CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP024109	Bacillus cytotoxicus strain CH_13 chromosome, complete genome	3 crisprs	cas3,csa3,DinG,cas2,cas4,cas5,cas7,cas8b2,cas6,DEDDh,cas14j,WYL	0	6	6	0
CP024110	Bacillus cytotoxicus strain CH_13 plasmid pCh13_79, complete sequence	0 crisprs	TnsE_C	0	0	0	0

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: CP024109_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP024109_1

1534864-1534992

Orphan

Consensus_repeat	Method
AACTAGGGTGGTACCGCGATGTTTTAATCGTCCCTACG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP024109_1

>merge|CP024109|1|1534864-1534992|CRISPRCasFinder
AACTAGGGTGGTACCGCGATGTTTTAATCGTCCCTACGTATTTGCGTAGGGGCGTTTTTTATTGAAGGTCCTACTGTCGTTGTGTCTTCATAACTAGGGTGGTACCGCGATATTTTAATCGTCCCTACG

>CP024109|1|1|1534864-1534992|CRISPRCasFinder
AACTAGGGTGGTACCGCGATGTTTTAATCGTCCCTACG	TATTTGCGTAGGGGCGTTTTTTATTGAAGGTCCTACTGTCGTTGTGTCTTCAT
AACTAGGGTGGTACCGCGATATTTTAATCGTCCCTACG

Protein	Signature genes	Signature genes Name	Protein_function
CP024109.1\|AWC44446.1\|1521774_1523151_+\|N-acetylmuramoyl-L-alanine-amidase	unknown	unknown	gnl\|CDD\|226656
CP024109.1\|AWC44448.1\|1524178_1524991_+\|UDP-galactose-lipid-carrier-transferase	unknown	unknown	gnl\|CDD\|274736
CP024109.1\|AWC44460.1\|1540626_1540725_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378838
CP024109.1\|AWC44462.1\|1542766_1544029_+\|threonine-dehydratase	unknown	unknown	gnl\|CDD\|236318
CP024109.1\|AWC44447.1\|1523206_1523671_-\|hypothetical-protein	unknown	unknown	unknown
CP024109.1\|AWC46853.1\|1521018_1521207_-\|hypothetical-protein	unknown	unknown	unknown
CP024109.1\|AWC44454.1\|1532820_1534455_-\|polysaccharide-biosynthesis-protein	unknown	unknown	gnl\|CDD\|240529
CP024109.1\|AWC44464.1\|1548177_1549626_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340924
CP024109.1\|AWC44455.1\|1535095_1536433_+\|sodium-dependent-transporter	unknown	unknown	gnl\|CDD\|271367
CP024109.1\|AWC44458.1\|1537773_1538310_-\|peptide-methionine-(S)-S-oxide-reductase	unknown	unknown	gnl\|CDD\|376578
CP024109.1\|AWC44463.1\|1544250_1544970_+\|DUF554-domain-containing-protein	unknown	unknown	gnl\|CDD\|377371
CP024109.1\|AWC44449.1\|1525489_1526749_+\|GTPase-HflX	unknown	unknown	gnl\|CDD\|274455
CP024109.1\|AWC44456.1\|1536704_1536971_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|337191
CP024109.1\|AWC44450.1\|1527080_1528649_+\|Vga-family-ABC-F-type-ribosomal-protection-protein	unknown	unknown	gnl\|CDD\|223562
CP024109.1\|AWC44461.1\|1541059_1542733_+\|dihydroxy-acid-dehydratase	unknown	unknown	gnl\|CDD\|234861
CP024109.1\|AWC44451.1\|1528751_1530392_-\|peptide-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|173869
CP024109.1\|AWC44459.1\|1539228_1540128_+\|branched-chain-amino-acid-aminotransferase	unknown	unknown	gnl\|CDD\|183549
CP024109.1\|AWC44457.1\|1537110_1537749_+\|elongation-factor-G-binding-protein	unknown	unknown	gnl\|CDD\|319974
CP024109.1\|AWC44452.1\|1530609_1531818_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|341031
CP024109.1\|AWC44453.1\|1531833_1532751_+\|cysteine-synthase-A	unknown	unknown	gnl\|CDD\|273465

Protein	Function_ID	Function_description	E-value
CP024109.1\|AWC44446.1\|1521774_1523151_+\|N-acetylmuramoyl-L-alanine-amidase	gnl\|CDD\|226656	COG4193, LytD, Beta- N-acetylglucosaminidase [Carbohydrate transport and metabolism].	1.27967e-24
CP024109.1\|AWC44448.1\|1524178_1524991_+\|UDP-galactose-lipid-carrier-transferase	gnl\|CDD\|274736	TIGR03708, poly_P_AMP_trns, polyphosphate:AMP phosphotransferase. Members of this protein family contain a domain duplication. The characterized member from Acinetobacter johnsonii is polyphosphate:AMP phosphotransferase (PAP), which can transfer the terminal phosphate from poly(P) to AMP, yielding ADP. In the opposite direction, this enzyme can synthesize poly(P). Each domain of this protein family is homologous to polyphosphate kinase, an enzyme that can run in the forward direction to extend a polyphosphate chain with a new terminal phosphate from ATP, or in reverse to make ATP (or GTP) from ADP (or GDP). [Central intermediary metabolism, Phosphorus compounds].	1.35596e-112
CP024109.1\|AWC44460.1\|1540626_1540725_+\|hypothetical-protein	gnl\|CDD\|378838	pfam12323, HTH_OrfB_IS605, Helix-turn-helix domain. This is the N terminal helix-turn-helix domain of Transposase_2 pfam01385.	0.000629588
CP024109.1\|AWC44462.1\|1542766_1544029_+\|threonine-dehydratase	gnl\|CDD\|236318	PRK08639, PRK08639, threonine dehydratase; Validated.	0
CP024109.1\|AWC44454.1\|1532820_1534455_-\|polysaccharide-biosynthesis-protein	gnl\|CDD\|240529	cd13124, MATE_SpoVB_like, Stage V sporulation protein B, also known as Stage III sporulation protein F, and related proteins. The integral membrane protein SpoVB has been implicated in the biosynthesis of the peptidoglycan component of the spore cortex in Bacillus subtilis. This model represents a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins. Proteins from the MATE family are involved in exporting metabolites across the cell membrane and are often responsible for multidrug resistance (MDR).	3.14857e-129
CP024109.1\|AWC44464.1\|1548177_1549626_+\|MFS-transporter	gnl\|CDD\|340924	cd17366, MFS_ProP, Proline/betaine transporter of the Major Facilitator Superfamily of transporters. This subfamily is composed of Escherichia coli proline/betaine transporter, also called proline porter II (PPII), and similar proteins. ProP is a proton symporter that senses osmotic shifts and responds by importing osmolytes such as proline, glycine betaine, stachydrine, pipecolic acid, ectoine and taurine. It is both an osmosensor and an osmoregulator which is available to participate early in the bacterial osmoregulatory response. The ProP subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	0
CP024109.1\|AWC44455.1\|1535095_1536433_+\|sodium-dependent-transporter	gnl\|CDD\|271367	cd10336, SLC6sbd_Tyt1-Like, solute carrier 6 subfamily, Fusobacterium nucleatum Tyt1-like; solute-binding domain. SLC6 proteins (also called the sodium- and chloride-dependent neurotransmitter transporter family or Na+/Cl--dependent transporter family) include neurotransmitter transporters (NTTs): these are sodium- and chloride-dependent plasma membrane transporters for the monoamine neurotransmitters serotonin (5-hydroxytryptamine), dopamine, and norepinephrine, and the amino acid neurotransmitters GABA and glycine. These NTTs are widely expressed in the mammalian brain, involved in regulating neurotransmitter signaling and homeostasis, and the target of a range of therapeutic drugs for the treatment of psychiatric diseases. Bacterial members of the SLC6 family include the LeuT amino acid transporter. An arrangement of 12 transmembrane (TM) helices appears to be as a common topological motif for eukaryotic and some prokaryotic and archaeal NTTs. However, this subfamily which contains the majority of bacterial members and some archaeal members, appears to contain only 11 TMs; for example the functional Fusobacterium nucleatum tyrosine transporter Tyt1.	0
CP024109.1\|AWC44458.1\|1537773_1538310_-\|peptide-methionine-(S)-S-oxide-reductase	gnl\|CDD\|376578	pfam01625, PMSR, Peptide methionine sulfoxide reductase. This enzyme repairs damaged proteins. Methionine sulfoxide in proteins is reduced to methionine.	4.36886e-93
CP024109.1\|AWC44463.1\|1544250_1544970_+\|DUF554-domain-containing-protein	gnl\|CDD\|377371	pfam04474, DUF554, Protein of unknown function (DUF554). Family of uncharacterized prokaryotic proteins. Multiple predicted transmembrane regions suggest that the region is membrane associated.	5.0023e-73
CP024109.1\|AWC44449.1\|1525489_1526749_+\|GTPase-HflX	gnl\|CDD\|274455	TIGR03156, GTP_HflX, GTP-binding protein HflX. This protein family is one of a number of homologous small, well-conserved GTP-binding proteins with pleiotropic effects. Bacterial members are designated HflX, following the naming convention in Escherichia coli where HflX is encoded immediately downstream of the RNA chaperone Hfq, and immediately upstream of HflKC, a membrane-associated protease pair with an important housekeeping function. Over large numbers of other bacterial genomes, the pairing with hfq is more significant than with hflK and hlfC. The gene from Homo sapiens in this family has been named PGPL (pseudoautosomal GTP-binding protein-like). [Unknown function, General].	0
CP024109.1\|AWC44456.1\|1536704_1536971_+\|hypothetical-protein	gnl\|CDD\|337191	pfam08765, Mor, Mor transcription activator family. Mor (Middle operon regulator) is a sequence specific DNA binding protein. It mediates transcription activation through its interactions with the C-terminal domains of the alpha and sigma subunits of bacterial RNA polymerase. The N terminal region of Mor is the dimerization region, and the C terminal contains a helix-turn-helix motif which binds DNA.	0.00419013
CP024109.1\|AWC44450.1\|1527080_1528649_+\|Vga-family-ABC-F-type-ribosomal-protection-protein	gnl\|CDD\|223562	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only].	1.18883e-113
CP024109.1\|AWC44461.1\|1541059_1542733_+\|dihydroxy-acid-dehydratase	gnl\|CDD\|234861	PRK00911, PRK00911, dihydroxy-acid dehydratase; Provisional.	0
CP024109.1\|AWC44451.1\|1528751_1530392_-\|peptide-ABC-transporter-substrate-binding-protein	gnl\|CDD\|173869	cd08504, PBP2_OppA, The substrate-binding component of an ABC-type oligopetide import system contains the type 2 periplasmic binding fold. This family represents the periplasmic substrate-binding component of an ATP-binding cassette (ABC)-type oligopeptide transport system comprised of 5 subunits. The transport system OppABCDEF contains two homologous integral membrane proteins OppB and OppF that form the translocation pore; two homologous nucleotide-binding domains OppD and OppF that drive the transport process through binding and hydrolysis of ATP; and the substrate-binding protein or receptor OppA that determines the substrate specificity of the transport system. The dipeptide (DppA) and oligopeptide (OppA) binding proteins differ in several ways. The DppA binds dipeptides and some tripeptides and is involved in chemotaxis toward dipeptides, whereas the OppA binds peptides of a wide range of lengths (2-35 amino acid residues) and plays a role in recycling of cell wall peptides, which precludes any involvement in chemotaxis. Most of other periplasmic binding proteins are comprised of only two globular subdomains corresponding to domains I and III of the dipeptide/oligopeptide binding proteins. The structural topology of these domains is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the ligand-binding domains from ionotropic glutamate receptors, LysR-type transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	0
CP024109.1\|AWC44459.1\|1539228_1540128_+\|branched-chain-amino-acid-aminotransferase	gnl\|CDD\|183549	PRK12479, PRK12479, branched-chain-amino-acid transaminase.	0
CP024109.1\|AWC44457.1\|1537110_1537749_+\|elongation-factor-G-binding-protein	gnl\|CDD\|319974	cd16342, FusC_FusB, Fusidic acid resistance protein (FusC/FusB). The fusidic acid resistance protein FusC (FusB) mediates resistance to the antibiotic fusidic acid. Its C-terminal domain, which contains a zinc-binding site, interacts with EF-G with high affinity, promoting the dissociation of stalled ribosome#EF-G#GDP complexes that form in the presence of fusidic acid, thus allowing the ribosomes to resume translation.	2.03194e-116
CP024109.1\|AWC44452.1\|1530609_1531818_+\|MFS-transporter	gnl\|CDD\|341031	cd17478, MFS_FsR, Fosmidomycin resistance protein of the Major Facilitator Superfamily of transporters. Fosmidomycin resistance protein (FsR) confers resistance against fosmidomycin. It shows sequence similarity with the bacterial drug-export proteins that mediate resistance to tetracycline and chloramphenicol. This FsR family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.4256e-102
CP024109.1\|AWC44453.1\|1531833_1532751_+\|cysteine-synthase-A	gnl\|CDD\|273465	TIGR01139, Cysteine_synthase, cysteine synthase A. This model distinguishes cysteine synthase A (CysK) from cysteine synthase B (CysM). CysM differs in having a broader specificity that also allows the use of thiosulfate to produce cysteine thiosulfonate. [Amino acid biosynthesis, Serine family].	1.17556e-161

>CP024109.1|AWC44454.1|1532820_1534455_-|polysaccharide-biosynthesis-protein
MSTSKVLKGTALLSGATMISRILGFIYFFPFQLLVGTQGVALYGYAYSWYGILLSFSTAGIPIAVSKFVAKYNALGDYSTSKKLYNSSVKLMLLMGFSGFFILFIGAPYISQFIIRSKAPDPKFIADVTLTMRALSFALIIVPAMSVTRGYFQGFQHMKPSAVSQVVEQIARVVFILVGSFVVTKLLGGSVASSVAVATFGAAVGAIASVSILIMYWKKYNHLKPPKGELKSRASTLPLKSIYMELLRYAIPIVFVGIAIPLYTLVDQYTVADALRALGEPLTTANAVFAYIANYAQKLIMIPASLATGFSLTIIPAITKSFTSGKQEELQEQITKIFQVLLFFTIPAAFGLASIAYDAFRMVYVSHDIAVGGSQYLISYAPSAVLSAIFTVSAAILQGIDYQRKTMIAFSVGILVKLIVNTPLLYVLGGHGAVLGTILGYLVSDAIMLYCIVKFAKFDIKETIKTVCLIIIYSGAMSAIVMALKAMIGWFIPGQSYIESLLIVIICGVVGGFVYLLFVLTSGLASRILGNRIQRLPILGKFIK
>CP024109.1|AWC44453.1|1531833_1532751_+|cysteine-synthase-A
MKLCKNVTELIGDTPVVRLSKFVPKDAADVYVKLEMFNPSRSVKDRAAYHLIHVAEEQGFIQPGDTIIEPTSGNTGIGLAMNAAAKGYKAILIMPDNMSKERMNLLKAYGAEVILTPAEQRMPGAIAKAIELQKQIPNSFIPQQFENPANPNIHRYTTALEIYEQMEGKLDAFVATAGTGGTITGTGETLKEKLPNLHIVVVEPKGSPVLSGGVPGPHKLVGTSPGFIPKNLNTEIYNEIIQIADEEALSTMRNLAKQEGLLVGPSSGASVYAAIMIAKRLGAGKKVLCIAPDTGERYLSMGLFE
>CP024109.1|AWC44452.1|1530609_1531818_+|MFS-transporter
MQAISKENVVTTPTIYRILFAISFGHFLNDSMQAVVPALFPILEKTMNLSYMQVGWIAFALNMTSSVMQPVFGMYSDKKPSPFLLPLGMFSSMLGMIGLAFAPNFIIVIISVLFIGLGSAVFHPEGARVAYMASGTKRGLAQAIYQVGGNTGNSLAPIFTAVIFVPLGQKGSLGFTAFAAVGILLLMYVSKWYKNELVSGAVKSKKRAALEAENAIVSAHIKFVIVLLIFLTFVRSWYGAGIGNFYQFYLIEHYGLSIKNAQYFVFAFMISGVLGTFFGGPLADRFGKKNIIVFSMLGSAPLALLLPHVSLLWVVPLFLCIGFISSSSFSVIVVYAQELVPGKVGMVSGLIVGLAFGLGALGAVVLGKLADIYSLQFIMVLCSCLPLIGLTSWLLPSDKKSV
>CP024109.1|AWC44451.1|1528751_1530392_-|peptide-ABC-transporter-substrate-binding-protein
MKKKTKRVAALSLTLSLVLTACGQKQETTTNKDEKKVATKQILNIVETGEISTLDSSIATDGFSYAALNNVMEGLYMPGPGNKPVPGAAESYTLSEDGKTYIFKLRHSNWSNGDPVTAHDFEYAWKRAINPETASEYAHIMFDIKNAEKVNKKALPLDSFGVKALDDKTLEVQLEHPVPYFLGLMGFATFYPQNQKVVEAQGTNYGLEAANAVYNGPFVLNEWKHDTSYKMTKNPNYWDHKNVKLQEINVNIVKDTSAAVNLFESKQVDRITINSEFVDKYQNDPSLKKMARPSVTFFRLNQKNPLLANKNARKAISLSFDKKGITTTILNNGSIPANAFIPKGFVKGPDNKDFRSTSNVKVETNIKEAKKQWETAKKETNLQNVSLSIISTDESNDKKISEYLKGELEKNLPGLKITLNPLPVKAFLEREGNGDFEISLSTWGPDYPDPTTFLNMFVTDGPFNKMNYSNKQYDELMEKASSSLTTDLPARWKAFQDAEKILVEDDAAIAPIFQAGLIYLERPSVKGVVVRPFAGIYSYKWAYITE
>CP024109.1|AWC44450.1|1527080_1528649_+|Vga-family-ABC-F-type-ribosomal-protection-protein
MLLLEANRIKYYIQDRLLLDIDQLQIHQNARIGLVGRNGSGKTTLFQILAKEIVPEEGSIVQRVRCELLPQLKQTDTTKSGGEVTQEYIQKAVLKDPELLLADEPTTNLDTGHIEWLEKKLGNWKGAFVIISHDRAFLDALCTTIWELDEGKIKVYTGNYSEYVKQKEIERQQEQLAYEKYEKKKKQLEEAVKLKEKKAERATKTPKKEGKLEPKITKPYFAKKQKKLQKTATAMITRLEKLGKVEKVKELPPLKMDLPNAETFKNRIILRVNDRIGKVGKRVLWKKASFHIRGGDKLAIIGANGSGKTTLVKQIMNQEYGIRFSPAVKVGYFSQNLNILDPAKSIIENVQSSSKQNETLIRTVLARMHFFREDVYKLVEVLSGGERVKVALTKLFLSDINTLILDEPTNFLDMTAVEALESLLKEYEGSVIFVSHDRRFIENIATRILTIHNQELGLFEGTYQQYKRTQVQQAQERKKDTRLLLETKLSEVLSRLSIEPSEKLEREFEKLLQEKRELDASE
>CP024109.1|AWC44449.1|1525489_1526749_+|GTPase-HflX
MEEFVQRAILVGVNLGHESDFQYSMEELANLAEACDVEVVGQVTQNLQRVNPSHYIGTGKIGEVAAYVKEVDANIVIFNDELSPSQIRNLEKDLDCKVIDRTILILDIFAQRAKTKEAQLQVEVAHLQYMMPRLVGLRESLGRQSGGVGTKNKGVGEKKLELDRRKIEEQISVLNKELEALVVQRKTQRKQRKKNEIPVVALVGYTNAGKSTTMNAMLEIFNGTIEKQVFEKDMLFATLETSVRNIELPDNKSFLLTDTVGFVSKLPHHLVKAFRSTLEEVAEADLLIHVVDYSNPNYEQLIEITNQTLKQIGVENIPTIYAYNKSDMMDVEIPKTKKDRVYLSAKKQIGMEELVEMIRSHIYKEYTKCEMLIPYDQGQIVSYFNEYAHVICTSYENEGTKLSLECKISDFEKYKRFAI
>CP024109.1|AWC44448.1|1524178_1524991_+|UDP-galactose-lipid-carrier-transferase
MKKEWLANVDLTKKIDSKSKYNKKLKKYQRHLLALQQILKEEKVAVIMVMEGWDAAGKGGAIKRVTEHLDPRGFQVKPIAAPAPHEKRYHYLQRFWREIPRYGQIAIFDRSWYGRVLVERVEGFATQEEWARAYDEINDFEKVLTDDHYIIGKFFYHMSKDEQLKRFKERENNPLKRWKITDEDWRNREKWDEYVEAMEEMFEKTNQPNAKWHIIASNNKLYARVKTLKVMISLIEDYFLEHGIELPSYYYEIKAEQQEEFEIVQDVSMK
>CP024109.1|AWC44447.1|1523206_1523671_-|hypothetical-protein
MKRKIFFLLTLLCIVLPIQVSAFTFQELPVASKSKQWYIEIDKSYNSNKQAIQPKQGVYDTYSLFVKNIGKDVSNVSIEIVGNDPSAKTTFKPTVPHTNVSKSHTSFDYMVFPLYFTSHTFKVIMTWEEKEFTYNGHPESKSKKMKQTFIFTEE
>CP024109.1|AWC44446.1|1521774_1523151_+|N-acetylmuramoyl-L-alanine-amidase
MKKVISNVLAMTAALQVIMVPTTSFAAEKGFSDVPKSHWAYEAINDLANRNIIAGYDNGKFGLGDSVTREQVAALIYRALKPEAKAEYKNPYHDVSASTTMFPNEILALTEMGIFTGDENKNFRPKDSLTRAEMAMILQRAYHLKVKANHTFHDVDPNSWAKDAISALQSNGMAEGDGTGAFYPSKTVTREEYAQFLFNAEQSYLNLDLTLASNVTAEEIDNFLKKSRSDSPLIGHGQDFIAAQNEHGVNALYLAAHAILESGYGRSEIAYRKHNLFGLRAYDRDPFYHAKYLPTYRDSISYNANYVRERYLEKGAIYYNGPTLVGMNVKYASDPEWAGKIAGLMERIKPFDRNDYKNANRLPKNPHTLDVEALGNEIPYKDLGNREIAVQASGKYYKVPYPYDLKIKSIPDITQNEMGTLTNGSKVTVHREDPNGWVEFSMKDKQEKYWTLKSNLKM
>CP024109.1|AWC46853.1|1521018_1521207_-|hypothetical-protein
MPKSINFSAFIDWGCFRIETELSYIQTCIYEELSTKKRYHVYTDIPFLAIFLLAPFSVSLFL
>CP024109.1|AWC44455.1|1535095_1536433_+|sodium-dependent-transporter
MNSPQWTSKLGFVLAAAGSAIGLGAIWKFPYMAGIGGGGAFFLIFIGFTLLIGLPLLLAEFVIGRSTQKEAVDAYRQIAPKTLWPWLGKLGVVTCFILLSFYSVVGGWILLYLWNAITGRLWEGNGAYEATFGEIISNPYLAVGSQLLFILMTIFIVSKGVQNGVEKVNKYFMPALFVLFFILIIRALTLDGAGEGVRFFLQPDFSNVTSEIILYAMGQSFFSLSVGVAVMVTYSSYLPKEESLPRSAFSIVGLTLMITLLAGLAIFPVVFAFGMEPSQGPGLLFIVLPAIFSKMAFGKVFFVIFLLLFFFATVTSAISMLEISVASLTAKGNGRREKFAIIVGLLIFVVGIPSALSYGVLSDFKVFGKTVFDLADFAVSNVLMPLGVLLVSIFVPLKMKKDVLMRELGVSKHKGYTLFILWLFLLRYIAPVAIIIVFLNVIGVI
>CP024109.1|AWC44456.1|1536704_1536971_+|hypothetical-protein
MGYVKATAVLPESLIAEIQKYVQGETIYIPKQETEHYKWGTRSGGRKQIDMRNRKIKEAFENGIAIYQLAEEYFLSVETIKKIVYSKS
>CP024109.1|AWC44457.1|1537110_1537749_+|elongation-factor-G-binding-protein
MEAFIRSDQYNFIKSQTHILVHGHATANDRGVITALKSLAIEKVLHAFENLNSEQKELIETILAVENREDAEAFLLKLNPYVIPFQEVTPQALKKLFPKVKKLKLPEMEEVNMKEMSYLGWTDKGTGKRFIIAKKNNKLVGVQGTFQSINKKGICALCHGHEEVGMFLVEIKGDVPGTFVKKGNYICQDSIACNQNMTSLDKLHDFIERLKK
>CP024109.1|AWC44458.1|1537773_1538310_-|peptide-methionine-(S)-S-oxide-reductase
MSKKTFELATFAGGCFWCMVKPFDELPGIQKVVSGYTGGHISNPTYEQVKSGTSGHLEVVQMTFDPSIFPYQKLLDLYWSQIDPTDDGGQFFDRGPSYRTAIFYHNETQKELAEKSKQLLATSGIFNEPIVTEIRPAAPFYEAEEYHQHFYKKNPKKYAQERKESGREDFIKTNWQKK
>CP024109.1|AWC44459.1|1539228_1540128_+|branched-chain-amino-acid-aminotransferase
MKKQYIYMNGELVEKEKAVVSVYDHGFLYGDGVFEGIRSYGGNVFCLKEHVKRLYESAKSILLTIPMTVEEMEKAVVQTLQKNGYADAYIRLIVSRGKGDLGLDPRSCEKPSVIIIAEQLKLFPQEFYDNGLSVVSVASRRNMPDALDPRIKSMNYLNNVLVKIEAAQAGALEALMLNQQGYVCEGSGDNVFVVKDGKVVTPPSYLGALEGVTRNSVIELCDKLGIPCEERPFTRHDVYVADEVFLTGTAAELIPVVKVDAREIGDGKPGEVTKQLTEAFKRLTRERGVRVPGLAESLA
>CP024109.1|AWC44460.1|1540626_1540725_+|hypothetical-protein
MLVNKVYKFRIYPNKGQEILKQVVDVLQVNTS
>CP024109.1|AWC44461.1|1541059_1542733_+|dihydroxy-acid-dehydratase
MRSDMIKKGFDKAPHRSLLKATGLKDEDFHKPFVAICNSFIEIIPGHKHLNEFGRLVKEAVRAAGMVPFEFNTIGVDDGIAMGHIGMRYSLPSREIIADSVETVVNAHWFDGMICIPNCDKITPGMMMAAMRINIPTVFVSGGPMAAGKTSKGEVVDLSSVFEGVGAYQSGKISEEELKDIEDHGCPSCGSCSGMFTANSMNCLCEVLGLALPGNGSILATDSRREQLIQRAAESLKILMERDIKPRDIVTEEAIDDAFALDMAMGGSTNTVLHTLAIAQEAGLDYDMNRIDAVSRKVPHLCKVSPASNWHMEDIDRAGGMSAILKELSRKEGVLHFDRITVTGKTLRENIADAEIQDKEVIHSLENPHSQEGGLRILKGNLAKDGAVIKSGATEVKRFEGPCVIFNSQDEALAGIMLGKVKKGDVVVIRYEGPRGGPGMPEMLAPTSAIAGMGLGADVALLTDGRFSGASRGISVGHISPEAAAGGEIALLQQGDIVCIDVEERLLEVKVSDEELAKRRKEWKRPEPKVKTGWLGRYAQMVTSANTGAVLKMQNFD
>CP024109.1|AWC44462.1|1542766_1544029_+|threonine-dehydratase
MVHKVKERVKIEDILMAHNCLKDIVNKTPLQRDAVLSEKYKCEVYVKREDLQVIRSFKIRGAYNLIQSLSKEKLQNGVVCASAGNHAQGVAYTCNLLEIPANIFMPTTTPKQKVSQVKFFGGDVADIMLVGDTFDSSFQEAQRYCEENGMTFVHPFDDPHVIAGQGTVAVEILHDTEKTIDYVFTAIGGGGLASGIGTYVKGVSPNTKVIGVEPKGAASMKEAFLQNENVTLEMIDSFVDGAAVKKVGKLTFETCKDVLDDIVLVPEGKICTTILELYKKNAIVAEPAGALSIAALDFYKDEIKGKTVVCVLSGGNNDIDRMQEMKERSLIYEGIKHYFIIQFPQRSGALREFLDKGLGPEDDITRFEYIKKHNKENGPALVGVELKHKEDYEPLIARFKENHIQFLELNKNPVLFDLLT
>CP024109.1|AWC44463.1|1544250_1544970_+|DUF554-domain-containing-protein
MVILGAIVNGICIIIGTLLGKVLSNIPESMKGTVMHAIGLAVTVLGLRMGMKSEIFLIVILSLVIGSVVGEWLCLEEKLQKLGNWLEKKVGSKGEGSISVGFVTATLIFAIGAMGVLGALDSGIRGNHNVLYTKAIIDGFISLILTTTLGIGVLFSAVPVILYEGGIALFATKIDRFVPEQLMNQFIIEMTATGGIMIFAIGLNLLGFIKIKVANLLPGILVVGMIVSIIYGYNLFLLK
>CP024109.1|AWC44464.1|1548177_1549626_+|MFS-transporter
MQQRHNLDFGPQDVNIINPKQAKKAVVATGIGNMMEWFDFGLYAYLAVILSQLFFSNVHNSSLQLVLTFGTFAAAFLVRPIGGIFFGRIGDKYGRKVVLSTTIILMALSTLFIALLPTYEQIGIWAPIFLLVARIVQGFSTGGEYSGAMVYIAESSPDKKRGILGSGLEIGTLSGYIAASGIVTILTVLLTNEQMLSWGWRIPFLIAAPIGLVGLYLRRHLSESPVFQEMEKEKAQEEYKDDKQIPLIYILKYYKKDFLLSIVIVAFFNITNYMILSFIPSYLTQIVKMKETTGLIIISITMTLMIPLAFYFGKLSDKVGNKRVVQFGLLGLTLCSIPAFLLIRHGHIVAIFAGIFVLGFFLSIYEGTLPSLLPSLFFTDVRYRALSISFNISVSIFGGTTPLVSSYLVHITDNALAPAFYLTGVSLIGLIVFSLLFVTTSGRALKGAYPTVETKKEAYEVAKQVPEEALWWHEEALEVKKS

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: CP024109_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP024109_2

2119087-2119505

Unclear

I-A

Consensus_repeat	Method
CTTTATATCCCACTACGTTCAGATAAAAC	CRISPRCasFinder
CTTTATATCCCACTACGTTCAGATAAAAC	CRT
CTTTATATCCCACTACGTTCAGATAAAAC	PILER-CR

6 spacers

cas2,cas4,cas3,cas5,cas7,cas8b2,cas6

The CRISPR arrays of CP024109_2

>merge|CP024109|2|2119087-2119505|CRISPRCasFinder,CRT,PILER-CR
CTTTCTATTCCACTACGTTCAGATAAAACTCCACATAGAAGCATTGTGAATCATAATTTTTGCTGTCTTTATATCCCACTACGTTCAGATAAAACGCGAATGGTATGTGCTGAAGACTATCAAAAAATAACCTTTATATCCCACTACGTTCAGATAAAACCGCGTTTTGTAACAGAACGAGACCAACAGGGTCACCTTTATATCCCACTACGTTCAGATAAAACTTTTGGTCGTTACCTGTATGTGTGTTTACCTCCATGACTTTATATCCCACTACGTTCAGATAAAACCTTTTTTGGTCTCGCAGCTTTCCACATCATGAATTTCTTTATATCCCACTACGTTCAGATAAAACCCTTAAAGCTACAGCGAACGTTAAGCGGTCATTGACTTTATATCCCACTACGTTCAGATAAAAC

>CP024109|2|2|2119087-2119505|CRISPRCasFinder
CTTTCTATTCCACTACGTTCAGATAAAAC	TCCACATAGAAGCATTGTGAATCATAATTTTTGCTGT
CTTTATATCCCACTACGTTCAGATAAAAC	GCGAATGGTATGTGCTGAAGACTATCAAAAAATAAC
CTTTATATCCCACTACGTTCAGATAAAAC	CGCGTTTTGTAACAGAACGAGACCAACAGGGTCAC
CTTTATATCCCACTACGTTCAGATAAAAC	TTTTGGTCGTTACCTGTATGTGTGTTTACCTCCATGA
CTTTATATCCCACTACGTTCAGATAAAAC	CTTTTTTGGTCTCGCAGCTTTCCACATCATGAATTT
CTTTATATCCCACTACGTTCAGATAAAAC	CCTTAAAGCTACAGCGAACGTTAAGCGGTCATTGA
CTTTATATCCCACTACGTTCAGATAAAAC

>CP024109|2|1|2119087-2119505|CRT
CTTTCTATTCCACTACGTTCAGATAAAAC	TCCACATAGAAGCATTGTGAATCATAATTTTTGCTGT
CTTTATATCCCACTACGTTCAGATAAAAC	GCGAATGGTATGTGCTGAAGACTATCAAAAAATAAC
CTTTATATCCCACTACGTTCAGATAAAAC	CGCGTTTTGTAACAGAACGAGACCAACAGGGTCAC
CTTTATATCCCACTACGTTCAGATAAAAC	TTTTGGTCGTTACCTGTATGTGTGTTTACCTCCATGA
CTTTATATCCCACTACGTTCAGATAAAAC	CTTTTTTGGTCTCGCAGCTTTCCACATCATGAATTT
CTTTATATCCCACTACGTTCAGATAAAAC	CCTTAAAGCTACAGCGAACGTTAAGCGGTCATTGA
CTTTATATCCCACTACGTTCAGATAAAAC

>CP024109|2|1|2119153-2119505|PILER-CR
CTTTATATCCCACTACGTTCAGATAAAAC	GCGAATGGTATGTGCTGAAGACTATCAAAAAATAAC
CTTTATATCCCACTACGTTCAGATAAAAC	CGCGTTTTGTAACAGAACGAGACCAACAGGGTCAC
CTTTATATCCCACTACGTTCAGATAAAAC	TTTTGGTCGTTACCTGTATGTGTGTTTACCTCCATGA
CTTTATATCCCACTACGTTCAGATAAAAC	CTTTTTTGGTCTCGCAGCTTTCCACATCATGAATTT
CTTTATATCCCACTACGTTCAGATAAAAC	CCTTAAAGCTACAGCGAACGTTAAGCGGTCATTGA
CTTTATATCCCACTACGTTCAGATAAAAC

Protein	Signature genes	Signature genes Name	Protein_function
CP024109.1\|AWC44959.1\|2115480_2115918_+\|DUF2512-domain-containing-protein	unknown	unknown	gnl\|CDD\|371204
CP024109.1\|AWC44958.1\|2111790_2115321_-\|DUF4020-domain-containing-protein	unknown	unknown	gnl\|CDD\|238697
CP024109.1\|AWC44960.1\|2115964_2117359_-\|D-serine-ammonia-lyase	unknown	unknown	gnl\|CDD\|235096
CP024109.1\|AWC44957.1\|2109946_2111023_-\|bifunctional-3-deoxy-7-phosphoheptulonate-synthase/chorismate-mutase	unknown	unknown	gnl\|CDD\|183614
CP024109.1\|AWC44955.1\|2105467_2107441_-\|LTA-synthase-family-protein	unknown	unknown	gnl\|CDD\|224287
CP024109.1\|AWC44953.1\|2102444_2102714_-\|PTS-lactose-transporter-subunit-IIB	unknown	unknown	gnl\|CDD\|99905
CP024109.1\|AWC44956.1\|2107914_2109540_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|237894
CP024109.1\|AWC44962.1\|2119728_2119992_-\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
CP024109.1\|AWC44969.1\|2129627_2129954_-\|antibiotic-biosynthesis-monooxygenase	unknown	unknown	gnl\|CDD\|225209
CP024109.1\|AWC44971.1\|2131072_2131639_-\|N-acetyltransferase	unknown	unknown	gnl\|CDD\|224584
CP024109.1\|AWC44967.1\|2125392_2127141_-\|type-I-B-CRISPR-associated-protein-Cas8b1/Cst1	cas8b2	cd09665_cas8b2_CAS-I-B	gnl\|CDD\|187796
CP024109.1\|AWC44964.1\|2121532_2123758_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|273707
CP024109.1\|AWC44970.1\|2130295_2130640_+\|hypothetical-protein	unknown	unknown	unknown
CP024109.1\|AWC44954.1\|2102726_2104832_-\|PTS-lichenan-transporter-subunit-IIC	unknown	unknown	gnl\|CDD\|226234
CP024109.1\|AWC44968.1\|2127140_2127842_-\|CRISPR-associated-endoribonuclease-Cas6	cas6	pfam01881_cas6_CAS-I:CAS-III	gnl\|CDD\|187783
CP024109.1\|AWC44961.1\|2117600_2117984_-\|VOC-family-protein	unknown	unknown	gnl\|CDD\|319924
CP024109.1\|AWC44966.1\|2124506_2125400_-\|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	cas7	cd09687_cas7_CAS-I-B	gnl\|CDD\|187818
CP024109.1\|AWC44965.1\|2123811_2124510_-\|type-I-B-CRISPR-associated-protein-Cas5	cas5	cd09658_cas5_CAS-I-B	gnl\|CDD\|187789
CP024109.1\|AWC44952.1\|2101105_2102365_-\|PTS-ascorbate-transporter-subunit-IIC	unknown	unknown	gnl\|CDD\|236502
CP024109.1\|AWC44963.1\|2120972_2121470_-\|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl\|CDD\|366863

Protein	Function_ID	Function_description	E-value
CP024109.1\|AWC44959.1\|2115480_2115918_+\|DUF2512-domain-containing-protein	gnl\|CDD\|371204	pfam10710, DUF2512, Protein of unknown function (DUF2512). Proteins in this family are predicted to be integral membrane proteins, and many of them are annotated as being YndM protein. They are all found in Firmicutes. The true function is not known.	2.79979e-37
CP024109.1\|AWC44958.1\|2111790_2115321_-\|DUF4020-domain-containing-protein	gnl\|CDD\|238697	cd01406, SIR2-like, Sir2-like: Prokaryotic group of uncharacterized Sir2-like proteins which lack certain key catalytic residues and conserved zinc binding cysteines; and are members of the SIR2 superfamily of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation.	5.91122e-54
CP024109.1\|AWC44960.1\|2115964_2117359_-\|D-serine-ammonia-lyase	gnl\|CDD\|235096	PRK02991, PRK02991, D-serine dehydratase; Provisional.	0
CP024109.1\|AWC44957.1\|2109946_2111023_-\|bifunctional-3-deoxy-7-phosphoheptulonate-synthase/chorismate-mutase	gnl\|CDD\|183614	PRK12595, PRK12595, bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed.	0
CP024109.1\|AWC44955.1\|2105467_2107441_-\|LTA-synthase-family-protein	gnl\|CDD\|224287	COG1368, MdoB, Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily [Cell envelope biogenesis, outer membrane].	0
CP024109.1\|AWC44953.1\|2102444_2102714_-\|PTS-lactose-transporter-subunit-IIB	gnl\|CDD\|99905	cd05563, PTS_IIB_ascorbate, PTS_IIB_ascorbate: subunit IIB of enzyme II (EII) of the L-ascorbate-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS). In this system, EII is an L-ascorbate-specific permease with two cytoplasmic subunits (IIA and IIB) and a transmembrane channel IIC subunit. Subunits IIA, IIB, and IIC are encoded by the sgaA, sgaB, and sgaT genes of the E. coli sgaTBA operon. In some bacteria, the IIB (SgaB) domain is fused C-terminal to the IIA (SgaT) domain. The IIB domain fold includes a central four-stranded parallel open twisted beta-sheet flanked by alpha-helices on both sides. The seven major PTS systems with this IIB fold include ascorbate, chitobiose/lichenan, lactose, galactitol, mannitol, fructose, and a sensory system with similarity to the bacterial bgl system.	9.56231e-35
CP024109.1\|AWC44956.1\|2107914_2109540_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|237894	PRK15064, PRK15064, ABC transporter ATP-binding protein; Provisional.	0
CP024109.1\|AWC44962.1\|2119728_2119992_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	2.02502e-27
CP024109.1\|AWC44969.1\|2129627_2129954_-\|antibiotic-biosynthesis-monooxygenase	gnl\|CDD\|225209	COG2329, COG2329, Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides [General function prediction only].	5.76195e-19
CP024109.1\|AWC44971.1\|2131072_2131639_-\|N-acetyltransferase	gnl\|CDD\|224584	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis].	1.23367e-45
CP024109.1\|AWC44967.1\|2125392_2127141_-\|type-I-B-CRISPR-associated-protein-Cas8b1/Cst1	gnl\|CDD\|187796	cd09665, Cas8a1_I-A, CRISPR/Cas system-associated protein Cas8a1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins, some contain Zn-finger domain; signature gene for I-A subtype; also known as CXXC_CXXC family.	1.471e-10
CP024109.1\|AWC44964.1\|2121532_2123758_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|273707	TIGR01587, CRISPR-associated_endonuclease/helicase_Cas3, CRISPR-associated helicase Cas3. This model represents the highly conserved core region of an alignment of Cas3, a protein found in association with CRISPR repeat elements in a broad range of bacteria and archaea. Cas3 appears to be a helicase, with regions found by pfam00270 (DEAD/DEAH box helicase) and pfam00271 (Helicase conserved C-terminal domain). Some but not all members have an N-terminal HD domain region (pfam01966) that is not included within this model.	8.88979e-63
CP024109.1\|AWC44954.1\|2102726_2104832_-\|PTS-lichenan-transporter-subunit-IIC	gnl\|CDD\|226234	COG3711, BglG, Transcriptional antiterminator [Transcription].	1.41328e-55
CP024109.1\|AWC44968.1\|2127140_2127842_-\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|187783	cd09652, Cas6-I-III, CRISPR/Cas system-associated RAMP superfamily protein Cas6. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6 is an endoribonuclease that generates crRNAs, predicted subunit of Cascade complex; RAMP superfamily protein; Possesses double RRM/ferredoxin fold.	1.0641e-22
CP024109.1\|AWC44961.1\|2117600_2117984_-\|VOC-family-protein	gnl\|CDD\|319924	cd07263, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC domain is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.	1.51641e-44
CP024109.1\|AWC44966.1\|2124506_2125400_-\|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	gnl\|CDD\|187818	cd09687, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas7 is a RAMP superfamily protein; Subunit of the Cascade complex; also known as Cst2/DevR family.	4.74396e-53
CP024109.1\|AWC44965.1\|2123811_2124510_-\|type-I-B-CRISPR-associated-protein-Cas5	gnl\|CDD\|187789	cd09658, Cas5_I-B, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	2.84624e-29
CP024109.1\|AWC44952.1\|2101105_2102365_-\|PTS-ascorbate-transporter-subunit-IIC	gnl\|CDD\|236502	PRK09410, ulaA, PTS system ascorbate-specific transporter subunit IIC; Reviewed.	0
CP024109.1\|AWC44963.1\|2120972_2121470_-\|CRISPR-associated-protein-Cas4	gnl\|CDD\|366863	pfam01930, Cas_Cas4, Domain of unknown function DUF83. This domain has no known function. The domain contains three conserved cysteines at its C-terminus.	3.71199e-58

>CP024109.1|AWC44961.1|2117600_2117984_-|VOC-family-protein
MMIHKVGQIMLYVKDQDEAVQFWTEKMGFHLIAEEDNGKGFRWIEIAPTKEAETSIVLHNKEFIAKMQPELNLNTPSMLFFTENIEQLHKQLVDKKVEVGEIVNMPTGKAFNFADDEGNYFAIMEKS
>CP024109.1|AWC44960.1|2115964_2117359_-|D-serine-ammonia-lyase
MQIPMLMNRKIEAFGGGNDMWEKMIKGKTIRKWTEENPILRQLIETSEVFWENPNYSSYEKARQDFVLTTEDVKEAEARLLRFAPYIAKVFPETKEMDGIIESPLVETMHMKQYLEDAFAQEMPGRFLLKCDNNLPISGSIKARGGIYEVLQHAEKLAIEHNLLCEEDHYAKLDSDRFREFFSQYSIAVGSTGNLGLSIGIMSAKLGFQVTVHMSADAKEWKKELLRNKGVTVVEYESDYSKAVEEGRKQAEQDPHCYFIDDENSKHLFLGYAVAASRVKQQLEDKNIRVDKDHPLFVYLPCGVGGGPGGVAFGLKLLFGDAVHCFFAEPTHSPCMLLGLVTGLHDEIAVQDFEIDNVTEADGLAVGRASGFVGKIMEPLLSGCYTVEDQQLYELLKAMVDTENIRLEPSALAAVYGPVQLYRQENYVKRHKLEGKMNRSTHMMWATGGGMVPKSVFDEYYQNQ
>CP024109.1|AWC44959.1|2115480_2115918_+|DUF2512-domain-containing-protein
MSDIALVLIKFISCIIAFAIGLALFFPATLVQIISFSLFVTIISYVFVDKIILERIGRSAAIMTDFLLTYLSVWIFGNILLDHYMQIAWGSILSALVFTLCEVIVQRFSHAHERHNSDNIHLNRRFSYGTEFAEEQNPLDKNKKK
>CP024109.1|AWC44958.1|2111790_2115321_-|DUF4020-domain-containing-protein
MTFLGKEGIRMWITSEVEIPEELFDHLEQGKLVLFVGAGVSMKGKSNLPNFDDLVDEIAKALYVEKREITEPHDYYLGKIAKTKDVHQIAKDLVNVEGSKPNPLHYAIPRLFPKDTDVRIVTTNFDQHFTTAMRESDRDFNIYYAPALPTGRAFKGLAYIHGNVEQEKENLILTDGDFGRAYLTEGWARRFLVDLFSNYTVLFIGYSHNDPVMKYLATGLPPSTRRYAFVAHGDNTYHWEHLGVKPIVYPNKANNHQALVRAVKRWAELMGDNYITKRMRIRDIVTVPPSVEQEQLSYIKQAIKKIEMLRYFVEFARDYGWVEWLEAEGKLQNLFRMTSHYDEVDELLAAWLVEQFLVSHQKELFQLIFKNHSKISPLLWKSICTYLKETKKPMDPILFAKWTLLLLETAENNSQSIEKISYLLQKCSFPEHKEISVLLLTFILDGKIKLKRVKRWEDDMQDSVELEESSCLPVSVFSHVQRIWEEKMKPHISYFAGPILVMGLEKLQMLSLRQTALQKRDGVLYHTMEFSEHDLQPKDFTFLIRIMKECLAYLCEHNKEKAAYYIAQMIDTDSILQKKIAIEAMSENTFVTADEKLMWLRKQQLIFDFTYKHEVFQFLKKHYQNALEKTKKEVIQEVMKHLENERFFDACLVLDLLYTCDANSTSTARAYRIMKRTHPHFTSNQYGEKKEEVRAPNIICDVTADGLLKLKGHEIKKQILLCSNDDSFEQRHFLEMLSKACKLNVDWSIALAYQLIGEQRVSDEIWFVCIREWRNNRKLTNEQIQKIIPLLQQFVRNPAFYWLISSFLYEISNRLEDFQENQIRAVKRFAFSLFPHIMKGESSFKVGELDFYNESIQHPVGKMTSVLLKLLAYDHLYDRNIHEYLFLFEEQIKVASERTHFMLARLTADVTFLFHIEKQWCRKYVLPYLKLNREHKAVKYAWAGLCYTQINLPLFTEIKKYIKYAAEHLELLHPHTKQVFLKWLSFVCIKCVLYWGQRTDWVYMIFIEEKEHDKIKFLKHLCYYVKTLSAREKQKFWDSWLATFLKERPKMSLITGREYVMLLRFVFYMDEVAEKGVYTILNCFPIPIEHCSEAEMKQLLLTILTRKEKVIAHVQAYAKLFFILLQIVQDASSIENEMIQMKEMLETCHVDDDILTAIQNEMIRIGIVVTNFQQES
>CP024109.1|AWC44957.1|2109946_2111023_-|bifunctional-3-deoxy-7-phosphoheptulonate-synthase/chorismate-mutase
MANHELEQLRKQVDEINLQLLKLLNERGRIVQKIGEQKQLQGTKRFDPVREREVLDMIAERNEGPFETSTVQHIFKTIFKASLELQEDDNRKALLVSRKKKQENTIVDVKGERLGSGTQSFIMGPCAVESLEQVRQVAQAIKEQGLKLMRGGAFKPRTSPYDFQGLGVEGLQILRQVADEFDLAIISEILNPNDVEMALDYVDVIQVGARNMQNFDLLRAVGKVNKPVLLKRGLAATIDEFMHAAEYIIAQGNDQIILCERGIRTYEKATRNTLDISAVPILKKETHLPVVVDVTHSTGRRDLLLPTAKAALAIGADAVMAEVHPDPAVALSDSAQQMDIPEFHRFMEELKEFKNKLS
>CP024109.1|AWC44956.1|2107914_2109540_-|ABC-transporter-ATP-binding-protein
MITVSNVSLRFADRKLFEDVNIKFTPGNCYGLIGANGAGKSTFLKILSGEIEPTTGDVHITPGERLAVLKQNHFEYEEFPVLETVIMGHTRLYEVMQEKNAIYMKEDFSDEDGMRAAELEGEFAELNGWEAESEAAILLKGLGIGEELHDKKMSELTGAEKVKVLLAQALFGQPDVLLLDEPTNHLDLKAIQWLENFLMNFENTVIVVSHDRHFLNKVCTHMADLDFGKIQLYVGNYDFWYESSQLALKLTQDANKKKEEKIKELQNFIARFSSNASKAKQATSRKKLLDKITLDDIKPSSRRYPFVGFTPEREVGNDLLTVEGLSKTIDGEKVLDNVYFTLNKGDKVAFIGRNDIAMTTLFKILMGEMEPDSGSFKWGVTTSQSYFPRDNSAYFENSEYNLVEWLRQFSPQDESESFLRGFLGRMLFSGEEVKKNVSVLSGGEKVRCMLSKMMLSGANVLVLDDPTNHLDLESITALNNGLIAFKGTILFTSHDHQFVQTIANRIIEVTPNGVIDKETTYDEYLENEELQKQVSAMYQNK
>CP024109.1|AWC44955.1|2105467_2107441_-|LTA-synthase-family-protein
MKQLLQKSKRVLSNHFGFFIFAVVLFWLKTYAAYVTEFNLGISNTIQKFLLFFNPLSSAILFLGLALFAKGKRSYILLIVINLLLSILLYANVVYYRFFSDFITFPTLTQTNNFGEIGGSVLALLQPYDPLYFLDTIVLLVLVLTKVANPKPIRVAKYKLSLVFISAILIFSINLGLAESDRPQLLTRTFDRNYIVKYLGAYNYTIYDGIQSMKASTERAMADGDSMTEVRNYIASNYASPSAEYFGKGKGMNVIYIHLESFQNFLIDYKLNGQEVTPFINSFTKDANTLYFDNFFHQTGQGKTSDAEFMLENSMFGLPQGSVFTTKSHNTYQAAPAILGQQGYTSAVFHGNYKTFWNRDDIYKSFGFNKFFDASYYDMNEKDVVNYGLKDKPFFNESIPLLETVKQPFYTKFITLSNHFPYPIDKEEATIEPATTGDSSVDTYFQTARYLDEAVKGFVDYLKQSGLYDNSIIVMYGDHYGISDNHNRAMSQIMGKEIHSFENAQLQRVPLIVRVPGIKGGVQHQYGGEIDVLPTLLHLLGIDTKDYIQFGTDLLSPEHKQVVAFRNGNYVSPTVTALNGRYYDTTTGEPVEVTEEIKQNEQMVQQTLKLSDQVVNGDLLRFYTPEGFTPVDRSKYNYNHRDKNKTKVKTTQDTKTE
>CP024109.1|AWC44954.1|2102726_2104832_-|PTS-lichenan-transporter-subunit-IIC
MILDYRSAAILQQMMQADSYTSVDQLTEVLQVSKRTIYYDMKKVDDWLITEHLEPIQYVRPLGYCLDKKTKQKVAQKLQGLITVQYEYSPQERKAWLALYLLTEEKRILLEDLIKLIQVSRNTTLADLKKLKAELGKFKLSLQFHRKQGYYIKGMEQGKRNVLIAYLSQLIAKHGWEYVVSHMRNIVNHGEGEKKQTAQDKLHVIKGILSKCEEFLGVQYTDEVLENLSVYMYLFCSRIVKGRYIEMEETEKAVLRETKHFQAATYIGTQFEKLLYIKFPKDEIYYITTHLLGAKVNAQQKEYEKNDVHGIWHIVDCMIQDFQHYACVIFRDFTGLASDLYLHMKPAFYRVKYGIEIKNPLLQIIRNSYAEVYHLTKKVVHHFEQYVGKEISEDEIAFITMHFSAWMRKEGIVPSPRKTALLVCPNGIGTSRMLQYQLEQLFSNMDILQAISKREYESNTFDVDCIITTTELEKGLIPIFMVNPILTDAEKASLFRKVNATLFREDQNDSADIIMQMIHKYADVRDEHALKRELREFISGPVHFGREEKYKPMLNELLTKEYIQLQDHVDSWEGAIRIAAKPLLQTEYISEEYVQEMIANVKKLGPYIVIAPKIAIPHARPESGVKKLGMSLLQLKESVSFSEKQEHAVNLIIVLAAIDNETHLKALAQLSDMLSQPENVDLLIRSNSKEQMLEMIAKYSN
>CP024109.1|AWC44953.1|2102444_2102714_-|PTS-lactose-transporter-subunit-IIB
MKKILVVCGNGLGSSFIVEMNVKKILDELGLQAEVSHTDLASSKSEQADLYLGSKDIICNLEDGVRTVAGLTNILDQNEIKEALQKHLM
>CP024109.1|AWC44952.1|2101105_2102365_-|PTS-ascorbate-transporter-subunit-IIC
MFDLIMKDILGQPAILVGLFAMCGLLLQKKNFADTVSGTLKTIMGFIVLGGGATILTGSLDIFGKMFDKAFHIKGIIPNNEAIVAIAQQTLGKETAFIMVFGMIVNLLIARFTKLKYVFLTGHHTLFMACLISAVFSTAGLKGFSLVLIGSILLGVLMVIFPALLQPYVRKITGMDDIAIGHFGSVGYLAAGFVGSKFGNKEKSTELIQVPKSLGFLRDTSVSMSLTMAVLFFIVAPFAGKQFIEAELSNGQNFLVYSFMQAITFAAGVYIILAGVRMLIAEIVPAFKGIADKLVPNAKPALDCPTIFPFAPNAVIIGFLTSFIAGLLSMFILPVIGLSVIVPGLIPHFFTGATAAVFGNATGGRRGAILGSFVNGLLISFLPALLLPVLGGLGFENTTFGDSDFAVIGILISEITKLF
>CP024109.1|AWC44962.1|2119728_2119992_-|CRISPR-associated-endonuclease-Cas2
MFVIITYDIGEKRVGKACKKLKQYLTWTQNSVFEGELSRTQLLKCLAELDQIIISSEDSIYLYEVNNPRNIKKKVFGIEKSYEELFL
>CP024109.1|AWC44963.1|2120972_2121470_-|CRISPR-associated-protein-Cas4
MKGTYIHYYFVCHRKLWLFVHQIQLEKESERVIEGKILHDSTYQRMEHRELDIDGVGKIDEIEGEYIREIKLTSKMQEADRWQLLYYLAELKKRGVTKKGLLSYKKEKRTEEVHLTEANQQELENIQKRIQAIILSDKPPKLEKKKYCSSCAYYDFCFSGEGEGC
>CP024109.1|AWC44964.1|2121532_2123758_-|CRISPR-associated-helicase/endonuclease-Cas3
MFLAKSNPKETLREHTDELRSRYKKLKESYGHYFDERIWELLLYAVDYHDAGKAHEPFQLNIRRALGEGVKLQRNLEVPHNYLSPFLLPESIFSLPKKDYQALIQAIAYHHERDIEPNDTLIRQALWQDLWPKMDEINKHLNINGANLEKKFNRILAQLHRRIKYSDNKENYVDYVILKGLLHRIDHAASAHVDIEIDAKQDFKKLVDAGFQKIAEKKRVPVEEVYRDLQKHAHKHRKENLIIVAQTGMGKTEAALLWASDSKTFFTLPLRVSINALFHRVYEKMNYKNVGLLHSSSMDYLTENLEEDWEVIAEQSKHFSSKLLFTTIDQILKFPFLYRGYEKELATMAYSSVVIDEIQAYDPKIAAVLVRALEMIYLVGGKFLLMTATLPSIYLETLNESDIISSDGFRVDTFIDDCVIRHCIEVVEKPIVDDFEKIVDLGKQKKILVIANTVKRAMELYNKIKEYSDNVHVFHSMYIQKHRTLIEKELLLFDENKEATGIWITTQLVEASIDIDFDVLFTEAATLDSLCQRFGRCYRRRQYMMHQEPNVFIYAVDMSGVKYVYDEEILMKSLDILRPFNRKILLESQKIELVSQLYSRENLKGTEFLKTFDDALEQLQTFEDYTLSSKDAQKLLRDIQAELVIPRNIYDENEHLFEQLKIVNKEERARLYREIAKLTVSLRKNRVRGKTSRIPHERIQSNGKKYNLLPWIKILELQYDFDEKSKTGTGVLLDQELDNFI
>CP024109.1|AWC44965.1|2123811_2124510_-|type-I-B-CRISPR-associated-protein-Cas5
MKVIRLKLFQETACYTKPFANKVAETYPLPPYSTVKGMIHQLLQANELLPLRFSIQGNYETKLIDYRKSYMVKKKSVSMPIIFDGLAMEVPEQEHMTSMPLYTHMLFNVELVIHIAGEEALLERIYQHFIELNQHLSLGRHEDLVRVDEVTFVELEECDEWYSKYAIYVPKYYYKTDFPAGIPYRLNWTYKIVNGIREWNKIPSLYVNGNNPHFEDGKLFHTDGEHIVLWNE
>CP024109.1|AWC44966.1|2124506_2125400_-|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR
MNNKALTLTIIFKASSLNYGEGTANISELKKFHRGNGEVYSFASRQAIRYDIVRLGNQLFNWNLNVVDKSKGVVQFKDDCTIADSVEMDLFGYMKTKAKAGADKRSAVVRLSHAVSLEPYRSDLEFLNNMGLASRIQENPNLATLEQHESLYTYTLTVDLSKVGVDGEIELPVDEKVNRVKQLIELTKYLNREIRGRQENLSPLFVIGGVYPIANPFFLGRISLQNFDSNLLNVKSLASVLGQTVLGHDVRTCTKIGLVDGVFANEEEISQLTDTVSVEEFYQHVMNEVEQFYKVLV
>CP024109.1|AWC44967.1|2125392_2127141_-|type-I-B-CRISPR-associated-protein-Cas8b1/Cst1
MIFVTEEIPLAAEEWTITQGLVGYYRILKHAGIKVKTTDEGILFNPEHLRNFEHYYFDYFLDRFSVAKRDEQNIRRTFLKFRAESESKGSKEAKRRMQAAKKSLDETIKKTAIEKVEKKFEDSSHKKRLVEYATLIRNQKTYNPEMDKWIEEYIQALSEPNINEKLTLNYFKATVLGTYFGQVSFLNVSHTSKDIEEQKEIFRKDYIESLLADLELQQMIARAEDSDEIMKYLEISTHEMAKKLKTKFKKMTIQQIKDYVSNEINCCSFFDSQWAFEQYSELHFSPLSMSASKALNFYWNANGTLTIPVSKLAKLILFCAPAGASIIGGKSLFVQREGRFEQVIYANETYEIGRSKDKAFDEIIFDLIAEQKTKAQHTGDSYLILEYSSEYNAKKTDLQYLHLTPGLCSFFKEKNCTKWFSRLNYVLRNQIVHAFLRYQDSKHIIHNALRKKLQEQKLANEIVYACLLRCYYLFFVKGEGKMNTDLKTSKNRIWSAFYEGVAIKNIVEEGKIRSVAYRLLNAIRSNDKKMFLDTVMRLYMSVEKPFPRVFMNILDESNIDFASIGDSFIAGLISKEEEKINE
>CP024109.1|AWC44968.1|2127140_2127842_-|CRISPR-associated-endoribonuclease-Cas6
MRLHIKLQTNRFPISYRMMMVSFIKEALKLSDAAYFQQIYQESKANRPFSYGVYIHDYKLNATEFHIKGYVGLTITSPDAQFMLHFYNGLMKMNDFRYKGFSLKRMKVQMVNSADINQNHVYFKTLSPLLIRDKHAKPIFIDDDKFEKELNYISDTVLKEFRGYGLKQPLIFTSKNMKKVVVKEKIHSDHDTLFFTGYHGIFSLQGAVEDLKILSEIGLGFRSSQGFGAVEVV
>CP024109.1|AWC44969.1|2129627_2129954_-|antibiotic-biosynthesis-monooxygenase
MFIETKTLTVKEGTSDLVVQRFSGEGMIEKFEGFIDLNVLVKKVRRGDEEVVIMIRWESEEAWKNWETSEEHLAGHRANRGKPKPEHILNAEHAVYYVKATKSAYQQS
>CP024109.1|AWC44970.1|2130295_2130640_+|hypothetical-protein
MRKAILIFIVAIFIIGIVHIAVTPINYKSYTIEALWFASAGCTLIFLAFLNYVLISIKQRQTRFFVICHTANILCTILVAFILTIAFAPHIILLFVLLVSKTLLVIGFQFSSKS
>CP024109.1|AWC44971.1|2131072_2131639_-|N-acetyltransferase
MGFPTLETERFILRELTLLDAENMFHYFQKESVMRYFGMDAIRNMEQVKRMIQMFSKKYKEGSQVRWGIELKGTNRFIGTCGFHFINLNHKRAEIGYELDDAYWGKGYATEAVQTIVTYAFQTMKLIRIGAVVYKENEASHKLLKKIGFQKEGLLRKYMIQNNVEYDTIIYSLLAEDWEKRSCLSIKY

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: CP024109_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP024109_3

2128788-2129341

Unclear

I-A

Consensus_repeat	Method
CTTTATATCCCACTACGTTCAGATAAAAC	CRISPRCasFinder
CTTTATATCCCACTACGTTCAGATAAAAC	CRT
CTTTATATCCCACTACGTTCAGATAAAAC	PILER-CR

8 spacers

cas6,cas8b2,cas7,cas5,cas3,cas4,cas2

The CRISPR arrays of CP024109_3

>merge|CP024109|3|2128788-2129341|CRISPRCasFinder,CRT,PILER-CR
TTATCTTATCCACTACGTTCAGATAAAACTTTCTAACAATGTCCAAAAACCATTGAATACATTGGATTTATATCCCACTACGTTCAGATAAAACTGGGACAAACATGCTACTTTCTTGAACGCTCAGTCAACTTTATATCCCACTACGTTCAGATAAAACAGGATTTCACGGAGCGATTGCAAAGAAAAACATCCCCTTTATATCCCACTACGTTCAGATAAAACCCGTGTTGGTGGCGTTGGTGGTGCATTGCAAACCGTCTTTATATCCCACTACGTTCAGATAAAACCACTGAAATTAGTGTCGTCTAAAACAGAGACGTTTCCCTTTATATCCCACTACGTTCAGATAAAACTGAACCATTTTTCAATAATCAATATTCCTTTCTTAAGCTTTATATCCCACTACGTTCAGATAAAACTCGTGCGACCAAGCGGAAATGGTAGCGCACGGATCACTTTATATCCCACTACGTTCAGATAAAACACGCGCGTAGTGTAGAAGACTTTGCACGCGGTATCGTGCTTTATATCCCACTACGTTCAGATAAAAC

>CP024109|3|3|2128788-2129341|CRISPRCasFinder
TTATCTTATCCACTACGTTCAGATAAAAC	TTTCTAACAATGTCCAAAAACCATTGAATACATTGG
ATTTATATCCCACTACGTTCAGATAAAAC	TGGGACAAACATGCTACTTTCTTGAACGCTCAGTCAA
CTTTATATCCCACTACGTTCAGATAAAAC	AGGATTTCACGGAGCGATTGCAAAGAAAAACATCCC
CTTTATATCCCACTACGTTCAGATAAAAC	CCGTGTTGGTGGCGTTGGTGGTGCATTGCAAACCGT
CTTTATATCCCACTACGTTCAGATAAAAC	CACTGAAATTAGTGTCGTCTAAAACAGAGACGTTTCC
CTTTATATCCCACTACGTTCAGATAAAAC	TGAACCATTTTTCAATAATCAATATTCCTTTCTTAAG
CTTTATATCCCACTACGTTCAGATAAAAC	TCGTGCGACCAAGCGGAAATGGTAGCGCACGGATCA
CTTTATATCCCACTACGTTCAGATAAAAC	ACGCGCGTAGTGTAGAAGACTTTGCACGCGGTATCGTG
CTTTATATCCCACTACGTTCAGATAAAAC

>CP024109|3|2|2128788-2129341|CRT
TTATCTTATCCACTACGTTCAGATAAAAC	TTTCTAACAATGTCCAAAAACCATTGAATACATTGG
ATTTATATCCCACTACGTTCAGATAAAAC	TGGGACAAACATGCTACTTTCTTGAACGCTCAGTCAA
CTTTATATCCCACTACGTTCAGATAAAAC	AGGATTTCACGGAGCGATTGCAAAGAAAAACATCCC
CTTTATATCCCACTACGTTCAGATAAAAC	CCGTGTTGGTGGCGTTGGTGGTGCATTGCAAACCGT
CTTTATATCCCACTACGTTCAGATAAAAC	CACTGAAATTAGTGTCGTCTAAAACAGAGACGTTTCC
CTTTATATCCCACTACGTTCAGATAAAAC	TGAACCATTTTTCAATAATCAATATTCCTTTCTTAAG
CTTTATATCCCACTACGTTCAGATAAAAC	TCGTGCGACCAAGCGGAAATGGTAGCGCACGGATCA
CTTTATATCCCACTACGTTCAGATAAAAC	ACGCGCGTAGTGTAGAAGACTTTGCACGCGGTATCGTG
CTTTATATCCCACTACGTTCAGATAAAAC

>CP024109|3|2|2128854-2129341|PILER-CR
TTTATATCCCACTACGTTCAGATAAAACT	GGGACAAACATGCTACTTTCTTGAACGCTCAGTCAAC
TTTATATCCCACTACGTTCAGATAAAACA	GGATTTCACGGAGCGATTGCAAAGAAAAACATCCCC
TTTATATCCCACTACGTTCAGATAAAACC	CGTGTTGGTGGCGTTGGTGGTGCATTGCAAACCGTC
TTTATATCCCACTACGTTCAGATAAAACC	ACTGAAATTAGTGTCGTCTAAAACAGAGACGTTTCCC
TTTATATCCCACTACGTTCAGATAAAACT	GAACCATTTTTCAATAATCAATATTCCTTTCTTAAGC
TTTATATCCCACTACGTTCAGATAAAACT	CGTGCGACCAAGCGGAAATGGTAGCGCACGGATCAC
TTTATATCCCACTACGTTCAGATAAAACA	CGCGCGTAGTGTAGAAGACTTTGCACGCGGTATCGTGC
TTTATATCCCACTACGTTCAGATAAAAC

Protein	Signature genes	Signature genes Name	Protein_function
CP024109.1\|AWC44959.1\|2115480_2115918_+\|DUF2512-domain-containing-protein	unknown	unknown	gnl\|CDD\|371204
CP024109.1\|AWC44963.1\|2120972_2121470_-\|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl\|CDD\|366863
CP024109.1\|AWC44968.1\|2127140_2127842_-\|CRISPR-associated-endoribonuclease-Cas6	cas6	pfam01881_cas6_CAS-I:CAS-III	gnl\|CDD\|187783
CP024109.1\|AWC44966.1\|2124506_2125400_-\|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	cas7	cd09687_cas7_CAS-I-B	gnl\|CDD\|187818
CP024109.1\|AWC44977.1\|2135844_2136090_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|365903
CP024109.1\|AWC44973.1\|2132491_2133028_-\|DUF2812-domain-containing-protein	unknown	unknown	gnl\|CDD\|378589
CP024109.1\|AWC44960.1\|2115964_2117359_-\|D-serine-ammonia-lyase	unknown	unknown	gnl\|CDD\|235096
CP024109.1\|AWC44975.1\|2133954_2134938_-\|DUF4003-domain-containing-protein	unknown	unknown	gnl\|CDD\|379047
CP024109.1\|AWC44976.1\|2135018_2135486_-\|NUDIX-domain-containing-protein	unknown	unknown	gnl\|CDD\|240044
CP024109.1\|AWC44971.1\|2131072_2131639_-\|N-acetyltransferase	unknown	unknown	gnl\|CDD\|224584
CP024109.1\|AWC44967.1\|2125392_2127141_-\|type-I-B-CRISPR-associated-protein-Cas8b1/Cst1	cas8b2	cd09665_cas8b2_CAS-I-B	gnl\|CDD\|187796
CP024109.1\|AWC44964.1\|2121532_2123758_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|273707
CP024109.1\|AWC44962.1\|2119728_2119992_-\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
CP024109.1\|AWC44970.1\|2130295_2130640_+\|hypothetical-protein	unknown	unknown	unknown
CP024109.1\|AWC44974.1\|2133029_2133353_-\|PadR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|163261
CP024109.1\|AWC44961.1\|2117600_2117984_-\|VOC-family-protein	unknown	unknown	gnl\|CDD\|319924
CP024109.1\|AWC44969.1\|2129627_2129954_-\|antibiotic-biosynthesis-monooxygenase	unknown	unknown	gnl\|CDD\|225209
CP024109.1\|AWC44978.1\|2136219_2137260_-\|NAD-dependent-dehydratase	unknown	unknown	gnl\|CDD\|187575
CP024109.1\|AWC44965.1\|2123811_2124510_-\|type-I-B-CRISPR-associated-protein-Cas5	cas5	cd09658_cas5_CAS-I-B	gnl\|CDD\|187789
CP024109.1\|AWC44972.1\|2132008_2132254_+\|DNA-alkylation-repair-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP024109.1\|AWC44959.1\|2115480_2115918_+\|DUF2512-domain-containing-protein	gnl\|CDD\|371204	pfam10710, DUF2512, Protein of unknown function (DUF2512). Proteins in this family are predicted to be integral membrane proteins, and many of them are annotated as being YndM protein. They are all found in Firmicutes. The true function is not known.	2.79979e-37
CP024109.1\|AWC44963.1\|2120972_2121470_-\|CRISPR-associated-protein-Cas4	gnl\|CDD\|366863	pfam01930, Cas_Cas4, Domain of unknown function DUF83. This domain has no known function. The domain contains three conserved cysteines at its C-terminus.	3.71199e-58
CP024109.1\|AWC44968.1\|2127140_2127842_-\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|187783	cd09652, Cas6-I-III, CRISPR/Cas system-associated RAMP superfamily protein Cas6. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6 is an endoribonuclease that generates crRNAs, predicted subunit of Cascade complex; RAMP superfamily protein; Possesses double RRM/ferredoxin fold.	1.0641e-22
CP024109.1\|AWC44966.1\|2124506_2125400_-\|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	gnl\|CDD\|187818	cd09687, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas7 is a RAMP superfamily protein; Subunit of the Cascade complex; also known as Cst2/DevR family.	4.74396e-53
CP024109.1\|AWC44977.1\|2135844_2136090_-\|hypothetical-protein	gnl\|CDD\|365903	pfam00144, Beta-lactamase, Beta-lactamase. This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	0.00258085
CP024109.1\|AWC44973.1\|2132491_2133028_-\|DUF2812-domain-containing-protein	gnl\|CDD\|378589	pfam11193, DUF2812, Protein of unknown function (DUF2812). This is a bacterial family of uncharacterized proteins, however some members of this family are annotated as membrane proteins.	5.25447e-33
CP024109.1\|AWC44960.1\|2115964_2117359_-\|D-serine-ammonia-lyase	gnl\|CDD\|235096	PRK02991, PRK02991, D-serine dehydratase; Provisional.	0
CP024109.1\|AWC44975.1\|2133954_2134938_-\|DUF4003-domain-containing-protein	gnl\|CDD\|379047	pfam13170, DUF4003, Protein of unknown function (DUF4003). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 327 and 345 amino acids in length.	1.01847e-102
CP024109.1\|AWC44976.1\|2135018_2135486_-\|NUDIX-domain-containing-protein	gnl\|CDD\|240044	cd04688, Nudix_Hydrolase_29, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+, for their activity and contain a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which functions as a metal binding and catalytic site. Substrates of nudix hydrolases include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the nudix hydrolase is to sanitize the nucleotide pools and to maintain cell viability, thereby serving as surveillance & "house-cleaning" enzymes. Substrate specificity is used to define families within the superfamily. Differences in substrate specificity are determined by the N-terminal extension or by residues in variable loop regions. Mechanistically, substrate hydrolysis occurs by a nucleophilic substitution reaction, with variation in the numbers and roles of divalent cations required.	9.11694e-49
CP024109.1\|AWC44971.1\|2131072_2131639_-\|N-acetyltransferase	gnl\|CDD\|224584	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis].	1.23367e-45
CP024109.1\|AWC44967.1\|2125392_2127141_-\|type-I-B-CRISPR-associated-protein-Cas8b1/Cst1	gnl\|CDD\|187796	cd09665, Cas8a1_I-A, CRISPR/Cas system-associated protein Cas8a1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins, some contain Zn-finger domain; signature gene for I-A subtype; also known as CXXC_CXXC family.	1.471e-10
CP024109.1\|AWC44964.1\|2121532_2123758_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|273707	TIGR01587, CRISPR-associated_endonuclease/helicase_Cas3, CRISPR-associated helicase Cas3. This model represents the highly conserved core region of an alignment of Cas3, a protein found in association with CRISPR repeat elements in a broad range of bacteria and archaea. Cas3 appears to be a helicase, with regions found by pfam00270 (DEAD/DEAH box helicase) and pfam00271 (Helicase conserved C-terminal domain). Some but not all members have an N-terminal HD domain region (pfam01966) that is not included within this model.	8.88979e-63
CP024109.1\|AWC44962.1\|2119728_2119992_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	2.02502e-27
CP024109.1\|AWC44974.1\|2133029_2133353_-\|PadR-family-transcriptional-regulator	gnl\|CDD\|163261	TIGR03433, padR_acidobact, transcriptional regulator, Acidobacterial, PadR-family. Members of this protein family are putative transcriptional regulators of the PadR family, as found in species of the Acidobacteria. This family of proteins has expanded greatly in this lineage, and where it regularly is found in the vicinity of a putative transporter protein [Regulatory functions, DNA interactions].	5.02854e-08
CP024109.1\|AWC44961.1\|2117600_2117984_-\|VOC-family-protein	gnl\|CDD\|319924	cd07263, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC domain is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.	1.51641e-44
CP024109.1\|AWC44969.1\|2129627_2129954_-\|antibiotic-biosynthesis-monooxygenase	gnl\|CDD\|225209	COG2329, COG2329, Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides [General function prediction only].	5.76195e-19
CP024109.1\|AWC44965.1\|2123811_2124510_-\|type-I-B-CRISPR-associated-protein-Cas5	gnl\|CDD\|187789	cd09658, Cas5_I-B, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	2.84624e-29
CP024109.1\|AWC44978.1\|2136219_2137260_-\|NAD-dependent-dehydratase	gnl\|CDD\|187575	cd05265, SDR_a1, atypical (a) SDRs, subgroup 1. Atypical SDRs in this subgroup are poorly defined and have been identified putatively as isoflavones reductase, sugar dehydratase, mRNA binding protein etc. Atypical SDRs are distinct from classical SDRs. Members of this subgroup retain the canonical active site triad (though not the upstream Asn found in most SDRs) but have an unusual putative glycine-rich NAD(P)-binding motif, GGXXXXG, in the usual location. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	4.42697e-86

>CP024109.1|AWC44968.1|2127140_2127842_-|CRISPR-associated-endoribonuclease-Cas6
MRLHIKLQTNRFPISYRMMMVSFIKEALKLSDAAYFQQIYQESKANRPFSYGVYIHDYKLNATEFHIKGYVGLTITSPDAQFMLHFYNGLMKMNDFRYKGFSLKRMKVQMVNSADINQNHVYFKTLSPLLIRDKHAKPIFIDDDKFEKELNYISDTVLKEFRGYGLKQPLIFTSKNMKKVVVKEKIHSDHDTLFFTGYHGIFSLQGAVEDLKILSEIGLGFRSSQGFGAVEVV
>CP024109.1|AWC44967.1|2125392_2127141_-|type-I-B-CRISPR-associated-protein-Cas8b1/Cst1
MIFVTEEIPLAAEEWTITQGLVGYYRILKHAGIKVKTTDEGILFNPEHLRNFEHYYFDYFLDRFSVAKRDEQNIRRTFLKFRAESESKGSKEAKRRMQAAKKSLDETIKKTAIEKVEKKFEDSSHKKRLVEYATLIRNQKTYNPEMDKWIEEYIQALSEPNINEKLTLNYFKATVLGTYFGQVSFLNVSHTSKDIEEQKEIFRKDYIESLLADLELQQMIARAEDSDEIMKYLEISTHEMAKKLKTKFKKMTIQQIKDYVSNEINCCSFFDSQWAFEQYSELHFSPLSMSASKALNFYWNANGTLTIPVSKLAKLILFCAPAGASIIGGKSLFVQREGRFEQVIYANETYEIGRSKDKAFDEIIFDLIAEQKTKAQHTGDSYLILEYSSEYNAKKTDLQYLHLTPGLCSFFKEKNCTKWFSRLNYVLRNQIVHAFLRYQDSKHIIHNALRKKLQEQKLANEIVYACLLRCYYLFFVKGEGKMNTDLKTSKNRIWSAFYEGVAIKNIVEEGKIRSVAYRLLNAIRSNDKKMFLDTVMRLYMSVEKPFPRVFMNILDESNIDFASIGDSFIAGLISKEEEKINE
>CP024109.1|AWC44966.1|2124506_2125400_-|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR
MNNKALTLTIIFKASSLNYGEGTANISELKKFHRGNGEVYSFASRQAIRYDIVRLGNQLFNWNLNVVDKSKGVVQFKDDCTIADSVEMDLFGYMKTKAKAGADKRSAVVRLSHAVSLEPYRSDLEFLNNMGLASRIQENPNLATLEQHESLYTYTLTVDLSKVGVDGEIELPVDEKVNRVKQLIELTKYLNREIRGRQENLSPLFVIGGVYPIANPFFLGRISLQNFDSNLLNVKSLASVLGQTVLGHDVRTCTKIGLVDGVFANEEEISQLTDTVSVEEFYQHVMNEVEQFYKVLV
>CP024109.1|AWC44965.1|2123811_2124510_-|type-I-B-CRISPR-associated-protein-Cas5
MKVIRLKLFQETACYTKPFANKVAETYPLPPYSTVKGMIHQLLQANELLPLRFSIQGNYETKLIDYRKSYMVKKKSVSMPIIFDGLAMEVPEQEHMTSMPLYTHMLFNVELVIHIAGEEALLERIYQHFIELNQHLSLGRHEDLVRVDEVTFVELEECDEWYSKYAIYVPKYYYKTDFPAGIPYRLNWTYKIVNGIREWNKIPSLYVNGNNPHFEDGKLFHTDGEHIVLWNE
>CP024109.1|AWC44964.1|2121532_2123758_-|CRISPR-associated-helicase/endonuclease-Cas3
MFLAKSNPKETLREHTDELRSRYKKLKESYGHYFDERIWELLLYAVDYHDAGKAHEPFQLNIRRALGEGVKLQRNLEVPHNYLSPFLLPESIFSLPKKDYQALIQAIAYHHERDIEPNDTLIRQALWQDLWPKMDEINKHLNINGANLEKKFNRILAQLHRRIKYSDNKENYVDYVILKGLLHRIDHAASAHVDIEIDAKQDFKKLVDAGFQKIAEKKRVPVEEVYRDLQKHAHKHRKENLIIVAQTGMGKTEAALLWASDSKTFFTLPLRVSINALFHRVYEKMNYKNVGLLHSSSMDYLTENLEEDWEVIAEQSKHFSSKLLFTTIDQILKFPFLYRGYEKELATMAYSSVVIDEIQAYDPKIAAVLVRALEMIYLVGGKFLLMTATLPSIYLETLNESDIISSDGFRVDTFIDDCVIRHCIEVVEKPIVDDFEKIVDLGKQKKILVIANTVKRAMELYNKIKEYSDNVHVFHSMYIQKHRTLIEKELLLFDENKEATGIWITTQLVEASIDIDFDVLFTEAATLDSLCQRFGRCYRRRQYMMHQEPNVFIYAVDMSGVKYVYDEEILMKSLDILRPFNRKILLESQKIELVSQLYSRENLKGTEFLKTFDDALEQLQTFEDYTLSSKDAQKLLRDIQAELVIPRNIYDENEHLFEQLKIVNKEERARLYREIAKLTVSLRKNRVRGKTSRIPHERIQSNGKKYNLLPWIKILELQYDFDEKSKTGTGVLLDQELDNFI
>CP024109.1|AWC44963.1|2120972_2121470_-|CRISPR-associated-protein-Cas4
MKGTYIHYYFVCHRKLWLFVHQIQLEKESERVIEGKILHDSTYQRMEHRELDIDGVGKIDEIEGEYIREIKLTSKMQEADRWQLLYYLAELKKRGVTKKGLLSYKKEKRTEEVHLTEANQQELENIQKRIQAIILSDKPPKLEKKKYCSSCAYYDFCFSGEGEGC
>CP024109.1|AWC44962.1|2119728_2119992_-|CRISPR-associated-endonuclease-Cas2
MFVIITYDIGEKRVGKACKKLKQYLTWTQNSVFEGELSRTQLLKCLAELDQIIISSEDSIYLYEVNNPRNIKKKVFGIEKSYEELFL
>CP024109.1|AWC44961.1|2117600_2117984_-|VOC-family-protein
MMIHKVGQIMLYVKDQDEAVQFWTEKMGFHLIAEEDNGKGFRWIEIAPTKEAETSIVLHNKEFIAKMQPELNLNTPSMLFFTENIEQLHKQLVDKKVEVGEIVNMPTGKAFNFADDEGNYFAIMEKS
>CP024109.1|AWC44960.1|2115964_2117359_-|D-serine-ammonia-lyase
MQIPMLMNRKIEAFGGGNDMWEKMIKGKTIRKWTEENPILRQLIETSEVFWENPNYSSYEKARQDFVLTTEDVKEAEARLLRFAPYIAKVFPETKEMDGIIESPLVETMHMKQYLEDAFAQEMPGRFLLKCDNNLPISGSIKARGGIYEVLQHAEKLAIEHNLLCEEDHYAKLDSDRFREFFSQYSIAVGSTGNLGLSIGIMSAKLGFQVTVHMSADAKEWKKELLRNKGVTVVEYESDYSKAVEEGRKQAEQDPHCYFIDDENSKHLFLGYAVAASRVKQQLEDKNIRVDKDHPLFVYLPCGVGGGPGGVAFGLKLLFGDAVHCFFAEPTHSPCMLLGLVTGLHDEIAVQDFEIDNVTEADGLAVGRASGFVGKIMEPLLSGCYTVEDQQLYELLKAMVDTENIRLEPSALAAVYGPVQLYRQENYVKRHKLEGKMNRSTHMMWATGGGMVPKSVFDEYYQNQ
>CP024109.1|AWC44959.1|2115480_2115918_+|DUF2512-domain-containing-protein
MSDIALVLIKFISCIIAFAIGLALFFPATLVQIISFSLFVTIISYVFVDKIILERIGRSAAIMTDFLLTYLSVWIFGNILLDHYMQIAWGSILSALVFTLCEVIVQRFSHAHERHNSDNIHLNRRFSYGTEFAEEQNPLDKNKKK
>CP024109.1|AWC44969.1|2129627_2129954_-|antibiotic-biosynthesis-monooxygenase
MFIETKTLTVKEGTSDLVVQRFSGEGMIEKFEGFIDLNVLVKKVRRGDEEVVIMIRWESEEAWKNWETSEEHLAGHRANRGKPKPEHILNAEHAVYYVKATKSAYQQS
>CP024109.1|AWC44970.1|2130295_2130640_+|hypothetical-protein
MRKAILIFIVAIFIIGIVHIAVTPINYKSYTIEALWFASAGCTLIFLAFLNYVLISIKQRQTRFFVICHTANILCTILVAFILTIAFAPHIILLFVLLVSKTLLVIGFQFSSKS
>CP024109.1|AWC44971.1|2131072_2131639_-|N-acetyltransferase
MGFPTLETERFILRELTLLDAENMFHYFQKESVMRYFGMDAIRNMEQVKRMIQMFSKKYKEGSQVRWGIELKGTNRFIGTCGFHFINLNHKRAEIGYELDDAYWGKGYATEAVQTIVTYAFQTMKLIRIGAVVYKENEASHKLLKKIGFQKEGLLRKYMIQNNVEYDTIIYSLLAEDWEKRSCLSIKY
>CP024109.1|AWC44972.1|2132008_2132254_+|DNA-alkylation-repair-protein
MEPMLCPNCKTNRTRFNILEQQVKPVKLNPQTGQIEEEYTNETLNVFHMSYQGPTYRVQCAVCGLVENPEQFIKPAQNKLF
>CP024109.1|AWC44973.1|2132491_2133028_-|DUF2812-domain-containing-protein
MEIKKTFKFFTAWNLEKEEAYLREMHQKGWAFQKYHFMYTFKKTEPKDVVYKADFNFDFQKSLKNQREYLEIYEMSGWKYVSSFTKWHYFCKEVVDKNELPDIYSETETRIEKLKDLLNHLVIIFLSILPAISISCLESPANKLSIIIKGFIGFVVCIHMYMFVRLILKIRKLKKEII
>CP024109.1|AWC44974.1|2133029_2133353_-|PadR-family-transcriptional-regulator
MDEKAKKYIPLTEATYYILLSFAKRIHGYGVMQMVEEMTDGEVKLGPGTLYGNITKLLTEKLIVEVDSTDRKKCYMLTPFGREVLELEFKRLQRSVQNGKQILREKM
>CP024109.1|AWC44975.1|2133954_2134938_-|DUF4003-domain-containing-protein
MITLQQKLEQYTSIYKQLKRELKWKTSDSRTGMMIAAMYTSSDKPFDLERFLQISHYIKSQVGMFSYLKSYHRFVVAATLDIHFTHYKTAFQQFLDLYERFIASGFSRSIFTYLAAATLLPDDREQYEARIQRSVKVYKRMKEDHFFLTSTSDYPLAVLLAGQQEEIGPLMDRVERLYQKLATSGLRKGNALQFLSHILSLKKDIREDMLVARCTNIWNLFKQEKVKVKQMHYPAIGLLALLEDGEKEVSSIRTFMEKLQGDKLFRWQTDTNILIAIQLFVSQKGMEHQAANTGLQTMIEILIQAQQAAVIAAISASTAATSASSNS
>CP024109.1|AWC44976.1|2135018_2135486_-|NUDIX-domain-containing-protein
MDLTFQVNQSCFNYRVGAICKHDNKILMLQNEGEDFWYVPGGRVQLLETSEVAIKRELKEELGVDVAVKRPLWIVENFFTYDSRQFHEISLYYEVNLLTLPVKGADSFLFEEEGRKYKFQWIPLEQICEYNVKPEFLKDKMTQLPLHVEHIVKNQ
>CP024109.1|AWC44977.1|2135844_2136090_-|hypothetical-protein
MKGIFWLNLYMSLHVRMGETLYYGLGVRITNSHSEEKVIRHSGLTPNSHAKMFFIPKTDWGGVILTNKNHIFEEEALPQLK
>CP024109.1|AWC44978.1|2136219_2137260_-|NAD-dependent-dehydratase
MKVLILGGTRFLGRALVEEALKRGHEVTLFNRGTNKEIFPKVEQLIGDRDGDVSALKNRNWDIVMDTCGFAPHQIRNIATILGGNIEHYTFISSMSTYKDWIPLHIKEDYQLQSIPPREKLKAIEDGEASPYEYYGGLKVLCEKEAEKYWPGRVLHMRAGLLVGAFDYTDRLPYWIQRVAQGGEVLVPEHSNRPVQLIDVKDVATWAFNMAEGRKVGTFNVTGPNNELTIGELLNTCKAVTNSDAEFVWVEEQFLLENKVQPWTEMPLWIPETFPLEGETEPWKGSFFISIEKAVNAGLSFRPIQNTISDVYQWEKSRKDTERKAGMAREKERELLKLWFQQEKMR

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP024109_3	3.2\|2128882\|37\|CP024109\|CRISPRCasFinder,CRT	2128882-2128918	37	NZ_CP007513	Bacillus bombysepticus plasmid pBb, complete genome	248075-248111	5	0.865
CP024109_3	3.9\|2128883\|37\|CP024109\|PILER-CR	2128883-2128919	37	NZ_CP007513	Bacillus bombysepticus plasmid pBb, complete genome	248075-248111	5	0.865
CP024109_3	3.6\|2129144\|37\|CP024109\|CRISPRCasFinder,CRT	2129144-2129180	37	NC_025146	Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111	92131-92167	8	0.784
CP024109_3	3.13\|2129145\|37\|CP024109\|PILER-CR	2129145-2129181	37	NC_025146	Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111	92131-92167	8	0.784
CP024109_3	3.4\|2129013\|36\|CP024109\|CRISPRCasFinder,CRT	2129013-2129048	36	NZ_CP026684	Nostoc sp. 'Peltigera membranacea cyanobiont' N6 plasmid pNPM2, complete sequence	126541-126576	11	0.694
CP024109_3	3.11\|2129014\|36\|CP024109\|PILER-CR	2129014-2129049	36	NZ_CP026684	Nostoc sp. 'Peltigera membranacea cyanobiont' N6 plasmid pNPM2, complete sequence	126541-126576	11	0.694

1. spacer 3.2|2128882|37|CP024109|CRISPRCasFinder,CRT matches to NZ_CP007513 (Bacillus bombysepticus plasmid pBb, complete genome) position: , mismatch: 5, identity: 0.865

tgggacaaacatgctactttcttgaacgctcagtcaa-	CRISPR spacer
tgggacaaacatgctacttttttaaa-gcccaatcaag	Protospacer
********************.**.** **.**.****

2. spacer 3.9|2128883|37|CP024109|PILER-CR matches to NZ_CP007513 (Bacillus bombysepticus plasmid pBb, complete genome) position: , mismatch: 5, identity: 0.865

tgggacaaacatgctactttcttgaacgctcagtcaa-	CRISPR spacer
tgggacaaacatgctacttttttaaa-gcccaatcaag	Protospacer
********************.**.** **.**.****

3. spacer 3.6|2129144|37|CP024109|CRISPRCasFinder,CRT matches to NC_025146 (Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111) position: , mismatch: 8, identity: 0.784

tgaacc---atttttcaataatcaatattcctttcttaag	CRISPR spacer
---actttaatttttcaaaaattaatattcctttcttatt	Protospacer
   **.   ********* ***.***************

4. spacer 3.13|2129145|37|CP024109|PILER-CR matches to NC_025146 (Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111) position: , mismatch: 8, identity: 0.784

tgaacc---atttttcaataatcaatattcctttcttaag	CRISPR spacer
---actttaatttttcaaaaattaatattcctttcttatt	Protospacer
   **.   ********* ***.***************

5. spacer 3.4|2129013|36|CP024109|CRISPRCasFinder,CRT matches to NZ_CP026684 (Nostoc sp. 'Peltigera membranacea cyanobiont' N6 plasmid pNPM2, complete sequence) position: , mismatch: 11, identity: 0.694

ccgtgttggtggcgttggtggtgcattgcaaaccgt	CRISPR spacer
agactttggtggtgttggaggtgcattgcaaaaaca	Protospacer
  .. *******.***** *************

6. spacer 3.11|2129014|36|CP024109|PILER-CR matches to NZ_CP026684 (Nostoc sp. 'Peltigera membranacea cyanobiont' N6 plasmid pNPM2, complete sequence) position: , mismatch: 11, identity: 0.694

ccgtgttggtggcgttggtggtgcattgcaaaccgt	CRISPR spacer
agactttggtggtgttggaggtgcattgcaaaaaca	Protospacer
  .. *******.***** *************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

268952 : 276931

uncultured_virus(33.33%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWC43364.1\|268952_269237_+	co-chaperone GroES	A0A221S3C8	uncultured_virus	5.8e-20	52.7
AWC43365.1\|269271_270900_+	molecular chaperone GroEL	A0A219YK78	uncultured_virus	1.5e-157	56.9
AWC43366.1\|271326_272874_+	glutamine-hydrolyzing GMP synthase	A0A1V0SH76	Hokovirus	2.2e-20	30.6
AWC43367.1\|273247_274573_+	NCS2 family permease	A0A0R6PHV4	Moraxella_phage	2.9e-45	31.6
AWC46811.1\|274716_275418_+	DNA-binding response regulator	W8CYM9	Bacillus_phage	8.6e-41	38.7
AWC46810.1\|275443_276931_+	sensor histidine kinase	W8CYF6	Bacillus_phage	2.8e-33	30.4

DBSCAN-SWA_2

302412 : 310784

Synechococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWC43377.1\|302412_303714_+	adenylosuccinate lyase	A0A1B3B081	Gordonia_phage	2.0e-19	31.6
AWC43378.1\|303808_304528_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	G8EYA2	Synechococcus_phage	9.8e-48	43.9
AWC43379.1\|304520_304775_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA
AWC43380.1\|304771_305455_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA
AWC43381.1\|305438_307658_+	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	1.5e-160	41.3
AWC43382.1\|307642_309058_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	8.1e-54	35.2
AWC43383.1\|309160_310204_+	phosphoribosylformylglycinamidine cyclo-ligase	Q58MH8	Prochlorococcus_phage	2.7e-70	48.0
AWC43384.1\|310196_310784_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	1.6e-24	34.2

DBSCAN-SWA_3

1036095 : 1102246

Escherichia_phage(22.22%)

bacteriocin,integrase,coat

attL 1075855:1075882|attR 1104868:1104895

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWC43986.1\|1036095_1036671_-\|coat	spore coat protein	NA	NA	NA	NA
AWC43987.1\|1036792_1037152_+	DUF1360 domain-containing protein	NA	NA	NA	NA
AWC46830.1\|1037276_1037435_+	cytochrome C oxidase subunit III	NA	NA	NA	NA
AWC46831.1\|1037501_1038437_-	glycosyl transferase family 2	NA	NA	NA	NA
AWC43988.1\|1038459_1039215_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
AWC43989.1\|1044100_1044781_+	streptomycin biosynthesis protein StrF	NA	NA	NA	NA
AWC43990.1\|1044857_1045595_+\|coat	spore coat protein	I7I009	Enterobacteria_phage	2.8e-50	44.7
AWC43991.1\|1045603_1046152_+	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A218MN57	uncultured_virus	1.7e-31	43.2
AWC43992.1\|1046163_1047135_+	dTDP-glucose 4,6-dehydratase	A0A1D7XFE8	Escherichia_phage	8.5e-71	42.9
AWC43993.1\|1047146_1047998_+	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	9.5e-42	40.2
AWC43994.1\|1048200_1048701_-	hypothetical protein	NA	NA	NA	NA
AWC43995.1\|1049136_1049610_-\|coat	spore coat protein	NA	NA	NA	NA
AWC43996.1\|1049776_1051831_-	ATP-dependent helicase	S5MMD7	Bacillus_phage	6.2e-79	31.9
AWC43997.1\|1052356_1052875_-	hypothetical protein	NA	NA	NA	NA
AWC43998.1\|1052967_1053699_-	esterase family protein	NA	NA	NA	NA
AWC43999.1\|1053919_1054831_+	EamA/RhaT family transporter	NA	NA	NA	NA
AWC44000.1\|1055051_1055441_-	hypothetical protein	A0A0E3TB73	Enterococcus_phage	6.3e-09	36.6
AWC44001.1\|1055612_1057079_-	sodium/proline symporter PutP	NA	NA	NA	NA
AWC44002.1\|1058911_1060405_+	lactate permease	NA	NA	NA	NA
AWC44003.1\|1060509_1061193_+	DUF2278 domain-containing protein	NA	NA	NA	NA
AWC44004.1\|1061239_1062073_-	hypothetical protein	NA	NA	NA	NA
AWC44005.1\|1062201_1062948_+	zinc ribbon domain-containing protein	NA	NA	NA	NA
AWC44006.1\|1063122_1064457_+	CoA-disulfide reductase	NA	NA	NA	NA
AWC44007.1\|1064585_1064996_+	DUF3908 domain-containing protein	NA	NA	NA	NA
AWC44008.1\|1065209_1066754_-	NADH oxidase	NA	NA	NA	NA
AWC44009.1\|1066814_1068767_-\|bacteriocin	bacteriocin biosynthesis protein SagD	NA	NA	NA	NA
AWC44010.1\|1068760_1070686_-\|bacteriocin	putative thiazole-containing bacteriocin maturation protein	NA	NA	NA	NA
AWC44011.1\|1070844_1072089_-	dihydrolipoyllysine-residue succinyltransferase	NA	NA	NA	NA
AWC44012.1\|1072209_1075086_-	2-oxoglutarate dehydrogenase subunit E1	NA	NA	NA	NA
1075855:1075882	attL	NA	NA	NA	NA
AWC44013.1\|1076053_1076236_+	DUF3976 domain-containing protein	NA	NA	NA	NA
AWC44014.1\|1076297_1077182_-	LysR family transcriptional regulator	NA	NA	NA	NA
AWC44015.1\|1077368_1078295_+	2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase	NA	NA	NA	NA
AWC44016.1\|1078364_1079888_+	5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase	NA	NA	NA	NA
AWC44017.1\|1079941_1081414_+	4-hydroxyphenylacetate 3-monooxygenase, oxygenase component	NA	NA	NA	NA
AWC44018.1\|1081433_1082417_+	3,4-dihydroxyphenylacetate 2,3-dioxygenase	NA	NA	NA	NA
AWC44019.1\|1082474_1083341_+	cytidyltransferase	NA	NA	NA	NA
AWC44020.1\|1083401_1083731_+	DUF485 domain-containing protein	NA	NA	NA	NA
AWC44021.1\|1083720_1085271_+	cation acetate symporter	NA	NA	NA	NA
AWC44022.1\|1085291_1086083_+	4-hydroxyphenylacetate isomerase	NA	NA	NA	NA
AWC44023.1\|1086079_1086838_+	2-hydroxyhepta-2,4-diene-1,7-dioate isomerase	NA	NA	NA	NA
AWC44024.1\|1086910_1087309_+	5-carboxymethyl-2-hydroxymuconate isomerase	NA	NA	NA	NA
AWC44025.1\|1087627_1088740_+	tetratricopeptide repeat-containing protein	A0A2H4J8G3	uncultured_Caudovirales_phage	2.4e-93	49.1
AWC44026.1\|1089390_1089759_+	NUDIX domain-containing protein	NA	NA	NA	NA
AWC44027.1\|1090583_1090790_+	hypothetical protein	NA	NA	NA	NA
AWC44028.1\|1091440_1091758_+	DUF3884 domain-containing protein	NA	NA	NA	NA
AWC44029.1\|1093815_1094223_+	hypothetical protein	NA	NA	NA	NA
AWC44030.1\|1097523_1097901_-	hypothetical protein	NA	NA	NA	NA
AWC44031.1\|1097917_1098178_-	hypothetical protein	NA	NA	NA	NA
AWC44032.1\|1098313_1098568_+	hypothetical protein	NA	NA	NA	NA
AWC44033.1\|1099074_1099728_+	hypothetical protein	NA	NA	NA	NA
AWC44034.1\|1099925_1100201_+	hypothetical protein	NA	NA	NA	NA
AWC44035.1\|1100518_1101613_-	tetratricopeptide repeat-containing protein	A0A2H4J8G3	uncultured_Caudovirales_phage	1.2e-100	51.8
AWC44036.1\|1101874_1102246_+\|integrase	site-specific integrase	A0A1B0T6A8	Bacillus_phage	2.1e-25	54.4
1104868:1104895	attR	NA	NA	NA	NA

DBSCAN-SWA_4

2637527 : 2711495

Bacillus_phage(77.78%)

capsid,head,holin,protease,tail,tRNA,portal,integrase,terminase

attL 2669070:2669087|attR 2718216:2718233

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWC45417.1\|2637527_2640293_-\|tRNA	isoleucine--tRNA ligase	A0A2K9L9X8	Tupanvirus	2.8e-87	27.3
AWC45418.1\|2640637_2641144_-	septum formation initiator	NA	NA	NA	NA
AWC45419.1\|2641236_2642010_-	RNA-binding protein	NA	NA	NA	NA
AWC45420.1\|2642024_2642288_-	YggT family protein	NA	NA	NA	NA
AWC45421.1\|2642294_2642765_-	cell division protein SepF	NA	NA	NA	NA
AWC45422.1\|2642783_2643458_-	YggS family pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA
AWC45423.1\|2643464_2644274_-	laccase domain-containing protein	NA	NA	NA	NA
AWC45424.1\|2644391_2644670_-	YlmC/YmxH family sporulation protein	NA	NA	NA	NA
AWC45425.1\|2644933_2645713_-	RNA polymerase sporulation sigma factor SigG	A0A0Y0AU18	Bacillus_phage	3.4e-46	43.4
AWC45426.1\|2645904_2646624_-	RNA polymerase sporulation sigma factor SigE	A0A2H4JC68	uncultured_Caudovirales_phage	2.5e-19	42.9
AWC45427.1\|2646643_2647570_-	sigma-E processing peptidase SpoIIGA	NA	NA	NA	NA
AWC45428.1\|2647785_2648940_-	cell division protein FtsZ	NA	NA	NA	NA
AWC45429.1\|2648979_2650284_-	cell division protein FtsA	NA	NA	NA	NA
AWC45430.1\|2650684_2651452_-	cell division protein DivIB	NA	NA	NA	NA
AWC46902.1\|2651549_2652455_-	UDP-N-acetylenolpyruvoylglucosamine reductase	NA	NA	NA	NA
AWC45431.1\|2652515_2653610_-	undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase	NA	NA	NA	NA
AWC46903.1\|2653794_2654886_-	stage V sporulation protein E	NA	NA	NA	NA
AWC45432.1\|2654977_2656333_-	UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase	NA	NA	NA	NA
AWC45433.1\|2656333_2657308_-	phospho-N-acetylmuramoyl-pentapeptide- transferase	NA	NA	NA	NA
AWC45434.1\|2657330_2658806_-	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase	NA	NA	NA	NA
AWC45435.1\|2659078_2660995_-	stage V sporulation protein D	NA	NA	NA	NA
AWC46904.1\|2661092_2663243_-	dihydropteridine reductase	NA	NA	NA	NA
AWC45436.1\|2663265_2663622_-	cell division protein FtsL	NA	NA	NA	NA
AWC45437.1\|2663637_2664570_-	ribosomal RNA small subunit methyltransferase H	NA	NA	NA	NA
AWC46905.1\|2664933_2666550_-	bacillithiol biosynthesis cysteine-adding enzyme BshC	NA	NA	NA	NA
AWC46906.1\|2666629_2667514_-	2-dehydropantoate 2-reductase	NA	NA	NA	NA
AWC45438.1\|2667815_2668289_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
AWC45439.1\|2668384_2668906_-	RsfA family transcriptional regulator	G3MB11	Bacillus_virus	4.0e-11	47.8
2669070:2669087	attL	NA	NA	NA	NA
AWC45440.1\|2669165_2669339_-	50S ribosomal protein L32	NA	NA	NA	NA
AWC45441.1\|2669400_2669901_-	hypothetical protein	NA	NA	NA	NA
AWC45442.1\|2670182_2670803_-	hypothetical protein	Q2LIA9	Bacillus_phage	1.0e-85	76.8
AWC45443.1\|2670744_2671926_-	cell division protein FtsK	Q3HKZ7	Bacillus_phage	3.0e-195	84.5
AWC45444.1\|2672043_2672226_-	hypothetical protein	Q2I8E2	Bacillus_phage	2.2e-20	88.3
AWC45445.1\|2672222_2672531_-	hypothetical protein	A0A288WG08	Bacillus_phage	3.8e-41	78.4
AWC45446.1\|2672714_2672924_+	XRE family transcriptional regulator	Q2I8E4	Bacillus_phage	2.7e-22	79.4
AWC45447.1\|2672926_2673415_+	hypothetical protein	Q3HL01	Bacillus_phage	8.1e-46	61.7
AWC45448.1\|2673450_2674515_-	N-acetylmuramoyl-L-alanine amidase	A0A0A7AQV3	Bacillus_phage	2.3e-178	85.9
AWC45449.1\|2674511_2674751_-\|holin	holin	A0A2H4J378	uncultured_Caudovirales_phage	1.2e-29	87.3
AWC45450.1\|2674750_2674987_-	hypothetical protein	A0A2H4J382	uncultured_Caudovirales_phage	1.2e-07	78.2
AWC45451.1\|2675028_2679060_-	peptidase S74	H0USX5	Bacillus_phage	1.7e-242	44.9
AWC45452.1\|2679056_2680550_-\|tail	phage tail protein	A0A2H4JC38	uncultured_Caudovirales_phage	1.2e-254	83.7
AWC45453.1\|2680558_2684599_-\|tail	phage tail tape measure protein	H0USX3	Bacillus_phage	0.0e+00	75.1
AWC45454.1\|2684815_2685130_-	hypothetical protein	A0A288WFU6	Bacillus_phage	1.8e-35	70.2
AWC45455.1\|2685178_2685790_-\|tail	phage tail protein	A0A2H4J8F3	uncultured_Caudovirales_phage	8.4e-101	94.5
AWC45456.1\|2685790_2686150_-	DUF3168 domain-containing protein	A0A0S2GLE3	Bacillus_phage	1.4e-55	90.8
AWC45457.1\|2686146_2686581_-	hypothetical protein	A0A288WGB7	Bacillus_phage	8.2e-66	84.9
AWC45458.1\|2686573_2686897_-\|head,tail	head-tail adaptor protein	A0A288WG18	Bacillus_phage	8.0e-50	85.0
AWC45459.1\|2686893_2687184_-\|head,tail	phage gp6-like head-tail connector protein	A0A288WGQ6	Bacillus_phage	3.6e-41	88.5
AWC45460.1\|2687201_2688377_-\|capsid	phage major capsid protein	A0A288WG01	Bacillus_phage	2.5e-186	88.0
AWC46907.1\|2688418_2688991_-\|head,protease	HK97 family phage prohead protease	Q2I8F8	Bacillus_phage	1.3e-95	91.1
AWC45461.1\|2688980_2690291_-\|portal	phage portal protein	Q2LIC9	Bacillus_phage	6.4e-215	89.2
AWC45462.1\|2690306_2692004_-\|terminase	terminase large subunit	A0A288WFW5	Bacillus_phage	0.0e+00	91.7
AWC45463.1\|2692000_2692483_-\|terminase	phage terminase small subunit P27 family	Q2I8G1	Bacillus_phage	1.4e-74	92.5
AWC45464.1\|2692582_2692966_-	HNH endonuclease	Q2I8B2	Bacillus_phage	2.2e-62	90.6
AWC45465.1\|2693031_2693271_-	hypothetical protein	NA	NA	NA	NA
AWC45466.1\|2693937_2694192_-	hypothetical protein	A0A288WG25	Bacillus_phage	2.5e-30	73.8
AWC45467.1\|2694211_2694403_-	hypothetical protein	A0A288WFV5	Bacillus_phage	1.7e-23	88.9
AWC45468.1\|2694408_2694627_-	hypothetical protein	D2XR60	Bacillus_phage	3.3e-23	73.6
AWC45469.1\|2694921_2695299_-	ArpU family transcriptional regulator	Q9ZXB9	Bacillus_phage	1.0e-16	39.7
AWC46908.1\|2695356_2695677_-	hypothetical protein	NA	NA	NA	NA
AWC46909.1\|2695717_2695945_-	hypothetical protein	A0A288WFX6	Bacillus_phage	2.2e-22	68.0
AWC45470.1\|2695990_2696536_-	hypothetical protein	A0A1I9S5V4	Bacillus_phage	3.5e-66	78.0
AWC45471.1\|2696596_2696860_-	hypothetical protein	NA	NA	NA	NA
AWC45472.1\|2697620_2698019_-	hypothetical protein	NA	NA	NA	NA
AWC45473.1\|2698027_2698918_-	zinc-finger domain-containing protein	NA	NA	NA	NA
AWC45474.1\|2698988_2699699_-	2-methylcitrate dehydratase	NA	NA	NA	NA
AWC45475.1\|2699718_2700132_-	DUF1064 domain-containing protein	A0A2P1JTY5	Anoxybacillus_phage	1.2e-34	58.5
AWC45476.1\|2700124_2700619_-	deoxyuridine 5'-triphosphate nucleotidohydrolase	A0A1B1P8C0	Bacillus_phage	3.2e-58	70.6
AWC45477.1\|2700835_2701288_-	MFS transporter	A0A0A7AQW3	Bacillus_phage	3.3e-33	43.4
AWC45478.1\|2701302_2701785_-	hypothetical protein	NA	NA	NA	NA
AWC45479.1\|2701765_2701960_-	hypothetical protein	NA	NA	NA	NA
AWC46910.1\|2701965_2702658_-	DNA replication protein	A0A0S2GLK2	Bacillus_phage	7.9e-63	50.6
AWC45480.1\|2702728_2703694_-	DnaD domain protein	H0USU2	Bacillus_phage	9.7e-43	51.9
AWC45481.1\|2703868_2704675_-	recombinase RecT	S6AVW6	Thermus_phage	3.4e-97	66.9
AWC45482.1\|2704674_2704914_-	hypothetical protein	NA	NA	NA	NA
AWC45483.1\|2704928_2705864_-	hypothetical protein	S6C475	Thermus_phage	1.9e-99	59.5
AWC45484.1\|2705945_2706161_-	hypothetical protein	NA	NA	NA	NA
AWC46911.1\|2706336_2706630_-	hypothetical protein	A0A0S2GLB6	Bacillus_phage	1.7e-27	62.4
AWC45485.1\|2706637_2706958_-	hypothetical protein	NA	NA	NA	NA
AWC45486.1\|2707105_2707315_-	DNA-binding protein	A0A0U4IIS1	Bacillus_phage	4.4e-09	50.9
AWC46912.1\|2707437_2707647_-	XRE family transcriptional regulator	NA	NA	NA	NA
AWC45487.1\|2707812_2708151_+	XRE family transcriptional regulator	H0UST7	Bacillus_phage	1.3e-21	53.3
AWC45488.1\|2708432_2708567_-	hypothetical protein	NA	NA	NA	NA
AWC45489.1\|2708580_2709678_-	hypothetical protein	NA	NA	NA	NA
AWC45490.1\|2710364_2711495_+\|integrase	site-specific integrase	A0A0U4JNS1	Bacillus_phage	1.7e-62	37.4
2718216:2718233	attR	NA	NA	NA	NA

DBSCAN-SWA_5

2981625 : 3017039

Bacillus_phage(87.18%)

head,holin,tail,portal,terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWC45787.1\|2981625_2982198_+	DUF4352 domain-containing protein	A0A1B1P898	Bacillus_phage	1.5e-54	84.9
AWC45788.1\|2982509_2982950_+	hypothetical protein	NA	NA	NA	NA
AWC45789.1\|2983024_2983846_-	N-acetylmuramoyl-L-alanine amidase	A0A0S2GLD4	Bacillus_phage	5.9e-142	85.3
AWC45790.1\|2983845_2984286_-\|holin	holin	A0A1B1P7S2	Bacillus_phage	8.3e-66	86.3
AWC46923.1\|2984297_2984603_-	hypothetical protein	A0A0S2MVE0	Bacillus_phage	1.4e-27	58.0
AWC45791.1\|2984668_2989105_-	hypothetical protein	A0A0S2MVB4	Bacillus_phage	0.0e+00	48.8
AWC45792.1\|2989101_2990595_-\|tail	phage tail protein	A0A1B1P7W7	Bacillus_phage	4.4e-228	75.5
AWC45793.1\|2990607_2993535_-\|tail	phage tail tape measure protein	A0A0A7AR36	Bacillus_phage	2.9e-183	55.7
AWC45794.1\|2993540_2993807_-	hypothetical protein	A0A0M4S6X7	Bacillus_phage	8.3e-21	60.2
AWC45795.1\|2993842_2994280_-	hypothetical protein	A0A0M4QX42	Bacillus_phage	3.6e-13	32.7
AWC45796.1\|2994325_2994958_-	hypothetical protein	A0A0M4R5F9	Bacillus_phage	5.7e-76	79.1
AWC45797.1\|2994975_2995356_-	hypothetical protein	A0A0M4RD75	Bacillus_phage	1.8e-56	83.3
AWC45798.1\|2995352_2995769_-	hypothetical protein	A0A0M4S6Z2	Bacillus_phage	2.7e-58	76.8
AWC45799.1\|2995752_2996112_-	hypothetical protein	A0A0M4S6Z9	Bacillus_phage	5.7e-49	81.2
AWC45800.1\|2996093_2996432_-	hypothetical protein	W8CYS9	Bacillus_phage	2.9e-10	39.6
AWC45801.1\|2996468_2997311_-	hypothetical protein	A0A0M5M1L4	Bacillus_phage	5.2e-117	77.7
AWC45802.1\|2997324_2997915_-	DUF4355 domain-containing protein	A0A0M3ULE7	Bacillus_phage	4.6e-19	55.8
AWC45803.1\|2997984_2999010_-\|head	phage head morphogenesis protein	A0A0M5M7Z2	Bacillus_phage	5.1e-159	84.1
AWC45804.1\|2998996_3000352_-\|portal	phage portal protein	A0A0M4S669	Bacillus_phage	3.5e-200	85.6
AWC45805.1\|3000363_3001668_-\|terminase	PBSX family phage terminase large subunit	A0A0M4R5F3	Bacillus_phage	9.5e-251	95.2
AWC45806.1\|3001654_3002086_-\|terminase	terminase small subunit	A0A0M4RU19	Bacillus_phage	6.4e-55	74.1
AWC45807.1\|3002849_3003095_-	DNA-binding protein	A0A290FZJ4	Caldibacillus_phage	5.1e-17	57.5
AWC45808.1\|3003498_3003879_-	ArpU family transcriptional regulator	A0A0M4R397	Bacillus_phage	1.1e-53	84.7
AWC45809.1\|3003883_3004171_-	hypothetical protein	A6M999	Geobacillus_virus	4.2e-34	70.2
AWC45810.1\|3004198_3004621_-	hypothetical protein	R9TLR2	Paenibacillus_phage	2.0e-21	41.3
AWC46924.1\|3004871_3005156_-	hypothetical protein	I7J4K9	Bacillus_phage	4.3e-15	48.9
AWC45811.1\|3005190_3005385_-	hypothetical protein	NA	NA	NA	NA
AWC45812.1\|3005421_3005625_-	hypothetical protein	NA	NA	NA	NA
AWC45813.1\|3005660_3005903_-	hypothetical protein	NA	NA	NA	NA
AWC45814.1\|3005950_3006496_-	hypothetical protein	A0A1I9S5V4	Bacillus_phage	3.5e-66	78.0
AWC46925.1\|3006850_3007423_-	dUTPase	A0A0A7AQI4	Bacillus_phage	1.2e-80	77.0
AWC45815.1\|3007576_3008368_-	hypothetical protein	A0A0M4RU33	Bacillus_phage	4.5e-30	42.5
AWC45816.1\|3008354_3008549_-	hypothetical protein	NA	NA	NA	NA
AWC45817.1\|3008533_3008749_-	hypothetical protein	NA	NA	NA	NA
AWC45818.1\|3008751_3008934_-	hypothetical protein	NA	NA	NA	NA
AWC46926.1\|3008960_3009743_-	hypothetical protein	U5PWH5	Bacillus_phage	2.9e-37	38.3
AWC45819.1\|3009726_3010479_-	phage replication protein	A0A0M4S6Y4	Bacillus_phage	2.1e-56	67.4
AWC45820.1\|3010479_3010749_-	hypothetical protein	A0A0M4S680	Bacillus_phage	5.3e-39	83.1
AWC45821.1\|3010745_3011585_-	hypothetical protein	Q38143	Bacillus_phage	3.1e-53	45.1
AWC45822.1\|3011796_3012684_-	hypothetical protein	S6C475	Thermus_phage	5.9e-71	49.1
AWC45823.1\|3012728_3012962_-	hypothetical protein	A0A0M4S677	Bacillus_phage	4.9e-25	80.3
AWC45824.1\|3013281_3013476_-	hypothetical protein	NA	NA	NA	NA
AWC45825.1\|3013504_3014281_-	hypothetical protein	A0A288WFS9	Bacillus_phage	2.7e-59	62.9
AWC45826.1\|3014277_3014466_-	XRE family transcriptional regulator	A0A0M3ULF9	Bacillus_phage	1.1e-22	91.4
AWC45827.1\|3014738_3015161_+	XRE family transcriptional regulator	A0A0M4QX29	Bacillus_phage	2.0e-69	97.1
AWC46927.1\|3015175_3015601_+	ImmA/IrrE family metallo-endopeptidase	A0A0M4RD70	Bacillus_phage	7.5e-72	92.2
AWC45828.1\|3015614_3017039_+	recombinase family protein	A0A1L2JY12	Aeribacillus_phage	3.0e-101	41.0

DBSCAN-SWA_6

4041335 : 4047988

uncultured_Caudovirales_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWC46759.1\|4041335_4041752_-	hypothetical protein	A0A2H4J4V0	uncultured_Caudovirales_phage	5.0e-28	46.3
AWC46760.1\|4041768_4042956_-	WXG100 family type VII secretion target	A0A2H4J389	uncultured_Caudovirales_phage	1.1e-152	69.0
AWC46761.1\|4043181_4044276_+	tetratricopeptide repeat-containing protein	A0A2H4J8G3	uncultured_Caudovirales_phage	2.3e-125	63.1
AWC46762.1\|4044272_4044497_+	Phr family secreted Rap phosphatase inhibitor	A0A2H4JBB8	uncultured_Caudovirales_phage	4.4e-07	48.6
AWC46763.1\|4044715_4045996_-	translation elongation factor	NA	NA	NA	NA
AWC46764.1\|4045979_4046822_-	DNA methyltransferase	A0A1S5PRR3	Streptococcus_phage	1.1e-79	52.9
AWC46765.1\|4047400_4047988_-	resolvase	A0JC18	Ralstonia_phage	1.2e-19	39.3

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP024109

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection