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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP036361 Klebsiella pneumoniae strain WCHKP2080 chromosome, complete genome 1 crisprs csa3,RT,cas3,DEDDh,DinG,WYL 0 0 12 0
CP036363 Klebsiella pneumoniae strain WCHKP2080 plasmid p1_095080, complete sequence 0 crisprs NA 0 0 0 0
CP036364 Klebsiella pneumoniae strain WCHKP2080 plasmid p2_095080, complete sequence 0 crisprs NA 0 0 0 0
CP036362 Klebsiella pneumoniae strain WCHKP2080 plasmid pKPC2_095080, complete sequence 0 crisprs RT 0 0 2 0

Results visualization

1. CP036361
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP036361_1 4596554-4596648 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 451532 : 520910 74 uncultured_Caudovirales_phage(61.11%) protease,tRNA,portal,terminase,integrase,head,capsid,tail attL 469140:469157|attR 485135:485152
DBSCAN-SWA_2 1238535 : 1264590 39 Salmonella_phage(44.12%) transposase,integrase attL 1229631:1229645|attR 1267125:1267139
DBSCAN-SWA_3 1335940 : 1445138 112 Salmonella_phage(60.0%) holin,transposase,tRNA,plate,portal,coat,lysis,terminase,head,capsid,tail NA
DBSCAN-SWA_4 1777489 : 1784394 6 Planktothrix_phage(33.33%) NA NA
DBSCAN-SWA_5 1827739 : 1839414 10 Escherichia_phage(33.33%) transposase NA
DBSCAN-SWA_6 2831719 : 2842606 9 Escherichia_phage(87.5%) NA NA
DBSCAN-SWA_7 3026008 : 3098705 86 uncultured_Caudovirales_phage(32.08%) transposase,plate,lysis,terminase,head,tail NA
DBSCAN-SWA_8 3131638 : 3185731 65 Enterobacteria_phage(33.33%) transposase,protease,holin,integrase attL 3131420:3131435|attR 3161089:3161104
DBSCAN-SWA_9 3291455 : 3379334 97 Klebsiella_phage(45.45%) holin,tRNA,portal,terminase,integrase,head,capsid,tail attL 3318258:3318272|attR 3377145:3377159
DBSCAN-SWA_10 3595313 : 3688263 95 Salmonella_phage(57.89%) protease,tRNA,plate,portal,lysis,terminase,integrase,head,capsid,tail attL 3633906:3633921|attR 3690696:3690711
DBSCAN-SWA_11 4331961 : 4343614 13 Enterobacteria_phage(70.0%) NA NA
DBSCAN-SWA_12 4813157 : 4822682 10 Enterobacteria_phage(83.33%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. CP036362
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1047 : 56257 57 Escherichia_phage(31.82%) transposase,protease NA
DBSCAN-SWA_2 62313 : 109288 52 Escherichia_phage(31.58%) transposase,integrase attL 64624:64683|attR 108251:109348
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage