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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP034133 Klebsiella quasipneumoniae strain G4584 plasmid pG4584_52.4Kb, complete sequence 0 crisprs NA 0 0 1 0
CP034135 Klebsiella quasipneumoniae strain G4584 plasmid pG4584_3.7Kb, complete sequence 0 crisprs NA 0 0 0 0
CP034131 Klebsiella quasipneumoniae strain G4584 plasmid pG4584_136.4Kb, complete sequence 0 crisprs NA 0 0 2 0
CP034134 Klebsiella quasipneumoniae strain G4584 plasmid pG4584_6.9Kb, complete sequence 0 crisprs NA 0 0 0 0
CP034130 Klebsiella quasipneumoniae strain G4584 plasmid pG4584_218.9Kb, complete sequence 0 crisprs csa3 0 0 2 0
CP034132 Klebsiella quasipneumoniae strain G4584 plasmid pG4584_81.9Kb, complete sequence 0 crisprs csa3 0 0 1 0
CP034129 Klebsiella quasipneumoniae strain G4584 chromosome, complete genome 0 crisprs csa3,RT,cas3,DEDDh,DinG,WYL 0 0 12 0

Results visualization

1. CP034131
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1645 : 58646 50 Escherichia_phage(43.48%) transposase,integrase NA
DBSCAN-SWA_2 67643 : 74638 7 Escherichia_phage(50.0%) integrase attL 66044:66056|attR 72743:72755
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. CP034130
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 13277 : 133551 110 uncultured_Caudovirales_phage(20.69%) transposase,integrase attL 73553:73571|attR 107628:107646
DBSCAN-SWA_2 140986 : 175037 26 Escherichia_phage(33.33%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
3. CP034133
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1332 : 10632 12 Salmonella_phage(16.67%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
4. CP034132
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 2365 : 56713 50 Escherichia_phage(26.67%) integrase,transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
5. CP034129
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 437776 : 507379 72 uncultured_Caudovirales_phage(58.82%) protease,head,capsid,integrase,tRNA,tail,terminase,portal attL 451908:451925|attR 508506:508523
DBSCAN-SWA_2 648823 : 687541 47 Erwinia_phage(28.21%) plate,head,capsid,integrase,tRNA,lysis,tail,terminase,portal,holin attL 639920:639936|attR 675971:675987
DBSCAN-SWA_3 1158177 : 1216585 72 Pseudomonas_phage(43.24%) plate,head,tRNA,transposase,tail NA
DBSCAN-SWA_4 1343960 : 1388813 67 Salmonella_phage(26.42%) tail,coat,terminase,holin NA
DBSCAN-SWA_5 1455312 : 1522665 74 Salmonella_phage(29.41%) protease,integrase,transposase,tail,terminase,holin attL 1458005:1458020|attR 1518104:1518119
DBSCAN-SWA_6 1590905 : 1638203 70 Cronobacter_phage(22.41%) coat,terminase,head,holin NA
DBSCAN-SWA_7 1871491 : 1878417 6 Planktothrix_phage(33.33%) NA NA
DBSCAN-SWA_8 1922349 : 1941089 16 Enterobacteria_phage(28.57%) NA NA
DBSCAN-SWA_9 2862150 : 2873036 9 Escherichia_phage(87.5%) NA NA
DBSCAN-SWA_10 2894317 : 2988767 102 Enterobacteria_phage(20.83%) protease,head,capsid,integrase,transposase,tail,terminase,portal,holin attL 2939237:2939253|attR 2995262:2995278
DBSCAN-SWA_11 3574944 : 3584406 8 Brazilian_cedratvirus(16.67%) tRNA,protease NA
DBSCAN-SWA_12 3630605 : 3666197 53 Klebsiella_phage(20.93%) protease,head,capsid,tail,terminase,portal,holin NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage