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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP022066 Salmonella enterica strain FDAARGOS_313 plasmid unnamed1, complete sequence 0 crisprs NA 0 0 0 0
CP022067 Salmonella enterica strain FDAARGOS_313 plasmid unnamed2, complete sequence 0 crisprs NA 0 0 0 0
CP022068 Salmonella enterica strain FDAARGOS_313 plasmid unnamed3, complete sequence 0 crisprs NA 0 0 3 0
CP022069 Salmonella enterica strain FDAARGOS_313 chromosome, complete genome 0 crisprs DEDDh,WYL,DinG,csa3,cas3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK 0 0 10 0

Results visualization

1. CP022068
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 3929 2 Mannheimia_phage(50.0%) NA NA
DBSCAN-SWA_2 8115 : 13854 5 Enterobacteria_phage(60.0%) transposase NA
DBSCAN-SWA_3 18040 : 19641 2 Enterobacteria_phage(100.0%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. CP022069
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1017639 : 1067343 74 Salmonella_phage(69.01%) integrase,head,terminase,lysis,tail,protease attL 1017580:1017625|attR 1068323:1068368
DBSCAN-SWA_2 1293042 : 1334157 67 Salmonella_phage(62.3%) integrase,portal,coat,terminase,lysis,tail,protease attL 1292953:1292977|attR 1334426:1334450
DBSCAN-SWA_3 1458655 : 1465966 8 Dickeya_phage(16.67%) integrase,protease attL 1459906:1459920|attR 1471338:1471352
DBSCAN-SWA_4 1516608 : 1607264 100 Salmonella_phage(42.37%) holin,portal,transposase,head,terminase,lysis,tRNA,capsid,tail,protease NA
DBSCAN-SWA_5 2429359 : 2472370 41 Salmonella_phage(27.27%) transposase,tail,protease NA
DBSCAN-SWA_6 2623437 : 2634091 13 Morganella_phage(25.0%) NA NA
DBSCAN-SWA_7 2723457 : 2733964 10 Enterobacteria_phage(37.5%) NA NA
DBSCAN-SWA_8 2821308 : 2830479 10 Enterobacteria_phage(66.67%) tRNA NA
DBSCAN-SWA_9 4666775 : 4729534 74 Salmonella_phage(58.54%) holin,integrase,portal,head,terminase,lysis,plate,tRNA,capsid,tail attL 4699672:4699718|attR 4729696:4729742
DBSCAN-SWA_10 4879112 : 4897267 23 Burkholderia_phage(40.0%) plate,tail NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage