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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP022054 Corynebacterium jeikeium strain FDAARGOS_328 chromosome, complete genome 0 crisprs DEDDh,csa3,cas4,WYL,cas3,DinG 0 0 189 0

Results visualization

1. CP022054
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 4170 4 Vibrio_phage(33.33%) integrase attL 2179:2196|attR 6034:6051
DBSCAN-SWA_2 8698 : 15794 6 Tupanvirus(66.67%) NA NA
DBSCAN-SWA_3 23642 : 34068 9 Agrobacterium_phage(40.0%) tRNA,protease NA
DBSCAN-SWA_4 41570 : 45319 3 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_5 54959 : 56807 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_6 61276 : 62242 1 Acanthocystis_turfacea_Chlorella_virus(100.0%) NA NA
DBSCAN-SWA_7 74584 : 85837 10 Indivirus(33.33%) NA NA
DBSCAN-SWA_8 117776 : 119393 1 Brazilian_cedratvirus(100.0%) NA NA
DBSCAN-SWA_9 143527 : 145213 2 Synechococcus_phage(50.0%) NA NA
DBSCAN-SWA_10 150692 : 155454 5 Enterobacteria_phage(50.0%) NA NA
DBSCAN-SWA_11 164528 : 168407 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_12 174751 : 177640 1 Skermania_phage(100.0%) NA NA
DBSCAN-SWA_13 181219 : 183388 1 Diachasmimorpha_longicaudata_entomopoxvirus(100.0%) NA NA
DBSCAN-SWA_14 187013 : 190253 1 Gordonia_phage(100.0%) NA NA
DBSCAN-SWA_15 198757 : 199549 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_16 237820 : 238657 1 Paramecium_bursaria_Chlorella_virus(100.0%) NA NA
DBSCAN-SWA_17 243072 : 244269 1 unidentified_phage(100.0%) NA NA
DBSCAN-SWA_18 247826 : 253102 3 Saccharomonospora_phage(33.33%) NA NA
DBSCAN-SWA_19 257146 : 257947 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_20 272327 : 274238 1 Ostreococcus_lucimarinus_virus(100.0%) NA NA
DBSCAN-SWA_21 278090 : 279686 1 Cedratvirus(100.0%) NA NA
DBSCAN-SWA_22 289783 : 290371 1 Clostridium_phage(100.0%) NA NA
DBSCAN-SWA_23 297695 : 298475 1 Pandoravirus(100.0%) tRNA NA
DBSCAN-SWA_24 317102 : 317768 1 Pandoravirus(100.0%) NA NA
DBSCAN-SWA_25 322365 : 325835 5 uncultured_Mediterranean_phage(33.33%) NA NA
DBSCAN-SWA_26 332787 : 334347 1 uncultured_phage(100.0%) NA NA
DBSCAN-SWA_27 338897 : 341048 1 Pseudomonas_phage(100.0%) NA NA
DBSCAN-SWA_28 351009 : 351654 1 Emiliania_huxleyi_virus(100.0%) NA NA
DBSCAN-SWA_29 355575 : 356490 1 Gordonia_phage(100.0%) NA NA
DBSCAN-SWA_30 369583 : 371008 1 Erysipelothrix_phage(100.0%) NA NA
DBSCAN-SWA_31 385046 : 387947 1 Bodo_saltans_virus(100.0%) NA NA
DBSCAN-SWA_32 406140 : 406893 1 Rhodococcus_phage(100.0%) NA NA
DBSCAN-SWA_33 410750 : 415414 2 Mycobacterium_phage(50.0%) NA NA
DBSCAN-SWA_34 418656 : 421744 4 Bacillus_virus(50.0%) NA NA
DBSCAN-SWA_35 434831 : 436082 1 Enterobacteria_phage(100.0%) NA NA
DBSCAN-SWA_36 439750 : 446689 4 Escherichia_phage(33.33%) NA NA
DBSCAN-SWA_37 455333 : 472551 14 Acanthocystis_turfacea_Chlorella_virus(16.67%) tRNA NA
DBSCAN-SWA_38 476584 : 477037 1 Streptomyces_phage(100.0%) NA NA
DBSCAN-SWA_39 497834 : 499895 1 Tupanvirus(100.0%) tRNA NA
DBSCAN-SWA_40 513673 : 517807 3 uncultured_Mediterranean_phage(33.33%) NA NA
DBSCAN-SWA_41 521085 : 521973 1 Rhodococcus_phage(100.0%) protease NA
DBSCAN-SWA_42 525410 : 529666 2 Bacillus_virus(50.0%) tRNA NA
DBSCAN-SWA_43 533248 : 534445 1 Pandoravirus(100.0%) NA NA
DBSCAN-SWA_44 540067 : 543654 3 Paramecium_bursaria_Chlorella_virus(50.0%) NA NA
DBSCAN-SWA_45 548662 : 554925 6 Murmansk_poxvirus(33.33%) NA NA
DBSCAN-SWA_46 558148 : 566164 8 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_47 574904 : 584486 9 Staphylococcus_phage(50.0%) transposase NA
DBSCAN-SWA_48 591494 : 592463 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_49 597863 : 602474 5 Bacillus_phage(25.0%) transposase NA
DBSCAN-SWA_50 605495 : 607127 1 Klosneuvirus(100.0%) NA NA
DBSCAN-SWA_51 616965 : 618603 1 Gordonia_phage(100.0%) NA NA
DBSCAN-SWA_52 641177 : 642533 1 Tupanvirus(100.0%) NA NA
DBSCAN-SWA_53 654696 : 656292 1 Hokovirus(100.0%) NA NA
DBSCAN-SWA_54 663406 : 666193 1 Bodo_saltans_virus(100.0%) NA NA
DBSCAN-SWA_55 695331 : 699859 3 Synechococcus_phage(50.0%) NA NA
DBSCAN-SWA_56 720029 : 732397 11 uncultured_Mediterranean_phage(14.29%) NA NA
DBSCAN-SWA_57 738736 : 741334 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_58 753773 : 760397 6 Pseudomonas_phage(25.0%) transposase NA
DBSCAN-SWA_59 767303 : 768608 1 Serratia_phage(100.0%) tRNA NA
DBSCAN-SWA_60 785547 : 794683 7 Orpheovirus(33.33%) tRNA NA
DBSCAN-SWA_61 810601 : 819944 7 Bacillus_phage(66.67%) transposase NA
DBSCAN-SWA_62 824022 : 824796 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_63 835199 : 836006 1 Acinetobacter_phage(100.0%) NA NA
DBSCAN-SWA_64 853297 : 854857 1 Paramecium_bursaria_Chlorella_virus(100.0%) NA NA
DBSCAN-SWA_65 874434 : 875076 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_66 882317 : 885875 1 Saccharomonospora_phage(100.0%) NA NA
DBSCAN-SWA_67 896311 : 901054 2 uncultured_virus(50.0%) tRNA NA
DBSCAN-SWA_68 932668 : 937058 3 Planktothrix_phage(50.0%) NA NA
DBSCAN-SWA_69 940338 : 945558 4 Clostridium_phage(50.0%) NA NA
DBSCAN-SWA_70 950675 : 957170 5 Tupanvirus(33.33%) NA NA
DBSCAN-SWA_71 965140 : 971063 3 Mycoplasma_phage(50.0%) NA NA
DBSCAN-SWA_72 1007272 : 1008100 1 Ostreococcus_lucimarinus_virus(100.0%) NA NA
DBSCAN-SWA_73 1030013 : 1030586 1 Clostridium_phage(100.0%) NA NA
DBSCAN-SWA_74 1037547 : 1042394 4 Mycoplasma_phage(33.33%) NA NA
DBSCAN-SWA_75 1046494 : 1052189 4 Staphylococcus_phage(33.33%) transposase NA
DBSCAN-SWA_76 1057168 : 1058554 1 Orpheovirus(100.0%) tRNA NA
DBSCAN-SWA_77 1063600 : 1066596 3 Pseudomonas_phage(50.0%) NA NA
DBSCAN-SWA_78 1069697 : 1071530 1 Catovirus(100.0%) NA NA
DBSCAN-SWA_79 1083456 : 1085373 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_80 1098573 : 1100007 1 Klosneuvirus(100.0%) NA NA
DBSCAN-SWA_81 1108849 : 1121064 11 Streptococcus_phage(40.0%) NA NA
DBSCAN-SWA_82 1125475 : 1132976 5 Mycobacterium_phage(50.0%) transposase NA
DBSCAN-SWA_83 1141043 : 1146442 5 Salmonella_phage(33.33%) integrase attL 1130256:1130269|attR 1153885:1153898
DBSCAN-SWA_84 1150532 : 1151768 1 Gordonia_phage(100.0%) NA NA
DBSCAN-SWA_85 1161793 : 1162567 1 Mycobacterium_phage(100.0%) NA NA
DBSCAN-SWA_86 1170715 : 1175049 4 Aeromonas_phage(25.0%) NA NA
DBSCAN-SWA_87 1183712 : 1184987 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_88 1193150 : 1243429 46 Bacillus_phage(30.0%) integrase,tRNA,transposase,protease attL 1202899:1202913|attR 1241142:1241156
DBSCAN-SWA_89 1251743 : 1266373 12 Tupanvirus(33.33%) tRNA NA
DBSCAN-SWA_90 1273994 : 1274969 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_91 1278018 : 1281745 3 Bacillus_phage(66.67%) NA NA
DBSCAN-SWA_92 1287442 : 1287919 1 Tetraselmis_virus(100.0%) NA NA
DBSCAN-SWA_93 1302733 : 1315735 21 Gordonia_phage(33.33%) NA NA
DBSCAN-SWA_94 1320959 : 1345531 24 Corynebacterium_phage(25.0%) portal,tail NA
DBSCAN-SWA_95 1356734 : 1372787 27 Gordonia_phage(30.0%) NA NA
DBSCAN-SWA_96 1378009 : 1403854 24 Corynebacterium_phage(28.57%) portal,terminase NA
DBSCAN-SWA_97 1413789 : 1416590 6 Streptococcus_phage(25.0%) NA NA
DBSCAN-SWA_98 1423223 : 1427399 3 Acanthocystis_turfacea_Chlorella_virus(50.0%) NA NA
DBSCAN-SWA_99 1444563 : 1446486 2 Lactococcus_phage(50.0%) NA NA
DBSCAN-SWA_100 1449843 : 1451547 1 Acidianus_filamentous_virus(100.0%) NA NA
DBSCAN-SWA_101 1470216 : 1474548 5 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_102 1483858 : 1488944 4 Planktothrix_phage(100.0%) tRNA NA
DBSCAN-SWA_103 1498325 : 1501117 2 Prochlorococcus_phage(50.0%) NA NA
DBSCAN-SWA_104 1504413 : 1504905 1 Fowlpox_virus(100.0%) NA NA
DBSCAN-SWA_105 1508807 : 1509701 1 Mollivirus(100.0%) NA NA
DBSCAN-SWA_106 1514122 : 1515588 2 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_107 1524027 : 1532417 7 Planktothrix_phage(33.33%) NA NA
DBSCAN-SWA_108 1550745 : 1595766 37 Sulfolobus_islandicus_filamentous_virus(28.57%) tRNA,transposase,protease NA
DBSCAN-SWA_109 1601103 : 1602822 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_110 1609936 : 1611469 1 Tupanvirus(100.0%) tRNA NA
DBSCAN-SWA_111 1620429 : 1624547 3 Pneumococcus_phage(33.33%) protease NA
DBSCAN-SWA_112 1628666 : 1634612 4 uncultured_Caudovirales_phage(50.0%) NA NA
DBSCAN-SWA_113 1638914 : 1643980 4 Staphylococcus_phage(50.0%) transposase NA
DBSCAN-SWA_114 1649905 : 1650715 1 Indivirus(100.0%) NA NA
DBSCAN-SWA_115 1661359 : 1661941 1 Vibrio_phage(100.0%) NA NA
DBSCAN-SWA_116 1669483 : 1671958 1 Myeloproliferative_sarcoma_virus(100.0%) NA NA
DBSCAN-SWA_117 1692909 : 1694199 1 Powai_lake_megavirus(100.0%) NA NA
DBSCAN-SWA_118 1707558 : 1710138 1 Cronobacter_phage(100.0%) NA NA
DBSCAN-SWA_119 1715577 : 1719266 3 Yellowstone_lake_phycodnavirus(50.0%) NA NA
DBSCAN-SWA_120 1738403 : 1740569 2 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_121 1762706 : 1766262 2 Mycobacterium_phage(50.0%) transposase NA
DBSCAN-SWA_122 1771737 : 1773366 1 Microcystis_phage(100.0%) NA NA
DBSCAN-SWA_123 1777509 : 1779192 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_124 1785369 : 1789628 2 Vibrio_phage(50.0%) holin NA
DBSCAN-SWA_125 1800563 : 1802090 1 Acinetobacter_phage(100.0%) NA NA
DBSCAN-SWA_126 1806244 : 1809955 2 Gordonia_phage(50.0%) NA NA
DBSCAN-SWA_127 1814323 : 1817673 3 Macacine_betaherpesvirus(50.0%) NA NA
DBSCAN-SWA_128 1827001 : 1827742 1 Paramecium_bursaria_Chlorella_virus(100.0%) NA NA
DBSCAN-SWA_129 1832443 : 1833706 1 uncultured_Mediterranean_phage(100.0%) tRNA NA
DBSCAN-SWA_130 1850718 : 1851315 1 Bacillus_thuringiensis_phage(100.0%) NA NA
DBSCAN-SWA_131 1857375 : 1857729 1 Mycobacterium_phage(100.0%) NA NA
DBSCAN-SWA_132 1863270 : 1864014 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_133 1867921 : 1869235 1 Mycobacterium_phage(100.0%) transposase NA
DBSCAN-SWA_134 1875781 : 1877230 1 Enterobacteria_phage(100.0%) NA NA
DBSCAN-SWA_135 1889370 : 1895618 6 Gordonia_phage(50.0%) NA NA
DBSCAN-SWA_136 1899663 : 1906386 5 Stenotrophomonas_phage(50.0%) tRNA NA
DBSCAN-SWA_137 1912121 : 1913564 1 Mycobacterium_phage(100.0%) tRNA NA
DBSCAN-SWA_138 1921725 : 1928220 6 Orpheovirus(25.0%) NA NA
DBSCAN-SWA_139 1934476 : 1939873 4 Mycobacterium_phage(50.0%) NA NA
DBSCAN-SWA_140 1943602 : 1946206 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_141 1950044 : 1954303 3 Acinetobacter_phage(33.33%) NA NA
DBSCAN-SWA_142 1964688 : 1966062 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_143 1969724 : 1972982 4 Rhodococcus_phage(50.0%) NA NA
DBSCAN-SWA_144 1981356 : 1983660 1 Leptospira_phage(100.0%) NA NA
DBSCAN-SWA_145 1987036 : 1989454 1 Klosneuvirus(100.0%) NA NA
DBSCAN-SWA_146 1996500 : 1998198 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_147 2013627 : 2014806 1 Bathycoccus_sp._RCC1105_virus(100.0%) NA NA
DBSCAN-SWA_148 2024310 : 2025814 2 Planktothrix_phage(50.0%) NA NA
DBSCAN-SWA_149 2029515 : 2030802 1 Geobacillus_virus(100.0%) NA NA
DBSCAN-SWA_150 2035287 : 2039449 3 Klosneuvirus(33.33%) NA NA
DBSCAN-SWA_151 2056208 : 2056991 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_152 2063081 : 2064221 1 Pacmanvirus(100.0%) NA NA
DBSCAN-SWA_153 2076819 : 2078199 1 Bacillus_phage(100.0%) transposase NA
DBSCAN-SWA_154 2081716 : 2085865 4 uncultured_Mediterranean_phage(33.33%) tRNA NA
DBSCAN-SWA_155 2094285 : 2104388 6 uncultured_virus(33.33%) NA NA
DBSCAN-SWA_156 2124491 : 2127372 3 uncultured_Caudovirales_phage(50.0%) NA NA
DBSCAN-SWA_157 2130957 : 2132334 1 Staphylococcus_phage(100.0%) transposase NA
DBSCAN-SWA_158 2151715 : 2155464 3 Planktothrix_phage(50.0%) NA NA
DBSCAN-SWA_159 2168284 : 2209817 41 Bacillus_phage(33.33%) integrase,protease,capsid,holin,transposase attL 2174879:2174924|attR 2183770:2183815
DBSCAN-SWA_160 2218001 : 2227200 7 Lake_Baikal_phage(25.0%) NA NA
DBSCAN-SWA_161 2230291 : 2237117 4 Tupanvirus(33.33%) NA NA
DBSCAN-SWA_162 2245386 : 2246802 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_163 2270583 : 2272419 1 Hepacivirus(100.0%) NA NA
DBSCAN-SWA_164 2275433 : 2277440 2 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_165 2280934 : 2281744 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_166 2290981 : 2293573 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_167 2300154 : 2302835 3 Escherichia_phage(66.67%) NA NA
DBSCAN-SWA_168 2310460 : 2311204 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_169 2324564 : 2325650 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_170 2329707 : 2330367 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_171 2342038 : 2343415 1 Staphylococcus_phage(100.0%) transposase NA
DBSCAN-SWA_172 2350634 : 2364705 7 uncultured_Mediterranean_phage(25.0%) NA NA
DBSCAN-SWA_173 2375706 : 2376972 1 Salmonella_phage(100.0%) NA NA
DBSCAN-SWA_174 2382902 : 2387000 3 Emiliania_huxleyi_virus(50.0%) NA NA
DBSCAN-SWA_175 2399153 : 2405843 3 Mycobacterium_phage(50.0%) protease NA
DBSCAN-SWA_176 2409659 : 2411582 1 Gordonia_phage(100.0%) NA NA
DBSCAN-SWA_177 2424104 : 2425979 1 Paramecium_bursaria_Chlorella_virus(100.0%) NA NA
DBSCAN-SWA_178 2430303 : 2431917 1 Yellowstone_lake_mimivirus(100.0%) tRNA NA
DBSCAN-SWA_179 2435373 : 2442041 7 uncultured_virus(40.0%) tRNA NA
DBSCAN-SWA_180 2452916 : 2458384 3 Planktothrix_phage(50.0%) NA NA
DBSCAN-SWA_181 2465130 : 2466507 1 Staphylococcus_phage(100.0%) transposase NA
DBSCAN-SWA_182 2482651 : 2483695 1 Streptomyces_phage(100.0%) NA NA
DBSCAN-SWA_183 2489077 : 2490468 2 Ralstonia_phage(50.0%) NA NA
DBSCAN-SWA_184 2495214 : 2506611 8 Bacillus_phage(20.0%) NA NA
DBSCAN-SWA_185 2511527 : 2513282 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_186 2534288 : 2537765 3 Enterobacteria_phage(33.33%) transposase NA
DBSCAN-SWA_187 2544391 : 2549002 4 Bacillus_phage(66.67%) NA NA
DBSCAN-SWA_188 2565216 : 2572070 7 Rhizobium_phage(25.0%) NA NA
DBSCAN-SWA_189 2577614 : 2643604 52 Bacillus_phage(30.0%) tRNA,transposase,protease,bacteriocin NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage