551 domain-containing protein	K7P7E4	Enterobacteria_phage	5.6e-38	55.3
ASF00900.1\|68165_68552_-	hypothetical protein	A0A088CE95	Shigella_phage	9.5e-42	74.2
ASF00901.1\|68562_68826_-	hypothetical protein	A0A2P0P958	Salmonella_phage	1.1e-30	72.4
ASF00902.1\|68827_69223_-	hypothetical protein	C6ZR27	Salmonella_phage	1.8e-19	50.4
ASF00903.1\|69233_69497_-	hypothetical protein	A0A2P0P958	Salmonella_phage	1.5e-30	71.3
ASF00904.1\|69498_70020_-	hypothetical protein	A0A2I6TCG8	Escherichia_phage	1.8e-35	72.6
ASF00905.1\|70016_70340_-	carboxylate--amine ligase	A0A222YZB4	Escherichia_phage	4.7e-42	86.3
ASF00906.1\|70341_70872_-	hypothetical protein	A0A077SLK5	Escherichia_phage	5.9e-34	47.3
ASF00907.1\|70858_71113_-	hypothetical protein	A0A1V0E5L1	Salmonella_phage	4.2e-38	95.2
ASF00908.1\|71109_71652_-	hypothetical protein	A5VWB1	Enterobacteria_phage	1.3e-44	78.6
ASF00909.1\|71790_72171_-	hypothetical protein	J9Q801	Salmonella_phage	1.9e-26	66.3
ASF00910.1\|72170_72875_-	hypothetical protein	J9Q6K2	Salmonella_phage	2.6e-85	75.0
ASF00911.1\|72936_74622_-	DUF4942 domain-containing protein	J9Q747	Salmonella_phage	0.0e+00	91.6
ASF00958.2\|74725_75400_-	hypothetical protein	A0A0E3GMH9	Enterobacteria_phage	6.9e-96	80.4
ASF00912.1\|75345_75627_-	hypothetical protein	A0A0E3JPW0	Enterobacteria_phage	2.8e-35	69.9
ASF00913.1\|75681_76251_-	hypothetical protein	J9Q7H6	Salmonella_phage	1.5e-51	60.3
ASF00914.1\|76390_76549_-	DUF3927 domain-containing protein	NA	NA	NA	NA
ASF00915.1\|76548_76974_-	tellurite/colicin resistance protein	Q71TK7	Escherichia_phage	4.4e-56	80.1
ASF00916.1\|77067_77256_-	hypothetical protein	J9Q800	Salmonella_phage	9.4e-11	51.6
ASF00917.1\|77252_77504_-	hypothetical protein	NA	NA	NA	NA
ASF00918.1\|77905_78499_-	ribonuclease HI	J9Q745	Salmonella_phage	4.8e-93	83.8
ASF00919.1\|79080_79311_-	hypothetical protein	J9Q7H5	Salmonella_phage	3.4e-31	84.2
ASF00920.1\|79498_80092_-	phage N-6-adenine-methyltransferase	J9Q7T2	Salmonella_phage	5.0e-98	85.3
ASF00921.1\|80274_81084_-	hypothetical protein	J9Q7Z9	Salmonella_phage	1.2e-65	53.6
ASF00922.1\|81244_81802_-	3'-5' exonuclease	J9Q6J8	Salmonella_phage	2.8e-87	83.6
ASF00923.1\|81811_82231_-	hypothetical protein	J9Q743	Salmonella_phage	9.3e-51	71.2
AVL26714.1\|82292_82937_-	hypothetical protein	J9Q7H4	Salmonella_phage	4.6e-97	81.8
ASF00924.1\|82936_83413_-	dihydrofolate reductase	J9Q7T1	Salmonella_phage	1.3e-80	89.2
ASF00925.1\|83409_83823_-	hypothetical protein	J9Q7Z8	Salmonella_phage	1.1e-64	86.9
ASF00926.1\|83824_84928_-	thymidylate synthase	J9Q6J6	Salmonella_phage	1.7e-192	87.2
AVL26715.1\|85095_85965_-	phosphoribosyl-ATP pyrophosphohydrolase	J9Q742	Salmonella_phage	5.3e-133	80.6
ASF00927.1\|86042_87185_-	ribonucleotide-diphosphate reductase subunit beta	J9Q7H3	Salmonella_phage	7.6e-196	88.4
ASF00928.1\|87293_89609_-	ribonucleoside-diphosphate reductase subunit alpha	J9Q7T0	Salmonella_phage	0.0e+00	84.0
ASF00929.1\|89682_90252_-	hypothetical protein	J9Q7Z7	Salmonella_phage	1.1e-89	85.7
ASF00930.1\|90261_91005_-	hypothetical protein	J9Q6J5	Salmonella_phage	7.5e-51	46.8
ASF00931.1\|90994_92911_-	exonuclease	J9Q741	Salmonella_phage	1.1e-247	72.7
ASF00959.1\|92907_93099_-	hypothetical protein	J9Q7H1	Salmonella_phage	8.3e-23	74.6
ASF00932.1\|93140_94226_-	exonuclease	J9Q7S9	Salmonella_phage	8.0e-187	87.5
ASF00933.1\|94480_95125_-	hypothetical protein	J9Q739	Salmonella_phage	4.1e-106	85.8
ASF00934.1\|95446_96541_+	replication initiation protein	J9Q7H0	Salmonella_phage	1.3e-75	45.4
ASF00935.1\|97120_97333_-	hypothetical protein	J9Q7S8	Salmonella_phage	3.4e-33	94.3
ASF00936.1\|97332_97668_-	hypothetical protein	J9Q7Z5	Salmonella_phage	8.6e-39	73.9
ASF00937.1\|97664_97844_-	hypothetical protein	J9Q6J1	Salmonella_phage	4.0e-11	67.8
ASF00938.1\|97883_98159_-	hypothetical protein	J9Q738	Salmonella_phage	9.8e-33	73.6
ASF00960.1\|98214_98631_-	hypothetical protein	J9Q7G9	Salmonella_phage	1.3e-60	76.1
ASF00939.1\|98701_99091_-	hypothetical protein	Q9EYC4	Enterobacteria_phage	4.3e-58	82.5
ASF00940.1\|99111_99852_-	hypothetical protein	G4KK93	Yersinia_phage	9.8e-27	32.7
ASF00941.1\|99899_100724_-	hypothetical protein	A0A0U4IID7	Pseudomonas_phage	4.1e-18	25.3
ASF00942.1\|100819_101650_-\|protease	serine protease	J9Q7Z4	Salmonella_phage	3.1e-122	94.9
ASF00943.1\|101653_101854_-	hypothetical protein	J9Q6J0	Salmonella_phage	3.2e-09	60.6
ASF00944.1\|101946_103020_-	recombinase	J9Q736	Salmonella_phage	1.4e-196	95.2
ASF00945.1\|103022_103289_-	hypothetical protein	J9Q7G8	Salmonella_phage	6.8e-31	78.4
ASF00946.1\|103288_104233_-	exonuclease	J9Q7S6	Salmonella_phage	2.3e-166	90.8
ASF00947.1\|104293_105322_-	regulator	J9Q7Z3	Salmonella_phage	5.5e-145	87.6
ASF00948.1\|105439_105871_-	hypothetical protein	J9Q6I8	Salmonella_phage	1.5e-64	86.7
ASF00949.1\|105996_109515_-	DNA polymerase III subunit alpha	J9Q7Z2	Salmonella_phage	0.0e+00	94.1
ASF00950.1\|109489_109693_-	hypothetical protein	J9Q6I7	Salmonella_phage	5.2e-31	92.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP022086

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. CP022087

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. CP022085

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection